BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254781174|ref|YP_003065587.1| outer membrane assembly
lipoprotein YfiO [Candidatus Liberibacter asiaticus str. psy62]
         (271 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done


Results from round 1


>gi|254781174|ref|YP_003065587.1| outer membrane assembly lipoprotein YfiO [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040851|gb|ACT57647.1| outer membrane assembly lipoprotein YfiO [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 271

 Score =  550 bits (1418), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 271/271 (100%), Positives = 271/271 (100%)

Query: 1   MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
           MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV
Sbjct: 1   MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY
Sbjct: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF
Sbjct: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
           YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL
Sbjct: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240

Query: 241 ALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           ALMDEAREVVSLIQERYPQGYWARYVETLVK
Sbjct: 241 ALMDEAREVVSLIQERYPQGYWARYVETLVK 271


>gi|315122569|ref|YP_004063058.1| outer membrane assembly lipoprotein YfiO [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495971|gb|ADR52570.1| outer membrane assembly lipoprotein YfiO [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 258

 Score =  300 bits (767), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 146/255 (57%), Positives = 190/255 (74%), Gaps = 2/255 (0%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQS--SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
           +Y+F LTIFF   + FL   + Q+  S++    S++D +YQR +YEKAV  L+ +NF KA
Sbjct: 1   MYRFVLTIFFISTLSFLASCKHQNQPSQNFIFPSISDKKYQRNLYEKAVELLENKNFEKA 60

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            + F   S++ PF  VARK+LLMSAF +Y   KY  +ASLGEEYI QYP S+++DYVYYL
Sbjct: 61  SKEFYSFSKELPFNDVARKALLMSAFAKYKTKKYLSSASLGEEYIAQYPNSEDIDYVYYL 120

Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
           VGMSYAQ IR+V YDQ  T+ M+QYMS I+E+Y  SPY KGA+FY+++GRNQLA +E+ +
Sbjct: 121 VGMSYAQKIRNVSYDQHPTQSMVQYMSEILEKYPKSPYSKGAQFYLSIGRNQLAGQEMYV 180

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           GRYYLK  EYV+AI RFQLV+ANY D E  EEAMARLVEAY  L L+DEA  + S+IQ++
Sbjct: 181 GRYYLKNKEYVSAILRFQLVIANYFDTEQVEEAMARLVEAYFMLGLVDEATSMASVIQQK 240

Query: 257 YPQGYWARYVETLVK 271
           YP+G W+ YV  LV+
Sbjct: 241 YPKGLWSDYVSDLVQ 255


>gi|218659461|ref|ZP_03515391.1| hypothetical protein RetlI_07243 [Rhizobium etli IE4771]
          Length = 294

 Score =  178 bits (451), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 86/203 (42%), Positives = 133/203 (65%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y + +  +K  N ++A   F+   R+ PF+  ARK+L+MS FV+Y  GK+  A + G  
Sbjct: 58  LYTQGLANMKAGNMAEAARKFDAIDRENPFSEWARKALVMSTFVKYRQGKFDDALASGNR 117

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           Y+ QYP+S++  YV YLVG++Y++ I DV  DQRA+   ++ M  +V+ Y NS YV  A+
Sbjct: 118 YMAQYPKSQDAAYVQYLVGLTYSKQIVDVTQDQRASAKTIEAMQAVVDNYPNSEYVDDAQ 177

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             +   R+QLA KE++IGRYY++R EY+AAI RF++V+  Y +    EEA+ARLVEAY A
Sbjct: 178 AKIRYARDQLAGKEMQIGRYYMERKEYLAAISRFRIVVEKYPNTNQIEEALARLVEAYYA 237

Query: 240 LALMDEAREVVSLIQERYPQGYW 262
           + ++DEA+   +++   YP   W
Sbjct: 238 MGIVDEAQTAAAVLGHNYPDSQW 260


>gi|241205546|ref|YP_002976642.1| outer membrane assembly lipoprotein YfiO [Rhizobium leguminosarum
           bv. trifolii WSM1325]
 gi|240859436|gb|ACS57103.1| outer membrane assembly lipoprotein YfiO [Rhizobium leguminosarum
           bv. trifolii WSM1325]
          Length = 281

 Score =  177 bits (448), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 84/203 (41%), Positives = 133/203 (65%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y + +  +K  N ++A   F+   R+ PF+  ARK+L+MS FV+Y  G+   A + G  
Sbjct: 45  LYTQGLANMKAGNMAEAARKFDAIDRENPFSEWARKALVMSTFVKYRQGRLDDALASGNR 104

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           Y++QYP+S++  YV YL+G++Y++ I DV  DQRA+   ++ M  +++ Y NS YV  A+
Sbjct: 105 YMSQYPKSQDAAYVQYLIGLTYSKQIVDVTQDQRASAKTIEAMQAVIDNYPNSEYVDDAQ 164

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             +   R+QLA KE++IGRYYL+R EY+AAI RF++V+  Y +    EEA+ARLVEAY A
Sbjct: 165 AKIRFSRDQLAGKEMQIGRYYLERKEYLAAISRFRIVVEKYPNTNQIEEALARLVEAYYA 224

Query: 240 LALMDEAREVVSLIQERYPQGYW 262
           + ++DEA+   +++   YP   W
Sbjct: 225 MGIVDEAQTAAAVLGHNYPDSQW 247


>gi|209550164|ref|YP_002282081.1| outer membrane assembly lipoprotein YfiO [Rhizobium leguminosarum
           bv. trifolii WSM2304]
 gi|209535920|gb|ACI55855.1| outer membrane assembly lipoprotein YfiO [Rhizobium leguminosarum
           bv. trifolii WSM2304]
          Length = 281

 Score =  176 bits (447), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 83/203 (40%), Positives = 133/203 (65%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y + +  +K  N ++A   F+   R+ PF+  ARK+L+MS FV+Y  G+   A + G  
Sbjct: 45  LYTQGLANMKAGNMAEAARKFDAIDRENPFSEWARKALVMSTFVKYRQGRLDDALTSGNR 104

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           Y++QYP+S++  YV YL+G++Y++ I DV  DQRA+   ++ M  +++ Y NS YV  A+
Sbjct: 105 YMSQYPKSQDAAYVQYLIGLTYSKQIVDVTQDQRASAKTIEAMQAVIDNYPNSEYVDDAQ 164

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             +   R+QLA KE++IGRYY++R EY+AAI RF++V+  Y +    EEA+ARLVEAY A
Sbjct: 165 AKIRFARDQLAGKEMQIGRYYMERKEYLAAISRFRIVVEKYPNTNQIEEALARLVEAYYA 224

Query: 240 LALMDEAREVVSLIQERYPQGYW 262
           + ++DEA+   +++   YP   W
Sbjct: 225 MGIVDEAQTAAAVLGHNYPDSQW 247


>gi|190892573|ref|YP_001979115.1| competence lipoprotein protein [Rhizobium etli CIAT 652]
 gi|190697852|gb|ACE91937.1| competence lipoprotein protein [Rhizobium etli CIAT 652]
 gi|327194613|gb|EGE61463.1| competence lipoprotein protein [Rhizobium etli CNPAF512]
          Length = 289

 Score =  176 bits (447), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 86/203 (42%), Positives = 131/203 (64%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y + +  +K  N ++A   F+   R+ PF+  ARK+L+MS FV+Y  GK   A + G  
Sbjct: 53  LYTQGLANMKAGNMAEAARKFDAIDRENPFSEWARKALVMSTFVKYRQGKLDDALASGNR 112

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           Y+ QYP+S++  YV YLVG++Y++ I DV  DQRA    ++ M  +V+ Y NS YV  A+
Sbjct: 113 YMAQYPKSQDAAYVQYLVGLTYSKQIVDVTQDQRAAAKTIEAMQAVVDNYPNSEYVDDAQ 172

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             +   R+QLA KE++IGRYY++R EY+AAI RF++V+  Y +    EEA+ARLVEAY A
Sbjct: 173 AKIRFARDQLAGKEMQIGRYYMERKEYLAAISRFRIVVEKYPNTNQIEEALARLVEAYYA 232

Query: 240 LALMDEAREVVSLIQERYPQGYW 262
           + ++DEA+   +++   YP   W
Sbjct: 233 MGIVDEAQTAAAVLGHNYPDSQW 255


>gi|86358441|ref|YP_470333.1| hypothetical protein RHE_CH02838 [Rhizobium etli CFN 42]
 gi|86282543|gb|ABC91606.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 289

 Score =  176 bits (447), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 83/203 (40%), Positives = 133/203 (65%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y + +  +K  N ++A   F+   R+ PF+  ARK+L+MS FV+Y  GK   A + G  
Sbjct: 53  LYTQGLANMKAGNMAEAARKFDAIDRENPFSEWARKALVMSTFVKYRQGKLDDALASGNR 112

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           Y++QYP+S++  YV YL+G++Y++ I DV  DQRA+   ++ M  +++ Y NS YV  A+
Sbjct: 113 YMSQYPKSQDAAYVQYLIGLTYSKQIVDVTQDQRASAKTIEAMQAVIDNYPNSEYVDDAQ 172

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             +   R+QLA KE+++GRYY++R EY+AAI RF++V+  Y +    EEA+ARLVEAY A
Sbjct: 173 AKIRFARDQLAGKEMQVGRYYMERKEYLAAISRFRIVVEKYPNTNQIEEALARLVEAYYA 232

Query: 240 LALMDEAREVVSLIQERYPQGYW 262
           + ++DEA+   +++   YP   W
Sbjct: 233 MGIVDEAQTAAAVLGHNYPDSQW 255


>gi|116253037|ref|YP_768875.1| competence lipoprotein ComL protein [Rhizobium leguminosarum bv.
           viciae 3841]
 gi|115257685|emb|CAK08783.1| putative competence lipoprotein ComL protein [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 289

 Score =  176 bits (446), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 83/203 (40%), Positives = 133/203 (65%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y + +  +K  N ++A   F+   R+ PF+  ARK+L+MS FV+Y  G+   A + G  
Sbjct: 53  LYTQGLANMKAGNMAEAARKFDAIDRENPFSEWARKALVMSTFVKYRQGRLDDALASGNR 112

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           Y++QYP+S++  YV YL+G++Y++ I DV  DQRA+   ++ M  +++ Y NS YV  A+
Sbjct: 113 YMSQYPKSQDAAYVQYLIGLTYSKQIVDVTQDQRASAKTIEAMQAVIDNYPNSEYVDDAQ 172

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             +   R+QLA KE++IGRYY++R EY+AAI RF++V+  Y +    EEA+ARLVEAY A
Sbjct: 173 AKIRFSRDQLAGKEMQIGRYYMERKEYLAAISRFRIVVEKYPNTNQIEEALARLVEAYYA 232

Query: 240 LALMDEAREVVSLIQERYPQGYW 262
           + ++DEA+   +++   YP   W
Sbjct: 233 MGIVDEAQTAAAVLGHNYPDSQW 255


>gi|218673357|ref|ZP_03523026.1| competence lipoprotein protein [Rhizobium etli GR56]
          Length = 248

 Score =  176 bits (445), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 85/203 (41%), Positives = 132/203 (65%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y + +  +K  N ++A   F+   R+ PF+  ARK+L+MS FV+Y  G+   A + G  
Sbjct: 45  LYTQGLANMKAGNMAEAARKFDAIDRENPFSEWARKALVMSTFVKYRQGRLDDALASGNR 104

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           Y+ QYP+S++  YV YLVG++Y++ I DV  DQRA+   ++ M  +V+ Y NS YV  A+
Sbjct: 105 YMAQYPKSQDAAYVQYLVGLTYSKQIVDVTQDQRASAKTIEAMQAVVDNYPNSEYVDDAQ 164

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             +   R+QLA KE++IGRYY++R EY+AAI RF++V+  Y +    EEA+ARLVEAY A
Sbjct: 165 AKIRYARDQLAGKEMQIGRYYMERKEYLAAISRFRIVVEKYPNTNQIEEALARLVEAYYA 224

Query: 240 LALMDEAREVVSLIQERYPQGYW 262
           + ++DEA+   +++   YP   W
Sbjct: 225 MGIVDEAQTAAAVLGHNYPDSQW 247


>gi|222086434|ref|YP_002544968.1| hypothetical protein Arad_2982 [Agrobacterium radiobacter K84]
 gi|221723882|gb|ACM27038.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 289

 Score =  173 bits (439), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 86/203 (42%), Positives = 129/203 (63%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y + +  +K  N ++A   F+  ++  PF+  ARK+L+MS FV+Y  G+Y  A   G  
Sbjct: 53  LYNQGLANIKAGNMAEAGRKFDAINQQQPFSEWARKALVMSTFVKYRTGRYDDAVQSGNS 112

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           Y+ QYP S++ DYV YLVG SYA+ I  V  DQRA +  ++ MS++V  Y +S YV  A+
Sbjct: 113 YLKQYPGSEDADYVQYLVGSSYAKQIVSVTQDQRAAQQTIEAMSKVVTNYPSSQYVSDAQ 172

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             +   R+QLA KE++IGRYYL+R +Y+AAI RF++V+  Y      EEA+ARLVEAY A
Sbjct: 173 AKIRFARDQLAGKEMQIGRYYLERKDYLAAISRFRIVIEQYPTTNQIEEALARLVEAYYA 232

Query: 240 LALMDEAREVVSLIQERYPQGYW 262
           + ++ EA+   +++   YP   W
Sbjct: 233 MGIVQEAQTAAAVLGHNYPDSRW 255


>gi|110634349|ref|YP_674557.1| putative lipoprotein [Mesorhizobium sp. BNC1]
 gi|110285333|gb|ABG63392.1| putative lipoprotein [Chelativorans sp. BNC1]
          Length = 288

 Score =  169 bits (428), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 83/212 (39%), Positives = 132/212 (62%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y + +  L      +A   F    R  P++  ARK+L+M+AF  Y  GKY +A + G+ 
Sbjct: 53  LYNQGLANLNAGRMREAIAKFEAVDRQHPYSEFARKALIMNAFANYRQGKYTEAINAGKR 112

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           Y+T YP S++  Y  YLVG+SY + I+DV  DQR  +L ++ M ++V+ +  S YV  A+
Sbjct: 113 YVTLYPTSEDAAYAQYLVGLSYFRQIKDVTQDQREARLTIEAMQQVVDVWPESEYVTDAQ 172

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             +   R+QLA KE+++GRYYL+R EY+AA+ RF+ V+ NY +  H EEA+ARLVEAY+A
Sbjct: 173 AKIRFARDQLAGKEMQVGRYYLERREYIAAVRRFRGVVENYGNTRHVEEALARLVEAYLA 232

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           + +  EA+   +++   +P   W +   TL++
Sbjct: 233 MGIASEAQTAAAVLGHNFPDSQWYKDSYTLLQ 264


>gi|254719454|ref|ZP_05181265.1| COML, competence lipoprotein [Brucella sp. 83/13]
 gi|265984459|ref|ZP_06097194.1| competence protein ComL [Brucella sp. 83/13]
 gi|306839231|ref|ZP_07472048.1| outer membrane assembly lipoprotein YfiO [Brucella sp. NF 2653]
 gi|306843231|ref|ZP_07475841.1| outer membrane assembly lipoprotein YfiO [Brucella sp. BO2]
 gi|306844321|ref|ZP_07476913.1| outer membrane assembly lipoprotein YfiO [Brucella sp. BO1]
 gi|264663051|gb|EEZ33312.1| competence protein ComL [Brucella sp. 83/13]
 gi|306275393|gb|EFM57134.1| outer membrane assembly lipoprotein YfiO [Brucella sp. BO1]
 gi|306286554|gb|EFM58133.1| outer membrane assembly lipoprotein YfiO [Brucella sp. BO2]
 gi|306405778|gb|EFM62040.1| outer membrane assembly lipoprotein YfiO [Brucella sp. NF 2653]
          Length = 287

 Score =  167 bits (422), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 90/241 (37%), Positives = 138/241 (57%), Gaps = 3/241 (1%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDS---VTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
           T   S A+  L+     +S++  +D    V  +    ++Y + +  L      +A + F 
Sbjct: 12  TALLSGAIAVLIPLAGCASKNDDIDLTKYVETIDPADKLYNEGLANLDAGRLDEAAKKFA 71

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
              R  P+   ARK+L+M+AF  Y  G Y++A S+ + Y T YP S    Y YY++G+SY
Sbjct: 72  AIDRQHPYTEWARKALVMAAFTNYRKGNYEEAISMAKRYNTLYPTSPESAYAYYIIGLSY 131

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            + I DV  DQ A++  +  M  +++R+ NS Y   A+  + V R+QLA KE++IGRYYL
Sbjct: 132 FRQIPDVTRDQAASRRAIAAMQEVIDRFPNSEYTDDAKTKIRVARDQLAGKEMQIGRYYL 191

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +R EY+AAI RF+ V+  YS+    EEA+ARLVEAY AL L  EA+   S++ + +P   
Sbjct: 192 ERKEYLAAIKRFRGVVEEYSNTRQVEEALARLVEAYYALGLTSEAQMAASVLGKNFPDSQ 251

Query: 262 W 262
           W
Sbjct: 252 W 252


>gi|148558858|ref|YP_001259314.1| putative competence protein ComL [Brucella ovis ATCC 25840]
 gi|148370115|gb|ABQ60094.1| putative competence protein ComL [Brucella ovis ATCC 25840]
          Length = 287

 Score =  166 bits (420), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 89/241 (36%), Positives = 136/241 (56%), Gaps = 3/241 (1%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDS---VTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
           T   S  +  L+     +S++  +D    V  +    ++Y + +  L      +A + F 
Sbjct: 12  TALLSGTIAVLIPLAGCASKNDDIDLTKYVETINPADKLYNEGLANLDAGRLDEAAKKFA 71

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
              R  P+   ARK+L+M+AF  Y  G Y++A S+ + Y T YP S    Y YY++G+SY
Sbjct: 72  AIDRQHPYTEWARKALVMAAFTNYRKGNYEEAISMAKRYNTLYPTSPESAYAYYIIGLSY 131

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
              I DV  DQ A++  +  M  +++R+ NS Y   A+  + V R+QLA KE++IGRYYL
Sbjct: 132 FHQIPDVTRDQAASRRAIAAMQEVIDRFPNSEYTDDAKTKIRVARDQLAGKEMQIGRYYL 191

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +R EY+AAI RF+ V+  YS+    EEA+ARLVEAY AL L  EA+   S++ + +P   
Sbjct: 192 ERKEYLAAIKRFRGVVEEYSNTRQVEEALARLVEAYYALGLTSEAQMAASVLGKNFPDSQ 251

Query: 262 W 262
           W
Sbjct: 252 W 252


>gi|239832301|ref|ZP_04680630.1| outer membrane assembly lipoprotein YfiO [Ochrobactrum intermedium
           LMG 3301]
 gi|239824568|gb|EEQ96136.1| outer membrane assembly lipoprotein YfiO [Ochrobactrum intermedium
           LMG 3301]
          Length = 287

 Score =  166 bits (419), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 90/241 (37%), Positives = 137/241 (56%), Gaps = 3/241 (1%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDS---VTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
           T   + A+  L+     +S+D  +D    V  +    ++Y + +  L      +A + F 
Sbjct: 12  TALLTGAIAVLIPLAGCASKDDDIDLTKYVETIDPADKLYNEGLANLDAGRLDEAAKKFA 71

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
              R  P+   ARKSL+M+AF  Y  G Y++A S+ + Y T YP S    Y YY++G+SY
Sbjct: 72  AVDRQHPYTEWARKSLVMAAFTNYRKGNYEEAISMAKRYNTLYPTSPESAYAYYIIGLSY 131

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            + I DV  DQ A++  +  M  +V+R+ +S Y   A+  +   R+QLA KE+++GRYYL
Sbjct: 132 FRQIPDVTRDQAASRRAIAAMQEVVDRFPDSEYTDDAKAKIRFARDQLAGKEMQVGRYYL 191

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +R EY+AAI RF+ V+  YS+    EEA+ARLVEAY AL L  EA+   S++ + YP   
Sbjct: 192 ERKEYLAAIKRFRGVVEEYSNTRQVEEALARLVEAYYALGLTSEAQMAASVLGKNYPDSQ 251

Query: 262 W 262
           W
Sbjct: 252 W 252


>gi|153009082|ref|YP_001370297.1| competence protein ComL [Ochrobactrum anthropi ATCC 49188]
 gi|151560970|gb|ABS14468.1| ComL, hypothetical competence protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 287

 Score =  166 bits (419), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 90/241 (37%), Positives = 136/241 (56%), Gaps = 3/241 (1%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDS---VTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
           T   + A+  L+     +S+D  +D    V  +    + Y + +  L      +A + F 
Sbjct: 12  TALLTGAIAVLIPLAGCASKDDDIDLTKYVETIDPADKTYNEGLANLDAGRLDEAAKKFA 71

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
              R  P+   ARKSL+M+AF  Y  G Y++A S+ + Y T YP S    Y YY++G+SY
Sbjct: 72  AVDRQHPYTEWARKSLVMAAFTNYRKGNYEEAISMAKRYNTLYPTSPESAYAYYIIGLSY 131

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            + I DV  DQ A++  +  M  +V+R+ +S Y   AR  +   R+QLA KE+++GRYYL
Sbjct: 132 FRQIPDVTRDQAASRRAIAAMQEVVDRFPDSEYTDDARAKIRFARDQLAGKEMQVGRYYL 191

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +R EY+A+I RF+ V+  YS+    EEA+ARLVEAY AL L  EA+   S++ + YP   
Sbjct: 192 ERKEYLASIKRFRGVVEEYSNTRQVEEALARLVEAYYALGLTSEAQMAASVLGKNYPDSQ 251

Query: 262 W 262
           W
Sbjct: 252 W 252


>gi|23502293|ref|NP_698420.1| competence protein ComL [Brucella suis 1330]
 gi|62290315|ref|YP_222108.1| competence protein ComL [Brucella abortus bv. 1 str. 9-941]
 gi|82700239|ref|YP_414813.1| TPR repeat-containing protein [Brucella melitensis biovar Abortus
           2308]
 gi|161619370|ref|YP_001593257.1| hypothetical protein BCAN_A1455 [Brucella canis ATCC 23365]
 gi|163843677|ref|YP_001628081.1| hypothetical protein BSUIS_A1473 [Brucella suis ATCC 23445]
 gi|189024549|ref|YP_001935317.1| TPR repeat-containing protein [Brucella abortus S19]
 gi|225852904|ref|YP_002733137.1| outer membrane assembly lipoprotein YfiO [Brucella melitensis ATCC
           23457]
 gi|254689617|ref|ZP_05152871.1| COML, competence lipoprotein [Brucella abortus bv. 6 str. 870]
 gi|254694107|ref|ZP_05155935.1| COML, competence lipoprotein [Brucella abortus bv. 3 str. Tulya]
 gi|254697759|ref|ZP_05159587.1| COML, competence lipoprotein [Brucella abortus bv. 2 str. 86/8/59]
 gi|254702144|ref|ZP_05163972.1| COML, competence lipoprotein [Brucella suis bv. 5 str. 513]
 gi|254704680|ref|ZP_05166508.1| COML, competence lipoprotein [Brucella suis bv. 3 str. 686]
 gi|254708095|ref|ZP_05169923.1| COML, competence lipoprotein [Brucella pinnipedialis M163/99/10]
 gi|254710464|ref|ZP_05172275.1| COML, competence lipoprotein [Brucella pinnipedialis B2/94]
 gi|254714457|ref|ZP_05176268.1| COML, competence lipoprotein [Brucella ceti M644/93/1]
 gi|254717355|ref|ZP_05179166.1| COML, competence lipoprotein [Brucella ceti M13/05/1]
 gi|254730648|ref|ZP_05189226.1| COML, competence lipoprotein [Brucella abortus bv. 4 str. 292]
 gi|256031958|ref|ZP_05445572.1| COML, competence lipoprotein [Brucella pinnipedialis M292/94/1]
 gi|256045053|ref|ZP_05447954.1| COML, competence lipoprotein [Brucella melitensis bv. 1 str. Rev.1]
 gi|256061480|ref|ZP_05451624.1| COML, competence lipoprotein [Brucella neotomae 5K33]
 gi|256113976|ref|ZP_05454759.1| COML, competence lipoprotein [Brucella melitensis bv. 3 str. Ether]
 gi|256160157|ref|ZP_05457851.1| COML, competence lipoprotein [Brucella ceti M490/95/1]
 gi|256255363|ref|ZP_05460899.1| COML, competence lipoprotein [Brucella ceti B1/94]
 gi|256263614|ref|ZP_05466146.1| TPR repeat-containing protein [Brucella melitensis bv. 2 str. 63/9]
 gi|256369838|ref|YP_003107349.1| competence protein ComL [Brucella microti CCM 4915]
 gi|260169095|ref|ZP_05755906.1| COML, competence lipoprotein [Brucella sp. F5/99]
 gi|260546858|ref|ZP_05822597.1| TPR repeat-containing protein [Brucella abortus NCTC 8038]
 gi|260565348|ref|ZP_05835832.1| TPR repeat-containing protein [Brucella melitensis bv. 1 str. 16M]
 gi|260566072|ref|ZP_05836542.1| TPR repeat-containing protein [Brucella suis bv. 4 str. 40]
 gi|260755144|ref|ZP_05867492.1| competence protein ComL [Brucella abortus bv. 6 str. 870]
 gi|260758363|ref|ZP_05870711.1| competence protein ComL [Brucella abortus bv. 4 str. 292]
 gi|260762189|ref|ZP_05874532.1| competence protein ComL [Brucella abortus bv. 2 str. 86/8/59]
 gi|261214405|ref|ZP_05928686.1| competence protein ComL [Brucella abortus bv. 3 str. Tulya]
 gi|261219185|ref|ZP_05933466.1| competence protein ComL [Brucella ceti M13/05/1]
 gi|261222564|ref|ZP_05936845.1| competence protein ComL [Brucella ceti B1/94]
 gi|261315597|ref|ZP_05954794.1| competence protein ComL [Brucella pinnipedialis M163/99/10]
 gi|261318035|ref|ZP_05957232.1| competence protein ComL [Brucella pinnipedialis B2/94]
 gi|261322246|ref|ZP_05961443.1| competence protein ComL [Brucella ceti M644/93/1]
 gi|261325486|ref|ZP_05964683.1| competence protein ComL [Brucella neotomae 5K33]
 gi|261752713|ref|ZP_05996422.1| competence protein ComL [Brucella suis bv. 5 str. 513]
 gi|261755373|ref|ZP_05999082.1| competence protein ComL [Brucella suis bv. 3 str. 686]
 gi|261758600|ref|ZP_06002309.1| TPR repeat-containing protein [Brucella sp. F5/99]
 gi|265989066|ref|ZP_06101623.1| competence protein ComL [Brucella pinnipedialis M292/94/1]
 gi|265991479|ref|ZP_06104036.1| competence protein ComL [Brucella melitensis bv. 1 str. Rev.1]
 gi|265995317|ref|ZP_06107874.1| competence protein ComL [Brucella melitensis bv. 3 str. Ether]
 gi|265998529|ref|ZP_06111086.1| competence protein ComL [Brucella ceti M490/95/1]
 gi|294852749|ref|ZP_06793422.1| UPF0169 lipoprotein [Brucella sp. NVSL 07-0026]
 gi|297248702|ref|ZP_06932420.1| lipoprotein [Brucella abortus bv. 5 str. B3196]
 gi|23348269|gb|AAN30335.1| competence protein ComL, putative [Brucella suis 1330]
 gi|62196447|gb|AAX74747.1| ComL, hypothetical competence protein [Brucella abortus bv. 1 str.
           9-941]
 gi|82616340|emb|CAJ11397.1| TPR repeat:Protein of unknown function UPF0169 [Brucella melitensis
           biovar Abortus 2308]
 gi|161336181|gb|ABX62486.1| Hypothetical protein BCAN_A1455 [Brucella canis ATCC 23365]
 gi|163674400|gb|ABY38511.1| Hypothetical protein BSUIS_A1473 [Brucella suis ATCC 23445]
 gi|189020121|gb|ACD72843.1| TPR repeat-containing protein [Brucella abortus S19]
 gi|225641269|gb|ACO01183.1| outer membrane assembly lipoprotein YfiO [Brucella melitensis ATCC
           23457]
 gi|256000001|gb|ACU48400.1| competence protein ComL [Brucella microti CCM 4915]
 gi|260095908|gb|EEW79785.1| TPR repeat-containing protein [Brucella abortus NCTC 8038]
 gi|260151416|gb|EEW86510.1| TPR repeat-containing protein [Brucella melitensis bv. 1 str. 16M]
 gi|260155590|gb|EEW90670.1| TPR repeat-containing protein [Brucella suis bv. 4 str. 40]
 gi|260668681|gb|EEX55621.1| competence protein ComL [Brucella abortus bv. 4 str. 292]
 gi|260672621|gb|EEX59442.1| competence protein ComL [Brucella abortus bv. 2 str. 86/8/59]
 gi|260675252|gb|EEX62073.1| competence protein ComL [Brucella abortus bv. 6 str. 870]
 gi|260916012|gb|EEX82873.1| competence protein ComL [Brucella abortus bv. 3 str. Tulya]
 gi|260921148|gb|EEX87801.1| competence protein ComL [Brucella ceti B1/94]
 gi|260924274|gb|EEX90842.1| competence protein ComL [Brucella ceti M13/05/1]
 gi|261294936|gb|EEX98432.1| competence protein ComL [Brucella ceti M644/93/1]
 gi|261297258|gb|EEY00755.1| competence protein ComL [Brucella pinnipedialis B2/94]
 gi|261301466|gb|EEY04963.1| competence protein ComL [Brucella neotomae 5K33]
 gi|261304623|gb|EEY08120.1| competence protein ComL [Brucella pinnipedialis M163/99/10]
 gi|261738584|gb|EEY26580.1| TPR repeat-containing protein [Brucella sp. F5/99]
 gi|261742466|gb|EEY30392.1| competence protein ComL [Brucella suis bv. 5 str. 513]
 gi|261745126|gb|EEY33052.1| competence protein ComL [Brucella suis bv. 3 str. 686]
 gi|262553153|gb|EEZ08987.1| competence protein ComL [Brucella ceti M490/95/1]
 gi|262766430|gb|EEZ12219.1| competence protein ComL [Brucella melitensis bv. 3 str. Ether]
 gi|263002263|gb|EEZ14838.1| competence protein ComL [Brucella melitensis bv. 1 str. Rev.1]
 gi|263093666|gb|EEZ17671.1| TPR repeat-containing protein [Brucella melitensis bv. 2 str. 63/9]
 gi|264661263|gb|EEZ31524.1| competence protein ComL [Brucella pinnipedialis M292/94/1]
 gi|294821338|gb|EFG38337.1| UPF0169 lipoprotein [Brucella sp. NVSL 07-0026]
 gi|297175871|gb|EFH35218.1| lipoprotein [Brucella abortus bv. 5 str. B3196]
 gi|326409446|gb|ADZ66511.1| TPR repeat-containing protein [Brucella melitensis M28]
 gi|326539152|gb|ADZ87367.1| outer membrane assembly lipoprotein YfiO [Brucella melitensis
           M5-90]
          Length = 287

 Score =  165 bits (418), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 89/241 (36%), Positives = 137/241 (56%), Gaps = 3/241 (1%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDS---VTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
           T   S  +  L+     +S++  +D    V  +    ++Y + +  L      +A + F 
Sbjct: 12  TALLSGTIAVLIPLAGCASKNDDIDLTKYVETIDPADKLYNEGLANLDAGRLDEAAKKFA 71

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
              R  P+   ARK+L+M+AF  Y  G Y++A S+ + Y T YP S    Y YY++G+SY
Sbjct: 72  AIDRQHPYTEWARKALVMAAFTNYRKGNYEEAISMAKRYNTLYPTSPESAYAYYIIGLSY 131

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            + I DV  DQ A++  +  M  +++R+ NS Y   A+  + V R+QLA KE++IGRYYL
Sbjct: 132 FRQIPDVTRDQAASRRAIAAMQEVIDRFPNSEYTDDAKTKIRVARDQLAGKEMQIGRYYL 191

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +R EY+AAI RF+ V+  YS+    EEA+ARLVEAY AL L  EA+   S++ + +P   
Sbjct: 192 ERKEYLAAIKRFRGVVEEYSNTRQVEEALARLVEAYYALGLTSEAQMAASVLGKNFPDSQ 251

Query: 262 W 262
           W
Sbjct: 252 W 252


>gi|17986870|ref|NP_539504.1| COML, competence lipoprotein [Brucella melitensis bv. 1 str. 16M]
 gi|17982509|gb|AAL51768.1| coml, competence lipoprotein [Brucella melitensis bv. 1 str. 16M]
          Length = 309

 Score =  165 bits (418), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 89/241 (36%), Positives = 137/241 (56%), Gaps = 3/241 (1%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDS---VTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
           T   S  +  L+     +S++  +D    V  +    ++Y + +  L      +A + F 
Sbjct: 34  TALLSGTIAVLIPLAGCASKNDDIDLTKYVETIDPADKLYNEGLANLDAGRLDEAAKKFA 93

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
              R  P+   ARK+L+M+AF  Y  G Y++A S+ + Y T YP S    Y YY++G+SY
Sbjct: 94  AIDRQHPYTEWARKALVMAAFTNYRKGNYEEAISMAKRYNTLYPTSPESAYAYYIIGLSY 153

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            + I DV  DQ A++  +  M  +++R+ NS Y   A+  + V R+QLA KE++IGRYYL
Sbjct: 154 FRQIPDVTRDQAASRRAIAAMQEVIDRFPNSEYTDDAKTKIRVARDQLAGKEMQIGRYYL 213

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +R EY+AAI RF+ V+  YS+    EEA+ARLVEAY AL L  EA+   S++ + +P   
Sbjct: 214 ERKEYLAAIKRFRGVVEEYSNTRQVEEALARLVEAYYALGLTSEAQMAASVLGKNFPDSQ 273

Query: 262 W 262
           W
Sbjct: 274 W 274


>gi|225627872|ref|ZP_03785909.1| outer membrane assembly lipoprotein YfiO [Brucella ceti str. Cudo]
 gi|237815822|ref|ZP_04594819.1| outer membrane assembly lipoprotein YfiO [Brucella abortus str.
           2308 A]
 gi|225617877|gb|EEH14922.1| outer membrane assembly lipoprotein YfiO [Brucella ceti str. Cudo]
 gi|237789120|gb|EEP63331.1| outer membrane assembly lipoprotein YfiO [Brucella abortus str.
           2308 A]
          Length = 323

 Score =  165 bits (417), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 89/241 (36%), Positives = 137/241 (56%), Gaps = 3/241 (1%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDS---VTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
           T   S  +  L+     +S++  +D    V  +    ++Y + +  L      +A + F 
Sbjct: 48  TALLSGTIAVLIPLAGCASKNDDIDLTKYVETIDPADKLYNEGLANLDAGRLDEAAKKFA 107

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
              R  P+   ARK+L+M+AF  Y  G Y++A S+ + Y T YP S    Y YY++G+SY
Sbjct: 108 AIDRQHPYTEWARKALVMAAFTNYRKGNYEEAISMAKRYNTLYPTSPESAYAYYIIGLSY 167

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            + I DV  DQ A++  +  M  +++R+ NS Y   A+  + V R+QLA KE++IGRYYL
Sbjct: 168 FRQIPDVTRDQAASRRAIAAMQEVIDRFPNSEYTDDAKTKIRVARDQLAGKEMQIGRYYL 227

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +R EY+AAI RF+ V+  YS+    EEA+ARLVEAY AL L  EA+   S++ + +P   
Sbjct: 228 ERKEYLAAIKRFRGVVEEYSNTRQVEEALARLVEAYYALGLTSEAQMAASVLGKNFPDSQ 287

Query: 262 W 262
           W
Sbjct: 288 W 288


>gi|260462098|ref|ZP_05810342.1| outer membrane assembly lipoprotein YfiO [Mesorhizobium
           opportunistum WSM2075]
 gi|259031958|gb|EEW33225.1| outer membrane assembly lipoprotein YfiO [Mesorhizobium
           opportunistum WSM2075]
          Length = 362

 Score =  164 bits (414), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 83/222 (37%), Positives = 128/222 (57%), Gaps = 1/222 (0%)

Query: 42  SSRDVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
           S +D+ L +  D     +V Y + +  L      +A + F+   R  P++  ARKS++M 
Sbjct: 108 SEKDIDLSTYVDQTEPADVLYNQGLANLNAGRLDEASKKFDAVDRQHPYSEWARKSMVMG 167

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           AF  Y  G Y +A S  + Y+  YP + +  Y  Y++G+SY + I+DV  DQ+  +  LQ
Sbjct: 168 AFADYRKGSYDEAISSAKRYLALYPSTDDAPYAQYIIGLSYYRQIKDVTQDQKEARQTLQ 227

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
            M  +V R+  S YV  A+  +    +QLA KE++IGRYYL+R EY+AA+ RF+ V+ NY
Sbjct: 228 TMQDLVTRWPTSEYVDDAKEKIRFANDQLAGKEMQIGRYYLERREYIAAVKRFRTVVENY 287

Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           S+  H EEA+ARL E+Y A+ L  EA+   +++   YP   W
Sbjct: 288 SNTRHVEEALARLTESYYAMGLTSEAQTAAAVLGTNYPDSPW 329


>gi|13471541|ref|NP_103107.1| hypothetical protein mll1543 [Mesorhizobium loti MAFF303099]
 gi|18202649|sp|Q98KC1|Y1543_RHILO RecName: Full=UPF0169 lipoprotein Mll1543; Flags: Precursor
 gi|14022283|dbj|BAB48893.1| mll1543 [Mesorhizobium loti MAFF303099]
          Length = 289

 Score =  163 bits (413), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 83/222 (37%), Positives = 127/222 (57%), Gaps = 1/222 (0%)

Query: 42  SSRDVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
           S +D+ L    D     +V Y + +  L      +A + F+   R  P++  ARKS++M 
Sbjct: 35  SEKDIDLSKYVDQTEPADVLYNQGLANLNAGRLDEASKKFDAVDRQHPYSEWARKSMVMG 94

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           AF  Y  G Y +A S  + Y+  YP + +  Y  Y++G+SY + I+DV  DQ+  +  LQ
Sbjct: 95  AFADYRKGSYDEAISSAKRYLALYPSTDDAPYAQYIIGLSYYRQIKDVTQDQKEARQTLQ 154

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
            M  +V R+  S YV  A+  +    +QLA KE++IGRYYL+R EY+AA+ RF+ V+ NY
Sbjct: 155 TMQDLVTRWPTSEYVDDAKEKIRFANDQLAGKEMQIGRYYLERREYIAAVKRFRTVVENY 214

Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           S+  H EEA+ARL E+Y A+ L  EA+   +++   YP   W
Sbjct: 215 SNTRHVEEALARLTESYYAMGLTSEAQTAAAVLGTNYPDSPW 256


>gi|319782856|ref|YP_004142332.1| outer membrane assembly lipoprotein YfiO [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317168744|gb|ADV12282.1| outer membrane assembly lipoprotein YfiO [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 289

 Score =  162 bits (411), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 82/222 (36%), Positives = 127/222 (57%), Gaps = 1/222 (0%)

Query: 42  SSRDVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
           S +D+ L +  D     +V Y + +  L      +A   F+   R  P++  ARKS++M 
Sbjct: 35  SEKDIDLSTYVDQTEPADVLYNQGLANLNAGRLQEASRKFDAVDRQHPYSEWARKSMVMG 94

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           AF  Y  G Y +A    + Y+T YP + +  Y  Y++G+SY + I+DV  DQ+  +  +Q
Sbjct: 95  AFADYRQGNYDEAIGSAKRYLTLYPSTDDAAYAQYIIGLSYYRQIKDVTQDQKEARQTVQ 154

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
            M  +V R+  S YV  A+  +    +QLA KE++IGRYYL+R EY+AA+ RF+ V+ NY
Sbjct: 155 TMQDLVTRWPTSEYVDDAKEKIRFANDQLAGKEMQIGRYYLERREYIAAVKRFRTVVENY 214

Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           S+  H EEA+ARL E+Y A+ L  EA+   +++   YP   W
Sbjct: 215 SNTRHVEEALARLTESYYAMGLTSEAQTAAAVLGTNYPDSSW 256


>gi|323137883|ref|ZP_08072958.1| outer membrane assembly lipoprotein YfiO [Methylocystis sp. ATCC
           49242]
 gi|322396886|gb|EFX99412.1| outer membrane assembly lipoprotein YfiO [Methylocystis sp. ATCC
           49242]
          Length = 302

 Score =  162 bits (409), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 126/213 (59%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y + +  LK++++  A + F    + +P +  +RK+LLM+ F Q+  G Y ++    +
Sbjct: 66  DLYNQGLAKLKKKDYEGAAKKFGDLEKQYPSSEWSRKALLMTTFAQFQKGAYDESVQSAQ 125

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            YI  YP S +  YVYYL GMS+   + DV  DQ+  +  L+  ++++++Y  S YV  A
Sbjct: 126 RYIGLYPNSADTPYVYYLAGMSFYNQVPDVMRDQQPAEKALEVFTQLIQKYPKSEYVTDA 185

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
           R+ + V R+QLAAKE+ +GR+YL R  Y AAI RF  VL  Y    H EEA+ RL EAY+
Sbjct: 186 RYKIQVTRDQLAAKEMNVGRFYLTRKNYPAAINRFHDVLGKYQTTRHTEEALYRLTEAYM 245

Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           A+ + +EA+   +++   +P   W +    L+K
Sbjct: 246 AMGVTNEAQTAAAILGHNFPDSQWYKDAHALLK 278


>gi|222149127|ref|YP_002550084.1| hypothetical protein Avi_2880 [Agrobacterium vitis S4]
 gi|221736112|gb|ACM37075.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 289

 Score =  160 bits (404), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 80/203 (39%), Positives = 126/203 (62%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y + +  +K  N ++A   F+   +  PF+  ++K+L+MS FV+Y  GKY +A S G  
Sbjct: 53  LYNQGLANIKAGNLAEASRKFDAVDKQNPFSDWSQKALVMSTFVKYRQGKYTEAISTGTR 112

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           Y+T YP +K+  YV YL+G+S  + I +V  DQ+ +   L+ M ++V+ Y  S YV  A+
Sbjct: 113 YMTLYPSTKDSAYVQYLIGLSNWRQIPNVTQDQKFSSRTLEAMDKVVKNYPTSEYVSDAQ 172

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             +   R+QLA KE++IGRYYL+R EY+A+I RF+ V+  Y      EEA+ARLVEAY A
Sbjct: 173 EKMRFARDQLAGKEMQIGRYYLERKEYLASIQRFRNVVEQYPTTNQIEEALARLVEAYYA 232

Query: 240 LALMDEAREVVSLIQERYPQGYW 262
           + ++ EA+   +++   YP   W
Sbjct: 233 MGVVQEAQTAAAVLGHNYPDSKW 255


>gi|83858907|ref|ZP_00952429.1| competence lipoprotein ComL, putative [Oceanicaulis alexandrii
           HTCC2633]
 gi|83853730|gb|EAP91582.1| competence lipoprotein ComL, putative [Oceanicaulis alexandrii
           HTCC2633]
          Length = 277

 Score =  159 bits (402), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 76/203 (37%), Positives = 127/203 (62%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y +A   ++ + + +A  YF++  R  PF+  AR+S+LM+A+  Y   KY +A S  + 
Sbjct: 38  LYAEAFDKMQRRRYDEAAAYFDEVERQHPFSEWARRSMLMAAYANYRQSKYDEAISDAQR 97

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           +I  +P + +  Y YYL+ +SY + I DV  DQ  T+  LQ + ++V RY ++PY + AR
Sbjct: 98  FIALHPGNASAPYAYYLIALSYYERIYDVGRDQSTTQQALQALEQVVRRYPDTPYAQDAR 157

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             + + R+ LA KE+ +GR+YL+ G ++AAI RFQ V+ +Y    H  EA+ RLVEAYV+
Sbjct: 158 LKIDMTRDHLAGKEMSVGRWYLRNGYHLAAINRFQNVIRDYETTSHTPEALHRLVEAYVS 217

Query: 240 LALMDEAREVVSLIQERYPQGYW 262
           L + +EAR++ +++   +P   W
Sbjct: 218 LGVDEEARQIAAVLGYNFPGSEW 240


>gi|319408816|emb|CBI82473.1| competence lipoprotein precursor [Bartonella schoenbuchensis R1]
          Length = 292

 Score =  158 bits (400), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 84/212 (39%), Positives = 125/212 (58%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y +A+  L    F +A + F+   + + +    RKSL+M AFV Y   KY  A S+ + 
Sbjct: 55  LYNQALTNLDLGRFDEALKKFSIIEKQYAYTEWGRKSLVMGAFVSYRLAKYDDAISMAQR 114

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           YIT YP + +  Y YY+VG+S    IRDV  DQR TK  +  M  ++ERY NS YVK A+
Sbjct: 115 YITLYPNASDSAYAYYIVGLSSFHQIRDVTRDQRDTKRAIAAMQLLIERYPNSEYVKDAK 174

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             +  GR QLA KE+++GRYY +  +Y+AA  RF+ V+  YSD    EEA+ RL E  +A
Sbjct: 175 DKIRFGREQLAGKEMQVGRYYEEGRQYLAASRRFRTVVEEYSDTNQIEEALFRLTEVNLA 234

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           L L+ EA+   +++   YP+  W ++   L++
Sbjct: 235 LGLITEAQTAAAVLGRNYPESKWYKFSYDLLQ 266


>gi|159185041|ref|NP_355049.2| hypothetical protein Atu2084 [Agrobacterium tumefaciens str. C58]
 gi|159140315|gb|AAK87834.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 288

 Score =  158 bits (399), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 73/203 (35%), Positives = 124/203 (61%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y++ +  +   N ++A   F    + +PF    +K+L+M  F+     K   A + G  
Sbjct: 53  LYKQGLANMNAGNMTEASRKFEAIDKQYPFTEWGQKALVMQTFIATRTNKNDVAITSGSR 112

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           ++ QYP SK+  YV Y++G++Y++ I DV  DQRA +  ++ M+++V  Y +S YV  A+
Sbjct: 113 FLRQYPRSKDAAYVQYMIGLAYSKQISDVTQDQRAAQRTIEAMNKVVNDYPSSEYVADAQ 172

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             +   R+QLA +E+++GRYYL+R EY+AA+ RF++V+  Y +    EEA+ARL EAY A
Sbjct: 173 AKIRFARDQLAGREMQVGRYYLERKEYLAAVSRFRIVVEQYQNTNQIEEALARLTEAYYA 232

Query: 240 LALMDEAREVVSLIQERYPQGYW 262
           + L+DEA+   +++   YP   W
Sbjct: 233 MGLVDEAQTAAAVLGNNYPDSQW 255


>gi|325293455|ref|YP_004279319.1| lipoprotein [Agrobacterium sp. H13-3]
 gi|325061308|gb|ADY64999.1| lipoprotein [Agrobacterium sp. H13-3]
          Length = 288

 Score =  157 bits (396), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 73/203 (35%), Positives = 123/203 (60%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y++ +  +   N ++A   F    + +PF    +K+L+M  F+     K   A + G  
Sbjct: 53  LYKQGLANMNAGNMTEASRKFEAIDKQYPFTEWGQKALVMQTFIATRTNKNDVAIASGSR 112

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           ++ QYP SK+  YV Y++G++Y++ I DV  DQRA +  ++ MS++V  Y +S YV  A+
Sbjct: 113 FLRQYPRSKDAAYVQYMIGLAYSKQISDVTQDQRAAQRTVEAMSKVVNDYPDSEYVADAQ 172

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             +   R+QLA +E+++GRYYL+R EY+AA+ RF++V+  Y +    EEA+ARL E+Y A
Sbjct: 173 AKIRFARDQLAGREMQVGRYYLERKEYLAAVSRFRIVVEQYQNTNQIEEALARLTESYYA 232

Query: 240 LALMDEAREVVSLIQERYPQGYW 262
           + L DEA+   +++   YP   W
Sbjct: 233 MGLSDEAQTAAAVLGNNYPDSQW 255


>gi|296445566|ref|ZP_06887522.1| outer membrane assembly lipoprotein YfiO [Methylosinus
           trichosporium OB3b]
 gi|296256971|gb|EFH04042.1| outer membrane assembly lipoprotein YfiO [Methylosinus
           trichosporium OB3b]
          Length = 292

 Score =  156 bits (395), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 78/212 (36%), Positives = 122/212 (57%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A+  L+ +++  A + F +  + +PF+  ARK LLM  F QYS   Y  A +  +
Sbjct: 56  DIYNQALAKLEAKDYETAAKKFGELEKQYPFSHWARKGLLMQTFAQYSKPSYDDAVASAQ 115

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            YI  YP S    Y+YYL GMSY   +  V  DQ   +  L   +++VE++  S YV   
Sbjct: 116 RYIGLYPTSPETPYMYYLAGMSYYNQVPGVMQDQETAQKALVIFNQLVEKFPKSEYVADV 175

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
           ++ + V R+QLAAK++ +GR+YL R  Y AA+ RF  VLA Y    HAEEA+ RL EAY 
Sbjct: 176 KYKIQVARDQLAAKDMSVGRFYLTRKNYPAAVNRFHDVLAKYQTTRHAEEALYRLTEAYF 235

Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLV 270
           A+ +++EA+   +++   +P   W +    L+
Sbjct: 236 AMGIVNEAQTAAAILGHNFPDSQWYKDAHELL 267


>gi|217979600|ref|YP_002363747.1| outer membrane assembly lipoprotein YfiO [Methylocella silvestris
           BL2]
 gi|217504976|gb|ACK52385.1| outer membrane assembly lipoprotein YfiO [Methylocella silvestris
           BL2]
          Length = 288

 Score =  155 bits (393), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 80/220 (36%), Positives = 125/220 (56%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
           S D Y   +       ++Y + +  LK +++  A + F    + +P++   RK L+M+ F
Sbjct: 36  SGDKYKPEILKDTPAEDLYNQGLARLKVRDYPAAAKSFAALDKQYPYSQWQRKGLIMTTF 95

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
            QY AG Y+ A    + YI  +P++ +VDY YYL  MSY   I D+  DQ  +       
Sbjct: 96  AQYQAGSYEDAIGSAKRYIGLFPQAADVDYAYYLEAMSYYNQIPDISRDQDRSAKAADLF 155

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
           ++I+E+Y  S YV  +R+ + V R+QLA KE+ +GR+YL +  YVAA+ RF+ VLA Y  
Sbjct: 156 AQIIEKYPKSEYVDDSRYKLQVTRDQLAGKEMMVGRFYLNQRNYVAAVGRFREVLAKYQT 215

Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
             HAEEA+ RL EAY+AL +  EA+   +++   +P   W
Sbjct: 216 TRHAEEALMRLTEAYLALGVPQEAQTAAAILGHNFPDSVW 255


>gi|90418186|ref|ZP_01226098.1| putative competence lipoprotein comL [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90337858|gb|EAS51509.1| putative competence lipoprotein comL [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 293

 Score =  155 bits (392), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 87/245 (35%), Positives = 132/245 (53%), Gaps = 1/245 (0%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDV-YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           K    +   +A   L G     + DV  L    +      +Y + +  L+     +A + 
Sbjct: 17  KLTGALALGLASAGLSGCMSSDTSDVEALALAAETDPPDVLYNQGLANLEGGRLGEATKK 76

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
           F    R  P++  ARK+L+MSAF  Y  G Y  A +  + Y++ YP S+   Y  Y++G+
Sbjct: 77  FEAIDRQHPYSEWARKALVMSAFASYRGGDYDTAINSSKRYLSLYPGSEEAAYAQYIMGL 136

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           +Y + I DV  DQ+        M  + E+Y +S Y   AR  + + R+QLA KE+++GRY
Sbjct: 137 AYYRQIPDVTRDQKEAARAAAAMREVFEKYPDSEYADDARAKLRIARDQLAGKEMQVGRY 196

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           YL+R EYVAAI RF+ V+  YSD+ H EEA+ARL EAY A+ L  EA+   S++ + +P 
Sbjct: 197 YLERREYVAAINRFKNVVDVYSDSRHVEEALARLTEAYYAMGLTREAQAAASVLGQNFPD 256

Query: 260 GYWAR 264
             W R
Sbjct: 257 SQWYR 261


>gi|114705261|ref|ZP_01438169.1| hypothetical protein FP2506_09991 [Fulvimarina pelagi HTCC2506]
 gi|114540046|gb|EAU43166.1| hypothetical protein FP2506_09991 [Fulvimarina pelagi HTCC2506]
          Length = 265

 Score =  155 bits (392), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 83/245 (33%), Positives = 136/245 (55%), Gaps = 1/245 (0%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAY 77
           + K +LT+  +       G       DV + ++     + EV Y + +  L+  N  +A 
Sbjct: 9   MRKASLTVLVAATAGLASGCMSDGGSDVDVLALAAQTERPEVLYNQGLANLEGGNLGEAS 68

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
             F    R  P+   ARK+L+M AF  Y +G Y++A +  + Y++ YP +++  Y  Y++
Sbjct: 69  AKFKAIDRQHPYTDWARKALVMGAFTSYRSGAYEEAINSSKRYLSLYPGTEDAAYAQYIM 128

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
           G+SY + I D+  DQ A     Q M  +++ Y +S YV  A+  + + R+QLA KE+++G
Sbjct: 129 GLSYWRQIPDITRDQTAAGRTAQAMRGVIDNYPDSEYVPDAQTKLRIARDQLAGKELQVG 188

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           RYY +R EYVAAI RF+ V+  Y +    EEA+ARL E Y+A+ L+ EA+   S++ + Y
Sbjct: 189 RYYQERNEYVAAINRFKNVVDVYPETRQVEEALARLTETYLAMGLVREAQASASVLGQNY 248

Query: 258 PQGYW 262
           P   W
Sbjct: 249 PDSQW 253


>gi|114570618|ref|YP_757298.1| DNA uptake lipoprotein-like protein [Maricaulis maris MCS10]
 gi|114341080|gb|ABI66360.1| DNA uptake lipoprotein-like protein [Maricaulis maris MCS10]
          Length = 276

 Score =  155 bits (391), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 76/203 (37%), Positives = 124/203 (61%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y  A   L  Q +  A   F++  R  P++  AR+++LM+A+  Y +  Y +A S  + 
Sbjct: 38  IYATAFESLDRQQYPLAAARFDEVERQHPYSEWARRAMLMAAYANYESNNYDEAISDAQR 97

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           +I+ +P ++N  Y YYL+ +S+ + I DV  DQ AT+  L  + ++V R+ +S Y   AR
Sbjct: 98  FISLHPGNRNAAYAYYLIAISHFEQIMDVGRDQAATQQALLSLEQVVRRFPDSRYATDAR 157

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             + + R+ LA KE+ +GR+YL+RG ++AAI RFQ VL  Y +  H  EA+ RLVE+YV+
Sbjct: 158 LKIDMTRDHLAGKEMSVGRWYLRRGYHLAAINRFQNVLREYGNTSHVPEALHRLVESYVS 217

Query: 240 LALMDEAREVVSLIQERYPQGYW 262
           L + +EAR+V S++   +P   W
Sbjct: 218 LGIDEEARQVASVLGYNFPGSDW 240


>gi|240850884|ref|YP_002972284.1| competence lipoprotein ComL precursor [Bartonella grahamii as4aup]
 gi|240268007|gb|ACS51595.1| competence lipoprotein ComL precursor [Bartonella grahamii as4aup]
          Length = 297

 Score =  154 bits (390), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 82/212 (38%), Positives = 122/212 (57%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y +A+  L+      A + F +  + + +    RKSL+M AF  Y  GKY  + S+ + 
Sbjct: 60  LYNQALASLESGKLGDASKKFLKIEKQYAYTDWGRKSLVMGAFTNYRLGKYDDSISMAQR 119

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           YIT YP S +  Y YY++G+S  + I DV  DQR TK  +  M  ++ERY NS YVK A+
Sbjct: 120 YITLYPGSTDSAYAYYIIGLSSFRRIPDVTRDQRDTKRAIAAMQLLIERYPNSEYVKDAK 179

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             +  GR QLA KE++IGRYY +   Y+AA  RF+ V+  YSD    EEA+ RL E  +A
Sbjct: 180 DKIRFGREQLAGKEMQIGRYYEEGRRYLAASRRFRTVVEEYSDTNQIEEALFRLTEVNLA 239

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           L L  EA+   +++   YP+  W ++   L++
Sbjct: 240 LGLTAEAQTAAAILGRNYPKSEWYKFSYNLLQ 271


>gi|163868705|ref|YP_001609917.1| competence lipoprotein precursor [Bartonella tribocorum CIP 105476]
 gi|161018364|emb|CAK01922.1| competence lipoprotein precursor [Bartonella tribocorum CIP 105476]
          Length = 297

 Score =  154 bits (390), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 82/212 (38%), Positives = 122/212 (57%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y + +  L+    + A + F +  + + +    RKSL+M AF  Y  GKY  + S+ + 
Sbjct: 60  LYNQGLASLESGRLADAAKKFLKIEKQYAYTDWGRKSLVMGAFTNYRLGKYDDSISMAQR 119

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           YIT YP S +  Y YY++G+S  + I DV  DQR TK  +  M  ++ERY NS YVK A+
Sbjct: 120 YITLYPGSTDSAYAYYIIGLSSFRRIPDVTRDQRDTKRAIAAMQLLIERYPNSEYVKDAK 179

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             +  GR QLA KE++IGRYY +   Y+AA  RF+ V+  YSD    EEA+ RL E  +A
Sbjct: 180 DKIRFGREQLAGKEMQIGRYYEEGRRYLAASRRFRTVVEEYSDTNQIEEALFRLTEVNLA 239

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           L L  EA+   +++   YPQ  W ++   L++
Sbjct: 240 LGLTAEAQTAAAILGRNYPQSEWYKFSYNLLQ 271


>gi|227822643|ref|YP_002826615.1| competence lipoprotein ComL [Sinorhizobium fredii NGR234]
 gi|227341644|gb|ACP25862.1| competence lipoprotein ComL [Sinorhizobium fredii NGR234]
          Length = 288

 Score =  154 bits (389), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 131/223 (58%), Gaps = 1/223 (0%)

Query: 41  QSSRDVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
           Q+  D+ +  +T      EV Y + +  L     ++A   F+   R  PF+  ARK+L+M
Sbjct: 33  QNDPDIDITKLTAETDPPEVLYNQGLANLNAGKTTEAGRKFDAIDRQHPFSEYARKALVM 92

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
           +AFV Y  G+YQ A +    Y+  YP+S++  Y  Y+ G++Y + I  V  DQ+  +  +
Sbjct: 93  NAFVAYRNGQYQDAINSTNRYLNLYPQSEDAAYAQYIQGLAYTKQIPSVTQDQKPAQRAI 152

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
           + M  +V++Y +S YV  A+  +   R+QLA KE+++GRYYL+R EY+AAI RF++V+  
Sbjct: 153 EAMQVVVDKYPDSEYVDDAQSKIRFARDQLAGKEMQVGRYYLERKEYLAAISRFRVVVEQ 212

Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           Y +    EEA+ARLVEAY ++ +  EA+   +++   YP   W
Sbjct: 213 YPNTNQVEEALARLVEAYFSMGVTAEAQTAAAVLGHNYPDSQW 255


>gi|158426191|ref|YP_001527483.1| putative lipoprotein precursor [Azorhizobium caulinodans ORS 571]
 gi|158333080|dbj|BAF90565.1| putative lipoprotein precursor [Azorhizobium caulinodans ORS 571]
          Length = 284

 Score =  153 bits (386), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 76/204 (37%), Positives = 118/204 (57%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y + +  L + +   A + F    +  P++  ARK+LLM  +V Y AGKY  A S G+
Sbjct: 48  KIYNEGLTLLNKGDLDGAAKRFEDIDKTHPYSEWARKALLMDTYVYYEAGKYDDAISAGK 107

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            Y+  +P S++  YV YLV  S    I D+  DQR T+  L  +  ++ +Y N+ Y  GA
Sbjct: 108 RYLALHPGSQDAPYVSYLVASSLYDSIPDISRDQRRTRQALDALDDVIRKYPNTEYAAGA 167

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
           +  V V R+QLA KE+ IGRYYL++  Y  AI RF++V+  Y      EEA+ R+ EAY+
Sbjct: 168 KRKVEVARDQLAGKEMLIGRYYLEQRNYTGAINRFKVVITQYQTTRQTEEALFRITEAYM 227

Query: 239 ALALMDEAREVVSLIQERYPQGYW 262
           AL +++EA+   +++   YP   W
Sbjct: 228 ALGIVNEAQTAAAVLGYNYPDSQW 251


>gi|154252872|ref|YP_001413696.1| DNA uptake lipoprotein [Parvibaculum lavamentivorans DS-1]
 gi|154156822|gb|ABS64039.1| DNA uptake lipoprotein [Parvibaculum lavamentivorans DS-1]
          Length = 291

 Score =  152 bits (383), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 76/204 (37%), Positives = 123/204 (60%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y KA+  +   ++  A + F++  R  P++  AR+S+LMSA+  Y   +Y +A    +
Sbjct: 57  QIYNKAMDHMAAGDYIPAAKEFDEVERQHPYSEWARRSMLMSAYAHYKINEYDEAILSAQ 116

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            +I+ +P +K+V Y YYL+G+SY + I DV  DQ+ T+  L     + +R+ +S Y + A
Sbjct: 117 RFISLHPSNKDVPYAYYLIGLSYYERISDVGRDQKMTENALNSFYELTQRFPSSEYSRDA 176

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
           R  + +  + LA KE+EIGRYYL R +YVAAI RF++V+  Y    H  EA+ RL EAY+
Sbjct: 177 RLKIDLTLDHLAGKEMEIGRYYLIRRDYVAAINRFRVVIEKYQTTTHTPEALERLTEAYL 236

Query: 239 ALALMDEAREVVSLIQERYPQGYW 262
           AL +  EA+   +++   YP   W
Sbjct: 237 ALGVKTEAQTAAAILGYNYPGSDW 260


>gi|146342490|ref|YP_001207538.1| TPR repeat-containing protein [Bradyrhizobium sp. ORS278]
 gi|146195296|emb|CAL79321.1| Conserved hypothetical protein; Putative Lipoprotein with
           tetratricopeptide repeat (TPR) domain [Bradyrhizobium
           sp. ORS278]
          Length = 297

 Score =  152 bits (383), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 132/248 (53%), Gaps = 6/248 (2%)

Query: 26  IFFSIAVCFLVG-WER-QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           + F +A C   G W++  +  D ++D   D  Y   +Y    +  ++++   A + F + 
Sbjct: 30  LAFPLAGCGTGGLWDKFLAKDDTFVDEPADKLYNEGLY----MLNEKKDMKGANKKFEEV 85

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
            R  P++  ARKSLLMSA+  Y AG Y         Y+T +P S +  Y  YL+  S+  
Sbjct: 86  DRQHPYSDWARKSLLMSAYASYQAGDYDGCIGSATRYVTLHPGSPDAAYAQYLIAASHYD 145

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
            I D+  DQ  T+  +  +  +V +Y NS Y   A+  +   R+QLA KE+++GRYY+++
Sbjct: 146 QIPDISRDQGRTEKAIAALEEVVRKYPNSEYATNAKAKMEGARDQLAGKEMDVGRYYMQK 205

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
            +Y AAI RF+ V+  Y    H EEA+ RL EAY+ + ++ EA+   +++   +P   W 
Sbjct: 206 RDYTAAINRFKTVVTQYQTTRHVEEALFRLTEAYMTIGIVGEAQTAAAVLGHNFPDSKWY 265

Query: 264 RYVETLVK 271
           +    LVK
Sbjct: 266 KDAYNLVK 273


>gi|150397273|ref|YP_001327740.1| hypothetical protein Smed_2072 [Sinorhizobium medicae WSM419]
 gi|150028788|gb|ABR60905.1| conserved hypothetical transmembrane protein [Sinorhizobium medicae
           WSM419]
          Length = 288

 Score =  151 bits (382), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 127/223 (56%), Gaps = 1/223 (0%)

Query: 41  QSSRDVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
           Q+  D+ +  +T      EV Y + +  L     ++A   F    +  PF+  ARK+L+M
Sbjct: 33  QNDPDIDITKLTAETDPPEVLYNQGLANLNAGKTTEAARKFEAIDKQHPFSEYARKALVM 92

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
           +AFV Y  G+YQ A +    Y+  YP+S++  Y  Y+ G++Y + I  V  DQR     +
Sbjct: 93  NAFVSYRNGQYQDAINSTNRYLNLYPQSEDAAYAQYIQGLAYTKQIPSVTQDQRPAMRAM 152

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
           + M  +V++Y +S YV  A+  +   R+QLA KE+++GRYYL+R EY+AAI RF+ V+  
Sbjct: 153 EAMQVVVDKYPDSEYVDDAQAKIRFARDQLAGKEMQVGRYYLERKEYLAAISRFRTVVER 212

Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           Y      EEA+ARLVEAY A+ +  EA+   +++   YP   W
Sbjct: 213 YPTTNQVEEALARLVEAYYAMGVTGEAQTAAAVLGHNYPDSQW 255


>gi|299131916|ref|ZP_07025111.1| outer membrane assembly lipoprotein YfiO [Afipia sp. 1NLS2]
 gi|298592053|gb|EFI52253.1| outer membrane assembly lipoprotein YfiO [Afipia sp. 1NLS2]
          Length = 314

 Score =  151 bits (382), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 88/273 (32%), Positives = 142/273 (52%), Gaps = 22/273 (8%)

Query: 5   LGRAICIFEAWAYQLYKFALTIFFSIAVCFLVG----WERQSSRD-VYLDSVTDVRYQRE 59
           LGR +C           FA+ +    A     G    W++  ++D  ++D   D     +
Sbjct: 34  LGRQLC-----------FAMGVIVLAAPLGGCGTGNLWDKFFAKDETFVDQPAD-----K 77

Query: 60  VYEKAVLFLKEQNFSK-AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           +Y + +  L E+N  K A + F +  R  P++  ARKSLLMSA+  Y +G Y +  +   
Sbjct: 78  LYNEGLFLLNEKNDRKGAIKKFEEVDRQHPYSDWARKSLLMSAYASYQSGDYDECIANAN 137

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            YI+ +P S +  Y  YLV +S    I DV  DQ  T+  +  +  ++ +Y NS Y   A
Sbjct: 138 RYISLHPGSPDAAYAQYLVAVSNYDQIPDVSRDQGRTEKAIAALEEVIRKYPNSEYATTA 197

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
           +  +   R+QLA +E+ IGRYY+ + +Y  AI RF++V+  Y    H EEA+ARL EAY+
Sbjct: 198 KKKIEGARDQLAGREMTIGRYYMDKRDYTGAINRFKVVVTQYQTTRHVEEALARLTEAYM 257

Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           A+ ++ EA+   +++   +P   W +    LVK
Sbjct: 258 AIGVVSEAQTAAAVLGHNFPDSRWYKDAYNLVK 290


>gi|49474448|ref|YP_032490.1| competence lipoprotein comL precursor [Bartonella quintana str.
           Toulouse]
 gi|49239952|emb|CAF26357.1| Competence lipoprotein comL precursor [Bartonella quintana str.
           Toulouse]
          Length = 297

 Score =  151 bits (382), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 82/212 (38%), Positives = 121/212 (57%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y +A+  L      +A + F    + + +    RKSL+M AF  Y   KY +A S+ + 
Sbjct: 60  LYNQALANLDSGRLGEASKKFLTIEKQYAYTEWGRKSLVMGAFTNYQLAKYDEAISMAQR 119

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           YIT YP S +  Y YY++G+S    I DV  DQR TK  +  M  +VERY +S YVK A+
Sbjct: 120 YITLYPGSDDSAYAYYIIGLSSFCRIPDVTRDQRDTKRAIAAMQLLVERYPDSEYVKDAK 179

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             + +GR QLA KE+++GRYY +   Y+AA  RF+ V+  YSD    EEA+ RL E  +A
Sbjct: 180 AKIRIGREQLAGKEMQVGRYYEEGRRYLAASRRFRKVVEEYSDTNQIEEALFRLTEVNLA 239

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           L L  EA+   +++   YP+  W ++   L+K
Sbjct: 240 LGLTAEAQTAAAILGRNYPKSEWYKFSYNLLK 271


>gi|254470086|ref|ZP_05083490.1| outer membrane assembly lipoprotein YfiO [Pseudovibrio sp. JE062]
 gi|211960397|gb|EEA95593.1| outer membrane assembly lipoprotein YfiO [Pseudovibrio sp. JE062]
          Length = 288

 Score =  151 bits (381), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 84/245 (34%), Positives = 138/245 (56%), Gaps = 2/245 (0%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
           + S+A+  +V     +++D   D   D      ++ +A+      + S A + F +  R 
Sbjct: 22  YASLALALVVAG--CATKDDVDDLALDETPAEVMFNEALALRASGDISGAAKKFYELDRV 79

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
           +P++  ARKSL+  A++ +  GKY +A +  E + T YP +K+  Y  +++G SY + I 
Sbjct: 80  YPYSEFARKSLINIAYLNFKMGKYPEAVAAAERFTTLYPGNKDSAYALFIIGESYFRQIP 139

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
           DV  DQ  T   L  M  +V+RY +S Y K AR  +    +QLA KE+E+GRYYL R  Y
Sbjct: 140 DVGRDQAVTAKALDAMREVVQRYPDSEYTKQARQRIRATEDQLAGKEMEVGRYYLARRNY 199

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
           +A+I RF++V+ NY    H EEA+ RL E+Y AL + +EA+   +++   +PQ  W +  
Sbjct: 200 LASINRFKVVVTNYQTTRHVEEALYRLTESYYALGVTNEAQTAAAVLGHNFPQSQWYQDA 259

Query: 267 ETLVK 271
            +L+K
Sbjct: 260 YSLLK 264


>gi|328542974|ref|YP_004303083.1| DNA uptake lipoprotein-like protein [polymorphum gilvum
           SL003B-26A1]
 gi|326412720|gb|ADZ69783.1| DNA uptake lipoprotein-like protein [Polymorphum gilvum
           SL003B-26A1]
          Length = 286

 Score =  151 bits (381), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 76/199 (38%), Positives = 121/199 (60%)

Query: 73  FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
            S A + F++  + +P++  ARKSL+  AF+ +S G+Y +A +  E + T YP S++  Y
Sbjct: 64  LSDAGKKFSELDKLYPYSEYARKSLINLAFINFSLGRYPEAIAASERFTTLYPGSEDSAY 123

Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
             Y++G SY + I DV  DQ  T+  L  ++ ++ RY +S Y   A+  V V  +QLA K
Sbjct: 124 ALYIIGQSYFRQIPDVTRDQEQTEKALSALNELIRRYPDSEYTADAKSKVLVAYDQLAGK 183

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           E+++GRYYL R  Y+AAI RF++V+ NY    H EEA+ RL E+Y AL +++EA+   ++
Sbjct: 184 EMQVGRYYLDRRNYIAAINRFKMVVINYQTTRHVEEALFRLTESYYALGVVNEAQTAAAV 243

Query: 253 IQERYPQGYWARYVETLVK 271
           +   YP   W +    L+K
Sbjct: 244 LGHNYPDSRWYKDAFALLK 262


>gi|15965919|ref|NP_386272.1| hypothetical protein SMc01876 [Sinorhizobium meliloti 1021]
 gi|307308229|ref|ZP_07587938.1| outer membrane assembly lipoprotein YfiO [Sinorhizobium meliloti
           BL225C]
 gi|307319696|ref|ZP_07599121.1| outer membrane assembly lipoprotein YfiO [Sinorhizobium meliloti
           AK83]
 gi|15075188|emb|CAC46745.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
 gi|306894627|gb|EFN25388.1| outer membrane assembly lipoprotein YfiO [Sinorhizobium meliloti
           AK83]
 gi|306901227|gb|EFN31833.1| outer membrane assembly lipoprotein YfiO [Sinorhizobium meliloti
           BL225C]
          Length = 288

 Score =  150 bits (380), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 76/203 (37%), Positives = 119/203 (58%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y + +  L     ++A   F    +  PF+  ARK+L+M+AFV Y  G+YQ A +    
Sbjct: 53  LYNQGLANLNAGKTTEAARKFEAIDKQHPFSEYARKALVMNAFVAYRNGQYQDAINSTNR 112

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           Y+  YP+S++  Y  Y+ G++Y + I  V  DQR     ++ M  +V++Y +S YV  A+
Sbjct: 113 YLNLYPQSEDAAYAQYIQGLAYTKQIPSVTQDQRPAAKAIEAMQVVVDKYPDSEYVDDAQ 172

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             +   R+QLA KE+++GRYYL+R EY+AAI RF+ V+  Y      EEA+ARLVEAY A
Sbjct: 173 AKIRFARDQLAGKEMQVGRYYLERKEYLAAISRFRTVVERYPTTNQVEEALARLVEAYYA 232

Query: 240 LALMDEAREVVSLIQERYPQGYW 262
           + +  EA+   +++   YP   W
Sbjct: 233 MGVTGEAQTAAAVLGHNYPDSQW 255


>gi|304392248|ref|ZP_07374190.1| lipoprotein [Ahrensia sp. R2A130]
 gi|303296477|gb|EFL90835.1| lipoprotein [Ahrensia sp. R2A130]
          Length = 278

 Score =  150 bits (380), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 75/204 (36%), Positives = 123/204 (60%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           + Y +A+  L   N S+A + F +  R  P++  A+K+ +MS ++ Y + +Y +A + G+
Sbjct: 42  QTYNEALANLDAGNSSEAKKKFAKLDRQHPYSNYAKKAGVMSTYLAYRSAEYPEAIARGK 101

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            ++  YP +    Y  YLVGMS+ + I DV  DQ + K   Q MS +V+RY  S YV+ A
Sbjct: 102 RFVQLYPSNAEAPYALYLVGMSHFRQINDVTRDQDSAKAAYQAMSNLVQRYPESEYVEDA 161

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
           +  + + ++QLA KE+ +GRYY +R EY+A+I R++ V+  + D  H EEA+ARL E+Y 
Sbjct: 162 KRKMRISKDQLAGKEMLVGRYYQERREYLASINRYRTVVEQFEDTRHVEEALARLTESYY 221

Query: 239 ALALMDEAREVVSLIQERYPQGYW 262
           AL L  EA+   +++   +P   W
Sbjct: 222 ALGLQSEAQTAAAVLGHNFPDSQW 245


>gi|49475847|ref|YP_033888.1| competence lipoprotein comL precursor [Bartonella henselae str.
           Houston-1]
 gi|49238655|emb|CAF27901.1| Competence lipoprotein comL precursor [Bartonella henselae str.
           Houston-1]
          Length = 297

 Score =  149 bits (377), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 89/254 (35%), Positives = 138/254 (54%), Gaps = 11/254 (4%)

Query: 24  LTIFFSIAVCFLVG--WERQSSRD----VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           L + F  + C L G  ++ +++ D    V      DV     +Y +A+  L+    + A 
Sbjct: 23  LGMIFLGSTCILAGCLFKEKNTLDPSAYVLKIDPPDV-----LYNQALASLESGRLADAS 77

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           + F    + + +    RKSL+M AF  Y   KY  + S+ + YIT YPE+ +  Y YY++
Sbjct: 78  KKFLIIEKQYAYTDWGRKSLVMGAFTNYRLEKYDDSISMAQRYITLYPEADDAAYAYYII 137

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
           G+S  + I DV  DQR TK  +  M  ++ERY NS YVK A+  +  GR QLA KE+++G
Sbjct: 138 GLSSFRRIPDVTRDQRDTKRAIAAMQLLIERYPNSEYVKDAKAKIRFGREQLAGKEMQVG 197

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           RYY +   Y+AA  RF+ V+  YSD    EEA+ RL E  +AL L  EA+   +++   Y
Sbjct: 198 RYYEEGRRYLAASRRFRKVVEEYSDTNQIEEALFRLTEVNLALGLTLEAQTAAAILGRNY 257

Query: 258 PQGYWARYVETLVK 271
           P+  W ++   L++
Sbjct: 258 PKSEWYKFSYNLLQ 271


>gi|295688858|ref|YP_003592551.1| outer membrane assembly lipoprotein YfiO [Caulobacter segnis ATCC
           21756]
 gi|295430761|gb|ADG09933.1| outer membrane assembly lipoprotein YfiO [Caulobacter segnis ATCC
           21756]
          Length = 315

 Score =  148 bits (374), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 76/203 (37%), Positives = 115/203 (56%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y      L   N+++A +YF +  R  P++  +R+S+LM+ +  Y    Y  A    + 
Sbjct: 53  LYSTGADRLDRGNWNEAVDYFREVERQHPYSEWSRRSILMTGYAHYMGNNYNDAIGDADR 112

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           +I+ YP + +  Y YYL  + Y + I DV  DQ AT+  L  +  +V+RY NS Y   AR
Sbjct: 113 FISLYPGNPSASYAYYLKAVCYFEQIVDVNRDQAATEQALAALRDVVQRYPNSEYATDAR 172

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             + +  +QLA KE+ IGRYYLK G+ +AAI RF+ VL  +    H  EA+ RLVEAY+ 
Sbjct: 173 LKIDMVNDQLAGKEMAIGRYYLKNGQTLAAIGRFKAVLERHQTTSHTPEALYRLVEAYLT 232

Query: 240 LALMDEAREVVSLIQERYPQGYW 262
           L LMDEA+   +++   +P   W
Sbjct: 233 LGLMDEAKRNGAVLGYNFPGDRW 255


>gi|209884392|ref|YP_002288249.1| coml, competence lipoprotein [Oligotropha carboxidovorans OM5]
 gi|209872588|gb|ACI92384.1| coml, competence lipoprotein [Oligotropha carboxidovorans OM5]
          Length = 281

 Score =  148 bits (374), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 136/250 (54%), Gaps = 6/250 (2%)

Query: 24  LTIFFSIAVCFLVG-WERQSSRD-VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
           +T+   +  C     W++  ++D  ++D   D  Y   +Y    L  ++++   A + F 
Sbjct: 12  ITLAAPLGGCGTGNLWDKFFAKDETFVDQPADKLYNEGLY----LLNEKKDRKGALKKFE 67

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
           +  R  P++  ARKSLLMSA+  Y +G Y +  +    YI+ +P S +  Y  YLV +S+
Sbjct: 68  EVDRQHPYSDWARKSLLMSAYAAYESGDYDECIASANRYISLHPGSPDAAYAQYLVAVSH 127

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
              I DV  DQ  T+  +  +  +V +Y NS Y   A+  +   R+QLA +E+ IGRYY+
Sbjct: 128 YDQIPDVSRDQTRTEKAIASLEEVVRKYPNSEYATTAKKKIEGARDQLAGREMTIGRYYM 187

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           ++ +Y  AI RF++V+  Y    H EEA+ARL EAY+A+ ++ EA+   +++   +P   
Sbjct: 188 EKRDYTGAINRFKVVVTQYQTTRHVEEALARLTEAYMAIGVVSEAQTAAAVLGHNFPDSR 247

Query: 262 WARYVETLVK 271
           W +    LV+
Sbjct: 248 WYKDAYNLVR 257


>gi|148257409|ref|YP_001241994.1| hypothetical protein BBta_6164 [Bradyrhizobium sp. BTAi1]
 gi|146409582|gb|ABQ38088.1| hypothetical protein BBta_6164 [Bradyrhizobium sp. BTAi1]
          Length = 297

 Score =  148 bits (373), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 128/241 (53%), Gaps = 6/241 (2%)

Query: 33  CFLVG-WER-QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
           C   G W++  +  D ++D   D  Y   +Y    L  ++++   A + F +  R  P++
Sbjct: 37  CGTGGLWDKFLAKDDTFVDEPADKLYNEGLY----LMNEKKDVKGATKKFEEVDRQHPYS 92

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
             ARKSLLMSA+  Y AG Y         Y+T +P S +  Y  YL+  S+   I D+  
Sbjct: 93  DWARKSLLMSAYASYQAGDYDGCIGAATRYVTLHPGSPDAAYAQYLIAASHYDQIPDISR 152

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
           DQ  T+  +  +  +V +Y NS Y   A+  +   R+QLA KE+++GRYY+++ +Y AAI
Sbjct: 153 DQGRTEKAIAALEEVVRKYPNSEYATNAKAKMEGARDQLAGKEMDVGRYYMQKRDYTAAI 212

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
            RF+ V+  Y    H EEA+ RL EAY+ + ++ EA+   +++   +P   W +    LV
Sbjct: 213 NRFKAVVTQYQTTRHVEEALYRLTEAYMTIGIVGEAQTAAAVLGHNFPDSKWYKDAYNLV 272

Query: 271 K 271
           K
Sbjct: 273 K 273


>gi|288958800|ref|YP_003449141.1| lipoprotein [Azospirillum sp. B510]
 gi|288911108|dbj|BAI72597.1| lipoprotein [Azospirillum sp. B510]
          Length = 271

 Score =  147 bits (372), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 78/244 (31%), Positives = 135/244 (55%), Gaps = 10/244 (4%)

Query: 20  YKFALT-IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           Y+  LT I  S A+         +  D Y++   D     ++  +A   ++++ F KA +
Sbjct: 6   YRLPLTAILLSAALSACSS----TKEDAYVERPAD-----QLLSEADAAMRDEAFKKAAK 56

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            +++  R  P++  A K+ L++A+  Y   KY  A    + +I  +P S +VDY YY+  
Sbjct: 57  LYDEVERQHPYSDSASKAQLLAAYAHYQDLKYDDAILALDRFIQLHPGSPDVDYAYYMRA 116

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           +SY + I DV  DQ+ T+  L  +  +V R+ +S Y + A+  + +  + LA KE+E+GR
Sbjct: 117 LSYYEQITDVRRDQKMTRQALDALQEVVRRFPDSKYARDAKLKIDLTNDHLAGKEMEVGR 176

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           +YL++ +Y AAI RF++V+ NY    H  EA+ RLVE Y+AL + DEA+   +++   +P
Sbjct: 177 FYLRQRQYTAAINRFRVVVENYQTTSHVPEALHRLVECYLALGVTDEAKAAAAVLGHNFP 236

Query: 259 QGYW 262
              W
Sbjct: 237 GSEW 240


>gi|163794453|ref|ZP_02188424.1| DNA uptake lipoprotein [alpha proteobacterium BAL199]
 gi|159180177|gb|EDP64700.1| DNA uptake lipoprotein [alpha proteobacterium BAL199]
          Length = 286

 Score =  147 bits (372), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 77/204 (37%), Positives = 118/204 (57%), Gaps = 4/204 (1%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E YE A+    +  F KA   F++  R  P++  A ++ LM+A+  Y A KY ++ +  +
Sbjct: 56  EAYEAAL----KGEFKKAAPLFDEVERQHPYSIWATQAQLMAAYSLYQANKYTESVNALD 111

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            +I   P + NVDY YYL G+ Y + I DV  DQ+ TK  L+    +++R+  S + + A
Sbjct: 112 RFIQLNPSNPNVDYAYYLKGLCYYEQIVDVGRDQKLTKQALESFDEVIKRFPTSKFARDA 171

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
           R  + + RN LA KE+ IGR+YL+RG+++AAI RFQ V+  +   +   EA+ RL EAY 
Sbjct: 172 RLKIDLTRNHLAGKEMAIGRWYLERGQHLAAINRFQKVVEQFDTTDQVPEALLRLTEAYT 231

Query: 239 ALALMDEAREVVSLIQERYPQGYW 262
           AL L  EA+   S++   YP   W
Sbjct: 232 ALGLTGEAKRTASVLGYNYPGTEW 255


>gi|86749129|ref|YP_485625.1| putative lipoprotein [Rhodopseudomonas palustris HaA2]
 gi|86572157|gb|ABD06714.1| putative lipoprotein [Rhodopseudomonas palustris HaA2]
          Length = 301

 Score =  147 bits (372), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 79/236 (33%), Positives = 126/236 (53%), Gaps = 6/236 (2%)

Query: 38  WER--QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
           W++      D + D   D  Y   +Y    L  KE++   A + F +  R  P++  ARK
Sbjct: 46  WDKFLAKDEDKFNDEPADKLYNEGLY----LMNKEKDLKGASKKFEEVDRQHPYSDWARK 101

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           SLLMSA+  Y AG Y         Y+T +P S +  Y  YL+  S+   I D+  DQ  T
Sbjct: 102 SLLMSAYSFYQAGDYDSCIGSATRYVTLHPGSPDAAYAQYLIAASHYDQIPDISRDQGRT 161

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           +  +  +  ++ +Y  S Y   A+  +   R+QLA KE+++GR+Y+++ +Y AAI RF+ 
Sbjct: 162 EKAIAALEEVIRKYPTSEYANQAKQKLEGARDQLAGKEMDVGRFYMEKRDYAAAINRFKT 221

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           V+  Y    H EEA+ARL EAY+A+ ++ EA+   +++   +P   W +   TLVK
Sbjct: 222 VVTRYQTTRHVEEALARLTEAYMAIGIVGEAQTAAAVLGHNFPDSRWYKDAYTLVK 277


>gi|154244287|ref|YP_001415245.1| putative lipoprotein [Xanthobacter autotrophicus Py2]
 gi|154158372|gb|ABS65588.1| putative lipoprotein [Xanthobacter autotrophicus Py2]
          Length = 284

 Score =  147 bits (372), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 74/204 (36%), Positives = 118/204 (57%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y + +  L+ Q   KA + F    +  P++  ARKSLLM+ +  + AGKY +A + G+
Sbjct: 48  KIYNEGLTLLRRQEPEKAAKRFEDVDKTHPYSEWARKSLLMTTYAYFEAGKYDEAIATGK 107

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            YI  YP S++  Y +YLV  +  + I D+  DQR T+  L  +  +  +Y N+ Y   A
Sbjct: 108 RYIALYPGSQDAAYAHYLVASALYENIPDITRDQRKTRQALDALEDVARKYPNTEYAATA 167

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
           +  + V R+QLA KE+ IGRYYL++  Y  AI RF++V+  Y      EEA+ RL EAY+
Sbjct: 168 KKKIEVARDQLAGKEMLIGRYYLEQRNYTGAINRFKVVVTQYQTTRQVEEALYRLTEAYM 227

Query: 239 ALALMDEAREVVSLIQERYPQGYW 262
           AL ++ EA+   +++   +P   W
Sbjct: 228 ALGVVSEAQTAAAVLGYNFPDSSW 251


>gi|260577083|ref|ZP_05845061.1| outer membrane assembly lipoprotein YfiO [Rhodobacter sp. SW2]
 gi|259020661|gb|EEW23979.1| outer membrane assembly lipoprotein YfiO [Rhodobacter sp. SW2]
          Length = 280

 Score =  147 bits (372), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 84/230 (36%), Positives = 134/230 (58%), Gaps = 5/230 (2%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ-NFSKAYEYFNQCSRDF 87
           ++ V  L G     +++V LDS+T      E+Y++    L+ +   ++A  YF +  R +
Sbjct: 14  ALIVATLAGCGGGGTKEVPLDSLT----AEEIYKRGEYALETRPKPTEAIRYFTEVERLY 69

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
           P+   A+++L+M AF  + + KY++A S  + Y+  YP  ++  Y  YL+ +SY   I D
Sbjct: 70  PYTEWAKRALIMQAFTYHKSKKYEEARSAAQRYLDYYPGDEDAGYAKYLLALSYYDQIDD 129

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
           V  DQ  T   LQ +  ++E Y ++ Y + A     +  +QLAAKE+EIGRYYLKRG Y 
Sbjct: 130 VGRDQGVTFQALQALRAVIEEYPDTEYARSAILKFDMAFDQLAAKEMEIGRYYLKRGNYS 189

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           AAI RF++V+ ++    H  EA+ RLVEAY+AL L DEA+   +++   Y
Sbjct: 190 AAINRFRVVVQDFQTTTHTAEALHRLVEAYLALGLTDEAQTAGAILGYNY 239


>gi|90424787|ref|YP_533157.1| putative lipoprotein [Rhodopseudomonas palustris BisB18]
 gi|90106801|gb|ABD88838.1| putative lipoprotein [Rhodopseudomonas palustris BisB18]
          Length = 289

 Score =  147 bits (372), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 79/235 (33%), Positives = 125/235 (53%), Gaps = 5/235 (2%)

Query: 38  WERQSSRD-VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           W++  ++D  Y D   D  Y   +Y    L  K ++   A + F +  R  P++  ARKS
Sbjct: 35  WDKFMTKDETYTDEPADKLYNEGLY----LMNKGKDPKAASKKFEEVDRQHPYSDWARKS 90

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
           LLMSA+  Y AG Y         Y+T +P S +  Y  YL+  S+   I D+  DQ  T+
Sbjct: 91  LLMSAYAFYEAGDYDSCIGSATRYVTMHPGSPDAAYAQYLIAASHYDQIPDISRDQGRTE 150

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             +  +  ++ +Y  S Y   A+  +   R+QLA KE+ +GRYY+++ +Y AAI RF+ V
Sbjct: 151 KAIAALEEVIRKYPTSEYATSAKKKLEGARDQLAGKEMNVGRYYMEKRDYTAAINRFKTV 210

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           +  Y    H EEA+ARL EAY+A+ ++ EA+   +++   +P   W +    LVK
Sbjct: 211 VTRYQTTRHVEEALARLTEAYMAIGIVGEAQTAAAVLGHNFPDSKWYQDAYNLVK 265


>gi|316933197|ref|YP_004108179.1| outer membrane assembly lipoprotein YfiO [Rhodopseudomonas
           palustris DX-1]
 gi|315600911|gb|ADU43446.1| outer membrane assembly lipoprotein YfiO [Rhodopseudomonas
           palustris DX-1]
          Length = 302

 Score =  147 bits (371), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 130/250 (52%), Gaps = 6/250 (2%)

Query: 24  LTIFFSIAVCFLVG-WER-QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
           L +   +  C     W++  +  D  +D   D  Y   +Y    L  ++++   A + F 
Sbjct: 33  LALSLPLGGCGTGALWDKFLAKDDKMVDEPADKLYNEGLY----LMNQDKDTKGAAKKFE 88

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
           +  R  P++  ARKSLLMSA+  Y AG Y         Y+T +P S +  Y  YL+  S+
Sbjct: 89  EVDRQHPYSDWARKSLLMSAYAYYQAGDYDSCIGAATRYVTLHPGSPDAAYAQYLIAASH 148

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
              I D+  DQ  T+  +  +  ++ +Y  S Y   A+  +   R+QLA KE+++GRYY+
Sbjct: 149 YDQIPDISRDQGRTEKAIASLEEVIRKYPTSEYANSAKQKLEGARDQLAGKEMDVGRYYM 208

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + +Y AAI RF+ V+  Y    H EEA+ARL EAY+A+ ++ EA+   +++   +P   
Sbjct: 209 SKRDYAAAINRFKTVVTRYQTTRHVEEALARLTEAYMAIGIVGEAQTAAAVLGHNFPDSK 268

Query: 262 WARYVETLVK 271
           W +   TLVK
Sbjct: 269 WYKDAYTLVK 278


>gi|115524131|ref|YP_781042.1| putative lipoprotein [Rhodopseudomonas palustris BisA53]
 gi|115518078|gb|ABJ06062.1| putative lipoprotein [Rhodopseudomonas palustris BisA53]
          Length = 301

 Score =  146 bits (369), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 79/235 (33%), Positives = 125/235 (53%), Gaps = 5/235 (2%)

Query: 38  WERQSSRD-VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           W++  ++D  Y D   D  Y   +Y    L  + ++   A + F +  R  P++  ARKS
Sbjct: 47  WDKFLTKDETYTDEPADKLYNEGLY----LMNQSKDPKAASKKFEEVDRQHPYSDWARKS 102

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
           LLMSA+  Y AG Y         Y+T +P S +  Y  YL+  S+   I D+  DQ  T+
Sbjct: 103 LLMSAYAYYEAGDYDNCIGSATRYVTMHPGSADAAYAQYLIAASHYDQIPDISRDQGRTE 162

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             +  +  ++ +Y  S Y   A+  +   R+QLA KE+ +GRYY++R +Y AAI RF+ V
Sbjct: 163 KAMAALEEVIRKYPTSEYATTAKKKLEGARDQLAGKEMAVGRYYMERRDYTAAINRFKTV 222

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           +  Y    H EEA+ARL EAY+A+ ++ EA+   +++   +P   W +    LVK
Sbjct: 223 VTRYQTTRHVEEALARLTEAYMAIGIVGEAQTAAAVLGHNFPDSRWYKDAYNLVK 277


>gi|91977850|ref|YP_570509.1| putative lipoprotein [Rhodopseudomonas palustris BisB5]
 gi|91684306|gb|ABE40608.1| putative lipoprotein [Rhodopseudomonas palustris BisB5]
          Length = 301

 Score =  146 bits (368), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 79/236 (33%), Positives = 124/236 (52%), Gaps = 6/236 (2%)

Query: 38  WER--QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
           W++      D + D   D  Y   +Y    L  KE++   A + F +  R  P++  ARK
Sbjct: 46  WDKFLAKDEDKFNDEPADKLYNEGLY----LMNKEKDLKAASKKFEEVDRQHPYSDWARK 101

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           SLLMSA+  Y AG Y         Y+T +P S +  Y  YL+  S+   I DV  DQ  T
Sbjct: 102 SLLMSAYSFYQAGDYDSCIGSATRYVTLHPGSPDAAYAQYLIAASHYDQIPDVSRDQGRT 161

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           +  +  +  ++ +Y  S Y   A+  +   R+QLA KE+++GRYY+++ +Y AAI RF+ 
Sbjct: 162 EKAIAALEEVIRKYPTSEYANQAKQKLEGARDQLAGKEMDVGRYYMQKRDYTAAINRFKT 221

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           V+  Y    H EEA+ARL EAY+ + ++ EA+   +++   +P   W +    LVK
Sbjct: 222 VVTRYQTTRHVEEALARLTEAYMTIGIVGEAQTAAAVLGHNFPDSRWYKDAYNLVK 277


>gi|121602062|ref|YP_989220.1| putative lipoprotein [Bartonella bacilliformis KC583]
 gi|120614239|gb|ABM44840.1| putative lipoprotein [Bartonella bacilliformis KC583]
          Length = 279

 Score =  145 bits (367), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 117/212 (55%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           VY +A+         +A + F+       +    RKSL+MSA   Y   KY  A S  + 
Sbjct: 42  VYAQALSHFHSGKLDEALKKFSIIEEQHAYTEWGRKSLIMSASTNYRLAKYDDAISAAQR 101

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           YIT YP + +  Y YYLVG+S  Q I  V  DQ+ TK  +  M  ++ERY  S YV  A+
Sbjct: 102 YITLYPTAGDAAYAYYLVGLSSFQQISHVTRDQQDTKRAIAAMQLLIERYPESDYVNDAK 161

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             +  GR QLA +E++IGRYY +  +Y+AA  RF+ V+  YSD +  EEA+ RL E   A
Sbjct: 162 AKILFGREQLAGQEMQIGRYYERGQQYLAASRRFRTVIEEYSDTKQIEEALFRLTEVSFA 221

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           L L++EA+    +++  YP+  W ++   L+K
Sbjct: 222 LGLIEEAQTAAVMLERYYPESSWYKFASDLLK 253


>gi|170744725|ref|YP_001773380.1| putative lipoprotein [Methylobacterium sp. 4-46]
 gi|168198999|gb|ACA20946.1| putative lipoprotein [Methylobacterium sp. 4-46]
          Length = 298

 Score =  145 bits (365), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 127/216 (58%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
           Y   V + R   ++Y + +  L++ ++ +A + F    +++ ++  +RK++LM+A+  Y 
Sbjct: 44  YKPEVIERRPADKIYSEGLAKLEDHDYDEAVKRFQNLDKEYAYSDWSRKAVLMTAYANYE 103

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
             KY+ A +  + Y+ ++P SK+  Y  Y++ MS+ + I DV  DQ  ++  L  +  +V
Sbjct: 104 GAKYEDAITAAKRYLQRHPGSKDAAYAQYILAMSHYKQIPDVTRDQERSERALAALQELV 163

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
           ++Y  S Y   A+  + + R+QLA KE+ +GRYYL R  + AAI RF+ V++ Y    HA
Sbjct: 164 QKYPTSEYAADAKAKIQITRDQLAGKEMTVGRYYLDRRNFPAAINRFREVVSKYQTTRHA 223

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           EEA+ RL EAY+AL ++ EA+   +++   +P   W
Sbjct: 224 EEALERLAEAYMALGIVAEAQTAAAVLAHNFPDSPW 259


>gi|192292404|ref|YP_001993009.1| outer membrane assembly lipoprotein YfiO [Rhodopseudomonas
           palustris TIE-1]
 gi|192286153|gb|ACF02534.1| outer membrane assembly lipoprotein YfiO [Rhodopseudomonas
           palustris TIE-1]
          Length = 302

 Score =  145 bits (365), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 82/254 (32%), Positives = 131/254 (51%), Gaps = 12/254 (4%)

Query: 26  IFFSIAVCFLVG-------WER-QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           IF  +A+   +G       W++  +  D  +D   D  Y   +Y    L  ++++   A 
Sbjct: 29  IFSLLALSLPLGGCGTGALWDKFLAKDDKMVDEPADKLYNEGLY----LMNQDKDTKGAA 84

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           + F +  R  P++  ARKSLLMSA+  Y AG Y         Y+T +P S +  Y  YL+
Sbjct: 85  KKFEEVDRQHPYSDWARKSLLMSAYAYYQAGDYDSCIGSATRYVTLHPGSPDAAYAQYLI 144

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             S    I D+  DQ  T+  +  +  ++ +Y  S Y   A+  +   R+QLA KE++IG
Sbjct: 145 AASNYDQIPDISRDQGRTEKAIAALEEVIRKYPTSEYANSAKQKLEGARDQLAGKEMDIG 204

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           RYY+ + +Y AAI RF+ V+  Y    H EEA+ARL EAY+A+ ++ EA+   +++   +
Sbjct: 205 RYYMSKRDYAAAINRFKTVVTRYQTTRHVEEALARLTEAYMAIGIVGEAQTAAAVLGHNF 264

Query: 258 PQGYWARYVETLVK 271
           P   W +    LVK
Sbjct: 265 PDSRWYKDAYNLVK 278


>gi|167647062|ref|YP_001684725.1| outer membrane assembly lipoprotein YfiO [Caulobacter sp. K31]
 gi|167349492|gb|ABZ72227.1| outer membrane assembly lipoprotein YfiO [Caulobacter sp. K31]
          Length = 306

 Score =  144 bits (364), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 73/203 (35%), Positives = 118/203 (58%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y      L   ++++A +YF +  R  P++  +R+S+LM+ +  Y   +Y +A S  + 
Sbjct: 45  LYSTGANRLDRGSWNEAVDYFREVERQHPYSEWSRRSILMTGYAHYMGNQYNEAISDSDR 104

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           +I  YP + +  Y YYL  + Y + I DV  DQ AT+  L  +  +V+RY NS Y + AR
Sbjct: 105 FIGLYPGNPSASYAYYLKAVCYFEQIVDVNRDQAATEQALAALRDVVQRYPNSEYAQDAR 164

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             + +  +QLA KE+ IGRYYLK G+ +AAI RF+ V+  +    H  EA+ RLVE+Y+ 
Sbjct: 165 LKIDMVNDQLAGKEMTIGRYYLKNGQTLAAIGRFRTVIDRHQTTSHTPEALYRLVESYMT 224

Query: 240 LALMDEAREVVSLIQERYPQGYW 262
           L L+DEA+   +++   +P   W
Sbjct: 225 LGLLDEAKRNGAVLGYNFPGDPW 247


>gi|182677692|ref|YP_001831838.1| DNA uptake lipoprotein-like protein [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|182633575|gb|ACB94349.1| DNA uptake lipoprotein-like protein [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 391

 Score =  144 bits (364), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 80/252 (31%), Positives = 136/252 (53%), Gaps = 13/252 (5%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDS-----------VTDVRYQREVYEKAVLFLKE 70
           F L++   +A C  +G +  +S+ +   +           + DV    ++Y + ++ L++
Sbjct: 22  FLLSVSLPLAACSSMG-DFDASKSLNPTNWFKGEKYEAKVIPDVPAD-DIYNQGLVRLQK 79

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           +++  A + F    + +P++   +K LLMSA+ QY  G Y  A +  + Y T YP + + 
Sbjct: 80  KDYEAAGKKFADLEKQYPYSQWQKKGLLMSAYSQYQNGSYDDAIASAQRYYTLYPNAPDT 139

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
            Y YYL  MS    I DV  DQ   +       +I E++  S Y + A++ + V R+QLA
Sbjct: 140 PYAYYLAAMSNYNQIPDVSRDQERAQKAAVLFQQIAEKFPKSEYGEDAKYKLQVCRDQLA 199

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
            KE+ +GRYYL    Y+AA+ RF+ VLA Y    H+EEA+ RL EAY+AL +++EA+   
Sbjct: 200 GKEMFVGRYYLNNHNYIAAVNRFREVLAKYQTTRHSEEALMRLTEAYLALGIVNEAQTAA 259

Query: 251 SLIQERYPQGYW 262
           +++   +P   W
Sbjct: 260 AVLGHNFPDSQW 271


>gi|163760778|ref|ZP_02167858.1| hypothetical protein HPDFL43_13018 [Hoeflea phototrophica DFL-43]
 gi|162282100|gb|EDQ32391.1| hypothetical protein HPDFL43_13018 [Hoeflea phototrophica DFL-43]
          Length = 288

 Score =  144 bits (364), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 120/203 (59%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y + +  ++    ++A   F    +  P++  ARK+++MSAF  Y  G+Y +A +    
Sbjct: 53  LYNQGLANIQAGQLTEASRKFQAVDKQHPYSEYARKAMVMSAFTNYRQGQYSEAINTASR 112

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           Y++ YP  ++  Y  Y+VG+SY + I +V  DQR +   +   + ++ER+  S YV+ ++
Sbjct: 113 YLSLYPNDEDAAYAQYIVGLSYYRQIPEVTRDQRTSARAIAAFTEVIERFPESEYVEDSQ 172

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             +   R+QLA KE+++GRYYL+R E+VAA  RF+LV+  Y +    EEA+ARLVE Y A
Sbjct: 173 AKLRYARDQLAGKEMQVGRYYLERKEFVAAANRFRLVVERYPNTRQIEEALARLVETYYA 232

Query: 240 LALMDEAREVVSLIQERYPQGYW 262
           + L  EA+   +++   +P   W
Sbjct: 233 MGLESEAQTAAAVLGHNFPDSQW 255


>gi|92116844|ref|YP_576573.1| putative lipoprotein [Nitrobacter hamburgensis X14]
 gi|91799738|gb|ABE62113.1| putative lipoprotein [Nitrobacter hamburgensis X14]
          Length = 325

 Score =  144 bits (363), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 131/259 (50%), Gaps = 12/259 (4%)

Query: 21  KFALTIFFSIAVCFLVG------WERQSSRD--VYLDSVTDVRYQREVYEKAVLFLKEQN 72
           K  L +   I    L G      W++  ++D   + D   D  Y   ++    L   +++
Sbjct: 47  KLRLVVGLVILGTTLSGCGTGALWDKFLAKDEQTFSDEPADKLYNEGLF----LMNNQRD 102

Query: 73  FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
              A + F++  R+ P++  ARKSLLMSA+  Y AG Y         Y+T +P S +  Y
Sbjct: 103 LKAATKKFDEVDREHPYSEWARKSLLMSAYASYQAGDYDTCIGSASRYVTLHPGSPDAAY 162

Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
             YL+  S    I D+  DQ  T+  +  +  ++ +Y  S Y   A+  +   R+QLA K
Sbjct: 163 AQYLIAASNYDQIPDISRDQARTEKAMASLEEVIRKYPTSEYAGEAKKKLQGARDQLAGK 222

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           E+ IGRYY++R +Y  AI RF+ V+  Y    H EEA+ARL EAY+A+ ++ EA+   ++
Sbjct: 223 EMAIGRYYMERRDYTGAINRFKTVVTRYQTTRHVEEALARLTEAYMAIGIVGEAQTAAAV 282

Query: 253 IQERYPQGYWARYVETLVK 271
           +   +P   W +    LVK
Sbjct: 283 LGHNFPNSRWYKDAYNLVK 301


>gi|39936582|ref|NP_948858.1| putative lipoprotein [Rhodopseudomonas palustris CGA009]
 gi|39650438|emb|CAE28961.1| Protein of unknown function UPF0169 [Rhodopseudomonas palustris
           CGA009]
          Length = 302

 Score =  144 bits (363), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 131/254 (51%), Gaps = 12/254 (4%)

Query: 26  IFFSIAVCFLVG-------WER-QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           +F  +A+   +G       W++  +  D  +D   D  Y   +Y    L  ++++   A 
Sbjct: 29  VFSLLALSLPLGGCGTGALWDKFLAKDDKMVDEPADKLYNEGLY----LMNQDKDTKGAA 84

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           + F +  R  P++  ARKSLLMSA+  Y AG Y         Y+T +P S +  Y  YL+
Sbjct: 85  KKFEEVDRQHPYSDWARKSLLMSAYAYYQAGDYDSCIGSATRYVTLHPGSPDAAYAQYLI 144

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             S    I D+  DQ  T+  +  +  ++ +Y  S Y   A+  +   R+QLA KE++IG
Sbjct: 145 AASNYDQIPDISRDQGRTEKAIAALEEVIRKYPTSEYANSAKQKLEGARDQLAGKEMDIG 204

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           RYY+ + +Y AAI RF+ V+  Y    H EEA+ARL EAY+A+ ++ EA+   +++   +
Sbjct: 205 RYYMSKRDYAAAINRFKTVVTRYQTTRHVEEALARLTEAYMAIGIVGEAQTAAAVLGHNF 264

Query: 258 PQGYWARYVETLVK 271
           P   W +    LVK
Sbjct: 265 PDSRWYKDAYNLVK 278


>gi|218531128|ref|YP_002421944.1| outer membrane assembly lipoprotein YfiO [Methylobacterium
           chloromethanicum CM4]
 gi|254562116|ref|YP_003069211.1| lipoprotein UPF0169; exported protein [Methylobacterium extorquens
           DM4]
 gi|218523431|gb|ACK84016.1| outer membrane assembly lipoprotein YfiO [Methylobacterium
           chloromethanicum CM4]
 gi|254269394|emb|CAX25360.1| putative lipoprotein UPF0169; putative exported protein
           [Methylobacterium extorquens DM4]
          Length = 291

 Score =  144 bits (363), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 70/204 (34%), Positives = 123/204 (60%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y + +  ++++++  A + F+Q  + + ++  +RK LLM+A+  Y   KY  A +  +
Sbjct: 50  KLYSEGLAKMEDRDYENAAKQFDQLDKQYTYSDWSRKGLLMTAYANYEGAKYDDAINASK 109

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            Y+ ++P SK+  Y  YL+ MS  + I DV  DQ  ++  L  +  +V++Y  S Y   A
Sbjct: 110 RYLQRHPASKDAAYAQYLMAMSQYKQIPDVTRDQERSERALIALQELVQKYPTSEYAADA 169

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
           +  + + R+QLA KE+E+GR+YL++  + AAI RF+ V++ Y    HAEEA+ RLVEAY+
Sbjct: 170 KAKIQITRDQLAGKEMEVGRFYLEKRAFPAAINRFRDVVSKYQTTRHAEEALERLVEAYM 229

Query: 239 ALALMDEAREVVSLIQERYPQGYW 262
           AL L  EA+   +++   +P   W
Sbjct: 230 ALGLTGEAQTAAAVLGHNFPDSPW 253


>gi|163852368|ref|YP_001640411.1| putative lipoprotein [Methylobacterium extorquens PA1]
 gi|163663973|gb|ABY31340.1| putative lipoprotein [Methylobacterium extorquens PA1]
          Length = 291

 Score =  144 bits (363), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 70/204 (34%), Positives = 123/204 (60%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y + +  ++++++  A + F+Q  + + ++  +RK LLM+A+  Y   KY  A +  +
Sbjct: 50  KLYSEGLAKMEDRDYENAAKQFDQLDKQYTYSDWSRKGLLMTAYANYEGAKYDDAINASK 109

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            Y+ ++P SK+  Y  YL+ MS  + I DV  DQ  ++  L  +  +V++Y  S Y   A
Sbjct: 110 RYLQRHPASKDAAYAQYLMAMSQYKQIPDVTRDQERSERALIALQELVQKYPTSEYAADA 169

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
           +  + + R+QLA KE+E+GR+YL++  + AAI RF+ V++ Y    HAEEA+ RLVEAY+
Sbjct: 170 KAKIQITRDQLAGKEMEVGRFYLEKRAFPAAINRFRDVVSKYQTTRHAEEALERLVEAYM 229

Query: 239 ALALMDEAREVVSLIQERYPQGYW 262
           AL L  EA+   +++   +P   W
Sbjct: 230 ALGLTGEAQTAAAVLGHNFPDSPW 253


>gi|240139704|ref|YP_002964181.1| putative lipoprotein UPF0169; putative exported protein
           [Methylobacterium extorquens AM1]
 gi|240009678|gb|ACS40904.1| putative lipoprotein UPF0169; putative exported protein
           [Methylobacterium extorquens AM1]
          Length = 291

 Score =  144 bits (362), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 70/204 (34%), Positives = 123/204 (60%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y + +  ++++++  A + F+Q  + + ++  +RK LLM+A+  Y   KY  A +  +
Sbjct: 50  KLYSEGLAKMEDRDYENAAKQFDQLDKQYTYSDWSRKGLLMAAYANYEGAKYDDAINASK 109

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            Y+ ++P SK+  Y  YL+ MS  + I DV  DQ  ++  L  +  +V++Y  S Y   A
Sbjct: 110 RYLQRHPASKDAAYAQYLMAMSQYKQIPDVTRDQERSERALIALQELVQKYPTSEYAADA 169

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
           +  + + R+QLA KE+E+GR+YL++  + AAI RF+ V++ Y    HAEEA+ RLVEAY+
Sbjct: 170 KAKIQITRDQLAGKEMEVGRFYLEKRAFPAAINRFRDVVSKYQTTRHAEEALERLVEAYM 229

Query: 239 ALALMDEAREVVSLIQERYPQGYW 262
           AL L  EA+   +++   +P   W
Sbjct: 230 ALGLTGEAQTAAAVLGHNFPDSPW 253


>gi|319405998|emb|CBI79629.1| competence lipoprotein precursor [Bartonella sp. AR 15-3]
          Length = 297

 Score =  143 bits (361), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 134/251 (53%), Gaps = 6/251 (2%)

Query: 26  IFFSI---AVCFLVGWERQSSRDVYLDSVTDVRYQRE--VYEKAVLFLKEQNFSKAYEYF 80
           +F  I    VCFL G   +  +++   SV  ++      +Y +A+  L     S+A + F
Sbjct: 22  VFIGILLGGVCFLAGCLGKG-KNILDPSVHVLKIDPPDVLYNQALANLDVGRLSEAAKKF 80

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
               + + +    RKSL+M AF  Y   KY  A S+ + YI+ YP + +  Y YY++G+S
Sbjct: 81  AVIEKQYAYTEWGRKSLIMGAFTNYRLAKYDDAISMAQHYISLYPLADDSAYAYYIIGLS 140

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
             + I DV  DQ+ TK  +  M  ++ERY  S YV  A+  +  GR QLA KE++IGRYY
Sbjct: 141 SFRRIPDVTRDQQDTKRAIAAMQILIERYPQSEYVSDAKAKIRFGREQLAGKEMQIGRYY 200

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            +  +Y+AA  RF+ V+  Y D    EEA+ RL E   AL L  EA+   +++   YP+ 
Sbjct: 201 EEGRQYLAASKRFRTVIEEYPDTNQIEEALFRLTEVNFALGLTMEAQTAAAILGRNYPES 260

Query: 261 YWARYVETLVK 271
            W ++   L++
Sbjct: 261 KWYKFSYDLLQ 271


>gi|220927172|ref|YP_002502474.1| outer membrane assembly lipoprotein YfiO [Methylobacterium nodulans
           ORS 2060]
 gi|219951779|gb|ACL62171.1| outer membrane assembly lipoprotein YfiO [Methylobacterium nodulans
           ORS 2060]
          Length = 299

 Score =  143 bits (361), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 127/216 (58%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
           Y   +   R   ++Y + +  L++ ++ +A + F    +++ ++  +RK++LM+A+  Y 
Sbjct: 44  YKPEIIQRRPADKIYSEGLAKLEDHDYDEAVKRFENLDKEYAYSDWSRKAVLMTAYSNYE 103

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
             KY+ A +  + Y+ ++P SK+  Y  Y++ MS+ + I DV  DQ  ++  L  +  +V
Sbjct: 104 GQKYEDAITAAKRYLQRHPGSKDAAYAQYILAMSHYKQIPDVTRDQERSERALAALQELV 163

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
           ++Y  S Y   A+  + + R+QLA KE+ IGRYYL+R  + AAI RF+ V++ Y    HA
Sbjct: 164 QKYPTSEYAADAKAKIQITRDQLAGKEMAIGRYYLERRNFPAAINRFRDVVSRYQTTRHA 223

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           EEA+ RL EAY+AL ++ EA+   +++   +P   W
Sbjct: 224 EEALERLAEAYMALGIVGEAQTAAAVLGHNFPDSPW 259


>gi|27381705|ref|NP_773234.1| hypothetical protein bll6594 [Bradyrhizobium japonicum USDA 110]
 gi|27354874|dbj|BAC51859.1| bll6594 [Bradyrhizobium japonicum USDA 110]
          Length = 296

 Score =  142 bits (359), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 131/250 (52%), Gaps = 6/250 (2%)

Query: 24  LTIFFSIAVCFLVG-WERQSSRD-VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
           + +   +A C     W++ +++D  +++   D  Y   +Y    L  ++++   A + F 
Sbjct: 27  IMLALPLAGCGTGALWDKFTAKDDTFVEEPADKIYNEGLY----LMNEKKDMKAANKKFE 82

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
           +  R  P++  ARKSLLMSA+  Y  G Y         Y+T +P S +  Y  YL+  S+
Sbjct: 83  EVDRQHPYSDWARKSLLMSAYASYQGGDYDGCIGAATRYVTLHPGSPDAAYAQYLIAASH 142

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
              I D+  DQ  T+  +  +  ++ +Y  S Y   A+  +   R+QLA KE+ +GRYY+
Sbjct: 143 YDQIPDISRDQSRTEKAIASLEEVIRKYPTSEYATSAKAKIEGARDQLAGKEMNVGRYYM 202

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           ++ +Y AAI R++ V+  Y    H EEA+ RL EAY+A+ ++ EA+   +++   +P   
Sbjct: 203 QKRDYTAAINRYKAVVTQYQTTRHVEEALYRLTEAYMAIGIVGEAQTAAAVLGHNFPDSR 262

Query: 262 WARYVETLVK 271
           W +    LVK
Sbjct: 263 WYKDAYNLVK 272


>gi|209963938|ref|YP_002296853.1| tetratricopeptide repeat family protein [Rhodospirillum centenum
           SW]
 gi|209957404|gb|ACI98040.1| tetratricopeptide repeat family protein [Rhodospirillum centenum
           SW]
          Length = 274

 Score =  142 bits (359), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 121/212 (57%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L  +N+ KA   F++  R  P++  A ++ LM+A+  Y A +Y  A +  +
Sbjct: 43  QIYTEAANALDNENYLKAAALFDEVERQHPYSQWAVRAQLMAAYAHYEALRYDDAITTLD 102

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            +I+ +P ++N  Y YYL  + Y + I DV  DQ  T+  L  +  +  R+  + Y + A
Sbjct: 103 RFISLHPGNRNAAYAYYLKALCYYEQISDVRRDQSMTESALTALQDVARRFPATTYARDA 162

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
              + + R+ LA K++E+GRYYL  G+Y+AAI RF+ V+  Y    H  EA+ RL EAY+
Sbjct: 163 NLKLDLTRDHLAGKDMEVGRYYLVTGQYMAAIKRFRRVVDKYQTTSHVPEALHRLTEAYL 222

Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLV 270
           AL ++DEA+   +L+   YP   W +   TL+
Sbjct: 223 ALGIVDEAQASAALLGHNYPGSDWYQRTYTLM 254


>gi|144897937|emb|CAM74801.1| competence lipoprotein ComL [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 271

 Score =  142 bits (359), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 70/204 (34%), Positives = 121/204 (59%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y +A+  +++  + KA   F++  R  P++  A K+ LM+A+V Y   KY  A    +
Sbjct: 39  ELYNEAMDLVEKGEYYKAALAFDEVDRQHPYSVWATKAQLMNAYVLYERNKYPDALVALD 98

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            +I  +P +K+  Y YYL G+ Y + + DV  DQ+ T++ L+ +  +V+RY  S Y + A
Sbjct: 99  RFIQLHPGNKDAPYAYYLKGLCYYEQVTDVARDQKMTEMALKSLQEVVDRYPASSYARDA 158

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
           +  V + R+ LA KE+ I RYY KR +++AA+ R+++V+  Y    H  EA+ R+VE Y+
Sbjct: 159 KLKVDLTRDHLAGKEMNIARYYQKRDQWLAALNRYKIVVEQYQTTSHVPEALHRMVEIYL 218

Query: 239 ALALMDEAREVVSLIQERYPQGYW 262
            L L +EA++  ++I   +P   W
Sbjct: 219 TLGLTEEAKKTAAVIGHNFPGSDW 242


>gi|170748766|ref|YP_001755026.1| putative lipoprotein [Methylobacterium radiotolerans JCM 2831]
 gi|170655288|gb|ACB24343.1| putative lipoprotein [Methylobacterium radiotolerans JCM 2831]
          Length = 293

 Score =  142 bits (359), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 75/220 (34%), Positives = 126/220 (57%), Gaps = 1/220 (0%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
           V DV   + +Y   +  L++ ++  A + F+   + + ++  +RK+LLM+A+  Y   KY
Sbjct: 45  VPDVPADK-LYSDGLAKLEDSDYEGAVKKFDNLDKQYQYSEWSRKALLMTAYANYEGQKY 103

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A S  + Y+ ++P SK+  Y  YL+ MS  + I DV  DQ  ++  L  +  +V++Y 
Sbjct: 104 DDAISASKRYLQRHPASKDAAYAQYLMAMSNYKQIPDVTRDQERSEKALVALQELVQKYP 163

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            S Y   A+  + + R+QLA KE+EIGR+YL++  + AAI RF+ V+A Y    HAEEA+
Sbjct: 164 TSEYAADAKAKIQITRDQLAGKEMEIGRFYLEKRNFPAAINRFRDVVAKYQTTRHAEEAL 223

Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
            RL EAY AL +  EA+   +++   +P+  W +    L+
Sbjct: 224 ERLTEAYWALGITQEAQNAAAVLGHNFPESPWYKDAHALL 263


>gi|75675253|ref|YP_317674.1| putative lipoprotein [Nitrobacter winogradskyi Nb-255]
 gi|74420123|gb|ABA04322.1| putative lipoprotein [Nitrobacter winogradskyi Nb-255]
          Length = 298

 Score =  142 bits (358), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 117/207 (56%), Gaps = 2/207 (0%)

Query: 66  LFL--KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           LFL  K+++     + F++  R+ P++  ARKSLLMSA+  Y AG Y         Y+T 
Sbjct: 67  LFLMNKQRDLKAVTKKFDEVDREHPYSEWARKSLLMSAYASYQAGDYDTCIGSASRYVTL 126

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
           +P S +  Y  YL+ +S    I DV  DQ  T+  ++ +  ++ +Y  S Y   A+  + 
Sbjct: 127 HPGSPDAAYAQYLIAVSNYDQIADVSRDQARTEKAMRTLEEVIRKYPTSEYAGEAKKKLQ 186

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
             R+QLA KE+ +GRYY++R +Y  AI RF+ V+  +    H EEA+ARL EAY+A+ ++
Sbjct: 187 GARDQLAGKEMAVGRYYMERRDYTGAINRFKTVVTRFQTTRHVEEALARLTEAYMAIGIV 246

Query: 244 DEAREVVSLIQERYPQGYWARYVETLV 270
            EA+   +++   +P  +W +    LV
Sbjct: 247 AEAQTAAAVLGHNFPDSHWYKDAYNLV 273


>gi|85714984|ref|ZP_01045969.1| putative lipoprotein [Nitrobacter sp. Nb-311A]
 gi|85698181|gb|EAQ36053.1| putative lipoprotein [Nitrobacter sp. Nb-311A]
          Length = 298

 Score =  142 bits (357), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 130/246 (52%), Gaps = 7/246 (2%)

Query: 28  FSIAVCFLVGW-ERQSSRD--VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
           F++A C      ++ +++D   + D   D  Y   ++    L  KE +   A + F++  
Sbjct: 32  FTVAGCGTGPLLDKFTAKDEQTFSDEPADKLYNEGLF----LMNKEHDLKAATKKFDEVD 87

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
           R+ P++  ARKSLLMSA+  Y AG Y         Y+T +P + +  Y  YL+ +S    
Sbjct: 88  REHPYSEWARKSLLMSAYASYQAGDYDTCIGSASRYVTLHPGTPDAAYAQYLIAVSNYDQ 147

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
           I DV  DQ  T+  +  +  ++ +Y  S Y   A+  +   R+QLA KE+ IGRYY++R 
Sbjct: 148 IPDVSRDQARTEKAMHALEEVIRKYPTSEYAGEAKKKLQGARDQLAGKEMAIGRYYMERR 207

Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
           +Y  AI R++ V+  +    H EEA+ARL EAY+A+ ++ EA+   +++   +P   W +
Sbjct: 208 DYTGAINRYKTVVTRFQTTRHVEEALARLTEAYMAIGIVAEAQTAAAVLGHNFPDSRWYK 267

Query: 265 YVETLV 270
               LV
Sbjct: 268 DAYNLV 273


>gi|307944886|ref|ZP_07660223.1| lipoprotein [Roseibium sp. TrichSKD4]
 gi|307771810|gb|EFO31034.1| lipoprotein [Roseibium sp. TrichSKD4]
          Length = 288

 Score =  142 bits (357), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 128/241 (53%), Gaps = 8/241 (3%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
            ALTI   +A C        S++D   D   D      +Y + +    +     A   F 
Sbjct: 23  MALTIPLGLAAC-------SSTKDTE-DFALDDTPPEVLYNEGLALRAQGKLKDADAKFQ 74

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
           Q  + +P++  A+KSL+  A++ YS GKY +A +  + ++T YP + +  Y  Y++G SY
Sbjct: 75  QLDKLYPYSEYAKKSLVNMAYINYSRGKYPEAINAAQRFVTLYPGNDDSAYALYIIGQSY 134

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            + + D+  DQ  T+      S +++RY +S Y   A   +   ++QLA KE+++GRYYL
Sbjct: 135 FKQMPDISRDQAVTRKAASAYSELLQRYPDSEYSPDAETKLIAVKDQLAGKEMQVGRYYL 194

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           K+  Y+A I RF+ V+  Y    H EEA+ RL EAY AL +++EA+   +++   +P   
Sbjct: 195 KKRNYIAGINRFKTVVLQYQTTRHVEEALFRLTEAYFALGVVNEAQTAAAVLGHNFPDTQ 254

Query: 262 W 262
           W
Sbjct: 255 W 255


>gi|296532811|ref|ZP_06895488.1| lipoprotein [Roseomonas cervicalis ATCC 49957]
 gi|296266872|gb|EFH12820.1| lipoprotein [Roseomonas cervicalis ATCC 49957]
          Length = 281

 Score =  142 bits (357), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 5/243 (2%)

Query: 24  LTIFFSIAVCFLVG----WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           L +   +A   LVG    W+ + S      SV D +    +Y   +  L+++ + +A E 
Sbjct: 9   LRLSLILAAPLLVGACSAWDGKDSSLRPRASVAD-QSPEALYAAGIEALRQERYQQAVEM 67

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
           F+    + P++  A  + LMSA+ +Y   +Y +A    + +I  +P  +++ Y YYL  +
Sbjct: 68  FDAVESNHPYSTWATSAKLMSAYSEYMRNRYTEAIGALDRFIQLHPAHRDIAYAYYLRAL 127

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
            Y + I D   DQR T+  L  +  +V R+ +S Y + AR  + + R+ LA +E+ +GR+
Sbjct: 128 CYYEQIVDAERDQRGTETALAQLQDVVNRFPDSAYARDARLKMDLARDHLAGREMIVGRF 187

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           Y  RG Y AAI RF+ V+ +Y    H  EA+ RL E Y+AL L +EAR+  S++   YP 
Sbjct: 188 YQARGLYTAAIGRFKRVVEDYQTTNHVPEALHRLTEVYLALGLTEEARQTASVLGHNYPG 247

Query: 260 GYW 262
             W
Sbjct: 248 SPW 250


>gi|83592277|ref|YP_426029.1| competence lipoprotein ComL [Rhodospirillum rubrum ATCC 11170]
 gi|83575191|gb|ABC21742.1| competence lipoprotein ComL, putative [Rhodospirillum rubrum ATCC
           11170]
          Length = 292

 Score =  141 bits (355), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 118/204 (57%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y +AV  L   +++ A + F++  R  P++  A K+ +MSA+  Y    Y  A     
Sbjct: 53  ELYNEAVDLLNTSSYALAAKAFDEVERQHPYSSWATKAQIMSAYALYENEAYDDAVVAIN 112

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            +I  +P ++++ Y YYL G+ Y + I DV  DQ+ T+  +  +  +V R+ +SPY + A
Sbjct: 113 RFIELHPGNRDIAYAYYLRGLCYYEQISDVRRDQQITRQAMSNLRDVVTRFPDSPYARDA 172

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
           R  + + R+ +A KE+ +GR+YLKR +++AA+ RF++V+  Y    H  EA+ R+VE   
Sbjct: 173 RLKIDLARDHIAGKEMSVGRFYLKRQDFLAALNRFRVVVEQYDQTTHVPEALYRMVEINT 232

Query: 239 ALALMDEAREVVSLIQERYPQGYW 262
            L L DEA+ V +++   +P   W
Sbjct: 233 LLGLPDEAKRVAAVLGHNFPGSDW 256


>gi|188582377|ref|YP_001925822.1| lipoprotein [Methylobacterium populi BJ001]
 gi|179345875|gb|ACB81287.1| putative lipoprotein [Methylobacterium populi BJ001]
          Length = 291

 Score =  140 bits (354), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 121/204 (59%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y + +  ++++++  A + F Q  + + ++  +RK LLM+A+  Y   KY  A +  +
Sbjct: 50  KLYSEGLAKMEDKDYENAAKQFEQLDKQYTYSDWSRKGLLMTAYANYEGAKYDDAINASK 109

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            Y+ ++P SK+  Y  YL+ MS  + I DV  DQ  ++  L  +  +V++Y  S Y   A
Sbjct: 110 RYLQRHPASKDAAYAQYLMAMSQYKQIPDVTRDQERSERALVALQELVQKYPTSEYAADA 169

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
           +  + + R+QLA KE+ +GR+YL++  + AAI RF+ V++ Y    HAEEA+ RLVEAY+
Sbjct: 170 KAKIQITRDQLAGKEMAVGRFYLEKRAFPAAINRFRDVVSKYQTTRHAEEALERLVEAYM 229

Query: 239 ALALMDEAREVVSLIQERYPQGYW 262
           AL L  EA+   +++   +P   W
Sbjct: 230 ALGLTAEAQTAAAVLGHNFPDSPW 253


>gi|319404502|emb|CBI78107.1| competence lipoprotein precursor [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 297

 Score =  140 bits (353), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 126/244 (51%), Gaps = 5/244 (2%)

Query: 31  AVCFLVGWERQSSRDVYLDS---VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
             CFL G   +      LD    V  +     +Y +A+  L     S+A + F    + +
Sbjct: 30  GTCFLAGCLGKGKN--ILDPSMHVLKIDPPDVLYNQALANLDVGRLSEAAKKFAIIEKQY 87

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
            +    RKSL+M AF  Y   KY  A S+ + YI+ YP + +  Y YY++G+S  + I D
Sbjct: 88  AYTDWGRKSLIMGAFTNYRLAKYDDAISMAQHYISLYPLADDSAYAYYIIGLSSFRRIPD 147

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
           V  DQ+ TK  +  M  ++ERY  S YV  A+  +  GR QLA KE++IGRYY +   Y+
Sbjct: 148 VTRDQQDTKRAIAAMQVLIERYPESEYVSDAKAKIRFGREQLAGKEMQIGRYYEEGQRYL 207

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
           AA  RF+ V+  Y D    EEA+ RL E   AL L  EA+   +++   YP+  W ++  
Sbjct: 208 AASRRFRTVIEEYPDTNQIEEALFRLTEVNFALGLTMEAQTAAAILGRNYPESKWYKFSY 267

Query: 268 TLVK 271
            L++
Sbjct: 268 DLLQ 271


>gi|319899149|ref|YP_004159242.1| competence lipoprotein precursor [Bartonella clarridgeiae 73]
 gi|319403113|emb|CBI76671.1| competence lipoprotein precursor [Bartonella clarridgeiae 73]
          Length = 306

 Score =  140 bits (353), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/253 (33%), Positives = 133/253 (52%), Gaps = 4/253 (1%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE--VYEKAVLFLKEQNFSKAYE 78
           K  + IF     C L G   +  ++V   SV  ++      +Y +A+  L     ++A +
Sbjct: 30  KVLIGIFLG-GTCCLAGCLGKG-KNVLDPSVHVLKIDPPDVLYNQALANLDAGRLNEAAK 87

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            F    + + +    RK+L+M AF  Y   KY  A S+ + YI+ YP + +  Y YY++G
Sbjct: 88  KFAIIEKQYAYTEWGRKALVMGAFTNYRLAKYDDAISMAQHYISLYPLADDSAYAYYIIG 147

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           +S  + I DV  DQR TK  +  M  ++ERY  S YV  A+  +  GR QLA KE++IGR
Sbjct: 148 LSSFRRIPDVTRDQRDTKRAIAAMQLLIERYPQSEYVSDAKAKIRFGREQLAGKEMQIGR 207

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           YY +  +Y+AA  RF+ V+  YSD    EEA+ RL E   AL L  EA+   +++   YP
Sbjct: 208 YYEEGQQYLAASRRFRTVIEEYSDTNQIEEALFRLTEVNFALGLTMEAQTAAAILGRNYP 267

Query: 259 QGYWARYVETLVK 271
              W ++   L++
Sbjct: 268 GSKWYKFSYDLLQ 280


>gi|304321637|ref|YP_003855280.1| competence lipoprotein ComL [Parvularcula bermudensis HTCC2503]
 gi|303300539|gb|ADM10138.1| competence lipoprotein ComL, putative [Parvularcula bermudensis
           HTCC2503]
          Length = 308

 Score =  140 bits (352), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 131/248 (52%), Gaps = 10/248 (4%)

Query: 21  KFALT----IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
           K ALT    +  ++  C   G      R  Y++   ++     +Y KA   L+ + + +A
Sbjct: 4   KIALTALGSVLLALGGCSNFG-NAPDDRLAYVEEPVEI-----LYRKAADALERRRYEEA 57

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
              F +  R  P++  AR+++LM A+ +Y    Y  + +  + ++  +P +K+  Y YYL
Sbjct: 58  VLLFEEVERQHPYSSWARRAMLMVAYSEYLQNNYDASIASIDRFLAVHPGNKDAAYAYYL 117

Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
             ++Y + IRDV  DQ  T   L  +  ++ RY +S Y + A   + + R+ LA KE++I
Sbjct: 118 RAINYYERIRDVGRDQDITAQALSALEDVIRRYPDSDYARDASLKLDLTRDHLAGKEMDI 177

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           GR+YLKR E++AAI RF  VL  Y    H  EA+ RLVEAY+ + +  EA+   +++   
Sbjct: 178 GRWYLKRNEHIAAINRFNEVLTTYETTSHVPEALHRLVEAYLEMGVAFEAQRHAAILAHN 237

Query: 257 YPQGYWAR 264
           YP   W R
Sbjct: 238 YPDSNWYR 245


>gi|159044955|ref|YP_001533749.1| hypothetical protein Dshi_2414 [Dinoroseobacter shibae DFL 12]
 gi|157912715|gb|ABV94148.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12]
          Length = 279

 Score =  139 bits (350), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 81/235 (34%), Positives = 124/235 (52%), Gaps = 5/235 (2%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
             +AV       +Q       +S  DV + R  +E     L+  N  +A  YF +  R +
Sbjct: 14  LGLAVILAACGSQQPEFPALEESPPDVIFNRAEFE-----LQANNLDEAARYFGEVERLY 68

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
           PF+  A+++L+M AF  +   +Y+ + +  + Y+  YP  ++  Y  YL+ +SY   I D
Sbjct: 69  PFSEFAKRALIMQAFTYHRNREYESSRAAAQRYLDFYPADEDAAYAQYLLALSYYDQIDD 128

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
           V  DQ  T   LQ +  ++E Y  S Y K +     +  N LAAKE+EIGRYYLKRG Y 
Sbjct: 129 VGRDQGLTFQALQALRTVIEVYPESSYAKSSILKFDLAFNHLAAKEMEIGRYYLKRGHYA 188

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           AAI RF++V+ ++    H  EA+ RLVEAY++L L  EA+   +++   Y    W
Sbjct: 189 AAINRFRVVVEDFQTTTHTPEALHRLVEAYLSLGLEGEAQTAGAILGFNYQATDW 243


>gi|319407495|emb|CBI81143.1| competence lipoprotein precursor [Bartonella sp. 1-1C]
          Length = 306

 Score =  139 bits (349), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 83/244 (34%), Positives = 126/244 (51%), Gaps = 5/244 (2%)

Query: 31  AVCFLVGWERQSSRDVYLDS---VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
             CFL G   +      LD    V  +     +Y +A+  L     S+A + F    + +
Sbjct: 39  GTCFLAGCLGKGKN--ILDPSMHVLKIDPPDVLYNQALANLDVGRLSEAAKKFAIIEKQY 96

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
            +    RKSL+M AF  Y   KY  A ++ + YI+ YP + +  Y YY++G+S  + I D
Sbjct: 97  AYTDWGRKSLIMGAFTNYRLAKYDDAIAMAQHYISLYPLADDSAYAYYIIGLSSFRRIPD 156

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
           V  DQ+ TK  +  M  ++ERY  S YV  A+  +  GR QLA KE++IGRYY +   Y+
Sbjct: 157 VTRDQQDTKRAIAAMQVLIERYPESEYVSDAKAKIRFGREQLAGKEMQIGRYYEEGQRYL 216

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
           AA  RF+ V+  Y D    EEA+ RL E   AL L  EA+   +++   YP+  W ++  
Sbjct: 217 AASRRFRTVIEEYPDTNQIEEALFRLTEVNFALGLTMEAQTAAAILGRNYPESKWYKFSY 276

Query: 268 TLVK 271
            L++
Sbjct: 277 DLLQ 280


>gi|254292784|ref|YP_003058807.1| outer membrane assembly lipoprotein YfiO [Hirschia baltica ATCC
           49814]
 gi|254041315|gb|ACT58110.1| outer membrane assembly lipoprotein YfiO [Hirschia baltica ATCC
           49814]
          Length = 260

 Score =  138 bits (348), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 74/206 (35%), Positives = 122/206 (59%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   +  + + +A   F +  R  P++  A +++LM+A+VQY + +Y +  +   
Sbjct: 41  QLYNEAGRSVDRKQWDRAALEFQEVQRQHPYSEWAERAMLMTAYVQYKSRQYAEVEASAG 100

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           +Y   YP SK+  Y YYL+ +S+   I DV  DQ  T+L L  +  +V RY  + Y + A
Sbjct: 101 QYTALYPSSKSAAYAYYLIALSHFDQITDVGRDQGRTELALSALQDVVRRYPTTEYARDA 160

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
              + + R+QLA KE+E+GRYYLK  E++AAI RF+ V+  Y    HA EA+ RLVEAY+
Sbjct: 161 ELKIDMVRDQLAGKEMEVGRYYLKSSEFLAAINRFKRVVDEYETTTHAPEALHRLVEAYL 220

Query: 239 ALALMDEAREVVSLIQERYPQGYWAR 264
           ++ L+ +A+   +++   YP   W R
Sbjct: 221 SIGLVGQAQAAAAVLGHNYPSSRWYR 246


>gi|83312955|ref|YP_423219.1| DNA uptake lipoprotein [Magnetospirillum magneticum AMB-1]
 gi|82947796|dbj|BAE52660.1| DNA uptake lipoprotein [Magnetospirillum magneticum AMB-1]
          Length = 304

 Score =  138 bits (348), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 115/204 (56%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y +A+  +    + KA + F++  R  P++  A K+ LMSA+  Y   KY  A    +
Sbjct: 41  ELYNEAMDLVDANEYYKAAQLFDEVDRQHPYSVWATKAQLMSAYALYERNKYDDAIVALD 100

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            +I  +P +K++ Y YYL G+ Y + I DV  DQ+ T+  L+ M  +V+R+ ++PY + A
Sbjct: 101 RFIQLHPGNKSIAYGYYLKGLCYYEQITDVARDQKLTEQALKIMQEVVDRFPSTPYARDA 160

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
           R  + + R+ LA KE+ IGRYY     ++AA+ RF++V   Y    H  EA+ R+VE Y 
Sbjct: 161 RLKIDLARDHLAGKEMNIGRYYQHLEHHLAALNRFKVVAEQYQTTTHVPEALYRMVEIYT 220

Query: 239 ALALMDEAREVVSLIQERYPQGYW 262
           AL L  EA    +++   +P   W
Sbjct: 221 ALGLDQEAARAAAVLGHNFPGSDW 244


>gi|16126227|ref|NP_420791.1| competence lipoprotein ComL [Caulobacter crescentus CB15]
 gi|18202701|sp|Q9A6U9|Y1984_CAUCR RecName: Full=UPF0169 lipoprotein CC_1984; Flags: Precursor
 gi|13423451|gb|AAK23959.1| competence lipoprotein ComL, putative [Caulobacter crescentus CB15]
          Length = 305

 Score =  138 bits (347), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 69/203 (33%), Positives = 116/203 (57%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y      L   N+++A +YF +  R  P++  +R+S+LM+ +  Y   +Y +A    + 
Sbjct: 44  LYSTGADRLDRGNWNEAVDYFREVERQHPYSEWSRRSILMTGYAHYMGNQYAEAIGDADR 103

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           +I+ YP + +  Y +YL  + Y + I DV  DQ AT+  L  +  +V+RY N+ Y   AR
Sbjct: 104 FISLYPGNPSAQYAFYLKAICYFEQIVDVNRDQAATEQALAALRDVVQRYPNTEYATDAR 163

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             + +  +QLA KE+ IGR+YLK G+ +AAI RF+ V+  +    H  EA+ RLVEAY+ 
Sbjct: 164 LKIDMVNDQLAGKEMAIGRWYLKNGQTLAAIGRFKAVIERHQTTSHTPEALFRLVEAYLT 223

Query: 240 LALMDEAREVVSLIQERYPQGYW 262
           + L +EA+   +++   +P   W
Sbjct: 224 IGLNEEAKRNGAVLGYNFPGDRW 246


>gi|221235000|ref|YP_002517436.1| ComL family lipoprotein [Caulobacter crescentus NA1000]
 gi|220964172|gb|ACL95528.1| lipoprotein, ComL family [Caulobacter crescentus NA1000]
          Length = 309

 Score =  138 bits (347), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 69/203 (33%), Positives = 116/203 (57%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y      L   N+++A +YF +  R  P++  +R+S+LM+ +  Y   +Y +A    + 
Sbjct: 48  LYSTGADRLDRGNWNEAVDYFREVERQHPYSEWSRRSILMTGYAHYMGNQYAEAIGDADR 107

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           +I+ YP + +  Y +YL  + Y + I DV  DQ AT+  L  +  +V+RY N+ Y   AR
Sbjct: 108 FISLYPGNPSAQYAFYLKAICYFEQIVDVNRDQAATEQALAALRDVVQRYPNTEYATDAR 167

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             + +  +QLA KE+ IGR+YLK G+ +AAI RF+ V+  +    H  EA+ RLVEAY+ 
Sbjct: 168 LKIDMVNDQLAGKEMAIGRWYLKNGQTLAAIGRFKAVIERHQTTSHTPEALFRLVEAYLT 227

Query: 240 LALMDEAREVVSLIQERYPQGYW 262
           + L +EA+   +++   +P   W
Sbjct: 228 IGLNEEAKRNGAVLGYNFPGDRW 250


>gi|294676385|ref|YP_003577000.1| competence lipoprotein ComL [Rhodobacter capsulatus SB 1003]
 gi|294475205|gb|ADE84593.1| competence lipoprotein ComL [Rhodobacter capsulatus SB 1003]
          Length = 281

 Score =  138 bits (347), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 70/184 (38%), Positives = 112/184 (60%)

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
           ++A  YF++  R +P++  A+++L+M AF Q+ A KY+ A S  + Y+  YP S++  Y 
Sbjct: 57  AEALRYFSEVERLYPYSEYAKRALIMEAFAQHKAKKYEDARSSAQRYLDTYPGSEDAAYA 116

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
            YL+ +SY   I +V  DQ  T   LQ +  ++E Y +S Y + A     +  + LA+KE
Sbjct: 117 KYLLALSYYDQIDEVGRDQGLTFQALQALRAVIEEYPDSDYARSAALKFDLAFDHLASKE 176

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +EIGR+YLK+G Y AAI RF++V+  Y    H  EA+ RLVE Y++L L DEA+   +++
Sbjct: 177 MEIGRFYLKKGHYTAAINRFRVVVEQYQTTTHTPEALMRLVECYLSLGLTDEAQTAGAIL 236

Query: 254 QERY 257
              +
Sbjct: 237 GHNF 240


>gi|83942732|ref|ZP_00955193.1| competence lipoprotein ComL, putative [Sulfitobacter sp. EE-36]
 gi|83953972|ref|ZP_00962693.1| competence lipoprotein ComL, putative [Sulfitobacter sp. NAS-14.1]
 gi|83841917|gb|EAP81086.1| competence lipoprotein ComL, putative [Sulfitobacter sp. NAS-14.1]
 gi|83846825|gb|EAP84701.1| competence lipoprotein ComL, putative [Sulfitobacter sp. EE-36]
          Length = 290

 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 117/204 (57%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++YE+    L  +  ++A EYF++  R +P++  A+++L+M AF  +    Y  + S  +
Sbjct: 51  QIYERGEFELNRKRPAEAAEYFSEIERLYPYSEWAKRALIMQAFAYHQDQDYPNSRSAAQ 110

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            YI  +P+  +  Y  YL+ +SY   I +V  DQ  T   LQ + R++E Y +S Y + +
Sbjct: 111 RYIDFFPDDDDASYASYLLALSYYDQIDEVGRDQGLTFQALQALRRVIEDYPDSEYARSS 170

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
                +  + LA KE+E+GRYYL+R  Y A+I RF++V+ ++    H  EA+ RLVEAY+
Sbjct: 171 VLKFDLAFDHLAGKEMEVGRYYLRRKHYTASINRFRVVVEDFQTTTHTAEALHRLVEAYL 230

Query: 239 ALALMDEAREVVSLIQERYPQGYW 262
           +L L DEA+   +++   Y    W
Sbjct: 231 SLGLTDEAQTAGAILGHNYQSTEW 254


>gi|300021786|ref|YP_003754397.1| outer membrane assembly lipoprotein YfiO [Hyphomicrobium
           denitrificans ATCC 51888]
 gi|299523607|gb|ADJ22076.1| outer membrane assembly lipoprotein YfiO [Hyphomicrobium
           denitrificans ATCC 51888]
          Length = 309

 Score =  135 bits (341), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 117/204 (57%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           +++  A   +   +F  A + F    R+ P++  ARKS++M+A+  Y AGK  +A +  E
Sbjct: 68  KMFANADAKMSSGSFDDAAKQFEAVDREHPYSPEARKSIVMAAYAYYRAGKTPEAIASAE 127

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            Y+  +P +K     ++++ MSY   ++    DQ A +  L+    +  R+  S Y + A
Sbjct: 128 RYVALHPGTKEAPMAHHIIAMSYFDDLKTANRDQTAARKALEQFKILRTRFPESEYSRDA 187

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
              + +  + LAA+E+E+GRYYL +  YVAAI RF+ V+++Y    H EEA+ARLVE+Y+
Sbjct: 188 DNKIRICMDNLAAQEMEVGRYYLNQHNYVAAINRFKTVVSDYQTTAHVEEALARLVESYM 247

Query: 239 ALALMDEAREVVSLIQERYPQGYW 262
           AL ++ EA+   +++   YP   W
Sbjct: 248 ALGVVTEAQNAAAILGHNYPDSKW 271


>gi|84501764|ref|ZP_00999936.1| Putative ComL lipoprotein [Oceanicola batsensis HTCC2597]
 gi|84390385|gb|EAQ02944.1| Putative ComL lipoprotein [Oceanicola batsensis HTCC2597]
          Length = 267

 Score =  135 bits (341), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 70/204 (34%), Positives = 116/204 (56%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y++    L   ++  A EYF +  R +P++  A+++L+M AF  +    Y+++ +  +
Sbjct: 28  QIYQRGEYELDSSDYDSAAEYFGEVERLYPYSEWAKRALIMQAFSFHKDKNYEESRASAQ 87

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            +I  YP   +  Y  YL+ +SY   I +V  DQ  T   LQ +  ++ERY  S Y + A
Sbjct: 88  RFIDFYPTDDDAAYAQYLLALSYYDQIDEVGRDQGLTFQALQSLRTVIERYPESDYARSA 147

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
                +  + LAAKE+EIGRYYLKR  + AAI RF++V+ ++    H  EA+ RLVEAY+
Sbjct: 148 ILKFDLAFDHLAAKEMEIGRYYLKRDHFPAAINRFRVVVEDFQTTTHTAEALHRLVEAYL 207

Query: 239 ALALMDEAREVVSLIQERYPQGYW 262
           +L L DEA+   +++   +    W
Sbjct: 208 SLGLTDEAQTAGAILGHNFQSTEW 231


>gi|84686348|ref|ZP_01014242.1| Putative ComL lipoprotein [Maritimibacter alkaliphilus HTCC2654]
 gi|84665531|gb|EAQ12007.1| Putative ComL lipoprotein [Rhodobacterales bacterium HTCC2654]
          Length = 297

 Score =  135 bits (341), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 117/204 (57%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L+  ++ +A ++F +  R +P+  +A+++L+M AF  +  G+Y+ A +  +
Sbjct: 58  QIYARAEYDLENNDYDEAAKWFGEVERVYPYTQLAKRALIMQAFAHHKDGEYELARAAAQ 117

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            ++  YP  ++  Y  YL+ +SY   I DV  DQ  T   LQ +  ++E Y ++ Y + A
Sbjct: 118 RFVDFYPGDEDAGYATYLLALSYYDQIEDVGRDQGLTYQALQALRDVIELYPDTEYARSA 177

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
                +  + LAAKE+EIGRYYLKR  Y AA+ RF++V+  +       EA+ RLVE+YV
Sbjct: 178 ILKFDLAYDHLAAKEMEIGRYYLKRKHYAAAVNRFRVVVEQFQTTTQTPEALHRLVESYV 237

Query: 239 ALALMDEAREVVSLIQERYPQGYW 262
           +L L DEA    +++   Y    W
Sbjct: 238 SLGLSDEAETAGAILGYNYQSTEW 261


>gi|310814891|ref|YP_003962855.1| tetratricopeptide TPR_2 repeat protein [Ketogulonicigenium vulgare
           Y25]
 gi|308753626|gb|ADO41555.1| tetratricopeptide TPR_2 repeat protein [Ketogulonicigenium vulgare
           Y25]
          Length = 289

 Score =  135 bits (339), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 71/199 (35%), Positives = 111/199 (55%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           +V++     L E     A  +F +  R +P++  AR+ L+M AF  + A  Y+ + S  +
Sbjct: 50  QVFDLGEQQLNENRLDDAAFFFGEIERLYPYSSWARRGLIMQAFAYHRARDYENSRSAAQ 109

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            Y+  YP  ++  Y  YL+ +SY   I D+  DQ  T   LQ + R++E Y +S Y   A
Sbjct: 110 RYVDFYPTDEDAAYAQYLLALSYYDQIDDIGRDQGVTFRALQELRRVIELYPDSEYATAA 169

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
                +  + LA KE+E+GRYYL RG + AAI RF++V+ ++    +  EA+ RLVEAY+
Sbjct: 170 VQKFDLAFDHLAGKEMEVGRYYLSRGNFTAAISRFRVVVEDFQTTTYTPEALMRLVEAYM 229

Query: 239 ALALMDEAREVVSLIQERY 257
           AL L DEAR   +++   Y
Sbjct: 230 ALGLTDEARSAAAILGHNY 248


>gi|298293090|ref|YP_003695029.1| outer membrane assembly lipoprotein YfiO [Starkeya novella DSM 506]
 gi|296929601|gb|ADH90410.1| outer membrane assembly lipoprotein YfiO [Starkeya novella DSM 506]
          Length = 305

 Score =  134 bits (338), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 130/252 (51%), Gaps = 6/252 (2%)

Query: 21  KFALTIFFSIAVCFLVGW-ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           + A  +    ++     W +  +   VY D   + RY      + +  + +  +++A + 
Sbjct: 35  RLAGLVMLGASLGGCASWFDTSTEAKVYPDVPAEQRYN-----EGLTLMAKDEYAEAIKR 89

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
           F    R  P++  ARK++LM A++ Y+   Y ++ S    Y+  +P S +  Y  YL+  
Sbjct: 90  FEDVDRQHPYSEWARKAVLMIAYINYAQANYDESISAARRYLALHPGSADAAYAQYLIAA 149

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           SY   I D+  DQ  T+  ++ +  +V ++ N+ Y   A+  + V R+QLA KE+ IGRY
Sbjct: 150 SYFDQIPDISRDQARTERAMEALDEVVRKFPNTEYAVSAKKKLEVARDQLAGKEMMIGRY 209

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           YL +  Y  AI RF++V+  Y    H EEA+ RL EAY+AL ++ EA+   +++   +P 
Sbjct: 210 YLDQRNYAGAINRFKVVVTRYQTTRHVEEALYRLTEAYMALGVVGEAQTSAAVLGYNFPD 269

Query: 260 GYWARYVETLVK 271
             W +    LV+
Sbjct: 270 STWYKDAYKLVQ 281


>gi|87199749|ref|YP_497006.1| DNA uptake lipoprotein [Novosphingobium aromaticivorans DSM 12444]
 gi|87135430|gb|ABD26172.1| DNA uptake lipoprotein [Novosphingobium aromaticivorans DSM 12444]
          Length = 268

 Score =  134 bits (338), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 116/203 (57%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y  A   L   +  +A   F++  R  P++  AR++ LMSAF  Y A  Y ++    + 
Sbjct: 48  LYTAAKERLDRGDSKQAAALFDEVERQHPYSPWARRAQLMSAFSYYVARDYSKSVQSAQR 107

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           +++ +P +K+  Y YYL+ + Y + I DV  DQ+ T+  L  M+ +V RY N+ Y   AR
Sbjct: 108 FLSIHPGNKDAPYAYYLIALCYYEQISDVTRDQKITQQALTAMNELVRRYPNTDYAADAR 167

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             + +  + LA KE+EIGR Y + G+++A+  RF+ V+  Y    HA EA+ RLVE+Y++
Sbjct: 168 LKIDLINDHLAGKEMEIGRMYQRSGKWLASSLRFRTVVDKYQTTSHAPEALYRLVESYLS 227

Query: 240 LALMDEAREVVSLIQERYPQGYW 262
           L L  EA++  +++   YP   W
Sbjct: 228 LGLPVEAQKAAAVLGSNYPGSKW 250


>gi|149184730|ref|ZP_01863048.1| DNA uptake lipoprotein [Erythrobacter sp. SD-21]
 gi|148832050|gb|EDL50483.1| DNA uptake lipoprotein [Erythrobacter sp. SD-21]
          Length = 266

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 68/183 (37%), Positives = 107/183 (58%)

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
           F++  R  P++  AR++ LMSAF  Y AG Y +  S  + +++ +P +K+  Y YYL+ +
Sbjct: 66  FDEVERQHPYSPWARRAQLMSAFSYYVAGDYNKTTSSAQRFLSIHPGNKDAPYAYYLIAL 125

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           SY + I DV  DQ+ T+  L  +  +  R+  S Y   AR  + +  + LA KE+EIGRY
Sbjct: 126 SYYEQISDVQRDQKVTEQALTALREVNRRFPQSQYAADARLKIDLVEDHLAGKEMEIGRY 185

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           Y + G+++AA  RFQ V+  Y    HA EA+ RLVE+ +AL +  EA +  +++   YP 
Sbjct: 186 YQRSGKWIAAQIRFQNVVETYQTTSHAPEALYRLVESSLALGIKPEAVKYAAVLGANYPG 245

Query: 260 GYW 262
             W
Sbjct: 246 NEW 248


>gi|259418921|ref|ZP_05742838.1| tetratricopeptide TPR_2 repeat protein [Silicibacter sp. TrichCH4B]
 gi|259345143|gb|EEW56997.1| tetratricopeptide TPR_2 repeat protein [Silicibacter sp. TrichCH4B]
          Length = 283

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/204 (35%), Positives = 113/204 (55%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++YE+    L       A  YF++  R +P++  A++SL+M AF  + A  Y+ + S  +
Sbjct: 44  QIYERGEFELARNREQDAAYYFSEVERLYPYSEWAKQSLIMQAFTYHQAEDYENSRSAAQ 103

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            YI  YP  ++  Y  YL+ +SY   I +V  DQ  T   LQ +  ++E Y +S Y   A
Sbjct: 104 RYIDFYPTDEDAAYAQYLLALSYYDQIDEVGRDQGLTFQALQALRTVIEVYPDSEYASSA 163

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
                +  + LA KE+EIGRYYLKR  Y AAI RF++V+ ++    H  EA+ RL+EAY+
Sbjct: 164 ILKFDLAFDHLAGKEMEIGRYYLKRQHYTAAINRFRVVVEDFQTTSHTAEALYRLIEAYL 223

Query: 239 ALALMDEAREVVSLIQERYPQGYW 262
           +L L DEA+   +++   +    W
Sbjct: 224 SLGLTDEAQSAGAILGHNFQSTDW 247


>gi|126726631|ref|ZP_01742471.1| Putative ComL lipoprotein [Rhodobacterales bacterium HTCC2150]
 gi|126703960|gb|EBA03053.1| Putative ComL lipoprotein [Rhodobacterales bacterium HTCC2150]
          Length = 278

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 117/205 (57%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           R ++  A   L+E+   KA + F +  R +P++ +A+++L+M AF  +    Y+ +    
Sbjct: 38  RSIFTLAEQKLEEKEPEKAAKIFGEIERLYPYSDLAKRALIMQAFSYHKDKDYENSRIAA 97

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           + +I  YP  ++  Y  YL+ +SY   I +V  DQ  T   LQ +  ++ERY ++ Y K 
Sbjct: 98  QRFIDFYPADEDAAYAEYLLALSYYDQIDEVGRDQGLTFQALQGLRTVIERYPDTEYAKS 157

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           A     +  + LAAKE+EIGRYYLKR  Y +AI RF++V+ ++    H  EA+ RL+EAY
Sbjct: 158 AILKFDLAFDHLAAKEMEIGRYYLKRDHYTSAINRFRVVVEDFQTTAHTAEALYRLIEAY 217

Query: 238 VALALMDEAREVVSLIQERYPQGYW 262
           +AL L DEA+   +++   +    W
Sbjct: 218 LALGLADEAQTAGAILGHNFQSTEW 242


>gi|114798667|ref|YP_759117.1| putative competence lipoprotein ComL [Hyphomonas neptunium ATCC
           15444]
 gi|114738841|gb|ABI76966.1| putative competence lipoprotein ComL [Hyphomonas neptunium ATCC
           15444]
          Length = 277

 Score =  133 bits (334), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 116/204 (56%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +    L  +++++A  +F +  R  P++  AR++++MSA+  Y +  Y  + +  E
Sbjct: 39  QLYNQGTDRLDRRDYTRAKLFFEEVERQHPYSEWARRAMVMSAYASYRSRDYTTSITGAE 98

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            Y++ +P     +Y YYL+ +++   I DV  DQ  T+     +  ++ RY  S Y + A
Sbjct: 99  RYLSLHPGGSEAEYAYYLIALNHFDQITDVGRDQATTESARNALLEVIRRYPESEYARDA 158

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
           R  + +  +QLA KE+ +GR+YL+  + +AA+ RF+ V+ +Y    H+EEA+ RLVEAY+
Sbjct: 159 RVKLDMVNDQLAGKEMTVGRWYLRSNQTLAAVNRFRKVVTDYQTTSHSEEALHRLVEAYL 218

Query: 239 ALALMDEAREVVSLIQERYPQGYW 262
            L L D+A    + +   YP   W
Sbjct: 219 TLGLRDQAVVAGATLGHNYPGSDW 242


>gi|329848741|ref|ZP_08263769.1| hypothetical protein ABI_18130 [Asticcacaulis biprosthecum C19]
 gi|328843804|gb|EGF93373.1| hypothetical protein ABI_18130 [Asticcacaulis biprosthecum C19]
          Length = 295

 Score =  132 bits (333), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 118/203 (58%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y   +  L ++++++A +YF +  R  P++  +R++++M+ +  Y AGKY +A++  ++
Sbjct: 45  LYATGMERLDDKSWNEAGQYFEEVQRQHPYSEWSRRAIVMTIYTHYQAGKYAEASAASDQ 104

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           +I  YP S+   Y YY+  +   + I DV  DQ +T      +S +V RY +S Y K AR
Sbjct: 105 FIHLYPGSELTPYAYYMKAICSFEQIVDVGRDQASTTAAQALLSDVVRRYPSSEYAKDAR 164

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             + + ++QLA KE+EIGRYYL   + +AAI RF+ V + Y    H  EA+ RLVEA   
Sbjct: 165 VKIDMVQDQLAGKEMEIGRYYLNDNQPLAAIGRFKTVASTYQTTSHTPEALYRLVEANEV 224

Query: 240 LALMDEAREVVSLIQERYPQGYW 262
           + L +EA    +++   YP   W
Sbjct: 225 MGLHEEAMRNGAVLGYNYPGDRW 247


>gi|148554377|ref|YP_001261959.1| DNA uptake lipoprotein-like protein [Sphingomonas wittichii RW1]
 gi|148499567|gb|ABQ67821.1| DNA uptake lipoprotein-like protein [Sphingomonas wittichii RW1]
          Length = 261

 Score =  132 bits (333), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 128/244 (52%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           L K +  I   IA   LV     ++     D+    R    +Y  A   L    +  A  
Sbjct: 2   LRKVSRPIALMIAAATLVPLAGCATSKNKGDTKYVARDVDTLYNAAKERLDRHQYKLAAA 61

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            F++  R  P++  AR++ LMSAF  Y A +Y ++ +  + +I+ +P +++  Y  YL+ 
Sbjct: 62  LFDEVERQHPYSVWARRAQLMSAFSYYLARQYTESIASAQRFISIHPGNRDAPYALYLIA 121

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           + Y + I+DV  DQ+ T+  L  ++ ++ RY +S Y   AR  V +  + LA KE+EIGR
Sbjct: 122 IDYYEQIQDVTRDQKLTQNALDALNELIRRYPDSRYAADARVKVDLVNDHLAGKEMEIGR 181

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           +Y +RG+++A++ RF+ V+  Y    H  EA+ RL E+Y+ L +  EA    +++   YP
Sbjct: 182 FYQRRGDWLASVVRFRTVVDKYDTTSHTPEALMRLTESYLELGVPQEAERAAAVLGANYP 241

Query: 259 QGYW 262
              W
Sbjct: 242 GSKW 245


>gi|157825369|ref|YP_001493089.1| hypothetical protein A1C_01315 [Rickettsia akari str. Hartford]
 gi|157799327|gb|ABV74581.1| hypothetical protein A1C_01315 [Rickettsia akari str. Hartford]
          Length = 247

 Score =  132 bits (332), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 127/242 (52%), Gaps = 7/242 (2%)

Query: 30  IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
           I + F     +++S D+ +   T       +Y + V  L +Q + KA E F +     P 
Sbjct: 13  IGLVFSGCKSKKTSDDIVVPIPT-------LYNEGVTLLAKQKYKKAAEEFGRVFYQHPG 65

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
             +  ++ LM A+  + A +Y++A  + E +I  +P + ++ Y YYL  +SY  ++ DV 
Sbjct: 66  NAMTPQAELMQAYSLFLAAQYEEAVDVLEMFINLHPANVDIAYAYYLKALSYYMLVSDVN 125

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
           +DQ  T L       ++ R+ N+ Y   +   + +  + LA KE+ +GR+YLK+   +AA
Sbjct: 126 HDQSRTSLAKDSFEDVIARFPNTKYAIDSSLKIDLVNDHLAGKEMMVGRFYLKKQNPMAA 185

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
           I RF+ V+ NY    H+ EA+ RLVE Y+ L L DEA++  S++   YP   W  Y   L
Sbjct: 186 INRFEEVIDNYQTTSHSVEALYRLVEIYMMLGLPDEAQKYASVLGYNYPDSPWYSYAYKL 245

Query: 270 VK 271
           VK
Sbjct: 246 VK 247


>gi|254504434|ref|ZP_05116585.1| outer membrane assembly lipoprotein YfiO [Labrenzia alexandrii
           DFL-11]
 gi|222440505|gb|EEE47184.1| outer membrane assembly lipoprotein YfiO [Labrenzia alexandrii
           DFL-11]
          Length = 268

 Score =  132 bits (331), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 112/192 (58%)

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
           F +  + +P++  ++KSL+  A++ Y+ GKY +  +    ++T YP   +  Y+ YLVG 
Sbjct: 54  FEELDKLYPYSEYSKKSLVNLAYLNYTRGKYTETVTTANRFVTLYPGDPDSAYMLYLVGQ 113

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           SY + + D+  DQ  T+        +++R+  S YV  A+  + + ++QL  KE+++GRY
Sbjct: 114 SYYRQMPDITRDQATTERAASAYGELLQRFPESEYVPDAQRKLLIVQDQLGGKEMQVGRY 173

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           YL+R  YVAA+ RF+ V+ NY    H EEA+ RL EAY AL ++ EA+   +++   +P 
Sbjct: 174 YLERRNYVAAVNRFKTVVNNYQTTRHVEEALFRLTEAYYALGVISEAQTAAAVLGHNFPD 233

Query: 260 GYWARYVETLVK 271
             W +   TL+ 
Sbjct: 234 TQWYKDAYTLLN 245


>gi|146276754|ref|YP_001166913.1| TPR repeat-containing protein [Rhodobacter sphaeroides ATCC 17025]
 gi|145554995|gb|ABP69608.1| Tetratricopeptide TPR_2 repeat protein [Rhodobacter sphaeroides
           ATCC 17025]
          Length = 278

 Score =  131 bits (330), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 78/230 (33%), Positives = 126/230 (54%), Gaps = 5/230 (2%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVR-YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
           ++ V  L G    S ++  L++ T  + YQR  YE       +    +A  YF++  R +
Sbjct: 12  ALCVALLTGCGGGSQKEPPLENFTAEQIYQRGEYE----LEAQTKPDRAIRYFSEVERLY 67

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
           P+   A+++L+M A+  + A  Y++A    + ++  YP  ++  Y  YL+ +SY   I +
Sbjct: 68  PYTEWAKRALIMQAYSYHKAKNYEEARGAAQRFLDFYPGDEDAAYAQYLLALSYYDQIDE 127

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
           V  DQ  T   LQ +  ++E+Y +S Y + A     +  + LAAKE+EIGRYYLKRG Y 
Sbjct: 128 VGRDQGLTFQALQALRVVIEQYPDSEYAQSAILKFDLAFDHLAAKEMEIGRYYLKRGHYS 187

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           AAI RF+ V+  +    H  EA+ RLVE Y+AL L +EA+   +++   Y
Sbjct: 188 AAINRFRTVVEEFQTTTHTAEALHRLVEGYLALGLQNEAQTAGAILGHNY 237


>gi|119387190|ref|YP_918245.1| putative ComL lipoprotein [Paracoccus denitrificans PD1222]
 gi|119377785|gb|ABL72549.1| putative ComL lipoprotein [Paracoccus denitrificans PD1222]
          Length = 280

 Score =  131 bits (329), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 116/200 (58%), Gaps = 1/200 (0%)

Query: 59  EVYEKAVLFLKEQNFSK-AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           E+Y++    L+     K A +YF +  R +P++  A+++L+M A+  + A  Y++A    
Sbjct: 40  EIYKRGEYELENSRRPKDAVQYFTEVERLYPYSEWAKRALIMQAYSYHRARDYEEARGAA 99

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           + +I  YP  ++  Y  YL+ +SY   I ++  DQ  T   LQ +  ++E+Y ++ Y + 
Sbjct: 100 QRFIDTYPGDEDAAYAKYLLALSYYDQIDEIGRDQGLTFQALQSLREVIEQYPDTEYARS 159

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           A     +  + LAAKE+EIGRYYLKRG Y AAI RF++V+  +    H  EA+ RL EAY
Sbjct: 160 AILKFDLAFDHLAAKEMEIGRYYLKRGHYTAAINRFRVVVEEFQTTSHTPEALMRLTEAY 219

Query: 238 VALALMDEAREVVSLIQERY 257
           +AL L DEA+   +++   +
Sbjct: 220 LALGLNDEAQTAGAILGHNF 239


>gi|86137669|ref|ZP_01056246.1| competence lipoprotein ComL, putative [Roseobacter sp. MED193]
 gi|85826004|gb|EAQ46202.1| competence lipoprotein ComL, putative [Roseobacter sp. MED193]
          Length = 282

 Score =  131 bits (329), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 114/205 (55%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           ++++E+    L       A  YF++  R +P++  A+++L+M AF  + +  Y+ +    
Sbjct: 42  QQIFERGEFELARSRTKDAAFYFSEIERLYPYSEFAKQALIMQAFANHQSKDYEASRGAA 101

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           + +I  YP  ++  Y  YL+ +SY   I +V  DQ  T   LQ +  ++E Y +S Y   
Sbjct: 102 QRFIDFYPTDEDAAYAQYLLALSYYDQIDEVGRDQGLTFQALQSLRTVIEVYPDSEYATS 161

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           A     +  + LA KE+EIGRYYL+RG Y +AI RF++V+ ++    H  EA+ RLVEAY
Sbjct: 162 AILKFDLAFDHLAGKEMEIGRYYLRRGHYTSAISRFRVVVEDFQTTSHTAEALHRLVEAY 221

Query: 238 VALALMDEAREVVSLIQERYPQGYW 262
           ++L L +EA+   +++   Y    W
Sbjct: 222 LSLGLTEEAQTAGAILGHNYQSTDW 246


>gi|297717818|gb|ADI50052.1| DNA uptake lipoprotein [Candidatus Odyssella thessalonicensis L13]
          Length = 278

 Score =  131 bits (329), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 119/204 (58%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y  A   +   +++ A + F +  R  P++  + K+ LMSA+  Y A KY +A     
Sbjct: 35  QLYNMAKDQMDSGSYNTAAKTFAEVERQHPYSEWSLKAQLMSAYCYYEAKKYTEAIEGYN 94

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            +I  +P  +++ Y YY+VG+SY + I  V  DQ  T+   +    ++ R+ +SPY K A
Sbjct: 95  VFIQLHPGHEHIPYAYYMVGLSYYEQIPTVHRDQTVTEKAQEAFQEVINRFPDSPYAKDA 154

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
           +F + + R+ LA KE+++GRYYL++  Y+AA+ RF+ V+  +    H  EA+ R+VE Y+
Sbjct: 155 KFKMDLLRDHLAGKEMDVGRYYLRQRSYLAAVNRFKEVVDRFQTTSHVPEALHRMVECYL 214

Query: 239 ALALMDEAREVVSLIQERYPQGYW 262
           AL L+++A +  +++   +P   W
Sbjct: 215 ALGLVEQAYQTAAILGHNFPGSLW 238


>gi|103486038|ref|YP_615599.1| DNA uptake lipoprotein [Sphingopyxis alaskensis RB2256]
 gi|98976115|gb|ABF52266.1| DNA uptake lipoprotein [Sphingopyxis alaskensis RB2256]
          Length = 264

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/233 (33%), Positives = 123/233 (52%), Gaps = 7/233 (3%)

Query: 30  IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
           +A C   G  +Q +R V  D  T       +Y  A   L    +  A   F++  R  P+
Sbjct: 24  LAACAGGGGVKQDTRYVARDVNT-------LYRAAQERLDRGQYGIAAALFDEVERQHPY 76

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +  AR++ LMS+F  Y   +Y  A    + ++  +P +K+  Y YYL+ +SY + I DV 
Sbjct: 77  SPWARRAQLMSSFSYYMDREYTPAIEAAQRFLAIHPGNKDAPYAYYLIALSYYEQISDVT 136

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
            DQR T+     +  IV RY +S Y   AR  + + ++ LA KE+EIGR+Y +   ++AA
Sbjct: 137 RDQRITQQAQAALGEIVRRYPDSRYAADARLKLDLVQDHLAGKEMEIGRFYQRSSNWLAA 196

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
             RF+ V+  Y    HA EA+ RL E+Y+AL + +EA++  +++   YP   W
Sbjct: 197 SIRFREVVDKYQTTSHAPEALYRLTESYLALGIPEEAKKSAAVLGANYPGNEW 249


>gi|83949542|ref|ZP_00958275.1| competence lipoprotein ComL, putative [Roseovarius nubinhibens ISM]
 gi|83837441|gb|EAP76737.1| competence lipoprotein ComL, putative [Roseovarius nubinhibens ISM]
          Length = 283

 Score =  130 bits (328), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 119/205 (58%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           + ++E+    L  +N+  A + F +  R +P++ + +++++M A+  +    Y+ + S  
Sbjct: 43  QHIFERGEYDLSRRNYDLAAQSFGEIERLYPYSELTKRAVIMQAYSHHLDKDYEASRSAA 102

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           + YI  YP  ++  Y  YL+ +SY   I +V  DQ  T L LQ + +++E Y +S Y + 
Sbjct: 103 QRYIDFYPTDEDAAYAQYLLALSYYDQIDEVGRDQGLTFLALQELRKVIEIYPDSEYARS 162

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           A     +  + LA+KE+E+GRYYLKR  + AAI RF++V+ ++    H  EA+ RLVEAY
Sbjct: 163 AILKFDLAFDHLASKEMEVGRYYLKRDHFSAAINRFRVVVEDFQTTSHTPEALHRLVEAY 222

Query: 238 VALALMDEAREVVSLIQERYPQGYW 262
           ++L L++EA+   +++   +    W
Sbjct: 223 LSLGLVNEAQTAAAILGHNFRATDW 247


>gi|197105773|ref|YP_002131150.1| DNA uptake lipoprotein [Phenylobacterium zucineum HLK1]
 gi|196479193|gb|ACG78721.1| DNA uptake lipoprotein [Phenylobacterium zucineum HLK1]
          Length = 305

 Score =  130 bits (328), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 67/192 (34%), Positives = 110/192 (57%)

Query: 73  FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
           +++A  YF +  R  P++  +R+S+LM A+  Y +  Y +A    + +I  YP +    Y
Sbjct: 56  WNQAINYFQEVERQHPYSEWSRRSILMQAYAHYQSNDYPEAIGDADRFIQLYPGNPAAAY 115

Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
            +Y+  + Y + I DV  DQ AT   L+ +  +V+RY  S Y + AR  + +  +QLA K
Sbjct: 116 AHYIKAICYFEQIVDVGRDQAATGQALEALRAVVQRYPASEYAQDARLKIDMVNDQLAGK 175

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           E+ +GR+YL+ G+ +AA+ RF+ V+  Y    H  EA+ RLVEAY+ L L +EA+   ++
Sbjct: 176 EMTVGRWYLRNGDTLAAVNRFKTVVDRYQTTTHTPEALYRLVEAYLTLGLTEEAKRNGAV 235

Query: 253 IQERYPQGYWAR 264
           +   YP   W R
Sbjct: 236 LGYNYPGDPWYR 247


>gi|326387607|ref|ZP_08209213.1| DNA uptake lipoprotein [Novosphingobium nitrogenifigens DSM 19370]
 gi|326207653|gb|EGD58464.1| DNA uptake lipoprotein [Novosphingobium nitrogenifigens DSM 19370]
          Length = 268

 Score =  130 bits (328), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 124/234 (52%), Gaps = 5/234 (2%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
           SI +    G  +      Y+    D      +Y  A L L + +   A   F++  R  P
Sbjct: 22  SIGLAGCAGGNKTKKDVAYVARDVDT-----LYMAAKLRLDQGDAKAAAALFDEVERQHP 76

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
           ++  AR++ LMS+F  Y A  Y ++    + +++ +P +K+  Y YYLV + Y + I DV
Sbjct: 77  YSPWARRAQLMSSFSYYMARDYAKSIQAAQRFLSIHPGNKDAPYAYYLVALCYYERISDV 136

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
             DQ+ T+  LQ ++ ++ RY  + Y   A+  + +  + LA KE+E+GR+Y + G+++A
Sbjct: 137 TRDQKDTQQALQALNEVIRRYPATTYATDAKVKLDLVNDHLAGKEMEVGRFYERSGKWLA 196

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
              RF+ V+  Y    H  EA+ RLVE Y++L + +EA++  +++   YP   W
Sbjct: 197 GTMRFRAVVDKYQQTSHTPEALYRLVECYLSLGIPEEAQKAAAVLGNNYPGNEW 250


>gi|254460220|ref|ZP_05073636.1| competence lipoprotein ComL [Rhodobacterales bacterium HTCC2083]
 gi|206676809|gb|EDZ41296.1| competence lipoprotein ComL [Rhodobacteraceae bacterium HTCC2083]
          Length = 289

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 112/204 (54%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++YE+    L+ +    A  YF +  R +P++  A++ L+M AF  +    Y+ + +  +
Sbjct: 50  QIYERGEFELERKRDDDAAFYFGEVERLYPYSEWAKRGLIMQAFAYHKDKDYENSRASAQ 109

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            +I  YP   +  Y  YL+ +SY   I D+  DQ  T   LQ +  ++ERY +S Y   A
Sbjct: 110 RFIDVYPTDDDAAYAQYLLALSYYDQIEDLGRDQGLTFQALQGLRTVIERYPDSEYTSSA 169

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
                +  + LA KE+EIGRYYL+R  Y ++I RF++V+ ++    H  EA+ RLVE+Y+
Sbjct: 170 ILKFDLAFDHLAGKEMEIGRYYLRRDHYTSSINRFRVVVEDFQTTTHTPEALHRLVESYL 229

Query: 239 ALALMDEAREVVSLIQERYPQGYW 262
           +L L +EA+   +++   Y    W
Sbjct: 230 SLGLNEEAQTAGAILGHNYKSTEW 253


>gi|126740309|ref|ZP_01755997.1| competence lipoprotein ComL, putative [Roseobacter sp. SK209-2-6]
 gi|126718445|gb|EBA15159.1| competence lipoprotein ComL, putative [Roseobacter sp. SK209-2-6]
          Length = 283

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 112/204 (54%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           +++E+    L       A  YF++  R +P++  A+++L+M AF  + +  Y+ +    +
Sbjct: 44  QIFERGEFELARSRTKDAAYYFSEIERLYPYSEYAKQALIMQAFAYHQSKDYENSRGAAQ 103

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            +I  YP  ++  Y  YL+ +SY   I +V  DQ  T   LQ +  ++E Y +S Y   A
Sbjct: 104 RFIDFYPTDEDAAYAQYLLALSYYDQIDEVGRDQGLTFQALQSLLTVIEVYPDSEYANAA 163

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
                +  + LA KE+EIGRYYL+RG + +AI RF++V+  Y    H  EA+ RLVEAY+
Sbjct: 164 ILKFDLAFDHLAGKEMEIGRYYLRRGHFTSAINRFRVVVEEYQTTTHTPEALHRLVEAYL 223

Query: 239 ALALMDEAREVVSLIQERYPQGYW 262
           +L L DEA+   +++   Y    W
Sbjct: 224 SLGLTDEAQTAGAILGHNYQSSEW 247


>gi|163732123|ref|ZP_02139569.1| competence lipoprotein ComL, putative [Roseobacter litoralis Och
           149]
 gi|161394421|gb|EDQ18744.1| competence lipoprotein ComL, putative [Roseobacter litoralis Och
           149]
          Length = 273

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 112/204 (54%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           +++E+    L       A  YF +  R +P++  AR++L+M AF  +    Y  + S  +
Sbjct: 34  QIFERGEFELTRNRPDDAAFYFAEIERLYPYSDWARRALIMQAFSYHQDQDYPNSRSAAQ 93

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            +I  YP+  +  Y  YL+ +SY   I +V  DQ  T   LQ + + +ERY +S Y + +
Sbjct: 94  RFIDFYPDDDDAAYAQYLLALSYYDQIDEVGRDQGLTFQALQALRQTIERYPDSEYARAS 153

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
                +  + LA KE+EIGRYYL+R  + AAI RF++V+ ++    H  EA+ RLVEAY+
Sbjct: 154 ILKFDLAFDHLAGKEMEIGRYYLRRDHFAAAINRFRVVVEDFQTTSHTPEALHRLVEAYL 213

Query: 239 ALALMDEAREVVSLIQERYPQGYW 262
           +L L DEA+   +++   Y    W
Sbjct: 214 SLGLTDEAQTAGAILGYNYQSTIW 237


>gi|296285037|ref|ZP_06863035.1| DNA uptake lipoprotein [Citromicrobium bathyomarinum JL354]
          Length = 268

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/203 (34%), Positives = 112/203 (55%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y  A   L   N   A   F++  R  P++  AR++ LMSAF  Y +  Y +A    + 
Sbjct: 45  LYATAKQRLDRGNPQLAAALFDEVERQHPYSPWARRAQLMSAFSYYVSRDYSKAIQSAQR 104

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           +++ +P +K+  Y YYL+ +SY + I DV  DQ+ T+  L  +  +  R+  S Y   AR
Sbjct: 105 FLSIHPGNKDAPYAYYLIALSYYEQISDVQRDQKITEQALVALREVERRFPQSEYAADAR 164

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             + + R+ LA KE++IGR+Y K G++ AA  RFQ V+ NY    HA EA+ RL E  +A
Sbjct: 165 LKIDLVRDHLAGKEMDIGRFYEKSGKWTAAQIRFQNVVENYQTTSHAAEALYRLTETSLA 224

Query: 240 LALMDEAREVVSLIQERYPQGYW 262
           L +  EA++  +++   YP   W
Sbjct: 225 LGIPQEAKKYAAVLGANYPGSEW 247


>gi|77462668|ref|YP_352172.1| putative ComL lipoprotein [Rhodobacter sphaeroides 2.4.1]
 gi|77387086|gb|ABA78271.1| Putative ComL lipoprotein [Rhodobacter sphaeroides 2.4.1]
          Length = 278

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/230 (33%), Positives = 126/230 (54%), Gaps = 5/230 (2%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVR-YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
           ++ V  + G    S ++  L++ T  + YQR  YE            +A  YF++  R +
Sbjct: 12  ALCVALMAGCGGGSQKEPPLENFTAEQIYQRGEYE----LEARTKPDRAIRYFSEVERLY 67

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
           P+   A+++L+M A+  + A  Y++A    + ++  YP  ++  Y  YL+ +SY   I +
Sbjct: 68  PYTEWAKRALIMQAYSYHKAKDYEEARGAAQRFLDFYPGDEDAAYAQYLLALSYYDQIDE 127

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
           V  DQ  T   LQ +  ++E Y  S Y + A     +  + LAAKE+EIGRYYLKRG Y 
Sbjct: 128 VGRDQGLTFQALQALRVVIEDYPESEYAQSAILKFDLAFDHLAAKEMEIGRYYLKRGHYT 187

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           AAI RF+ V+ ++    H  EA+ RLVE+Y+AL L++EA+   +++   Y
Sbjct: 188 AAINRFRTVVEDFQTTTHTAEALHRLVESYLALGLVNEAQTAGAILGHNY 237


>gi|110680523|ref|YP_683530.1| competence lipoprotein ComL, putative [Roseobacter denitrificans
           OCh 114]
 gi|109456639|gb|ABG32844.1| competence lipoprotein ComL, putative [Roseobacter denitrificans
           OCh 114]
          Length = 288

 Score =  130 bits (326), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 112/204 (54%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           +++E+    L       A  YF +  R +P++  AR++L+M AF  +    Y  + S  +
Sbjct: 49  QIFERGEFELTRNRPDDAAFYFAEIERLYPYSDWARRALIMQAFSYHQDQDYPNSRSAAQ 108

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            +I  YP+  +  Y  YL+ +SY   I +V  DQ  T   LQ + + +ERY +S Y + +
Sbjct: 109 RFIDFYPDDDDAAYAQYLLALSYYDQIDEVGRDQGLTFQALQALRQTIERYPDSEYARSS 168

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
                +  + LA KE+EIGRYYL+R  + AAI RF++V+ ++    H  EA+ RLVEAY+
Sbjct: 169 ILKFDLAFDHLAGKEMEIGRYYLRRDHFAAAINRFRVVVEDFQTTSHTPEALHRLVEAYL 228

Query: 239 ALALMDEAREVVSLIQERYPQGYW 262
           +L L D+A+   +++   Y    W
Sbjct: 229 SLGLTDQAQTAAAILGYNYQSTVW 252


>gi|260434236|ref|ZP_05788207.1| tetratricopeptide TPR_2 repeat protein [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260418064|gb|EEX11323.1| tetratricopeptide TPR_2 repeat protein [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 287

 Score =  130 bits (326), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 115/204 (56%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           +++ +    L +     A  YF++  R +P++  A++SL+M AF  +S   Y+++ +  +
Sbjct: 48  QIFTRGEFELSQNRPEDAAWYFSEVERLYPYSDWAKRSLIMQAFAFHSDKNYEESRAAAQ 107

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            YI  YP  ++  Y  YL+ +SY   I +V  DQ  T   LQ +  ++E Y +S Y   A
Sbjct: 108 RYIDFYPTDEDAAYAQYLLALSYYDQIDEVGRDQGLTFQALQALRTVIEVYPDSEYATSA 167

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
                +  + LA KE+EIGRYYL++  Y AAI RF++V+ ++    H  EA+ RL+EAY+
Sbjct: 168 VLKFDLAFDHLAGKEMEIGRYYLRQDHYAAAINRFRVVVEDFQTTTHTAEALYRLIEAYL 227

Query: 239 ALALMDEAREVVSLIQERYPQGYW 262
           AL L+DEA+   +++   Y    W
Sbjct: 228 ALGLVDEAQSAGAILGYNYQSSEW 251


>gi|85703757|ref|ZP_01034861.1| Putative ComL lipoprotein [Roseovarius sp. 217]
 gi|85672685|gb|EAQ27542.1| Putative ComL lipoprotein [Roseovarius sp. 217]
          Length = 265

 Score =  130 bits (326), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 120/205 (58%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           ++++E+    L +++   A   F +  R +P++ +A+++++M AF  + A +Y+++ +  
Sbjct: 25  QQIFERGEYDLAQRDPELAATSFAEVERLYPYSDLAKRAVIMQAFAHHQAKEYEESRAAA 84

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           + +I  YP  ++  Y  YL+ +SY   I +V  DQ  T   LQ +  ++ERY +S Y   
Sbjct: 85  QRFIDFYPTDEDAAYAQYLLALSYYDQIDEVGRDQGLTFQALQSLREVIERYPDSEYANA 144

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           A     +  + LA+KE+EIGRYYLKR  + AA  RF++V+ ++    H  EA+ RLVE+Y
Sbjct: 145 AILKFDLAFDHLASKEMEIGRYYLKRDNFAAAANRFRVVVEDFQTTTHTAEALHRLVESY 204

Query: 238 VALALMDEAREVVSLIQERYPQGYW 262
           ++L L++EAR   +++   +    W
Sbjct: 205 LSLGLVNEARTAGAILGHNFQGTDW 229


>gi|51473383|ref|YP_067140.1| lipoprotein [Rickettsia typhi str. Wilmington]
 gi|51459695|gb|AAU03658.1| probable lipoprotein [Rickettsia typhi str. Wilmington]
          Length = 251

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 131/248 (52%), Gaps = 7/248 (2%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L+ F  I +       +++S D+ +   T       +Y + ++ L ++ + KA E F + 
Sbjct: 7   LSAFLVIGLILSGCKSKKNSNDIVVPIAT-------LYNEGIILLDKKKYKKAAEEFGKI 59

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
               P   +  ++ LM A+  + A +Y++A  + + +I  +P + ++ Y YYL  +SY  
Sbjct: 60  FYQHPGNEMTPQAELMQAYALFLAAQYEEAVDILDMFINLHPANVDIAYAYYLKALSYYM 119

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
           +I DV +DQ  T L       ++ ++ N+ Y   A   + +  + LA KE+ IGR+YLK+
Sbjct: 120 LISDVNHDQSRTFLSKDSFEDVITKFPNTKYAIDASLKIDLVNDHLAGKEMMIGRFYLKK 179

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
              +AAI RF+ V+ NY    H+ EA+ RLVE+Y+ L L DEA++  S++   YP   W 
Sbjct: 180 KNPIAAINRFEEVIDNYQTTYHSVEALYRLVESYMMLGLHDEAKKYASVLGYNYPDSKWY 239

Query: 264 RYVETLVK 271
            Y   LVK
Sbjct: 240 SYAYRLVK 247


>gi|99080532|ref|YP_612686.1| competence lipoprotein ComL, putative [Ruegeria sp. TM1040]
 gi|99036812|gb|ABF63424.1| competence lipoprotein ComL putative [Ruegeria sp. TM1040]
          Length = 283

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 111/204 (54%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++YE+    L       A  +F++  R +P++  A++SL+M AF  + A  Y+ + S  +
Sbjct: 44  QIYERGEFELARSREKDAAYFFSEVERLYPYSEWAKQSLIMQAFTYHQAEDYENSRSAAQ 103

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            YI  YP   +  Y  YL+ +SY   I +V  DQ  T   LQ +  ++E Y  S Y   A
Sbjct: 104 RYIDFYPTDADAAYAQYLLALSYYDQIDEVGRDQGLTFQALQALRTVIEVYPESEYASSA 163

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
                +  + LA KE+EIGRYYLKR  Y AAI RF++V+ ++    H  EA+ RL+EAY+
Sbjct: 164 ILKFDLAFDHLAGKEMEIGRYYLKRQHYSAAINRFRVVVEDFQTTSHTAEALYRLIEAYL 223

Query: 239 ALALMDEAREVVSLIQERYPQGYW 262
           +L L DEA+   +++   +    W
Sbjct: 224 SLGLTDEAQSAGAILGHNFQSTDW 247


>gi|94497005|ref|ZP_01303579.1| DNA uptake lipoprotein [Sphingomonas sp. SKA58]
 gi|94423681|gb|EAT08708.1| DNA uptake lipoprotein [Sphingomonas sp. SKA58]
          Length = 266

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 123/240 (51%), Gaps = 3/240 (1%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           A T    IA   L G     ++   L    DV     +Y      L    +  A   F++
Sbjct: 15  AATALVLIASPVLTGCSTSKNKADTLYVARDVS---TLYNSGKDRLDRGQYKLAAALFDE 71

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
             R  P++  AR++ LMSAF  Y    Y ++ S  + +++ +  +K+  Y YYL+ + Y 
Sbjct: 72  VERQHPYSPWARRAQLMSAFSYYMNRDYAESISAAQRFLSIHTGNKDAPYAYYLIAICYY 131

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
           + I DV  DQ+ T+  L  +  ++ RY  + Y   AR  V +  + LA KE+E+GR+Y +
Sbjct: 132 EQIADVTRDQKITQQALDSLGELIRRYPQTRYAADARLKVDLVNDHLAGKEMEVGRFYQR 191

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           RG+++AA  RF+ V+  Y    H  EA+ RLVE+Y++L +  EA++  +++   YP   W
Sbjct: 192 RGQWLAATLRFRTVIDKYQTTTHTPEALERLVESYLSLGIPAEAQKAAAVLGRNYPGTKW 251


>gi|56696099|ref|YP_166453.1| competence lipoprotein ComL, putative [Ruegeria pomeroyi DSS-3]
 gi|56677836|gb|AAV94502.1| competence lipoprotein ComL, putative [Ruegeria pomeroyi DSS-3]
          Length = 284

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 75/230 (32%), Positives = 122/230 (53%), Gaps = 4/230 (1%)

Query: 33  CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
           C   G+   + R   LD  T      +++E+    L  +    A  YF++  R +P++  
Sbjct: 23  CGGGGFRTAADRSQNLDGYT----PEQIFERGEYELSAKRTEDAAYYFSEVERLYPYSNW 78

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           A+++L+M AF  +S   Y ++ +  + YI  YP  ++  Y  YL+ +SY   I +V  DQ
Sbjct: 79  AKRALIMQAFAYHSGKDYPESRAAAQRYIDFYPADEDAAYAQYLLALSYYDQIDEVGRDQ 138

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
             T   LQ +  ++E Y +S Y   A     +  + LAAKE+EIGRYYL+R  + AAI R
Sbjct: 139 GLTFQALQALRTVIEVYPDSEYATSAILKFDLAFDHLAAKEMEIGRYYLRRQHFSAAINR 198

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           F++V+ ++    H  EA+ RLVEAY++L L  EA+   +++   Y    W
Sbjct: 199 FRVVVEDFQTTTHTAEALHRLVEAYLSLGLEAEAQTAGAILGHNYQSSEW 248


>gi|118590884|ref|ZP_01548284.1| putative lipoprotein [Stappia aggregata IAM 12614]
 gi|118436406|gb|EAV43047.1| putative lipoprotein [Stappia aggregata IAM 12614]
          Length = 270

 Score =  129 bits (325), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 108/183 (59%)

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
           F +  + +P++  ++KSL+  AF+ YS GKY +  +  + ++T YP  ++  Y+ YL G 
Sbjct: 58  FEELDKLYPYSEYSKKSLVNLAFLNYSRGKYTETVTAAKRFVTLYPGDEDSAYMLYLAGQ 117

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           +Y + + D+  DQ  T+      + +++R+  S YV  A   + +  +QL  KE+++GR+
Sbjct: 118 AYFRQMPDITRDQAVTRKAAGAFNELIQRFPESEYVPDAESKLRIVHDQLGGKEMQVGRF 177

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           YL++  Y+A I RF+ V+ +Y    H EEA+ RL EAY AL +++EA+   +++   YP 
Sbjct: 178 YLQKRNYIAGINRFKTVVVDYQTTRHVEEALFRLTEAYYALGVVNEAQTAAAVLGHNYPD 237

Query: 260 GYW 262
             W
Sbjct: 238 SQW 240


>gi|126461561|ref|YP_001042675.1| TPR repeat-containing protein [Rhodobacter sphaeroides ATCC 17029]
 gi|221638526|ref|YP_002524788.1| hypothetical protein RSKD131_0427 [Rhodobacter sphaeroides KD131]
 gi|332557550|ref|ZP_08411872.1| Tetratricopeptide TPR_2 repeat protein precursor [Rhodobacter
           sphaeroides WS8N]
 gi|126103225|gb|ABN75903.1| Tetratricopeptide TPR_2 repeat protein [Rhodobacter sphaeroides
           ATCC 17029]
 gi|221159307|gb|ACM00287.1| Tetratricopeptide TPR_2 repeat protein precursor [Rhodobacter
           sphaeroides KD131]
 gi|332275262|gb|EGJ20577.1| Tetratricopeptide TPR_2 repeat protein precursor [Rhodobacter
           sphaeroides WS8N]
          Length = 278

 Score =  129 bits (325), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 77/230 (33%), Positives = 126/230 (54%), Gaps = 5/230 (2%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVR-YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
           ++ V  + G    S ++  L++ T  + YQR  YE            +A  YF++  R +
Sbjct: 12  ALCVALVAGCGGGSQKEPPLENFTAEQIYQRGEYE----LEARTKPDRAIRYFSEVERLY 67

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
           P+   A+++L+M A+  + A  Y++A    + ++  YP  ++  Y  YL+ +SY   I +
Sbjct: 68  PYTEWAKRALIMQAYSYHKAKDYEEARGAAQRFLDFYPGDEDAAYAQYLLALSYYDQIDE 127

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
           V  DQ  T   LQ +  ++E Y  S Y + A     +  + LAAKE+EIGRYYLKRG Y 
Sbjct: 128 VGRDQGLTFQALQALRVVIEDYPESEYAQSAILKFDLAFDHLAAKEMEIGRYYLKRGHYT 187

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           AAI RF+ V+ ++    H  EA+ RLVE+Y+AL L++EA+   +++   Y
Sbjct: 188 AAINRFRTVVEDFQTTTHTAEALHRLVESYLALGLVNEAQTAGAILGHNY 237


>gi|315498683|ref|YP_004087487.1| outer membrane assembly lipoprotein yfio [Asticcacaulis excentricus
           CB 48]
 gi|315416695|gb|ADU13336.1| outer membrane assembly lipoprotein YfiO [Asticcacaulis excentricus
           CB 48]
          Length = 302

 Score =  129 bits (324), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 123/226 (54%), Gaps = 5/226 (2%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G  +Q +R VY +   +      +Y   +  L E+++++A +YF +  R  P++  +R+S
Sbjct: 36  GKPKQRTRLVYEERPVEA-----LYNTGMQRLDEKSWNEAVDYFEEVERQHPYSEWSRRS 90

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
           ++M  +  Y A  Y ++ +  E +I  YP S    Y YY+  ++Y + I DV  DQ  T+
Sbjct: 91  IIMEIYAHYQANDYNESTAAAERFIKLYPGSPLTPYAYYMRAINYFEQIVDVGRDQAYTE 150

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
               Y+  IV+RY  + Y + A+  + +  +QLA KE+EIGR+YL + + +AAI RF+ V
Sbjct: 151 TAQAYLREIVQRYPGTEYARDAQVKLDMVYDQLAGKEMEIGRFYLAQNQPLAAIGRFKTV 210

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           +  Y    H  EA+ RLVEA + + + DEA    +++   Y    W
Sbjct: 211 ITRYQTTSHTPEALYRLVEANLMMGITDEANRNAAVLGYNYAGDRW 256


>gi|255263345|ref|ZP_05342687.1| tetratricopeptide TPR_2 repeat protein [Thalassiobium sp. R2A62]
 gi|255105680|gb|EET48354.1| tetratricopeptide TPR_2 repeat protein [Thalassiobium sp. R2A62]
          Length = 284

 Score =  129 bits (324), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 67/204 (32%), Positives = 112/204 (54%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E++++    L       A  YF +  R +P++  A+++L+M AF  +    Y  + S  +
Sbjct: 45  EIFQRGEFELNRGREDDAAFYFGEIERLYPYSEWAKRALIMQAFAYHKDRDYPNSRSSAQ 104

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            +I  YP  ++  Y  YL+ +SY   I ++  DQ  T   LQ +  ++ERY +S Y + +
Sbjct: 105 RFIDFYPADEDAAYAQYLLALSYYDQIDEIGRDQGLTFQALQALRTVIERYPDSEYARSS 164

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
                +  + LAAKE+EIGRYY++ G Y A+I RF+ V+ ++    H  EA+ RLVEAY+
Sbjct: 165 ILKFDLAFDHLAAKEMEIGRYYIQDGHYAASINRFRTVVEDFQTTSHTPEALHRLVEAYL 224

Query: 239 ALALMDEAREVVSLIQERYPQGYW 262
           +L L DEA+   +++   Y    W
Sbjct: 225 SLGLTDEAQTAGAILGHNYQSTEW 248


>gi|89055239|ref|YP_510690.1| competence lipoprotein ComL, putative [Jannaschia sp. CCS1]
 gi|88864788|gb|ABD55665.1| competence lipoprotein ComL putative [Jannaschia sp. CCS1]
          Length = 302

 Score =  129 bits (324), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 70/194 (36%), Positives = 111/194 (57%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y++A   L+      A E F +  R  P++  A ++L+M+AF  +  G Y+ A    + 
Sbjct: 64  IYQQAEFELERGRADNAAELFIEVERLHPYSAWAERALIMAAFAYHEDGDYEAARVAAQR 123

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           Y+  YP +++  Y  YL+ +SY   I  V  DQ  T   LQ +  ++ERY +S YV+ A 
Sbjct: 124 YLDFYPGNEDAAYAQYLLALSYYDQIDQVGRDQGVTFQALQALRVVIERYPDSDYVQDAI 183

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
               +  + LA KE+E+GRYYL+R  Y +AI RF++V+  +    H  EA+ RLVEAY+A
Sbjct: 184 LRFDLAFDHLAGKEMEVGRYYLRREHYTSAINRFRVVVEEFQTTSHTPEALLRLVEAYLA 243

Query: 240 LALMDEAREVVSLI 253
           L L DEA+   +++
Sbjct: 244 LGLTDEAQTAGAIL 257


>gi|91205917|ref|YP_538272.1| DNA uptake lipoprotein [Rickettsia bellii RML369-C]
 gi|157826722|ref|YP_001495786.1| DNA uptake lipoprotein [Rickettsia bellii OSU 85-389]
 gi|91069461|gb|ABE05183.1| DNA uptake lipoprotein [Rickettsia bellii RML369-C]
 gi|157802026|gb|ABV78749.1| DNA uptake lipoprotein [Rickettsia bellii OSU 85-389]
          Length = 253

 Score =  129 bits (323), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 127/251 (50%), Gaps = 9/251 (3%)

Query: 24  LTIFFSIAVCF---LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           L    S  +C    L G + + S D   D VT +     +Y + V  L+++ +  A E F
Sbjct: 3   LAKILSALLCLGLILNGCKSKKSND---DLVTPIS---TLYNEGVTLLEKKKYKNAAEEF 56

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
            +     P      ++ LM A+  + A +Y++A  + + +I  +P + ++ Y YYL  +S
Sbjct: 57  EKIFYQHPGNEFTPQAELMQAYSLFLAAQYEEAVDVLDIFINLHPANVDIAYAYYLKALS 116

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
           Y  +I DV +DQ  T L       ++ ++ N+ Y   +   + +  + LA KE+ IGR+Y
Sbjct: 117 YYMLISDVNHDQSRTFLAKDSFEDLITKFPNTKYAIDSSLKIDLVNDHLAGKELTIGRFY 176

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           LK+   +AAI RF+ V+ NY    H  EA+ RL E+Y+ L L DEA +  S++   YP  
Sbjct: 177 LKKKNPMAAINRFEEVVENYQTTSHCVEALYRLTESYMMLGLSDEAMKYASVLGHNYPDS 236

Query: 261 YWARYVETLVK 271
            W  Y   L+K
Sbjct: 237 KWYSYAYKLIK 247


>gi|126729262|ref|ZP_01745076.1| competence lipoprotein ComL, putative [Sagittula stellata E-37]
 gi|126710252|gb|EBA09304.1| competence lipoprotein ComL, putative [Sagittula stellata E-37]
          Length = 265

 Score =  129 bits (323), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 114/205 (55%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +++YE+    +  +++     YF +  R +P++  A+++L+M A+  +    Y+ A    
Sbjct: 25  KQIYERGEYEMSRKDYEDGAFYFGEVERLYPYSDWAKRALIMQAYSYHKNKDYENARGAA 84

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           + YI  YP   +  Y  YL+ +SY   I  V  DQ  T   LQ +  ++ERY +S Y + 
Sbjct: 85  QRYIDFYPSDDDAAYAQYLLALSYYDQIELVGRDQGLTFQALQALRAVIERYPDSEYARS 144

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           +     +  + LA KE+EIGRYYLKR  + AAI RF++V+ ++    H  EA+ RLVEAY
Sbjct: 145 SILKFDLAFDHLAGKEMEIGRYYLKRDHFGAAISRFRVVVEDFQTTTHTPEALHRLVEAY 204

Query: 238 VALALMDEAREVVSLIQERYPQGYW 262
           ++L L++EA+   +++   Y    W
Sbjct: 205 LSLGLVEEAQTAAAILGYNYQSTEW 229


>gi|312114836|ref|YP_004012432.1| outer membrane assembly lipoprotein YfiO [Rhodomicrobium vannielii
           ATCC 17100]
 gi|311219965|gb|ADP71333.1| outer membrane assembly lipoprotein YfiO [Rhodomicrobium vannielii
           ATCC 17100]
          Length = 287

 Score =  128 bits (322), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 127/241 (52%), Gaps = 4/241 (1%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
            A T+  S+  C  +G    SS    LD     R   ++Y++A   L +   +KA E F 
Sbjct: 15  LATTLSSSLGGCGSMGSMFSSSESTQLDQ----RPPDQIYKEADDLLGQGKNNKAAELFE 70

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
           +  + +P++  A+KS LM+A+    AGK  +A +    +++ +P SK       ++  SY
Sbjct: 71  RIDQLYPYSEEAKKSTLMAAYAYQKAGKGPEAVAAARRFLSLHPGSKEAALAQEIIASSY 130

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            + I     DQ  TK  +  +  ++ RY +S Y + A+  + + R+ LAA E+ +GRY+ 
Sbjct: 131 FERISGPTRDQGETKKAIAELETLISRYPDSRYSEDAKRRIKLARDTLAASEMNVGRYWQ 190

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           K+G Y+ A+ RF+ V+  Y    H EEA+ RL E Y+AL +++EA+   +++   +P   
Sbjct: 191 KKGNYLGAVNRFKTVVTEYQQTTHVEEALMRLTECYMALGIVNEAQTAAAVLGHNFPDSP 250

Query: 262 W 262
           W
Sbjct: 251 W 251


>gi|307293329|ref|ZP_07573175.1| outer membrane assembly lipoprotein YfiO [Sphingobium
           chlorophenolicum L-1]
 gi|306881395|gb|EFN12611.1| outer membrane assembly lipoprotein YfiO [Sphingobium
           chlorophenolicum L-1]
          Length = 261

 Score =  128 bits (322), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 61/183 (33%), Positives = 107/183 (58%)

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
           F++  R  P++  AR++ LMSAF  Y    Y ++    + +++ +  +K+  Y YYL+ +
Sbjct: 64  FDEVERQHPYSPWARRAQLMSAFSYYMNKDYPESIGASQRFLSIHTGNKDAPYAYYLIAL 123

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
            Y + I DV  DQ+ T+  L  +  ++ RY ++ Y   AR  + +  + LA KE+EIGR+
Sbjct: 124 CYYEQIADVTRDQKVTQQALDALGELIRRYPDTRYAADARLKLDLVNDHLAGKEMEIGRF 183

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           Y +RG+++AA  RF+ V+  Y    H  EA+ RLVE+Y++L +  EA++  +++   YP 
Sbjct: 184 YQRRGQWLAATLRFRTVIDKYQTTTHTPEALERLVESYLSLGIPAEAQKAAAVLGRNYPG 243

Query: 260 GYW 262
             W
Sbjct: 244 SKW 246


>gi|149914537|ref|ZP_01903067.1| competence lipoprotein ComL, putative [Roseobacter sp. AzwK-3b]
 gi|149811330|gb|EDM71165.1| competence lipoprotein ComL, putative [Roseobacter sp. AzwK-3b]
          Length = 282

 Score =  128 bits (322), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 116/204 (56%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           +++E+A   L   +   A E F +  R +P++  A+++L+M AF  + A  Y+ + +  +
Sbjct: 43  QIFERAEYDLSRNDPDLAAEVFGEVERLYPYSEWAKRALIMQAFSYHQAEDYENSRASAQ 102

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            +I  YP  ++  Y  YL+ +SY   I +V  DQ  T   LQ +  ++ER+ +S Y + +
Sbjct: 103 RFIDFYPTDEDAAYAQYLLALSYYDQIDEVGRDQGLTFQALQSLREVIERHPDSEYAQSS 162

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
                +  + LAAKE+EIGRYYL+   + AAI RF++V+ ++    H  EA+ RLVEAY+
Sbjct: 163 VLKFDLAFDHLAAKEMEIGRYYLRGDHFSAAINRFRVVVEDFQTTSHTAEALHRLVEAYL 222

Query: 239 ALALMDEAREVVSLIQERYPQGYW 262
           +L L DEAR   +++   +    W
Sbjct: 223 SLGLTDEARTAGAILGYNFRGTQW 246


>gi|149201858|ref|ZP_01878832.1| Putative ComL lipoprotein [Roseovarius sp. TM1035]
 gi|149144906|gb|EDM32935.1| Putative ComL lipoprotein [Roseovarius sp. TM1035]
          Length = 265

 Score =  128 bits (321), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 119/205 (58%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           ++++E+    L +++   A + F +  R +P++ +A+++++M AF  +    Y+++ +  
Sbjct: 25  QQIFERGEYDLAQRDPDLAAKSFAEVERLYPYSDLAKRAVIMQAFAHHQDKAYEESRAAA 84

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           + +I  YP  ++  Y  YL+ +SY   I +V  DQ  T   LQ +  ++ERY +S Y   
Sbjct: 85  QRFIDFYPTDEDAAYAQYLLALSYYDQIDEVGRDQGLTFQALQSLREVIERYPDSEYANS 144

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           A     +  + LA+KE+EIGRYYLKR  + AA  RF++V+ ++    H  EA+ RLVE+Y
Sbjct: 145 AILKFDLAFDHLASKEMEIGRYYLKRDNFAAAANRFRVVVEDFQTTTHTAEALHRLVESY 204

Query: 238 VALALMDEAREVVSLIQERYPQGYW 262
           ++L L++EAR   +++   +    W
Sbjct: 205 LSLGLVNEARTAGAILGHNFQGTDW 229


>gi|294011614|ref|YP_003545074.1| putative lipoprotein [Sphingobium japonicum UT26S]
 gi|292674944|dbj|BAI96462.1| putative lipoprotein [Sphingobium japonicum UT26S]
          Length = 261

 Score =  127 bits (320), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 61/183 (33%), Positives = 107/183 (58%)

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
           F++  R  P++  AR++ LMSAF  Y    Y ++    + +++ +  +K+  Y YYL+ +
Sbjct: 64  FDEVERQHPYSPWARRAQLMSAFSYYMNQDYPESIGAAQRFLSIHTGNKDAPYAYYLIAL 123

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
            Y + I DV  DQ+ T+  L  +  ++ RY ++ Y   AR  + +  + LA KE+EIGR+
Sbjct: 124 CYYEQIADVTRDQKITQQALDALGELIRRYPDTRYAADARLKLDLVNDHLAGKEMEIGRF 183

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           Y +RG+++AA  RF+ V+  Y    H  EA+ RLVE+Y++L +  EA++  +++   YP 
Sbjct: 184 YQRRGQWLAATLRFRTVIDKYQTTTHTPEALERLVESYLSLGIPAEAQKAAAVLGRNYPG 243

Query: 260 GYW 262
             W
Sbjct: 244 SKW 246


>gi|260426152|ref|ZP_05780131.1| tetratricopeptide TPR_2 repeat protein [Citreicella sp. SE45]
 gi|260420644|gb|EEX13895.1| tetratricopeptide TPR_2 repeat protein [Citreicella sp. SE45]
          Length = 286

 Score =  127 bits (320), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 116/204 (56%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           +++E+    L  ++  +A  YF +  R +P++  ++++L+M A+  +    Y+ + S  +
Sbjct: 45  QIFERGEYELDRKDGERAAYYFGEVERLYPYSDWSKRALIMQAYAYHLEKDYENSRSSAQ 104

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            YI  YP   +  Y  YL+ +SY   I +V  DQ  T   LQ +  ++ERY +S Y + +
Sbjct: 105 RYIDFYPTDDDAAYAQYLLALSYYDQIEEVGRDQGLTFQALQALRTVIERYPDSEYARSS 164

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
                +  + LAAKE+EIGRYYL+R  Y AAI RF+ V+ ++    H  EA+ RLVEAY+
Sbjct: 165 ILKFDLAFDHLAAKEMEIGRYYLRRQHYGAAINRFRSVVEDFQTTTHTPEALHRLVEAYL 224

Query: 239 ALALMDEAREVVSLIQERYPQGYW 262
           +L L++EA+   +++   Y    W
Sbjct: 225 SLGLVNEAQTAGAILGYNYQGTVW 248


>gi|56552654|ref|YP_163493.1| outer membrane assembly lipoprotein YfiO [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|4378163|gb|AAD19408.1| unknown [Zymomonas mobilis subsp. mobilis ZM4]
 gi|56544228|gb|AAV90382.1| outer membrane assembly lipoprotein YfiO [Zymomonas mobilis subsp.
           mobilis ZM4]
          Length = 346

 Score =  127 bits (320), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 116/215 (53%), Gaps = 4/215 (1%)

Query: 52  TDVRY-QREV---YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           TD RY  R+V   Y      L    +  A  +F++  R  P++  AR++ LMSAF  Y A
Sbjct: 32  TDTRYVARDVDTLYNAGKQSLDSGQYKAAAAFFDEVERQHPYSIWARRAQLMSAFCNYRA 91

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
             Y  + +  + +++ +  +K+  Y  YLV M Y + I+DV +DQ  T+L L  M+ I+ 
Sbjct: 92  RNYSASIASAQRFLSIHTGNKDAPYAMYLVMMDYYEQIQDVNHDQHTTQLALDSMNDIIR 151

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
           RY ++PY   AR  + +  + L  KE+ IGR+Y +   ++AA  RF+ V+  Y    +  
Sbjct: 152 RYPDTPYAADARLKMDLVHDHLGGKEMAIGRFYEQSRLWLAATLRFRRVIDEYQTTTYVP 211

Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           EA+ RL E+Y+AL L  EAR   +++   +P   W
Sbjct: 212 EALERLTESYLALGLRAEARNAAAVLGANFPGSKW 246


>gi|332188478|ref|ZP_08390200.1| hypothetical protein SUS17_3597 [Sphingomonas sp. S17]
 gi|332011490|gb|EGI53573.1| hypothetical protein SUS17_3597 [Sphingomonas sp. S17]
          Length = 311

 Score =  127 bits (319), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 110/203 (54%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y  A   L +  + +A   F++  R  P++  AR++ LMSAF  Y    Y Q+    + 
Sbjct: 43  LYTAAKQRLDQHRYKEAALLFDEVERQHPYSIWARRAQLMSAFSYYLGRDYTQSIQSAQR 102

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           ++  +P +++  Y YYL+ + Y + I+DV  DQ+ T+  L  +  ++ RY N+ Y   AR
Sbjct: 103 FLAVHPGNRDAPYAYYLIALGYYEQIQDVTRDQKITRQALDALGELMRRYPNTRYAADAR 162

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             V +  + LA KE+EIGR+Y  R +++AA  RF+ V+  Y    H  EA+ RL E Y+A
Sbjct: 163 LKVDLVNDHLAGKEMEIGRFYEDRHQWLAASMRFRTVVDKYQTTSHTPEALMRLTETYLA 222

Query: 240 LALMDEAREVVSLIQERYPQGYW 262
           L +  EA    +++   YP   W
Sbjct: 223 LGVRPEAERAAAVLGANYPGSDW 245


>gi|163738728|ref|ZP_02146142.1| competence lipoprotein ComL, putative [Phaeobacter gallaeciensis
           BS107]
 gi|161388056|gb|EDQ12411.1| competence lipoprotein ComL, putative [Phaeobacter gallaeciensis
           BS107]
          Length = 282

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 115/204 (56%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++YE+    ++      A  YF++  R +P++  A+++L+M A+  +    Y+ + +  +
Sbjct: 43  QIYERGEFEMERNRTEDAAFYFSEIERLYPYSSWAKQALIMQAYAYHLGRDYEDSRAAAQ 102

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            YI  YP  ++  Y  YL+ +SY   I +V  DQ  T   LQ +  ++E Y +S Y   A
Sbjct: 103 RYIDFYPTEEDAAYAQYLLALSYYDQIDEVGRDQGLTFQALQSLRTVIEVYPDSEYASSA 162

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
                +  + LA KE+EIGRYYL++G Y +A+ RF++V+ ++    H  EA+ RLVEAY+
Sbjct: 163 ILKFDLAFDHLAGKEMEIGRYYLRKGHYTSAVNRFRVVVEDFQTTTHTAEALHRLVEAYL 222

Query: 239 ALALMDEAREVVSLIQERYPQGYW 262
           +L L++EA+   +++   Y    W
Sbjct: 223 SLGLVNEAQTAGAILGHNYQSTEW 246


>gi|254474921|ref|ZP_05088307.1| lipoprotein [Ruegeria sp. R11]
 gi|214029164|gb|EEB69999.1| lipoprotein [Ruegeria sp. R11]
          Length = 282

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 115/204 (56%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++YE+    ++      A  YF +  R +P++  A+++L+M A+  +    Y+++ +  +
Sbjct: 43  QIYERGEFEMERNRTKDAAFYFAEIERLYPYSSWAKQALIMQAYAYHLGRDYEESRAAAQ 102

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            YI  YP  ++  Y  YL+ +SY   I +V  DQ  T   LQ +  ++E Y +S Y   A
Sbjct: 103 RYIDFYPTEEDAAYAQYLLALSYYDQIDEVGRDQGLTFQALQSLRTVIEVYPDSEYANSA 162

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
                +  + LA KE+EIGRYYL++G Y +A+ RF++V+ ++    H  EA+ RLVEAY+
Sbjct: 163 ILKFDLAFDHLAGKEMEIGRYYLRKGHYTSAVNRFRVVVEDFQTTTHTAEALHRLVEAYL 222

Query: 239 ALALMDEAREVVSLIQERYPQGYW 262
           +L L++EA+   +++   Y    W
Sbjct: 223 SLGLVNEAQTAGAILGHNYQSTEW 246


>gi|114766759|ref|ZP_01445696.1| competence lipoprotein ComL, putative [Pelagibaca bermudensis
           HTCC2601]
 gi|114541016|gb|EAU44073.1| competence lipoprotein ComL, putative [Roseovarius sp. HTCC2601]
          Length = 275

 Score =  126 bits (317), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 121/213 (56%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +++YE+    L  ++  +A  YF++  R +P++  ++++L+M A+  ++   Y+ + S  
Sbjct: 35  QQIYERGEYELDRRDGEQAAYYFSEVERLYPYSEWSKRALIMQAYAFHTEKDYENSRSSA 94

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           + YI  YP  ++  Y  YL+ +SY   I +V  DQ  T   LQ +  ++ERY  S Y + 
Sbjct: 95  QRYIDFYPTDEDAAYAQYLLALSYYDQIEEVGRDQGLTFQALQALRTVIERYPESEYARS 154

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           +     +  + LA KE+EIGRYYL+   + AAI RF++V+ ++    H  EA+ RLVEAY
Sbjct: 155 SILKFDLAFDHLAGKEMEIGRYYLRDKHFGAAISRFRVVVEDFQTTTHTPEALHRLVEAY 214

Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLV 270
           ++L L+ EA+   +++   Y    W R   TL+
Sbjct: 215 LSLGLVQEAQSAGAILGYNYQGSEWYRDSYTLL 247


>gi|88657674|ref|YP_507792.1| putative competence protein ComL [Ehrlichia chaffeensis str.
           Arkansas]
 gi|88599131|gb|ABD44600.1| putative competence protein ComL [Ehrlichia chaffeensis str.
           Arkansas]
          Length = 250

 Score =  126 bits (317), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 73/217 (33%), Positives = 119/217 (54%), Gaps = 2/217 (0%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           R   E+YE A+     + +  A +   +    +PF+ VA K+ LM +F+ Y  G Y +A 
Sbjct: 36  RTADEMYESALKKSNAKEYKSAVKDLEEIDNLYPFSPVAIKARLMMSFLNYELGDYSRAE 95

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
              ++YI  YP+SK++D+ YYL  M+    I D+  DQ +   +L+ ++  +  + NS Y
Sbjct: 96  IYADDYIQLYPDSKDIDFAYYLRIMANYMQISDIDRDQSSVHKVLELLNEFIRLFPNSMY 155

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
           ++     + +    +A KE  IG++YL+RGEYVAAI RF  +L  Y D ++  E++ R+ 
Sbjct: 156 LEEVMKRLELVHQHIAGKEFSIGKFYLQRGEYVAAIKRFSTILNKYKDTKYYSESLYRIA 215

Query: 235 EAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           EAY+AL  +      +SL++E      W  Y E LVK
Sbjct: 216 EAYLALGDIAAYARYMSLLKECCIDTGW--YKEPLVK 250


>gi|157803367|ref|YP_001491916.1| hypothetical protein A1E_00915 [Rickettsia canadensis str. McKiel]
 gi|157784630|gb|ABV73131.1| hypothetical protein A1E_00915 [Rickettsia canadensis str. McKiel]
          Length = 247

 Score =  126 bits (317), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 134/248 (54%), Gaps = 7/248 (2%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L++ F I +       +++S DV +   T       +Y + ++ L+++ + KA E F + 
Sbjct: 7   LSVLFIIGLSLSGCKSKKNSDDVVVPIPT-------LYNEGIILLEKKKYKKAAEEFGRV 59

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
               P   +  ++ LM A+  + A +Y++A  + + +I  +P + ++ Y YYL  +SY  
Sbjct: 60  FYQHPGNEMTPQAELMQAYSLFLATQYEEAVDVLDMFINLHPANVDIAYAYYLKALSYYM 119

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
           +I DV +DQ  T L       I+E+++N+ Y   A   + +  + LA KE+ +GR+YLK+
Sbjct: 120 LISDVNHDQSRTFLAKDSFKDIIEKFSNTKYAIDASLKIDLVNDHLAGKEMMVGRFYLKK 179

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
              +AAI RF+ V+ +Y    H+ EA+ RL E+Y+ L L DEA++  S++   YP   W 
Sbjct: 180 KNPIAAINRFEEVINHYQTTSHSVEALYRLAESYMMLGLPDEAKKYASVLGYNYPDSQWY 239

Query: 264 RYVETLVK 271
            Y   LVK
Sbjct: 240 SYAYKLVK 247


>gi|254455886|ref|ZP_05069315.1| DNA uptake lipoprotein [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082888|gb|EDZ60314.1| DNA uptake lipoprotein [Candidatus Pelagibacter sp. HTCC7211]
          Length = 283

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 73/204 (35%), Positives = 115/204 (56%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E Y++ +  L+  +   A + FN+    FP +  A KS LM+A+  Y+   Y    +  E
Sbjct: 39  EAYQEGMKNLESGDVIYAAKKFNEAEILFPQSDWAPKSALMAAYSYYTQDYYADTIAELE 98

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            ++  YP SKN+DYVYYL+G+SY + I D   D ++     +Y   +++ Y N+ Y   A
Sbjct: 99  RFLRVYPLSKNLDYVYYLLGVSYYEQIVDEKKDLQSIIKAKKYFEILIQNYPNTNYSLDA 158

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
            F + +  + LAAKE+ IGRYY  + +++ AI RF+ V+ NY    +AEEA+ RLVE + 
Sbjct: 159 EFKIELVNDTLAAKEMYIGRYYFDKKKWIPAINRFKTVIDNYDTTLYAEEALHRLVEVHY 218

Query: 239 ALALMDEAREVVSLIQERYPQGYW 262
            L L DEA++  +L+   Y    W
Sbjct: 219 ILGLKDEAKKYANLLGYNYQSSIW 242


>gi|241762104|ref|ZP_04760187.1| outer membrane assembly lipoprotein YfiO [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|241373354|gb|EER62954.1| outer membrane assembly lipoprotein YfiO [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
          Length = 346

 Score =  126 bits (316), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 116/215 (53%), Gaps = 4/215 (1%)

Query: 52  TDVRY-QREV---YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           TD RY  R+V   Y      L    +  A  +F++  R  P++  AR++ LMSAF  Y A
Sbjct: 32  TDTRYVARDVDTLYNAGKQSLDSGQYKAAAAFFDEVERQHPYSIWARRAQLMSAFCNYRA 91

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
             Y  + +  + +++ +  +K+  Y  YLV M Y + I+DV +DQ  T+L L  M+ I+ 
Sbjct: 92  RNYSASIASAQRFLSIHTGNKDAPYAMYLVMMDYYEQIQDVNHDQHTTQLALDSMNDIIR 151

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
           RY ++PY   AR  + +  + L  KE+ IGR+Y +   ++AA  RF+ V+  Y    +  
Sbjct: 152 RYPDTPYAADARLKMDLVHDHLGGKEMAIGRFYEQSRLWLAATLRFRRVIDEYQTTTYVP 211

Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           EA+ RL E+Y+A+ L  EAR   +++   +P   W
Sbjct: 212 EALERLTESYLAMGLRVEARNAAAVLGANFPGSKW 246


>gi|260753695|ref|YP_003226588.1| outer membrane assembly lipoprotein YfiO [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|258553058|gb|ACV76004.1| outer membrane assembly lipoprotein YfiO [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 346

 Score =  126 bits (316), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 116/215 (53%), Gaps = 4/215 (1%)

Query: 52  TDVRY-QREV---YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           TD RY  R+V   Y      L    +  A  +F++  R  P++  AR++ LMSAF  Y A
Sbjct: 32  TDTRYVARDVDTLYNAGKQSLDSGQYKAAAAFFDEVERQHPYSIWARRAQLMSAFCNYRA 91

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
             Y  + +  + +++ +  +K+  Y  YLV M Y + I+DV +DQ  T+L L  M+ I+ 
Sbjct: 92  RNYSASIASAQRFLSIHTGNKDAPYAMYLVMMDYYEQIQDVNHDQHTTQLALDSMNDIIR 151

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
           RY ++PY   AR  + +  + L  KE+ IGR+Y +   ++AA  RF+ V+  Y    +  
Sbjct: 152 RYPDTPYAADARLKMDLVHDHLGGKEMAIGRFYEQSRLWLAATLRFRRVIDEYQTTTYVP 211

Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           EA+ RL E+Y+A+ L  EAR   +++   +P   W
Sbjct: 212 EALERLTESYLAMGLRVEARNAAAVLGANFPGSKW 246


>gi|73667425|ref|YP_303441.1| hypothetical protein Ecaj_0812 [Ehrlichia canis str. Jake]
 gi|72394566|gb|AAZ68843.1| protein of unknown function UPF0169 [Ehrlichia canis str. Jake]
          Length = 254

 Score =  126 bits (316), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 116/208 (55%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           R   E+YE A+     +++  A +   +    +PF+ VA K+ LM +F+ Y  G Y +A 
Sbjct: 36  RTADEMYESALKKSGIKDYKSAVKDLEEIDNLYPFSPVAIKARLMMSFLNYELGDYSRAE 95

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
              ++YI  YP+SK++D+ YYL  M+    I D+  DQ +   +L+ +   V  + NS Y
Sbjct: 96  IYADDYIQLYPDSKDIDFAYYLRIMANYMQISDIDRDQSSVNKVLELLDEFVRLFPNSIY 155

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
           ++     + +    +AAKE  IG++YL+RGEYVAAI RF  +L  Y D ++  E++ R+ 
Sbjct: 156 LEEVMKRLDLVHQHIAAKEFSIGKFYLQRGEYVAAIKRFSTILNKYEDTKYYSESLYRIA 215

Query: 235 EAYVALALMDEAREVVSLIQERYPQGYW 262
           EAY+AL  +    + +SL++E      W
Sbjct: 216 EAYLALGDVTAYAKYMSLLKECCINTGW 243


>gi|254464035|ref|ZP_05077446.1| DNA uptake lipoprotein [Rhodobacterales bacterium Y4I]
 gi|206684943|gb|EDZ45425.1| DNA uptake lipoprotein [Rhodobacterales bacterium Y4I]
          Length = 282

 Score =  125 bits (315), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 67/204 (32%), Positives = 112/204 (54%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++YE+    L  +    A  YF +  R +P++  A+++++M AF  +S   Y+ + +  +
Sbjct: 43  QIYERGEFELANRRPKDAVYYFAEIERLYPYSEWAKQAVIMQAFAYHSTRDYENSRAAAQ 102

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            +I  YP  ++  Y  YL+ +SY   I +V  DQ  T   LQ +  ++E Y +S Y   A
Sbjct: 103 RFIDFYPADEDAAYAQYLLALSYYDQIDEVGRDQGLTFQALQALRTVIEVYPDSQYATSA 162

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
                +  + LA KE+EIGRYYL+RG Y +AI RF++V+  +    H  EA+ RLVEAY+
Sbjct: 163 ILKFDLAFDHLAGKEMEIGRYYLRRGHYTSAINRFRVVVEEFQTTSHTPEALHRLVEAYL 222

Query: 239 ALALMDEAREVVSLIQERYPQGYW 262
           +L L  EA+   +++   +    W
Sbjct: 223 SLGLTAEAQTAAAILGHNFQSTEW 246


>gi|209545278|ref|YP_002277507.1| outer membrane assembly lipoprotein YfiO [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209532955|gb|ACI52892.1| outer membrane assembly lipoprotein YfiO [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 319

 Score =  125 bits (315), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 128/249 (51%), Gaps = 7/249 (2%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           +L +  S+A C   G ++++  D+     + V     +Y   +  L++Q ++ A   F  
Sbjct: 24  SLALILSVAAC---GGDKKAINDM----ESHVPPVETLYNNGIDALRDQRYALAAAEFEV 76

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
             +++P++G    + LM  +  Y   KY  A    + ++  +P S +  Y +YL  + Y 
Sbjct: 77  LQQNYPYSGYVANAQLMEGYANYLQDKYADAVQQLDRFLELHPTSADAAYAFYLRALCYY 136

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
           + + +V  DQ+ T   +  +  ++ R+  SPY + A+  V + R+ LA KE+ +GR+Y +
Sbjct: 137 EQVAEVQRDQQGTVEAMNALEEVITRFPQSPYARDAQLKVDLCRDHLAGKEMLVGRFYEE 196

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           +  Y  A+ R+Q V+ ++    H  EA+ RLVE Y+ L L D+AR   S++   YP   W
Sbjct: 197 QRNYEGAVNRYQRVVQDFQTTNHVPEALERLVEVYLDLGLTDQARRTASVLSYNYPGSKW 256

Query: 263 ARYVETLVK 271
            R+   +++
Sbjct: 257 YRFSYNMLR 265


>gi|85374273|ref|YP_458335.1| DNA uptake lipoprotein [Erythrobacter litoralis HTCC2594]
 gi|84787356|gb|ABC63538.1| DNA uptake lipoprotein [Erythrobacter litoralis HTCC2594]
          Length = 266

 Score =  125 bits (314), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 112/203 (55%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y  A   L   N   A   F++  R  P++  AR++ LMSAF  Y +  Y +A    + 
Sbjct: 46  LYASAKDRLDRGNAKLAAALFDEVERQHPYSPWARRAQLMSAFSYYVSRDYTKAIQSAQR 105

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           +++ +P +K+  Y YYL+ +SY + I DV  DQ+ T+  L  +  +  R+  + Y   AR
Sbjct: 106 FLSIHPGNKDAPYAYYLIALSYYEQISDVQRDQKVTEQALTALREVDRRFPQTEYAADAR 165

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             + +  + LA KE+EIGR+Y +  ++ AA+ RFQ V+ +Y    HA EA+ RL E+ +A
Sbjct: 166 LKMDLVNDHLAGKEMEIGRFYQRTAKWAAAVIRFQNVVDDYQTTSHAPEALYRLTESNLA 225

Query: 240 LALMDEAREVVSLIQERYPQGYW 262
           L +  EA++  +++   YP   W
Sbjct: 226 LGIPTEAKKYAAVLGANYPGSEW 248


>gi|163746142|ref|ZP_02153501.1| competence lipoprotein ComL, putative [Oceanibulbus indolifex
           HEL-45]
 gi|161380887|gb|EDQ05297.1| competence lipoprotein ComL, putative [Oceanibulbus indolifex
           HEL-45]
          Length = 288

 Score =  125 bits (314), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 111/204 (54%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           +++E+    L   N  +A  YF +  R +P++  A+++L+M AF  +    Y  + S  +
Sbjct: 49  QIFERGEYELTNNNPGEAAFYFAEIERLYPYSEWAKRALIMQAFAYHKDQDYPNSRSAAQ 108

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            +I  YP   +  Y  YL+ +SY   I +V  DQ  T   LQ +  ++E Y +S Y + A
Sbjct: 109 RFIDFYPAEDDAAYAQYLLALSYYDQIDEVGRDQGLTFQALQSLRAVIEGYPDSEYARSA 168

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
                +  + LA KE+EIGRYYL+R  Y AAI RF++V+ ++    H  EA+ RLVE+Y+
Sbjct: 169 ILKFDLAFDHLAGKEMEIGRYYLRRDHYTAAINRFRVVVEDFQTTTHTAEALHRLVESYL 228

Query: 239 ALALMDEAREVVSLIQERYPQGYW 262
           +L L  EA+   +++   Y    W
Sbjct: 229 SLGLDKEAQTAGAILGHNYRGSEW 252


>gi|254511506|ref|ZP_05123573.1| tetratricopeptide TPR_2 repeat protein [Rhodobacteraceae bacterium
           KLH11]
 gi|221535217|gb|EEE38205.1| tetratricopeptide TPR_2 repeat protein [Rhodobacteraceae bacterium
           KLH11]
          Length = 286

 Score =  125 bits (314), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 114/204 (55%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           +++ +    L +     A  YF++  R +P++  A+++L+M AF  ++   Y ++ +  +
Sbjct: 47  QIFTRGEYELSQDRSDDAAWYFSEVERLYPYSDWAKRALIMQAFSYHNDKNYAESRAAAQ 106

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            YI  YP  ++  Y  YL+ +SY   I +V  DQ  T   LQ +  ++E Y +S Y   A
Sbjct: 107 RYIDFYPTDEDAAYAQYLLALSYYDQIDEVGRDQGLTFQALQALRTVIEVYPDSEYATSA 166

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
                +  + LA KE+EIGRYYL++  + AAI RF++V+ ++    H  EA+ RL+EAY+
Sbjct: 167 VLKFDLAFDHLAGKEMEIGRYYLRQDHFTAAINRFRVVVEDFQTTSHTAEALYRLIEAYL 226

Query: 239 ALALMDEAREVVSLIQERYPQGYW 262
           AL L+DEA+   +++   Y    W
Sbjct: 227 ALGLVDEAQTAGAILGYNYQSSEW 250


>gi|114771762|ref|ZP_01449155.1| competence lipoprotein ComL, putative [alpha proteobacterium
           HTCC2255]
 gi|114547578|gb|EAU50469.1| competence lipoprotein ComL, putative [alpha proteobacterium
           HTCC2255]
          Length = 230

 Score =  125 bits (313), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 64/189 (33%), Positives = 104/189 (55%)

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
           ++A   F    R +P++  A+KSLLMSA   ++   Y+++ +  E Y+  YP   +  + 
Sbjct: 3   AEAASLFAAVERQYPYSEWAKKSLLMSAIANHNGAFYEESRADAERYLDFYPADVDAAHA 62

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
            YL+ +SY   I +V  DQ  T   LQ    ++ERY NS Y   +     +  + LA  E
Sbjct: 63  QYLIALSYYDQIDNVSRDQSVTFSALQAFRTVIERYPNSEYTSPSLLKFDLSLDHLAGAE 122

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +E+GRYYLKRG + AAI RF++V+  +    H  EA+ RLVE+Y++L L+  A+   +++
Sbjct: 123 MEVGRYYLKRGHFGAAISRFRVVVEEFETTSHTPEALHRLVESYLSLGLIANAQTTGAIL 182

Query: 254 QERYPQGYW 262
              +    W
Sbjct: 183 GHNFQASDW 191


>gi|157828109|ref|YP_001494351.1| hypothetical protein A1G_01315 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165932811|ref|YP_001649600.1| ComL family lipoprotein [Rickettsia rickettsii str. Iowa]
 gi|157800590|gb|ABV75843.1| hypothetical protein A1G_01315 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165907898|gb|ABY72194.1| lipoprotein, ComL family [Rickettsia rickettsii str. Iowa]
          Length = 251

 Score =  125 bits (313), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 125/233 (53%), Gaps = 7/233 (3%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
            +++S D+ +   T       +Y + +  L+++ +  A E F +     P   +  ++ L
Sbjct: 22  NKKTSDDIVVPIAT-------LYNEGITLLEKKKYKNAAEEFGRVLYQHPGNEMTPQAEL 74

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
           M A+  + A +Y++A  + + +IT +P + ++ Y YYL  +SY  +I DV +DQ  T L 
Sbjct: 75  MQAYSLFLAAQYEEAVDVLDMFITLHPANVDIAYAYYLKALSYYMLISDVNHDQSRTFLA 134

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
                 ++ ++ N+ Y   +   + +  + LA KE+ +GR+YLK+   +AAI RF+ V+ 
Sbjct: 135 KDSFEDVIAKFPNTKYAIDSSLKIDLVNDHLAGKEMMVGRFYLKKKNPMAAINRFEEVID 194

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           NY    H+ EA+ RL E+Y+ L L DEA++  S++   YP   W  Y   LV+
Sbjct: 195 NYQTTSHSVEALYRLAESYMILGLPDEAKKYASVLGYNYPDSQWYSYAYRLVQ 247


>gi|162148968|ref|YP_001603429.1| hypothetical protein GDI_3198 [Gluconacetobacter diazotrophicus PAl
           5]
 gi|161787545|emb|CAP57141.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 319

 Score =  124 bits (312), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 128/249 (51%), Gaps = 7/249 (2%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           +L +  ++A C   G ++++  D+     + V     +Y   +  L++Q ++ A   F  
Sbjct: 24  SLALILAVAAC---GGDKKAINDM----ESHVPPVETLYNNGIDALRDQRYALAAAEFEV 76

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
             +++P++G    + LM  +  Y   KY  A    + ++  +P S +  Y +YL  + Y 
Sbjct: 77  LQQNYPYSGYVANAQLMEGYANYLQDKYADAVQQLDRFLELHPTSADAAYAFYLRALCYY 136

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
           + + +V  DQ+ T   +  +  ++ R+  SPY + A+  V + R+ LA KE+ +GR+Y +
Sbjct: 137 EQVAEVQRDQQGTVEAMNALEEVITRFPQSPYARDAQLKVDLCRDHLAGKEMLVGRFYEE 196

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           +  Y  A+ R+Q V+ ++    H  EA+ RLVE Y+ L L D+AR   S++   YP   W
Sbjct: 197 QRNYEGAVNRYQRVVQDFQTTNHVPEALERLVEVYLDLGLTDQARRTASVLSYNYPGSKW 256

Query: 263 ARYVETLVK 271
            R+   +++
Sbjct: 257 YRFSYNMLR 265


>gi|329115585|ref|ZP_08244307.1| UPF0169 lipoprotein [Acetobacter pomorum DM001]
 gi|326695013|gb|EGE46732.1| UPF0169 lipoprotein [Acetobacter pomorum DM001]
          Length = 345

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 124/259 (47%), Gaps = 8/259 (3%)

Query: 9   ICIFEAWAYQLYKFALTI--FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVL 66
           ICI       +    L++    S+A C L    ++      L     +     +Y   + 
Sbjct: 4   ICIKPQLLRHVLPHVLSVALLTSLAGCGLFNENKK------LPPAPKIAAPETLYNNGID 57

Query: 67  FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
            L+ + ++ A   F    +++P++G    + LM  +  Y  GKY +A      +I+ +P 
Sbjct: 58  ALRTRRYALAASEFETLQQNYPYSGYIANAQLMEGYAYYLKGKYPEAVQQLNRFISLHPT 117

Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
           S +  Y YYL  + + + I DV  DQ+ T   +  +  ++ R+  S Y + A+  + + R
Sbjct: 118 SSDSAYAYYLRALCFYEQIADVQRDQQGTAESMDALEEVITRFPQSKYARDAQLKIDLCR 177

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
           + LA KE+ +GRYY +   Y  AI R+Q V+ ++    H  EA+ R+VE Y+ L L D+A
Sbjct: 178 DHLAGKEMLVGRYYQREKNYEGAINRYQRVVQDFQTTNHVPEALERMVEVYLDLGLTDQA 237

Query: 247 REVVSLIQERYPQGYWARY 265
           R+   ++   YP   W RY
Sbjct: 238 RKSAIVLGYNYPGSKWYRY 256


>gi|15604057|ref|NP_220572.1| hypothetical protein RP183 [Rickettsia prowazekii str. Madrid E]
 gi|18203676|sp|Q9ZDY1|Y183_RICPR RecName: Full=UPF0169 lipoprotein RP183; Flags: Precursor
 gi|3860748|emb|CAA14649.1| unknown [Rickettsia prowazekii]
 gi|292571778|gb|ADE29693.1| DNA uptake lipoprotein [Rickettsia prowazekii Rp22]
          Length = 251

 Score =  124 bits (311), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 117/212 (55%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y + ++ L ++ + KA E F +     P   +  ++ LM A+  + A +Y++A  +   
Sbjct: 36  LYNEGIILLDKKKYKKAAEEFGKIFYQHPGNEMTPQAELMQAYSLFLAAQYEEAVDILNM 95

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           +I  +P + ++ Y YYL  +SY  +I DV +DQ  T L       ++ ++ N+ Y   + 
Sbjct: 96  FINLHPANIDIAYAYYLKALSYYMLISDVNHDQSRTFLSKDSFEDVITKFPNTKYAIDSS 155

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             + +  + LA KE+ IGR+YLK+   +AAI RF+ V+ NY    H+ EA+ RLVE+Y+ 
Sbjct: 156 LKIDLVNDHLAGKEMMIGRFYLKKKNPMAAINRFEEVIDNYQTTYHSVEALYRLVESYMM 215

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           L L DEA++  S++   YP   W  Y   LVK
Sbjct: 216 LGLHDEAKKYTSVLGYNYPNSKWYSYAYRLVK 247


>gi|163741561|ref|ZP_02148952.1| competence lipoprotein ComL, putative [Phaeobacter gallaeciensis
           2.10]
 gi|161385295|gb|EDQ09673.1| competence lipoprotein ComL, putative [Phaeobacter gallaeciensis
           2.10]
          Length = 282

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 114/204 (55%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++YE+    ++      A  YF++  R +P++  A+++L+M A+  +    Y+ + +  +
Sbjct: 43  QIYERGEFEMERNRTEDAAFYFSEIERLYPYSSWAKQALIMQAYAYHLGRDYEDSRAAAQ 102

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            YI  YP  ++  Y  YL+ +SY   I +V  DQ  T   LQ +  ++E Y +S Y   A
Sbjct: 103 RYIDFYPTEEDAAYAQYLLALSYYDQIDEVGRDQGLTFQALQSLRTVIEVYPDSEYASSA 162

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
                +  + LA KE+EIGRYYL++  Y +A+ RF++V+ ++    H  EA+ RLVEAY+
Sbjct: 163 ILKFDLAFDHLAGKEMEIGRYYLRKEHYTSAVNRFRVVVEDFQTTTHTAEALHRLVEAYL 222

Query: 239 ALALMDEAREVVSLIQERYPQGYW 262
           +L L++EA+   +++   Y    W
Sbjct: 223 SLGLVNEAQTAGAILGHNYQSTEW 246


>gi|258542978|ref|YP_003188411.1| hypothetical protein APA01_19070 [Acetobacter pasteurianus IFO
           3283-01]
 gi|256634056|dbj|BAI00032.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
 gi|256637116|dbj|BAI03085.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
 gi|256640168|dbj|BAI06130.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
 gi|256643225|dbj|BAI09180.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
 gi|256646280|dbj|BAI12228.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
 gi|256649333|dbj|BAI15274.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
 gi|256652319|dbj|BAI18253.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256655377|dbj|BAI21304.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
          Length = 345

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 120/245 (48%), Gaps = 6/245 (2%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
            ++ +  S+A C L    ++      L     +     +Y   +  L+ + ++ A   F 
Sbjct: 19  LSVALLTSLAGCGLFNENKK------LPPAPKIAAPETLYNNGIDALRTRRYALAASEFE 72

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
              +++P++G    + LM  +  Y  GKY +A      +I+ +P S +  Y YYL  + +
Sbjct: 73  TLQQNYPYSGYIANAQLMEGYAYYLKGKYPEAVQQLNRFISLHPTSSDSAYAYYLRALCF 132

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            + I DV  DQ+ T   +  +  ++ R+  S Y + A+  + + R+ LA KE+ +GRYY 
Sbjct: 133 YEQIADVQRDQQGTAESMDALEEVITRFPQSKYARDAQLKIDLCRDHLAGKEMLVGRYYQ 192

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +   Y  AI R+Q V+ ++    H  EA+ R+VE Y+ L L D+AR+   ++   YP   
Sbjct: 193 REKNYEGAINRYQRVVQDFQTTNHVPEALERMVEVYLDLGLTDQARKSAIVLGYNYPGSK 252

Query: 262 WARYV 266
           W RY 
Sbjct: 253 WYRYA 257


>gi|229586426|ref|YP_002844927.1| DNA uptake lipoprotein [Rickettsia africae ESF-5]
 gi|228021476|gb|ACP53184.1| DNA uptake lipoprotein [Rickettsia africae ESF-5]
          Length = 251

 Score =  122 bits (307), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 124/233 (53%), Gaps = 7/233 (3%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
            +++S D+ +   T       +Y + +  L+++ +  A E F +     P   +  ++ L
Sbjct: 22  NKKNSDDIVVPIAT-------LYNEGITLLEKKKYKNAAEEFGRVLYQHPGNEMTPQAEL 74

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
           M A+  + A +Y++A  + + +I  +P + ++ Y YYL  +SY  +I DV +DQ  T L 
Sbjct: 75  MQAYSLFLAAQYEEAVDVLDMFIKLHPANVDIAYAYYLKALSYYMLISDVNHDQSRTFLA 134

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
                 ++ ++ N+ Y   +   + +  + LA KE+ +GR+YLK+   +AAI RF+ V+ 
Sbjct: 135 KDSFEDVIAKFPNTKYAIDSSLKIDLVNDHLAGKEMTVGRFYLKKKNPMAAINRFEEVID 194

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           NY    H+ EA+ RL E+Y+ L L DEA++  S++   YP   W  Y   LV+
Sbjct: 195 NYQTTSHSVEALYRLAESYMMLGLPDEAKKYASVLGYNYPDSQWYSYAYRLVQ 247


>gi|238650459|ref|YP_002916311.1| ComL family lipoprotein [Rickettsia peacockii str. Rustic]
 gi|238624557|gb|ACR47263.1| ComL family lipoprotein [Rickettsia peacockii str. Rustic]
          Length = 251

 Score =  122 bits (307), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 124/233 (53%), Gaps = 7/233 (3%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
            +++S D+ +   T       +Y + +  L+++ +  A E F +     P   +  ++ L
Sbjct: 22  NKKTSDDIVVPIAT-------LYNEGITLLEKKKYKNAAEEFGRVLYQHPGNEMTPQAEL 74

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
           M A+  + A +Y++A  + + +I  +P + ++ Y YYL  +SY  +I DV +DQ  T L 
Sbjct: 75  MQAYSLFLAAQYEEAVDVLDMFIKLHPANVDIAYAYYLKALSYYMLISDVNHDQSRTFLA 134

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
                 ++ ++ N+ Y   +   + +  + LA KE+ +GR+YLK+   +AAI RF+ V+ 
Sbjct: 135 KDSFEDVIAKFPNTKYAIDSSLKIDLVNDHLAGKEMMVGRFYLKKKNPMAAINRFEEVID 194

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           NY    H+ EA+ RL E+Y+ L L DEA++  S++   YP   W  Y   LV+
Sbjct: 195 NYQTTSHSVEALYRLAESYMILGLPDEAKKYASVLGYNYPDSQWYSYAYRLVQ 247


>gi|15892153|ref|NP_359867.1| hypothetical protein RC0230 [Rickettsia conorii str. Malish 7]
 gi|15619283|gb|AAL02768.1| unknown [Rickettsia conorii str. Malish 7]
          Length = 251

 Score =  122 bits (307), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 124/233 (53%), Gaps = 7/233 (3%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
            +++S D+ +   T       +Y + +  L+++ +  A E F +     P   +  ++ L
Sbjct: 22  NKKNSDDIVVPIAT-------LYNEGITLLEKKKYKNAAEEFGRVLYQHPGNEMTPQAEL 74

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
           M A+  + A +Y++A  + + +I  +P + ++ Y YYL  +SY  +I DV +DQ  T L 
Sbjct: 75  MQAYSLFLAAQYEEAVDVLDMFIKLHPANVDIAYAYYLKALSYYMLISDVNHDQSRTFLA 134

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
                 ++ ++ N+ Y   +   + +  + LA KE+ +GR+YLK+   +AAI RF+ V+ 
Sbjct: 135 KDSFEDVIAKFPNTKYAIDSSLKIDLVNDHLAGKEMMVGRFYLKKKNPMAAINRFEEVID 194

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           NY    H+ EA+ RL E+Y+ L L DEA++  S++   YP   W  Y   LV+
Sbjct: 195 NYQTTSHSVEALYRLAESYMMLGLSDEAKKYASVLGYNYPDSQWYSYAYRLVQ 247


>gi|34580817|ref|ZP_00142297.1| hypothetical protein [Rickettsia sibirica 246]
 gi|28262202|gb|EAA25706.1| unknown [Rickettsia sibirica 246]
          Length = 251

 Score =  122 bits (306), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 124/233 (53%), Gaps = 7/233 (3%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
            +++S D+ +   T       +Y + +  L+++ +  A E F +     P   +  ++ L
Sbjct: 22  NKKNSDDIVVPIAT-------LYNEGITLLEKKKYKNAAEEFGRVLYQHPGNEMTPQAEL 74

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
           M A+  + A +Y++A  + + +I  +P + ++ Y YYL  +SY  +I DV +DQ  T L 
Sbjct: 75  MQAYSLFLAAQYEEAVDVLDMFIKLHPANVDIAYAYYLKALSYYMLISDVNHDQSRTFLA 134

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
                 ++ ++ N+ Y   +   + +  + LA KE+ +GR+YLK+   +AAI RF+ V+ 
Sbjct: 135 KDSFEDVIAKFPNTKYAIDSSLKIDLVNDHLAGKEMMVGRFYLKKKNPMAAINRFEEVID 194

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           NY    H+ EA+ RL E+Y+ L L DEA++  S++   YP   W  Y   LV+
Sbjct: 195 NYQTTSHSVEALYRLAESYMMLGLPDEAKKYASVLGYNYPDSQWYSYAYRLVQ 247


>gi|67459480|ref|YP_247104.1| hypothetical protein RF_1088 [Rickettsia felis URRWXCal2]
 gi|67005013|gb|AAY61939.1| unknown [Rickettsia felis URRWXCal2]
          Length = 251

 Score =  122 bits (306), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 131/248 (52%), Gaps = 7/248 (2%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L+I F I +       +++S D+ +   T       +Y + V  L+++ + KA E F + 
Sbjct: 7   LSILFIIGLSLSGCKSKKNSDDIVVPIPT-------LYNEGVSLLEKKKYKKAAEEFGRV 59

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
               P   +  ++ LM  +  + A +Y++A  + + +I  +P + ++ Y YYL  +SY  
Sbjct: 60  FYQHPGNEMTPQAELMQGYSLFLAAQYEEAVDVLDMFINLHPANVDIAYAYYLKALSYYM 119

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
           +I DV +DQ  T L       ++ ++ N+ Y   +   + +  + LA KE+ +GR+YLK+
Sbjct: 120 LISDVNHDQSRTFLAKDSFEDVIGKFPNTKYAIDSSLKIDLVNDHLAGKEMMVGRFYLKK 179

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
              +AAI RF+ V+ NY    H+ EA+ RLVE+Y+ L L DEA++  S++   YP   W 
Sbjct: 180 KNPMAAINRFEEVIDNYQTTSHSVEALYRLVESYMMLGLADEAKKYASVLGYNYPDSQWY 239

Query: 264 RYVETLVK 271
            Y   LVK
Sbjct: 240 SYAYKLVK 247


>gi|88606744|ref|YP_505635.1| putative competence lipoprotein ComL [Anaplasma phagocytophilum HZ]
 gi|88597807|gb|ABD43277.1| putative competence lipoprotein ComL [Anaplasma phagocytophilum HZ]
          Length = 233

 Score =  122 bits (306), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 72/204 (35%), Positives = 110/204 (53%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
           S  V+ D   D      +Y++A +  +++ +  A    N+    +PF+ VA    LMSA 
Sbjct: 18  SGSVHADEAIDEGGVHGLYDRASVLFEKKKYKDAIAILNKIEALYPFSQVAIDGSLMSAE 77

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y  G Y++AA+L E YI  YP S  +DY YY+   S   ++ D+  D    K +L+Y 
Sbjct: 78  ANYELGNYREAATLVEGYIGIYPNSPVIDYAYYIRIASKYMLVPDLGLDDSIAKEVLEYA 137

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
           +  V+ +  S Y+   +  +   RN +AAKE   GR+Y+KRGEY+AAI RF  ++  Y D
Sbjct: 138 AEFVKMFPESEYLAPVQEKLGHLRNHVAAKEFLTGRFYMKRGEYIAAIKRFSTLVREYPD 197

Query: 223 AEHAEEAMARLVEAYVALALMDEA 246
           + + +E M RL EAY A+   D A
Sbjct: 198 SAYFQEGMYRLSEAYSAIGDKDTA 221


>gi|89067817|ref|ZP_01155261.1| competence lipoprotein ComL, putative [Oceanicola granulosus
           HTCC2516]
 gi|89046415|gb|EAR52471.1| competence lipoprotein ComL, putative [Oceanicola granulosus
           HTCC2516]
          Length = 284

 Score =  121 bits (304), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 110/204 (53%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E++E+    L       A  YF +  R +P++  A+++L+M A   +    Y  A +  +
Sbjct: 45  EIFERGEYELARGQADDAAFYFGEIERLYPYSEFAKRALIMQAAAYHQDRDYPNARAAAQ 104

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            +I  YP   +  Y  YL+ +SY   I ++  DQ  T   LQ +  ++E Y +S Y + A
Sbjct: 105 RFIDFYPADPDAAYAQYLLALSYYDQIDEIGRDQGLTFQALQALRTVIEVYPDSEYARAA 164

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
                +  + LAAKE+E+GR+YLKR  + AA+ RF++V+ ++    H  EA+ RLVEAY+
Sbjct: 165 IPKFDLAFDHLAAKEMEVGRFYLKRDHFAAAVNRFRVVVEDFQTTAHTAEALHRLVEAYL 224

Query: 239 ALALMDEAREVVSLIQERYPQGYW 262
           +L L DEA+   +++   Y    W
Sbjct: 225 SLGLTDEAQTAGAILGHNYRSTEW 248


>gi|57239503|ref|YP_180639.1| hypothetical protein Erum7760 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58579484|ref|YP_197696.1| hypothetical protein ERWE_CDS_08200 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|57161582|emb|CAH58510.1| putative exported lipoprotein [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58418110|emb|CAI27314.1| Conserved hypothetical protein [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 250

 Score =  121 bits (303), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 125/239 (52%), Gaps = 8/239 (3%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           ++  F ++  FL       S++  + SV + R    +YE A+     + +  A +   + 
Sbjct: 14  ISCLFIVSCAFL-------SKERVVKSVEN-RTADGIYESALKKSSNKQYKDAVKDLEEI 65

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +PF+ VA K+ +M +F+ Y    Y +AA+  E+YI  YP+S+++D  YYL  M+   
Sbjct: 66  DSLYPFSPVAIKARIMMSFLNYELENYSRAATYAEDYINLYPDSEDIDVAYYLRIMANYM 125

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
            I D+  DQ     + + +   V  + NS Y++     + +    +AAKE  IG++YL+R
Sbjct: 126 QINDIDRDQSVAYKVSELLDEFVRLFPNSQYLEEVNLRLNMVHEHIAAKEFSIGKFYLQR 185

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           GEYVAAI RF  +L  Y +  +  E++ R  EAY++L   D  ++ +SL+QE      W
Sbjct: 186 GEYVAAIRRFSTILKRYKNTRYFPESVYRTAEAYLSLGDKDAYKKYISLLQECCVGSEW 244


>gi|114327085|ref|YP_744242.1| ComL family lipoprotein [Granulibacter bethesdensis CGDNIH1]
 gi|114315259|gb|ABI61319.1| lipoprotein, ComL family [Granulibacter bethesdensis CGDNIH1]
          Length = 317

 Score =  121 bits (303), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 67/204 (32%), Positives = 110/204 (53%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y   V  +++  ++ A + F+   + +P++  A  + LM  + QY   KY  A    +
Sbjct: 76  ELYNTGVDAMQDHRYTTAAQQFDAVQQYYPYSSWAANAQLMQGYSQYLEHKYMDAIGSLD 135

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            +I  +P  K++ Y YYL  +S+ + I D+  DQ+ T+  +  +  +V R+ +S Y + A
Sbjct: 136 RFIQLHPTHKDIAYAYYLRALSFYEQIADIQRDQKGTEDAMTALQEVVSRFPDSGYARDA 195

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
           R  + + R+ LA KE+EIGRYY +   Y AAI RFQ V+  Y    H  EA+ RL E Y+
Sbjct: 196 RLKIDLCRDHLAGKEMEIGRYYEREHLYAAAINRFQTVVKEYQTTNHVPEALHRLTELYL 255

Query: 239 ALALMDEAREVVSLIQERYPQGYW 262
            L L  +AR   +++   YP   W
Sbjct: 256 LLGLRSDARRTAAVLGHNYPGSSW 279


>gi|58617537|ref|YP_196736.1| hypothetical protein ERGA_CDS_08100 [Ehrlichia ruminantium str.
           Gardel]
 gi|58417149|emb|CAI28262.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Gardel]
          Length = 250

 Score =  121 bits (303), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 125/239 (52%), Gaps = 8/239 (3%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           ++  F ++  FL       S++  + SV + R    +YE A+     + +  A +   + 
Sbjct: 14  ISCLFIVSCVFL-------SKERVVKSVEN-RTADGIYESALKKSSNKQYKDAVKDLEEI 65

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +PF+ VA K+ +M +F+ Y    Y +AA+  E+YI  YP+S+++D  YYL  M+   
Sbjct: 66  DSLYPFSPVAIKARIMMSFLNYELENYSRAATYAEDYINLYPDSEDIDVAYYLRIMANYM 125

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
            I D+  DQ     + + +   V  + NS Y++     + +    +AAKE  IG++YL+R
Sbjct: 126 QINDIDRDQSVAYKVSELLDEFVRLFPNSQYLEEVNLRLNMVHEHIAAKEFSIGKFYLQR 185

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           GEYVAAI RF  +L  Y +  +  E++ R  EAY++L   D  ++ +SL+QE      W
Sbjct: 186 GEYVAAIRRFSTILKRYKNTRYFPESVYRTAEAYLSLGDKDAYKKYISLLQECCVGSEW 244


>gi|239948179|ref|ZP_04699932.1| DNA uptake lipoprotein [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239922455|gb|EER22479.1| DNA uptake lipoprotein [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 249

 Score =  120 bits (302), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 129/242 (53%), Gaps = 7/242 (2%)

Query: 30  IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
           I + F     +++S D+ +   T       +Y + V  L+++ + KA E F +     P 
Sbjct: 13  IGLVFSGCKSKKNSDDIVVPIPT-------LYNEGVTLLEKKKYKKAAEEFGRVFYQHPG 65

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
             +  ++ LM A+  + A +Y++A  + + +I  +P + ++ Y YYL  +SY  +I DV 
Sbjct: 66  NEMTPQAELMQAYSLFLAAQYEEAVDVLDMFINLHPANVDITYAYYLKALSYYMLISDVN 125

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
           +DQ  T L       ++ ++ N+ Y   +   + +  + LA KE+ +GR+YLK+   +AA
Sbjct: 126 HDQSRTFLAKDSFEDVIAKFPNTKYAIDSSLKIDLVNDHLAGKEMMVGRFYLKKKNPMAA 185

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
           I RF+ V+ NY    H+ EA+ RLVE+Y+ L L DEA++  S++   YP   W  Y   L
Sbjct: 186 INRFEEVIDNYQTTSHSVEALYRLVESYMMLGLPDEAKKYASVLGYNYPDSQWYSYAYRL 245

Query: 270 VK 271
           VK
Sbjct: 246 VK 247


>gi|254488543|ref|ZP_05101748.1| competence lipoprotein ComL [Roseobacter sp. GAI101]
 gi|214045412|gb|EEB86050.1| competence lipoprotein ComL [Roseobacter sp. GAI101]
          Length = 289

 Score =  119 bits (298), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 117/204 (57%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           +++E+    L  +  ++A EYF++  R +P++  A+++L+M AF  +    Y  + S  +
Sbjct: 50  QIFERGEFELNRKRPAEAAEYFSEIERLYPYSEWAKRALIMQAFAFHQDQDYPNSRSAAQ 109

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            +I  +P+  +  Y  YL+ +SY   I +V  DQ  T   LQ + +++E Y +S Y + A
Sbjct: 110 RFIDFFPDDDDAAYASYLLALSYYDQIDEVGRDQGLTFQALQSLRQVIENYPDSEYARAA 169

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
                +  + LA KE+E+GRYYL+R  Y A+I RF++V+ ++    H  EA+ RLVEAY+
Sbjct: 170 VLKFDLAFDHLAGKEMEVGRYYLRRKHYTASINRFRVVVEDFQTTSHTAEALHRLVEAYL 229

Query: 239 ALALMDEAREVVSLIQERYPQGYW 262
           +L L +EA+   +++   Y    W
Sbjct: 230 SLGLTNEAQTAGAILGYNYQSTEW 253


>gi|85708862|ref|ZP_01039928.1| DNA uptake lipoprotein [Erythrobacter sp. NAP1]
 gi|85690396|gb|EAQ30399.1| DNA uptake lipoprotein [Erythrobacter sp. NAP1]
          Length = 266

 Score =  118 bits (295), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 110/203 (54%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y +A   L   N + A   F++  R  P++  AR++ LMSAF  Y A  Y +A    + 
Sbjct: 46  LYAEAQRRLDRGNTTLAAALFDEVERQHPYSPWARRAQLMSAFCYYIARDYNKAIQNSQR 105

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           +++ +P +K+  Y YYL+ +SY + I DV  DQ  T+     +  +  R+  + Y   AR
Sbjct: 106 FLSIHPGNKDAPYAYYLIALSYYEQISDVNRDQSITEQAQIALREVNRRFPQTEYAADAR 165

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             + +  + LA KE+EIGR+Y + G ++AA  RF+ V+  Y    H  EA+ RL E+ +A
Sbjct: 166 LKLDLVADHLAGKEMEIGRFYQRSGRWLAAQLRFRNVVETYETTSHTPEALYRLTESSLA 225

Query: 240 LALMDEAREVVSLIQERYPQGYW 262
           L + +EA +  +++   YP   W
Sbjct: 226 LGIREEAVKYAAVLGANYPGTEW 248


>gi|330994414|ref|ZP_08318340.1| UPF0169 lipoprotein [Gluconacetobacter sp. SXCC-1]
 gi|330995012|ref|ZP_08318932.1| UPF0169 lipoprotein [Gluconacetobacter sp. SXCC-1]
 gi|329757925|gb|EGG74449.1| UPF0169 lipoprotein [Gluconacetobacter sp. SXCC-1]
 gi|329758540|gb|EGG75058.1| UPF0169 lipoprotein [Gluconacetobacter sp. SXCC-1]
          Length = 294

 Score =  117 bits (294), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 108/203 (53%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y   V  L+   +  +   F+   R++P++     + LM  +  Y   KY +A    + 
Sbjct: 55  LYNNGVDALRSDRYLLSVNQFDTLQRNYPYSQYTANAQLMEGYANYLLNKYPEAVQQLDR 114

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           ++  +P S +  Y +YL  + Y + + DV  DQ+ T   +  +  ++ R+  SPY + A+
Sbjct: 115 FLELHPTSADAAYAFYLRALCYYEQVADVQRDQQGTIEAMDALEEVITRFPQSPYARDAQ 174

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             + + R+ LA KE+ +GR+Y ++ +Y AA  R+Q V+ ++    H  EA+ RLVE Y+ 
Sbjct: 175 LKIDLCRDHLAGKEMLVGRWYQQQNDYPAAAGRYQRVVQDFQTTNHVPEALERLVEVYLD 234

Query: 240 LALMDEAREVVSLIQERYPQGYW 262
           + L+++AR+  +++   YP   W
Sbjct: 235 MGLLEQARKTGAVLAYNYPSSKW 257


>gi|294085893|ref|YP_003552653.1| competence lipoprotein ComL [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292665468|gb|ADE40569.1| competence lipoprotein ComL, putative [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 270

 Score =  117 bits (293), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 113/220 (51%), Gaps = 5/220 (2%)

Query: 50  SVTDVRYQRE-----VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           S T+V  Q E     +Y +A+      N  KA   F +  R  P++ +A ++ LM+A+  
Sbjct: 21  SSTEVEEQVERPVEQLYNEALNTALAGNAKKAAPKFEEVERQHPYSSLAVRAQLMAAWAF 80

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y    Y +A +  + ++   P  + V+Y YYL  + Y + I DV  D   TKL +Q    
Sbjct: 81  YQDNNYPRAIAALDRFVELNPADERVEYAYYLKALCYYEQIVDVQRDAEMTKLAMQAFEE 140

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V R+ +  Y + A   + + R+ LA KE+ +GR+YL +  Y AA+ RF+ V+ +Y    
Sbjct: 141 LVRRFPDGDYFRDATLKIDLTRSHLAGKEMAVGRFYLSKQHYGAALRRFENVVTDYDTTN 200

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
              EA+ R+ EAY++L L  EA  V  +    YP+  W +
Sbjct: 201 QVPEALYRMTEAYLSLGLASEANRVEEVAVYNYPKSIWTQ 240


>gi|302383769|ref|YP_003819592.1| outer membrane assembly lipoprotein YfiO [Brevundimonas
           subvibrioides ATCC 15264]
 gi|302194397|gb|ADL01969.1| outer membrane assembly lipoprotein YfiO [Brevundimonas
           subvibrioides ATCC 15264]
          Length = 286

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 2/205 (0%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y      L+   +S A +YF +  R  P++  +R+++LM  +  Y  G Y+++ +  + 
Sbjct: 49  LYNTGYTRLQSNRWSDAVDYFQEVERQHPYSEWSRRAILMQVYAHYQNGSYEESIAAADR 108

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           +I+ +P S +  Y +Y+    + + I DV  DQ   +  L  +  +  RY  S Y   A 
Sbjct: 109 FISLFPGSPSAAYAFYMRATCHFEQIVDVGRDQNQAQQALDGLRDVARRYPGSSYATDAT 168

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN--YSDAEHAEEAMARLVEAY 237
             + +  +QLA KE+ IGRYY +    +AAI R++ V+ N  Y    H  EA+ RLVE Y
Sbjct: 169 VKIDMVNDQLAGKEMSIGRYYQRANLPLAAIGRYKAVIDNEAYQRTSHTPEALYRLVEVY 228

Query: 238 VALALMDEAREVVSLIQERYPQGYW 262
           ++L L DEA    S++   YP   W
Sbjct: 229 LSLGLKDEAERNGSVLGFNYPGSPW 253


>gi|58038651|ref|YP_190615.1| lipoprotein [Gluconobacter oxydans 621H]
 gi|58001065|gb|AAW59959.1| Hypothetical lipoprotein [Gluconobacter oxydans 621H]
          Length = 299

 Score =  116 bits (291), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 120/244 (49%), Gaps = 6/244 (2%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           A++ F  ++ C L   + +        ++        +Y   +  L   ++  A   F  
Sbjct: 24  AVSGFLLLSGCSLFSHQHEKP------AIPKTADAETLYNYGIDALHTGHYELAGGEFEL 77

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
             +++P++G    + LM  +  Y  G+Y  +    E Y+  +P S +  Y +YL  + Y 
Sbjct: 78  LQQNYPYSGFTGNAELMEGYAYYLQGEYALSVQQLERYLQLHPTSPDAAYAFYLRALCYY 137

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
           + I +V  DQ+ T   L  +  ++ R+  + Y + A+  + + R+ LA KE+ +GR+Y +
Sbjct: 138 EQIANVERDQQGTVEALDALEEVITRFPQTSYARDAQLKIDLCRDHLAGKEMLVGRWYQQ 197

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           +  Y AA+ R+Q V+ +Y    H  EA+ RLVE Y+AL L D+A +  +++   YP   W
Sbjct: 198 QRNYEAAMTRYQRVVQDYQTTNHVAEALERLVEVYLALGLKDQAHQTAAVLGYNYPDSQW 257

Query: 263 ARYV 266
            RY 
Sbjct: 258 YRYA 261


>gi|157964248|ref|YP_001499072.1| DNA uptake lipoprotein [Rickettsia massiliae MTU5]
 gi|157844024|gb|ABV84525.1| DNA uptake lipoprotein [Rickettsia massiliae MTU5]
          Length = 251

 Score =  115 bits (289), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 117/212 (55%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y + +  L+++ + KA E F +     P   +  ++ LM A+  + A +Y++A  + + 
Sbjct: 36  LYNEGITLLEKKKYKKAAEEFGRVFYQHPGNEMTPQAELMQAYSLFLAAQYEEAVDVLDM 95

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           +I  +P + ++ Y YYL  +SY  +I DV +DQ  T L       ++ ++ N+ Y   + 
Sbjct: 96  FINLHPANVDIAYAYYLKALSYYMLISDVNHDQSRTFLAKDSFEDVIAKFPNTKYAIDSS 155

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             + +  + LA KE+ +GR+YLK+   +AAI RF+ V+ NY    H+ EA+ RL E+Y+ 
Sbjct: 156 LKIDLVNDHLAGKEMMVGRFYLKKKNPMAAINRFEEVIDNYQTTSHSVEALYRLAESYMM 215

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           L L DEA++  S++   YP   W  Y   LV+
Sbjct: 216 LGLPDEAKKYASVLGYNYPDSQWYSYAYRLVQ 247


>gi|254440813|ref|ZP_05054306.1| outer membrane assembly lipoprotein YfiO [Octadecabacter
           antarcticus 307]
 gi|198250891|gb|EDY75206.1| outer membrane assembly lipoprotein YfiO [Octadecabacter
           antarcticus 307]
          Length = 246

 Score =  115 bits (288), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 111/209 (53%), Gaps = 3/209 (1%)

Query: 30  IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
           I++  L G     SR        D    ++++E+    L+      A  +F +  R +P+
Sbjct: 2   ISLGLLAGCNSFDSRAA---GALDTFSAQQIFERGEFELESGQADDAAFFFGEIERLYPY 58

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +  A+++L+M AF  +    Y  + +  + YI  YP  ++  Y  YL+ +SY   I ++ 
Sbjct: 59  SEWAKRALIMQAFSYHRDTDYPNSRAAAQRYIDFYPVDEDAAYAQYLLALSYYDQIDEIG 118

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
            DQ  T   LQ +  ++ERY +S Y + +     +  + LAAKE+EIGRYYLKR  + A+
Sbjct: 119 RDQGLTFQALQALRVVIERYPDSEYAQSSVLKFDLAFDHLAAKEMEIGRYYLKRDHFAAS 178

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYV 238
           I RF++V+ ++    H  EA+ RLVE+Y+
Sbjct: 179 INRFRIVVEDFQTTSHTPEALHRLVESYL 207


>gi|296116445|ref|ZP_06835059.1| hypothetical protein GXY_11614 [Gluconacetobacter hansenii ATCC
           23769]
 gi|295977038|gb|EFG83802.1| hypothetical protein GXY_11614 [Gluconacetobacter hansenii ATCC
           23769]
          Length = 292

 Score =  115 bits (287), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 108/203 (53%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y   V  L+   +  A   F+   R++P++     + LM  +  Y   KY +A    + 
Sbjct: 53  LYNHGVDALRTNRYVLATIQFDVLQRNYPYSQYTANAQLMEGYSDYLQSKYPEAVQQLDR 112

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           ++  +P S +  Y +YL  + Y + + DV  DQ+ T   +  +  ++ R+  +PY + A+
Sbjct: 113 FLELHPTSSDAAYAFYLRALCYYEQVADVQRDQQGTIESMDALEEVITRFPQTPYARDAQ 172

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             + + R+ LA KE+ +GR+Y ++  Y AA+ R+Q V+ ++    H  EA+ RLVE Y+ 
Sbjct: 173 LKIDLCRDHLAGKEMLVGRFYQEQRNYQAAVNRYQRVVQDFQTTNHVPEALERLVEVYLD 232

Query: 240 LALMDEAREVVSLIQERYPQGYW 262
           L L+++AR+  +++   YP   W
Sbjct: 233 LGLLEQARKTGAVLAYNYPDSKW 255


>gi|269958518|ref|YP_003328305.1| putative DNA uptake lipoprotein ComL [Anaplasma centrale str.
           Israel]
 gi|269848347|gb|ACZ48991.1| putative DNA uptake lipoprotein ComL [Anaplasma centrale str.
           Israel]
          Length = 290

 Score =  112 bits (281), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 104/202 (51%), Gaps = 2/202 (0%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            ++YE  +         KA   F++    +PF+ +A    L++A   Y  G Y +AASL 
Sbjct: 34  HKLYEDGLRLFHSGQHKKAVAIFDKIEALYPFSQMAIDGSLVAAVSHYELGNYAEAASLA 93

Query: 118 EEYITQYPESKNVDYVYYL-VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
           E YI  YP SKN+DY YY+ V   Y Q + D+  DQ     +    S  V  + NS Y+ 
Sbjct: 94  ESYIDAYPSSKNIDYAYYVRVTAKYMQ-VPDLGLDQGVALEVRNLASEFVRMFPNSRYLA 152

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                +   +  LAA+E  IG +YL+RG ++AAI RF  +++ Y D+ +A E + RLVEA
Sbjct: 153 EVSQRLAAVQQHLAAREFMIGDFYLRRGGFIAAIKRFNSLVSGYPDSVYAHEGLYRLVEA 212

Query: 237 YVALALMDEAREVVSLIQERYP 258
           Y AL     A   +S + E  P
Sbjct: 213 YTALGDRQSAAMYLSRLGENSP 234


>gi|84516947|ref|ZP_01004305.1| competence lipoprotein ComL, putative [Loktanella vestfoldensis
           SKA53]
 gi|84509415|gb|EAQ05874.1| competence lipoprotein ComL, putative [Loktanella vestfoldensis
           SKA53]
          Length = 261

 Score =  111 bits (277), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 112/205 (54%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           ++++E     ++  N   A   F +  R + ++  A+++L+M AF  +  G Y  + +  
Sbjct: 21  QQIFELGERQIEAGNADDAAFTFGEIERLYHYSEFAQRALIMQAFAYHRDGDYPNSRAAA 80

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           + ++  YP  ++  Y  YL+ +SY   I D+  DQ  T   LQ + R++E Y +S Y   
Sbjct: 81  QRFVDFYPAEQDAPYAAYLLALSYYDQISDIGRDQGLTFEALQALRRVIETYPDSEYAAA 140

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           +     +  +QLAAKE+E+GRYYLKR  Y AA  RF+ V+ ++    H  EA+ RLVEAY
Sbjct: 141 SVAKFDLAFDQLAAKEMEVGRYYLKRANYAAAANRFRTVVEDFQTTTHTPEALHRLVEAY 200

Query: 238 VALALMDEAREVVSLIQERYPQGYW 262
           ++L L DEA+   +++   Y    W
Sbjct: 201 LSLGLTDEAQTAGAILGYNYQSSDW 225


>gi|254451800|ref|ZP_05065237.1| DNA uptake lipoprotein [Octadecabacter antarcticus 238]
 gi|198266206|gb|EDY90476.1| DNA uptake lipoprotein [Octadecabacter antarcticus 238]
          Length = 207

 Score =  110 bits (275), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 58/163 (35%), Positives = 92/163 (56%)

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
           +AF  +    Y  + +  + YI  YP   +  Y  YL+ +SY   I ++  DQ  T   L
Sbjct: 9   AAFSYHRDQDYPNSRAAAQHYIDFYPVDDDAAYAQYLLALSYYDQIDEIGRDQGLTFQAL 68

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
           Q +  ++ERY +S Y + +     +  + LAAKE+EIGRYYLKR  + AA+ RF++V+ +
Sbjct: 69  QALRVVIERYPDSEYARSSVLKFDLAFDHLAAKEMEIGRYYLKRDNFAAAVNRFRIVVED 128

Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           +    H  EA+ RLVE+Y++L L+DEAR   +++   Y    W
Sbjct: 129 FQTTSHTPEALHRLVESYLSLGLLDEARSAGAVLGYNYRSTEW 171


>gi|148259767|ref|YP_001233894.1| DNA uptake lipoprotein-like protein [Acidiphilium cryptum JF-5]
 gi|326403265|ref|YP_004283346.1| putative lipoprotein [Acidiphilium multivorum AIU301]
 gi|146401448|gb|ABQ29975.1| DNA uptake lipoprotein-like protein [Acidiphilium cryptum JF-5]
 gi|325050126|dbj|BAJ80464.1| putative lipoprotein [Acidiphilium multivorum AIU301]
          Length = 315

 Score =  109 bits (272), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 104/205 (50%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y   + +L +    KA   F +   ++P++  A  + L+  + +Y    +  A S    
Sbjct: 82  LYADGIAYLHKGENKKAARTFGEIEVNYPYSTWASHAELLQGYAEYREQNFDSAVSALNR 141

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           +I  +P S    Y YYL  + + + I DV  DQ  T    Q +  ++ R+ +S Y + AR
Sbjct: 142 FIELHPASPEAAYAYYLKALCFYEQIEDVQRDQTFTLEAAQALQDVISRFPDSAYARDAR 201

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             + +  N+LA  ++E+GR+Y ++  Y AAI R+Q+V+  Y       EA+ RLVE Y+ 
Sbjct: 202 IKLRLVENRLAGHQMEVGRFYQRQNLYAAAISRYQVVVQQYQTTTFVPEALDRLVECYLD 261

Query: 240 LALMDEAREVVSLIQERYPQGYWAR 264
           L L+ EAR   +++   YP   W R
Sbjct: 262 LGLVKEARRNAAVLGYNYPGSRWYR 286


>gi|254995247|ref|ZP_05277437.1| hypothetical protein AmarM_04700 [Anaplasma marginale str.
           Mississippi]
          Length = 289

 Score =  108 bits (270), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 103/198 (52%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            ++YE  +    E  + KA   F++    +PF+ +A    L++A   Y  G Y ++ASL 
Sbjct: 53  HKLYEDGLRLFHEGRYKKAIAVFDKIEALYPFSQMAIDGSLVAAVAHYELGNYAESASLA 112

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           E YI  YP SK++DY YY+  ++    I D+  DQ     +       V  + NS ++  
Sbjct: 113 EGYIDSYPSSKSIDYAYYVRILAKYMQIPDLGLDQGVALEVRNLAYEFVRMFPNSRHLGE 172

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
               +   +  LAA+E  IG++YLKRG ++AA+ RF+ +++ Y  + +  E + RLVEAY
Sbjct: 173 ISKRLAAVQQHLAAREFMIGKFYLKRGGHIAAVKRFRALISAYPSSAYTNEGLYRLVEAY 232

Query: 238 VALALMDEAREVVSLIQE 255
            AL     A   +S + E
Sbjct: 233 TALGDHKSAAAYLSKLDE 250


>gi|222475440|ref|YP_002563857.1| hypothetical protein AMF_769 [Anaplasma marginale str. Florida]
 gi|255003426|ref|ZP_05278390.1| hypothetical protein AmarPR_04180 [Anaplasma marginale str. Puerto
           Rico]
 gi|255004546|ref|ZP_05279347.1| hypothetical protein AmarV_04500 [Anaplasma marginale str.
           Virginia]
 gi|222419578|gb|ACM49601.1| Conserved hypothetical protein [Anaplasma marginale str. Florida]
          Length = 309

 Score =  108 bits (269), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 103/198 (52%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            ++YE  +    E  + KA   F++    +PF+ +A    L++A   Y  G Y ++ASL 
Sbjct: 53  HKLYEDGLRLFHEGRYKKAIAVFDKIEALYPFSQMAIDGSLVAAVAHYELGNYAESASLA 112

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           E YI  YP SK++DY YY+  ++    I D+  DQ     +       V  + NS ++  
Sbjct: 113 EGYIDSYPSSKSIDYAYYVRILAKYMQIPDLGLDQGVALEVRNLAYEFVRMFPNSRHLGE 172

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
               +   +  LAA+E  IG++YLKRG ++AA+ RF+ +++ Y  + +  E + RLVEAY
Sbjct: 173 ISKRLAAVQQHLAAREFMIGKFYLKRGGHIAAVKRFRALISAYPSSAYTNEGLYRLVEAY 232

Query: 238 VALALMDEAREVVSLIQE 255
            AL     A   +S + E
Sbjct: 233 TALGDHKSAAAYLSKLDE 250


>gi|56417074|ref|YP_154148.1| hypothetical protein AM1010 [Anaplasma marginale str. St. Maries]
 gi|56388306|gb|AAV86893.1| hypothetical protein AM1010 [Anaplasma marginale str. St. Maries]
          Length = 308

 Score =  108 bits (269), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 103/198 (52%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            ++YE  +    E  + KA   F++    +PF+ +A    L++A   Y  G Y ++ASL 
Sbjct: 53  HKLYEDGLRLFHEGRYKKAIAVFDKIEALYPFSQMAIDGSLVAAVAHYELGNYAESASLA 112

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           E YI  YP SK++DY YY+  ++    I D+  DQ     +       V  + NS ++  
Sbjct: 113 EGYIDSYPSSKSIDYAYYVRILAKYMQIPDLGLDQGVALEVRNLAYEFVRMFPNSRHLGE 172

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
               +   +  LAA+E  IG++YLKRG ++AA+ RF+ +++ Y  + +  E + RLVEAY
Sbjct: 173 ISKRLAAVQQHLAAREFMIGKFYLKRGGHIAAVKRFRALISAYPSSAYTNEGLYRLVEAY 232

Query: 238 VALALMDEAREVVSLIQE 255
            AL     A   +S + E
Sbjct: 233 TALGDHKSAAAYLSKLDE 250


>gi|126735392|ref|ZP_01751138.1| competence lipoprotein ComL, putative [Roseobacter sp. CCS2]
 gi|126715947|gb|EBA12812.1| competence lipoprotein ComL, putative [Roseobacter sp. CCS2]
          Length = 283

 Score =  108 bits (269), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 121/221 (54%), Gaps = 1/221 (0%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           S  D   + + D+  Q +++E+    ++  N   A   F +  R +P++  A+++L+M A
Sbjct: 28  SGNDRGGEPLDDLTAQ-QIFERGERQIERGNPDDAAFTFGEIERLYPYSEFAQRALIMQA 86

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           F  +    Y  + +  + Y+  YP  ++  Y  YL+ +SY   I +V  DQ  T   LQ 
Sbjct: 87  FAYHRDEDYPNSRASAQRYLDFYPAEEDAAYAAYLLALSYYDQIDEVGRDQGLTFQALQS 146

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
           +  ++E+Y +S Y   +     +  + LAAKE+EIGR+YLKRG Y+AA  RF+ V+ ++ 
Sbjct: 147 LRLVIEQYPDSEYASTSVLKFDLAFDHLAAKEMEIGRFYLKRGNYIAASNRFRTVVEDFQ 206

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
              H  EA+ RLVE+Y++L L++EA+   +++   Y    W
Sbjct: 207 TTSHTPEALHRLVESYLSLGLLEEAQTAGAILGYNYQSSEW 247


>gi|329890234|ref|ZP_08268577.1| competence lipoprotein comL [Brevundimonas diminuta ATCC 11568]
 gi|328845535|gb|EGF95099.1| competence lipoprotein comL [Brevundimonas diminuta ATCC 11568]
          Length = 287

 Score =  107 bits (267), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 104/205 (50%), Gaps = 2/205 (0%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y      L+ + +  A +YF +  R  P++  AR+++LM  +  Y    YQ A +  + 
Sbjct: 48  LYNTGYQRLQSKRWMDAVDYFQEVERQHPYSEWARRAILMQVYAYYQNNNYQDAIAAADR 107

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           +I  +P + +  Y +Y+  +   + I DV  DQ   +  L  +  +V RY  S Y   AR
Sbjct: 108 FIALFPGNPSASYAFYMKAVCNFEQIVDVGRDQGYAEAALAGLRDVVRRYPGSSYATDAR 167

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN--YSDAEHAEEAMARLVEAY 237
             + +  +QLA KE+ +GRYY +  + + A+ R++ V+ N  +    H  EA+ RLVE  
Sbjct: 168 VKIDMVNDQLAGKEMTVGRYYQRANQPLGALNRYKAVINNPDFQRTSHTPEALYRLVEVN 227

Query: 238 VALALMDEAREVVSLIQERYPQGYW 262
           ++L L +EA    +++   YP   W
Sbjct: 228 LSLGLTEEATRNAAVLGHNYPGSPW 252


>gi|254419865|ref|ZP_05033589.1| outer membrane assembly lipoprotein YfiO [Brevundimonas sp. BAL3]
 gi|196186042|gb|EDX81018.1| outer membrane assembly lipoprotein YfiO [Brevundimonas sp. BAL3]
          Length = 284

 Score =  106 bits (265), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 105/205 (51%), Gaps = 2/205 (0%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y      L+++ ++ A +YF +  R  P++  AR+S+LM  +  Y    Y  A +  + 
Sbjct: 47  LYNTGYQRLEQRRWADAVDYFQEVERQHPYSDWARRSILMQVYAFYQNNNYADAIAASDR 106

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           +I+ +P + +  Y +Y+  +   + I DV  DQ      L  +  +  RY  +PY   A 
Sbjct: 107 FISLFPGNPSAAYAFYMKAVCNFEQITDVGRDQGYANAALAGLKDVARRYPGTPYASDAA 166

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN--YSDAEHAEEAMARLVEAY 237
             + +  +QLA KE+ IGRYY +  + +AA+ R++ V+AN  +    H  EA+ RLVE  
Sbjct: 167 VKIDMVNDQLAGKEMNIGRYYQRANQPLAALNRYKAVIANPEFQRTSHTPEALYRLVEVN 226

Query: 238 VALALMDEAREVVSLIQERYPQGYW 262
           + L L +EA    +++   +P   W
Sbjct: 227 LQLGLKEEATRNGAVLGYNFPGSPW 251


>gi|58584928|ref|YP_198501.1| DNA uptake lipoprotein [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
 gi|58419244|gb|AAW71259.1| DNA uptake lipoprotein [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
          Length = 237

 Score =  105 bits (263), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 126/242 (52%), Gaps = 9/242 (3%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +YK  +T F  +   F   +   +S DV+L+     + + E+YE+AV    ++ + +A  
Sbjct: 1   MYKALITCFIFLVCSFTRSY---ASDDVHLE-----KSETELYEEAVELFDQKKYKQAIR 52

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            F +    +PF+  A K+ L+S    Y+   Y  AAS  ++YI  YP  +++ YVYYL  
Sbjct: 53  AFRKIEDLYPFSYWAMKAKLLSGISHYNMDDYSSAASDMDDYIYIYPNGEDLPYVYYLRV 112

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           +SY   I  V   Q+     L+  +  V  ++ S Y++  +  V +  + +  KE  IG+
Sbjct: 113 LSYYMQINRVQLGQQTAYKALELAAEYVNLFSESEYIEEMKEKVRLITDHILKKEYSIGK 172

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           +Y +RGEY+AAI RFQ ++++  D  +   ++  L+ AY AL L  EA +  SL+ E   
Sbjct: 173 FYFRRGEYLAAIKRFQNIISS-KDYSYFPRSINYLIAAYSALGLDLEAGQYESLLAENLK 231

Query: 259 QG 260
           + 
Sbjct: 232 EN 233


>gi|330813742|ref|YP_004357981.1| putative competence lipoprotein ComL [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327486837|gb|AEA81242.1| putative competence lipoprotein ComL [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 279

 Score =  105 bits (262), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 118/221 (53%), Gaps = 2/221 (0%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV-ARKSLLMSA 101
           ++ ++++  T +  +R +Y +A+L  K   +  A E F +  +++ F    A KSLLM  
Sbjct: 25  NKTIFVEPKTTIPLER-LYTEALLNYKNNKYQDAVELFEEVEKNYSFNTEWASKSLLMRG 83

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           ++ Y   +Y ++  + +++  +Y  +KN+DYV YL+ M   + I  +   Q  T L  + 
Sbjct: 84  YIYYEVSRYVESLEILKKFKMRYAGNKNMDYVEYLIAMCLFEQINIIALSQENTLLTERQ 143

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
             +I+  Y NS Y + ++F + + ++QLA KE+ I RYY +R ++  A+ R   VL  + 
Sbjct: 144 FKKIILNYPNSRYAEDSKFKLDLIQDQLAGKEMYIARYYTEREKWGPALVRLNKVLKYHE 203

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
              + EEA+ RLVE +  L  +  AR+  S++   Y    W
Sbjct: 204 TTVYIEEALHRLVEIHYKLGNIPAARKYASILGYNYNDSDW 244


>gi|117923624|ref|YP_864241.1| DNA uptake lipoprotein-like protein [Magnetococcus sp. MC-1]
 gi|117607380|gb|ABK42835.1| DNA uptake lipoprotein-like protein [Magnetococcus sp. MC-1]
          Length = 302

 Score =  105 bits (261), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 113/231 (48%), Gaps = 7/231 (3%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
           V  L G      +DV  D   +V     +Y  AV  ++++N+  A   F    +  PF+ 
Sbjct: 19  VLLLSGCSSTEEKDVQPDLAPEV-----MYRMAVNHVQKKNYKSAATIFTDLDQKHPFSP 73

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
            A ++ L   F  Y   ++ +A    + +I  +P    V Y +Y++G+++ + I+D   D
Sbjct: 74  WAVRAQLNLIFATYKQDEFDEAVGHAKRFIRLHPRHPEVSYAFYMIGLAHYRQIKDPYRD 133

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           Q  TK        ++ R+  S Y   A+  +   RN++A +E+ +GRYY  RGEY+AA+ 
Sbjct: 134 QARTKEAATAFHEVINRFGESDYAWEAQKMLDFCRNRMAQQEIVVGRYYFDRGEYIAAMK 193

Query: 212 RFQLVLAN--YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           RF  ++ N  + D+   EEA+  +V + + L L  EA+    ++   Y  G
Sbjct: 194 RFNEIVDNPEFRDSLQTEEALFSMVLSALKLGLEQEAKNYAVVLGHNYKDG 244


>gi|67809654|gb|AAY81973.1| putative competence lipoprotein [Wolbachia pipientis]
          Length = 209

 Score =  104 bits (259), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 110/197 (55%), Gaps = 1/197 (0%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           + E+YE+AV    ++ ++KA   F++    +PF+  A K+ L+S    Y+ G Y  AAS 
Sbjct: 9   ETELYEEAVELFDQKKYNKAIRAFHKIEDLYPFSYWAMKAKLLSGVSHYNMGNYSSAASD 68

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            ++YI  Y   +++ YVYYL  +SY   I  V   Q+     L+  +  +  +  S YV 
Sbjct: 69  MDDYIYVYSNGEDLPYVYYLRVLSYYMQINKVQLGQQTAYKTLELATEYINLFPGSEYVD 128

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
             +    +    ++ KE  IG++YL+RGEY+AAI RFQ  +A+Y D+++  +++  L+ A
Sbjct: 129 EIKERAKLITEHISTKEYSIGKFYLRRGEYLAAIKRFQ-NMASYKDSKYFSKSINYLIAA 187

Query: 237 YVALALMDEAREVVSLI 253
           + AL L  EA +  S++
Sbjct: 188 HSALGLDLEAEQYESML 204


>gi|319786172|ref|YP_004145647.1| outer membrane assembly lipoprotein YfiO [Pseudoxanthomonas
           suwonensis 11-1]
 gi|317464684|gb|ADV26416.1| outer membrane assembly lipoprotein YfiO [Pseudoxanthomonas
           suwonensis 11-1]
          Length = 297

 Score =  103 bits (258), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 123/246 (50%), Gaps = 19/246 (7%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
            RD       + R   E+YEK   +++  N++ A   F +    +P+     ++L+ +A+
Sbjct: 34  GRDKKKKDADEGRPVAELYEKGHGYMERGNWTGAETVFRRLVAQYPYGPYTEQALMETAY 93

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL----- 157
            QY AG++ +A S  + +I  YP  +N+ Y YYL G+S +   RD  + QR   L     
Sbjct: 94  AQYKAGRHDEAVSTIDRFIRTYPTHRNIAYFYYLRGLSNSN--RDAVFMQRVWSLDPSRR 151

Query: 158 -------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
                    +  + + +RY NS Y   AR  + V RN  A  E++I  YY++RG +++A+
Sbjct: 152 DLSSPQQAYEDFNTVAQRYPNSRYAPDARQRMVVLRNVFARHEMDIALYYMRRGAWLSAV 211

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAREVVSLIQERYP--QGYWARY 265
            R + +L  Y  +++  +A+A L E+Y  L    L ++A  V+ L   ++P   G W +Y
Sbjct: 212 SRAKYILETYPQSDYQYDAIAALAESYDNLGQKQLSEDAIRVLRLNDPQHPYLSGDWPKY 271

Query: 266 VETLVK 271
              + K
Sbjct: 272 PWAIRK 277


>gi|42520353|ref|NP_966268.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of
           Drosophila melanogaster]
 gi|42410091|gb|AAS14202.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of
           Drosophila melanogaster]
          Length = 235

 Score =  103 bits (257), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 123/235 (52%), Gaps = 12/235 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +YK  +T F      FL+    QS    Y D +   + + E+YE+AV    ++ + +A  
Sbjct: 1   MYKTLITCFI-----FLICSFTQS----YADDLE--KTETELYEEAVELFDQKKYKQAIR 49

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            F++    +PF+  A K+ L+S    Y+ G Y  AAS   +YI  Y   +++ YVYYL  
Sbjct: 50  AFHKIEDLYPFSYWAMKAKLLSGVSHYNMGNYSSAASDMADYIYVYSNGEDLPYVYYLRV 109

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           +SY   I  V   Q+     L+  +  +  +  S YV   +    +    ++ KE  IG+
Sbjct: 110 LSYYMQINKVQLGQQTAYKTLELATEYINLFPGSEYVDEIKERAKLITEHISTKEYSIGK 169

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +YL+RGEY+AAI RFQ  +A+Y D+++  +++  L+ A+ AL L  EA +  S++
Sbjct: 170 FYLRRGEYLAAIKRFQ-NMASYKDSKYFSKSINHLIAAHSALGLDLEAEQYESML 223


>gi|225630083|ref|YP_002726874.1| competence lipoprotein ComL, putative [Wolbachia sp. wRi]
 gi|225592064|gb|ACN95083.1| competence lipoprotein ComL, putative [Wolbachia sp. wRi]
          Length = 217

 Score =  102 bits (253), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 120/229 (52%), Gaps = 12/229 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +YK  +T F      FL+    QS    Y D +   + + E+YE+AV    ++ + +A  
Sbjct: 1   MYKTLITCFI-----FLICSFTQS----YADDLE--KTETELYEEAVELFDQKKYKQAIR 49

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            F++    +PF+  A K+ L+S    Y+ G Y  AAS  ++YI  Y   +++ YVYYL  
Sbjct: 50  AFHKIEDLYPFSYWAMKAKLLSGVSHYNMGNYSSAASDMDDYIYVYSNGEDLPYVYYLRV 109

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           +SY   I  V   Q+     L+  +  +  +  S YV   +    +    ++ KE  IG+
Sbjct: 110 LSYYMQINKVQLGQQTAYKTLELATEYINLFPGSEYVDEIKERAKLITEHISTKEYSIGK 169

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
           +YL+RGEY+AAI RFQ  +A+Y D+++  +++  LV A+ AL L  EA 
Sbjct: 170 FYLRRGEYLAAIKRFQ-NMASYKDSKYFSKSINYLVAAHSALGLDLEAE 217


>gi|194366932|ref|YP_002029542.1| outer membrane assembly lipoprotein YfiO [Stenotrophomonas
           maltophilia R551-3]
 gi|194349736|gb|ACF52859.1| outer membrane assembly lipoprotein YfiO [Stenotrophomonas
           maltophilia R551-3]
          Length = 289

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 126/258 (48%), Gaps = 20/258 (7%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           LT    + V    G  R + +    D  T V    ++YEK+   ++  N+S A   F + 
Sbjct: 8   LTALLLVLVIAATGCHRGAKKGDRPDEGTPVE---QLYEKSHKLMQGGNWSGAESSFRRL 64

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +P+     ++++ +A+ QY AGK+  A S  + +I  YP  +N+ Y+YYL G++ + 
Sbjct: 65  VAQYPYGPYTEQAMIETAYAQYKAGKHDDAVSSIDRFIRTYPTHRNIAYLYYLRGLANSN 124

Query: 144 ----MIRDVPYDQRATKLMLQYMSR-------IVERYTNSPYVKGARFYVTVGRNQLAAK 192
                +R V +   A++  L    +       +V+RY NS Y   AR  +   R+  A  
Sbjct: 125 RSTVFLRHV-WSLDASRRDLSTPHQAYSDFNIVVDRYPNSRYAADARQRMLELRDVFAQH 183

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAREV 249
           E++   YY++RG +V+A  R   +L  Y  +    +A+A L ++Y  L    L D+AR V
Sbjct: 184 ELDNALYYMRRGAWVSAAGRANYLLETYPQSAFQYDAVAVLADSYTHLGNKTLADDARRV 243

Query: 250 VSLIQERYP--QGYWARY 265
           + L Q  +P  +G W +Y
Sbjct: 244 LQLNQPDHPWLEGKWPKY 261


>gi|91762852|ref|ZP_01264817.1| putative competence lipoprotein ComL [Candidatus Pelagibacter
           ubique HTCC1002]
 gi|91718654|gb|EAS85304.1| putative competence lipoprotein ComL [Candidatus Pelagibacter
           ubique HTCC1002]
          Length = 282

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 99/183 (54%)

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
           FN+    FP +  A KS +M+A+  Y+   Y  A    E Y+  YP  K+  Y ++L+GM
Sbjct: 62  FNEAELLFPQSPWAAKSAIMAAYAYYTQDYYGDAIFELERYLVTYPNHKDKVYAHFLLGM 121

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           S+ + I D   D ++     +    ++  Y ++ +   A+F + +    LAAKE+ I RY
Sbjct: 122 SFYEQIVDEKKDLKSILDSKEQFETLIRDYPSTEFAMDAKFKIDLINEILAAKEMYIARY 181

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           YLK+ +++ A+ RF+ V+ +Y+   + EEA+ RLVE    L L++E+++  S +   Y  
Sbjct: 182 YLKKTKWIPALNRFKTVVKDYNTTIYTEEALHRLVEINYRLGLINESKKYASTLGYNYQS 241

Query: 260 GYW 262
             W
Sbjct: 242 SDW 244


>gi|254525277|ref|ZP_05137332.1| competence lipoprotein [Stenotrophomonas sp. SKA14]
 gi|219722868|gb|EED41393.1| competence lipoprotein [Stenotrophomonas sp. SKA14]
          Length = 289

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 126/258 (48%), Gaps = 20/258 (7%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           LT    + V    G  R + +    D  T V    ++YEK+   ++  N+S A   F + 
Sbjct: 8   LTALLLVLVIAATGCHRGAKKGDRPDEGTPVE---QLYEKSHKLMQGGNWSGAETSFRRL 64

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +P+     ++++ +A+ QY AGK+  A S  + +I  YP  +N+ Y+YYL G++ + 
Sbjct: 65  VAQYPYGPYTEQAMIETAYAQYKAGKHDDAVSSIDRFIRTYPTHRNIAYLYYLRGLANSN 124

Query: 144 ----MIRDVPYDQRATKLMLQYMSR-------IVERYTNSPYVKGARFYVTVGRNQLAAK 192
                +R V +   A++  L    +       +V+RY NS Y   AR  +   R+  A  
Sbjct: 125 RSTVFLRRV-WSLDASRRDLSTPHQAYSDFNIVVDRYPNSRYAADARSRMLELRDVFAQH 183

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAREV 249
           E++   YY++RG +V+A  R   +L  Y  +    +A+A L ++Y  L    L D+AR V
Sbjct: 184 ELDNALYYMRRGAWVSAAGRANYLLETYPQSAFQYDAVAVLADSYTHLGNKTLADDARRV 243

Query: 250 VSLIQERYP--QGYWARY 265
           + L Q  +P  +G W +Y
Sbjct: 244 LQLNQPDHPWLEGKWPKY 261


>gi|190575602|ref|YP_001973447.1| putative competence lipoprotein [Stenotrophomonas maltophilia
           K279a]
 gi|190013524|emb|CAQ47159.1| putative competence lipoprotein precursor [Stenotrophomonas
           maltophilia K279a]
          Length = 295

 Score =  100 bits (248), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 126/258 (48%), Gaps = 20/258 (7%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           LT    + V    G  R + +    D  T V    ++YEK+   ++  N+S A   F + 
Sbjct: 14  LTALLLVLVIAATGCHRGAKKGDRPDEGTPVE---QLYEKSHKLMQGGNWSGAETSFRRL 70

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +P+     ++++ +A+ QY AGK+  A S  + +I  YP  +N+ Y+YYL G++ + 
Sbjct: 71  VAQYPYGPYTEQAMIETAYAQYKAGKHDDAVSSIDRFIRTYPTHRNIAYLYYLRGLANSN 130

Query: 144 ----MIRDVPYDQRATKLMLQYMSR-------IVERYTNSPYVKGARFYVTVGRNQLAAK 192
                +R V +   A++  L    +       +V+RY NS Y   AR  +   R+  A  
Sbjct: 131 RSTVFLRRV-WSLDASRRDLSTPHQAYSDFNIVVDRYPNSRYAADARQRMLELRDVFAQH 189

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAREV 249
           E++   YY++RG +V+A  R   +L  Y  +    +A+A L ++Y  L    L D+AR V
Sbjct: 190 ELDNALYYMRRGAWVSAAGRANYLLETYPQSAFQYDAVAVLADSYTHLGNKTLADDARRV 249

Query: 250 VSLIQERYP--QGYWARY 265
           + L Q  +P  +G W +Y
Sbjct: 250 LQLNQPDHPWLEGKWPKY 267


>gi|253996249|ref|YP_003048313.1| outer membrane assembly lipoprotein YfiO [Methylotenera mobilis
           JLW8]
 gi|253982928|gb|ACT47786.1| outer membrane assembly lipoprotein YfiO [Methylotenera mobilis
           JLW8]
          Length = 267

 Score = 99.8 bits (247), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 13/212 (6%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y++    ++++++ KA  YF +    +P    A ++ L +A+  Y       A +  + 
Sbjct: 36  IYQEGAAKMQDRDYDKAIVYFQKLESRYPHGKYATQAQLETAYAHYKKQDPVSAVAAADR 95

Query: 120 YITQYPESKNVDYVYYLVGMS-----------YAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +I  +P+  NVDY YYL G++             Q + D   D RA K        +V R
Sbjct: 96  FIKLHPDHPNVDYAYYLKGLAVFNERGIIEKLTKQQVSDR--DPRALKDSFATFKELVTR 153

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y  S YVK A   +    N L+  E+ + RYY+KR  YVAAI R + V+  Y  + H EE
Sbjct: 154 YPKSRYVKDATQRMVYLANSLSEHELHVARYYMKRKAYVAAINRTKYVIEYYPQSPHVEE 213

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           A+  ++ AY  + + D   + + +++  YP  
Sbjct: 214 ALVIMISAYDLMGMDDLKNDTLRVLKTNYPDS 245


>gi|190571590|ref|YP_001975948.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of
           Culex quinquefasciatus Pel]
 gi|213018995|ref|ZP_03334802.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of
           Culex quinquefasciatus JHB]
 gi|190357862|emb|CAQ55321.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of
           Culex quinquefasciatus Pel]
 gi|212995104|gb|EEB55745.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of
           Culex quinquefasciatus JHB]
          Length = 228

 Score = 99.8 bits (247), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 111/199 (55%), Gaps = 1/199 (0%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           + E+YE+AV    ++ + +A   F +    +P +  A K+ L+S    Y+ G Y  AAS 
Sbjct: 28  ETELYEEAVKLYDQKKYKQAIRAFQKIEDLYPLSYWAMKAKLLSGVSYYNMGNYSSAASD 87

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            ++YI  YP  +++ YVYYL  +SY   I  V   Q+     L+  +  +  + NS Y++
Sbjct: 88  MDDYIYVYPNGEDLPYVYYLRVLSYYMQINKVQLGQQIAYKTLELATEYINLFPNSEYIE 147

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
             +    +    ++ KE  IG +YLKRGEY+AAI RFQ +++N  D++++   ++ L+ A
Sbjct: 148 EIKEKEKLITEHISKKEYSIGEFYLKRGEYLAAIKRFQDMISN-KDSKYSSRVISYLITA 206

Query: 237 YVALALMDEAREVVSLIQE 255
           ++AL L  EA +  +++ E
Sbjct: 207 HLALGLDLEAEQYENMLVE 225


>gi|297172748|gb|ADI23714.1| DNA uptake lipoprotein [uncultured Oceanospirillales bacterium
           HF4000_21D01]
          Length = 327

 Score = 99.4 bits (246), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 115/240 (47%), Gaps = 16/240 (6%)

Query: 30  IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
           I+ C   GW      D   D  + +  + + Y +A+  L  Q+F+ A   +      FPF
Sbjct: 18  ISAC---GW---FGDDEDADEFSGLSTEEQFYRRALDQLNGQSFNAAISTYQALESRFPF 71

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY-----AQM 144
              A ++ +   +  Y     + A +  + +I  +PE++NVDY YY+ G+S        +
Sbjct: 72  GRFAAQAQIEIVYAYYRNNDVEAARAAADRFIRLHPENENVDYAYYMKGLSSFSDNRGLL 131

Query: 145 IRDVPYDQRA-----TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
            R +P D        ++      S+++  Y +SPY   AR  +   RN LAA E+ +  Y
Sbjct: 132 NRFLPIDPTKRDPGRSRESFSDFSQLLALYPDSPYAADARARMIFLRNNLAAYEIHVANY 191

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           YL+R  Y+AA+ R Q V+ N+         +A ++E Y+ L L D A   ++L++E YPQ
Sbjct: 192 YLERSAYIAALRRGQYVVENFQGTPAVAYGVAIMIEGYLRLGLDDLADTSLALLRENYPQ 251


>gi|225677404|ref|ZP_03788371.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
 gi|225590548|gb|EEH11808.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
          Length = 235

 Score = 99.4 bits (246), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 121/235 (51%), Gaps = 12/235 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +YK  +T F      FL+    QS    Y D +   + + E+YE+AV    ++ + +A  
Sbjct: 1   MYKTLITCFI-----FLICSFTQS----YADDLE--KTETELYEEAVELFDQKKYKQAVR 49

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            F++    +PF+  A K+ L+S    Y+ G Y  AAS   +YI  Y   +++ YVYYL  
Sbjct: 50  AFHKIEDLYPFSYWAMKAKLLSGVSHYNMGNYSSAASDMADYIYVYSNGEDLPYVYYLRV 109

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           +SY   I  V   Q+     L+  +  +  +  S YV   +    +    ++ KE  IG+
Sbjct: 110 LSYYMQINKVQLGQQTAYKTLELATEYINLFPGSEYVGEIKEKAKLITEHISTKEYSIGK 169

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +YLKRGEY+AAI RFQ +  +Y D+++  +++  L+ A+ AL L  E  +  S++
Sbjct: 170 FYLKRGEYLAAIKRFQNI-ESYKDSKYFSKSINYLIAAHSALGLDLEVEQYESML 223


>gi|239787476|emb|CAX83947.1| DNA uptake lipoprotein-like protein precursor [uncultured
           bacterium]
          Length = 289

 Score = 98.6 bits (244), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 114/214 (53%), Gaps = 2/214 (0%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y + V  +++  F  A + F +  R  PF+  A ++ L   +  Y   +Y++A S  E 
Sbjct: 36  LYRQGVQAIQKNRFPVAVKRFQEVDRKHPFSPWAVRAQLNLIYAHYMDEEYEEALSAAER 95

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           ++  +P   +V Y YY++ +++ + I D   DQ  TK        ++ R+ +S Y + AR
Sbjct: 96  FVRLHPRHPHVAYPYYMLALAHYKRIADPLRDQGHTKQAEVAFRELIARFPDSDYAEEAR 155

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN--YSDAEHAEEAMARLVEAY 237
             + + R++LAA+EV +GR+YL R +Y+AA  RF+ V+ N  ++   + EEA+  LV + 
Sbjct: 156 RMLELCRDRLAAQEVVVGRFYLDRDQYIAATNRFRRVVENQDFNRTPYVEEALFGLVMSS 215

Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           + L L  EA    +++   Y  G +  +   +V+
Sbjct: 216 LKLGLPQEALTYAAVLGHNYADGPFYPHARAMVE 249


>gi|18203349|sp|Q9PEU0|Y938_XYLFA RecName: Full=UPF0169 lipoprotein XF_0938; Flags: Precursor
          Length = 292

 Score = 98.6 bits (244), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 121/256 (47%), Gaps = 24/256 (9%)

Query: 33  CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
             + G  R++ ++   D    V +   +Y+KA   +K+ N++ A   F +    +P+   
Sbjct: 22  VLITGCHREAKKNA--DDGMPVEH---LYDKAHTLMKKGNWAGAEVSFKRLIAQYPYGPY 76

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY-- 150
             ++++ +A+ QY +GK+  A S  + +I  YP   N+ Y+YYL G+S +   RD  +  
Sbjct: 77  TEQAMVENAYAQYKSGKHDDAVSSIDRFIRTYPTHHNIPYLYYLRGLSNSN--RDTIFLR 134

Query: 151 ----------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
                     D  A +        +++RY NS Y   A+  +T  RN  A  E+ +  YY
Sbjct: 135 KVWSLDLSRRDLSAPQQAYNDFKTVLDRYPNSRYAADAKKQMTELRNMFAQYEMNVTLYY 194

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAREVVSLIQERY 257
           L+R  +VAA  R   +L  Y  +    +A+A L EAY  L    L D AR+V+      +
Sbjct: 195 LRRTAWVAAAGRANFLLETYPQSAFQYDAVAALGEAYTHLGNKTLADNARQVLQTNAPDH 254

Query: 258 P--QGYWARYVETLVK 271
           P  +G W +Y   + K
Sbjct: 255 PWLKGKWPKYPAAIRK 270


>gi|15837540|ref|NP_298228.1| hypothetical protein XF0938 [Xylella fastidiosa 9a5c]
 gi|9105861|gb|AAF83748.1|AE003932_12 conserved hypothetical protein [Xylella fastidiosa 9a5c]
          Length = 297

 Score = 98.6 bits (244), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 121/256 (47%), Gaps = 24/256 (9%)

Query: 33  CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
             + G  R++ ++   D    V +   +Y+KA   +K+ N++ A   F +    +P+   
Sbjct: 27  VLITGCHREAKKNA--DDGMPVEH---LYDKAHTLMKKGNWAGAEVSFKRLIAQYPYGPY 81

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY-- 150
             ++++ +A+ QY +GK+  A S  + +I  YP   N+ Y+YYL G+S +   RD  +  
Sbjct: 82  TEQAMVENAYAQYKSGKHDDAVSSIDRFIRTYPTHHNIPYLYYLRGLSNSN--RDTIFLR 139

Query: 151 ----------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
                     D  A +        +++RY NS Y   A+  +T  RN  A  E+ +  YY
Sbjct: 140 KVWSLDLSRRDLSAPQQAYNDFKTVLDRYPNSRYAADAKKQMTELRNMFAQYEMNVTLYY 199

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAREVVSLIQERY 257
           L+R  +VAA  R   +L  Y  +    +A+A L EAY  L    L D AR+V+      +
Sbjct: 200 LRRTAWVAAAGRANFLLETYPQSAFQYDAVAALGEAYTHLGNKTLADNARQVLQTNAPDH 259

Query: 258 P--QGYWARYVETLVK 271
           P  +G W +Y   + K
Sbjct: 260 PWLKGKWPKYPAAIRK 275


>gi|254482813|ref|ZP_05096050.1| outer membrane assembly lipoprotein YfiO [marine gamma
           proteobacterium HTCC2148]
 gi|214036894|gb|EEB77564.1| outer membrane assembly lipoprotein YfiO [marine gamma
           proteobacterium HTCC2148]
          Length = 289

 Score = 98.6 bits (244), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 116/249 (46%), Gaps = 17/249 (6%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           K+AL    S+    ++G    S  D   D   D   Q ++YE+A  +L+ +N++ A    
Sbjct: 2   KYALVFLLSL---IIIGC---SGNDELPDIAADTGEQ-QIYEEAQRYLRNKNWNLAVRSL 54

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
                 +PF   A +S L   +  Y+  ++  A    E +I  +P   NVDY YY+ G++
Sbjct: 55  QVLESRYPFGKYAEQSQLEIIYAHYNGYEHDAAVEAAERFIRLHPAHPNVDYAYYMKGLA 114

Query: 141 YAQMIRDV-----PYDQRA-----TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
                 D+     P D+        K      +++V R+ +SPY   AR  +   RN LA
Sbjct: 115 AFAGNDDIFSRFLPTDESERDVSQAKEAFAEFNQLVSRFPDSPYAPDARARMVHLRNLLA 174

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
             E+ +  YY +RG Y+AA  R + V+ N+       + +A + + Y+ L L D A++ +
Sbjct: 175 RHEILVANYYFRRGAYMAATNRGRYVVENFQRTPAVADGLAVMAQGYILLGLEDLAKDTI 234

Query: 251 SLIQERYPQ 259
            ++   YP+
Sbjct: 235 GILAMNYPE 243


>gi|285017489|ref|YP_003375200.1| lipoprotein precursor [Xanthomonas albilineans GPE PC73]
 gi|283472707|emb|CBA15212.1| putative lipoprotein precursor [Xanthomonas albilineans]
          Length = 291

 Score = 98.6 bits (244), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 110/224 (49%), Gaps = 19/224 (8%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y+K    ++  N+S A   F +    +P+     ++++ SA+ QY AGK+  A S  +
Sbjct: 43  QLYQKGHAQMESGNWSGADHSFKRLIAQYPYGQYTEQAMIESAYAQYKAGKHDDAVSTID 102

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY------------MSRIV 166
            +I  YP  +N+ Y+YYL G+S +   RD  + +R   L                 + + 
Sbjct: 103 RFIRTYPTQRNIAYMYYLRGLSNSN--RDTVFLRRLWSLDPSRRDLSTPQQAYADFNTVT 160

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
           +RY NS Y   AR  +   RN  A  E++   YYL+RG +V+A  R   +L  Y  +   
Sbjct: 161 DRYPNSRYAADARERMIALRNVFAQHELDNALYYLRRGAWVSATSRANYLLETYPQSAFQ 220

Query: 227 EEAMARLVEAYVAL---ALMDEAREVVSLIQERYP--QGYWARY 265
            +A+A L +AY  L   AL  +AR V+ L   ++P   G W +Y
Sbjct: 221 YDAVAVLADAYTHLGNKALAADARRVLELNDPKHPWLSGQWPKY 264


>gi|71898900|ref|ZP_00681067.1| putative lipoprotein [Xylella fastidiosa Ann-1]
 gi|71731312|gb|EAO33376.1| putative lipoprotein [Xylella fastidiosa Ann-1]
          Length = 292

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 121/255 (47%), Gaps = 24/255 (9%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
            + G  R++ ++   D    V +   +Y+KA   +K+ N++ A   F +    +P+    
Sbjct: 23  LITGCHRETKKNA--DDGMPVEH---LYDKAHTLMKKGNWAGAEVSFKRLIAQYPYGPYT 77

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY--- 150
            ++++ +A+ QY +GK+  A S  + +I  YP   N+ Y+YYL G+S +   RD  +   
Sbjct: 78  EQAMVENAYAQYKSGKHDDAVSSIDRFIRTYPTHHNIPYMYYLRGLSNSN--RDTIFLRK 135

Query: 151 ---------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
                    D  A +        +++RY NS Y   A+  +T  RN  A  E+ +  YYL
Sbjct: 136 VWSLDLSRRDLSAPQQAYNDFKTVLDRYPNSRYAADAKKQMTELRNMFAQYEMNVILYYL 195

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAREVVSLIQERYP 258
           +R  +VAA  R   +L  Y  +    +A+A L EAY  L    L D AR+V+      +P
Sbjct: 196 RRTAWVAAAGRANFLLETYPQSAFQYDAVAALGEAYTHLGNKTLADNARQVLQTNAPDHP 255

Query: 259 --QGYWARYVETLVK 271
             +G W +Y   + K
Sbjct: 256 WLKGKWPKYPAAIRK 270


>gi|91775966|ref|YP_545722.1| putative competence lipoprotein precursor [Methylobacillus
           flagellatus KT]
 gi|91709953|gb|ABE49881.1| putative competence lipoprotein precursor [Methylobacillus
           flagellatus KT]
          Length = 267

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 111/252 (44%), Gaps = 20/252 (7%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           +  AL     +  C + G   +      LD       QR +Y  AV  +  +++ KA +Y
Sbjct: 3   HSLALIAVLWLTGCAIFGAPTE------LDETKGWPVQR-IYAAAVENMTTRDYEKAIKY 55

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
           F      +P    A +S L   +  Y         +  + +I  +P   NVDY YY+ G+
Sbjct: 56  FQILESRYPHGRYATQSQLEVIYAHYKKNDPAATMAAADRFIKLHPNHPNVDYAYYMKGL 115

Query: 140 SY-----------AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +             Q I D   D ++ +     +  +V R+ NS YVK A   ++   N 
Sbjct: 116 ATFNERGIIEKLTKQQISD--RDPKSLRESFLALKELVNRFPNSRYVKDATLRMSYLVNS 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E+ + RYY+KR  YVAA  R + V+  Y D  H EEA+  L+ AY A+++ D   +
Sbjct: 174 LAQHELHVARYYMKRQAYVAAANRCKYVMEFYPDTPHIEEALVILISAYDAMSMDDLRDD 233

Query: 249 VVSLIQERYPQG 260
              ++ + YP  
Sbjct: 234 AKRVLAQNYPNS 245


>gi|114775489|ref|ZP_01451057.1| probable transmembrane protein [Mariprofundus ferrooxydans PV-1]
 gi|114553600|gb|EAU55981.1| probable transmembrane protein [Mariprofundus ferrooxydans PV-1]
          Length = 228

 Score = 96.7 bits (239), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 98/211 (46%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            YEK+   +   N+++A       S  +P++  A ++ L+  F  Y   ++  +  L + 
Sbjct: 18  AYEKSKHQVTIGNYAEATMALEHFSSKYPYSKFAIQAELLRIFAAYKDDEFVLSEVLSQR 77

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           +I  +P   N DY  Y++ MS  +       D    K  ++   +++  + +S Y K  +
Sbjct: 78  FIDLHPGHANADYAMYMLAMSQYKQRASAEKDPTQNKAAIKSFKKLIREHPDSSYAKQGK 137

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
            Y+    N LA  E+ IG++Y  R  YVAA  RFQ V+ +Y      EEA+  L  +Y  
Sbjct: 138 MYLQSLYNSLAKHELTIGKFYFDRDRYVAAANRFQQVIQHYQTTPSIEEALYYLASSYAK 197

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLV 270
           + +  +A +   L+Q  YP   W+   E  +
Sbjct: 198 MDMKTDASQTAQLLQHNYPHSSWSSKAERFL 228


>gi|94501302|ref|ZP_01307823.1| competence lipoprotein ComL, putative [Oceanobacter sp. RED65]
 gi|94426573|gb|EAT11560.1| competence lipoprotein ComL, putative [Oceanobacter sp. RED65]
          Length = 291

 Score = 95.9 bits (237), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 106/213 (49%), Gaps = 10/213 (4%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           +R +Y+KA+  +  +NF  A E   +    +PF   + ++ L     QY A   + A + 
Sbjct: 47  ERGIYDKAMEAIGNENFFLAIETLERLENRYPFGKYSEQAQLEMIHAQYQAQDLENARAT 106

Query: 117 GEEYITQYPESKNVDYVYYL-------VGMSYAQ---MIRDVPYDQRATKLMLQYMSRIV 166
            E +I  +P+   VDY YY+       +G+S  +      +   D    +     ++ ++
Sbjct: 107 AERFIRLHPQHPKVDYAYYMKALTTYELGLSLVERYFADEESQRDPSPAQESFNELAELI 166

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
           +R+ NS Y   AR  +   R+++A  E+ + RYYLKR  YVAA  R + V+ N+   +  
Sbjct: 167 KRFPNSEYAADARQRMIYLRDRIALHEIHVARYYLKRHAYVAAANRGRNVVENFQGTKQV 226

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           ++ +A +VEAY  L   D A + + +++  YP+
Sbjct: 227 DDGLAMMVEAYTLLGQKDLADKSLKVLKANYPE 259


>gi|253999418|ref|YP_003051481.1| outer membrane assembly lipoprotein YfiO [Methylovorus sp. SIP3-4]
 gi|253986097|gb|ACT50954.1| outer membrane assembly lipoprotein YfiO [Methylovorus sp. SIP3-4]
          Length = 268

 Score = 95.5 bits (236), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 106/224 (47%), Gaps = 14/224 (6%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           LD       QR +Y +A   ++ +++ KA +YF      +P    A ++ +   +  Y  
Sbjct: 25  LDETKGWSAQR-IYTEADEKMRSRDYEKAIKYFETLESRYPHGRFATQAQMDKIYAYYKR 83

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY-----------AQMIRDVPYDQRATK 156
                  +  + +I  +P+  N+DY YY+ G++             Q I D   D ++ +
Sbjct: 84  NDPISTIAAADRFIKLHPDHPNIDYAYYMKGLATFNERGVIEKLTKQQISD--RDPKSLR 141

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                +  +V RY NS YVK A   +T   + LA  E+ + RYY+KR  Y+A++ R + V
Sbjct: 142 ESFLALKELVTRYPNSRYVKDATLRMTYLVDMLANSELHVARYYMKRQAYLASVNRCKFV 201

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           L  Y D+   EEA+  ++ AY  + + D  ++ + ++Q  YP  
Sbjct: 202 LETYPDSPSVEEALVIMISAYDLMGMTDLKQDTLRVLQTNYPDS 245


>gi|262276887|ref|ZP_06054680.1| outer membrane assembly lipoprotein YfiO [alpha proteobacterium
           HIMB114]
 gi|262223990|gb|EEY74449.1| outer membrane assembly lipoprotein YfiO [alpha proteobacterium
           HIMB114]
          Length = 277

 Score = 95.1 bits (235), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 107/200 (53%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           N++++ E F +    + ++  A ++ LM  ++ Y +    Q     E++   Y   + + 
Sbjct: 51  NWTESVELFQKVETRYSYSEWAPRATLMILYIHYDSNDSIQTLRYVEKFKKLYSGREEIS 110

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
           YV ++  M++ + I  V  DQ  T++ L+    I+++Y NS Y K ++  + +   QLA 
Sbjct: 111 YVDFIRAMTFYEQINVVSKDQTYTEVALKEFREIIKKYPNSIYAKESKLKIDLILEQLAG 170

Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
           KE+ + RYY+ + ++++A+ R  +VL+ Y    ++ EA+ RLVE Y  L  ++EA++  +
Sbjct: 171 KEMYLARYYMNKNKWISALKRLNIVLSKYETTIYSTEALHRLVEIYYRLGNVNEAKKYAA 230

Query: 252 LIQERYPQGYWARYVETLVK 271
           L+   +    W +    +VK
Sbjct: 231 LLGYNFNDSDWYKKTYRIVK 250


>gi|182682371|ref|YP_001830531.1| competence lipoprotein [Xylella fastidiosa M23]
 gi|32130367|sp|Q87AR6|Y1756_XYLFT RecName: Full=UPF0169 lipoprotein PD_1756; Flags: Precursor
 gi|182632481|gb|ACB93257.1| competence lipoprotein [Xylella fastidiosa M23]
          Length = 293

 Score = 94.7 bits (234), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 121/256 (47%), Gaps = 25/256 (9%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
            + G  R++ ++   D    V +   +Y+KA   +K+ N++ A   F +    +P+    
Sbjct: 23  LITGCHRETKKNA--DDGMPVEH---LYDKAHTLMKKGNWAGAELSFKRLIAQYPYGPYT 77

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY--- 150
            ++++ +A+ QY +GK+  A S  + +I  YP   N+ Y+YYL G+S +   RD  +   
Sbjct: 78  EQAMVENAYAQYKSGKHDDAVSSIDRFIRTYPTHHNIPYMYYLRGLSNSN--RDTIFLRK 135

Query: 151 ---------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
                    D  A +        +++RY NS Y   A+  +T  RN  A  E+ +  YYL
Sbjct: 136 VWSLDLSRRDLSAPQQAYNDFKTVLDRYPNSRYATDAKKQMTELRNMFAQYEMNVTLYYL 195

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAREVVSLIQERYP 258
           +R  +VAA  R   +L  Y  +    +A+A L EAY  L    L D AR+V+      +P
Sbjct: 196 RRTAWVAAAGRANFLLETYPQSPFQYDAVAALGEAYTHLGNKTLADNARQVLQTNAPDHP 255

Query: 259 --QG-YWARYVETLVK 271
             +G  W +Y   + K
Sbjct: 256 WLKGKKWPKYPAAIRK 271


>gi|28199627|ref|NP_779941.1| hypothetical protein PD1756 [Xylella fastidiosa Temecula1]
 gi|28057742|gb|AAO29590.1| conserved hypothetical protein [Xylella fastidiosa Temecula1]
          Length = 298

 Score = 94.7 bits (234), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 121/256 (47%), Gaps = 25/256 (9%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
            + G  R++ ++   D    V +   +Y+KA   +K+ N++ A   F +    +P+    
Sbjct: 28  LITGCHRETKKNA--DDGMPVEH---LYDKAHTLMKKGNWAGAELSFKRLIAQYPYGPYT 82

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY--- 150
            ++++ +A+ QY +GK+  A S  + +I  YP   N+ Y+YYL G+S +   RD  +   
Sbjct: 83  EQAMVENAYAQYKSGKHDDAVSSIDRFIRTYPTHHNIPYMYYLRGLSNSN--RDTIFLRK 140

Query: 151 ---------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
                    D  A +        +++RY NS Y   A+  +T  RN  A  E+ +  YYL
Sbjct: 141 VWSLDLSRRDLSAPQQAYNDFKTVLDRYPNSRYATDAKKQMTELRNMFAQYEMNVTLYYL 200

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAREVVSLIQERYP 258
           +R  +VAA  R   +L  Y  +    +A+A L EAY  L    L D AR+V+      +P
Sbjct: 201 RRTAWVAAAGRANFLLETYPQSPFQYDAVAALGEAYTHLGNKTLADNARQVLQTNAPDHP 260

Query: 259 --QG-YWARYVETLVK 271
             +G  W +Y   + K
Sbjct: 261 WLKGKKWPKYPAAIRK 276


>gi|307578654|gb|ADN62623.1| competence lipoprotein [Xylella fastidiosa subsp. fastidiosa GB514]
          Length = 293

 Score = 94.7 bits (234), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 121/256 (47%), Gaps = 25/256 (9%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
            + G  R++ ++   D    V +   +Y+KA   +K+ N++ A   F +    +P+    
Sbjct: 23  LITGCHRETKKNA--DDGMPVEH---LYDKAHXLMKKGNWAGAELSFKRLIAQYPYGPYT 77

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY--- 150
            ++++ +A+ QY +GK+  A S  + +I  YP   N+ Y+YYL G+S +   RD  +   
Sbjct: 78  EQAMVENAYAQYKSGKHDDAVSSIDRFIRTYPTHHNIPYMYYLRGLSNSN--RDTIFLRK 135

Query: 151 ---------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
                    D  A +        +++RY NS Y   A+  +T  RN  A  E+ +  YYL
Sbjct: 136 VWSLDLSRRDLSAPQQAYNDFKTVLDRYPNSRYATDAKKQMTELRNMFAQYEMNVTLYYL 195

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAREVVSLIQERYP 258
           +R  +VAA  R   +L  Y  +    +A+A L EAY  L    L D AR+V+      +P
Sbjct: 196 RRTAWVAAAGRANFLLETYPQSPFQYDAVAALGEAYTHLGNKTLADNARQVLQTNAPDHP 255

Query: 259 --QG-YWARYVETLVK 271
             +G  W +Y   + K
Sbjct: 256 WLKGKKWPKYPAAIRK 271


>gi|313201440|ref|YP_004040098.1| outer membrane assembly lipoprotein yfio [Methylovorus sp. MP688]
 gi|312440756|gb|ADQ84862.1| outer membrane assembly lipoprotein YfiO [Methylovorus sp. MP688]
          Length = 268

 Score = 94.7 bits (234), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 106/224 (47%), Gaps = 14/224 (6%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           LD       QR +Y +A   ++ +++ KA +YF      +P    A ++ +   +  Y  
Sbjct: 25  LDETKGWSAQR-IYTEADEKMRSRDYEKAIKYFETLESRYPHGRFATQAQMDKIYAYYKR 83

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY-----------AQMIRDVPYDQRATK 156
                  +  + +I  +P+  N+DY YY+ G++             Q I D   D ++ +
Sbjct: 84  NDPISTIAAADRFIKLHPDHPNIDYAYYMKGLATFNERGVIEKLTKQQISD--RDPKSLR 141

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                +  +V RY NS YVK A   +T   + LA  E+ + RYY+KR  Y+A++ R + V
Sbjct: 142 ESFLALKELVTRYPNSRYVKDATLRMTYLVDMLANSELHVARYYMKRQAYLASVNRCKFV 201

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           L  Y D+   EEA+  ++ AY  + + D  ++ + ++Q  YP  
Sbjct: 202 LETYPDSPSVEEALVIMISAYDLMGMDDLKQDTLRVLQTNYPDS 245


>gi|192359694|ref|YP_001983660.1| competence protein ComL [Cellvibrio japonicus Ueda107]
 gi|190685859|gb|ACE83537.1| competence protein ComL [Cellvibrio japonicus Ueda107]
          Length = 327

 Score = 94.7 bits (234), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 106/216 (49%), Gaps = 10/216 (4%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
           V  + ++Y+ A   L    +  A +       +FPF   A ++ L   +  Y +G+   A
Sbjct: 53  VTTEADLYQAAERQLNNSQWQTAIKNLQTLEENFPFGTYAEQAQLELIYAYYMSGEPDAA 112

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSY-----AQMIRDVPYD-----QRATKLMLQYMS 163
            +    +I  +P+ +NVDY YY++GMS          R +P D       A +  L   +
Sbjct: 113 IATANRFIRLHPQHRNVDYAYYMLGMSSFTKDKGMFERVLPVDITRRDPGAARESLANFT 172

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
           +++ RY +S Y   A+  +   RN LA  E+ +  YY KRG Y+AA+ R + VL N+   
Sbjct: 173 QLLNRYPDSAYAADAKKRMLFLRNLLARYEIHVANYYFKRGAYIAAVGRGRYVLENFPKT 232

Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
               +A+A +V+ Y  +++  +A E++ +++  YP 
Sbjct: 233 PAIPDALAVMVQGYRLMSMSTQADEMLEILRTNYPN 268


>gi|71276442|ref|ZP_00652718.1| putative lipoprotein [Xylella fastidiosa Dixon]
 gi|71901553|ref|ZP_00683636.1| putative lipoprotein [Xylella fastidiosa Ann-1]
 gi|170730992|ref|YP_001776425.1| putative lipoprotein [Xylella fastidiosa M12]
 gi|71162758|gb|EAO12484.1| putative lipoprotein [Xylella fastidiosa Dixon]
 gi|71728677|gb|EAO30825.1| putative lipoprotein [Xylella fastidiosa Ann-1]
 gi|167965785|gb|ACA12795.1| putative lipoprotein [Xylella fastidiosa M12]
          Length = 293

 Score = 94.4 bits (233), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 121/256 (47%), Gaps = 25/256 (9%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
            + G  R++ ++   D    V +   +Y+KA   +K+ N++ A   F +    +P+    
Sbjct: 23  LITGCHRETKKNA--DDGMPVEH---LYDKAHTLMKKGNWAGAEVSFKRLIAQYPYGPYT 77

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY--- 150
            ++++ +A+ QY +GK+  A S  + +I  YP   N+ Y+YYL G+S +   RD  +   
Sbjct: 78  EQAMVENAYAQYKSGKHDDAVSSIDRFIRTYPTHHNIPYMYYLRGLSNSN--RDTIFLRK 135

Query: 151 ---------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
                    D  A +        +++RY NS Y   A+  +T  RN  A  E+ +  YYL
Sbjct: 136 VWSLDLSRRDLSAPQQAYNDFKTVLDRYPNSRYAADAKKQMTELRNMFAQYEMNVTLYYL 195

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAREVVSLIQERYP 258
           +R  +VAA  R   +L  Y  +    +A+A L EAY  L    L D AR+V+      +P
Sbjct: 196 RRTAWVAAAGRANFLLETYPQSPFQYDAVAALGEAYTHLGNKTLADNARQVLQTNAPDHP 255

Query: 259 --QG-YWARYVETLVK 271
             +G  W +Y   + K
Sbjct: 256 WLKGKKWPKYPAAIRK 271


>gi|241763388|ref|ZP_04761443.1| outer membrane assembly lipoprotein YfiO [Acidovorax delafieldii
           2AN]
 gi|241367430|gb|EER61741.1| outer membrane assembly lipoprotein YfiO [Acidovorax delafieldii
           2AN]
          Length = 265

 Score = 94.4 bits (233), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 104/215 (48%), Gaps = 10/215 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y +A   L    F KA     +         +A+++ L  A+ QY  G+  QA +  + 
Sbjct: 37  IYSEAKDELGSGAFDKAVPLLEKLEGRAAGTPLAQQAQLDKAYAQYKGGEKAQAIATLDR 96

Query: 120 YITQYPESKNVDYVYYLVGM----------SYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           +I  +P S  +DY  YL G+          S+         DQ+A K   + +S +V R+
Sbjct: 97  FIKLHPASPALDYALYLKGLVNFNDNLGLFSWVSQQDLSERDQKAAKDSFESLSELVTRF 156

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
            +S Y K AR  +T   N LA  EV + RYY +RG YVAAI R Q  LA+Y      EEA
Sbjct: 157 PDSRYAKDARQRMTYIVNSLAQYEVHVARYYYERGAYVAAIGRAQSALADYQGVPALEEA 216

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
           +  L+++Y AL +     +   +++  YPQG  A+
Sbjct: 217 LYILMQSYDALGMTQLRDDTRRVMEASYPQGALAK 251


>gi|254517172|ref|ZP_05129230.1| competence protein ComL [gamma proteobacterium NOR5-3]
 gi|219674677|gb|EED31045.1| competence protein ComL [gamma proteobacterium NOR5-3]
          Length = 280

 Score = 94.4 bits (233), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 10/213 (4%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           ++++Y++A  +L  +NF  A          +PF   A ++ L   +  Y A   + A   
Sbjct: 21  EQQIYDEAQRYLNARNFDLAIRALQALESRYPFGRYAEQAQLELIYAHYGAYSPEAAIEA 80

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRD-----VPYDQ--RAT---KLMLQYMSRIV 166
            + +I  +P+  NVDY YY+ G++ A   +D      P D+  R T   K      S++V
Sbjct: 81  ADRFIRLHPQHPNVDYAYYMKGLATATASQDFLSRFTPTDKTLRDTSFAKEAFAEFSQLV 140

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
            R+ NSPY   A+  +   RN LA  E+ +  YY +RG Y+AA  R + V+ N+      
Sbjct: 141 TRFPNSPYASDAKSRMVYLRNLLARNEIHVANYYFRRGAYLAAANRGRYVVENFQGTPAV 200

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            + +A + + Y+ L + D A+  +  +   YP+
Sbjct: 201 GDGLAVMAQGYLILGMNDLAQNAIDTLALNYPE 233


>gi|83648562|ref|YP_436997.1| DNA uptake lipoprotein [Hahella chejuensis KCTC 2396]
 gi|83636605|gb|ABC32572.1| DNA uptake lipoprotein [Hahella chejuensis KCTC 2396]
          Length = 275

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 10/213 (4%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           ++E Y+KA   L   NF +A  +        PF   A ++ L   +  Y++   ++A S 
Sbjct: 29  EKEYYDKAKSALDSGNFLEAARHLEDLETYHPFGRYAEQAQLDLIYAHYNSLNPERAESA 88

Query: 117 GEEYITQYPESKNVDYVYYLVGMS--YAQM---IRDVPYDQRA-----TKLMLQYMSRIV 166
            E +I  +PES +VDY YY+ G++  YA +    R +P D  +      K   +  S +V
Sbjct: 89  AERFIRLHPESPHVDYAYYIKGLAAYYADLGLGPRFLPIDVNSRDPGRAKEAFRDFSTLV 148

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
             + +SPY   A   +   + +LA  E+ + RYY++R  YVAA+ R Q V+ NY D    
Sbjct: 149 TNFPDSPYAADAEKRMLAIKERLAQYEMHVARYYIRRQAYVAAVARAQYVVENYPDTPVV 208

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            EA++ +VE Y  L +   A + + L+   YP 
Sbjct: 209 PEALSLMVELYRYLGMQRHADDALVLLAASYPD 241


>gi|254281628|ref|ZP_04956596.1| competence protein ComL [gamma proteobacterium NOR51-B]
 gi|219677831|gb|EED34180.1| competence protein ComL [gamma proteobacterium NOR51-B]
          Length = 307

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 102/213 (47%), Gaps = 10/213 (4%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           ++++Y +A  +L+  +F  A          +PF   A ++ L   F  Y   +++ A   
Sbjct: 48  EQQIYLEAQRYLENDSFDLAIRTLQMLESRYPFGRYAEQAQLELVFAHYGGREFEAAIEA 107

Query: 117 GEEYITQYPESKNVDYVYYLVGMS--------YAQMI--RDVPYDQRATKLMLQYMSRIV 166
              +I  +P+  NVDY YY+ G++         A ++   D   D    K  L   ++++
Sbjct: 108 ANRFIRLHPQHPNVDYAYYMKGLAAYDIDGGFLASLVPTDDTKRDVGHMKEALAEFAQLL 167

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
            R+ +SPY   AR  +   RN LA  E+ +  YY +RG Y+AA+ R + V+ N       
Sbjct: 168 ARFPDSPYAPDARLRMVHLRNMLARHEIHVANYYFRRGAYMAALNRGRYVVENLEQTPSV 227

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            + +A + +AY+ L L D A + + +++  YP 
Sbjct: 228 ADGLAIMAQAYLLLGLDDLAIDTIEVLKANYPN 260


>gi|71082726|ref|YP_265445.1| putative competence lipoprotein ComL [Candidatus Pelagibacter
           ubique HTCC1062]
 gi|71061839|gb|AAZ20842.1| putative competence lipoprotein ComL [Candidatus Pelagibacter
           ubique HTCC1062]
          Length = 282

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 99/183 (54%)

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
           FN+    FP +  A KS +M+A+  Y+   Y  A    E Y+  YP  K+  Y ++L+GM
Sbjct: 62  FNEAELLFPQSPWAAKSAIMAAYAYYTQYYYSDAIFELERYLVTYPNHKDKVYAHFLLGM 121

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           S+ + I D   D ++     +    I+  Y ++ +   A+F + +    LAAKE+ I RY
Sbjct: 122 SFYEQIVDEKKDLKSILDSKEQFETIIRDYPSTEFAMDAKFKIDLINEILAAKEMYIARY 181

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           YLK+ +++ A+ RF+ V+ +Y+   + EEA+ RLVE    L L++E+++  S +   Y  
Sbjct: 182 YLKKTKWIPALNRFKTVVKDYNTTIYTEEALHRLVEINYRLGLINESKKYASTLGYNYQS 241

Query: 260 GYW 262
             W
Sbjct: 242 SDW 244


>gi|148285105|ref|YP_001249195.1| TPR repeat-containing protein [Orientia tsutsugamushi str. Boryong]
 gi|146740544|emb|CAM81139.1| tetratricopeptide repeat protein with 1 trp repeats [Orientia
           tsutsugamushi str. Boryong]
          Length = 264

 Score = 93.2 bits (230), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 129/256 (50%), Gaps = 12/256 (4%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
            +++F  T+F  +     + + ++ +   YL        + + Y +A L  +++ ++ A 
Sbjct: 13  NMFRFICTLFVLLCFTNCIIFAKEKTIITYLS-------EDDAYSRAELLFQKKKYNAAA 65

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           + F         +  A K+ LM  +  Y AG+Y +A+ + + +I  +P  + +  VYYL 
Sbjct: 66  KQFFDIFVQHLGSNTATKAELMQGYSLYLAGQYSEASEVLDNFIRLHPVHQKIADVYYLK 125

Query: 138 GMS-YAQMIRDVPYDQR-ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
            ++ Y Q       +Q    KL LQ   ++++++  S +   A+  + V    LA+ +++
Sbjct: 126 ALAEYKQAHNQQDLEQLLHAKLALQ---QVIDKFPKSDFAVKAKEKINVISKNLASSQID 182

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           IG++YL +   +AA+ RF  V+  YS   +  EA+ R+ ++Y  L    E +E ++++  
Sbjct: 183 IGKFYLNKKNPIAALNRFNTVVDKYSHTSYYPEAIYRIAQSYALLGRKQEMKEQLAILNI 242

Query: 256 RYPQGYWARYVETLVK 271
           ++P G W++   +L++
Sbjct: 243 KFPNGTWSKRASSLLQ 258


>gi|58581219|ref|YP_200235.1| competence lipoprotein [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84623137|ref|YP_450509.1| competence lipoprotein [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|58425813|gb|AAW74850.1| competence lipoprotein [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84367077|dbj|BAE68235.1| competence lipoprotein [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 293

 Score = 92.0 bits (227), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 120/260 (46%), Gaps = 22/260 (8%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           A  I   + + F+V    + ++D   D    V    ++Y KA   +++ N++ A   F  
Sbjct: 11  ARLIALMLVMAFVVTGCHRGAKDKNPDEGMPVE---QLYGKAHNLMEKGNWAGAEASFKH 67

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
               +P+     ++++ SA+ QY AGK+    S  + +I  YP  +N+ Y+YYL G+  A
Sbjct: 68  LIAQYPYGPYTEQAMIESAYAQYKAGKHDDTVSSVDRFIRTYPTHRNIAYLYYLRGL--A 125

Query: 143 QMIRDVPY------------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
              RD  +            D  + +      + + +RY NS Y   AR  +   R+  A
Sbjct: 126 NSNRDTVFLRHVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAADARKRMIELRDVFA 185

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAR 247
             E++   YYL+R  +V+A  R   +L  Y  + +  +A+A L EAY  L    L  +AR
Sbjct: 186 QHELDNALYYLRRDAWVSAAGRANYLLETYPQSAYQYDAVAVLAEAYTHLGNKTLAADAR 245

Query: 248 EVVSLIQERYP--QGYWARY 265
            V+ L   ++P   G W +Y
Sbjct: 246 RVLELNDPKHPWLTGNWPKY 265


>gi|330962680|gb|EGH62940.1| competence lipoprotein ComL [Pseudomonas syringae pv. maculicola
           str. ES4326]
          Length = 340

 Score = 92.0 bits (227), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 115/228 (50%), Gaps = 14/228 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           SS++V  +++++V    E+Y++A   L   +++ A E        +PF   A ++ L   
Sbjct: 19  SSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLELI 74

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR--- 153
           +  Y  G+ + A S  E +I  +P+  NVDY YY+ G+ S+ Q    + R +P DQ    
Sbjct: 75  YSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKRD 134

Query: 154 --ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
             A +      +++  RY NS Y   A+  +   RN LA+ E+ +  YYL R  YVAA  
Sbjct: 135 PGAARDSFNEFAQLTSRYPNSRYAPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAAN 194

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           R + V+ N+ +     + +A +VE+Y  L L D A   + +++  YP 
Sbjct: 195 RGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242


>gi|15603585|ref|NP_246659.1| hypothetical protein PM1720 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|18202811|sp|Q9CKA5|Y1720_PASMU RecName: Full=UPF0169 lipoprotein PM1720; Flags: Precursor
 gi|12722132|gb|AAK03804.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 260

 Score = 92.0 bits (227), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 113/245 (46%), Gaps = 23/245 (9%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           + F     F+I  C         S+DV      + R ++E+Y      L+  ++S+A  Y
Sbjct: 7   FTFIALTAFAITAC-------SGSKDV------EQRPEQELYNVGQTHLQNGDYSQAIRY 53

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
            +     FP +  + ++LL   +  Y    Y Q   L + +  QYP S+N+DYV Y+ G+
Sbjct: 54  LDAVRSRFPGSSYSEQTLLNLIYANYKTQDYTQTLVLADRFFQQYPTSRNLDYVLYMAGL 113

Query: 140 SYAQM----IRDVPYDQRAT------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
           + A +    I+D+    RAT      K        +V+ + NSPY + A   +   +  L
Sbjct: 114 TNAALGDNYIQDLFRIDRATRESSSIKAAFANFQTLVQNFPNSPYAQDALARMAYIKASL 173

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           A  E+ I ++Y KR  +VA   R   +L  Y D +   EA+  + EAY  + L D A + 
Sbjct: 174 ARHELAIAKFYAKRDAHVAVANRVVGMLQQYPDTQATYEALPLMQEAYEKMNLNDLAAKT 233

Query: 250 VSLIQ 254
            ++I+
Sbjct: 234 AAIIE 238


>gi|166713129|ref|ZP_02244336.1| competence lipoprotein [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 293

 Score = 92.0 bits (227), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 121/260 (46%), Gaps = 22/260 (8%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           A  I   + + F+V    + ++D   D    V    ++Y KA   +++ N++ A   F +
Sbjct: 11  ARLIALMLVMAFVVTGCHRGAKDKNPDEGMPVE---QLYGKAHNLMEKGNWAGAEASFKR 67

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
               +P+     ++++ SA+ QY AGK+    S  + +I  YP  +N+ Y+YYL G+  A
Sbjct: 68  LIAQYPYGPYTEQAMIESAYAQYKAGKHDDTVSSVDRFIRTYPTHRNIAYLYYLRGL--A 125

Query: 143 QMIRDVPY------------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
              RD  +            D  + +      + + +RY NS Y   AR  +   R+  A
Sbjct: 126 NSNRDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAADARKRMIELRDVFA 185

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAR 247
             E++   YYL+R  +V+A  R   +L  Y  + +  +A+A L EAY  L    L  +AR
Sbjct: 186 QHELDDALYYLRRDAWVSAAGRANYLLETYPQSAYQYDAVAVLAEAYTHLGNKTLAADAR 245

Query: 248 EVVSLIQERYP--QGYWARY 265
            V+ L   ++P   G W +Y
Sbjct: 246 RVLELNDPKHPWLTGNWPKY 265


>gi|330878988|gb|EGH13137.1| competence lipoprotein ComL [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 340

 Score = 92.0 bits (227), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 115/228 (50%), Gaps = 14/228 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           SS++V  +++++V    E+Y++A   L   +++ A E        +PF   A ++ L   
Sbjct: 19  SSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLELI 74

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR--- 153
           +  Y  G+ + A S  E +I  +P+  NVDY YY+ G+ S+ Q    + R +P DQ    
Sbjct: 75  YSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKRD 134

Query: 154 --ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
             A +      +++  RY NS Y   A+  +   RN LA+ E+ +  YYL R  YVAA  
Sbjct: 135 PGAARDSFNEFAQLTSRYPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAAN 194

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           R + V+ N+ +     + +A +VE+Y  L L D A   + +++  YP 
Sbjct: 195 RGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242


>gi|254490941|ref|ZP_05104123.1| outer membrane assembly lipoprotein YfiO [Methylophaga thiooxidans
           DMS010]
 gi|224463850|gb|EEF80117.1| outer membrane assembly lipoprotein YfiO [Methylophaga thiooxydans
           DMS010]
          Length = 261

 Score = 91.7 bits (226), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 103/211 (48%), Gaps = 14/211 (6%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           VY +A   L   ++  A  Y+ Q    FPF   A+++LL SA+  Y     + A +  + 
Sbjct: 39  VYSEANAALTLGDYETAITYYEQLEARFPFGEYAQQALLESAYAHYKNDDPETAIATLDR 98

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPY------------DQRATKLMLQYMSRIVE 167
           ++  YP + N+DY  YL G++     RD+ +            D  A +  L+    +V 
Sbjct: 99  FMRVYPLNPNIDYAIYLRGLT--SFHRDIGFFEKYIPRDESQRDPGAAEDALRDFKTLVT 156

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
           R+  S Y + +   +   RN+LA  EV +  YY++RG Y+AA  R + VL NY       
Sbjct: 157 RFPQSRYAEDSTQRIVYLRNRLAQHEVNVANYYMRRGSYIAAANRGKYVLENYPRTPSMP 216

Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYP 258
           EA+  + +AY  L + D +++ + +++  YP
Sbjct: 217 EALVVMAKAYKVLDMHDLSQDALRVLELNYP 247


>gi|213971043|ref|ZP_03399163.1| competence lipoprotein ComL [Pseudomonas syringae pv. tomato T1]
 gi|301384234|ref|ZP_07232652.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
           tomato Max13]
 gi|302059467|ref|ZP_07251008.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
           tomato K40]
 gi|302134991|ref|ZP_07260981.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
           tomato NCPPB 1108]
 gi|213924151|gb|EEB57726.1| competence lipoprotein ComL [Pseudomonas syringae pv. tomato T1]
 gi|331018388|gb|EGH98444.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 340

 Score = 91.7 bits (226), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 115/228 (50%), Gaps = 14/228 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           SS++V  +++++V    E+Y++A   L   +++ A E        +PF   A ++ L   
Sbjct: 19  SSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLELI 74

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR--- 153
           +  Y  G+ + A S  E +I  +P+  NVDY YY+ G+ S+ Q    + R +P DQ    
Sbjct: 75  YSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKRD 134

Query: 154 --ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
             A +      +++  RY NS Y   A+  +   RN LA+ E+ +  YYL R  YVAA  
Sbjct: 135 PGAARDSFNEFAQLTSRYPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAAN 194

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           R + V+ N+ +     + +A +VE+Y  L L D A   + +++  YP 
Sbjct: 195 RGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242


>gi|330966363|gb|EGH66623.1| competence lipoprotein ComL [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 340

 Score = 91.7 bits (226), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 115/228 (50%), Gaps = 14/228 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           SS++V  +++++V    E+Y++A   L   +++ A E        +PF   A ++ L   
Sbjct: 19  SSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLELI 74

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR--- 153
           +  Y  G+ + A S  E +I  +P+  NVDY YY+ G+ S+ Q    + R +P DQ    
Sbjct: 75  YSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKRD 134

Query: 154 --ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
             A +      +++  RY NS Y   A+  +   RN LA+ E+ +  YYL R  YVAA  
Sbjct: 135 PGAARDSFNEFAQLTSRYPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAAN 194

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           R + V+ N+ +     + +A +VE+Y  L L D A   + +++  YP 
Sbjct: 195 RGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242


>gi|119505581|ref|ZP_01627652.1| competence protein ComL [marine gamma proteobacterium HTCC2080]
 gi|119458524|gb|EAW39628.1| competence protein ComL [marine gamma proteobacterium HTCC2080]
          Length = 336

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 10/213 (4%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           ++++Y +A   L   NF+ A          +PF   A ++ L   +  Y A +++ A   
Sbjct: 78  EQQIYLEAQRSLDSGNFNTAIRTLQLLESRYPFGRYAEQAQLELVYAHYGAYEFEAAIEA 137

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIV 166
            + +I  +P+  NVDY YY+ G+S   M            D   D    K      ++++
Sbjct: 138 ADRFIRLHPQHPNVDYAYYMKGLSAFDMEGGFLASFVPTDDTKRDVSHIKEAFAEFAQLL 197

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
            R+ +S Y   AR  +   RN LA  EV +  YY +RG Y+AA+ R + V+ +       
Sbjct: 198 ARFPDSAYAPDARARMVHMRNMLARHEVHVANYYFRRGAYMAALNRGRYVVEHMQQTPSV 257

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            + +A + +AY+ L   D A++ ++++ E +P 
Sbjct: 258 ADGLAIMAQAYILLDFNDLAKDSIAVLHENFPD 290


>gi|28868054|ref|NP_790673.1| competence lipoprotein ComL [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|28851290|gb|AAO54368.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
           tomato str. DC3000]
          Length = 338

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 115/228 (50%), Gaps = 14/228 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           SS++V  +++++V    E+Y++A   L   +++ A E        +PF   A ++ L   
Sbjct: 17  SSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLELI 72

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR--- 153
           +  Y  G+ + A S  E +I  +P+  NVDY YY+ G+ S+ Q    + R +P DQ    
Sbjct: 73  YSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKRD 132

Query: 154 --ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
             A +      +++  RY NS Y   A+  +   RN LA+ E+ +  YYL R  YVAA  
Sbjct: 133 PGAARDSFNEFAQLTSRYPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAAN 192

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           R + V+ N+ +     + +A +VE+Y  L L D A   + +++  YP 
Sbjct: 193 RGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 240


>gi|330977499|gb|EGH77445.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 256

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 115/228 (50%), Gaps = 14/228 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           SS++V  +++++V    E+Y++A   L   +++ A E        +PF   A ++ L   
Sbjct: 19  SSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLELI 74

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR--- 153
           +  Y  G+ + A S  E +I  +P+  NVDY YY+ G+ S+ Q    + R +P DQ    
Sbjct: 75  YSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKRD 134

Query: 154 --ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
             A +      +++  R+ NS Y   A+  +   RN LA+ E+ +  YYL R  YVAA  
Sbjct: 135 PGAARDSFNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAAN 194

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           R + V+ N+ +     + +A +VE+Y  L L D A   + +++  YP 
Sbjct: 195 RGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242


>gi|257481619|ref|ZP_05635660.1| competence lipoprotein ComL [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 266

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 115/228 (50%), Gaps = 14/228 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           SS++V  +++++V    E+Y++A   L   +++ A E        +PF   A ++ L   
Sbjct: 19  SSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLELI 74

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR--- 153
           +  Y  G+ + A S  E +I  +P+  NVDY YY+ G+ S+ Q    + R +P DQ    
Sbjct: 75  YSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKRD 134

Query: 154 --ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
             A +      +++  R+ NS Y   A+  +   RN LA+ E+ +  YYL R  YVAA  
Sbjct: 135 PGAARDSFNEFAQLTSRFPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAAN 194

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           R + V+ N+ +     + +A +VE+Y  L L D A   + +++  YP 
Sbjct: 195 RGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242


>gi|188575740|ref|YP_001912669.1| competence lipoprotein [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188520192|gb|ACD58137.1| competence lipoprotein [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 277

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 118/253 (46%), Gaps = 22/253 (8%)

Query: 30  IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
           + + F+V    + ++D   D    V    ++Y KA   +++ N++ A   F      +P+
Sbjct: 2   LVMAFVVTGCHRGAKDKNPDEGMPVE---QLYGKAHNLMEKGNWAGAEASFKHLIAQYPY 58

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
                ++++ SA+ QY AGK+    S  + +I  YP  +N+ Y+YYL G+  A   RD  
Sbjct: 59  GPYTEQAMIESAYAQYKAGKHDDTVSSVDRFIRTYPTHRNIAYLYYLRGL--ANSNRDTV 116

Query: 150 Y------------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
           +            D  + +      + + +RY NS Y   AR  +   R+  A  E++  
Sbjct: 117 FLRHVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAADARKRMIELRDVFAQHELDNA 176

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAREVVSLIQ 254
            YYL+R  +V+A  R   +L  Y  + +  +A+A L EAY  L    L  +AR V+ L  
Sbjct: 177 LYYLRRDAWVSAAGRANYLLETYPQSAYQYDAVAVLAEAYTHLGNKTLAADARRVLELND 236

Query: 255 ERYP--QGYWARY 265
            ++P   G W +Y
Sbjct: 237 PKHPWLTGNWPKY 249


>gi|297183891|gb|ADI20013.1| DNA uptake lipoprotein [uncultured gamma proteobacterium
           EB000_65A11]
          Length = 285

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 112/243 (46%), Gaps = 19/243 (7%)

Query: 30  IAVCFLVGWERQSSRDVYLD-SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
           +++ FL G     + +   D   T++ Y    Y+ +   L+  N+  A E        FP
Sbjct: 16  LSLIFLAGCSSDKAEEGEEDIDATELEY----YKMSQSALRSGNYQTAVERLQFLEARFP 71

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
           F   A ++ L   +  Y + + + A +  + +I  +P+  NVDY YYL GM  A    D 
Sbjct: 72  FGRYAEQAQLEIIYAYYKSAQSESARAAADRFIRLHPQHPNVDYAYYLRGM--ASFDEDT 129

Query: 149 PY------------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
            +            D  A +      S++++R+ NS Y   A++ +   RN LA  E+ +
Sbjct: 130 NFLEKFIPMNAATRDPGAARDSFNDFSQLIKRFPNSQYAPDAQYRMIYLRNLLAEYEINV 189

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            RYY+ RG Y+AA  R + V  N+ +     + +A +VEAY  L +   A E + ++ E 
Sbjct: 190 ARYYIYRGAYIAAANRGRHVFENFQETPSVPDGLAIMVEAYTLLNMETLASEALMVLSEN 249

Query: 257 YPQ 259
           +P 
Sbjct: 250 FPD 252


>gi|90417172|ref|ZP_01225099.1| competence lipoprotein ComL, putative [marine gamma proteobacterium
           HTCC2207]
 gi|90330948|gb|EAS46209.1| competence lipoprotein ComL, putative [marine gamma proteobacterium
           HTCC2207]
          Length = 330

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 101/237 (42%), Gaps = 14/237 (5%)

Query: 33  CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
           C  +GW  + S +      T+V +    YEK    L   N+S A          FPF   
Sbjct: 19  CSWLGWGEEESTEDETSGYTEVDF----YEKIQSSLNASNWSVAISNLELLESQFPFGKY 74

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD----- 147
           A ++ L   + Q+  G +  + +  + +I  +P+  NVDY +Y+ G+S            
Sbjct: 75  AEQAQLELMYAQFKTGDHDSSIAAADRFIRLHPQHPNVDYAFYVKGLSEVSQATSAFDNF 134

Query: 148 VPYDQR-----ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
           +P D         +      S ++ R+  SPY   AR  +   RNQL   E+ +  YY  
Sbjct: 135 LPTDNSRRDIGTARDAFGTFSELLNRFPKSPYAPDARKRLVNLRNQLGRAEIHVANYYFS 194

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           RG Y+AA  R + V+ N+       + +A + + Y  L + + +   V ++   YP+
Sbjct: 195 RGAYLAAANRGRFVVENFQQTPAVPDGLAVMAQGYQMLGMQELSDHAVEVLAANYPE 251


>gi|332283690|ref|YP_004415601.1| competence lipoprotein precursor [Pusillimonas sp. T7-7]
 gi|330427643|gb|AEC18977.1| competence lipoprotein precursor [Pusillimonas sp. T7-7]
          Length = 258

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 108/228 (47%), Gaps = 11/228 (4%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
            S  V  D  T    +R +Y+ A   +   N++ A          +PF G A+++L+  A
Sbjct: 10  GSTKVEKDPTTGWSAER-LYQDARAEISAGNWNDARTRLEAIEARYPFGGYAQQALIDQA 68

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM--------SYAQMIRDVPYDQR 153
           +V +  G+ +QA +  + +  QYP     DY+ YL G+        S+  + R  P ++ 
Sbjct: 69  YVNWKDGEPEQALAAIDRFQQQYPNHPGTDYMLYLKGLVTFTPPSASFTNITRQDPSERD 128

Query: 154 ATKLMLQYMS--RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
              L   Y S   ++ RY +S Y   A+  VT   N +A  EV +  YY +RG YVAAI 
Sbjct: 129 PKGLRESYDSFNELIARYPDSRYTADAKKRVTWLVNTIAQNEVHVATYYYERGAYVAAIN 188

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           R Q V+ ++     +E+A+  +V AY  L L +   +   ++ E +P 
Sbjct: 189 RAQTVVTDFQGVPASEKALYIMVLAYDKLQLPELRDDAKRVLDENFPN 236


>gi|66043990|ref|YP_233831.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
           syringae B728a]
 gi|63254697|gb|AAY35793.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
           syringae B728a]
 gi|330954254|gb|EGH54514.1| competence lipoprotein ComL, putative [Pseudomonas syringae Cit 7]
          Length = 340

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 115/228 (50%), Gaps = 14/228 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           SS++V  +++++V    E+Y++A   L   +++ A E        +PF   A ++ L   
Sbjct: 19  SSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLELI 74

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR--- 153
           +  Y  G+ + A S  E +I  +P+  NVDY YY+ G+ S+ Q    + R +P DQ    
Sbjct: 75  YSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKRD 134

Query: 154 --ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
             A +      +++  R+ NS Y   A+  +   RN LA+ E+ +  YYL R  YVAA  
Sbjct: 135 PGAARDSFNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAAN 194

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           R + V+ N+ +     + +A +VE+Y  L L D A   + +++  YP 
Sbjct: 195 RGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242


>gi|289674869|ref|ZP_06495759.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
           syringae FF5]
 gi|330941211|gb|EGH44079.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
           pisi str. 1704B]
          Length = 340

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 115/228 (50%), Gaps = 14/228 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           SS++V  +++++V    E+Y++A   L   +++ A E        +PF   A ++ L   
Sbjct: 19  SSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLELI 74

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR--- 153
           +  Y  G+ + A S  E +I  +P+  NVDY YY+ G+ S+ Q    + R +P DQ    
Sbjct: 75  YSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKRD 134

Query: 154 --ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
             A +      +++  R+ NS Y   A+  +   RN LA+ E+ +  YYL R  YVAA  
Sbjct: 135 PGAARDSFNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAAN 194

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           R + V+ N+ +     + +A +VE+Y  L L D A   + +++  YP 
Sbjct: 195 RGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242


>gi|237801869|ref|ZP_04590330.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331024727|gb|EGI04783.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 340

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 115/228 (50%), Gaps = 14/228 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           SS++V  +++++V    E+Y++A   L   +++ A E        +PF   A ++ L   
Sbjct: 19  SSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLELI 74

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR--- 153
           +  Y  G+ + A S  E +I  +P+  NVDY YY+ G+ S+ Q    + R +P DQ    
Sbjct: 75  YSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKRD 134

Query: 154 --ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
             A +      +++  R+ NS Y   A+  +   RN LA+ E+ +  YYL R  YVAA  
Sbjct: 135 PGAARDSFNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAAN 194

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           R + V+ N+ +     + +A +VE+Y  L L D A   + +++  YP 
Sbjct: 195 RGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242


>gi|302185254|ref|ZP_07261927.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
           syringae 642]
          Length = 340

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 115/228 (50%), Gaps = 14/228 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           SS++V  +++++V    E+Y++A   L   +++ A E        +PF   A ++ L   
Sbjct: 19  SSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLELI 74

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR--- 153
           +  Y  G+ + A S  E +I  +P+  NVDY YY+ G+ S+ Q    + R +P DQ    
Sbjct: 75  YSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKRD 134

Query: 154 --ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
             A +      +++  R+ NS Y   A+  +   RN LA+ E+ +  YYL R  YVAA  
Sbjct: 135 PGAARDSFNEFAQLTSRFPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAAN 194

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           R + V+ N+ +     + +A +VE+Y  L L D A   + +++  YP 
Sbjct: 195 RGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242


>gi|71736201|ref|YP_273031.1| competence lipoprotein ComL [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|289626966|ref|ZP_06459920.1| competence lipoprotein ComL [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289651378|ref|ZP_06482721.1| competence lipoprotein ComL [Pseudomonas syringae pv. aesculi str.
           2250]
 gi|71556754|gb|AAZ35965.1| competence lipoprotein ComL [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|330869190|gb|EGH03899.1| competence lipoprotein ComL [Pseudomonas syringae pv. aesculi str.
           0893_23]
 gi|330891574|gb|EGH24235.1| competence lipoprotein ComL [Pseudomonas syringae pv. mori str.
           301020]
 gi|330988805|gb|EGH86908.1| competence lipoprotein ComL [Pseudomonas syringae pv. lachrymans
           str. M301315]
          Length = 340

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 115/228 (50%), Gaps = 14/228 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           SS++V  +++++V    E+Y++A   L   +++ A E        +PF   A ++ L   
Sbjct: 19  SSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLELI 74

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR--- 153
           +  Y  G+ + A S  E +I  +P+  NVDY YY+ G+ S+ Q    + R +P DQ    
Sbjct: 75  YSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKRD 134

Query: 154 --ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
             A +      +++  R+ NS Y   A+  +   RN LA+ E+ +  YYL R  YVAA  
Sbjct: 135 PGAARDSFNEFAQLTSRFPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAAN 194

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           R + V+ N+ +     + +A +VE+Y  L L D A   + +++  YP 
Sbjct: 195 RGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242


>gi|330721663|gb|EGG99674.1| putative component of the lipoprotein assembly complex (forms a
           complex with YaeT2C YfgL2C and NlpB) [gamma
           proteobacterium IMCC2047]
          Length = 286

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 114/250 (45%), Gaps = 20/250 (8%)

Query: 23  ALTIFFSIAVCF---LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           +L I  S+ VC    L G      R+   +S T        +E A+   K  N+S A E 
Sbjct: 5   SLKILASL-VCLALLLTGCSSNDKREFTENSET------AFFENAMKASKAGNYSTAIEL 57

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
             +    +PF   ++++ L   F  Y +  Y+ + +    +I  +P+   +DYVYYL G+
Sbjct: 58  LEELESRYPFGRYSQQAQLELIFAYYKSADYESSRATSSRFIRLHPQHLKLDYVYYLKGL 117

Query: 140 SYAQMIRD-------VPYDQR---ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
           +  Q  +D       +   QR   A +  L     ++ R+ +S Y   AR  +   RNQL
Sbjct: 118 ASYQQDKDFFDRFLNIETSQRDMGAARQSLVDFGILLNRFPDSQYADEARARMIYLRNQL 177

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           A  E+ +G+YY+KR  ++AA  R + V+ NY       + +A +++ Y  L L D   + 
Sbjct: 178 AEHEIHVGQYYIKRKAWIAAANRGRYVVENYPTTPSVPDGLALMIQGYQQLGLTDLVNQT 237

Query: 250 VSLIQERYPQ 259
             ++ +  P 
Sbjct: 238 QKILSQNAPN 247


>gi|297538119|ref|YP_003673888.1| outer membrane assembly lipoprotein YfiO [Methylotenera sp. 301]
 gi|297257466|gb|ADI29311.1| outer membrane assembly lipoprotein YfiO [Methylotenera sp. 301]
          Length = 269

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 115/252 (45%), Gaps = 22/252 (8%)

Query: 21  KFALTIFFSIAV--CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           K+ L + F++ +  C + G   +      LD    +  +R +Y+     ++++++ KA  
Sbjct: 2   KYILILMFALLMNGCAIFGAPTE------LDDTKGLTAER-IYQMGSEKMRDKDYDKAIV 54

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
           YF +    +P    A ++ L +A+  +         +  + +I  +P   NVDY YYL G
Sbjct: 55  YFGKLESRYPNGRFAAQAQLETAYAHFKKQDPVLCVAAADRFIKLHPNHPNVDYAYYLKG 114

Query: 139 MS-----------YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           ++             Q I D   D R+ +        +V RY NS Y K A   +    N
Sbjct: 115 LAVFNERGVIEKLTKQQISD--RDPRSLRDSFVTFKDLVTRYPNSKYAKDATQRMVYLAN 172

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
            L+  E+++  YY+KR  Y+AAI R + VL  Y      E+A+  ++ AY  + L D  +
Sbjct: 173 SLSDHELDVANYYMKRQAYLAAINRCKYVLEYYPQTPGVEQALVTMISAYDLMGLDDLKK 232

Query: 248 EVVSLIQERYPQ 259
           + V +++  YP 
Sbjct: 233 DTVRILETNYPN 244


>gi|298485412|ref|ZP_07003501.1| Competence lipoprotein ComL [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298160062|gb|EFI01094.1| Competence lipoprotein ComL [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
          Length = 340

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 115/228 (50%), Gaps = 14/228 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           SS++V  +++++V    E+Y++A   L   +++ A E        +PF   A ++ L   
Sbjct: 19  SSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLELI 74

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR--- 153
           +  Y  G+ + A S  E +I  +P+  NVDY YY+ G+ S+ Q    + R +P DQ    
Sbjct: 75  YSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKRD 134

Query: 154 --ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
             A +      +++  R+ NS Y   A+  +   RN LA+ E+ +  YYL R  YVAA  
Sbjct: 135 PGAARDSFNEFAQLTSRFPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAAN 194

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           R + V+ N+ +     + +A +VE+Y  L L D A   + +++  YP 
Sbjct: 195 RGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242


>gi|119897308|ref|YP_932521.1| competence lipoprotein [Azoarcus sp. BH72]
 gi|119669721|emb|CAL93634.1| probable competence lipoprotein precursor [Azoarcus sp. BH72]
          Length = 269

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 118/249 (47%), Gaps = 19/249 (7%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           KFAL     +  C        SS    +D  +    Q+ +Y +A   + E  + +A + F
Sbjct: 12  KFALIGALLLGAC--------SSLPDEIDETSGWNAQK-LYAEAKASMTEGGYDRAIKLF 62

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM- 139
            +    +P+   A+++ +  A+  Y +G+   A +  + +I  +P   NVDYVYYL G+ 
Sbjct: 63  EKLEARYPYGRFAQQAQIEVAYAHYKSGEPGLALAAADRFIKLHPNHPNVDYVYYLKGLV 122

Query: 140 SYAQMI--------RDVP-YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
           ++ + +        +D+   D +  +        +V R+  S Y + +R  +    N LA
Sbjct: 123 NFNEDLGLLAGISNQDLSERDPKGAREAFDTFRELVTRFPESKYAEDSRQRMQYLVNSLA 182

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
           A +V + RYY +RG ++AA  R Q  +A Y      EEA+  +V++Y AL L D   +  
Sbjct: 183 AHDVHVARYYYRRGAFIAAANRAQTAVATYPGTPATEEALYLMVKSYEALGLKDLQGDAE 242

Query: 251 SLIQERYPQ 259
            ++Q+ +P 
Sbjct: 243 RVLQKNFPN 251


>gi|88707053|ref|ZP_01104749.1| competence lipoprotein ComL family protein [Congregibacter
           litoralis KT71]
 gi|88698703|gb|EAQ95826.1| competence lipoprotein ComL family protein [Congregibacter
           litoralis KT71]
          Length = 303

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 107/233 (45%), Gaps = 15/233 (6%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G       D+  DS      ++++Y++A  +L  +NF  +          +PF   A ++
Sbjct: 29  GCAGNDEEDISADSG-----EQQIYDEAQRYLNARNFDLSIRALQALESRYPFGKYAEQA 83

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD-----VPYD 151
            L   +  Y A   + A    + +I  +P+  NVDY YY+ G++ A   +D      P D
Sbjct: 84  QLELIYAHYGAFSPEAAIEAADRFIRLHPQHPNVDYAYYMKGLATATASQDFLSRFTPTD 143

Query: 152 Q--RAT---KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
           +  R T   K      S++V R+ +SPY   A+  +   RN LA  E+ +  YY +RG Y
Sbjct: 144 KTLRDTSFAKEAFAEFSQLVTRFPDSPYAADAKSRMVYLRNLLARNEIHVANYYFRRGAY 203

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           +AA  R + V+ N+       + +A + + Y+ L + D A+  +  +   +P 
Sbjct: 204 LAAANRGRYVVENFQRTPAVGDGLAVMAQGYLLLGMDDLAKNAIDTLALNFPD 256


>gi|327482284|gb|AEA85594.1| competence protein ComL [Pseudomonas stutzeri DSM 4166]
          Length = 329

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 113/245 (46%), Gaps = 22/245 (8%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           + IF   A C        SS +   +++ +V    E+Y++A   L  ++++ A       
Sbjct: 9   IAIFALTAAC--------SSNETVDENLGEV----ELYQQAQADLDNKSYTSAISKLKAL 56

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYA 142
              +PF   A ++ L   +  Y   + + A S  E +I  +P+  NVDY YYL G+ S+ 
Sbjct: 57  ESRYPFGRFAEQAQLELIYAYYRNAEPEAARSAAERFIRLHPQHPNVDYAYYLKGLASFD 116

Query: 143 Q----MIRDVPYDQR-----ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
           Q    + R +P D       A +      +++  RY NS Y   A+  +   RN LAA E
Sbjct: 117 QDRGLLARFLPLDMTKRDPGAARDSFNEFAQLTSRYPNSRYSPDAKARMIYLRNLLAANE 176

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           + +  YYLKR  YVAA  R + V+ N+       + +A + EAY  L L D A   +  +
Sbjct: 177 IHVAHYYLKRQAYVAAANRGRYVVENFQGTPAVADGLAVMTEAYQRLGLDDLADASLKTL 236

Query: 254 QERYP 258
           Q  YP
Sbjct: 237 QLNYP 241


>gi|331004933|ref|ZP_08328346.1| putative component of the lipoprotein assembly complex [gamma
           proteobacterium IMCC1989]
 gi|330421257|gb|EGG95510.1| putative component of the lipoprotein assembly complex [gamma
           proteobacterium IMCC1989]
          Length = 306

 Score = 90.1 bits (222), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 106/220 (48%), Gaps = 10/220 (4%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S+T+   + E+YE+    LK  NF  A +Y     + FPF   ++ + L   +  Y   +
Sbjct: 36  SLTNFGTEAELYEQVQKDLKRDNFLDAIKYLQLMEKKFPFGEYSKSAQLSLIYAHYGFDQ 95

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGM-------SYAQMIRDVPYDQR---ATKLML 159
            + A +    +I  +P+ +NVDY YY+ G+       ++ Q   +V   +R   A +   
Sbjct: 96  KESATASANRFIRLHPQHRNVDYAYYMKGLISFPDAKTFLQQFFNVDLSKRDISAARSSF 155

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
            + S +V+ +  S Y   A   +T   N LA  E+ +  YYL+R  ++AA  R + V+ N
Sbjct: 156 NHFSTLVKLFPESEYAPDALKRMTFLHNLLARHEIHVANYYLERKAFLAAANRGRYVVEN 215

Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           + +     +A+A +++ Y  + + D A   + +++  +P 
Sbjct: 216 FQETSAIPDALAVMIQGYHEMKMHDLAENSLEVLRTNFPN 255


>gi|289667067|ref|ZP_06488142.1| putative competence lipoprotein [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 293

 Score = 90.1 bits (222), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 122/266 (45%), Gaps = 22/266 (8%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           A  I   + + F+V    + ++D   D    V    ++Y K    +++ N++ A   + +
Sbjct: 11  ARLIALMLVMAFVVTGCHRGAKDKNPDEGMPVE---QLYGKGHDLMEKGNWAGAEASYKR 67

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
               +P+     ++++ SA+ QY AGK+    S  + +I  YP  +N+ Y+YYL G+  A
Sbjct: 68  LIAQYPYGPYTEQAMIESAYAQYKAGKHDDTVSSVDRFIRTYPTHRNISYLYYLRGL--A 125

Query: 143 QMIRDVPY------------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
              RD  +            D  + +      + + +RY NS Y   AR  +   R+  A
Sbjct: 126 NSNRDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAADARKRMIELRDVFA 185

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAR 247
             E++   YYL+R  +V+A  R   +L  Y  + +  +A+A L EAY  L    L  +AR
Sbjct: 186 QHELDNALYYLRRDAWVSAAGRANYLLETYPQSAYQYDAVAMLAEAYTHLGNKTLAADAR 245

Query: 248 EVVSLIQERYP--QGYWARYVETLVK 271
            V+ L   ++P   G W +Y   + K
Sbjct: 246 RVLELNDPQHPWLTGNWPKYPWAIRK 271


>gi|254785220|ref|YP_003072648.1| outer membrane assembly lipoprotein YfiO [Teredinibacter turnerae
           T7901]
 gi|237686542|gb|ACR13806.1| outer membrane assembly lipoprotein YfiO [Teredinibacter turnerae
           T7901]
          Length = 301

 Score = 89.7 bits (221), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 101/209 (48%), Gaps = 9/209 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            Y  A  +L+  N+S A E       +FPF   A ++ L   +  +   +Y  A +  + 
Sbjct: 35  TYNLAQKYLRSSNWSAAIEALEVMEENFPFGSYAEQAQLELIYAYFRGNEYDAAIASADR 94

Query: 120 YITQYPESKNVDYVYYLVGMS--------YAQMIRDVPY-DQRATKLMLQYMSRIVERYT 170
           ++  +P+ +NVDY +Y+ G++        Y+ +  D+   D    K    Y +++++RY 
Sbjct: 95  FVRLHPQHRNVDYAFYMRGIAAFHNDTAFYSMLPTDITQRDAGTAKDSFDYFAQLIDRYP 154

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
           +SPY   A+  +   RN LA  E+ +  YY KR  Y+AA  R + V+ N+       + +
Sbjct: 155 DSPYALDAQKRMIYLRNMLARYEIHVANYYFKRSAYLAAANRGRYVVENFEGTPAVPDGL 214

Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQ 259
           A + +AY  L + D ++    ++ + +P 
Sbjct: 215 AVMAQAYQMLGMDDYSKSAEKVLVKNFPN 243


>gi|146283957|ref|YP_001174110.1| competence protein ComL [Pseudomonas stutzeri A1501]
 gi|145572162|gb|ABP81268.1| competence protein ComL [Pseudomonas stutzeri A1501]
          Length = 374

 Score = 89.7 bits (221), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 113/245 (46%), Gaps = 22/245 (8%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           + IF   A C        SS +   +++ +V    E+Y++A   L  ++++ A       
Sbjct: 54  IAIFALTAAC--------SSNETVDENLGEV----ELYQQAQADLDNKSYTSAISKLKAL 101

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYA 142
              +PF   A ++ L   +  Y   + + A S  E +I  +P+  NVDY YYL G+ S+ 
Sbjct: 102 ESRYPFGRFAEQAQLELIYAYYRNAEPEAARSAAERFIRLHPQHPNVDYAYYLKGLASFD 161

Query: 143 Q----MIRDVPYDQR-----ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
           Q    + R +P D       A +      +++  RY NS Y   A+  +   RN LAA E
Sbjct: 162 QDRGLLARFLPLDMTKRDPGAARDSFNEFAQLTSRYPNSRYSPDAKARMIYLRNLLAANE 221

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           + +  YYLKR  YVAA  R + V+ N+       + +A + EAY  L L D A   +  +
Sbjct: 222 IHVAHYYLKRQAYVAAANRGRYVVENFQGTPAVADGLAVMTEAYQRLGLDDLADASLKTL 281

Query: 254 QERYP 258
           Q  YP
Sbjct: 282 QLNYP 286


>gi|257095461|ref|YP_003169102.1| outer membrane assembly lipoprotein YfiO [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257047985|gb|ACV37173.1| outer membrane assembly lipoprotein YfiO [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 264

 Score = 89.7 bits (221), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 16/214 (7%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L + +++KA +YF +    +P+   A+++ +  A+  +   +   A +  +
Sbjct: 36  KLYAEAKDALNDGSYAKAIKYFEKLESRYPYGRYAQQAQIEIAYAYWKDQEPASAVAACD 95

Query: 119 EYITQYPESKNVDYVYYLVGM-------------SYAQMIRDVPYDQRATKLMLQYMSRI 165
            +I  +P   NVDYVYYL G+             S   M    P   R +         +
Sbjct: 96  RFIKLHPNHPNVDYVYYLRGLINFNEDLGIMGTISNQDMTERDPKGARES---FDAFREL 152

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           V R+ +S Y   A   +    N LA+ E+ + RYY+KRG Y+AA  R Q  + NY DA  
Sbjct: 153 VTRFPDSKYTPDALLRMKYLVNALASLELHVARYYMKRGAYLAAANRAQYAVKNYPDAPA 212

Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            EEA+  +V+AY +L L D   +   +++  YP 
Sbjct: 213 TEEALFIMVKAYDSLGLNDLRDDAERVMRTNYPN 246


>gi|307543918|ref|YP_003896397.1| lipoprotein [Halomonas elongata DSM 2581]
 gi|307215942|emb|CBV41212.1| K05807 putative lipoprotein [Halomonas elongata DSM 2581]
          Length = 269

 Score = 89.4 bits (220), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 103/211 (48%), Gaps = 10/211 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y++    L++  ++ A          +PF   A ++ L   +  Y    ++ A +   
Sbjct: 38  QLYQEGRAALEDGRYTTAVNRLEAIDTRYPFGEHAEQAQLELIYAYYETSDWEAARAAAS 97

Query: 119 EYITQYPESKNVDYVYYLVGMS----------YAQMIRDVPYDQRATKLMLQYMSRIVER 168
            +I  +P+   VDY YY+ G++            ++I     D  AT+        +V R
Sbjct: 98  RFIRLHPDHPQVDYAYYMRGLAAWEAGRFSLESLRLIDISKRDLGATRDAYSDFRDLVRR 157

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS Y   AR  +   RN LA  E+E+  +YL++G Y+AA+ R + V+ +Y +AE   +
Sbjct: 158 YPNSQYAPDARQRIVYLRNLLAQHELEVADFYLRKGAYLAAVKRGRWVIEHYPEAESTRD 217

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           A+A +VE Y+ L + + A+E + ++ E  P 
Sbjct: 218 ALAVMVEGYLGLDMPERAKESLRVLIENAPN 248


>gi|256257866|ref|ZP_05463402.1| COML, competence lipoprotein [Brucella abortus bv. 9 str. C68]
 gi|260884156|ref|ZP_05895770.1| competence protein ComL [Brucella abortus bv. 9 str. C68]
 gi|260873684|gb|EEX80753.1| competence protein ComL [Brucella abortus bv. 9 str. C68]
          Length = 125

 Score = 89.4 bits (220), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 44/89 (49%), Positives = 60/89 (67%)

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
           Y   A+  + V R+QLA KE++IGRYYL+R EY+AAI RF+ V+  YS+    EEA+ARL
Sbjct: 2   YTDDAKTKIRVARDQLAGKEMQIGRYYLERKEYLAAIKRFRGVVEEYSNTRQVEEALARL 61

Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYW 262
           VEAY AL L  EA+   S++ + +P   W
Sbjct: 62  VEAYYALGLTSEAQMAASVLGKNFPDSQW 90


>gi|289662939|ref|ZP_06484520.1| putative competence lipoprotein [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 293

 Score = 89.4 bits (220), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 122/266 (45%), Gaps = 22/266 (8%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           A  I   + + F+V    + ++D   D    V    ++Y K    +++ N++ A   + +
Sbjct: 11  ARLIALMLVMAFVVTGCHRGAKDKNPDEGMPVE---QLYGKGHDLMEKGNWAGAEASYKR 67

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
               +P+     ++++ SA+ QY AGK+    S  + +I  YP  +N+ Y+YYL G+  A
Sbjct: 68  LIAQYPYGPYTEQAMIESAYAQYKAGKHDDTVSSVDRFIRTYPTHRNISYLYYLRGL--A 125

Query: 143 QMIRDVPYDQRATKL------------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
              RD  + +R   L                 + + +RY NS Y   AR  +   R+  A
Sbjct: 126 NSNRDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAADARKRMIELRDVFA 185

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAR 247
             E++   YYL+R  +V+A  R   +L  Y  + +  +A+A L EAY  L    L  +AR
Sbjct: 186 QHELDNALYYLRRDAWVSAAGRANYLLETYPQSAYQYDAVAVLAEAYTHLGNKTLAADAR 245

Query: 248 EVVSLIQERYP--QGYWARYVETLVK 271
            V+ L   ++P   G W +Y   + K
Sbjct: 246 RVLELNDPQHPWLTGNWPKYPWAIRK 271


>gi|56478104|ref|YP_159693.1| putative competence lipoprotein precursor [Aromatoleum aromaticum
           EbN1]
 gi|56314147|emb|CAI08792.1| putative competence lipoprotein precursor [Aromatoleum aromaticum
           EbN1]
          Length = 265

 Score = 89.4 bits (220), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 115/250 (46%), Gaps = 15/250 (6%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
            A   F S+AV   +      S    +D       QR +Y +A  F+ E  + +A + F 
Sbjct: 1   MARVTFRSLAVIAALLLGGCGSMPEQIDETAGWNAQR-LYSEAKTFMNEGAYEQAIKLFE 59

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
           +    +P+   A+++ +  A+ QY +G+   A +  + +I  +P   N DY YYL G+  
Sbjct: 60  KLEARYPYGRYAQQAQIEVAYAQYKSGEPALAIAAADRFIKLHPNHPNADYAYYLKGL-- 117

Query: 142 AQMIRDVPY------------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
           A    D+              D +  +       ++V+R+  S Y + A   +    N L
Sbjct: 118 ATFNEDLGLLAGLSNQDLSERDPKGAQESFDTFGQLVKRFPESRYAEDAGQRMQYLVNSL 177

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           AA EV + RYY +RG YVAA+ R +  L  Y  A  AEEA+  LV++Y  L + +   + 
Sbjct: 178 AAHEVHVARYYYRRGAYVAAVNRARTALETYPQAPAAEEALFVLVKSYDTLGMTELRDDA 237

Query: 250 VSLIQERYPQ 259
             ++++ +P 
Sbjct: 238 DRVMRKNFPN 247


>gi|325916248|ref|ZP_08178529.1| outer membrane assembly lipoprotein YfiO [Xanthomonas vesicatoria
           ATCC 35937]
 gi|325537542|gb|EGD09257.1| outer membrane assembly lipoprotein YfiO [Xanthomonas vesicatoria
           ATCC 35937]
          Length = 293

 Score = 89.4 bits (220), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 122/266 (45%), Gaps = 22/266 (8%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           A  I   + + F+V    + ++D   D    V    ++Y K    +++ N++ A   + +
Sbjct: 11  ARLIALMLVMAFVVTGCHRGAKDKNPDEGMPVE---QLYGKGHGLMEKGNWAGAEASYKR 67

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
               +P+     ++++ +A+ QY AGK+    S  + +I  YP  +N+ Y+YYL G+  A
Sbjct: 68  LIAQYPYGPYTEQAMIETAYAQYKAGKHDDTVSSVDRFIRTYPTHRNISYLYYLRGL--A 125

Query: 143 QMIRDVPYDQRATKL------------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
              RD  + +R   L                 + + +RY NS Y   AR  +   R+  A
Sbjct: 126 NSNRDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAPDARKRMIELRDVFA 185

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAR 247
             E++   YYL+R  +V+A  R   +L  Y  + +  +A+A L EAY  L    L  +AR
Sbjct: 186 QHELDNALYYLRRNAWVSAAGRANYLLETYPQSAYQYDAVAVLAEAYTHLGNKTLAADAR 245

Query: 248 EVVSLIQERYP--QGYWARYVETLVK 271
            V+ L   ++P   G W +Y   + K
Sbjct: 246 RVLELNSPQHPWLTGNWPKYPWAIRK 271


>gi|288940533|ref|YP_003442773.1| outer membrane assembly lipoprotein YfiO [Allochromatium vinosum
           DSM 180]
 gi|288895905|gb|ADC61741.1| outer membrane assembly lipoprotein YfiO [Allochromatium vinosum
           DSM 180]
          Length = 275

 Score = 89.0 bits (219), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 13/207 (6%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L   ++  A E + +    +PF   A ++ L  A+  Y A + + A +  +
Sbjct: 37  KLYSEAATELDAGSYEHAIELYQKLEARYPFGRYAMQAQLDVAYAHYRAEEPEDALAAAD 96

Query: 119 EYITQYPESKNVDYVYYLVGM-----SYAQMIRDVPYD--QRATKLMLQYMSR---IVER 168
            +I  YP++  VDY YYL G+     S   + R +P D  QR     L        +VER
Sbjct: 97  RFIKLYPQNPYVDYAYYLKGIVNYNRSIGFLDRFIPTDASQRDPGSALDAFKDFAILVER 156

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           + NS Y + AR  +   R+ LA  EV + RYY+KRG Y+AA  R   V+ +Y      ++
Sbjct: 157 FPNSKYAEDARQRMVYLRSNLAMNEVHVARYYMKRGAYLAAANRANHVIQHYQRTSAVDD 216

Query: 229 AMARLVEAYVALALMD---EAREVVSL 252
           A+  L++AY AL   D   +A+ V+ L
Sbjct: 217 ALEVLIDAYRALGKDDLAADAKRVLDL 243


>gi|92112629|ref|YP_572557.1| competence lipoprotein ComL, putative [Chromohalobacter salexigens
           DSM 3043]
 gi|91795719|gb|ABE57858.1| competence lipoprotein ComL, putative [Chromohalobacter salexigens
           DSM 3043]
          Length = 268

 Score = 89.0 bits (219), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 10/214 (4%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           ++E+Y++A   L    +S A          +PF   A ++ L   +  Y    ++QA + 
Sbjct: 33  EQELYQQAQSALDAGRYSTAVTRLEALDTRYPFGRYAEQAQLELIYAYYQTEDWEQARAA 92

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIR---------DVPY-DQRATKLMLQYMSRIV 166
              +I  +P+   VDY YY+ G++  Q  R         D+   D  AT+        +V
Sbjct: 93  ASRFIRLHPDHAQVDYAYYMRGLAAYQAGRFSLEGLELIDISKRDLGATRDANVDFGELV 152

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
            R+ +SPY   AR  +   RN L+  E+++  +YL++G Y+AAI R + VL +Y      
Sbjct: 153 RRFPDSPYAADARQRIVYLRNVLSRHELQVADFYLRKGAYLAAINRGEWVLQHYPQTPAT 212

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            +A+A +VE Y+ L + D AR V+  + +  P  
Sbjct: 213 RDALAVMVEGYLGLDMRDRARTVLQTLIKNDPDN 246


>gi|21243944|ref|NP_643526.1| competence lipoprotein [Xanthomonas axonopodis pv. citri str. 306]
 gi|78048899|ref|YP_365074.1| putative competence lipoprotein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|294625814|ref|ZP_06704431.1| competence lipoprotein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|294666974|ref|ZP_06732203.1| competence lipoprotein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|325929043|ref|ZP_08190198.1| outer membrane assembly lipoprotein YfiO [Xanthomonas perforans
           91-118]
 gi|21109554|gb|AAM38062.1| competence lipoprotein [Xanthomonas axonopodis pv. citri str. 306]
 gi|78037329|emb|CAJ25074.1| putative competence lipoprotein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|292599889|gb|EFF44009.1| competence lipoprotein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292603263|gb|EFF46685.1| competence lipoprotein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|325540576|gb|EGD12163.1| outer membrane assembly lipoprotein YfiO [Xanthomonas perforans
           91-118]
          Length = 293

 Score = 89.0 bits (219), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 122/266 (45%), Gaps = 22/266 (8%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           A  I   + + F+V    + ++D   D    V    ++Y K    +++ N++ A   + +
Sbjct: 11  ARLIALMLVMAFVVTGCHRGAKDKNPDEGMPVE---QLYGKGHNLMEKGNWAGAEASYKR 67

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
               +P+     ++++ +A+ QY AGK+  A S  + +I  YP  +N+ Y+YYL G+  A
Sbjct: 68  LIAQYPYGPYTEQAMIETAYAQYKAGKHDDAVSSVDRFIRTYPTHRNISYLYYLRGL--A 125

Query: 143 QMIRDVPY------------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
              RD  +            D  + +      + + +RY NS Y   AR  +   R+  A
Sbjct: 126 NSNRDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAADARKRMIELRDIFA 185

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAR 247
             E++   YYL+R  +V+A  R   +L  Y  +    +A+A L EAY  L    L  +AR
Sbjct: 186 QHELDNALYYLRRDAWVSAAGRANYLLETYPQSAFQYDAVAVLAEAYTHLGNKTLAADAR 245

Query: 248 EVVSLIQERYP--QGYWARYVETLVK 271
            V+ L   ++P   G W +Y   + K
Sbjct: 246 RVLELNDPQHPWLTGNWPKYPWAIRK 271


>gi|291614497|ref|YP_003524654.1| outer membrane assembly lipoprotein YfiO [Sideroxydans
           lithotrophicus ES-1]
 gi|291584609|gb|ADE12267.1| outer membrane assembly lipoprotein YfiO [Sideroxydans
           lithotrophicus ES-1]
          Length = 264

 Score = 88.6 bits (218), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 105/208 (50%), Gaps = 14/208 (6%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y KA   ++++N+ KA + F      +P+   A+++ +  A+  Y   +   A +  +
Sbjct: 31  ELYAKAQASMQDENYEKAVKQFETLQSRYPYGRYAQQAQMEIAYAYYKHSEPAPAIAALD 90

Query: 119 EYITQYPESKNVDYVYYLVGMS---------YAQMIRDVPYDQRATKLMLQYMS--RIVE 167
            +   YP S ++DYV YL G+          +  M +  P ++  + L   + S   +V 
Sbjct: 91  HFAKMYPMSTHLDYVLYLKGLINFNENINSLFGTMFKQDPSERDPSALRESFNSFKELVT 150

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
           R+ +S Y   A+  +    N LA+ E+ I  YYL+RG YVAA  R + VL ++ +     
Sbjct: 151 RFPDSKYAPDAKLRMQYLLNSLASSEIHIASYYLRRGAYVAAANRAKSVLIDFPNTPQTR 210

Query: 228 EAMARLVEAYVALA---LMDEAREVVSL 252
           EA+  LV+AY A+    L D+ + V+SL
Sbjct: 211 EALQILVQAYDAMGMEVLRDDTQRVLSL 238


>gi|257453789|ref|ZP_05619067.1| DNA uptake lipoprotein [Enhydrobacter aerosaccus SK60]
 gi|257448716|gb|EEV23681.1| DNA uptake lipoprotein [Enhydrobacter aerosaccus SK60]
          Length = 360

 Score = 88.6 bits (218), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 117/261 (44%), Gaps = 23/261 (8%)

Query: 17  YQLYKFALTIFFSIAVCFLVGWERQSSRDVY--LDSVTDVRYQREV---YEKAVLFLKEQ 71
           + L K       ++A+  L G +   +  ++   D V   + ++     Y+ A   +K+ 
Sbjct: 2   HHLSKVVGVTAITVALTTLSGCQTLKNSKLFGGKDEVVATKAEKSEQGYYQAASDNIKKG 61

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           N +KA    N     +P    + ++LL   + QY  G Y  A +  + +I  YP +  VD
Sbjct: 62  NLAKAISQLNDLRTFYPVGDYSEQALLDLMYAQYQHGDYLDAIASADRFIQSYPSNPQVD 121

Query: 132 YVYYLVGMSYAQMI--------------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           Y YY+ G+S  Q                RD+ Y    +++      +++ R+ NS Y   
Sbjct: 122 YAYYVRGISNMQAASGGVMKYTKLNPAHRDMGY----SRIAFNNFQQLINRFPNSAYAPD 177

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           A   +    NQL+  E+++ R+Y+KR  YVAA  R + V   Y  +E   E++A +  +Y
Sbjct: 178 AALRMRYIYNQLSESEMDVARWYIKRKAYVAAANRAKWVFQYYPQSEAIPESIATIAYSY 237

Query: 238 VALALMDEAREVVSLIQERYP 258
             L + D A +   L++  YP
Sbjct: 238 DKLGMTDTANQYKQLLRINYP 258


>gi|326316816|ref|YP_004234488.1| outer membrane assembly lipoprotein YfiO [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323373652|gb|ADX45921.1| outer membrane assembly lipoprotein YfiO [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 265

 Score = 88.6 bits (218), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 10/215 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y +A   L   ++ KA   F +         +A+++ L  A+ QY  G+  QA +  + 
Sbjct: 37  IYSEARDELNSNSYDKAVPLFEKLEGRAAGTPLAQQAQLEKAYAQYKGGEKAQAIATLDR 96

Query: 120 YITQYPESKNVDYVYYLVGM----------SYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           ++  +P S   DY  YL G+          S+         DQ+A K   +    +V R+
Sbjct: 97  FMKLHPASPAYDYALYLKGLVNFNDNLGLFSWLSRQDLSERDQKAAKDSFESFRELVTRF 156

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
            +S Y + A+  +T   N LA  EV + RYY +RG YVAAI R Q+ LA+Y D    EEA
Sbjct: 157 PDSRYARDAQQRMTYIVNSLAQYEVHVARYYYQRGAYVAAINRAQIALADYKDVPALEEA 216

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
           +  L+++Y AL +     +   ++   YPQ  + R
Sbjct: 217 LYILIKSYDALGMTQLRDDAQRVMAASYPQSEYMR 251


>gi|93005954|ref|YP_580391.1| putative lipoprotein (DUF0169) [Psychrobacter cryohalolentis K5]
 gi|92393632|gb|ABE74907.1| putative lipoprotein (DUF0169) [Psychrobacter cryohalolentis K5]
          Length = 359

 Score = 88.6 bits (218), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 9/218 (4%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
           VT  + ++  Y  A+  + +  +++A E        +P    A +SLL   + QY++GKY
Sbjct: 42  VTAEKSEQAYYNDAIAQIDKGRYTQAIEDLTNLRTFYPTGQYAEQSLLDMMYAQYASGKY 101

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ---------MIRDVPYDQRATKLMLQY 161
           + AA+  E++I  YP +  V Y YY+ G++  Q          +     D    ++    
Sbjct: 102 ETAAASAEQFIRLYPSNPQVSYAYYVRGVANMQGSSEGLKLFKLNQAERDTAYYRIAFAN 161

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
              ++ +Y NSPY   A   +T   NQ A  E+    +Y++R  YVAA+ R + V   Y 
Sbjct: 162 FQELLNKYPNSPYAPDAAQRMTFIYNQFAESEMSAANWYIEREAYVAAVNRAKWVFQYYP 221

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            +E   +A+A L  ++  L L D A E  +L+Q  YP 
Sbjct: 222 LSESVPDAIAVLAYSHEKLGLTDLANEYKTLLQINYPN 259


>gi|153006273|ref|YP_001380598.1| tetratricopeptide domain-containing protein [Anaeromyxobacter sp.
           Fw109-5]
 gi|152029846|gb|ABS27614.1| Tetratricopeptide domain protein [Anaeromyxobacter sp. Fw109-5]
          Length = 258

 Score = 88.6 bits (218), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 14/210 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YE  V  LK  NFS+A ++F      FPF+  A  S L  A +++   +Y +AA   +++
Sbjct: 37  YEAGVDELKHDNFSEAVKFFEYVRTKFPFSKYAPLSELRLADLKFDQERYVEAAEAYQQF 96

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVP-----------YDQRATKLMLQYMSRIVERY 169
           +T +P  + V+Y    VG+SY   +RD P            DQR  +   + +   V+  
Sbjct: 97  VTMHPTHEEVEYAELRVGLSY---LRDAPGDFVLFPPAHEKDQRQVEKAARALRDFVQAK 153

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
            +S +   AR  +     +LA+ E  +G YY KR  +  A  R++ ++A Y  + H  EA
Sbjct: 154 PDSKHAPQARKLLAEAEGRLASHEWYVGEYYFKRKRWAGAAGRYEALVAKYPGSRHEAEA 213

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQ 259
           + +L  +Y+ +     AR  +  +  ++PQ
Sbjct: 214 LMKLARSYLEIDEKHRARTALQKLIVKHPQ 243


>gi|33592278|ref|NP_879922.1| competence lipoprotein precursor [Bordetella pertussis Tohama I]
 gi|33597726|ref|NP_885369.1| competence lipoprotein precursor [Bordetella parapertussis 12822]
 gi|33602574|ref|NP_890134.1| competence lipoprotein precursor [Bordetella bronchiseptica RB50]
 gi|33571923|emb|CAE41443.1| competence lipoprotein precursor [Bordetella pertussis Tohama I]
 gi|33574154|emb|CAE38484.1| competence lipoprotein precursor [Bordetella parapertussis]
 gi|33577013|emb|CAE34093.1| competence lipoprotein precursor [Bordetella bronchiseptica RB50]
 gi|332381695|gb|AEE66542.1| competence lipoprotein precursor [Bordetella pertussis CS]
          Length = 266

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 102/211 (48%), Gaps = 10/211 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y  A   +   N++ A E        +PF   A+++L+  A+V +  G+ +QA +  +
Sbjct: 35  QLYADAKQEVAAGNWTDARERLTAIESRYPFGTYAQQALIELAYVNWKDGENEQALAAID 94

Query: 119 EYITQYPESKNVDYVYYLVGMS--------YAQMIRDVPYDQRATKLMLQY--MSRIVER 168
            +   YP     DYV YL G+          + +    P ++    L   Y   + +V+R
Sbjct: 95  RFQQLYPNHPGTDYVLYLKGLVNFTPASAFMSNLTGQDPAERDPKGLRASYDAFNELVQR 154

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           + NS Y   A+  +T   N +A  EV + RYY +RG YVAA  R Q V+ ++  A  +EE
Sbjct: 155 FPNSKYTPDAQKRMTWLVNAIAMNEVHVARYYYERGAYVAAANRAQTVITDFEGAPASEE 214

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           A+  +VE+Y  L + +   +   ++ + YP 
Sbjct: 215 ALYIMVESYDKLGMTELKGDAERVLDQNYPN 245


>gi|304309990|ref|YP_003809588.1| competence lipoprotein ComL [gamma proteobacterium HdN1]
 gi|301795723|emb|CBL43922.1| competence lipoprotein ComL [gamma proteobacterium HdN1]
          Length = 272

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 10/213 (4%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           +R+ YE A   LK++ FS+A E     +  +PF   A ++ L   +  Y +  Y  +   
Sbjct: 28  ERQYYEDAQKALKDEQFSRAVERLEALNARYPFGRYAEQAQLDLVYAYYRSMDYASSGVT 87

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDV-------PYDQR---ATKLMLQYMSRIV 166
            E +I  +P+   +DY YY+ G+S   + R +        Y +R     K      SR++
Sbjct: 88  AERFIRMHPDHTELDYAYYMKGLSTYSVDRGIFERFIPSDYSERDLEPAKESFNDFSRLL 147

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
            R+ NS Y   AR  +   RN  A  E++   + ++RG YVA+  R + V+ N+      
Sbjct: 148 NRFPNSIYAPDARKRMVYLRNLFAEHELKAAHWNMRRGAYVASANRARYVVENFDRTPAM 207

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            E +A L ++Y  L L D A + + ++   YP 
Sbjct: 208 AEGLAILYKSYRELGLNDLANDTLKVLVSNYPH 240


>gi|320326248|gb|EFW82302.1| competence lipoprotein ComL [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320330672|gb|EFW86649.1| competence lipoprotein ComL [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330881341|gb|EGH15490.1| competence lipoprotein ComL [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 340

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 115/228 (50%), Gaps = 14/228 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           SS++V  +++++V    E+Y++A   L   +++ A E        +PF   A ++ L   
Sbjct: 19  SSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLELI 74

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR--- 153
           +  Y  G+ + A S  E +I  +P+  NVDY YY+ G+ S+ Q    + R +P DQ    
Sbjct: 75  YSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKRD 134

Query: 154 --ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
             A +      +++  R+ NS Y   A+  +   R+ LA+ E+ +  YYL R  YVAA  
Sbjct: 135 PGAARDSFNEFAQLTSRFPNSRYSPDAKQRMIYLRSLLASYEIHVADYYLTRQAYVAAAN 194

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           R + V+ N+ +     + +A +VE+Y  L L D A   + +++  YP 
Sbjct: 195 RGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242


>gi|254468028|ref|ZP_05081434.1| competence lipoprotein ComL [beta proteobacterium KB13]
 gi|207086838|gb|EDZ64121.1| competence lipoprotein ComL [beta proteobacterium KB13]
          Length = 268

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 116/249 (46%), Gaps = 19/249 (7%)

Query: 24  LTIFFS---IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           LT+F S   +A CF+ G   +       D  T  +    +Y KA  F  +++F K  +Y 
Sbjct: 5   LTLFISSIFLAGCFIFGEPTE------FDETTG-QSPEWIYGKAEAFTDQRDFRKTIDYL 57

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
            +  + +P   +   + L  A+  Y  G+ + + S   ++IT YP   ++DY YYL G++
Sbjct: 58  EKLVKRYPDNKLIPSARLNLAYAYYKFGQKELSTSTVNQFITLYPSHPSMDYAYYLKGLN 117

Query: 141 YAQ--------MIRDVP-YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
             Q         ++D+   D    K      S +V++Y NS Y + +   +    N++A 
Sbjct: 118 LYQERGIINKLTMQDISDRDVNNLKQAFDAFSELVKKYPNSKYSQDSTDRMIYLMNKIAE 177

Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
            ++ + RYY+KR  YVAA+ R + V   Y ++ H EE++     AY  L L D       
Sbjct: 178 YDLHVARYYMKRRAYVAALNRAKNVYTTYPESIHVEESLVIQYIAYKELKLKDLEIATKK 237

Query: 252 LIQERYPQG 260
           +I   YP+ 
Sbjct: 238 VIDLNYPEN 246


>gi|270156941|ref|ZP_06185598.1| putative competence lipoprotein ComL [Legionella longbeachae
           D-4968]
 gi|289164633|ref|YP_003454771.1| competence lipoprotein comL precursor [Legionella longbeachae
           NSW150]
 gi|269988966|gb|EEZ95220.1| putative competence lipoprotein ComL [Legionella longbeachae
           D-4968]
 gi|288857806|emb|CBJ11652.1| putative competence lipoprotein comL precursor [Legionella
           longbeachae NSW150]
          Length = 257

 Score = 87.8 bits (216), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 115/258 (44%), Gaps = 17/258 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           L+ FAL +  S+A C    W  +   D   +S        ++Y  +   L ++ ++ A +
Sbjct: 7   LFLFALIV--SLAAC--KSWWHKDEED---NSPYKGMTAEQLYTASQKDLHKKEYATAIK 59

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
           +       +PF+    KS L   +  Y    Y  AA+  E +I  YP ++NVDY YY+ G
Sbjct: 60  HLEAIETMYPFSDYTEKSQLDLIYAYYKNEDYPAAAATAERFIHLYPRARNVDYAYYMKG 119

Query: 139 MSYAQMIRDV-----PYDQ--RATKLMLQYMSR---IVERYTNSPYVKGARFYVTVGRNQ 188
           M+  Q  R V     P D+  R     +Q  S    +V+++ +S Y   A   +T  RN 
Sbjct: 120 MANFQQTRGVFAKFLPLDESWRDPGTQIQAYSDFGILVQKFPDSKYKANALQRMTYLRNM 179

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
            A  E+    +Y KR  YVAAI R   V+ NY  A   ++A+  + E+  AL     A E
Sbjct: 180 FAQHELNASTFYFKRKMYVAAIERANYVVKNYPQAPSVKQALVVMYESNKALGFNKAAEE 239

Query: 249 VVSLIQERYPQGYWARYV 266
            +S+    Y      R V
Sbjct: 240 ALSIYNATYHTNKMERIV 257


>gi|189183077|ref|YP_001936862.1| ComL-like lipoprotein [Orientia tsutsugamushi str. Ikeda]
 gi|189179848|dbj|BAG39628.1| ComL-like lipoprotein [Orientia tsutsugamushi str. Ikeda]
          Length = 264

 Score = 87.8 bits (216), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/258 (20%), Positives = 128/258 (49%), Gaps = 16/258 (6%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
            +++F  T+F  +     + + ++ +    L        + + Y +A L  +++ ++ A 
Sbjct: 13  NMFRFICTLFVLLCFTNCIVFAKEKTTITCLS-------EDDAYSRAELLFQKKKYNAAA 65

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           + F         +  A K+ LM  +  Y AG+Y +A+ + + +I  +P  + +  VYYL 
Sbjct: 66  KQFFDIFVQHLGSNTATKAELMRGYSLYLAGQYSEASEVLDNFIRLHPVHQKIADVYYLK 125

Query: 138 GMS-YAQMIRDVPYDQRATKLMLQY---MSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
            ++ Y Q      ++Q+  + +L     + ++++++  S +   A+  + V    LA  +
Sbjct: 126 ALAEYKQ-----AHNQQDLEQLLHARLELQQVIDKFPKSDFAIKAKEKINVISKNLAGSQ 180

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           ++IG++YL +   +AA+ RF  V+  YS   +  EA+ R+ ++Y  L    E +E ++++
Sbjct: 181 IDIGKFYLNKKNPIAALNRFNTVVDKYSHTSYYPEAIYRIAQSYALLGRKQEMKEQLAIL 240

Query: 254 QERYPQGYWARYVETLVK 271
             ++P   W++   +L++
Sbjct: 241 NSKFPNSTWSKRASSLLQ 258


>gi|331008768|gb|EGH88824.1| competence lipoprotein ComL [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 340

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 114/228 (50%), Gaps = 14/228 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           SS++V  +++++V    E+Y++A   L   +++ A E        +PF   A ++ L   
Sbjct: 19  SSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLELI 74

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR--- 153
           +  Y  G+ + A S  E +I  +P+  NVDY YY+ G+ S+ Q    + R +P DQ    
Sbjct: 75  YSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKRD 134

Query: 154 --ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
             A +      +++  R+ NS Y   A+  +   RN LA+ E+ +  Y L R  YVAA  
Sbjct: 135 PGAARDSFNEFAQLTSRFPNSRYSPDAKQRMIYLRNLLASYEIHVADYSLTRQAYVAAAN 194

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           R + V+ N+ +     + +A +VE+Y  L L D A   + +++  YP 
Sbjct: 195 RGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242


>gi|120611899|ref|YP_971577.1| hypothetical protein Aave_3241 [Acidovorax citrulli AAC00-1]
 gi|120590363|gb|ABM33803.1| putative transmembrane protein [Acidovorax citrulli AAC00-1]
          Length = 265

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 10/215 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y +A   L   ++ KA   F +         +A+++ L  A+ QY  G+  QA +  + 
Sbjct: 37  IYSEARDELNSNSYDKAVPLFEKLEGRAAGTPLAQQAQLEKAYAQYKGGEKAQAIATLDR 96

Query: 120 YITQYPESKNVDYVYYLVGM----------SYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           ++  +P S   DY  YL G+          S+         DQ+A K   +    +  R+
Sbjct: 97  FMKLHPASPAYDYALYLKGLVNFNDNLGLFSWLSRQDLSERDQKAAKDSFESFRELTTRF 156

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
            +S Y + A+  +T   N LA  EV + RYY +RG YVAAI R Q+ LA+Y D    EEA
Sbjct: 157 PDSRYARDAQQRMTYIVNSLAQYEVHVARYYYQRGAYVAAINRAQIALADYKDVPALEEA 216

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
           +  L+++Y AL +     +   ++   YPQ  + R
Sbjct: 217 LYILIKSYDALGMTQLRDDAQRVMAASYPQSEYMR 251


>gi|325921579|ref|ZP_08183424.1| outer membrane assembly lipoprotein YfiO [Xanthomonas gardneri ATCC
           19865]
 gi|325547933|gb|EGD18942.1| outer membrane assembly lipoprotein YfiO [Xanthomonas gardneri ATCC
           19865]
          Length = 293

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 110/230 (47%), Gaps = 19/230 (8%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y K+   +++ N++ A   + +    +P+     ++++ +A+ QY AGK+    S  +
Sbjct: 44  QLYGKSHGLMEKGNWAGAEASYKRLIAQYPYGPYTEQAMIETAYAQYKAGKHDDTVSSVD 103

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL------------MLQYMSRIV 166
            +I  YP  +N+ Y+YYL G+  A   RD  + +R   L                 + + 
Sbjct: 104 RFIRTYPTHRNISYLYYLRGL--ANSNRDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTVT 161

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
           +RY NS Y   AR  +   R+  A  E++   YYL+R  +V+A  R   +L  Y  + + 
Sbjct: 162 DRYPNSRYAPDARKRMIELRDVFAQHELDNALYYLRRNAWVSAAGRANYLLETYPQSAYQ 221

Query: 227 EEAMARLVEAYVALA---LMDEAREVVSLIQERYP--QGYWARYVETLVK 271
            +A+A L EAY  L    L  +AR V+ L   ++P   G W +Y   + K
Sbjct: 222 YDAVAVLAEAYTHLGNKTLAADARRVLELNSPQHPWLTGNWPKYPWAIRK 271


>gi|52425875|ref|YP_089012.1| NrfG protein [Mannheimia succiniciproducens MBEL55E]
 gi|52307927|gb|AAU38427.1| NrfG protein [Mannheimia succiniciproducens MBEL55E]
          Length = 297

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 104/208 (50%), Gaps = 10/208 (4%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           ++E++     +L+E N+++A  Y       FP +  + ++ L   F  Y +  Y +  + 
Sbjct: 32  EQELFSTGANYLQEGNYTQATRYLEAVDSRFPGSSYSEQAELNLIFSTYKSQDYTKTLTT 91

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----QRAT------KLMLQYMSRIV 166
            + ++ Q+P+S+++DYV Y+  ++ + +  ++  D     R+T      K        +V
Sbjct: 92  ADRFLQQFPQSQHLDYVLYMAALTNSALGDNLFQDFFGVDRSTRETTSMKTAFNNFQTLV 151

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
           + + NSPY   A   +   +++LA  E+EI ++Y KR  +VA   R   +L +Y D +  
Sbjct: 152 QNFPNSPYTPDALARMAYIKDRLARHELEIAKFYAKRSAWVATSNRITGMLRSYPDTQAT 211

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQ 254
            EA+  L E+Y  + L   A +  +L++
Sbjct: 212 LEALPLLQESYEKMGLTQLASQAATLVK 239


>gi|171463621|ref|YP_001797734.1| putative transmembrane protein [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171193159|gb|ACB44120.1| putative transmembrane protein [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 295

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 14/220 (6%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           TD+  + ++Y +A   L + +F+K  +YF +    FPF   ++++ + +A+  + A +  
Sbjct: 56  TDIWSEAKLYSEATDKLNDADFAKCGKYFEKLEARFPFGPYSQQAQINAAYCYWKAQEQT 115

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY------------DQRATKLML 159
           QA    + +I  +  S N+DY YYL G+       D+ +            D +A K   
Sbjct: 116 QALVAIDRFIKLHQGSPNLDYAYYLKGL--ITFNDDLGWLGKFTGQDLSERDPKAAKEAF 173

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
           +    +VER+ NS Y   A   +    N LA  +V + R+Y +RG Y+AA  R QLV+ +
Sbjct: 174 ESFKVVVERFPNSKYTPDAIDRMRYIVNSLAEADVIVARFYYQRGAYLAAANRAQLVIRD 233

Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           Y  A   EEA+  L ++Y  L +   +++   + +  +P 
Sbjct: 234 YDRAPAVEEALYILTKSYEKLGMTQLSKDSARVFKLNFPD 273


>gi|21232519|ref|NP_638436.1| competence lipoprotein [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66767397|ref|YP_242159.1| competence lipoprotein [Xanthomonas campestris pv. campestris str.
           8004]
 gi|188990498|ref|YP_001902508.1| putative outer membrane lipoprotein [Xanthomonas campestris pv.
           campestris str. B100]
 gi|21114310|gb|AAM42360.1| competence lipoprotein [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66572729|gb|AAY48139.1| competence lipoprotein [Xanthomonas campestris pv. campestris str.
           8004]
 gi|167732258|emb|CAP50450.1| putative outer membrane lipoprotein [Xanthomonas campestris pv.
           campestris]
          Length = 293

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 119/260 (45%), Gaps = 22/260 (8%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           A  I   + + F+V    + ++D   D    V    ++Y K    +++ N++ A   + +
Sbjct: 11  ARLIALMLVMAFVVTGCHRGAKDKNPDEGMPVE---QLYGKGHGLMEKGNWAGAEASYKR 67

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
               +P+     ++++ +A+ QY AGK+    S  + +I  YP  +N+ Y+YYL G+  A
Sbjct: 68  LIAQYPYGPYTEQAMIETAYAQYKAGKHDDTVSSVDRFIRTYPTHRNISYLYYLRGL--A 125

Query: 143 QMIRDVPY------------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
              RD  +            D  + +      + + +RY NS Y   AR  +   R+  A
Sbjct: 126 NSNRDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAPDARKRMIELRDIFA 185

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAR 247
             E++   YYL+R  +V+A  R   +L  Y  +    +A+A L EAY  L    L  +AR
Sbjct: 186 QHELDNALYYLRRDAWVSAAGRANYLLETYPQSAFQYDAVAVLAEAYTHLGNKTLAADAR 245

Query: 248 EVVSLIQERYP--QGYWARY 265
            V+ L   ++P   G W +Y
Sbjct: 246 RVLELNSPQHPWLTGDWPKY 265


>gi|30248521|ref|NP_840591.1| TPR repeat-containing protein [Nitrosomonas europaea ATCC 19718]
 gi|30138407|emb|CAD84417.1| TPR repeat [Nitrosomonas europaea ATCC 19718]
          Length = 255

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 102/206 (49%), Gaps = 14/206 (6%)

Query: 68  LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
           L E N++ A + F      +P+   A+++ L  A+  Y   ++  A +  E +I  YP  
Sbjct: 31  LNEGNYAAAVKLFEALEARYPYGRYAQQAQLEIAYAYYKDQEHASAIAAAERFIQLYPHH 90

Query: 128 KNVDYVYYLVGM-------------SYAQMIRDVP-YDQRATKLMLQYMSRIVERYTNSP 173
           +N+DY YY+ G+             ++  + +D+   D +A++   + + ++V RY +S 
Sbjct: 91  QNIDYAYYIKGLASFNDDQGLMGYITHKIIKQDMSERDAKASRESFESLKQLVTRYPDSK 150

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
           Y   A   +    N LA  E+ + +YY+KR  YVAAI R Q +L  Y      E+A+  +
Sbjct: 151 YTPDALQRMAYLVNALARGEIHVAQYYMKRKAYVAAIKRAQFILEEYPQTPATEDALYIM 210

Query: 234 VEAYVALALMDEAREVVSLIQERYPQ 259
             AY  L + D   +V  +I++ +P+
Sbjct: 211 AVAYGELGMTDLREDVEKVIRKNFPE 236


>gi|297183635|gb|ADI19761.1| hypothetical protein [uncultured gamma proteobacterium EB000_37F04]
          Length = 256

 Score = 87.0 bits (214), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 18/213 (8%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y +A   LK +NFS A          +PF   A ++ L   +  YSA ++  A    + 
Sbjct: 1   MYREAQRHLKNENFSLAVRSLQGLESRYPFGQYAEQAQLELIYAHYSAYEFAAANEAADR 60

Query: 120 YITQYPESKNVDYVYYLVGMS--------YAQMI------RDVPYDQRATKLMLQYMSRI 165
           +I  +P   +VDY YY+ G++        +++ I      RDV + Q A        +++
Sbjct: 61  FIRLHPRHPSVDYAYYMKGLAAYDIEPGFFSRFIPSDDTKRDVSHIQTA----FAEFAQL 116

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           + R+ +S Y   AR  +   RN LA  E+ +  YY +RG Y+AA+ R + V+ +      
Sbjct: 117 LARFPDSAYAPDARQRMVHMRNMLARNEIHVANYYFRRGAYMAALNRGKYVVEHMQQTPS 176

Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
             + +A + +AY+ L L D A + ++++ E YP
Sbjct: 177 VADGLAIMGQAYLLLGLNDLAEDSIAVLCENYP 209


>gi|300691370|ref|YP_003752365.1| lipoprotein, ComL family, tetratricopeptide repeats (TPR) domain
           [Ralstonia solanacearum PSI07]
 gi|299078430|emb|CBJ51082.1| putative lipoprotein, ComL family, tetratricopeptide repeats (TPR)
           domain [Ralstonia solanacearum PSI07]
          Length = 277

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 106/212 (50%), Gaps = 10/212 (4%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            ++Y +A   L   ++SKA +Y+ +    +PF   A+++ + +A+  Y  G+   A +  
Sbjct: 47  NKLYSEAKDALDGGDYSKAVKYYEKLESRYPFGPFAQQAQIETAYANYKDGETAAALAAV 106

Query: 118 EEYITQYPESKNVDYVYYLVGM-SYAQMI--------RDVP-YDQRATKLMLQYMSRIVE 167
           + +I  +P   +VDY YYL G+ ++   +        +D+   D +A +        ++ 
Sbjct: 107 DRFIQLHPNHPSVDYAYYLKGLINFNDNLGWLGRFSNQDLSERDPKAARAAYDAFKTLIT 166

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
           R+ NS Y   A   +    N +A  EV+  RYY +RG Y+AA  R Q  + +Y  A   E
Sbjct: 167 RFPNSKYTPDAAQRMQYIVNAMADHEVQAARYYYRRGAYLAATNRAQEAIKDYDRAPAVE 226

Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           EA+  ++++Y AL + D   +   +I++ YP 
Sbjct: 227 EALYIMMKSYEALGMKDLHDDTERIIKQNYPN 258


>gi|300703939|ref|YP_003745541.1| lipoprotein [Ralstonia solanacearum CFBP2957]
 gi|299071602|emb|CBJ42926.1| putative lipoprotein, ComL family, tetratricopeptide repeats (TPR)
           domain [Ralstonia solanacearum CFBP2957]
          Length = 277

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 106/211 (50%), Gaps = 10/211 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L   ++SKA +Y+ +    +PF   A+++ + +A+  Y  G+   A +  +
Sbjct: 48  KLYSEAKDALDGGDYSKAVKYYEKLESRYPFGPFAQQAQIETAYANYKDGETAAALAAVD 107

Query: 119 EYITQYPESKNVDYVYYLVGM-SYAQMI--------RDVP-YDQRATKLMLQYMSRIVER 168
            +I  +P   +VDY YYL G+ ++   +        +D+   D +A +        ++ R
Sbjct: 108 RFIQLHPNHPSVDYAYYLKGLINFNDNLGWLGRFSNQDLSERDPKAARAAYDAFKTLITR 167

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           + NS Y   A   +    N +A  EV+  RYY +RG Y+AA  R Q  + +Y  A   EE
Sbjct: 168 FPNSKYTPDAAQRMQYIVNAMAEHEVQAARYYYRRGAYLAATNRAQEAIKDYDRAPAVEE 227

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           A+  ++++Y AL + D   +   +I++ YP 
Sbjct: 228 ALYIMMKSYEALGMKDLRDDTERIIKQNYPN 258


>gi|34497648|ref|NP_901863.1| competence lipoprotein ComL [Chromobacterium violaceum ATCC 12472]
 gi|34103504|gb|AAQ59866.1| competence lipoprotein ComL [Chromobacterium violaceum ATCC 12472]
          Length = 264

 Score = 86.7 bits (213), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 109/216 (50%), Gaps = 20/216 (9%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L   N+++A + +      FP+   A+++ +  A+  Y  G+ + A +  +
Sbjct: 34  KLYSEAHDELNSGNYTRAVKLYETLEARFPYGRYAQQAQMDLAYTHYKDGEPELAIASAD 93

Query: 119 EYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSRIV 166
            +I  +P   N+DY+YYL G+ Y             Q + +   D RA +        + 
Sbjct: 94  RFIKLHPTHPNLDYIYYLKGLVYYNDDSGLLAKWAGQDMSER--DPRAAREAFAAFRELT 151

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
            R+ +S Y   A+  +    + L   E+ + RYY+KRG Y+AA  R Q V+ +Y++ ++ 
Sbjct: 152 TRFPSSSYAPDAKAKMIRLVDALGGNEMHVARYYMKRGAYLAAANRAQGVVKDYANTKYP 211

Query: 227 EEAMARLVEAYVAL---ALMDEAREVVSLIQERYPQ 259
           EEA+A +V AY  L    L D+AR V++L    YPQ
Sbjct: 212 EEALAIMVAAYDKLQLPQLRDDARRVLAL---NYPQ 244


>gi|207743016|ref|YP_002259408.1| dna uptake lipoprotein [Ralstonia solanacearum IPO1609]
 gi|206594413|emb|CAQ61340.1| dna uptake lipoprotein [Ralstonia solanacearum IPO1609]
          Length = 277

 Score = 86.7 bits (213), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 106/211 (50%), Gaps = 10/211 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L   ++SKA +Y+ +    +PF   A+++ + +A+  Y  G+   A +  +
Sbjct: 48  KLYSEAKDALDGGDYSKAVKYYEKLESRYPFGPFAQQAQIETAYANYKDGETAAALAAVD 107

Query: 119 EYITQYPESKNVDYVYYLVGM-SYAQMI--------RDVP-YDQRATKLMLQYMSRIVER 168
            +I  +P   +VDY YYL G+ ++   +        +D+   D +A +        ++ R
Sbjct: 108 RFIQLHPNHPSVDYAYYLKGLINFNDNLGWLGRFSNQDLSERDPKAARAAYDAFKTLITR 167

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           + NS Y   A   +    N +A  EV+  RYY +RG Y+AA  R Q  + +Y  A   EE
Sbjct: 168 FPNSKYTPDAAQRMQYIVNAMAEHEVQAARYYYRRGAYLAATNRAQEAIKDYDRAPAVEE 227

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           A+  ++++Y AL + D   +   +I++ YP 
Sbjct: 228 ALYIMMKSYEALGMKDLRDDTERIIKQNYPN 258


>gi|237746822|ref|ZP_04577302.1| competence lipoprotein ComL [Oxalobacter formigenes HOxBLS]
 gi|229378173|gb|EEO28264.1| competence lipoprotein ComL [Oxalobacter formigenes HOxBLS]
          Length = 265

 Score = 86.3 bits (212), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 105/214 (49%), Gaps = 14/214 (6%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   ++  N+ KA EY+ +    +PF   A+++ +  A+  Y   +  QA +  E
Sbjct: 37  KLYREAKDEMRSGNYEKAIEYYEKLESRYPFGVYAQQAQIDIAYAYYRDNEPAQALAAVE 96

Query: 119 EYITQYPESKNVDYVYYLVGM------------SYAQMIRDVPYDQRATKLMLQYMSRIV 166
            +I  +P   N+DY+YYL G+            ++ Q + +   D +A +        +V
Sbjct: 97  RFIKLHPNHPNIDYMYYLRGLINFNDRVGLLNFAFRQDLSER--DPKAAQDAFDSFKLLV 154

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
            RY +S Y K A + +      LA  E+ + +YY +RG Y+AA  R Q  + NY ++   
Sbjct: 155 TRYPDSVYSKDAIYRMKYLVTMLAKYEIHVAKYYYRRGAYLAAANRAQRAINNYPESAVV 214

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           EEA+  L E+Y  L L D + +   + ++ +P  
Sbjct: 215 EEALYILAESYKKLGLYDLSNDADRIFKQNFPDS 248


>gi|83745882|ref|ZP_00942939.1| transmembrane protein [Ralstonia solanacearum UW551]
 gi|83727572|gb|EAP74693.1| transmembrane protein [Ralstonia solanacearum UW551]
          Length = 289

 Score = 86.3 bits (212), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 106/211 (50%), Gaps = 10/211 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L   ++SKA +Y+ +    +PF   A+++ + +A+  Y  G+   A +  +
Sbjct: 60  KLYSEAKDALDGGDYSKAVKYYEKLESRYPFGPFAQQAQIETAYANYKDGETAAALAAVD 119

Query: 119 EYITQYPESKNVDYVYYLVGM-SYAQMI--------RDVP-YDQRATKLMLQYMSRIVER 168
            +I  +P   +VDY YYL G+ ++   +        +D+   D +A +        ++ R
Sbjct: 120 RFIQLHPNHPSVDYAYYLKGLINFNDNLGWLGRFSNQDLSERDPKAARAAYDAFKTLITR 179

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           + NS Y   A   +    N +A  EV+  RYY +RG Y+AA  R Q  + +Y  A   EE
Sbjct: 180 FPNSKYTPDAAQRMQYIVNAMAEHEVQAARYYYRRGAYLAATNRAQEAIKDYDRAPAVEE 239

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           A+  ++++Y AL + D   +   +I++ YP 
Sbjct: 240 ALYIMMKSYEALGMKDLRDDTERIIKQNYPN 270


>gi|73541037|ref|YP_295557.1| transmembrane protein [Ralstonia eutropha JMP134]
 gi|72118450|gb|AAZ60713.1| probable transmembrane protein [Ralstonia eutropha JMP134]
          Length = 271

 Score = 86.3 bits (212), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L   ++S+A + + +    +PF   A+++ + +A+  Y  G+   A +  +
Sbjct: 42  KLYSEAKDALDGGDYSRAVKLYEKLEGRYPFGRYAQQAQIDTAYASYKDGETAAALAAVD 101

Query: 119 EYITQYPESKNVDYVYYLVGM-SYAQMI--------RDVP-YDQRATKLMLQYMSRIVER 168
            +I  +P   N+DY YYL G+ ++   +        +D+   D +A +      + +V R
Sbjct: 102 RFIQLHPSHPNIDYAYYLKGLINFNDNLGWLGRFSGQDLSERDPKAARAAYDAFNTLVTR 161

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           + +S Y   A   +    N LA  EV   RYY KRG Y+AA+ R Q  L +Y  A   EE
Sbjct: 162 FPDSKYTPDAAARMQYIVNSLAQHEVHAARYYYKRGAYLAAVNRAQQALKDYDGAPANEE 221

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
           A+  ++ +Y +L + D   +   +++  +P   + +Y E
Sbjct: 222 ALYIMIRSYDSLGMKDLRDDTARVMERNFPNSDYIKYGE 260


>gi|89901093|ref|YP_523564.1| hypothetical protein Rfer_2315 [Rhodoferax ferrireducens T118]
 gi|89345830|gb|ABD70033.1| putative transmembrane protein [Rhodoferax ferrireducens T118]
          Length = 268

 Score = 86.3 bits (212), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 10/212 (4%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            ++Y +A   L    + KA   F +         +A+++ L  A+ QY +G+  QA +  
Sbjct: 38  NKIYAEAKDELSSGGYDKAVVLFEKLEGRAAGTPLAQQAQLDKAYAQYKSGESAQALATL 97

Query: 118 EEYITQYPESKNVDYVYYL---------VGMSYAQMIRDVP-YDQRATKLMLQYMSRIVE 167
           + ++  +P S  +DY  YL         +G+  A   +D+   DQ+A+K   +    +V 
Sbjct: 98  DRFMKLHPASPALDYALYLKGIINFNDDLGLFSAVTRQDLAERDQKASKESFESFKELVT 157

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
           R+  S Y   AR  +T   N LA  EV + RYY  RG YVAAI R Q+ + +Y      E
Sbjct: 158 RFPESRYTPDARQRMTYIVNSLAQYEVHVARYYYGRGAYVAAINRAQVAVTDYQGVPAVE 217

Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           EA+  +V++Y AL L     +   ++++ YPQ
Sbjct: 218 EALFIIVKSYDALGLTQLRDDAKRVLEKNYPQ 249


>gi|71065815|ref|YP_264542.1| lipoprotein [Psychrobacter arcticus 273-4]
 gi|71038800|gb|AAZ19108.1| possible lipoprotein (DUF0169) [Psychrobacter arcticus 273-4]
          Length = 359

 Score = 86.3 bits (212), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 9/218 (4%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
           VT  + ++  Y  A+  + +  +++A E        +P    A ++LL   + QY +GKY
Sbjct: 42  VTAEKSEQAYYNDAIAQIDKGRYTQAVEDLTNLRTFYPTGQYAEQALLDMMYAQYESGKY 101

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ---------MIRDVPYDQRATKLMLQY 161
           + AA+  E++I  YP +  V Y YY+ G++  Q          +     D    ++    
Sbjct: 102 ETAAASAEQFIRLYPSNPQVSYAYYVRGVANMQGSSEGLKLFKLNQAERDTAYYRIAFAN 161

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
              ++ +Y NSPY   A   +T   NQ A  E+    +Y++R  YVAA+ R + V   Y 
Sbjct: 162 FQELLNKYPNSPYASDAAQRMTFIYNQFAESEMSAANWYIEREAYVAAVNRAKWVFQYYP 221

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            +E   +A+  L  ++  L L D A+E  +L+Q  YP 
Sbjct: 222 LSESVPDAITVLAYSHEKLGLTDLAKEYKTLLQINYPN 259


>gi|260912660|ref|ZP_05919146.1| DNA uptake lipoprotein [Pasteurella dagmatis ATCC 43325]
 gi|260633038|gb|EEX51203.1| DNA uptake lipoprotein [Pasteurella dagmatis ATCC 43325]
          Length = 291

 Score = 85.9 bits (211), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 101/210 (48%), Gaps = 10/210 (4%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           R + E+Y     +L++ ++S++  Y       FP +  + ++LL   F  Y    Y +  
Sbjct: 61  RPEEELYNAGQTYLQDGDYSQSIRYLEAVRNRFPGSSHSEQALLNLIFANYKTQDYTKTL 120

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQM----IRDVPYDQRAT------KLMLQYMSR 164
              + ++ +YP+S ++DYV Y+ G++ + +    I+D+    RAT      K        
Sbjct: 121 VYADRFLQEYPQSSHLDYVLYMAGLTNSALGDNYIQDLFGVDRATRENSSIKAAFANFQT 180

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V+ + NSPY K A   +   +  LA  E+ I ++Y KR  ++A   R   +L  Y D +
Sbjct: 181 LVQHFPNSPYAKDALARMVYIKASLARHELSIAKFYAKRDAHIAVANRVVGMLQQYPDTQ 240

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQ 254
              EA+  + +AY  + L D A +   +I+
Sbjct: 241 ATHEALPLMQQAYEKMNLTDLAAQTAKIIE 270


>gi|94310294|ref|YP_583504.1| hypothetical protein Rmet_1352 [Cupriavidus metallidurans CH34]
 gi|93354146|gb|ABF08235.1| DNA uptake lipoprotein [Cupriavidus metallidurans CH34]
          Length = 278

 Score = 85.9 bits (211), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 106/217 (48%), Gaps = 10/217 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L   ++++A + + +    +PF   A+++ + +A+  Y  G+   A +  +
Sbjct: 49  KLYSEAKDALDGGDYTRAVKLYEKLEGRYPFGRYAQQAQIDTAYANYKDGETAAALAAVD 108

Query: 119 EYITQYPESKNVDYVYYLVGM-SYAQMI--------RDVP-YDQRATKLMLQYMSRIVER 168
            +I  +P   N+DY YYL G+ ++   +        +D+   D +A +        ++ R
Sbjct: 109 RFIQLHPSHPNIDYAYYLKGLINFNDNLGWLGRFSGQDLSERDPKAARAAYDAFQILITR 168

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y +S Y   A   +    N LA  EV   RYY +RG Y+AA+ R Q  L +Y  A   EE
Sbjct: 169 YPDSKYTPDATLRMQYIVNSLAQHEVHAARYYYRRGAYLAAVNRAQQALKDYDGAPANEE 228

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
           A+  +V +Y AL + D   +   +++  YP   + +Y
Sbjct: 229 ALYIMVRSYDALGMKDLRDDAARVMERNYPNSDYIKY 265


>gi|114331226|ref|YP_747448.1| TPR repeat-containing protein [Nitrosomonas eutropha C91]
 gi|114308240|gb|ABI59483.1| TPR repeat [Nitrosomonas eutropha C91]
          Length = 257

 Score = 85.9 bits (211), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 14/207 (6%)

Query: 68  LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
           L E N+S A + F      +P+   A+++ L  A+  Y   +   A +  + +I  YP  
Sbjct: 33  LNEGNYSAAVKLFEALEARYPYGRFAQQAQLEIAYAYYKDQEQASAIAAADRFIQLYPHH 92

Query: 128 KNVDYVYYLVGMS------------YAQMIRD--VPYDQRATKLMLQYMSRIVERYTNSP 173
            N+DY YY+ G++              ++I+      D +A++   +    +V RY +S 
Sbjct: 93  HNIDYAYYIKGLASFNDDQGLLGYITTKIIKQDLSERDAKASRESFEDFKLLVTRYPDSK 152

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
           Y   A   +    N LA  E+ + RYY+KR  Y+AA+ R Q VL  Y      EEA+  +
Sbjct: 153 YTPDALQRMAYLVNALARGEIHVARYYMKRKAYIAALRRAQFVLEEYPQTPATEEALYIM 212

Query: 234 VEAYVALALMDEAREVVSLIQERYPQG 260
             AY  L L+D   +   +I++ +P+ 
Sbjct: 213 ASAYNELGLIDLREDTEKVIKKNFPES 239


>gi|329902612|ref|ZP_08273173.1| putative component of the lipoprotein assembly complex (forms a
           complex with YaeT, YfgL, and NlpB) [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327548720|gb|EGF33363.1| putative component of the lipoprotein assembly complex (forms a
           complex with YaeT, YfgL, and NlpB) [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 265

 Score = 85.9 bits (211), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 112/252 (44%), Gaps = 19/252 (7%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           AL + F+I+ C L+  +   +++             ++Y +A   +   N+    +Y+ +
Sbjct: 10  ALALVFTISACGLLPEKIDETKNWS---------AAKLYAEARDEISTGNYETGIKYYER 60

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM--- 139
               +PF   A+++ +  A+  Y      QA +  E +I  +P   NVDY+YYL G+   
Sbjct: 61  LESRYPFGTFAQQAQMEVAYAYYRQSDQAQALAAVERFIKLHPNHPNVDYMYYLRGLINF 120

Query: 140 -------SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
                   +         D +A     +   ++VER+ +S Y   AR  +    N +A  
Sbjct: 121 NDKLGLFDFVSRQDATERDPKAAHEAFESFKQLVERFPDSIYAADARLRMKYLVNAIAQH 180

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           EV +  YY +RG YVAA+ R Q  +  Y  A   EEA+  +  +Y  L + +   +   +
Sbjct: 181 EVHVANYYFRRGAYVAAVNRAQFAVKEYPTAPATEEALFVMTRSYDELGMPELRDDAGRV 240

Query: 253 IQERYPQGYWAR 264
           +++ +P   + R
Sbjct: 241 MKQNFPNSVYYR 252


>gi|241663188|ref|YP_002981548.1| outer membrane assembly lipoprotein YfiO [Ralstonia pickettii 12D]
 gi|240865215|gb|ACS62876.1| outer membrane assembly lipoprotein YfiO [Ralstonia pickettii 12D]
          Length = 285

 Score = 85.5 bits (210), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 107/211 (50%), Gaps = 10/211 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L   +++KA +Y+ +    +PF   A+++ + +A+  Y  G+   A +  +
Sbjct: 56  KLYSEAKDSLDGGDYAKAVKYYEKLESRYPFGPYAQQAQIETAYANYKDGETAAALAAVD 115

Query: 119 EYITQYPESKNVDYVYYLVGM-SYAQMI--------RDVP-YDQRATKLMLQYMSRIVER 168
            +I  +P   +VDY YYL G+ ++   +        +D+   D +A +        ++ R
Sbjct: 116 RFIQLHPNHPSVDYAYYLKGLINFNDNLGWLGRFSNQDLSERDPKAARAAYDAFKTLITR 175

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           + NS Y   A   +    N +A  EV   RYY +RG Y+AA+ R Q  + +Y  A   EE
Sbjct: 176 FPNSKYTPDATQRMQYIVNAMAEHEVGAARYYYRRGAYLAAVNRAQDAIKDYDRAPAVEE 235

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           A+  ++++Y AL + D   +   +I++ YP+
Sbjct: 236 ALYIMMKSYEALGMKDMRDDTERIIKQNYPK 266


>gi|52841419|ref|YP_095218.1| competence lipoprotein ComL [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52628530|gb|AAU27271.1| competence lipoprotein ComL [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 260

 Score = 85.5 bits (210), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 114/249 (45%), Gaps = 26/249 (10%)

Query: 30  IAVCFLVG----------WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           I V FL+G          W +    +     +T     +++Y  A   LK++ ++ A + 
Sbjct: 7   IHVLFLIGLVVGISSCTKWGKDDEDNNPYKGMT----AKQLYTAAQTSLKKEEYATAAKQ 62

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
                  +PF+     S +   +  Y    Y  AA+  E +I  YP +KNVDY YY+ G+
Sbjct: 63  LEAMESMYPFSDYTESSQMQLIYAYYKDEDYPSAAATAERFIHLYPRAKNVDYAYYMRGL 122

Query: 140 SYAQMIRDV-----PYDQR------ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +  Q  R V     P D+        T+ ++ + + +++++ +S Y   A   +   RN 
Sbjct: 123 ANFQQTRGVFAKMLPMDESWRDPGTQTQALVDFAT-LIQKFPDSKYKANALQRMIYLRNM 181

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
            A  E+ +  YY KR  YVAAI R   ++ NY  A  A++A+  + EA  AL L   A +
Sbjct: 182 FAQHELNVSLYYFKRKMYVAAIERASYLVKNYPQAPSAQKALVVMYEANKALGLNKAAED 241

Query: 249 VVSLIQERY 257
            +++ +  Y
Sbjct: 242 AMAVYKATY 250


>gi|77164235|ref|YP_342760.1| transmembrane protein [Nitrosococcus oceani ATCC 19707]
 gi|254435638|ref|ZP_05049145.1| outer membrane assembly lipoprotein YfiO [Nitrosococcus oceani
           AFC27]
 gi|76882549|gb|ABA57230.1| probable transmembrane protein [Nitrosococcus oceani ATCC 19707]
 gi|207088749|gb|EDZ66021.1| outer membrane assembly lipoprotein YfiO [Nitrosococcus oceani
           AFC27]
          Length = 261

 Score = 85.5 bits (210), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 102/208 (49%), Gaps = 10/208 (4%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +A   L   ++ KA  ++ Q    +PF   A+++LL SA+  Y   + + A +  + +
Sbjct: 39  YAEAKTALDAGDYQKAISFYEQLEARYPFGAYAQQALLESAYAYYKFNEPESALAALDRF 98

Query: 121 ITQYPESKNVDYVYYL---------VGMSYAQMIRD-VPYDQRATKLMLQYMSRIVERYT 170
           I  YP + ++DY +YL         VG+    + RD    D  + +  L+    +++R+ 
Sbjct: 99  IRLYPLNSHMDYAHYLKGLVSFHRGVGLVEKYIPRDETQRDPESARNALKSFKTLIQRFP 158

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
           +S Y + +   +   RN+LA  E+ +  YY++RG Y+ AI R + V+ NY       EA+
Sbjct: 159 DSKYAEDSAQRIVYLRNRLAQHEINVAHYYMRRGAYIGAINRAKYVVENYQRTPPVPEAL 218

Query: 231 ARLVEAYVALALMDEAREVVSLIQERYP 258
             +   Y  L L +   + + +++  +P
Sbjct: 219 TIMARGYEILGLNELKEDTLRVLEASFP 246


>gi|148358772|ref|YP_001249979.1| competence lipoprotein ComL [Legionella pneumophila str. Corby]
 gi|296106817|ref|YP_003618517.1| DNA uptake lipoprotein [Legionella pneumophila 2300/99 Alcoy]
 gi|148280545|gb|ABQ54633.1| competence lipoprotein ComL [Legionella pneumophila str. Corby]
 gi|295648718|gb|ADG24565.1| DNA uptake lipoprotein [Legionella pneumophila 2300/99 Alcoy]
          Length = 257

 Score = 85.5 bits (210), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 114/249 (45%), Gaps = 26/249 (10%)

Query: 30  IAVCFLVG----------WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           I V FL+G          W +    +     +T     +++Y  A   LK++ ++ A + 
Sbjct: 4   IHVLFLIGLVVGISSCTKWGKDDEDNNPYKGMT----AKQLYTAAQTSLKKEEYATAAKQ 59

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
                  +PF+     S +   +  Y    Y  AA+  E +I  YP +KNVDY YY+ G+
Sbjct: 60  LEAMESMYPFSDYTESSQMQLIYAYYKDEDYPSAAATAERFIHLYPRAKNVDYAYYMRGL 119

Query: 140 SYAQMIRDV-----PYDQR------ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +  Q  R V     P D+        T+ ++ + + +++++ +S Y   A   +   RN 
Sbjct: 120 ANFQQTRGVFAKMLPMDESWRDPGTQTQALVDFAT-LIQKFPDSKYKANALQRMIYLRNM 178

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
            A  E+ +  YY KR  YVAAI R   ++ NY  A  A++A+  + EA  AL L   A +
Sbjct: 179 FAQHELNVSLYYFKRKMYVAAIERASYLVKNYPQAPSAQKALVVMYEANKALGLNKAAED 238

Query: 249 VVSLIQERY 257
            +++ +  Y
Sbjct: 239 AMAVYKATY 247


>gi|187929000|ref|YP_001899487.1| outer membrane assembly lipoprotein YfiO [Ralstonia pickettii 12J]
 gi|187725890|gb|ACD27055.1| outer membrane assembly lipoprotein YfiO [Ralstonia pickettii 12J]
          Length = 258

 Score = 85.5 bits (210), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 107/212 (50%), Gaps = 10/212 (4%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            ++Y +A   L   +++KA +Y+ +    +PF   A+++ + +A+  Y  G+   A +  
Sbjct: 28  NKLYSEAKDSLDGGDYAKAVKYYEKLESRYPFGQYAQQAQIETAYANYKDGETAAALAAV 87

Query: 118 EEYITQYPESKNVDYVYYLVGM-SYAQMI--------RDVP-YDQRATKLMLQYMSRIVE 167
           + +I  +P   +VDY YYL G+ ++   +        +D+   D +A +        ++ 
Sbjct: 88  DRFIQLHPNHPSVDYAYYLKGLINFNDNLGWLGRFSNQDLSERDPKAARAAYDAFKTLIT 147

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
           R+ NS Y   A   +    N +A  EV   RYY +RG Y+AA+ R Q  + +Y  A   E
Sbjct: 148 RFPNSKYTPDATQRMQYIVNAMAEHEVGAARYYYRRGAYLAAVNRAQDAIKDYDRAPAVE 207

Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           EA+  ++++Y AL + D   +   +I++ YP+
Sbjct: 208 EALYIMMKSYEALGMKDMRDDTERIIKQNYPK 239


>gi|54294130|ref|YP_126545.1| hypothetical protein lpl1194 [Legionella pneumophila str. Lens]
 gi|54297143|ref|YP_123512.1| hypothetical protein lpp1188 [Legionella pneumophila str. Paris]
 gi|53750928|emb|CAH12339.1| hypothetical protein lpp1188 [Legionella pneumophila str. Paris]
 gi|53753962|emb|CAH15433.1| hypothetical protein lpl1194 [Legionella pneumophila str. Lens]
 gi|307609941|emb|CBW99469.1| hypothetical protein LPW_12421 [Legionella pneumophila 130b]
          Length = 257

 Score = 85.5 bits (210), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 114/249 (45%), Gaps = 26/249 (10%)

Query: 30  IAVCFLVG----------WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           I V FL+G          W +    +     +T     +++Y  A   LK++ ++ A + 
Sbjct: 4   IHVLFLIGLVVGISSCTKWGKDDEDNNPYKGMT----AKQLYTAAQTSLKKEEYATAAKQ 59

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
                  +PF+     S +   +  Y    Y  AA+  E +I  YP +KNVDY YY+ G+
Sbjct: 60  LEAMESMYPFSDYTESSQMQLIYAYYKDEDYPSAAATAERFIHLYPRAKNVDYAYYMRGL 119

Query: 140 SYAQMIRDV-----PYDQR------ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +  Q  R V     P D+        T+ ++ + + +++++ +S Y   A   +   RN 
Sbjct: 120 ANFQQTRGVFAKMLPMDESWRDPGTQTQALVDFAT-LIQKFPDSKYKANALQRMIYLRNM 178

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
            A  E+ +  YY KR  YVAAI R   ++ NY  A  A++A+  + EA  AL L   A +
Sbjct: 179 FAQHELNVSLYYFKRKMYVAAIERASYLVKNYPQAPSAQKALVVMYEANKALGLNKAAED 238

Query: 249 VVSLIQERY 257
            +++ +  Y
Sbjct: 239 AMAVYKATY 247


>gi|261856620|ref|YP_003263903.1| outer membrane assembly lipoprotein YfiO [Halothiobacillus
           neapolitanus c2]
 gi|261837089|gb|ACX96856.1| outer membrane assembly lipoprotein YfiO [Halothiobacillus
           neapolitanus c2]
          Length = 273

 Score = 85.5 bits (210), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 14/208 (6%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y++A   ++  ++  A + F      +PF     ++ L  A+  Y   +   A +  +
Sbjct: 55  QLYDEASSAMRRDDYGTAIKKFETLEGRYPFGAYTEQAQLEVAYAYYKYNEPDSAIAAAD 114

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY------------MSRIV 166
            YI  +P+ KNVDY  Y+ G+S   M R      +  K  L Y             S +V
Sbjct: 115 RYIQIHPQGKNVDYALYIKGLS--NMDRGDSLINKIAKPNLAYRDQSILHNAYAAFSELV 172

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
            R+ +S YV  A   +   RN LA  E+ + RYY+KRG ++AA  R Q  L+ Y+ +   
Sbjct: 173 TRFPDSKYVDDASVRLIKIRNDLAEHEIYVARYYMKRGAWLAAANRAQTALSKYNGSTST 232

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQ 254
             A+  L+ AY  L L  EA +   +++
Sbjct: 233 IPALEILISAYKKLGLKTEAADAEQILK 260


>gi|292490723|ref|YP_003526162.1| outer membrane assembly lipoprotein YfiO [Nitrosococcus halophilus
           Nc4]
 gi|291579318|gb|ADE13775.1| outer membrane assembly lipoprotein YfiO [Nitrosococcus halophilus
           Nc4]
          Length = 260

 Score = 85.5 bits (210), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 103/208 (49%), Gaps = 10/208 (4%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +A   L   N+ +A   + Q    +PF   A+++LL SA+  Y   + + A +  + +
Sbjct: 38  YSEAKAALNSGNYQQAITLYEQLEARYPFGVYAQQALLESAYAYYKFDEPESALAALDRF 97

Query: 121 ITQYPESKNVDYVYYLVGM-----SYAQMIRDVPYDQ-----RATKLMLQYMSRIVERYT 170
           I  YP + ++DY +YL G+         + + +P D+      + +  L+    +V+R+ 
Sbjct: 98  IRLYPLNPHMDYAHYLKGLVNFHRGIGLIEKYIPRDESQRDPESARDALKDFRTLVKRFP 157

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
           +S Y K     +   RN+LA  E+ + +YY++RG Y+ AI R + V+ NY       EA+
Sbjct: 158 DSRYAKDGAQRIVYLRNRLAQHEINVAQYYMRRGAYIGAINRAKYVVENYQRTPTVPEAL 217

Query: 231 ARLVEAYVALALMDEAREVVSLIQERYP 258
             +   Y  L L + A + + +++  +P
Sbjct: 218 TIMARGYKVLGLDELAEDTLRVLETNFP 245


>gi|194289463|ref|YP_002005370.1| lipoprotein, coml family, tetratricopeptide repeats (tpr) domain
           [Cupriavidus taiwanensis LMG 19424]
 gi|193223298|emb|CAQ69303.1| putative lipoprotein, ComL family, tetratricopeptide repeats (TPR)
           domain [Cupriavidus taiwanensis LMG 19424]
          Length = 276

 Score = 85.1 bits (209), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 107/217 (49%), Gaps = 10/217 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L   ++++A + + +    +PF   A+++ + +A+  Y  G+   A +  +
Sbjct: 47  KLYSEAKDALDGGDYTRAVKLYEKLEGRYPFGRYAQQAQIDTAYANYKDGETAAALAAVD 106

Query: 119 EYITQYPESKNVDYVYYLVGM-SYAQMI--------RDVP-YDQRATKLMLQYMSRIVER 168
            +I  +P   N+DY YYL G+ ++   +        +D+   D +A +        ++ R
Sbjct: 107 RFIQLHPNHPNIDYAYYLKGLINFNDNLGWLGRFSGQDLSERDPKAARAAYDAFHTLITR 166

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y  S Y   A   +    N LA  EV   RYY +RG Y+AA+ R Q  L +Y  A   EE
Sbjct: 167 YPESKYTPDATLRMQYIVNSLAQHEVHAARYYFRRGAYLAAVNRAQQSLKDYDGAPANEE 226

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
           A+  ++ +Y A+ + D   +   ++++ +P+  + +Y
Sbjct: 227 ALYIMIRSYDAMGMKDLRDDTARVMEKNFPESDFIKY 263


>gi|160872537|ref|ZP_02062669.1| competence lipoprotein ComL [Rickettsiella grylli]
 gi|159121336|gb|EDP46674.1| competence lipoprotein ComL [Rickettsiella grylli]
          Length = 250

 Score = 85.1 bits (209), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 101/214 (47%), Gaps = 14/214 (6%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           +VY+ A   L +  FS+A + +   +  +PF   + K+ L   +  Y  G    A +  +
Sbjct: 38  QVYQNARASLLDGEFSQAIKSYEALAVLYPFNRYSEKAQLGLIYAYYKDGDSPSAKTAAQ 97

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRD-------VPYD-----QRATKLMLQYMSRIV 166
            +I  YP S+ +DY YY+  M  A M +D       VP D         +L  Q  + ++
Sbjct: 98  RFIYLYPHSQYIDYAYYMRAM--ADMDQDRGWYLRYVPIDLALRDPGTMRLAYQEFAELI 155

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
            RY +SPYV  AR  +   RN  A  E+ I  YY +R  Y+AA  R   ++  Y  A   
Sbjct: 156 RRYPDSPYVPDARQRMIYLRNLFARYELHIADYYFRRKAYIAAANRANEIIQQYQGAPEV 215

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           + A+  +++AY  L L   AR+ +++ +  YP  
Sbjct: 216 KHALMIMIKAYRILGLETLARQSLAIYRLNYPDS 249


>gi|17546346|ref|NP_519748.1| hypothetical protein RSc1627 [Ralstonia solanacearum GMI1000]
 gi|17428643|emb|CAD15329.1| probable dna uptake lipoprotein transmembrane [Ralstonia
           solanacearum GMI1000]
          Length = 289

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 105/211 (49%), Gaps = 10/211 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L   ++SKA +Y+ +    +PF   A+++ + +A+  Y  G+   A +  +
Sbjct: 60  KLYSEAKDALDGGDYSKAVKYYEKLESRYPFGPFAQQAQIETAYANYKDGETAAALAAVD 119

Query: 119 EYITQYPESKNVDYVYYLVGM-SYAQMI--------RDVP-YDQRATKLMLQYMSRIVER 168
            +I  +P   +VDY YYL G+ ++   +        +D+   D +A +        ++ R
Sbjct: 120 RFIQLHPNHPSVDYAYYLKGLINFNDNLGWLGRFSNQDLSERDPKAARAAYDAFKTLITR 179

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           + NS Y   A   +    N +A  EV+  RYY +RG Y+AA  R Q  + +Y  A   EE
Sbjct: 180 FPNSKYAPDAAQRMQYIVNAMAEHEVQAARYYYRRGAYLAATNRAQEAIKDYDRAPAVEE 239

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            +  ++++Y AL + D   +   +I++ YP 
Sbjct: 240 GLYIMMKSYEALGMKDLRDDTERIIKQNYPN 270


>gi|319763345|ref|YP_004127282.1| outer membrane assembly lipoprotein yfio [Alicycliphilus
           denitrificans BC]
 gi|330825579|ref|YP_004388882.1| outer membrane assembly lipoprotein YfiO [Alicycliphilus
           denitrificans K601]
 gi|317117906|gb|ADV00395.1| outer membrane assembly lipoprotein YfiO [Alicycliphilus
           denitrificans BC]
 gi|329310951|gb|AEB85366.1| outer membrane assembly lipoprotein YfiO [Alicycliphilus
           denitrificans K601]
          Length = 265

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/178 (32%), Positives = 86/178 (48%), Gaps = 10/178 (5%)

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM----------SY 141
           +A+++ L  A+ QY  G+  QA +  + ++  +P S  +DY  YL G+          S+
Sbjct: 69  LAQQAQLEKAYAQYKGGEKAQAIATLDRFMKLHPASPALDYALYLKGLVNFNENLGLFSW 128

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
                    DQ+A K   +    +V R+  S Y   AR  +T   N LA  EV + RYY 
Sbjct: 129 LSRQDLSERDQKAAKDSFESFRELVTRFPESRYTPDARLRMTYIVNSLAQYEVHVARYYY 188

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           +RG YVAAI R Q  + +Y D    EEA+  LV +Y AL +     +   ++Q  YP 
Sbjct: 189 QRGAYVAAISRAQSAITDYKDVPATEEALYILVRSYDALGMTQLRDDAQRVLQASYPN 246


>gi|294634725|ref|ZP_06713256.1| competence lipoprotein ComL [Edwardsiella tarda ATCC 23685]
 gi|291091855|gb|EFE24416.1| competence lipoprotein ComL [Edwardsiella tarda ATCC 23685]
          Length = 245

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 10/205 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y  A   L++ NF  A          +PF   +++  L   +  Y +     A +  +
Sbjct: 34  EIYATAQQKLQDGNFKAAITQLEALDNRYPFGPYSQQVQLDLIYAYYKSADLPMAQATID 93

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168
            +I   P S+N+ YV Y+ G++   M          I     D    +   +  S++V+R
Sbjct: 94  RFIRLNPTSQNMPYVLYMRGLTDMAMDDSALQGFFGIDRSDRDPEHARQAFRDFSQLVQR 153

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS Y   A   +   +N+LA  E+ + R+Y KRG YVA + R + +L NY D +   +
Sbjct: 154 YPNSQYSSDATKRLIFLKNRLAKHELAVARFYTKRGAYVAVVNRVEQMLRNYPDTQATRD 213

Query: 229 AMARLVEAYVALALMDEAREVVSLI 253
           A+  +  AY  L LM EA +V  +I
Sbjct: 214 ALPLMENAYRQLGLMSEAAKVQKII 238


>gi|300114964|ref|YP_003761539.1| outer membrane assembly lipoprotein YfiO [Nitrosococcus watsonii
           C-113]
 gi|299540901|gb|ADJ29218.1| outer membrane assembly lipoprotein YfiO [Nitrosococcus watsonii
           C-113]
          Length = 262

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 106/208 (50%), Gaps = 10/208 (4%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +A   L   ++ KA  ++ Q    +PF   A+++LL SA+  Y   + + A +  + +
Sbjct: 40  YAEAKAALNAGDYQKAITFYEQLEARYPFGVYAQQALLESAYAYYKFNEPESALAALDRF 99

Query: 121 ITQYPESKNVDYVYYLVGM-SYAQMI----RDVPYDQ-----RATKLMLQYMSRIVERYT 170
           I  YP + ++DY +YL G+ S+ + +    R +P D+      + +  L+    +++R+ 
Sbjct: 100 IRLYPLNSHMDYAHYLKGLVSFHRGVGIVERYIPRDETQRDPESARNALKSFKTLIQRFP 159

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
           +S Y + +   +   RN+LA  E+ +  YY++RG Y+ AI R + V+ NY       EA+
Sbjct: 160 DSKYAEDSAQRIVYLRNRLAQHEINVAHYYMRRGAYIGAINRAKYVVENYQRTPPVPEAL 219

Query: 231 ARLVEAYVALALMDEAREVVSLIQERYP 258
             +   Y  L L +   + + +++  +P
Sbjct: 220 TIMARGYEILGLNELKEDTLRILELSFP 247


>gi|114321698|ref|YP_743381.1| putative lipoprotein [Alkalilimnicola ehrlichii MLHE-1]
 gi|114228092|gb|ABI57891.1| putative lipoprotein [Alkalilimnicola ehrlichii MLHE-1]
          Length = 254

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 103/211 (48%), Gaps = 12/211 (5%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y++A   L+  N++ A E   +    FPF   A ++ L   +  Y AG+ +   +  +
Sbjct: 38  ELYQQARRQLENGNYTMAVETLERLQGRFPFGPFATQAQLDIIYAYYQAGELESTIAAAD 97

Query: 119 EYITQYPESKNVDYVYYLVGMSYA-----------QMIRDVPYDQRATKLMLQYMSRIVE 167
            ++  YP   NV Y  Y+ G++ A            + R +   Q   +  + +   +++
Sbjct: 98  RFMRLYPRDPNVAYARYMRGLANAGVGDEFFTRVFNLDRSLRDPQPLRRAFVDFRE-LIQ 156

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
           R+ +S YV  AR  +   R+ LA  E+ + R+YL+R   VAA+ R + VL  Y      E
Sbjct: 157 RHPDSEYVDDARERMQEIRDLLARHEIYVARFYLRRDAPVAAVGRARTVLQEYQGTGAVE 216

Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYP 258
           +A+  LVEAY  L L D  ++V  +I E +P
Sbjct: 217 DALEVLVEAYGMLELADLQQDVRRVIGENFP 247


>gi|113867447|ref|YP_725936.1| DNA uptake lipoprotein [Ralstonia eutropha H16]
 gi|113526223|emb|CAJ92568.1| DNA uptake lipoprotein [Ralstonia eutropha H16]
          Length = 276

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 106/217 (48%), Gaps = 10/217 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L   ++++A + + +    +PF   A+++ + +A+  Y  G+   A +  +
Sbjct: 47  KLYSEAKDALDGGDYTRAVKLYEKLEGRYPFGRYAQQAQIDTAYANYKDGETAAALAAVD 106

Query: 119 EYITQYPESKNVDYVYYLVGM-SYAQMI--------RDVP-YDQRATKLMLQYMSRIVER 168
            +I  +P   N+DY YYL G+ ++   +        +D+   D +A +      + ++ R
Sbjct: 107 RFIQLHPNHPNIDYAYYLKGLINFNDNLGWLGRFSGQDLSERDPKAARAAYDAFNTLITR 166

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y  S Y   A   +    N LA  EV   RYY +RG Y+AA+ R Q  L +Y  A   EE
Sbjct: 167 YPESKYTPDATLRMQYIVNSLAQHEVHAARYYYRRGAYLAAVNRAQQALKDYDGAPANEE 226

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
           A+  +V +Y A+ + D   +   +++  +P   + +Y
Sbjct: 227 ALYIMVRSYDAMGMKDLRDDTARVMERNFPDSDFIKY 263


>gi|332290083|ref|YP_004420935.1| outer membrane protein assembly complex subunit YfiO
           [Gallibacterium anatis UMN179]
 gi|330432979|gb|AEC18038.1| outer membrane protein assembly complex subunit YfiO
           [Gallibacterium anatis UMN179]
          Length = 267

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 107/216 (49%), Gaps = 15/216 (6%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y+KA  +L+++N+ +A  Y       FP+   A+++ L   +  Y    Y    S  E
Sbjct: 37  ELYQKAQEYLQDENYRQAIRYLEATDNRFPYGEYAQQADLNLIYAYYRNEDYVNTLSTAE 96

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD-------QRATKL---MLQYMSRIVER 168
            Y+ +YP+  ++DYV Y+ G++   +  ++  D        R TK           +V  
Sbjct: 97  RYLQKYPQGPHLDYVLYIAGLTNMALGDNLFQDFFGVERSSRETKPREDAYHNFETLVRY 156

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ-LVLANYSDAEHAE 227
           + NS Y   A+  ++  R  LA  + EI  +YLKR  YVA + R Q  +L  Y D  +A 
Sbjct: 157 FPNSEYTPDAKQRMSYIRESLAKHQYEIAEFYLKRDAYVAVVNRIQDNLLRLYPDTSYAY 216

Query: 228 EAMARLVEAYVALALMDEAREVVSLI----QERYPQ 259
           +A+  L +AY AL L  +A+E+  ++    Q+ +P+
Sbjct: 217 KALPMLQQAYAALHLDKQAQEIAQVLANSKQKEFPE 252


>gi|167855785|ref|ZP_02478538.1| putative lipoprotein [Haemophilus parasuis 29755]
 gi|219871127|ref|YP_002475502.1| DNA uptake lipoprotein, TPR repeat-containing protein [Haemophilus
           parasuis SH0165]
 gi|167853064|gb|EDS24325.1| putative lipoprotein [Haemophilus parasuis 29755]
 gi|219691331|gb|ACL32554.1| DNA uptake lipoprotein, TPR repeat-containing protein [Haemophilus
           parasuis SH0165]
          Length = 259

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 116/240 (48%), Gaps = 11/240 (4%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
           F+S+A   L G           D    +  Q E+Y+K   +L++ +++ A  Y +     
Sbjct: 4   FYSLASLVLAGLLVVGCSGSKKDEFEGIPSQ-ELYDKGQAYLQDGDYNNAIRYLDAVDLR 62

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM-- 144
                   +  L   +  Y  G+Y +A  + E +   +P S ++DYVYYL G++YA++  
Sbjct: 63  SNQGAYDEQVQLSLIYANYKLGEYYKALEVAERFARTHPNSSSMDYVYYLAGLNYARLGD 122

Query: 145 --IRDVPYDQRATKLMLQYMS------RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
             I+D     RA++ +    +       I  +Y NS Y   A+ ++   +N+LA  E++I
Sbjct: 123 NWIQDFFGINRASRAIENIRNAYGNFQTITFQYPNSQYTSDAQNWMIYLKNRLAEHELKI 182

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
             +Y++R  YVA + R   +L  Y D +   +A+  L  ++ A+ + D A+++  +I+E 
Sbjct: 183 AEFYMERKAYVAVVNRVDEMLRLYPDTQATYQALPLLKTSFEAMGIKDSAQKISEMIKEN 242


>gi|86159785|ref|YP_466570.1| hypothetical protein Adeh_3366 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85776296|gb|ABC83133.1| tetratricopeptide repeat protein [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 262

 Score = 84.3 bits (207), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 104/211 (49%), Gaps = 14/211 (6%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E Y+  +  LK  NF++A ++F      +PF+  A  S L  A V++   +Y +AA   +
Sbjct: 39  ENYQAGMDELKADNFTEAVKFFEFVKTKYPFSKFAALSELRLADVKFKQDRYLEAAEAYK 98

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVP-----------YDQRATKLMLQYMSRIVE 167
           +++  +P  ++VDY  Y  G+SY    +D P            DQR  +  +Q ++  V+
Sbjct: 99  QFVQLHPTHEDVDYAEYRSGLSY---FKDAPGEFALFPPAAEKDQRQAEKAVQVLTDFVQ 155

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
             T S Y+  A+  +   + +LAA+E  +  YY KR  +  A  R++ ++  Y  + H  
Sbjct: 156 TRTQSKYLPDAKKVLGEAQTRLAAREWYVAEYYFKRSLWAGAAGRYETLVDRYPGSRHEP 215

Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYP 258
           EA+ +L  A + +     AR+ +  +  ++P
Sbjct: 216 EALWKLASACLKMDEKHRARKALQQLIVKHP 246


>gi|206890303|ref|YP_002248672.1| tetratricopeptide repeat domain protein [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206742241|gb|ACI21298.1| tetratricopeptide repeat domain protein [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 248

 Score = 84.3 bits (207), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 80/148 (54%)

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           +I  YPES    Y  Y +GM+Y + I          +  L    ++ + Y   PY     
Sbjct: 96  FIELYPESTYAPYAQYSIGMAYFRQIEGPERGAGTAQKALNEFLKLEKMYPRHPYGDILP 155

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             +   RN +A  E+ IG++Y K+G Y AAI RF+ ++ NY D ++ +E +  LV++Y  
Sbjct: 156 LRIQKCRNIIAEGELIIGKFYHKKGSYTAAIGRFEGIVKNYPDFKNLDETLYLLVDSYKN 215

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVE 267
           L ++D+A++ + L++E++P   +A+  E
Sbjct: 216 LNMLDKAKQYLKLLKEKFPDSQFAKKAE 243


>gi|297170256|gb|ADI21293.1| DNA uptake lipoprotein [uncultured gamma proteobacterium
           HF0010_09F21]
          Length = 240

 Score = 84.3 bits (207), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 93/195 (47%), Gaps = 10/195 (5%)

Query: 68  LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
           +  +N++ A E   +  R +PF   A ++     +V Y  G +  + +  E++I  YP +
Sbjct: 42  ISSRNYTGAAEALFRIERSYPFGVYAEQARADLIYVHYMTGNFDASYAAAEKFIRLYPRN 101

Query: 128 KNVDYVYYLVGMS--YAQ--------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
            N+DY Y++ GM+  YA          +     D    K     ++  + RY  S YV  
Sbjct: 102 TNIDYAYFMKGMTGYYADDGLFSDFLTLNLAKRDVTGAKKSFADLTEFLIRYPESDYVDE 161

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           AR  +   RN +A+ E++   YYLKRG YVAA+ R   ++ N  +    + A+  + EAY
Sbjct: 162 ARSRLVFLRNLIASNELDSAEYYLKRGAYVAALNRATYIIKNMPNTSEKKRALKIMKEAY 221

Query: 238 VALALMDEAREVVSL 252
             L   D A +V +L
Sbjct: 222 TKLGYKDYADKVKAL 236


>gi|146306003|ref|YP_001186468.1| DNA uptake lipoprotein-like protein [Pseudomonas mendocina ymp]
 gi|145574204|gb|ABP83736.1| DNA uptake lipoprotein-like protein [Pseudomonas mendocina ymp]
          Length = 330

 Score = 84.3 bits (207), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 102/210 (48%), Gaps = 10/210 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y +A   L  +++++A          +PF   A ++ L   +  Y   + + A S  E
Sbjct: 33  ELYRQAQADLDNRSYTQAIAKLKALESRYPFGRYAEQAQLELIYAYYKNVEPEAAKSSAE 92

Query: 119 EYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR-----ATKLMLQYMSRIVER 168
            +I  +P+  NVDY YYL G+ S+ Q    + R +P D       A +      +++  R
Sbjct: 93  RFIRLHPQHANVDYAYYLKGLASFDQDRGLLARFLPLDMTKRDPGAARDSYNEFAQLTSR 152

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y  S Y   A+  +   RN LAA EV +G YYLKR  YVAA  R + V+ N+ +     +
Sbjct: 153 YPTSRYAPDAKQRMIYLRNLLAAYEVHVGHYYLKRQAYVAAANRGRYVVENFQETPAVGD 212

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYP 258
            +A + EAY  LAL D A   +  ++  YP
Sbjct: 213 GLAIMTEAYQRLALNDLAATSLETLKLNYP 242


>gi|220918604|ref|YP_002493908.1| outer membrane assembly lipoprotein YfiO [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219956458|gb|ACL66842.1| outer membrane assembly lipoprotein YfiO [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 262

 Score = 84.3 bits (207), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 104/211 (49%), Gaps = 14/211 (6%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E Y+  +  LK  NF++A ++F      +PF+  A  S L  A V++   +Y +AA   +
Sbjct: 39  ENYQAGMDELKADNFTEAVKFFEFVKTKYPFSKFAALSELRLADVKFKQDRYLEAAEAYK 98

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVP-----------YDQRATKLMLQYMSRIVE 167
           +++  +P  ++VDY  Y  G++Y    +D P            DQR  +  +Q ++  V+
Sbjct: 99  QFVQLHPTHEDVDYAEYRSGLAY---FKDAPGDFALFPPASEKDQRQAEKAVQVLTDFVQ 155

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
             T S Y+  A+  +   + +LAA+E  +  YY KR  +  A  R++ ++  Y  + H  
Sbjct: 156 TRTQSKYLADAKKVLAEAQTRLAAREWYVAEYYYKRSRWAGAAGRYETLVDKYPGSTHEP 215

Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYP 258
           EA+ +L  A + +     AR+ +  +  ++P
Sbjct: 216 EALWKLASACLKMDEKHRARKALQTLIVKHP 246


>gi|149926151|ref|ZP_01914413.1| probable transmembrane protein [Limnobacter sp. MED105]
 gi|149824969|gb|EDM84181.1| probable transmembrane protein [Limnobacter sp. MED105]
          Length = 282

 Score = 84.3 bits (207), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 103/216 (47%), Gaps = 15/216 (6%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +YE+A   +   N+ +  E   +    +P+   A+++ + +AF  Y AG   QA +  + 
Sbjct: 49  LYEEAKAEIDVGNYERGIELLEKLEARYPYGRFAQQAQIDTAFAYYKAGDNAQALAATDR 108

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERY 169
           +I  YP  +N+DYVYYL G+      + +            D + T+        +V R+
Sbjct: 109 FIKLYPNHQNLDYVYYLRGLISFNEDKGIFSLLSGEDQSARDPKGTRAAFDAFKEVVSRF 168

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
            +S Y + ++  +    N LA  E+ + RYY KRG Y+AA+ R Q V+  +      EEA
Sbjct: 169 PDSKYYEDSKSRLQYLVNALAQNELHVARYYYKRGAYLAAVNRAQEVVRRFEQTPSIEEA 228

Query: 230 MARLVEAYVAL---ALMDEAREVVSLIQERYPQGYW 262
           +   + +Y  L   AL  + + V++L  +  P  YW
Sbjct: 229 LFISLRSYEKLNMTALAADTKRVINLNFKDSP--YW 262


>gi|261494333|ref|ZP_05990827.1| DNA uptake lipoprotein ComL [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|261309982|gb|EEY11191.1| DNA uptake lipoprotein ComL [Mannheimia haemolytica serotype A2
           str. OVINE]
          Length = 259

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 123/247 (49%), Gaps = 18/247 (7%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           KF       +A  F+ G    S++++   +V D+      Y K   +L++ +++ A  Y 
Sbjct: 3   KFKSLATLVLAGLFVAGCSN-SNKELEQSNVQDL------YGKGQTYLQDGDYNSAIRYL 55

Query: 81  NQC-SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
               ++   ++G+  ++ L   + QY  G+Y +A    E +   YP + N+DYV+YL G+
Sbjct: 56  EAVGTKGGQYSGLGEQTQLSLIYAQYKVGEYYKALDAAERFARSYPNAANMDYVFYLAGL 115

Query: 140 SYAQM----IRDVPYDQRATKLMLQYMS------RIVERYTNSPYVKGARFYVTVGRNQL 189
           S A++    I+D     RA++ +    +       IV+RY  S Y + A+ ++    N+L
Sbjct: 116 SNARLSDNFIQDFFGVNRASRAVDNVRNAYGNFQTIVQRYPQSQYAQDAQNWMNYLFNRL 175

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           A  E+ + ++Y +R  YVA + R + +L  Y +    ++A+  L EAY  + + D  ++ 
Sbjct: 176 AEHELAVVKFYDERNAYVAVVNRIEEMLRFYPNTLATKQALPYLKEAYKQMNIPDAEQKT 235

Query: 250 VSLIQER 256
             LIQE 
Sbjct: 236 ELLIQEN 242


>gi|254361950|ref|ZP_04978081.1| DNA uptake lipoprotein ComL [Mannheimia haemolytica PHL213]
 gi|153093497|gb|EDN74477.1| DNA uptake lipoprotein ComL [Mannheimia haemolytica PHL213]
          Length = 259

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 123/246 (50%), Gaps = 18/246 (7%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           KF       +A  F+ G    S++++   +V D+      Y K   +L++ +++ A  Y 
Sbjct: 3   KFKSLATLVLAGLFVAGCSN-SNKELEQSNVQDL------YGKGQTYLQDGDYNSAIRYL 55

Query: 81  NQC-SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
               ++   ++G+  ++ L   + QY  G+Y +A    E +   YP + N+DYV+YL G+
Sbjct: 56  EAVGTKGGQYSGLGEQTQLSLIYAQYKVGEYYKALDAAERFARSYPNAANMDYVFYLAGL 115

Query: 140 SYAQM----IRDVPYDQRATKLMLQYMS------RIVERYTNSPYVKGARFYVTVGRNQL 189
           S A++    I+D     RA++ +    +       IV+RY  S Y + A+ ++    N+L
Sbjct: 116 SNARLSDNFIQDFFGVNRASRAVDNVRNAYGNFQTIVQRYPQSQYAQDAQNWMNYLFNRL 175

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           A  E+ + ++Y +R  YVA + R + +L  Y +    ++A+  L EAY  + + D  ++ 
Sbjct: 176 AEHELAVVKFYDERNAYVAVVNRIEEMLRFYPNTLATKQALPYLKEAYKQMNIPDAEQKT 235

Query: 250 VSLIQE 255
             LIQE
Sbjct: 236 ELLIQE 241


>gi|197123839|ref|YP_002135790.1| outer membrane assembly lipoprotein YfiO [Anaeromyxobacter sp. K]
 gi|196173688|gb|ACG74661.1| outer membrane assembly lipoprotein YfiO [Anaeromyxobacter sp. K]
          Length = 262

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 104/211 (49%), Gaps = 14/211 (6%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E Y+  +  LK  NF++A ++F      +PF+  A  S L  A V++   +Y +AA   +
Sbjct: 39  ENYQAGMDELKADNFTEAVKFFEFVKTKYPFSKFAALSELRLADVKFKQDRYLEAAEAYK 98

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVP-----------YDQRATKLMLQYMSRIVE 167
           +++  +P  ++VDY  Y  G++Y    +D P            DQR  +  +Q ++  V+
Sbjct: 99  QFVQLHPTHEDVDYAEYRSGLAY---FKDAPGDFALFPPASEKDQRQAEKAVQVLTDFVQ 155

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
             T S Y+  A+  +   + +LAA+E  +  YY KR  +  A  R++ ++  Y  + H  
Sbjct: 156 TRTQSKYLADAKKVLAEAQTRLAAREWYVAEYYYKRSRWAGAAGRYETLVDKYPGSAHEP 215

Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYP 258
           EA+ +L  A + +     AR+ +  +  ++P
Sbjct: 216 EALWKLASACLKMDEKHRARKALQTLIVKHP 246


>gi|309782613|ref|ZP_07677335.1| competence lipoprotein ComL [Ralstonia sp. 5_7_47FAA]
 gi|308918588|gb|EFP64263.1| competence lipoprotein ComL [Ralstonia sp. 5_7_47FAA]
          Length = 258

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 106/212 (50%), Gaps = 10/212 (4%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            ++Y +A   L   +++KA +Y+ +    +PF   A+++ + +A+  Y  G+   A +  
Sbjct: 28  NKLYSEAKDSLDGGDYAKAVKYYEKLESRYPFGQYAQQAQIETAYANYKDGETAAALAAV 87

Query: 118 EEYITQYPESKNVDYVYYLVGM-SYAQMI--------RDVP-YDQRATKLMLQYMSRIVE 167
           + +I  +P   +VDY YYL G+ ++   +        +D+   D +A +        +  
Sbjct: 88  DRFIQLHPNHPSVDYAYYLNGLINFNDNLGWLGRFSNQDLSERDPKAARAAYDAFKTLFT 147

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
           R+ NS Y   A   +    N +A  EV   RYY +RG Y+AA+ R Q  + +Y  A   E
Sbjct: 148 RFPNSKYTPDATQRMQYIVNAMAEHEVGAARYYYRRGAYLAAVNRAQDAIKDYDRAPAVE 207

Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           EA+  ++++Y AL + D   +   +I++ YP+
Sbjct: 208 EALYIMMKSYEALGMKDMRDDTERIIKQNYPK 239


>gi|261493666|ref|ZP_05990185.1| DNA uptake lipoprotein ComL [Mannheimia haemolytica serotype A2
           str. BOVINE]
 gi|261310666|gb|EEY11850.1| DNA uptake lipoprotein ComL [Mannheimia haemolytica serotype A2
           str. BOVINE]
          Length = 259

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 123/246 (50%), Gaps = 18/246 (7%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           KF       +A  F+ G    S++++   +V D+      Y K   +L++ +++ A  Y 
Sbjct: 3   KFKSLATLVLAGLFVAGCSN-SNKELEQSNVQDL------YGKGQTYLQDGDYNSAIRYL 55

Query: 81  NQC-SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
               ++   ++G+  ++ L   + QY  G+Y +A    E +   YP + N+DYV+YL G+
Sbjct: 56  EAVGTKGGQYSGLGEQTQLSLIYAQYKVGEYYKALDAAERFARSYPNAANMDYVFYLAGL 115

Query: 140 SYAQM----IRDVPYDQRATKLMLQYMS------RIVERYTNSPYVKGARFYVTVGRNQL 189
           S A++    I+D     RA++ +    +       IV+RY  S Y + A+ ++    N+L
Sbjct: 116 SNARLSDNFIQDFFGVNRASRAVDNVRNAYGNFQTIVQRYPQSQYAQDAQNWMNYLFNRL 175

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           A  E+ + ++Y +R  YVA + R + +L  Y +    ++A+  L EAY  + + D  ++ 
Sbjct: 176 AEHELAVVKFYDERNAYVAVVNRIEEMLRFYPNTLATKQALPYLKEAYKQMNIPDAEQKT 235

Query: 250 VSLIQE 255
             LIQE
Sbjct: 236 ELLIQE 241


>gi|222111092|ref|YP_002553356.1| outer membrane assembly lipoprotein yfio [Acidovorax ebreus TPSY]
 gi|221730536|gb|ACM33356.1| outer membrane assembly lipoprotein YfiO [Acidovorax ebreus TPSY]
          Length = 265

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 97/211 (45%), Gaps = 10/211 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L   ++ KA     +         +A+++ L  A+ QY  G+  QA +  +
Sbjct: 36  KIYSEARDELNGGSYDKAVPLLEKLEGRAAGTPLAQQAQLEKAYAQYKGGEKAQAIATLD 95

Query: 119 EYITQYPESKNVDYVYYLVGM----------SYAQMIRDVPYDQRATKLMLQYMSRIVER 168
            ++  +P S   DY  YL G+          S+         DQ+A K   +    +V R
Sbjct: 96  RFMKLHPASPAYDYALYLKGLVNFNDNLGLFSWLSRQDLSERDQKAAKDSFESFRELVTR 155

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           +  S Y   AR  +T   N LA  EV + RYY +RG YVAA+ R Q  +A+Y D    EE
Sbjct: 156 FPESRYTPDARQRMTYIVNSLAQYEVHVARYYYERGAYVAAVSRAQSAVADYKDVPATEE 215

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           A+  LV +Y AL L     +   ++   YPQ
Sbjct: 216 ALYILVRSYDALGLTQLRDDTRRVMDASYPQ 246


>gi|170718792|ref|YP_001783974.1| hypothetical protein HSM_0636 [Haemophilus somnus 2336]
 gi|168826921|gb|ACA32292.1| Tetratricopeptide TPR_2 repeat protein [Haemophilus somnus 2336]
          Length = 262

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 10/207 (4%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           + +YEK   +L++ ++S+A  Y +   + FP +    +  L   +  Y +  Y  A    
Sbjct: 33  QTLYEKGHSYLQDADYSQAIRYLDTAKKRFPGSQYNEQVQLDLIYAYYKSQDYTNALVTI 92

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQM----IRDVPYDQRAT------KLMLQYMSRIVE 167
           + +I QYP+S ++DYV Y+ G+S + +     +D+    RAT      K        +V+
Sbjct: 93  DRFIQQYPQSSHLDYVIYIAGLSNSALGDNWFQDLFGVDRATRESTSIKTAFANFQTLVQ 152

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            + NSPY   A   +   R  LA  E+EI ++Y KR  +VA   R   +L  Y D +   
Sbjct: 153 HFPNSPYASDALARMAYIRASLARHELEIAKFYAKRNAHVAVANRVVGMLQQYPDTKATL 212

Query: 228 EAMARLVEAYVALALMDEAREVVSLIQ 254
           +A+  +  AY  + L   A++  SLIQ
Sbjct: 213 DALPLMKNAYEKMGLTKLAQQADSLIQ 239


>gi|167950144|ref|ZP_02537218.1| competence lipoprotein ComL [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 271

 Score = 83.6 bits (205), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 10/213 (4%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +A   + + ++  A EY+      +PF   A ++ L   +  Y   +   A +  E +
Sbjct: 38  YSEAKSAMMDGDYDGAIEYYEGLEARYPFGRYATQAQLDIIYAHYKNSEPDSAIAAAERF 97

Query: 121 ITQYPESKNVDYVYYLVGM-----SYAQMIRDVPYD--QRATKLMLQYMS---RIVERYT 170
           I  +P++  VDY YYL G+     +++   R +P D  QR     L   S    +V R+ 
Sbjct: 98  IRLHPQNSYVDYAYYLKGLANFNRNHSITTRFIPIDSSQRDAGAALTSFSDFAELVRRFP 157

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            S Y   AR  +   RN LA  ++ + RYY++RG Y+AA  R   V+AN+      +EA+
Sbjct: 158 ESKYASDARQRMIYLRNNLAKYQIHVARYYMRRGAYLAAANRANRVVANFQRTSVVDEAL 217

Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
             +V+AY  L L + A +   ++      G +A
Sbjct: 218 QIMVDAYTRLGLKNLAADAERVLALNRQNGLFA 250


>gi|299066638|emb|CBJ37831.1| putative lipoprotein, ComL family, tetratricopeptide repeats (TPR)
           domain [Ralstonia solanacearum CMR15]
          Length = 244

 Score = 83.6 bits (205), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 105/211 (49%), Gaps = 10/211 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L   ++SKA +Y+ +    +PF   A+++ + +A+  Y  G+   A +  +
Sbjct: 15  KLYSEAKDALDGGDYSKAVKYYEKLESRYPFGPFAQQAQIETAYANYKDGETAAALAAVD 74

Query: 119 EYITQYPESKNVDYVYYLVGM-SYAQMI--------RDVP-YDQRATKLMLQYMSRIVER 168
            +I  +P   +VDY YYL G+ ++   +        +D+   D +A +        ++ R
Sbjct: 75  RFIQLHPNHPSVDYAYYLKGLINFNDNLGWLGRFSNQDLSERDPKAARAAYDAFKTLLAR 134

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           + NS Y   A   +    N +A  EV+  RYY +RG Y+AA  R Q  + +Y  A   EE
Sbjct: 135 FPNSKYAPDAAQRMQYIVNAMAEHEVQAARYYYRRGAYLAATNRAQEAIKDYDRAPAVEE 194

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            +  ++++Y AL + D   +   +I++ YP 
Sbjct: 195 GLYIMMKSYEALGMKDLRDDTERIIKQNYPN 225


>gi|118594977|ref|ZP_01552324.1| putative competence lipoprotein precursor [Methylophilales
           bacterium HTCC2181]
 gi|118440755|gb|EAV47382.1| putative competence lipoprotein precursor [Methylophilales
           bacterium HTCC2181]
          Length = 272

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 109/215 (50%), Gaps = 11/215 (5%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           R   E+   A +F   +++ +  E+  +  + FP + +A +  L  A+   +  + ++A 
Sbjct: 36  RTDAEIVRGAEVFSANKDWQRTIEWLEKAEKRFPNSPLAPQIKLNLAYAYKNFYRDEEAL 95

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSY--------AQMIRDVPYDQRATKL--MLQYMSR 164
           ++ +++I  YP    +DY YYL G+             ++D+  D+  ++L    + + +
Sbjct: 96  AMLDKFIRTYPNHPALDYAYYLKGVVLFVDRGIVEELTLQDIS-DRDVSQLEGAFKALKQ 154

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V  +  S Y + A   +T   N+++ +E+ + RYY++R  YV A+ R + VL NYS + 
Sbjct: 155 MVRLFPESEYAEDATNRMTYLMNKISERELHVARYYMRREAYVGALNRAKFVLENYSQSI 214

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           H EEA+  +V AY  L + D A +   ++   +P 
Sbjct: 215 HQEEALVIMVSAYNKLGIFDLAEDTKRVLDLNFPD 249


>gi|91788478|ref|YP_549430.1| hypothetical protein Bpro_2616 [Polaromonas sp. JS666]
 gi|91697703|gb|ABE44532.1| putative transmembrane protein [Polaromonas sp. JS666]
          Length = 274

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 89/179 (49%), Gaps = 10/179 (5%)

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM----------SY 141
           +A+++ +  A+ QY  G+  QA +  + ++  +P S  +DY  YL G+          S+
Sbjct: 78  LAQQAQIEKAYAQYKGGEQPQAIATLDRFMKLHPASPAMDYALYLKGLVNFNDNLGLFSF 137

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
                    DQ+A K   +    +V R+ +S Y   AR  +    N LA  EV + RYY 
Sbjct: 138 ISRQDLSERDQKAAKESFESFRDLVNRFPDSRYTPDARLRMAYIVNSLAQSEVHVARYYY 197

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            RG YVAAI R Q  +A Y D    EEA   L ++Y AL +++   ++  ++++ YPQ 
Sbjct: 198 SRGAYVAAINRAQAAIAEYRDVPALEEATYILYKSYDALGMVELRDDMRRIMEKSYPQS 256


>gi|113460512|ref|YP_718576.1| DNA uptake lipoprotein [Haemophilus somnus 129PT]
 gi|112822555|gb|ABI24644.1| DNA uptake lipoprotein [Haemophilus somnus 129PT]
          Length = 262

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 10/207 (4%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           + +YEK   +L++ ++S+A  Y +   + FP +    +  L   +  Y +  Y  A    
Sbjct: 33  QTLYEKGHSYLQDADYSQAIRYLDTAKKRFPGSQYNEQVQLDLIYAYYKSQDYTNALVTI 92

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQM----IRDVPYDQRAT------KLMLQYMSRIVE 167
           + +I QYP+S ++DYV Y+ G+S + +     +D+    RAT      K        +V+
Sbjct: 93  DRFIQQYPQSSHLDYVIYIAGLSNSALGDNWFQDLFGVDRATRESTSIKTAFANFQTLVQ 152

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            + NSPY   A   +   R  LA  E+EI ++Y KR  +VA   R   +L  Y D +   
Sbjct: 153 HFPNSPYAADALARMAYIRASLARHELEIAKFYAKRNAHVAVANRVVGMLQQYPDTKATL 212

Query: 228 EAMARLVEAYVALALMDEAREVVSLIQ 254
           +A+  +  AY  + L   A++  SLIQ
Sbjct: 213 DALPLMKNAYEKMGLTKLAQQADSLIQ 239


>gi|71907235|ref|YP_284822.1| putative competence lipoprotein precursor [Dechloromonas aromatica
           RCB]
 gi|71846856|gb|AAZ46352.1| putative competence lipoprotein precursor [Dechloromonas aromatica
           RCB]
          Length = 257

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 10/200 (5%)

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
           + N+ KA +Y  +    FP+   A+++ L   +V +   +   A +  + +I  +P    
Sbjct: 40  DGNWEKAAKYLEKLEARFPYGRYAQQAQLELGYVYWKGNEPGSALAACDRFIKLHPSHPT 99

Query: 130 VDYVYYLVGM----------SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           VDYVYYL G+          +Y         D +A +        +V R+  S Y   A 
Sbjct: 100 VDYVYYLKGLINFNEDLGLTAYISSQDPTERDPKAAREAFDAFKELVTRFPESKYAPDAS 159

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             +    N LA+ EV + RYY+KRG Y+AA  R Q  +  Y  A   EEAM  LV +Y  
Sbjct: 160 LRMNYLVNALASLEVHVARYYVKRGAYIAAANRAQFAVKTYPQAPAIEEAMFILVTSYDK 219

Query: 240 LALMDEAREVVSLIQERYPQ 259
           + + +   +   ++++ +P 
Sbjct: 220 MGMNELRDDAQRVMKKNFPN 239


>gi|145589103|ref|YP_001155700.1| putative transmembrane protein [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145047509|gb|ABP34136.1| putative transmembrane protein [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 295

 Score = 83.2 bits (204), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 115/250 (46%), Gaps = 18/250 (7%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
           FAL +    A+  L G      +       TD+  + ++Y +A   + + +F+K  +YF 
Sbjct: 30  FALLLAIIFALILLGGCAGSEGKK----DDTDIWPEAKLYSEATDKMNDADFAKCGKYFE 85

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
           +    FPF   ++++ + SA+  + A +  QA    + +I  +  S  +DY YYL G+  
Sbjct: 86  KLEARFPFGPYSQQAQINSAYCYWKAQEQAQALIAIDRFIKLHQGSPTLDYAYYLKGL-- 143

Query: 142 AQMIRDVPY------------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
                D+ +            D +A K   +    +V+R+ +S Y   +   +    N L
Sbjct: 144 ITFNDDLGWLGNFTGQDLSERDPKAAKEAFESFKTVVDRFPDSKYAPDSLDRMRYIVNSL 203

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           A  +V + R+Y +RG Y+A+  R QLV+ +Y  A   EEA+  LV++Y  L L   + + 
Sbjct: 204 AEADVNVARFYYQRGAYLASANRAQLVIRDYDRAPAVEEALYILVKSYEKLGLTQLSNDS 263

Query: 250 VSLIQERYPQ 259
             +    +P 
Sbjct: 264 ARVFALNFPD 273


>gi|330501970|ref|YP_004378839.1| DNA uptake lipoprotein-like protein [Pseudomonas mendocina NK-01]
 gi|328916256|gb|AEB57087.1| DNA uptake lipoprotein-like protein [Pseudomonas mendocina NK-01]
          Length = 330

 Score = 83.2 bits (204), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 10/210 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y++A   L  +++++A          +PF   A ++ L   +  Y   + + A S  E
Sbjct: 33  ELYQQAQADLDNRSYTQAIAKLKALESRYPFGRYAEQAQLELIYAYYKNAEPEAAKSSAE 92

Query: 119 EYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR-----ATKLMLQYMSRIVER 168
            +I  +P+  NVDY YYL G+ S+ Q    + R +P D       A +      +++  R
Sbjct: 93  RFIRLHPQHANVDYAYYLKGLASFDQDRGLLARFLPLDMTKRDPGAARDSYNEFAQLTSR 152

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y  S Y   A+  +   RN LAA E+ +G YYL R  YVAA  R + V+ N+ +     +
Sbjct: 153 YPTSRYAPDAKQRMIYLRNLLAAYEIHVGHYYLTRQAYVAAANRGRYVVENFQETPSVGD 212

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYP 258
            +A + EAY  L+L D A   +  ++  YP
Sbjct: 213 GLAIMTEAYQRLSLDDLAATSLETLKLNYP 242


>gi|241760147|ref|ZP_04758245.1| competence lipoprotein ComL [Neisseria flavescens SK114]
 gi|241319601|gb|EER56031.1| competence lipoprotein ComL [Neisseria flavescens SK114]
          Length = 267

 Score = 83.2 bits (204), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 10/212 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L   N+++A + +      FP    A++S L +A+  Y   + ++A +   
Sbjct: 37  KLYAEAQDELNSNNYTRAVKLYEILESRFPNGRYAQQSQLDTAYAYYKDDEPEKALAAIA 96

Query: 119 EYITQYPESKNVDYVYYLVGM-------SYAQMIRDVPY---DQRATKLMLQYMSRIVER 168
            +   +P+  N+DY  YL G+       S+   +    +   D +A +   Q  + +V+R
Sbjct: 97  RFQRHHPQHPNMDYALYLKGLVLFNEDQSFLNKLASQDWSDRDPKANRDAYQAFAELVQR 156

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS Y   A   +    + L   E+ + RYY+KRG YVAA+ R Q ++A Y +  + EE
Sbjct: 157 YPNSKYAADATERMAKLVDALGGNEMSVARYYMKRGAYVAAVNRAQKIVARYQNTRYVEE 216

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           A+A +  AY  L     A +   +++  +PQ 
Sbjct: 217 ALAMMELAYKKLDKPQLAADTRRVLETNFPQS 248


>gi|121594196|ref|YP_986092.1| hypothetical protein Ajs_1829 [Acidovorax sp. JS42]
 gi|120606276|gb|ABM42016.1| putative transmembrane protein [Acidovorax sp. JS42]
          Length = 300

 Score = 83.2 bits (204), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 97/211 (45%), Gaps = 10/211 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L   ++ KA     +         +A+++ L  A+ QY  G+  QA +  +
Sbjct: 71  KIYSEARDELNGGSYDKAVPLLEKLEGRAAGTPLAQQAQLEKAYAQYKGGEKAQAIATLD 130

Query: 119 EYITQYPESKNVDYVYYLVGM----------SYAQMIRDVPYDQRATKLMLQYMSRIVER 168
            ++  +P S   DY  YL G+          S+         DQ+A K   +    +V R
Sbjct: 131 RFMKLHPASPAYDYALYLKGLVNFNDNLGLFSWLSRQDLSERDQKAAKDSFESFRELVTR 190

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           +  S Y   AR  +T   N LA  EV + RYY +RG YVAA+ R Q  +A+Y D    EE
Sbjct: 191 FPESRYTPDARQRMTYIVNSLAQYEVHVARYYYERGAYVAAVSRAQSAVADYKDVPATEE 250

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           A+  LV +Y AL L     +   ++   YPQ
Sbjct: 251 ALYILVRSYDALGLTQLRDDTRRVMDASYPQ 281


>gi|226943323|ref|YP_002798396.1| competence protein ComL [Azotobacter vinelandii DJ]
 gi|226718250|gb|ACO77421.1| competence protein ComL [Azotobacter vinelandii DJ]
          Length = 337

 Score = 83.2 bits (204), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 10/210 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y++A   L  +NF  A          +PF   A ++ L   +  Y + +   + S  E
Sbjct: 36  ELYQQAQNDLNNENFGSATTKLKALESRYPFGRYAEQAQLELIYAYYKSQETDASRSAAE 95

Query: 119 EYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR-----ATKLMLQYMSRIVER 168
            +I  +P+  NVDY YYL G+ S+ Q    + R +P D       A +      +++  R
Sbjct: 96  RFIRLHPQHPNVDYAYYLKGLASFDQDRGLLSRFLPLDMTKRDPGAARDSFNEFAQLTSR 155

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           + NS Y   A+  +   RN LAA E+ +  YYLKR  YVAA  R + V+ N  +     +
Sbjct: 156 FPNSRYAPDAKARMVYLRNLLAAYEIHVAHYYLKREAYVAAANRGRYVVENLQETPAVGD 215

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYP 258
            +A ++EAY  + L + A   +  ++  YP
Sbjct: 216 GLAVMIEAYQRMTLDELATTSLETLKLNYP 245


>gi|254426918|ref|ZP_05040625.1| outer membrane assembly lipoprotein YfiO [Alcanivorax sp. DG881]
 gi|196193087|gb|EDX88046.1| outer membrane assembly lipoprotein YfiO [Alcanivorax sp. DG881]
          Length = 272

 Score = 83.2 bits (204), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 10/210 (4%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +A   ++ +N+  A +   +    FP+   A +S L   + QY +  Y       + +
Sbjct: 33  YREASESIESKNYLTAIDQLKELEARFPYGDYAEQSALDLIYAQYKSVDYPATVVAAQRF 92

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYT 170
           +  YP    +DY  Y+ G++   M + +            D  A K   +   R+V R+ 
Sbjct: 93  MRNYPAHPRMDYALYMRGLANFNMEKGLFDNMVTSDRSSKDMDAAKDAFRDFERLVARFP 152

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
           +S Y   AR  +   RNQLA +E+ + RYY +RG  VA+I R Q V+ +Y      EE +
Sbjct: 153 DSEYSPDARARMVHIRNQLARQELHVARYYARRGAIVASINRAQYVVKHYQQTPAVEEGL 212

Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQG 260
           A + + Y  L L ++A +  +++   +P  
Sbjct: 213 AIMTKGYQRLELPEQAEKSRAVLALNWPDS 242


>gi|224825455|ref|ZP_03698560.1| outer membrane assembly lipoprotein YfiO [Lutiella nitroferrum
           2002]
 gi|224602376|gb|EEG08554.1| outer membrane assembly lipoprotein YfiO [Lutiella nitroferrum
           2002]
          Length = 256

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 20/216 (9%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L   N+++A + +      FP+   A++S +  A+  Y   + + A +  +
Sbjct: 26  KLYAEARDELNSGNYTRAVKLYETLEARFPYGRYAQQSEMDLAYTHYKDNEPELAIAAAD 85

Query: 119 EYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSRIV 166
            +I  +P   N+DYV YL G+ Y             Q + +   D RAT+        + 
Sbjct: 86  RFIKLHPTHPNLDYVLYLKGLVYYNDDSGLLAKWAGQDMSER--DPRATREAFLAFRELT 143

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
            R+ NS Y   A   +      L   E+ + RYY+KRG Y+AA  R Q V+  Y++  + 
Sbjct: 144 SRFPNSQYSADAAEKMNKLIKALGGHEMHVARYYMKRGAYLAAAGRAQNVVKEYANTGYL 203

Query: 227 EEAMARLVEAYVALA---LMDEAREVVSLIQERYPQ 259
           EEA+A  V AY  L    L D+AR V+ L    YP+
Sbjct: 204 EEALALTVTAYDKLGMPQLRDDARRVLEL---NYPK 236


>gi|258545096|ref|ZP_05705330.1| competence lipoprotein ComL [Cardiobacterium hominis ATCC 15826]
 gi|258519673|gb|EEV88532.1| competence lipoprotein ComL [Cardiobacterium hominis ATCC 15826]
          Length = 287

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 91/193 (47%), Gaps = 10/193 (5%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y+ A   + +  +  A +Y+ +    +PF  VA+++ L  A+  Y  G+ ++A S  E
Sbjct: 46  KLYQTAKTEMNDGAYGSASKYYTKLLARYPFGRVAQQATLDLAYAYYRDGETEKAQSEIE 105

Query: 119 EYITQYPESKNVDYVYYLVGM----------SYAQMIRDVPYDQRATKLMLQYMSRIVER 168
            +I  YP+   +DY YY+ G+               I     D +  K    +   +V R
Sbjct: 106 NFIRTYPQHPYIDYAYYMRGVFAYEKDVSIFDRLNPINMAQTDPQPLKQAFNHFDELVRR 165

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           +  S Y + ARF +   +N L   E+EI  YY+++G Y+AAI R + VL  Y        
Sbjct: 166 FPQSEYAEDARFRMLFIKNLLGQHELEIADYYMRKGAYIAAINRAKGVLEQYEQTPSTPY 225

Query: 229 AMARLVEAYVALA 241
           A+A +  AY  L 
Sbjct: 226 ALALMTRAYRELG 238


>gi|302879314|ref|YP_003847878.1| outer membrane assembly lipoprotein YfiO [Gallionella
           capsiferriformans ES-2]
 gi|302582103|gb|ADL56114.1| outer membrane assembly lipoprotein YfiO [Gallionella
           capsiferriformans ES-2]
          Length = 264

 Score = 82.8 bits (203), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 102/204 (50%), Gaps = 13/204 (6%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y +A   L + +++ A + +      +P+   A++S+L  A+  Y   +   A +  +
Sbjct: 38  ELYRQAKTELDDGSYNTAIKLYETLQSRYPYGKYAQQSMLEMAYAYYRQSEPDPAIATAD 97

Query: 119 EYITQYPESKNVDYVYYLVGMS--------YAQMIRDVPY--DQRATKLMLQYMSRIVER 168
            +I Q+P + +VDY YY+ G++         + +    P   D +A          +V R
Sbjct: 98  RFIKQFPNNAHVDYAYYVKGLATFNGELSLLSSVAGQDPSERDPQAALESFNAFKALVVR 157

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           + NS Y   A+  +    N L+  E+ + +YYL+RG Y+AA+ R Q ++  Y ++    E
Sbjct: 158 FPNSKYTPDAKLRLQYLVNALSRHEIHVAQYYLRRGAYIAAVNRAQDIIKQYPNSPSTRE 217

Query: 229 AMARLVEAYVALALM---DEAREV 249
           A+  +++AY AL ++   D+ + V
Sbjct: 218 ALQIMIDAYDALGMVQLRDDTKRV 241


>gi|109897659|ref|YP_660914.1| putative lipoprotein [Pseudoalteromonas atlantica T6c]
 gi|109699940|gb|ABG39860.1| putative lipoprotein [Pseudoalteromonas atlantica T6c]
          Length = 255

 Score = 82.8 bits (203), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 114/247 (46%), Gaps = 13/247 (5%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           IF + A+  L G       +   + V + R  + +YE A   +   NF+ A    +    
Sbjct: 10  IFLAAAIIALGGCSSSPDEE---EVVVNNRSAQSLYEDAKEKMAIGNFNAATATLSALDS 66

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
            +PF  ++ +  L   +  Y +GK  +A S  + +    P   +VDY  Y+ G++  +  
Sbjct: 67  RYPFGPLSNQVQLDLIYAYYKSGKVNEAISTIDRFTRLNPNHADVDYAIYMRGLTNMESD 126

Query: 146 RDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           +++            D   ++   +   R++++Y +S Y   A+  +   +++LA  E+ 
Sbjct: 127 KNLFQELVGIDRSDRDPSKSREAFEDFRRLIDKYPDSKYAADAQKRMLHIKSRLAKYEIA 186

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           I R+Y++R  +VAA  R + VL  Y D +H +EA+  +VE Y  L L +    V+  ++ 
Sbjct: 187 IARFYMRREAFVAAANRGRYVLEYYPDTDHVQEALEIMVECYDQLKLDELKNNVMKTLKL 246

Query: 256 RYPQGYW 262
            YP   +
Sbjct: 247 NYPDSSF 253


>gi|89093552|ref|ZP_01166500.1| competence lipoprotein ComL, putative [Oceanospirillum sp. MED92]
 gi|89082242|gb|EAR61466.1| competence lipoprotein ComL, putative [Oceanospirillum sp. MED92]
          Length = 307

 Score = 82.4 bits (202), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 104/213 (48%), Gaps = 10/213 (4%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           ++++Y++A+  ++E N+  A E        +PF   + ++ L   +  +   + + A + 
Sbjct: 33  EQQLYQEAMKAMEEVNYDLAIEKLQLLEARYPFGRFSEQTQLELIYAYFKNYEPEAARAA 92

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIV 166
            + +I  +P   N+DY YYL G++  +           I +   D  A     +  S +V
Sbjct: 93  ADRFIRLHPNHDNIDYAYYLKGLTAFEQDISWITQYLPIDETQRDPGAALDSFESFSTLV 152

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
            RY  S Y   +   +   +N+LAA EV + RYY++R  +VAA  R + V+ N  +    
Sbjct: 153 NRYPESQYAPDSYKRMVYLKNRLAAYEVHVARYYIQREAFVAAANRGRYVIENMQETPAV 212

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            +A+A ++EAY  L   D A +  S++ + YP+
Sbjct: 213 PDALAVMIEAYTHLGQQDLAADTQSVLSQNYPE 245


>gi|254499158|ref|ZP_05111842.1| hypothetical protein LDG_3116 [Legionella drancourtii LLAP12]
 gi|254351619|gb|EET10470.1| hypothetical protein LDG_3116 [Legionella drancourtii LLAP12]
          Length = 259

 Score = 82.4 bits (202), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 89/181 (49%), Gaps = 10/181 (5%)

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
           +PF+     S +   +  Y    Y  AA+  E +I  YP +KNVDY YY+ G++  Q  R
Sbjct: 68  YPFSDYTESSQMDLIYAYYKNEDYPSAAATAERFIHLYPRAKNVDYAYYMRGLANFQQTR 127

Query: 147 DV-----PYDQ--RATKLMLQYMSR---IVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
            V     P D+  R      Q  S    +++++  S Y   A   +   RN  A +E+ +
Sbjct: 128 GVFAKVLPLDESWRDPGTQTQAYSDFAVLIQKFPESKYKANALQRMIYLRNMFAQQELNV 187

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            ++Y KR  YVAAI R   ++ NY  A  A++A+  + ++ VAL L   A EV ++ Q  
Sbjct: 188 SKFYFKRKMYVAAIERASYLVKNYPQAPSAQQALVIMYKSNVALGLNKTAEEVKTVYQAT 247

Query: 257 Y 257
           Y
Sbjct: 248 Y 248


>gi|90022197|ref|YP_528024.1| Acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine
           O-acyltransferase [Saccharophagus degradans 2-40]
 gi|89951797|gb|ABD81812.1| competence lipoprotein ComL, putative [Saccharophagus degradans
           2-40]
          Length = 301

 Score = 82.4 bits (202), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 9/212 (4%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           ++++Y++A   L   ++  A EY       +PF   A +S L   F  Y + +++ A + 
Sbjct: 32  EKDIYQRAQYALNHSSWDAAVEYLQLLEEHYPFGVYAEQSQLELIFAYYQSDEHEAAIAS 91

Query: 117 GEEYITQYPESKNVDYVYYLVGMSY----AQMIRDVPYD--QR---ATKLMLQYMSRIVE 167
            + +I  +P+ ++VDY YY+ G++       +   +P D  QR     +    Y ++ + 
Sbjct: 92  ADRFIRLHPQHRSVDYAYYMRGVASFSNDTAITSFLPTDVTQRDIGTAREAFNYFNQFLN 151

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
           RY +SPY   A+  +   RN +A  E+ +  YY KR  Y+AA  R + V+ N        
Sbjct: 152 RYPDSPYALDAQKRMIYLRNTMARSEIHVANYYFKREAYLAAANRGRYVVENMQGTPAVP 211

Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           + +A +   Y  L + + A + V ++   YP 
Sbjct: 212 DGLAVMAMGYHMLNMPELANDAVKVLIANYPN 243


>gi|332307417|ref|YP_004435268.1| outer membrane assembly lipoprotein YfiO [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332174746|gb|AEE24000.1| outer membrane assembly lipoprotein YfiO [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 255

 Score = 82.4 bits (202), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 116/247 (46%), Gaps = 13/247 (5%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           +F + A+  L G    SS D   + V + R  + +YE A   +   NF+ A    +    
Sbjct: 10  VFLAAAIIALGGC--SSSLDEE-EVVVNNRSAQSLYEDAKEKMAIGNFNAATATLSALDS 66

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
            +PF  ++ +  L   +  Y +GK  +A S  + +    P   +VDY  Y+ G++  +  
Sbjct: 67  RYPFGPLSNQVQLDLIYAYYKSGKVNEAISTIDRFTRLNPNHADVDYAIYMRGLTNMESD 126

Query: 146 RDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           +++            D   ++   +   R++E++ +S Y   A+  +   +++LA  E+ 
Sbjct: 127 KNLFQELVGIDRSDRDPSKSREAFEDFRRLIEKFPDSKYAADAQKRMLHIKSRLAKYEIA 186

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           I R+Y++R  YVAA  R + VL  Y D +H +EA+  +VE Y  L L +    V+  ++ 
Sbjct: 187 IARFYMRREAYVAAANRGRYVLEYYPDTDHVQEALEIMVECYDQLKLDELKNNVMKTLKL 246

Query: 256 RYPQGYW 262
            YP   +
Sbjct: 247 NYPDSSF 253


>gi|70732612|ref|YP_262375.1| competence lipoprotein ComL [Pseudomonas fluorescens Pf-5]
 gi|68346911|gb|AAY94517.1| competence lipoprotein ComL [Pseudomonas fluorescens Pf-5]
          Length = 341

 Score = 82.4 bits (202), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 110/228 (48%), Gaps = 14/228 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           SS++V  +++++V    E+Y++A   L   +++ A          +PF   A ++ L   
Sbjct: 19  SSKEVVDENLSEV----ELYQQAQTDLDNHSYTSATAKLKALESRYPFGRYADQAQLELI 74

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR--- 153
           +  Y   + + A S  E +I  +P+  NVDY YYL G+ S+ Q    + R +P D     
Sbjct: 75  YANYKNAEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQDVGLLARFLPLDMTKRD 134

Query: 154 --ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
             A +      +++  R+ NS Y   A+  +   RN LAA E+ +  YYL R  YVAA  
Sbjct: 135 PGAARDSYNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLAAYEIHVADYYLTRQAYVAAAN 194

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           R + V+ N+ +     + +A + EAY  L L + A   +  ++  YP 
Sbjct: 195 RGRYVVENFQETPSVGDGLAVMTEAYQRLHLDELAATSLETLKLNYPN 242


>gi|82703096|ref|YP_412662.1| TPR repeat-containing protein [Nitrosospira multiformis ATCC 25196]
 gi|82411161|gb|ABB75270.1| TPR repeat [Nitrosospira multiformis ATCC 25196]
          Length = 266

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 14/213 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +A   L + N++ A + F      +P+   A+++ L   +  Y  G+   A +  + +
Sbjct: 35  YTEAKSELNDGNYAAAIKLFEALEARYPYGRYAQQAQLEIGYAHYKDGEQALAIAAADRF 94

Query: 121 ITQYPESKNVDYVYYLVGMSYAQ-------------MIRDVP-YDQRATKLMLQYMSRIV 166
           I  +P   NVDY YYL G++                + +D+   D +A+    +    +V
Sbjct: 95  IKLHPNHPNVDYAYYLKGLANFNDDLGLMGIVTEKILNQDMSERDPKASHESFENFKELV 154

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
            R+  S Y   A   +    N +A  E+++ RYY+KRG YVAA  R Q  L  Y      
Sbjct: 155 NRFPKSKYAPDAVQRMKHLVNVVALNEIQVARYYMKRGGYVAAANRAQYALKEYPQTPAT 214

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           EEA+  +V+AY AL + D   +   ++++ +P 
Sbjct: 215 EEALFIMVKAYDALGMTDLRDDADRVMRKNFPN 247


>gi|225023855|ref|ZP_03713047.1| hypothetical protein EIKCOROL_00721 [Eikenella corrodens ATCC
           23834]
 gi|224943329|gb|EEG24538.1| hypothetical protein EIKCOROL_00721 [Eikenella corrodens ATCC
           23834]
          Length = 269

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 103/212 (48%), Gaps = 10/212 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   ++ +N+S++   +      FP    A +S L +A+V Y   +  QA +  E
Sbjct: 39  KLYAEAHDEMESRNYSRSVRLYEILRARFPNTRQAVQSRLDTAYVYYKDEQQPQALAHVE 98

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLMLQYMSRIVER 168
           +++  YP   N DY  YL G+      + +            D +A +   Q  + ++ R
Sbjct: 99  QFLKLYPNHPNTDYALYLKGLIVLNQDKSIFNKLASQDWSDRDPKANREAYQVFNELITR 158

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           + +S Y   AR  +    + L   E+ I RYY++RG Y+AA  R Q +++ Y +  + EE
Sbjct: 159 FPDSKYANDAREKMARLVDALGGNEMAIARYYMQRGAYLAAANRAQGIVSRYQNTRYVEE 218

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           A+A ++ AY  L   + + +   ++ + +PQ 
Sbjct: 219 ALAIMMTAYARLEKPELSSDTRRVLAQNFPQS 250


>gi|297180915|gb|ADI17119.1| DNA uptake lipoprotein [uncultured gamma proteobacterium
           HF0070_03O15]
 gi|297181509|gb|ADI17696.1| DNA uptake lipoprotein [uncultured gamma proteobacterium
           HF0130_23I23]
          Length = 238

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 99/203 (48%), Gaps = 10/203 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y+++   +  +NF  A E  ++  R +PF   A ++     +  Y +G Y  A +  E+
Sbjct: 33  LYKQSQDRINAKNFIGAVESLSRIERFYPFGVYAEQARADLIYAFYMSGDYDNAYASSEK 92

Query: 120 YITQYPESKNVDYVYYLVGMS-------YAQMIRDVPYDQRATKLMLQYMSRIVE---RY 169
           +I  YP + N+DY Y++ GM+           +  +   +R     ++  + + E   RY
Sbjct: 93  FIRLYPRNTNIDYAYFMRGMTGYYEDDGLLSSVFSLDLSKRDVSTAMKSYADLTEFMIRY 152

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
             S YV  AR  +   RN +A+ E++   YYLKRG Y+ A+ R   VL N  D+   + A
Sbjct: 153 PESEYVDVARERLIFLRNLIASSELDGAEYYLKRGAYLGALNRANYVLKNIPDSSEKDRA 212

Query: 230 MARLVEAYVALALMDEAREVVSL 252
           +  + EAY  L   + A E+V+ 
Sbjct: 213 LRIMKEAYEKLGYDEYAEEIVAF 235


>gi|237748963|ref|ZP_04579443.1| competence lipoprotein ComL [Oxalobacter formigenes OXCC13]
 gi|229380325|gb|EEO30416.1| competence lipoprotein ComL [Oxalobacter formigenes OXCC13]
          Length = 266

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 103/214 (48%), Gaps = 14/214 (6%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L   N+ KA EYF +    +PF   A+++ +  A+  Y   +  QA +  E
Sbjct: 37  KLYREAKEELNSGNYEKAVEYFEKLEARYPFGIYAQQAQMDIAYAYYRQNEQAQALAAAE 96

Query: 119 EYITQYPESKNVDYVYYLVGM------------SYAQMIRDVPYDQRATKLMLQYMSRIV 166
            +I  +P   N+DY+YYL G+            ++ Q + +   D +A +        +V
Sbjct: 97  RFIKLHPNHPNIDYMYYLKGLINFNDRLGLLNFAFRQDLSER--DPKAAQDAFDAFKVLV 154

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
            RY +S Y K A   +      LA  E+ + +YY +RG Y+AA  R Q  + NY ++   
Sbjct: 155 TRYPDSVYAKDAMLRMKYLVTMLAKYEIHVAKYYYRRGAYLAAANRAQRTIKNYPESHVV 214

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           EEA+  + ++Y  L L D + +   + ++ YP  
Sbjct: 215 EEALYIMAQSYKKLGLYDLSADAERVFKQNYPDS 248


>gi|300312308|ref|YP_003776400.1| transmembrane protein [Herbaspirillum seropedicae SmR1]
 gi|300075093|gb|ADJ64492.1| transmembrane protein [Herbaspirillum seropedicae SmR1]
          Length = 266

 Score = 82.0 bits (201), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 10/214 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L    + KA +YF +    +PF   A+++ +  A+  Y   +  Q  +  +
Sbjct: 37  KLYSEAKDELNAGGYDKAIKYFEKLESRYPFGTYAQQAQMDIAYAYYRQNEQAQGLAAVD 96

Query: 119 EYITQYPESKNVDYVYYLVGM-------SYAQMIRDVPYDQRATKLM---LQYMSRIVER 168
            +I  +P   NVDY+YYL G+       S      D    +R  K M         + ER
Sbjct: 97  RFIKLHPNHPNVDYMYYLRGLINFNDRTSIFDTFTDQDNTERDPKAMRDAFDSFKLLAER 156

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           + +S Y   A   +    N ++  +V +  YY +RG YV+A  R Q  +  Y D+   EE
Sbjct: 157 FPDSKYTPDAIARMKYLVNAMSQYDVHVASYYFRRGAYVSAANRAQSAIKQYPDSPANEE 216

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           A+  L+ +Y AL       +   +IQ  YP   W
Sbjct: 217 ALFILMRSYEALGQTKLKEDTERIIQATYPNSPW 250


>gi|330831469|ref|YP_004394421.1| ComL family lipoprotein [Aeromonas veronii B565]
 gi|328806605|gb|AEB51804.1| Lipoprotein, ComL family [Aeromonas veronii B565]
          Length = 254

 Score = 82.0 bits (201), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 10/215 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y+KA L L   N+ +A E        +PF   + +  L   +  Y      QA +  + 
Sbjct: 39  LYQKARLKLDVGNYVQATELLEALDSRYPFGAYSNQVQLDLIYAYYKQDDTAQAIANIDR 98

Query: 120 YITQYPESKNVDYVYYLVGMS-------YAQMIRDVPYDQRAT---KLMLQYMSRIVERY 169
           +I   P  KN+DYV+Y+ G++       + Q +  +  D +     +   Q    +++ Y
Sbjct: 99  FIRLNPAHKNIDYVFYMRGLTNMAADYNFFQSLFGIDRDDKDPAYARQAFQDFKTLLQNY 158

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
            NS Y   AR  +   +N+LA  ++ +  YY+KR   VAA  R +L++  Y D    E+A
Sbjct: 159 PNSVYAADARARMIGLKNRLARYDLSVAEYYVKRDALVAAANRAKLIVETYPDTAETEKA 218

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
           +  +VE+Y +L +   A+    ++ + YP+   AR
Sbjct: 219 LEIMVESYDSLKMPQLAKHAREVLAKNYPENRLAR 253


>gi|46202602|ref|ZP_00052938.2| COG4105: DNA uptake lipoprotein [Magnetospirillum magnetotacticum
           MS-1]
          Length = 164

 Score = 82.0 bits (201), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 60/104 (57%)

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
           ++ +  +V+R+ +S Y + AR  + + R+ LA KE+ IGRYY   G ++AA+ RF++V  
Sbjct: 1   MKILHEVVDRFPSSVYARDARLKIDLARDHLAGKEMNIGRYYQNLGHHLAALNRFKMVAE 60

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
            Y    H  EA+ R+VE Y AL L  EA    +++   +P   W
Sbjct: 61  QYQTTTHVPEALYRMVELYTALGLDQEAARAAAVLGHNFPGSDW 104


>gi|269140176|ref|YP_003296877.1| lipoprotein [Edwardsiella tarda EIB202]
 gi|267985836|gb|ACY85665.1| lipoprotein [Edwardsiella tarda EIB202]
 gi|304560009|gb|ADM42673.1| Putative lipoprotein assembly complex component [Edwardsiella tarda
           FL6-60]
          Length = 245

 Score = 82.0 bits (201), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 10/205 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y  A   L++ NF  A          +PF   +++  L   +  Y +     A +  +
Sbjct: 34  EIYATAQQKLQDGNFKAAITQLEALDNRYPFGPYSQQVQLDLIYAYYKSADLPMAQATID 93

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168
            +I   P S+N+ YV Y+ G++   M          I     D    +   +  S++V+R
Sbjct: 94  RFIRLNPTSQNMPYVLYMRGLTDMAMDDSALQGFFGIDRSDRDPEHARQAFRDFSQLVQR 153

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS Y   A   +   +N+LA  E+ + R+Y KRG YVA + R + +L NY D +   +
Sbjct: 154 YPNSAYTTDATKRLLFLKNRLAKHELAVARFYTKRGAYVAVVNRVEQMLRNYPDTQATRD 213

Query: 229 AMARLVEAYVALALMDEAREVVSLI 253
           A+  +  AY  + L  EA +V  +I
Sbjct: 214 ALPLMENAYRQMGLNGEADKVQKII 238


>gi|325143910|gb|EGC66220.1| competence lipoprotein comL [Neisseria meningitidis M01-240013]
 gi|325206454|gb|ADZ01907.1| competence lipoprotein comL [Neisseria meningitidis M04-240196]
          Length = 267

 Score = 81.6 bits (200), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 103/212 (48%), Gaps = 10/212 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L   N+++A + +      FP +  AR+S L +A+  Y   +  +A +  E
Sbjct: 37  KLYAEAQDELNSSNYTRAVKLYEILESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIE 96

Query: 119 EYITQYPESKNVDYVYYLVGM-------SYAQMIRDVPY---DQRATKLMLQYMSRIVER 168
            +   +P+  N+DY  YL G+       S+   +    +   D +A +   Q  + +V+R
Sbjct: 97  RFRRLHPQHPNMDYALYLRGLVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQR 156

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           + NS Y   A   +    + L   E+ + RYY+KRG Y+AA  R Q ++ +Y +  + EE
Sbjct: 157 FPNSKYAADATARMVKLVDALGGNEISVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEE 216

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           ++A L  AY  L     A +   +++  +P+ 
Sbjct: 217 SLAILELAYQKLGKPQLAADTRRVLETNFPKS 248


>gi|161869645|ref|YP_001598811.1| competence lipoprotein [Neisseria meningitidis 053442]
 gi|161595198|gb|ABX72858.1| competence lipoprotein [Neisseria meningitidis 053442]
 gi|325127791|gb|EGC50699.1| competence lipoprotein comL [Neisseria meningitidis N1568]
 gi|325133783|gb|EGC56439.1| competence lipoprotein comL [Neisseria meningitidis M13399]
 gi|325203790|gb|ADY99243.1| competence lipoprotein comL [Neisseria meningitidis M01-240355]
          Length = 267

 Score = 81.6 bits (200), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 103/212 (48%), Gaps = 10/212 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L   N+++A + +      FP +  AR+S L +A+  Y   +  +A +  E
Sbjct: 37  KLYAEAQDELNSSNYTRAVKLYEILESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIE 96

Query: 119 EYITQYPESKNVDYVYYLVGM-------SYAQMIRDVPY---DQRATKLMLQYMSRIVER 168
            +   +P+  N+DY  YL G+       S+   +    +   D +A +   Q  + +V+R
Sbjct: 97  RFRRLHPQHPNMDYALYLRGLVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQR 156

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           + NS Y   A   +    + L   E+ + RYY+KRG Y+AA  R Q ++ +Y +  + EE
Sbjct: 157 FPNSKYAADATARMVKLVDALGGNEISVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEE 216

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           ++A L  AY  L     A +   +++  +P+ 
Sbjct: 217 SLAILELAYQKLGKPQLAADTRRVLETNFPKS 248


>gi|15599741|ref|NP_253235.1| competence protein ComL [Pseudomonas aeruginosa PAO1]
 gi|107099792|ref|ZP_01363710.1| hypothetical protein PaerPA_01000810 [Pseudomonas aeruginosa PACS2]
 gi|116052690|ref|YP_793006.1| competence protein ComL [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218893640|ref|YP_002442509.1| competence protein ComL [Pseudomonas aeruginosa LESB58]
 gi|254238707|ref|ZP_04932030.1| competence protein ComL [Pseudomonas aeruginosa C3719]
 gi|254244557|ref|ZP_04937879.1| competence protein ComL [Pseudomonas aeruginosa 2192]
 gi|296391366|ref|ZP_06880841.1| competence protein ComL [Pseudomonas aeruginosa PAb1]
 gi|12231047|sp|P33641|Y9F5_PSEAE RecName: Full=UPF0169 lipoprotein PA4545; AltName: Full=ORFY;
           Flags: Precursor
 gi|9950789|gb|AAG07933.1|AE004868_4 competence protein ComL [Pseudomonas aeruginosa PAO1]
 gi|32423743|gb|AAP81267.1| competence protein [Pseudomonas aeruginosa PA14]
 gi|115587911|gb|ABJ13926.1| competence lipoprotein ComL [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126170638|gb|EAZ56149.1| competence protein ComL [Pseudomonas aeruginosa C3719]
 gi|126197935|gb|EAZ61998.1| competence protein ComL [Pseudomonas aeruginosa 2192]
 gi|218773868|emb|CAW29682.1| competence protein ComL [Pseudomonas aeruginosa LESB58]
          Length = 341

 Score = 81.6 bits (200), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 106/222 (47%), Gaps = 10/222 (4%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           ++V +   + ++Y++A   L  ++++ A          +PF   A ++ L   +  Y   
Sbjct: 23  ETVDENLSESQLYQQAQDDLNNKSYNSAVTKLKALESRYPFGRYAEQAQLELIYANYKNM 82

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSY-----AQMIRDVPYDQR-----ATKLM 158
           + + A +  E +I  +P+  NVDY YYL G+S        + R +P D       A +  
Sbjct: 83  EPEAARAAAERFIRLHPQHPNVDYAYYLKGLSSFDQDRGLLARFLPLDMTKRDPGAARDS 142

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
               +++  R+ NS Y   A+  +   RN LAA EV +G YYLKR  YVAA  R + V+ 
Sbjct: 143 FNEFAQLTSRFPNSRYAPDAKARMVYLRNLLAAYEVHVGHYYLKRQAYVAAANRGRYVVE 202

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           N+ +     + +A +VEAY  L L D A   +  ++  YP  
Sbjct: 203 NFQETPAVGDGLAIMVEAYRRLGLDDLASTSLETLKLNYPDN 244


>gi|237653788|ref|YP_002890102.1| outer membrane assembly lipoprotein YfiO [Thauera sp. MZ1T]
 gi|237625035|gb|ACR01725.1| outer membrane assembly lipoprotein YfiO [Thauera sp. MZ1T]
          Length = 269

 Score = 81.6 bits (200), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 10/217 (4%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +++Y +A   + E  + +A   F +    +P+   A+++ L  A+  Y  G+   A +  
Sbjct: 40  QKLYSEAKASMSEGGYDRAVTLFEKLEARYPYGRFAQQAQLEVAYAYYKQGEQALALAAA 99

Query: 118 EEYITQYPESKNVDYVYYLVGMS--------YAQMIRD--VPYDQRATKLMLQYMSRIVE 167
           + +I  +P   NVDY YYL G+          A + R      D +  +        +VE
Sbjct: 100 DRFIKLHPNHPNVDYAYYLKGLVNFNEDLGLLAGLSRQDLSERDPKGAREAFDSFRELVE 159

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
           R+  S Y   +R  +    N LA+ EV + RYY  RG YVAAI R Q  + N+  A   E
Sbjct: 160 RFPESRYADDSRARMQYLINSLASHEVHVSRYYYNRGAYVAAINRAQTAVNNFPQAPAIE 219

Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
           EA+  +V +Y  L +     +   ++++ +P   + R
Sbjct: 220 EALFLMVMSYDKLGMAQLRDDADRVMRKNFPDSVYFR 256


>gi|121604766|ref|YP_982095.1| hypothetical protein Pnap_1864 [Polaromonas naphthalenivorans CJ2]
 gi|120593735|gb|ABM37174.1| putative transmembrane protein [Polaromonas naphthalenivorans CJ2]
          Length = 274

 Score = 81.6 bits (200), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 87/178 (48%), Gaps = 10/178 (5%)

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS--------YAQ 143
           +A+++ L  A+ QY  G+  QA +    ++  +P S  +DY  YL G+         +  
Sbjct: 78  LAQQAQLDKAYAQYKGGEQAQALATLNRFMKLHPASPAMDYALYLKGLVNFNDNLGIFGS 137

Query: 144 MIRD--VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
           + R      DQ A K   +    +V R+ +S Y   AR  +    N LA  EV + RYY 
Sbjct: 138 ISRQDLSERDQNAAKESFESFKELVARFPDSRYAPDARLRMNYIVNSLAKSEVHVARYYY 197

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            RG YVAAI R Q  +A+Y D    EEA   L ++Y AL + +   ++  ++ + YPQ
Sbjct: 198 SRGAYVAAINRAQSAIADYRDVPALEEATFILYKSYDALGMTELRDDMRRIMDKSYPQ 255


>gi|146329582|ref|YP_001210176.1| competence protein ComL [Dichelobacter nodosus VCS1703A]
 gi|146233052|gb|ABQ14030.1| competence protein ComL [Dichelobacter nodosus VCS1703A]
          Length = 278

 Score = 81.6 bits (200), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 108/208 (51%), Gaps = 13/208 (6%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            ++Y+     ++  +++ A +YF +    +P+  +A++S+L  A+  Y AG+ ++A +  
Sbjct: 34  HQLYQAGKTEMESSSYTTAIDYFTKLLARYPYGVLAQQSMLDIAYSYYRAGEAEKALAQL 93

Query: 118 EEYITQYPESKNVDYVYYLVGM-SYAQMI----RDVPYDQRAT-----KLMLQYMSRIVE 167
           + +   YP+   +DY  Y+ G+  Y + I    R +P D   T     K      +++VE
Sbjct: 94  DSFSKTYPQHPYIDYALYMKGVVEYEKNISFFKRLLPTDLSQTDPTPLKNAFDLFAQLVE 153

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
           R+  S Y + AR+ +    N L   ++EI  +YL++G++VAA  R + +L +Y     A 
Sbjct: 154 RFPQSEYAEDARYRMIFLHNLLGKHDLEIADFYLRKGDFVAAAARAKNILEHYETTPSAP 213

Query: 228 EAMARLVEAYVALA---LMDEAREVVSL 252
            A+A ++ AY  L    L D+A  V ++
Sbjct: 214 YALAIMIRAYRELGQKLLADDAMRVFNM 241


>gi|313107190|ref|ZP_07793389.1| competence protein ComL [Pseudomonas aeruginosa 39016]
 gi|310879891|gb|EFQ38485.1| competence protein ComL [Pseudomonas aeruginosa 39016]
          Length = 341

 Score = 81.6 bits (200), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 106/222 (47%), Gaps = 10/222 (4%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           ++V +   + ++Y++A   L  ++++ A          +PF   A ++ L   +  Y   
Sbjct: 23  ETVDENLSESQLYQQAQDDLNNKSYNSAVTKLKALESRYPFGRYAEQAQLELIYANYKNM 82

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSY-----AQMIRDVPYDQR-----ATKLM 158
           + + A +  E +I  +P+  NVDY YYL G+S        + R +P D       A +  
Sbjct: 83  EPEAARAAAERFIRLHPQHPNVDYAYYLKGLSSFDQDRGLLARFLPLDMTKRDPGAARDS 142

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
               +++  R+ NS Y   A+  +   RN LAA EV +G YYLKR  YVAA  R + V+ 
Sbjct: 143 FNEFAQLTSRFPNSRYAPDAKARMVYLRNLLAAYEVHVGHYYLKRQAYVAAANRGRYVVE 202

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           N+ +     + +A +VEAY  L L D A   +  ++  YP  
Sbjct: 203 NFQETPAVGDGLAIMVEAYRRLGLDDLASTSLETLKLNYPDN 244


>gi|152988068|ref|YP_001350516.1| competence protein ComL [Pseudomonas aeruginosa PA7]
 gi|150963226|gb|ABR85251.1| competence protein ComL [Pseudomonas aeruginosa PA7]
          Length = 341

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 105/222 (47%), Gaps = 10/222 (4%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           ++V +   + ++Y++A   L  ++++ A          +PF   A ++ L   +  Y   
Sbjct: 23  ETVDENLSESQLYQQAQDDLNNKSYNSAVTKLKALESRYPFGRYAEQAQLELIYANYKNM 82

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV-----PYDQR-----ATKLM 158
           + + A +  E +I  +P+  NVDY YYL G+S     R +     P D       A +  
Sbjct: 83  EPEAARAAAERFIRLHPQHPNVDYAYYLKGLSSFDQDRGLVARFLPLDMTKRDPGAARDS 142

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
               +++  R+ NS Y   A+  +   RN LAA EV +G YYLKR  YVAA  R + V+ 
Sbjct: 143 FNEFAQLTSRFPNSRYAPDAKARMVYLRNLLAAYEVHVGHYYLKRQAYVAAANRGRYVVE 202

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           N+ +     + +A +VEAY  L L D A   +  ++  YP  
Sbjct: 203 NFQETPAVGDGLAIMVEAYRRLGLDDLASTSLETLKLNYPDN 244


>gi|153209399|ref|ZP_01947385.1| competence lipoprotein ComL [Coxiella burnetii 'MSU Goat Q177']
 gi|120575370|gb|EAX31994.1| competence lipoprotein ComL [Coxiella burnetii 'MSU Goat Q177']
          Length = 255

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 10/216 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E++      L ++++S+A + F      +PF   A ++ L   +  Y       A +  +
Sbjct: 35  ELFTSGERALAKKDYSEAVKNFEALDAIYPFGPHAEQAQLDIIYAYYKNNDTSSAIAAAD 94

Query: 119 EYITQYPESKNVDYVYYL-------VGMSYAQ-MIRDVPYDQRATKLMLQYMS--RIVER 168
            YI  YP  +NVDY YY+       +G+S+ Q + R  P  +  + L   + S   + E 
Sbjct: 95  RYIRLYPRGRNVDYAYYMRGVIGFDLGLSWLQKLARVSPVSRDVSTLQQSFTSFATLAEV 154

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           + +S Y   A   +   RN +A +E+ I  +Y+KR  YVAA  R   V+ ++  +    +
Sbjct: 155 FPHSRYTPDALTRMRYIRNLMAQREIMIAEFYMKRRAYVAAANRGSYVVQHFQGSPQVAK 214

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
           A+A +V+AY AL L   A     L+Q  YP    AR
Sbjct: 215 ALAIMVQAYRALGLPKMADASNHLLQTNYPHTLEAR 250


>gi|319794366|ref|YP_004156006.1| outer membrane assembly lipoprotein yfio [Variovorax paradoxus EPS]
 gi|315596829|gb|ADU37895.1| outer membrane assembly lipoprotein YfiO [Variovorax paradoxus EPS]
          Length = 268

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 90/178 (50%), Gaps = 10/178 (5%)

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM--------SYAQ 143
           +A+++ L  A+ QY  G+   A +  + ++  +P S  +DY  YL G+         +A 
Sbjct: 72  LAQQAQLEKAYAQYKGGEKASAIATIDRFMKLHPASPALDYALYLKGVINFNDDLGMFAF 131

Query: 144 MIRD--VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
           + R      DQ+A K   +    +V R+ +S Y   AR  +    N LA  EV + RYY 
Sbjct: 132 LTRQDLSERDQKAAKESFESFRDLVTRFPDSRYAPDARQRMNYIVNSLAQYEVHVARYYY 191

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            RG Y+AAI R Q+ LA+Y +    EEA+  +V++Y AL + D   +   ++   YPQ
Sbjct: 192 TRGAYLAAINRAQIALADYREVPALEEALYIMVKSYDALGMKDLRDDAQRVLTTNYPQ 249


>gi|229588325|ref|YP_002870444.1| putative lipoprotein [Pseudomonas fluorescens SBW25]
 gi|229360191|emb|CAY47048.1| putative lipoprotein [Pseudomonas fluorescens SBW25]
          Length = 341

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 113/245 (46%), Gaps = 21/245 (8%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           + I    A C        S++DV  +++++V    E+Y+ A   L   +++ A       
Sbjct: 9   IAILAMTAAC-------SSTKDVVDENLSEV----ELYQLAQKDLDNNSYTSATAKLKAL 57

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYA 142
              +PF   A ++ L   +  Y   + + A S  E +I  +P+  NVDY YY+ G+ S+ 
Sbjct: 58  ESRYPFGRYADQAQLELIYANYKNAEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFD 117

Query: 143 Q----MIRDVPYDQR-----ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
           Q    + R +P D       A +      +++  RY NS Y   A+  +   RN LA+ E
Sbjct: 118 QDVGLLARFLPLDMTKRDPGAARDSYNEFAQLTSRYPNSRYAPDAKQRMIYLRNLLASYE 177

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           + +  YYL R  YVAA  R + V+ N+ +     + +A + EAY  L L + A   +  +
Sbjct: 178 IHVAHYYLTRQAYVAAANRGRYVVENFQETPSVGDGLAVMTEAYQRLHLDELASTSLETL 237

Query: 254 QERYP 258
           +  YP
Sbjct: 238 KLNYP 242


>gi|294339950|emb|CAZ88313.1| Competence lipoprotein comL precursor [Thiomonas sp. 3As]
          Length = 273

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 117/264 (44%), Gaps = 25/264 (9%)

Query: 9   ICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL 68
           + ++  W  +L    L    ++ +  L G     S+D  L   +      ++Y +A   +
Sbjct: 3   VALYRLWTLRL----LGAAAAVVLLGLAGCASTPSKDETLGWSS-----AKLYAEAKDEM 53

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
              N  K  + + +    +P+  +A+++L+  A+  Y  G+  QA +  + ++  YP + 
Sbjct: 54  NSGNTDKGVKLYEKLESRYPYGLLAQQALIEIAYGNYKQGERAQALAAADRFLKLYPNNP 113

Query: 129 NVDYVYYLVGM----------SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
             DYV YL G+          S+    +    DQ A K   +    +V R+  S Y   A
Sbjct: 114 YTDYVLYLKGLINFNTNQGWFSFLSDQKLYERDQAAAKQSFESFKELVTRFPESKYAPDA 173

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
           R  +    N LA  E  +  +Y +RG YVAA  R Q  + +Y DA   + A+A LV+AY 
Sbjct: 174 RQRMRYIVNSLAEYETHVALFYYRRGAYVAAADRAQRAIEHYQDAPANQLALAILVDAYG 233

Query: 239 ALA---LMDEAREVVSLIQERYPQ 259
            L    L D+A  V+ L    YPQ
Sbjct: 234 KLGMTQLRDDAERVLKL---NYPQ 254


>gi|161830296|ref|YP_001596931.1| competence lipoprotein ComL [Coxiella burnetii RSA 331]
 gi|161762163|gb|ABX77805.1| competence lipoprotein ComL [Coxiella burnetii RSA 331]
          Length = 255

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 10/216 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E++      L ++++S+A + F      +PF   A ++ L   +  Y       A +  +
Sbjct: 35  ELFTSGERALAKKDYSEAVKNFEALDAIYPFGPHAEQAQLDIIYAYYKNNDTSSAIAAAD 94

Query: 119 EYITQYPESKNVDYVYYL-------VGMSYAQ-MIRDVPYDQRATKLMLQYMS--RIVER 168
            YI  YP  +NVDY YY+       +G+S+ Q + R  P  +  + L   + S   + E 
Sbjct: 95  RYIRLYPRGRNVDYAYYMRGVISFDLGLSWLQKLARVSPVSRDVSTLQQSFTSFATLAEV 154

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           + +S Y   A   +   RN +A +E+ I  +Y+KR  YVAA  R   V+ ++  +    +
Sbjct: 155 FPHSRYTPDALTRMRYIRNLMAQREIMIAEFYMKRRAYVAAANRGSYVVQHFQGSPQVAK 214

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
           A+A +V+AY AL L   A     L+Q  YP    AR
Sbjct: 215 ALAIMVQAYRALGLPKMADASNHLLQTNYPHTLEAR 250


>gi|225076528|ref|ZP_03719727.1| hypothetical protein NEIFLAOT_01576 [Neisseria flavescens
           NRL30031/H210]
 gi|224952207|gb|EEG33416.1| hypothetical protein NEIFLAOT_01576 [Neisseria flavescens
           NRL30031/H210]
          Length = 267

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 102/212 (48%), Gaps = 10/212 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L   N+++A + +      FP    A++S L +A+  Y   + ++A +   
Sbjct: 37  KLYAEAQDELNSNNYTRAVKLYEILESRFPNGRYAQQSQLDTAYAYYKDDEPEKALAAIA 96

Query: 119 EYITQYPESKNVDYVYYLVGM-------SYAQMIRDVPY---DQRATKLMLQYMSRIVER 168
            +   +P+  N+DY  YL G+       S+   +    +   D +A +   Q  + +V+R
Sbjct: 97  RFQRHHPQHPNMDYALYLKGLVLFNEDQSFLNKLASQDWSDRDPKANRDAYQAFAELVQR 156

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS Y   A   +    + L   E+ + RYY+KRG YVAA  R Q +++ Y +  + EE
Sbjct: 157 YPNSKYAADATERMAKLVDALGGNEISVARYYMKRGAYVAAANRAQKIVSRYQNTRYVEE 216

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           A+A +  AY  L     A +   +++  +PQ 
Sbjct: 217 ALAMMELAYKKLDKPQLAADTRRVLETNFPQS 248


>gi|215919037|ref|NP_819783.2| competence lipoprotein ComL [Coxiella burnetii RSA 493]
 gi|206583922|gb|AAO90297.2| lipoprotein, ComL family [Coxiella burnetii RSA 493]
          Length = 272

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 10/216 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E++      L ++++S+A + F      +PF   A ++ L   +  Y       A +  +
Sbjct: 52  ELFTSGERALAKKDYSEAVKNFEALDAIYPFGPHAEQAQLDIIYAYYKNNDTSSAIAAAD 111

Query: 119 EYITQYPESKNVDYVYYL-------VGMSYAQ-MIRDVPYDQRATKLMLQYMS--RIVER 168
            YI  YP  +NVDY YY+       +G+S+ Q + R  P  +  + L   + S   + E 
Sbjct: 112 RYIRLYPRGRNVDYAYYMRGVISFDLGLSWLQKLARVSPVSRDVSTLQQSFTSFATLAEV 171

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           + +S Y   A   +   RN +A +E+ I  +Y+KR  YVAA  R   V+ ++  +    +
Sbjct: 172 FPHSRYTPDALTRMRYIRNLMAQREIMIAEFYMKRRAYVAAANRGSYVVQHFQGSPQVAK 231

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
           A+A +V+AY AL L   A     L+Q  YP    AR
Sbjct: 232 ALAIMVQAYRALGLPKMADASNHLLQTNYPHTLEAR 267


>gi|209363886|ref|YP_001424166.2| lipoprotein, ComL family [Coxiella burnetii Dugway 5J108-111]
 gi|212218243|ref|YP_002305030.1| lipoprotein, ComL family [Coxiella burnetii CbuK_Q154]
 gi|207081819|gb|ABS77330.2| lipoprotein, ComL family [Coxiella burnetii Dugway 5J108-111]
 gi|212012505|gb|ACJ19885.1| lipoprotein, ComL family [Coxiella burnetii CbuK_Q154]
          Length = 272

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 10/216 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E++      L ++++S+A + F      +PF   A ++ L   +  Y       A +  +
Sbjct: 52  ELFTSGERALAKKDYSEAVKNFEALDAIYPFGPHAEQAQLDIIYAYYKNNDTSSAIAAAD 111

Query: 119 EYITQYPESKNVDYVYYL-------VGMSYAQ-MIRDVPYDQRATKLMLQYMS--RIVER 168
            YI  YP  +NVDY YY+       +G+S+ Q + R  P  +  + L   + S   + E 
Sbjct: 112 RYIRLYPRGRNVDYAYYMRGVIGFDLGLSWLQKLARVSPVSRDVSTLQQSFTSFATLAEV 171

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           + +S Y   A   +   RN +A +E+ I  +Y+KR  YVAA  R   V+ ++  +    +
Sbjct: 172 FPHSRYTPDALTRMRYIRNLMAQREIMIAEFYMKRRAYVAAANRGSYVVQHFQGSPQVAK 231

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
           A+A +V+AY AL L   A     L+Q  YP    AR
Sbjct: 232 ALAIMVQAYRALGLPKMADASNHLLQTNYPHTLEAR 267


>gi|296135787|ref|YP_003643029.1| outer membrane assembly lipoprotein YfiO [Thiomonas intermedia K12]
 gi|295795909|gb|ADG30699.1| outer membrane assembly lipoprotein YfiO [Thiomonas intermedia K12]
          Length = 273

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 117/264 (44%), Gaps = 25/264 (9%)

Query: 9   ICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL 68
           + ++  W  +L    L    ++ +  L G     S+D  L   +      ++Y +A   +
Sbjct: 3   VVLYRLWTLRL----LGAAAAVVLLGLAGCASTPSKDETLGWSS-----AKLYAEAKDEM 53

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
              N  K  + + +    +P+  +A+++L+  A+  Y  G+  QA +  + ++  YP + 
Sbjct: 54  NSGNTDKGVKLYEKLESRYPYGLLAQQALIEIAYGNYKQGERAQALAAADRFLKLYPNNP 113

Query: 129 NVDYVYYLVGM----------SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
             DYV YL G+          S+    +    DQ A K   +    +V R+  S Y   A
Sbjct: 114 YTDYVLYLKGLINFNTDQGWFSFLSDQKLYERDQAAAKQSFESFKELVTRFPESKYAPDA 173

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
           R  +    N LA  E  +  +Y +RG YVAA  R Q  + +Y DA   + A+A LV+AY 
Sbjct: 174 RQRMRYIVNSLAEYETHVALFYYRRGAYVAAADRAQRAIEHYQDAPANQLALAILVDAYG 233

Query: 239 ALA---LMDEAREVVSLIQERYPQ 259
            L    L D+A  V+ L    YPQ
Sbjct: 234 KLGMTQLRDDAERVLKL---NYPQ 254


>gi|56460292|ref|YP_155573.1| competence lipoprotein ComL [Idiomarina loihiensis L2TR]
 gi|56179302|gb|AAV82024.1| Competence lipoprotein ComL [Idiomarina loihiensis L2TR]
          Length = 256

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 115/245 (46%), Gaps = 15/245 (6%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           +F S+    L G   QS  +    S T + Y   +Y++A   +   N + A E  +  ++
Sbjct: 11  VFSSVLGLMLAGCSSQSDEEQV--SKTQIEY---LYDQAQESMANGNLNLAQEQLSSLNK 65

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
            +PF   A +  L   ++ Y      +A +  + +I+  P  K+VDY  Y+ G+   +  
Sbjct: 66  RYPFGPFAHQIQLDLIYLHYKLDNTDEALAAIDRFISLNPNHKDVDYALYMRGLVNQRAE 125

Query: 146 RDVPY----------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
            +  +          D    +   +  + +V +Y  S Y   A+  +   +++LA KE+ 
Sbjct: 126 HNAIHNLAGVDRSDRDSSMAQAAFKDFAELVRKYPKSEYAADAKKRLIALKSRLAKKELA 185

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           I +YY++R  Y+AA  R + VL ++SD    E A+A +VE+Y  L L +   + + +++ 
Sbjct: 186 IAQYYMERQAYLAAANRGRYVLEHFSDTPEVENALAIMVESYDQLELPELREDAMKVLRA 245

Query: 256 RYPQG 260
            +P+ 
Sbjct: 246 NFPEN 250


>gi|110833336|ref|YP_692195.1| competence lipoprotein ComL [Alcanivorax borkumensis SK2]
 gi|110646447|emb|CAL15923.1| competence lipoprotein ComL, putative [Alcanivorax borkumensis SK2]
          Length = 272

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 10/210 (4%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +A   ++ +N+  A +   +    FP+   A +S L   + QY +  Y       + +
Sbjct: 33  YREARESIESKNYLTAIDQLKELEARFPYGDYAEQSALDLIYAQYKSVDYPATVVAAQRF 92

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYT 170
           +  +P    +DY  Y+ G++   M + +            D  A K   +   R+V R+ 
Sbjct: 93  MRNHPAHPRMDYALYMRGLANFNMEKGLFDNMVASDRSSKDMAAAKDAFRDFERLVSRFP 152

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
           +S Y   AR  +   RNQLA +E+ + RYY +RG  VA++ R Q V+ +Y      EE++
Sbjct: 153 DSEYAPDARARMVHIRNQLARQELHVARYYARRGAIVASLNRAQYVVKHYQHTPAVEESL 212

Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQG 260
           A +V+ Y  L L  +A +  +++   +P  
Sbjct: 213 AIMVKGYQRLELPKQAEKSRAVLALNWPNS 242


>gi|256257867|ref|ZP_05463403.1| COML, competence lipoprotein [Brucella abortus bv. 9 str. C68]
 gi|260884157|ref|ZP_05895771.1| competence protein ComL [Brucella abortus bv. 9 str. C68]
 gi|260873685|gb|EEX80754.1| competence protein ComL [Brucella abortus bv. 9 str. C68]
          Length = 162

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 1/145 (0%)

Query: 29  SIAVCFLVGWERQSSRDVYLDS-VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
           +IAV   +      + D+ L   V  +    ++Y + +  L      +A + F    R  
Sbjct: 18  TIAVLIPLAGCASKNDDIDLTKYVETIDPADKLYNEGLANLDAGRLDEAAKKFAAIDRQH 77

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
           P+   ARK+L+M+AF  Y  G Y++A S+ + Y T YP S    Y YY++G+SY + I D
Sbjct: 78  PYTEWARKALVMAAFTNYRKGNYEEAISMAKRYNTLYPTSPESAYAYYIIGLSYFRQIPD 137

Query: 148 VPYDQRATKLMLQYMSRIVERYTNS 172
           V  DQ A++  +  M  +++R+ NS
Sbjct: 138 VTRDQAASRRAIAAMQEVIDRFPNS 162


>gi|329895228|ref|ZP_08270892.1| putative component of the lipoprotein assembly complex [gamma
           proteobacterium IMCC3088]
 gi|328922466|gb|EGG29808.1| putative component of the lipoprotein assembly complex [gamma
           proteobacterium IMCC3088]
          Length = 303

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 117/249 (46%), Gaps = 23/249 (9%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L IF  +A C L+     S+ +  LDS  +   Q ++Y +A  +L+ +N+  A +   Q 
Sbjct: 20  LRIF--LASCILLLGACASNDE--LDSQANAAEQ-QIYSEAQKYLRSKNYDMAIKALQQL 74

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS--- 140
              +PF   A ++ L   +  Y A + + A      +I  +P+  ++DY +Y+ G++   
Sbjct: 75  ESRYPFGKYAEQAQLEIIYAHYGAYEPEAAIEAANRFIRLHPQHPSIDYAFYMKGLAAYS 134

Query: 141 -----------YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
                       ++  RD  + + A     Q ++R  E    S Y   AR  +   RN L
Sbjct: 135 GNSNIFSRFLPTSESSRDTKHIEEAFTEFAQLLARFPE----SEYGADARARMVHLRNLL 190

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           A  E+++  YY +RG Y+AA+ R + V+ NY  +    +A+A +   Y+ L + + A+  
Sbjct: 191 ARHEIDVANYYFRRGAYLAAVNRGRYVIENYQGSTAMADALAVMAHGYLLLDMPELAQTS 250

Query: 250 VSLIQERYP 258
           +  ++  YP
Sbjct: 251 IDTLKVNYP 259


>gi|304387999|ref|ZP_07370171.1| competence lipoprotein ComL [Neisseria meningitidis ATCC 13091]
 gi|304337998|gb|EFM04136.1| competence lipoprotein ComL [Neisseria meningitidis ATCC 13091]
          Length = 267

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 103/212 (48%), Gaps = 10/212 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L   N+++A + +      FP +  AR+S L +A+  Y   +  +A +  E
Sbjct: 37  KLYAEAQDELNSSNYTRAVKLYEILESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIE 96

Query: 119 EYITQYPESKNVDYVYYLVGM-------SYAQMIRDVPY---DQRATKLMLQYMSRIVER 168
            +   +P+  N+DY  YL G+       S+   +    +   D +A +   Q  + +V+R
Sbjct: 97  RFRRLHPQHPNMDYALYLRGLVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQR 156

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           + NS Y   A   +    + L   E+ + RYY+KRG Y+AA  R Q ++ +Y +  + EE
Sbjct: 157 FPNSKYAADATARMIKLVDALGGNEMSVARYYMKRGAYIAATNRAQKIIGSYQNTRYVEE 216

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           ++A L  AY  L     A +   +++  +P+ 
Sbjct: 217 SLAILELAYQKLGKPQLAADTRRVLETNFPKS 248


>gi|332184382|gb|AEE26636.1| Competence protein [Francisella cf. novicida 3523]
          Length = 274

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 10/211 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y KA   ++ + +  A   +      +PF  +A K ++   +V Y   +   A +LG++
Sbjct: 40  IYAKAHEQMRNEKYFDAIRSYKSLVAQYPFTPLAEKGMVDLIYVYYMDDESTMALALGQQ 99

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDV-----PYD---QRATKLMLQYMS--RIVERY 169
           +I  YP S    YVYY++G+   +  R +     PYD      T     Y +  R ++  
Sbjct: 100 FIKMYPYSIYKGYVYYMIGVVGFEDGRGMLQTYAPYDMNYHDPTGYQDAYTNFERAIQLD 159

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
            N  +V  A+  +    N +A    +I  +Y KRG Y AAI R   V+ NY  +   E+A
Sbjct: 160 PNGSFVPDAKRRMVFINNTIARHYDDIAHFYFKRGAYNAAIDRASQVIRNYPQSTSTEDA 219

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260
           +   + AY  L L D+A+  + ++++ YP+ 
Sbjct: 220 LVLTIRAYNKLGLYDQAKANIRVLKKNYPKN 250


>gi|163856157|ref|YP_001630454.1| competence lipoprotein precursor [Bordetella petrii DSM 12804]
 gi|163259885|emb|CAP42186.1| competence lipoprotein precursor [Bordetella petrii]
          Length = 303

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 17/227 (7%)

Query: 50  SVTDVRYQR-------EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
           S TD +Y +       ++Y  A        +++A E        +PF   A+++L+  A+
Sbjct: 56  SGTDTKYDKTAGWSAEQLYADAKAETAAGAWNEARERLTAIESRYPFGVYAQQALIDLAY 115

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS--------YAQMIRDVPYDQRA 154
           V +  G+ +QA +  + +   YP     DY+ YL G+          + +    P ++  
Sbjct: 116 VNWKDGENEQALAAIDRFQQMYPNHPGTDYMLYLKGLINFTPASAFMSNLTGQDPAERDP 175

Query: 155 TKLMLQY--MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
             L   Y   + +++RY +S Y   A   VT   N +A  EV + RYY +RG YVAA  R
Sbjct: 176 KGLRASYDAFNELIKRYPSSKYTPDAEKRVTWLVNAIAMNEVYVARYYYERGAYVAAANR 235

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            Q V+ ++     AEEA+  +  +Y  L + D   +   +++  YP 
Sbjct: 236 AQTVITDFEGVPAAEEALVIMAASYDKLGMTDLKNDAERVLKTNYPD 282


>gi|223042000|ref|ZP_03612183.1| putative lipoprotein [Actinobacillus minor 202]
 gi|240949470|ref|ZP_04753810.1| putative lipoprotein [Actinobacillus minor NM305]
 gi|223017198|gb|EEF15627.1| putative lipoprotein [Actinobacillus minor 202]
 gi|240296043|gb|EER46704.1| putative lipoprotein [Actinobacillus minor NM305]
          Length = 260

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 122/245 (49%), Gaps = 17/245 (6%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           KF       +A   +VG    +++++   S  D+      Y K   +L++ +++ A  Y 
Sbjct: 3   KFTSLASLILAGLLVVGCSSNANKELEEASAQDL------YSKGQTYLQDGDYNSAIRYL 56

Query: 81  NQC-SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
           +   ++    +    ++ L   + QY  G+Y +A  + E ++  YP S  +DYV+YL  +
Sbjct: 57  DAVGTKGGQQSQFGEQTQLSLIYAQYKIGEYYKALDIAERFVRAYPNSPQMDYVFYLAAL 116

Query: 140 SYAQM----IRD---VPYDQRATKLMLQ---YMSRIVERYTNSPYVKGARFYVTVGRNQL 189
           S A++    I+D   V    R+T  +         IV+ + NS YV  A+ ++   +N+L
Sbjct: 117 SNARLGDNFIQDFFGVNRSSRSTDSVRNAYGSFQTIVKEFPNSKYVPEAQQWMVYLKNRL 176

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           A  E++I ++Y +R  YVA   R + ++  Y D++   EA+  + +A+  + L D A +V
Sbjct: 177 AEHELQIVKFYDEREAYVAVANRVEEMMNFYPDSKPTLEALPYMQKAFEKMGLNDSAEKV 236

Query: 250 VSLIQ 254
            S+I+
Sbjct: 237 ASIIE 241


>gi|298368342|ref|ZP_06979660.1| competence lipoprotein ComL [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298282345|gb|EFI23832.1| competence lipoprotein ComL [Neisseria sp. oral taxon 014 str.
           F0314]
          Length = 267

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 10/210 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L   N+++A + +      FP    A++S L +A+  Y   + ++A +  E
Sbjct: 37  KLYAEAQDELNSNNYTRAIKLYELLESRFPNGRYAQQSQLDTAYAYYKDDEPEKALAAIE 96

Query: 119 EYITQYPESKNVDYVYYLVGM-------SYAQMIRDVPY---DQRATKLMLQYMSRIVER 168
            +   +P+  N+DY  YL G+       S+   +    +   D +A +   Q  S++V+ 
Sbjct: 97  RFQRHHPQHPNMDYALYLKGLVLFNEDQSFLNKLASQDWSDRDPKANRDAYQAFSQLVQL 156

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS Y   A   +T   + L   E+ I RYY+KRG Y+AAI R Q ++  Y +  + EE
Sbjct: 157 YPNSKYAPDATERMTKLVDALGGNEIAIARYYMKRGAYLAAINRAQKIVEQYQNTRYVEE 216

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYP 258
           ++A +  AY  L     A +   ++   +P
Sbjct: 217 SLAMMELAYKKLGKPQLAADSRRILAGNFP 246


>gi|254797247|ref|YP_003082089.1| putative competence protein ComL [Neorickettsia risticii str.
           Illinois]
 gi|254590495|gb|ACT69857.1| putative competence protein ComL [Neorickettsia risticii str.
           Illinois]
          Length = 227

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 6/225 (2%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           +LY F    F    +C L G     S+ V    V +   +  +Y  AVL L+++N+  A 
Sbjct: 4   KLYNFLFVCF----LCVLSGCGVGKSKKVLNSKVRED--ELSMYSSAVLSLEKKNYKAAK 57

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           E F + +   PF+ +  K+      + Y  GK+  AA   E Y+  YP+ + VD V  + 
Sbjct: 58  ELFEKVADIAPFSSIGEKAKASYTKILYDEGKFAAAAGSAEGYLLNYPDGEKVDQVLNIK 117

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
           G +Y QM +                + +++ +  S YV  A+  +      +A K   IG
Sbjct: 118 GNAYFQMSKGRTNSGEFADKARDAFTVLIQTFPASEYVTDAQKKLLEIDEIMAEKIFSIG 177

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
            +Y K   Y AAI RF  +L +YS  +  + A+++ +EAY  L +
Sbjct: 178 SFYFKEMNYHAAIARFDELLRDYSRTKLYDAALSKRLEAYKMLGV 222


>gi|171059557|ref|YP_001791906.1| putative transmembrane protein [Leptothrix cholodnii SP-6]
 gi|170777002|gb|ACB35141.1| putative transmembrane protein [Leptothrix cholodnii SP-6]
          Length = 284

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 91/181 (50%), Gaps = 10/181 (5%)

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS--------YAQ 143
           +A+++ L  AF+ Y   +  Q+ ++ E ++  +P S   DY YYL G+         +  
Sbjct: 93  LAQQAQLERAFLHYKMQEKAQSLAIIERFLKLHPTSPAADYAYYLQGLINFNDDLGLFGS 152

Query: 144 MIRD--VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
           +++      DQ+A++   Q   ++V+RY +S Y   AR  +    N LAA EV + RYY 
Sbjct: 153 IVKTDLAERDQQASRDAYQSFKQLVDRYPDSRYAPDARLRINYIINALAAHEVHVARYYY 212

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +RG YVA+  R Q  + ++     AEEA+  +  +Y  L +     +   ++Q  YP+  
Sbjct: 213 QRGAYVASANRAQQAVQDFRGVPAAEEALYLMAASYHQLGMAPLRDDAWRVLQNNYPKSR 272

Query: 262 W 262
           W
Sbjct: 273 W 273


>gi|309378793|emb|CBX22619.1| competence lipoprotein ComL [Neisseria lactamica Y92-1009]
          Length = 268

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 115/251 (45%), Gaps = 13/251 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K  L +  S+A+C     +    +D        V    ++Y +A   L   N+++A +
Sbjct: 1   MKKILLMVSLSLALCACASSQGTVDKDTQTTQGWGVE---KLYAEAQDELGGGNYTRAVK 57

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            +      FP    A+++LL +A+  Y   +  +A +  + +   YP+  N+DY  YL G
Sbjct: 58  LYEILGSRFPTGRYAQQALLDTAYAYYKDDEKDKALAAIDRFRNLYPQHPNMDYALYLRG 117

Query: 139 M-------SYAQMIRDVPY---DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +       S+   +    +   D +A +   Q  + +V R+ +S Y   A   +    + 
Sbjct: 118 LVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVRRFPDSKYAADASARMIKLVDA 177

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           L   E+ + RYY+KRG Y+AA  R Q ++ +Y +  + EE++A L  AY  L     A +
Sbjct: 178 LGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESLAILELAYQKLGKPQLAAD 237

Query: 249 VVSLIQERYPQ 259
              +++  +P+
Sbjct: 238 TRRVLETNFPK 248


>gi|121634500|ref|YP_974745.1| competence lipoprotein [Neisseria meningitidis FAM18]
 gi|218767825|ref|YP_002342337.1| competence lipoprotein [Neisseria meningitidis Z2491]
 gi|254804586|ref|YP_003082807.1| DNA uptake lipoprotein [Neisseria meningitidis alpha14]
 gi|18203141|sp|Q9JVB7|COML_NEIMA RecName: Full=Competence lipoprotein ComL; Flags: Precursor
 gi|120866206|emb|CAM09946.1| competence lipoprotein [Neisseria meningitidis FAM18]
 gi|121051833|emb|CAM08139.1| competence lipoprotein [Neisseria meningitidis Z2491]
 gi|254668129|emb|CBA04725.1| DNA uptake lipoprotein [Neisseria meningitidis alpha14]
 gi|254670507|emb|CBA06261.1| competence lipoprotein ComL [Neisseria meningitidis alpha153]
 gi|261392925|emb|CAX50510.1| competence lipoprotein ComL [Neisseria meningitidis 8013]
 gi|308388891|gb|ADO31211.1| competence lipoprotein [Neisseria meningitidis alpha710]
 gi|319410075|emb|CBY90409.1| competence lipoprotein ComL [Neisseria meningitidis WUE 2594]
 gi|325131844|gb|EGC54544.1| competence lipoprotein comL [Neisseria meningitidis M6190]
 gi|325136075|gb|EGC58685.1| competence lipoprotein comL [Neisseria meningitidis M0579]
 gi|325137894|gb|EGC60469.1| competence lipoprotein comL [Neisseria meningitidis ES14902]
 gi|325139919|gb|EGC62449.1| competence lipoprotein comL [Neisseria meningitidis CU385]
 gi|325141925|gb|EGC64365.1| competence lipoprotein comL [Neisseria meningitidis 961-5945]
 gi|325197922|gb|ADY93378.1| competence lipoprotein comL [Neisseria meningitidis G2136]
 gi|325202502|gb|ADY97956.1| competence lipoprotein comL [Neisseria meningitidis M01-240149]
 gi|325207747|gb|ADZ03199.1| competence lipoprotein comL [Neisseria meningitidis NZ-05/33]
          Length = 267

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 103/212 (48%), Gaps = 10/212 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L   N+++A + +      FP +  AR+S L +A+  Y   +  +A +  E
Sbjct: 37  KLYAEAQDELNSSNYTRAVKLYEILESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIE 96

Query: 119 EYITQYPESKNVDYVYYLVGM-------SYAQMIRDVPY---DQRATKLMLQYMSRIVER 168
            +   +P+  N+DY  YL G+       S+   +    +   D +A +   Q  + +V+R
Sbjct: 97  RFRRLHPQHPNMDYALYLRGLVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQR 156

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           + NS Y   A   +    + L   E+ + RYY+KRG Y+AA  R Q ++ +Y +  + EE
Sbjct: 157 FPNSKYAADATARMVKLVDALGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEE 216

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           ++A L  AY  L     A +   +++  +P+ 
Sbjct: 217 SLAILELAYQKLGKPQLAADTRRVLETNFPKS 248


>gi|170723709|ref|YP_001751397.1| competence lipoprotein ComL [Pseudomonas putida W619]
 gi|169761712|gb|ACA75028.1| competence lipoprotein ComL [Pseudomonas putida W619]
          Length = 339

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 10/210 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y++A   L   +++ A          +PF   A ++ L   +  Y   + + A S  E
Sbjct: 33  ELYQQAQADLDNSSYNSAVNKLKALESRYPFGRYADQAQLELIYANYKNSEPEAAKSAAE 92

Query: 119 EYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR-----ATKLMLQYMSRIVER 168
            +I  +P+  NVDY YYL G+ S+ Q    + R +P D       A +      +++  R
Sbjct: 93  RFIRLHPQHPNVDYAYYLKGLTSFDQDRGLVARFLPLDMTKRDPGAARDSYNEFAQLTSR 152

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           + NS Y   A+  +   RN LA+ E+ +  YYL R  YVAA  R + V+ N+ +     +
Sbjct: 153 FPNSRYAPDAKQRMIYLRNLLASYEIHVADYYLSRQAYVAAANRGRYVVENFQETPSVGD 212

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYP 258
            +A +VEAY  + L D A   +  ++  YP
Sbjct: 213 GLAVMVEAYQKMHLDDLAATSLETLKLNYP 242


>gi|74316827|ref|YP_314567.1| putative competence lipoprotein [Thiobacillus denitrificans ATCC
           25259]
 gi|74056322|gb|AAZ96762.1| putative competence lipoprotein precursor [Thiobacillus
           denitrificans ATCC 25259]
          Length = 281

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 101/220 (45%), Gaps = 19/220 (8%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +++Y +A   L E N+ +A + F      +PF   A+++ L  A+  Y   +   A +  
Sbjct: 52  QKLYAEAKDNLNEGNYERAVKLFETLESRYPFGRYAQQAQLEVAYAYYKDNEPISAVAAC 111

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY------------DQRATKLMLQYMSRI 165
           + +I  +P   NVDY YYL G+  A    D+              D RA +        +
Sbjct: 112 DRFIKLHPNHPNVDYAYYLKGL--ANFNDDLGLLGNLVDQDMSERDPRAARDAFLAFKEL 169

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
             R+  S Y   A   +    N LA  EV + +YYLKR  YVAA  R + VL  Y +A  
Sbjct: 170 ATRFPQSIYAADATARMKYLVNALANNEVHVAKYYLKRKAYVAAANRAKEVLKTYPEAPA 229

Query: 226 AEEAMARLVEAYVALA---LMDEAREVVSL--IQERYPQG 260
            EEA+A +  +Y  L    L D+AR V++L     +Y QG
Sbjct: 230 LEEALAIMALSYDRLKLPELRDDARRVLTLNFPNSKYLQG 269


>gi|297182617|gb|ADI18776.1| DNA uptake lipoprotein [uncultured gamma proteobacterium
           HF4000_36I10]
          Length = 310

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 109/213 (51%), Gaps = 10/213 (4%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           ++++Y +A   L+  N+S A +        FPF   A ++ L   +  Y + + + A + 
Sbjct: 31  EKQIYNQAQEHLENGNYSLAVKNLQLLESRFPFGPYAEQAQLEIIYAHYRSLEPEAAIAA 90

Query: 117 GEEYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYD--QRATKLMLQYMS---RIV 166
            + +I  +P+  +VDY YY+ G+ +Y +    + R  P D  QR     +Q      +++
Sbjct: 91  ADRFIRLHPQHPSVDYAYYMRGLANYTEGQGLLERFFPTDMSQRDPGAAVQAFEDFRQLL 150

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
           +R+ +S Y   AR  +   RN+LA  E+ +  YY KR  Y+AA  R + V+ N       
Sbjct: 151 QRFPDSQYAPDARARMIHLRNRLARYEINVANYYFKRKAYLAAANRGRYVVENMPQTSAV 210

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            +A+A +V+AY+ L + D A   +++++  +P+
Sbjct: 211 PDALAVMVQAYLLLGMDDLADRSLTVLRSNFPK 243


>gi|254673629|emb|CBA09175.1| competence lipoprotein ComL [Neisseria meningitidis alpha275]
          Length = 267

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 103/212 (48%), Gaps = 10/212 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L   N+++A + +      FP +  AR+S L +A+  Y   +  +A +  E
Sbjct: 37  KLYAEAQDELNSSNYTRAVKLYEILESRFPTSLHARQSQLDTAYAYYKDDEKDKALAAIE 96

Query: 119 EYITQYPESKNVDYVYYLVGM-------SYAQMIRDVPY---DQRATKLMLQYMSRIVER 168
            +   +P+  N+DY  YL G+       S+   +    +   D +A +   Q  + +V+R
Sbjct: 97  RFRRLHPQHPNMDYALYLRGLVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQR 156

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           + NS Y   A   +    + L   E+ + RYY+KRG Y+AA  R Q ++ +Y +  + EE
Sbjct: 157 FPNSKYAADATVRMVKLVDALGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEE 216

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           ++A L  AY  L     A +   +++  +P+ 
Sbjct: 217 SLAILELAYQKLGKPQLAADTRRVLETNFPKS 248


>gi|325129837|gb|EGC52644.1| competence lipoprotein comL [Neisseria meningitidis OX99.30304]
          Length = 256

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 103/212 (48%), Gaps = 10/212 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L   N+++A + +      FP +  AR+S L +A+  Y   +  +A +  E
Sbjct: 26  KLYAEAQDELNSSNYTRAVKLYEILESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIE 85

Query: 119 EYITQYPESKNVDYVYYLVGM-------SYAQMIRDVPY---DQRATKLMLQYMSRIVER 168
            +   +P+  N+DY  YL G+       S+   +    +   D +A +   Q  + +V+R
Sbjct: 86  RFRRLHPQHPNMDYALYLRGLVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQR 145

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           + NS Y   A   +    + L   E+ + RYY+KRG Y+AA  R Q ++ +Y +  + EE
Sbjct: 146 FPNSKYAADATARMVKLVDALGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEE 205

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           ++A L  AY  L     A +   +++  +P+ 
Sbjct: 206 SLAILELAYQKLGKPQLAADTRRVLETNFPKS 237


>gi|238921073|ref|YP_002934588.1| outer membrane protein assembly complex subunit YfiO [Edwardsiella
           ictaluri 93-146]
 gi|238870642|gb|ACR70353.1| competence lipoprotein ComL [Edwardsiella ictaluri 93-146]
          Length = 245

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 109/245 (44%), Gaps = 30/245 (12%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           A T+  ++A C        SS++   D+        E+Y  A   L++ NF  A      
Sbjct: 10  ATTLSLALAGC-------SSSKEAVPDNPP-----AEIYATAQQKLQDGNFKAAITQLEA 57

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
               +PF   +++  L   +  Y +     A +  + +I   P S+N+ YV Y+ G++  
Sbjct: 58  LDNRYPFGPYSQQVQLDLIYAYYKSADLPMAQATIDRFIRLNPTSQNMSYVLYMRGLTDM 117

Query: 143 QMI--------------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
            M               RD  Y ++A     +  S++V+RY NS Y   A   +   +N+
Sbjct: 118 AMDDSALQGFFGIDRSDRDPEYARQA----FRDFSQLVQRYPNSAYTTDATKRLVFLKNR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E+ + R+Y KRG YVA + R + +L NY D +    A+  +  AY  + L  EA +
Sbjct: 174 LAKHELAVARFYTKRGAYVAVVNRVEQMLRNYPDTQATRGALPLMENAYRQMGLNGEADK 233

Query: 249 VVSLI 253
           V  +I
Sbjct: 234 VQKII 238


>gi|313668817|ref|YP_004049101.1| competence lipoprotein [Neisseria lactamica ST-640]
 gi|313006279|emb|CBN87742.1| competence lipoprotein [Neisseria lactamica 020-06]
          Length = 268

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 115/251 (45%), Gaps = 13/251 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K  L +  S+A+C     +    +D        V    ++Y +A   L   N+++A +
Sbjct: 1   MKKILLMVSLSLALCACASSQGTVDKDTQTTQGWGVE---KLYAEAQDELGGGNYTRAVK 57

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            +      FP    A+++LL +A+  Y   +  +A +  + +   YP+  N+DY  YL G
Sbjct: 58  LYEILGSRFPTGRYAQQALLDTAYAYYKDDEKDKALAAIDRFRNLYPQHPNMDYALYLRG 117

Query: 139 M-------SYAQMIRDVPY---DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +       S+   +    +   D +A +   Q  + +V R+ +S Y   A   +    + 
Sbjct: 118 LVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVRRFPDSKYAADASARMIKLVDA 177

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           L   E+ + RYY+KRG Y+AA  R Q ++ +Y +  + EE++A L  AY  L     A +
Sbjct: 178 LGGNEMAVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESLAILELAYQKLGKPQLAAD 237

Query: 249 VVSLIQERYPQ 259
              +++  +P+
Sbjct: 238 TRRVLETNFPK 248


>gi|319638103|ref|ZP_07992867.1| competence lipoprotein comL [Neisseria mucosa C102]
 gi|317400748|gb|EFV81405.1| competence lipoprotein comL [Neisseria mucosa C102]
          Length = 267

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 102/212 (48%), Gaps = 10/212 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L   N+++A + +      FP    A++S L +A+  Y   + ++A +   
Sbjct: 37  KLYAEAQDELNSNNYTRAVKLYEILESRFPNGRYAQQSQLDTAYAYYKDDEPEKALAAIA 96

Query: 119 EYITQYPESKNVDYVYYLVGM-------SYAQMIRDVPY---DQRATKLMLQYMSRIVER 168
            +   +P+  N+DY  YL G+       S+   +    +   D +A +   Q  + +V+R
Sbjct: 97  RFQRHHPQHPNMDYALYLKGLVLFNEDQSFLNKLASQDWSDRDPKANRDAYQAFAELVQR 156

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS Y   A   +    + L   E+ + RYY+KRG YVAA  R Q +++ Y +  + EE
Sbjct: 157 YPNSKYAADATERMAKLVDALGGNEMSVARYYMKRGAYVAAANRAQKIVSRYQNTRYVEE 216

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           A+A +  AY  L     A +   +++  +PQ 
Sbjct: 217 ALAMMELAYKKLDKPQLAADTHRVLETNFPQS 248


>gi|261400384|ref|ZP_05986509.1| competence lipoprotein ComL [Neisseria lactamica ATCC 23970]
 gi|269209821|gb|EEZ76276.1| competence lipoprotein ComL [Neisseria lactamica ATCC 23970]
          Length = 268

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 115/251 (45%), Gaps = 13/251 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K  L +  S+A+C     +    +D        V    ++Y +A   L   N+++A +
Sbjct: 1   MKKILLMVSLSLALCACASSQGTVDKDTQTTQGWGVE---KLYAEAQDELGGGNYTRAVK 57

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            +      FP    A+++LL +A+  Y   +  +A +  + +   YP+  N+DY  YL G
Sbjct: 58  LYEILGSRFPTGRYAQQALLDTAYAYYKDDEKDKALAAIDRFRNLYPQHPNMDYALYLRG 117

Query: 139 M-------SYAQMIRDVPY---DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +       S+   +    +   D +A +   Q  + +V R+ +S Y   A   +    + 
Sbjct: 118 LVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVRRFPDSKYAADASARMIKLVDA 177

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           L   E+ + RYY+KRG Y+AA  R Q ++ +Y +  + EE++A L  AY  L     A +
Sbjct: 178 LGGNEMAVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESLAILELAYQKLGKPQLAAD 237

Query: 249 VVSLIQERYPQ 259
              +++  +P+
Sbjct: 238 TRRVLETNFPK 248


>gi|261380319|ref|ZP_05984892.1| competence lipoprotein ComL [Neisseria subflava NJ9703]
 gi|284796837|gb|EFC52184.1| competence lipoprotein ComL [Neisseria subflava NJ9703]
          Length = 267

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 102/212 (48%), Gaps = 10/212 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L   N+++A + +      FP    A++S L +A+  Y   + ++A +   
Sbjct: 37  KLYAEAQDELNSNNYTRAVKLYEILESRFPNGRYAQQSQLDTAYAYYKDDEPEKALAAIA 96

Query: 119 EYITQYPESKNVDYVYYLVGM-------SYAQMIRDVPY---DQRATKLMLQYMSRIVER 168
            +   +P+  N+DY  YL G+       S+   +    +   D +A +   Q  + +V+R
Sbjct: 97  RFQRHHPQHPNMDYALYLKGLVLFNEDQSFLNKLASQDWSDRDPKANRDAYQAFAELVQR 156

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS Y   A   +    + L   E+ + RYY+KRG YVAA  R Q +++ Y +  + EE
Sbjct: 157 YPNSKYAADATERMAKLVDALGGNEMSVARYYMKRGAYVAAANRAQKIVSRYQNTRYVEE 216

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           A+A +  AY  L     A +   +++  +PQ 
Sbjct: 217 ALAMMELAYKKLDKPQLAADTRRVLETNFPQS 248


>gi|45403|emb|CAA78141.1| putative protein of no known function [Pseudomonas aeruginosa PAO1]
          Length = 341

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 105/222 (47%), Gaps = 10/222 (4%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           ++V +   + ++Y++A   L  ++++ A          +PF   A ++ L   +  Y   
Sbjct: 23  ETVDENLSESQLYQQAQDDLNNKSYNSAVTKLKALESRYPFGRYAEQAQLELIYANYKNM 82

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSY-----AQMIRDVPYDQR-----ATKLM 158
           + + A +  E +I  +P+  NVDY YYL G+S        + R +P D       A +  
Sbjct: 83  EPEAARAAAERFIRLHPQHPNVDYAYYLKGLSSFDQDRGLLARFLPLDMTKRDPGAARDS 142

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
               +++  R  NS Y   A+  +   RN LAA EV +G YYLKR  YVAA  R + V+ 
Sbjct: 143 FNEFAQLTSRLPNSRYAPDAKARMVYLRNLLAAYEVHVGHYYLKRQAYVAAANRGRYVVE 202

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           N+ +     + +A +VEAY  L L D A   +  ++  YP  
Sbjct: 203 NFQETPAVGDGLAIMVEAYRRLGLDDLASTSLETLKLNYPDN 244


>gi|115314565|ref|YP_763288.1| hypothetical protein FTH_0702 [Francisella tularensis subsp.
           holarctica OSU18]
 gi|115129464|gb|ABI82651.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica OSU18]
          Length = 274

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 10/211 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y KA   ++ Q +  A   +      +PF  +A K ++   +V Y   +   A +LG++
Sbjct: 40  IYAKAHEQMQNQKYFDAIRSYKSLVAQYPFTSLAEKGMVDLIYVYYMDDESTMALALGQQ 99

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDV-----PYD---QRATKLMLQYMS--RIVERY 169
           +I  YP S    YVYY++G+   +  R +     PYD      T     Y +  + ++  
Sbjct: 100 FIKMYPYSIYKGYVYYMIGVVGFEDGRGMLQTYAPYDMNYHDPTGYQDAYTNFEKAIQLD 159

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
            N  +V  A+  +    N +A    +I  +Y KRG Y AAI R   V+ NY  +   E+A
Sbjct: 160 PNGSFVPDAKRRMVFINNIIARHYDDIAHFYFKRGAYNAAIDRASQVIRNYPQSTSTEDA 219

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260
           +   + AY  L L D+A+  + ++++ YP+ 
Sbjct: 220 LVLTIRAYNKLGLYDQAKANIRVLKKNYPKN 250


>gi|323697686|ref|ZP_08109598.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio sp. ND132]
 gi|323457618|gb|EGB13483.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio
           desulfuricans ND132]
          Length = 242

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 110/247 (44%), Gaps = 20/247 (8%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           + +  S+A C  +          +L    D    +E+YE  V  + E+++  A +YF++ 
Sbjct: 10  IVVLLSLAGCMWID-------SYFLPPPEDT--AQELYEAGVAAMDEKDYGDAQDYFSKL 60

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              FPF+  + K  L      +    Y  A    +E+   +P ++N+ YV Y +  +   
Sbjct: 61  KDRFPFSPYSLKGELALGDAYFLDEDYVHALDAYKEFEALHPSNENIPYVLYQIANTDVS 120

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
           M R +   Q   K  L+Y+ R+VE Y  S Y + A+  +   R  LA  EV +  ++ + 
Sbjct: 121 MFRTIDRRQENVKEGLEYLYRLVETYPKSQYAEAAKEMILKSRRILAEHEVFVADFFWRT 180

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEE-AMARLVEAYVAL--ALMDEAREVVSLIQERYPQG 260
            +Y  A  R+Q V+ N+SD     + AM R   +Y      L +E RE +        QG
Sbjct: 181 EQYGPAWHRYQYVVENFSDIPDLRDYAMKRAEYSYFEYQKTLSEEERERI--------QG 232

Query: 261 YWARYVE 267
            W  +++
Sbjct: 233 SWKLWLK 239


>gi|190150448|ref|YP_001968973.1| lipoprotein [Actinobacillus pleuropneumoniae serovar 7 str. AP76]
 gi|307263792|ref|ZP_07545398.1| hypothetical protein appser13_12030 [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|189915579|gb|ACE61831.1| putative lipoprotein [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|306870913|gb|EFN02651.1| hypothetical protein appser13_12030 [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 258

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/224 (25%), Positives = 114/224 (50%), Gaps = 14/224 (6%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +++Y K   +L++ +++ A  Y +          +  ++ L   F  Y  G+Y +A    
Sbjct: 33  QDLYTKGQTYLQDGDYNSAIRYLDAIGAKGGQGTLGEQTQLSLIFANYKIGEYYKALDAA 92

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQM----IRDVPYDQRATKLMLQYMS------RIVE 167
           E ++  YP S ++DYVYYL G+S A++    I+D     RA++ +    +       IV+
Sbjct: 93  ERFVRAYPNSASMDYVYYLAGLSNARLGDNFIQDFFGVNRASRALDSVRNAYGSFQTIVQ 152

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y  S Y + A+ ++    N++A  E+ I ++Y +R  YVA + R + ++  Y +++   
Sbjct: 153 HYPQSQYARDAQNWMAYLINRMAEHELSIVKFYDEREAYVAVVNRVEEMMRFYPESKPTY 212

Query: 228 EAMARLVEAYVALALMDEAREVVSLIQ----ERYPQGYWARYVE 267
           +A++ + +AY  + + D A +V +LI+    + +P+     Y E
Sbjct: 213 QALSYMQKAYEQMGVKDSAEKVAALIEANKDKNFPEAIKPEYSE 256


>gi|152980898|ref|YP_001353082.1| competence lipoprotein ComL [Janthinobacterium sp. Marseille]
 gi|151280975|gb|ABR89385.1| competence lipoprotein ComL [Janthinobacterium sp. Marseille]
          Length = 261

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 99/216 (45%), Gaps = 10/216 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   +   +++KA  +F +    +PF   A+++ +  A+  Y  G   QA +  E
Sbjct: 33  KLYSEAREEMNVGDYAKAVSHFEKLESRYPFGTYAQQAQMEIAYAYYRQGDQPQALAAVE 92

Query: 119 EYITQYPESKNVDYVYYLVGM----------SYAQMIRDVPYDQRATKLMLQYMSRIVER 168
            +I  +P+  NVDY+YYL G+           +         D +A +        + ER
Sbjct: 93  RFIKLHPDHPNVDYMYYLRGLINFNDKVSIFDFVSRQDPTERDPKAAREAFDSFKLLTER 152

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           + +S Y   A   +    N +A  +V +  YY +RG Y+AA+ R Q  + NY  A   E 
Sbjct: 153 FPDSKYTPDATARLAYLVNGMAQYDVHVANYYYRRGAYLAAVNRAQSAVKNYPGAPAVEG 212

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
           A+  ++ +Y AL L     +   +++  +P   + R
Sbjct: 213 ALYVMIRSYDALNLPQLRDDAERVMKTNFPDSVYFR 248


>gi|301629104|ref|XP_002943688.1| PREDICTED: hypothetical protein LOC100490343 [Xenopus (Silurana)
           tropicalis]
          Length = 475

 Score = 79.7 bits (195), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 115/254 (45%), Gaps = 16/254 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +  L +F ++    L+     +S D   +   D     ++Y +A   +    + KA  
Sbjct: 211 MLRAPLPLFSALLAAGLIAGCASTSEDKTANWSPD-----KIYSEAREEMNSGAYDKAVP 265

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
              +         +A+++ L  A+ Q+  G+  QA +  E ++  +P S  +DY  YL G
Sbjct: 266 LLEKLEGRAAGTPLAQQAQLDKAYAQFKNGEKAQAIATLERFLKLHPASPAIDYALYLRG 325

Query: 139 M----------SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +          S+         DQ+A K   +    +  R+ +S Y   AR  +T   N 
Sbjct: 326 LVNFNDNLGIFSWLSRQDLSERDQKAAKDSFESFRDLTTRFPDSRYAPDARQRMTYIVNA 385

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  EV + RYY +RG YVAA+ R Q  +++Y +   AEEA+  L+ +Y AL +     +
Sbjct: 386 LAQYEVHVARYYYERGAYVAAVGRAQQAISDYQNVPAAEEALYILIRSYDALGMAQLRDD 445

Query: 249 VVSLIQERYPQ-GY 261
            + ++   YP+ GY
Sbjct: 446 TMRVMNASYPESGY 459


>gi|212212776|ref|YP_002303712.1| lipoprotein, ComL family [Coxiella burnetii CbuG_Q212]
 gi|212011186|gb|ACJ18567.1| lipoprotein, ComL family [Coxiella burnetii CbuG_Q212]
          Length = 272

 Score = 79.7 bits (195), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 10/216 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E++      L ++++S+A + F      +PF   A ++ L   +  Y       A +  +
Sbjct: 52  ELFTSGERALAKKDYSEAVKNFEALDAIYPFGPHAEQAQLDIIYAYYKNNDTSSAIAAAD 111

Query: 119 EYITQYPESKNVDYVYYL-------VGMSYAQ-MIRDVPYDQRATKLMLQYMS--RIVER 168
            YI  YP  +NVDY YY+       +G+S+ Q + R  P  +  + L   + S   + E 
Sbjct: 112 RYIWLYPRGRNVDYAYYMRGVIGFDLGLSWLQKLARVSPVSRDISTLQQSFTSFATLAEV 171

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           + +S Y   A   +   RN +A +E+ I  +Y+KR  YVAA  R   V+ ++  +    +
Sbjct: 172 FPHSRYTPDALTRMRYIRNLMAQREIMIAEFYMKRRAYVAAANRGSYVVQHFQGSPQVAK 231

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
           A+A +V+AY AL L   A     L+Q  YP    AR
Sbjct: 232 ALAIMVQAYRALGLPKMADVSNHLLQTNYPHTLEAR 267


>gi|56708306|ref|YP_170202.1| lipoprotein [Francisella tularensis subsp. tularensis SCHU S4]
 gi|89256089|ref|YP_513451.1| lipoprotein [Francisella tularensis subsp. holarctica LVS]
 gi|110670777|ref|YP_667334.1| lipoprotein [Francisella tularensis subsp. tularensis FSC198]
 gi|118497848|ref|YP_898898.1| competence lipoprotein ComL [Francisella tularensis subsp. novicida
           U112]
 gi|167010774|ref|ZP_02275705.1| competence lipoprotein ComL [Francisella tularensis subsp.
           holarctica FSC200]
 gi|169656566|ref|YP_001428171.2| lipoprotein [Francisella tularensis subsp. holarctica FTNF002-00]
 gi|187931811|ref|YP_001891796.1| competence lipoprotein ComL [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|224457426|ref|ZP_03665899.1| competence lipoprotein ComL [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254367417|ref|ZP_04983443.1| conserved hypothetical lipoprotein [Francisella tularensis subsp.
           holarctica 257]
 gi|254369096|ref|ZP_04985108.1| hypothetical protein FTAG_00025 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|254370789|ref|ZP_04986794.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254373203|ref|ZP_04988692.1| conserved hypothetical protein [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|254374658|ref|ZP_04990139.1| conserved hypothetical protein [Francisella novicida GA99-3548]
 gi|254875127|ref|ZP_05247837.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|290954526|ref|ZP_06559147.1| competence lipoprotein ComL [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295312042|ref|ZP_06802857.1| competence lipoprotein ComL [Francisella tularensis subsp.
           holarctica URFT1]
 gi|56604798|emb|CAG45877.1| conserved hypothetical lipoprotein [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|89143920|emb|CAJ79139.1| conserved hypothetical lipoprotein [Francisella tularensis subsp.
           holarctica LVS]
 gi|110321110|emb|CAL09260.1| conserved hypothetical lipoprotein [Francisella tularensis subsp.
           tularensis FSC198]
 gi|118423754|gb|ABK90144.1| competence lipoprotein ComL [Francisella novicida U112]
 gi|134253233|gb|EBA52327.1| conserved hypothetical lipoprotein [Francisella tularensis subsp.
           holarctica 257]
 gi|151569032|gb|EDN34686.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis FSC033]
 gi|151570930|gb|EDN36584.1| conserved hypothetical protein [Francisella novicida GA99-3549]
 gi|151572377|gb|EDN38031.1| conserved hypothetical protein [Francisella novicida GA99-3548]
 gi|157122046|gb|EDO66186.1| hypothetical protein FTAG_00025 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|164551634|gb|ABU61215.2| lipoprotein with TPR domain [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|187712720|gb|ACD31017.1| competence lipoprotein ComL [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|254841126|gb|EET19562.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|282159537|gb|ADA78928.1| lipoprotein with TPR domain [Francisella tularensis subsp.
           tularensis NE061598]
 gi|332678563|gb|AEE87692.1| Putative component of the lipoprotein assembly complex (forms a
           complex with YaeT, YfgL, and NlpB) [Francisella cf.
           novicida Fx1]
          Length = 274

 Score = 79.7 bits (195), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 10/211 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y KA   ++ Q +  A   +      +PF  +A K ++   +V Y   +   A +LG++
Sbjct: 40  IYAKAHEQMQNQKYFDAIRSYKSLVAQYPFTPLAEKGMVDLIYVYYMDDESTMALALGQQ 99

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDV-----PYD---QRATKLMLQYMS--RIVERY 169
           +I  YP S    YVYY++G+   +  R +     PYD      T     Y +  + ++  
Sbjct: 100 FIKMYPYSIYKGYVYYMIGVVGFEDGRGMLQTYAPYDMNYHDPTGYQDAYTNFEKAIQLD 159

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
            N  +V  A+  +    N +A    +I  +Y KRG Y AAI R   V+ NY  +   E+A
Sbjct: 160 PNGSFVPDAKRRMVFINNIIARHYDDIAHFYFKRGAYNAAIDRASQVIRNYPQSTSTEDA 219

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260
           +   + AY  L L D+A+  + ++++ YP+ 
Sbjct: 220 LVLTIRAYNKLGLYDQAKANIRVLKKNYPKN 250


>gi|307824792|ref|ZP_07655015.1| outer membrane assembly lipoprotein YfiO [Methylobacter
           tundripaludum SV96]
 gi|307734150|gb|EFO05004.1| outer membrane assembly lipoprotein YfiO [Methylobacter
           tundripaludum SV96]
          Length = 279

 Score = 79.7 bits (195), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 95/203 (46%), Gaps = 10/203 (4%)

Query: 68  LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
           L   N+ KA + +      +PF   + ++ L  A+  Y     + A +  + +I   P S
Sbjct: 54  LDAGNYDKAIKLYEALESRYPFGDESAQTQLDIAYAYYKNSDPEAAIAAADRFIKINPRS 113

Query: 128 KNVDYVYYLVGM-SYAQMI----RDVPYD--QR---ATKLMLQYMSRIVERYTNSPYVKG 177
            +VDY YYL G+ +Y + I    R +P D  QR     +      + +  R+ NS Y+  
Sbjct: 114 SSVDYAYYLKGLVNYNRGIGFIDRFLPTDTSQRDPGTARDAYDNFAELTRRFPNSKYIAD 173

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           A+  +   +N LA  EV + R+Y+KR  YVAAI R   V+  Y        A+  + EAY
Sbjct: 174 AQQRMIELKNNLAMYEVHVARFYMKRKAYVAAINRASTVVDKYQRTPAVPYALQIMQEAY 233

Query: 238 VALALMDEAREVVSLIQERYPQG 260
             L L D A++   + +  YP G
Sbjct: 234 TKLELPDLAKDTTRVYELNYPNG 256


>gi|221067307|ref|ZP_03543412.1| outer membrane assembly lipoprotein YfiO [Comamonas testosteroni
           KF-1]
 gi|220712330|gb|EED67698.1| outer membrane assembly lipoprotein YfiO [Comamonas testosteroni
           KF-1]
          Length = 271

 Score = 79.7 bits (195), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 91/191 (47%), Gaps = 13/191 (6%)

Query: 73  FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
           + KA   F +         +A+++ L  A+ QY AG+  QA +  + +   +P S  +DY
Sbjct: 58  YDKAVPLFEKLEGRAAGTPLAQQAQLEKAYAQYKAGEKVQALATLDRFTKLHPASPAMDY 117

Query: 133 VYYLVGM--------SYAQMIRD--VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
             YL G+         +  + R      DQ+A K   +    +V R+ +S Y   AR  +
Sbjct: 118 ALYLKGLVNFNDNLGMFGWLTRQDLSERDQKAAKDSFESFRELVTRFPDSKYSDDARQRM 177

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA- 241
               N LA  EV + RYY  RG YVAAI R Q  + +Y +     EAM  LV++Y AL  
Sbjct: 178 QYIVNSLAQYEVHVARYYYSRGAYVAAIARAQTAIKDYQNVPSVREAMVILVKSYDALGM 237

Query: 242 --LMDEAREVV 250
             L D+A+ V+
Sbjct: 238 TQLRDDAKRVL 248


>gi|330811804|ref|YP_004356266.1| DNA uptake lipoprotein (ComL) [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327379912|gb|AEA71262.1| Putative DNA uptake lipoprotein (ComL) [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 338

 Score = 79.3 bits (194), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 110/227 (48%), Gaps = 14/227 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           SS++V  +++++V    E+Y++A   L   +++ A          +PF   A ++ L   
Sbjct: 19  SSKEVVDENLSEV----ELYQQAQNDLDNNSYTSATAKLKALESRYPFGRYADQAQLELI 74

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR--- 153
           +  Y   + + A S  E +I  +P+  NVDY YYL G+ S+ Q    + R +P D     
Sbjct: 75  YANYKNAEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQDVGLLARFLPLDMTKRD 134

Query: 154 --ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
             A +      +++  R+ NS Y   A+  +   RN LA+ E+ +  YYL R  YVAA  
Sbjct: 135 PGAARDSYNEFAQLTSRFPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAAN 194

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           R + V+ N+ +     + +A + EAY  L L + A   +  ++  YP
Sbjct: 195 RGRYVVENFQETPSVGDGLAVMTEAYQRLHLDELAATSLETLKLNYP 241


>gi|194323821|ref|ZP_03057597.1| tetratricopeptide repeat domain protein [Francisella tularensis
           subsp. novicida FTE]
 gi|208779912|ref|ZP_03247256.1| tetratricopeptide repeat domain protein [Francisella novicida FTG]
 gi|194322185|gb|EDX19667.1| tetratricopeptide repeat domain protein [Francisella tularensis
           subsp. novicida FTE]
 gi|208744367|gb|EDZ90667.1| tetratricopeptide repeat domain protein [Francisella novicida FTG]
          Length = 262

 Score = 79.3 bits (194), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 10/211 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y KA   ++ Q +  A   +      +PF  +A K ++   +V Y   +   A +LG++
Sbjct: 28  IYAKAHEQMQNQKYFDAIRSYKSLVAQYPFTPLAEKGMVDLIYVYYMDDESTMALALGQQ 87

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDV-----PYD---QRATKLMLQYMS--RIVERY 169
           +I  YP S    YVYY++G+   +  R +     PYD      T     Y +  + ++  
Sbjct: 88  FIKMYPYSIYKGYVYYMIGVVGFEDGRGMLQTYAPYDMNYHDPTGYQDAYTNFEKAIQLD 147

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
            N  +V  A+  +    N +A    +I  +Y KRG Y AAI R   V+ NY  +   E+A
Sbjct: 148 PNGSFVPDAKRRMVFINNIIARHYDDIAHFYFKRGAYNAAIDRASQVIRNYPQSTSTEDA 207

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260
           +   + AY  L L D+A+  + ++++ YP+ 
Sbjct: 208 LVLTIRAYNKLGLYDQAKANIRVLKKNYPKN 238


>gi|220933993|ref|YP_002512892.1| putative competence lipoprotein precursor [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219995303|gb|ACL71905.1| putative competence lipoprotein precursor [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 254

 Score = 79.3 bits (194), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 10/211 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L   NF +A  Y+      FPF+  A+++ L  A+  + A + + A +  +
Sbjct: 36  QLYTEARAALDRGNFDQAVSYYESLEARFPFSRFAQQAQLEVAYAYHKADEPEMALAAAD 95

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQ-----MIRDVPYDQRAT-----KLMLQYMSRIVER 168
            +I   P    VDY YYL G+  A      + R  P D  +      +      S +V  
Sbjct: 96  RFIQINPRHPYVDYAYYLKGLVNANRGQGYLQRWFPRDPSSRNPAHLRQAFDDFSTLVGN 155

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           + +S Y + A   +   RN LAA E+ +  +Y++RG ++AA  R + V+  Y +A+   +
Sbjct: 156 FPDSRYAEDAHQRLIYLRNMLAAHELHVANFYMRRGAWLAAAQRARTVIERYPEADSNLD 215

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           A+  +V AY  L L D A + + ++    P+
Sbjct: 216 ALEVMVRAYRELELNDLANDALRVLTLNDPE 246


>gi|77461058|ref|YP_350565.1| competence lipoprotein ComL, putative [Pseudomonas fluorescens
           Pf0-1]
 gi|77385061|gb|ABA76574.1| putative lipoprotein [Pseudomonas fluorescens Pf0-1]
          Length = 338

 Score = 79.3 bits (194), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 14/228 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           SS++V  +++++     E+Y++A   L   +++ A          +PF   A ++ L   
Sbjct: 19  SSKEVVDENLSEA----ELYQQAQQDLDNNSYTSATAKLKALESRYPFGRYADQAQLELI 74

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR--- 153
           +  Y   + + A S  E +I  +P+  NVDY YYL G+ S+ Q    + R +P D     
Sbjct: 75  YANYKNAEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQDVGLLARFLPLDMTKRD 134

Query: 154 --ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
             A +      +++  RY NS Y   A+  +   RN LAA E+ +  YYL R  YVAA  
Sbjct: 135 PGAARDSYNEFAQLTSRYPNSRYAPDAKQRMIYLRNLLAAYEIHVADYYLTRQAYVAAAN 194

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           R + V+ N+ +     + +A + EAY  L L + A   +  ++  YP 
Sbjct: 195 RGRYVVENFQETPSVGDGLAVMTEAYQRLHLDELAATSLETLKLNYPN 242


>gi|32035196|ref|ZP_00135230.1| COG4105: DNA uptake lipoprotein [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126208591|ref|YP_001053816.1| putative lipoprotein [Actinobacillus pleuropneumoniae L20]
 gi|165976547|ref|YP_001652140.1| putative lipoprotein [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|303250130|ref|ZP_07336332.1| putative lipoprotein [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|303253304|ref|ZP_07339453.1| putative lipoprotein [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|307246036|ref|ZP_07528118.1| hypothetical protein appser1_12390 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307248144|ref|ZP_07530172.1| hypothetical protein appser2_11250 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|307250377|ref|ZP_07532325.1| hypothetical protein appser4_11570 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|307252759|ref|ZP_07534650.1| hypothetical protein appser6_12730 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307255018|ref|ZP_07536836.1| hypothetical protein appser9_12520 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307257174|ref|ZP_07538946.1| hypothetical protein appser10_11740 [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|307259454|ref|ZP_07541179.1| hypothetical protein appser11_12510 [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|307261603|ref|ZP_07543271.1| hypothetical protein appser12_11640 [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|126097383|gb|ABN74211.1| putative lipoprotein [Actinobacillus pleuropneumoniae serovar 5b
           str. L20]
 gi|165876648|gb|ABY69696.1| conserved putative lipoprotein [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|302647986|gb|EFL78193.1| putative lipoprotein [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|302651193|gb|EFL81347.1| putative lipoprotein [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306852971|gb|EFM85194.1| hypothetical protein appser1_12390 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306855321|gb|EFM87496.1| hypothetical protein appser2_11250 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306857587|gb|EFM89695.1| hypothetical protein appser4_11570 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306859791|gb|EFM91813.1| hypothetical protein appser6_12730 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306861891|gb|EFM93867.1| hypothetical protein appser9_12520 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306864336|gb|EFM96247.1| hypothetical protein appser10_11740 [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306866390|gb|EFM98253.1| hypothetical protein appser11_12510 [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306868726|gb|EFN00535.1| hypothetical protein appser12_11640 [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 258

 Score = 79.3 bits (194), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/224 (25%), Positives = 113/224 (50%), Gaps = 14/224 (6%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +++Y K   +L++ +++ A  Y +             ++ L   F  Y  G+Y +A    
Sbjct: 33  QDLYTKGQTYLQDGDYNSAIRYLDAIGAKGGQGTFGEQTQLSLIFANYKIGEYYKALDAA 92

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQM----IRDVPYDQRATKLMLQYMS------RIVE 167
           E ++  YP S ++DYVYYL G+S A++    I+D     RA++ +    +       IV+
Sbjct: 93  ERFVRAYPNSASMDYVYYLAGLSNARLGDNFIQDFFGVNRASRALDSVRNAYGSFQTIVQ 152

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y  S Y + A+ ++    N++A  E+ I ++Y +R  YVA + R + ++  Y +++   
Sbjct: 153 HYPQSQYARDAQNWMAYLINRMAEHELSIVKFYDEREAYVAVVNRVEEMMRFYPESKPTY 212

Query: 228 EAMARLVEAYVALALMDEAREVVSLIQ----ERYPQGYWARYVE 267
           +A++ + +AY  + + D A +V +LI+    + +P+     Y E
Sbjct: 213 QALSYMQKAYEQMGVKDSAEKVAALIEANKDKNFPEAIKPEYSE 256


>gi|312958893|ref|ZP_07773412.1| competence lipoprotein [Pseudomonas fluorescens WH6]
 gi|311286663|gb|EFQ65225.1| competence lipoprotein [Pseudomonas fluorescens WH6]
          Length = 341

 Score = 79.3 bits (194), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 113/245 (46%), Gaps = 21/245 (8%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           + I    A C        S+++V  +++++V    E+Y+ A   L   +++ A       
Sbjct: 9   IAILAMTAAC-------SSTKEVVDENLSEV----ELYQLAQKDLDNNSYTSATAKLKAL 57

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYA 142
              +PF   A ++ L   +  Y   + + A S  E +I  +P+  NVDY YY+ G+ S+ 
Sbjct: 58  ESRYPFGRYADQAQLELIYANYKNAEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFD 117

Query: 143 Q----MIRDVPYDQR-----ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
           Q    + R +P D       A +      +++  RY NS Y   A+  +   RN LA+ E
Sbjct: 118 QDVGLLARFLPLDMTKRDPGAARDSYNEFAQLTSRYPNSRYAPDAKQRMIYLRNLLASYE 177

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           + +  YYL R  YVAA  R + V+ N+ +     + +A + EAY  L L + A   +  +
Sbjct: 178 IHVAHYYLTRQAYVAAANRGRYVVENFQETPSVGDGLAVMTEAYQRLHLDELASTSLETL 237

Query: 254 QERYP 258
           +  YP
Sbjct: 238 KLNYP 242


>gi|148545912|ref|YP_001266014.1| DNA uptake lipoprotein-like protein [Pseudomonas putida F1]
 gi|148509970|gb|ABQ76830.1| DNA uptake lipoprotein-like protein [Pseudomonas putida F1]
          Length = 339

 Score = 79.3 bits (194), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 10/211 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y++A   L   +++ A          +PF   A ++ L   +  Y   + + A S  E
Sbjct: 33  ELYQQAQADLDNSSYTSAVNKLKALESRYPFGRYADQAQLELIYANYKNAEPEAAKSAAE 92

Query: 119 EYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR-----ATKLMLQYMSRIVER 168
            +I  +P+  NVDY YYL G+ S+ Q    + R +P D       A +      +++  R
Sbjct: 93  RFIRLHPQHPNVDYAYYLKGLTSFDQDRGLLARFLPLDMTKRDPGAARDSYNEFAQLTSR 152

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           + NS Y   A+  +   RN LA+ E+ +  YYL R  YVAA  R + V+ N+ +     +
Sbjct: 153 FPNSRYAPDAKQRMIYLRNLLASYEIHVADYYLSRQAYVAAANRGRYVVENFQETPSVGD 212

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            +A +VE+Y  L L + A   +  ++  YP 
Sbjct: 213 GLAVMVESYQKLHLDELAATSLETLKLNYPD 243


>gi|326576922|gb|EGE26828.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis O35E]
          Length = 356

 Score = 79.3 bits (194), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 100/221 (45%), Gaps = 21/221 (9%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           TD  Y    Y++A   L +     A E  N     +P    A+++LL   + QY A  ++
Sbjct: 41  TDAAY----YQEASEALDKNQNRNAIEALNNIRTFYPTGQYAQQALLDLIYAQYKANDFE 96

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKLM 158
                 EE+I +YP S++VDY  Y+ G+++              Q  RDV Y     +L 
Sbjct: 97  AVLQSTEEFIHRYPNSRSVDYALYVQGVTHMGGAPKASRLVRFDQSHRDVTY----LRLA 152

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
            +    +++ Y +SPYV  A   +    N  A  E+   R+Y+KR   VAA  R + V  
Sbjct: 153 FRDFQNLLKHYPDSPYVADAAQRMIAIYNDFAEHELAAARWYVKRDAMVAAANRAKWVFQ 212

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            Y  +    EA+A L  +   L L + A++   L+Q  YPQ
Sbjct: 213 YYPQSTGVPEAIAILAYSNQKLGLTETAKQYKHLLQINYPQ 253


>gi|326565267|gb|EGE15452.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis 12P80B1]
 gi|326575839|gb|EGE25762.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis CO72]
          Length = 356

 Score = 79.3 bits (194), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 100/221 (45%), Gaps = 21/221 (9%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           TD  Y    Y++A   L +     A E  N     +P    A+++LL   + QY A  ++
Sbjct: 41  TDAAY----YQEASEALDKNQNRNAIEALNNIRTFYPTGQYAQQALLDLIYAQYKANDFE 96

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKLM 158
                 EE+I +YP S++VDY  Y+ G+++              Q  RDV Y     +L 
Sbjct: 97  AVLQSTEEFIHRYPNSRSVDYALYVQGVTHMGGAPKASRLVRFDQSHRDVTY----LRLA 152

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
            +    +++ Y +SPYV  A   +    N  A  E+   R+Y+KR   VAA  R + V  
Sbjct: 153 FRDFQNLLKHYPDSPYVADAAQRMIAIYNDFAEHELAAARWYVKRDAMVAAANRAKWVFQ 212

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            Y  +    EA+A L  +   L L + A++   L+Q  YPQ
Sbjct: 213 YYPQSTGVPEAIAILAYSNQKLGLTETAKQYKQLLQINYPQ 253


>gi|313496997|gb|ADR58363.1| DNA uptake lipoprotein-like protein [Pseudomonas putida BIRD-1]
          Length = 339

 Score = 79.3 bits (194), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 10/211 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y++A   L   +++ A          +PF   A ++ L   +  Y   + + A S  E
Sbjct: 33  ELYQQAQADLDNSSYTSAVNKLKALESRYPFGRYADQAQLELIYANYKNSEPEAAKSAAE 92

Query: 119 EYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR-----ATKLMLQYMSRIVER 168
            +I  +P+  NVDY YYL G+ S+ Q    + R +P D       A +      +++  R
Sbjct: 93  RFIRLHPQHPNVDYAYYLKGLTSFDQDRGLLARFLPLDMTKRDPGAARDSYNEFAQLTSR 152

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           + NS Y   A+  +   RN LA+ E+ +  YYL R  YVAA  R + V+ N+ +     +
Sbjct: 153 FPNSRYAPDAKQRMIYLRNLLASYEIHVADYYLSRQAYVAAANRGRYVVENFQETPSVGD 212

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            +A +VE+Y  L L + A   +  ++  YP 
Sbjct: 213 GLAVMVESYQKLHLDELAATSLETLKLNYPD 243


>gi|326562906|gb|EGE13193.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis 46P47B1]
 gi|326563653|gb|EGE13905.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis
           103P14B1]
 gi|326573261|gb|EGE23229.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis
           101P30B1]
          Length = 356

 Score = 79.0 bits (193), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 100/221 (45%), Gaps = 21/221 (9%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           TD  Y    Y++A   L +     A E  N     +P    A+++LL   + QY A  ++
Sbjct: 41  TDAAY----YQEASEALDKNQNRNAIEALNNIRTFYPTGQYAQQALLDLIYAQYKANDFE 96

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKLM 158
                 EE+I +YP S++VDY  Y+ G+++              Q  RDV Y     +L 
Sbjct: 97  AVLQSTEEFIHRYPNSRSVDYALYVQGVTHMGGAPKASRLVRFDQSHRDVTY----LRLA 152

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
            +    +++ Y +SPYV  A   +    N  A  E+   R+Y+KR   VAA  R + V  
Sbjct: 153 FRDFQNLLKHYPDSPYVADAAQRMIAIYNDFAEHELAAARWYVKRDAMVAAANRAKWVFQ 212

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            Y  +    EA+A L  +   L L + A++   L+Q  YPQ
Sbjct: 213 YYPQSTGVPEAIAILAYSNQKLGLTETAKQYKQLLQINYPQ 253


>gi|296113273|ref|YP_003627211.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis RH4]
 gi|295920967|gb|ADG61318.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis RH4]
 gi|326570965|gb|EGE20989.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis BC7]
          Length = 356

 Score = 79.0 bits (193), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 100/221 (45%), Gaps = 21/221 (9%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           TD  Y +E  E      K QN   A E  N     +P    A+++LL   + QY A  ++
Sbjct: 41  TDAAYYQEASEA---LDKNQN-RNAIEALNNIRTFYPTGQYAQQALLDLIYAQYKANDFE 96

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKLM 158
                 EE+I +YP S++VDY  Y+ G+++              Q  RDV Y     +L 
Sbjct: 97  AVLQSTEEFIHRYPNSRSVDYALYVQGVTHMGGAPKASRLVRFDQSHRDVTY----LRLA 152

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
            +    +++ Y +SPYV  A   +    N  A  E+   R+Y+KR   VAA  R + V  
Sbjct: 153 FRDFQNLLKHYPDSPYVADAAQRMIAIYNDFAEHELAAARWYVKRDAMVAAANRAKWVFQ 212

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            Y  +    EA+A L  +   L L + A++   L+Q  YPQ
Sbjct: 213 YYPQSTGVPEAIAILAYSNQKLGLTETAKQYKQLLQINYPQ 253


>gi|26987359|ref|NP_742784.1| competence lipoprotein ComL, putative [Pseudomonas putida KT2440]
 gi|24982012|gb|AAN66248.1|AE016253_3 competence lipoprotein ComL, putative [Pseudomonas putida KT2440]
          Length = 339

 Score = 79.0 bits (193), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 10/211 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y++A   L   +++ A          +PF   A ++ L   +  Y   + + A S  E
Sbjct: 33  ELYQQAQADLDNSSYTSAVNKLKALESRYPFGRYADQAQLELIYANYKNSEPEAAKSAAE 92

Query: 119 EYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR-----ATKLMLQYMSRIVER 168
            +I  +P+  NVDY YYL G+ S+ Q    + R +P D       A +      +++  R
Sbjct: 93  RFIRLHPQHPNVDYAYYLKGLTSFDQDRGLLARFLPLDMTKRDPGAARDSYNEFAQLTSR 152

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           + NS Y   A+  +   RN LA+ E+ +  YYL R  YVAA  R + V+ N+ +     +
Sbjct: 153 FPNSRYAPDAKQRMIYLRNLLASYEIHVADYYLSRQAYVAAANRGRYVVENFQETPSVGD 212

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            +A +VE+Y  L L + A   +  ++  YP 
Sbjct: 213 GLAVMVESYQKLHLDELAATSLETLKLNYPD 243


>gi|332530534|ref|ZP_08406473.1| putative transmembrane protein [Hylemonella gracilis ATCC 19624]
 gi|332040009|gb|EGI76396.1| putative transmembrane protein [Hylemonella gracilis ATCC 19624]
          Length = 276

 Score = 79.0 bits (193), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 102/216 (47%), Gaps = 13/216 (6%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D  T      E+ E+A   ++   +++A   F +         +A+++ L  A+ QY   
Sbjct: 30  DDPTAKMKPEEILEQAREEVRNFQYTQAVTLFEKLEGRAAGTPLAQQAQLEKAYAQYKDD 89

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGM----------SYAQMIRDVPYDQRATKLM 158
           +  QA +  + ++  +P S  +DY  YL G+          S+         DQ A K  
Sbjct: 90  QSAQAVATLDRFMRLHPASPAIDYALYLKGLVNFNDDLGLFSFITRQDLSERDQLAAKES 149

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
               + +V R+ +S Y   AR  +    N LA  EV + RYY KRG YVAAI R Q  +A
Sbjct: 150 WSAFNELVTRFPDSRYSADARARMVYIVNTLARYEVHVARYYFKRGAYVAAINRAQQAVA 209

Query: 219 NYSDAEHAEEAMARLVEAYVALA---LMDEAREVVS 251
           +Y  A   E+A+  LV++Y AL    L D+AR V++
Sbjct: 210 DYRTAPALEDALQILVDSYEALNMPQLRDDARRVLA 245


>gi|152997614|ref|YP_001342449.1| competence lipoprotein ComL [Marinomonas sp. MWYL1]
 gi|150838538|gb|ABR72514.1| competence lipoprotein ComL, putative [Marinomonas sp. MWYL1]
          Length = 280

 Score = 79.0 bits (193), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 121/251 (48%), Gaps = 20/251 (7%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           L +F+  + FS+   F+V    +  R+  L        +R  Y+KA   LKE   + A +
Sbjct: 7   LLRFSGIVSFSL---FIVACSSKQVREPDLP-------ERVYYDKAQQALKENLPTTAIK 56

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
           +       +PF   + ++ L   + Q  A  +  A +  E +I  +PE  +VDY YY+  
Sbjct: 57  HLKDLDSRYPFGEFSTRAELDLIYAQMEASDFIAAHASAERFIKNHPEHDSVDYAYYMRA 116

Query: 139 MSY-----AQMIRDVPYD--QRATKLMLQYMSRIVE---RYTNSPYVKGARFYVTVGRNQ 188
           +S      + M R +  D  +R +K + +  + + +   R+  S Y   A+  +   R  
Sbjct: 117 LSTYKGAESLMSRYLNLDPSERDSKELAKAFNELADFTSRFPESTYAPDAKARMYYLREM 176

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           +A  E+++ RYYLKR   ++A+ R Q V+ +Y      EEA+A  +++Y  L   D A+ 
Sbjct: 177 VARHELQVARYYLKRKAPLSALRRSQEVIQHYPSTRSVEEALAISIQSYNDLKQTDLAQT 236

Query: 249 VVSLIQERYPQ 259
            ++++++ +P 
Sbjct: 237 NLAVLKQNFPH 247


>gi|326560262|gb|EGE10650.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis 7169]
 gi|326566420|gb|EGE16570.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis BC1]
          Length = 356

 Score = 79.0 bits (193), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 100/221 (45%), Gaps = 21/221 (9%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           TD  Y    Y++A   L +     A E  N     +P    A+++LL   + QY A  ++
Sbjct: 41  TDAAY----YQEASEALDKNQNRNAIEALNNIRTFYPTGQYAQQALLDLIYAQYKANDFE 96

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKLM 158
                 EE+I +YP S++VDY  Y+ G+++              Q  RDV Y     +L 
Sbjct: 97  AVLQSTEEFIHRYPNSRSVDYALYVQGVTHMGGAPKASRLVRFDQSHRDVTY----LRLA 152

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
            +    +++ Y +SPYV  A   +    N  A  E+   R+Y+KR   VAA  R + V  
Sbjct: 153 FRDFQNLLKHYPDSPYVADAAQRMIAIYNDFAEHELAAARWYVKRDAMVAAANRAKWVFQ 212

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            Y  +    EA+A L  +   L L + A++   L+Q  YPQ
Sbjct: 213 YYPQSTGVPEAIAILAYSNQKLGLTETAKQYKQLLQINYPQ 253


>gi|289209196|ref|YP_003461262.1| outer membrane assembly lipoprotein YfiO [Thioalkalivibrio sp.
           K90mix]
 gi|288944827|gb|ADC72526.1| outer membrane assembly lipoprotein YfiO [Thioalkalivibrio sp.
           K90mix]
          Length = 279

 Score = 79.0 bits (193), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 10/210 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L E N+ +A EY+ +    +PF   A+++ +   +  Y A + + A +  +
Sbjct: 37  QLYGEAKNALNEGNYDQAVEYYEKLEARYPFGRYAQQAQIEIPYAYYKAREPEAAIAAVD 96

Query: 119 EYITQYPESKNVDYVYYLVGMS--------YAQMIRDVP--YDQRATKLMLQYMSRIVER 168
            +I   P   N+DY YYL G+          A +    P   D    +   Q   R++  
Sbjct: 97  RFIQLNPRHPNLDYAYYLRGLINFNRQQGFLANLFPRDPAEMDPEPFEQAFQDFDRLIRE 156

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           + +S Y + +   +   RN LAA E+ +  +Y++R  +VA   R + VLA Y  AE   +
Sbjct: 157 FPDSRYAQDSYLRMVYIRNALAAYELRVAEFYMERTAWVAGAERARHVLATYPGAEVQPQ 216

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYP 258
           A+  L  AY  L L D A   + +++  YP
Sbjct: 217 ALGVLWRAYTELGLEDYADATMQVLELNYP 246


>gi|238791394|ref|ZP_04635033.1| hypothetical protein yinte0001_31510 [Yersinia intermedia ATCC
           29909]
 gi|238729527|gb|EEQ21042.1| hypothetical protein yinte0001_31510 [Yersinia intermedia ATCC
           29909]
          Length = 240

 Score = 79.0 bits (193), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 105/233 (45%), Gaps = 15/233 (6%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
           A   LV     S++DV  D+        E+Y  A   L++ NF  A          +PF 
Sbjct: 8   ATLSLVLTGCSSNKDVVPDNPP-----SELYATAQQKLQDGNFKGAITQLEALDNRYPFG 62

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM------ 144
             +++  L   +  Y +     A +  + ++   P   N+DYV Y+ G++   +      
Sbjct: 63  PYSQQVQLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVLYMRGLTDMALDDSALQ 122

Query: 145 ----IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
               I     D +  K   +  +++++ Y NS Y   A+  +T  +N+LA  E+ + +YY
Sbjct: 123 GFFGIDRSDRDPQHAKAAFRDFNQLIQNYPNSQYATDAQKRLTFLKNRLAKHELAVAQYY 182

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            KRG YVA + R + +L +Y D +   +A+  +  AY  L L  EA +V  +I
Sbjct: 183 TKRGAYVAVVNRVEQMLRDYPDTQATRDALPLMENAYKQLQLNAEADKVAKII 235


>gi|326570228|gb|EGE20273.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis BC8]
          Length = 356

 Score = 79.0 bits (193), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 100/221 (45%), Gaps = 21/221 (9%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           TD  Y    Y++A   L +     A E  N     +P    A+++LL   + QY A  ++
Sbjct: 41  TDAAY----YQEASEALDKNQNRNAIEALNNIRTFYPTGQYAQQALLDLIYAQYKANDFE 96

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKLM 158
                 EE+I +YP S++VDY  Y+ G+++              Q  RDV Y     +L 
Sbjct: 97  AVLQSTEEFIHRYPNSRSVDYALYVQGVTHMGGAPKASRLVRFDQSHRDVTY----LRLA 152

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
            +    +++ Y +SPYV  A   +    N  A  E+   R+Y+KR   VAA  R + V  
Sbjct: 153 FRDFQNLLKHYPDSPYVADAAQRMIAIYNDFAEHELAAARWYVKRDAMVAAANRAKWVFQ 212

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            Y  +    EA+A L  +   L L + A++   L+Q  YPQ
Sbjct: 213 YYPQSTGVPEAIAILAYSNQKLGLTETAKQYKQLLQINYPQ 253


>gi|293604135|ref|ZP_06686543.1| competence lipoprotein ComL [Achromobacter piechaudii ATCC 43553]
 gi|292817360|gb|EFF76433.1| competence lipoprotein ComL [Achromobacter piechaudii ATCC 43553]
          Length = 262

 Score = 78.6 bits (192), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 10/211 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y  A   +    + +A E        +PF   A+++LL  A+V +  G+ +QA +  +
Sbjct: 33  QLYADAKSEMSSGGWKEARERLTAIESRYPFGVYAQQALLELAYVNWKDGENEQALAAID 92

Query: 119 EYITQYPESKNVDYVYYLVGMS--------YAQMIRDVPYDQRATKLMLQY--MSRIVER 168
            +   YP     DY  YL G+            +    P ++    L   Y   + +++R
Sbjct: 93  RFQQLYPNHPGTDYALYLKGLINFTPASAFMTSITGQDPAERDPKGLRASYDAFNELIKR 152

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y +S Y   A   +    N +A  EV + RYY +RG YVAA  R Q V+ ++  A   EE
Sbjct: 153 YPDSKYSVDAEKRIAWLVNTIAMNEVHVARYYYERGAYVAAANRAQTVITDFEGAPATEE 212

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           A+  +VE+Y  L + D   +   +  + +P 
Sbjct: 213 ALYLMVESYDKLGMTDLKNDAQRVYDKNFPN 243


>gi|187477716|ref|YP_785740.1| lipoprotein [Bordetella avium 197N]
 gi|115422302|emb|CAJ48826.1| lipoprotein [Bordetella avium 197N]
          Length = 282

 Score = 78.6 bits (192), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 10/198 (5%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           N+ +A +        +PF   A+++L+  A+V +  G+ +QA +  + +   YP     D
Sbjct: 64  NWKEARDRLTAIESRYPFGTYAQQALIELAYVNWKDGENEQALAAIDRFQQLYPNHPGTD 123

Query: 132 YVYYLVGMS--------YAQMIRDVPYDQRATKLMLQY--MSRIVERYTNSPYVKGARFY 181
           YV YL G+          A +    P ++    L   Y   + +++R+ +S Y   A   
Sbjct: 124 YVLYLKGLINFTPASAFMANLTGQDPAERDPKGLRASYDAFNELIKRFPDSKYTPDAEQR 183

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
           +    N +A  EV + RYY  RG YVAAI R Q VL ++  A   EEA+  +V +Y  L 
Sbjct: 184 MNWLVNAIAMNEVHVARYYYTRGAYVAAINRAQTVLTDFDGAPATEEALYIMVLSYDKLQ 243

Query: 242 LMDEAREVVSLIQERYPQ 259
           +     +   ++ + +P 
Sbjct: 244 MKQLKEDTERVLDKNFPN 261


>gi|59800727|ref|YP_207439.1| ComL [Neisseria gonorrhoeae FA 1090]
 gi|194097999|ref|YP_002001047.1| ComL, competence lipoprotein [Neisseria gonorrhoeae NCCP11945]
 gi|239998465|ref|ZP_04718389.1| ComL, competence lipoprotein [Neisseria gonorrhoeae 35/02]
 gi|240013590|ref|ZP_04720503.1| ComL, competence lipoprotein [Neisseria gonorrhoeae DGI18]
 gi|240016029|ref|ZP_04722569.1| ComL, competence lipoprotein [Neisseria gonorrhoeae FA6140]
 gi|240080170|ref|ZP_04724713.1| ComL, competence lipoprotein [Neisseria gonorrhoeae FA19]
 gi|240112384|ref|ZP_04726874.1| ComL, competence lipoprotein [Neisseria gonorrhoeae MS11]
 gi|240115124|ref|ZP_04729186.1| ComL, competence lipoprotein [Neisseria gonorrhoeae PID18]
 gi|240117407|ref|ZP_04731469.1| ComL, competence lipoprotein [Neisseria gonorrhoeae PID1]
 gi|240120660|ref|ZP_04733622.1| ComL, competence lipoprotein [Neisseria gonorrhoeae PID24-1]
 gi|240122964|ref|ZP_04735920.1| ComL, competence lipoprotein [Neisseria gonorrhoeae PID332]
 gi|240125215|ref|ZP_04738101.1| ComL, competence lipoprotein [Neisseria gonorrhoeae SK-92-679]
 gi|240127669|ref|ZP_04740330.1| ComL, competence lipoprotein [Neisseria gonorrhoeae SK-93-1035]
 gi|254493185|ref|ZP_05106356.1| competence lipoprotein comL [Neisseria gonorrhoeae 1291]
 gi|260441059|ref|ZP_05794875.1| ComL, competence lipoprotein [Neisseria gonorrhoeae DGI2]
 gi|268594326|ref|ZP_06128493.1| peptidoglycan-linked lipoprotein [Neisseria gonorrhoeae 35/02]
 gi|268596321|ref|ZP_06130488.1| peptidoglycan-linked lipoprotein [Neisseria gonorrhoeae FA19]
 gi|268598445|ref|ZP_06132612.1| competence lipoprotein comL [Neisseria gonorrhoeae MS11]
 gi|268600799|ref|ZP_06134966.1| competence lipoprotein comL [Neisseria gonorrhoeae PID18]
 gi|268603104|ref|ZP_06137271.1| competence lipoprotein comL [Neisseria gonorrhoeae PID1]
 gi|268681585|ref|ZP_06148447.1| competence lipoprotein comL [Neisseria gonorrhoeae PID332]
 gi|268683813|ref|ZP_06150675.1| competence lipoprotein comL [Neisseria gonorrhoeae SK-92-679]
 gi|268686055|ref|ZP_06152917.1| competence lipoprotein comL [Neisseria gonorrhoeae SK-93-1035]
 gi|291044391|ref|ZP_06570100.1| peptidoglycan-linked lipoprotein [Neisseria gonorrhoeae DGI2]
 gi|293399572|ref|ZP_06643725.1| lipoprotein [Neisseria gonorrhoeae F62]
 gi|5921830|sp|Q50985|COML_NEIGO RecName: Full=Competence lipoprotein ComL; Flags: Precursor
 gi|1107833|emb|CAA90076.1| ComL, competence lipoprotein [Neisseria gonorrhoeae]
 gi|59717622|gb|AAW89027.1| competence lipoprotein [Neisseria gonorrhoeae FA 1090]
 gi|193933289|gb|ACF29113.1| ComL, competence lipoprotein [Neisseria gonorrhoeae NCCP11945]
 gi|226512225|gb|EEH61570.1| competence lipoprotein comL [Neisseria gonorrhoeae 1291]
 gi|268547715|gb|EEZ43133.1| peptidoglycan-linked lipoprotein [Neisseria gonorrhoeae 35/02]
 gi|268550109|gb|EEZ45128.1| peptidoglycan-linked lipoprotein [Neisseria gonorrhoeae FA19]
 gi|268582576|gb|EEZ47252.1| competence lipoprotein comL [Neisseria gonorrhoeae MS11]
 gi|268584930|gb|EEZ49606.1| competence lipoprotein comL [Neisseria gonorrhoeae PID18]
 gi|268587235|gb|EEZ51911.1| competence lipoprotein comL [Neisseria gonorrhoeae PID1]
 gi|268621869|gb|EEZ54269.1| competence lipoprotein comL [Neisseria gonorrhoeae PID332]
 gi|268624097|gb|EEZ56497.1| competence lipoprotein comL [Neisseria gonorrhoeae SK-92-679]
 gi|268626339|gb|EEZ58739.1| competence lipoprotein comL [Neisseria gonorrhoeae SK-93-1035]
 gi|291011285|gb|EFE03281.1| peptidoglycan-linked lipoprotein [Neisseria gonorrhoeae DGI2]
 gi|291610141|gb|EFF39263.1| lipoprotein [Neisseria gonorrhoeae F62]
 gi|317163747|gb|ADV07288.1| ComL [Neisseria gonorrhoeae TCDC-NG08107]
 gi|1588996|prf||2209423A lipoprotein
          Length = 267

 Score = 78.6 bits (192), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 103/212 (48%), Gaps = 10/212 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L   N+++A + +      FP +  AR+S L +A+  Y   +  +A +  E
Sbjct: 37  KLYAEAQDELNSSNYTRAVKLYEILESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIE 96

Query: 119 EYITQYPESKNVDYVYYLVGM-------SYAQMIRDVPY---DQRATKLMLQYMSRIVER 168
            +   +P+  N+DY  YL G+       S+   +    +   D +A +   Q  + +V+R
Sbjct: 97  RFRRLHPQHPNMDYALYLRGLVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQR 156

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           + NS Y   A   +    + L   E+ + RYY+KRG Y+AA  R + ++ +Y +  + EE
Sbjct: 157 FPNSKYAADATARMVKLVDALGGNEMSVARYYMKRGAYIAAANRAKKIIGSYQNTRYVEE 216

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           ++A L  AY  L     A +   +++  +P+ 
Sbjct: 217 SLAILELAYKKLDKPQLAADTRRVLETNFPKS 248


>gi|121611397|ref|YP_999204.1| hypothetical protein Veis_4485 [Verminephrobacter eiseniae EF01-2]
 gi|121556037|gb|ABM60186.1| putative transmembrane protein [Verminephrobacter eiseniae EF01-2]
          Length = 265

 Score = 78.6 bits (192), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 59/181 (32%), Positives = 95/181 (52%), Gaps = 16/181 (8%)

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS--------YAQ 143
           +A+++ +  A+  Y +G+  QA +  + ++  +P S  +DY  YL G++        ++ 
Sbjct: 69  LAQQAQIDKAYAHYKSGEKAQAVATLDRFMKLHPVSPALDYALYLKGLANFNDNLGLFSF 128

Query: 144 MIRD--VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
           + R+     DQ+A K   +    +V R+  S Y + AR  +T   N LA  EV + RYY 
Sbjct: 129 ISREDLSERDQQAAKDSFEAFRELVNRFPQSRYAQDARQRMTYIVNSLAQYEVHVARYYY 188

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL---ALMDEAREVVSLIQERYP 258
             G YVAAI R  L L++Y      EEA+  L+++Y AL   AL D+AR V   + + YP
Sbjct: 189 LHGAYVAAIGRAHLALSDYQGVPAQEEALYILIQSYDALGMTALRDDARRV---MDKSYP 245

Query: 259 Q 259
           Q
Sbjct: 246 Q 246


>gi|239815170|ref|YP_002944080.1| outer membrane assembly lipoprotein YfiO [Variovorax paradoxus
           S110]
 gi|239801747|gb|ACS18814.1| outer membrane assembly lipoprotein YfiO [Variovorax paradoxus
           S110]
          Length = 268

 Score = 78.6 bits (192), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 87/178 (48%), Gaps = 10/178 (5%)

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM--------SYAQ 143
           +A+++ L  A+ QY +G+   A +  + ++  +P S  +DY  YL G+         +A 
Sbjct: 72  LAQQAQLEKAYAQYKSGEKANAIATIDRFLKLHPASPAIDYALYLKGVINFNDDLGMFAF 131

Query: 144 MIRD--VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
           + R      DQ+A K   +    +  R+  S Y   AR  +    N LA  EV + RYY 
Sbjct: 132 LTRQDLSERDQKAAKESFESFKELATRFPESRYAPDARQRMNYIVNSLAQYEVHVARYYY 191

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            RG Y+AAI R QL L++Y +    EEA+  +V +Y AL + D   +   ++   YP 
Sbjct: 192 SRGAYLAAINRAQLALSDYREVPALEEALYIIVRSYDALGMKDLRDDAQRVLTTNYPH 249


>gi|256822305|ref|YP_003146268.1| outer membrane assembly lipoprotein YfiO [Kangiella koreensis DSM
           16069]
 gi|256795844|gb|ACV26500.1| outer membrane assembly lipoprotein YfiO [Kangiella koreensis DSM
           16069]
          Length = 268

 Score = 78.6 bits (192), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 99/211 (46%), Gaps = 10/211 (4%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +E+++ A   ++  N+ +A E   +    +PF  ++ ++ L   +  +    Y+   +L 
Sbjct: 51  QELFDGAKRSMRNGNYVRATELLEEIDTRYPFGRISEQAKLELIYAYFKRADYESGQALA 110

Query: 118 EEYITQYPESKNVDYVYYLVG-MSYAQMI---RDV------PYDQRATKLMLQYMSRIVE 167
           + ++ Q+P+ +N DYVYY+ G M Y Q +   ++V        D    K        +VE
Sbjct: 111 DRFLRQHPQHENADYVYYMKGVMHYEQEVGTFKEVFSADIEKRDTSNIKAAFDNFKALVE 170

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y  S Y   AR  +   RN LA  E+ + RYY++R  Y+ A  R + ++ N+       
Sbjct: 171 VYPESEYAPDARKRMIQIRNLLADYELHVARYYMQRDSYIGAANRAKYIVENFPKTPAVP 230

Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYP 258
            A+  L+ +Y  L L + + E   ++   YP
Sbjct: 231 SALEILINSYKILELPEISEEYRKVLLLNYP 261


>gi|145297341|ref|YP_001140182.1| ComL family lipoprotein [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|142850113|gb|ABO88434.1| lipoprotein, ComL family [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 257

 Score = 78.6 bits (192), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 12/216 (5%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y+KA L L   N+  A E        +PF   + +  L   +  Y      QA +  + 
Sbjct: 42  LYQKARLKLDAGNYVNAIELLEALDSRYPFGAYSNQVQLDLIYAYYKQDDTAQAIANIDR 101

Query: 120 YITQYPESKNVDYVYYLVGMS-----------YAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +I   P  KN+DYV+Y+ G++           +  + RD   D    +   Q    +++ 
Sbjct: 102 FIRLNPAHKNIDYVFYMRGLTNMAGDYNFFQDFLGINRD-DKDPSYARQAFQDFKTLLQN 160

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS Y   AR  +   +N+LA  ++ +  YY+KR   +AA  R +L++  Y D    E+
Sbjct: 161 YPNSVYAADARARMIGLKNRLARYDLSVAEYYVKRDALIAAANRAKLIVETYPDTAETEK 220

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
           A+  +VE+Y  L +   A+    ++ + YP     R
Sbjct: 221 ALEIMVESYDTLKMPTLAQHAREVLAKNYPDNRLGR 256


>gi|167031684|ref|YP_001666915.1| competence lipoprotein ComL [Pseudomonas putida GB-1]
 gi|166858172|gb|ABY96579.1| competence lipoprotein ComL [Pseudomonas putida GB-1]
          Length = 339

 Score = 78.6 bits (192), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 10/210 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y++A   L   +++ A          +PF   A ++ L   +  Y   + + A S  E
Sbjct: 33  ELYQQAQADLDNSSYTSAVNKLKALESRYPFGRYADQAQLELIYANYKNSEPEAAKSAAE 92

Query: 119 EYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR-----ATKLMLQYMSRIVER 168
            +I  +P+  NVDY YYL G+ S+ Q    + R +P D       A +      +++  R
Sbjct: 93  RFIRLHPQHPNVDYAYYLKGLTSFDQDRGLLARFLPLDMTKRDPGAARDSYNEFAQLTSR 152

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           + NS Y   A+  +   RN LA+ E+ +  YYL R  YVAA  R + V+ N+ +     +
Sbjct: 153 FPNSRYAPDAKQRMIYLRNLLASYEIHVADYYLSRQAYVAAANRGRYVVENFQETPSVGD 212

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYP 258
            +A +VE+Y  + L + A   +  ++  YP
Sbjct: 213 GLAVMVESYQKMHLDELAASSLETLKLNYP 242


>gi|322514977|ref|ZP_08067989.1| DNA uptake lipoprotein [Actinobacillus ureae ATCC 25976]
 gi|322119030|gb|EFX91194.1| DNA uptake lipoprotein [Actinobacillus ureae ATCC 25976]
          Length = 260

 Score = 78.6 bits (192), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 120/245 (48%), Gaps = 17/245 (6%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           KF       +    +VG    +++++   S  D+      Y K   +L++ +++ A  Y 
Sbjct: 3   KFTSLASLMLVGLLVVGCSNSANKELEESSAQDL------YTKGQTYLQDGDYNSAIRYL 56

Query: 81  NQC-SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
           +   ++    +    ++ L   +  Y  G+Y +A    E ++  YP S ++DYVYYL G+
Sbjct: 57  DAVGTKGGQQSAFGEQTQLSLIYANYKVGEYYKALDAAERFVRAYPNSASMDYVYYLAGL 116

Query: 140 SYAQM----IRDVPYDQRATKLMLQYMS------RIVERYTNSPYVKGARFYVTVGRNQL 189
           S A++    I+D     RA++ +    +       IV+ Y  S Y + A+ ++    N++
Sbjct: 117 SNARLGDNFIQDFFGVNRASRALDSVRNAYGSFQTIVQHYPQSKYAQDAKNWMGYLINRM 176

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           A  E+ I ++Y  R  YVA + R + ++  Y +++   EA+A + +AY  + + D A +V
Sbjct: 177 AEHELAIVKFYDDREAYVAVVNRVEEMMRFYPESKPTYEALAYMQKAYEQIGIKDSAEKV 236

Query: 250 VSLIQ 254
            +LI+
Sbjct: 237 AALIE 241


>gi|238765379|ref|ZP_04626303.1| hypothetical protein ykris0001_45070 [Yersinia kristensenii ATCC
           33638]
 gi|238696421|gb|EEP89214.1| hypothetical protein ykris0001_45070 [Yersinia kristensenii ATCC
           33638]
          Length = 240

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 105/233 (45%), Gaps = 15/233 (6%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
           A   LV     S++DV  D+        E+Y  A   L++ NF  A          +PF 
Sbjct: 8   ATLSLVLTGCSSNKDVVPDNPP-----SELYATAQQKLQDGNFKGAITQLEALDNRYPFG 62

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM------ 144
             +++  L   +  Y +     A +  + ++   P   N+DYV Y+ G++   +      
Sbjct: 63  PYSQQVQLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVLYMRGLTDMALDDSALQ 122

Query: 145 ----IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
               I     D +  K   +  +++++ Y NS Y   A+  +T  +N+LA  E+ + +YY
Sbjct: 123 GFFGIDRSDRDPQHAKAAFRDFNQLIQSYPNSQYATDAQKRLTFLKNRLAKHELAVAQYY 182

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            KRG YVA + R + +L +Y D +   +A+  +  AY  L L  EA +V  +I
Sbjct: 183 TKRGAYVAVVNRVEQMLRDYPDTQATRDALPLMENAYKQLQLNAEADKVAKII 235


>gi|297180550|gb|ADI16762.1| DNA uptake lipoprotein [uncultured gamma proteobacterium
           HF0010_11B23]
          Length = 224

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 98/195 (50%), Gaps = 10/195 (5%)

Query: 68  LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
           +  QN+  A +   +  R +PF   A ++     +  Y +G Y QA +  E++I  YP +
Sbjct: 26  ISAQNYLGAVDSLVRIERFYPFGVYAEQARADLIYAHYMSGDYDQAYAASEKFIRLYPRN 85

Query: 128 KNVDYVYYLVGMS--YAQ-----MIRDVPYDQRATKLMLQYMSRIVE---RYTNSPYVKG 177
            NVDY Y++ GM+  YA       +  +   +R     +Q  + + E   RY  S Y+  
Sbjct: 86  TNVDYAYFMKGMTGYYADEGLLGNLFSLSLAKRDIGGAMQSYADLTEFLIRYPESEYIDA 145

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           AR  +   RN +A+ E++   YY+KRG Y+AA+ R   VL N  ++   + A+  + +++
Sbjct: 146 ARERLIFLRNLIASSELDGAEYYMKRGAYLAALNRANYVLKNIPNSTETQRALDIMKKSF 205

Query: 238 VALALMDEAREVVSL 252
           + L   + A +V S+
Sbjct: 206 IELGYEEYAEKVSSV 220


>gi|325273288|ref|ZP_08139565.1| competence lipoprotein ComL [Pseudomonas sp. TJI-51]
 gi|324101573|gb|EGB99142.1| competence lipoprotein ComL [Pseudomonas sp. TJI-51]
          Length = 339

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 10/210 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y++A   L   +++ A          +PF   A ++ L   +  Y   + + A S  E
Sbjct: 33  ELYQQAQADLDNSSYTSAVNKLKALESRYPFGRYADQAQLELIYANYKNAEPEAAKSAAE 92

Query: 119 EYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR-----ATKLMLQYMSRIVER 168
            +I  +P+  NVDY YYL G+ S+ Q    + R +P D       A +      +++  R
Sbjct: 93  RFIRLHPQHPNVDYAYYLKGLTSFDQDRGLLARFLPLDMTKRDPGAARDSYNEFAQLTSR 152

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           + NS Y   A+  +   RN LA+ E+ +  YYL R  YVAA  R + V+ N+ +     +
Sbjct: 153 FPNSRYAPDAKQRMIYLRNLLASYEIHVADYYLSRQAYVAAANRGRYVVENFQETPSVGD 212

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYP 258
            +A +VE+Y  + L + A   +  ++  YP
Sbjct: 213 GLAVMVESYQKMHLDELAATSLETLKLNYP 242


>gi|332525785|ref|ZP_08401929.1| hypothetical protein RBXJA2T_08043 [Rubrivivax benzoatilyticus JA2]
 gi|332109339|gb|EGJ10262.1| hypothetical protein RBXJA2T_08043 [Rubrivivax benzoatilyticus JA2]
          Length = 253

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 91/177 (51%), Gaps = 10/177 (5%)

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS--------YAQ 143
           +A++S +  A++ +  G+  QA +  E +I   P S  +DY  YL G+         + +
Sbjct: 57  LAQQSQIDLAYLYWKTGERAQALTTIERFIRLNPSSPALDYAMYLRGLINFNEDMGLFGR 116

Query: 144 MIRD--VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
           + R      DQRA +   Q   ++VE++  S Y   A+  +    N LAA EV + RYY 
Sbjct: 117 IARQDLSERDQRAARDAYQAFKQLVEQFPQSRYTPDAKLRMDYIVNSLAAYEVHVARYYF 176

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           KRG YVAA  R Q  +A +  +  AEE +  +V++Y  L L+    + + ++Q+ YP
Sbjct: 177 KRGAYVAAANRAQQAVAEFQRSPAAEEGLFLMVQSYDRLQLVQLRDDALRVLQKNYP 233


>gi|104783635|ref|YP_610133.1| competence lipoprotein ComL [Pseudomonas entomophila L48]
 gi|95112622|emb|CAK17350.1| putative competence lipoprotein ComL [Pseudomonas entomophila L48]
          Length = 339

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 10/210 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y++A   L   +++ A          +PF   A ++ L   +  Y   + + A S  E
Sbjct: 33  ELYQQAQADLDNSSYTSAVNKLKALESRYPFGRYADQAQLELIYANYKNSEPEAAKSAAE 92

Query: 119 EYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR-----ATKLMLQYMSRIVER 168
            +I  +P+  NVDY YYL G+ S+ Q    + R +P D       A +      +++  R
Sbjct: 93  RFIRLHPQHPNVDYAYYLKGLTSFDQDRGLLARFLPLDMTKRDPGAARDSYNEFAQLTSR 152

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           + NS Y   A+  +   RN LA+ E+ +  YYL R  YVAA  R + V+ N+ +     +
Sbjct: 153 FPNSRYSPDAKQRMIYLRNLLASYEIHVANYYLSREAYVAAANRGRYVVENFQETPSVGD 212

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYP 258
            +A +VE+Y  + L + A   +  ++  YP
Sbjct: 213 GLAVMVESYQHMHLDELAATSLETLKLNYP 242


>gi|221135102|ref|ZP_03561405.1| Competence lipoprotein ComL [Glaciecola sp. HTCC2999]
          Length = 252

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 96/210 (45%), Gaps = 10/210 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y KA   ++  NF  A E  +     +PF  ++ +  L   +  Y +G   QA +  + 
Sbjct: 38  IYAKAKTAMENGNFGGAAEILSDLDSRYPFGELSHQVQLDLIYSYYKSGDSAQALATIDR 97

Query: 120 YITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERY 169
           +I   P  K++DY Y++ G++  +M          I     D  A++       ++++ +
Sbjct: 98  FIRLNPNHKDIDYAYFMRGLTNMEMDDNLFQSLFNIDRSDRDPSASREAFNDFRQLLDTF 157

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
             S Y   A+  +   + +LA  E+ I R+Y++R  YVAA  R Q VL  Y D    +EA
Sbjct: 158 PESKYATDAQKRMVYIKTRLAKYEIAIARFYMRREAYVAAANRGQYVLEYYPDTGMVQEA 217

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQ 259
           +  +V  Y  L L       + +++  YP+
Sbjct: 218 LEIMVSCYDQLGLDQLKANAIKILKLNYPE 247


>gi|160898939|ref|YP_001564521.1| putative transmembrane protein [Delftia acidovorans SPH-1]
 gi|160364523|gb|ABX36136.1| putative transmembrane protein [Delftia acidovorans SPH-1]
          Length = 263

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 88/192 (45%), Gaps = 13/192 (6%)

Query: 73  FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
           F KA   F +         +A+++ L  A+ QY +G   QA +  + ++  +P S   DY
Sbjct: 50  FDKAVPLFEKLEGRAAGTPLAQQAQLDKAYAQYKSGDKIQATATLDRFLKLHPASPATDY 109

Query: 133 VYYLVGM----------SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
             YL G+          S+         DQ+A K   +    +V R+  S Y + +R  +
Sbjct: 110 ALYLKGLVNFNDNLGMFSWLSRQDLSERDQKAAKDSFESFRELVTRFPESRYAEDSRLRM 169

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA- 241
               N LA  EV + RYY  RG YVAAI R Q  + +Y       EAM  LV +Y AL  
Sbjct: 170 QYIVNSLAQYEVHVARYYYGRGAYVAAIARAQTAVKDYQGVPAVREAMQILVNSYDALGM 229

Query: 242 --LMDEAREVVS 251
             L D+A+ V++
Sbjct: 230 TQLRDDAQRVLT 241


>gi|255019803|ref|ZP_05291879.1| Probable component of the lipoprotein assembly complex (forms a
           complex with YaeT, YfgL, and NlpB) [Acidithiobacillus
           caldus ATCC 51756]
 gi|254970732|gb|EET28218.1| Probable component of the lipoprotein assembly complex (forms a
           complex with YaeT, YfgL, and NlpB) [Acidithiobacillus
           caldus ATCC 51756]
          Length = 249

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 111/236 (47%), Gaps = 2/236 (0%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRY--QREVYEKAVLFLKEQNFSKAYEYFNQC 83
           IF  +A   L+G     + D   DS+ +  +     +Y  A       ++S A   + + 
Sbjct: 6   IFPIVAHLTLLGVLSGCASDGAKDSLKESSHLSAAAMYRPAKAAQDRGDYSSAVRLYEEL 65

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +P+   A ++ L +A+  Y  G  + AA+  E +I  +P +  VDY +YL G++Y Q
Sbjct: 66  ETRYPYGPYAEQAQLNTAYCYYKQGDSEAAAAAAERFIKLHPVNPFVDYAWYLKGIAYYQ 125

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
            I+   ++ +  +     +  +V+R+ NS Y   AR  +    + L  +E++I ++Y  R
Sbjct: 126 AIQGAQWNPKPLEESFATLETLVKRWPNSAYAADARLRMEKIIDILGQRELDICKFYYIR 185

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
             YVAA  R   V+  Y  +   EEA+  L  +Y  + L   A+    +++  YPQ
Sbjct: 186 HAYVAAANRCNDVVTRYQLSPAREEALYYLSLSYRHMNLDGLAKTTAGVLKANYPQ 241


>gi|197284292|ref|YP_002150164.1| outer membrane protein assembly complex subunit YfiO [Proteus
           mirabilis HI4320]
 gi|194681779|emb|CAR40993.1| putative lipoprotein [Proteus mirabilis HI4320]
          Length = 244

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 12/206 (5%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y  +   L + N+  A +        +PF   +++  L   +  Y + +   A S  +
Sbjct: 35  ELYATSQEKLLDGNYGAAIKQLESLDNRYPFGPYSQQVQLDLIYAYYKSAELPMAISAID 94

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPY-----------DQRATKLMLQYMSRIVE 167
            ++   P   N+DYV Y+ G++ AQ + D              D +  ++  +  S++V 
Sbjct: 95  RFMRLNPTHPNIDYVLYMRGLT-AQALDDSALQGFFGIDRSDRDPQHARVAFKDFSQLVR 153

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y +S Y   A   +   +N+LA  E+ + ++Y KRG YVA I R + ++ +Y D E   
Sbjct: 154 YYPDSLYTADATKRLVFLKNRLAKYELSVAKFYTKRGAYVAVINRVEQMMRDYPDTEATR 213

Query: 228 EAMARLVEAYVALALMDEAREVVSLI 253
           EA+  +  AY  L L  EA +V SLI
Sbjct: 214 EALVYMENAYKKLGLTQEADKVASLI 239


>gi|119476935|ref|ZP_01617216.1| competence protein ComL [marine gamma proteobacterium HTCC2143]
 gi|119449742|gb|EAW30979.1| competence protein ComL [marine gamma proteobacterium HTCC2143]
          Length = 294

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 111/229 (48%), Gaps = 16/229 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + + A +IF S  V  L G    SS D     +T    ++E+YE A   L+++++  A +
Sbjct: 1   MNRLAKSIFLS--VFLLAGLAGCSSDDEVPQDMT----EKELYESAQDSLRQESYQNAVK 54

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   FPF   A ++ L   +  Y   + + + +  + +I  +P+  N DY YY+ G
Sbjct: 55  KLQLLEARFPFGPYAEQAQLEIIYAHYLNFESEASIAAADRFIRLHPQHPNADYAYYIKG 114

Query: 139 M-SYAQ----MIRDVPYDQ--RATKLMLQYMS---RIVERYTNSPYVKGARFYVTVGRNQ 188
           + +Y +    + R +P D   R     LQ      +++ RY +SPY   A+  +   R +
Sbjct: 115 LANYVEGEGFLDRFLPTDMTMRDPGAALQSFEDFRQLLYRYPDSPYASDAKARMLYLRAR 174

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           LA  E+ +  YY +RG Y+AA  R + V+ N+       +A+A +V+AY
Sbjct: 175 LARYEINVANYYFERGAYIAAANRGRYVVENFPQTPATADALAVMVQAY 223


>gi|296314699|ref|ZP_06864640.1| competence lipoprotein ComL [Neisseria polysaccharea ATCC 43768]
 gi|296838533|gb|EFH22471.1| competence lipoprotein ComL [Neisseria polysaccharea ATCC 43768]
          Length = 267

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 119/254 (46%), Gaps = 18/254 (7%)

Query: 19  LYKFALTIFFSIAV--CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
           + KF LT+   +A+  C   G   + ++      +T      ++Y +A   L   N+++A
Sbjct: 1   MKKFLLTVSLGLALSACATKGTVDKDAQ------ITQDWSVEKLYAEAQDELNSSNYTRA 54

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            + +      FP +  A++S L +A+  Y   +  +A +  + +   +P+  N+DY  YL
Sbjct: 55  VKLYEILESRFPTSRHAQQSQLDTAYAYYKDDEKDKALAAIDRFRRLHPQHPNMDYALYL 114

Query: 137 VGM-------SYAQMIRDVPY---DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
            G+       S+   +    +   D +A +   Q  + +V+R+ NS Y   A   +    
Sbjct: 115 RGLVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNSKYAADATARMIKLV 174

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
           + L   E+ + RYY+KRG Y+AA  R Q ++ +Y +  + EE++A L  AY  L     A
Sbjct: 175 DALGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESLAILELAYKKLDKPQLA 234

Query: 247 REVVSLIQERYPQG 260
            +   +++  +P+ 
Sbjct: 235 ADTHRVLEANFPKS 248


>gi|293390712|ref|ZP_06635046.1| lipoprotein [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290951246|gb|EFE01365.1| lipoprotein [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 262

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 10/207 (4%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           ++ +Y     +L++ ++S+A  YFN  S  FP +    +  L   +  Y +  Y +    
Sbjct: 32  EQTLYTTGQTYLQDGDYSQAIRYFNAVSNRFPGSSYGEQVQLNLIYAYYKSQDYNETLLT 91

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----QRAT------KLMLQYMSRIV 166
            + +I +YP S ++DY  Y+ G++ + +  +   D     RAT      K        +V
Sbjct: 92  IDRFIQRYPNSSHLDYALYMAGLTNSALGDNFFQDFFGVDRATRENTSIKTAFANFQNLV 151

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
             + NSPY   A   +T  +  LA  E+EI ++Y KR  YVA   R   +L  Y D +  
Sbjct: 152 NHFPNSPYTPDALARMTYIKASLARHELEIAKFYFKRDAYVATANRVVSMLKLYPDTQAT 211

Query: 227 EEAMARLVEAYVALALMDEAREVVSLI 253
            +A+  + E+Y  + L   A +   +I
Sbjct: 212 LDALPLMKESYEKMNLKHLADQTAQVI 238


>gi|121999015|ref|YP_001003802.1| putative lipoprotein [Halorhodospira halophila SL1]
 gi|121590420|gb|ABM63000.1| putative lipoprotein [Halorhodospira halophila SL1]
          Length = 253

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 18/213 (8%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y  A   L   N+S+A E F      +PF   A +S LM  +  Y AG+++ A +  E
Sbjct: 35  ELYTDARSSLSSGNYSQAVERFENLVARYPFGTHAVQSQLMIIYAHYLAGQHESAIAAAE 94

Query: 119 EYITQYPESKNVDYVYYLVGMS-YAQ-------------MIRDVPYDQRATKLMLQYMSR 164
            +   +P +++V Y  Y+ G+S  AQ              +RD    +RA          
Sbjct: 95  RFQRMHPRNEHVAYALYMRGVSRQAQGPGGLGDLFNVDANLRDPEPKRRA----FADFRE 150

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           + E+Y +S Y+  A   +   R  LA  E+ +GR+YL+R  Y+A+  R + ++A Y    
Sbjct: 151 LTEQYPDSEYIDDAVERMEQIRVALAEHELYVGRFYLERSAYIASANRARTIIARYPGTP 210

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
              EAM  L E+Y  L L     +V   ++ER+
Sbjct: 211 AVPEAMGMLAESYRRLGLDPLDEDVERALRERH 243


>gi|227357803|ref|ZP_03842151.1| DNA uptake lipoprotein ComL [Proteus mirabilis ATCC 29906]
 gi|227161913|gb|EEI46931.1| DNA uptake lipoprotein ComL [Proteus mirabilis ATCC 29906]
          Length = 241

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 12/206 (5%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y  +   L + N+  A +        +PF   +++  L   +  Y + +   A S  +
Sbjct: 32  ELYATSQEKLLDGNYGAAIKQLESLDNRYPFGPYSQQVQLDLIYAYYKSAELPMAISAID 91

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPY-----------DQRATKLMLQYMSRIVE 167
            ++   P   N+DYV Y+ G++ AQ + D              D +  ++  +  S++V 
Sbjct: 92  RFMRLNPTHPNIDYVLYMRGLT-AQALDDSALQGFFGIDRSDRDPQHARVAFKDFSQLVR 150

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y +S Y   A   +   +N+LA  E+ + ++Y KRG YVA I R + ++ +Y D E   
Sbjct: 151 YYPDSLYTADATKRLVFLKNRLAKYELSVAKFYTKRGAYVAVINRVEQMMRDYPDTEATR 210

Query: 228 EAMARLVEAYVALALMDEAREVVSLI 253
           EA+  +  AY  L L  EA +V SLI
Sbjct: 211 EALVYMENAYKKLGLTQEADKVASLI 236


>gi|261867119|ref|YP_003255041.1| lipoprotein [Aggregatibacter actinomycetemcomitans D11S-1]
 gi|261412451|gb|ACX81822.1| lipoprotein [Aggregatibacter actinomycetemcomitans D11S-1]
          Length = 262

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 10/207 (4%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           ++ +Y     +L++ ++S+A  YFN  S  FP +    +  L   +  Y +  Y +    
Sbjct: 32  EQTLYTTGQTYLQDGDYSQAIRYFNAVSNRFPGSSYGEQVQLNLIYAYYKSQDYSETLLT 91

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----QRAT------KLMLQYMSRIV 166
            + +I +YP S ++DY  Y+ G++ + +  +   D     RAT      K        +V
Sbjct: 92  IDRFIQRYPNSSHLDYALYMAGLTNSALGDNFFQDFFGVDRATRENTSIKTAFANFQNLV 151

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
             + NSPY   A   +T  +  LA  E+EI ++Y KR  YVA   R   +L  Y D +  
Sbjct: 152 NHFPNSPYTPDALARMTYIKASLARHELEIAKFYFKRDAYVATANRVVSMLKLYPDTQAT 211

Query: 227 EEAMARLVEAYVALALMDEAREVVSLI 253
            +A+  + E+Y  + L   A +   +I
Sbjct: 212 LDALPLMKESYEKMNLKHLADQTAKVI 238


>gi|311104862|ref|YP_003977715.1| competence lipoprotein ComL [Achromobacter xylosoxidans A8]
 gi|310759551|gb|ADP15000.1| competence lipoprotein ComL [Achromobacter xylosoxidans A8]
          Length = 280

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 10/211 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y  A   +    + +A E        +PF   A+++LL  A+V +  G+ +QA +  +
Sbjct: 51  QLYADAKAEMSSGGWKEARERLTAIESRYPFGVYAQQALLELAYVNWKDGENEQALAAID 110

Query: 119 EYITQYPESKNVDYVYYLVG----------MSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
            +   YP     DY  YL G          MS          D +  +      + +++R
Sbjct: 111 RFQQLYPNHPGTDYALYLKGLINFTPASAFMSSITGQDPAERDPKGLRASYDAFNELIKR 170

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y +S Y   A   V    N +A  EV + RYY +RG YVAA  R Q V+ ++  A   EE
Sbjct: 171 YPDSKYTVDAEKRVAWLVNTIAMNEVHVARYYYERGAYVAAANRAQTVITDFEGAPATEE 230

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           A+  +VE+Y  L + +   +   +  + +P 
Sbjct: 231 ALYLMVESYDKLGMTELKNDSQRVYDKNFPN 261


>gi|294669552|ref|ZP_06734619.1| hypothetical protein NEIELOOT_01451 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308465|gb|EFE49708.1| hypothetical protein NEIELOOT_01451 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 268

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 116/252 (46%), Gaps = 13/252 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K  L +   IA+      +  S +D  +     V    ++Y +A   L   N+++A +
Sbjct: 1   MKKILLVVALGIALGGCAANKGTSDKDAQITQDWPVE---KLYAEAQDELNSSNYTRAVK 57

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            +      FP    A+++ L +A+  Y   + ++A +  E +   +P+  N+DY  YL G
Sbjct: 58  LYELLESRFPQGRYAQQAQLDTAYAYYKDEEREKALAAVERFQRLHPQHPNMDYALYLKG 117

Query: 139 M-------SYAQMIRDVPY---DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +       S+   +    +   D +A +   Q  + +V+RY  S YV+ A   +    + 
Sbjct: 118 LILFNEDKSFLNKLASQDWSDRDPKANREAYQAFAELVQRYPQSKYVEEASKQMEKLVDA 177

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E+ + RYY KRG ++AA  R Q ++  + +    EEA+A +  +Y  +     A +
Sbjct: 178 LAGNEISVARYYAKRGAHLAAANRAQNIITGFQNTRFTEEALAIMEVSYRKMNRQQLADD 237

Query: 249 VVSLIQERYPQG 260
              ++Q+ +PQ 
Sbjct: 238 TRRILQQNFPQS 249


>gi|303326797|ref|ZP_07357239.1| putative competence protein [Desulfovibrio sp. 3_1_syn3]
 gi|302862785|gb|EFL85717.1| putative competence protein [Desulfovibrio sp. 3_1_syn3]
          Length = 243

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 104/214 (48%), Gaps = 18/214 (8%)

Query: 22  FALTI-FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           F L +  F+++ C ++         +YL    D    +E++E A   + E+N+ +A E +
Sbjct: 9   FVLAVSLFAVSGCGIIDM-------IYLPPAEDT--AQEIFEAANDAMSEKNYVRAVELY 59

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
           N+    +PF+     + L      +   +Y+ AA   +++ + +P  + + YV Y  GMS
Sbjct: 60  NKLRDTYPFSPYTIDAELSLGDAYFLDEEYELAAETYKDFESLHPRHEAIPYVLYQTGMS 119

Query: 141 YAQMIRDVPYDQRATKLM--LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
             +  R +  D+  T+L     Y +R+ + Y +SPY KGA  ++   R  +A  E+ I  
Sbjct: 120 LMKQFRSI--DRATTELQEAYDYFNRLSQMYPDSPYAKGAEEHMHTCRKLMAEHELYIAD 177

Query: 199 YYLKRGEYVAAIPRFQLVLANYSD----AEHAEE 228
            +    +Y  A  R++ ++ N+ D    AEHA+E
Sbjct: 178 VFWHMKKYGPAWRRYEFIMENFKDVPEVAEHAKE 211


>gi|71282332|ref|YP_270574.1| putative lipoprotein [Colwellia psychrerythraea 34H]
 gi|71148072|gb|AAZ28545.1| putative lipoprotein [Colwellia psychrerythraea 34H]
          Length = 252

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 111/250 (44%), Gaps = 14/250 (5%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           K  + I  ++    L G    SS +  +D V D   Q  ++  A   L    + KA +  
Sbjct: 3   KLTVKIILTVLALALTGC---SSSENDIDKVPDKSAQ-SLFVDARTALDNGLYQKAIQIL 58

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY---LV 137
                 FPF  ++ +  L   +  Y +G   Q  +L + ++   P + N+DYVYY   L+
Sbjct: 59  GAIDSRFPFGPISHQVQLDLIYAYYKSGDAAQGIALADRFLRLNPNNSNIDYVYYMRALI 118

Query: 138 GMSYAQ-MIRDV------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
            +S  + + +D+        D  A++        IV  Y +S Y   +R  +   +++LA
Sbjct: 119 NISTEENLFQDLAGIDRSDRDPEASRSAFNDFKSIVTDYPDSKYAADSRKRMISIKSRLA 178

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
             E+ + +YY+KR  Y +A  R + V+  +S +   E+A+  ++  Y  L L D  +  +
Sbjct: 179 QYEIAVAKYYVKREAYASAANRARYVVEYFSPSPEIEQALEIMINCYDKLGLADLKKNAL 238

Query: 251 SLIQERYPQG 260
            ++   YP  
Sbjct: 239 QVLAANYPNN 248


>gi|261364921|ref|ZP_05977804.1| competence lipoprotein ComL [Neisseria mucosa ATCC 25996]
 gi|288566704|gb|EFC88264.1| competence lipoprotein ComL [Neisseria mucosa ATCC 25996]
          Length = 268

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 102/212 (48%), Gaps = 10/212 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L   N+++A + +      FP    A+++ L +A+  Y   + ++A +  +
Sbjct: 38  KLYAEAHDELNSSNYTRAIKLYEILESRFPNGRYAQQAQLDTAYAYYKDDEPEKALAAID 97

Query: 119 EYITQYPESKNVDYVYYLVGM-------SYAQMIRDVPY---DQRATKLMLQYMSRIVER 168
            +   +P+  N+DY  YL G+       S+   +    +   D +A +   Q  + +V+R
Sbjct: 98  RFQRHHPQHPNMDYALYLKGLVLFNEDQSFLNKLASQDWSDRDPKANRSAYQAFAELVQR 157

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y  S Y   A   +    + L   E+ + RYY+KRG Y+AA+ R Q ++  Y +  + EE
Sbjct: 158 YPESKYAADATERMAKLVDALGGNEISVARYYMKRGAYLAAVNRAQKIVERYQNTRYVEE 217

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           A+A +  AY  L     A +   +++  +PQ 
Sbjct: 218 ALAMMELAYKKLDKPQLAADTRRVLETNFPQS 249


>gi|117621430|ref|YP_858499.1| ComL family lipoprotein [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|117562837|gb|ABK39785.1| lipoprotein, ComL family [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 305

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 97/216 (44%), Gaps = 12/216 (5%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y+KA L L   N+  A E        +PF   + +  L   +  Y      QA +  + 
Sbjct: 90  LYQKARLKLDAGNYLNAIELLEALDSRYPFGAYSNQVQLDLIYAYYKQDDTAQAIANIDR 149

Query: 120 YITQYPESKNVDYVYYLVGMS-----------YAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +I   P  KN+DYV+Y+ G++           +  + RD   D    +   Q    +++ 
Sbjct: 150 FIRLNPAHKNIDYVFYMRGLTNMAGDYNFFQDFLGINRD-DKDPSYARQAFQDFKTLLQN 208

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS Y   AR  +   +N+LA  ++ +  YY+KR   +AA  R +L++  Y D    E+
Sbjct: 209 YPNSVYAADARARMIGLKNRLARYDLSVAEYYVKRDALIAAANRAKLIVETYPDTAETEK 268

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
           A+  ++ +Y +L +   A+    ++ + YP     R
Sbjct: 269 ALEIMINSYDSLKMPTLAQHAREVLAKNYPDNRLGR 304


>gi|119946872|ref|YP_944552.1| putative lipoprotein [Psychromonas ingrahamii 37]
 gi|119865476|gb|ABM04953.1| putative lipoprotein [Psychromonas ingrahamii 37]
          Length = 257

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 104/211 (49%), Gaps = 10/211 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +YE+A   L+  +F KA +        +PF   + +  L   +  Y  G+     +  + 
Sbjct: 39  LYEQAKQALESASFEKASDILEALDTRYPFGPHSDQVQLDLIYAYYKRGETAFTLANIDR 98

Query: 120 YITQYPESKNVDYVYYLVGMSY----AQMIRDV------PYDQRATKLMLQYMSRIVERY 169
           ++   P   ++DY+YY+ G++Y     Q  +D+        D        + +SRI++ Y
Sbjct: 99  FLRLNPTHPDLDYIYYMRGLTYISADQQFFQDLFGIDRYNRDPNNAIQAFKDLSRIIKYY 158

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
            +S Y   A+  +   +++LA  E+ I ++YLKR  Y+AAI R ++VL NY D    E+A
Sbjct: 159 PSSEYAVDAQQRIIDLKDRLARYEIGIAQWYLKREAYIAAINRCKIVLNNYPDMPAVEQA 218

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260
           +  ++ +Y  L + +     +++++  YP+ 
Sbjct: 219 LEIMIASYNVLGIEEPKMNALAVLKLNYPKN 249


>gi|317401791|gb|EFV82406.1| competence lipoprotein [Achromobacter xylosoxidans C54]
          Length = 262

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 104/248 (41%), Gaps = 19/248 (7%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
            AL    +IA C         S +   D  T+   + ++Y  A   +    + +A E   
Sbjct: 5   IALFAVIAIAGC--------GSTNSKYDKTTNWSAE-QLYADAKAEISSGGWKEARERLT 55

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG--- 138
                +PF   A+++LL  A+V +  G+ +QA +  + +   YP     DY  YL G   
Sbjct: 56  AIESRYPFGVYAQQALLELAYVNWKDGENEQALAAIDRFQQLYPNHPGTDYALYLKGLIN 115

Query: 139 -------MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
                  MS          D +  +      + +++RY  S Y   A   V    N +A 
Sbjct: 116 FTPASAFMSSITGQDPAERDPKGLRASYDAFNDLIKRYPESKYTPDAEKRVAWLVNTIAM 175

Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
            EV + RYY +RG Y+AA  R Q V+ ++  A   EEA+  +V++Y  L + +   +   
Sbjct: 176 NEVHVARYYYERGAYIAAANRAQTVITDFEGAPATEEALYLMVQSYDKLGMTELKNDSQR 235

Query: 252 LIQERYPQ 259
           +  + +P 
Sbjct: 236 VFDKNFPN 243


>gi|329120442|ref|ZP_08249107.1| competence lipoprotein ComL [Neisseria bacilliformis ATCC BAA-1200]
 gi|327461900|gb|EGF08230.1| competence lipoprotein ComL [Neisseria bacilliformis ATCC BAA-1200]
          Length = 267

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 103/212 (48%), Gaps = 10/212 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L   N+++A + +      FP    A+++ L +A+  Y   + ++A +  E
Sbjct: 37  KLYAEAQDELNSSNYTRAVKLYELLESRFPQGRYAQQAQLDTAYAYYKDEEREKALAAVE 96

Query: 119 EYITQYPESKNVDYVYYLVGM-------SYAQMIRDVPY---DQRATKLMLQYMSRIVER 168
            +   +P+  N+DY  YL G+       S+   +    +   D +A +   Q  S +V+R
Sbjct: 97  RFQKLHPQHPNMDYALYLKGLILFNEDPSFLNKLAAQDWSDRDPKANREAYQAFSELVQR 156

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y  S YV+ A   +    + LA  E+ + RYY KRG Y+AA  R Q ++  + +    EE
Sbjct: 157 YPQSKYVEDASARMAKLVDALAGNEMAVARYYAKRGAYLAAANRAQNIVTGFQNTRFVEE 216

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           A+A +  +Y  +     A +   ++Q+ +PQ 
Sbjct: 217 ALAIMELSYQKMGRPQLAEDTRRILQQNFPQS 248


>gi|261377889|ref|ZP_05982462.1| competence lipoprotein ComL [Neisseria cinerea ATCC 14685]
 gi|269145742|gb|EEZ72160.1| competence lipoprotein ComL [Neisseria cinerea ATCC 14685]
          Length = 267

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 103/212 (48%), Gaps = 10/212 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L   N+++A + +      FP +  A++S L +A+  Y   +  +A +  +
Sbjct: 37  KLYAEAQDELNSSNYTRAVKLYEILESRFPTSRHAQQSQLDTAYAYYKDDEKDKALAAID 96

Query: 119 EYITQYPESKNVDYVYYLVGM-------SYAQMIRDVPY---DQRATKLMLQYMSRIVER 168
            +   +P+  N+DY  YL G+       S+   +    +   D +A +   Q  + +V+R
Sbjct: 97  RFRRLHPQHPNMDYALYLRGLVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQR 156

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           + NS Y   A   +    + L   E+ + RYY+KRG Y+AA  R Q ++ +Y +  + EE
Sbjct: 157 FPNSKYAADATARMIKLVDALGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEE 216

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           ++A L  AY  L     A +   +++  +P+ 
Sbjct: 217 SLAILELAYKKLDKPQLAADTHRVLEANFPKS 248


>gi|238897771|ref|YP_002923450.1| outer membrane protein assembly complex subunit, DNA uptake
           lipoprotein [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|229465528|gb|ACQ67302.1| outer membrane protein assembly complex subunit, DNA uptake
           lipoprotein [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 242

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 18/209 (8%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y  A   L E NF +A          FPF G +++  L   +  Y + +   A +  +
Sbjct: 34  ELYAVAQKALSEGNFREAITQLEALDTRFPFGGYSQQVQLDLIYAYYKSDQLALAQASID 93

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMI--------------RDVPYDQRATKLMLQYMSR 164
            +I   P S N+DYV YL G++   +               RD  +  RA +   Q    
Sbjct: 94  RFIRLNPTSPNIDYVLYLRGLTEMGLDENQLQNFFGVDRSDRDPEHALRAFRDFQQ---- 149

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +++ + NS Y+  A+  +   +++LA  E+ + +YY+KR  YVA I R + +L NY D +
Sbjct: 150 LIQYHPNSTYLADAQKRLIFLKDRLATHELAVVQYYIKREAYVAVINRVEEMLKNYPDTQ 209

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLI 253
               A+  + +AY  L L ++A +V  LI
Sbjct: 210 ATRTALPLMEQAYRKLQLHEQADKVAKLI 238


>gi|325577680|ref|ZP_08147955.1| competence lipoprotein ComL [Haemophilus parainfluenzae ATCC 33392]
 gi|325160425|gb|EGC72551.1| competence lipoprotein ComL [Haemophilus parainfluenzae ATCC 33392]
          Length = 273

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 103/236 (43%), Gaps = 22/236 (9%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
           F+IA C         +++V   SV D+      Y K    L+E ++S +  Y    +  F
Sbjct: 25  FAIAAC------SSGNKEVEQASVDDL------YAKGAAALQEGSYSDSIRYLKAATERF 72

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY----AQ 143
           P +    +++L   +  Y    Y       + Y+ Q+P+S N DY  Y+ G++       
Sbjct: 73  PGSTYQEQAMLDLIYANYKTQDYTATLVTVDNYLHQFPQSPNRDYAVYMAGLTNLATADN 132

Query: 144 MIRDVPYDQRAT------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
           MI+D     RAT      K        +V  + NSPY + A   +   ++ LA  E+EI 
Sbjct: 133 MIQDFFGIDRATRETTSMKTAFSNFQSLVRAFPNSPYSQDAVARMAYIKDSLARHELEIA 192

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           ++Y KR  +VA   R   +L  Y DA+   E +  + EAY  + L   A +   +I
Sbjct: 193 KFYAKRDAWVAVANRVVGMLQQYPDAKATYEGLFLMKEAYEKMGLQQLASQTQQVI 248


>gi|15676601|ref|NP_273745.1| competence lipoprotein [Neisseria meningitidis MC58]
 gi|18203154|sp|Q9K0B1|COML_NEIMB RecName: Full=Competence lipoprotein ComL; Flags: Precursor
 gi|7225932|gb|AAF41120.1| competence lipoprotein ComL [Neisseria meningitidis MC58]
 gi|316983680|gb|EFV62661.1| competence lipoprotein comL [Neisseria meningitidis H44/76]
 gi|325200612|gb|ADY96067.1| competence lipoprotein comL [Neisseria meningitidis H44/76]
          Length = 267

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 103/212 (48%), Gaps = 10/212 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L   N+++A + +      FP +  A++S L +A+  Y   +  +A +  +
Sbjct: 37  KLYAEAQDELNSSNYTRAVKLYEILESRFPTSRHAQQSQLDTAYAYYKDDEKDKALAAID 96

Query: 119 EYITQYPESKNVDYVYYLVGM-------SYAQMIRDVPY---DQRATKLMLQYMSRIVER 168
            +   +P+  N+DY  YL G+       S+   +    +   D +A +   Q  + +V+R
Sbjct: 97  RFRRLHPQHPNMDYALYLRGLVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQR 156

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           + NS Y   A   +    + L   E+ + RYY+KRG Y+AA  R Q ++ +Y +  + EE
Sbjct: 157 FPNSKYAADATARMVKLVDALGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEE 216

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           ++A L  AY  L     A +   +++  +P+ 
Sbjct: 217 SLAILELAYKKLDKPRLAADTRRVLETNFPKS 248


>gi|85711026|ref|ZP_01042086.1| Competence lipoprotein ComL [Idiomarina baltica OS145]
 gi|85694939|gb|EAQ32877.1| Competence lipoprotein ComL [Idiomarina baltica OS145]
          Length = 252

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 101/211 (47%), Gaps = 10/211 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +YE A   +   NF++A E  +  +  +PF   A +  L   ++ Y     ++A +  + 
Sbjct: 37  MYESAQDQMSLGNFTQAEEELSNINSRYPFGPFAHQVQLDLIYLNYKLDNTEKALAAIDR 96

Query: 120 YITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERY 169
           +I+  P  K+VDY  Y+ G++  +           +     D    K   +  + ++ +Y
Sbjct: 97  FISLNPNHKDVDYALYMRGLTNQRAEYNAIHELAGVDRSDRDSTMAKEAFKDFAELLRKY 156

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
             S Y   A+  +   +++LA KE+ + +YY+KR  Y+AA  R + V+ N+ +    E A
Sbjct: 157 PESKYAADAKKRMIAIKSRLAKKELAVAQYYMKRQAYLAAANRGRYVVENFENTPEVESA 216

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260
           +A +VE Y  L L +  ++ + +++  +P  
Sbjct: 217 LAMMVECYDQLELEELKQDTLKVLRSNFPNN 247


>gi|238760704|ref|ZP_04621825.1| hypothetical protein yaldo0001_36270 [Yersinia aldovae ATCC 35236]
 gi|238701077|gb|EEP93673.1| hypothetical protein yaldo0001_36270 [Yersinia aldovae ATCC 35236]
          Length = 240

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 104/233 (44%), Gaps = 15/233 (6%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
           A   LV     S++DV  D+        E+Y  A   L++ NF  A          +PF 
Sbjct: 8   ATLSLVLTGCSSNKDVVPDNPP-----SELYATAQQKLQDGNFKGAITQLEALDNRYPFG 62

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM------ 144
             +++  L   +  Y +     A +  + ++   P   N+DYV Y+ G++   +      
Sbjct: 63  PYSQQVQLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVLYMRGLTDMALDDSALQ 122

Query: 145 ----IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
               I     D +  K   +  +++++ Y NS Y   A+  +   +N+LA  E+ + +YY
Sbjct: 123 GFFGIDRSDRDPQHAKAAFRDFNQLIQSYPNSQYATDAQKRLVFLKNRLAKHELAVAQYY 182

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            KRG YVA + R + +L +Y D +   +A+  +  AY  L L  EA +V  +I
Sbjct: 183 TKRGAYVAVVNRVEQMLRDYPDTQATHDALPLMENAYKQLQLNAEADKVAKII 235


>gi|88608266|ref|YP_506787.1| putative competence protein ComL [Neorickettsia sennetsu str.
           Miyayama]
 gi|88600435|gb|ABD45903.1| putative competence protein ComL [Neorickettsia sennetsu str.
           Miyayama]
          Length = 219

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 2/211 (0%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
           +C L G     S+ +  + V +   +  +Y  AVL L+++N+  A E F + +   PF+ 
Sbjct: 6   LCVLSGCGVGKSKKILNNKVRED--ELSMYNSAVLSLEKKNYKVAKELFEKVADIAPFSS 63

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
           +  K+      + Y  GK+  AA   E Y+  YP+ + +D V  + G +Y QM +     
Sbjct: 64  IGEKAKASYTKILYDEGKFAAAAGSAEGYLLDYPDGEKMDQVLNIKGNAYFQMSKGCTNS 123

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
                      + +++ +  S YV  A+  +      +A K   IG +Y K   Y AAI 
Sbjct: 124 SEFADKARDAFTVLIQTFPASEYVTDAQKKLLEIDEIMAEKIFSIGSFYFKEMSYHAAIA 183

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
           RF  ++ +YS  +  + A+++  EAY  L +
Sbjct: 184 RFDELIRDYSRTKLYDAAVSKRAEAYKMLGI 214


>gi|268593136|ref|ZP_06127357.1| competence lipoprotein ComL [Providencia rettgeri DSM 1131]
 gi|291311409|gb|EFE51862.1| competence lipoprotein ComL [Providencia rettgeri DSM 1131]
          Length = 243

 Score = 76.6 bits (187), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 104/230 (45%), Gaps = 17/230 (7%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
            LVG    S+ +V  DS        E+Y      L++ NF  A + F      +PF   A
Sbjct: 16  ILVGCS--STPEVSPDSTP-----AEIYATGQQKLQDGNFKAAIKQFEALDNRYPFGPYA 68

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM--------- 144
           ++  L   +  Y + +   A +  + ++   P   N+DYV Y+ G++   +         
Sbjct: 69  QQVQLDLIYAYYKSAELPMAIAAIDRFMRLNPTHPNIDYVLYMRGLTAMALDDSLLQGLF 128

Query: 145 -IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
            I     D +  ++  +  S++V  Y NS Y   A   +   +++LA  ++ +  YY KR
Sbjct: 129 GIDRSDRDPQHARVAFKDFSQLVRYYPNSLYSNDASKRLVFLKDRLAKFDLSVVEYYNKR 188

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           G YVA + R Q +L +Y D E    A+A +  AY  + L  EA +V S+I
Sbjct: 189 GAYVAVVNRVQQMLKDYPDTEATRNALAYMEIAYNEMGLNQEANKVASII 238


>gi|149377767|ref|ZP_01895500.1| DNA uptake lipoprotein [Marinobacter algicola DG893]
 gi|149357939|gb|EDM46428.1| DNA uptake lipoprotein [Marinobacter algicola DG893]
          Length = 292

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 104/222 (46%), Gaps = 10/222 (4%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D   +V  ++  YE A   +   NF++A +  +     +PF   A ++ L   + +Y   
Sbjct: 38  DKQEEVLPEQTYYENARDAMNSGNFNEAEQNLDYLETYYPFGRYAEQAQLDLIYARYQNL 97

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQMI----RDVPYDQRA-----TKLM 158
             + A +  + ++   P+S + DY  Y+ G+ SY   I    R  P D  A      +  
Sbjct: 98  DLEGARAAADRFLRLNPQSDHADYALYMRGLASYNLDIGLAARYFPVDVSARDPGEQRQA 157

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
            Q  S ++ RY +S Y   AR  +   RN+LA  E+   RYY+ R  Y+AA  R + ++ 
Sbjct: 158 FQDFSELLNRYPSSEYAPDARQRMIAIRNRLAELELYAARYYISREAYIAANNRARYIIE 217

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           NYS     EEA+  L E +  + L   A + V++++E +P  
Sbjct: 218 NYSTTPSVEEALIILAETFRFMDLKKGATDAVAMLKENFPDS 259


>gi|255065279|ref|ZP_05317134.1| competence lipoprotein ComL [Neisseria sicca ATCC 29256]
 gi|255050700|gb|EET46164.1| competence lipoprotein ComL [Neisseria sicca ATCC 29256]
          Length = 268

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 102/212 (48%), Gaps = 10/212 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L   N+++A + +      FP    A+++ L +A+  Y   + ++A +  +
Sbjct: 38  KLYAEAHDELNSSNYTRAIKLYEILESRFPNGRYAQQAQLDTAYAYYKDDEPEKALAAID 97

Query: 119 EYITQYPESKNVDYVYYLVGM-------SYAQMIRDVPY---DQRATKLMLQYMSRIVER 168
            +   +P+  N+DY  YL G+       S+   +    +   D +A +   Q  + +V+R
Sbjct: 98  RFQRHHPQHPNMDYALYLKGLVLFNEDQSFLNKLASQDWSDRDPKANRSAYQAFAELVQR 157

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y  S Y   A   +    + L   E+ + RYY+KRG Y+AA+ R Q ++  Y +  + EE
Sbjct: 158 YPESKYAADATERMAKLVDALGGNEISVARYYMKRGAYLAAVNRAQKIVERYQNTRYVEE 217

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           ++A +  AY  L     A +   +++  +PQ 
Sbjct: 218 SLAMMELAYKKLDKPQLAADTRRVLETNFPQS 249


>gi|134095126|ref|YP_001100201.1| TPR repeat-containing protein [Herminiimonas arsenicoxydans]
 gi|133739029|emb|CAL62077.1| Competence lipoprotein ComL precursor [Herminiimonas
           arsenicoxydans]
          Length = 261

 Score = 76.3 bits (186), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 113/243 (46%), Gaps = 17/243 (6%)

Query: 30  IAVCFLVGWERQSSRDVYLDSVTDVRY--QREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
           IA+ FL+     S+  +  D + + +     ++Y +A   +   N+ KA  +F +    +
Sbjct: 7   IALAFLL-----SACSLTPDQIDETKNWSPSKLYSEAREEMNTGNYEKAVSHFEKLESRY 61

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-------- 139
           PF   A+++ +  A+  Y  G   QA +  E +I  +P+  NVDY+YYL G+        
Sbjct: 62  PFGTYAQQAQMEIAYAYYRQGDQPQALAAVERFIKLHPDHPNVDYMYYLRGLINFNDKVS 121

Query: 140 SYAQMIRDVPY--DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
            +  + R  P   D +A +        + ER+ +S Y   A   +    N +A  +V + 
Sbjct: 122 VFDFLSRQDPTERDPKAAREAFDSFKLLTERFPDSKYTPDASARLAYLVNAMAQYDVHVA 181

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
            YY +RG Y+AA  R Q  + NY  A  AE A+  ++++Y AL L     +   +++  +
Sbjct: 182 NYYYRRGAYLAAANRAQAAVKNYPGAPAAEGALYVMIQSYDALNLPQLRDDAERVMKTNF 241

Query: 258 PQG 260
           P  
Sbjct: 242 PNS 244


>gi|330974765|gb|EGH74831.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 174

 Score = 75.9 bits (185), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 84/166 (50%), Gaps = 10/166 (6%)

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQ-- 143
           +PF   A ++ L   +  Y  G+ + A S  E +I  +P+  NVDY YY+ G+ S+ Q  
Sbjct: 9   YPFGRYADQAQLELIYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDV 68

Query: 144 --MIRDVPYDQR-----ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
             + R +P DQ      A +      +++  R+ NS Y   A+  +   RN LA+ E+ +
Sbjct: 69  GLLARFLPLDQTKRDPGAARDSFNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIHV 128

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
             YYL R  YVAA  R + V+ N+ +     + +A +VE+Y  L L
Sbjct: 129 ADYYLTRQAYVAAANRGRYVVENFQETPSVGDGLAVMVESYQRLHL 174


>gi|212712903|ref|ZP_03321031.1| hypothetical protein PROVALCAL_04000 [Providencia alcalifaciens DSM
           30120]
 gi|212684448|gb|EEB43976.1| hypothetical protein PROVALCAL_04000 [Providencia alcalifaciens DSM
           30120]
          Length = 239

 Score = 75.9 bits (185), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 10/205 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y      L++ N++ A + F      +PF   A++  L   +  Y + +   A +  +
Sbjct: 31  EIYSTGQQKLQDGNYNAAIKQFEALDNRYPFGPYAQQVQLDLIYAYYKSAELPMAIASID 90

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168
            ++   P   N+DYV Y+ G++   +          I     D +   +  + +S++V  
Sbjct: 91  RFMRLNPTHPNIDYVLYMRGLTAMALDDSMLQGFFGIDRSDRDPQHALVAFKDLSQLVRY 150

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NSPY   A   +   +++LA  ++ +  YY KRG YVA + R Q +L +Y D E   +
Sbjct: 151 YPNSPYSNDASKRLVYLKDRLAKFDLSVVEYYNKRGAYVAVVNRVQQMLRDYPDTEATRQ 210

Query: 229 AMARLVEAYVALALMDEAREVVSLI 253
           A+  +  AY  + L  EA +V S+I
Sbjct: 211 ALTYMEIAYKEMGLDKEANKVGSII 235


>gi|326796214|ref|YP_004314034.1| outer membrane assembly lipoprotein YfiO [Marinomonas mediterranea
           MMB-1]
 gi|326546978|gb|ADZ92198.1| outer membrane assembly lipoprotein YfiO [Marinomonas mediterranea
           MMB-1]
          Length = 280

 Score = 75.9 bits (185), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/221 (23%), Positives = 109/221 (49%), Gaps = 13/221 (5%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           ++E Y+KA   L     + A ++    +  +PF   + ++ L   + QY +G Y  + + 
Sbjct: 35  EQEYYDKAQEALDNGLPATAVKHLKDLTARYPFGDFSTRAELDLIYAQYESGDYIASHAT 94

Query: 117 GEEYITQYPESKNVDYVYYLVGMS--------YAQMIRDVPYDQRATKLMLQY--MSRIV 166
            E +I  + +S  +DY YY+ G+S          + +   P ++ A +    +   +  +
Sbjct: 95  AERFIRNHLDSDALDYAYYMRGLSTYKGAETFLGRYLDLNPAERDAHEFEKAFGEFADFL 154

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
            R+  SPY   A+  +   RN +A  E+++  YY KR   ++A+ R Q V+ +Y  +   
Sbjct: 155 ARFPKSPYAVDAKARMIYLRNTVADHELQVAHYYFKRHAPISALRRAQEVIQHYPSSNSV 214

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
           EEA+A  ++AY+ +   + A+  + ++ + YP    ++Y++
Sbjct: 215 EEAIAVTIQAYLNMEQYELAKTNLGVLTKNYPN---SKYID 252


>gi|59711170|ref|YP_203946.1| lipoprotein component of outer membrane protein assembly complex
           [Vibrio fischeri ES114]
 gi|197334835|ref|YP_002155321.1| competence lipoprotein ComL [Vibrio fischeri MJ11]
 gi|59479271|gb|AAW85058.1| lipoprotein component of outer membrane protein assembly complex
           [Vibrio fischeri ES114]
 gi|197316325|gb|ACH65772.1| competence lipoprotein ComL [Vibrio fischeri MJ11]
          Length = 241

 Score = 75.9 bits (185), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 106/240 (44%), Gaps = 17/240 (7%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           LTI   +AV  LVG    SS D   D + D+    E+Y +A + L+  N++ A E     
Sbjct: 4   LTISSLLAVSLLVGC---SSSD---DVIPDIP-PSELYAQAQVSLQAGNWTSAIERLEAL 56

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +PF   + +  L   +V Y         +  E +    P     D+V Y+ G+++  
Sbjct: 57  DSRYPFGAYSEQVQLDLIYVYYKNDDLALGLATIERFTRLNPTHPKADWVLYMRGLTHMA 116

Query: 144 MIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
             R   +D              +   +   R++ERY NS Y + A+  +   +N+LA  E
Sbjct: 117 QDRSFMHDLFRVDRSDRDPEPARSAFKDFKRLLERYPNSLYAEDAQTRMYALKNRLADYE 176

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +    +YL+R  +++AI R Q +   Y D E A +++  ++ AY  L L D  +    LI
Sbjct: 177 LATADFYLRREAWISAINRCQELQRTYPDTEAARKSLTIMLSAYKELKLEDAIKRTEELI 236


>gi|303257042|ref|ZP_07343056.1| competence lipoprotein ComL [Burkholderiales bacterium 1_1_47]
 gi|302860533|gb|EFL83610.1| competence lipoprotein ComL [Burkholderiales bacterium 1_1_47]
          Length = 283

 Score = 75.9 bits (185), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 104/218 (47%), Gaps = 10/218 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L E N+  A +Y+ +    +P+   ++++ + +A+  +  G+ QQA ++ +
Sbjct: 45  KLYVEARDNLNEGNYETARDYYQKLEARYPYGRYSQQAQVETAYSYFKEGEPQQAIAVCD 104

Query: 119 EYITQYPESKNVDYVYYLVG----------MSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
            ++ QYPE     Y  Y+ G          MSY         D +A +        +V R
Sbjct: 105 RFLRQYPEHPLSPYALYIKGIATLDEDEGWMSYLTRQDLSKRDAQAARDAFDIFKELVLR 164

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           + NS Y + AR  +       A  E+   +YY  R  Y+AAI R + VL N+  +  AEE
Sbjct: 165 FPNSRYARDARERMHELVEAQAKYEINTAKYYYVRDAYIAAINRAENVLLNFQTSPQAEE 224

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
           A+  + ++Y  L + D+A ++  ++     +G +  Y+
Sbjct: 225 ALIIMRDSYNKLGMDDKAADIQRILDANKNRGSYDTYL 262


>gi|134301740|ref|YP_001121708.1| lipoprotein [Francisella tularensis subsp. tularensis WY96-3418]
 gi|134049517|gb|ABO46588.1| hypothetical lipoprotein [Francisella tularensis subsp. tularensis
           WY96-3418]
          Length = 274

 Score = 75.9 bits (185), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 10/211 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y KA   ++ Q +  A   +      +PF  +A K ++   +V Y   +   A +LG++
Sbjct: 40  IYAKAHEQMQNQKYFDAIRSYKSLVAQYPFTPLAEKGMVDLIYVYYMDDESTMALALGQQ 99

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDV-----PYD---QRATKLMLQYMS--RIVERY 169
           +I  +P S    YVYY++G+   +  R +     PYD      T     Y +  + ++  
Sbjct: 100 FIKMHPYSIYKGYVYYMIGVVGFEDGRGMLQTYAPYDMNYHDPTGYQDAYTNFEKAIQLD 159

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
               +V  A+  +    N +A    +I  +Y KRG Y AAI R   V+ NY  +   E+A
Sbjct: 160 PTGSFVPDAKRRMIFINNIIARHYDDIAHFYFKRGAYNAAIDRASQVIRNYPQSTSTEDA 219

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260
           +   + AY  L L D+A+  + ++++ YP+ 
Sbjct: 220 LVLTIRAYNKLGLYDQAKANIRVLKKNYPKN 250


>gi|317493977|ref|ZP_07952394.1| outer membrane assembly lipoprotein YfiO [Enterobacteriaceae
           bacterium 9_2_54FAA]
 gi|316918304|gb|EFV39646.1| outer membrane assembly lipoprotein YfiO [Enterobacteriaceae
           bacterium 9_2_54FAA]
          Length = 245

 Score = 75.5 bits (184), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 100/224 (44%), Gaps = 15/224 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           SS+D   D+        E+Y  A   L++ NF  A          +PF   +++  L   
Sbjct: 22  SSKDAVPDNPP-----SEIYATAQQKLQDGNFKAAITQLEALDNRYPFGPYSQQVQLDLI 76

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYD 151
           +  Y +     A +  + ++   P   N+DYV Y+ G++   +          I     D
Sbjct: 77  YAYYKSADLPMAQASIDRFMRLNPTHPNIDYVLYMRGLTDMALDDSALQGFFGIDRSDRD 136

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
               +   +  S++V+RY NS Y   A   +   +++LA  E+ + +YY KRG YVA + 
Sbjct: 137 PEHARQAFRDFSQLVQRYPNSQYSADATKRLVYLKDRLAKYELSVAQYYTKRGAYVAVVN 196

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           R + +L NY D +   +A+  +  AY  + L  +A +V  +I E
Sbjct: 197 RVENMLRNYPDTQATRDALPLMENAYKQMNLTAQADKVAKIIAE 240


>gi|290476242|ref|YP_003469142.1| putative lipoprotein with tetratricopeptide repeats (TPR) domain
           [Xenorhabdus bovienii SS-2004]
 gi|289175575|emb|CBJ82378.1| putative lipoprotein with tetratricopeptide repeats (TPR) domain
           [Xenorhabdus bovienii SS-2004]
          Length = 244

 Score = 75.5 bits (184), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 99/216 (45%), Gaps = 13/216 (6%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D+V D+  Q ++Y      L+E N+  A +        +PF   ++++ L   +  Y + 
Sbjct: 26  DAVPDIP-QSQIYSAGQKHLQEGNYKGAIKQLESLDNRYPFGPYSQQTQLDLIYAYYKSA 84

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY-----------DQRATKL 157
           ++  A +  + ++   P   N+DYV YL  +  +Q + D              D    + 
Sbjct: 85  EFPMALASIDRFMRLNPTHPNIDYVIYLRAL-ISQALDDNTLQSFFGIDRSDRDPEHARA 143

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
             +  + +V RY NS Y   A   +   + +LA  E+ + +YY KR  YVA + R + +L
Sbjct: 144 SFRDFNLLVSRYPNSQYTSDAAKRLVFLKERLAKYELAVVKYYTKRSAYVAVVSRVEQML 203

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +Y D +   EA+  +  +Y  L LM EA +V  LI
Sbjct: 204 RDYPDTQATREALPYMEASYKELGLMAEADKVAKLI 239


>gi|301154794|emb|CBW14257.1| predicted lipoprotein [Haemophilus parainfluenzae T3T1]
          Length = 263

 Score = 75.5 bits (184), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 102/237 (43%), Gaps = 24/237 (10%)

Query: 28  FSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
           F+IA C     E  Q+S D             E+Y K    L+E ++S +  Y    +  
Sbjct: 15  FAIAACSSGNKEVEQASVD-------------ELYAKGAAALQEGSYSDSIRYLKAATER 61

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY----A 142
           FP +    +++L   +  Y    Y       + ++ Q+P+S N DY  Y+ G++      
Sbjct: 62  FPGSTYQEQAMLDLIYANYKTQDYTATLVTVDNFLQQFPQSPNRDYAVYMAGLTNLATAD 121

Query: 143 QMIRDVPYDQRAT------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
            MI+D     RAT      K        +V  + NSPY + A   +   ++ LA  E+EI
Sbjct: 122 NMIQDFFGIDRATRETTSMKTAFSNFQSLVRAFPNSPYSQDAVARMAYIKDSLARHELEI 181

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            ++Y KR  +VA   R   +L  Y DA+   E +  + EAY  + L   A +   +I
Sbjct: 182 AKFYAKRDAWVAVSNRVVGMLQQYPDAKATYEGLFLMKEAYEKMGLQQLANQTQQVI 238


>gi|189426001|ref|YP_001953178.1| outer membrane assembly lipoprotein YfiO [Geobacter lovleyi SZ]
 gi|189422260|gb|ACD96658.1| outer membrane assembly lipoprotein YfiO [Geobacter lovleyi SZ]
          Length = 248

 Score = 75.5 bits (184), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 96/204 (47%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y +     ++  + +A E + +    FP   +A ++ +  A   +    + +A +  E
Sbjct: 33  ELYAQGETAFQKSRYEQAVESWKKVKETFPEPELAARAEIGIANAYFLNHDFIEAGAAYE 92

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           ++   +P  +   +  Y  G++   +I  +  DQ  TK  L      + +Y  S YV   
Sbjct: 93  DFRKLHPTHELAQFSLYRQGLASFNLITGIDTDQTPTKNALALFESFIRQYPKSQYVAKV 152

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
           +  +   R +LA  E+ +GR+Y +   Y AAI RF+  L N+ D    +E +  L +AY+
Sbjct: 153 QEKIADCRGKLAQYEIYVGRFYYRTDNYQAAIGRFEGALTNFPDYTGNDETLFYLAKAYI 212

Query: 239 ALALMDEAREVVSLIQERYPQGYW 262
           A    D+A+ V+S +   YP G +
Sbjct: 213 ANRQSDKAQTVLSRLIREYPTGKY 236


>gi|87119408|ref|ZP_01075305.1| competence lipoprotein ComL, putative [Marinomonas sp. MED121]
 gi|86164884|gb|EAQ66152.1| competence lipoprotein ComL, putative [Marinomonas sp. MED121]
          Length = 280

 Score = 75.1 bits (183), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 93/182 (51%), Gaps = 10/182 (5%)

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY----- 141
           +PF    +++ L   +  + A  Y  A +  E +I +YPE + +DYVYY   +S      
Sbjct: 65  YPFGEFTQRAELEIIYAYFLASDYISAHANAERFIKKYPEFETIDYVYYYRALSTFKGGE 124

Query: 142 ---AQMIRDVPYDQRATKLMLQY--MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
               + +   P  + +++ +  +   + +++R+  S Y   A+  +   RN +A  E+++
Sbjct: 125 TLSTRYLNQDPSQRDSSEFIKAFREFADLLKRFPESSYASDAKARMIYLRNTIARHELQV 184

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            +YY KR   +AA+ R Q VL  Y  ++  E+A+A  ++AY+ L   + A + ++++   
Sbjct: 185 AKYYFKRNAPLAALHRSQTVLNKYPSSDSVEDALAINIQAYIELEQFELADQNLAILTNN 244

Query: 257 YP 258
           YP
Sbjct: 245 YP 246


>gi|148653371|ref|YP_001280464.1| DNA uptake lipoprotein-like protein [Psychrobacter sp. PRwf-1]
 gi|148572455|gb|ABQ94514.1| DNA uptake lipoprotein-like protein [Psychrobacter sp. PRwf-1]
          Length = 393

 Score = 75.1 bits (183), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 110/248 (44%), Gaps = 23/248 (9%)

Query: 27  FFSIAVC-FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
             S+  C  L     + S  V     TD +Y    Y++AV  + +  +  A E   +   
Sbjct: 34  LLSLTGCQTLKNITGKDSDTVATAEKTDAQY----YQEAVKAMDKGRYIYASEQLTELRT 89

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG------- 138
            +P    A ++LL   + Q+    Y+ AA+  E++I  YP +  VDY YY+ G       
Sbjct: 90  FYPTGAYAEQALLDLMYSQFQTKDYELAATSAEQFIKLYPRNPQVDYAYYVRGVANMHAG 149

Query: 139 ----MSYAQM---IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
               +S A+M    RD  Y     +L       ++ R+ NS Y   A   +T   NQ A 
Sbjct: 150 TSSLLSIARMQQADRDTSY----YRLAFSNFQDLLSRFPNSSYAPDAAQRMTYIYNQFAE 205

Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
            E+   R+Y+KR  YVAA  R + V   Y  ++   E++A L  +   L L D A +  +
Sbjct: 206 SELSAARWYIKREAYVAAANRAKWVFQYYPLSQQIPESIAILAYSNEQLGLTDLANQYKT 265

Query: 252 LIQERYPQ 259
           L+Q  YP+
Sbjct: 266 LLQINYPE 273


>gi|255318858|ref|ZP_05360084.1| DNA uptake lipoprotein [Acinetobacter radioresistens SK82]
 gi|262378884|ref|ZP_06072041.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
 gi|255304114|gb|EET83305.1| DNA uptake lipoprotein [Acinetobacter radioresistens SK82]
 gi|262300169|gb|EEY88081.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
          Length = 343

 Score = 75.1 bits (183), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 121/259 (46%), Gaps = 27/259 (10%)

Query: 17  YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSK 75
           Y++   AL++  + A   LVG      ++V +D  T  +   +VY  KA   L+   +S 
Sbjct: 6   YKVTMLALSLGIASA---LVGCSSNPKKEV-VD--TGPQSSEQVYFNKAERALERGQYSD 59

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A +        FP    A+++ L   +V++    Y+ A +L E +I   P+  NVDY YY
Sbjct: 60  AAKQLEALDTYFPTGQYAQQAQLELLYVKFQQKDYEGAIALAERFIRLNPQHPNVDYAYY 119

Query: 136 LVGM--------------SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY-VKGARF 180
           + G+              S  Q  RDV Y     K+  Q     + RY +S Y V  A+ 
Sbjct: 120 VRGVANMEQNYDGLLRYTSLQQSHRDVSY----LKVAYQNFVDFIRRYPSSQYAVDAAQR 175

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
              +G+ +LA  E+ + RY LKR  +VAA+ R Q V+ +Y       EA+A +  AY  L
Sbjct: 176 MKFIGQ-ELAENEMNVARYNLKRKAWVAALERAQWVVEHYPQTPQIPEALATMAYAYDKL 234

Query: 241 ALMDEAREVVSLIQERYPQ 259
                +++ V +++  YP+
Sbjct: 235 GDQASSQQYVEVLKLNYPE 253


>gi|319943654|ref|ZP_08017935.1| competence lipoprotein ComL [Lautropia mirabilis ATCC 51599]
 gi|319742887|gb|EFV95293.1| competence lipoprotein ComL [Lautropia mirabilis ATCC 51599]
          Length = 359

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 14/213 (6%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y  A   L   N++ A +   +    +PF   A+++ L  A+  Y  G   +A S  +
Sbjct: 82  QLYADAKADLDAGNWTSAIKGMERLESRYPFGSYAQQAQLDIAWAHYKEGDRAEALSAID 141

Query: 119 EYITQYPESKNVDYVYYLVGM----SYAQMI-----RDVP-YDQRATKLMLQYMSRIVER 168
            +I  +P  + +DY YYL G+    +   +I     +D    D  AT+       ++V R
Sbjct: 142 RFIRLHPAHERLDYAYYLKGLVNFSNGTGLIARWAGQDASERDLAATREAYDAFQQVVNR 201

Query: 169 YTNSPYVKG--ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
           +  S Y +   AR    V  N +A+ EV + R+YL RG YVA+  R Q VL++Y      
Sbjct: 202 FPQSRYREDSIARMRSLV--NSMASGEVHVARFYLSRGAYVASANRAQGVLSSYQGTPAT 259

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           E+A+  L  +Y  L L D   + V ++   +PQ
Sbjct: 260 EDALNILATSYDRLNLPDLRDDTVRVLARTWPQ 292


>gi|329123817|ref|ZP_08252375.1| NrfG protein [Haemophilus aegyptius ATCC 11116]
 gi|327469304|gb|EGF14775.1| NrfG protein [Haemophilus aegyptius ATCC 11116]
          Length = 272

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 16/222 (7%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
            S+DV   SV       E+Y K    L+E ++S+A  Y    +  FP +    +++L   
Sbjct: 32  GSKDVEQASVN------ELYTKGTTSLQEGSYSEAIRYLKATTERFPGSIYQEQAMLDLI 85

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA----QMIRDVPYDQRAT-- 155
           +  Y A  Y Q   + + ++ Q+P+S N  Y  Y+ G++ A      I+D     RAT  
Sbjct: 86  YANYKAQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNFIQDFFGIDRATRE 145

Query: 156 ----KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
               +        +V  + NSPY + A   +   ++ LA  E+EI ++Y KR  +VA   
Sbjct: 146 TTSMRTAFSNFQNLVRVFPNSPYSQDALARMAYIKDALARHELEIAKFYAKRKAWVAVAN 205

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           R   +L  Y D +   E +  + EAY  + L   A +   +I
Sbjct: 206 RVVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKII 247


>gi|319775953|ref|YP_004138441.1| lipoprotein [Haemophilus influenzae F3047]
 gi|319898142|ref|YP_004136339.1| lipoprotein [Haemophilus influenzae F3031]
 gi|317433648|emb|CBY82033.1| predicted lipoprotein [Haemophilus influenzae F3031]
 gi|317450544|emb|CBY86761.1| predicted lipoprotein [Haemophilus influenzae F3047]
          Length = 262

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 16/222 (7%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
            S+DV   SV       E+Y K    L+E ++S+A  Y    +  FP +    +++L   
Sbjct: 22  GSKDVEQASVN------ELYTKGTTSLQEGSYSEAIRYLKATTERFPGSIYQEQAMLDLI 75

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA----QMIRDVPYDQRAT-- 155
           +  Y A  Y Q   + + ++ Q+P+S N  Y  Y+ G++ A      I+D     RAT  
Sbjct: 76  YANYKAQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNFIQDFFGIDRATRE 135

Query: 156 ----KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
               +        +V  + NSPY + A   +   ++ LA  E+EI ++Y KR  +VA   
Sbjct: 136 TTSMRTAFSNFQNLVRVFPNSPYSQDALARMAYIKDALARHELEIAKFYAKRKAWVAVAN 195

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           R   +L  Y D +   E +  + EAY  + L   A +   +I
Sbjct: 196 RVVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKII 237


>gi|317485235|ref|ZP_07944116.1| outer membrane assembly lipoprotein YfiO [Bilophila wadsworthia
           3_1_6]
 gi|316923526|gb|EFV44731.1| outer membrane assembly lipoprotein YfiO [Bilophila wadsworthia
           3_1_6]
          Length = 240

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 13/216 (6%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +E+YE A   ++E+N+S+A +Y+ +   +FPF+    ++ L      +  GKY +AA   
Sbjct: 34  QELYEGANDAMQEKNYSQAAQYYTKLKDNFPFSPYTVEAELSLGDAFFLDGKYPEAAEAY 93

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           +E+ + +P  + + YV Y VGMS  +    V     +T+  L++  R+ E Y NS Y + 
Sbjct: 94  KEFESLHPRHEAIPYVLYQVGMSNLKSFISVDRPTTSTQEALEFFGRLRETYPNSEYAQK 153

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD----AEHAEEAMARL 233
           +   +   R  LA  E+ +G  +     Y  A  R+  ++ N+ D    + HA+E     
Sbjct: 154 SVEEMKNCRRLLAEHELYLGDVFWNMNNYGPAWRRYTYIVDNFPDVPEVSAHAKEK---- 209

Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
                AL+     RE  S       QG W R+ + L
Sbjct: 210 -----ALSAYYRYREQQSQKAREQIQGSWKRWFDWL 240


>gi|167627647|ref|YP_001678147.1| competence lipoprotein ComL [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|241668215|ref|ZP_04755793.1| competence lipoprotein ComL [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876750|ref|ZP_05249460.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|167597648|gb|ABZ87646.1| competence lipoprotein ComL [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|254842771|gb|EET21185.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 274

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 106/220 (48%), Gaps = 13/220 (5%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y KA   ++ + +  A   +      +PF  +A K ++   +V Y   +   A +LG++
Sbjct: 40  IYAKAHEQMQNEKYFDAIRSYKSLVAQYPFTPLAEKGMVDLIYVYYMDDESTMALALGQQ 99

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDV-----PYD---QRATKLMLQYMS--RIVERY 169
           +I  YP S    YVYY++G+   +  R +     PYD      T     Y++  + ++  
Sbjct: 100 FIKMYPYSSYKGYVYYMIGVVGFEDGRGILQTYAPYDMNYHDPTGYQDAYVNFEKAIKLD 159

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
               +V  A+  +    N +A    +I ++Y KRG Y AA+ R   ++ NY  +   ++A
Sbjct: 160 PKGSFVPDAKRRMIYINNIIAEHYYDIAKFYYKRGAYNAALDRASQIIRNYPQSTVTQDA 219

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
           +   + AY  L L D+A++ + ++++ YP+    ++V  L
Sbjct: 220 LVLTIRAYNKLGLYDQAKDNIRVLKKNYPKN---KFVNNL 256


>gi|330999931|ref|ZP_08323629.1| outer membrane assembly lipoprotein YfiO [Parasutterella
           excrementihominis YIT 11859]
 gi|329573338|gb|EGG54950.1| outer membrane assembly lipoprotein YfiO [Parasutterella
           excrementihominis YIT 11859]
          Length = 254

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 104/218 (47%), Gaps = 10/218 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L E N+  A +Y+ +    +P+   ++++ + +A+  +  G+ QQA ++ +
Sbjct: 16  KLYVEARDNLNEGNYETARDYYQKLEARYPYGRYSQQAQVETAYSYFKEGEPQQAIAVCD 75

Query: 119 EYITQYPESKNVDYVYYLVG----------MSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
            ++ QYPE     Y  Y+ G          MSY         D +A +        +V R
Sbjct: 76  RFLRQYPEHPLSPYALYIKGIATLDEDEGWMSYLTRQDLSKRDAQAARDAFDIFKELVLR 135

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           + NS Y + AR  +       A  E+   +YY  R  Y+AAI R + VL N+  +  AEE
Sbjct: 136 FPNSRYARDARERMHELVEAQAKYEINTAKYYYVRDAYIAAINRAENVLLNFQTSPQAEE 195

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
           A+  + ++Y  L + D+A ++  ++     +G +  Y+
Sbjct: 196 ALIIMRDSYNKLGMDDKAADIQRILDANKNRGSYDTYL 233


>gi|152977724|ref|YP_001343353.1| TPR repeat-containing protein [Actinobacillus succinogenes 130Z]
 gi|150839447|gb|ABR73418.1| TPR-repeat-containing protein [Actinobacillus succinogenes 130Z]
          Length = 270

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 98/208 (47%), Gaps = 10/208 (4%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           ++E++ K   +++E N+S A +Y       FP +  + ++ L   +  Y    Y  A   
Sbjct: 31  EQELFTKGQAYVQEGNYSDATKYLQAVDSRFPGSDYSEQAELNLIYAAYRNQDYTTALVT 90

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQM----IRDVPYDQRAT------KLMLQYMSRIV 166
            + ++  +P+S++ DYV Y+  ++   M    I+D     RA+      K        +V
Sbjct: 91  ADRFLQLHPQSQHTDYVLYMAALTNMSMGDNFIQDFFGIDRASRESTSMKTAFGNFQTLV 150

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
           + + NSPY   A   +   +++LA  E+EI ++Y KR  +VA   R   +L  Y D    
Sbjct: 151 QHFPNSPYTPDAITRMAYIKDRLARHELEIAKFYAKRNAWVAVSNRVTGMLQTYPDTNAT 210

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQ 254
            +A+  L +AY  + L    ++  +L++
Sbjct: 211 LQALPLLEKAYHEMGLTQLEQKAATLVK 238


>gi|319778231|ref|YP_004129144.1| component of the lipoprotein assembly complex protein [Taylorella
           equigenitalis MCE9]
 gi|317108255|gb|ADU91001.1| component of the lipoprotein assembly complex protein [Taylorella
           equigenitalis MCE9]
          Length = 256

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 104/212 (49%), Gaps = 12/212 (5%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y+ A  +++ +++  A +Y        P++  A+++++  A+V +   + ++A ++ +
Sbjct: 21  KLYDTARTYVRGRDWDSARKYLAAIENRHPYSSYAQQAMIDEAYVNWKDEQPERAIAVID 80

Query: 119 EYITQYPESKNVDYVYYLVGM-----------SYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            ++  YP     +Y+ YL G+           S+A   +    D R  +        +++
Sbjct: 81  RFLQIYPSHPGTEYMLYLKGLITFTPPTHFLTSFAGQ-KPSERDPRGLRQSYTAFKVLID 139

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y NS Y   AR  +      LA  E  + +YY ++  YVAAI R Q+VL  +S    AE
Sbjct: 140 NYPNSRYAADARQRLVWLVTTLAEHEANVAKYYYEKKAYVAAINRAQVVLTEFSGVPSAE 199

Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            A+  L+++Y AL   D+A +  S++ + YP 
Sbjct: 200 LALYVLMKSYEALGSEDQAADAKSVLVKNYPN 231


>gi|238752928|ref|ZP_04614390.1| hypothetical protein yrohd0001_38840 [Yersinia rohdei ATCC 43380]
 gi|238708836|gb|EEQ01092.1| hypothetical protein yrohd0001_38840 [Yersinia rohdei ATCC 43380]
          Length = 240

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 104/233 (44%), Gaps = 15/233 (6%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
           A   LV     S++DV  D+        E+Y  A   L++ NF  A          +PF 
Sbjct: 8   ATLSLVLTGCSSNKDVVPDNPP-----SELYATAQQKLQDGNFKGAITQLEALDNRYPFG 62

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM------ 144
             +++  L   +  Y +     A +  + ++   P   N+DYV Y+ G++   +      
Sbjct: 63  PYSQQVQLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVLYMRGLTDMALDDSALQ 122

Query: 145 ----IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
               I     D +  K   +  +++++ Y NS Y   A+  +   +++LA  E+ + +YY
Sbjct: 123 GFFGIDRSDRDPQHAKAAFRDFNQLIQSYPNSQYATDAQKRLMFLKDRLAKHELAVAQYY 182

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            KRG YVA + R + +L +Y D +   +A+  +  AY  L L  EA +V  +I
Sbjct: 183 TKRGAYVAVVNRVEQMLRDYPDTQATRDALPLMENAYKQLQLTAEADKVAKII 235


>gi|120553809|ref|YP_958160.1| DNA uptake lipoprotein [Marinobacter aquaeolei VT8]
 gi|120323658|gb|ABM17973.1| DNA uptake lipoprotein [Marinobacter aquaeolei VT8]
          Length = 277

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 100/209 (47%), Gaps = 10/209 (4%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YE A   +   NF++A +  +     +PF   A ++ L   F +Y     + + +  + +
Sbjct: 35  YENAREAMNSGNFNEAEQNLDALETYYPFGRYAEQAQLDLIFARYQNLDLEGSRAAADRF 94

Query: 121 ITQYPESKNVDYVYYLVGMSYAQM-----IRDVPYDQRATKLMLQY-----MSRIVERYT 170
           I   P+S+++DY  Y+ G++   +      R  P D  A     Q       S+++ R+ 
Sbjct: 95  IRLNPQSEHLDYALYMRGLASYNLDLGLATRYFPVDAAARNPGEQLQAFRDFSQLLNRFP 154

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
           +S Y   AR  +   RN++A  E+   RYY+KR  YVAA  R + V+ NY  +   EEA+
Sbjct: 155 DSDYALDARQRMIAIRNRMAELELHAARYYIKREAYVAANNRARYVVENYPSSPSVEEAL 214

Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQ 259
             + + +  L L   A + ++ +++ +P 
Sbjct: 215 MIMADTFRFLELKKGANDAIATLRKNFPN 243


>gi|33151687|ref|NP_873040.1| putative lipoprotein [Haemophilus ducreyi 35000HP]
 gi|18203223|sp|Q9L7A6|Y470_HAEDU RecName: Full=UPF0169 lipoprotein HD_0470; Flags: Precursor
 gi|6942293|gb|AAF32395.1|AF224466_2 hypothetical lipoprotein [Haemophilus ducreyi]
 gi|33147908|gb|AAP95429.1| conserved putative lipoprotein [Haemophilus ducreyi 35000HP]
          Length = 260

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 10/163 (6%)

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----IRDVPYDQRATKL 157
           F  Y  G+Y +A SL E ++  YP S N+DYV+YLVG+S  ++    I+D  +  R+++ 
Sbjct: 79  FAHYKTGEYYKALSLAERFVRAYPNSNNMDYVHYLVGLSNVRLGDNFIQDFFHVNRSSRT 138

Query: 158 MLQYMS------RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           +    +       IV  Y  S YV  A+ ++    N++A  E+ I ++Y KR   VA + 
Sbjct: 139 IESIRNAYGNFQMIVRIYPQSQYVNDAQQWMVYLLNRMAEHELSIVKFYDKRDASVAVVN 198

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
           R + +L  Y  ++   +A+  + +AY  + L D   +V  LI+
Sbjct: 199 RVEEMLRFYPASKSTFDALPYMQKAYQRMGLKDSEAKVAELIE 241


>gi|226328714|ref|ZP_03804232.1| hypothetical protein PROPEN_02609 [Proteus penneri ATCC 35198]
 gi|225201900|gb|EEG84254.1| hypothetical protein PROPEN_02609 [Proteus penneri ATCC 35198]
          Length = 244

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 103/233 (44%), Gaps = 17/233 (7%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
           V  L+     S +D   D         E+Y  +   L + N+  A +        +PF  
Sbjct: 13  VSLLLAGCSSSDKDATADMSP-----SELYSTSQEKLLDGNYGAAIKQLESLDNRYPFGP 67

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY- 150
            +++  L   +  Y + +   A S  + ++   P   N+DYV Y+ G++ AQ + D    
Sbjct: 68  YSQQVQLDLIYAYYKSAELPMAISAIDRFMRLNPTHPNIDYVLYMRGLT-AQALDDSALQ 126

Query: 151 ----------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
                     D +   +  +  S++V  Y +S Y   A   +   +N+LA  E+ + ++Y
Sbjct: 127 GFFGIDRSDRDPQHAIVAFKDFSQLVRYYPDSLYAADATKRLVFLKNRLAKYELSVAKFY 186

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            KRG YVA I R + ++ +Y D +   +A+  +  AY  L L  EA +V SLI
Sbjct: 187 TKRGAYVAVINRVEQMMRDYPDTQATRDALVYMENAYKELGLTQEAEKVASLI 239


>gi|261346209|ref|ZP_05973853.1| competence lipoprotein ComL [Providencia rustigianii DSM 4541]
 gi|282565515|gb|EFB71050.1| competence lipoprotein ComL [Providencia rustigianii DSM 4541]
          Length = 242

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 10/205 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y      L++ N+S A + F      +PF   A++  L   +  Y + +   A +  +
Sbjct: 34  EIYSTGQQKLQDGNYSAAIKQFEALDNRYPFGPYAQQVQLDLIYAYYKSAELPMAIATID 93

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168
            ++   P   N+DYV Y+ G++   +          I     D +   +  + +S++V  
Sbjct: 94  RFMRLNPTHPNIDYVLYMRGLTAMALDDSMLQGFFGIDRSDRDPQHALVAFKDLSQLVRY 153

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS Y   A   +   +++LA  ++ +  YY KRG YVA + R Q +L +Y D E   +
Sbjct: 154 YPNSQYSNDASKRLVYLKDRLAKFDLSVVEYYNKRGAYVAVVNRVQQMLRDYPDTEATRK 213

Query: 229 AMARLVEAYVALALMDEAREVVSLI 253
           A+  +  AY  + L +EA +V S++
Sbjct: 214 ALTYMEIAYKEMGLDNEANKVASIL 238


>gi|262369408|ref|ZP_06062736.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
 gi|262315476|gb|EEY96515.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
          Length = 327

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 118/257 (45%), Gaps = 25/257 (9%)

Query: 17  YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSK 75
           Y++   ALTI  + A   +VG      ++V +D  T  +   +VY +KA   L+   ++ 
Sbjct: 6   YKMTMLALTIGIASA---MVGCSSNPKKEV-VD--TGPQSSEQVYIQKAEKALQSGQYTD 59

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A ++       +P    A+++ L   +V++    Y+ A +L + +I   P+  NVDY YY
Sbjct: 60  AAKHLEALDTYYPTGEYAQQAQLELLYVKFQQKDYEGAIALADRFIRLNPQHPNVDYAYY 119

Query: 136 LVGM--------------SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
           + G+              S  Q  RDV Y     K+  Q     + RY +S Y   A   
Sbjct: 120 VRGVANMEQNYDGLIRYTSLKQAHRDVSY----LKVAYQNFVDFIRRYPSSTYAVDAAQR 175

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
           +    N+LA  E+   R+ +KR  +VAA+ R Q V+ +Y  +    EA+A +  +Y  L 
Sbjct: 176 MKFISNELAESEMNAARFNIKRKAWVAALERAQWVIEHYPQSPQVPEALATVAYSYDQLG 235

Query: 242 LMDEAREVVSLIQERYP 258
               A++   +++  YP
Sbjct: 236 DKQTAQQYTDVLKLNYP 252


>gi|145635281|ref|ZP_01790984.1| conserved hypothetical lipoprotein [Haemophilus influenzae PittAA]
 gi|145267425|gb|EDK07426.1| conserved hypothetical lipoprotein [Haemophilus influenzae PittAA]
          Length = 262

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 16/221 (7%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
           S+DV   SV       E+Y K    L+E ++S+A  Y    +  FP +    +++L   +
Sbjct: 23  SKDVEQASVN------ELYTKGTTSLQEGSYSEAIRYLKATTERFPSSVYQEQAMLDLIY 76

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA----QMIRDVPYDQRAT--- 155
             Y    Y Q   + + ++ Q+P+S N  Y  Y+ G++ A      I+D     RAT   
Sbjct: 77  ANYKTQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNFIQDFFGIDRATRET 136

Query: 156 ---KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              +        +V  + NSPY + A   +   ++ LA  E+EI ++Y KR  +VA   R
Sbjct: 137 TSMRTAFSNFQNLVRVFPNSPYAQDALARMAYIKDALARHELEIAKFYAKRKAWVAVANR 196

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
              +L  Y D +   E +  + EAY  + L   A +   +I
Sbjct: 197 VVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKII 237


>gi|301064420|ref|ZP_07204845.1| outer membrane assembly lipoprotein YfiO [delta proteobacterium
           NaphS2]
 gi|300441502|gb|EFK05842.1| outer membrane assembly lipoprotein YfiO [delta proteobacterium
           NaphS2]
          Length = 240

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 79/164 (48%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+  + +    +  F+KA E F +    +P++  A  + L  A   Y  G+Y +A     
Sbjct: 41  EIMNEGMADFNDGKFTKAIETFQKIKDRYPYSTFALTAELKMADALYEKGEYDEARDEYA 100

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           E+   +P +KNV YV Y  GM Y      +  DQ  T    +   R+++R+  S Y + A
Sbjct: 101 EFEKMHPRNKNVPYVLYRQGMCYFNKSAAIDRDQSDTFKAREEFERLIKRFRKSDYTEQA 160

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
           R  V     +LA  E+ +G +Y  +G+Y  A+ R+  ++ +Y D
Sbjct: 161 RRKVRECYIKLAEHELYVGNFYFTKGKYETAMARYLYLIDHYPD 204


>gi|68248782|ref|YP_247894.1| hypothetical protein NTHI0266 [Haemophilus influenzae 86-028NP]
 gi|68056981|gb|AAX87234.1| conserved hypothetical lipoprotein [Haemophilus influenzae
           86-028NP]
          Length = 262

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 16/222 (7%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
            S+DV   SV       E+Y K    L+E ++S+A  Y    +  FP +    +++L   
Sbjct: 22  GSKDVEQASVN------ELYTKGTTSLQEGSYSEAIRYLKATTERFPGSVYQEQAMLDLI 75

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA----QMIRDVPYDQRAT-- 155
           +  Y    Y Q   + + ++ Q+P+S N  Y  Y+ G++ A      I+D     RAT  
Sbjct: 76  YANYKTQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNFIQDFFGIDRATRE 135

Query: 156 ----KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
               +        +V  + NSPY + A   +   ++ LA  E+EI ++Y KR  +VA   
Sbjct: 136 TTSMRTAFSNFQNLVRVFPNSPYAQDALARMAYIKDALARHELEIAKFYAKRKAWVAVAN 195

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           R   +L  Y D +   E +  + EAY  + L   A +   +I
Sbjct: 196 RVVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKII 237


>gi|148827315|ref|YP_001292068.1| hypothetical protein CGSHiGG_03480 [Haemophilus influenzae PittGG]
 gi|148718557|gb|ABQ99684.1| conserved hypothetical lipoprotein [Haemophilus influenzae PittGG]
          Length = 262

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 16/221 (7%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
           S+DV   SV       E+Y K    L+E ++S+A  Y    +  FP +    +++L   +
Sbjct: 23  SKDVEQASV------NELYTKGTTSLQEGSYSEAIRYLKATTERFPGSIYQEQAMLDLIY 76

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----QRAT--- 155
             Y    Y Q     + ++ Q+P+S N  Y  Y+ G++ A    +V  D     RAT   
Sbjct: 77  ANYKTQDYTQVLLTVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNVIQDFFGIDRATRET 136

Query: 156 ---KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              +        +V  + NSPY + A   +   ++ LA  E+EI ++Y KR  +VA   R
Sbjct: 137 TSMRTAFSNFQNLVRAFPNSPYSQDALARMAYIKDALARHELEIAKFYTKRKAWVAVANR 196

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
              +L  Y D +   E +  + EAY  + L   A +   +I
Sbjct: 197 VVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKII 237


>gi|304414307|ref|ZP_07395675.1| outer membrane protein assembly complex [Candidatus Regiella
           insecticola LSR1]
 gi|304283521|gb|EFL91917.1| outer membrane protein assembly complex [Candidatus Regiella
           insecticola LSR1]
          Length = 246

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 100/228 (43%), Gaps = 27/228 (11%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           +S DV  DS        E+Y  A   L+  NF  A          +PF+  + +      
Sbjct: 22  NSNDVVPDSPP-----TELYTDAQQKLQSGNFQGAITQLEALDSRYPFSAYSSQVQFDLI 76

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML-- 159
           +  Y +     A    + ++   P   N+DY+ YL G++      D+  D  A + +   
Sbjct: 77  YAYYKSANLSMALVSIDRFMRLNPTHPNIDYMLYLRGLT------DMALDDSALQGLFGI 130

Query: 160 --------------QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
                         +  ++++E Y +S Y   ++  +   +N+LA  E++I RYY KRG 
Sbjct: 131 DRSDRDPIYVLAAFRDFTQLIENYPDSQYATDSQKRLLYLKNRLAKHELDIARYYTKRGA 190

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +VA + R + ++ NY D +   +A+  +  AY  L L ++A +V  LI
Sbjct: 191 HVAVVNRIEQMMQNYPDTQATRDALPLMKNAYERLQLNEQADQVAKLI 238


>gi|50085932|ref|YP_047442.1| putative competence protein (ComL) [Acinetobacter sp. ADP1]
 gi|49531908|emb|CAG69620.1| putative competence protein (ComL) [Acinetobacter sp. ADP1]
          Length = 351

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 122/258 (47%), Gaps = 27/258 (10%)

Query: 17  YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSK 75
           Y++   AL++  + A   +VG      ++V +D  T  +   ++Y +KA   L    +++
Sbjct: 6   YKITMLALSLGVAAA---MVGCSSNPKKEV-VD--TGPQSSEQIYFQKAEKALDRGQYTE 59

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A +        +P    A ++ L   +V++   +Y+   S  + +I   P+  N+DYVYY
Sbjct: 60  AAKSLEAIDTYYPTGQYAAQAQLDLLYVKFQQKEYETVVSQADRFIRLNPQHPNIDYVYY 119

Query: 136 LVGM--------------SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY-VKGARF 180
           + G+              S  Q  RD  Y     KL  Q    ++ R+ +SPY V  A+ 
Sbjct: 120 IRGVANMELNYDSLMRYTSLQQSHRDTSY----MKLAYQNFVDLIRRFPSSPYSVDAAQR 175

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
              +G+ +LA  E+ + R+ +KR  +VAAI R Q V+ ++       EA+A L  AY  L
Sbjct: 176 MKFIGQ-ELAESEMNVARFNIKRKAWVAAIDRAQWVVEHFPQTPQTPEALATLAYAYNEL 234

Query: 241 ALMDEAREVVSLIQERYP 258
                +++ V+L++  YP
Sbjct: 235 GDQATSQQYVNLLKLNYP 252


>gi|220904471|ref|YP_002479783.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
 gi|219868770|gb|ACL49105.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
          Length = 243

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 94/189 (49%), Gaps = 10/189 (5%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
           +YL    D    +E++E A   + E+N+ +A E +N+    +PF+     + L      +
Sbjct: 27  IYLPPAEDT--AQEIFEAANDAMSEKNYVRAVELYNKLRDTYPFSPYTIDAELSLGDAYF 84

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM--LQYMS 163
              +Y+ A+   +++ + +P  + + YV Y  GMS  +  R +  D+  T+L     Y +
Sbjct: 85  LDEEYELASESYKDFESLHPRHEAIPYVLYQTGMSLLKQFRSI--DRATTELQEAYDYFN 142

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD- 222
           R+ + Y +SPY KGA  ++   R  +A  E+ I   +    +Y  A  R++ ++ N+ D 
Sbjct: 143 RLHQMYPDSPYAKGAEEHMITCRKLMAEHELYIADVFWHMKKYGPAWHRYEFIVKNFQDV 202

Query: 223 ---AEHAEE 228
              AEHA+E
Sbjct: 203 PEVAEHAKE 211


>gi|145633598|ref|ZP_01789326.1| pyruvate formate lyase-activating enzyme 1 [Haemophilus influenzae
           3655]
 gi|145637337|ref|ZP_01792997.1| conserved hypothetical lipoprotein [Haemophilus influenzae PittHH]
 gi|148825562|ref|YP_001290315.1| hypothetical protein CGSHiEE_02415 [Haemophilus influenzae PittEE]
 gi|229845162|ref|ZP_04465296.1| conserved hypothetical lipoprotein [Haemophilus influenzae 6P18H1]
 gi|229847287|ref|ZP_04467390.1| conserved hypothetical lipoprotein [Haemophilus influenzae 7P49H1]
 gi|144985804|gb|EDJ92418.1| pyruvate formate lyase-activating enzyme 1 [Haemophilus influenzae
           3655]
 gi|145269429|gb|EDK09372.1| conserved hypothetical lipoprotein [Haemophilus influenzae PittHH]
 gi|148715722|gb|ABQ97932.1| conserved hypothetical lipoprotein [Haemophilus influenzae PittEE]
 gi|229809830|gb|EEP45553.1| conserved hypothetical lipoprotein [Haemophilus influenzae 7P49H1]
 gi|229811873|gb|EEP47568.1| conserved hypothetical lipoprotein [Haemophilus influenzae 6P18H1]
 gi|309972702|gb|ADO95903.1| Probable outer membrane protein assembly complex subunit BamD
           [Haemophilus influenzae R2846]
          Length = 262

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 16/221 (7%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
           S+DV   SV       E+Y K    L+E ++S+A  Y    +  FP +    +++L   +
Sbjct: 23  SKDVEQASV------NELYTKGTTSLQEGSYSEAIRYLKATTERFPGSVYQEQAMLDLIY 76

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA----QMIRDVPYDQRAT--- 155
             Y    Y Q   + + ++ Q+P+S N  Y  Y+ G++ A      I+D     RAT   
Sbjct: 77  ANYKTQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNFIQDFFGIDRATRET 136

Query: 156 ---KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              +        +V  + NSPY + A   +   ++ LA  E+EI ++Y KR  +VA   R
Sbjct: 137 TSMRTAFSNFQNLVRVFPNSPYSQDALARMAYIKDALARHELEIAKFYAKRKAWVAVANR 196

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
              +L  Y D +   E +  + EAY  + L   A +   +I
Sbjct: 197 VVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKII 237


>gi|145628475|ref|ZP_01784275.1| conserved hypothetical lipoprotein [Haemophilus influenzae 22.1-21]
 gi|145639767|ref|ZP_01795369.1| pyruvate formate lyase-activating enzyme 1 [Haemophilus influenzae
           PittII]
 gi|144978945|gb|EDJ88631.1| conserved hypothetical lipoprotein [Haemophilus influenzae 22.1-21]
 gi|145271135|gb|EDK11050.1| pyruvate formate lyase-activating enzyme 1 [Haemophilus influenzae
           PittII]
 gi|309750407|gb|ADO80391.1| Probable outer membrane protein assembly complex subunit BamD
           [Haemophilus influenzae R2866]
          Length = 262

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 16/221 (7%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
           S+DV   SV       E+Y K    L+E ++S+A  Y    +  FP +    +++L   +
Sbjct: 23  SKDVEQASV------NELYTKGTTSLQEGSYSEAIRYLKATTERFPGSVYQEQAMLDLIY 76

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA----QMIRDVPYDQRAT--- 155
             Y    Y Q   + + ++ Q+P+S N  Y  Y+ G++ A      I+D     RAT   
Sbjct: 77  ANYKTQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNFIQDFFGIDRATRET 136

Query: 156 ---KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              +        +V  + NSPY + A   +   ++ LA  E+EI ++Y KR  +VA   R
Sbjct: 137 TSMRTAFSNFQNLVRVFPNSPYSQDALARMAYIKDALARHELEIAKFYAKRKAWVAVANR 196

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
              +L  Y D +   E +  + EAY  + L   A +   +I
Sbjct: 197 VVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKII 237


>gi|238785832|ref|ZP_04629801.1| hypothetical protein yberc0001_12680 [Yersinia bercovieri ATCC
           43970]
 gi|238798953|ref|ZP_04642416.1| hypothetical protein ymoll0001_9580 [Yersinia mollaretii ATCC
           43969]
 gi|238713245|gb|EEQ05288.1| hypothetical protein yberc0001_12680 [Yersinia bercovieri ATCC
           43970]
 gi|238717182|gb|EEQ09035.1| hypothetical protein ymoll0001_9580 [Yersinia mollaretii ATCC
           43969]
          Length = 240

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 104/233 (44%), Gaps = 15/233 (6%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
           A   LV     S++DV  D+        E+Y  A   L++ NF  A          +PF 
Sbjct: 8   ATLSLVLTGCSSNKDVVPDNPP-----SELYATAQQKLQDGNFKGAITQLEALDNRYPFG 62

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM------ 144
             +++  L   +  Y +     A +  + ++   P   N+DYV Y+ G++   +      
Sbjct: 63  PYSQQVQLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVLYMRGLTDMALDDSALQ 122

Query: 145 ----IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
               I     D +  K   +  S++++ Y NS Y   A+  +   +++LA  E+ + +YY
Sbjct: 123 GFFGIDRSDRDPQHAKAAFRDFSQLIQSYPNSQYATDAQKRLMFLKDRLAKHELAVAQYY 182

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            KRG YVA + R + +L +Y D +   +A+  +  AY  L L  +A +V  +I
Sbjct: 183 TKRGAYVAVVNRVEQMLRDYPDTKATRDALPLMENAYKQLQLNAQADKVAKII 235


>gi|239996650|ref|ZP_04717174.1| Competence lipoprotein ComL [Alteromonas macleodii ATCC 27126]
          Length = 254

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/215 (21%), Positives = 104/215 (48%), Gaps = 10/215 (4%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +++Y++A   ++  NFS A +  +     +PF  ++ +  L   +  Y +GK ++  +  
Sbjct: 38  QQLYDRAKQSMEVGNFSAAAQTLSALDSRYPFGPLSHQVQLDLIYSYYKSGKNEETLATI 97

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVE 167
           + +I   P   +VDY YY+ G++  +           I     D   ++   +   R+++
Sbjct: 98  DRFIRLNPNHSDVDYAYYMRGLTNMESDSNLFQELMNIDRTDRDPSKSRAAFEDFRRLIQ 157

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
           +Y +S Y   A+  +   +++LA  E+ I R+Y++R  YVAA  R + V+ ++ +    +
Sbjct: 158 QYPDSKYAADAKQRMVHIKDRLARYEIAIARFYMRRQAYVAAANRGRYVIEHFPNTTQVQ 217

Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           +A+  +V +Y  L L +     +  ++  YP   +
Sbjct: 218 QALEIMVSSYEQLGLDELRNNAMKTLKLNYPDSEF 252


>gi|260582392|ref|ZP_05850184.1| pyruvate formate lyase-activating enzyme 1 [Haemophilus influenzae
           NT127]
 gi|260094543|gb|EEW78439.1| pyruvate formate lyase-activating enzyme 1 [Haemophilus influenzae
           NT127]
 gi|301168828|emb|CBW28419.1| predicted lipoprotein [Haemophilus influenzae 10810]
          Length = 262

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 16/221 (7%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
           S+DV   SV       E+Y K    L+E ++S+A  Y    +  FP +    +++L   +
Sbjct: 23  SKDVEQASVN------ELYTKGTTSLQEGSYSEAIRYLKATTERFPGSVYQEQAMLDLIY 76

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA----QMIRDVPYDQRAT--- 155
             Y    Y Q   + + ++ Q+P+S N  Y  Y+ G++ A      I+D     RAT   
Sbjct: 77  ANYKTQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNFIQDFFGIDRATRET 136

Query: 156 ---KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              +        +V  + NSPY + A   +   ++ LA  E+EI ++Y KR  +VA   R
Sbjct: 137 TSMRTAFSNFQNLVRVFPNSPYSQDALARMAYIKDALARHELEIAKFYAKRKAWVAVANR 196

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
              +L  Y D +   E +  + EAY  + L   A +   +I
Sbjct: 197 VVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKII 237


>gi|332992386|gb|AEF02441.1| Competence lipoprotein ComL [Alteromonas sp. SN2]
          Length = 255

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/212 (23%), Positives = 105/212 (49%), Gaps = 10/212 (4%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +++Y +A   ++  NFS A +        +PF  ++ +  L   +  Y +GK  +  +  
Sbjct: 39  QQLYNRAKQSMEVGNFSAAAQTLGALDSRYPFGPLSHQVQLDLIYSYYKSGKSDETLATI 98

Query: 118 EEYITQYPESKNVDYVYYLVGM----SYAQMIRDV------PYDQRATKLMLQYMSRIVE 167
           + +I   P   +VDY YY+ G+    S + + +D+        D   ++   +   R+++
Sbjct: 99  DRFIRLNPNHSDVDYAYYMRGLTNMESDSNLFQDLMNIDRTDRDPSKSRQAFEDFRRLMQ 158

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
           +Y +S Y   AR  +   +++LA  E+ I R+Y++R  YVAA  R + V+ ++ ++   +
Sbjct: 159 QYPDSKYAADARKRMLHIKDRLARYEIAIARFYMRRHAYVAAANRGRYVIEHFPESTQIQ 218

Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           +A+  +V +Y  L L D     +  ++  +P+
Sbjct: 219 QALEIMVSSYEQLGLDDLRGNAMKTLKLNFPE 250


>gi|260775125|ref|ZP_05884023.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio coralliilyticus
           ATCC BAA-450]
 gi|260608826|gb|EEX34988.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio coralliilyticus
           ATCC BAA-450]
          Length = 241

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 110/245 (44%), Gaps = 18/245 (7%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
           T+   +A+  LVG    SS ++    V D+    E+Y +A + L+  N+  A +      
Sbjct: 5   TLSGLLALSVLVGC--SSSEEI----VPDIP-PSELYSEAQISLQSGNWLTAIDKLEALD 57

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
             +PF   + +  L   +  Y         +  E +    P  + +D+V Y+ G+++   
Sbjct: 58  SRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIERFSRLNPTHEKLDWVLYMRGLTHMAQ 117

Query: 145 IRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
            R+  +D              K       +++ERY NSPY + A+  +   +N+LA  ++
Sbjct: 118 DRNFMHDLFNVDRSDRDPEPVKKAFADFKKLLERYPNSPYAEDAQKRMFALKNRLAEYDL 177

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
               +YL+R  ++AAI R Q +   Y D E A +++   +EAY  L L D A+    LI 
Sbjct: 178 ATADFYLRREAWIAAINRTQELQKTYPDTEAARKSLEIQLEAYEKLGLEDAAKRTRQLI- 236

Query: 255 ERYPQ 259
           E  PQ
Sbjct: 237 ELNPQ 241


>gi|325981784|ref|YP_004294186.1| outer membrane assembly lipoprotein YfiO [Nitrosomonas sp. AL212]
 gi|325531303|gb|ADZ26024.1| outer membrane assembly lipoprotein YfiO [Nitrosomonas sp. AL212]
          Length = 268

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 112/256 (43%), Gaps = 23/256 (8%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           L+  AL +   ++ C L+  +R   ++ +    +  ++  E  EK    L + ++  A +
Sbjct: 2   LHSLALFLVLGLSACGLLP-DRTDDQEDW----SANKFYSEAKEK----LNDGSYPAAIK 52

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            +      +P+  +A+++ L  A+  Y   +   A +  + +I  +P   NVDY YY+ G
Sbjct: 53  LYETLESRYPYGRIAQQAQLEVAYAHYKNDEPASAIAAADRFIKLHPNHANVDYAYYIKG 112

Query: 139 MSYAQ-------MIRDVPY-------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
           ++           +   P+       D +A+    +    +V R+  S Y   +R  +  
Sbjct: 113 LANFNEGWGMLGFLLKGPFKQDMSERDPKASYESFEIFKELVTRFPESKYAADSRQRMAY 172

Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
             N LA  E+   RYY+KR  Y+AA  R Q  +  Y      EEA+  ++ AY AL + D
Sbjct: 173 LLNLLAMGEIHTARYYMKRKAYIAAANRAQNAVKEYPPTPATEEALYIMIRAYEALEMYD 232

Query: 245 EAREVVSLIQERYPQG 260
              +   +++  +P  
Sbjct: 233 LRDDAERVMRINFPNS 248


>gi|145631296|ref|ZP_01787068.1| conserved hypothetical lipoprotein [Haemophilus influenzae R3021]
 gi|144983081|gb|EDJ90581.1| conserved hypothetical lipoprotein [Haemophilus influenzae R3021]
          Length = 262

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 16/221 (7%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
           S+DV   SV       E+Y K    L+E ++S+A  Y    +  FP +    +++L   +
Sbjct: 23  SKDVEQASVN------ELYTKGTTSLQEGSYSEAIRYLKATTERFPGSVYQEQAMLDLIY 76

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA----QMIRDVPYDQRAT--- 155
             Y    Y Q   + + ++ Q+P+S N  Y  Y+ G++ A      I+D     RAT   
Sbjct: 77  ANYKTQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNFIQDFFGIDRATRET 136

Query: 156 ---KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              +        +V  + NSPY + A   +   ++ LA  E+EI ++Y KR  +VA   R
Sbjct: 137 TSMRTAFSNFQNLVRVFPNSPYSQDALARMAYIKDALARHELEIAKFYAKRKAWVAVANR 196

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
              +L  Y D +   E +  + EAY  + L   A +   +I
Sbjct: 197 VVGMLQQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKII 237


>gi|198282732|ref|YP_002219053.1| outer membrane assembly lipoprotein YfiO [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|198247253|gb|ACH82846.1| outer membrane assembly lipoprotein YfiO [Acidithiobacillus
           ferrooxidans ATCC 53993]
          Length = 261

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 96/201 (47%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           R +++ A   +   +++ A + F      +P+   A ++ L +A+  Y  G  + AA+  
Sbjct: 46  RALFQPAKHAMDRGDYAAAIKLFEDLETRYPYGPYAEQAQLDTAYSYYQRGDSEAAAAAA 105

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           E +I  +P +  VDY +YL G++Y Q I+    + R  +     +  + +R+ +S Y   
Sbjct: 106 ERFIKLHPANPYVDYAWYLKGIAYYQAIQGAQENPRPAEEAFSTLDTLAKRWPHSVYAAD 165

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           AR  +    N L  + ++I ++Y  R  YVA+  R   V+  Y  +   EEA+  L   Y
Sbjct: 166 ARLRMAKIINILGQRNLDICKFYYVRHAYVASANRCNTVITRYQLSTAREEALYYLTRDY 225

Query: 238 VALALMDEAREVVSLIQERYP 258
             L L   A+  V+++   YP
Sbjct: 226 RHLDLPQLAQTTVAVLAYNYP 246


>gi|218666506|ref|YP_002424926.1| competence lipoprotein ComL, putative [Acidithiobacillus
           ferrooxidans ATCC 23270]
 gi|218518719|gb|ACK79305.1| competence lipoprotein ComL, putative [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 251

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 96/201 (47%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           R +++ A   +   +++ A + F      +P+   A ++ L +A+  Y  G  + AA+  
Sbjct: 36  RALFQPAKHAMDRGDYAAAIKLFEDLETRYPYGPYAEQAQLDTAYSYYQRGDSEAAAAAA 95

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           E +I  +P +  VDY +YL G++Y Q I+    + R  +     +  + +R+ +S Y   
Sbjct: 96  ERFIKLHPANPYVDYAWYLKGIAYYQAIQGAQENPRPAEEAFSTLDTLAKRWPHSVYAAD 155

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           AR  +    N L  + ++I ++Y  R  YVA+  R   V+  Y  +   EEA+  L   Y
Sbjct: 156 ARLRMAKIINILGQRNLDICKFYYVRHAYVASANRCNTVITRYQLSTAREEALYYLTRDY 215

Query: 238 VALALMDEAREVVSLIQERYP 258
             L L   A+  V+++   YP
Sbjct: 216 RHLDLPQLAQTTVAVLAYNYP 236


>gi|332141866|ref|YP_004427604.1| Competence lipoprotein ComL [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327551888|gb|AEA98606.1| Competence lipoprotein ComL [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 254

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/215 (21%), Positives = 104/215 (48%), Gaps = 10/215 (4%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +++Y++A   ++  NFS A +  +     +PF  ++ +  L   +  Y +GK ++  +  
Sbjct: 38  QQLYDRAKQSMEVGNFSAAAQTLSALDSRYPFGPLSHQVQLDLIYSYYKSGKNEETLATI 97

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVE 167
           + +I   P   +VDY YY+ G++  +           I     D   ++   +   R+++
Sbjct: 98  DRFIRLNPNHSDVDYAYYMRGLTNMESDSNLFQELMNIDRTDRDPSKSRQAFEDFRRLIQ 157

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
           +Y +S Y   A+  +   +++LA  E+ I R+Y++R  YVAA  R + V+ ++ +    +
Sbjct: 158 QYPDSKYAADAKQRMVHIKDRLARYEIAIARFYMRRQAYVAAANRGRYVIEHFPNTTQVQ 217

Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           +A+  +V +Y  L L +     +  ++  YP   +
Sbjct: 218 QALEIMVSSYEQLGLKELRDNAMKTLKLNYPDSEF 252


>gi|90408472|ref|ZP_01216631.1| hypothetical protein PCNPT3_03216 [Psychromonas sp. CNPT3]
 gi|90310404|gb|EAS38530.1| hypothetical protein PCNPT3_03216 [Psychromonas sp. CNPT3]
          Length = 241

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 104/211 (49%), Gaps = 10/211 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y+ A   L+  N+ KA E        +PF   + +  L   +  Y   +   A +  + 
Sbjct: 27  LYQDAKAQLQAANYEKASEILEALDSRYPFGPHSDQVQLDLIYSYYKRDESALALANIDR 86

Query: 120 YITQYPESKNVDYVYYLVGMS-------YAQMIRDVPYDQRATKLMLQYM---SRIVERY 169
           ++   P   ++DY+YY+ G++       + Q + ++    R     LQ     S++V+ Y
Sbjct: 87  FMRLNPTHPDLDYLYYMRGLTQIAADQEFFQSLFNIERFDRDPSHALQAFKDFSQLVKFY 146

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
             S Y   A+ ++   +++LA  E+ I ++Y KR  Y+A+I R +++L NY D++  E+A
Sbjct: 147 PKSQYAADAQLHLIDIKSRLARYELSIAKWYFKREAYIASINRTKIILNNYPDSDSIEDA 206

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260
           +  +++ Y  L L+      +++++  YP+ 
Sbjct: 207 LVLMIKGYERLNLVTPKTNALAILKMNYPKN 237


>gi|332974184|gb|EGK11118.1| DNA uptake lipoprotein family protein [Psychrobacter sp.
           1501(2011)]
          Length = 387

 Score = 73.2 bits (178), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 103/218 (47%), Gaps = 14/218 (6%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           TD +Y    Y++AV  + +  +  A E  ++    +P    A ++LL   + Q+ + +Y 
Sbjct: 60  TDAQY----YKEAVDAMDKGRYIYAAEQLSELRTFYPTGAYAEQALLDLMYSQFQSNEYA 115

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQM-------IRDVPYDQRAT---KLMLQY 161
            A +  E++I  YP +  VDY YY+ G++  Q        I  +    R T   +L    
Sbjct: 116 LAVTSAEQFIKLYPRNNQVDYAYYVRGVANMQAGTSSLLNITKLQQAHRDTSYYRLAFGN 175

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
              ++ ++ NS Y   A   +T   NQ A  E+   R+Y+KR  YVAA  R + V   + 
Sbjct: 176 FQELLAKFPNSSYAPDAAQRMTYIYNQFAESELSAARWYIKREAYVAAANRAKWVFQYFP 235

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            ++   EA+A L      L L D A++  +L+Q  YP+
Sbjct: 236 QSQQVPEAIAILAYTNEQLGLNDLAQQYKTLLQINYPE 273


>gi|123441244|ref|YP_001005231.1| outer membrane protein assembly complex subunit YfiO [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|332160280|ref|YP_004296857.1| outer membrane protein assembly complex subunit YfiO [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|122088205|emb|CAL10993.1| putative lipoprotein [Yersinia enterocolitica subsp. enterocolitica
           8081]
 gi|318604492|emb|CBY25990.1| putative component of the lipoprotein assembly complex (forms a
           complex with YaeT, YfgL, and NlpB) [Yersinia
           enterocolitica subsp. palearctica Y11]
 gi|325664510|gb|ADZ41154.1| outer membrane protein assembly complex subunit YfiO [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|330863601|emb|CBX73711.1| UPF0169 lipoprotein yfiO [Yersinia enterocolitica W22703]
          Length = 243

 Score = 73.2 bits (178), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 104/233 (44%), Gaps = 15/233 (6%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
           A   LV     S++DV  D+        E+Y  A   L++ NF  A          +PF 
Sbjct: 11  ATLSLVLTGCSSNKDVVPDNPP-----SELYATAQQKLQDGNFKGAITQLEALDNRYPFG 65

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM------ 144
             +++  L   +  Y +     A +  + ++   P   N+DYV Y+ G++   +      
Sbjct: 66  PYSQQVQLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVLYMRGLTDMALDDSALQ 125

Query: 145 ----IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
               I     D +  K   +  +++++ Y NS Y   A+  +   +++LA  E+ + +YY
Sbjct: 126 GFFGIDRSDRDPQHAKAAFRDFNQLIQSYPNSQYATDAQKRLMFLKDRLAKHELAVAQYY 185

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            KRG YVA + R + +L +Y D +   +A+  +  AY  L L  +A +V  +I
Sbjct: 186 TKRGAYVAVVNRVEQMLRDYPDTQATRDALPLMENAYKQLQLNAQADKVAKII 238


>gi|311693417|gb|ADP96290.1| DNA uptake lipoprotein [marine bacterium HP15]
          Length = 291

 Score = 73.2 bits (178), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 102/209 (48%), Gaps = 10/209 (4%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YE A   +   NF++A +  +     +PF   A ++ L   + +Y     + + +  + +
Sbjct: 49  YENAREAMTSGNFNEAEQNLDALETYYPFGRYAEQAQLDLIYARYQNLDLEGSRAAADRF 108

Query: 121 ITQYPESKNVDYVYYLVGM-SYAQMI----RDVPYD--QRATKLMLQYM---SRIVERYT 170
           +   P+S + DY  Y+ G+ SY   I    R  P D   R     LQ     S ++ RY 
Sbjct: 109 LRLNPQSDHADYALYMRGLASYNLDIGLAARYFPIDVAARDPGEQLQSFRDFSELLNRYP 168

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
           +S YV  AR  +   RN++A  E+   RYY+KR  YVAA  R + ++ NY  A   EEA+
Sbjct: 169 DSQYVADARQRMIAVRNRMAELELYAARYYVKRQAYVAANNRARYIIENYPTATVTEEAL 228

Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQ 259
             L E +  L L   +++ +++++  +P+
Sbjct: 229 IILAETFRFLELRKGSQDAIAMLRTNFPE 257


>gi|238790741|ref|ZP_04634502.1| hypothetical protein yfred0001_15820 [Yersinia frederiksenii ATCC
           33641]
 gi|238721182|gb|EEQ12861.1| hypothetical protein yfred0001_15820 [Yersinia frederiksenii ATCC
           33641]
          Length = 240

 Score = 72.8 bits (177), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 104/233 (44%), Gaps = 15/233 (6%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
           A   LV     S++DV  D+        E+Y  A   L++ NF  A          +PF 
Sbjct: 8   ATLSLVLTGCSSNKDVVPDNPP-----SELYATAQQKLQDGNFKGAITQLEALDNRYPFG 62

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM------ 144
             +++  L   +  Y +     A +  + ++   P   N+DYV Y+ G++   +      
Sbjct: 63  PYSQQVQLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVLYMRGLTDMALDDSALQ 122

Query: 145 ----IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
               I     D +  K   +  +++++ Y NS Y   A+  +   +++LA  E+ + +YY
Sbjct: 123 GFFGIDRSDRDPQHAKAAFRDFNQLIQSYPNSQYATDAQKRLIFLKDRLAKHELAVAQYY 182

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            KRG YVA + R + +L +Y D +   +A+  +  AY  L L  +A +V  +I
Sbjct: 183 TKRGAYVAVVNRVEQMLRDYPDTQATRDALPLMENAYKQLQLNAQADKVAKII 235


>gi|255610036|ref|XP_002539124.1| Competence lipoprotein comL precursor, putative [Ricinus communis]
 gi|223508511|gb|EEF23259.1| Competence lipoprotein comL precursor, putative [Ricinus communis]
          Length = 169

 Score = 72.8 bits (177), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 73/148 (49%), Gaps = 13/148 (8%)

Query: 124 YPESKNVDYVYYLVGMSY-----------AQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           +P   N+DY YYL G++             Q I D   D +  ++       +VER+  S
Sbjct: 2   HPNHPNLDYAYYLKGLATFNERGIMEKYTKQEIND--RDPKTLRVSFNAFKELVERFPTS 59

Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
            Y K +   +    N LA  E+ + RYY++R  YVAA+ R + VL  Y ++   E+A+  
Sbjct: 60  RYAKDSTQRMVYLVNTLAMHEMHVARYYMQRKAYVAALNRTRYVLETYPNSSSVEDALVT 119

Query: 233 LVEAYVALALMDEAREVVSLIQERYPQG 260
           ++ AY A+ + D   + + +++  YP+ 
Sbjct: 120 MISAYDAMDMADLKADTLRILKTNYPEN 147


>gi|325265796|ref|ZP_08132483.1| competence lipoprotein ComL [Kingella denitrificans ATCC 33394]
 gi|324982779|gb|EGC18404.1| competence lipoprotein ComL [Kingella denitrificans ATCC 33394]
          Length = 268

 Score = 72.8 bits (177), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 93/204 (45%), Gaps = 13/204 (6%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y +A   L   N+S A   +       P      +SLL SA+  Y   +  QA +L   
Sbjct: 39  LYSEARNALNSGNYSHANALYGVLRARQPDGRYTEQSLLDSAYAHYKNEEMSQALALLSR 98

Query: 120 YITQYPESKNVDYVYYLVGM-------SYAQMIRDVPYDQR---ATKLMLQYMSRIVERY 169
           +   YP S ++DY  YL G+       S+ + +    +  R   A +   +   ++V R+
Sbjct: 99  FERNYPASVDMDYALYLKGLIFFAEDQSFLRKLASQDWSDRDPEANRRAFRVFEQLVNRF 158

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
             S Y + +R  +    + L   E+ I RYY KR  YVAA  R Q VL  Y +  + EEA
Sbjct: 159 PQSKYAEDSRRRMAQLVDALGGHEIAIARYYAKRHAYVAANNRAQRVLQQYQNTRYVEEA 218

Query: 230 MARLVEAYVALA---LMDEAREVV 250
           +A ++ +Y  +    L D+ R V+
Sbjct: 219 LAIMIFSYEKMGNTQLADDTRRVL 242


>gi|284007739|emb|CBA73553.1| lipoprotein [Arsenophonus nasoniae]
          Length = 269

 Score = 72.4 bits (176), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 12/206 (5%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y  +   L+  N+  A +        +PF   A+++ L   +  Y + +   A +  +
Sbjct: 60  DIYTSSQEKLQSGNYKGAIKLLETLDNRYPFGPYAQQAQLDMIYAYYKSAELPLAIATID 119

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPY-----------DQRATKLMLQYMSRIVE 167
            +I   P   N+DYV Y+ G++ AQ + D              D +   +  +  S++V 
Sbjct: 120 RFIRLNPTHPNIDYVLYMRGLT-AQALDDSALQDFFGIDRSDRDPQHALVAFRDFSQLVR 178

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y NS Y   A   +   + +LA  E+ I +YY KRG YVA I R + +L NY D +   
Sbjct: 179 FYPNSIYATDASKRLAFLKERLAKYELAIVKYYNKRGAYVAVINRTEQMLKNYPDTQSTR 238

Query: 228 EAMARLVEAYVALALMDEAREVVSLI 253
            A+  +  AY  L L  E  +V +LI
Sbjct: 239 NALKYMEIAYNQLGLSQEKNKVAALI 264


>gi|260221243|emb|CBA29611.1| Competence lipoprotein comL [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 268

 Score = 72.4 bits (176), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 92/181 (50%), Gaps = 16/181 (8%)

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL---------VGMSYA 142
           +A+++ L  A+ Q+ AG+  Q+ +  E +I  +P S  +DY  YL         +G+  +
Sbjct: 72  LAQQAQLDKAYAQFKAGEQAQSLATLERFIKLHPASPALDYAIYLRGIVNFNDDLGLLSS 131

Query: 143 QMIRDVP-YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
              +D+   DQ+A K   +    +  R+ +S Y   A+  +      LA  EV + +YY 
Sbjct: 132 ITRQDLAERDQKAAKESFESFKELTTRFPDSKYAPDAQQRMNYIVGSLAQYEVHVAKYYY 191

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAREVVSLIQERYP 258
           KRG Y+AA  R Q  + +Y D    EEA+  L ++Y AL    L D+A+ V   +++ +P
Sbjct: 192 KRGAYLAAANRAQQCITDYRDVPATEEALFILYKSYDALGMEQLRDDAKRV---LEKNFP 248

Query: 259 Q 259
           Q
Sbjct: 249 Q 249


>gi|237809511|ref|YP_002893951.1| outer membrane assembly lipoprotein YfiO [Tolumonas auensis DSM
           9187]
 gi|237501772|gb|ACQ94365.1| outer membrane assembly lipoprotein YfiO [Tolumonas auensis DSM
           9187]
          Length = 253

 Score = 72.4 bits (176), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 107/245 (43%), Gaps = 23/245 (9%)

Query: 30  IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
           +++  L G    S +    D   +V     +Y++A   L   ++ +A +        +PF
Sbjct: 13  LSLSLLAGCSSSSDKPKVPDEPLEV-----LYKQAQSKLHNGDYERAVDILEALDSRYPF 67

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ------ 143
              A +  L   +  Y      QA +  + ++   P  K+VDYVYY+ G++  Q      
Sbjct: 68  GPYASQVQLQLIYAYYKKEDTAQAIANIDRFLRLNPTHKDVDYVYYMRGLANMQEDYNFF 127

Query: 144 --------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
                     RD  Y ++A K        +++ Y +S Y   AR      +N+LA  ++ 
Sbjct: 128 HDKFGIDRSDRDPQYARQAFK----DFQLVLKNYPDSLYASDARARAVYLKNRLAKFDLA 183

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           I  +Y++R  +V+A  R + ++ NY D E  + A+  +V+AY  + L D A+    ++  
Sbjct: 184 IADFYMRREAWVSAANRAKYLIENYPDTEMTQPALEIMVQAYEKMDLTDLAKHARQMLST 243

Query: 256 RYPQG 260
            YP  
Sbjct: 244 NYPDS 248


>gi|323497825|ref|ZP_08102839.1| putative lipoprotein [Vibrio sinaloensis DSM 21326]
 gi|323317172|gb|EGA70169.1| putative lipoprotein [Vibrio sinaloensis DSM 21326]
          Length = 241

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 105/240 (43%), Gaps = 17/240 (7%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
           T+   +A+  LVG    SS ++    V DV    E+Y +A + L+  N+  A        
Sbjct: 5   TLSGLLALSVLVGC--SSSEEI----VPDVP-PSELYSEAQISLQSGNWLSAISQLEALD 57

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
             +PF   + +  L   +  Y         +  E +    P  + +D+V Y+ G+++   
Sbjct: 58  SRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIERFTRLNPTHEKLDWVLYMRGLTHMAQ 117

Query: 145 IRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
            R+  +D              K       R++ERY  SPY + A+  +   +N+LA  ++
Sbjct: 118 DRNFMHDLFNVDRSDRDPEPVKKAFADFKRLLERYPTSPYAEDAQKRMLALKNRLAEYDL 177

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
               +YL+R  ++AAI R Q +   Y D   A E++   +EAY AL L D  +    LI+
Sbjct: 178 ATADFYLRREAWIAAINRTQELQKTYPDTVAARESLQIQLEAYKALGLEDAIKRTQQLIE 237


>gi|312796111|ref|YP_004029033.1| lipoprotein, ComL family [Burkholderia rhizoxinica HKI 454]
 gi|312167886|emb|CBW74889.1| Lipoprotein, ComL family [Burkholderia rhizoxinica HKI 454]
          Length = 276

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 10/212 (4%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
            +++Y +A       ++ K  +YF       PF   A+++ +  A+ Q+   +   A   
Sbjct: 42  NQKLYSEAQDAFTAGDWGKCSKYFELLQGRDPFGHFAQQAQINVAYCQWKDNETAAAEQA 101

Query: 117 GEEYITQYPESKNVDYVYYLVGM-SYAQMI--------RDVP-YDQRATKLMLQYMSRIV 166
            + +I  +P+  ++ Y YYL G+ S+   +        +D+   D +A +        +V
Sbjct: 102 VDRFIQLHPDHPDIAYAYYLKGLISFNDDLGLFGRFAGQDMSERDPKALRDSYDAFRVVV 161

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
           E+Y +S Y   A   +    N LA+ EV    YY +RG YVAAI R QLVL  Y +A   
Sbjct: 162 EKYPSSKYAPDAAQRMRYIVNALASHEVHTADYYYRRGAYVAAINRAQLVLKEYKNAPAT 221

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           E+A+  ++ +Y AL     A +   ++   +P
Sbjct: 222 EDALHVMILSYRALNQPQLADDTQRVLTSTFP 253


>gi|224368344|ref|YP_002602507.1| putative DNA uptake lipoprotein [Desulfobacterium autotrophicum
           HRM2]
 gi|223691060|gb|ACN14343.1| putative DNA uptake lipoprotein [Desulfobacterium autotrophicum
           HRM2]
          Length = 201

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 79/167 (47%)

Query: 68  LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
            ++Q++  A + F      +PF+  A  + L  A   +   +Y +A    +E+   +P++
Sbjct: 16  FRDQDYKYAIKSFTTLKDWYPFSKYAILAELKIADAHFQLEEYDEAIFAYQEFENLHPKN 75

Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           + + YV Y  G  +   I  V  DQR         +R+V R+ ++P    A  ++ V   
Sbjct: 76  EAIPYVIYQTGRCWFDRIDTVDRDQRCALKAQTEFNRLVHRFPDAPESAKAAQHIEVCIK 135

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
            LA  E+ +  +Y K   Y AA+ RF+ + ANY D    +EA+ R+ 
Sbjct: 136 SLAGHELYVAEFYFKAKHYKAAMKRFEHLFANYPDTREGKEALPRIA 182


>gi|332704216|ref|ZP_08424304.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio africanus
           str. Walvis Bay]
 gi|332554365|gb|EGJ51409.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio africanus
           str. Walvis Bay]
          Length = 243

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/196 (21%), Positives = 92/196 (46%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
           FF   VC L+          Y    T      E+++     + +++++ A EYF +    
Sbjct: 6   FFIFTVCALIAASSGCGVIDYFFIPTPEETALELFQAGQEEMAQEDWADAVEYFTKLRDR 65

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
           FPF+    ++ L+ A   ++ GKY +A    +E+ + +P    + YV + +GM+  + + 
Sbjct: 66  FPFSPYTVQAELLLANSHFNDGKYAEALQAYKEFESLHPSDPRIPYVLFQIGMANYKSMG 125

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
            +   Q      +++  R+++ Y +S +   A+ ++ + R +LA  E+ +  +Y +   +
Sbjct: 126 SIDKPQHQAAEAVEFFRRLIQSYPDSEFAPKAKDHLLLARRRLAEHELFVADFYWRAERF 185

Query: 207 VAAIPRFQLVLANYSD 222
            +A  R+  V+  Y D
Sbjct: 186 GSAWERYSFVVEQYKD 201


>gi|317153532|ref|YP_004121580.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316943783|gb|ADU62834.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 242

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 80/165 (48%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +E+YE  +  +  + +  A +YF++    FPF+  A ++ L      +    Y  A    
Sbjct: 35  QELYEAGMDAMGNKEYGDAQQYFSKLKDRFPFSPFALRAELALGDAYFLDADYLMALDSY 94

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           +E+   +P  +++ YV Y +G +   + R +   Q   +  L+Y  R+ E Y +S Y   
Sbjct: 95  KEFEALHPSHESIPYVLYQIGSADFNLFRSIDRRQENIQEGLEYFYRLRETYPDSEYATA 154

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
           +   +T GR  LA  EV +  ++ +  +Y  A  R+Q V+ N+SD
Sbjct: 155 SEDMITKGRRILAEHEVYVADFFWRTEQYGPAWNRYQYVVENFSD 199


>gi|238021800|ref|ZP_04602226.1| hypothetical protein GCWU000324_01703 [Kingella oralis ATCC 51147]
 gi|237866414|gb|EEP67456.1| hypothetical protein GCWU000324_01703 [Kingella oralis ATCC 51147]
          Length = 276

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 117/250 (46%), Gaps = 17/250 (6%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQR----EVYEKAVLFLKEQNFSKAYEYFN 81
           +F ++AV       +  ++ V +DS T +  Q     ++Y +A   L  +N+ +A + + 
Sbjct: 10  LFIALAVALTGCAFKDKAKKVKIDSDT-IAAQNWSNDQLYNEARSELNAKNYDRANKLYE 68

Query: 82  QC-SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM- 139
              +R  P      +SLL +A+  Y   +  +A +L   +   YP S ++DY  YL G+ 
Sbjct: 69  ILRARQAP-GRYTEQSLLDAAYAHYKNEEPAKALALLSRFEHNYPASIDMDYALYLRGLV 127

Query: 140 ------SYAQMIRDVPY---DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
                 S+ + +    +   D +A +   +  + +V RY +S Y + AR  +    + L 
Sbjct: 128 LFDEDQSFLRKLASQDWSDRDPQANRRAYRVFNELVTRYPDSKYAEDARKRMAQLVDALG 187

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
             ++ I +YY KRG Y+AA  R Q V+  + +    EEA+A +   Y  +     A +  
Sbjct: 188 GHQIAIAKYYAKRGAYLAANNRAQEVIKQFQNTRFVEEALAIMAYTYGKMGNEQSANDTK 247

Query: 251 SLIQERYPQG 260
            ++Q+ +PQ 
Sbjct: 248 RVLQQNFPQS 257


>gi|37525234|ref|NP_928578.1| outer membrane protein assembly complex subunit YfiO [Photorhabdus
           luminescens subsp. laumondii TTO1]
 gi|36784661|emb|CAE13561.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 244

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 12/206 (5%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y K    L++ ++  A +        +PF   +++  L   +  Y +     A +  +
Sbjct: 35  EIYSKGQEKLQKGSYPDAIKQLETLDNRYPFGPYSQQVQLDLIYAYYKSSDLPMALASID 94

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPY-----------DQRATKLMLQYMSRIVE 167
            +I   P   N+DYV Y+ G++ +Q + + P            D    ++  +  S++V 
Sbjct: 95  RFIRLNPTHPNIDYVLYMRGLT-SQALDNSPLQSFFGIDHSDRDPEHARVAFKDFSQLVR 153

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            + NS Y   A   +   + +LA  E+ +  YY KRG YVA + R + +L +Y D +   
Sbjct: 154 YHPNSLYTADAIKRLMFIKERLAKYELSVVEYYNKRGAYVAVVNRIEQMLRDYPDTQSTL 213

Query: 228 EAMARLVEAYVALALMDEAREVVSLI 253
           EA+  +  AY  L L+ +A +V  LI
Sbjct: 214 EALPYMKSAYTHLGLIAQADKVAKLI 239


>gi|315634973|ref|ZP_07890254.1| DNA uptake lipoprotein [Aggregatibacter segnis ATCC 33393]
 gi|315476235|gb|EFU66986.1| DNA uptake lipoprotein [Aggregatibacter segnis ATCC 33393]
          Length = 261

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 93/207 (44%), Gaps = 10/207 (4%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           ++ +Y     +L++ ++S+A  Y N  S  FP +  + +  L   +  Y    Y +    
Sbjct: 32  EQTLYSTGQTYLQDGDYSQAIRYLNAVSSRFPGSSYSEQVQLNLIYAYYKTQDYSETLVT 91

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----QRAT------KLMLQYMSRIV 166
            + +I ++P S ++DY  Y+ G++ + +  +   D     RAT      K        +V
Sbjct: 92  IDRFIQRFPNSSHLDYALYMAGLTNSALGDNFFQDFFGVDRATRENTSIKTAFANFQNLV 151

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
           + + NSPY   A   +T  +  LA  E+ I ++Y KR  YVA   R   +L  Y D +  
Sbjct: 152 QHFPNSPYTPDALARMTYIKASLARHELAIAKFYFKRDAYVATANRVVSMLKLYPDTQAT 211

Query: 227 EEAMARLVEAYVALALMDEAREVVSLI 253
            +A+  +  +Y  + L   A +   +I
Sbjct: 212 LDALPLMKASYEKMNLTHLADQTAKII 238


>gi|319942385|ref|ZP_08016699.1| hypothetical protein HMPREF9464_01918 [Sutterella wadsworthensis
           3_1_45B]
 gi|319804073|gb|EFW00981.1| hypothetical protein HMPREF9464_01918 [Sutterella wadsworthensis
           3_1_45B]
          Length = 262

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 105/241 (43%), Gaps = 18/241 (7%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L++  + A C    W +   +D  LD   +     ++Y +A + L + N+++A +Y+ + 
Sbjct: 18  LSVTLATASC---SWLQSLDKDQTLDWSAE-----KLYSEARVALDDSNWTQAKDYYQKL 69

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +PF   A+++ +   +  +  G    A    + ++  YP   N DYV YL  ++   
Sbjct: 70  EARYPFGQYAQQAQIELIYATWKDGDAPGAVQAADRFLQTYPNHANADYVMYLKALATLN 129

Query: 144 MIRD----------VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
                            D  A++        +V RY +S +   AR  +       A  E
Sbjct: 130 ETDSWFNKLAGEDLAERDANASREAFDIFKELVMRYPDSRFTPEARRRMHGLVLAQAEHE 189

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           ++  RYY  R  YVAAI R Q V+  + +    ++A+  + ++Y AL L + A +   +I
Sbjct: 190 LKTARYYFVRNAYVAAIERAQRVVREFQNTPMRDDALELIAQSYEALKLTELAADTRRII 249

Query: 254 Q 254
           +
Sbjct: 250 E 250


>gi|261250363|ref|ZP_05942939.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio orientalis CIP
           102891]
 gi|260939479|gb|EEX95465.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio orientalis CIP
           102891]
          Length = 241

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 11/211 (5%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y  A + L+  N+  A E        +PF   + +  L   +  Y         +  E
Sbjct: 32  ELYSDAQISLQSGNWLTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIE 91

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVER 168
            ++   P  + +D+V Y+ G+++    R+  +D              K       +++ER
Sbjct: 92  RFMRLNPTQEKLDWVLYMRGLTHMAQDRNFMHDLFNVDRSDRDPEPVKKAFADFKKLLER 151

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NSPY + ++  +   +N+LA  ++    +YL+R  ++AAI R Q +   Y D E A +
Sbjct: 152 YPNSPYAEDSQKRMYALKNRLAEYDLATADFYLRREAWIAAINRTQELQKTYPDTEAARK 211

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           ++   +EAY  L L D       LI E  PQ
Sbjct: 212 SLDIQLEAYKQLNLQDAVERTEKLI-ELNPQ 241


>gi|149907609|ref|ZP_01896356.1| hypothetical protein PE36_06967 [Moritella sp. PE36]
 gi|149809279|gb|EDM69208.1| hypothetical protein PE36_06967 [Moritella sp. PE36]
          Length = 245

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 16/224 (7%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L I  S+A+    G   ++  +V            E+Y  A   L+  NF  A E     
Sbjct: 7   LAISLSLALVMATGCSSKTEPNVPDKPAI------ELYSIAQQSLQAGNFVSAIETLEAL 60

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA- 142
              +PF     +  L   +  Y      QA +  + +I   P  K++DYVYY+ G++   
Sbjct: 61  DTRYPFGPHTVQVQLDLIYAYYKNSDTAQALANIDRFIRLNPSHKDIDYVYYMRGLTNMG 120

Query: 143 ---QMIRDVPYDQRATK------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
               +  D+    R+ +            +R+++RY  S YV  A+      +++LA  E
Sbjct: 121 ADYNLFHDLFNIDRSDRDPSYANAAFNDFTRLIKRYPQSEYVADAQKRAIAIKSRLARYE 180

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           +    YY+KR  Y+AAI R Q ++ N++D E    A+  +++AY
Sbjct: 181 LSAAEYYMKRKAYIAAIQRAQHIIDNFADTESRTGALKVMIKAY 224


>gi|258592923|emb|CBE69232.1| putative Tetratricopeptide TPR_2 precursor [NC10 bacterium 'Dutch
           sediment']
          Length = 304

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/212 (21%), Positives = 104/212 (49%), Gaps = 6/212 (2%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
           TI FS++ C   G +  S +   + + +D    +E+  +A      + + +  ++  +  
Sbjct: 16  TILFSVSGC--AGLDLFSPKQAEVPAGSD----QELMSRAEAAFALKQYDEGRKHLQRLI 69

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
            +FP + +   + L S    +   ++ ++ +  + ++  +P+ + +D   Y +G+SY + 
Sbjct: 70  NNFPESELVPTARLNSGRTYFDEKRFDESRAEYQRFMELFPQHEQLDEAQYYIGLSYFRQ 129

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
           +  V  DQ  T    +    ++  + NS +V  A+  +     QL  +E+ +G++Y  R 
Sbjct: 130 MEKVDRDQTMTNNAAREFRTLINDFRNSQFVSDAQAKLAECYRQLVQRELYVGKFYFHRE 189

Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
            Y AAIPRF+ +L  Y  +++ ++A+  L E+
Sbjct: 190 AYGAAIPRFESILKEYPGSQYDDQALYYLGES 221


>gi|251788632|ref|YP_003003353.1| outer membrane protein assembly complex subunit YfiO [Dickeya zeae
           Ech1591]
 gi|247537253|gb|ACT05874.1| outer membrane assembly lipoprotein YfiO [Dickeya zeae Ech1591]
          Length = 243

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 105/243 (43%), Gaps = 26/243 (10%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           A T+  ++A C        +S+D   D     R   E+Y  A   L++ NF  A      
Sbjct: 10  AATLSLTLAGC-------SNSKDAVPD-----RPPSELYATAQEKLQDGNFKAAITQLEA 57

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
               +PF   +++  L   +  Y + +   A +  + +I   P   NVDYV Y+ G++  
Sbjct: 58  LDNRYPFGPYSQQVQLDLIYAYYKSAELPLAQASIDRFIRLNPTHPNVDYVLYMRGLT-- 115

Query: 143 QMIRD------------VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
            M +D               D +  +   +  S++++ Y NS Y       +   + +LA
Sbjct: 116 NMAQDDSALQGFFGVDRSDRDPQYARAAFKAFSQLLQGYPNSQYATDTSKRLAFLKERLA 175

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
             E+ + +YY KRG YVA + R + +L +Y D +    A+  +  AY  L L  +A +V 
Sbjct: 176 KYELSVAQYYTKRGAYVAVVNRVEQMLKDYPDTQATRTALPLMENAYRELQLTAQADKVA 235

Query: 251 SLI 253
            +I
Sbjct: 236 KII 238


>gi|22124819|ref|NP_668242.1| outer membrane protein assembly complex subunit YfiO [Yersinia
           pestis KIM 10]
 gi|45440504|ref|NP_992043.1| outer membrane protein assembly complex subunit YfiO [Yersinia
           pestis biovar Microtus str. 91001]
 gi|51595195|ref|YP_069386.1| outer membrane protein assembly complex subunit YfiO [Yersinia
           pseudotuberculosis IP 32953]
 gi|108808760|ref|YP_652676.1| outer membrane protein assembly complex subunit YfiO [Yersinia
           pestis Antiqua]
 gi|108810983|ref|YP_646750.1| outer membrane protein assembly complex subunit YfiO [Yersinia
           pestis Nepal516]
 gi|145600173|ref|YP_001164249.1| outer membrane protein assembly complex subunit YfiO [Yersinia
           pestis Pestoides F]
 gi|153948219|ref|YP_001402172.1| outer membrane protein assembly complex subunit YfiO [Yersinia
           pseudotuberculosis IP 31758]
 gi|153997672|ref|ZP_02022772.1| putative lipoprotein [Yersinia pestis CA88-4125]
 gi|162419347|ref|YP_001607808.1| outer membrane protein assembly complex subunit YfiO [Yersinia
           pestis Angola]
 gi|165926624|ref|ZP_02222456.1| putative lipoprotein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165936801|ref|ZP_02225368.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. IP275]
 gi|166010083|ref|ZP_02230981.1| putative lipoprotein [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166213080|ref|ZP_02239115.1| putative lipoprotein [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167399369|ref|ZP_02304893.1| putative lipoprotein [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167421522|ref|ZP_02313275.1| putative lipoprotein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167423440|ref|ZP_02315193.1| putative lipoprotein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167470272|ref|ZP_02334976.1| putative lipoprotein [Yersinia pestis FV-1]
 gi|170025567|ref|YP_001722072.1| outer membrane protein assembly complex subunit YfiO [Yersinia
           pseudotuberculosis YPIII]
 gi|186894213|ref|YP_001871325.1| outer membrane protein assembly complex subunit YfiO [Yersinia
           pseudotuberculosis PB1/+]
 gi|218930303|ref|YP_002348178.1| outer membrane protein assembly complex subunit YfiO [Yersinia
           pestis CO92]
 gi|229838894|ref|ZP_04459053.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229896562|ref|ZP_04511729.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis
           Pestoides A]
 gi|229899461|ref|ZP_04514604.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229901199|ref|ZP_04516322.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis
           Nepal516]
 gi|270489384|ref|ZP_06206458.1| outer membrane assembly lipoprotein YfiO [Yersinia pestis KIM D27]
 gi|294504992|ref|YP_003569054.1| putative lipoprotein [Yersinia pestis Z176003]
 gi|21957645|gb|AAM84493.1|AE013693_9 hypothetical protein y0911 [Yersinia pestis KIM 10]
 gi|45435361|gb|AAS60920.1| putative lipoprotein [Yersinia pestis biovar Microtus str. 91001]
 gi|51588477|emb|CAH20085.1| putative lipoprotein [Yersinia pseudotuberculosis IP 32953]
 gi|108774631|gb|ABG17150.1| lipoprotein [Yersinia pestis Nepal516]
 gi|108780673|gb|ABG14731.1| putative lipoprotein [Yersinia pestis Antiqua]
 gi|115348914|emb|CAL21871.1| putative lipoprotein [Yersinia pestis CO92]
 gi|145211869|gb|ABP41276.1| lipoprotein [Yersinia pestis Pestoides F]
 gi|149289309|gb|EDM39389.1| putative lipoprotein [Yersinia pestis CA88-4125]
 gi|152959714|gb|ABS47175.1| putative lipoprotein [Yersinia pseudotuberculosis IP 31758]
 gi|162352162|gb|ABX86110.1| putative lipoprotein [Yersinia pestis Angola]
 gi|165915450|gb|EDR34060.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. IP275]
 gi|165921552|gb|EDR38749.1| putative lipoprotein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165990990|gb|EDR43291.1| putative lipoprotein [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166205867|gb|EDR50347.1| putative lipoprotein [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166960441|gb|EDR56462.1| putative lipoprotein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167051873|gb|EDR63281.1| putative lipoprotein [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167057610|gb|EDR67356.1| putative lipoprotein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|169752101|gb|ACA69619.1| putative lipoprotein [Yersinia pseudotuberculosis YPIII]
 gi|186697239|gb|ACC87868.1| putative lipoprotein [Yersinia pseudotuberculosis PB1/+]
 gi|229681924|gb|EEO78017.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis
           Nepal516]
 gi|229687863|gb|EEO79936.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229695260|gb|EEO85307.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229700340|gb|EEO88372.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis
           Pestoides A]
 gi|262363057|gb|ACY59778.1| putative lipoprotein [Yersinia pestis D106004]
 gi|262366981|gb|ACY63538.1| putative lipoprotein [Yersinia pestis D182038]
 gi|270337888|gb|EFA48665.1| outer membrane assembly lipoprotein YfiO [Yersinia pestis KIM D27]
 gi|294355451|gb|ADE65792.1| putative lipoprotein [Yersinia pestis Z176003]
 gi|320016470|gb|ADW00042.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis
           biovar Medievalis str. Harbin 35]
          Length = 243

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 103/233 (44%), Gaps = 15/233 (6%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
           A   LV     S++DV  D+        E+Y  A   L++ NF  A          +PF 
Sbjct: 11  ATLSLVLTGCSSNKDVVPDNPP-----SELYATAQQKLQDGNFKGAITQLEALDNRYPFG 65

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM------ 144
             +++  L   +  Y +     A +  + ++   P   N+DYV Y+ G++   +      
Sbjct: 66  PYSQQVQLDLIYAYYKSADLPMAQASIDRFMRLNPTHPNIDYVLYMRGLTDMALDDSALQ 125

Query: 145 ----IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
               I     D +  +   +  +++++ Y NS Y   A+  +   +++LA  E+ + +YY
Sbjct: 126 GFFGIDRSDRDPQHARAAFRDFNQLIQNYPNSQYATDAQKRLVFLKDRLAKYELAVAQYY 185

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            KRG YVA + R   ++ +Y D +   +A+  +  AY  L L  +A +V  +I
Sbjct: 186 TKRGAYVAVVNRVDQMMRDYPDTQATRDALPLMENAYKQLQLNAQADKVAKII 238


>gi|227115224|ref|ZP_03828880.1| outer membrane protein assembly complex subunit YfiO
           [Pectobacterium carotovorum subsp. brasiliensis PBR1692]
          Length = 244

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 99/222 (44%), Gaps = 15/222 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           +S+D   DS        E+Y  A   L++ NF  A          +PF   +++  L   
Sbjct: 23  NSKDAVPDSPP-----SEIYANAQQKLQDGNFKAAITQLEALDNRYPFGPYSQQVQLDLI 77

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYD 151
           +  Y + +   A +  + ++   P   NVDYV Y+ G++   +          +     D
Sbjct: 78  YAYYKSAELPLAQASIDRFLRLNPTHPNVDYVLYMRGLTDMALDDSALQGFFGVDRSDRD 137

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
            +  +   +  S++++ Y NS Y   A   +   + +LA  E+ + +YY KRG YVA + 
Sbjct: 138 PQYARTAFRDFSKLIQGYPNSQYATDANKRLVYLKERLAKYELSVAQYYTKRGAYVAVVN 197

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           R + +L +Y D +  + A+  +  AY  L L  +A +V  +I
Sbjct: 198 RVEQMLRDYPDTQATKNALPLMENAYRELQLAAQADKVAKII 239


>gi|242240267|ref|YP_002988448.1| outer membrane protein assembly complex subunit YfiO [Dickeya
           dadantii Ech703]
 gi|242132324|gb|ACS86626.1| outer membrane assembly lipoprotein YfiO [Dickeya dadantii Ech703]
          Length = 243

 Score = 70.1 bits (170), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 96/219 (43%), Gaps = 19/219 (8%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D+V D R   E+Y  A   L+  NF  A          +PF   +++  L   +  Y + 
Sbjct: 25  DTVPD-RPPAELYATAQEKLQSGNFKAAITQLEALDNRYPFGPYSQQVQLDLIYAYYKSA 83

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI--------------RDVPYDQRA 154
               A +  + +I   P   NVDYV Y+ G++   +               RD  Y + A
Sbjct: 84  DLSLAQASIDRFIRLNPTHPNVDYVLYMRGLTNMALDDSALQGFFGVDRSDRDPQYARSA 143

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
            K      S++V+ Y  S Y   A   +   + +LA  E  + +YY KRG YVA + R +
Sbjct: 144 FKAF----SQLVQEYPRSQYATDASKRLAYIKERLAKYEFSVAQYYTKRGAYVAVVNRVE 199

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +L +Y D +   +A+  +  AY  L L+ EA +V  +I
Sbjct: 200 QMLKDYPDTQATRKALPLMENAYRELQLVGEADKVAKII 238


>gi|307132188|ref|YP_003884204.1| putative lipoprotein [Dickeya dadantii 3937]
 gi|306529717|gb|ADM99647.1| predicted lipoprotein [Dickeya dadantii 3937]
          Length = 244

 Score = 70.1 bits (170), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 105/243 (43%), Gaps = 26/243 (10%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           A T+  ++A C        +S+D   D     R   E+Y  A   L++ NF  A      
Sbjct: 10  AATLSLTLAGC-------SNSKDAVPD-----RPPSELYATAQEKLQDGNFKAAITQLEA 57

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
               +PF   +++  L   +  Y + +   A +  + +I   P   NVDYV Y+ G++  
Sbjct: 58  LDNRYPFGPYSQQVQLDLIYAYYKSAELPLAQASIDRFIRLNPTHPNVDYVLYMRGLT-- 115

Query: 143 QMIRD------------VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
            M +D               D +  +   +  S++++ Y NS Y       +   + +LA
Sbjct: 116 NMAQDDSTLQGFFGVDRSDRDPQYARSAFKAFSQLLQGYPNSQYATDTSKRLAFLKERLA 175

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
             E+ + +YY KRG YVA + R + +L +Y D +    A+  +  AY  L L  +A +V 
Sbjct: 176 KYELSVAQYYTKRGAYVAVVNRVEQMLKDYPDTQATRTALPLMENAYRELQLTAQADKVA 235

Query: 251 SLI 253
            +I
Sbjct: 236 KII 238


>gi|16272142|ref|NP_438345.1| hypothetical protein HI0177 [Haemophilus influenzae Rd KW20]
 gi|260580942|ref|ZP_05848766.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
 gi|1175182|sp|P44553|Y177_HAEIN RecName: Full=Putative UPF0169 lipoprotein HI_0177; Flags:
           Precursor
 gi|1573134|gb|AAC21847.1| lipoprotein, putative [Haemophilus influenzae Rd KW20]
 gi|260092431|gb|EEW76370.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
          Length = 262

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 16/221 (7%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
           S+DV   SV       E+Y K    L+E ++S+A  Y    +  FP +    +++L   +
Sbjct: 23  SKDVEQASV------NELYTKGTTSLQEGSYSEAIRYLKATTERFPGSVYQEQAMLDLIY 76

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA----QMIRDVPYDQRATK-- 156
             Y    Y Q   + + ++ Q+ +S N  Y  Y+ G++ A      I+D     RAT+  
Sbjct: 77  ANYKTQDYTQVLLMVDSFLHQFTQSPNQAYAVYMAGLTNAATGDNFIQDFFGIDRATRET 136

Query: 157 ----LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
                       +V  + NSPY + A   +   ++ LA  E+EI ++Y KR  +VA   R
Sbjct: 137 TSMRTAFSNFQNLVRVFPNSPYSQDALARMAYIKDALARHELEIAKFYAKRKAWVAVANR 196

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
              +L  Y D +   E +  + EAY  + L   A +   +I
Sbjct: 197 VVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKII 237


>gi|323143513|ref|ZP_08078193.1| outer membrane assembly lipoprotein YfiO [Succinatimonas hippei YIT
           12066]
 gi|322416707|gb|EFY07361.1| outer membrane assembly lipoprotein YfiO [Succinatimonas hippei YIT
           12066]
          Length = 264

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 106/247 (42%), Gaps = 16/247 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + KF L +    AV          ++D   +   D  Y   V + A   +   +F +A +
Sbjct: 12  MIKFFLPLIVGAAVALTACSSANYNKDEVPNIAPDAMY--SVAQNA---MASGDFQRAKQ 66

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
           Y       +PF  +A +  L   +V Y     ++ ++    ++   P S+  DYV Y+ G
Sbjct: 67  YLEAIDSRYPFGELADQVQLDLIYVYYKMRDSEKTSAQINRFMRLNPTSQYTDYVMYMTG 126

Query: 139 MSYAQMIRDVPYD----QRATKLMLQY------MSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++  QM  D+  D     R+ K   QY         ++E Y  S Y   A   +   + Q
Sbjct: 127 LNQIQMRSDILQDFIGLNRSQKDPTQYYEALKTFRNLIETYPESKYAADAHQRMIFIKQQ 186

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA +E+ I  YY +RG Y++ I   Q +L +Y   ++ E A+A +   Y  L L + A  
Sbjct: 187 LAEREMAIANYYYERGSYLSTIRHCQNILYSYRGTQYLEPALALMARCYDDLGLPEAAAN 246

Query: 249 VVSLIQE 255
             S +QE
Sbjct: 247 ARS-VQE 252


>gi|226941138|ref|YP_002796212.1| ComL [Laribacter hongkongensis HLHK9]
 gi|226716065|gb|ACO75203.1| ComL [Laribacter hongkongensis HLHK9]
          Length = 263

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 96/206 (46%), Gaps = 15/206 (7%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L   N+++A + +      +P+   A+++ +  A+  +   +   + +  +
Sbjct: 34  KLYSEARDELNSGNYTRAIKLYETLEARYPYGRYAQQAQMDLAYAHFKDQEPALSLAAAD 93

Query: 119 EYITQYPESKNVDYVYYLVGM-----------SYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +I  +P   NVDYVYYL G+            Y    R    D +A +        +V 
Sbjct: 94  RFIKLHPAHPNVDYVYYLKGLVNYNEDGGILSKYTGQDR-AERDPKAAREAFTSFRDLVV 152

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
           R+ +S Y   AR  +    + LA  E+ + RYY++R  Y+AA  R Q ++  + D+   E
Sbjct: 153 RFPDSRYAPDARVKMQNLVDGLAEHELFVARYYMRRSAYLAAANRAQGMIKEFPDSPFVE 212

Query: 228 EAMARLVEAYVALA---LMDEAREVV 250
           E+ A +V AY  L    L D+ R V+
Sbjct: 213 ESFAIMVTAYDKLGKTTLRDDTRRVL 238


>gi|315126098|ref|YP_004068101.1| TPR repeat-containing lipoprotein [Pseudoalteromonas sp. SM9913]
 gi|315014612|gb|ADT67950.1| TPR repeat-containing lipoprotein [Pseudoalteromonas sp. SM9913]
          Length = 254

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 112/237 (47%), Gaps = 12/237 (5%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           ++ K A  I FS++V  L      S+ D         R  + +YE A   L    +++A 
Sbjct: 4   KIGKRAFAIVFSVSVLSLGACS--SAPDQEDIQRVPNRSAQALYEDAKQTLDSGLYARAI 61

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           E        +PF   +++  +   +  Y +G  +QA +  + +I   P  K++DY+YY+ 
Sbjct: 62  ELLTAIDSRYPFGPFSKQVQMDLVYAHYQSGNTEQALATIDRFIRLNPNHKDLDYMYYMR 121

Query: 138 GMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           G+   +  ++             D + T++    +S +V+R+  S Y   A+  +    N
Sbjct: 122 GLVNIKADKNAFQEYFGVDRADRDAKRTRVAYTDLSTLVKRFPESDYAPEAKRRLVWLLN 181

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
           ++A  E+++  YY +R  Y+AA  R + V+ +YS + + + A+A + ++Y  L L +
Sbjct: 182 RMARYELKVATYYYEREAYLAAANRGKYVVEHYSQSSYLDAALAMMEKSYEKLGLTE 238


>gi|253990667|ref|YP_003042023.1| outer membrane protein assembly complex subunit YfiO [Photorhabdus
           asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253782117|emb|CAQ85281.1| conserved hypothetical protein [Photorhabdus asymbiotica]
          Length = 243

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 12/206 (5%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y      L++ N+  A          +PF   +++  L   +  Y +     A +  +
Sbjct: 34  EIYSAGQEKLRDGNYKAAITQLETLDNRYPFGPYSQQVQLDLIYAYYKSSDLPMALASID 93

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPY-----------DQRATKLMLQYMSRIVE 167
            ++   P   N+DYV Y+ G++ +Q + D              D    +   +  S++V 
Sbjct: 94  RFMRLNPTHPNIDYVLYMRGLT-SQALDDSTLQSFFGIDRSDRDPEHARASFRDFSQLVR 152

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y NS Y   AR  +   + +LA  E+ + +YY KRG YVA + R + +L +Y D +   
Sbjct: 153 HYPNSLYAADARKRLMFIKERLAKYELSVVKYYNKRGAYVAVVNRAEQMLHDYPDTQSTL 212

Query: 228 EAMARLVEAYVALALMDEAREVVSLI 253
           +A+  +  AY  L L  +A +V  LI
Sbjct: 213 KALPYMERAYTRLGLTAQADKVTKLI 238


>gi|271501680|ref|YP_003334706.1| outer membrane assembly lipoprotein YfiO [Dickeya dadantii Ech586]
 gi|270345235|gb|ACZ78000.1| outer membrane assembly lipoprotein YfiO [Dickeya dadantii Ech586]
          Length = 243

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 105/243 (43%), Gaps = 26/243 (10%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           A T+  ++A C        +S+D   D     R   E+Y  A   L++ NF  A      
Sbjct: 10  AATLSLTLAGC-------SNSKDAVPD-----RPPSELYATAQEKLQDGNFKAAITQLEA 57

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
               +PF   +++  L   +  Y + +   A +  + +I   P   NVDYV Y+ G++  
Sbjct: 58  LDNRYPFGPYSQQVQLDLIYAYYKSAELPLAQASIDRFIRLNPTHPNVDYVLYMRGLT-- 115

Query: 143 QMIRD------------VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
            M +D               D +  +   +  +++++ Y NS Y       +   + +LA
Sbjct: 116 NMAQDDSALQGFFGVDRSDRDPQYARAAFKAFNQLLQGYPNSQYATDTSKRLAFLKERLA 175

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
             E+ + +YY KRG YVA + R + +L +Y D +    A+  +  AY  L L  EA +V 
Sbjct: 176 KYELSVAQYYTKRGAYVAVVNRVEQMLKDYPDTQATRTALPLMENAYRELRLTAEADKVA 235

Query: 251 SLI 253
            +I
Sbjct: 236 RII 238


>gi|187923830|ref|YP_001895472.1| outer membrane assembly lipoprotein YfiO [Burkholderia phytofirmans
           PsJN]
 gi|187715024|gb|ACD16248.1| outer membrane assembly lipoprotein YfiO [Burkholderia phytofirmans
           PsJN]
          Length = 286

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 17/210 (8%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             ++Y +A   L   +F K  +YF       PF   A+++ +  A+  +   +   A   
Sbjct: 55  NNKLYTEANDALSGGDFGKCAKYFEMLEGRDPFGHFAQQAQINVAYCNWKDNENAAADQA 114

Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164
            + +I  +P+  ++ Y YYL GM +             Q + +   D ++ +        
Sbjct: 115 IDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSE--RDPKSLRESYDAFKV 172

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V++Y NS Y   A   +    N LA+ EV    YY +RG YVAAI R QL L  Y +A 
Sbjct: 173 VVDKYPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLALTQYKNAP 232

Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251
             E+A+  ++ +Y  L    L D+ + V++
Sbjct: 233 AIEDALHIMMLSYEKLNQPQLADDTKRVLA 262


>gi|261820450|ref|YP_003258556.1| outer membrane protein assembly complex subunit YfiO
           [Pectobacterium wasabiae WPP163]
 gi|261604463|gb|ACX86949.1| outer membrane assembly lipoprotein YfiO [Pectobacterium wasabiae
           WPP163]
          Length = 244

 Score = 69.7 bits (169), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 99/222 (44%), Gaps = 15/222 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           +S+D   DS        E+Y  A   L++ NF  A          +PF   +++  L   
Sbjct: 23  NSKDAVPDSPP-----SEIYANAQQKLQDGNFKAAITQLEALDNRYPFGPYSQQVQLDLI 77

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYD 151
           +  Y + +   A +  + ++   P   NVDYV Y+ G++   +          +     D
Sbjct: 78  YAYYKSAELPLAQASIDRFLRLNPTHPNVDYVLYMRGLTDMALDDSALQGFFGVDRSDRD 137

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
            +  +   +  S++++ Y NS Y   A   +   + +LA  E+ + +YY KRG YVA + 
Sbjct: 138 PQYARTAFRDFSKLIQGYPNSQYATDANKRLVYLKERLAKYELSVAQYYTKRGAYVAVVN 197

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           R + +L +Y D +  + A+  +  AY  L L  +A +V  +I
Sbjct: 198 RVEQMLRDYPDTQATKNALPLMESAYRELQLAAQADKVAKVI 239


>gi|170692347|ref|ZP_02883510.1| putative competence lipoprotein, ComL [Burkholderia graminis C4D1M]
 gi|170142777|gb|EDT10942.1| putative competence lipoprotein, ComL [Burkholderia graminis C4D1M]
          Length = 286

 Score = 69.7 bits (169), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 17/210 (8%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             ++Y +A   L   +F K  +YF       PF   A+++ +  A+  +   +   A   
Sbjct: 55  NNKLYTEANDALSGGDFGKCAKYFEMLEGRDPFGHFAQQAQINVAYCNWKDNEAAAADQA 114

Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164
            + +I  +P+  ++ Y YYL GM +             Q + +   D ++ +        
Sbjct: 115 IDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSE--RDPKSLRESYDAFKV 172

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V+RY NS Y   A   +    N LA+ EV    YY +RG YVAAI R QL L  Y +A 
Sbjct: 173 VVDRYPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLALKEYKNAP 232

Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251
             E+A+  ++ +Y  L    L D+ + V++
Sbjct: 233 AIEDALHIMMLSYQRLNQPQLADDTKRVLA 262


>gi|209522217|ref|ZP_03270854.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp. H160]
 gi|209497346|gb|EDZ97564.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp. H160]
          Length = 286

 Score = 69.7 bits (169), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 17/210 (8%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             ++Y +A   L   ++ K  +YF       PF   A+++ +  A+  +   +   A   
Sbjct: 55  NNKLYTEANDALTGGDWGKCAKYFELLEGRDPFGHFAQQAQINVAYCNWKDNENAAADQA 114

Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164
            + +I  +P+  ++ Y YYL GM +             Q + +   D ++ +        
Sbjct: 115 IDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSE--RDPKSLRESYDAFKV 172

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V+R+ NS Y   A   +    N LA+ EV    YY +RG YVAAI R QL L +Y +A 
Sbjct: 173 VVDRFPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLALRDYKNAP 232

Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251
             E+A+  ++ +Y  L    L D+ R V++
Sbjct: 233 AIEDALHIMILSYEKLNNQQLADDTRRVLA 262


>gi|50122270|ref|YP_051437.1| outer membrane protein assembly complex subunit YfiO
           [Pectobacterium atrosepticum SCRI1043]
 gi|49612796|emb|CAG76246.1| putative lipoprotein [Pectobacterium atrosepticum SCRI1043]
          Length = 244

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 99/222 (44%), Gaps = 15/222 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           +S+D   DS        E+Y  A   L++ NF  A          +PF   +++  L   
Sbjct: 23  NSKDAVPDSPP-----SEIYANAQQKLQDGNFKAAITQLEALDNRYPFGPYSQQVQLDLI 77

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYD 151
           +  Y + +   A +  + ++   P   NVDYV Y+ G++   +          +     D
Sbjct: 78  YAYYKSAELPLAQASIDRFLRLNPTHPNVDYVLYMRGLTDMALDDSALQGFFGVDRSDRD 137

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
            +  +   +  S++++ Y NS Y   A   +   + +LA  E+ + +YY KRG YVA + 
Sbjct: 138 PQYARTAFRDFSKLIQGYPNSQYATDANKRLVYLKERLAKYELSVAQYYTKRGAYVAVVN 197

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           R + +L +Y D +  + A+  +  AY  L L  +A +V  +I
Sbjct: 198 RVEQMLRDYPDTQATKNALPLMESAYRELQLAAQADKVAKVI 239


>gi|227329205|ref|ZP_03833229.1| outer membrane protein assembly complex subunit YfiO
           [Pectobacterium carotovorum subsp. carotovorum WPP14]
          Length = 244

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 99/222 (44%), Gaps = 15/222 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           +S+D   DS        E+Y  A   L++ NF  A          +PF   +++  L   
Sbjct: 23  NSKDAVPDSPP-----SEIYANAQQKLQDGNFKAAITQLEALDNRYPFGPYSQQVQLDLI 77

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYD 151
           +  Y + +   A +  + ++   P   NVDYV Y+ G++   +          +     D
Sbjct: 78  YAYYKSAELPLAQASIDRFLRLNPTHPNVDYVLYMRGLTDMALDDSALQGFFGVDRSDRD 137

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
            +  +   +  S++++ Y NS Y   A   +   + +LA  E+ + +YY KRG YVA + 
Sbjct: 138 PQYARTAFRDFSKLIQGYPNSQYATDANKRLVYLKERLAKYELSVAQYYTKRGAYVAVVN 197

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           R + +L +Y D +  + A+  +  AY  L L  +A +V  +I
Sbjct: 198 RVEQMLRDYPDTQATKTALPLMENAYRELQLAAQADKVAKVI 239


>gi|323526135|ref|YP_004228288.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp.
           CCGE1001]
 gi|323383137|gb|ADX55228.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp.
           CCGE1001]
          Length = 286

 Score = 69.3 bits (168), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 17/210 (8%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             ++Y +A   L   +F K  +YF       PF   A+++ +  A+  +   +   A   
Sbjct: 55  NNKLYTEANDALNGGDFGKCAKYFEMLEGRDPFGHFAQQAQINVAYCNWKDNETAAADQA 114

Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164
            + +I  +P+  ++ Y YYL GM +             Q + +   D ++ +        
Sbjct: 115 IDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSE--RDPKSLRESYDAFKV 172

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V++Y NS Y   A   +    N LA+ EV    YY +RG YVAAI R QL L  Y +A 
Sbjct: 173 VVDKYPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLALKEYKNAP 232

Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251
             E+A+  ++ +Y  L    L D+ + V++
Sbjct: 233 AIEDALHIMMLSYQKLNQPQLADDTKRVLA 262


>gi|251793937|ref|YP_003008669.1| lipoprotein [Aggregatibacter aphrophilus NJ8700]
 gi|247535336|gb|ACS98582.1| lipoprotein [Aggregatibacter aphrophilus NJ8700]
          Length = 264

 Score = 69.3 bits (168), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 109/246 (44%), Gaps = 20/246 (8%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           +L  FAL    ++AV    G    S +DV      +   ++ +Y     +L+E ++S+A 
Sbjct: 3   KLKSFALLTAMALAVTACSG----SKQDV------EQAPEQTLYSIGQNYLQEGDYSQAI 52

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
            Y    +  FP +  + +  L   +  Y +  Y +     + +I ++P S ++DY  Y+ 
Sbjct: 53  RYLTAVNNRFPGSSYSEQVQLNLIYAYYKSQDYTETLVTVDRFIQRFPNSNHLDYALYMA 112

Query: 138 GMSYAQMIRDVPYD----QRAT------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           G++ + +  +   D     RAT      K        +V+ + NSPY   A   +   + 
Sbjct: 113 GLTNSALGDNFFQDFFGVDRATRENTSIKTAFANFQTLVQHFPNSPYTPDALARMAYIKA 172

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
            LA  E++I ++Y KR  YVA   R   +L  Y D +   +A+  + E+Y  + L   A 
Sbjct: 173 SLARHELDIAKFYFKRDAYVATANRVVSMLKLYPDTQATLDALPLMKESYERMNLKQLAD 232

Query: 248 EVVSLI 253
           +   +I
Sbjct: 233 QTARII 238


>gi|115377512|ref|ZP_01464712.1| NrfG protein, putative [Stigmatella aurantiaca DW4/3-1]
 gi|310820081|ref|YP_003952439.1| competence lipoprotein ComL [Stigmatella aurantiaca DW4/3-1]
 gi|115365452|gb|EAU64487.1| NrfG protein, putative [Stigmatella aurantiaca DW4/3-1]
 gi|309393153|gb|ADO70612.1| competence lipoprotein ComL [Stigmatella aurantiaca DW4/3-1]
          Length = 258

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 14/202 (6%)

Query: 68  LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
           L+ +++ KA +YF      FP+   ++ + L  A V +   ++ +A      +I  YP  
Sbjct: 46  LEGRDYFKAEKYFEFVKTKFPYLEASKTAELRLADVDFVQDRFPEAREKYNAFIKAYPTH 105

Query: 128 KNVDYVYYLVGMSYAQMIRDVPYD-----------QRATKLMLQYMSRIVERYTNSPYVK 176
             VDY  Y V +S+   + D+P D           Q   +  L+ ++  + +Y +S Y  
Sbjct: 106 PQVDYAAYQVALSH---VEDMPSDFFLLPPSEEKDQTEVQSALRALNDFLRQYPDSQYTP 162

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
            AR      + +LA  E+ +  +Y KR  + A   R + +L+ Y   ++ E A+  L EA
Sbjct: 163 QARVQADDAKRRLAEHELYVAAFYRKRERWRAVAQRLEGMLSRYPGTKYEESALFSLHEA 222

Query: 237 YVALALMDEAREVVSLIQERYP 258
           YV L     A+E +  + +R P
Sbjct: 223 YVKLKEPTRAQETLRQVIQRLP 244


>gi|256828931|ref|YP_003157659.1| outer membrane assembly lipoprotein YfiO [Desulfomicrobium
           baculatum DSM 4028]
 gi|256578107|gb|ACU89243.1| outer membrane assembly lipoprotein YfiO [Desulfomicrobium
           baculatum DSM 4028]
          Length = 237

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 88/169 (52%), Gaps = 4/169 (2%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +E++E A  F++++ +++A +   + +  +PF+  A ++ LM A       KY +A    
Sbjct: 33  QELFENARGFMQDKEYAEAADSLTKLNDRYPFSPYATEARLMLADAYALDSKYLEAVDAY 92

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIR--DVPYDQRATKLMLQYMSRIVERYTNSPYV 175
           EE++  +P  +++DYV + +G++     R  D+P+ Q    +  +   R+V  Y  S Y 
Sbjct: 93  EEFLNMHPRHESIDYVLFQIGVNKYNSHRSIDLPHTQLGEAV--ESFRRLVSGYPKSIYR 150

Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           + A  Y+   R  +A  E+ +  +Y K G Y AA  R+  ++ N+ + E
Sbjct: 151 EQALDYIVKCRKLMAEHEMFVADFYFKSGSYNAAWTRYVYIIDNFPELE 199


>gi|323491102|ref|ZP_08096292.1| putative lipoprotein [Vibrio brasiliensis LMG 20546]
 gi|323314649|gb|EGA67723.1| putative lipoprotein [Vibrio brasiliensis LMG 20546]
          Length = 241

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 110/245 (44%), Gaps = 18/245 (7%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
           T+   +A+  LVG    SS +V    V DV    E+Y +A + L+  N+  A +      
Sbjct: 5   TLSGLLALSVLVGC--SSSEEV----VPDVP-PSELYSEAQVSLQSGNWLTAIDKLEALD 57

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
             +PF   + +  L   +  Y         +  E +    P  + +D+V Y+ G+++   
Sbjct: 58  SRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIERFTRLNPTHEKLDWVLYMRGLTHMAQ 117

Query: 145 IRDVPYDQRAT----------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
            R+  +D   T          K       +++ERY +SPY + ++  +   +N+LA  ++
Sbjct: 118 DRNFMHDLLNTDRSDRDPEPVKKAFADFKKLLERYPDSPYAEDSQKRMYALKNRLAKYDL 177

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
               +YL+R  ++AAI R Q +   Y D E A +++   +EAY  L L D  +    +I 
Sbjct: 178 ATADFYLRREAWIAAINRTQELQKTYPDTEAARQSLEIQLEAYKQLGLEDAVQRTQKMI- 236

Query: 255 ERYPQ 259
           E  PQ
Sbjct: 237 ELNPQ 241


>gi|126666671|ref|ZP_01737648.1| DNA uptake lipoprotein [Marinobacter sp. ELB17]
 gi|126628716|gb|EAZ99336.1| DNA uptake lipoprotein [Marinobacter sp. ELB17]
          Length = 265

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 99/209 (47%), Gaps = 10/209 (4%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YE A   +   NF++A    +     +PF   A ++ L   F +Y     + A +  + +
Sbjct: 23  YENARSAMNSGNFNEAETNLDALETYYPFGRYAEQAQLDLIFARYQNLDLEGARAAADRF 82

Query: 121 ITQYPESKNVDYVYYLVGM-SYAQMIR------DVPYDQRATKLMLQYM---SRIVERYT 170
           +   P+S++ DY  ++ G+ SY   I        +  + RA    LQ     S ++ RY 
Sbjct: 83  LRLNPQSEHGDYALFMRGLASYNLDIGLAARYFPIEANARAPGEQLQAFRDFSELLNRYP 142

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
           +S Y   AR  +   RN++A  E+   RYY+ R  Y+AA  R + V+ NY  +   EEA+
Sbjct: 143 DSLYAADARQRMIAVRNRMAELELHAARYYITREAYIAANNRARYVVENYPSSPVVEEAI 202

Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQ 259
             L E +  L +   +++ ++L++  +P 
Sbjct: 203 IILAETFRFLDIKKGSQDAIALLRTNFPD 231


>gi|296157779|ref|ZP_06840613.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp. Ch1-1]
 gi|295892025|gb|EFG71809.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp. Ch1-1]
          Length = 286

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 17/210 (8%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             ++Y +A   L   +F K  +YF       PF   A+++ +  A+  +   +   A   
Sbjct: 55  NNKLYTEANDALTGGDFGKCAKYFEMLEGRDPFGHFAQQAQINVAYCNWKDNENAAADQA 114

Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164
            + +I  +P+  ++ Y YYL GM +             Q + +   D ++ +        
Sbjct: 115 IDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSE--RDPKSLRESYDAFKI 172

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V++Y NS Y   A   +    N LA+ EV    YY +RG YVAAI R QL L  Y +A 
Sbjct: 173 VVDKYPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLALTQYKNAP 232

Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251
             E+A+  ++ +Y  L    L D+ + V++
Sbjct: 233 AIEDALHIMMLSYQRLNQPQLADDTKRVLA 262


>gi|118602522|ref|YP_903737.1| putative transmembrane protein [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|118567461|gb|ABL02266.1| putative transmembrane protein [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 253

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 18/248 (7%)

Query: 22  FALTIFFSIAV--CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           F +  F ++ +  CF   W+ ++ R+    S+T     ++ + +A       +  KA E 
Sbjct: 5   FIILPFLTLLLNGCF---WQEEAKRE----SITKGWLPKKFFAQAKEEASSGSTDKAIEI 57

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
           F Q    +P +  A +S L  A+  Y +  Y QA      YI  YPE  +  Y YYL G 
Sbjct: 58  FEQLQAAYPGSKYALQSKLEIAYALYKSKDYNQAIDRLNSYIKLYPEHFSTPYAYYLRGA 117

Query: 140 SYAQMIRDVPYD------QR---ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
                 R    D      QR   + +    Y   ++ ++  + Y + A+ ++ + RN L+
Sbjct: 118 VSQDKSRSFLDDYLTDSAQRDVNSVRDAFNYYLALIYKFPKTEYAEEAKIHLVILRNILS 177

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
             E+ +  YY KRG  +AAI R + ++  Y +      A+  +   Y A++    A++  
Sbjct: 178 RHELFVAIYYTKRGANIAAINRTKFIIEKYPNTPSVPAALHLMAYNYDAISANILAKDAR 237

Query: 251 SLIQERYP 258
            +++  YP
Sbjct: 238 RVLKNSYP 245


>gi|91783469|ref|YP_558675.1| putative competence lipoprotein, ComL [Burkholderia xenovorans
           LB400]
 gi|91687423|gb|ABE30623.1| Putative competence lipoprotein, ComL [Burkholderia xenovorans
           LB400]
          Length = 286

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 17/210 (8%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             ++Y +A   L   +F K  +YF       PF   A+++ +  A+  +   +   A   
Sbjct: 55  NNKLYTEANDALTGGDFGKCAKYFEMLEGRDPFGHFAQQAQINVAYCNWKDNENAAADQA 114

Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164
            + +I  +P+  ++ Y YYL GM +             Q + +   D ++ +        
Sbjct: 115 IDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSE--RDPKSLRESYDAFKI 172

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V++Y NS Y   A   +    N LA+ EV    YY +RG YVAAI R QL L  Y +A 
Sbjct: 173 VVDKYPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLALTQYKNAP 232

Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251
             E+A+  ++ +Y  L    L D+ + V++
Sbjct: 233 AIEDALHIMMLSYQRLNQPQLADDTKRVLA 262


>gi|229525358|ref|ZP_04414763.1| hypothetical protein VCA_002980 [Vibrio cholerae bv. albensis
           VL426]
 gi|229338939|gb|EEO03956.1| hypothetical protein VCA_002980 [Vibrio cholerae bv. albensis
           VL426]
          Length = 253

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 11/216 (5%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D V DV    ++Y +A   L+   +  A E        +PF   + +  L   +  Y   
Sbjct: 35  DVVPDVP-PSQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKND 93

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLM 158
                 +  E +    P  + +D+V Y+ G+++    R+  +D              K  
Sbjct: 94  DLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRRDRDPEPVKAA 153

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
                ++++RY NSPY + A+  +   +N+LA  ++    +YL+R  ++AAI R Q +  
Sbjct: 154 FADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLRREAWIAAINRTQELQK 213

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
            Y D E A +++A  +EAY  L L D       L+Q
Sbjct: 214 TYPDTEAARKSLAIQLEAYQQLGLTDAIERTKQLMQ 249


>gi|307729590|ref|YP_003906814.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp.
           CCGE1003]
 gi|307584125|gb|ADN57523.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp.
           CCGE1003]
          Length = 286

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 17/210 (8%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             ++Y +A   L   ++ K  +YF       PF   A+++ +  A+  +   +   A   
Sbjct: 55  NNKLYTEANDALNGGDYGKCAKYFEMLEGRDPFGHFAQQAQINVAYCNWKDNETAAADQA 114

Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164
            + +I  +P+  ++ Y YYL GM +             Q + +   D ++ +        
Sbjct: 115 IDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSE--RDPKSLRESYDAFKV 172

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V+RY NS Y   A   +    N LA+ EV    YY +RG YVAAI R QL L  Y +A 
Sbjct: 173 VVDRYPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLALKEYKNAP 232

Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251
             E+A+  ++ +Y  L    L D+ + V++
Sbjct: 233 AIEDALHIMMLSYEKLNQPQLADDTKRVLA 262


>gi|91227646|ref|ZP_01261923.1| hypothetical protein V12G01_13214 [Vibrio alginolyticus 12G01]
 gi|91188425|gb|EAS74719.1| hypothetical protein V12G01_13214 [Vibrio alginolyticus 12G01]
          Length = 242

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 90/206 (43%), Gaps = 10/206 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y  A + L+  N+  A E        +PF   + +  L   +  Y         +   
Sbjct: 32  ELYADAQISLQSGNWLSAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIS 91

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVER 168
            ++   P  + +D+V Y+ G+S+    R+  +D              K       ++++R
Sbjct: 92  RFMRLNPTHEKMDWVLYMRGLSHMAQDRNFMHDLFSVDRSDRDPEPVKKAFDDFKKLLQR 151

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NSPY + ++  +   +N+LA  ++    +YL+R  +VAAI R Q +   Y D E A +
Sbjct: 152 YPNSPYAEDSQKRMVALKNRLANYDLATADFYLRREAWVAAINRSQELQKAYPDTEAARK 211

Query: 229 AMARLVEAYVALALMDEAREVVSLIQ 254
           ++   +EAY  L L D       LI+
Sbjct: 212 SLTIQLEAYKQLGLEDAVARTEKLIE 237


>gi|157369128|ref|YP_001477117.1| outer membrane protein assembly complex subunit YfiO [Serratia
           proteamaculans 568]
 gi|157320892|gb|ABV39989.1| putative lipoprotein [Serratia proteamaculans 568]
          Length = 243

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 97/215 (45%), Gaps = 11/215 (5%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D+V D     E+Y  A   L++ NF  A          +PF   +++  L   +  Y + 
Sbjct: 25  DAVPD-NPPSEIYATAQQKLQDGNFKGAITQLEALDNRYPFGPYSQQVQLDLIYAYYKSA 83

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLM 158
               A +  + ++   P   N+DYV Y+ G++   +          +     D +  +  
Sbjct: 84  DLPLAQASIDRFMRLNPTHPNIDYVMYMRGLTDMALDDSALQGFFGVDRSDRDPQHARAA 143

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
            +  S+++++Y NS YV  A   +   +++LA  E+ +  YY KRG YVA + R + +L 
Sbjct: 144 FRDFSQLIQQYPNSQYVTDANKRLVYLKDRLAKYELSVVEYYTKRGAYVAVVNRAEQMLR 203

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            Y D +   +A+  +  AY  L L  +A +V  +I
Sbjct: 204 EYPDTKATRDALPLMENAYKQLQLNGQADKVAKVI 238


>gi|294788952|ref|ZP_06754192.1| competence lipoprotein ComL [Simonsiella muelleri ATCC 29453]
 gi|294483054|gb|EFG30741.1| competence lipoprotein ComL [Simonsiella muelleri ATCC 29453]
          Length = 268

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 106/245 (43%), Gaps = 10/245 (4%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           +F  + V  L G     S+      +T      ++Y +A   L   N+++A + +     
Sbjct: 5   LFSVVVVAALSGCAANQSKISKDAQITQNWTADQLYSEARNELNSGNYTRATKLYELLRA 64

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM------ 139
             P      +SLL +A+ QY   + ++A      +   YP S+++DY  YL G+      
Sbjct: 65  RQPEGRYIEQSLLDTAYAQYKNEEPEKALIALARFKQNYPASRDMDYALYLKGLVLFAEE 124

Query: 140 -SYAQMIRDVPY---DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
            S+ + +    +   D  + +        +V++Y  S Y   A   +    + L   E+ 
Sbjct: 125 QSFLRKLASQDWADRDPASNRKAYYAFEELVKKYPTSKYAADATKRMAKLVDALGGHEIA 184

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           I RYY KRG YVAA  R Q V+ N+ +    EE++A ++  Y  +     A +V  ++Q 
Sbjct: 185 IARYYAKRGAYVAANNRAQRVIENFQNTRFVEESLAIMIFTYKKMDKPRLAEDVRQVLQH 244

Query: 256 RYPQG 260
            +P  
Sbjct: 245 NFPNS 249


>gi|238027089|ref|YP_002911320.1| putative competence lipoprotein ComL [Burkholderia glumae BGR1]
 gi|237876283|gb|ACR28616.1| Putative competence lipoprotein ComL [Burkholderia glumae BGR1]
          Length = 281

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 17/210 (8%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             ++Y +A   L  +++ K  +YF       PF   A+++ +  A+  +   +   A   
Sbjct: 49  NNKLYSEAQDALTGRDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWKDNELTAADQA 108

Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164
            + +I  +P+  ++ Y YYL GM +             Q + +   D +A +        
Sbjct: 109 VDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSE--RDPQALRESYDAFKI 166

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V+RY  S Y   A   +    N LA+ EV    YY +RG YVAAI R QL +  Y +A 
Sbjct: 167 VVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAITQYKNAP 226

Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251
             E+A+  ++ +Y  L    L D+ + V++
Sbjct: 227 AIEDALHIMMLSYTRLNQPQLADDTKRVLA 256


>gi|295676472|ref|YP_003604996.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp.
           CCGE1002]
 gi|295436315|gb|ADG15485.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp.
           CCGE1002]
          Length = 286

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 17/210 (8%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             ++Y +A   L   ++ K  +YF       PF   A+++ +  A+  +   +   A   
Sbjct: 55  NNKLYTEANDALTGGDWGKCAKYFELLEGRDPFGHFAQQAQINVAYCNWKDNENAAADQA 114

Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164
            + +I  +P+  ++ Y YYL GM +             Q + +   D ++ +        
Sbjct: 115 IDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSE--RDPKSLRESYDAFKV 172

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V+R+ NS Y   A   +    N LA+ EV    YY +RG YVAAI R QL L  Y +A 
Sbjct: 173 VVDRFPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLALREYKNAP 232

Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251
             E+A+  ++ +Y  L    L D+ R V++
Sbjct: 233 AIEDALHIMILSYEKLNNQQLADDTRRVLA 262


>gi|322831461|ref|YP_004211488.1| outer membrane assembly lipoprotein YfiO [Rahnella sp. Y9602]
 gi|321166662|gb|ADW72361.1| outer membrane assembly lipoprotein YfiO [Rahnella sp. Y9602]
          Length = 244

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 102/229 (44%), Gaps = 17/229 (7%)

Query: 35  LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94
           LVG    SS++   D+  +V     +Y  A   L++ NF  A          +PF   ++
Sbjct: 17  LVGCS--SSKETVPDNPPNV-----LYATAQQKLQDGNFKGAIAQLEALDNRYPFGPYSQ 69

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM---------- 144
           +  L   +  Y +     A +  + ++   P   N+DYV Y+ G++   +          
Sbjct: 70  QVQLDLIYAYYKSADLPMAQASIDRFMRLNPTHPNIDYVMYMRGLTDMALDDSALQGFFG 129

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
           +     D +  +   +  S+++  Y NS Y   A   +   +++LA  E+ + +YY KRG
Sbjct: 130 VDRSDRDPQHARAAFRDFSQLIHTYPNSQYATDATKRLVFLKDRLAKYELSVVQYYTKRG 189

Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            YVA + R + +L +Y D +   +A+  +  AY  L L  +A +V  +I
Sbjct: 190 AYVAVVNRVEQMLKDYPDTKATHDALPLMENAYRELQLNTQADKVAKII 238


>gi|242279291|ref|YP_002991420.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio salexigens
           DSM 2638]
 gi|242122185|gb|ACS79881.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio salexigens
           DSM 2638]
          Length = 243

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 92/197 (46%), Gaps = 9/197 (4%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           +F S++ C ++ +        +L    D    +E++E  V  +K++ +  A EYF++   
Sbjct: 14  LFISLSGCGVIDY-------YFLPKPEDT--AQELFEAGVQAMKDKEYFDATEYFSKLKD 64

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
            +PF+    K+ +      +   KY  A+   +E+   +P +  + YV Y +G+S   + 
Sbjct: 65  RYPFSPYTVKAEISLGDAYFLDKKYFDASEAYKEFAALHPGNDEIPYVLYQIGLSNFNLF 124

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
             +   Q      L+Y  R+ E Y  + Y K A+ Y+   R  LA  E+ I  ++ +  +
Sbjct: 125 SSIDRPQSNITEALEYFYRVEEAYPETQYAKSAKEYIVKCRRALADHELYIADFFWRSSK 184

Query: 206 YVAAIPRFQLVLANYSD 222
           + +A  R+  V+ N+ D
Sbjct: 185 FGSAWKRYAYVVRNFKD 201


>gi|330817149|ref|YP_004360854.1| Putative competence lipoprotein ComL [Burkholderia gladioli BSR3]
 gi|327369542|gb|AEA60898.1| Putative competence lipoprotein ComL [Burkholderia gladioli BSR3]
          Length = 281

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 17/210 (8%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             ++Y +A   L   ++ K  +YF       PF   A+++ +  A+  +   +   A   
Sbjct: 49  NNKLYSEAQDALNGSDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWKDNEASAADQA 108

Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164
            + +I  +P+  ++ Y YYL GM +             Q + +   D +A +        
Sbjct: 109 VDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSE--RDPQALRESYDAFKI 166

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V+RY  S Y   A   +    N LA+ EV    YY +RG YVAAI R QL +  Y +A 
Sbjct: 167 VVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAITQYKNAP 226

Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251
             E+A+  +V +Y  L    L D+ + V++
Sbjct: 227 AIEDALHIMVLSYGRLNQPQLADDTKRVLA 256


>gi|317049250|ref|YP_004116898.1| outer membrane assembly lipoprotein YfiO [Pantoea sp. At-9b]
 gi|316950867|gb|ADU70342.1| outer membrane assembly lipoprotein YfiO [Pantoea sp. At-9b]
          Length = 243

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 98/229 (42%), Gaps = 17/229 (7%)

Query: 35  LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94
           LVG     S+D   DS        E+Y  A   L++ NF  A +        +PF   ++
Sbjct: 17  LVGCS--GSKDTVPDSPP-----SEIYATAQQKLQDGNFKAAIKQLEALDNRYPFGPYSQ 69

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM---------- 144
           +  L   +  Y       A +    ++   P   N+DYV Y+ G++   +          
Sbjct: 70  QVQLDLIYAYYKNADLPLAQAAIARFMRLNPTHPNIDYVIYMKGLTDMALDDSALQGFFG 129

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
           I     D    +   +  S+++  Y NS Y   A+  +   + +LA  E+ + ++Y KRG
Sbjct: 130 IDRSDRDPTHARDAFRDFSQLLRGYPNSQYAADAQKRLVFLKERLAKYELSVAQFYTKRG 189

Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            YVA + R + ++ +Y D +   EA+  +  AY  L L  EA +V  +I
Sbjct: 190 AYVAVVNRVEGMMKDYPDTQATHEALPLMENAYRQLQLTAEADKVAKII 238


>gi|320539056|ref|ZP_08038730.1| putative outer membrane protein assembly lipoprotein [Serratia
           symbiotica str. Tucson]
 gi|320030896|gb|EFW12901.1| putative outer membrane protein assembly lipoprotein [Serratia
           symbiotica str. Tucson]
          Length = 241

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 102/237 (43%), Gaps = 17/237 (7%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
             ++A   LV     +S+D   D+        E+Y  A   +++ NF  A          
Sbjct: 7   LVAVATLSLVLAGCSTSKDAVPDNPPS-----EIYATAQQKMQDGNFKGAITQLEALDNR 61

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
           +PF   +++  L   +  Y +     A +  + +I   P   N+DYV Y+ G+  A M  
Sbjct: 62  YPFGPYSQQVQLYLIYAYYKSADLPLAQASIDRFIRLNPTHPNIDYVMYMRGL--ADMAL 119

Query: 147 DVPYDQ------RATKLMLQ----YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
           D    Q      R+ +  L     +     ER  NS YV  A   +   +++LA  E+ +
Sbjct: 120 DDSTLQGFFGIDRSDRDPLHARAAFRDFSQERSPNSQYVTDANKRLVYLKDRLAKYELSV 179

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
             YY KRG YVAAI R + +L  Y D +   +A+  +  AY  L L  EA +V  +I
Sbjct: 180 VEYYTKRGAYVAAINRVEQMLREYPDTKATRDALPLMERAYKRLQLNSEAEKVAKVI 236


>gi|53723512|ref|YP_102985.1| competence lipoprotein ComL [Burkholderia mallei ATCC 23344]
 gi|52426935|gb|AAU47528.1| competence lipoprotein ComL [Burkholderia mallei ATCC 23344]
          Length = 280

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 17/210 (8%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             ++Y +A   L   ++ K  +YF       PF   A+++ +  A+  +   +   A   
Sbjct: 49  NNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWKDNETATADQA 108

Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164
            + +I  +P+  +V Y YYL GM +             Q + +   D +A +        
Sbjct: 109 VDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQDMSER--DPQALRESYDAFKA 166

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V+RY  S Y   A   +    N LA+ EV    YY +RG YVAAI R QL +  Y +A 
Sbjct: 167 VVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYKNAP 226

Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251
             E+A+  ++ +Y  L    L D+ + V++
Sbjct: 227 AIEDALHIMMLSYAKLNQPQLADDTKRVLA 256


>gi|121599824|ref|YP_993133.1| competence lipoprotein ComL [Burkholderia mallei SAVP1]
 gi|124384405|ref|YP_001026091.1| competence lipoprotein ComL [Burkholderia mallei NCTC 10229]
 gi|126449169|ref|YP_001080639.1| competence lipoprotein ComL [Burkholderia mallei NCTC 10247]
 gi|167002221|ref|ZP_02268011.1| competence lipoprotein ComL [Burkholderia mallei PRL-20]
 gi|238562639|ref|ZP_00440110.2| competence lipoprotein ComL [Burkholderia mallei GB8 horse 4]
 gi|254178609|ref|ZP_04885264.1| competence lipoprotein ComL [Burkholderia mallei ATCC 10399]
 gi|254199930|ref|ZP_04906296.1| competence lipoprotein ComL [Burkholderia mallei FMH]
 gi|254206263|ref|ZP_04912615.1| competence lipoprotein ComL [Burkholderia mallei JHU]
 gi|254358322|ref|ZP_04974595.1| competence lipoprotein ComL [Burkholderia mallei 2002721280]
 gi|121228634|gb|ABM51152.1| competence lipoprotein ComL [Burkholderia mallei SAVP1]
 gi|124292425|gb|ABN01694.1| competence lipoprotein ComL [Burkholderia mallei NCTC 10229]
 gi|126242039|gb|ABO05132.1| competence lipoprotein ComL [Burkholderia mallei NCTC 10247]
 gi|147749526|gb|EDK56600.1| competence lipoprotein ComL [Burkholderia mallei FMH]
 gi|147753706|gb|EDK60771.1| competence lipoprotein ComL [Burkholderia mallei JHU]
 gi|148027449|gb|EDK85470.1| competence lipoprotein ComL [Burkholderia mallei 2002721280]
 gi|160699648|gb|EDP89618.1| competence lipoprotein ComL [Burkholderia mallei ATCC 10399]
 gi|238522243|gb|EEP85689.1| competence lipoprotein ComL [Burkholderia mallei GB8 horse 4]
 gi|243062039|gb|EES44225.1| competence lipoprotein ComL [Burkholderia mallei PRL-20]
          Length = 274

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 17/210 (8%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             ++Y +A   L   ++ K  +YF       PF   A+++ +  A+  +   +   A   
Sbjct: 43  NNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWKDNETATADQA 102

Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164
            + +I  +P+  +V Y YYL GM +             Q + +   D +A +        
Sbjct: 103 VDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQDMSER--DPQALRESYDAFKA 160

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V+RY  S Y   A   +    N LA+ EV    YY +RG YVAAI R QL +  Y +A 
Sbjct: 161 VVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYKNAP 220

Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251
             E+A+  ++ +Y  L    L D+ + V++
Sbjct: 221 AIEDALHIMMLSYAKLNQPQLADDTKRVLA 250


>gi|329297085|ref|ZP_08254421.1| outer membrane biogenesis protein BamD [Plautia stali symbiont]
          Length = 246

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 103/241 (42%), Gaps = 20/241 (8%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           A T+  S+A   LVG    S      D V D     E+Y  A   L++ NF  A +    
Sbjct: 10  AATLSLSLA---LVGCSGSS------DPVPDSP-PSEIYATAQQKLQDGNFKAAIKQLEA 59

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
               +PF   +++  L   +  Y       A +    ++   P   N+DYV Y+ G++  
Sbjct: 60  LDNRYPFGPYSQQVQLDLIYAYYKNTDLPLAQAAISRFMRLNPTHPNIDYVIYMKGLTDM 119

Query: 143 QM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
            +          I     D    +   +  S+++  Y N  Y   A+  +T  ++ LA  
Sbjct: 120 ALDDSALQDFFGIDRSDRDPTHARDAFRDFSQLLRGYPNCQYAADAQKRLTFLKDSLAKY 179

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           E+ + ++Y KRG YVA + R + ++ +Y D +   +A+  +  AY  L L  EA +V  +
Sbjct: 180 ELSVAQFYTKRGAYVAVVNRVEGMMRDYPDTQATRDALPLMENAYRQLQLTTEADKVAKI 239

Query: 253 I 253
           I
Sbjct: 240 I 240


>gi|126438751|ref|YP_001059204.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           668]
 gi|126218244|gb|ABN81750.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           668]
          Length = 274

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 17/210 (8%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             ++Y +A   L   ++ K  +YF       PF   A+++ +  A+  +   +   A   
Sbjct: 43  NNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWKDNETAAADQA 102

Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164
            + +I  +P+  +V Y YYL GM +             Q + +   D +A +        
Sbjct: 103 VDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQDMSER--DPQALRESYDAFKA 160

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V+RY  S Y   A   +    N LA+ EV    YY +RG YVAAI R QL +  Y +A 
Sbjct: 161 VVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYKNAP 220

Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251
             E+A+  ++ +Y  L    L D+ + V++
Sbjct: 221 AIEDALHIMMLSYAKLNQPQLADDTKRVLA 250


>gi|88800778|ref|ZP_01116335.1| competence lipoprotein ComL, putative [Reinekea sp. MED297]
 gi|88776484|gb|EAR07702.1| competence lipoprotein ComL, putative [Reinekea sp. MED297]
          Length = 277

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 95/213 (44%), Gaps = 18/213 (8%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YE A  +L+++N+S A E        FPF   A  S L   +  Y    +  A    + +
Sbjct: 39  YETAQEYLEKRNYSMAVERLTALRDRFPFGRYADASALDLMYAYYGMNDFANALVEADRF 98

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMI--------------RDVPYDQRATKLMLQYMSRIV 166
                E  +VDY +++  MSY ++               R     Q+A + + Q+ +R  
Sbjct: 99  TRLNSEHPDVDYAWFVRSMSYYELFLTNRGILGKADPAKRSAEQGQKAFRALSQFTAR-- 156

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
             Y +S Y   A   + + ++ LA  E+ +  YY++R  ++AA  R + V+ +Y      
Sbjct: 157 --YPDSRYRPEALDAMVILKDALARHELVVADYYIRREAWIAAAERAKTVVEHYPGVTAV 214

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            +A+  L+EAY AL +  +   V+S +   YP 
Sbjct: 215 GDALVVLIEAYDALDMPTDRSLVLSRLTNDYPD 247


>gi|254189037|ref|ZP_04895548.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           Pasteur 52237]
 gi|157936716|gb|EDO92386.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           Pasteur 52237]
          Length = 274

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 17/210 (8%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             ++Y +A   L   ++ K  +YF       PF   A+++ +  A+  +   +   A   
Sbjct: 43  NNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWKDNETAAADQA 102

Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164
            + +I  +P+  +V Y YYL GM +             Q + +   D +A +        
Sbjct: 103 VDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQDMSER--DPQALRESYDAFKA 160

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V+RY  S Y   A   +    N LA+ EV    YY +RG YVAAI R QL +  Y +A 
Sbjct: 161 VVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYKNAP 220

Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251
             E+A+  ++ +Y  L    L D+ + V++
Sbjct: 221 AIEDALHIMMLSYAKLNQPQLADDTKRVLA 250


>gi|124267193|ref|YP_001021197.1| putative transmembrane protein [Methylibium petroleiphilum PM1]
 gi|124259968|gb|ABM94962.1| putative transmembrane protein [Methylibium petroleiphilum PM1]
          Length = 274

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 87/177 (49%), Gaps = 13/177 (7%)

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQMI--------RDVP-Y 150
           A+  Y   +  QA S  E +I  +P S  +DY YYL G+ ++ + +        +D+   
Sbjct: 87  AYAYYKTNEKAQALSTIERFIKLHPSSPAIDYAYYLQGLINFNENLGLLGGLARQDLSER 146

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
           DQ+A +   Q   ++  ++ NS Y   A+  +    N LA  EV + RYY +RG YVAA 
Sbjct: 147 DQQAARDAYQSFRQLTLQFPNSKYTPDAQLRMNYIVNTLATYEVHVARYYYRRGAYVAAA 206

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
            R Q  +  +  A   EEA+  L  +Y  L L +   +   ++Q  +P+   +RYV+
Sbjct: 207 NRAQQAVQEFQRAPATEEALYILGISYDKLGLTELRDDAQRVLQTNFPE---SRYVK 260


>gi|254179572|ref|ZP_04886171.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           1655]
 gi|184210112|gb|EDU07155.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           1655]
          Length = 274

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 17/210 (8%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             ++Y +A   L   ++ K  +YF       PF   A+++ +  A+  +   +   A   
Sbjct: 43  NNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWKDNETAAADQA 102

Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164
            + +I  +P+  +V Y YYL GM +             Q + +   D +A +        
Sbjct: 103 VDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQDMSER--DPQALRESYDAFKA 160

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V+RY  S Y   A   +    N LA+ EV    YY +RG YVAAI R QL +  Y +A 
Sbjct: 161 VVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYKNAP 220

Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251
             E+A+  ++ +Y  L    L D+ + V++
Sbjct: 221 AIEDALHIMMLSYAKLNQPQLADDTKRVLA 250


>gi|183597511|ref|ZP_02959004.1| hypothetical protein PROSTU_00784 [Providencia stuartii ATCC 25827]
 gi|188023156|gb|EDU61196.1| hypothetical protein PROSTU_00784 [Providencia stuartii ATCC 25827]
          Length = 243

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 12/206 (5%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y      L++ N+  A +        +PF   A++  L   +  Y + +   A +  +
Sbjct: 34  EMYSIGQQKLQDGNYKAAIKQLEALDNRYPFGPYAQQVQLDLIYAYYKSAELPMAIAAID 93

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDV-----------PYDQRATKLMLQYMSRIVE 167
            ++   P   N+DYV Y+ G++ A  + D              D +  ++  +  S++V 
Sbjct: 94  RFMRLNPTHPNIDYVLYMRGLT-AMALDDSLLQGFFGVDRSDRDPQHARVAFKDFSQLVR 152

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y NS Y   A   +   +++LA  ++ +  YY KRG YVA + R Q +L +Y D E   
Sbjct: 153 YYPNSLYANDASKRLVYLKDRLARFDLSVVEYYNKRGAYVAVVNRVQQMLRDYPDTEATR 212

Query: 228 EAMARLVEAYVALALMDEAREVVSLI 253
            A+  +  AY  + L +EA +V +LI
Sbjct: 213 NALKYMEIAYKQMGLDEEANKVANLI 238


>gi|262170004|ref|ZP_06037694.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio cholerae RC27]
 gi|262021738|gb|EEY40449.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio cholerae RC27]
          Length = 241

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 11/216 (5%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D V DV    ++Y +A   L+   +  A E        +PF   + +  L   +  Y   
Sbjct: 23  DVVPDVP-PSQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKND 81

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLM 158
                 +  E +    P  + +D+V Y+ G+++    R+  +D              K  
Sbjct: 82  DLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRRDRDPEPVKAA 141

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
                ++++RY NSPY + A+  +   +N+LA  ++    +YL+R  ++AAI R Q +  
Sbjct: 142 FADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLRREAWIAAINRTQELQK 201

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
            Y D E A +++   +EAY  L L D       L+Q
Sbjct: 202 TYPDTEAARQSLEIQLEAYQQLGLTDAVERTKQLMQ 237


>gi|28897332|ref|NP_796937.1| hypothetical protein VP0558 [Vibrio parahaemolyticus RIMD 2210633]
 gi|153839764|ref|ZP_01992431.1| lipoprotein, ComL family [Vibrio parahaemolyticus AQ3810]
 gi|260364019|ref|ZP_05776750.1| competence lipoprotein ComL [Vibrio parahaemolyticus K5030]
 gi|260876295|ref|ZP_05888650.1| competence lipoprotein ComL [Vibrio parahaemolyticus AN-5034]
 gi|260895102|ref|ZP_05903598.1| competence lipoprotein ComL [Vibrio parahaemolyticus Peru-466]
 gi|260903278|ref|ZP_05911673.1| competence lipoprotein ComL [Vibrio parahaemolyticus AQ4037]
 gi|28805541|dbj|BAC58821.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149746717|gb|EDM57705.1| lipoprotein, ComL family [Vibrio parahaemolyticus AQ3810]
 gi|308088893|gb|EFO38588.1| competence lipoprotein ComL [Vibrio parahaemolyticus Peru-466]
 gi|308092865|gb|EFO42560.1| competence lipoprotein ComL [Vibrio parahaemolyticus AN-5034]
 gi|308107944|gb|EFO45484.1| competence lipoprotein ComL [Vibrio parahaemolyticus AQ4037]
 gi|308115633|gb|EFO53173.1| competence lipoprotein ComL [Vibrio parahaemolyticus K5030]
 gi|328472094|gb|EGF42971.1| hypothetical protein VP10329_03035 [Vibrio parahaemolyticus 10329]
          Length = 242

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 10/206 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y  A + L+  N+  A E        +PF   + +  L   +  Y         +   
Sbjct: 32  ELYADAQVSLQSGNWLSAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIS 91

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVER 168
            ++   P  + +D+V Y+ G+S+    R+  +D              K       ++++R
Sbjct: 92  RFMRLNPTHEKMDWVLYMRGLSHMAQDRNFMHDLFSIDRSDRDPEPVKKAFDDFKKLLQR 151

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NSPY + A+  +   +N+LA  ++    +YL+R  ++AAI R Q +  ++ D E A +
Sbjct: 152 YPNSPYAEDAQKRMVALKNRLANYDLATADFYLRREAWIAAINRSQELQKSFPDTEAARK 211

Query: 229 AMARLVEAYVALALMDEAREVVSLIQ 254
           ++   +EAY  L L D      +LI+
Sbjct: 212 SLEIQLEAYKQLQLEDAVARTEALIK 237


>gi|167836419|ref|ZP_02463302.1| competence lipoprotein ComL [Burkholderia thailandensis MSMB43]
          Length = 274

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 17/210 (8%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             ++Y +A   L   ++ K  +YF       PF   A+++ +  A+  +   +   A   
Sbjct: 43  NNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWKDNETASADQA 102

Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164
            + +I  +P+  +V Y YYL GM +             Q + +   D +A +        
Sbjct: 103 VDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQDMSER--DPQALRESYDAFKV 160

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V+RY  S Y   A   +    N LA+ EV    YY +RG YVAAI R QL +  Y +A 
Sbjct: 161 VVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYKNAP 220

Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251
             E+A+  +  +Y  L    L D+ + V++
Sbjct: 221 AIEDALHIMTLSYAKLNQPQLADDTKRVLA 250


>gi|147675286|ref|YP_001216200.1| putative lipoprotein [Vibrio cholerae O395]
 gi|146317169|gb|ABQ21708.1| putative lipoprotein [Vibrio cholerae O395]
 gi|227012533|gb|ACP08743.1| conserved hypothetical protein [Vibrio cholerae O395]
          Length = 253

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 11/216 (5%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D V DV    ++Y +A   L+   +  A E        +PF   + +  L   +  Y   
Sbjct: 35  DVVPDVP-PSQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKND 93

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLM 158
                 +  E +    P  + +D+V Y+ G+++    R+  +D              K  
Sbjct: 94  DLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRRDRDPEPVKAA 153

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
                ++++RY NSPY + A+  +   +N+LA  ++    +YL+R  ++AAI R Q +  
Sbjct: 154 FADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLRREAWIAAINRTQELQK 213

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
            Y D E A +++   +EAY  L L D       L+Q
Sbjct: 214 TYPDTEAARQSLEIQLEAYQQLGLTDAVERTKQLMQ 249


>gi|269966584|ref|ZP_06180665.1| putative lipoprotein [Vibrio alginolyticus 40B]
 gi|269828769|gb|EEZ83022.1| putative lipoprotein [Vibrio alginolyticus 40B]
          Length = 242

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 10/206 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y  A + L+  N+  A E        +PF   + +  L   +  Y         +   
Sbjct: 32  ELYADAQISLQSGNWLSAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIS 91

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVER 168
            ++   P  + +D+V Y+ G+S+    R+  +D              K       ++++R
Sbjct: 92  RFMRLNPTHEKMDWVLYMRGLSHMAQDRNFMHDLFSVDRSDRDPEPVKKAFDDFKKLLQR 151

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NSPY + ++  +   +N+LA  ++    +YL+R  +VAAI R Q +   + D E A +
Sbjct: 152 YPNSPYAQDSQKRMVALKNRLANYDLATADFYLRREAWVAAINRSQELQKAFPDTEAARK 211

Query: 229 AMARLVEAYVALALMDEAREVVSLIQ 254
           ++   +EAY  L L D       LI+
Sbjct: 212 SLTIQLEAYKQLGLEDAVARTEKLIE 237


>gi|254230256|ref|ZP_04923647.1| hypothetical protein VEx25_0358 [Vibrio sp. Ex25]
 gi|262395164|ref|YP_003287018.1| putative component of the lipoprotein assembly complex [Vibrio sp.
           Ex25]
 gi|151937236|gb|EDN56103.1| hypothetical protein VEx25_0358 [Vibrio sp. Ex25]
 gi|262338758|gb|ACY52553.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio sp. Ex25]
          Length = 242

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 10/206 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y  A + L+  N+  A E        +PF   + +  L   +  Y         +   
Sbjct: 32  ELYADAQISLQSGNWLSAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIS 91

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVER 168
            ++   P  + +D+V Y+ G+S+    R+  +D              K       ++++R
Sbjct: 92  RFMRLNPTHEKMDWVLYMRGLSHMAQDRNFMHDLFSVDRSDRDPEPVKKAFDDFKKLLQR 151

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NSPY + ++  +   +N+LA  ++    +YL+R  +VAAI R Q +   + D E A +
Sbjct: 152 YPNSPYAEDSQKRMVALKNRLANYDLATADFYLRREAWVAAINRSQELQKAFPDTEAARK 211

Query: 229 AMARLVEAYVALALMDEAREVVSLIQ 254
           ++   +EAY  L L D       LI+
Sbjct: 212 SLTIQLEAYKQLGLEDAVARTEKLIE 237


>gi|119470040|ref|ZP_01612845.1| putative lipoprotein with tetratricopeptide repeats (TPR) domain
           [Alteromonadales bacterium TW-7]
 gi|119446750|gb|EAW28023.1| putative lipoprotein with tetratricopeptide repeats (TPR) domain
           [Alteromonadales bacterium TW-7]
          Length = 254

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 110/237 (46%), Gaps = 12/237 (5%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           ++ K A  I FS++V  L      S+ D         R  + +YE A   L    +++A 
Sbjct: 4   KIGKRAFAIVFSVSVLSLGACS--SAPDQEDIQRVPNRSAQALYEDAKETLDSGLYARAI 61

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           E  +     +PF   +++  +   +  Y +G  +QA +  + +I   P  K++DY+YY+ 
Sbjct: 62  ELLSAIDSRYPFGPFSKQVQMDLVYAHYQSGNTEQALATIDRFIRLNPNHKDLDYMYYMR 121

Query: 138 GMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           G+   +  ++             D   T++    +S +V+R+  S Y   A+  +    N
Sbjct: 122 GLVNIKADKNAFQEYFGIDRADRDANRTRVAFTDLSTLVKRFPQSGYAPEAKRRLVWLLN 181

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
           ++A  E+++  YY +R  Y+AA  R + V+ +YS + +   A+  + ++Y  L L +
Sbjct: 182 RMARYELKVATYYYEREAYLAAANRGKFVVEHYSQSSYLNAALDMMQKSYEKLGLTE 238


>gi|134295825|ref|YP_001119560.1| competence lipoprotein ComL [Burkholderia vietnamiensis G4]
 gi|134138982|gb|ABO54725.1| competence lipoprotein ComL [Burkholderia vietnamiensis G4]
          Length = 274

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 14/214 (6%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             ++Y +A   L   ++ K  +YF       PF   A+++ +  A+  +   +   A   
Sbjct: 43  NNKLYSEAQDALSGGDWGKCAKYFESLQGRDPFGHFAQQAQINVAYCNWKDNEAAAADQA 102

Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164
            + +I  +P+  ++ Y YYL GM +             Q + +   D +A +        
Sbjct: 103 VDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFSGQDMSER--DPQALRESYDAFKV 160

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V+RY  S Y   A   +    N LA+ EV    YY +RG YVAAI R QL + +Y  A 
Sbjct: 161 VVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKDYKGAP 220

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
             E+A+  +V +Y  L     A +   ++   +P
Sbjct: 221 AIEDALHIMVLSYGKLNQPQLAEDTKRVLAGTFP 254


>gi|167581725|ref|ZP_02374599.1| competence lipoprotein ComL [Burkholderia thailandensis TXDOH]
 gi|167619841|ref|ZP_02388472.1| competence lipoprotein ComL [Burkholderia thailandensis Bt4]
 gi|257138983|ref|ZP_05587245.1| competence lipoprotein ComL [Burkholderia thailandensis E264]
          Length = 274

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 17/210 (8%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             ++Y +A   L   ++ K  +YF       PF   A+++ +  A+  +   +   A   
Sbjct: 43  NNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWKDNETAAADQA 102

Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164
            + +I  +P+  +V Y YYL GM +             Q + +   D +A +        
Sbjct: 103 VDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQDMSER--DPQALRESYDAFKV 160

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V+RY  S Y   A   +    N LA+ EV    YY +RG YVAAI R QL +  Y +A 
Sbjct: 161 VVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYKNAP 220

Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251
             E+A+  ++ +Y  L    L D+ + V++
Sbjct: 221 AIEDALHIMMLSYAKLNQPQLADDTKRVLA 250


>gi|134277813|ref|ZP_01764528.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           305]
 gi|226197143|ref|ZP_03792720.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           Pakistan 9]
 gi|237812528|ref|YP_002896979.1| competence lipoprotein ComL [Burkholderia pseudomallei MSHR346]
 gi|254197470|ref|ZP_04903892.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           S13]
 gi|254259639|ref|ZP_04950693.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           1710a]
 gi|134251463|gb|EBA51542.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           305]
 gi|169654211|gb|EDS86904.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           S13]
 gi|225930522|gb|EEH26532.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           Pakistan 9]
 gi|237504631|gb|ACQ96949.1| competence lipoprotein ComL [Burkholderia pseudomallei MSHR346]
 gi|254218328|gb|EET07712.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           1710a]
          Length = 280

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 17/210 (8%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             ++Y +A   L   ++ K  +YF       PF   A+++ +  A+  +   +   A   
Sbjct: 49  NNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWKDNETAAADQA 108

Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164
            + +I  +P+  +V Y YYL GM +             Q + +   D +A +        
Sbjct: 109 VDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQDMSER--DPQALRESYDAFKV 166

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V+RY  S Y   A   +    N LA+ EV    YY +RG YVAAI R QL +  Y +A 
Sbjct: 167 VVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYKNAP 226

Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251
             E+A+  ++ +Y  L    L D+ + V++
Sbjct: 227 AIEDALHIMMLSYAKLNQPQLADDTKRVLA 256


>gi|53719165|ref|YP_108151.1| putative lipoprotein [Burkholderia pseudomallei K96243]
 gi|167815477|ref|ZP_02447157.1| putative lipoprotein [Burkholderia pseudomallei 91]
 gi|167910660|ref|ZP_02497751.1| putative lipoprotein [Burkholderia pseudomallei 112]
 gi|52209579|emb|CAH35532.1| putative lipoprotein [Burkholderia pseudomallei K96243]
          Length = 274

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 17/210 (8%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             ++Y +A   L   ++ K  +YF       PF   A+++ +  A+  +   +   A   
Sbjct: 43  NNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWKDNETAAADQA 102

Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164
            + +I  +P+  +V Y YYL GM +             Q + +   D +A +        
Sbjct: 103 VDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQDMSER--DPQALRESYDAFRA 160

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V+RY  S Y   A   +    N LA+ EV    YY +RG YVAAI R QL +  Y +A 
Sbjct: 161 VVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYKNAP 220

Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251
             E+A+  ++ +Y  L    L D+ + V++
Sbjct: 221 AIEDALHIMMLSYAKLNQPQLADDTKRVLA 250


>gi|292487318|ref|YP_003530190.1| hypothetical protein EAMY_0832 [Erwinia amylovora CFBP1430]
 gi|292900316|ref|YP_003539685.1| lipoprotein [Erwinia amylovora ATCC 49946]
 gi|291200164|emb|CBJ47290.1| putative lipoprotein [Erwinia amylovora ATCC 49946]
 gi|291552737|emb|CBA19782.1| UPF0169 lipoprotein PD_1756 precursor [Erwinia amylovora CFBP1430]
          Length = 243

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/222 (24%), Positives = 92/222 (41%), Gaps = 15/222 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
            SRD   DS        E+Y  A   L++ NF  A          +PF   +++  L   
Sbjct: 22  GSRDGVPDSPPS-----EIYATAQQKLQDGNFKGAITQLEALDNRYPFGPYSQQVQLDLI 76

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYD 151
           +  Y       A +  + ++   P   N+DYV Y+ G++   +          I     D
Sbjct: 77  YAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVIYMRGLTDMALDDSALQGFFGIDRSDRD 136

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
               +   +  S+++  Y NS Y   AR  +   + +LA  E+ +  +Y KRG YVA + 
Sbjct: 137 PTHARDAFKDFSQLLRGYPNSQYATDARKRLVFLKERLAKHELSVTEFYTKRGAYVAVVN 196

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           R + +L +Y D     +A+  +  AY  L L  +A  V  +I
Sbjct: 197 RVEQMLKDYPDTRATRKALPLMENAYRQLQLNAQAERVAKII 238


>gi|115351783|ref|YP_773622.1| competence lipoprotein ComL [Burkholderia ambifaria AMMD]
 gi|170703043|ref|ZP_02893870.1| competence lipoprotein ComL [Burkholderia ambifaria IOP40-10]
 gi|171320447|ref|ZP_02909480.1| competence lipoprotein ComL [Burkholderia ambifaria MEX-5]
 gi|172060754|ref|YP_001808406.1| competence lipoprotein ComL [Burkholderia ambifaria MC40-6]
 gi|115281771|gb|ABI87288.1| competence lipoprotein ComL [Burkholderia ambifaria AMMD]
 gi|170132051|gb|EDT00552.1| competence lipoprotein ComL [Burkholderia ambifaria IOP40-10]
 gi|171094307|gb|EDT39381.1| competence lipoprotein ComL [Burkholderia ambifaria MEX-5]
 gi|171993271|gb|ACB64190.1| competence lipoprotein ComL [Burkholderia ambifaria MC40-6]
          Length = 274

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 14/214 (6%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             ++Y +A   L   ++ K  +YF       PF   A+++ +  A+  +   +   A   
Sbjct: 43  NNKLYSEAQDALSGGDWGKCAKYFESLQGRDPFGHFAQQAQINVAYCNWKDNEAAAADQA 102

Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164
            + +I  +P+  ++ Y YYL GM +             Q + +   D +A +        
Sbjct: 103 VDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFSGQDMSER--DPQALRESYDAFKV 160

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V+RY  S Y   A   +    N LA+ EV    YY +RG YVAAI R QL + +Y  A 
Sbjct: 161 VVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKDYKGAP 220

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
             E+A+  ++ +Y  L     A +   ++   +P
Sbjct: 221 AIEDALHIMILSYGKLNQPQLAEDTKRVLAGTFP 254


>gi|325528652|gb|EGD05738.1| competence lipoprotein ComL [Burkholderia sp. TJI49]
          Length = 274

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 14/215 (6%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             ++Y +A   L   ++ K  +YF       PF   A+++ +  A+  +   +   A   
Sbjct: 43  NNKLYSEAQDALSGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWKDNETAAADQA 102

Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164
            + +I  +P+  ++ Y YYL GM +             Q + +   D +A +        
Sbjct: 103 VDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFSGQDMSER--DPQALRESYDAFKV 160

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V+RY  S Y   A   +    N LA+ EV    YY +RG YVAAI R QL + +Y  A 
Sbjct: 161 VVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKDYKGAP 220

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
             E+A+  ++ +Y  L     A +   ++   +P 
Sbjct: 221 AIEDALHIMILSYGKLNQPQLAEDTKRVLAGTFPD 255


>gi|254291984|ref|ZP_04962764.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|150422123|gb|EDN14090.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
          Length = 253

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 11/216 (5%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D V DV    ++Y +A   L+   +  A E        +PF   + +  L   +  Y   
Sbjct: 35  DVVPDVP-PSQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKND 93

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLM 158
                 +  E +    P  + +D+V Y+ G+++    R+  +D              K  
Sbjct: 94  DLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRRDRDPEPVKAA 153

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
                ++++RY NSPY + A+  +   +N+LA  ++    +YL+R  ++AAI R Q +  
Sbjct: 154 FSDFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLRREAWIAAINRTQELQK 213

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
            Y D E A +++   +EAY  L L D       L+Q
Sbjct: 214 TYPDTEAARKSLEIQLEAYQQLGLTDAIERTKQLMQ 249


>gi|126454430|ref|YP_001066470.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           1106a]
 gi|167719291|ref|ZP_02402527.1| competence lipoprotein ComL [Burkholderia pseudomallei DM98]
 gi|167738291|ref|ZP_02411065.1| competence lipoprotein ComL [Burkholderia pseudomallei 14]
 gi|167823888|ref|ZP_02455359.1| competence lipoprotein ComL [Burkholderia pseudomallei 9]
 gi|167845427|ref|ZP_02470935.1| competence lipoprotein ComL [Burkholderia pseudomallei B7210]
 gi|167893969|ref|ZP_02481371.1| competence lipoprotein ComL [Burkholderia pseudomallei 7894]
 gi|167902419|ref|ZP_02489624.1| competence lipoprotein ComL [Burkholderia pseudomallei NCTC 13177]
 gi|167918688|ref|ZP_02505779.1| competence lipoprotein ComL [Burkholderia pseudomallei BCC215]
 gi|217421678|ref|ZP_03453182.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           576]
 gi|242317204|ref|ZP_04816220.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           1106b]
 gi|254297449|ref|ZP_04964902.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           406e]
 gi|126228072|gb|ABN91612.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           1106a]
 gi|157807603|gb|EDO84773.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           406e]
 gi|217395420|gb|EEC35438.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           576]
 gi|242140443|gb|EES26845.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           1106b]
          Length = 274

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 17/210 (8%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             ++Y +A   L   ++ K  +YF       PF   A+++ +  A+  +   +   A   
Sbjct: 43  NNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWKDNETAAADQA 102

Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164
            + +I  +P+  +V Y YYL GM +             Q + +   D +A +        
Sbjct: 103 VDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQDMSER--DPQALRESYDAFKV 160

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V+RY  S Y   A   +    N LA+ EV    YY +RG YVAAI R QL +  Y +A 
Sbjct: 161 VVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYKNAP 220

Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251
             E+A+  ++ +Y  L    L D+ + V++
Sbjct: 221 AIEDALHIMMLSYAKLNQPQLADDTKRVLA 250


>gi|238756472|ref|ZP_04617779.1| hypothetical protein yruck0001_32310 [Yersinia ruckeri ATCC 29473]
 gi|238705321|gb|EEP97731.1| hypothetical protein yruck0001_32310 [Yersinia ruckeri ATCC 29473]
          Length = 243

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 103/237 (43%), Gaps = 15/237 (6%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
             + A   LV     S++DV  D+        E+Y  A   L++ NF  A          
Sbjct: 7   LVAAATLSLVLTGCSSNKDVVPDNPP-----SELYATAQQKLQDGNFKGAITQLEALDNR 61

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM-- 144
           +PF   +++  L   +  Y +     A +  + ++   P   N+DYV Y+ G++   +  
Sbjct: 62  YPFGPYSQQVQLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVLYMRGLTDMALDD 121

Query: 145 --------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
                   I     D +  K   +  +++++ + NS Y   A+  +   +N+LA  E+ +
Sbjct: 122 SALQGFFGIDRSDRDPQHAKAAFRDFNQLIQSHPNSQYATDAQKRLVYLKNRLAKHELAV 181

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
             YY KRG YVA I R + ++ +Y   +   +A+  +  AY  + L  +A +V  +I
Sbjct: 182 AEYYTKRGAYVAVINRVEQMMRDYPGTQATRDALPLMENAYKQIQLNAQADKVNKVI 238


>gi|188534768|ref|YP_001908565.1| outer membrane protein assembly complex subunit YfiO [Erwinia
           tasmaniensis Et1/99]
 gi|188029810|emb|CAO97691.1| Conserved hypothetical protein [Erwinia tasmaniensis Et1/99]
          Length = 243

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 94/222 (42%), Gaps = 15/222 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
            S+DV  DS        E+Y  A   L++ NF  A          +PF   +++  L   
Sbjct: 22  GSKDVVPDSPP-----SEIYATAQQKLQDGNFKGAITQLEALDNRYPFGPYSQQVQLDLI 76

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYD 151
           +  Y       A +  + ++   P   N+DYV Y+ G++   +          I     D
Sbjct: 77  YAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVIYMRGLTDMALDDSALQGFFGIDRSDRD 136

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
               +   +  S+++  Y NS Y   A   +   +++LA  E+ +  +Y KRG YVA + 
Sbjct: 137 PTHARDAFKDFSQLLRGYPNSQYATDAHKRLVFLKDRLAKYELSVVEFYTKRGAYVAVVN 196

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           R + +L +Y D +   +A+  +  AY  L L  +A  V  +I
Sbjct: 197 RVEQMLKDYPDTQATHKALPLMENAYRQLQLNSQAERVAKII 238


>gi|255743835|ref|ZP_05417791.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio cholera CIRS
           101]
 gi|262156054|ref|ZP_06029173.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio cholerae INDRE
           91/1]
 gi|262191806|ref|ZP_06049977.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio cholerae CT
           5369-93]
 gi|18203202|sp|Q9KU21|Y708_VIBCH RecName: Full=UPF0169 lipoprotein VC_0708; Flags: Precursor
 gi|255738466|gb|EET93855.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio cholera CIRS
           101]
 gi|262030090|gb|EEY48735.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio cholerae INDRE
           91/1]
 gi|262032293|gb|EEY50860.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio cholerae CT
           5369-93]
 gi|327483505|gb|AEA77912.1| Probable component of the lipoprotein assembly complex (forms a
           complex with YaeT, YfgL, and NlpB) [Vibrio cholerae
           LMA3894-4]
          Length = 241

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 11/216 (5%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D V DV    ++Y +A   L+   +  A E        +PF   + +  L   +  Y   
Sbjct: 23  DVVPDVP-PSQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKND 81

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLM 158
                 +  E +    P  + +D+V Y+ G+++    R+  +D              K  
Sbjct: 82  DLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRRDRDPEPVKAA 141

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
                ++++RY NSPY + A+  +   +N+LA  ++    +YL+R  ++AAI R Q +  
Sbjct: 142 FADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLRREAWIAAINRTQELQK 201

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
            Y D E A +++   +EAY  L L D       L+Q
Sbjct: 202 TYPDTEAARKSLEIQLEAYQQLGLTDAIERTKQLMQ 237


>gi|332535271|ref|ZP_08411073.1| putative component of the lipoprotein assembly complex
           [Pseudoalteromonas haloplanktis ANT/505]
 gi|332035302|gb|EGI71806.1| putative component of the lipoprotein assembly complex
           [Pseudoalteromonas haloplanktis ANT/505]
          Length = 254

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/237 (22%), Positives = 110/237 (46%), Gaps = 12/237 (5%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           ++ K A  I FS++V  L      S+ D         +    +YE A   L    +++A 
Sbjct: 4   KIGKRAFAIVFSVSVLSLGAC--SSAPDQEDIQRVPNKSAHALYEDAKETLDSGLYARAI 61

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           E  +     +PF   +++  +   +  Y +G  +QA +  + +I   P  K++DY+YY+ 
Sbjct: 62  ELLSAIDSRYPFGPFSKQVQMDLVYAHYQSGNTEQALATIDRFIRLNPNHKDLDYMYYMR 121

Query: 138 GMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           G+   +  ++             D   T++    +S +V+R+  S Y   A+  +    N
Sbjct: 122 GLVNIKADKNAFQEYFGVDRADRDANRTRVAFTDLSTLVKRFPKSDYAPEAKRRLVWLLN 181

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
           ++A  E+++  YY +R  Y+AA  R + V+ +YS + + + A+  + ++Y  L L +
Sbjct: 182 RMARYELKVATYYYEREAYLAAANRGKFVVEHYSQSSYLDPALEMMEKSYDQLGLTE 238


>gi|107029026|ref|YP_626121.1| DNA uptake lipoprotein-like [Burkholderia cenocepacia AU 1054]
 gi|116689815|ref|YP_835438.1| DNA uptake lipoprotein-like protein [Burkholderia cenocepacia
           HI2424]
 gi|170733154|ref|YP_001765101.1| DNA uptake lipoprotein-like protein [Burkholderia cenocepacia
           MC0-3]
 gi|105898190|gb|ABF81148.1| DNA uptake lipoprotein-like protein [Burkholderia cenocepacia AU
           1054]
 gi|116647904|gb|ABK08545.1| DNA uptake lipoprotein-like protein [Burkholderia cenocepacia
           HI2424]
 gi|169816396|gb|ACA90979.1| DNA uptake lipoprotein-like protein [Burkholderia cenocepacia
           MC0-3]
          Length = 274

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 94/215 (43%), Gaps = 14/215 (6%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             ++Y +A   L   ++ K  +YF       PF   A+++ +  A+  +   +   A   
Sbjct: 43  NNKLYSEAQDALSGGDWGKCAKYFESLQGRDPFGHFAQQAQINVAYCNWKDNEAAAADQA 102

Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164
            + +I  +P+  ++ Y YYL GM +             Q + +   D +A +        
Sbjct: 103 VDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFSGQDMSE--RDPQALRESYDAFKV 160

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V+R+  S Y   A   +    N LA+ EV    YY +RG YVAAI R QL + +Y  A 
Sbjct: 161 VVDRFPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKDYKGAP 220

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
             E+A+  ++ +Y  L   + A +   ++   +P 
Sbjct: 221 AIEDALHIMILSYGKLNQPELAEDTKRVLAGTFPD 255


>gi|259909397|ref|YP_002649753.1| outer membrane protein assembly complex subunit YfiO [Erwinia
           pyrifoliae Ep1/96]
 gi|224965019|emb|CAX56549.1| Outer membrane assembly lipoprotein YfiO [Erwinia pyrifoliae
           Ep1/96]
 gi|283479470|emb|CAY75386.1| UPF0169 lipoprotein PD_1756 precursor [Erwinia pyrifoliae DSM
           12163]
          Length = 243

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 15/222 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
            SRDV  DS        E+Y  A   L++ NF+ A          +PF   +++  L   
Sbjct: 22  GSRDVVPDSPP-----SEIYATAQQKLQDGNFNGAITQLEALDNRYPFGPYSQQVQLDLI 76

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYD 151
           +  Y       A +  + ++   P   N+DYV Y+ G++   +          I     D
Sbjct: 77  YAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVIYMRGLTDMALDDSALQGFFGIDRSDRD 136

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
               +   +  S+++  Y NS Y   AR  +   +++LA  E+ +  +Y KR  YVA + 
Sbjct: 137 PTHARDAFKDFSQLLRGYPNSQYATDARKRLVFLKDRLAKYELSVAEFYTKRAAYVAVVN 196

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           R + +L +Y D     +A+  +  AY  L L  +A  V  +I
Sbjct: 197 RVEQMLKDYPDTLATRKALPLMENAYRKLQLNAQAERVAKII 238


>gi|260771764|ref|ZP_05880682.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio metschnikovii
           CIP 69.14]
 gi|260613056|gb|EEX38257.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio metschnikovii
           CIP 69.14]
          Length = 242

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 10/206 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y  A   L+  N+  A +        +PF   + +  L   +  Y         +  E
Sbjct: 32  ELYSDAQTSLQSGNWLTAIDKLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIE 91

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVER 168
            +I   P  + +D+V Y+ G+++    R+  +D              K       R++ER
Sbjct: 92  RFIRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRSDRDPEPVKAAFADFKRLLER 151

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS Y   A+  +   +N+LA  ++    +YL+R  ++AAI R Q +   Y   E A +
Sbjct: 152 YPNSLYANDAQQRMIALKNRLAEYDLATADFYLRREAWIAAINRTQELQKTYPGTEAARK 211

Query: 229 AMARLVEAYVALALMDEAREVVSLIQ 254
           +++  ++AY  L L D A     L+Q
Sbjct: 212 SLSIQLKAYQQLGLTDAAERTKQLMQ 237


>gi|206560229|ref|YP_002230993.1| putative lipoprotein [Burkholderia cenocepacia J2315]
 gi|198036270|emb|CAR52166.1| putative lipoprotein [Burkholderia cenocepacia J2315]
          Length = 274

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 94/215 (43%), Gaps = 14/215 (6%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             ++Y +A   L   ++ K  +YF       PF   A+++ +  A+  +   +   A   
Sbjct: 43  NNKLYSEAQDALSGGDWGKCAKYFESLQGRDPFGHFAQQAQINVAYCNWKDNEPAAADQA 102

Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164
            + +I  +P+  ++ Y YYL GM +             Q + +   D +A +        
Sbjct: 103 VDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFSGQDMSE--RDPQALRESYDAFKV 160

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V+R+  S Y   A   +    N LA+ EV    YY +RG YVAAI R QL + +Y  A 
Sbjct: 161 VVDRFPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKDYKGAP 220

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
             E+A+  ++ +Y  L   + A +   ++   +P 
Sbjct: 221 AIEDALHIMILSYGKLNQPELAEDTKRVLAGTFPD 255


>gi|76811535|ref|YP_333729.1| competence lipoprotein ComL [Burkholderia pseudomallei 1710b]
 gi|76580988|gb|ABA50463.1| competence lipoprotein ComL [Burkholderia pseudomallei 1710b]
          Length = 313

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 17/210 (8%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             ++Y +A   L   ++ K  +YF       PF   A+++ +  A+  +   +   A   
Sbjct: 82  NNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWKDNETAAADQA 141

Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164
            + +I  +P+  +V Y YYL GM +             Q + +   D +A +        
Sbjct: 142 VDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQDMSER--DPQALRESYDAFKV 199

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V+RY  S Y   A   +    N LA+ EV    YY +RG YVAAI R QL +  Y +A 
Sbjct: 200 VVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYKNAP 259

Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251
             E+A+  ++ +Y  L    L D+ + V++
Sbjct: 260 AIEDALHIMMLSYAKLNQPQLADDTKRVLA 289


>gi|83719596|ref|YP_442773.1| competence lipoprotein ComL [Burkholderia thailandensis E264]
 gi|83653421|gb|ABC37484.1| competence lipoprotein ComL [Burkholderia thailandensis E264]
          Length = 313

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 17/210 (8%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             ++Y +A   L   ++ K  +YF       PF   A+++ +  A+  +   +   A   
Sbjct: 82  NNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWKDNETAAADQA 141

Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164
            + +I  +P+  +V Y YYL GM +             Q + +   D +A +        
Sbjct: 142 VDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQDMSER--DPQALRESYDAFKV 199

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V+RY  S Y   A   +    N LA+ EV    YY +RG YVAAI R QL +  Y +A 
Sbjct: 200 VVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYKNAP 259

Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251
             E+A+  ++ +Y  L    L D+ + V++
Sbjct: 260 AIEDALHIMMLSYAKLNQPQLADDTKRVLA 289


>gi|15640727|ref|NP_230357.1| hypothetical protein VC0708 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121587776|ref|ZP_01677536.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|153801890|ref|ZP_01956476.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|153818714|ref|ZP_01971381.1| lipoprotein, putative [Vibrio cholerae NCTC 8457]
 gi|153822751|ref|ZP_01975418.1| lipoprotein, putative [Vibrio cholerae B33]
 gi|153826781|ref|ZP_01979448.1| lipoprotein, putative [Vibrio cholerae MZO-2]
 gi|153829373|ref|ZP_01982040.1| putative lipoprotein [Vibrio cholerae 623-39]
 gi|227080888|ref|YP_002809439.1| hypothetical protein VCM66_0666 [Vibrio cholerae M66-2]
 gi|229505674|ref|ZP_04395184.1| hypothetical protein VCF_000885 [Vibrio cholerae BX 330286]
 gi|229508753|ref|ZP_04398246.1| hypothetical protein VCE_000158 [Vibrio cholerae B33]
 gi|229512404|ref|ZP_04401878.1| hypothetical protein VCB_000044 [Vibrio cholerae TMA 21]
 gi|229519497|ref|ZP_04408940.1| hypothetical protein VCC_003527 [Vibrio cholerae RC9]
 gi|229519978|ref|ZP_04409408.1| hypothetical protein VIF_000494 [Vibrio cholerae TM 11079-80]
 gi|229530512|ref|ZP_04419900.1| hypothetical protein VCG_003632 [Vibrio cholerae 12129(1)]
 gi|229608692|ref|YP_002879340.1| hypothetical protein VCD_003614 [Vibrio cholerae MJ-1236]
 gi|254851038|ref|ZP_05240388.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|297580829|ref|ZP_06942755.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|298500819|ref|ZP_07010622.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|9655150|gb|AAF93873.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121548003|gb|EAX58083.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|124122601|gb|EAY41344.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|126510736|gb|EAZ73330.1| lipoprotein, putative [Vibrio cholerae NCTC 8457]
 gi|126519734|gb|EAZ76957.1| lipoprotein, putative [Vibrio cholerae B33]
 gi|148875156|gb|EDL73291.1| putative lipoprotein [Vibrio cholerae 623-39]
 gi|149739432|gb|EDM53672.1| lipoprotein, putative [Vibrio cholerae MZO-2]
 gi|227008776|gb|ACP04988.1| conserved hypothetical protein [Vibrio cholerae M66-2]
 gi|229332285|gb|EEN97773.1| hypothetical protein VCG_003632 [Vibrio cholerae 12129(1)]
 gi|229343030|gb|EEO08018.1| hypothetical protein VIF_000494 [Vibrio cholerae TM 11079-80]
 gi|229344186|gb|EEO09161.1| hypothetical protein VCC_003527 [Vibrio cholerae RC9]
 gi|229350554|gb|EEO15500.1| hypothetical protein VCB_000044 [Vibrio cholerae TMA 21]
 gi|229354277|gb|EEO19207.1| hypothetical protein VCE_000158 [Vibrio cholerae B33]
 gi|229357897|gb|EEO22814.1| hypothetical protein VCF_000885 [Vibrio cholerae BX 330286]
 gi|229371347|gb|ACQ61770.1| hypothetical protein VCD_003614 [Vibrio cholerae MJ-1236]
 gi|254846743|gb|EET25157.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|297535245|gb|EFH74080.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297540600|gb|EFH76658.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
          Length = 253

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 11/216 (5%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D V DV    ++Y +A   L+   +  A E        +PF   + +  L   +  Y   
Sbjct: 35  DVVPDVP-PSQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKND 93

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLM 158
                 +  E +    P  + +D+V Y+ G+++    R+  +D              K  
Sbjct: 94  DLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRRDRDPEPVKAA 153

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
                ++++RY NSPY + A+  +   +N+LA  ++    +YL+R  ++AAI R Q +  
Sbjct: 154 FADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLRREAWIAAINRTQELQK 213

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
            Y D E A +++   +EAY  L L D       L+Q
Sbjct: 214 TYPDTEAARKSLEIQLEAYQQLGLTDAIERTKQLMQ 249


>gi|47779343|gb|AAT38572.1| predicted secreted lipoprotein [uncultured gamma proteobacterium
           eBACHOT4E07]
          Length = 272

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 101/243 (41%), Gaps = 26/243 (10%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
           F L +   IA C   G E +    +Y             Y++A   +   N+  A E   
Sbjct: 13  FGLFLTLIIAGCKSDGEEIEQPEKIY-------------YDQAQARMSSGNYFGAIESLE 59

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
                +PF   A ++ +   +  +   + + A S  E++I  +P   N+DY Y++ G+S 
Sbjct: 60  AIDTRYPFGKYAEQAQIELIYAHFMNTETEAAHSAAEKFIRLHPRHPNIDYAYFMKGLSS 119

Query: 142 AQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
               RD+            D    K     ++  + R+ +S YV  A+      RN +A 
Sbjct: 120 YTRDRDLLIRFTDTDISNRDVSGAKASFAELTEFITRFPDSQYVSYAKQRNIYLRNLIAK 179

Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEARE 248
            E+    YYL    ++ AI R   V+ N  ++     A+  L E+Y AL    L+++ R+
Sbjct: 180 SELSAADYYLTIDAHIGAIRRANYVIENIPNSSENYRALKILEESYEALGYTELLEDIRQ 239

Query: 249 VVS 251
           V+S
Sbjct: 240 VLS 242


>gi|254252276|ref|ZP_04945594.1| competence lipoprotein ComL [Burkholderia dolosa AUO158]
 gi|124894885|gb|EAY68765.1| competence lipoprotein ComL [Burkholderia dolosa AUO158]
          Length = 309

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 14/215 (6%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             ++Y +A   L   ++ K  +YF       PF   A+++ +  A+  +   +   A   
Sbjct: 78  NNKLYSEAQDALSGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWKDNEIAAADQA 137

Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164
            + +I  +P+  ++ Y YYL GM +             Q + +   D +A +        
Sbjct: 138 VDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSE--RDPQALRESYDAFKV 195

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V+RY  S Y   A   +    N LA+ EV    YY +RG YVAAI R QL + +Y  A 
Sbjct: 196 VVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKDYKGAP 255

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
             E+A+  +V +Y  L     A +   ++   +P 
Sbjct: 256 AIEDALHIMVLSYGKLNQPQLAEDTKRVLAGTFPD 290


>gi|332970081|gb|EGK09078.1| competence lipoprotein ComL [Kingella kingae ATCC 23330]
          Length = 268

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 109/255 (42%), Gaps = 19/255 (7%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA-- 76
           + KF L I  + A+          S+D  L   T      ++Y +A   L + N+++A  
Sbjct: 1   MKKFLLVISVAAALSACASNASTVSKDAQL---TQNWSNDQLYSEARQELNDGNYTRATA 57

Query: 77  -YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
            YE       D  +     +SL+ SA+  +   +  +A      +   YP S ++DY  Y
Sbjct: 58  LYELLRARQADGRYT---EQSLIESAYAHFKNEEPAKALQNLARFEQNYPASVDMDYALY 114

Query: 136 LVGM-------SYAQMIRDVPY---DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           L G+       S+ + +    +   D  A +   +   ++V RY NS Y + AR  +   
Sbjct: 115 LKGLVLFAEDQSFLRRLASQDWSDRDPEANRRAFRVFEQLVNRYPNSKYAEDARKRMAQL 174

Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
            + L   E+ I RYY KR  Y+AA  R Q +L  + +  + EEA+A +V  Y  +   D 
Sbjct: 175 VDALGGHEIAIARYYAKRTAYLAANNRAQRILEQFQNTRYVEEALAIMVYTYEQMGNADM 234

Query: 246 AREVVSLIQERYPQG 260
           A     ++ +  P  
Sbjct: 235 AEATRRVLAQNLPNS 249


>gi|108757392|ref|YP_630233.1| putative competence lipoprotein ComL [Myxococcus xanthus DK 1622]
 gi|108461272|gb|ABF86457.1| putative competence lipoprotein ComL [Myxococcus xanthus DK 1622]
          Length = 261

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 14/202 (6%)

Query: 68  LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
           L+ ++F +A +YF      FP+   AR++ L  A V +    + +A    + +I  +P  
Sbjct: 49  LENKDFFRAQKYFEYVRTKFPYQEAAREAELKLADVDFEREAFPEAKEQYQSFIKLHPTH 108

Query: 128 KNVDYVYYLVGMSYAQMIRDVP-----------YDQRATKLMLQYMSRIVERYTNSPYVK 176
             VDY  +   M++   +R  P            DQ   +  L  M   + +Y  S YV 
Sbjct: 109 AKVDYAAFRSAMTH---VRAYPSEFFALPPSREKDQGEIRSALVAMEEFLRQYPQSQYVA 165

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
            A+      R +LA+ E+   ++Y KR  + A   R + +L  Y   E+ EEA+  L +A
Sbjct: 166 EAKTQREDARRRLASHELYAAQFYQKRERWKAVAQRLEGLLRRYPGTEYEEEALFDLHDA 225

Query: 237 YVALALMDEAREVVSLIQERYP 258
           YV L   ++A++ +  +  R P
Sbjct: 226 YVKLNDTEKAQDTLRQVLRRLP 247


>gi|218885504|ref|YP_002434825.1| lipoprotein [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218756458|gb|ACL07357.1| putative lipoprotein [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 246

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 88/177 (49%), Gaps = 8/177 (4%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +E++E     ++E+ + +A E F++    FPF+    ++ L  A   +    Y  A    
Sbjct: 40  QELFEAGNDSMREKRYGEAAESFSKLKEQFPFSPYTIEAELSLADAHFLDEDYLLAGEAY 99

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM--LQYMSRIVERYTNSPYV 175
           +E+ T +P  + + YV Y VG S  +    +  D+  T L   +QY  R+ E Y  + Y 
Sbjct: 100 KEFETLHPRHEAIPYVLYQVGQSRQKAFLSI--DRPTTGLTEAIQYYQRLRESYPGTEYA 157

Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE----HAEE 228
           + A+ ++T  R  LA +E+ IG ++ +   Y AA  R+  V+ N+ + E    HAEE
Sbjct: 158 EKAKQHITECRRLLAERELYIGDFFWRAERYGAAWRRYVYVVENFPEIEDLRSHAEE 214


>gi|298531012|ref|ZP_07018413.1| outer membrane assembly lipoprotein YfiO [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298509035|gb|EFI32940.1| outer membrane assembly lipoprotein YfiO [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 243

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/213 (23%), Positives = 100/213 (46%), Gaps = 7/213 (3%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +E+ +  V  ++++ ++KA EYF+     FPF+     + +        +G Y  A ++ 
Sbjct: 37  QELAQAGVDAMEQERYNKAIEYFSDLRDRFPFSPHTPTAEVALGDAYMKSGNYDAAITVF 96

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
            E+    P  + + YV +  G+++      +   QR  +  L+Y  R+ + Y  + Y + 
Sbjct: 97  TEFAEMNPRHEYMPYVLFRTGLAHFNKFTSIDRPQRNMQEALEYFRRVAQVYPETEYAEY 156

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD-AEHAEEAMARLVEA 236
           +R+Y    R ++A  E+ I  +Y +   Y +A  R++ V+ N+ D  E+ E A  R   +
Sbjct: 157 SRYYKVQCRKKIAEHELYIADFYWRTKRYGSAYERYRYVMDNFEDLPEYVEYAGERAKRS 216

Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYVETL 269
           Y       + +E VS  +    +G W  +++ L
Sbjct: 217 YY------KHQEHVSSHKRATEEGSWRDWLDWL 243


>gi|254248089|ref|ZP_04941410.1| Competence lipoprotein ComL [Burkholderia cenocepacia PC184]
 gi|124872865|gb|EAY64581.1| Competence lipoprotein ComL [Burkholderia cenocepacia PC184]
          Length = 309

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 94/215 (43%), Gaps = 14/215 (6%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             ++Y +A   L   ++ K  +YF       PF   A+++ +  A+  +   +   A   
Sbjct: 78  NNKLYSEAQDALSGGDWGKCAKYFESLQGRDPFGHFAQQAQINVAYCNWKDNEAAAADQA 137

Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164
            + +I  +P+  ++ Y YYL GM +             Q + +   D +A +        
Sbjct: 138 VDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFSGQDMSE--RDPQALRESYDAFKV 195

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V+R+  S Y   A   +    N LA+ EV    YY +RG YVAAI R QL + +Y  A 
Sbjct: 196 VVDRFPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKDYKGAP 255

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
             E+A+  ++ +Y  L   + A +   ++   +P 
Sbjct: 256 AIEDALHIMILSYGKLNQPELAEDTKRVLAGTFPD 290


>gi|300722271|ref|YP_003711555.1| putative lipoprotein [Xenorhabdus nematophila ATCC 19061]
 gi|297628772|emb|CBJ89350.1| putative lipoprotein with tetratricopeptide repeats (TPR) domain
           [Xenorhabdus nematophila ATCC 19061]
          Length = 243

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/216 (24%), Positives = 97/216 (44%), Gaps = 13/216 (6%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D+V D+    ++Y      L+E N+  A +        +PF   +++  L   +  Y + 
Sbjct: 25  DAVPDIP-PSQIYSIGQEKLQEGNYKAAIKQLESLDNRYPFGPYSQQVQLDLIYAYYKSA 83

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY-----------DQRATKL 157
           ++  A +  + +I   P   N+DYV+Y+ G+  +Q + D              D    + 
Sbjct: 84  EFPLAIASIDRFIRLNPTHPNIDYVWYMRGL-VSQALDDSALQEFFGIDRSDRDPEHARA 142

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
             +  + ++  Y +S Y   A   +   + +LA  E+ +  YY KR  YVA + R + +L
Sbjct: 143 AFRDFNHLIHDYPSSQYSADAIKRLAFLKERLARYELAVVEYYTKRSAYVAVVNRVEQML 202

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +Y D     EA++ +  AY  L L+ EA +V  LI
Sbjct: 203 RDYPDTHATREALSYMESAYKELGLIAEADKVAKLI 238


>gi|24375081|ref|NP_719124.1| hypothetical protein SO_3580 [Shewanella oneidensis MR-1]
 gi|24349840|gb|AAN56568.1|AE015795_2 conserved hypothetical protein [Shewanella oneidensis MR-1]
          Length = 268

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 87/212 (41%), Gaps = 10/212 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y +A   ++  N+SKA          FPF     +  L   +  Y         +  +
Sbjct: 52  ELYSQARTSMELGNYSKAVRSLEALDSRFPFGPHKTQVQLDLIYAYYKMDDVASGIANID 111

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168
            +I   P   N+DYVYY+ G+   Q           I     D +  +   +   R+++ 
Sbjct: 112 RFIRLNPTHPNIDYVYYMRGLVNMQADSYLFHDMLNIDRTDRDPKNAQDAFKDFDRLIKT 171

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS Y   A+  +   +N+LA   +++  YY+K   + AA  R Q VL  Y      E 
Sbjct: 172 YPNSKYAADAQKRMLSLKNRLAKYSIQVAEYYIKMNAWSAAAVRAQSVLETYPGTPSTER 231

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           A+  + EAY  L      + V+ ++Q  +P  
Sbjct: 232 ALEIMAEAYGELGQNQLKQNVLMVMQANFPNN 263


>gi|77359879|ref|YP_339454.1| TPR repeat-containing lipoprotein [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76874790|emb|CAI86011.1| putative lipoprotein with tetratricopeptide repeats (TPR) domain
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 254

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 108/235 (45%), Gaps = 12/235 (5%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           ++ K A  I FS++V  L      S+ D         +    +YE A   L    +++A 
Sbjct: 4   KIGKRAFAIVFSVSVLSLGAC--SSAPDQEDIQRVPNKSAHALYEDAKQTLDSGLYARAI 61

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           E  +     +PF   +++  +   +  Y +G  +QA +  + +I   P  K++DY+YY+ 
Sbjct: 62  ELLSAIDSRYPFGPFSKQVQMDLVYAHYQSGNTEQALATIDRFIRLNPNHKDLDYMYYMR 121

Query: 138 GMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           G+   +  ++             D   T++    +S +V+R+  S Y   A+  +    N
Sbjct: 122 GLVNIKADKNAFQEYFGVDRADRDANRTRVAFTDLSTLVKRFPQSDYAPEAKRRLVWLLN 181

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
           ++A  E+++  YY +R  Y+AA  R + V+ +YS + +   A+  + ++Y  L L
Sbjct: 182 RMARYELKVATYYYEREAYLAAANRGKFVVEHYSQSSYLNSALEMMEKSYDKLGL 236


>gi|261212186|ref|ZP_05926472.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio sp. RC341]
 gi|260838794|gb|EEX65445.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio sp. RC341]
          Length = 241

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 11/210 (5%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y +A   L+   +  A E        +PF   + +  L   +  Y         +  E
Sbjct: 32  ELYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIE 91

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVER 168
            +    P  + +D+V Y+ G+++    R+  +D              K       ++++R
Sbjct: 92  RFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNVDRFDRDPEPVKAAFADFKKLLQR 151

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NSPY + A+  +   +N+LA  ++    +YL+R  ++AAI R Q +   Y D E A +
Sbjct: 152 YPNSPYAEDAQRRMYALKNRLAEYDLATADFYLRREAWIAAINRTQELQKTYPDTEAARK 211

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYP 258
           A+   +EAY  L L  EA E   L+ +  P
Sbjct: 212 ALEIQLEAYQQLGLT-EAVERTKLLMQLNP 240


>gi|120599939|ref|YP_964513.1| putative lipoprotein [Shewanella sp. W3-18-1]
 gi|146292125|ref|YP_001182549.1| putative lipoprotein [Shewanella putrefaciens CN-32]
 gi|120560032|gb|ABM25959.1| putative lipoprotein [Shewanella sp. W3-18-1]
 gi|145563815|gb|ABP74750.1| putative lipoprotein [Shewanella putrefaciens CN-32]
          Length = 253

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/211 (24%), Positives = 87/211 (41%), Gaps = 10/211 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y +A   ++  N++KA          FPF     +  L   +  Y         +  + 
Sbjct: 38  LYSQARTSMELGNYAKAVRSLEALDSRFPFGPHKTQVQLDLIYAYYKMDDVASGIANIDR 97

Query: 120 YITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERY 169
           +I   P   N+DYVYY+ G+   Q           I     D +  +   +   R+++ Y
Sbjct: 98  FIRLNPTHPNIDYVYYMRGLVNMQADNYLFHDMLSIDRTDRDPKNAQDAFKDFDRLIKTY 157

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
            NS Y   A+  +   +N+LA   +++  YYLK   + AA  R Q VL  Y      E A
Sbjct: 158 PNSKYAADAQKRMFSLKNRLAKYSIQVAEYYLKMNAWSAAAIRAQSVLETYPGTPSTERA 217

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260
           +  ++EAY  L      + V+ ++Q  YP  
Sbjct: 218 LEIMIEAYGELGQNQLKQNVLMVMQANYPNN 248


>gi|253689513|ref|YP_003018703.1| outer membrane assembly lipoprotein YfiO [Pectobacterium
           carotovorum subsp. carotovorum PC1]
 gi|251756091|gb|ACT14167.1| outer membrane assembly lipoprotein YfiO [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 244

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 98/222 (44%), Gaps = 15/222 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           +S+D   DS        E+Y  A   L++ NF  A          +PF   +++  L   
Sbjct: 23  NSKDAVPDSPP-----SEIYANAQQKLQDGNFKAAITQLEALDNRYPFGPYSQQVQLDLI 77

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYD 151
           +  Y + +   A +  + ++   P   NVDYV Y+ G++   +          +     D
Sbjct: 78  YAYYKSAELPLAQASIDRFLRLNPTHPNVDYVLYMRGLTDMALDDSALQGFFGVDRSDRD 137

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
            +  +   +  S++++ Y NS Y   A   +   + +LA  E+ + +YY KR  YVA + 
Sbjct: 138 PQYARTAFRDFSKLIQGYPNSQYATDANKRLVYLKERLAKYELSVAQYYTKRSAYVAVVN 197

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           R + +L +Y D +  + A+  +  AY  L L  +A +V  +I
Sbjct: 198 RVEQMLRDYPDTQATKTALPLMENAYRELQLAAQADKVAKVI 239


>gi|161524653|ref|YP_001579665.1| competence lipoprotein ComL [Burkholderia multivorans ATCC 17616]
 gi|189350590|ref|YP_001946218.1| putative lipoprotein [Burkholderia multivorans ATCC 17616]
 gi|221198060|ref|ZP_03571106.1| putative competence lipoprotein ComL [Burkholderia multivorans
           CGD2M]
 gi|221204382|ref|ZP_03577399.1| putative competence lipoprotein ComL [Burkholderia multivorans
           CGD2]
 gi|221212789|ref|ZP_03585765.1| putative competence lipoprotein ComL [Burkholderia multivorans
           CGD1]
 gi|160342082|gb|ABX15168.1| competence lipoprotein ComL [Burkholderia multivorans ATCC 17616]
 gi|189334612|dbj|BAG43682.1| putative lipoprotein [Burkholderia multivorans ATCC 17616]
 gi|221167002|gb|EED99472.1| putative competence lipoprotein ComL [Burkholderia multivorans
           CGD1]
 gi|221175239|gb|EEE07669.1| putative competence lipoprotein ComL [Burkholderia multivorans
           CGD2]
 gi|221181992|gb|EEE14393.1| putative competence lipoprotein ComL [Burkholderia multivorans
           CGD2M]
          Length = 274

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 14/214 (6%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             ++Y +A   L   ++ K  +YF       PF   A+++ +  A+  +   +   A   
Sbjct: 43  NNKLYSEAQDALSGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWKDNEPAAADQA 102

Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164
            + +I  +P+  ++ Y YYL GM +             Q + +   D +A +        
Sbjct: 103 VDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSER--DPQALRESYDAFKV 160

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V+RY  S Y   A   +    N LA+ EV    YY +RG YVAAI R QL + +Y  A 
Sbjct: 161 VVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKDYKGAP 220

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
             E+A+  +V +Y  L     A +   ++   +P
Sbjct: 221 AIEDALHIMVLSYQKLNQPQLAEDTKRVLAGTFP 254


>gi|293392745|ref|ZP_06637063.1| competence lipoprotein ComL [Serratia odorifera DSM 4582]
 gi|291424604|gb|EFE97815.1| competence lipoprotein ComL [Serratia odorifera DSM 4582]
          Length = 243

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/222 (22%), Positives = 99/222 (44%), Gaps = 15/222 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           SS+D   D+        E+Y  A   L++ NF  A          +PF   +++  L   
Sbjct: 22  SSKDAVPDNPP-----SEIYANAQQKLQDGNFKGAITQLEALDNRYPFGPYSQQVQLDLI 76

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYD 151
           +  Y +     A +  + ++   P   N+DYV Y+ G++   +          +     D
Sbjct: 77  YAYYKSADLPLAQASIDRFMRLNPTHPNIDYVMYMRGLTDMALDDSALQGFFGVDRSDRD 136

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
            +  +   +  S+++++Y +S Y   A+  +   +++L+  E+ +  YY KRG YVA + 
Sbjct: 137 PQHARAAFRDFSQLIQQYPSSQYTPDAQKRLVYLKDRLSKYELSVAEYYTKRGAYVAVVN 196

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           R + ++  Y D +   +A+  +  AY  L L  +A +V  +I
Sbjct: 197 RVEQMMREYPDTKATRDALPLMENAYKQLQLNGQADKVAKII 238


>gi|319425421|gb|ADV53495.1| beta barrel protein translocation component, BamC [Shewanella
           putrefaciens 200]
          Length = 253

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/211 (24%), Positives = 87/211 (41%), Gaps = 10/211 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y +A   ++  N++KA          FPF     +  L   +  Y         +  + 
Sbjct: 38  LYSQARTSMELGNYAKAVRSLEALDSRFPFGPHKTQVQLDLIYAYYKMDDVASGIANIDR 97

Query: 120 YITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERY 169
           +I   P   N+DYVYY+ G+   Q           I     D +  +   +   R+++ Y
Sbjct: 98  FIRLNPTHPNIDYVYYMRGLVNMQADNYLFHDMLSIDRTDRDPKNAQDAFKDFDRLIKTY 157

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
            NS Y   A+  +   +N+LA   +++  YYLK   + AA  R Q VL  Y      E A
Sbjct: 158 PNSKYAADAQKRMFSLKNRLAKYSIQVAEYYLKMNAWSAAAIRAQSVLETYPGTPSTERA 217

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260
           +  ++EAY  L      + V+ ++Q  YP  
Sbjct: 218 LEIMIEAYGELGQNQLKQNVLMVMQANYPNN 248


>gi|209694253|ref|YP_002262181.1| outer membrane protein [Aliivibrio salmonicida LFI1238]
 gi|208008204|emb|CAQ78348.1| outer membrane protein [Aliivibrio salmonicida LFI1238]
          Length = 255

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 10/205 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y +A + L+  N++ A E        +PF   + +  L   +V Y         +  E
Sbjct: 46  ELYSQAQISLQAGNWTSAVERLEALDSRYPFGAYSEQVQLDLIYVYYKNDDLALGLATIE 105

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVER 168
            +    P +   D+V Y+ G+++    R   +D              +   +   R++ER
Sbjct: 106 RFNRLNPTNPKADWVLYMRGLTHMAQDRSFMHDLFRVNRSDRDPEPARSAFKDFKRLLER 165

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y +S Y + A+  +   +N+LA  E+    +YL+R  +++AI R Q +   Y D E A +
Sbjct: 166 YPDSLYAEDAQTRMFALKNRLADYELATADFYLRREAWISAINRSQELQRTYPDTEAARK 225

Query: 229 AMARLVEAYVALALMDEAREVVSLI 253
           ++  ++ AY  L L D  +    LI
Sbjct: 226 SLTIMLSAYKELKLDDAIQRTEELI 250


>gi|167562572|ref|ZP_02355488.1| competence lipoprotein ComL [Burkholderia oklahomensis EO147]
 gi|167569755|ref|ZP_02362629.1| competence lipoprotein ComL [Burkholderia oklahomensis C6786]
          Length = 274

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 94/210 (44%), Gaps = 17/210 (8%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             ++Y +A   L   ++ K  +YF       PF   A+++ +  A+  +   +   A   
Sbjct: 43  NNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWKDNEAAAADQA 102

Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164
            + +I  +P+  ++ Y YYL GM +             Q + +   D +A +        
Sbjct: 103 IDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSER--DPQALRESYDAFKV 160

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V+RY  S Y   A   +    N LA+ EV    YY +RG YVAAI R QL +  Y +A 
Sbjct: 161 VVDRYPKSKYAPDAAARMRYIVNALASHEVHSADYYYRRGAYVAAINRAQLAIKEYKNAP 220

Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251
             E+A+  ++ +Y  L    L D+ + V++
Sbjct: 221 AIEDALHIMMLSYAKLNQPQLADDTKRVLA 250


>gi|78066564|ref|YP_369333.1| DNA uptake lipoprotein-like [Burkholderia sp. 383]
 gi|77967309|gb|ABB08689.1| DNA uptake lipoprotein-like protein [Burkholderia sp. 383]
          Length = 274

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 14/215 (6%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             ++Y +A   L   ++ K  +YF       PF   A+++ +  A+  +   +   A   
Sbjct: 43  NNKLYSEAQDALSGGDWGKCAKYFESLQGRDPFGHFAQQAQINVAYCNWKDNEAAAADQA 102

Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164
            + +I  +P+  ++ Y YYL GM +             Q + +   D +A +        
Sbjct: 103 VDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFSGQDMSE--RDPQALRESYDAFKV 160

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V+R+  S Y   A   +    N LA+ EV    YY +RG YVAAI R QL + +Y  A 
Sbjct: 161 VVDRFPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKDYKGAP 220

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
             E+A+  ++ +Y  L     A +   ++   +P 
Sbjct: 221 AIEDALHIMILSYGKLNQPQLAEDTKRVLAGTFPD 255


>gi|255020043|ref|ZP_05292116.1| Probable component of the lipoprotein assembly complex (forms a
           complex with YaeT, YfgL, and NlpB) [Acidithiobacillus
           caldus ATCC 51756]
 gi|254970572|gb|EET28061.1| Probable component of the lipoprotein assembly complex (forms a
           complex with YaeT, YfgL, and NlpB) [Acidithiobacillus
           caldus ATCC 51756]
          Length = 209

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 86/191 (45%)

Query: 68  LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
           +   ++ +A   F     ++P+   A ++ L +A+  Y  G  + A +  + +I  +P +
Sbjct: 1   MDSGDYDRAIRDFQNLQAEYPYGPYAEQAQLDTAYAYYKQGDSKAAVAAADAFIKAHPVN 60

Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
            +VDY +YL G++  Q I    +D R     LQ    + + Y  S Y   AR ++    +
Sbjct: 61  PHVDYAWYLKGLAQYQAIEGAEFDPRPDYQALQTFRYVAKTYPKSAYALSARLHIAKIID 120

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
            L  + + I ++Y  R  +VAA  R   V+ +Y  +     A+  L  +Y  L L+  AR
Sbjct: 121 ILGERNLRICKFYYVRHAFVAAANRCVRVIRDYQLSPARNMALYYLARSYRRLDLLGLAR 180

Query: 248 EVVSLIQERYP 258
               ++    P
Sbjct: 181 TTAIILHHNAP 191


>gi|120602370|ref|YP_966770.1| lipoprotein [Desulfovibrio vulgaris DP4]
 gi|120562599|gb|ABM28343.1| putative lipoprotein [Desulfovibrio vulgaris DP4]
 gi|311233769|gb|ADP86623.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio vulgaris
           RCH1]
          Length = 243

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 100/228 (43%), Gaps = 21/228 (9%)

Query: 1   MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
           M   L RA C+           ALT  F ++ C ++ +        YL    D    +E+
Sbjct: 1   MRKTLLRAACMA----------ALT--FMLSGCGIIDY-------FYLPPPEDT--AQEL 39

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YE     ++E+++  A + + +   ++PF+    ++ L  A   +   +Y  AA   +E+
Sbjct: 40  YESGNDAMREKDYVAAAQAYTRLKDNYPFSPYTIEAELSLADAYFLDEEYPAAAEAYKEF 99

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
            T +P  + + YV Y VGM+  +    V       +   QY  R+ E Y  + Y   A  
Sbjct: 100 ETLHPRHQAIPYVLYQVGMARLKSFISVDRPVNNVQEAYQYFQRLRESYPGTEYAAKAEE 159

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           ++   R  LA +E+ I   Y + G+Y AA  R+  V  N+ D  HA E
Sbjct: 160 HMKECRRLLAERELFIADVYWRTGKYGAAWQRYSFVRDNFKDVPHAVE 207


>gi|158522066|ref|YP_001529936.1| DNA uptake lipoprotein-like protein [Desulfococcus oleovorans Hxd3]
 gi|158510892|gb|ABW67859.1| DNA uptake lipoprotein-like protein [Desulfococcus oleovorans Hxd3]
          Length = 255

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 86/188 (45%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +E+ ++   +  +  + K+ E F      +PF+ +   + L  A   ++  +Y+ A S  
Sbjct: 62  QELADEGTRYFDKGRYKKSIEAFENLRDWYPFSKLTTLADLKVADAYFNMEEYESAVSAY 121

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           E +   +P  ++V +V +  G+ +   +  +  DQ      +   SR+V  Y +S Y   
Sbjct: 122 ENFERLHPRHESVPFVIFRTGLCHFNRLDTIDRDQTPAHRAIDAFSRLVRAYPDSEYASQ 181

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           A  Y+   R  LAA E+ + ++Y K   Y +A+ RF+ ++  Y D    E A   +    
Sbjct: 182 ATDYIHQCRESLAAHELYVAKFYFKTKRYRSALYRFKQIIEKYPDVGDIETARRHIPLCE 241

Query: 238 VALALMDE 245
             LA M++
Sbjct: 242 EGLAEMEK 249


>gi|46580246|ref|YP_011054.1| competence protein [Desulfovibrio vulgaris str. Hildenborough]
 gi|46449663|gb|AAS96313.1| competence protein, putative [Desulfovibrio vulgaris str.
           Hildenborough]
          Length = 260

 Score = 66.2 bits (160), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 100/228 (43%), Gaps = 21/228 (9%)

Query: 1   MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
           M   L RA C+           ALT  F ++ C ++ +        YL    D    +E+
Sbjct: 18  MRKTLLRAACMA----------ALT--FMLSGCGIIDY-------FYLPPPEDT--AQEL 56

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YE     ++E+++  A + + +   ++PF+    ++ L  A   +   +Y  AA   +E+
Sbjct: 57  YESGNDAMREKDYVAAAQAYTRLKDNYPFSPYTIEAELSLADAYFLDEEYPAAAEAYKEF 116

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
            T +P  + + YV Y VGM+  +    V       +   QY  R+ E Y  + Y   A  
Sbjct: 117 ETLHPRHQAIPYVLYQVGMARLKSFISVDRPVNNVQEAYQYFQRLRESYPGTEYAAKAEE 176

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           ++   R  LA +E+ I   Y + G+Y AA  R+  V  N+ D  HA E
Sbjct: 177 HMKECRRLLAERELFIADVYWRTGKYGAAWQRYSFVRDNFKDVPHAVE 224


>gi|297170430|gb|ADI21462.1| DNA uptake lipoprotein [uncultured gamma proteobacterium
           HF0070_10G19]
          Length = 263

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 99/229 (43%), Gaps = 16/229 (6%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           +++ YE A   +  +N+  A +        +PF   A ++     +  Y  G  + A S 
Sbjct: 35  EQQYYELAQRRMNAKNYFAAIQSLEMIETRYPFGRFAEQAQAELIYANYMMGDDEAAHSA 94

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY------------DQRATKLMLQYMSR 164
            E++I  +P   N+DY Y++ G+  A   RD  +            D    K     +S 
Sbjct: 95  AEKFIRLHPRHPNIDYAYFMRGL--ASYTRDNSFFARVFKNSLARRDISGAKQSFNELSE 152

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
            + R++ S Y   A   +   RN +A  E+    YY+KR  Y+A++ R + V+ N  ++ 
Sbjct: 153 FLTRFSQSQYAPYANQRLIFLRNIIAKHELAAAEYYVKREAYIASLRRAKYVIENIPNSS 212

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSL--IQERYPQGYWARYVETLVK 271
              +A+  + ++Y+ L  +D A EV     I E   Q     Y+  + K
Sbjct: 213 ENLKALEIMKKSYLELGYLDLAEEVEETMRINETAKQNISDNYLSEIPK 261


>gi|310766695|gb|ADP11645.1| outer membrane protein assembly complex subunit YfiO [Erwinia sp.
           Ejp617]
          Length = 243

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 94/222 (42%), Gaps = 15/222 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
            +RDV  DS        E+Y  A   L++ NF+ A          +PF   +++  L   
Sbjct: 22  GARDVVPDSPP-----SEIYATAQQKLQDGNFNGAITQLEALDNRYPFGPYSQQVQLDLI 76

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYD 151
           +  Y       A +  + ++   P   N+DYV Y+ G++   +          I     D
Sbjct: 77  YAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVIYMRGLTDMALDDSALQGFFGIDRSDRD 136

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
               +   +  S+++  Y NS Y   AR  +   +++LA  E+ +  +Y KR  YVA + 
Sbjct: 137 PTHARDAFKDFSQLLRGYPNSQYATDARKRLVFLKDRLAKYELSVAEFYTKRAAYVAVVN 196

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           R + +L +Y D     +A+  +  AY  L L  +A  V  +I
Sbjct: 197 RVEQMLKDYPDTLATRKALPLMENAYRKLQLNAQAERVAKII 238


>gi|270264066|ref|ZP_06192334.1| hypothetical protein SOD_f02840 [Serratia odorifera 4Rx13]
 gi|270042259|gb|EFA15355.1| hypothetical protein SOD_f02840 [Serratia odorifera 4Rx13]
          Length = 243

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 95/215 (44%), Gaps = 11/215 (5%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D+V D     E+Y  A   L++ NF  A          +PF   +++  L   +  Y + 
Sbjct: 25  DAVPD-NPPSEIYATAQQKLQDGNFKGAITQLEALDNRYPFGPYSQQVQLDLIYAYYKSA 83

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLM 158
               A +  + ++   P   N+DYV Y+ G++   +          +     D +  +  
Sbjct: 84  DLPLAQASIDRFMRLNPTHPNIDYVMYMRGLTDMALDDSALQGFFGVDRSDRDPQHARAA 143

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
            +  S+++++Y  S YV  A   +   +++LA  E+ +  YY KRG YVA + R   +L 
Sbjct: 144 FRDFSQLIQQYPTSQYVTDANKRLVYLKDRLAKYELSVVEYYTKRGAYVAVVNRADQMLR 203

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            Y D +   +A+  +  AY  L L  +A +V  +I
Sbjct: 204 EYPDTQATRDALPLMENAYKQLQLNGQADKVAKVI 238


>gi|153834661|ref|ZP_01987328.1| lipoprotein, ComL family [Vibrio harveyi HY01]
 gi|156973323|ref|YP_001444230.1| hypothetical protein VIBHAR_01004 [Vibrio harveyi ATCC BAA-1116]
 gi|148868913|gb|EDL67971.1| lipoprotein, ComL family [Vibrio harveyi HY01]
 gi|156524917|gb|ABU70003.1| hypothetical protein VIBHAR_01004 [Vibrio harveyi ATCC BAA-1116]
          Length = 242

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 89/206 (43%), Gaps = 10/206 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y  A   L+  N+  A E        +PF   + +  L   +  Y         +   
Sbjct: 32  ELYADAQTSLQSGNWLSAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIS 91

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVER 168
            ++   P  + +D+V Y+ G+S+    R+  +D              K       +++ER
Sbjct: 92  RFMRLNPTHEKMDWVLYMRGLSHMAQDRNFMHDLFNVDRSDRDPEPVKKAFDDFKKLLER 151

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NSPY + ++  +   +N+LA  ++    +YL+R  ++AAI R Q +   + D E A +
Sbjct: 152 YPNSPYAEDSQKRMVALKNRLANYDLATADFYLRREAWIAAINRSQELQKAFPDTEAARK 211

Query: 229 AMARLVEAYVALALMDEAREVVSLIQ 254
           ++   +EAY  L L D       LI+
Sbjct: 212 SLEIQLEAYKQLKLDDAVARTEELIK 237


>gi|213646597|ref|ZP_03376650.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Typhi str. J185]
          Length = 270

 Score = 65.9 bits (159), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 88/205 (42%), Gaps = 10/205 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y  A   L++ N+ +A          +PF   +++  L   +  Y       A +  +
Sbjct: 34  EIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLMLQYMSRIVER 168
            ++   P   N+DYV Y+ G++   +   V            D +  +      S++V  
Sbjct: 94  RFMRLNPTHPNIDYVMYMRGLTNMALDDSVLQGFFGVDRSDRDPQHARAAFNDFSKLVRS 153

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS Y   A   +   +++LA  E  +  YY  RG +VA + R + +L NY D +   +
Sbjct: 154 YPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATRD 213

Query: 229 AMARLVEAYVALALMDEAREVVSLI 253
           A+  +  AY  + L  +A +V  +I
Sbjct: 214 ALPLMENAYRQMQLNAQADKVAKII 238


>gi|167587071|ref|ZP_02379459.1| DNA uptake lipoprotein-like [Burkholderia ubonensis Bu]
          Length = 274

 Score = 65.9 bits (159), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 14/214 (6%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             ++Y +A   L   ++ K  +YF       PF   A+++ +  A+  +   +   A   
Sbjct: 43  NNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWKDNEPAAADQA 102

Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164
            + +I  +P+  ++ Y YYL GM +             Q + +   D +A +        
Sbjct: 103 VDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFSGQDMSE--RDPQALRESYDAFKV 160

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V+RY  S Y   A   +    N LA+ EV    YY +RG YVAAI R QL +  Y  A 
Sbjct: 161 VVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYKGAP 220

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
             E+A+  ++ +Y  L     A +   ++   +P
Sbjct: 221 AIEDALHIMILSYDKLQQPQLAEDTKRVLAGTFP 254


>gi|194435121|ref|ZP_03067357.1| outer membrane assembly lipoprotein YfiO [Shigella dysenteriae
           1012]
 gi|194416652|gb|EDX32785.1| outer membrane assembly lipoprotein YfiO [Shigella dysenteriae
           1012]
 gi|332089242|gb|EGI94349.1| outer membrane assembly lipoprotein YfiO [Shigella dysenteriae
           155-74]
          Length = 245

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 90/205 (43%), Gaps = 10/205 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y  A   L++ N+ +A          +PF   +++  L   +  Y       A +  +
Sbjct: 34  EIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168
            +I   P   N+DYV Y+ G++   +          +     D +  ++     S++V  
Sbjct: 94  RFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARVAFSDFSKLVRG 153

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS Y   A   +   +N+LA  E  +  YY +RG +VA + R + +L +Y D +   +
Sbjct: 154 YPNSQYTTDATKRLVFLKNRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRD 213

Query: 229 AMARLVEAYVALALMDEAREVVSLI 253
           A+  +  AY  + +  +A +V  +I
Sbjct: 214 ALPLMENAYRQMQINAQAEKVAKII 238


>gi|319760322|ref|YP_004124260.1| putative lipoprotein [Candidatus Blochmannia vafer str. BVAF]
 gi|318039036|gb|ADV33586.1| putative lipoprotein [Candidatus Blochmannia vafer str. BVAF]
          Length = 261

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 47/222 (21%), Positives = 104/222 (46%), Gaps = 15/222 (6%)

Query: 50  SVTDVRYQR--EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           S   +++Q   ++Y+ A   L   N++++ +   + +   PF    ++  L   +  Y  
Sbjct: 39  SHHKIKHQNSSDLYKSAHDKLLHNNYTESIQKLLRLNNLHPFEPYPQQIYLDLIYAYYKL 98

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY-------------DQRA 154
             +Q A +  + +++ YP  KN+DYV Y+ G+    + ++  Y             +   
Sbjct: 99  HDFQSANNFIQRFLSSYPNHKNLDYVLYMQGLINMNLDKNNSYFAHKYWHKSWFKHNPSY 158

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
             +     S+I++ + NS Y   A   + + +N++A  E+ I ++Y +R  Y++ I R +
Sbjct: 159 ANIAFHSFSKIIQNHPNSQYYIDAYKRLIILKNRIANYELAIIKFYDQRNSYISVILRSE 218

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            +L  + +     EA+  +  AY  ++L+D++  V  +I E 
Sbjct: 219 RMLRYFPNTPATYEALYYMKRAYQKVSLLDQSNIVNKIISEN 260


>gi|312171424|emb|CBX79683.1| UPF0169 lipoprotein PD_1756 precursor [Erwinia amylovora ATCC
           BAA-2158]
          Length = 243

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 91/222 (40%), Gaps = 15/222 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
            SRD   DS        E+Y  A   L++ NF  A          +PF   +++  L   
Sbjct: 22  GSRDGVPDSPPS-----EIYATAQQKLQDGNFKGAITQLEALDNRYPFGPYSQQVQLDLI 76

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYD 151
           +  Y       A +  + ++   P   N+DYV Y+ G++   +          I     D
Sbjct: 77  YAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVIYMRGLTDMALDDSALQGFFGIDRSDRD 136

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
               +   +  S+++  Y NS Y   AR  +   + +LA  E+ +  +Y  RG YVA + 
Sbjct: 137 PTHARDAFKDFSQLLRGYPNSQYATDARKRLVFLKERLAKHELSVTEFYTNRGAYVAVVN 196

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           R + +L +Y D     +A+  +  AY  L L  +A  V  +I
Sbjct: 197 RVEQMLKDYPDTRATRKALPLMENAYRQLQLNAQAERVAKII 238


>gi|117921610|ref|YP_870802.1| putative lipoprotein [Shewanella sp. ANA-3]
 gi|117613942|gb|ABK49396.1| putative lipoprotein [Shewanella sp. ANA-3]
          Length = 282

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 10/211 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y +A   ++  N+SKA          FPF     +  L   +  Y         +  + 
Sbjct: 67  LYSQARTSMELGNYSKAVRSLEALDSRFPFGPHKTQVQLDLIYAYYKMDDVASGIANIDR 126

Query: 120 YITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERY 169
           +I   P   N+DYVYY+ G+   Q           I     D +  +   +   R+++ Y
Sbjct: 127 FIRLNPTHPNIDYVYYMRGLVNMQADSYLFHDMLNIDRTDRDPKNAQDAFKDFDRLIKTY 186

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
            NS Y   A+  +   +N+LA   +++  YY+K   + AA  R Q VL  Y      E A
Sbjct: 187 PNSKYAADAQKRMLSLKNRLAKYSIQVAEYYIKMNAWSAAAVRAQSVLETYPGTPSTERA 246

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260
           +  + EAY  L      + V+ ++Q  +P  
Sbjct: 247 LEIMAEAYGELGQNQLKQNVLMVMQANFPNN 277


>gi|289824163|ref|ZP_06543758.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-3139]
          Length = 269

 Score = 65.5 bits (158), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 88/205 (42%), Gaps = 10/205 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y  A   L++ N+ +A          +PF   +++  L   +  Y       A +  +
Sbjct: 34  EIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLMLQYMSRIVER 168
            ++   P   N+DYV Y+ G++   +   V            D +  +      S++V  
Sbjct: 94  RFMRLNPTHPNIDYVMYMRGLTNMALDDSVLQGFFGVDRSDRDPQHARAAFNDFSKLVRS 153

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS Y   A   +   +++LA  E  +  YY  RG +VA + R + +L NY D +   +
Sbjct: 154 YPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATRD 213

Query: 229 AMARLVEAYVALALMDEAREVVSLI 253
           A+  +  AY  + L  +A +V  +I
Sbjct: 214 ALPLMENAYRQMQLNAQADKVAKII 238


>gi|16761517|ref|NP_457134.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Typhi str. CT18]
 gi|29142988|ref|NP_806330.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
 gi|213051816|ref|ZP_03344694.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|213424874|ref|ZP_03357624.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Typhi str. E02-1180]
 gi|213850145|ref|ZP_03381043.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Typhi str. M223]
 gi|25306749|pir||AD0832 probable lipoprotein STY2852 [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16503818|emb|CAD05843.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
           Typhi]
 gi|29138620|gb|AAO70190.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
          Length = 245

 Score = 65.5 bits (158), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 88/206 (42%), Gaps = 10/206 (4%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            E+Y  A   L++ N+ +A          +PF   +++  L   +  Y       A +  
Sbjct: 33  NEIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAI 92

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLMLQYMSRIVE 167
           + ++   P   N+DYV Y+ G++   +   V            D +  +      S++V 
Sbjct: 93  DRFMRLNPTHPNIDYVMYMRGLTNMALDDSVLQGFFGVDRSDRDPQHARAAFNDFSKLVR 152

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y NS Y   A   +   +++LA  E  +  YY  RG +VA + R + +L NY D +   
Sbjct: 153 SYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATR 212

Query: 228 EAMARLVEAYVALALMDEAREVVSLI 253
           +A+  +  AY  + L  +A +V  +I
Sbjct: 213 DALPLMENAYRQMQLNAQADKVAKII 238


>gi|45644679|gb|AAS73067.1| predicted secreted lipoprotein ComL [uncultured marine gamma
           proteobacterium EBAC20E09]
          Length = 273

 Score = 65.5 bits (158), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 104/249 (41%), Gaps = 36/249 (14%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
            A  +  +I+ C   G E +    +Y             YE+A   +  +NF  A E   
Sbjct: 13  IAPILMIAISSCNSDGPEIEQPEKIY-------------YEQAQRRMAAKNFYGAIESLE 59

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
                +PF   A ++ +   +  +   + + + S  E++I  +P   N+DY Y++ G+S 
Sbjct: 60  AIENRYPFGKYAEQAQVELIYAHFMNSETEASHSAAEKFIRLHPRHPNIDYAYFMKGLS- 118

Query: 142 AQMIRDVPYDQRATKLMLQY------------MSRIVERYTNS---PYVKGARFYVTVGR 186
               RD  +  R T   L              ++  + R+ +S   PY K    Y+   R
Sbjct: 119 -SYTRDREFLTRFTDTDLSNRDISGAKESFSELTEFLTRFPDSQYAPYAKQRNVYL---R 174

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LM 243
           N +A  E+    YY+    YVAAI R   V+ N  ++     A+  L  +Y AL    L+
Sbjct: 175 NMIAKNELAAADYYITIDAYVAAIRRANYVIENIPNSSENYRALKLLETSYDALGYSELL 234

Query: 244 DEAREVVSL 252
           D+ R V+++
Sbjct: 235 DDVRVVINI 243


>gi|262376644|ref|ZP_06069872.1| competence lipoprotein comL [Acinetobacter lwoffii SH145]
 gi|262308354|gb|EEY89489.1| competence lipoprotein comL [Acinetobacter lwoffii SH145]
          Length = 321

 Score = 65.5 bits (158), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 116/259 (44%), Gaps = 27/259 (10%)

Query: 17  YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSK 75
           Y++   A+T+  + A   +VG      ++V +D   +   Q  VY +KA   L    ++ 
Sbjct: 6   YKMTMLAVTLGIASA---MVGCSSNPKKEV-VDKGPESSEQ--VYIQKAQKALDRNQYTD 59

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A +        FP +  A ++ L   +V++    Y+ A +L E +I   P+  NVDY YY
Sbjct: 60  AAKQLEALETYFPTSQYAPQAQLELLYVKFQQKDYEGAVALAERFIRLNPQHPNVDYAYY 119

Query: 136 LVGMS--------------YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY-VKGARF 180
           + G+S                Q  RDV Y     K+  Q     + RY +S Y V  A+ 
Sbjct: 120 VRGVSNMEQNYNGLLRYTSLKQSHRDVSY----LKVAYQNFVDFIRRYPSSTYAVDAAQR 175

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
              +G+ +LA  E+   R+ +KR  Y+AA+ R   V+ +Y       EA+A +   Y  L
Sbjct: 176 MQFIGQ-ELAEHEMNAARFNIKRKAYLAAVERGLWVIEHYPQTPQIPEALATVAYGYAQL 234

Query: 241 ALMDEAREVVSLIQERYPQ 259
                +++ V +++  YP 
Sbjct: 235 GDKATSQQYVDVLKLNYPN 253


>gi|78357108|ref|YP_388557.1| putative lipoprotein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78219513|gb|ABB38862.1| putative lipoprotein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 243

 Score = 65.5 bits (158), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 95/201 (47%), Gaps = 9/201 (4%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L++  +++ C ++ +        +L    D    +E++E     ++E++++ A +YF++ 
Sbjct: 12  LSLLATLSGCGIIDY-------FFLPPPEDT--AQELFESGNDAMREKDYASATDYFSKL 62

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
             +FPF+  A ++ L      +   +Y  AA   +E+ T +P  K + YV + +G +  +
Sbjct: 63  KDNFPFSPYAIEAELSLGDAYFLDEEYAMAAEAYKEFETLHPRHKAIPYVLFQIGNANLK 122

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
               +   Q       +Y SR+ E Y  S Y + A   +   R  +A  E+ +  +Y + 
Sbjct: 123 SFVSIDRPQTNVAEAYEYFSRVRESYPGSEYAQKAGELLGECRRLMAEHELFVADFYWRT 182

Query: 204 GEYVAAIPRFQLVLANYSDAE 224
           G++ +A  R+Q V   + D E
Sbjct: 183 GKFRSAASRYQHVAQEFPDVE 203


>gi|264678274|ref|YP_003278181.1| transmembrane protein [Comamonas testosteroni CNB-2]
 gi|262208787|gb|ACY32885.1| putative transmembrane protein [Comamonas testosteroni CNB-2]
          Length = 271

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 91/191 (47%), Gaps = 13/191 (6%)

Query: 73  FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
           + KA   F +         +A+++ L  A+ QY AG+  QA +  + +   +P S  +DY
Sbjct: 58  YDKAVPLFEKLEGRAAGTPLAQQAQLEKAYAQYKAGEKVQALATLDRFTKLHPASPAMDY 117

Query: 133 VYYLVGM--------SYAQMIRD--VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
             YL G+         +  + R      DQ+A K   +    +V R+ +S Y   AR  +
Sbjct: 118 ALYLKGLVNFNDNLGMFGWLTRQDLSERDQKAAKDSFESFRELVTRFPDSKYSDDARQRM 177

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA- 241
               N LA  EV + +YY  RG YVAAI R Q  + +Y +     EAM  LV++Y AL  
Sbjct: 178 QYIVNSLAQYEVHVAKYYYSRGAYVAAIARAQAAIKDYQNVPAVREAMVILVKSYDALGM 237

Query: 242 --LMDEAREVV 250
             L D+A+ V+
Sbjct: 238 TQLRDDAQRVL 248


>gi|299533527|ref|ZP_07046904.1| putative transmembrane protein [Comamonas testosteroni S44]
 gi|298718485|gb|EFI59465.1| putative transmembrane protein [Comamonas testosteroni S44]
          Length = 263

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 91/191 (47%), Gaps = 13/191 (6%)

Query: 73  FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
           + KA   F +         +A+++ L  A+ QY AG+  QA +  + +   +P S  +DY
Sbjct: 50  YDKAVPLFEKLEGRAAGTPLAQQAQLEKAYAQYKAGEKVQALATLDRFTKLHPASPAMDY 109

Query: 133 VYYLVGM--------SYAQMIRD--VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
             YL G+         +  + R      DQ+A K   +    +V R+ +S Y   AR  +
Sbjct: 110 ALYLKGLVNFNDNLGMFGWLTRQDLSERDQKAAKDSFESFRELVTRFPDSKYSDDARQRM 169

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA- 241
               N LA  EV + +YY  RG YVAAI R Q  + +Y +     EAM  LV++Y AL  
Sbjct: 170 QYIVNSLAQYEVHVAKYYYSRGAYVAAIARAQAAIKDYQNVPAVREAMVILVKSYDALGM 229

Query: 242 --LMDEAREVV 250
             L D+A+ V+
Sbjct: 230 TQLRDDAQRVL 240


>gi|153215113|ref|ZP_01949820.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|124114904|gb|EAY33724.1| conserved hypothetical protein [Vibrio cholerae 1587]
          Length = 214

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 10/178 (5%)

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
           +PF   + +  L   +  Y         +  E +    P  + +D+V Y+ G+++    R
Sbjct: 33  YPFGAYSEQVQLDLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDR 92

Query: 147 DVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
           +  +D              K       ++++RY NSPY + A+  +   +N+LA  ++  
Sbjct: 93  NFMHDLFNIDRRDRDPEPVKAAFADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLAT 152

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
             +YL+R  ++AAI R Q +   Y D E A +++A  +EAY  L L D       L+Q
Sbjct: 153 ADFYLRREAWIAAINRTQELQKTYPDTEAARKSLAIQLEAYQQLGLTDAIERTKQLMQ 210


>gi|283786207|ref|YP_003366072.1| lipoprotein [Citrobacter rodentium ICC168]
 gi|282949661|emb|CBG89280.1| putative lipoprotein [Citrobacter rodentium ICC168]
          Length = 245

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/206 (22%), Positives = 89/206 (43%), Gaps = 10/206 (4%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            E+Y  A   L++ N+ +A          +PF   +++  L   +  Y       A +  
Sbjct: 33  NEIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAI 92

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVE 167
           + +I   P   N+DYV Y+ G++   +          +     D +  +      S++V 
Sbjct: 93  DRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVR 152

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y NS Y   A   +   +++LA  E  +  YY KRG +VA + R + +L ++ D +   
Sbjct: 153 GYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTKRGAWVAVVNRVEGMLRDFPDTQATR 212

Query: 228 EAMARLVEAYVALALMDEAREVVSLI 253
           +A+  +  AY  + +  +A +V  +I
Sbjct: 213 DALPLMENAYREMQMTTQAEKVAKII 238


>gi|313672442|ref|YP_004050553.1| outer membrane assembly lipoprotein yfio [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312939198|gb|ADR18390.1| outer membrane assembly lipoprotein YfiO [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 254

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 75/146 (51%), Gaps = 2/146 (1%)

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y+QA    +EY+  YP+S +     Y +G+SY   +  V  D    +L L+  +++ E+Y
Sbjct: 83  YEQAIPSYKEYLNIYPDSPDAKRAMYRLGLSYYNQVDTVDRDLENAELALKTFTQLKEKY 142

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
                       +   +N LA KE+ + ++Y +  E  +AI R + ++ N+ D +   E 
Sbjct: 143 PEFAKENKVDKKIVELKNLLAEKELYVAKFYFRIKEPSSAIKRLEYLVKNFKDTKSYPEG 202

Query: 230 MARLVEAYVALALMDEAREVVSLIQE 255
           +  L E+YV     D+A+EVV+L+ E
Sbjct: 203 LIMLAESYVDKP--DKAQEVVNLLTE 226


>gi|297171549|gb|ADI22547.1| DNA uptake lipoprotein [uncultured Oceanospirillales bacterium
           HF0500_09M11]
          Length = 187

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 75/148 (50%), Gaps = 13/148 (8%)

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRD-----VPYDQRATKL-----MLQYMSRIV 166
            + ++  YP  + +DY  Y+ G++   M R      +  D+ A  L       +   R+V
Sbjct: 4   AQRFMRSYPAHQRLDYALYMRGLANFYMERGFFDSMMNTDKSARDLSSARDAFEDFERLV 63

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
            R+ +S Y + AR  +   RN+ A  E+   RYY +RG Y+AAI R Q V+ +Y      
Sbjct: 64  TRFPDSEYSEDARARMVFIRNEFARHELHAARYYARRGAYIAAIGRAQYVVQHYQQTPLV 123

Query: 227 EEAMARLVEAYVAL---ALMDEAREVVS 251
            EA+A +V+ Y  L   AL D++R +++
Sbjct: 124 PEALAIMVKGYERLDRPALADKSRRILA 151


>gi|269962552|ref|ZP_06176900.1| putative lipoprotein [Vibrio harveyi 1DA3]
 gi|269832747|gb|EEZ86858.1| putative lipoprotein [Vibrio harveyi 1DA3]
          Length = 242

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 89/206 (43%), Gaps = 10/206 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y  A   L+  N+  A E        +PF   + +  L   +  Y         +   
Sbjct: 32  ELYADAQTSLQSGNWLSAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIS 91

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVER 168
            ++   P  + +D+V Y+ G+S+    R+  +D              K       ++++R
Sbjct: 92  RFMRLNPTHEKMDWVLYMRGLSHMAQDRNFMHDLFNVDRSDRDPEPVKKAFDDFKKLLDR 151

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NSPY + ++  +   +N+LA  ++    +YL+R  ++AAI R Q +   + D E A +
Sbjct: 152 YPNSPYAEDSQKRMVALKNRLADYDLATADFYLRREAWIAAINRAQELQKAFPDTEAARK 211

Query: 229 AMARLVEAYVALALMDEAREVVSLIQ 254
           ++   +EAY  L L D       LI+
Sbjct: 212 SLEIQLEAYKQLKLDDSVARTEELIK 237


>gi|94986809|ref|YP_594742.1| DNA uptake lipoprotein [Lawsonia intracellularis PHE/MN1-00]
 gi|94731058|emb|CAJ54421.1| DNA uptake lipoprotein [Lawsonia intracellularis PHE/MN1-00]
          Length = 240

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/171 (23%), Positives = 81/171 (47%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +E+YE A   ++E+++++A EY+ +   ++P +    ++        +   KY +A    
Sbjct: 34  QELYENAKDAMEEKHYAQAAEYYEKLKDNYPLSPYTVEAERALGDALFFDEKYAEAVEAY 93

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           +E+ T +P   ++ YV Y +GMS  +    +     + +   +Y  R+ E + +SPY + 
Sbjct: 94  KEFETLHPRHPDIPYVLYQIGMSNLKTFISIDRPTTSIQEAYEYFQRVQETFPDSPYAEA 153

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           A   +   R  +   E+ I   +   G+Y  A  R+  +L N+SD     E
Sbjct: 154 AVNEMKACRLIMVEHELYIANVFWNMGKYGPAWKRYTFILENFSDVPSVSE 204


>gi|254224982|ref|ZP_04918596.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|125622369|gb|EAZ50689.1| conserved hypothetical protein [Vibrio cholerae V51]
          Length = 253

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 93/216 (43%), Gaps = 11/216 (5%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D V DV    ++Y +A   L+   +  A E        +PF   + +  L   +  Y   
Sbjct: 35  DVVPDVP-PSQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKND 93

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLM 158
                 +  E +    P  + +D+V Y+ G+++    R+  +D              K  
Sbjct: 94  DLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRRDRDPEPVKAA 153

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
                ++++RY NSPY + A+  +   +N+LA  ++    +YL+R  ++AAI R Q +  
Sbjct: 154 FADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLRREAWIAAINRTQELQK 213

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
            Y + E A +++   +EAY  L L D       L+Q
Sbjct: 214 TYPNTEAARKSLEIQLEAYQQLGLTDAIERTKQLMQ 249


>gi|78485715|ref|YP_391640.1| competence lipoprotein ComL [Thiomicrospira crunogena XCL-2]
 gi|78364001|gb|ABB41966.1| conserved hypothetical protein [Thiomicrospira crunogena XCL-2]
          Length = 256

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 11/206 (5%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           ++ Y  A    + + +  A  Y+ +    +P+   A +S L  A+  Y   + + A    
Sbjct: 32  KDFYSHAKDAFESEQWESAIGYYEKLKAYYPYGKYAEQSYLELAYAYYRYDEPESAQREL 91

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVE 167
           EE+I  YP+   + Y YYL  ++ A  I     D   T   ++ M+           ++ 
Sbjct: 92  EEFIRLYPKHAELAYAYYLRALA-ADSINKSWLDSWLTDPAMRDMASTTKAYQAYIDLLN 150

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
           R+ NS Y   +R  + V RN+LA  E ++  YY KR  Y+AA  R + ++ +Y  +    
Sbjct: 151 RFPNSKYAAKSRERLIVLRNRLARHEYQVAEYYFKRQAYLAAANRAKQIIESYPRSMVNM 210

Query: 228 EAMARLVEAYVALALMDEAREVVSLI 253
           +A+  + EAY  L +   A  V S+I
Sbjct: 211 KALGLMKEAYAKLGMTQNADNVQSVI 236


>gi|212702987|ref|ZP_03311115.1| hypothetical protein DESPIG_01025 [Desulfovibrio piger ATCC 29098]
 gi|212673575|gb|EEB34058.1| hypothetical protein DESPIG_01025 [Desulfovibrio piger ATCC 29098]
          Length = 243

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 20/214 (9%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
            AL IF S++ C ++         +YL    D    +E++E     + E+N+ +A E +N
Sbjct: 11  LALAIF-SLSGCGIIDM-------IYLPPAEDT--AQEIFEAGNDAMSEKNYVRAVELYN 60

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
           +    +PF+     + L  A   Y   +Y  AA   +++ + +P  +   YV Y  GMS 
Sbjct: 61  KLRDTYPFSPYTVDAELALADAYYLDEEYVLAAETYKDFESLHPRHEATPYVIYQTGMSL 120

Query: 142 AQMIRDVPYDQRATKLM---LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
            +  R +    RAT ++    +Y +R+ + Y +SPY K A   +   R  +A  E+ I  
Sbjct: 121 MKQFRSI---DRATTILQEAHEYFARLRQVYPDSPYAKDAEEKMHTCRRLMAEHELYIAD 177

Query: 199 YYLKRGEYVAAIPRFQLVLANYSD----AEHAEE 228
            +    +Y  A  R++ V   + D    A HA+E
Sbjct: 178 VFWHMEKYGPAWRRYEYVSETFPDVPEVASHAKE 211


>gi|262373261|ref|ZP_06066540.1| competence lipoprotein comL [Acinetobacter junii SH205]
 gi|262313286|gb|EEY94371.1| competence lipoprotein comL [Acinetobacter junii SH205]
          Length = 365

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 110/252 (43%), Gaps = 24/252 (9%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQ 82
           L +   +A  F VG     S+   +D       Q  VY EKA   L    ++ A +    
Sbjct: 11  LALSLGVASAF-VGCSSNPSKKEVVDKGPQSSEQ--VYFEKAQKSLDRNQYTDAVKSLEA 67

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG---- 138
               +P     +++ L   + ++    Y+   +L E +I   P+  NVDY YY+ G    
Sbjct: 68  LDTYYPTGRYTQQAQLELLYAKFKQKDYEGTIALAERFIRLNPQHPNVDYAYYVRGVANM 127

Query: 139 -MSYAQMIR---------DVPYDQRATKLMLQYMSRIVERYTNSPY-VKGARFYVTVGRN 187
            M+Y  +IR         DV Y     K+  Q    ++ R+ +S Y V  A+    +G+ 
Sbjct: 128 EMNYDSLIRYTSLQQSHRDVSY----VKVAYQNFVDLIRRFPSSKYSVDAAQRMKFIGQ- 182

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
           +LA  E+   R+ ++R  ++AA  R Q V+ +Y       EA+A L  +Y  L     A+
Sbjct: 183 ELAESEMNAARFNIQRKAWLAAAERAQWVIEHYPQTPQTPEALATLAYSYQKLGDNSTAQ 242

Query: 248 EVVSLIQERYPQ 259
           + + +++  YP 
Sbjct: 243 QYIEILKLNYPN 254


>gi|82778019|ref|YP_404368.1| outer membrane protein assembly complex subunit YfiO [Shigella
           dysenteriae Sd197]
 gi|309789451|ref|ZP_07684037.1| conserved hypothetical protein [Shigella dysenteriae 1617]
 gi|81242167|gb|ABB62877.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
 gi|308922694|gb|EFP68215.1| conserved hypothetical protein [Shigella dysenteriae 1617]
          Length = 245

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 10/205 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y  A   L++ N+ +A          +PF   +++  L   +  Y       A +  +
Sbjct: 34  EIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168
            +I   P   N+DYV Y+ G++   +          +     D +  +      S++V  
Sbjct: 94  RFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRG 153

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS Y   A   +   +++LA  E  +  YY +RG +VA + R + +L NY D +   +
Sbjct: 154 YPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRNYPDTQATRD 213

Query: 229 AMARLVEAYVALALMDEAREVVSLI 253
           A+  +  AY  + +  +A +V  +I
Sbjct: 214 ALPLMENAYRQMQMNAQAEKVAKII 238


>gi|312881915|ref|ZP_07741678.1| putative lipoprotein [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309370433|gb|EFP97922.1| putative lipoprotein [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 241

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/225 (22%), Positives = 103/225 (45%), Gaps = 19/225 (8%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           SS+DV    V D+    E+Y  A   L+  N++ A +        +PF   + +  L   
Sbjct: 20  SSKDV----VPDIP-PSELYSDAQSSLQSGNWTNAIKKLEALDSRYPFGAYSEQVQLDLI 74

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY----------- 150
           +  Y   +   +++  + ++   P ++ +D+V Y+ G+++  M +D  +           
Sbjct: 75  YAYYKNDELALSSATIDRFMRLNPTNERLDWVLYMRGLTH--MAQDQNFMHSVFNIDRSD 132

Query: 151 -DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
            D    K       ++++RY +S Y + A+  +   +N+LA  ++    +YL+R  ++AA
Sbjct: 133 RDPEPVKKAFADFKKLLQRYPDSQYAEDAKLRLIALKNRLANYDLATADFYLRREAWIAA 192

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
           I R Q +   Y + E A +++   +EAY  L + +       LIQ
Sbjct: 193 IKRCQEIQKTYPNTEAARQSLPIQLEAYKQLGMQEAIDRTKMLIQ 237


>gi|119775738|ref|YP_928478.1| putative lipoprotein [Shewanella amazonensis SB2B]
 gi|119768238|gb|ABM00809.1| putative lipoprotein [Shewanella amazonensis SB2B]
          Length = 283

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/250 (23%), Positives = 101/250 (40%), Gaps = 13/250 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +YKFA     S    F +     SS     D V   +    +Y +A   ++  NFSKA +
Sbjct: 30  MYKFAKG---SAVALFALALGACSSSGSQEDLVLSQKSPEALYAQARTSMELGNFSKAVK 86

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   FPF     +  L   +  Y      QA +  + ++   P   +VDYV Y+ G
Sbjct: 87  SLEALDSRFPFGAHKTQVQLDMIYAYYKLDDTPQAIANIDRFLRLNPTHPDVDYVQYMRG 146

Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +   Q           I     D +      +   R+++ Y NS Y   A   +   +N+
Sbjct: 147 LVNMQADSYLFHDMMNIDRTDRDPKNAMDAFKDFERLIKTYPNSKYAADAHQRMQFLKNR 206

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA   +++  YY+K   + AA  R Q V+ ++      E A+  + ++Y  L      + 
Sbjct: 207 LARYSIQVAEYYVKMNAWSAAAVRAQTVMESFPGTPSTERALEIMAQSYDELGQEQLKKH 266

Query: 249 VVSLIQERYP 258
           V+ ++QE +P
Sbjct: 267 VLMVMQENFP 276


>gi|186475731|ref|YP_001857201.1| putative competence lipoprotein, ComL [Burkholderia phymatum
           STM815]
 gi|184192190|gb|ACC70155.1| putative competence lipoprotein, ComL [Burkholderia phymatum
           STM815]
          Length = 285

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 14/215 (6%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             ++Y +A   L   +F K  +YF       PF   A+++ +  A+  +   +   A   
Sbjct: 54  NNKLYTEAQDALSGGDFGKCAKYFEALEGRDPFGHFAQQAQINVAYCNWKDSETDAADQA 113

Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164
              +I  +P+  ++ Y YYL GM +             Q + +   D ++ +        
Sbjct: 114 VNRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFSGQDMSE--RDPKSLRESYDAFKV 171

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V++Y  S Y   A   +    N LA+ EV    YY +RG YVAAI R QL +  Y +A 
Sbjct: 172 VVDKYPQSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYKNAP 231

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
             E+A+  ++ +Y  L     A +   ++   +P 
Sbjct: 232 AIEDALHIMMLSYQKLDQPQLAEDTKRVLAGTFPD 266


>gi|300718036|ref|YP_003742839.1| outer membrane assembly lipoprotein [Erwinia billingiae Eb661]
 gi|299063872|emb|CAX60992.1| outer membrane assembly lipoprotein [Erwinia billingiae Eb661]
          Length = 243

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 10/205 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y  A   L++ NF  A          +PF   +++  L   +  Y       A +  +
Sbjct: 34  EIYATAQQKLQDGNFKGAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168
            ++   P   N+DYV Y+ G++   +          I     D    +      S+++  
Sbjct: 94  RFMRLNPTHPNIDYVIYMRGLTDMALDDSALQGFFGIDRSDRDPTHARDAFHDFSQLLRG 153

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS Y   AR  +   +++LA  E+ + ++Y KR  YVA + R + ++ +Y D +    
Sbjct: 154 YPNSQYATDARKRLVYLKDRLAKYELSVAQFYTKREAYVAVVNRVEQMMKDYPDTQATRT 213

Query: 229 AMARLVEAYVALALMDEAREVVSLI 253
           A+  +  AY  L L  EA +V  LI
Sbjct: 214 ALPLMENAYRQLQLNAEADKVAKLI 238


>gi|84393595|ref|ZP_00992348.1| DNA uptake lipoprotein [Vibrio splendidus 12B01]
 gi|84375804|gb|EAP92698.1| DNA uptake lipoprotein [Vibrio splendidus 12B01]
          Length = 242

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 103/241 (42%), Gaps = 17/241 (7%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           LT+   +AV  LVG    S+ ++  D    V     +Y  A   L+  ++  A E     
Sbjct: 4   LTLSGLLAVSLLVGC--SSTEEIVPDVPPSV-----LYSDAQESLQSGSWLSAIEKLEAL 56

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +PF   + +  L   +  Y         +    ++   P  +  D+V Y+ G+++  
Sbjct: 57  DSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATISRFLRLNPTHEKQDWVLYMRGLTHMA 116

Query: 144 MIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
             R+  +D              KL      R++ER+ +SPY + A+  +   +N+LA  +
Sbjct: 117 QDRNFMHDIFNIDRSDRDPEPVKLAFADFKRLLERFPSSPYAEDAQKRMFALKNRLAEYD 176

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +    +YL+R  ++AA+ R Q +   Y D   A +++   +EAY  L L D A     LI
Sbjct: 177 LATADFYLRREAWIAAVNRTQELQKTYPDTIAARKSLDIQLEAYKQLGLEDAASRTEKLI 236

Query: 254 Q 254
           +
Sbjct: 237 E 237


>gi|325294284|ref|YP_004280798.1| outer membrane assembly lipoprotein YfiO [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325064732|gb|ADY72739.1| outer membrane assembly lipoprotein YfiO [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 316

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 62/120 (51%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           ++   ++ AA   EE++  YP S       + +G+SY  +++   +DQ  TK  ++   +
Sbjct: 72  FNDQDFENAALNYEEFLDLYPASPRAKDALFRLGISYLNLVKGPQWDQTFTKKAIRAFEK 131

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
            V+ + N P V+ A+ Y  + R  LA  EV IG  Y    ++ A+I R+++V   Y D E
Sbjct: 132 FVKEFPNDPRVEKAKIYKNIARKILAENEVYIGGTYDMLHKFTASINRYKIVKEKYRDVE 191


>gi|113971329|ref|YP_735122.1| putative lipoprotein [Shewanella sp. MR-4]
 gi|114048566|ref|YP_739116.1| putative lipoprotein [Shewanella sp. MR-7]
 gi|113886013|gb|ABI40065.1| putative lipoprotein [Shewanella sp. MR-4]
 gi|113890008|gb|ABI44059.1| putative lipoprotein [Shewanella sp. MR-7]
          Length = 282

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 10/211 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y +A   ++  N+SKA          FPF     +  L   +  Y         +  + 
Sbjct: 67  LYSQARTSMELGNYSKAVRSLEALDSRFPFGPHKTQVQLDLIYAYYKMDDVASGIANIDR 126

Query: 120 YITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERY 169
           +I   P   ++DYVYY+ G+   Q           I     D +  +   +   R+++ Y
Sbjct: 127 FIRLNPTHPDIDYVYYMRGLVNMQADSYLFHDMLNIDRTDRDPKNAQDAFKDFDRLIKTY 186

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
            NS Y   A+  +   +N+LA   +++  YYLK   + AA  R Q VL  Y      E A
Sbjct: 187 PNSKYAADAQKRMLSLKNRLAKYSIQVAEYYLKMNAWSAAAVRAQSVLETYPGTPSTERA 246

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260
           +  + EAY  L      + V+ ++Q  +P  
Sbjct: 247 LEIMAEAYGELGQNQLKQNVLMVMQANFPNN 277


>gi|322614487|gb|EFY11418.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315996572]
 gi|322621448|gb|EFY18301.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-1]
 gi|322624309|gb|EFY21142.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-3]
 gi|322629392|gb|EFY26170.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-4]
 gi|322633632|gb|EFY30374.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-1]
 gi|322638325|gb|EFY35023.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-2]
 gi|322639763|gb|EFY36446.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str. 531954]
 gi|322647375|gb|EFY43871.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322650455|gb|EFY46865.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           OH_2009072675]
 gi|322661446|gb|EFY57671.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str. 19N]
 gi|322662646|gb|EFY58854.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           81038-01]
 gi|322667019|gb|EFY63194.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MD_MDA09249507]
 gi|322671388|gb|EFY67511.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str. 414877]
 gi|322677605|gb|EFY73668.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str. 366867]
 gi|322681569|gb|EFY77599.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str. 413180]
 gi|322683969|gb|EFY79979.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str. 446600]
 gi|323195538|gb|EFZ80716.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           609458-1]
 gi|323197911|gb|EFZ83034.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           556150-1]
 gi|323203089|gb|EFZ88121.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str. 609460]
 gi|323205330|gb|EFZ90305.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           507440-20]
 gi|323210520|gb|EFZ95404.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str. 556152]
 gi|323218199|gb|EGA02911.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB101509-0077]
 gi|323221535|gb|EGA05948.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB102109-0047]
 gi|323223755|gb|EGA08060.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB110209-0055]
 gi|323230962|gb|EGA15080.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB111609-0052]
 gi|323234686|gb|EGA18772.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009083312]
 gi|323238725|gb|EGA22775.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009085258]
 gi|323241424|gb|EGA25455.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315731156]
 gi|323246878|gb|EGA30845.1| outer membrane biogenesis protein BamD [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323253277|gb|EGA37107.1| outer membrane biogenesis protein BamD [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323257073|gb|EGA40782.1| outer membrane biogenesis protein BamD [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323260454|gb|EGA44065.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008284]
 gi|323264489|gb|EGA47995.1| outer membrane biogenesis protein BamD [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323269624|gb|EGA53077.1| outer membrane biogenesis protein BamD [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
          Length = 245

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 88/206 (42%), Gaps = 10/206 (4%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            E+Y  A   L++ N+ +A          +PF   +++  L   +  Y       A +  
Sbjct: 33  NEIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAI 92

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVE 167
           + ++   P   N+DYV Y+ G++   +          +     D +  +      S++V 
Sbjct: 93  DRFMRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVR 152

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y NS Y   A   +   +++LA  E  +  YY  RG +VA + R + +L NY D +   
Sbjct: 153 SYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATR 212

Query: 228 EAMARLVEAYVALALMDEAREVVSLI 253
           +A+  +  AY  + L  +A +V  +I
Sbjct: 213 DALPLMENAYRQMQLNAQADKVAKII 238


>gi|322656052|gb|EFY52352.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
          Length = 245

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 88/206 (42%), Gaps = 10/206 (4%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            E+Y  A   L++ N+ +A          +PF   +++  L   +  Y       A +  
Sbjct: 33  NEIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAI 92

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVE 167
           + ++   P   N+DYV Y+ G++   +          +     D +  +      S++V 
Sbjct: 93  DRFMRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVR 152

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y NS Y   A   +   +++LA  E  +  YY  RG +VA + R + +L NY D +   
Sbjct: 153 SYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATR 212

Query: 228 EAMARLVEAYVALALMDEAREVVSLI 253
           +A+  +  AY  + L  +A +V  +I
Sbjct: 213 DALPLMENAYRQMQLNAQADKVAKII 238


>gi|114561851|ref|YP_749364.1| putative lipoprotein [Shewanella frigidimarina NCIMB 400]
 gi|114333144|gb|ABI70526.1| putative lipoprotein [Shewanella frigidimarina NCIMB 400]
          Length = 253

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 103/252 (40%), Gaps = 17/252 (6%)

Query: 17  YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
           Y++ K A  +  S+A+            DV   +  DV     +Y +A   ++  N+SKA
Sbjct: 2   YKIAKGAALVLLSLAITACSSSPEDD--DVASKASPDV-----LYSQARTSMELGNYSKA 54

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
                     FPF     +  L   F  Y         +  + ++   P   N+DYVYY+
Sbjct: 55  VRSLEALDSRFPFGPHKTQVQLDLIFAYYKMDDAASGLANIDRFLRLNPTHPNIDYVYYM 114

Query: 137 VGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
            G++  Q           I     D +  +   +   R+++ Y NS Y   A+  +   +
Sbjct: 115 RGLTNMQADNYLFHDLMNIDRTDRDPKNAQDAFKDFDRLIKSYPNSKYSADAQQRMQFLK 174

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
           N+LA   +++  YY+K   + AA  R Q V+  +      E A+  +V+AY  L      
Sbjct: 175 NRLAKYSIQVAEYYIKMNAWSAAAVRAQSVMEKFPGTPSTERALEIMVKAYGELGQEKLQ 234

Query: 247 REVVSLIQERYP 258
           + V ++++  +P
Sbjct: 235 QNVKTVMKANFP 246


>gi|16765979|ref|NP_461594.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|56414630|ref|YP_151705.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Paratyphi A str. ATCC
           9150]
 gi|161502238|ref|YP_001569350.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. arizonae serovar 62:z4,z23:-- str.
           RSK2980]
 gi|161615593|ref|YP_001589558.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Paratyphi B str. SPB7]
 gi|167553893|ref|ZP_02347636.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
 gi|167992441|ref|ZP_02573539.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168234183|ref|ZP_02659241.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|168244684|ref|ZP_02669616.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
 gi|168262166|ref|ZP_02684139.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|168464165|ref|ZP_02698082.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Newport str. SL317]
 gi|168822473|ref|ZP_02834473.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|194444235|ref|YP_002041927.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194448106|ref|YP_002046669.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194472505|ref|ZP_03078489.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Kentucky str. CVM29188]
 gi|197248037|ref|YP_002147566.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|197263157|ref|ZP_03163231.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|197363557|ref|YP_002143194.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Paratyphi A str.
           AKU_12601]
 gi|198241761|ref|YP_002216674.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|200388577|ref|ZP_03215189.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
 gi|204929736|ref|ZP_03220810.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|205353702|ref|YP_002227503.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|207858013|ref|YP_002244664.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|224584516|ref|YP_002638314.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
 gi|16421210|gb|AAL21553.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|56128887|gb|AAV78393.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|160863585|gb|ABX20208.1| hypothetical protein SARI_00263 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
 gi|161364957|gb|ABX68725.1| hypothetical protein SPAB_03374 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194402898|gb|ACF63120.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194406410|gb|ACF66629.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|194458869|gb|EDX47708.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Kentucky str. CVM29188]
 gi|195633350|gb|EDX51764.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Newport str. SL317]
 gi|197095034|emb|CAR60580.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|197211740|gb|ACH49137.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|197241412|gb|EDY24032.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|197936277|gb|ACH73610.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|199605675|gb|EDZ04220.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
 gi|204321455|gb|EDZ06655.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|205273483|emb|CAR38460.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|205321763|gb|EDZ09602.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
 gi|205329289|gb|EDZ16053.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205331816|gb|EDZ18580.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|205336453|gb|EDZ23217.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
 gi|205341181|gb|EDZ27945.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|205349291|gb|EDZ35922.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|206709816|emb|CAR34168.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|224469043|gb|ACN46873.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|261247857|emb|CBG25686.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
           Typhimurium str. D23580]
 gi|267994804|gb|ACY89689.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           14028S]
 gi|301159210|emb|CBW18725.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
           Typhimurium str. SL1344]
 gi|312913653|dbj|BAJ37627.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           T000240]
 gi|320087096|emb|CBY96864.1| UPF0169 lipoprotein CC_1984 Flags: Precursor [Salmonella enterica
           subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321223455|gb|EFX48520.1| putative component of the lipoprotein assembly complex forms a
           complex with YaeT, YfgL, and NlpB [Salmonella enterica
           subsp. enterica serovar Typhimurium str. TN061786]
 gi|323130997|gb|ADX18427.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Typhimurium str. 4/74]
 gi|326624430|gb|EGE30775.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Dublin str. 3246]
 gi|326628808|gb|EGE35151.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 9]
 gi|332989588|gb|AEF08571.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Typhimurium str. UK-1]
          Length = 245

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 88/206 (42%), Gaps = 10/206 (4%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            E+Y  A   L++ N+ +A          +PF   +++  L   +  Y       A +  
Sbjct: 33  NEIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAI 92

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVE 167
           + ++   P   N+DYV Y+ G++   +          +     D +  +      S++V 
Sbjct: 93  DRFMRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVR 152

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y NS Y   A   +   +++LA  E  +  YY  RG +VA + R + +L NY D +   
Sbjct: 153 SYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATR 212

Query: 228 EAMARLVEAYVALALMDEAREVVSLI 253
           +A+  +  AY  + L  +A +V  +I
Sbjct: 213 DALPLMENAYRQMQLNAQADKVAKII 238


>gi|320182490|gb|EFW57384.1| outer membrane protein assembly complex subunit YfiO [Shigella
           boydii ATCC 9905]
          Length = 245

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 90/205 (43%), Gaps = 10/205 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y  A   L++ N+ +A          +PF   +++  L   +  Y       A +  +
Sbjct: 34  EIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168
            +I   P   N+DYV Y+ G++   +          +     D +  +      S++V  
Sbjct: 94  RFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRG 153

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS Y   A   +   +++LA  E  +  YY +RG +VA + R + +L +YSD +   +
Sbjct: 154 YPNSQYTTDAAKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYSDTQATRD 213

Query: 229 AMARLVEAYVALALMDEAREVVSLI 253
           A+  +  AY  + +  +A +V  +I
Sbjct: 214 ALPLMENAYRQMQINAQAEKVAKII 238


>gi|62181236|ref|YP_217653.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|62128869|gb|AAX66572.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|322715722|gb|EFZ07293.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Choleraesuis str. A50]
          Length = 245

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 88/206 (42%), Gaps = 10/206 (4%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            E+Y  A   L++ N+ +A          +PF   +++  L   +  Y       A +  
Sbjct: 33  NEIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAI 92

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVE 167
           + ++   P   N+DYV Y+ G++   +          +     D +  +      S++V 
Sbjct: 93  DRFMRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVR 152

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y NS Y   A   +   +++LA  E  +  YY  RG +VA + R + +L NY D +   
Sbjct: 153 SYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATR 212

Query: 228 EAMARLVEAYVALALMDEAREVVSLI 253
           +A+  +  AY  + L  +A +V  +I
Sbjct: 213 DALPLMENAYRQMQLNAQADKVAKII 238


>gi|293411986|ref|ZP_06654709.1| conserved hypothetical protein [Escherichia coli B354]
 gi|331664162|ref|ZP_08365071.1| putative lipoprotein [Escherichia coli TA143]
 gi|291468757|gb|EFF11248.1| conserved hypothetical protein [Escherichia coli B354]
 gi|331058619|gb|EGI30597.1| putative lipoprotein [Escherichia coli TA143]
          Length = 245

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/205 (22%), Positives = 90/205 (43%), Gaps = 10/205 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y  A   L++ N+ +A          +PF   +++  L   +  Y       A +  +
Sbjct: 34  EIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168
            +I   P   N+DYV Y+ G++   +          +     D +  +      S++V  
Sbjct: 94  RFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRG 153

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS Y   A   +   +++LA  E  + +YY +RG +VA + R + +L +Y D +   +
Sbjct: 154 YPNSQYTTDATKRLVFLKDRLAKYEYSVAKYYTERGAWVAVVNRVEGMLRDYPDTQATRD 213

Query: 229 AMARLVEAYVALALMDEAREVVSLI 253
           A+  +  AY  + +  +A +V  +I
Sbjct: 214 ALPLMENAYRQMQMNAQAEKVAKII 238


>gi|222034299|emb|CAP77040.1| UPF0169 lipoprotein yfiO [Escherichia coli LF82]
          Length = 245

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/205 (22%), Positives = 90/205 (43%), Gaps = 10/205 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y  A   L++ N+ +A          +PF   +++  L   +  Y       A ++ +
Sbjct: 34  EIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAVID 93

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168
            +I   P   N+DYV Y+ G++   +          +     D +  +      S++V  
Sbjct: 94  RFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRG 153

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS Y   A   +   +++LA  E  +  YY +RG +VA + R + +L +Y D +   +
Sbjct: 154 YPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRD 213

Query: 229 AMARLVEAYVALALMDEAREVVSLI 253
           A+  +  AY  + +  +A +V  +I
Sbjct: 214 ALPLMENAYRQMQMNAQAEKVAKII 238


>gi|323159116|gb|EFZ45109.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E128010]
          Length = 245

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/205 (22%), Positives = 89/205 (43%), Gaps = 10/205 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y  A   L++ N+ +A          +PF   +++  L   +  Y       A +  +
Sbjct: 34  EIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168
            +I   P   N+DYV Y+ G++   +          +     D +  +      S++V  
Sbjct: 94  RFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRG 153

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS Y   A   +   +++LA  E  +  YY +RG +VA + R + +L +Y D +   +
Sbjct: 154 YPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGILRDYPDTQATRD 213

Query: 229 AMARLVEAYVALALMDEAREVVSLI 253
           A+  +  AY  + +  +A +V  +I
Sbjct: 214 ALPLMENAYRQMQMNAQAEKVAKII 238


>gi|331684251|ref|ZP_08384843.1| putative lipoprotein [Escherichia coli H299]
 gi|331077866|gb|EGI49072.1| putative lipoprotein [Escherichia coli H299]
          Length = 245

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 10/205 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y  A   L++ N+ +A          +PF   +++  L   +  Y       A +  +
Sbjct: 34  EIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168
            +I   P   N+DYV Y+ G++   +          +     D +  +      S++V  
Sbjct: 94  RFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRG 153

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS Y   A   +   +++LA  E  +  YY +RG +VA + R + +L +Y D +   +
Sbjct: 154 YPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRD 213

Query: 229 AMARLVEAYVALALMDEAREVVSLI 253
           A+  +  AY  + L  +A +V  +I
Sbjct: 214 ALPLMENAYRQMQLNAQAEKVAKII 238


>gi|126173260|ref|YP_001049409.1| putative lipoprotein [Shewanella baltica OS155]
 gi|152999619|ref|YP_001365300.1| putative lipoprotein [Shewanella baltica OS185]
 gi|160874238|ref|YP_001553554.1| putative lipoprotein [Shewanella baltica OS195]
 gi|217974429|ref|YP_002359180.1| outer membrane assembly lipoprotein YfiO [Shewanella baltica OS223]
 gi|304410383|ref|ZP_07392001.1| outer membrane assembly lipoprotein YfiO [Shewanella baltica OS183]
 gi|307304475|ref|ZP_07584225.1| outer membrane assembly lipoprotein YfiO [Shewanella baltica BA175]
 gi|125996465|gb|ABN60540.1| putative lipoprotein [Shewanella baltica OS155]
 gi|151364237|gb|ABS07237.1| putative lipoprotein [Shewanella baltica OS185]
 gi|160859760|gb|ABX48294.1| putative lipoprotein [Shewanella baltica OS195]
 gi|217499564|gb|ACK47757.1| outer membrane assembly lipoprotein YfiO [Shewanella baltica OS223]
 gi|304350867|gb|EFM15267.1| outer membrane assembly lipoprotein YfiO [Shewanella baltica OS183]
 gi|306911877|gb|EFN42301.1| outer membrane assembly lipoprotein YfiO [Shewanella baltica BA175]
 gi|315266472|gb|ADT93325.1| outer membrane assembly lipoprotein YfiO [Shewanella baltica OS678]
          Length = 253

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 87/211 (41%), Gaps = 10/211 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y +A   ++  N+SKA          FPF     +  L   +  Y         +  + 
Sbjct: 38  LYTQARTSMELGNYSKAVRSLEALDSRFPFGPHKTQVQLDLIYAYYKMDDVASGIANIDR 97

Query: 120 YITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERY 169
           +I   P   ++DYV+Y+ G+   Q           I     D +  +   +   R+++ Y
Sbjct: 98  FIRLNPTHPDIDYVFYMRGLVNMQADNYLFHDMLNIDRTDRDPKNAQDAFKDFDRLIKTY 157

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
            NS Y   A+  +   +N+LA   +++  YYLK   + AA  R Q V+  Y      E A
Sbjct: 158 PNSKYAADAQKRMLALKNRLARYSIQVAEYYLKMNAWSAAAIRAQSVMETYPGTPSNERA 217

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260
           +  ++EAY  L      + V+ ++Q  YP  
Sbjct: 218 LEIMIEAYGELGQSKLKQNVLMVMQANYPNN 248


>gi|27363949|ref|NP_759477.1| putative component of the lipoprotein assembly complex [Vibrio
           vulnificus CMCP6]
 gi|37678896|ref|NP_933505.1| putative lipoprotein [Vibrio vulnificus YJ016]
 gi|27360066|gb|AAO09004.1| Probable component of the lipoprotein assembly complex (forms a
           complex with YaeT, YfgL, and NlpB) [Vibrio vulnificus
           CMCP6]
 gi|37197637|dbj|BAC93476.1| putative lipoprotein [Vibrio vulnificus YJ016]
          Length = 241

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 10/206 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y +A   L+  N+  A E        +PF   + +  L   +  Y         +   
Sbjct: 32  ELYAEAQTSLQGGNWLTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIS 91

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVER 168
            +    P  + +D+V Y+ G+++    R+  +D              K       +++ER
Sbjct: 92  RFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRSDRDPEPVKQAFDDFKKLLER 151

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NSPY + ++  +   +N+LA  ++    YYL+R  ++AAI R Q +   Y D   A +
Sbjct: 152 YPNSPYAEDSQKRMFALKNRLAEYDLATADYYLRREAWIAAINRSQELQKTYPDTIAARK 211

Query: 229 AMARLVEAYVALALMDEAREVVSLIQ 254
           ++   +EAY  L L D       LI+
Sbjct: 212 SLKIQLEAYKQLGLQDAIARTEELIR 237


>gi|260771110|ref|ZP_05880037.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio furnissii CIP
           102972]
 gi|260613707|gb|EEX38899.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio furnissii CIP
           102972]
 gi|315179285|gb|ADT86199.1| hypothetical protein vfu_A01006 [Vibrio furnissii NCTC 11218]
          Length = 241

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 90/206 (43%), Gaps = 10/206 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L+  N+  A E        +PF   + +  L   +  Y         +  E
Sbjct: 32  QLYTEAQTSLQGGNWMTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIE 91

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVER 168
            ++   P  + +D+V Y+ G+S+    R+  +D              K       R+++R
Sbjct: 92  RFMRLNPTHEKMDWVLYMRGLSHMAQDRNFMHDLFNVDRSDRDPEPVKAAFADFKRLLQR 151

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS Y + A+  +   +N+LA  ++    +YL+R  ++AAI R Q +   Y D E A +
Sbjct: 152 YPNSSYAEDAQRRMFALKNRLADYDLATADFYLRREAWIAAINRTQELQKTYPDTEAARK 211

Query: 229 AMARLVEAYVALALMDEAREVVSLIQ 254
           ++   ++AY  L L D       L++
Sbjct: 212 SLKIQLQAYKELGLKDSIARTQQLME 237


>gi|193076603|gb|ABO11274.2| putative competence protein (ComL) [Acinetobacter baumannii ATCC
           17978]
          Length = 385

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 22/250 (8%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L +   +A  F VG     S+   +D+      Q   ++KA   L    +  A +     
Sbjct: 11  LALSLGVASAF-VGCSSNPSKKEVVDTGPQSSEQ-AYFDKAQKALDRGQYLDATKSLEAI 68

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +P    A+++ L   + ++    Y+ A +L E +I   P+  NVDY YY+ G+S  +
Sbjct: 69  DTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYVRGVSNME 128

Query: 144 MI--------------RDVPYDQRATKLMLQYMSRIVERYTNSPY-VKGARFYVTVGRNQ 188
           M               RDV Y     K+  Q    ++ R+ +S Y V  A+    +G+ +
Sbjct: 129 MNYDSLLRYTSLQQSHRDVSY----LKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQ-E 183

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E+   R+ +KR  ++AA  R Q V+ +Y       EA+A L  +Y  L     +++
Sbjct: 184 LAESEMNAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYDQLGDKATSQQ 243

Query: 249 VVSLIQERYP 258
            + +++  YP
Sbjct: 244 YIEVLKLNYP 253


>gi|262273644|ref|ZP_06051457.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Grimontia hollisae CIP
           101886]
 gi|262222059|gb|EEY73371.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Grimontia hollisae CIP
           101886]
          Length = 243

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/206 (21%), Positives = 93/206 (45%), Gaps = 10/206 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y++A + L E N++ A +        +PF   + +  L   +  Y         +  +
Sbjct: 32  ELYQEAQVSLNEGNWNTAIQKLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGEATID 91

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVER 168
            +I   P    +D+V Y+ G++     R + +D              +       R+++R
Sbjct: 92  RFIRMNPGHPEMDWVLYMRGLTNMAQDRSLVHDLLSMEREDRDPEPVRRAFVDFRRLLDR 151

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y +S Y   A   +   +N+LA  E+    +Y++R  +VA I R Q +  ++ D   A+ 
Sbjct: 152 YPDSDYAADAAKRLVALKNRLADYELATADFYVRREAWVAVINRCQQIQRDFPDTNAAKR 211

Query: 229 AMARLVEAYVALALMDEAREVVSLIQ 254
           ++  +++AY AL L + A+ +  L++
Sbjct: 212 SLPMMLKAYEALKLEEPAQRIRELMK 237


>gi|169796975|ref|YP_001714768.1| putative competence protein (ComL) [Acinetobacter baumannii AYE]
 gi|213156620|ref|YP_002318281.1| putative competence protein [Acinetobacter baumannii AB0057]
 gi|215484436|ref|YP_002326669.1| Competence lipoprotein comL precursor [Acinetobacter baumannii
           AB307-0294]
 gi|260555734|ref|ZP_05827954.1| competence lipoprotein comL [Acinetobacter baumannii ATCC 19606]
 gi|301346836|ref|ZP_07227577.1| DNA uptake lipoprotein [Acinetobacter baumannii AB056]
 gi|301511994|ref|ZP_07237231.1| DNA uptake lipoprotein [Acinetobacter baumannii AB058]
 gi|301594460|ref|ZP_07239468.1| DNA uptake lipoprotein [Acinetobacter baumannii AB059]
 gi|169149902|emb|CAM87795.1| putative competence protein (ComL) [Acinetobacter baumannii AYE]
 gi|213055780|gb|ACJ40682.1| putative competence protein [Acinetobacter baumannii AB0057]
 gi|213986423|gb|ACJ56722.1| Competence lipoprotein comL precursor [Acinetobacter baumannii
           AB307-0294]
 gi|260410645|gb|EEX03943.1| competence lipoprotein comL [Acinetobacter baumannii ATCC 19606]
          Length = 385

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 22/250 (8%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L +   +A  F VG     S+   +D+      Q   ++KA   L    +  A +     
Sbjct: 11  LALSLGVASAF-VGCSSNPSKKEVVDTGPQSSEQ-AYFDKAQKALDRGQYLDATKSLEAI 68

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +P    A+++ L   + ++    Y+ A +L E +I   P+  NVDY YY+ G+S  +
Sbjct: 69  DTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYVRGVSNME 128

Query: 144 MI--------------RDVPYDQRATKLMLQYMSRIVERYTNSPY-VKGARFYVTVGRNQ 188
           M               RDV Y     K+  Q    ++ R+ +S Y V  A+    +G+ +
Sbjct: 129 MNYDSLLRYTSLQQSHRDVSY----LKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQ-E 183

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E+   R+ +KR  ++AA  R Q V+ +Y       EA+A L  +Y  L     +++
Sbjct: 184 LAESEMNAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYDQLGDKATSQQ 243

Query: 249 VVSLIQERYP 258
            + +++  YP
Sbjct: 244 YIEVLKLNYP 253


>gi|262401595|ref|ZP_06078161.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio sp. RC586]
 gi|262352012|gb|EEZ01142.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio sp. RC586]
          Length = 240

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 90/206 (43%), Gaps = 10/206 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y +A   L+  ++  A E        +PF   + +  L   +  Y         +  E
Sbjct: 32  ELYSEAQTALQSGSWLTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIE 91

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVER 168
            +    P  + +D+V Y+ G+++    R+  +D              K       ++++R
Sbjct: 92  RFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNVDRSDRDPEPVKSAFADFKKLLQR 151

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NSPY + A+  +   +N+LA  ++    +YL+R  ++AAI R Q +   Y D E A +
Sbjct: 152 YPNSPYAEDAQRRMYALKNRLAEYDLATADFYLRREAWIAAINRTQELQKTYPDTEAARK 211

Query: 229 AMARLVEAYVALALMDEAREVVSLIQ 254
           A+   +EAY  L + +       L++
Sbjct: 212 ALDIQLEAYQQLGMTEAVERTKQLMK 237


>gi|169634098|ref|YP_001707834.1| putative competence protein (ComL) [Acinetobacter baumannii SDF]
 gi|169152890|emb|CAP01928.1| putative competence protein (ComL) [Acinetobacter baumannii]
          Length = 385

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 22/250 (8%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L +   +A  F VG     S+   +D+      Q   ++KA   L    +  A +     
Sbjct: 11  LALSLGVASAF-VGCSSNPSKKEVVDTGPQSSEQ-AYFDKAQKALDRGQYLDATKSLEAI 68

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +P    A+++ L   + ++    Y+ A +L E +I   P+  NVDY YY+ G+S  +
Sbjct: 69  DTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYVRGVSNME 128

Query: 144 MI--------------RDVPYDQRATKLMLQYMSRIVERYTNSPY-VKGARFYVTVGRNQ 188
           M               RDV Y     K+  Q    ++ R+ +S Y V  A+    +G+ +
Sbjct: 129 MNYDSLLRYTSLQQSHRDVSY----LKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQ-E 183

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E+   R+ +KR  ++AA  R Q V+ +Y       EA+A L  +Y  L     +++
Sbjct: 184 LAESEMNAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYDQLGDKATSQQ 243

Query: 249 VVSLIQERYP 258
            + +++  YP
Sbjct: 244 YIEVLKLNYP 253


>gi|53804664|ref|YP_113450.1| competence lipoprotein ComL [Methylococcus capsulatus str. Bath]
 gi|53758425|gb|AAU92716.1| competence lipoprotein ComL [Methylococcus capsulatus str. Bath]
          Length = 286

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 99/212 (46%), Gaps = 10/212 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           + Y +A   + + ++ KA + + +    +PF   A ++ +  AF  Y   + + A +  +
Sbjct: 51  QFYAEAKHAMMDGSYDKAIKLYEKLEARYPFGDYATQAQIDVAFCYYKNNEPESAIAAVD 110

Query: 119 EYITQYPESKNVDYVYYLVGM-SYAQMI----RDVPYD--QR---ATKLMLQYMSRIVER 168
            +I   P   +VDY YYL G+ +Y + I    R +P D  QR   + +        ++ +
Sbjct: 111 RFIKLNPTEPHVDYAYYLRGLINYNRGIGFIDRWLPTDSSQRDPGSARDAYNDFETLLNK 170

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           + NS Y + AR      RN LA  ++ +  YY++R  YVAAI R   V+  Y   +    
Sbjct: 171 FPNSVYREDARQRAIALRNNLAMYDIHVADYYMRRRAYVAAIRRSAEVVQKYQRTQAIPH 230

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           A+  + +AY  L +   A ++  +    Y +G
Sbjct: 231 ALRIMEDAYRQLDMPQMADDIARVYALNYAEG 262


>gi|297569607|ref|YP_003690951.1| outer membrane assembly lipoprotein YfiO [Desulfurivibrio
           alkaliphilus AHT2]
 gi|296925522|gb|ADH86332.1| outer membrane assembly lipoprotein YfiO [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 268

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/228 (22%), Positives = 98/228 (42%), Gaps = 18/228 (7%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
           +RD   ++  D R    +  + +    +  + +A E F      +PF+ V   + L +A 
Sbjct: 35  NRDQSPEAEQDPRAPELLAMEGMEKFNQARYRQALEIFKDLKERYPFSSVGVLAELKAAD 94

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y   +Y +A  L +E+   +P ++ + YV + +GM + Q I  +  D       +   
Sbjct: 95  ATYYLRRYDEALPLYQEFENNHPTNEAIPYVMFQIGMCHYQRIGTIDRDPAHALNAIAAF 154

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
           +R+   + +SPY K A       R+ +A  E+ I  +YL   +Y                
Sbjct: 155 TRLNRAFPDSPYRKEAEARTMAARDFMARHEMFIAGFYLNTKKY---------------- 198

Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQE-RYPQGYWARYVETL 269
            + AE  +A L++ Y    L+ EA EV++ ++    P+  W  +V  L
Sbjct: 199 -DQAERRLAYLIDNYPESELIPEAEEVLAALEAGNPPRRNWRDFVPDL 245


>gi|332855565|ref|ZP_08435939.1| outer membrane assembly lipoprotein YfiO [Acinetobacter baumannii
           6013150]
 gi|332868376|ref|ZP_08438122.1| outer membrane assembly lipoprotein YfiO [Acinetobacter baumannii
           6013113]
 gi|332727389|gb|EGJ58822.1| outer membrane assembly lipoprotein YfiO [Acinetobacter baumannii
           6013150]
 gi|332733435|gb|EGJ64616.1| outer membrane assembly lipoprotein YfiO [Acinetobacter baumannii
           6013113]
          Length = 376

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 22/250 (8%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L +   +A  F VG     S+   +D+      Q   ++KA   L    +  A +     
Sbjct: 2   LALSLGVASAF-VGCSSNPSKKEVVDTGPQSSEQ-AYFDKAQKALDRGQYLDATKSLEAI 59

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +P    A+++ L   + ++    Y+ A +L E +I   P+  NVDY YY+ G+S  +
Sbjct: 60  DTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYVRGVSNME 119

Query: 144 MI--------------RDVPYDQRATKLMLQYMSRIVERYTNSPY-VKGARFYVTVGRNQ 188
           M               RDV Y     K+  Q    ++ R+ +S Y V  A+    +G+ +
Sbjct: 120 MNYDSLLRYTSLQQSHRDVSY----LKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQ-E 174

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E+   R+ +KR  ++AA  R Q V+ +Y       EA+A L  +Y  L     +++
Sbjct: 175 LAESEMNAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYDQLGDKATSQQ 234

Query: 249 VVSLIQERYP 258
            + +++  YP
Sbjct: 235 YIEVLKLNYP 244


>gi|127513879|ref|YP_001095076.1| putative lipoprotein [Shewanella loihica PV-4]
 gi|126639174|gb|ABO24817.1| putative lipoprotein [Shewanella loihica PV-4]
          Length = 252

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 88/211 (41%), Gaps = 10/211 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y +A   ++  N+SKA          +PF     +  L   +  Y         +  + 
Sbjct: 38  LYSQARTSMELGNYSKAVRSLEALDSRYPFGPHKTQVQLDLIYAYYKLDDSASGIANIDR 97

Query: 120 YITQYPESKNVDYVYYLVGMSYAQ----MIRDV------PYDQRATKLMLQYMSRIVERY 169
           +I   P  K++DYVYY+ G+   Q    M  D+        D +A +   +   R++++Y
Sbjct: 98  FIRLNPTHKDIDYVYYMRGLVNMQSDNYMFHDMLNIDRTDRDPKAAQDAFKDFDRLIKQY 157

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
            NS Y   A+  +   +N+LA   + +  YY+K   + AA  R Q VL  Y      E A
Sbjct: 158 PNSKYAADAQKRMQFLKNRLAKYAITVAEYYIKMNAWSAAAVRAQTVLETYPGTPSTERA 217

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260
           +  +  AY  L        V+ ++Q  +P  
Sbjct: 218 LEIMATAYEELGQQKLKDHVLMVMQSNFPNN 248


>gi|239501206|ref|ZP_04660516.1| DNA uptake lipoprotein [Acinetobacter baumannii AB900]
          Length = 385

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 22/250 (8%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L +   +A  F VG     S+   +D+      Q   ++KA   L    +  A +     
Sbjct: 11  LALSLGVASAF-VGCSSNPSKKEVVDTGPQSSEQ-AYFDKAQKALDRGQYLDATKSLEAI 68

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +P    A+++ L   + ++    Y+ A +L E +I   P+  NVDY YY+ G+S  +
Sbjct: 69  DTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYVRGVSNME 128

Query: 144 MI--------------RDVPYDQRATKLMLQYMSRIVERYTNSPY-VKGARFYVTVGRNQ 188
           M               RDV Y     K+  Q    ++ R+ +S Y V  A+    +G+ +
Sbjct: 129 MNYDSLLRYTSLQQSHRDVSY----LKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQ-E 183

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E+   R+ +KR  ++AA  R Q V+ +Y       EA+A L  +Y  L     +++
Sbjct: 184 LAESEMNAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYDQLGDKATSQQ 243

Query: 249 VVSLIQERYP 258
            + +++  YP
Sbjct: 244 YIEVLKLNYP 253


>gi|21672663|ref|NP_660730.1| hypothetical protein BUsg389 [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|25009590|sp|Q8K9E8|Y389_BUCAP RecName: Full=UPF0169 protein BUsg_389
 gi|21623300|gb|AAM67941.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 243

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 96/205 (46%), Gaps = 12/205 (5%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y+K    LKE+NF KA     +   +        K  +   +  Y    +  A    EE
Sbjct: 35  LYQKCRKELKEKNFYKAIFDLKKIENNHAINFNNDKIKMNLIYAYYKVSDFNTAEKNIEE 94

Query: 120 YITQYPESKNVDYVYY---LVGMSYAQMIRDVPYDQR--------ATKLMLQYMSRIVER 168
           +I +YP+  N+DY++Y   L+ +S  + I    +  +        A K   Q + + V  
Sbjct: 95  FIKKYPKHLNIDYIFYIQSLINISLDKKIFHNVFPIQIYKSNPIYAIKAFFQ-LKKFVYN 153

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS YV  A+  +   + +L+  ++ I +YY    +Y+A I R + +L  Y +   A +
Sbjct: 154 YPNSIYVINAKKDLFYLKKRLSEHDLTILKYYFYHKKYIAVINRGEEILQKYPETSAAID 213

Query: 229 AMARLVEAYVALALMDEAREVVSLI 253
            +  + ++++AL + D A+++  +I
Sbjct: 214 TLKYMEKSFLALKIFDTAKKISKII 238


>gi|260553982|ref|ZP_05826247.1| competence lipoprotein comL [Acinetobacter sp. RUH2624]
 gi|260404868|gb|EEW98373.1| competence lipoprotein comL [Acinetobacter sp. RUH2624]
          Length = 373

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 110/250 (44%), Gaps = 22/250 (8%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L +   +A  F VG     S+   +D+      Q   +EKA   L    + +A +     
Sbjct: 11  LALSLGVASAF-VGCSSNPSKKEVVDTGPQSSEQ-AYFEKAQKSLDRGQYLEATKSLEAI 68

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS--- 140
              +P    A+++ L   + ++    Y+ A +L E +I   P+  NVDY YY+ G+S   
Sbjct: 69  DTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYVRGVSNME 128

Query: 141 -----------YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY-VKGARFYVTVGRNQ 188
                        Q  RD+ Y     K+  Q    ++ R+ +S Y V  A+    +G+ +
Sbjct: 129 LNYDSLLRYTSLQQSHRDISY----LKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQ-E 183

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E+   R+ +KR  +VAA  R Q V+ +Y       EA+A L  +Y  L     +++
Sbjct: 184 LAESEMNAARFNVKRKAWVAAAERSQWVIEHYPQTPQIPEALATLAYSYDQLGDKATSQQ 243

Query: 249 VVSLIQERYP 258
            + +++  YP
Sbjct: 244 YIEVLKLNYP 253


>gi|94265668|ref|ZP_01289408.1| putative lipoprotein [delta proteobacterium MLMS-1]
 gi|93453795|gb|EAT04164.1| putative lipoprotein [delta proteobacterium MLMS-1]
          Length = 272

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 77/157 (49%)

Query: 68  LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
           +   N+ KA + F++    +PF+ V   + L +A   +    Y++A  L +E+   +P +
Sbjct: 61  MNRGNYRKALKLFDEIKERYPFSSVGPLAELKAADANFHLRNYREAHLLYQEFENNHPTN 120

Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           + + YV + +GMS+ + I  +  D       +   SR+   Y +SPY + A   +   R+
Sbjct: 121 EAMPYVLFQMGMSHYRRIDTIDRDPAHAINAVAAFSRLNRAYPDSPYREEAEARLLAARD 180

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
            LA  E+ +  +Y+K  EY  A  R   +L  Y +++
Sbjct: 181 FLARHEMFVATFYVKTKEYQQAEGRLNHLLETYPESD 217


>gi|24113931|ref|NP_708441.1| outer membrane protein assembly complex subunit YfiO [Shigella
           flexneri 2a str. 301]
 gi|30063990|ref|NP_838161.1| outer membrane protein assembly complex subunit YfiO [Shigella
           flexneri 2a str. 2457T]
 gi|24053035|gb|AAN44148.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
 gi|30042246|gb|AAP17971.1| hypothetical protein S2828 [Shigella flexneri 2a str. 2457T]
 gi|281602001|gb|ADA74985.1| putative lipoprotein [Shigella flexneri 2002017]
 gi|313648269|gb|EFS12713.1| hypothetical protein SF2457T_3266 [Shigella flexneri 2a str. 2457T]
 gi|332753863|gb|EGJ84240.1| outer membrane assembly lipoprotein YfiO [Shigella flexneri
           4343-70]
 gi|332754014|gb|EGJ84386.1| outer membrane assembly lipoprotein YfiO [Shigella flexneri K-671]
 gi|332755663|gb|EGJ86026.1| outer membrane assembly lipoprotein YfiO [Shigella flexneri
           2747-71]
 gi|332765570|gb|EGJ95783.1| bamD [Shigella flexneri 2930-71]
 gi|332997823|gb|EGK17433.1| outer membrane assembly lipoprotein YfiO [Shigella flexneri K-218]
 gi|333015915|gb|EGK35251.1| outer membrane assembly lipoprotein YfiO [Shigella flexneri K-304]
          Length = 245

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/205 (22%), Positives = 89/205 (43%), Gaps = 10/205 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y  A   L++ N+ +A          +PF   +++  L   +  Y       A +  +
Sbjct: 34  EIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168
            +I   P   N+DYV Y+ G++   +          +     D +  +      S++V  
Sbjct: 94  RFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRG 153

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS Y   A   +   +++LA  E  +  YY +RG +VA + R + +L +Y D +   +
Sbjct: 154 YPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRIEGMLRDYPDTQATRD 213

Query: 229 AMARLVEAYVALALMDEAREVVSLI 253
           A+  +  AY  + +  +A +V  +I
Sbjct: 214 ALPLMENAYRQMQMNAQAEKVAKII 238


>gi|163802428|ref|ZP_02196321.1| NTPase [Vibrio sp. AND4]
 gi|159173729|gb|EDP58544.1| NTPase [Vibrio sp. AND4]
          Length = 242

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/240 (23%), Positives = 102/240 (42%), Gaps = 17/240 (7%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
           T+   +AV  L G   +       + V DV    E+Y  A   L+  N+  A E      
Sbjct: 5   TLIGLLAVSLLFGCASKE------EIVPDVP-PSELYADAQTSLQSGNWLSAIEKLEALD 57

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
             +PF   + +  L   +  Y         +    ++   P  + +D+V Y+ G+S+   
Sbjct: 58  SRYPFGAYSEQVQLDLIYAYYKNDDLALGLATISRFMRLNPTHEKMDWVLYMRGLSHMAQ 117

Query: 145 IRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
            R+  +D              K       +++ERY +SPY + ++  +   +N+LA  ++
Sbjct: 118 DRNFMHDLFNVDRSDRDPEPVKKAFGDFKKLLERYPSSPYAEDSQRRMVALKNRLANYDL 177

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
               +YL+R  ++AAI R Q +   + D E A +++   +EAY  L L D      +LI+
Sbjct: 178 ATADFYLRREAWIAAINRSQELQKAFPDTEAARKSLEIQLEAYKQLKLDDAVARTEALIK 237


>gi|212636675|ref|YP_002313200.1| hypothetical protein swp_3941 [Shewanella piezotolerans WP3]
 gi|212558159|gb|ACJ30613.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
          Length = 276

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 10/211 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y +A   ++  N+SKA          FPF     +  L   F  Y         +  + 
Sbjct: 60  LYSQARTSMELGNYSKAVRSLEALDSRFPFGPHKTQVQLDLIFAYYKLDDPASGIANIDR 119

Query: 120 YITQYPESKNVDYVYYLVGMSYAQ----MIRDV------PYDQRATKLMLQYMSRIVERY 169
           +I   P  K++DYVYY+ G+   Q    +  D+        D +A +   +   R+V+ Y
Sbjct: 120 FIRLNPTHKDIDYVYYMRGLVNMQSDRYLFHDMLNIDRSDRDPKAAQDAFKDFDRLVKAY 179

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
            NS Y   A+  +   +N+LA   +++  YY+K   + AA  R QLV+  +      E A
Sbjct: 180 PNSKYAADAQKRMQHLKNRLALYSIKVAEYYIKMNAWSAAAIRAQLVMEGFPGTPSTERA 239

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260
           +  + +AY  L         + ++Q  +P  
Sbjct: 240 LEIMSQAYGELGQDKLKEHTLMVMQANFPDN 270


>gi|15617006|ref|NP_240219.1| hypothetical protein BU402 [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219681758|ref|YP_002468144.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|219682313|ref|YP_002468697.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|257471460|ref|ZP_05635459.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|18202269|sp|P57482|Y402_BUCAI RecName: Full=UPF0169 protein BU402
 gi|25403614|pir||A84977 hypothetical protein [imported] - Buchnera sp. (strain APS)
 gi|10039071|dbj|BAB13105.1| hypothetical protein [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
 gi|219622046|gb|ACL30202.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219624601|gb|ACL30756.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|311086139|gb|ADP66221.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086712|gb|ADP66793.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311087297|gb|ADP67377.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
 gi|311087808|gb|ADP67887.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 246

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 99/209 (47%), Gaps = 19/209 (9%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS-AFVQYSAGKYQQAASLGE 118
           +YEK+   L+++NF  A     +  ++   A ++   + +   +  Y    + QA    E
Sbjct: 36  LYEKSNKELRKENFDNAISILEKIKKNNNTANISNDKIQIDLIYAYYKILNFDQARKNIE 95

Query: 119 EYITQYPESKNVDYVYY---LVGMSYAQM-----------IRDVPYDQRATKLMLQYMSR 164
           E++  YP   N+DYV Y   L+ MS  +              D  Y + A    L+Y   
Sbjct: 96  EFMYFYPNHPNIDYVVYIQCLISMSLDKNRFFSVFPINYYKNDYFYAKNAF-FQLKYF-- 152

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
            + +Y  S YV  A+  +   +N+L+  ++ I ++Y    EY+A I R + +L  YS+  
Sbjct: 153 -IYQYPKSRYVVNAKKNLIYIKNRLSEHDLSILKFYFFHKEYIAVINRGEEMLQRYSETP 211

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLI 253
            A +A+  + ++Y AL + D A+++  +I
Sbjct: 212 SARKALIYIEKSYYALKIFDTAKKISKII 240


>gi|332876322|ref|ZP_08444095.1| outer membrane assembly lipoprotein YfiO [Acinetobacter baumannii
           6014059]
 gi|322507011|gb|ADX02465.1| Putative competence protein [Acinetobacter baumannii 1656-2]
 gi|323516879|gb|ADX91260.1| DNA uptake lipoprotein [Acinetobacter baumannii TCDC-AB0715]
 gi|332735473|gb|EGJ66527.1| outer membrane assembly lipoprotein YfiO [Acinetobacter baumannii
           6014059]
          Length = 376

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 22/250 (8%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L +   +A  F VG     S+   +D+      Q   ++KA   L    +  A +     
Sbjct: 2   LALSLGVASAF-VGCSSNPSKKEVVDTGPQSSEQ-AYFDKAQKALDRGQYLDATKSLEAI 59

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +P    A+++ L   + ++    Y+ A +L E +I   P+  NVDY YY+ G+S  +
Sbjct: 60  DTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYVRGVSNME 119

Query: 144 MI--------------RDVPYDQRATKLMLQYMSRIVERYTNSPY-VKGARFYVTVGRNQ 188
           M               RDV Y     K+  Q    ++ R+ +S Y V  A+    +G+ +
Sbjct: 120 MNYDSLLRYTSLQQSHRDVSY----LKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQ-E 174

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E+   R+ +KR  ++AA  R Q V+ +Y       EA+A L  +Y  L     +++
Sbjct: 175 LAESEMNAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYDQLGDKATSQQ 234

Query: 249 VVSLIQERYP 258
            + +++  YP
Sbjct: 235 YIEVLKLNYP 244


>gi|218547882|ref|YP_002381673.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           fergusonii ATCC 35469]
 gi|218355423|emb|CAQ88031.1| putative lipoprotein [Escherichia fergusonii ATCC 35469]
 gi|324111236|gb|EGC05218.1| outer membrane assembly lipoprotein YfiO [Escherichia fergusonii
           B253]
 gi|325496331|gb|EGC94190.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           fergusonii ECD227]
          Length = 245

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/206 (22%), Positives = 89/206 (43%), Gaps = 10/206 (4%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            E+Y  A   L++ N+ +A          +PF   +++  L   +  Y       A +  
Sbjct: 33  NEIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAI 92

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVE 167
           + +I   P   N+DYV Y+ G++   +          +     D +  +      S++V 
Sbjct: 93  DRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVR 152

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y NS Y   A   +   +++LA  E  +  YY +RG +VA + R + +L +Y D +   
Sbjct: 153 GYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATR 212

Query: 228 EAMARLVEAYVALALMDEAREVVSLI 253
           +A+  +  AY  + +  +A +V  +I
Sbjct: 213 DALPLMENAYRQMQMNAQAEKVAKII 238


>gi|184157113|ref|YP_001845452.1| DNA uptake lipoprotein [Acinetobacter baumannii ACICU]
 gi|183208707|gb|ACC56105.1| DNA uptake lipoprotein [Acinetobacter baumannii ACICU]
          Length = 385

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 22/250 (8%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L +   +A  F VG     S+   +D+      Q   ++KA   L    +  A +     
Sbjct: 11  LALSLGVASAF-VGCSSNPSKKEVVDTGPQSSEQ-AYFDKAQKALDRGQYLDATKSLEAI 68

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +P    A+++ L   + ++    Y+ A +L E +I   P+  NVDY YY+ G+S  +
Sbjct: 69  DTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYVRGVSNME 128

Query: 144 MI--------------RDVPYDQRATKLMLQYMSRIVERYTNSPY-VKGARFYVTVGRNQ 188
           M               RDV Y     K+  Q    ++ R+ +S Y V  A+    +G+ +
Sbjct: 129 MNYDSLLRYTSLQQSHRDVSY----LKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQ-E 183

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E+   R+ +KR  ++AA  R Q V+ +Y       EA+A L  +Y  L     +++
Sbjct: 184 LAESEMNAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYDQLGDKATSQQ 243

Query: 249 VVSLIQERYP 258
            + +++  YP
Sbjct: 244 YIEVLKLNYP 253


>gi|261342025|ref|ZP_05969883.1| competence lipoprotein ComL [Enterobacter cancerogenus ATCC 35316]
 gi|288315681|gb|EFC54619.1| competence lipoprotein ComL [Enterobacter cancerogenus ATCC 35316]
          Length = 245

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/205 (21%), Positives = 89/205 (43%), Gaps = 10/205 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y  A   L++ N+ +A          +PF   +++  L   +  Y       A +  +
Sbjct: 34  EIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQATID 93

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168
            ++   P   N+DYV Y+ G++   +          +     D +  +      S++V  
Sbjct: 94  RFMRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARDAFNDFSKLVRG 153

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS Y+  A   +   +++LA  E  +  YY +RG +VA + R + +L +Y D +   +
Sbjct: 154 YPNSQYITDATKRLVFLKDRLAKYEYSVAEYYTRRGAWVAVVNRVEGMLRDYPDTQATRD 213

Query: 229 AMARLVEAYVALALMDEAREVVSLI 253
            +  +  AY  + +  +A +V  +I
Sbjct: 214 GLKLMENAYRQMQMTGQAEKVAKII 238


>gi|170765615|ref|ZP_02900426.1| outer membrane assembly lipoprotein YfiO [Escherichia albertii
           TW07627]
 gi|170124761|gb|EDS93692.1| outer membrane assembly lipoprotein YfiO [Escherichia albertii
           TW07627]
          Length = 245

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/205 (22%), Positives = 89/205 (43%), Gaps = 10/205 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y  A   L++ N+ +A          +PF   +++  L   +  Y       A +  +
Sbjct: 34  EIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168
            +I   P   N+DYV Y+ G++   +          +     D +  +      S++V  
Sbjct: 94  RFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVRG 153

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS Y   A   +   +++LA  E  +  YY +RG +VA + R + +L +Y D +   +
Sbjct: 154 YPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRD 213

Query: 229 AMARLVEAYVALALMDEAREVVSLI 253
           A+  +  AY  + +  +A +V  +I
Sbjct: 214 ALPLMENAYRQMQMNAQAEKVAKII 238


>gi|156932862|ref|YP_001436778.1| outer membrane protein assembly complex subunit YfiO [Cronobacter
           sakazakii ATCC BAA-894]
 gi|156531116|gb|ABU75942.1| hypothetical protein ESA_00659 [Cronobacter sakazakii ATCC BAA-894]
          Length = 245

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 10/205 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y  A   L++ N+  A          +PF   +++  L   +  Y       A +  +
Sbjct: 34  EIYATAQQKLQDGNWKAAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168
            +I   P   N+DYV Y+ G++   +          +     D +  +   +  S++V  
Sbjct: 94  RFIRLNPTHPNIDYVIYMRGLTNMALDDSALQGFFGVDRSDRDPQHARDAFRDFSKLVRG 153

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y  S Y   A   +   +++L+  E+ + +YY KRG +VA + R + +L +Y D +   E
Sbjct: 154 YPQSQYATDATKRLVYLKDRLSKYELSVAQYYTKRGAWVAVVNRVEGMLRDYPDTQATHE 213

Query: 229 AMARLVEAYVALALMDEAREVVSLI 253
            +  +  AY  L L  +A +V  +I
Sbjct: 214 GLGLMENAYRELQLNAQADKVAKII 238


>gi|86148439|ref|ZP_01066730.1| DNA uptake lipoprotein [Vibrio sp. MED222]
 gi|218708593|ref|YP_002416214.1| hypothetical lipoprotein [Vibrio splendidus LGP32]
 gi|85833793|gb|EAQ51960.1| DNA uptake lipoprotein [Vibrio sp. MED222]
 gi|218321612|emb|CAV17564.1| Hypothetical lipoprotein [Vibrio splendidus LGP32]
          Length = 242

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 101/241 (41%), Gaps = 17/241 (7%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           LT+   +AV  LVG    SS ++  D    V     +Y  A   L+  ++  A E     
Sbjct: 4   LTLTGLLAVSLLVGC--SSSEEIVPDVPPSV-----LYSDAQESLQSGSWLSAIEKLEAL 56

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +PF   + +  L   +  Y         +    ++   P  +  D+V Y+ G+++  
Sbjct: 57  DSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATISRFLRLNPTHEKQDWVLYMRGLTHMA 116

Query: 144 MIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
             R+  +D              KL      R++ER+  SPY + A+  +   +N+LA  +
Sbjct: 117 QDRNFMHDIFNIDRSDRDPEPVKLAFADFKRLLERFPASPYAEDAQKRMFALKNRLAEYD 176

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +    +YL+R  ++AAI R Q +   Y D   A +++   +EAY  L L D       LI
Sbjct: 177 LATADFYLRREAWIAAINRTQELQKTYPDTIAARKSLDIQLEAYEQLGLEDAVLRTEKLI 236

Query: 254 Q 254
           +
Sbjct: 237 E 237


>gi|323963905|gb|EGB59398.1| outer membrane assembly lipoprotein YfiO [Escherichia coli M863]
 gi|327252301|gb|EGE63973.1| outer membrane assembly lipoprotein YfiO [Escherichia coli STEC_7v]
          Length = 245

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/205 (22%), Positives = 89/205 (43%), Gaps = 10/205 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y  A   L++ N+ +A          +PF   +++  L   +  Y       A +  +
Sbjct: 34  EIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168
            +I   P   N+DYV Y+ G++   +          +     D +  +      S++V  
Sbjct: 94  RFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRG 153

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS Y   A   +   +++LA  E  +  YY +RG +VA + R + +L +Y D +   +
Sbjct: 154 YPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEDMLRDYPDTQATRD 213

Query: 229 AMARLVEAYVALALMDEAREVVSLI 253
           A+  +  AY  + +  +A +V  +I
Sbjct: 214 ALPLMENAYRQMQMNAQAEKVAKII 238


>gi|110642758|ref|YP_670488.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli 536]
 gi|191174570|ref|ZP_03036065.1| outer membrane assembly lipoprotein YfiO [Escherichia coli F11]
 gi|300976567|ref|ZP_07173519.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           200-1]
 gi|110344350|gb|ABG70587.1| hypothetical lipoprotein YfiO precursor [Escherichia coli 536]
 gi|190905143|gb|EDV64787.1| outer membrane assembly lipoprotein YfiO [Escherichia coli F11]
 gi|300308509|gb|EFJ63029.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           200-1]
 gi|324012461|gb|EGB81680.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 60-1]
          Length = 245

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/205 (22%), Positives = 89/205 (43%), Gaps = 10/205 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y  A   L++ N+ +A          +PF   +++  L   +  Y       A +  +
Sbjct: 34  EIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168
            +I   P   N+DYV Y+ G++   +          +     D +  +      S++V  
Sbjct: 94  RFIRLNPTHPNIDYVMYMRGLTNMALDDSALQRFFGVDRSDRDPQHARAAFSDFSKLVRG 153

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS Y   A   +   +++LA  E  +  YY +RG +VA + R + +L +Y D +   +
Sbjct: 154 YPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRD 213

Query: 229 AMARLVEAYVALALMDEAREVVSLI 253
           A+  +  AY  + +  +A +V  +I
Sbjct: 214 ALPLMENAYRQMQMNAQAEKVAKII 238


>gi|15803119|ref|NP_289150.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli O157:H7 EDL933]
 gi|15832712|ref|NP_311485.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli O157:H7 str. Sakai]
 gi|16130516|ref|NP_417086.1| lipoprotein required for OM biogenesis, in BamABCD complex
           [Escherichia coli str. K-12 substr. MG1655]
 gi|26248958|ref|NP_754998.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli CFT073]
 gi|74313154|ref|YP_311573.1| outer membrane protein assembly complex subunit YfiO [Shigella
           sonnei Ss046]
 gi|89109397|ref|AP_003177.1| predicted lipoprotein [Escherichia coli str. K-12 substr. W3110]
 gi|91211929|ref|YP_541915.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli UTI89]
 gi|117624819|ref|YP_853732.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli APEC O1]
 gi|157155227|ref|YP_001463916.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli E24377A]
 gi|157162071|ref|YP_001459389.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli HS]
 gi|168752064|ref|ZP_02777086.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC4113]
 gi|168758665|ref|ZP_02783672.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC4401]
 gi|168762388|ref|ZP_02787395.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC4501]
 gi|168771701|ref|ZP_02796708.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC4486]
 gi|168773477|ref|ZP_02798484.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC4196]
 gi|168789498|ref|ZP_02814505.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC869]
 gi|168801713|ref|ZP_02826720.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC508]
 gi|170019126|ref|YP_001724080.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli ATCC 8739]
 gi|170082200|ref|YP_001731520.1| lipoprotein [Escherichia coli str. K-12 substr. DH10B]
 gi|170682905|ref|YP_001744780.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli SMS-3-5]
 gi|187732232|ref|YP_001881383.1| outer membrane protein assembly complex subunit YfiO [Shigella
           boydii CDC 3083-94]
 gi|188492325|ref|ZP_02999595.1| outer membrane assembly lipoprotein YfiO [Escherichia coli 53638]
 gi|191169057|ref|ZP_03030820.1| outer membrane assembly lipoprotein YfiO [Escherichia coli B7A]
 gi|193064045|ref|ZP_03045130.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E22]
 gi|193071696|ref|ZP_03052597.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E110019]
 gi|194430166|ref|ZP_03062667.1| outer membrane assembly lipoprotein YfiO [Escherichia coli B171]
 gi|194439383|ref|ZP_03071461.1| outer membrane assembly lipoprotein YfiO [Escherichia coli 101-1]
 gi|195940190|ref|ZP_03085572.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli O157:H7 str. EC4024]
 gi|208807425|ref|ZP_03249762.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC4206]
 gi|208813580|ref|ZP_03254909.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC4045]
 gi|208818633|ref|ZP_03258953.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC4042]
 gi|209395708|ref|YP_002272068.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC4115]
 gi|209920072|ref|YP_002294156.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli SE11]
 gi|215487934|ref|YP_002330365.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli O127:H6 str. E2348/69]
 gi|217327021|ref|ZP_03443104.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. TW14588]
 gi|218555175|ref|YP_002388088.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli IAI1]
 gi|218559516|ref|YP_002392429.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli S88]
 gi|218690714|ref|YP_002398926.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli ED1a]
 gi|218696220|ref|YP_002403887.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli 55989]
 gi|218701107|ref|YP_002408736.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli IAI39]
 gi|218706097|ref|YP_002413616.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli UMN026]
 gi|227888162|ref|ZP_04005967.1| DNA uptake lipoprotein ComL [Escherichia coli 83972]
 gi|237706816|ref|ZP_04537297.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           sp. 3_2_53FAA]
 gi|238901756|ref|YP_002927552.1| putative lipoprotein [Escherichia coli BW2952]
 gi|253772509|ref|YP_003035340.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli 'BL21-Gold(DE3)pLysS AG']
 gi|254037672|ref|ZP_04871730.1| outer membrane assembly lipoprotein YfiO [Escherichia sp. 1_1_43]
 gi|254162566|ref|YP_003045674.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli B str. REL606]
 gi|254794543|ref|YP_003079380.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli O157:H7 str. TW14359]
 gi|256019584|ref|ZP_05433449.1| outer membrane protein assembly complex subunit YfiO [Shigella sp.
           D9]
 gi|256024876|ref|ZP_05438741.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           sp. 4_1_40B]
 gi|260845277|ref|YP_003223055.1| putative lipoprotein [Escherichia coli O103:H2 str. 12009]
 gi|260856685|ref|YP_003230576.1| putative lipoprotein [Escherichia coli O26:H11 str. 11368]
 gi|260869277|ref|YP_003235679.1| putative lipoprotein [Escherichia coli O111:H- str. 11128]
 gi|261227480|ref|ZP_05941761.1| Lipoprotein required for outer membrane biogenesis [Escherichia
           coli O157:H7 str. FRIK2000]
 gi|261255674|ref|ZP_05948207.1| putative lipoprotein [Escherichia coli O157:H7 str. FRIK966]
 gi|291283868|ref|YP_003500686.1| putative lipoprotein [Escherichia coli O55:H7 str. CB9615]
 gi|293406105|ref|ZP_06650031.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli FVEC1412]
 gi|293415868|ref|ZP_06658508.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli B185]
 gi|297516263|ref|ZP_06934649.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli OP50]
 gi|298381837|ref|ZP_06991434.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli FVEC1302]
 gi|300819931|ref|ZP_07100114.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           107-1]
 gi|300825128|ref|ZP_07105221.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           119-7]
 gi|300900219|ref|ZP_07118405.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           198-1]
 gi|300905085|ref|ZP_07122892.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 84-1]
 gi|300921139|ref|ZP_07137520.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           115-1]
 gi|300922521|ref|ZP_07138630.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           182-1]
 gi|300930680|ref|ZP_07146064.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           187-1]
 gi|300940368|ref|ZP_07154956.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 21-1]
 gi|300948989|ref|ZP_07163045.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           116-1]
 gi|300957378|ref|ZP_07169595.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           175-1]
 gi|300986848|ref|ZP_07177831.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 45-1]
 gi|301024187|ref|ZP_07187894.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           196-1]
 gi|301026355|ref|ZP_07189803.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 69-1]
 gi|301050464|ref|ZP_07197346.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           185-1]
 gi|301305759|ref|ZP_07211846.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           124-1]
 gi|301326711|ref|ZP_07220029.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 78-1]
 gi|301644037|ref|ZP_07244055.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           146-1]
 gi|306812485|ref|ZP_07446683.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli NC101]
 gi|307139316|ref|ZP_07498672.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli H736]
 gi|307315091|ref|ZP_07594675.1| outer membrane assembly lipoprotein YfiO [Escherichia coli W]
 gi|309794108|ref|ZP_07688532.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           145-7]
 gi|312965510|ref|ZP_07779742.1| conserved hypothetical protein [Escherichia coli 2362-75]
 gi|312973161|ref|ZP_07787334.1| conserved hypothetical protein [Escherichia coli 1827-70]
 gi|331643312|ref|ZP_08344443.1| putative lipoprotein [Escherichia coli H736]
 gi|331648339|ref|ZP_08349427.1| putative lipoprotein [Escherichia coli M605]
 gi|331654055|ref|ZP_08355055.1| putative lipoprotein [Escherichia coli M718]
 gi|331658745|ref|ZP_08359687.1| putative lipoprotein [Escherichia coli TA206]
 gi|331669347|ref|ZP_08370193.1| putative lipoprotein [Escherichia coli TA271]
 gi|331674038|ref|ZP_08374800.1| putative lipoprotein [Escherichia coli TA280]
 gi|331678589|ref|ZP_08379263.1| putative lipoprotein [Escherichia coli H591]
 gi|332280709|ref|ZP_08393122.1| lipoprotein [Shigella sp. D9]
 gi|81170861|sp|P0AC04|YFIO_ECO57 RecName: Full=UPF0169 lipoprotein yfiO; Flags: Precursor
 gi|81170862|sp|P0AC03|YFIO_ECOL6 RecName: Full=UPF0169 lipoprotein yfiO; Flags: Precursor
 gi|81170863|sp|P0AC02|YFIO_ECOLI RecName: Full=UPF0169 lipoprotein yfiO; Flags: Precursor
 gi|12517019|gb|AAG57708.1|AE005490_3 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
 gi|26109364|gb|AAN81566.1|AE016764_248 Hypothetical lipoprotein yfiO precursor [Escherichia coli CFT073]
 gi|1788947|gb|AAC75644.1| lipoprotein required for OM biogenesis, in BamABCD complex
           [Escherichia coli str. K-12 substr. MG1655]
 gi|1799999|dbj|BAA16480.1| predicted lipoprotein [Escherichia coli str. K12 substr. W3110]
 gi|13362929|dbj|BAB36881.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
 gi|73856631|gb|AAZ89338.1| conserved hypothetical protein [Shigella sonnei Ss046]
 gi|91073503|gb|ABE08384.1| hypothetical protein UTI89_C2928 [Escherichia coli UTI89]
 gi|115513943|gb|ABJ02018.1| putative lipoprotein [Escherichia coli APEC O1]
 gi|157067751|gb|ABV07006.1| outer membrane assembly lipoprotein YfiO [Escherichia coli HS]
 gi|157077257|gb|ABV16965.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E24377A]
 gi|169754054|gb|ACA76753.1| conserved hypothetical protein [Escherichia coli ATCC 8739]
 gi|169890035|gb|ACB03742.1| predicted lipoprotein [Escherichia coli str. K-12 substr. DH10B]
 gi|170520623|gb|ACB18801.1| outer membrane assembly lipoprotein YfiO [Escherichia coli SMS-3-5]
 gi|187429224|gb|ACD08498.1| outer membrane assembly lipoprotein YfiO [Shigella boydii CDC
           3083-94]
 gi|187770689|gb|EDU34533.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC4196]
 gi|188013996|gb|EDU52118.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC4113]
 gi|188487524|gb|EDU62627.1| outer membrane assembly lipoprotein YfiO [Escherichia coli 53638]
 gi|189354558|gb|EDU72977.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC4401]
 gi|189359602|gb|EDU78021.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC4486]
 gi|189367289|gb|EDU85705.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC4501]
 gi|189370903|gb|EDU89319.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC869]
 gi|189376189|gb|EDU94605.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC508]
 gi|190900898|gb|EDV60684.1| outer membrane assembly lipoprotein YfiO [Escherichia coli B7A]
 gi|192929280|gb|EDV82889.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E22]
 gi|192954991|gb|EDV85493.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E110019]
 gi|194411791|gb|EDX28112.1| outer membrane assembly lipoprotein YfiO [Escherichia coli B171]
 gi|194421745|gb|EDX37754.1| outer membrane assembly lipoprotein YfiO [Escherichia coli 101-1]
 gi|208727226|gb|EDZ76827.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC4206]
 gi|208734857|gb|EDZ83544.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC4045]
 gi|208738756|gb|EDZ86438.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC4042]
 gi|209157108|gb|ACI34541.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC4115]
 gi|209762668|gb|ACI79646.1| hypothetical protein ECs3458 [Escherichia coli]
 gi|209762670|gb|ACI79647.1| hypothetical protein ECs3458 [Escherichia coli]
 gi|209762672|gb|ACI79648.1| hypothetical protein ECs3458 [Escherichia coli]
 gi|209762674|gb|ACI79649.1| hypothetical protein ECs3458 [Escherichia coli]
 gi|209762676|gb|ACI79650.1| hypothetical protein ECs3458 [Escherichia coli]
 gi|209913331|dbj|BAG78405.1| putative lipoprotein [Escherichia coli SE11]
 gi|215266006|emb|CAS10417.1| predicted lipoprotein [Escherichia coli O127:H6 str. E2348/69]
 gi|217319388|gb|EEC27813.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. TW14588]
 gi|218352952|emb|CAU98751.1| putative lipoprotein [Escherichia coli 55989]
 gi|218361943|emb|CAQ99545.1| putative lipoprotein [Escherichia coli IAI1]
 gi|218366285|emb|CAR04037.1| putative lipoprotein [Escherichia coli S88]
 gi|218371093|emb|CAR18922.1| putative lipoprotein [Escherichia coli IAI39]
 gi|218428278|emb|CAR09056.1| putative lipoprotein [Escherichia coli ED1a]
 gi|218433194|emb|CAR14093.1| putative lipoprotein [Escherichia coli UMN026]
 gi|226839296|gb|EEH71317.1| outer membrane assembly lipoprotein YfiO [Escherichia sp. 1_1_43]
 gi|226899856|gb|EEH86115.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           sp. 3_2_53FAA]
 gi|227834802|gb|EEJ45268.1| DNA uptake lipoprotein ComL [Escherichia coli 83972]
 gi|238862627|gb|ACR64625.1| predicted lipoprotein [Escherichia coli BW2952]
 gi|242378191|emb|CAQ32966.1| BamD, subunit of Outer Membrane Protein Assembly Complex
           [Escherichia coli BL21(DE3)]
 gi|253323553|gb|ACT28155.1| outer membrane assembly lipoprotein YfiO [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253974467|gb|ACT40138.1| predicted lipoprotein [Escherichia coli B str. REL606]
 gi|253978634|gb|ACT44304.1| predicted lipoprotein [Escherichia coli BL21(DE3)]
 gi|254593943|gb|ACT73304.1| Lipoprotein required for outer membrane biogenesis [Escherichia
           coli O157:H7 str. TW14359]
 gi|257755334|dbj|BAI26836.1| predicted lipoprotein [Escherichia coli O26:H11 str. 11368]
 gi|257760424|dbj|BAI31921.1| predicted lipoprotein [Escherichia coli O103:H2 str. 12009]
 gi|257765633|dbj|BAI37128.1| predicted lipoprotein [Escherichia coli O111:H- str. 11128]
 gi|260448329|gb|ACX38751.1| outer membrane assembly lipoprotein YfiO [Escherichia coli DH1]
 gi|281179643|dbj|BAI55973.1| putative lipoprotein [Escherichia coli SE15]
 gi|284922543|emb|CBG35630.1| putative lipoprotein [Escherichia coli 042]
 gi|290763741|gb|ADD57702.1| predicted lipoprotein [Escherichia coli O55:H7 str. CB9615]
 gi|291426111|gb|EFE99143.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli FVEC1412]
 gi|291432057|gb|EFF05039.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli B185]
 gi|294489858|gb|ADE88614.1| outer membrane assembly lipoprotein YfiO [Escherichia coli IHE3034]
 gi|298276977|gb|EFI18493.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli FVEC1302]
 gi|299880529|gb|EFI88740.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           196-1]
 gi|300297835|gb|EFJ54220.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           185-1]
 gi|300315881|gb|EFJ65665.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           175-1]
 gi|300356254|gb|EFJ72124.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           198-1]
 gi|300395570|gb|EFJ79108.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 69-1]
 gi|300403012|gb|EFJ86550.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 84-1]
 gi|300407858|gb|EFJ91396.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 45-1]
 gi|300411912|gb|EFJ95222.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           115-1]
 gi|300421133|gb|EFK04444.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           182-1]
 gi|300451546|gb|EFK15166.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           116-1]
 gi|300454822|gb|EFK18315.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 21-1]
 gi|300461454|gb|EFK24947.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           187-1]
 gi|300522400|gb|EFK43469.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           119-7]
 gi|300527519|gb|EFK48581.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           107-1]
 gi|300839013|gb|EFK66773.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           124-1]
 gi|300846634|gb|EFK74394.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 78-1]
 gi|301077611|gb|EFK92417.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           146-1]
 gi|305854523|gb|EFM54961.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli NC101]
 gi|306905520|gb|EFN36054.1| outer membrane assembly lipoprotein YfiO [Escherichia coli W]
 gi|307554610|gb|ADN47385.1| outer membrane assembly lipoprotein YfiO [Escherichia coli ABU
           83972]
 gi|307625853|gb|ADN70157.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli UM146]
 gi|308122013|gb|EFO59275.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           145-7]
 gi|309702977|emb|CBJ02308.1| putative lipoprotein [Escherichia coli ETEC H10407]
 gi|310333103|gb|EFQ00317.1| conserved hypothetical protein [Escherichia coli 1827-70]
 gi|312289930|gb|EFR17818.1| conserved hypothetical protein [Escherichia coli 2362-75]
 gi|312947169|gb|ADR27996.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli O83:H1 str. NRG 857C]
 gi|315061910|gb|ADT76237.1| predicted lipoprotein [Escherichia coli W]
 gi|315137215|dbj|BAJ44374.1| putative lipoprotein [Escherichia coli DH1]
 gi|315253123|gb|EFU33091.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 85-1]
 gi|315284806|gb|EFU44251.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           110-3]
 gi|315290936|gb|EFU50301.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           153-1]
 gi|315298637|gb|EFU57892.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 16-3]
 gi|315615336|gb|EFU95970.1| outer membrane assembly lipoprotein YfiO [Escherichia coli 3431]
 gi|320177088|gb|EFW52105.1| outer membrane protein assembly complex subunit YfiO [Shigella
           dysenteriae CDC 74-1112]
 gi|320185009|gb|EFW59791.1| outer membrane protein assembly complex subunit YfiO [Shigella
           flexneri CDC 796-83]
 gi|320188932|gb|EFW63591.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli O157:H7 str. EC1212]
 gi|320194760|gb|EFW69389.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli WV_060327]
 gi|320198370|gb|EFW72972.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli EC4100B]
 gi|320640779|gb|EFX10277.1| outer membrane biogenesis protein BamD [Escherichia coli O157:H7
           str. G5101]
 gi|320646124|gb|EFX15069.1| outer membrane biogenesis protein BamD [Escherichia coli O157:H-
           str. 493-89]
 gi|320651421|gb|EFX19822.1| outer membrane biogenesis protein BamD [Escherichia coli O157:H-
           str. H 2687]
 gi|320657026|gb|EFX24849.1| outer membrane biogenesis protein BamD [Escherichia coli O55:H7
           str. 3256-97 TW 07815]
 gi|320662690|gb|EFX30034.1| outer membrane biogenesis protein BamD [Escherichia coli O55:H7
           str. USDA 5905]
 gi|320667507|gb|EFX34431.1| outer membrane biogenesis protein BamD [Escherichia coli O157:H7
           str. LSU-61]
 gi|323156251|gb|EFZ42410.1| outer membrane assembly lipoprotein YfiO [Escherichia coli EPECa14]
 gi|323167769|gb|EFZ53464.1| outer membrane assembly lipoprotein YfiO [Shigella sonnei 53G]
 gi|323173089|gb|EFZ58720.1| outer membrane assembly lipoprotein YfiO [Escherichia coli LT-68]
 gi|323177277|gb|EFZ62865.1| outer membrane assembly lipoprotein YfiO [Escherichia coli 1180]
 gi|323184528|gb|EFZ69902.1| outer membrane assembly lipoprotein YfiO [Escherichia coli 1357]
 gi|323188382|gb|EFZ73673.1| outer membrane assembly lipoprotein YfiO [Escherichia coli RN587/1]
 gi|323377509|gb|ADX49777.1| outer membrane assembly lipoprotein YfiO [Escherichia coli KO11]
 gi|323935609|gb|EGB31929.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E1520]
 gi|323941385|gb|EGB37569.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E482]
 gi|323946276|gb|EGB42309.1| outer membrane assembly lipoprotein YfiO [Escherichia coli H120]
 gi|323957036|gb|EGB52762.1| outer membrane assembly lipoprotein YfiO [Escherichia coli H263]
 gi|323960545|gb|EGB56174.1| outer membrane assembly lipoprotein YfiO [Escherichia coli H489]
 gi|323971460|gb|EGB66696.1| outer membrane assembly lipoprotein YfiO [Escherichia coli TA007]
 gi|323978452|gb|EGB73536.1| outer membrane assembly lipoprotein YfiO [Escherichia coli TW10509]
 gi|324005835|gb|EGB75054.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 57-2]
 gi|324016578|gb|EGB85797.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           117-3]
 gi|324120054|gb|EGC13930.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E1167]
 gi|326344349|gb|EGD68107.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli O157:H7 str. 1125]
 gi|326347718|gb|EGD71435.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli O157:H7 str. 1044]
 gi|330912360|gb|EGH40870.1| putative component of the lipoprotein assembly complex [Escherichia
           coli AA86]
 gi|331036783|gb|EGI09007.1| putative lipoprotein [Escherichia coli H736]
 gi|331042086|gb|EGI14228.1| putative lipoprotein [Escherichia coli M605]
 gi|331047437|gb|EGI19514.1| putative lipoprotein [Escherichia coli M718]
 gi|331053327|gb|EGI25356.1| putative lipoprotein [Escherichia coli TA206]
 gi|331063015|gb|EGI34928.1| putative lipoprotein [Escherichia coli TA271]
 gi|331068777|gb|EGI40170.1| putative lipoprotein [Escherichia coli TA280]
 gi|331073419|gb|EGI44740.1| putative lipoprotein [Escherichia coli H591]
 gi|332103061|gb|EGJ06407.1| lipoprotein [Shigella sp. D9]
 gi|332344466|gb|AEE57800.1| conserved hypothetical protein [Escherichia coli UMNK88]
 gi|332999361|gb|EGK18946.1| outer membrane assembly lipoprotein YfiO [Shigella flexneri VA-6]
 gi|333001155|gb|EGK20725.1| outer membrane assembly lipoprotein YfiO [Shigella flexneri K-272]
 gi|333015793|gb|EGK35130.1| outer membrane assembly lipoprotein YfiO [Shigella flexneri K-227]
          Length = 245

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/205 (22%), Positives = 89/205 (43%), Gaps = 10/205 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y  A   L++ N+ +A          +PF   +++  L   +  Y       A +  +
Sbjct: 34  EIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168
            +I   P   N+DYV Y+ G++   +          +     D +  +      S++V  
Sbjct: 94  RFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRG 153

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS Y   A   +   +++LA  E  +  YY +RG +VA + R + +L +Y D +   +
Sbjct: 154 YPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRD 213

Query: 229 AMARLVEAYVALALMDEAREVVSLI 253
           A+  +  AY  + +  +A +V  +I
Sbjct: 214 ALPLMENAYRQMQMNAQAEKVAKII 238


>gi|332088104|gb|EGI93229.1| outer membrane assembly lipoprotein YfiO [Shigella boydii 5216-82]
          Length = 245

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/205 (22%), Positives = 89/205 (43%), Gaps = 10/205 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y  A   L++ N+ +A          +PF   +++  L   +  Y       A +  +
Sbjct: 34  EIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168
            +I   P   N+DYV Y+ G++   +          +     D +  +      S++V  
Sbjct: 94  RFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRG 153

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS Y   A   +   +++LA  E  +  YY +RG +VA + R + +L +Y D +   +
Sbjct: 154 YPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRD 213

Query: 229 AMARLVEAYVALALMDEAREVVSLI 253
           A+  +  AY  + +  +A +V  +I
Sbjct: 214 ALPLMENAYRQMQINAQAEKVAKII 238


>gi|148244619|ref|YP_001219313.1| competence lipoprotein ComL [Candidatus Vesicomyosocius okutanii
           HA]
 gi|146326446|dbj|BAF61589.1| competence lipoprotein ComL [Candidatus Vesicomyosocius okutanii
           HA]
          Length = 255

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 105/248 (42%), Gaps = 19/248 (7%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN----FSKAYEY 79
           L I     V  L G   Q  +++ ++S+T     +  + +A    KEQ      +KA + 
Sbjct: 4   LFIILPFLVLLLNGCSWQ--KEIKIESITKGWSPKTFFTQA----KEQESLGLTNKAIKL 57

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
           F Q    +P +  A +S L  A+  Y    Y QA      YI  YPE  +  Y YYL G+
Sbjct: 58  FEQLQATYPGSKYALQSKLEIAYALYKNKDYDQAIYHLNNYIKFYPEHFSTPYAYYLRGV 117

Query: 140 SYAQMIRDVPYD------QRATKLM---LQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
                 R    D      QR+   +     Y   +++++  + Y +     +   RN L+
Sbjct: 118 ISQDKSRSFLDDYFTDSAQRSVNSVRNAFNYYLALIDKFPKTKYTEDTITRLVALRNILS 177

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
             E+ I  YY K+G  +AAI R + ++  Y +      A+  +   Y A+     A++  
Sbjct: 178 RHELFIAIYYTKKGANIAAINRTKFIVEKYQNTPSVPAALHLMATNYDAINAGTLAKDTR 237

Query: 251 SLIQERYP 258
            ++++ YP
Sbjct: 238 RVLEKNYP 245


>gi|308187866|ref|YP_003931997.1| UPF0169 lipoprotein yfiO precursor [Pantoea vagans C9-1]
 gi|308058376|gb|ADO10548.1| putative UPF0169 lipoprotein yfiO precursor [Pantoea vagans C9-1]
          Length = 274

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 97/229 (42%), Gaps = 17/229 (7%)

Query: 35  LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94
           LVG     S D   DS        E+Y  A   L++ NF  A +        +PF   ++
Sbjct: 48  LVGCS--GSNDAVPDSPP-----SEIYATAQQKLQDGNFKAAIKQLEALDNRYPFGPYSQ 100

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM---------- 144
           +  L   +  Y       A +    ++   P   N+DYV Y+ G++   +          
Sbjct: 101 QVQLDLIYAYYKNADLPLAQAAIARFMRLNPTHPNIDYVIYMKGLTDMALDDSALQGFFG 160

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
           I     D    +   +  S+++  Y NS Y   A+  +   +++LA  E+ + ++Y KR 
Sbjct: 161 IDRSDRDPTHARDAFRDFSQLLRSYPNSQYAADAQKRLVYLKDRLAKYELSVAQFYTKRE 220

Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            YVA + R + ++ +Y D +   +A+  +  AY  L L  EA +V  +I
Sbjct: 221 AYVAVVNRVEGMMRDYPDTQATHDALPLMENAYRNLQLNAEADKVAKII 269


>gi|283835693|ref|ZP_06355434.1| competence lipoprotein ComL [Citrobacter youngae ATCC 29220]
 gi|291068910|gb|EFE07019.1| competence lipoprotein ComL [Citrobacter youngae ATCC 29220]
          Length = 245

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/206 (22%), Positives = 88/206 (42%), Gaps = 10/206 (4%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            E+Y  A   L++ N+ +A          +PF   +++  L   +  Y       A +  
Sbjct: 33  NEIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAI 92

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVE 167
           + +I   P   N+DYV Y+ G++   +          +     D +  +      S++V 
Sbjct: 93  DRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVR 152

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y NS Y   A   +   +++LA  E  +  YY  RG +VA + R + +L +Y D +   
Sbjct: 153 GYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARGAWVAVVNRVEGMLRDYPDTQATR 212

Query: 228 EAMARLVEAYVALALMDEAREVVSLI 253
           +A+  +  AY  + +  +A +V  +I
Sbjct: 213 DALPLMENAYRQMQMNAQAEKVAKII 238


>gi|296104264|ref|YP_003614410.1| putative lipoprotein [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295058723|gb|ADF63461.1| putative lipoprotein [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 245

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 45/205 (21%), Positives = 89/205 (43%), Gaps = 10/205 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y  A   L++ N+ +A          +PF   +++  L   +  Y       A +  +
Sbjct: 34  EIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQATID 93

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168
            ++   P   N+DYV Y+ G++   +          +     D +  +      S++V  
Sbjct: 94  RFMRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARDAFNDFSKLVRG 153

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS YV  A   +   +++LA  E  +  YY +RG +VA + R + +L +Y D +   +
Sbjct: 154 YPNSQYVTDATKRLVFLKDRLAKYEYSVAEYYTRRGAWVAVVNRVEGMLRDYPDTQATRD 213

Query: 229 AMARLVEAYVALALMDEAREVVSLI 253
            +  +  AY  + +  +A +V  +I
Sbjct: 214 GLKLMENAYRQMQMTAQADKVAKII 238


>gi|157148107|ref|YP_001455426.1| outer membrane protein assembly complex subunit YfiO [Citrobacter
           koseri ATCC BAA-895]
 gi|157085312|gb|ABV14990.1| hypothetical protein CKO_03917 [Citrobacter koseri ATCC BAA-895]
          Length = 245

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 45/205 (21%), Positives = 88/205 (42%), Gaps = 10/205 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y  A   L++ N+ +A          +PF   +++  L   +  Y       A +  +
Sbjct: 34  EIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168
            +I   P   N+DYV Y+ G++   +          +     D +  +      S++V  
Sbjct: 94  RFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVRS 153

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS Y   A   +   +++LA  E  +  YY  RG +VA + R + +L ++ D +   +
Sbjct: 154 YPNSQYTTDATKRLVFLKDRLAKYEYSVADYYTARGAWVAVVNRVEGMLRDFPDTQATRD 213

Query: 229 AMARLVEAYVALALMDEAREVVSLI 253
           A+  +  AY  + +  +A +V  +I
Sbjct: 214 ALPLMENAYRQMQMTTQADKVAKII 238


>gi|295097163|emb|CBK86253.1| outer membrane assembly lipoprotein YfiO [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 245

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 44/205 (21%), Positives = 89/205 (43%), Gaps = 10/205 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y  A   L++ N+ +A          +PF   +++  L   +  Y       A +  +
Sbjct: 34  EIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQATID 93

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168
            ++   P   N+DYV Y+ G++   +          +     D +  +      S++V  
Sbjct: 94  RFMRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARDAFNDFSKLVRS 153

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS Y+  A   +   +++LA  E  +  YY +RG +VA + R + +L +Y D +   +
Sbjct: 154 YPNSQYITDATKRLVFLKDRLAKYEYSVAEYYTRRGAWVAVVNRVEGMLRDYPDTQATRD 213

Query: 229 AMARLVEAYVALALMDEAREVVSLI 253
            +  +  AY  + +  +A +V  +I
Sbjct: 214 GLKLMENAYRQMQMTAQADKVAKII 238


>gi|89075040|ref|ZP_01161481.1| hypothetical protein SKA34_21630 [Photobacterium sp. SKA34]
 gi|89049127|gb|EAR54692.1| hypothetical protein SKA34_21630 [Photobacterium sp. SKA34]
          Length = 242

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 104/241 (43%), Gaps = 17/241 (7%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           LTI   +AV  L G    SS++   D + DV     +Y  A   L++ N++ A E     
Sbjct: 4   LTITTLLAVALLSGC---SSKE---DVIPDVP-PSNLYATAQTALQKGNWTSAIEQLEAL 56

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +PF   + +  L   +  Y +       +  E ++   P+    D+V Y+ G+++  
Sbjct: 57  DSRYPFGAYSDQVQLDLIYAYYKSDDLALGEATIERFLRLNPDHPQADWVVYMRGLTHMA 116

Query: 144 MIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
             R   +D             ++   +    ++ERY  S Y   A+  +   +N+LA  +
Sbjct: 117 QDRSFMHDMFNINRFDRDPTPSRQAFKDFKYLLERYPESEYSADAKTRMIFLKNRLANYD 176

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +    +Y++R  ++AAI R Q +   YSD E A +++A    AY  L L  E      L+
Sbjct: 177 LATVDFYIRREAWIAAINRCQQIQRLYSDTEAARQSLALEKTAYEKLNLQKEVERTDKLM 236

Query: 254 Q 254
           +
Sbjct: 237 K 237


>gi|258620373|ref|ZP_05715411.1| putative lipoprotein [Vibrio mimicus VM573]
 gi|258624746|ref|ZP_05719680.1| putative lipoprotein [Vibrio mimicus VM603]
 gi|262172217|ref|ZP_06039895.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio mimicus MB-451]
 gi|258583033|gb|EEW07848.1| putative lipoprotein [Vibrio mimicus VM603]
 gi|258587252|gb|EEW11963.1| putative lipoprotein [Vibrio mimicus VM573]
 gi|261893293|gb|EEY39279.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio mimicus MB-451]
          Length = 241

 Score = 62.8 bits (151), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/216 (23%), Positives = 93/216 (43%), Gaps = 11/216 (5%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D V DV    E+Y +A   L+   +  A E        +PF   + +  L   +  Y   
Sbjct: 23  DVVPDVP-PSELYSEAQSALQSGTWLTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKND 81

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLM 158
                 +  E +    P  + +D+V Y+ G+++    R+  +D              K  
Sbjct: 82  DLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNVDRSDRDPEPVKSA 141

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
                ++++RY NSPY + A+  +   +N+LA  ++    +YL+R  ++AAI R Q +  
Sbjct: 142 FADFKKLLQRYPNSPYAEDAQRRMYALKNRLAEYDLATADFYLRREAWIAAINRTQELQK 201

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
            + D E A +A+   +EAY  L + +       L++
Sbjct: 202 TFPDTEAARKALDIQLEAYQQLGMTEAVERTEQLMK 237


>gi|304399172|ref|ZP_07381039.1| outer membrane assembly lipoprotein YfiO [Pantoea sp. aB]
 gi|304353226|gb|EFM17606.1| outer membrane assembly lipoprotein YfiO [Pantoea sp. aB]
          Length = 243

 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 51/215 (23%), Positives = 94/215 (43%), Gaps = 11/215 (5%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D+V D     E+Y  A   L++ NF  A +        +PF   +++  L   +  Y   
Sbjct: 25  DAVPD-NPPSEIYATAQQKLQDGNFKAAIKQLEALDNRYPFGPYSQQVQLDLIYAYYKNA 83

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLM 158
               A +    ++   P   N+DYV Y+ G++   +          I     D    +  
Sbjct: 84  DLPLAQAAIARFMRLNPTHPNIDYVIYMKGLTDMALDDSALQGFFGIDRSDRDPTHARDA 143

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
            +  S+++  Y NS Y   A+  +   +++LA  E+ + ++Y KR  YVA + R + ++ 
Sbjct: 144 FRDFSQLLRNYPNSQYAADAQKRLVYLKDRLAKYELSVAQFYTKREAYVAVVNRVEGMMR 203

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +Y D +   +A+  +  AY  L L  EA +V  +I
Sbjct: 204 DYPDTQATHDALPLMENAYRNLQLNAEADKVAKII 238


>gi|152971445|ref|YP_001336554.1| outer membrane protein assembly complex subunit YfiO [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|206576804|ref|YP_002237067.1| outer membrane assembly lipoprotein YfiO [Klebsiella pneumoniae
           342]
 gi|238896041|ref|YP_002920777.1| outer membrane protein assembly complex subunit YfiO [Klebsiella
           pneumoniae NTUH-K2044]
 gi|262043839|ref|ZP_06016929.1| competence lipoprotein ComL [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|290510911|ref|ZP_06550280.1| lipoprotein [Klebsiella sp. 1_1_55]
 gi|330012969|ref|ZP_08307539.1| outer membrane assembly lipoprotein YfiO [Klebsiella sp. MS 92-3]
 gi|150956294|gb|ABR78324.1| putative lipoprotein [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|206565862|gb|ACI07638.1| outer membrane assembly lipoprotein YfiO [Klebsiella pneumoniae
           342]
 gi|238548359|dbj|BAH64710.1| putative lipoprotein [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
 gi|259038809|gb|EEW39990.1| competence lipoprotein ComL [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|289775904|gb|EFD83903.1| lipoprotein [Klebsiella sp. 1_1_55]
 gi|328533635|gb|EGF60347.1| outer membrane assembly lipoprotein YfiO [Klebsiella sp. MS 92-3]
          Length = 245

 Score = 62.4 bits (150), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 45/206 (21%), Positives = 90/206 (43%), Gaps = 10/206 (4%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            E+Y  A   L++ N+ +A          +PF   +++  L   +  Y       A +  
Sbjct: 33  NEIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAI 92

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVE 167
           + ++   P   N+DYV Y+ G++   +          +     D +  +      S++V 
Sbjct: 93  DRFMRLNPTHPNIDYVIYMRGLTNMALDDSALQGFFGVDRSDRDPQHARDAFNDFSKLVR 152

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y NS Y   A   +   +++LA  E+ +  YY  RG +VA + R + ++ NY D +   
Sbjct: 153 GYPNSQYATDAYKRMVFLKDRLAKYELSVVDYYTDRGAWVAVVNRVEGMMRNYPDTQATR 212

Query: 228 EAMARLVEAYVALALMDEAREVVSLI 253
           +A+ ++  AY  + +  +A +V  +I
Sbjct: 213 DALPKMENAYRQMQMNAQADKVAKII 238


>gi|297180027|gb|ADI16252.1| DNA uptake lipoprotein [uncultured bacterium HF0010_16H03]
          Length = 245

 Score = 62.4 bits (150), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 105/252 (41%), Gaps = 30/252 (11%)

Query: 20  YKFALTIFF--SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           +K  L  FF  SI   F+VG           D     + ++  Y+ A   ++ +N+  A 
Sbjct: 3   HKLNLKFFFCLSITALFMVGCNS--------DGPEIEQPEKIYYDLAQKRIQSKNYIAAI 54

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           E        +PF   A ++ +   +  +  G+   A +  E++I  +P   N+DY Y + 
Sbjct: 55  ESLQAIETRYPFGRYAEQAQIELIYAYFMNGENLAAHAAAEKFIRLHPRHPNIDYAYLMK 114

Query: 138 GMSYAQMIRDVPYDQRAT------------KLMLQYMSRIVERYTNS---PYVKGARFYV 182
           G+S     RD  +  R T            K     +S  + R+  S   PY K    Y+
Sbjct: 115 GLS--SYTRDTSFLVRVTDTDIANRDITGAKESFAELSEFLTRFPESQYSPYAKQRNIYL 172

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
              RN +A  E+    YY+  G Y+AA+ R + V+ N  ++     A+  L E+Y  L  
Sbjct: 173 ---RNMIARNELSAADYYVSIGAYIAAVRRAKYVIENIPNSSENLRALVILKESYKNLGY 229

Query: 243 MDEAREVVSLIQ 254
           ++   +V  +I 
Sbjct: 230 LELYEDVERIID 241


>gi|288934029|ref|YP_003438088.1| outer membrane assembly lipoprotein YfiO [Klebsiella variicola
           At-22]
 gi|288888758|gb|ADC57076.1| outer membrane assembly lipoprotein YfiO [Klebsiella variicola
           At-22]
          Length = 245

 Score = 62.4 bits (150), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 45/206 (21%), Positives = 90/206 (43%), Gaps = 10/206 (4%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            E+Y  A   L++ N+ +A          +PF   +++  L   +  Y       A +  
Sbjct: 33  NEIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAI 92

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVE 167
           + ++   P   N+DYV Y+ G++   +          +     D +  +      S++V 
Sbjct: 93  DRFMRLNPTHPNIDYVIYMRGLTNMALDDSALQGFFGVDRSDRDPQHARDAFNDFSKLVR 152

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y NS Y   A   +   +++LA  E+ +  YY  RG +VA + R + ++ NY D +   
Sbjct: 153 GYPNSQYATDAFKRMVFLKDRLAKYELSVVDYYTDRGAWVAVVNRVEGMMRNYPDTQATR 212

Query: 228 EAMARLVEAYVALALMDEAREVVSLI 253
           +A+ ++  AY  + +  +A +V  +I
Sbjct: 213 DALPKMENAYRQMQMNAQADKVAKII 238


>gi|226953431|ref|ZP_03823895.1| DNA uptake lipoprotein-like protein [Acinetobacter sp. ATCC 27244]
 gi|294649579|ref|ZP_06726998.1| competence protein [Acinetobacter haemolyticus ATCC 19194]
 gi|226835814|gb|EEH68197.1| DNA uptake lipoprotein-like protein [Acinetobacter sp. ATCC 27244]
 gi|292824518|gb|EFF83302.1| competence protein [Acinetobacter haemolyticus ATCC 19194]
          Length = 329

 Score = 62.4 bits (150), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 111/252 (44%), Gaps = 24/252 (9%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQ 82
           L +   +A  F VG     S+   +D       Q  VY EKA+  L+   ++ A +    
Sbjct: 11  LALSLGVASAF-VGCSSNPSKKEVVDKGPQSSEQ--VYFEKALKSLERNQYTDAVKSLEA 67

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG---- 138
               FP     +++ L   + ++    Y+   +L + +I   P+  NVDY YY+ G    
Sbjct: 68  LDTYFPTGQYTQQAQLELLYAKFKQKDYEGTIALADRFIRLNPQHPNVDYAYYVRGVANM 127

Query: 139 -MSYAQMI---------RDVPYDQRATKLMLQYMSRIVERYTNSPY-VKGARFYVTVGRN 187
            M+Y  +I         RDV Y     K+  Q    ++ R+ +S Y V  A+    +G+ 
Sbjct: 128 EMNYDSLIRYTSLKQAHRDVSY----IKVAYQNFVDLIRRFPSSQYSVDAAQRMKYIGQ- 182

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
           +LA  E+   R+ ++R  ++AA  R + VL  Y       EA+A L  +Y  L     ++
Sbjct: 183 ELAESEMNAARFNIQRKAWLAAAERARWVLEYYPQTPQTPEALATLAYSYQQLGDKATSQ 242

Query: 248 EVVSLIQERYPQ 259
           + + +++  YP 
Sbjct: 243 QYIEILKLNYPN 254


>gi|110806534|ref|YP_690054.1| outer membrane protein assembly complex subunit YfiO [Shigella
           flexneri 5 str. 8401]
 gi|110616082|gb|ABF04749.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
          Length = 245

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 46/205 (22%), Positives = 88/205 (42%), Gaps = 10/205 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y  A   L++ N+ +A          +PF   +++  L   +  Y       A +  +
Sbjct: 34  EIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168
            +I   P   N+DYV Y+ G++   +          +     D +  +      S++V  
Sbjct: 94  RFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRG 153

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS Y   A   +   + +LA  E  +  YY +RG +VA + R + +L +Y D +   +
Sbjct: 154 YPNSQYTTDATKRLVFLKGRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRD 213

Query: 229 AMARLVEAYVALALMDEAREVVSLI 253
           A+  +  AY  + +  +A +V  +I
Sbjct: 214 ALPLMENAYRQMQMNAQAEKVAKII 238


>gi|168239431|ref|ZP_02664489.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
 gi|194736160|ref|YP_002115674.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|194711662|gb|ACF90883.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|197287865|gb|EDY27253.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
          Length = 245

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 46/206 (22%), Positives = 88/206 (42%), Gaps = 10/206 (4%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            E+Y  A   L++ N+ +A          +PF   +++  L   +  Y       A +  
Sbjct: 33  NEIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAI 92

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVE 167
           + ++   P   N+DYV Y+ G++   +          +     D +  +      S++V 
Sbjct: 93  DRFMRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVR 152

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y +S Y   A   +   +++LA  E  +  YY  RG +VA + R + +L NY D +   
Sbjct: 153 SYPHSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATR 212

Query: 228 EAMARLVEAYVALALMDEAREVVSLI 253
           +A+  +  AY  + L  +A +V  +I
Sbjct: 213 DALPLMENAYRQMQLNAQADKVAKII 238


>gi|237729510|ref|ZP_04559991.1| outer membrane protein assembly complex subunit YfiO [Citrobacter
           sp. 30_2]
 gi|226908116|gb|EEH94034.1| outer membrane protein assembly complex subunit YfiO [Citrobacter
           sp. 30_2]
          Length = 245

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 46/206 (22%), Positives = 87/206 (42%), Gaps = 10/206 (4%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            E+Y  A   L++ N+ +A          +PF   +++  L   +  Y       A +  
Sbjct: 33  NEIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAI 92

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVE 167
           + +I   P   N+DYV Y+ G++   +          +     D +  +      S++V 
Sbjct: 93  DRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVR 152

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y NS Y   A   +   +++LA  E  +  YY  RG +VA + R + +L +Y D +   
Sbjct: 153 GYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARGAWVAVVNRVEGMLRDYPDTQATR 212

Query: 228 EAMARLVEAYVALALMDEAREVVSLI 253
            A+  +  AY  + +  +A +V  +I
Sbjct: 213 NALPLMENAYRQMQMNAQAEKVAKII 238


>gi|148978561|ref|ZP_01815013.1| putative lipoprotein [Vibrionales bacterium SWAT-3]
 gi|145962350|gb|EDK27631.1| putative lipoprotein [Vibrionales bacterium SWAT-3]
          Length = 242

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 103/241 (42%), Gaps = 17/241 (7%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           LT+   +AV  L G    S+ ++  D    V     +Y +A   L+  ++  A E     
Sbjct: 4   LTLAGLLAVSLLAGC--SSTEEIVPDVPPSV-----LYSEAQESLQSGSWLSAIEKLEAL 56

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +PF   + +  L   +  Y         +    ++   P  +  D+V Y+ G+++  
Sbjct: 57  DSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATISRFLRLNPTHEKQDWVLYMRGLTHMA 116

Query: 144 MIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
             R+  +D              KL      R++ER+  SPY + A+  +   +N+LA  +
Sbjct: 117 QDRNFMHDIFNIDRSDRDPEPVKLAFADFKRLLERFPASPYAEDAQKRMFALKNRLADYD 176

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +    +YL+R  ++AAI R Q +   Y D   A +++   +EAY  L L D  +   +LI
Sbjct: 177 LATADFYLRREAWIAAINRTQELQKTYPDTIAARKSLKIQLEAYKQLGLEDAIQRTEALI 236

Query: 254 Q 254
           +
Sbjct: 237 E 237


>gi|260598976|ref|YP_003211547.1| outer membrane biogenesis protein BamD [Cronobacter turicensis
           z3032]
 gi|260218153|emb|CBA32978.1| UPF0169 lipoprotein yfiO [Cronobacter turicensis z3032]
          Length = 229

 Score = 62.0 bits (149), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 88/205 (42%), Gaps = 10/205 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y  A   L++ N+  A          +PF   +++  L   +  Y       A +  +
Sbjct: 18  EIYATAQQKLQDGNWKAAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 77

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168
            +I   P   N+DYV Y+ G++   +          +     D +  +   +  S++V  
Sbjct: 78  RFIRLNPTHPNIDYVIYMRGLTNMALDDSALQGFFGVDRSDRDPQHARDAFRDFSKLVRG 137

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y  S Y   A   +   +++L+  E+ + +YY KRG +VA + R   +L +Y D +   E
Sbjct: 138 YPQSQYSTDATKRLVYLKDRLSKYELSVAQYYTKRGAWVAVVNRVDGMLRDYPDTQATHE 197

Query: 229 AMARLVEAYVALALMDEAREVVSLI 253
            +  +  AY  L L  +A +V  +I
Sbjct: 198 GLGLMENAYRELQLNAQADKVAKII 222


>gi|82545048|ref|YP_408995.1| outer membrane protein assembly complex subunit YfiO [Shigella
           boydii Sb227]
 gi|81246459|gb|ABB67167.1| conserved hypothetical protein [Shigella boydii Sb227]
 gi|332092137|gb|EGI97215.1| outer membrane assembly lipoprotein YfiO [Shigella boydii 3594-74]
          Length = 245

 Score = 62.0 bits (149), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 45/205 (21%), Positives = 89/205 (43%), Gaps = 10/205 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y  A   L++ N+ +A          +PF   +++  L   +  Y       A +  +
Sbjct: 34  EIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168
            +I   P   N+DYV Y+ G++   +          +     D +  +      S++V  
Sbjct: 94  RFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRG 153

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS Y   A   +   +++LA  E  +  YY +RG +VA + R + +L +Y D +   +
Sbjct: 154 YPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRD 213

Query: 229 AMARLVEAYVALALMDEAREVVSLI 253
           A+  +  +Y  + +  +A +V  +I
Sbjct: 214 ALPLMENSYRQMQMNAQAEKVAKII 238


>gi|269101903|ref|ZP_06154600.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Photobacterium
           damselae subsp. damselae CIP 102761]
 gi|268161801|gb|EEZ40297.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Photobacterium
           damselae subsp. damselae CIP 102761]
          Length = 242

 Score = 62.0 bits (149), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 103/232 (44%), Gaps = 17/232 (7%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           LT+   +AV  L G    S+ +V    V DV    E+Y  A   L+  N+S+A E     
Sbjct: 4   LTLTTLLAVAILSGCS--STEEV----VPDVP-PSELYATAQESLQSGNWSQAIERLETL 56

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +PF   + +  L   +  Y       + +    ++   P +   D+V Y++G+++  
Sbjct: 57  DSRYPFGAYSDQVQLDLIYAYYKNDDLAMSEATINRFMRLNPINPKSDWVLYMLGLTHMA 116

Query: 144 MIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
             R   +D            A +   +    +++RY NS Y   A+  +   +N+LA  +
Sbjct: 117 QDRSFMHDLFNVDRSDRDPTAARQAFRDFQVLLQRYPNSEYSADAKARMVFLKNRLANYD 176

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
           + +  +Y++RG ++AAI R + V   Y D E A +++    +AY  L +  E
Sbjct: 177 LAVADFYIRRGAWIAAINRCEQVQRLYDDTEAARKSLLLEKKAYEKLGMQKE 228


>gi|299771332|ref|YP_003733358.1| DNA uptake lipoprotein [Acinetobacter sp. DR1]
 gi|298701420|gb|ADI91985.1| DNA uptake lipoprotein [Acinetobacter sp. DR1]
          Length = 387

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 108/251 (43%), Gaps = 22/251 (8%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L +   +A  F VG     S+   +DS      Q   +EKA   L    +  A +     
Sbjct: 11  LALSLGVASAF-VGCSSNPSKKEVVDSGPQSSEQ-AYFEKAQKSLDRGQYLDATKSLEAI 68

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS--- 140
              +P    A+++ L   + ++    Y+ A +L E +I   P+  NVDY YY+  +S   
Sbjct: 69  DTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYVRAVSNME 128

Query: 141 -----------YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY-VKGARFYVTVGRNQ 188
                        Q  RDV Y     K+  Q    ++ R+ +S Y V  A+    +G+ +
Sbjct: 129 QNYDSLMRYTSLQQSHRDVSY----LKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQ-E 183

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E+   R+ +KR  ++AA  R Q V+ +Y       EA+A L  +Y  L     +++
Sbjct: 184 LAENEMTAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYNQLGDKATSQQ 243

Query: 249 VVSLIQERYPQ 259
            + +++  YP 
Sbjct: 244 YIEVLKLNYPN 254


>gi|126640892|ref|YP_001083876.1| putative competence protein (ComL) [Acinetobacter baumannii ATCC
           17978]
          Length = 364

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 89/187 (47%), Gaps = 20/187 (10%)

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI- 145
           +P    A+++ L   + ++    Y+ A +L E +I   P+  NVDY YY+ G+S  +M  
Sbjct: 51  YPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYVRGVSNMEMNY 110

Query: 146 -------------RDVPYDQRATKLMLQYMSRIVERYTNSPY-VKGARFYVTVGRNQLAA 191
                        RDV Y     K+  Q    ++ R+ +S Y V  A+    +G+ +LA 
Sbjct: 111 DSLLRYTSLQQSHRDVSY----LKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQ-ELAE 165

Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
            E+   R+ +KR  ++AA  R Q V+ +Y       EA+A L  +Y  L     +++ + 
Sbjct: 166 SEMNAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYDQLGDKATSQQYIE 225

Query: 252 LIQERYP 258
           +++  YP
Sbjct: 226 VLKLNYP 232


>gi|157376632|ref|YP_001475232.1| putative lipoprotein [Shewanella sediminis HAW-EB3]
 gi|157319006|gb|ABV38104.1| putative lipoprotein [Shewanella sediminis HAW-EB3]
          Length = 282

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 85/211 (40%), Gaps = 10/211 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y +A   ++  NFSKA          +PF     +  L   F  Y         +  + 
Sbjct: 67  LYSQARTSMELGNFSKAVRSLEALDSRYPFGPHKTQVQLDLIFAYYKLDDAASGIANIDR 126

Query: 120 YITQYPESKNVDYVYYLVGMSYAQ----MIRDV------PYDQRATKLMLQYMSRIVERY 169
           +I   P  K++DYVYY+ G+   Q    M  D+        D +  +       R+++ Y
Sbjct: 127 FIRLNPTHKDIDYVYYMRGLVNMQSDNYMFHDMLDIDRTDRDPKVAQDAFNDFDRLIKSY 186

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
             S Y   A   +   +N+LA   + +  YY+K   + AA  R Q V+  Y      E A
Sbjct: 187 PKSKYAPDAAKRMLYLKNRLAKYSINVAEYYIKMNAWSAASTRAQSVMETYPGTTSTERA 246

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260
           +  + EAY  L        V+S+++  +P  
Sbjct: 247 LEIMAEAYGELGQEKLRENVLSVMKINFPNN 277


>gi|88811116|ref|ZP_01126372.1| probable transmembrane protein [Nitrococcus mobilis Nb-231]
 gi|88791655|gb|EAR22766.1| probable transmembrane protein [Nitrococcus mobilis Nb-231]
          Length = 251

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 13/212 (6%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y+KA   L   ++  A +        +PF   + ++ L   +  Y A     A +  + 
Sbjct: 34  LYDKARELLDAGDYMAAVKRLEDLQAQYPFGPYSEQAQLNIIYAYYKANDTVSAVAAADR 93

Query: 120 YITQYPESKNVDYVYYLVG-------MSYAQMIRDVPYDQRATKLMLQ--YMSR-IVERY 169
           +I   P    V Y YY+ G       + + Q +  +   +R  + + Q  Y  R ++E Y
Sbjct: 94  FIRFNPRHAKVAYAYYMKGVAQQEQGLGFIQSLLHMDRAKRDPEPLRQAFYSFRSLLEAY 153

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
             S Y   AR  +   R+ LA  E++I +YY++RG +VAAI R + V+ +Y+      EA
Sbjct: 154 PESRYADDARQRMAQLRDLLAQHELQICQYYIRRGAWVAAINRARSVVLDYAGTPAVAEA 213

Query: 230 MARLVEAYVAL---ALMDEAREVVSLIQERYP 258
           +  L++ Y  +   AL ++ R V+ L    +P
Sbjct: 214 LHLLLQGYQHIELPALKEDVRRVLRLNYPHHP 245


>gi|320157326|ref|YP_004189705.1| putative component of the lipoprotein assembly complex [Vibrio
           vulnificus MO6-24/O]
 gi|319932638|gb|ADV87502.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT, YfgL, and NlpB) [Vibrio vulnificus
           MO6-24/O]
          Length = 241

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 88/206 (42%), Gaps = 10/206 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y +A   L+  N+  A E        +PF   + +  L   +  Y         +   
Sbjct: 32  ELYAEAQTSLQGGNWLTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIS 91

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVER 168
            +    P  + +D+V Y+ G+++    R+  +D              K       +++ER
Sbjct: 92  RFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRSDRDPEPVKQAFDDFKKLLER 151

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y +SPY + ++  +   +N+LA  ++    YYL+R  ++AAI R Q +   Y D   A +
Sbjct: 152 YPSSPYAEDSQKRMFALKNRLAEYDLATADYYLRREAWIAAINRSQELQKTYPDTIAARK 211

Query: 229 AMARLVEAYVALALMDEAREVVSLIQ 254
           ++   +EAY  L L D       LI+
Sbjct: 212 SLKIQLEAYKQLGLQDAIARTEELIR 237


>gi|262163885|ref|ZP_06031624.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio mimicus VM223]
 gi|262027413|gb|EEY46079.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio mimicus VM223]
          Length = 214

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/206 (22%), Positives = 89/206 (43%), Gaps = 10/206 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y +A   L+   +  A E        +PF   + +  L   +  Y         +  E
Sbjct: 5   ELYSEAQSALQSGTWLTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIE 64

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVER 168
            +    P  + +D+V Y+ G+++    R+  +D              K       ++++R
Sbjct: 65  RFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNVDRSDRDPEPVKSAFADFKKLLQR 124

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NSPY + A+  +   +N+LA  ++    +YL+R  ++AAI R Q +   + D E A +
Sbjct: 125 YPNSPYAEDAQRRMYALKNRLAEYDLATADFYLRREAWIAAINRTQELQKTFPDTEAARK 184

Query: 229 AMARLVEAYVALALMDEAREVVSLIQ 254
           A+   +EAY  L + +       L++
Sbjct: 185 ALDIQLEAYQQLGMTEAVERTEQLMK 210


>gi|162451869|ref|YP_001614236.1| hypothetical protein sce3596 [Sorangium cellulosum 'So ce 56']
 gi|161162451|emb|CAN93756.1| hypothetical protein sce3596 [Sorangium cellulosum 'So ce 56']
          Length = 285

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 8/206 (3%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           R  Y +A+   + +++  A   F +  R FP++  AR + L  A + +  GKY +A S  
Sbjct: 42  RAAYNEAMAAFQAKDWEDARALFGEVKRLFPYSRYARLADLRIADLDFEQGKYPEAISEY 101

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDV----PYDQRATKLMLQYMSRI---VERYT 170
             +I ++   +NV+Y  Y +  +    I D     P ++R     L+    I   + +Y 
Sbjct: 102 RAFIQEHRTDRNVEYAKYRMAKALYLDIDDTVFLPPAEERDQATTLEAYKEIRTFLRQYP 161

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            S Y + A + + V   +L   E+ + RYYLK   + AA+ R    L  +  +    EA+
Sbjct: 162 RSRYREDAAYMLEVVTGRLVRHELYVARYYLKEDAFDAALARIDYALRTFPGSGLDPEAL 221

Query: 231 ARLVEAYVALALMDEAREVV-SLIQE 255
               E  + +   DEAR V  S+I++
Sbjct: 222 VLKGETLLKMKKPDEARAVFESVIRD 247


>gi|291618566|ref|YP_003521308.1| YfiO [Pantoea ananatis LMG 20103]
 gi|291153596|gb|ADD78180.1| YfiO [Pantoea ananatis LMG 20103]
 gi|327394947|dbj|BAK12369.1| UPF0169 lipoprotein YfiO precursor [Pantoea ananatis AJ13355]
          Length = 243

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 93/215 (43%), Gaps = 11/215 (5%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D+V D     E+Y  A   L++ NF  A +        +PF   +++  L   +  Y   
Sbjct: 25  DAVPD-NPPSEIYATAQQKLQDGNFKAAIKQLEALDNRYPFGPYSQQVQLDLIYAYYKNA 83

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLM 158
               A +    ++   P   N+DYV Y+ G++   +          I     D    +  
Sbjct: 84  DLPMAQAAISRFMRLNPTHPNIDYVIYMKGLTDMALDDSALQGFFGIDRSDRDPTHARDA 143

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
            +  ++++  Y NS Y   A       +++L+  E+ + ++Y KRG YVA + R + ++ 
Sbjct: 144 FRDFAQLLRSYPNSQYAADAYKRQVYLKDRLSKYELSVAQFYTKRGAYVAVVNRVEGMMR 203

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +Y D +   +A+  +  AY  L L  EA +V  +I
Sbjct: 204 DYPDTQATHDALPLMENAYRQLQLNAEADKVAKII 238


>gi|293448947|ref|ZP_06663368.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli B088]
 gi|291322037|gb|EFE61466.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli B088]
          Length = 245

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/205 (21%), Positives = 88/205 (42%), Gaps = 10/205 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y  A   L++ N+ +A          +PF   +++  L   +  Y       A +  +
Sbjct: 34  EIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168
            +I   P   N+DYV Y+ G++   +          +     D +  +      S++   
Sbjct: 94  RFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLARG 153

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS Y   A   +   +++LA  E  +  YY +RG +VA + R + +L +Y D +   +
Sbjct: 154 YPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRD 213

Query: 229 AMARLVEAYVALALMDEAREVVSLI 253
           A+  +  AY  + +  +A +V  +I
Sbjct: 214 ALPLMENAYRQMQMNAQAEKVAKII 238


>gi|42521763|ref|NP_967143.1| competence protein ComL [Bdellovibrio bacteriovorus HD100]
 gi|39574293|emb|CAE77797.1| Competence protein ComL [Bdellovibrio bacteriovorus HD100]
          Length = 245

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 1/165 (0%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           K + + +A   + +    FP++  A KS L  A V Y    Y +A    + +   +P   
Sbjct: 42  KSERYEEAIRRYTEVKNKFPYSNFATKSELAIADVYYKQESYAEAQVSYQMFKELHPTVP 101

Query: 129 NVDYVYYLVGMS-YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           N DYV + +GMS Y Q+   +  D       +  +S ++++Y NS +V  A+   T    
Sbjct: 102 NSDYVQFRIGMSYYNQLPSTIDRDLTLANDTILNLSDLIKKYPNSEFVNEAKEKRTAAIR 161

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
            LA KE  I  +Y KR  + +A+ R++ +  NY       +A++R
Sbjct: 162 MLAEKEEYIADFYFKRKIFDSALGRYEGLYNNYRGLGFDAKALSR 206


>gi|33519651|ref|NP_878483.1| putative lipoprotein [Candidatus Blochmannia floridanus]
 gi|33517314|emb|CAD83699.1| DNA uptake lipoprotein [Candidatus Blochmannia floridanus]
          Length = 246

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/249 (19%), Positives = 105/249 (42%), Gaps = 26/249 (10%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
            AL +  +I+ C  +   +   +D              +Y+ A   L + N+++A +   
Sbjct: 9   LALNMIMTIS-CTTISHHKIPDQDT-----------NHLYKIAYNKLLQNNYTEAIQDLL 56

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
                + F    ++  L   +  Y +     A +    ++  YP  KN+DYV Y+ G+  
Sbjct: 57  YLKNLYLFEPCPQQIYLDLIYAYYKSNDLTSANNCINHFLNVYPNHKNLDYVLYIHGIIN 116

Query: 142 AQMIRDVPY--------------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
             + R+ P+              +     +     S++++ Y NS Y   +   +   +N
Sbjct: 117 MHLDRNNPFPLLIKHLYTCWFNHNPIHANIAFHSFSKLIQNYPNSQYAPDSYKRLIFLKN 176

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
           ++A  ++ I ++Y K+  Y++ I R + +L  + D +   +A+  +  AY  + L+D+A 
Sbjct: 177 RIAYYKLAIIKFYDKKNAYISVITRSEEMLRYFPDTQATYQALHYMRRAYQNIHLIDQAN 236

Query: 248 EVVSLIQER 256
            +  +I E 
Sbjct: 237 IINQIITEN 245


>gi|90580376|ref|ZP_01236183.1| hypothetical protein VAS14_20631 [Vibrio angustum S14]
 gi|90438678|gb|EAS63862.1| hypothetical protein VAS14_20631 [Vibrio angustum S14]
          Length = 242

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 102/241 (42%), Gaps = 17/241 (7%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           LTI   +AV  L G    SS++  +  V        +Y  A   L++ N++ A E     
Sbjct: 4   LTITTLLAVALLSGC---SSKEEVIPDVP----PSNLYATAQTALQKGNWTSAIEQLEAL 56

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +PF   + +  L   +  Y +       +  E ++   P++   D+V Y+ G+++  
Sbjct: 57  DSRYPFGAYSDQVQLDLIYAYYKSDDLALGEATIERFLRLNPDNPQADWVVYMRGLTHMA 116

Query: 144 MIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
             R   +D             ++   +    ++ERY  S Y   A+  +   +N+LA  +
Sbjct: 117 QDRSFMHDMFNINRFDRDPTPSRQAFKDFKYLLERYPESEYGADAKARMIFLKNRLANYD 176

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +    +Y++R  ++AAI R Q +   Y D E A +++A    AY  L L  E      L+
Sbjct: 177 LSTADFYIRREAWIAAINRCQQIQRLYPDTEAARQSLALEKTAYEKLNLQKEVERTDKLM 236

Query: 254 Q 254
           +
Sbjct: 237 K 237


>gi|262280060|ref|ZP_06057845.1| competence lipoprotein comL [Acinetobacter calcoaceticus RUH2202]
 gi|262260411|gb|EEY79144.1| competence lipoprotein comL [Acinetobacter calcoaceticus RUH2202]
          Length = 387

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 112/257 (43%), Gaps = 24/257 (9%)

Query: 17  YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
           Y++   AL++  + A    VG     S+   +DS      Q   +EKA   L    +  A
Sbjct: 6   YKITMLALSLGLASA---FVGCSSNPSKKEVVDSGPQSSEQ-AYFEKAQKSLDRGQYLDA 61

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            +        +P    A+++ L   + ++    Y+ A +L E +I   P+  NVDY YY+
Sbjct: 62  TKSLEAIDTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYV 121

Query: 137 VGM--------------SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY-VKGARFY 181
             +              S  Q  RDV Y     K+  Q    ++ R+ +S Y V  A+  
Sbjct: 122 RAVANMEQNYDSLMRYTSLQQSHRDVSY----LKVAYQNFVDLIRRFPSSQYSVDAAQRM 177

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
             +G+ +LA  E+   R+ +KR  ++AA  R Q V+ +Y       EA+A L  +Y  L 
Sbjct: 178 KFIGQ-ELAENEMTAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYSQLG 236

Query: 242 LMDEAREVVSLIQERYP 258
               +++ + +++  YP
Sbjct: 237 DKATSQQYIEVLKLNYP 253


>gi|146312716|ref|YP_001177790.1| outer membrane protein assembly complex subunit YfiO [Enterobacter
           sp. 638]
 gi|145319592|gb|ABP61739.1| conserved hypothetical protein [Enterobacter sp. 638]
          Length = 245

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/205 (21%), Positives = 88/205 (42%), Gaps = 10/205 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y  A   L++ N+ +A          +PF   +++  L   +  Y       A +  +
Sbjct: 34  EIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQATID 93

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168
            ++   P   N+DYV Y+ G++   +          +     D +  +      S++V  
Sbjct: 94  RFMRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARDAFNDFSKLVRG 153

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS Y   A   +   +++LA  E  +  YY +RG +VA + R + +L +Y D +   +
Sbjct: 154 YPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTRRGAWVAVVNRVEGMLRDYPDTQATRD 213

Query: 229 AMARLVEAYVALALMDEAREVVSLI 253
            +  +  AY  + +  +A +V  +I
Sbjct: 214 GLKLMENAYRQMQMNAQAEKVAKII 238


>gi|170728052|ref|YP_001762078.1| putative lipoprotein [Shewanella woodyi ATCC 51908]
 gi|169813399|gb|ACA87983.1| putative lipoprotein [Shewanella woodyi ATCC 51908]
          Length = 268

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 86/211 (40%), Gaps = 10/211 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y +A   ++  N+SKA          +PF     +  L   +  Y         +  + 
Sbjct: 53  LYSQARTSMELGNYSKAVRSLEALDSRYPFGPHKTQVQLDLIYAYYKLDDPASGIANIDR 112

Query: 120 YITQYPESKNVDYVYYLVGMSYAQ----MIRDV------PYDQRATKLMLQYMSRIVERY 169
           +I   P  KN+DYVYY+ G+   Q    M  D+        D +  +   +   R+++ Y
Sbjct: 113 FIRLNPTHKNIDYVYYMRGLVNMQSDNYMFHDMLNIDRTDRDPKVAQDAFKDFDRLIKSY 172

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
            NS Y   A   +   +N+LA   + +  YY+K   + AA  R Q V+  +      E A
Sbjct: 173 PNSKYAPDAAKRMQQLKNRLAKYSINVAEYYIKMNAWSAAATRAQSVMETFPGTPSTERA 232

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260
           +  +  AY  L        V+S++Q  +P  
Sbjct: 233 LEIMSIAYGELGQAKLKENVLSVMQANFPNN 263


>gi|91794215|ref|YP_563866.1| putative lipoprotein [Shewanella denitrificans OS217]
 gi|91716217|gb|ABE56143.1| putative lipoprotein [Shewanella denitrificans OS217]
          Length = 253

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/254 (21%), Positives = 104/254 (40%), Gaps = 17/254 (6%)

Query: 17  YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
           Y+  K A  +  S+A+         S  D     + + +    +Y +A   ++  N+SKA
Sbjct: 2   YKFAKGAALVMLSLAITACSS----SPEDA---DIANKKSPEALYAQARTSMELGNYSKA 54

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
                     +PF     +  L   F  Y         +  + ++   P   N+DYV+Y+
Sbjct: 55  ARSLEALDSRYPFGPHKTQVQLDLIFAYYKMDDAASGLANIDRFLRLNPTHPNIDYVHYM 114

Query: 137 VGMSYAQM-------IRDVPYDQRATKLM---LQYMSRIVERYTNSPYVKGARFYVTVGR 186
            G++  Q        + D+    R TK      +   ++++ Y NS Y   A+  +   +
Sbjct: 115 RGLTNMQADNYLFHDMLDIDRTDRDTKNAQDAFKDFDKLIKSYPNSKYAADAQQRMQYLK 174

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
           N+LA   V +  YY+K   + AA  R Q V+  + +    E A+  + EAY  L      
Sbjct: 175 NRLANYSVIVAEYYIKMNAWSAAAVRAQTVMEKFPNTPSTERALEIMAEAYQELGQTQLK 234

Query: 247 REVVSLIQERYPQG 260
           + V+++++  +P  
Sbjct: 235 QNVLTVLKANFPSN 248


>gi|51244660|ref|YP_064544.1| hypothetical protein DP0808 [Desulfotalea psychrophila LSv54]
 gi|50875697|emb|CAG35537.1| hypothetical protein DP0808 [Desulfotalea psychrophila LSv54]
          Length = 265

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 109/248 (43%), Gaps = 35/248 (14%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKA-----VLFLKEQNF 73
           L+ FA+ I   IA+  L G          + S+ D+ Y++   E       +  +++ N 
Sbjct: 11  LHSFAIII---IAMSLLGGCAD-------MKSMFDITYEKPDLEFPANDLIIKGMEDYNV 60

Query: 74  SK---AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
            K   A  YF +    +PF+  A  + L +A   Y   KY +A +  +++  ++P ++ +
Sbjct: 61  GKYFGAISYFQEILEKYPFSPEAPLAELKAADCNYYMDKYPEALAQYQDFEDRHPTNEAI 120

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
            YV Y  GMS  + I  +  D    +  + + S+++  + NSPY   AR  +    + LA
Sbjct: 121 PYVMYQKGMSNYKQIDRIDRDPIVARRAVDFFSQLLRAFPNSPYTTNARKNIAEAISFLA 180

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
             E  +  +YL+  +Y                 E AE  +  L+ AY    ++ +A +++
Sbjct: 181 DHEFAVIEFYLRTEKY-----------------EQAETRLEYLITAYPNTNVIPKAEKIL 223

Query: 251 SLIQERYP 258
           + IQ   P
Sbjct: 224 AEIQAGNP 231


>gi|157962984|ref|YP_001503018.1| putative lipoprotein [Shewanella pealeana ATCC 700345]
 gi|157847984|gb|ABV88483.1| putative lipoprotein [Shewanella pealeana ATCC 700345]
          Length = 268

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 88/211 (41%), Gaps = 10/211 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y +A   ++  N+SKA          FPF     +  L   +  Y         +  + 
Sbjct: 53  LYSQARTSMELGNYSKAVRSLEALDSRFPFGPHKTQVQLDLIYAYYKLDDPASGIANIDR 112

Query: 120 YITQYPESKNVDYVYYLVGMSYAQ----MIRDV------PYDQRATKLMLQYMSRIVERY 169
           +I   P  K++DYVYY+ G+   Q    +  D+        D +A +       R+++ Y
Sbjct: 113 FIRLNPTHKDIDYVYYMRGLVNMQSDRYLFHDMLNIDRSDRDPKAAQDAFNDFDRLIKSY 172

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
            NS Y   A+  +   +N+LA   +++  YY+K   + AA  R Q VL  Y      E+A
Sbjct: 173 PNSKYAADAQKRMQHLKNRLALYSIKVAEYYIKMNAWSAAAIRAQSVLETYPGTPSTEKA 232

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260
           +  +  AY  L        V+ +++  YP  
Sbjct: 233 LEIMSTAYGELGQEKLKDHVLMVMKANYPNN 263


>gi|95929334|ref|ZP_01312077.1| lipoprotein, putative [Desulfuromonas acetoxidans DSM 684]
 gi|95134450|gb|EAT16106.1| lipoprotein, putative [Desulfuromonas acetoxidans DSM 684]
          Length = 252

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 89/195 (45%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           +K  + ++++++  A E++ +    F    +   + L      Y+   Y  A +  E+++
Sbjct: 39  QKGEIAMEKEHYLAAIEHWQKVRDSFTSPELTALAELKIGDAYYAQEDYISAVASYEDFL 98

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
            ++P       V Y +G S+   +     DQ AT+  L    ++++ Y +S   +    Y
Sbjct: 99  KKHPGHTQTASVMYRLGKSHFAQLLSADRDQTATRNALATFEQLLKNYPDSIDPQELNSY 158

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
           +    N+LAA E  IGR+YLK   Y AAI R + +   Y +  +    +  L  A     
Sbjct: 159 IEQCHNRLAANEAYIGRFYLKTKRYTAAISRLENITNTYPNYPNLTGVLFDLARAQKFDG 218

Query: 242 LMDEAREVVSLIQER 256
             D+A   +SL+Q+R
Sbjct: 219 KSDQALATLSLLQQR 233


>gi|302342571|ref|YP_003807100.1| outer membrane assembly lipoprotein YfiO [Desulfarculus baarsii DSM
           2075]
 gi|301639184|gb|ADK84506.1| outer membrane assembly lipoprotein YfiO [Desulfarculus baarsii DSM
           2075]
          Length = 280

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 89/189 (47%), Gaps = 2/189 (1%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           +E N+ +A E F Q    FP++  A  + L      +   +Y +A    E++I  +P+++
Sbjct: 62  QEGNYEEAAETFQQLKDRFPYSKFALLADLRLGDAYFKDERYDEAILAYEDFIRLHPKNE 121

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
            V Y  Y +GM Y + +     D    +  ++   +++  Y  + +   A         +
Sbjct: 122 GVPYAMYQIGMVYHEQMLTPDRDPTFARKAMEAFQKLMREYPKNEWSVKAVPRFQESAAR 181

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL--VEAYVALALMDEA 246
            AA ++ +G++Y   G+Y AAI RF+ V+  Y D    +EAM+ L   +A     L +EA
Sbjct: 182 AAAHDLAVGKFYYNTGKYPAAIYRFKRVMTQYPDVGLYDEAMSALQRAQADYDEQLAEEA 241

Query: 247 REVVSLIQE 255
            E   L +E
Sbjct: 242 EEYAGLSEE 250


>gi|323951204|gb|EGB47080.1| outer membrane assembly lipoprotein YfiO [Escherichia coli H252]
          Length = 249

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 87/201 (43%), Gaps = 10/201 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y  A   L++ N+ +A          +PF   +++  L   +  Y       A +  +
Sbjct: 34  EIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168
            +I   P   N+DYV Y+ G++   +          +     D +  +      S++V  
Sbjct: 94  RFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRG 153

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS Y   A   +   +++LA  E  +  YY +RG +VA + R + +L +Y D +   +
Sbjct: 154 YPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRD 213

Query: 229 AMARLVEAYVALALMDEAREV 249
           A+  +  AY  + +  +A +V
Sbjct: 214 ALPLMENAYRQMQMNAQAEKV 234


>gi|254508946|ref|ZP_05121053.1| DNA uptake lipoprotein [Vibrio parahaemolyticus 16]
 gi|219548121|gb|EED25139.1| DNA uptake lipoprotein [Vibrio parahaemolyticus 16]
          Length = 214

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 88/206 (42%), Gaps = 10/206 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y +A + L+  N+  A          +PF   + +  L   +  Y         +  E
Sbjct: 5   ELYSEAQVSLQSGNWLSAISQLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIE 64

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVER 168
            +    P  + +D+V Y+ G+++    R+  +D              K       R++ER
Sbjct: 65  RFTRLNPTHEKLDWVLYMRGLTHMAQDRNFMHDLFNVDRSDRDPEPVKKAFADFKRLLER 124

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y  S Y + ++  +   +N+LA  ++    +YL+R  ++AAI R Q +   Y D   A +
Sbjct: 125 YPTSLYAEDSQKRMLALKNRLAEYDLATADFYLRREAWIAAINRTQELQKTYPDTVAARK 184

Query: 229 AMARLVEAYVALALMDEAREVVSLIQ 254
           ++   +EAY  L L D  +    LI+
Sbjct: 185 SLKIQLEAYKQLGLEDAIKRTEELIK 210


>gi|222053859|ref|YP_002536221.1| outer membrane assembly lipoprotein YfiO [Geobacter sp. FRC-32]
 gi|221563148|gb|ACM19120.1| outer membrane assembly lipoprotein YfiO [Geobacter sp. FRC-32]
          Length = 244

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 20/161 (12%)

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y +AA+  +++   +P      Y YY + + Y   I  +  DQ   K  ++++   ++ Y
Sbjct: 80  YIEAAAAYDDFRKLHPNHDQAAYAYYRLALCYYNQITGIDTDQTPVKNAVKFLDSFIKLY 139

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE-- 227
             + YV  A+  +     +    EV +G +YL+ G+Y AAI R +  LA Y   E+++  
Sbjct: 140 PKAEYVPEAKAKLDECIGKQVEYEVYVGHFYLRSGKYQAAIKRLEETLAKYPKVENSDQV 199

Query: 228 ------------------EAMARLVEAYVALALMDEAREVV 250
                             EA  RL + YV+   ++EAR+V+
Sbjct: 200 LFYIGKAYFLSGDKAKGKEAFNRLAKQYVSSRYLEEARQVM 240


>gi|77919977|ref|YP_357792.1| TPR domain-containing protein [Pelobacter carbinolicus DSM 2380]
 gi|77546060|gb|ABA89622.1| TPR domain protein [Pelobacter carbinolicus DSM 2380]
          Length = 245

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 90/196 (45%), Gaps = 9/196 (4%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
           F S+A C L      +        V + +   E + +  L    +++  A + + +    
Sbjct: 7   FLSVA-CLLTACSTAT--------VPEAKTAEEYFNRGELAFANEDYQDAIKSYEKAMEI 57

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
           +  A + R++ L  A   ++   Y +AA+  E+++ ++P +     V + +G SY   I 
Sbjct: 58  YETAALNRRAELRIADAHFANKDYVEAAAGYEDFLKRHPGTPQSARVLFQLGESYFNQIL 117

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
            +  DQ AT+  L     +++ Y ++P  + A   V   +N LAA E+ +G +Y K  ++
Sbjct: 118 AIDRDQTATRNALVTFESLIKIYPDAPESRIAPERVRACKNHLAANELYVGLFYYKFEKH 177

Query: 207 VAAIPRFQLVLANYSD 222
            AAI R   +L  Y +
Sbjct: 178 KAAIGRLTEMLDKYPE 193


>gi|325121170|gb|ADY80693.1| putative competence protein (ComL) [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 387

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 108/250 (43%), Gaps = 22/250 (8%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L +   +A  F VG     S+   +D+      Q   +EKA   L    +  A +     
Sbjct: 11  LALSLGVASAF-VGCSSNPSKKEVVDTGPQSSEQ-AYFEKAQKSLDRGQYLDATKSLEAI 68

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM---- 139
              +P    A+++ L   + ++    Y+ A +L E +I   P+  NVDY YY+  +    
Sbjct: 69  DTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYVRAVANME 128

Query: 140 ----------SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY-VKGARFYVTVGRNQ 188
                     S  Q  RDV Y     K+  Q    ++ R+ +S Y V  A+    +G+ +
Sbjct: 129 QNYDSLMRYTSLQQSHRDVSY----LKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQ-E 183

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E+   R+ +KR  ++AA  R Q V+ +Y       EA+A L  +Y  L     +++
Sbjct: 184 LAENEMTAARFNVKRKAWIAAAERSQWVIEHYPQTPQIPEALATLAYSYDKLGDKATSQQ 243

Query: 249 VVSLIQERYP 258
            + +++  YP
Sbjct: 244 YIEVLKLNYP 253


>gi|294142198|ref|YP_003558176.1| hypothetical protein SVI_3427 [Shewanella violacea DSS12]
 gi|293328667|dbj|BAJ03398.1| conserved hypothetical protein [Shewanella violacea DSS12]
          Length = 253

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 103/257 (40%), Gaps = 23/257 (8%)

Query: 17  YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLD---SVTDVRYQREVYEKAVLFLKEQNF 73
           ++  K A+   FSIA+         SS D  L    +  DV     +Y +A   ++  N+
Sbjct: 2   HKFAKGAVLALFSIAITAC-----SSSPDEELKASKTSPDV-----LYSQARTSMELGNY 51

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
           SKA          +PF     +  L   +  Y         +  + +I   P  K++DYV
Sbjct: 52  SKAVRSLEALDSRYPFGPHKTQVQLDLIYAYYKLDDPASGIANIDRFIRLNPTHKDIDYV 111

Query: 134 YYLVGMSYAQ----MIRDV------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
           YY+ G+   Q    M  D+        D +      +   R+++ Y NS Y   A   + 
Sbjct: 112 YYMRGLVNMQSDSYMFHDMLNIDRTDRDPQVAINAFKDFDRLIKSYPNSKYANDAAERMQ 171

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
             +N+LA   + +  YY+K   + AA  R Q V+  Y      E A+  + +AY  L   
Sbjct: 172 YLKNRLAKYSINVAEYYMKMNAWSAAAIRAQSVMETYPGTSSTERALEIMADAYGELGQE 231

Query: 244 DEAREVVSLIQERYPQG 260
                V+++++  YP  
Sbjct: 232 KLKNNVLTVMKANYPDN 248


>gi|54310132|ref|YP_131152.1| hypothetical protein PBPRA3022 [Photobacterium profundum SS9]
 gi|46914571|emb|CAG21350.1| conserved hypothetical protein [Photobacterium profundum SS9]
          Length = 242

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 107/246 (43%), Gaps = 29/246 (11%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           LTI   +AV  L G    S+ +V    V DV    E+Y  A   L+  +++ A E     
Sbjct: 4   LTITTLLAVAILSGCS--STEEV----VPDVP-PAELYVTAQQALQSGSWTTAIERLETL 56

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY----PESKNVDYVYYLVGM 139
              +PF   + +  L   +  Y         +LGE  I ++    P  +  D+V Y+ G+
Sbjct: 57  DSRYPFGAYSEQVQLDLIYAYYKNDDL----ALGEATIARFNRLNPAHEKSDWVLYMRGL 112

Query: 140 SYAQMIRDVPY------------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           +  QM +D  +            D    +   +   R+++RY NS Y   A+  +   +N
Sbjct: 113 T--QMAQDRSFMHDIFSIDRHDRDPEPARKAFRDFKRLLDRYPNSQYAADAKARMIFIKN 170

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
           +LA  ++    +Y++R  ++AAI R Q +   Y D + A +++  ++ AY  L L +   
Sbjct: 171 RLADYDLATVDFYIRREAWIAAINRSQQIQKLYPDTQAARKSLPLMLTAYEKLGLQEPIE 230

Query: 248 EVVSLI 253
               LI
Sbjct: 231 NTKKLI 236


>gi|167625161|ref|YP_001675455.1| putative lipoprotein [Shewanella halifaxensis HAW-EB4]
 gi|167355183|gb|ABZ77796.1| putative lipoprotein [Shewanella halifaxensis HAW-EB4]
          Length = 268

 Score = 59.7 bits (143), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 89/211 (42%), Gaps = 10/211 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y +A   ++  N+SKA          FPF     +  L   +  Y         +  + 
Sbjct: 53  LYSQARTSMELGNYSKAVRSLEALDSRFPFGPHKTQVQLDLIYAYYKLDDPASGIANIDR 112

Query: 120 YITQYPESKNVDYVYYLVGMSYAQ----MIRDV------PYDQRATKLMLQYMSRIVERY 169
           +I   P  K++DYVYY+ G+   Q    +  D+        D +A +   +   R+++ Y
Sbjct: 113 FIRLNPTHKDIDYVYYMRGLVNMQSDRYLFHDMLNIDRSDRDPKAAQDAFKDFDRLIKSY 172

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
            NS Y   A+  +   +N+LA   +++  YY+K   + AA  R Q VL  Y     AE+A
Sbjct: 173 PNSKYAADAQKRMQHLKNRLALYSIKVAEYYIKMNAWSAAAVRAQSVLETYPGTPSAEKA 232

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260
           +  +  AY  L         + +++  +P  
Sbjct: 233 LEIMSTAYGELGQEKLKDHALMVMKANFPNN 263


>gi|163750157|ref|ZP_02157400.1| hypothetical protein KT99_20856 [Shewanella benthica KT99]
 gi|161330214|gb|EDQ01196.1| hypothetical protein KT99_20856 [Shewanella benthica KT99]
          Length = 269

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 107/267 (40%), Gaps = 17/267 (6%)

Query: 1   MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
           M  +L   +   +   ++  K A+   FSIA+         SS D  L +  + R    +
Sbjct: 1   MEKILTTTLKESKLSMHKFAKGAVLALFSIAITAC-----SSSPDEELKA--NKRSPDVL 53

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +A   ++  NFSKA          +PF     +  L   +  Y         +  + +
Sbjct: 54  YSQARTSMELGNFSKAVRSLEALDSRYPFGPHKTQVQLDLIYAYYKLDDPASGIANIDRF 113

Query: 121 ITQYPESKNVDYVYYLVGMSYAQ----MIRDV------PYDQRATKLMLQYMSRIVERYT 170
           I   P  K++DYVYY+ G+   Q    M  D+        D +  +   +   R+++ Y 
Sbjct: 114 IRLNPTHKDIDYVYYMRGLVNMQSDSYMFHDMLNIDRTDRDPKVAQDAFKDFDRLIKSYP 173

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
           NS Y   A   +   +N+LA   + +  YY+K   + AA  R Q V+  Y      E A+
Sbjct: 174 NSKYAYDAAQRMQFLKNRLAKYSINVAEYYMKMNAWSAAAIRAQSVMETYPGTPSTEHAL 233

Query: 231 ARLVEAYVALALMDEAREVVSLIQERY 257
             + +AY  L         +++++  Y
Sbjct: 234 EIMADAYGELGQEKLKENTLTVMKANY 260


>gi|319789104|ref|YP_004150737.1| outer membrane assembly lipoprotein YfiO [Thermovibrio ammonificans
           HB-1]
 gi|317113606|gb|ADU96096.1| outer membrane assembly lipoprotein YfiO [Thermovibrio ammonificans
           HB-1]
          Length = 316

 Score = 59.3 bits (142), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 80/175 (45%), Gaps = 8/175 (4%)

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
           N   ++  FA +A    L  A+  ++ G Y+ AA   EE++  YP S       + +G+ 
Sbjct: 54  NLPPKEQEFAKIA----LADAY--FNEGDYENAALNYEEFLQLYPASPRAKDALFRLGVC 107

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
           Y  +++   +D    K       R ++ Y N P VK A+ Y  + R  LA  E+ IG  Y
Sbjct: 108 YLNLVKGPQWDVTFAKRAYNIFQRFIKEYPNDPRVKKAKLYAELARKILAEHEIYIGGTY 167

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
               ++ A+I R+  V   + D E  +  +  L  AY    L  +A+E +  ++E
Sbjct: 168 DMLRKFTASIQRYTDVERKFKDVEAPDRLLYLLGRAYYYTPL--QAKEEIERLKE 220


>gi|149190360|ref|ZP_01868633.1| hypothetical protein VSAK1_14142 [Vibrio shilonii AK1]
 gi|148835849|gb|EDL52813.1| hypothetical protein VSAK1_14142 [Vibrio shilonii AK1]
          Length = 241

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/206 (21%), Positives = 88/206 (42%), Gaps = 10/206 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A   L+  N++ A E        +PF     +  L   +  Y         +  E
Sbjct: 32  QLYAEAQESLQGGNWTSAIERLEALDSRYPFGAYTEQVQLDLIYAYYKNDDLALGLATIE 91

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVER 168
            +    P  +  D+V Y+ G+++    R+  +D              K       R+++R
Sbjct: 92  RFSRLNPTHERSDWVLYMRGLTHMAQDRNFMHDILRIDRSDRDPEPVKAAFADFDRLLKR 151

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS Y + A+  +   +N+LA  ++    +Y++R  ++AAI R Q +   Y D E A +
Sbjct: 152 YPNSAYAEDAQKRMVALKNRLAKYDLATADFYIRREAWIAAINRAQEIQKTYPDTEAARQ 211

Query: 229 AMARLVEAYVALALMDEAREVVSLIQ 254
           ++    +AY  L + ++      L++
Sbjct: 212 SLVLQKKAYEELGMQEQVERTEKLME 237


>gi|90414901|ref|ZP_01222866.1| hypothetical protein P3TCK_25174 [Photobacterium profundum 3TCK]
 gi|90324015|gb|EAS40609.1| hypothetical protein P3TCK_25174 [Photobacterium profundum 3TCK]
          Length = 242

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 107/246 (43%), Gaps = 29/246 (11%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           LTI   +AV  L G    S+ +V    V D+    E+Y  A   L+  +++ A E     
Sbjct: 4   LTITTLLAVAILSGCS--STEEV----VPDIP-PAELYVTAQQALQSGSWTTAIERLETL 56

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY----PESKNVDYVYYLVGM 139
              +PF   + +  L   +  Y         +LGE  I ++    P  +  D+V Y+ G+
Sbjct: 57  DSRYPFGAYSEQVQLDLIYAYYKNDDL----ALGEATIARFNRLNPAHEKSDWVLYMRGL 112

Query: 140 SYAQMIRDVPY------------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           +  QM +D  +            D    +   +   R+++RY NS Y   A+  +   +N
Sbjct: 113 T--QMAQDRSFMHDIFSIDRHDRDPEPARKAFRDFKRLLDRYPNSQYAADAKARMIFIKN 170

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
           +LA  ++    +Y++R  ++AAI R Q +   Y D + A +++  ++ AY  L L +   
Sbjct: 171 RLADYDLATVDFYIRREAWIAAINRSQQIQRLYPDTQAARKSLPLMLTAYEKLGLQEPIE 230

Query: 248 EVVSLI 253
               LI
Sbjct: 231 NTKKLI 236


>gi|85058560|ref|YP_454262.1| outer membrane protein assembly complex subunit YfiO [Sodalis
           glossinidius str. 'morsitans']
 gi|84779080|dbj|BAE73857.1| putative lipoprotein [Sodalis glossinidius str. 'morsitans']
          Length = 243

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 55/246 (22%), Positives = 103/246 (41%), Gaps = 34/246 (13%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           A T+   +A C        S++D   D+        E+Y  A   L++ N+  A +    
Sbjct: 10  AATLCLVLAGC-------SSNKDAVPDNPPS-----EIYASAQQKLQDGNYKGAIKELEA 57

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
               +PF   A++  L   +  Y +     A +  + ++   P   NVDYV Y+ G++  
Sbjct: 58  LDNRYPFGPYAQQVQLDLIYAYYKSADLPLAQASIDRFLRLNPTHPNVDYVLYMRGLT-- 115

Query: 143 QMIRDVPYDQRA----------------TKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
               D+  D  A                 +   +  ++++  Y NS Y   A   +   +
Sbjct: 116 ----DMALDDSALQGFFGVDRSDRNPEHARAAFRDFTQLIRGYPNSQYAMDATKRLVYLK 171

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
           ++LA  E+ +  YY KRG YVA   R + +L ++ D +   +A+  + +AY  L L  +A
Sbjct: 172 DRLAKHELSVVEYYDKRGAYVAVANRVEQMLRDFPDTQATRQALPYMEKAYRELQLSGQA 231

Query: 247 REVVSL 252
            ++  +
Sbjct: 232 DKMSKI 237


>gi|258406026|ref|YP_003198768.1| outer membrane assembly lipoprotein YfiO [Desulfohalobium retbaense
           DSM 5692]
 gi|257798253|gb|ACV69190.1| outer membrane assembly lipoprotein YfiO [Desulfohalobium retbaense
           DSM 5692]
          Length = 244

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 36/165 (21%), Positives = 78/165 (47%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +E+ E     + E+++  A EYF +    +PF+     + L      +   +Y+ A    
Sbjct: 38  QELAEAGRAAMAEKDYDAAIEYFTKLKERYPFSPYTPDAELALGDAYFLDEQYKAAVDTY 97

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           +E+ + +P  K + +V + +G++  +    +   Q   +  LQY  R+ + +  +PY + 
Sbjct: 98  KEFESLHPRHKAIPHVLFQIGLANFKQFDSIDRPQTNMEEALQYFRRVQQGFPETPYAEK 157

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
           A  Y+T  R   A  E+ +  +Y +R ++ AA  R+  V   +++
Sbjct: 158 AGDYITQCRRYQAEHELFVADFYWRREDFGAAWKRYAYVAEEFAE 202


>gi|328951914|ref|YP_004369248.1| outer membrane assembly lipoprotein YfiO [Desulfobacca acetoxidans
           DSM 11109]
 gi|328452238|gb|AEB08067.1| outer membrane assembly lipoprotein YfiO [Desulfobacca acetoxidans
           DSM 11109]
          Length = 241

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 71/155 (45%)

Query: 68  LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
           L++  +  A + F +    +P++  A  + L  A  +Y   KY +A    +E+   +P +
Sbjct: 46  LRKGKYEDAVDAFEKLKDRYPYSDEALLASLKVADAKYYNKKYDEALLDYKEFEKLHPTN 105

Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           + + YV Y  GM Y +    +  D   T   +Q   R+ ERY     +  A  Y+    N
Sbjct: 106 QIIPYVIYQQGMCYYRQRSTIDRDPTYTVKAVQEYRRLKERYPQYEKISKAEDYMDKCLN 165

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
           +LA  E  +G +Y K   Y AA+ RF ++   Y D
Sbjct: 166 ELADHEYYVGEFYFKNKHYQAALERFAIIEQEYPD 200


>gi|303245508|ref|ZP_07331792.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio
           fructosovorans JJ]
 gi|302493357|gb|EFL53219.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio
           fructosovorans JJ]
          Length = 245

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 79/167 (47%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +E+YE     + E+++  A ++F +    +PF+       +  A   +    Y  AA   
Sbjct: 38  QELYEAGRQAMSEKDYYGAAKFFIKLKDRYPFSPYTPMGTIALADAYFLTEDYGPAAETY 97

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           +E+ + +P S+ + YV Y +G+S  +    +   Q   +  LQY   + + + ++ Y K 
Sbjct: 98  KEFESVHPRSEEIPYVLYQIGVSNFKRSESIDMPQGNLQEALQYFYLLQQTFPDTEYGKE 157

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           A  Y+   R +LA  E+ +  +Y +  +Y AA  R+   + N+ D E
Sbjct: 158 AAEYIRRCRKRLAEHELFVADFYWRTDQYGAAWKRYMYTVENFKDLE 204


>gi|1246513|emb|CAA94434.1| unkown [Escherichia coli K-12]
          Length = 203

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/196 (21%), Positives = 85/196 (43%), Gaps = 10/196 (5%)

Query: 68  LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
           +++ N+ +A          +PF   +++  L   +  Y       A +  + +I   P  
Sbjct: 1   MQDGNWRQAITQLEALYNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTH 60

Query: 128 KNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
            N+DYV Y+ G++   +          +     D +  +      S++V  Y NS Y   
Sbjct: 61  PNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTD 120

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           A   +   +++LA  E  +  YY +RG +VA + R + +L +Y D +   +A+  +  AY
Sbjct: 121 ATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAY 180

Query: 238 VALALMDEAREVVSLI 253
             + +  +A +V  +I
Sbjct: 181 RQMQMNAQAEKVAKII 196


>gi|311278475|ref|YP_003940706.1| outer membrane assembly lipoprotein YfiO [Enterobacter cloacae
           SCF1]
 gi|308747670|gb|ADO47422.1| outer membrane assembly lipoprotein YfiO [Enterobacter cloacae
           SCF1]
          Length = 245

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/205 (20%), Positives = 89/205 (43%), Gaps = 10/205 (4%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y  A   L++ N+ +A          +PF   +++  L   +  Y       A +  +
Sbjct: 34  EIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168
            ++   P   N+DYV Y+ G++   +          +     D +  +      +++V  
Sbjct: 94  RFMRLNPTHPNIDYVIYMRGLTNMALDDSALQGFFGVDRSDRDPQHARDAFNDFTKLVRG 153

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y  S Y   A   +   +++LA  E+ +  YY  RG +VA + R + +L +Y D +   +
Sbjct: 154 YPQSQYATDAYKRMVFLKDRLAKYELSVVDYYTDRGAWVAVVNRVEGMLRDYPDTQATRD 213

Query: 229 AMARLVEAYVALALMDEAREVVSLI 253
           A+ ++  AY  + +  +A +V  +I
Sbjct: 214 ALPKMENAYRQMQMNAQADKVAKII 238


>gi|330446993|ref|ZP_08310644.1| bamD [Photobacterium leiognathi subsp. mandapamensis svers.1.1.]
 gi|328491184|dbj|GAA05141.1| bamD [Photobacterium leiognathi subsp. mandapamensis svers.1.1.]
          Length = 242

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 98/241 (40%), Gaps = 17/241 (7%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           LTI   +AV  L G    SS++  +  V        +Y  A   L+  N++ A E     
Sbjct: 4   LTITTLLAVALLSGC---SSKEEVIPDVP----PSNLYATAQTALQSGNWTSAIEQLEAL 56

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +PF   + +  L   +  Y +       +  E ++   P+    D+V Y+ G+++  
Sbjct: 57  DSRYPFGAYSDQVQLDLIYAYYKSDDLALGEATIERFLRLNPDHPQADWVVYMRGLTHMA 116

Query: 144 MIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
             R   +D             ++        ++ERY  S Y   A+  +   +N+LA  +
Sbjct: 117 QDRSFMHDMFNINRFDRDPTPSRQAFTDFKYLLERYPESEYGADAKARMIFLKNRLANYD 176

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +    +Y++R  ++AAI R Q V   Y D E A E++     AY  L L  E      ++
Sbjct: 177 LATADFYVRREAWIAAINRCQQVQRLYPDTEAARESLKLEKTAYEKLNLQKEVERTEKMM 236

Query: 254 Q 254
           +
Sbjct: 237 K 237


>gi|88857988|ref|ZP_01132630.1| putative lipoprotein with tetratricopeptide repeats (TPR) domain
           [Pseudoalteromonas tunicata D2]
 gi|88819605|gb|EAR29418.1| putative lipoprotein with tetratricopeptide repeats (TPR) domain
           [Pseudoalteromonas tunicata D2]
          Length = 233

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/195 (21%), Positives = 90/195 (46%), Gaps = 10/195 (5%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y+ A   L    + +A E  +     +PF  ++++  +   +  Y +    ++ +  + 
Sbjct: 25  LYDDAKQTLDSGLYIRAIELLSAIDSRYPFGPMSKQVQMDLVYAHYQSNNTDKSIATIDR 84

Query: 120 YITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERY 169
           +I   P  K++DY+YY+ G++  +           +     D   T+   + +  ++++Y
Sbjct: 85  FIRLNPNHKDLDYMYYMRGLNNIKADENAFQEYFGVDRADRDPIKTREAYKDLDTLIKKY 144

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
             S Y   A+       N++A  EV++  YY  R  Y+AA  R + V+ ++  + + +EA
Sbjct: 145 PTSSYADEAKKRQVWLLNKMARYEVKVANYYYDRQAYLAAANRGKYVVEHFGQSSYVKEA 204

Query: 230 MARLVEAYVALALMD 244
           +  +V +Y  L L D
Sbjct: 205 LEIMVNSYDKLGLSD 219


>gi|182415413|ref|YP_001820479.1| TPR repeat-containing protein [Opitutus terrae PB90-1]
 gi|177842627|gb|ACB76879.1| Tetratricopeptide TPR_2 repeat protein [Opitutus terrae PB90-1]
          Length = 345

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 1/165 (0%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           N S+A +YF    +  P++  A  +L+  A     A + ++A    +  I QYP+S    
Sbjct: 160 NRSRAIDYFEIIVQTAPYSDYAPLALMNKARGHLRARETEEAIDALDRMINQYPQSLLAP 219

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
             Y  +  ++A ++    YDQ +TK  + Y    +  + N P V  A   +   +  LA 
Sbjct: 220 DAYLKLAQTHALLVEGPNYDQGSTKEAITYYEDFLILFPNDPNVPTAAKGLDEMKQVLAE 279

Query: 192 KEVEIGRYYL-KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
            ++ IG +Y  KR  Y AA   +   + +Y D+  A+ A  +L E
Sbjct: 280 SKIRIGDFYFYKRDNYTAARVFYNEAITSYPDSPVAQRARTKLAE 324


>gi|283850645|ref|ZP_06367932.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio sp.
           FW1012B]
 gi|283573888|gb|EFC21861.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio sp.
           FW1012B]
          Length = 245

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 77/168 (45%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +E+YE     + E+++  A  YF +    +PF+       +  A   +    Y  AA   
Sbjct: 38  QELYESGRQAMSEKDYYGAIGYFMKLKDRYPFSPYTPMGTVALADAYFLTEDYGPAAETY 97

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           +E+ + +P S+ + YV Y +G+S  +    +   Q   +  LQY   + + + ++ Y K 
Sbjct: 98  KEFESVHPRSEEIPYVLYQIGVSNFKRSESIDMPQGNLQEALQYFYLLEQTFPDTDYGKE 157

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           A  Y+   R +LA  E+ +  +Y +  ++ AA  R+     N+ D E 
Sbjct: 158 AAEYIRRCRKRLAEHELFVADFYWRTDQFGAAWKRYMYTAENFKDLEE 205


>gi|327399434|ref|YP_004340303.1| outer membrane assembly lipoprotein YfiO [Hippea maritima DSM
           10411]
 gi|327182063|gb|AEA34244.1| outer membrane assembly lipoprotein YfiO [Hippea maritima DSM
           10411]
          Length = 251

 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/193 (20%), Positives = 86/193 (44%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
            ++S+A       +   P +  A+++ +    V ++ G+Y  A     ++I  YP SK  
Sbjct: 47  HDYSEAEHALTMINAQHPGSIYAKRATIALGDVYFAKGEYILARDYYRKFIKLYPNSKEA 106

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
            Y  Y + +S+ +       D    +  ++    ++++Y N+PY     +Y+T    +L 
Sbjct: 107 VYAKYHIALSFYKARNGYKCDATPVREAIKEFLDLLDKYPNNPYKDKIYYYITKSVEELY 166

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
             E+ + ++Y    E+ AA  R   +  ++ +    +E +  L + Y  L    +A+E  
Sbjct: 167 KHELFVAKFYADLDEFNAAKNRLNYMYKHFKNVNFNDEMLFLLGKVYYHLGKKQQAKEFF 226

Query: 251 SLIQERYPQGYWA 263
             + ++YP   +A
Sbjct: 227 KELIKKYPNSDYA 239


>gi|293609057|ref|ZP_06691360.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292829630|gb|EFF87992.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 387

 Score = 56.6 bits (135), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 107/250 (42%), Gaps = 22/250 (8%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L +   +A  F VG     S+   +++      Q   +EKA   L    +  A +     
Sbjct: 11  LALSLGVASAF-VGCSSNPSKKEVVNTGPQSSEQ-AYFEKAQKSLDRGQYLDATKSLEAI 68

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM---- 139
              +P    A+++ L   + ++    Y+   +L E +I   P+  NVDY YY+  +    
Sbjct: 69  DTYYPTGQYAQQAQLELLYSKFKQKDYEGTIALAERFIRLNPQHPNVDYAYYVRAVANME 128

Query: 140 ----------SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY-VKGARFYVTVGRNQ 188
                     S  Q  RDV Y     K+  Q    ++ R+ +S Y V  A+    +G+ +
Sbjct: 129 QNYDSLMRYTSLQQSHRDVSY----LKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQ-E 183

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E+   R+ +KR  ++AA  R Q V+ +Y       EA+A L  +Y  L     +++
Sbjct: 184 LAENEMTAARFNVKRKAWIAAAERSQWVIEHYPQTPQIPEALATLAYSYDKLGDKATSQQ 243

Query: 249 VVSLIQERYP 258
            + +++  YP
Sbjct: 244 YIEVLKLNYP 253


>gi|239906803|ref|YP_002953544.1| hypothetical protein DMR_21670 [Desulfovibrio magneticus RS-1]
 gi|239796669|dbj|BAH75658.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 245

 Score = 56.6 bits (135), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 78/171 (45%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +E+YE     + ++++  A  YF +    +PF+       +      +    Y  AA   
Sbjct: 38  QELYEAGRQSMADKDYYGAINYFMKLKDRYPFSPYTPMGTVALGDAYFLTEDYGMAAETY 97

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           +E+ + +P S+ + YV Y VG+S  +    +   Q   +  +QY   + + + ++ Y K 
Sbjct: 98  KEFESVHPRSEEIPYVLYQVGVSNFKRSESIDMPQSNLQEAIQYFYLLEQTFPDTEYGKE 157

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           A  Y+   + ++A  E+ +  +Y +  +Y AA  R+   + NY D E   E
Sbjct: 158 AADYIRRCKKRMAEHELFVADFYWRTSQYGAAWKRYMYTVENYKDLEEVLE 208


>gi|116749145|ref|YP_845832.1| ComL family lipoprotein [Syntrophobacter fumaroxidans MPOB]
 gi|116698209|gb|ABK17397.1| lipoprotein, ComL family [Syntrophobacter fumaroxidans MPOB]
          Length = 258

 Score = 56.2 bits (134), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 73/156 (46%)

Query: 68  LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
           ++++++  A + F +    +P++  A  + L      +   KY +AA   EE+   +P +
Sbjct: 67  MQKKDYDDALKAFRKLKEHYPYSKYAILAELKIGDALFHDKKYSEAAIAYEEFARLHPRN 126

Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           + V YV Y +GMS+         D   T+  ++   R+V+ +  S Y + A+  +   + 
Sbjct: 127 EVVPYVLYQIGMSHFLTFTTTDRDPEETQAAIEAFQRVVQMFPQSDYARRAQKQLFECQK 186

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
           + AA E  +   Y + GEY A   R + +   YS A
Sbjct: 187 RAAAHEFNVASLYYRMGEYFATRARLRTINEKYSTA 222


>gi|308048516|ref|YP_003912082.1| outer membrane assembly lipoprotein YfiO [Ferrimonas balearica DSM
           9799]
 gi|307630706|gb|ADN75008.1| outer membrane assembly lipoprotein YfiO [Ferrimonas balearica DSM
           9799]
          Length = 256

 Score = 56.2 bits (134), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/249 (22%), Positives = 97/249 (38%), Gaps = 18/249 (7%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
            AL+  F+++ C   G      R  Y   V + R    +Y  A   ++  NF+KA +   
Sbjct: 10  LALSSVFALSACSSTG-----DRSGY---VVEDRTPEALYADARQAMELGNFTKASQVLE 61

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
                +PF     +  L   +  Y       A +  + +I   P   ++DYVYY+ G+  
Sbjct: 62  ALDSRYPFGPHKTQVQLDLIYAYYKLDDSASALANVDRFIRLNPTHPDIDYVYYMRGLVN 121

Query: 142 AQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
            Q           I     D        +    +V+ Y NS Y   A+  + + +N+LA 
Sbjct: 122 MQADSYLFHDMLGIDRTDRDPSNAVAAFRDFETLVKSYPNSRYAPDAQRRMIMLKNRLAE 181

Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
             +++  YY+    +V A  R Q VL  Y      E A+  ++ +Y  L         VS
Sbjct: 182 FSLKVAEYYVTMEAWVGAANRAQQVLETYPGTPATERALEIMITSYDELGQEAMRDHSVS 241

Query: 252 LIQERYPQG 260
           +++  +P  
Sbjct: 242 VLKATFPDN 250


>gi|308272037|emb|CBX28645.1| hypothetical protein N47_G39690 [uncultured Desulfobacterium sp.]
          Length = 218

 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/183 (21%), Positives = 83/183 (45%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +E  ++ ++  +++ + +A E F +    +PF+     + L  A   Y   +Y +A +  
Sbjct: 34  KEYADEGMVSFQDKEYKRAIESFQKIKDWYPFSNYLVLADLKIADSHYMLKQYNEAVAAY 93

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
            E+   +P ++ V YV +  G+ Y + +      Q   +  ++   R+ +++  + Y   
Sbjct: 94  NEFEKLHPANEAVPYVIFQTGLCYFEQVDTFDRQQATARKAIEIFMRLNKQFPKNIYETK 153

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
            R  + +    LA  E+ IG +Y K   Y AA+ RF+ VL  Y D     +A+  +    
Sbjct: 154 TRECINICYKTLAESELGIGLFYYKSKYYKAALYRFRNVLTKYPDTGVHHQAIIYIARCE 213

Query: 238 VAL 240
            A+
Sbjct: 214 TAI 216


>gi|218780247|ref|YP_002431565.1| outer membrane assembly lipoprotein YfiO [Desulfatibacillum
           alkenivorans AK-01]
 gi|218761631|gb|ACL04097.1| outer membrane assembly lipoprotein YfiO [Desulfatibacillum
           alkenivorans AK-01]
          Length = 266

 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 78/164 (47%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+    + + ++ ++++A E F +    +PF+  A  + L  A   +    Y+ A    E
Sbjct: 31  ELAADGIRYYEKGDYTQAIESFEKLKDWYPFSKYAILAELKLADSYFKRKNYEDAIYAYE 90

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            + + +P +  + YV + +GM Y +       DQ AT+  L+   R+   Y  S     A
Sbjct: 91  YFESLHPRNDAIPYVIFQIGMCYFEQKALPDRDQTATESALENFLRLTREYPASAEAAMA 150

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
             ++ + +  LA  ++ +G YY K  E+ AA  RF+ +LA Y D
Sbjct: 151 LEHIKICQETLARHDLFVGAYYFKAKEFHAARVRFRDILAAYPD 194


>gi|58699370|ref|ZP_00374137.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58534111|gb|EAL58343.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of
           Drosophila ananassae]
          Length = 150

 Score = 55.5 bits (132), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 68/136 (50%), Gaps = 11/136 (8%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +YK  +T F      FL+    QS    Y D +   + + E+YE+AV    ++ + +A  
Sbjct: 7   MYKTLITCFI-----FLICSFTQS----YADDLE--KTETELYEEAVELFDQKKYKQAIR 55

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            F++    +PF+  A K+ L+S    Y+ G Y  AAS  ++YI  Y   +++ YVYYL  
Sbjct: 56  AFHKIEDLYPFSYWAMKAKLLSGVSHYNMGNYSSAASDMDDYIYVYSNGEDLPYVYYLRV 115

Query: 139 MSYAQMIRDVPYDQRA 154
           +SY   I  V   Q+ 
Sbjct: 116 LSYYMQINKVQLGQQT 131


>gi|268316246|ref|YP_003289965.1| outer membrane assembly lipoprotein YfiO [Rhodothermus marinus DSM
           4252]
 gi|262333780|gb|ACY47577.1| outer membrane assembly lipoprotein YfiO [Rhodothermus marinus DSM
           4252]
          Length = 280

 Score = 55.1 bits (131), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 91/221 (41%), Gaps = 19/221 (8%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L I   +A C   G  R SS              +E +E+A+ F  +  + +A EYF   
Sbjct: 14  LVIGLLVAGCAGSGRLRHSS-------------PQEAFERAMEFYNQGKYDRAIEYFKAV 60

Query: 84  ---SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
               R   +A  A+  L   A   Y   +Y  AAS  E +I  Y     V    Y   M 
Sbjct: 61  FTYGRTHEWAADAQFYL---ARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMC 117

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
           Y ++      DQ  T+  ++     ++RY N   V  A   +   R +LA K+ E  R Y
Sbjct: 118 YYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLY 177

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
            +R  Y AA   ++ V   Y D   A++A+   + AY+A A
Sbjct: 178 ERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYA 218


>gi|119713311|gb|ABL97375.1| predicted secreted competence lipoprotein [uncultured marine
           bacterium EB80_02D08]
          Length = 272

 Score = 55.1 bits (131), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 48/207 (23%), Positives = 95/207 (45%), Gaps = 17/207 (8%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y++A   +  +N+  A E        +PF   + ++ +   +VQ+   + + A +  E++
Sbjct: 38  YDQAQRRIAAKNYFGAIESLEAIETRYPFGKYSEQAQVELIYVQFMNAETEAAHAAAEKF 97

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY------------MSRIVER 168
           I  +P   N+DY Y++ G+S     RD  +  R T   L              ++  + R
Sbjct: 98  IRLHPRHPNIDYAYFMKGLS--SYTRDNSFIVRMTDTDLSNRDISGAKESFSELTEFLTR 155

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           + +S Y   A+      RN +A  E+    YY+    ++AAI R   V+ N  ++     
Sbjct: 156 FPDSQYATYAKQRNIYLRNMIARNELAAADYYVSVDAHIAAIRRANYVIENIPNSSENYR 215

Query: 229 AMARLVEAYVALA---LMDEAREVVSL 252
           A+  L E+Y +L    L+++ R++++L
Sbjct: 216 ALKILEESYDSLGYVELLEDTRKIITL 242


>gi|118581055|ref|YP_902305.1| hypothetical protein Ppro_2643 [Pelobacter propionicus DSM 2379]
 gi|118503765|gb|ABL00248.1| Tetratricopeptide TPR_2 repeat protein [Pelobacter propionicus DSM
           2379]
          Length = 246

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/227 (22%), Positives = 96/227 (42%), Gaps = 8/227 (3%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
           A+C L     Q   ++ L+  TD     E+Y       ++  +  A   + +    FP  
Sbjct: 11  ALCTLTLL--QGCAELKLNKPTD-----ELYRDGEASFQKGKYEDAVIQWRRVKESFPPP 63

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
            ++ +  +  A   +    Y +AA+  E +   +P  + + Y  Y  G+S  + I+ +  
Sbjct: 64  ELSARVEINIADAYFLNKDYIEAAAEYENFRKLHPNHELMGYALYGQGLSNFKQIKGIDT 123

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
           DQ   K  L       + Y     +   +  +   R++    E+ +G++YL+ G Y AAI
Sbjct: 124 DQTPVKNALSLFESYTKLYPGGANLPDVQARIVDCRDKQLQYELYVGKFYLRTGSYPAAI 183

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV-VSLIQER 256
            RF+  L  + D   ++E +  L  AYV      + +EV   L++E 
Sbjct: 184 ARFEEALKGFGDLPRSDETLFYLGSAYVENGQKPKGQEVYTRLLKEH 230


>gi|85860041|ref|YP_462243.1| ComL family lipoprotein [Syntrophus aciditrophicus SB]
 gi|85723132|gb|ABC78075.1| lipoprotein, ComL family [Syntrophus aciditrophicus SB]
          Length = 239

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 76/150 (50%)

Query: 73  FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
           + KA E F +   ++P + +A  + +      YS   Y +A +   +++  +P ++N+ Y
Sbjct: 56  YKKAIESFERLRDEYPMSELAILAKVGIGDAHYSNKAYAEAEAAYNDFVYLHPTNENLPY 115

Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
           V Y +GM + + +  +  DQ  T    +   +++ R+ +S +   A   +   R ++A  
Sbjct: 116 VMYQIGMCHYKQMLSIDRDQTETVRAAKEFEKLLARFPDSKFSLMAEKMLRECRVRIAEH 175

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
           E  +G +Y K+ +Y AA+ RF+ +   Y++
Sbjct: 176 EFYVGEFYFKQKKYQAALKRFETINREYAN 205


>gi|330901398|gb|EGH32817.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
           japonica str. M301072PT]
          Length = 166

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 73/148 (49%), Gaps = 14/148 (9%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           SS++V  +++++V    E+Y++A   L   +++ A E        +PF   A ++ L   
Sbjct: 19  SSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLELI 74

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR--- 153
           +  Y  G+ + A S  E +I  +P+  NVDY YY+ G+ S+ Q    + R +P DQ    
Sbjct: 75  YSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKRD 134

Query: 154 --ATKLMLQYMSRIVERYTNSPYVKGAR 179
             A +      +++  R+ NS Y   A+
Sbjct: 135 PGAARDSFNEFAQLTSRFPNSRYAPDAK 162


>gi|148266018|ref|YP_001232724.1| DNA uptake lipoprotein-like protein [Geobacter uraniireducens Rf4]
 gi|146399518|gb|ABQ28151.1| DNA uptake lipoprotein-like protein [Geobacter uraniireducens Rf4]
          Length = 249

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 85/201 (42%), Gaps = 3/201 (1%)

Query: 67  FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
           F    N+  A   + +    F    ++    L  A   +    Y +AA+  E++   +P 
Sbjct: 42  FYASHNYEDAIAQWKKVKETFSSPELSTLVDLKIADAHFDNQSYIEAAAAYEDFRKLHPN 101

Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
            +   Y  Y +G+     I  +  DQ   K  +      +++Y  S YV   +  + V  
Sbjct: 102 HEKAAYALYRLGLCNYNQISGIDTDQTPVKNAVNLFEAFLKQYPKSEYVAEVKDKLDVCI 161

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
            +    E+ +GR+YL+  +Y AA  R +  L  Y  +E  +E +  L +AY       + 
Sbjct: 162 MKQIEYEIYVGRFYLRTEKYAAATKRLEEALLKYPKSEFHDETLFYLGKAYFLSGDKVKG 221

Query: 247 REVVSLIQERYPQGYWARYVE 267
           RE  +L+ ++Y     ++Y+E
Sbjct: 222 RETFNLLAKQYAS---SKYIE 239


>gi|251771637|gb|EES52212.1| DNA uptake lipoprotein-like protein [Leptospirillum
           ferrodiazotrophum]
          Length = 234

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 83/204 (40%), Gaps = 5/204 (2%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ-----YSAGKYQQAASLGEEYITQYPE 126
            F K   + N   +D P      K    SA +      Y  G + +A    + ++  +P 
Sbjct: 21  TFQKYNPFTNILPKDEPTHSFRTKVFGTSALLDEASRFYFKGDFIEARGEYKRFLELHPT 80

Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
                +  Y +GM     I  +  D   T+  L    ++++ Y +SPYV+ A+  V   R
Sbjct: 81  HPLAAFAQYRIGMCDFYQIGGIDRDPSPTEKALADFQKVIDEYPDSPYVEKAQKKVAFCR 140

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
            + A     +G +Y +   Y AA  RF  +L  Y D++    A     +A       ++A
Sbjct: 141 ERKARLHFYVGSFYYRTKFYKAAAYRFHSILLKYPDSKIYPRAQYNYAKALFHEKKREKA 200

Query: 247 REVVSLIQERYPQGYWARYVETLV 270
            EV+  I  + P   +AR  + L+
Sbjct: 201 AEVMRTIVAQSPGSTYARKAQILL 224


>gi|284105818|ref|ZP_06386222.1| DNA uptake lipoprotein-like protein [Candidatus Poribacteria sp.
           WGA-A3]
 gi|283830105|gb|EFC34371.1| DNA uptake lipoprotein-like protein [Candidatus Poribacteria sp.
           WGA-A3]
          Length = 329

 Score = 53.1 bits (126), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 1/126 (0%)

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
           Y  Y + +S+ +MI+ +  D    K   +    ++  +  S Y   AR  +   +  LA 
Sbjct: 96  YAQYRLALSHFKMIQTIDRDMTPVKKAQEEFWELIHGFPASQYEAEARVKIKECQGLLAK 155

Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE-VV 250
               +G++Y  R +Y+AA  RF+ ++  Y   E A E+   L + Y  L  +D AR+  V
Sbjct: 156 NHFFVGKFYYHREQYLAAAKRFEKIIIGYPSTEEAIESKLELAKTYQQLGALDWARDWAV 215

Query: 251 SLIQER 256
            L+Q+ 
Sbjct: 216 ELVQQH 221


>gi|325955604|ref|YP_004239264.1| outer membrane assembly lipoprotein YfiO [Weeksella virosa DSM
           16922]
 gi|323438222|gb|ADX68686.1| outer membrane assembly lipoprotein YfiO [Weeksella virosa DSM
           16922]
          Length = 296

 Score = 53.1 bits (126), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 7/220 (3%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           +F  +++ FLV     S    Y  ++     + E++  A    ++  +  A E +N+ S 
Sbjct: 1   MFKKVSLTFLVATMLTSCNTQYNKAMKSSD-KDEIFSIANTLFEQGKYDLALELYNRIST 59

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
            F     A       A   Y+   Y+ +  L + +   YP     +   YL   SY    
Sbjct: 60  SFVGTEKAADIAYNIAQANYNDENYRLSGHLFKNFAGTYPLDHRAEDALYLSAFSY---Y 116

Query: 146 RDVP---YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
           +D P    DQ +T   +  M   +  Y  S +V  A  Y+   R +L  K  EI R Y K
Sbjct: 117 KDSPRYNLDQTSTYNAIDEMQNFINTYPESEHVAQANEYIDELRGKLEKKAFEIARVYYK 176

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
             +Y AA   F  ++ ++ D+++ EEAM   + +   LA+
Sbjct: 177 TMKYKAAGVAFDNMVDDFPDSKYREEAMLYSLRSKAELAM 216


>gi|150025880|ref|YP_001296706.1| lipoprotein [Flavobacterium psychrophilum JIP02/86]
 gi|149772421|emb|CAL43903.1| Probable lipoprotein [Flavobacterium psychrophilum JIP02/86]
          Length = 264

 Score = 53.1 bits (126), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 4/152 (2%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y  G+Y  +    E +   YP+SKN +   +L   SY+++      DQ  T   +  +  
Sbjct: 77  YKTGQYYLSGYQFESFAALYPKSKNTEEAAFLGAKSYSELSPTYSLDQTDTDKAINKLQN 136

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
            + +Y NS Y+  A   V   R +L  K  EI + Y    ++  AI      +A+Y    
Sbjct: 137 FINKYPNSKYLADANVVVKDLREKLEKKAFEIAKQYNTISDFKPAIKALDNFIADYPGTP 196

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           + E+A+   + A   LA+      V S +Q R
Sbjct: 197 YKEKALFYKLNASYQLAI----NSVPSKMQAR 224


>gi|298504630|gb|ADI83353.1| outer membrane protein assembly lipoprotein YfiO, putative
           [Geobacter sulfurreducens KN400]
          Length = 254

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 62/149 (41%)

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           A  Q+ +G Y +AA+  EE+   +P  +   Y  Y  G+SY   I     DQ      + 
Sbjct: 81  ADAQFDSGNYIEAAASYEEFRKLHPNHEKSAYALYRQGLSYFNQIHGFDTDQTPVSNTVT 140

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
                +  Y  S Y +  R  +   R      E+ +G++Y +  +Y +AI R +  L  Y
Sbjct: 141 IFESFLRLYPQSEYAEEVRNKLDAARQNQVQYEIYVGQFYYRTEKYTSAIKRLEDALKRY 200

Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREV 249
             +   +E +  L +AY+        RE 
Sbjct: 201 PRSPLHDETLYYLGKAYIKAGDKAGGREA 229


>gi|261416538|ref|YP_003250221.1| outer membrane assembly lipoprotein YfiO [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|261372994|gb|ACX75739.1| outer membrane assembly lipoprotein YfiO [Fibrobacter succinogenes
           subsp. succinogenes S85]
          Length = 293

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/237 (20%), Positives = 102/237 (43%), Gaps = 5/237 (2%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
            L+K  L + F + +  ++G    S++       T   + +  YE A    K + + +A 
Sbjct: 13  NLFKCTLFVPFFLYMATVMGCSTASTK-----KTTHTEWCKARYEAAEELFKAKKYGRAT 67

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           E   +       +G   ++  + A   ++  ++ +A      +I  +P S   +   +  
Sbjct: 68  ERLEEILSTCAGSGYMEQAQFLLAESHFNLEQWIEARGEYGSFIVNFPGSPFAETAEFRK 127

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
            +S   M   +  D+  T   ++   R +  + N+P      +Y  +  +++A KE + G
Sbjct: 128 AVSSFNMDYRIDRDESNTTTAMKDFERYLANHPNTPLRDSVNYYYNLLVDRVAEKEFQTG 187

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
           R YL+  +  AA+  F+  L  Y  A+  +EA+  + +AY  L   + AR+ ++  Q
Sbjct: 188 RLYLRMEKPQAAVIYFKEFLETYPKAQRRQEALFLISDAYTDLDQFESARQYLATAQ 244


>gi|329666231|pdb|3QKY|A Chain A, Crystal Structure Of Rhodothermus Marinus Bamd
          Length = 261

 Score = 52.4 bits (124), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 81/186 (43%), Gaps = 6/186 (3%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           E +E+A+ F  +  + +A EYF       R   +A  A+  L   A   Y   +Y  AAS
Sbjct: 17  EAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYL---ARAYYQNKEYLLAAS 73

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
             E +I  Y     V    Y   M Y ++      DQ  T+  ++     ++RY N   V
Sbjct: 74  EYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELV 133

Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
             A   +   R +LA K+ E  R Y +R  Y AA   ++ V   Y D   A++A+   + 
Sbjct: 134 DDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMR 193

Query: 236 AYVALA 241
           AY+A A
Sbjct: 194 AYIAYA 199


>gi|71891967|ref|YP_277697.1| putative lipoprotein [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
 gi|71796073|gb|AAZ40824.1| putative lipoprotein [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
          Length = 247

 Score = 52.0 bits (123), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 77/168 (45%), Gaps = 26/168 (15%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS- 163
           Y     + A +  E +   YP  K+ DYV Y+ G+    +  D        K +++Y++ 
Sbjct: 81  YKLNDLKSANNYIEHFFKLYPNHKHFDYVLYMHGVINMCLDED-------NKKLIKYLNI 133

Query: 164 ------------------RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
                             R++ +Y +S Y   A   +   +N++A  E+ I ++Y K+  
Sbjct: 134 NWFDRNPMYACIAFHTFVRLIRQYPDSQYSLDAYKRLIFLKNRVAEYELSIVKFYSKKHA 193

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           Y++ I R + +L ++ D +   +A+  + +AY  + L D+A +V  +I
Sbjct: 194 YISVIARVEKMLYHFPDTQATRKALYYMQQAYQNIYLPDQANKVAKII 241


>gi|297184481|gb|ADI20595.1| DNA uptake lipoprotein [uncultured gamma proteobacterium
           EBAC_27G05]
          Length = 272

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/204 (22%), Positives = 87/204 (42%), Gaps = 13/204 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A   ++  NF  A E        +PF   A ++     +  +  G+ + +    E++
Sbjct: 41  YDLAQRRMQANNFFSAIEALQAIESRYPFGRYAEQAQSELIYAYFMNGEDEASHEAAEKF 100

Query: 121 ITQYPESKNVDYVYYLVGMS--------YAQMIRD--VPYDQRATKLMLQYMSRIVERYT 170
           I   P   N+DY Y++ G++        +A++ +      D    K     +S  + R+ 
Sbjct: 101 IRLNPRHPNIDYAYFMKGIASYTRDKGMFARVFKSDLSNRDISGAKQAFSELSEFLTRFP 160

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            S Y   A   +   R+ +A  E+    YY+KR  YVAA+ R   V+ N  +      A+
Sbjct: 161 QSQYAPYASQRLIYLRSLIAKSELVAADYYMKRKAYVAALRRANYVIENIPNTSETIRAL 220

Query: 231 ARLVEAYVALA---LMDEAREVVS 251
             + + Y  L    LMD+ ++++ 
Sbjct: 221 KVVRDCYRELGYFKLMDDIQKIID 244


>gi|39995608|ref|NP_951559.1| putative lipoprotein [Geobacter sulfurreducens PCA]
 gi|39982371|gb|AAR33832.1| lipoprotein, putative [Geobacter sulfurreducens PCA]
          Length = 254

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 62/149 (41%)

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           A  Q+ +G Y +AA+  EE+   +P  +   Y  Y  G+SY   I     DQ      + 
Sbjct: 81  ADAQFDSGNYIEAAASYEEFRKLHPNHEKSAYALYRQGLSYFNQIHGFDTDQTPVSNTVT 140

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
                +  Y  S + +  R  +   R      E+ +G++Y +  +Y +AI R +  L  Y
Sbjct: 141 IFESFLRLYPQSEHAEEVRNKLDAARQNQVQYEIYVGQFYYRTEKYTSAIKRLEDALKRY 200

Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREV 249
             +   +E +  L +AY+        RE 
Sbjct: 201 PRSPLHDETLYYLGKAYIKAGDKAGGREA 229


>gi|320355040|ref|YP_004196379.1| outer membrane assembly lipoprotein YfiO [Desulfobulbus propionicus
           DSM 2032]
 gi|320123542|gb|ADW19088.1| outer membrane assembly lipoprotein YfiO [Desulfobulbus propionicus
           DSM 2032]
          Length = 291

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 76/162 (46%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           ++ +A + F     + PF+  A  + L +A   Y   +Y +A +L + +  ++P ++ + 
Sbjct: 69  DYGEAIKNFKIILDEHPFSAQAMLAELKAADANYYNKQYAEAKTLYKSFEERHPTNEAIP 128

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
           YV + VGM   +    +  D    +  ++  +R++  Y  SPY K A+  +   +  L  
Sbjct: 129 YVMFQVGMCDYRRSDRIDRDASGPQEAIKSFTRLINAYPQSPYAKEAKAKIIECKEFLVN 188

Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
            E  +  +Y++      A  R + +LA Y D+  A +A A L
Sbjct: 189 HEYMVAVFYVRTDRQEEAKHRLKYLLAMYPDSNLAPQAKALL 230


>gi|325281824|ref|YP_004254366.1| outer membrane assembly lipoprotein YfiO [Odoribacter splanchnicus
           DSM 20712]
 gi|324313633|gb|ADY34186.1| outer membrane assembly lipoprotein YfiO [Odoribacter splanchnicus
           DSM 20712]
          Length = 266

 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/220 (23%), Positives = 92/220 (41%), Gaps = 10/220 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           VY+KA+ +  + ++ +A    +     F     A+      AF  Y+   YQ A+ L ++
Sbjct: 32  VYKKAIEYYNKGDYQRAMNLLDGVRSVFVGQAKAQNIAYYRAFCSYNMKDYQIASDLFKQ 91

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           +I  YPES   +   Y++G    +       DQ+ T+  ++     + RY  S       
Sbjct: 92  FIQTYPESSFAEECLYMMGFCDYKASPKPRLDQQVTEKAIREFQLYLSRYPYSMRKDKVN 151

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
            Y+   R++L+ K     + Y  R  Y AA+   Q  L +Y  +++ EE M  L  +   
Sbjct: 152 TYMDEMRDKLSYKAYLSAKNYYLREHYKAAVISLQNCLKDYPGSKYREEIMYMLFVSKYQ 211

Query: 240 LALM----------DEAREVVSLIQERYPQGYWARYVETL 269
           +A+           + ARE      + YP   +A  V+ +
Sbjct: 212 MAVNSVEDKKVERYNNAREEYYYFADEYPNSRYAADVKKM 251


>gi|91202470|emb|CAJ72109.1| hypothetical protein kustd1364 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 308

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 85/195 (43%), Gaps = 9/195 (4%)

Query: 45  DVYLDSVTDVRYQREVYEKAV---LFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           D  L      +  +EV+EK     +   E + + A   F +   + P   +A +S +  A
Sbjct: 107 DTVLREYPGTKRTKEVHEKVFQVGIAQMEMDENAAIRVFEKIIENHPMGPIAPESQIKIA 166

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
              +  G Y+ A    ++++  YP ++ + YV Y + +S     +     +R   L++  
Sbjct: 167 DCYFKLGYYEDAVDAYKKFMESYPRNEWIPYVQYQIPLSKFYFEKQ---QERNYGLLVSA 223

Query: 162 MSRIVERYTNSP---YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
                E    +P   YV+ A   +   R   A +E EIG +YL+R    +A   F+ V+ 
Sbjct: 224 REGFEEYLVTNPHGVYVEDASRMIEEIRVIEARREFEIGEFYLRRKTPSSASIYFKYVIK 283

Query: 219 NYSDAEHAEEAMARL 233
           ++ D   AE AM RL
Sbjct: 284 DFPDTIWAERAMERL 298


>gi|289806131|ref|ZP_06536760.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 138

 Score = 49.3 bits (116), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 47/91 (51%)

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
           S++V  Y NS Y   A   +   +++LA  E  +  YY  RG +VA + R + +L NY D
Sbjct: 41  SKLVRSYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPD 100

Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +   +A+  +  AY  + L  +A +V  +I
Sbjct: 101 TQATRDALPLMENAYRQMQLNAQADKVAKII 131


>gi|213423524|ref|ZP_03356504.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
          Length = 112

 Score = 49.3 bits (116), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 47/91 (51%)

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
           S++V  Y NS Y   A   +   +++LA  E  +  YY  RG +VA + R + +L NY D
Sbjct: 15  SKLVRSYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPD 74

Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +   +A+  +  AY  + L  +A +V  +I
Sbjct: 75  TQATRDALPLMENAYRQMQLNAQADKVAKII 105


>gi|302036223|ref|YP_003796545.1| hypothetical protein NIDE0853 [Candidatus Nitrospira defluvii]
 gi|300604287|emb|CBK40619.1| protein of unknown function, TPR-like [Candidatus Nitrospira
           defluvii]
          Length = 306

 Score = 48.9 bits (115), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 59/128 (46%)

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
           Y    +  S+ +M + +  D    +  +    ++ + +  S Y   A   +    + LA 
Sbjct: 95  YAQLRLAESHLRMAKSIDRDPEPIQKAIASFEKLRKEFPGSKYEAQALQRIADCHDWLAQ 154

Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
             + +G++Y +R  Y+AA  RF  ++ +Y D + A EA+  L   Y  L   D A E + 
Sbjct: 155 THLFVGQFYYRRASYLAAAHRFDQIMKDYPDKKVAPEALYYLALTYQELGADDWAMEKLQ 214

Query: 252 LIQERYPQ 259
           L+ E+YP 
Sbjct: 215 LLAEKYPN 222


>gi|9971938|gb|AAG10500.1|AF279106_62 predicted secreted lipoprotein [uncultured marine gamma
           proteobacterium EBAC31A08]
          Length = 272

 Score = 48.9 bits (115), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 45/207 (21%), Positives = 93/207 (44%), Gaps = 17/207 (8%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y++A   +  +N+  A +        +PF   A ++ +   + Q+   + + A +  E++
Sbjct: 38  YDQAQRRMAGKNYFGAIDSLEAIESRYPFGKYAEQAQVELIYAQFMNAETEAAHAAAEKF 97

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY------------MSRIVER 168
           I  +P   N+DY Y++ G+S     RD  +  R T   L              ++  + R
Sbjct: 98  IRLHPRHPNIDYAYFMKGLS--SYTRDNSFIVRMTDTDLSNRDISGAKESFSELTEFLTR 155

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           + +S Y   A+      RN +A  E+    YY+    ++AAI R   V+ N  ++     
Sbjct: 156 FPDSQYSTYAKQRNIYLRNMIARNELAAADYYVSVDAHIAAIRRANYVIENIPNSSENYR 215

Query: 229 AMARLVEAYVALA---LMDEAREVVSL 252
           A+  L  +Y +L    L+++ ++++S+
Sbjct: 216 ALKILEASYESLGYIELLEDTKKIISI 242


>gi|213622690|ref|ZP_03375473.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-2068]
          Length = 116

 Score = 48.9 bits (115), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 47/91 (51%)

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
           S++V  Y NS Y   A   +   +++LA  E  +  YY  RG +VA + R + +L NY D
Sbjct: 19  SKLVRSYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPD 78

Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +   +A+  +  AY  + L  +A +V  +I
Sbjct: 79  TQATRDALPLMENAYRQMQLNAQADKVAKII 109


>gi|228472533|ref|ZP_04057293.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga gingivalis
           ATCC 33624]
 gi|228275946|gb|EEK14702.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga gingivalis
           ATCC 33624]
          Length = 264

 Score = 48.9 bits (115), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 61/143 (42%), Gaps = 1/143 (0%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +L M A   Y   KY  A    E ++  YP S+  + V +L G            DQ AT
Sbjct: 70  ALYMYADSFYKRKKYLLAGYQYERFLKNYPRSEKAEEVLFLQGKCNFLESPKYSLDQDAT 129

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
              L  +   ++RY N  Y++ A   V    N+L  K  EI + Y K  +Y AAI  F  
Sbjct: 130 YKALDQLQEYIDRYPNGAYLREANNMVLELLNKLQHKSFEIAKGYDKIRDYQAAIKSFDN 189

Query: 216 VLANYSDAEHAEEAM-ARLVEAY 237
            L     +   EEAM  RL  AY
Sbjct: 190 FLVENPGSTFREEAMYYRLHSAY 212


>gi|206603307|gb|EDZ39787.1| Probable DNA uptake lipoprotein [Leptospirillum sp. Group II '5-way
           CG']
          Length = 243

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/175 (21%), Positives = 76/175 (43%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +LL  A   Y  G + +A    + ++  +P      +  Y +GM     I  V  D    
Sbjct: 55  ALLDEASRFYFKGDFIEARGEYKRFLELHPTHPLAAFAQYRMGMCDYYQILSVDRDPTPV 114

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           +  L    ++++ + +S YV  A+  + V R++L+     +G +Y K   + AA  RF  
Sbjct: 115 RKALADFQKVIDEFPDSSYVGKAQKKIAVCRDRLSRVHFYVGYFYYKTKRFKAASYRFHT 174

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
           +L  Y D+   + A      +   L    +A  ++  + +++P+  +AR    L+
Sbjct: 175 ILLKYPDSRKYDRAEFYFALSKFHLKQRHQAVRLLKRLIQQFPKSKYARKSSILL 229


>gi|124516467|gb|EAY57975.1| probable DNA uptake lipoprotein [Leptospirillum rubarum]
          Length = 243

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/175 (21%), Positives = 76/175 (43%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +LL  A   Y  G + +A    + ++  +P      +  Y +GM     I  V  D    
Sbjct: 55  ALLDEASRFYFKGDFIEARGEYKRFLELHPTHPLAAFAQYRMGMCDYYQILSVDRDPTPV 114

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           +  L    ++++ + +S YV  A+  + + R++L+     +G +Y K   + AA  RF  
Sbjct: 115 RKALSDFQKVIDEFPDSNYVGKAQKKIAICRDRLSRVHFYVGYFYYKTKRFKAASYRFHT 174

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
           +L  Y D+   + A      +   L    +A  ++  + +++P+  +AR    L+
Sbjct: 175 ILLKYPDSRKYDRAEFYFALSKFHLKQRHQAVHLLKRLIQQFPKSKYARKSSILL 229


>gi|218960399|ref|YP_001740174.1| hypothetical protein; putative signal peptide [Candidatus
           Cloacamonas acidaminovorans]
 gi|167729056|emb|CAO79967.1| hypothetical protein; putative signal peptide [Candidatus
           Cloacamonas acidaminovorans]
          Length = 244

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/160 (20%), Positives = 74/160 (46%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           ++  K+  A +  +++I  +P+ +NV   Y+ +G+   +      YDQ  T   ++    
Sbjct: 74  FNMNKFSDARAKYQQFINSFPDHENVADAYFRIGVCLFEESLPPQYDQTETIKCIEAFQT 133

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
            ++RY N P    A  Y+   + +L  K+   G  Y K  +Y +A+  F  +++  ++ E
Sbjct: 134 FIDRYPNDPRYVQAVDYIHKCQYKLLEKQYLTGYIYYKMKDYSSALMYFDEIVSLGNNDE 193

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
              +++    + ++     D+A+     ++ RYP    A+
Sbjct: 194 LDRQSLYYSAKLHLHQKNYDKAKASYERLKNRYPDSKEAK 233


>gi|78224207|ref|YP_385954.1| putative lipoprotein [Geobacter metallireducens GS-15]
 gi|78195462|gb|ABB33229.1| lipoprotein, putative [Geobacter metallireducens GS-15]
          Length = 249

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 61/141 (43%)

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
           L  A  Q++   Y +AA+  EE+   +P  +   Y  Y   +S  + I  +  DQ     
Sbjct: 73  LKIADAQFADKSYIEAAASYEEFRKLHPNHEKAPYALYRQALSQYEQITGIDTDQTPVSN 132

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
            +      +  Y +S Y    R  + V R +    E+ +GR+Y +  +Y AAI R +  L
Sbjct: 133 AVTLFESFLRIYPSSEYAAEVRDKLEVCRLKQVEHEIYVGRFYYRTDQYGAAIKRLEDAL 192

Query: 218 ANYSDAEHAEEAMARLVEAYV 238
             Y  +   +E +  L  AY+
Sbjct: 193 KKYPRSPAHDETLFYLGSAYI 213


>gi|94676731|ref|YP_588649.1| hypothetical protein BCI_0192 [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|94219881|gb|ABF14040.1| conserved hypothetical protein [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 231

 Score = 46.6 bits (109), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 48/215 (22%), Positives = 90/215 (41%), Gaps = 25/215 (11%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           S+++V+LD +       E Y  A   L++  + +A +        + F    ++  L   
Sbjct: 21  SNQNVFLDHLP-----AETYASARQKLQQGYYKQAIKQLEALDNYYMFGPNTQQLQLDLI 75

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM----------------SYAQMI 145
           +  Y     Q+A +L + ++       N DYV Y+ G+                 +    
Sbjct: 76  YAYYKLSNMQKAQNLIDRFLRTNANHSNTDYVLYICGLIEMKLDEQALSKYFLFGFNHFE 135

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
           RD P   RA  +  Q   +++  Y +S Y   A+  +   +N+LA  E+ +  +Y K G 
Sbjct: 136 RD-PKHARAAVISFQ---QLINNYPHSIYAIDAKKILIYLQNRLANYELTVIEFYSKVGA 191

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
           YVA + R + +L+N+ +     +A   +  AY  L
Sbjct: 192 YVAVVTRVKHMLSNFPNNNATYQARKHMERAYQQL 226


>gi|326799177|ref|YP_004316996.1| outer membrane assembly lipoprotein YfiO [Sphingobacterium sp. 21]
 gi|326549941|gb|ADZ78326.1| outer membrane assembly lipoprotein YfiO [Sphingobacterium sp. 21]
          Length = 298

 Score = 46.2 bits (108), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 92/230 (40%), Gaps = 28/230 (12%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM--SAFVQYSAGKYQQAASLGE 118
           Y +A+     + +SKA   F   S  +   G      LM   A+  Y    Y  A    +
Sbjct: 33  YREAINLYNNKKYSKALILFEDLSNKY--RGRPENEELMYYFAYTNYRLRDYTSARFHFK 90

Query: 119 EYITQYPESKNVD-------YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            +  QYP+S+  +       Y YYL    Y         DQ  T   ++ +   +  Y  
Sbjct: 91  NFTDQYPQSQRAEECRFMGAYCYYLESPVYT-------LDQENTLKAIESLQLFINLYPK 143

Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
           S   + A  ++   R++L  K     + YL  G+Y AA+  FQ  L +Y D ++AEE   
Sbjct: 144 SDRAEEAAKFIQDLRDKLEHKSYANAKLYLDVGDYKAAVIAFQNSLRDYPDTKYAEEMEY 203

Query: 232 RLVEA---YVALALM-------DEAREVVSLIQERYPQGYWARYVETLVK 271
             +EA   Y   + +        EA E  +   + YP+  + +  E+L K
Sbjct: 204 LAIEAQYLYAKNSQLPSQEARYQEAVEFSNRFIDNYPESKYKKDAESLKK 253


>gi|262197816|ref|YP_003269025.1| outer membrane assembly lipoprotein YfiO [Haliangium ochraceum DSM
           14365]
 gi|262081163|gb|ACY17132.1| outer membrane assembly lipoprotein YfiO [Haliangium ochraceum DSM
           14365]
          Length = 261

 Score = 46.2 bits (108), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 49/212 (23%), Positives = 102/212 (48%), Gaps = 10/212 (4%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           ++ Y K +L L+E+++  A +YF    + FP++  A  + L  A  ++ A  Y QA    
Sbjct: 34  QQNYSKGMLELEEKDWIAAVKYFAFVKQRFPYSKYAVLAELRMADAEFGAEHYLQAVDAF 93

Query: 118 EEYITQYPESKNV--DYVYYLVGMSYAQMIRDVPY--------DQRATKLMLQYMSRIVE 167
           + +I  +P  + V   Y  + VG +Y +++ D  +        D  +T    + ++  ++
Sbjct: 94  KLFIKFHPTHEQVVDGYAAFRVGAAYYELLPDDMWILPPSYEKDPSSTYDAERELATFLK 153

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
           +Y +S Y + A+  +      LAA E  + ++Y  R + +  + R + +L  Y+      
Sbjct: 154 KYPDSAYHEEAKEMLAAVHAHLAAHEWYVAKFYWDREKPMGTVLRLRRLLDRYAGTRFDG 213

Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           +A+  L  AY+ + + + ARE    + E++P 
Sbjct: 214 DALWLLGSAYMKVDMPERAREAWQTLIEQHPD 245


>gi|256425917|ref|YP_003126570.1| outer membrane assembly lipoprotein YfiO [Chitinophaga pinensis DSM
           2588]
 gi|256040825|gb|ACU64369.1| outer membrane assembly lipoprotein YfiO [Chitinophaga pinensis DSM
           2588]
          Length = 302

 Score = 46.2 bits (108), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 55/137 (40%)

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
            +  Y    Y QA    + Y+  +P S     + Y+    Y +    V  DQ  T+  + 
Sbjct: 77  CYCSYKMKDYVQAGFYFKNYLDNFPNSPRATEMDYMQAYCYYKQSPKVALDQTNTQKAIA 136

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
            M   +  Y  S  V  A   + + R +L  KE      Y   G Y AA   F+ ++ N+
Sbjct: 137 AMQTFINNYPTSDKVPEANLVIELSRRKLEKKEYNNAELYYNLGHYQAAAITFKSLMRNF 196

Query: 221 SDAEHAEEAMARLVEAY 237
            D++ ++      ++AY
Sbjct: 197 PDSDKSDSYKYMAIKAY 213


>gi|189502538|ref|YP_001958255.1| hypothetical protein Aasi_1196 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189497979|gb|ACE06526.1| hypothetical protein Aasi_1196 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 267

 Score = 45.8 bits (107), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 4/160 (2%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLG----EEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
            RK ++ + F Q  A  YQ++  +     E +   YP     +   Y+ G S    I D+
Sbjct: 60  GRKEIIPAQFYQAYAYFYQKSYKMSAYCFESFYKTYPRLAQAEEALYMQGYSLYLSIPDI 119

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
             DQ  T+  L+ +   + +Y +  Y + A  Y    +N+L  K  +  + Y + G Y A
Sbjct: 120 RLDQAVTEKALKTLQTYLNKYPSGTYQQEAHQYNDELQNKLMLKSFKAAKLYYELGHYKA 179

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           A+         Y ++ + EEA+   ++A    AL  E +E
Sbjct: 180 AVIALGNFREKYPESIYQEEALCLQIQAQYKWALGSEVKE 219


>gi|114321550|ref|YP_743233.1| DNA uptake lipoprotein-like protein [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114227944|gb|ABI57743.1| DNA uptake lipoprotein-like protein [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 245

 Score = 45.8 bits (107), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 88/212 (41%), Gaps = 18/212 (8%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYF------NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           E Y   V  L E + + A E F      +  SR    AG AR  L   A++ Y AG+   
Sbjct: 35  EQYRAGVAALDEDDRAAARERFEALIERHATSR---HAGQARAEL---AWLHYRAGELDA 88

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQ-----MIRDVPYDQRATKLMLQYMSRIVE 167
           A          +P+  ++ Y  Y+  M+  Q     + R  P DQR  +        +V+
Sbjct: 89  AREQASRMAETHPDHPSLPYALYVAAMAAEQQWEDSLARGEP-DQRLARRAFADYRAVVD 147

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
                 +   A   ++  R  +A  E+++ R  L+ G    A+ R + V  +Y  +E   
Sbjct: 148 LDAEDRHAGLALEAMSALREAIARHELDLARTRLEDGAADEALDRARYVGEHYPRSETLG 207

Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           +AMA  + A  +L   D+A EV  +++   P 
Sbjct: 208 DAMALQINALESLGEQDKAGEVRRMLRLHQPD 239


>gi|163757156|ref|ZP_02164258.1| hypothetical protein KAOT1_00785 [Kordia algicida OT-1]
 gi|161322884|gb|EDP94231.1| hypothetical protein KAOT1_00785 [Kordia algicida OT-1]
          Length = 1012

 Score = 45.4 bits (106), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 45/220 (20%), Positives = 100/220 (45%), Gaps = 22/220 (10%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +YE    ++ E+   K  + + +   ++P +    K++L    + Y++GK Q A +    
Sbjct: 614 LYELGNTYINEEKTVKGLDTYAKMVSEYPKSSYVPKTILKQGLINYNSGKNQVALTKFRS 673

Query: 120 YITQYPESK-------NVDYVYYLVGM--SYAQMIRDVPYDQRATKLMLQYMS------R 164
            ++++P ++           +Y  +G    YA  ++D+ +    T + L   +      +
Sbjct: 674 VVSKFPNTEEAIQAVATAKLIYIELGQVEVYANWVKDLDF-VDVTNVELDKATYESAEKQ 732

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVE--IGRYYLKRGEYVAAIPRFQLVLANYSD 222
            ++  T+   ++G   Y+    N L A +    + + Y  +GE    IP ++ VL N   
Sbjct: 733 FIQNNTDKA-IEGFEKYINQFPNGLNAVKANFYLAQSYFSKGETQKTIPHYEYVLQN-EG 790

Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQER--YPQG 260
           +E+ E+A+ARL + ++      +A  V+  ++E   +PQ 
Sbjct: 791 SEYTEQALARLSQVFLETDNYTKAIPVLKRLEESADFPQN 830


>gi|213026854|ref|ZP_03341301.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 93

 Score = 45.1 bits (105), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 43/85 (50%)

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS Y   A   +   +++LA  E  +  YY  RG +VA + R + +L NY D +   +
Sbjct: 2   YPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATRD 61

Query: 229 AMARLVEAYVALALMDEAREVVSLI 253
           A+  +  AY  + L  +A +V  +I
Sbjct: 62  ALPLMENAYRQMQLNAQADKVAKII 86


>gi|254446643|ref|ZP_05060119.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
           DG1235]
 gi|198260951|gb|EDY85259.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
           DG1235]
          Length = 369

 Score = 45.1 bits (105), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 87/205 (42%), Gaps = 7/205 (3%)

Query: 59  EVYEKAVLFLKE--QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           E +   +LF+    +N  +A +YF +     P++  A  SL+  A               
Sbjct: 152 ETHRDKILFVIPGFKNTDRAVQYFERIVAIAPYSDYAPLSLMNVAKAWSDKNSDSMTIYA 211

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            +  +T YP S      Y  +  ++  +I+   YDQRAT+  + +    + +Y  + +V 
Sbjct: 212 LDRLVTNYPNSFLTSDAYLKLAQTHYGLIKGPEYDQRATEDAITFFEDFLIQYPENLHVD 271

Query: 177 GARFYVTVGRNQLAAKEVEIGR-YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
            A   ++  +N L+  +V++   YY KR +Y AA   +   +     +  AE A  RL +
Sbjct: 272 QAETGLSGAKNILSMSKVKMADFYYYKRSKYDAAKILYNEAITIAPRSTAAELARTRLEK 331

Query: 236 AYVALALMDE----AREVVSLIQER 256
               +A  DE    +      IQER
Sbjct: 332 IDTIVAQSDETLTDSTPTNEQIQER 356


>gi|268317073|ref|YP_003290792.1| outer membrane assembly lipoprotein YfiO [Rhodothermus marinus DSM
           4252]
 gi|262334607|gb|ACY48404.1| outer membrane assembly lipoprotein YfiO [Rhodothermus marinus DSM
           4252]
          Length = 1000

 Score = 44.7 bits (104), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 23/190 (12%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            ++KA L  ++QN++ A E F +  R  P    A  +L  +A   Y  G+  +A +L  +
Sbjct: 438 AFQKAWLQYRQQNYAAASEAFLELYRQDPRGPKAGDALFWAAESFYQLGRLDRAEALFRD 497

Query: 120 YITQYPESKNVDYVYYLVG-------------MSYAQMIRDVPYDQRATKLMLQYMSRIV 166
           Y+  +P+  +V+  +Y +G              ++ Q +R     + A    L  + R+ 
Sbjct: 498 YLRSFPDGAHVEAAHYALGWVYFRQQRYEAAIQAFQQFLRAYRRTEEAVPYRLDALLRLA 557

Query: 167 ER-YTNSPYVKGARFYVTVGRNQLAAKEVE-----IGRYYLKRGEYVAAIPRFQLVLANY 220
           +  Y    Y +  R+Y    R   A  E +     IG+ Y   G Y  A+  F  +L  +
Sbjct: 558 DSYYALKRYPEAIRYY----RQAAAEGESDYALYQIGQAYYNAGNYEEALRTFNRLLEEH 613

Query: 221 SDAEHAEEAM 230
            ++   EEA+
Sbjct: 614 PESTWREEAL 623


>gi|325295382|ref|YP_004281896.1| tol-pal system protein YbgF [Desulfurobacterium thermolithotrophum
           DSM 11699]
 gi|325065830|gb|ADY73837.1| tol-pal system protein YbgF [Desulfurobacterium thermolithotrophum
           DSM 11699]
          Length = 242

 Score = 44.7 bits (104), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 58/144 (40%), Gaps = 22/144 (15%)

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
           V+ K L   AF    AG  + A S  E+ + QYP+S   D   Y +G  Y        Y 
Sbjct: 118 VSDKDLYKQAFNSMEAGDLETAKSTFEKLVEQYPDSPLADNALYWIGEIY--------YS 169

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
               +    Y  +++E+Y N               N++ A  +++   Y   GE   A  
Sbjct: 170 HNDYETAANYFKQVIEKYPNG--------------NKVPAAMLKLALSYKGMGELDKAKE 215

Query: 212 RFQLVLANYSDAEHAEEAMARLVE 235
            FQ V+  Y +   A  A A+L+E
Sbjct: 216 MFQQVIEKYPNTPEAGIAKAKLME 239



 Score = 41.6 bits (96), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 14/95 (14%)

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
           ++VE+Y +SP    A ++              IG  Y    +Y  A   F+ V+  Y + 
Sbjct: 145 KLVEQYPDSPLADNALYW--------------IGEIYYSHNDYETAANYFKQVIEKYPNG 190

Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
                AM +L  +Y  +  +D+A+E+   + E+YP
Sbjct: 191 NKVPAAMLKLALSYKGMGELDKAKEMFQQVIEKYP 225


>gi|301168517|emb|CBW28107.1| putative comtepence-related protein [Bacteriovorax marinus SJ]
          Length = 245

 Score = 44.7 bits (104), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 84/179 (46%), Gaps = 2/179 (1%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++++A   + +  +  A E  N     +P++  A  + L+ A V +    Y +AA+    
Sbjct: 29  LFKEAQDLINDSRYILATEKLNTLRSQYPYSFYATHAELLQADVLFKQENYVEAAAAYIL 88

Query: 120 YITQYPESKNVDYVYYLVGMS-YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           +   +P+ K   YV + +  S YAQ+      D  A    ++Y   ++  +++S Y KG+
Sbjct: 89  FKDFHPKHKKKAYVIWKIAESFYAQIPDTFDRDLSAAHEAVKYYQELLNFHSDSEYSKGS 148

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY-SDAEHAEEAMARLVEA 236
              + + +  +  KE  IG +Y K   + AA  R+  ++  + SD      +M R+VE+
Sbjct: 149 IDKIKLAQGMILDKERYIGDFYYKTNVFDAARYRYLSIIDRFKSDPMLLAHSMIRVVES 207


>gi|163782371|ref|ZP_02177369.1| hypothetical protein HG1285_06275 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882404|gb|EDP75910.1| hypothetical protein HG1285_06275 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 307

 Score = 44.3 bits (103), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 2/165 (1%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSR--DFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           +E Y +A+   KE+++  A   FN+  +  D+        +  + A   Y  G Y  A  
Sbjct: 33  QEYYREALSAYKEKDYGDAAWNFNEALKYMDYLTPKQIENAKFLLAKSYYYDGDYVNAVV 92

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
             E+YI  YP+ +  +  +YL+  SY  +  D   DQ  T   ++     + R+ NS + 
Sbjct: 93  ALEDYIFYYPKLRRTEEAFYLLIDSYINVSPDPYRDQEYTWKAIEKAKEFLSRFPNSTFA 152

Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
              +  +     ++A  E+ I ++Y   G   +A  R++ VL N+
Sbjct: 153 PKVQKLIDKAYRKIAQHELYIAKFYEDYGYTYSAALRYREVLINF 197


>gi|295135083|ref|YP_003585759.1| nuclear transition protein [Zunongwangia profunda SM-A87]
 gi|294983098|gb|ADF53563.1| nuclear transition protein [Zunongwangia profunda SM-A87]
          Length = 281

 Score = 43.9 bits (102), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 64/158 (40%), Gaps = 10/158 (6%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y  G Y  ++   E ++  YP S  V+   +    SY +       DQ  T   ++ +  
Sbjct: 89  YQVGDYYLSSFEFERFVQSYPNSDKVEEASFKSAKSYYEESPRFDLDQTDTNKAIEALQS 148

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY------LKRGEYVAAIPRFQLVLA 218
            + RY    Y + A    T  R +L  K  EI + Y       + G + AAI  F   +A
Sbjct: 149 YLNRYPEGEYAEEANLMATELRLKLEKKAFEIAKQYWRIGGNYREGNFTAAITSFNNFIA 208

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           +Y    + EEA     +A  + A+        +L+QER
Sbjct: 209 DYPGTPYREEAFYLRFDAAYSYAI----NSYRNLMQER 242


>gi|326334355|ref|ZP_08200568.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga sp. oral
           taxon 338 str. F0234]
 gi|325693439|gb|EGD35365.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga sp. oral
           taxon 338 str. F0234]
          Length = 266

 Score = 43.9 bits (102), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 57/138 (41%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
             ++L M A   Y   KY  AA   E +   YP S+  + V +L G  Y         DQ
Sbjct: 69  GEEALYMYADSYYKRKKYLLAAYQYERFTKNYPRSEKAEQVLFLQGKCYFLESPKYSLDQ 128

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
             T   L  +   ++RY NS  ++ A   V     +L  K  EI + Y K  +Y AAI  
Sbjct: 129 EGTYKALDALQEYIDRYPNSENLREANNMVLELLTKLQRKSFEIAKGYDKIRDYQAAIKS 188

Query: 213 FQLVLANYSDAEHAEEAM 230
           F   L     +   EEA+
Sbjct: 189 FDNFLIENPGSVFREEAL 206


>gi|288818733|ref|YP_003433081.1| DNA uptake lipoprotein [Hydrogenobacter thermophilus TK-6]
 gi|288788133|dbj|BAI69880.1| DNA uptake lipoprotein [Hydrogenobacter thermophilus TK-6]
 gi|308752320|gb|ADO45803.1| outer membrane assembly lipoprotein YfiO [Hydrogenobacter
           thermophilus TK-6]
          Length = 298

 Score = 43.9 bits (102), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 56/118 (47%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y    Y  A    E+++  YP+    +  Y+++  SY ++  D   DQ  T   +  +  
Sbjct: 78  YMNKDYINAVVYFEDFLFYYPDVSESEKAYFMLVDSYMKVAPDPYRDQTYTLKAIDKVKD 137

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
            + ++  SPY +  R  +   + +LA  E  IGR+Y   G Y +A  R++ +L NY +
Sbjct: 138 FLSKFPQSPYAERVRAIMEDAQRKLARHEYLIGRFYEDFGYYYSASLRYRDLLINYPE 195


>gi|225850549|ref|YP_002730783.1| hypothetical protein PERMA_0997 [Persephonella marina EX-H1]
 gi|225646376|gb|ACO04562.1| conserved hypothetical protein [Persephonella marina EX-H1]
          Length = 300

 Score = 43.5 bits (101), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 51/215 (23%), Positives = 93/215 (43%), Gaps = 23/215 (10%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQ 112
           +++V  K +   K+ ++ +A +   +    +   G+    L+ + F      Y   +Y  
Sbjct: 23  EKDVLHKGIQLYKKGDYEEAKDLLKKSI--YKVKGLTADELMKARFYLADSYYREEQYVD 80

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----RDVPYDQRATKLMLQYMSRIVER 168
           A    EE IT +P +  +D   Y +  SY ++     RD+ Y ++A    L+    ++E 
Sbjct: 81  AIVEFEELITLFPTAPFMDEALYKLADSYLKISPGVDRDMSYPEKA----LEKAEELIEN 136

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y +S Y   A+  +       A   +EI + Y K G+Y +A   +QL    Y D    ++
Sbjct: 137 YPDSKYAAKAKKIIHTVNKMKADHILEIAQLYEKLGKYYSASRYYQLAYDQYED--FIDK 194

Query: 229 AMARLVEAYVALAL-------MDEAREVVSLIQER 256
                  AY  +         MDE +E++S IQE+
Sbjct: 195 PFVEFKLAYNLMKTENQYKDEMDEYKEMISDIQEK 229


>gi|77918025|ref|YP_355840.1| hypothetical protein Pcar_0410 [Pelobacter carbinolicus DSM 2380]
 gi|77544108|gb|ABA87670.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
          Length = 222

 Score = 43.5 bits (101), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 37/69 (53%)

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           +G  Y   G+Y  A+  FQ V+ NY  +  A EA+ R+  A   L   ++AR+ +  +Q+
Sbjct: 148 LGECYYNLGQYDRAVQEFQKVVDNYPLSGKAPEALLRMAPALRQLNQYEKARQALQALQQ 207

Query: 256 RYPQGYWAR 264
           RYP    AR
Sbjct: 208 RYPNSAAAR 216


>gi|145641510|ref|ZP_01797088.1| conserved hypothetical lipoprotein [Haemophilus influenzae R3021]
 gi|145273801|gb|EDK13669.1| conserved hypothetical lipoprotein [Haemophilus influenzae 22.4-21]
          Length = 129

 Score = 43.5 bits (101), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 6/100 (6%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
           S+DV   SV       E+Y K    L+E ++S+A  Y    +  FP +    +++L   +
Sbjct: 23  SKDVEQASV------NELYTKGTTSLQEGSYSEAIRYLKATTERFPGSVYQEQAMLDLIY 76

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
             Y    Y Q   + + ++ Q+P+S N  Y  Y+ G++ A
Sbjct: 77  ANYKTQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNA 116


>gi|291288282|ref|YP_003505098.1| outer membrane assembly lipoprotein YfiO [Denitrovibrio acetiphilus
           DSM 12809]
 gi|290885442|gb|ADD69142.1| outer membrane assembly lipoprotein YfiO [Denitrovibrio acetiphilus
           DSM 12809]
          Length = 259

 Score = 43.1 bits (100), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 83/177 (46%), Gaps = 10/177 (5%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E  +  + + K+ N+ KA  YF     +     +A K+ L  A   +   KY +A    E
Sbjct: 30  ESMKTGMTYFKKGNYEKAVTYFENTLMEAETPEMAAKAQLFLADSYFLDKKYVEAIPAYE 89

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            ++  Y E+++ +     +G+S+   I  +  D  A +  L   +++ ++   SP    A
Sbjct: 90  LFLEIYGETEDANTAMLRLGLSHYAQIDTIDRDMSAAEGALNAFTKLRDK---SPAF--A 144

Query: 179 RFY-----VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
           R +     +   R+ LA +E+ + ++Y +  E  +A  R + +++NYSD    +EA+
Sbjct: 145 REFELNKKIVELRSMLAERELYVAKFYFRIKEPDSAEGRLKYLISNYSDTASYDEAL 201


>gi|149372318|ref|ZP_01891506.1| TPR repeat protein [unidentified eubacterium SCB49]
 gi|149354708|gb|EDM43271.1| TPR repeat protein [unidentified eubacterium SCB49]
          Length = 266

 Score = 42.7 bits (99), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 4/164 (2%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
            +K + + A   Y+ G Y  +    E +   YP+S +V    +    SY ++      DQ
Sbjct: 65  GQKLMFLYANAYYNLGDYTLSGYQFERFTISYPKSDSVVVAAFRGAKSYYELSPVYSLDQ 124

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
             T   L+ +   +  Y ++     A   V+  R++L  K  EI   YL+  +Y AAI  
Sbjct: 125 ADTNKALEKLQGFINNYPDADQRVEANEMVSDLRSKLDYKAFEIAEQYLRISDYKAAISA 184

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           +   +AN+  +E+ ++A    ++A   LA+        +L++ER
Sbjct: 185 YDNFIANHPGSEYRKDAFYGRLKASYELAI----NSFPALVEER 224


>gi|126661830|ref|ZP_01732829.1| TPR repeat protein [Flavobacteria bacterium BAL38]
 gi|126625209|gb|EAZ95898.1| TPR repeat protein [Flavobacteria bacterium BAL38]
          Length = 264

 Score = 42.7 bits (99), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 1/134 (0%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y + +Y  A    E ++  YP+S+  +   +     + ++      DQ  T   L  M  
Sbjct: 77  YKSNQYYLAGYQLENFVATYPKSEKREESAFYAAECFYKLSPKYSLDQTDTSKALDKMQH 136

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
            ++ Y +S ++  A  YV   R +L  K  EI + Y    +Y  A+   +  LA+Y    
Sbjct: 137 FIDVYPDSQFLTQANVYVKELREKLEKKAFEIAKQYNTISDYKGALKALENFLADYPGTP 196

Query: 225 HAEEAM-ARLVEAY 237
             E+A+  RL  AY
Sbjct: 197 FKEQALYYRLDSAY 210


>gi|213585273|ref|ZP_03367099.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-0664]
          Length = 99

 Score = 42.7 bits (99), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 39/80 (48%)

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
           D +  +      S++V  Y NS Y   A   +   +++LA  E  +  YY  RG +VA +
Sbjct: 15  DPQHARAAFNDFSKLVRSYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARGAWVAVV 74

Query: 211 PRFQLVLANYSDAEHAEEAM 230
            R + +L NY D +   +A+
Sbjct: 75  NRVEGMLRNYPDTQATRDAL 94


>gi|255038956|ref|YP_003089577.1| outer membrane assembly lipoprotein YfiO [Dyadobacter fermentans
           DSM 18053]
 gi|254951712|gb|ACT96412.1| outer membrane assembly lipoprotein YfiO [Dyadobacter fermentans
           DSM 18053]
          Length = 320

 Score = 42.7 bits (99), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 83/187 (44%), Gaps = 21/187 (11%)

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD-VPY--DQRATKL 157
           A+ QY  G+Y  +  L +++   Y  S   DY    + M    + +D  PY  DQ +T  
Sbjct: 91  AYTQYHQGQYNTSQFLFKKFYDTYARS---DYAQEALYMHAFSLYKDSSPYNLDQSSTFT 147

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY-----VAAIPR 212
            +  M   +  Y +SP+ +    Y+   R++L  K  E  R Y K  ++      +A+  
Sbjct: 148 AISAMQDFINAYPDSPFREECTRYILELRSKLEKKAYERARLYHKISDFNPMSLKSAVIS 207

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAR----EVVSLIQE---RYPQGYW 262
            +    ++ D+++ EE     VE+   LA    +D+ +    EVV   QE   +YP G +
Sbjct: 208 IENFRKDFPDSQYNEELAFLKVESQYNLASNSFIDKQKERYQEVVKFYQELVDKYPTGKY 267

Query: 263 ARYVETL 269
            R  E +
Sbjct: 268 NRDAERM 274


>gi|322421378|ref|YP_004200601.1| outer membrane assembly lipoprotein YfiO [Geobacter sp. M18]
 gi|320127765|gb|ADW15325.1| outer membrane assembly lipoprotein YfiO [Geobacter sp. M18]
          Length = 260

 Score = 42.7 bits (99), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 39/188 (20%), Positives = 78/188 (41%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           ++F +A   F +    +    ++ ++ L  A   +    + +AA+  E +   +P ++ V
Sbjct: 45  RHFEEAITQFKKVKESYSSPELSAQAELKIADAYFENDAFIEAAAEYESFRKLHPTNEKV 104

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
            Y  Y   +S    I  +  DQ   K  + Y+   + +Y  S +   AR  ++  R +  
Sbjct: 105 PYALYRQALSNYSQITGIDTDQTPVKNAVHYLEMFLAQYPGSEHAADARAKLSDCRAKEL 164

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
           A E  +G +Y++  +Y +AI R    L  +       + ++ L +AY        A E  
Sbjct: 165 AYENYVGNFYVRTKKYPSAIKRLNEALERFPGEPGLADTLSYLEQAYRKSGDAARAEEAR 224

Query: 251 SLIQERYP 258
             +   YP
Sbjct: 225 KRLAAEYP 232


>gi|163756996|ref|ZP_02164102.1| lipoprotein protein, putative [Kordia algicida OT-1]
 gi|161323000|gb|EDP94343.1| lipoprotein protein, putative [Kordia algicida OT-1]
          Length = 264

 Score = 42.7 bits (99), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 6/154 (3%)

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           E ++  YP+S ++    +    SY         DQR T   +  +   +  Y +S Y+  
Sbjct: 90  ERFVRSYPKSDSIQSAAFYEAKSYYMESPRYSIDQRETIKAINKLQSFINNYPDSKYLDN 149

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           A   V     ++  K  EI + Y    +Y ++I   +  L++Y      E+AM   ++A 
Sbjct: 150 ANVMVDELTTKIEKKAYEIAKQYNTISDYKSSIKAVENFLSDYPGTSFREDAMFLKLDAM 209

Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
             LA     +   SL++ RY +   A   +TLVK
Sbjct: 210 YNLA----TKSFASLMEGRYNEA--ASAYKTLVK 237


>gi|320105768|ref|YP_004181358.1| outer membrane assembly lipoprotein YfiO [Terriglobus saanensis
           SP1PR4]
 gi|319924289|gb|ADV81364.1| outer membrane assembly lipoprotein YfiO [Terriglobus saanensis
           SP1PR4]
          Length = 596

 Score = 42.4 bits (98), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 12/152 (7%)

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ--RATKLMLQYMSRIVERYTNSPYV 175
           +++IT +P +         VG  Y + + D P     +A     +Y + +++++ +S  +
Sbjct: 187 KDFITFFPNAPEAAEAQMRVGDIYFKQM-DTPDRDYTKAVHAQEEYRT-MLQQFPDSTLI 244

Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
            GA+  +   +  LA +E  I  +Y  R  + A+I R+Q V+  Y    H++EA+  L +
Sbjct: 245 PGAKQRLREVQEVLATRETNIAAFYAGRENWPASIARYQTVVDTYPIFSHSDEALIGLGD 304

Query: 236 AYVALALMDEAREVVSLIQERYPQGYWARYVE 267
           A+ A     EAR V  +   + P+G  AR V+
Sbjct: 305 AFAA-----EARMVRVM---KLPEGAKARLVK 328


>gi|145641511|ref|ZP_01797089.1| conserved hypothetical lipoprotein [Haemophilus influenzae R3021]
 gi|145273802|gb|EDK13670.1| conserved hypothetical lipoprotein [Haemophilus influenzae 22.4-21]
          Length = 124

 Score = 42.4 bits (98), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 44/91 (48%)

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
            +V  + NSPY + A   +   ++ LA  E+EI ++Y KR  +VA   R   +L  Y D 
Sbjct: 10  NLVRVFPNSPYAQDALARMAYIKDALARHELEIAKFYAKRKAWVAVANRVVGMLKQYPDT 69

Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
           +   E +  + EAY  + L   A +   +I 
Sbjct: 70  KATYEGLFLMQEAYEKMGLTALANDTQKIID 100


>gi|319955738|ref|YP_004167005.1| outer membrane assembly lipoprotein yfio [Cellulophaga algicola DSM
           14237]
 gi|319424398|gb|ADV51507.1| outer membrane assembly lipoprotein YfiO [Cellulophaga algicola DSM
           14237]
          Length = 274

 Score = 42.4 bits (98), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 37/182 (20%), Positives = 74/182 (40%), Gaps = 16/182 (8%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y    Y  A    E ++  YP+S       +LV  SY  +  D   DQ  T   LQ +  
Sbjct: 81  YQIKDYNTAGYQFERFLKSYPKSDKAQESGFLVAKSYYMLSPDYSLDQTDTDKALQKLQT 140

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY------VAAIPRFQLVLA 218
            +  +  S ++  A         +   K +EIG+ + K GEY      ++A       + 
Sbjct: 141 FINTFPESEFMPEANQMAKDLTQKKELKAIEIGKQFTKLGEYYTLDFSISAAAAMDNFIL 200

Query: 219 NYSDAEHAEEAMARLVEAYVALAL----------MDEAREVVSLIQERYPQGYWARYVET 268
           ++  + + E+A+   ++A   LAL          + EA+   + +++ +P+  + +    
Sbjct: 201 DFPGSIYKEDALFYKMKALSNLALNSTEQKKKERLQEAKTAYNTLKKNFPETQFEKDANN 260

Query: 269 LV 270
           ++
Sbjct: 261 MM 262


>gi|332882672|ref|ZP_08450284.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332679472|gb|EGJ52457.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 287

 Score = 42.4 bits (98), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 51/215 (23%), Positives = 84/215 (39%), Gaps = 47/215 (21%)

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR----------------- 146
           QY A KY++A  L E+  ++Y      + +Y+L G +Y QM +                 
Sbjct: 60  QYKAKKYRKAVKLFEQIASEYSGKPQGERLYFLQGDAYYQMKQYSLATYPFERLQKIYPR 119

Query: 147 -----------------DVPY---DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
                             VP    DQ  T   L+ +   ++RY++S Y K A   +    
Sbjct: 120 SAKAVEAAFLEAKSLYMQVPTYSVDQTYTYQALEKLQYFMDRYSDSDYAKEANELILNLL 179

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM-ARLVEAY-------- 237
            QL  KE EI + Y    +Y AA+      LAN   +   E+A+  RL  AY        
Sbjct: 180 TQLQKKEFEIAKQYDLIRDYQAAMKSLDNFLANNPGSVFREDALYTRLHSAYEWAINSVE 239

Query: 238 -VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
                 +D A+E    +   +P+  + +  + ++K
Sbjct: 240 SKQKERLDTAKEAYDTLLRAFPETKYKKEADNMLK 274


>gi|220907898|ref|YP_002483209.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC
           7425]
 gi|219864509|gb|ACL44848.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425]
          Length = 689

 Score = 42.4 bits (98), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 8/127 (6%)

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           + LL  A+  Y AG+  +A+ L +  + Q+P   +   V  ++      +   + Y ++A
Sbjct: 5   QKLLTQAYRHYQAGELAEASQLYQRVLQQHPGQLDALQVLGMIAAQQGDVETAISYFRQA 64

Query: 155 TKLM-----LQY-MSRIVERYTNSPYVKGA-RFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
            ++      L Y +   +E + + P    A +  + + RN LAA    +G  +L+RGEY 
Sbjct: 65  VQVAPAQADLHYNLGYALEAWGDGPAAIAAYQQALKLNRNHLAAC-YNLGELHLQRGEYA 123

Query: 208 AAIPRFQ 214
            AIP FQ
Sbjct: 124 GAIPCFQ 130


>gi|291280327|ref|YP_003497162.1| hypothetical protein DEFDS_1955 [Deferribacter desulfuricans SSM1]
 gi|290755029|dbj|BAI81406.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
          Length = 252

 Score = 42.0 bits (97), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 1/166 (0%)

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
           +A K+ L  A   Y   KY  A +  + Y+  Y    +       +G+SY  M++ +  D
Sbjct: 66  LAAKAQLFLADSYYLDEKYDDAIAAYKSYLELYENQPDAKRALLRLGLSYYAMLQPIDRD 125

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           Q  T+       ++  +Y            +   +N LA K+  + ++Y++ GE  AAI 
Sbjct: 126 QSYTREAYNTFLKLNAKYPEFSKKYNIPAKLRKLKNMLAEKDFYVAKFYVRIGEDKAAIV 185

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS-LIQER 256
           R + +L  Y D +   EA     +  + +   D+A  V+S L++ER
Sbjct: 186 RLEKILKEYKDTKVYPEAALLYAKVLINIKKPDKAVSVLSQLLKER 231


>gi|146301211|ref|YP_001195802.1| DNA uptake lipoprotein-like protein [Flavobacterium johnsoniae
           UW101]
 gi|146155629|gb|ABQ06483.1| DNA uptake lipoprotein-like protein [Flavobacterium johnsoniae
           UW101]
          Length = 264

 Score = 42.0 bits (97), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 78/184 (42%), Gaps = 4/184 (2%)

Query: 73  FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
           ++KA   F Q +  +     A K   M +   Y   +Y  A    E +++ YP S+ V  
Sbjct: 45  YNKAIRLFEQLAPTYRGKPQAEKLFYMFSQSYYKTKQYYLAGYQFESFVSGYPRSEKVQE 104

Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
             +L   SY+++      DQ  T   L  +   ++ Y NS Y+  A   V +   +L  K
Sbjct: 105 AAFLGAYSYSKLAPVYSLDQADTVKALDKLQAFIDNYPNSEYLAQANESVKILNGKLEKK 164

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
             E  + Y    +Y +A+  F   +A++      E+A+    ++   LA+      V S 
Sbjct: 165 AYENAKGYNTISDYKSALVAFDNFIADFPGTPLKEDALFYKYDSAYQLAI----NSVPSK 220

Query: 253 IQER 256
           ++ER
Sbjct: 221 MEER 224


>gi|206889500|ref|YP_002249884.1| TPR domain protein, putative [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|206741438|gb|ACI20495.1| TPR domain protein, putative [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 287

 Score = 42.0 bits (97), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 28/123 (22%), Positives = 61/123 (49%), Gaps = 8/123 (6%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S   ++  +E+Y+ A + +KE+ ++ A + F + ++++P   +   S        YS  K
Sbjct: 137 SPGQLKNPKEIYDSAHVDIKEKRYASARDKFQEITKNYPDFELLPNSYFWIGETYYSEKK 196

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y+ A    EE++ +YP+           GM++ ++      D++  K++ +   R++ERY
Sbjct: 197 YEDAILAYEEFLKKYPKHDKAPGALLKEGMAFLEL-----KDKKTAKVVFE---RVIERY 248

Query: 170 TNS 172
             S
Sbjct: 249 PKS 251


>gi|253582116|ref|ZP_04859340.1| tetratricopeptide repeat family protein [Fusobacterium varium ATCC
           27725]
 gi|251836465|gb|EES65002.1| tetratricopeptide repeat family protein [Fusobacterium varium ATCC
           27725]
          Length = 950

 Score = 42.0 bits (97), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 83/192 (43%), Gaps = 23/192 (11%)

Query: 36  VGWERQSSRDVY---LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPF 89
              E   + D Y   LD   D  Y+R +Y+  + +L ++N+SKA E F    Q ++ +  
Sbjct: 108 TALEDTKNSDFYMEALDKNGDF-YERALYDSGMTYLAKENYSKAEEMFQRVIQMNKKY-- 164

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----- 144
                +++L  A   Y+   Y++      EY     ++KN   +YYL G +Y ++     
Sbjct: 165 ---YSEAILSMAMSSYNKADYKKTLLFLNEYSNGKDKNKNQSLLYYLYGSTYYKLNSTED 221

Query: 145 ----IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV--EIGR 198
                + V    + +    + +  ++E Y+N   V   + Y+T+  N     E    IG 
Sbjct: 222 AIVYFQKVANKDKISSYGKKSILSLIEIYSNRGDVNSMQRYLTMLENTKEYGEAMRMIGD 281

Query: 199 YYLKRGEYVAAI 210
            Y  RGEY  A+
Sbjct: 282 LYATRGEYEKAV 293


>gi|325288190|ref|YP_004263980.1| outer membrane assembly lipoprotein YfiO [Cellulophaga lytica DSM
           7489]
 gi|324323644|gb|ADY31109.1| outer membrane assembly lipoprotein YfiO [Cellulophaga lytica DSM
           7489]
          Length = 270

 Score = 41.6 bits (96), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 40/176 (22%), Positives = 70/176 (39%), Gaps = 6/176 (3%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YE A  F  E +F +A     Q +  +       + +   A   Y  G+Y  A    E +
Sbjct: 33  YEMAEKFYDEGDFKRANRLLEQIASKYIGKPQGERVMFFFANSYYQIGQYNDAGYQFERF 92

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +  YP S+ +    +L   SY+ + R    DQ  T   L  +   +  Y +S Y+  A  
Sbjct: 93  VKAYPRSEKMQEASFLGAKSYSYLSRKYSLDQTDTDKALLKIQNFINTYPDSEYLPEANE 152

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEY------VAAIPRFQLVLANYSDAEHAEEAM 230
                  +   K +EI + + K GE+      ++AI   +  + +     + EEA+
Sbjct: 153 IAASLTRKKEKKALEIAKQFTKLGEFYDLEYSISAIKALENFMLDNPGTIYKEEAL 208


>gi|327402044|ref|YP_004342882.1| outer membrane assembly lipoprotein YfiO [Fluviicola taffensis DSM
           16823]
 gi|327317552|gb|AEA42044.1| outer membrane assembly lipoprotein YfiO [Fluviicola taffensis DSM
           16823]
          Length = 262

 Score = 41.6 bits (96), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 38/163 (23%), Positives = 66/163 (40%), Gaps = 14/163 (8%)

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
           ++P S  V+   +L  +   +   +   DQ  T + L  +   V R+ NS  +    F +
Sbjct: 94  KFPYSPKVEETMFLAALCAVENSPEASLDQHETDVALNELQSFVSRFPNSERLDTCNFVM 153

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
              R +L  K+    + Y K   Y AA+   Q  L NY  + + E+  A L+     LA+
Sbjct: 154 DKLRLKLEHKDFMNVKLYSKTENYRAAVVSSQQFLDNYPRSLNREDCWAILIRNSYHLAI 213

Query: 243 ----------MDEAREVVSLIQERYPQGYWAR----YVETLVK 271
                     +D+  E  ++    +P   + R    YVE + K
Sbjct: 214 NSIDAKLEERIDQTIERFNIFLVEFPNSNYLREFEGYVEKVKK 256


>gi|300775415|ref|ZP_07085277.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
 gi|300506155|gb|EFK37291.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
          Length = 331

 Score = 41.6 bits (96), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 55/137 (40%), Gaps = 6/137 (4%)

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
           + DFP  G        +A+  Y    Y+ A    + +   +P+    +   Y+  + Y +
Sbjct: 63  TDDFPNVG------FNTAYANYYDKSYKLAGHQFKNFAVSFPKDPRAEEAAYMSALCYYE 116

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
              D   DQ +T+L +  +   +  Y NS   K     +     +L  K  E  R Y K 
Sbjct: 117 GSMDYNLDQSSTELAINELQDFLNNYPNSERSKNISQLIDELSYKLEFKAYENARQYYKM 176

Query: 204 GEYVAAIPRFQLVLANY 220
           GEY AA   F  VL ++
Sbjct: 177 GEYKAANVAFDNVLEDF 193


>gi|319790450|ref|YP_004152083.1| tol-pal system protein YbgF [Thermovibrio ammonificans HB-1]
 gi|317114952|gb|ADU97442.1| tol-pal system protein YbgF [Thermovibrio ammonificans HB-1]
          Length = 233

 Score = 41.6 bits (96), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 27/116 (23%), Positives = 56/116 (48%), Gaps = 8/116 (6%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +++Y +A   ++  NF KA + F Q  + +P + +A  +L     + YS   YQ AA+  
Sbjct: 112 KDLYRQAFDAMEAGNFDKAQQLFEQLVQQYPDSDLADNALYWIGEIYYSHNDYQTAANYF 171

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
           ++ I +YP    V      + + Y    R +   Q+A ++    +  ++++Y  +P
Sbjct: 172 QQVIDKYPNGNKVPAAMLKLALCY----RGMGNTQKAKEI----LKEVIDKYPGTP 219


>gi|282878378|ref|ZP_06287170.1| outer membrane assembly lipoprotein YfiO [Prevotella buccalis ATCC
           35310]
 gi|281299564|gb|EFA91941.1| outer membrane assembly lipoprotein YfiO [Prevotella buccalis ATCC
           35310]
          Length = 282

 Score = 41.2 bits (95), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 7/183 (3%)

Query: 26  IFF--SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           +FF  +I V  L G        VY  + T+ RY+   Y K   F  +  +++A    N  
Sbjct: 6   LFFISTICVALLFGSCASEFNAVYKSTDTNYRYE---YAKECFF--KGKYTRAITLLNDL 60

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
                    A++SL M A  QY +G Y+ AA   + Y+  YP+ K  +   Y VG S   
Sbjct: 61  IVVQKGTENAQESLYMLAMAQYKSGDYESAAQAFKRYVQSYPKGKYAELASYYVGESLFM 120

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
              +   DQ  T   +      ++ + ++     A+  +   +++L  KE+   + Y   
Sbjct: 121 CTPEPRLDQSQTVSAIASFQEFLDLFPDAKLKNSAQNRLFELQDKLVKKELYSAQLYYDL 180

Query: 204 GEY 206
           G Y
Sbjct: 181 GPY 183


>gi|195953522|ref|YP_002121812.1| putative lipoprotein [Hydrogenobaculum sp. Y04AAS1]
 gi|195933134|gb|ACG57834.1| putative lipoprotein [Hydrogenobaculum sp. Y04AAS1]
          Length = 308

 Score = 41.2 bits (95), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 61/150 (40%), Gaps = 5/150 (3%)

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
           E+N  +A +Y    + +        ++  M A   Y    Y  A    E ++  YP S  
Sbjct: 56  EENLKRALKYLENLTPE-----QIERARFMLAKSYYLDHDYTNAIIYLESFLYYYPNSPE 110

Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
                Y++  SY ++  D   DQ  T   +      + +Y N+PY    R  +   R ++
Sbjct: 111 APQATYMLIKSYYKIAPDAYRDQTYTYKAIDLAKEFLSKYPNNPYDSDVRALIDKARQKI 170

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
           A  +  I ++Y   G Y  A  R++ +L N
Sbjct: 171 AKHDELIAKFYEDYGFYYPAAERYKDMLIN 200


>gi|86131754|ref|ZP_01050351.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
 gi|85817576|gb|EAQ38750.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
          Length = 270

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 37/173 (21%), Positives = 74/173 (42%), Gaps = 14/173 (8%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y  G Y Q     E ++  +P+S+  +   Y    SY         DQ  T + +  +  
Sbjct: 77  YELGDYYQGGYQFERFVKSFPQSEKREEAAYKSAESYYNRSPRFNLDQGDTYIAMGKLQD 136

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK----RGEYVAAIPRFQLVLANY 220
            + +Y +S  +  A   V     ++  K  EI + Y K    RG +  AI  F   L ++
Sbjct: 137 FINQYPDSERLDDANAKVQELNQKIERKAYEIAKGYNKIGESRGTFPNAIKAFDNFLLDF 196

Query: 221 SDAEHAEEAMARLVEAYVALAL----------MDEAREVVSLIQERYPQGYWA 263
             +++ E+A+     +   LAL          +++A+E  + +++ +P+G ++
Sbjct: 197 PGSKYREDALYWKFNSTYQLALGSVRRRKAERLEDAKEAYNALEKYFPEGKYS 249


>gi|198282219|ref|YP_002218540.1| tol-pal system protein YbgF [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218666817|ref|YP_002424584.1| hypothetical protein AFE_0070 [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|198246740|gb|ACH82333.1| tol-pal system protein YbgF [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218519030|gb|ACK79616.1| conserved hypothetical protein [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 272

 Score = 40.4 bits (93), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 5/74 (6%)

Query: 199 YYLKRGEYV-----AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           Y+L + +YV     AA+    +V A +S +  A EAM R+ E Y A+    +AR V+S I
Sbjct: 189 YWLGQAQYVLGQNDAALKSLHVVEAQFSQSSKAPEAMLRMAEIYQAIGQSGKARTVLSKI 248

Query: 254 QERYPQGYWARYVE 267
             +YP    A+  E
Sbjct: 249 ISQYPSTPSAQKAE 262


>gi|298529295|ref|ZP_07016698.1| tol-pal system protein YbgF [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298510731|gb|EFI34634.1| tol-pal system protein YbgF [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 292

 Score = 40.4 bits (93), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 31/141 (21%), Positives = 68/141 (48%), Gaps = 8/141 (5%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
           S D  L+ V D +  R +Y++A+    ++ + +A   + + + ++P   +   +      
Sbjct: 156 SDDPDLEPVGDPQTARALYQRALDSFYDREYERAQSLWEEFAENYPEHDLISNAYFWQGE 215

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y   +Y +AA   +E I+ YP+S  +       GMS+ ++ R     + A +L+L   
Sbjct: 216 SFYQMQEYAEAALAYQEVISNYPDSNKITASMLKQGMSFIELGR-----EEAGQLVL--- 267

Query: 163 SRIVERYTNSPYVKGARFYVT 183
           + ++E Y +S   + AR +++
Sbjct: 268 NELLEEYPDSAEARRARAFIS 288


>gi|255034845|ref|YP_003085466.1| TPR repeat-containing protein [Dyadobacter fermentans DSM 18053]
 gi|254947601|gb|ACT92301.1| TPR repeat-containing protein [Dyadobacter fermentans DSM 18053]
          Length = 1019

 Score = 40.4 bits (93), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 30/138 (21%), Positives = 62/138 (44%), Gaps = 22/138 (15%)

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           I+QYP+SK++D  Y+         + D+ +  ++    ++  +R++     S  +  A  
Sbjct: 628 ISQYPQSKHLDNAYF--------QLADIDFQNQSYSAAVKGFTRMINEKPKSTLIPAAL- 678

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
                        +   + Y     Y  AI  F+ +L  YSD+  AE A+  + E+Y A+
Sbjct: 679 -------------LRRAQSYYNLQVYEQAIVDFRKILTEYSDSPSAESALEGIQESYSAV 725

Query: 241 ALMDEAREVVSLIQERYP 258
              +E  +V+ ++++  P
Sbjct: 726 GRPEEFNQVLGVVRKNNP 743



 Score = 37.0 bits (84), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 27/152 (17%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y A KY+ A +  +E++  YP SK+     Y +  SY +  R            LQY S+
Sbjct: 760 YYAEKYENAITSLQEFLKSYPASKHQYDATYFIASSYDKTNR--------VNEALQYYSK 811

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V++         ++F   VG     + E+EIG     RG +  A+  F+++  N  + +
Sbjct: 812 VVQQ-------NRSQF---VGAAAQRSAELEIG-----RGNFNNAVTNFRVLSRNAENKK 856

Query: 225 HAEEAMARLVEAYVALALMDE----AREVVSL 252
               A   L++ Y  L   D     A+E++++
Sbjct: 857 DQATAWTGLMDTYFTLKSYDSTLYYAKEIINM 888


>gi|330901399|gb|EGH32818.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
           japonica str. M301072PT]
          Length = 167

 Score = 40.4 bits (93), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 36/67 (53%)

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           E+ +  YYL R  YVAA  R + V+ N+ +     + +A +VE+Y  L L D A   + +
Sbjct: 3   EIHVADYYLTRQAYVAAANRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEV 62

Query: 253 IQERYPQ 259
           ++  YP 
Sbjct: 63  LKTNYPN 69


>gi|237738478|ref|ZP_04568959.1| tetratricopeptide repeat family protein [Fusobacterium mortiferum
           ATCC 9817]
 gi|229420358|gb|EEO35405.1| tetratricopeptide repeat family protein [Fusobacterium mortiferum
           ATCC 9817]
          Length = 942

 Score = 40.0 bits (92), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 59/151 (39%), Gaps = 25/151 (16%)

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           KY+ A   GEEYI+QYP  +N   V     +SY +M                   +  E 
Sbjct: 561 KYEDAIKYGEEYISQYPNGENRAEVLDKTALSYFRMDN---------------FEKSKEY 605

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           YT    +     Y T           +I   Y  +G+Y  A+ ++Q V   Y D+++ E 
Sbjct: 606 YTQLQSIPNYNEYAT----------FQIADSYYAQGKYDEALGKYQEVYTKYPDSKYGES 655

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           A    + + + L   DE  +      ++YP 
Sbjct: 656 ANYWYLNSLINLKKYDEFEKAKEEFIKKYPN 686


>gi|15606494|ref|NP_213874.1| hypothetical protein aq_1273 [Aquifex aeolicus VF5]
 gi|18202108|sp|O67310|Y1273_AQUAE RecName: Full=UPF0169 lipoprotein aq_1273; Flags: Precursor
 gi|2983713|gb|AAC07276.1| putative protein [Aquifex aeolicus VF5]
          Length = 306

 Score = 40.0 bits (92), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 14/175 (8%)

Query: 56  YQREVYEKAVLFLKE-------QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           Y +E YEK +   ++        NF KA  Y    +   P      K LL+ +   Y   
Sbjct: 32  YAKEFYEKGLSEYRKGDYGDAKSNFEKALNYLEHLT---PEQIKKVKYLLVKS--AYKDK 86

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
            Y  A    E+++  YP SK  + V+Y++  S  ++  D   DQ  T   ++     + +
Sbjct: 87  DYVDAVVYAEDFLANYPGSKEAEEVFYILVDSLVKVAPDPYRDQTYTVEAIRKAKEFLAK 146

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG-EYVAAIPRFQLVLANYSD 222
           Y +S + +     +     +LA  E  I ++Y + G  Y AAI R++ VL N+ +
Sbjct: 147 YPDSRFTRKVEEVIEEANKKLAYHEYYIAKFYEEYGYPYNAAI-RYREVLINFPE 200


>gi|260173188|ref|ZP_05759600.1| TPR domain-containing protein [Bacteroides sp. D2]
 gi|315921462|ref|ZP_07917702.1| TPR domain-containing protein [Bacteroides sp. D2]
 gi|313695337|gb|EFS32172.1| TPR domain-containing protein [Bacteroides sp. D2]
          Length = 1005

 Score = 40.0 bits (92), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 23/107 (21%)

Query: 162 MSRIVERYTNSPYVKGA-----RFYVTVGRNQLAA---KEV---------------EIGR 198
           ++R+V +Y +SPY   A     R YV +  N  A    KE+               EIG 
Sbjct: 606 LNRLVGKYPSSPYAVNAIYEKGRSYVLMDNNNQAITSFKELLSKYPESPVSRKAAAEIGL 665

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
            Y ++G+Y  AI  ++ V+  Y  +E A  AM  L   YV L  +DE
Sbjct: 666 LYYQKGDYNQAIGAYKEVIEKYPGSEEARLAMRDLKSIYVDLNRIDE 712


>gi|973202|gb|AAC13872.1| unknown [Dichelobacter nodosus]
          Length = 106

 Score = 40.0 bits (92), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 3/69 (4%)

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LM 243
           N L   ++EI  +YL++G++VAA  R + +L +Y     A  A+A ++ AY  L    L 
Sbjct: 1   NLLGKHDLEIADFYLRKGDFVAAAARAKNILEHYETTPSAPYALAIMIRAYRELGQKLLA 60

Query: 244 DEAREVVSL 252
           D+A  V ++
Sbjct: 61  DDAMRVFNM 69


>gi|108760033|ref|YP_631571.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622]
 gi|108463913|gb|ABF89098.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622]
          Length = 1219

 Score = 39.7 bits (91), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 1/76 (1%)

Query: 65  VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
           V++ KE+N  KA E F +   DFP +  A ++L  +  +   AG+  +  + GE ++ +Y
Sbjct: 745 VVYKKEKNPKKAAEEFLRFVSDFPKSENADRALTYAMVIAQEAGEIDKGLAAGERFLKEY 804

Query: 125 PESK-NVDYVYYLVGM 139
           P S   +   Y L G+
Sbjct: 805 PRSPFELKARYSLAGL 820


>gi|83815586|ref|YP_446179.1| TPR repeat-containing protein [Salinibacter ruber DSM 13855]
 gi|294508105|ref|YP_003572163.1| Conserved hypothetical protein containing tetratricopeptide repeat
           domain [Salinibacter ruber M8]
 gi|83756980|gb|ABC45093.1| tetratricopeptide repeat domain protein [Salinibacter ruber DSM
           13855]
 gi|294344433|emb|CBH25211.1| Conserved hypothetical protein containing tetratricopeptide repeat
           domain [Salinibacter ruber M8]
          Length = 284

 Score = 39.7 bits (91), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 86/204 (42%), Gaps = 14/204 (6%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           E Y+K V  ++E +  +A  +F    +  R   +A  AR  L M+   Q    K+  AA+
Sbjct: 34  EAYKKGVAEMEEGDHQQAIRFFRAVFEYGRGNEWAPDARFKLAMA---QRGLNKHLVAAN 90

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY--DQRATKLMLQYMSRIVERYTNSP 173
             + +   Y   + +    +    SY   +R   Y  DQ  ++  +      ++R+ N  
Sbjct: 91  EFQRFTQLYRNDELLPRAEFERANSY--YLRSPSYRLDQSDSEQAISLFRLFIDRHPNHE 148

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
            V  A   +   R +LA K+ E GR Y +R  + AA   ++     Y D   A++A+   
Sbjct: 149 LVPEAEEKINELRAKLARKKYEAGRLYEQRDMWQAATTVYERAFDQYPDTPWADDALLGA 208

Query: 234 VEAYVALALMDEAREVVSLIQERY 257
           V  Y+  A     R V S   ERY
Sbjct: 209 VRTYIRYA----DRSVESKQAERY 228


>gi|160884096|ref|ZP_02065099.1| hypothetical protein BACOVA_02072 [Bacteroides ovatus ATCC 8483]
 gi|156110438|gb|EDO12183.1| hypothetical protein BACOVA_02072 [Bacteroides ovatus ATCC 8483]
          Length = 1005

 Score = 39.7 bits (91), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 23/107 (21%)

Query: 162 MSRIVERYTNSPYVKGA-----RFYVTVGRNQLAA---KEV---------------EIGR 198
           ++R+V +Y  SPY   A     R YV +  N  A    KE+               EIG 
Sbjct: 606 LNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEIGL 665

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
            Y ++G+Y  AI  ++ V+  Y  +E A  AM  L   YV L  +DE
Sbjct: 666 LYYQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLKSIYVDLNRIDE 712


>gi|289548801|ref|YP_003473789.1| outer membrane assembly lipoprotein YfiO [Thermocrinis albus DSM
           14484]
 gi|289182418|gb|ADC89662.1| outer membrane assembly lipoprotein YfiO [Thermocrinis albus DSM
           14484]
          Length = 301

 Score = 39.7 bits (91), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 4/111 (3%)

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           E+++  YP     +  +Y +  SY ++  D   DQ  T   L      + +Y +SPY   
Sbjct: 94  EDFVASYPGLPETERAFYQLVDSYMKVAPDAYRDQSYTLKALDKAREFLSKYPSSPYADK 153

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY----SDAE 224
               +     +LA  +  I R+Y   G Y +A  R++ +L NY    SDAE
Sbjct: 154 VGDLIQQAVEKLAKHQYLIARFYEDYGYYYSAALRYRDLLINYPEQISDAE 204


>gi|325300114|ref|YP_004260031.1| Tetratricopeptide TPR_2 repeat-containing protein [Bacteroides
           salanitronis DSM 18170]
 gi|324319667|gb|ADY37558.1| Tetratricopeptide TPR_2 repeat-containing protein [Bacteroides
           salanitronis DSM 18170]
          Length = 1003

 Score = 39.7 bits (91), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 83/208 (39%), Gaps = 33/208 (15%)

Query: 51  VTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS--- 106
           V D R   +VY +        + F++A   + Q S   P  G    SL   AFV+     
Sbjct: 540 VKDRRIVADVYNRMGDCHFHARRFAEASALYAQASAADPSLG--DYSLFQEAFVKGLQRD 597

Query: 107 -AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
            AGK Q    L    +T YP S  +D   Y  G ++ Q   +    +R T L+       
Sbjct: 598 YAGKIQTLNRL----LTDYPASPYIDDALYEQGRAFVQQENNAGAIERYTVLL------- 646

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
            +R+  SP  + A                EIG  Y +  +Y  AI  ++ V+++Y  +E 
Sbjct: 647 -QRFPESPLSRKA--------------SNEIGLLYYQEDKYSEAIAAYKKVISDYPGSEE 691

Query: 226 AEEAMARLVEAYVALALMDEAREVVSLI 253
           A  A   L   Y+ L  +D+    VS +
Sbjct: 692 ARLAQRDLKSIYIDLNRVDDYLSFVSTL 719


>gi|299144753|ref|ZP_07037821.1| TPR-domain containing protein [Bacteroides sp. 3_1_23]
 gi|298515244|gb|EFI39125.1| TPR-domain containing protein [Bacteroides sp. 3_1_23]
          Length = 1005

 Score = 39.7 bits (91), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 23/107 (21%)

Query: 162 MSRIVERYTNSPYVKGA-----RFYVTVGRNQLAA---KEV---------------EIGR 198
           ++R+V +Y  SPY   A     R YV +  N  A    KE+               EIG 
Sbjct: 606 LNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEIGL 665

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
            Y ++G+Y  AI  ++ V+  Y  +E A  AM  L   YV L  +DE
Sbjct: 666 LYYQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLKSIYVDLNRIDE 712


>gi|237717254|ref|ZP_04547735.1| TPR domain-containing protein [Bacteroides sp. D1]
 gi|262406021|ref|ZP_06082571.1| TPR domain-containing protein [Bacteroides sp. 2_1_22]
 gi|294806889|ref|ZP_06765714.1| tetratricopeptide repeat protein [Bacteroides xylanisolvens SD CC
           1b]
 gi|229443237|gb|EEO49028.1| TPR domain-containing protein [Bacteroides sp. D1]
 gi|262356896|gb|EEZ05986.1| TPR domain-containing protein [Bacteroides sp. 2_1_22]
 gi|294445918|gb|EFG14560.1| tetratricopeptide repeat protein [Bacteroides xylanisolvens SD CC
           1b]
          Length = 1005

 Score = 39.7 bits (91), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 23/107 (21%)

Query: 162 MSRIVERYTNSPYVKGA-----RFYVTVGRNQLAA---KEV---------------EIGR 198
           ++R+V +Y  SPY   A     R YV +  N  A    KE+               EIG 
Sbjct: 606 LNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEIGL 665

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
            Y ++G+Y  AI  ++ V+  Y  +E A  AM  L   YV L  +DE
Sbjct: 666 LYYQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLKSIYVDLNRIDE 712


>gi|295085535|emb|CBK67058.1| Uncharacterized protein conserved in bacteria [Bacteroides
           xylanisolvens XB1A]
          Length = 1005

 Score = 39.7 bits (91), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 23/107 (21%)

Query: 162 MSRIVERYTNSPYVKGA-----RFYVTVGRNQLAA---KEV---------------EIGR 198
           ++R+V +Y  SPY   A     R YV +  N  A    KE+               EIG 
Sbjct: 606 LNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEIGL 665

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
            Y ++G+Y  AI  ++ V+  Y  +E A  AM  L   YV L  +DE
Sbjct: 666 LYYQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLKSIYVDLNRIDE 712


>gi|293368722|ref|ZP_06615327.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CMC 3f]
 gi|292636187|gb|EFF54674.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CMC 3f]
          Length = 1005

 Score = 39.7 bits (91), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 23/107 (21%)

Query: 162 MSRIVERYTNSPYVKGA-----RFYVTVGRNQLAA---KEV---------------EIGR 198
           ++R+V +Y  SPY   A     R YV +  N  A    KE+               EIG 
Sbjct: 606 LNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEIGL 665

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
            Y ++G+Y  AI  ++ V+  Y  +E A  AM  L   YV L  +DE
Sbjct: 666 LYYQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLKSIYVDLNRIDE 712


>gi|253699141|ref|YP_003020330.1| outer membrane assembly lipoprotein YfiO [Geobacter sp. M21]
 gi|251773991|gb|ACT16572.1| outer membrane assembly lipoprotein YfiO [Geobacter sp. M21]
          Length = 256

 Score = 39.7 bits (91), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 30/148 (20%), Positives = 60/148 (40%)

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
           +P      Y  Y + +S+ Q I     DQ   K  +  +   + +Y  S Y       + 
Sbjct: 98  HPTHPQAPYALYRLALSHYQQIAGTDTDQTPVKNAVATLEAFLGQYPRSEYAPELSKKLA 157

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
             R++  A E  +G +YL+  +Y +AI R    L  +      ++ +  L +AY+    +
Sbjct: 158 DCRDKQLAYENYVGNFYLRSEKYQSAIKRLNEALVRFPGLTRLDDTLFYLGKAYLKAGEL 217

Query: 244 DEAREVVSLIQERYPQGYWARYVETLVK 271
            + + V+  +   +P     R    L++
Sbjct: 218 QQGKVVLQRLAAEHPASPRNREAAALLQ 245


>gi|78358000|ref|YP_389449.1| TPR repeat-containing protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78220405|gb|ABB39754.1| TPR repeat [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 1154

 Score = 39.7 bits (91), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 36/65 (55%)

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           G ++  +G+Y  A  +FQ V+ N+ D+    E+   L  A   L   D+A ++V  I++R
Sbjct: 622 GDHFFNKGQYQKAADQFQFVVQNHPDSRFVRESSVGLARALYRLGYYDQAYQIVDYIEKR 681

Query: 257 YPQGY 261
           +P+ Y
Sbjct: 682 WPRFY 686


>gi|298480096|ref|ZP_06998295.1| TPR-domain containing protein [Bacteroides sp. D22]
 gi|298273905|gb|EFI15467.1| TPR-domain containing protein [Bacteroides sp. D22]
          Length = 1005

 Score = 39.7 bits (91), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 23/107 (21%)

Query: 162 MSRIVERYTNSPYVKGA-----RFYVTVGRNQLAA---KEV---------------EIGR 198
           ++R+V +Y  SPY   A     R YV +  N  A    KE+               EIG 
Sbjct: 606 LNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEIGL 665

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
            Y ++G+Y  AI  ++ V+  Y  +E A  AM  L   YV L  +DE
Sbjct: 666 LYYQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLKSIYVDLNRIDE 712


>gi|237719009|ref|ZP_04549490.1| TPR-domain-containing protein [Bacteroides sp. 2_2_4]
 gi|229451787|gb|EEO57578.1| TPR-domain-containing protein [Bacteroides sp. 2_2_4]
          Length = 1005

 Score = 39.7 bits (91), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 23/107 (21%)

Query: 162 MSRIVERYTNSPYVKGA-----RFYVTVGRNQLAA---KEV---------------EIGR 198
           ++R+V +Y  SPY   A     R YV +  N  A    KE+               EIG 
Sbjct: 606 LNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEIGL 665

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
            Y ++G+Y  AI  ++ V+  Y  +E A  AM  L   YV L  +DE
Sbjct: 666 LYYQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLKSIYVDLNRIDE 712


>gi|82523862|emb|CAI78810.1| hypothetical protein [uncultured candidate division WS3 bacterium]
          Length = 310

 Score = 39.7 bits (91), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 54/134 (40%), Gaps = 22/134 (16%)

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           A++ +S GKYQ A     +Y+  YP ++  D   Y +G  Y        Y QR     ++
Sbjct: 195 AYLDFSKGKYQLAIQGFTDYLKNYPGTERADNAQYWIGECY--------YVQRDHDSAIE 246

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
              R++++Y +     GA                +IG   L       AI + + V+  Y
Sbjct: 247 AFQRVLDQYPDGNKAPGAML--------------KIGYALLSLDREREAIRQLKTVMERY 292

Query: 221 SDAEHAEEAMARLV 234
                AE A A+L+
Sbjct: 293 PQTSEAEHARAKLL 306



 Score = 36.6 bits (83), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%)

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           YY++R ++ +AI  FQ VL  Y D   A  AM ++  A ++L    EA   +  + ERYP
Sbjct: 235 YYVQR-DHDSAIEAFQRVLDQYPDGNKAPGAMLKIGYALLSLDREREAIRQLKTVMERYP 293

Query: 259 QGYWARYV 266
           Q   A + 
Sbjct: 294 QTSEAEHA 301


>gi|86144192|ref|ZP_01062528.1| lipoprotein protein, putative [Leeuwenhoekiella blandensis MED217]
 gi|85829322|gb|EAQ47788.1| lipoprotein protein, putative [Leeuwenhoekiella blandensis MED217]
          Length = 268

 Score = 39.7 bits (91), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 27/112 (24%), Positives = 50/112 (44%)

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           + +++ YP+S   +   Y   +SYA++  +   DQ  T+  L Y+ + +  Y  S Y   
Sbjct: 95  DRFVSAYPDSDKAEEAQYKAAVSYAELSPNYQLDQSETEKGLDYLQQFITAYPESEYAAD 154

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
           A   +     +L  K   + + + K  +Y  AI  F   L++Y  +   E A
Sbjct: 155 ASERIKELSIKLQKKSYMVAKGWHKIMDYPVAISAFDDFLSDYPGSPFREAA 206


>gi|313205262|ref|YP_004043919.1| hypothetical protein [Paludibacter propionicigenes WB4]
 gi|312444578|gb|ADQ80934.1| Tetratricopeptide TPR_1 repeat-containing protein [Paludibacter
           propionicigenes WB4]
          Length = 1010

 Score = 39.3 bits (90), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 80/202 (39%), Gaps = 32/202 (15%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           +N SKA  ++++     P    A  ++  SA+V      Y    +  E  ITQYP+S+  
Sbjct: 559 RNLSKAQLFYSKAVAASP--NTADYAMFQSAYVAGLQKNYSSKITKLESLITQYPKSEYT 616

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
           D   Y +G +Y               LM+    + +  Y         R       +++A
Sbjct: 617 DDAMYEMGRAY---------------LMMDNNEKAIATYQ--------RLLAAQPTSEMA 653

Query: 191 AK-EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
            K  +EIG  Y    +   AIP ++ V+A Y   + A  A+  L   Y+      EA +V
Sbjct: 654 RKAALEIGMVYYNEKQNDRAIPAYKNVIAKYPGTDEANTALESLQTLYI------EANDV 707

Query: 250 VSLIQERYPQGYWARYVETLVK 271
            S +      G+  + V   V+
Sbjct: 708 SSYLNYTKSLGHVVKSVNAAVE 729


>gi|197116873|ref|YP_002137300.1| outer membrane protein assembly lipoprotein YfiO [Geobacter
           bemidjiensis Bem]
 gi|197086233|gb|ACH37504.1| outer membrane protein assembly lipoprotein YfiO, putative
           [Geobacter bemidjiensis Bem]
          Length = 256

 Score = 39.3 bits (90), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 38/188 (20%), Positives = 80/188 (42%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           +N+++A E + +        G+  ++ L  A   +    Y +AA+  E++   +P     
Sbjct: 45  RNYAEAIESWKKVKESDTAPGLTSQAELKIADAHFENKAYIEAAAAYEDFRKLHPTHPQA 104

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
            Y  Y + +S+ Q I     DQ   K  +  +   + +Y  S Y       +   R++  
Sbjct: 105 PYALYRLALSHYQQITGTDTDQTPVKNAVATLEAFLGQYPRSEYAPELSGKLADCRDKQL 164

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
           A E  +G +YL+  +Y +AI R    L  +      ++ +  L +AY+    + + + V+
Sbjct: 165 AYENYVGNFYLRTEKYQSAIKRLNEALVRFPGLTRLDDTLFYLGKAYLKAGDVKQGKVVL 224

Query: 251 SLIQERYP 258
             +   +P
Sbjct: 225 QRLAAEHP 232


>gi|298372047|ref|ZP_06982037.1| TPR-domain containing protein [Bacteroidetes oral taxon 274 str.
           F0058]
 gi|298274951|gb|EFI16502.1| TPR-domain containing protein [Bacteroidetes oral taxon 274 str.
           F0058]
          Length = 999

 Score = 39.3 bits (90), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 14/97 (14%)

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
           + R++++Y NS Y   A++              EIGR Y+ + +Y  AI  +  VL NY 
Sbjct: 591 LQRLIKKYPNSVYAPKAQY--------------EIGRAYVLQNKYSKAIEEYNTVLTNYP 636

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
               A +A+      Y  +   D+A      + E+YP
Sbjct: 637 QTPIARKAILETGMLYENMGQTDKAIAAYKNVVEKYP 673


>gi|294645887|ref|ZP_06723563.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a]
 gi|292638767|gb|EFF57109.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a]
          Length = 601

 Score = 39.3 bits (90), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 23/107 (21%)

Query: 162 MSRIVERYTNSPYVKGA-----RFYVTVGRNQLAA---KEV---------------EIGR 198
           ++R+V +Y  SPY   A     R YV +  N  A    KE+               EIG 
Sbjct: 202 LNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEIGL 261

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
            Y ++G+Y  AI  ++ V+  Y  +E A  AM  L   YV L  +DE
Sbjct: 262 LYYQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLKSIYVDLNRIDE 308


>gi|294056473|ref|YP_003550131.1| Tetratricopeptide TPR_2 repeat protein [Coraliomargarita
           akajimensis DSM 45221]
 gi|293615806|gb|ADE55961.1| Tetratricopeptide TPR_2 repeat protein [Coraliomargarita
           akajimensis DSM 45221]
          Length = 342

 Score = 39.3 bits (90), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 38/171 (22%), Positives = 73/171 (42%), Gaps = 3/171 (1%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           + + ++ + F     + P++  +  +L+  A V       + A    +  I  YP+S   
Sbjct: 156 KQYGESIKQFEGVISNAPYSDYSPLALMDIALVAEKRNDDEVAIDALDRLINFYPQSMLA 215

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
              YY +  +Y  ++++  YDQ +T+  + Y    +  +  S  V      +    N LA
Sbjct: 216 PDAYYTLAKTYGGLVQNAEYDQGSTRQAISYYEDYLVLFPESQSVGEVEANLKKMENLLA 275

Query: 191 AKEVEIGR-YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL--VEAYV 238
           +  + +G  YY  R    AA+  +   +    D+E A EA  R+  +EA V
Sbjct: 276 SSRLLLGDFYYFHRSNNTAALVFYNETITIAPDSEAAAEAQNRINDIEAGV 326


>gi|110636602|ref|YP_676809.1| TPR repeat-containing gliding mobility protein [Cytophaga
           hutchinsonii ATCC 33406]
 gi|110279283|gb|ABG57469.1| gliding motility-related protein; TPR repeat-containing protein
           [Cytophaga hutchinsonii ATCC 33406]
          Length = 794

 Score = 39.3 bits (90), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 21/115 (18%)

Query: 149 PYDQRATKLMLQYMSRIVE-------RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
           P D   TK ++  +  I++       R+ NS YV  +  Y+ VGR ++            
Sbjct: 95  PLDTNKTKGLISQLDDIIKKASMPIRRHKNSDYVDDS--YILVGRCRI------------ 140

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            RGE+   I  ++ V A+  D +   E++  LV AY+A   +D A+ V+  + ++
Sbjct: 141 YRGEFKMGIETYKYVNAHGKDDDDKIESLVYLVRAYMAANQLDNAKTVLDHLDKQ 195


>gi|187735051|ref|YP_001877163.1| Tetratricopeptide TPR_2 repeat protein [Akkermansia muciniphila
           ATCC BAA-835]
 gi|187425103|gb|ACD04382.1| Tetratricopeptide TPR_2 repeat protein [Akkermansia muciniphila
           ATCC BAA-835]
          Length = 1077

 Score = 39.3 bits (90), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 42/193 (21%), Positives = 76/193 (39%), Gaps = 35/193 (18%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           AY+  N+    +P A     +L   A   +  G+  +   L  +++ ++P SK   Y   
Sbjct: 362 AYQLINES---YPDAPGREDNLYYLAMTTWQLGEADKGGELVAQHLKEFPNSK---YAPM 415

Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP---------YVKGARFYVTVGR 186
           L  +S   ++++  +D     L +Q   +++E + + P         Y KGA  +     
Sbjct: 416 LNTLSLEGLLKEKKFD-----LCVQQADKVMELHKDDPTHKFYELALYCKGASLF----- 465

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
             L A +            Y  A+P  +  +  Y D+ + + AM  L E Y  L   DEA
Sbjct: 466 -NLGAADA---------SRYKEAVPVLERFVKEYRDSTYLKTAMYLLGETYTNLGNTDEA 515

Query: 247 REVVSLIQERYPQ 259
               +    R+P 
Sbjct: 516 IRSFTNYIARFPD 528


>gi|283975459|gb|ADB55715.1| heat shock protein 90 [Pseudozyma flocculosa]
          Length = 617

 Score = 39.3 bits (90), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
           + NF+K YE F +  +         ++ L + F+++ + K     +  ++YIT+ P+   
Sbjct: 318 KDNFAKFYEAFGKNLKLGIHEDATNRNKL-AEFLRFHSTKSGDEMTSLKDYITRMPQDGK 376

Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
            + ++YL G S A  IRD P+ +R  K  L+ +
Sbjct: 377 NNSIFYLTGESLAS-IRDSPFLERLKKKGLEVL 408


>gi|254431650|ref|ZP_05045353.1| ribosomal protein S4 [Cyanobium sp. PCC 7001]
 gi|197626103|gb|EDY38662.1| ribosomal protein S4 [Cyanobium sp. PCC 7001]
          Length = 188

 Score = 38.9 bits (89), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 59/140 (42%), Gaps = 23/140 (16%)

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
           D P  G+ RKS   S    Y  G++ QA     EY  +  E + + + Y   G+S  Q++
Sbjct: 3   DLP--GLTRKSAKRS----YPPGQHGQARRKRSEYAIRLEEKQKLRFNY---GISERQLV 53

Query: 146 RDVPYDQRAT-----------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
           R   Y ++A            KL+   +  I  R    P V GAR  V  G   +  + V
Sbjct: 54  R---YVKKARAQGGSSGTNLLKLLENRLDNICFRLGFGPTVPGARQLVNHGHVTVNGRVV 110

Query: 195 EIGRYYLKRGEYVAAIPRFQ 214
           +I  Y  K G+ VA   R Q
Sbjct: 111 DIASYQCKPGDVVAIRERKQ 130


>gi|319411484|emb|CBQ73528.1| probable heat shock protein 80 [Sporisorium reilianum]
          Length = 705

 Score = 38.5 bits (88), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 2/93 (2%)

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
           + NF+K YE F +  +       A     ++ F+++ + K  +  +  ++YIT+ P+   
Sbjct: 405 KDNFAKFYEAFGKNLK-LGIHEDATNRAKLAEFLRFHSTKSGEEMTSLKDYITRMPQDGK 463

Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
            + ++YL G S    IRD P+ +R  K  L+ +
Sbjct: 464 NNQIFYLTGESLGS-IRDSPFLERLKKKGLEVL 495


>gi|149176357|ref|ZP_01854971.1| hypothetical protein PM8797T_07539 [Planctomyces maris DSM 8797]
 gi|148844709|gb|EDL59058.1| hypothetical protein PM8797T_07539 [Planctomyces maris DSM 8797]
          Length = 1027

 Score = 38.5 bits (88), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 48/219 (21%), Positives = 91/219 (41%), Gaps = 34/219 (15%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
           V+ D  +D       ++ A+   K+  +  A E F +  +D+P       +         
Sbjct: 34  VHADKASDE------FQLAIGLYKQNRWELATERFQKYLKDYPTDASVPLAKFYLGLTLV 87

Query: 106 SAGKYQQAASLGEEYITQYPESKNV-DYVYYLVGMSYAQMIRDVPYDQRA-TKLMLQYMS 163
           +  KYQ+A ++  E++ Q+P++ N+ D +Y +   SY  ++ D+   ++  T+ +  Y +
Sbjct: 88  NQQKYQEARTILREFVKQHPQNNNLPDALYRIAECSY--LLDDLDAAEKEFTEFLKLYPN 145

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
             +E +   PY                      G   L+RG+   AI  FQ  L  +   
Sbjct: 146 HALEEWA-YPY---------------------FGDVLLRRGKADLAIKSFQRSLERHPKG 183

Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLI--QERYPQG 260
             AE+A   L  +Y+     DEA +    I  Q+ + +G
Sbjct: 184 AMAEDAQFGLASSYLRNKQSDEAEKRFKAIAGQKNHSRG 222


>gi|256370729|ref|YP_003108554.1| hypothetical protein SMDSEM_178 [Candidatus Sulcia muelleri SMDSEM]
 gi|256009521|gb|ACU52881.1| hypothetical protein SMDSEM_178 [Candidatus Sulcia muelleri SMDSEM]
          Length = 643

 Score = 38.5 bits (88), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 21/84 (25%), Positives = 42/84 (50%)

Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
           +GM Y +   D  +DQ+     ++   + ++ Y NS  +  A+  +      L  K++ I
Sbjct: 468 LGMCYYKQANDYNFDQQNNLKSIKVFLKFIKSYPNSLKLNTAKKMLYKAVLNLKKKQISI 527

Query: 197 GRYYLKRGEYVAAIPRFQLVLANY 220
           G +Y KR +Y A++  F+  + N+
Sbjct: 528 GNFYFKRKKYKASLFIFKDNIENF 551


>gi|150007834|ref|YP_001302577.1| hypothetical protein BDI_1192 [Parabacteroides distasonis ATCC
           8503]
 gi|255013465|ref|ZP_05285591.1| hypothetical protein B2_06125 [Bacteroides sp. 2_1_7]
 gi|256840092|ref|ZP_05545601.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|262381665|ref|ZP_06074803.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|298376805|ref|ZP_06986760.1| lipoprotein [Bacteroides sp. 3_1_19]
 gi|301310138|ref|ZP_07216077.1| putative lipoprotein [Bacteroides sp. 20_3]
 gi|149936258|gb|ABR42955.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
           8503]
 gi|256739022|gb|EEU52347.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|262296842|gb|EEY84772.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|298266683|gb|EFI08341.1| lipoprotein [Bacteroides sp. 3_1_19]
 gi|300831712|gb|EFK62343.1| putative lipoprotein [Bacteroides sp. 20_3]
          Length = 269

 Score = 38.5 bits (88), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 90/222 (40%), Gaps = 17/222 (7%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A  +   + +SK+    ++    F     A +SL + A   Y    YQ A+   E Y
Sbjct: 34  YSYAKKYFNAKQYSKSATLLDELVTIFKGTAYAEESLYLLAQSYYGQKDYQTASQYFETY 93

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
            T YP+ +  +   +  G        D   DQ  T   ++ +   +E Y  S   + A+ 
Sbjct: 94  YTTYPKGEFTELSRFYSGYGLYLDSPDPRLDQSQTYKAIEQLQLYLEYYPQSERAEEAQN 153

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYV-----AAIPRFQLVLANYSDAEHAEEAMARLVE 235
            +   + +LA KE+   R Y   G Y+     + +   Q  L NY  +++ EE M  ++ 
Sbjct: 154 IMFELQEKLAYKELMATRLYFNLGTYMGNNFQSCVITAQNALKNYPYSKYREEFMFLIIR 213

Query: 236 AYVALALM-----------DEAREVVSLIQERYPQGYWARYV 266
           A   LAL+           D   E  + + E YP+G + + V
Sbjct: 214 AKYELALVSVEEKLQGRYRDVVDEYYNYMNE-YPEGNYVKQV 254


>gi|297569747|ref|YP_003691091.1| hypothetical protein DaAHT2_1781 [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296925662|gb|ADH86472.1| hypothetical protein DaAHT2_1781 [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 239

 Score = 38.5 bits (88), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 8/102 (7%)

Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
           VD   Y++G+ YA    D  +  R  +L  QY ++++  + NSP V  A   V +  + +
Sbjct: 58  VDLALYVLGLVYA----DPAFKDRNAQLSRQYFAQLIRHFPNSPLVPEANILVDL-YDAM 112

Query: 190 AAKEVEIGRYY--LKRG-EYVAAIPRFQLVLANYSDAEHAEE 228
           AA+++ I      LK   E  AA+PR  +   N+ +A    E
Sbjct: 113 AARDLAIATLSERLKTASEATAALPRPLVEDQNFEEAARKNE 154


>gi|157273540|gb|ABV27439.1| probable soluble lytic transglycosylase [Candidatus
           Chloracidobacterium thermophilum]
          Length = 801

 Score = 38.5 bits (88), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 17/62 (27%), Positives = 35/62 (56%)

Query: 67  FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
           F  E+N+ +A  +F++  R++P +    K    +     +AG+Y++A +  E +I  YP+
Sbjct: 300 FFIEENWDEAVRWFDRAHREYPTSPEGEKGYYQAGHALQNAGRYREAVARYEAFIAAYPD 359

Query: 127 SK 128
           S+
Sbjct: 360 SE 361


>gi|281358385|ref|ZP_06244867.1| DNA uptake lipoprotein-like protein [Victivallis vadensis ATCC
           BAA-548]
 gi|281315212|gb|EFA99243.1| DNA uptake lipoprotein-like protein [Victivallis vadensis ATCC
           BAA-548]
          Length = 359

 Score = 38.5 bits (88), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 35/162 (21%), Positives = 67/162 (41%)

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
            K+ E F +     PFA  A ++ L  A++    GK +++       I  +P++K   Y 
Sbjct: 135 DKSIEVFEKALDRAPFAESAPEARLRLAYLFDQKGKVKESLEQLRIIIRDFPDAKACRYA 194

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
           Y  +     ++ R    D    +   +     +E+Y ++P     +  +   R+  A + 
Sbjct: 195 YLALANGLYELSRRGDGDGAYNRESYELFKTFLEKYPDAPEAPWVKVRMVRSRDIQAGRL 254

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
            E+  YY + G   A+      VL +Y D   A+ +   LV+
Sbjct: 255 YELAEYYERAGRKEASERYLAQVLKDYPDTTSADASERLLVK 296


>gi|225013058|ref|ZP_03703473.1| DNA uptake lipoprotein-like protein [Flavobacteria bacterium
           MS024-2A]
 gi|225002786|gb|EEG40767.1| DNA uptake lipoprotein-like protein [Flavobacteria bacterium
           MS024-2A]
          Length = 275

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 39/184 (21%), Positives = 77/184 (41%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E Y++A ++     + KA   F Q    +     A++ +   A   +    Y  AA   E
Sbjct: 35  EKYKQAEVYYNSGEYRKANRLFEQIIPKYRGKAQAQRIIFFFADSYFQTKSYYLAAYQYE 94

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            +I  YP+S  +    +    SY         DQ  T   ++ +   +  Y NS ++  A
Sbjct: 95  NFIKSYPQSDRIQEATFKAAKSYYFSSPKFSLDQEDTYTAIEKLQVFINLYPNSEFIVEA 154

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
              ++  + +L  K+ EI + Y    +Y +AI   +  +A++   ++ E A+    +A  
Sbjct: 155 NQMISELQEKLEQKDFEIAKQYYTIRDYQSAIKSSENFIASFPGTKYRESALFNKFKASY 214

Query: 239 ALAL 242
            +A+
Sbjct: 215 EIAV 218


>gi|149917378|ref|ZP_01905876.1| putative competence lipoprotein ComL [Plesiocystis pacifica SIR-1]
 gi|149821715|gb|EDM81111.1| putative competence lipoprotein ComL [Plesiocystis pacifica SIR-1]
          Length = 394

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 72/174 (41%), Gaps = 10/174 (5%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           RE YE A      Q++  A  Y       FP++   R++ L+ A V Y   +Y  A    
Sbjct: 29  RENYELAQASFDNQDWEDAAAYARFVRERFPYSRYVREAKLLEARVLYELKEYPSAQDAF 88

Query: 118 EEYITQYPESKNV--DYVYYLVGMS-YAQMIRDVPY-------DQRATKLMLQYMSRIVE 167
             ++ ++P  ++V   +V Y+V +S Y      VP+       DQ   +  L  +    +
Sbjct: 89  RMFMAEHPTHEHVVNGWVPYMVAVSAYMASPSSVPFLPPHFQRDQELLRQTLMELEVFFD 148

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
           RY+ +     AR        +L   E+ + R++L R    AAI R       Y+
Sbjct: 149 RYSGTRMEPLARKLEAEVNRRLLEHELYVARFHLDRDRPEAAIMRLSSAHDRYA 202


>gi|153805821|ref|ZP_01958489.1| hypothetical protein BACCAC_00058 [Bacteroides caccae ATCC 43185]
 gi|149130498|gb|EDM21704.1| hypothetical protein BACCAC_00058 [Bacteroides caccae ATCC 43185]
          Length = 1005

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 23/107 (21%)

Query: 162 MSRIVERYTNSPYVKGA-----RFYVTVGRNQLAA---KEV---------------EIGR 198
           ++R+V +Y  SPY   A     R YV +  N  A    KE+               EIG 
Sbjct: 606 LNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLNKYPESPVSRKAAAEIGL 665

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
            + ++G+Y  AI  ++ V+  Y  +E A  AM  L   YV L  +DE
Sbjct: 666 LFYQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLKSIYVDLNRIDE 712


>gi|333029576|ref|ZP_08457637.1| Tetratricopeptide TPR_2 repeat-containing protein [Bacteroides
           coprosuis DSM 18011]
 gi|332740173|gb|EGJ70655.1| Tetratricopeptide TPR_2 repeat-containing protein [Bacteroides
           coprosuis DSM 18011]
          Length = 1006

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 62/156 (39%), Gaps = 22/156 (14%)

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           A V   S+   A V      Y +  +L      +YPES  V   +Y  G S+ Q      
Sbjct: 579 ASVGDYSIYQMALVAGLQKNYSEKINLLSRLANEYPESPYVAQGWYEKGRSFVQ------ 632

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
             Q+     ++   +++++Y  +P  + A                E+G  Y + G Y  A
Sbjct: 633 --QQNNSEAIRSFQQLIQKYPENPISRKA--------------AAEVGLLYYQDGNYNEA 676

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
           I  ++ V+  Y  ++ A  AM  L   YV L  +DE
Sbjct: 677 IKTYKWVVQKYPGSDEARMAMRDLKSLYVDLNRVDE 712



 Score = 35.4 bits (80), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 34/67 (50%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YEK   F+++QN S+A   F Q  + +P   ++RK+      + Y  G Y +A    +  
Sbjct: 624 YEKGRSFVQQQNNSEAIRSFQQLIQKYPENPISRKAAAEVGLLYYQDGNYNEAIKTYKWV 683

Query: 121 ITQYPES 127
           + +YP S
Sbjct: 684 VQKYPGS 690


>gi|317970558|ref|ZP_07971948.1| 30S ribosomal protein S4 [Synechococcus sp. CB0205]
          Length = 202

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 56/137 (40%), Gaps = 17/137 (12%)

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
           D P  G+ RKS   S    Y  G++ QA     EY  +  E + + + Y   G+S  Q++
Sbjct: 17  DLP--GLTRKSAKRS----YPPGQHGQARRKRSEYAIRLEEKQKLRFNY---GISERQLV 67

Query: 146 R--------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
           R        +        KL+   +  +  R    P V GAR  V  G   +  + V+I 
Sbjct: 68  RYVKKARAQEGSTGTNLLKLLENRLDNVCFRLGFGPTVPGARQLVNHGHVTVNGRVVDIA 127

Query: 198 RYYLKRGEYVAAIPRFQ 214
            Y  K G+ VA   R Q
Sbjct: 128 SYQCKAGDVVAIRERKQ 144


>gi|32491283|ref|NP_871537.1| hypothetical protein WGLp534 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166490|dbj|BAC24680.1| yfiO [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 226

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 29/133 (21%), Positives = 67/133 (50%), Gaps = 14/133 (10%)

Query: 112 QAASLGEEYITQYPESKN----VDYVYYLVGMSYAQMIRDVP----YDQR---ATK---L 157
           +  S+ EE I Q+ ES      +D++ Y+ G+    + ++      Y ++    TK   L
Sbjct: 89  ENNSILEEIIDQFIESNPRCPYIDFLIYIQGLINMDLDKNTINFFIYKKKFIENTKYAYL 148

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
            L    +++ +Y NS + K ++ Y+     ++A  E++I ++Y K+  Y A+  R   ++
Sbjct: 149 ALNNFKKLIYKYPNSDFYKSSKNYIFHLNERIAFHELQIIKFYFKKHAYSASNFRILEMI 208

Query: 218 ANYSDAEHAEEAM 230
             + + + ++E++
Sbjct: 209 NKFPNTKSSKESL 221


>gi|227536026|ref|ZP_03966075.1| conserved hypothetical lipoprotein [Sphingobacterium spiritivorum
           ATCC 33300]
 gi|227244139|gb|EEI94154.1| conserved hypothetical lipoprotein [Sphingobacterium spiritivorum
           ATCC 33300]
          Length = 304

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 37/171 (21%), Positives = 70/171 (40%), Gaps = 3/171 (1%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y++AV F +++ ++KA   F+   + +     A      +A+  Y    Y  A    +++
Sbjct: 40  YQEAVKFYEKKKYTKALALFDDLMQRYRGQAEAEDLYYYTAYTNYRLKDYTSARYHFKQF 99

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
              +P S   +   ++    +         DQ  T+  +  +   V  Y  S   K A  
Sbjct: 100 AQTFPNSAKAEECRFMTAYCFYLDSPRSSLDQENTRKAIDELQLFVNLYPESEKAKEASD 159

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRG---EYVAAIPRFQLVLANYSDAEHAEE 228
            +   R++L  K     + Y   G   +Y AA+   + VL +Y D ++AEE
Sbjct: 160 LIQQLRDKLEKKAFSNAKLYYDMGLNDDYKAAVIALENVLKDYPDTKYAEE 210


>gi|319943000|ref|ZP_08017283.1| hypothetical protein HMPREF0551_0129 [Lautropia mirabilis ATCC
           51599]
 gi|319743542|gb|EFV95946.1| hypothetical protein HMPREF0551_0129 [Lautropia mirabilis ATCC
           51599]
          Length = 273

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 27/123 (21%), Positives = 51/123 (41%), Gaps = 8/123 (6%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           ++  +E A+   ++ NF  A + F + ++ +P +     +L      QY+ G Y  A + 
Sbjct: 153 EKNEFEAALALFRKSNFKAADQAFAKFAKTYPESPYLPTALYWQGGAQYAQGNYNGAVNT 212

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            +  I ++P+S        L+G +      D        K   Q   RI + + N+P   
Sbjct: 213 LQSLIQRFPDSARKADALLLIGNAQVDAGND--------KAARQTFIRIGKEHPNTPAAN 264

Query: 177 GAR 179
            AR
Sbjct: 265 AAR 267


>gi|15639360|ref|NP_218809.1| hypothetical protein TP0369 [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189025602|ref|YP_001933374.1| hypothetical protein TPASS_0369 [Treponema pallidum subsp. pallidum
           SS14]
 gi|14285869|sp|O83384|Y369_TREPA RecName: Full=Uncharacterized protein TP_0369; Flags: Precursor
 gi|3322653|gb|AAC65360.1| predicted coding region TP0369 [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189018177|gb|ACD70795.1| hypothetical protein TPASS_0369 [Treponema pallidum subsp. pallidum
           SS14]
          Length = 516

 Score = 37.7 bits (86), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 6/65 (9%)

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
           ASLG+ +  Q+P  + +D  ++L G +Y     ++   QR  +L L+    I+ER+ +SP
Sbjct: 443 ASLGD-FFAQFPSHERMDEAWFLRGQAY-----EINGAQRNVRLALEAYKTILERFPHSP 496

Query: 174 YVKGA 178
           Y K A
Sbjct: 497 YWKKA 501


>gi|298388044|ref|ZP_06997591.1| outer membrane protein [Bacteroides sp. 1_1_14]
 gi|298259224|gb|EFI02101.1| outer membrane protein [Bacteroides sp. 1_1_14]
          Length = 645

 Score = 37.7 bits (86), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 10/73 (13%)

Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDV-RYQREVYEKAVL-------FLKEQNFSK 75
          +T FF +A C LV +   +  D YLD   DV   Q +VY  +         F  +  +S 
Sbjct: 6  ITKFFLVAACGLVTF--AACSDEYLDKKVDVSETQEKVYSDSAKVAGVVNGFYGQIGYSH 63

Query: 76 AYEYFNQCSRDFP 88
          +Y+ F QC  DFP
Sbjct: 64 SYKRFGQCGLDFP 76


>gi|237714494|ref|ZP_04544975.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262406359|ref|ZP_06082908.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294643239|ref|ZP_06721065.1| outer membrane assembly lipoprotein YfiO [Bacteroides ovatus SD CC
           2a]
 gi|294806432|ref|ZP_06765273.1| outer membrane assembly lipoprotein YfiO [Bacteroides xylanisolvens
           SD CC 1b]
 gi|298482860|ref|ZP_07001043.1| hypothetical protein HMPREF0106_03328 [Bacteroides sp. D22]
 gi|229445263|gb|EEO51054.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262355062|gb|EEZ04153.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292641362|gb|EFF59554.1| outer membrane assembly lipoprotein YfiO [Bacteroides ovatus SD CC
           2a]
 gi|294446295|gb|EFG14921.1| outer membrane assembly lipoprotein YfiO [Bacteroides xylanisolvens
           SD CC 1b]
 gi|295083909|emb|CBK65432.1| outer membrane assembly lipoprotein YfiO [Bacteroides xylanisolvens
           XB1A]
 gi|298271060|gb|EFI12638.1| hypothetical protein HMPREF0106_03328 [Bacteroides sp. D22]
          Length = 267

 Score = 37.4 bits (85), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 51/236 (21%), Positives = 93/236 (39%), Gaps = 24/236 (10%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           TD  Y+   YE A  +  +  ++++    N+          A +SL M     Y+   YQ
Sbjct: 28  TDYEYK---YEAAKNYFAKGQYNRSATLLNELITILKGTDKAEESLYMLGMSYYNQKDYQ 84

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP---YDQRATKLMLQYMSRIVER 168
            AA     Y   YP     +   +  G +   +  D P    DQ +T   +Q +   +E 
Sbjct: 85  TAAQTFITYFNTYPRGTFTELARFHAGKA---LFLDTPEPRLDQSSTYQAIQQLQMFMEY 141

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV-----AAIPRFQLVLANYSDA 223
           + NS   + A+  +   +++L  KE+   R Y   G Y+     + +   Q  L +Y   
Sbjct: 142 FPNSTKKQEAQDMIFALQDKLVLKELYSARLYYNLGNYLGNNYESCVITAQNALKDYPYT 201

Query: 224 EHAEEAMARLVEAYVALAL-------MDEAREVVS---LIQERYPQGYWARYVETL 269
           ++ EE    ++ A   +A+       MD  RE V      +  +P+  + +  E +
Sbjct: 202 DYREELSILILRARHEMAIYSVEDKKMDRYRETVDEYYAFKNEFPESKYLKEAEKI 257


>gi|262199189|ref|YP_003270398.1| hypothetical protein Hoch_6030 [Haliangium ochraceum DSM 14365]
 gi|262082536|gb|ACY18505.1| hypothetical protein Hoch_6030 [Haliangium ochraceum DSM 14365]
          Length = 308

 Score = 37.4 bits (85), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 6/52 (11%)

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR---DVPYDQ 152
           Q+  GKY+QAA L E+ +T+ P   ++D  +Y   ++Y +M R   D P +Q
Sbjct: 24  QFEKGKYEQAAQLFEDALTKAP---HLDTAHYNAALTYKKMFRAGIDTPENQ 72


>gi|254416392|ref|ZP_05030145.1| ribosomal protein S4 [Microcoleus chthonoplastes PCC 7420]
 gi|196176830|gb|EDX71841.1| ribosomal protein S4 [Microcoleus chthonoplastes PCC 7420]
          Length = 202

 Score = 37.4 bits (85), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 17/130 (13%)

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
           D P  G+ RKS   S    Y  G++ QA     EY  +  E + + Y Y   G++  Q++
Sbjct: 17  DLP--GLTRKSPRRS----YPPGQHGQARRKRSEYAIRLEEKQKLRYNY---GVTEKQLL 67

Query: 146 RDVPYDQRATKLMLQYMSRIVE-RYTNSPY-------VKGARFYVTVGRNQLAAKEVEIG 197
           R V   +RAT    Q +  ++E R  N+ +       + GAR  V  G   +  +EV I 
Sbjct: 68  RYVRKARRATGSTGQALLELLEMRLDNTVFRLGMAGTIPGARQLVNHGHVMVNGREVNIA 127

Query: 198 RYYLKRGEYV 207
            Y  + G+ +
Sbjct: 128 SYQCRPGDVI 137


>gi|94264087|ref|ZP_01287886.1| Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1]
 gi|93455503|gb|EAT05693.1| Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1]
          Length = 703

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 62/129 (48%), Gaps = 14/129 (10%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV--QYSAGK----YQQ 112
           E++E+A   ++      A   + Q  R F  + +A+++L  +A +  Q +A +    +Q+
Sbjct: 56  ELWERAAAAIEADEPLTAARNYEQIHRQFGQSELAQEALWQAAELRRQLAAKEEDPDWQR 115

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
             +L   Y  +YP+S   +  Y  +G+++ QM        R  +  L Y     +RY +S
Sbjct: 116 VRNLYRRYTVEYPDSHRREQAYLELGLAHFQM--------RFLREALTYFRLFEQRYPDS 167

Query: 173 PYVKGARFY 181
           P +  AR++
Sbjct: 168 PLLPRARYW 176


>gi|254495492|ref|ZP_05108416.1| conserved hypothetical protein [Polaribacter sp. MED152]
 gi|85819847|gb|EAQ41004.1| conserved hypothetical protein [Polaribacter sp. MED152]
          Length = 289

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 70/177 (39%), Gaps = 5/177 (2%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E Y+ AV   + + FSKA   F + +  +       +   M A   ++   Y  A    +
Sbjct: 34  EKYKMAVKMYETKKFSKALRLFEKVTPAYRGKPQMERIQFMVAQSNFNVKNYTTAGYYFD 93

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            +   YP S   +   +L   SY         D   T+  L+     +  Y +S  ++ A
Sbjct: 94  RFTKNYPSSSKNEEAAFLSAYSYKLASPVSSKDPTDTRKALESFQMFINNYPDSDKIEEA 153

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEY-----VAAIPRFQLVLANYSDAEHAEEAM 230
             +    R +L  K  +I + Y    +Y      AAI  F  +LA+Y  +E  EEA+
Sbjct: 154 NQHYKELRYKLQKKYFDIAKVYYTTADYDMRNYKAAIQAFDNLLADYLGSEFKEEAL 210


>gi|313157575|gb|EFR56991.1| outer membrane assembly lipoprotein YfiO [Alistipes sp. HGB5]
          Length = 273

 Score = 37.4 bits (85), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 39/179 (21%), Positives = 79/179 (44%), Gaps = 4/179 (2%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLG 117
           +Y KA+ + +++ +S+A   F        ++G  R+  +   +A  +Y    Y  AA+L 
Sbjct: 36  IYSKALEYYQKEKWSRASTLFEGVQH--YYSGTPREDSISFFNARCKYKNRDYDTAATLL 93

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           +++  ++  S  ++    +  + +  +      DQ  T   L  ++  + RY +S  ++ 
Sbjct: 94  DDFRRKFGRSAFIEDAEGMYALCFYYLSPGPSRDQTMTGQALIAINEFMSRYPHSEQIEN 153

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
            +   T    +L  K       Y K G Y +AI   +  L  Y ++ H EE M  +V+A
Sbjct: 154 FKTINTELTQRLHDKAYLNAYTYYKIGRYKSAIVSLKNALKQYPESSHREEIMYLIVDA 212


>gi|318040406|ref|ZP_07972362.1| 30S ribosomal protein S4 [Synechococcus sp. CB0101]
          Length = 202

 Score = 37.4 bits (85), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 59/140 (42%), Gaps = 23/140 (16%)

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
           D P  G+ RKS   S    Y  G++ QA     EY  +  E + + + Y   G+S  Q++
Sbjct: 17  DLP--GLTRKSAKRS----YPPGQHGQARRKRSEYAIRLEEKQKLRFNY---GISERQLV 67

Query: 146 RDVPYDQRAT-----------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
           R   Y ++A            KL+   +  +  R    P V GAR  V  G   +  + V
Sbjct: 68  R---YVKKARAQEGSTGTNLLKLLENRLDNVCFRLGFGPTVPGARQLVNHGHVTVNGRVV 124

Query: 195 EIGRYYLKRGEYVAAIPRFQ 214
           +I  Y  K G+ VA   R Q
Sbjct: 125 DIPSYQCKAGDVVAIRERKQ 144


>gi|297530018|ref|YP_003671293.1| hypothetical protein GC56T3_1717 [Geobacillus sp. C56-T3]
 gi|297253270|gb|ADI26716.1| TPR repeat-containing protein [Geobacillus sp. C56-T3]
          Length = 1385

 Score = 37.4 bits (85), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 3/69 (4%)

Query: 63   KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
            +AV++L+E    KA     +   + P   +AR++L++        G+YQ+AA+L E Y  
Sbjct: 1239 QAVVWLQEGQHEKAERQLEEIVAEDP---LAREALMLLGEQYMETGRYQEAAALWERYAD 1295

Query: 123  QYPESKNVD 131
             YPE + ++
Sbjct: 1296 WYPEDEELN 1304


>gi|218961136|ref|YP_001740911.1| hypothetical protein CLOAM0824 [Candidatus Cloacamonas
           acidaminovorans]
 gi|167729793|emb|CAO80705.1| hypothetical protein CLOAM0824 [Candidatus Cloacamonas
           acidaminovorans]
          Length = 291

 Score = 37.4 bits (85), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 11/137 (8%)

Query: 67  FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
           +++ QN+ +AYE        F   G  R+ LL+SA V    G + ++     EY     E
Sbjct: 148 YVRIQNYDRAYEIILTAENKF---GKHRQLLLLSALVYGKKGIWLKSYHCFAEY-ESLGE 203

Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
             N D++     M+YA    ++  + RA +L+ +  ++ +  Y N+ Y +  R Y+    
Sbjct: 204 ITNPDHL-----MAYANAAVNIGMNDRAIELLQR--AQEINPYINAVYEELIRLYLKKND 256

Query: 187 NQLAAKEVEIGRYYLKR 203
            + A K ++I + Y+ R
Sbjct: 257 YKNAKKVLDIAKRYISR 273


>gi|320160833|ref|YP_004174057.1| hypothetical protein ANT_14290 [Anaerolinea thermophila UNI-1]
 gi|319994686|dbj|BAJ63457.1| hypothetical protein ANT_14290 [Anaerolinea thermophila UNI-1]
          Length = 839

 Score = 37.4 bits (85), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 28/132 (21%), Positives = 62/132 (46%), Gaps = 21/132 (15%)

Query: 47  YLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
           Y++   D+    ++ +E   +F +    +KA E + +C   FP A ++R++L ++    Y
Sbjct: 424 YVNKAGDIEDAPQILFEAGRIFERGNYLTKAVETWQECHEKFPAAEISRRALFLAGITLY 483

Query: 106 SAGKYQQAASLGEEY--ITQYPESKNVDYVYYLVGMSY-------------AQMIRDVP- 149
               + Q+  + + +  ++  PE +   Y++  VG +Y              Q ++  P 
Sbjct: 484 RLNDFSQSRLIFQRFLILSDNPEDQAAAYLW--VGKTYQAENNLQQAKIAWEQAVQRDPT 541

Query: 150 --YDQRATKLML 159
             Y QRA++L++
Sbjct: 542 GYYSQRASELLV 553


>gi|29345983|ref|NP_809486.1| hypothetical protein BT_0573 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|253568616|ref|ZP_04846027.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|298387378|ref|ZP_06996931.1| hypothetical protein HMPREF9007_04151 [Bacteroides sp. 1_1_14]
 gi|29337877|gb|AAO75680.1| lipoprotein protein, putative [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|251842689|gb|EES70769.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|298260047|gb|EFI02918.1| hypothetical protein HMPREF9007_04151 [Bacteroides sp. 1_1_14]
          Length = 267

 Score = 37.4 bits (85), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 50/236 (21%), Positives = 93/236 (39%), Gaps = 24/236 (10%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           TD  Y+   YE A  +  +  ++++    N+          A +SL M     Y+   YQ
Sbjct: 28  TDYEYK---YEAAKNYFAKGQYNRSATLLNELITILKGTDKAEESLYMLGMSYYNQKDYQ 84

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP---YDQRATKLMLQYMSRIVER 168
            AA     Y   YP     +   +  G S   +  D P    DQ +T   +Q +   +E 
Sbjct: 85  TAAQTFITYFNTYPRGTFTELARFHAGKS---LFLDTPEPRLDQSSTYQAIQQLQMFMEY 141

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV-----AAIPRFQLVLANYSDA 223
           + NS   + A+  +   +++L  KE+   + Y   G Y+     + +   Q  L +Y   
Sbjct: 142 FPNSTKKQEAQDMIFALQDKLVLKELYSAKLYYNLGNYLGNNYESCVITAQNALKDYPYT 201

Query: 224 EHAEEAMARLVEAYVALAL-------MDEAREVVS---LIQERYPQGYWARYVETL 269
           ++ EE    ++ A   +A+       MD  RE +      +  +P+  + +  E +
Sbjct: 202 DYREELSILILRARHEMAIYSVEDKKMDRYRETIDEYYAFKNEFPESKYLKEAEKI 257


>gi|313206826|ref|YP_004046003.1| outer membrane assembly lipoprotein yfio [Riemerella anatipestifer
           DSM 15868]
 gi|312446142|gb|ADQ82497.1| outer membrane assembly lipoprotein YfiO [Riemerella anatipestifer
           DSM 15868]
 gi|325335735|gb|ADZ12009.1| YfiO [Riemerella anatipestifer RA-GD]
          Length = 294

 Score = 37.4 bits (85), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 60/147 (40%), Gaps = 10/147 (6%)

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
           Y+  + Y Q   D   DQ+ T+L +  +   +  Y NS   K     +     +L  K  
Sbjct: 110 YMSAICYYQGSMDYNLDQKDTELAINELQSFLNNYPNSERAKNINELIDELSYKLEFKAY 169

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL----------MD 244
           E  R Y K  E  +AI  F+ VL ++   +   +    L++A   LA+          ++
Sbjct: 170 ENARQYYKMLELKSAIISFENVLDDFPSTKLRPKIETMLMDAKAKLAIDSKFELKRERLE 229

Query: 245 EAREVVSLIQERYPQGYWARYVETLVK 271
            A     L+++ YP    A+   TL K
Sbjct: 230 HAVAYTHLMEKNYPDTDIAKTAVTLRK 256


>gi|94987535|ref|YP_595468.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)proteins [Lawsonia intracellularis PHE/MN1-00]
 gi|94731784|emb|CAJ55147.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)proteins [Lawsonia intracellularis PHE/MN1-00]
          Length = 1076

 Score = 37.4 bits (85), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 34/66 (51%)

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           +G+    +GEY  A+  FQL+L NY +++  ++A   + EA         A  +V  +  
Sbjct: 546 LGKDQFSKGEYADAVKTFQLILDNYPESKAVQDASRFMAEALFKQGHYSRALILVDFVDR 605

Query: 256 RYPQGY 261
           R+P+ Y
Sbjct: 606 RWPRLY 611



 Score = 36.2 bits (82), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 27/182 (14%)

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
           P A  +  +L       +  G  Q    + EE + ++P+S +      L+ +   Q+I++
Sbjct: 646 PEAKDSHDTLFKIGTSYFKKGLMQGGKDVFEELLKKFPKSDSAPKA--LLALGEEQVIKE 703

Query: 148 VP--------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
            P        ++  ++ +   Y  +I++ Y NSP  + A         +LAA       +
Sbjct: 704 NPTIQELVTIFENPSSTIPEIYYKKILDEYPNSPEAQQAAI-------RLAA-------W 749

Query: 200 YLKRGEYVAAIPRFQLVLANYSD---AEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            L   +   A+   Q  L  Y +   A  AEE +AR  +   ALAL +E  E +  + E+
Sbjct: 750 KLWHRDIPTAMTMAQQFLDKYPESPYAPRAEEIIARGFDQSFALALQEENYERILSLWEK 809

Query: 257 YP 258
           YP
Sbjct: 810 YP 811


>gi|213961696|ref|ZP_03389962.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga sputigena
           Capno]
 gi|213955485|gb|EEB66801.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga sputigena
           Capno]
          Length = 268

 Score = 37.0 bits (84), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 61/157 (38%), Gaps = 10/157 (6%)

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
           YP S+      +L   S          DQ  T   L+ +   ++RY NS Y K A     
Sbjct: 98  YPRSEKATEASFLEAKSLYLETPKYSVDQTYTYQALEKLQYFLDRYPNSEYTKEANELTL 157

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM-ARLVEAY----- 237
               +L  K+ EI + Y K  +Y AA+      L N   +   EEA+  RL  AY     
Sbjct: 158 DLVTRLEKKDFEIAKQYDKIRDYQAAMKSLDNFLTNNPGSPFREEALYTRLHSAYEWAIN 217

Query: 238 ----VALALMDEAREVVSLIQERYPQGYWARYVETLV 270
                    ++ A+E    +   YP+  + +  E ++
Sbjct: 218 SVESKKEERLNTAKEAYDNLLRAYPESKFKKEAENML 254


>gi|332711735|ref|ZP_08431666.1| hypothetical protein LYNGBM3L_67340 [Lyngbya majuscula 3L]
 gi|332349713|gb|EGJ29322.1| hypothetical protein LYNGBM3L_67340 [Lyngbya majuscula 3L]
          Length = 823

 Score = 37.0 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 21/157 (13%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKN-VDYVYYLVGMSYA-QMIRDVPYDQRATKLMLQYM 162
           Y  G+YQ+A  L E+ I+ Y +S + +  +  LV ++   Q + D+  DQ       Q +
Sbjct: 21  YETGQYQEAIPLLEQLISNYTDSGDLIGEINSLVNLALVYQTLGDL--DQAK-----QTL 73

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANYS 221
           S+   + +  P  K ++        QL A+ +E+ G+ YL  G+   A+  +Q   A Y 
Sbjct: 74  SQSFTKLSQLPNTKESQ--------QLRAQTLEVQGQIYLSLGQGSKALSTWQETSAIYQ 125

Query: 222 DA---EHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           D        E+    V+A   L L  +A + ++ IQE
Sbjct: 126 DIGDLTRLTESQIYQVQALRVLGLYHQATKTLTQIQE 162


>gi|188995218|ref|YP_001929470.1| hypothetical protein PGN_1354 [Porphyromonas gingivalis ATCC 33277]
 gi|188594898|dbj|BAG33873.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC
           33277]
          Length = 310

 Score = 37.0 bits (84), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 5/124 (4%)

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           +EY  +YP+    +   Y  G  + +   D   DQ  T L +Q +   ++ + N  Y K 
Sbjct: 132 QEYYNKYPKGLRAEEARYKAGYCFYEASPDSRLDQSDTYLAIQELQSYLDFFPNGKYAKE 191

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV-----LANYSDAEHAEEAMAR 232
           A   +   +++LA KE    + Y   G Y+    R  +V     L  Y   +H EE +  
Sbjct: 192 AENMLFGLQDKLAYKEYRTAKLYYNLGLYLGNNYRSCIVTAEAALKTYPYTKHREELVFL 251

Query: 233 LVEA 236
           +++A
Sbjct: 252 MLQA 255


>gi|304312646|ref|YP_003812244.1| hypothetical protein HDN1F_30200 [gamma proteobacterium HdN1]
 gi|301798379|emb|CBL46603.1| Hypothetical protein HDN1F_30200 [gamma proteobacterium HdN1]
          Length = 1047

 Score = 37.0 bits (84), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 64/151 (42%), Gaps = 34/151 (22%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA-TKLMLQYMSR 164
           S   Y +A  L E+ I   PE  ++   +YL+  +         YD  A  +  L  +  
Sbjct: 149 SGANYARAIQLYEDQIRNAPEGTDLSDTWYLLAKA---------YDLNAEPEKALAALDT 199

Query: 165 IVERYTNSPYVKGARF-----YVTVGRNQ--LAA-----KEVEIGRYYL----------- 201
           + ERY NSP +   +F     Y  +G N   LAA     K    G+YY            
Sbjct: 200 MAERYPNSPLMDEVQFRRGEQYFVMGNNDKALAAYKQVLKAGPEGKYYENALYKYGWSLY 259

Query: 202 KRGEYVAAIPRFQLVLANY-SDAEHAEEAMA 231
           ++GEY AA+  F  +L  Y  +AE  E+ MA
Sbjct: 260 RQGEYEAALTPFITLLDRYLPNAETVEQQMA 290


>gi|332884569|gb|EGK04827.1| hypothetical protein HMPREF9456_03297 [Dysgonomonas mossii DSM
           22836]
          Length = 998

 Score = 37.0 bits (84), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 3/45 (6%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
           L+ S F+Q   G      S G+++I+ YP SKN+  VY L+G SY
Sbjct: 213 LIQSEFLQ---GNMNGTISEGQDFISSYPGSKNIAEVYRLLGSSY 254


>gi|71909660|ref|YP_287247.1| hypothetical protein Daro_4051 [Dechloromonas aromatica RCB]
 gi|71849281|gb|AAZ48777.1| conserved hypothetical protein [Dechloromonas aromatica RCB]
          Length = 243

 Score = 37.0 bits (84), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 54/134 (40%), Gaps = 22/134 (16%)

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
           +A  Q+ AGKY++AA     ++ +YP+S       Y +G ++        Y QR  K  +
Sbjct: 129 AALNQFKAGKYKEAAVGFGAFVQKYPDSSLAPNAQYWLGNAW--------YAQRDCKRAI 180

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
           +  S +  +Y  S     A   ++  + ++              G    A    + V+A 
Sbjct: 181 EAQSLVTTKYAESAKAPDAWLAISTCQQEM--------------GNPTGAKRSLETVIAK 226

Query: 220 YSDAEHAEEAMARL 233
           Y  A  A+ A  RL
Sbjct: 227 YPSAPAADTARERL 240


>gi|154492873|ref|ZP_02032499.1| hypothetical protein PARMER_02512 [Parabacteroides merdae ATCC
           43184]
 gi|154087178|gb|EDN86223.1| hypothetical protein PARMER_02512 [Parabacteroides merdae ATCC
           43184]
          Length = 269

 Score = 37.0 bits (84), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 55/222 (24%), Positives = 86/222 (38%), Gaps = 15/222 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A  +   + +SK+    ++    F     A +SL + A   Y    YQ A+     Y
Sbjct: 34  YSYAKKYFNAKQYSKSATLLDELVPIFKGTANAEESLYLLAQSYYGQKDYQTASQYFNTY 93

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
            T YP+ +  +   Y  G        D   DQ  T   +  +   +E Y  S   K A+ 
Sbjct: 94  YTTYPKGEFTELARYYSGYGLYLDSPDPRLDQAQTYEAINQLQLYLEYYPQSERAKEAQN 153

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRG-----EYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
            +   + +LA KE+   R Y   G      Y++ +   Q  L NY  +++ EE M   + 
Sbjct: 154 IMFELQEKLAYKELLAVRLYFNLGTYMGNNYLSCVITAQNALKNYPYSKYREEFMFYTIR 213

Query: 236 AYVALA-------LMDEAREVVS---LIQERYPQGYWARYVE 267
           A   LA       L    REVV         YP+G + + V+
Sbjct: 214 AKYELAVVSVEEKLQGRYREVVDEYYNYMNEYPEGKYVKQVQ 255


>gi|94967104|ref|YP_589152.1| DNA uptake lipoprotein-like [Candidatus Koribacter versatilis
           Ellin345]
 gi|94549154|gb|ABF39078.1| DNA uptake lipoprotein-like protein [Candidatus Koribacter
           versatilis Ellin345]
          Length = 497

 Score = 37.0 bits (84), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 58/109 (53%), Gaps = 7/109 (6%)

Query: 136 LVGMSYAQM---IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
           + G+ Y +M    RD  + +RA +   +Y   I++ + +SP V  A+  +   +  LA +
Sbjct: 124 IAGIHYDEMEKPDRDYTHAKRAEE---EYRQMILQ-FPDSPLVPKAKTRLLQVQEILAQR 179

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
           E  IG++Y+ R +Y AA+ R Q +   Y     ++EA+  L EA+ A A
Sbjct: 180 EFLIGKFYIMREDYPAAVARLQTLSDTYPLFSGSDEALFLLGEAHQAEA 228


>gi|255534236|ref|YP_003094607.1| lipoprotein protein, putative [Flavobacteriaceae bacterium 3519-10]
 gi|255340432|gb|ACU06545.1| lipoprotein protein, putative [Flavobacteriaceae bacterium 3519-10]
          Length = 324

 Score = 37.0 bits (84), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 28/118 (23%), Positives = 48/118 (40%)

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
           SA+  Y    Y+ A    + +   +P+    +   Y+  + + +   D   DQ +T+L +
Sbjct: 73  SAYANYYDKNYKLAGHQFKNFSVTFPQDPRAEDAAYMSALCFYEGSMDYNLDQTSTELAI 132

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
             +   +  Y NS   K     +     +L  K  E  R Y K  +Y AA   F+ VL
Sbjct: 133 NELQNFLNNYPNSEKSKNINELIDELTYKLEFKAYENARQYFKMADYKAANVAFENVL 190


>gi|149923399|ref|ZP_01911805.1| peptidase S8 and S53, subtilisin, kexin, sedolisin [Plesiocystis
           pacifica SIR-1]
 gi|149815757|gb|EDM75282.1| peptidase S8 and S53, subtilisin, kexin, sedolisin [Plesiocystis
           pacifica SIR-1]
          Length = 618

 Score = 36.6 bits (83), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 32/50 (64%)

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           +EY+   P + ++  +YY  G + A+MIRDVP  + A +LML+ ++ + +
Sbjct: 530 DEYMVGQPIAHDMVRMYYAYGPTLAKMIRDVPPARAAVRLMLRPVANVAK 579


>gi|315023899|gb|EFT36901.1| lipoprotein protein, putative [Riemerella anatipestifer RA-YM]
          Length = 270

 Score = 36.6 bits (83), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 60/147 (40%), Gaps = 10/147 (6%)

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
           Y+  + Y Q   D   DQ+ T+L +  +   +  Y NS   K     +     +L  K  
Sbjct: 86  YMSAICYYQGSMDYNLDQKDTELAINELQSFLNNYPNSERAKNINELIDELSYKLEFKAY 145

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL----------MD 244
           E  R Y K  E  +AI  F+ VL ++   +   +    L++A   LA+          ++
Sbjct: 146 ENARQYYKMLELKSAIISFENVLDDFPSTKLRPKIETMLMDAKAKLAIDSKFELKRERLE 205

Query: 245 EAREVVSLIQERYPQGYWARYVETLVK 271
            A     L+++ YP    A+   TL K
Sbjct: 206 HAVAYTHLMEKNYPDTDIAKTAVTLRK 232


>gi|34540927|ref|NP_905406.1| lipoprotein protein [Porphyromonas gingivalis W83]
 gi|34397242|gb|AAQ66305.1| lipoprotein protein, putative [Porphyromonas gingivalis W83]
          Length = 270

 Score = 36.6 bits (83), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 5/124 (4%)

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           +EY  +YP+    +   Y  G  + +   D   DQ  T L +Q +   ++ + N  Y K 
Sbjct: 92  QEYYNKYPKGLRAEEARYKAGYCFYEASPDSRLDQSDTYLAIQELQSYLDFFPNGKYAKE 151

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV-----LANYSDAEHAEEAMAR 232
           A   +   +++LA KE    + Y   G Y+    R  +V     L  Y   +H EE +  
Sbjct: 152 AENMLFGLQDKLAYKEYRTAKLYYNLGLYLGNNYRSCIVTAEAALKTYPYTKHREELVFL 211

Query: 233 LVEA 236
           +++A
Sbjct: 212 MLQA 215


>gi|262193342|ref|YP_003264551.1| hypothetical protein Hoch_0016 [Haliangium ochraceum DSM 14365]
 gi|262076689|gb|ACY12658.1| conserved hypothetical protein [Haliangium ochraceum DSM 14365]
          Length = 293

 Score = 36.6 bits (83), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 34/63 (53%)

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           G  Y +  +Y AAI  FQ V   Y D+  A++A+ R  EA   L    EAR    +++++
Sbjct: 205 GEAYYREQDYGAAIREFQKVFDKYEDSSLADDALFRAGEAAQTLRRCSEARAYFGVLRQK 264

Query: 257 YPQ 259
           YP+
Sbjct: 265 YPR 267


>gi|160885705|ref|ZP_02066708.1| hypothetical protein BACOVA_03709 [Bacteroides ovatus ATCC 8483]
 gi|237719449|ref|ZP_04549930.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|260174433|ref|ZP_05760845.1| hypothetical protein BacD2_21432 [Bacteroides sp. D2]
 gi|293370226|ref|ZP_06616786.1| outer membrane assembly lipoprotein YfiO [Bacteroides ovatus SD CMC
           3f]
 gi|299146193|ref|ZP_07039261.1| conserved hypothetical protein [Bacteroides sp. 3_1_23]
 gi|315922700|ref|ZP_07918940.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|156108518|gb|EDO10263.1| hypothetical protein BACOVA_03709 [Bacteroides ovatus ATCC 8483]
 gi|229451309|gb|EEO57100.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|292634723|gb|EFF53252.1| outer membrane assembly lipoprotein YfiO [Bacteroides ovatus SD CMC
           3f]
 gi|298516684|gb|EFI40565.1| conserved hypothetical protein [Bacteroides sp. 3_1_23]
 gi|313696575|gb|EFS33410.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 267

 Score = 36.6 bits (83), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 50/236 (21%), Positives = 93/236 (39%), Gaps = 24/236 (10%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           TD  Y+   YE A  +  +  ++++    N+          A +SL M     Y+   YQ
Sbjct: 28  TDYEYK---YEAAKNYFAKGQYNRSATLLNELITILKGTDKAEESLYMLGMSYYNQKDYQ 84

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP---YDQRATKLMLQYMSRIVER 168
            AA     Y   YP     +   +  G +   +  D P    DQ +T   +Q +   +E 
Sbjct: 85  TAAQTFITYFNTYPRGTFTELARFHAGKA---LFLDTPEPRLDQSSTYQAIQQLQMFMEY 141

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV-----AAIPRFQLVLANYSDA 223
           + NS   + A+  +   +++L  KE+   R Y   G Y+     + +   Q  L +Y   
Sbjct: 142 FPNSTKKQEAQDMIFALQDKLVLKELYSARLYYNLGNYLGNNYESCVITAQNALKDYPYT 201

Query: 224 EHAEEAMARLVEAYVALAL-------MDEAREVVS---LIQERYPQGYWARYVETL 269
           ++ EE    ++ A   +A+       MD  RE +      +  +P+  + +  E +
Sbjct: 202 DYREELSILVLRARHEMAIYSVEDKKMDRYRETIDEYYAFKNEFPESKYLKEAEKI 257


>gi|167763754|ref|ZP_02435881.1| hypothetical protein BACSTE_02134 [Bacteroides stercoris ATCC
           43183]
 gi|167697870|gb|EDS14449.1| hypothetical protein BACSTE_02134 [Bacteroides stercoris ATCC
           43183]
          Length = 1010

 Score = 36.6 bits (83), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 58/139 (41%), Gaps = 33/139 (23%)

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-----RFYVTVG 185
           DY YY + +  + + +D  YD + T L     +R+ ++Y NSPY   A     R YV  G
Sbjct: 591 DYSYYQLAL-VSGLQKD--YDGKITLL-----NRLADKYPNSPYAVSALYEKGRSYVQ-G 641

Query: 186 RNQLAA-------------------KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
           RN   A                      EIG  Y +  +Y  AI  ++ V+  Y  +E A
Sbjct: 642 RNNSQAIATFRELLNKYPESPVSRKAATEIGLLYYQNDDYNRAIEAYKYVITQYPGSEEA 701

Query: 227 EEAMARLVEAYVALALMDE 245
             AM  L   YV    +DE
Sbjct: 702 RLAMRDLKSIYVEANRVDE 720


>gi|189219588|ref|YP_001940229.1| TPR repeats containing protein [Methylacidiphilum infernorum V4]
 gi|189186446|gb|ACD83631.1| TPR repeats containing protein [Methylacidiphilum infernorum V4]
          Length = 350

 Score = 36.6 bits (83), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 27/133 (20%), Positives = 60/133 (45%)

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           KY  A +     I +YP     D   Y +G ++ Q  +   YDQ +T+  ++     + R
Sbjct: 190 KYTDAIATFNRLIDKYPNHSLADDAQYEIGYTWYQASQASEYDQSSTEKAIEGFEDYIVR 249

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y +   V+ A+ ++   +++       I ++Y +   + AA   +  V+     ++ A+ 
Sbjct: 250 YPSGDKVEAAKAHIAELKSKSTLGSFHIAQFYERAKNFKAAYIYYSDVIKQNPTSDQAKI 309

Query: 229 AMARLVEAYVALA 241
           A  ++V+ +  +A
Sbjct: 310 AQQKIVQLHPLVA 322


>gi|325996655|gb|ADZ52060.1| competence lipoprotein [Helicobacter pylori 2018]
          Length = 220

 Score = 36.6 bits (83), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 3/121 (2%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           N   A  Y++    +   + +  +++L          +Y  A+   +EYI ++    NVD
Sbjct: 52  NLETADNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVD 111

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS---PYVKGARFYVTVGRNQ 188
           Y+ +L   S+    ++   DQ      +  +   +E+Y NS   PYV+  +    +G+N+
Sbjct: 112 YLTFLKLQSHYYAFKNHSKDQEFISNAIVSLGEFIEKYPNSRYRPYVEYMQIKFILGQNE 171

Query: 189 L 189
           L
Sbjct: 172 L 172


>gi|283780651|ref|YP_003371406.1| hypothetical protein Psta_2881 [Pirellula staleyi DSM 6068]
 gi|283439104|gb|ADB17546.1| Tetratricopeptide TPR_2 repeat protein [Pirellula staleyi DSM 6068]
          Length = 1076

 Score = 36.6 bits (83), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 23/113 (20%), Positives = 53/113 (46%), Gaps = 13/113 (11%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           K + F KA   + + ++DFP +    +SL       YSAGK  ++ +  E+ I  +P+S 
Sbjct: 135 KAEMFGKAATSYAKLAKDFPKSKFVEESLFYQGESLYSAGKKGESLAPYEQLIKDFPKST 194

Query: 129 NVDYVYYLVG-------------MSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
             +   Y +G              ++  ++++ P  + AT++ ++    ++++
Sbjct: 195 RREETLYALGCTQEELGKYEPALATFETLLKEFPESKLATEVTMRKAEALLQK 247


>gi|300771724|ref|ZP_07081599.1| conserved hypothetical lipoprotein [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|300761713|gb|EFK58534.1| conserved hypothetical lipoprotein [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 304

 Score = 36.6 bits (83), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 37/171 (21%), Positives = 69/171 (40%), Gaps = 3/171 (1%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y++AV F +++ ++KA   F+   + +     A      +A+  Y    Y  A    +++
Sbjct: 40  YQEAVKFYEKKKYTKALALFDDLMQRYRGQAEAEDLYYYTAYTNYRLKDYTSARYHFKQF 99

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
              +P S   +   ++    +         DQ  T+  +  +   V  Y  S   K A  
Sbjct: 100 AQTFPNSAKAEECRFMTAYCFYLDSPRSSLDQENTRKAIDELQLFVNLYPESEKAKEAAD 159

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRG---EYVAAIPRFQLVLANYSDAEHAEE 228
            +   R++L  K     + Y   G   +Y AA+   + VL  Y D ++AEE
Sbjct: 160 LIQQLRDKLEKKAFSNAKLYYDMGLNDDYKAAVIALENVLKEYPDTKYAEE 210


>gi|323697458|ref|ZP_08109370.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
           sp. ND132]
 gi|323457390|gb|EGB13255.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
           desulfuricans ND132]
          Length = 1110

 Score = 36.6 bits (83), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 38/65 (58%)

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           G Y+ ++G+Y  A  +FQ ++  Y + + A++A   L ++   L  +D+A ++V  I +R
Sbjct: 584 GEYWYRKGDYKKAADQFQQLIQTYPEHQLAKQAAYYLADSLDRLGYLDQAYQIVDYIDKR 643

Query: 257 YPQGY 261
           +P  Y
Sbjct: 644 WPDYY 648


>gi|307638050|gb|ADN80500.1| competence lipoprotein [Helicobacter pylori 908]
          Length = 220

 Score = 36.6 bits (83), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 3/121 (2%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           N   A  Y++    +   + +  +++L          +Y  A+   +EYI ++    NVD
Sbjct: 52  NLETADNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVD 111

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS---PYVKGARFYVTVGRNQ 188
           Y+ +L   S+    ++   DQ      +  +   +E+Y NS   PYV+  +    +G+N+
Sbjct: 112 YLTFLKLQSHYYAFKNHSKDQEFISNAIVSLGEFIEKYPNSRYRPYVEYMQIKFILGQNE 171

Query: 189 L 189
           L
Sbjct: 172 L 172


>gi|29348225|ref|NP_811728.1| TPR domain-containing protein [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29340128|gb|AAO77922.1| TPR domain-containing protein [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 1003

 Score = 36.2 bits (82), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 23/107 (21%)

Query: 162 MSRIVERYTNSPYVKGA-----RFYVTVGRNQLAA---KEV---------------EIGR 198
           ++R+V +Y +SPY   A     R YV +  N  A    KE+               EIG 
Sbjct: 606 LNRLVGKYPSSPYAVNAIYEKGRSYVLMDNNSQAITSFKELLEKYPESPVSRKAAAEIGL 665

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
            Y + G +  AI  ++ V+  Y  +E A  AM  +   YV L  +DE
Sbjct: 666 LYYQNGNFDQAINAYKQVIEKYPGSEEARLAMRDMKSIYVDLNRIDE 712


>gi|317010057|gb|ADU80637.1| hypothetical protein HPIN_07240 [Helicobacter pylori India7]
          Length = 220

 Score = 36.2 bits (82), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 3/121 (2%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           N   A  Y++    +   + +  +++L          +Y  A+   +EYI ++    NVD
Sbjct: 52  NLETADNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVD 111

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS---PYVKGARFYVTVGRNQ 188
           Y+ +L   S+    ++   DQ      +  +   +E+Y NS   PYV+  +    +G+N+
Sbjct: 112 YLTFLKLQSHYYAFKNHSKDQEFISNAIVSLGEFIEKYPNSRYRPYVEYMQIKFILGQNE 171

Query: 189 L 189
           L
Sbjct: 172 L 172


>gi|317011700|gb|ADU85447.1| competence lipoprotein ComL [Helicobacter pylori SouthAfrica7]
          Length = 220

 Score = 36.2 bits (82), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 3/121 (2%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           N   A  Y++    +   + +  +++L          +Y  A+   +EYI ++    NVD
Sbjct: 52  NLETADNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVD 111

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS---PYVKGARFYVTVGRNQ 188
           Y+ +L   S+    ++   DQ      +  +   +E+Y NS   PYV+  +    +G+N+
Sbjct: 112 YLTFLKLQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYMQIKFILGQNE 171

Query: 189 L 189
           L
Sbjct: 172 L 172


>gi|308185160|ref|YP_003929293.1| hypothetical protein HPSJM_07080 [Helicobacter pylori SJM180]
 gi|308061080|gb|ADO02976.1| hypothetical protein HPSJM_07080 [Helicobacter pylori SJM180]
 gi|317014772|gb|ADU82208.1| putative lipoprotein [Helicobacter pylori Gambia94/24]
          Length = 220

 Score = 36.2 bits (82), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 3/121 (2%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           N   A  Y++    +   + +  +++L          +Y  A+   +EYI ++    NVD
Sbjct: 52  NLETADNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVD 111

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS---PYVKGARFYVTVGRNQ 188
           Y+ +L   S+    ++   DQ      +  +   +E+Y NS   PYV+  +    +G+N+
Sbjct: 112 YLTFLKLQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYMQIKFILGQNE 171

Query: 189 L 189
           L
Sbjct: 172 L 172


>gi|298737038|ref|YP_003729568.1| hypothetical protein HPB8_1547 [Helicobacter pylori B8]
 gi|298356232|emb|CBI67104.1| conserved hypothetical protein [Helicobacter pylori B8]
          Length = 220

 Score = 36.2 bits (82), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 3/121 (2%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           N   A  Y++    +   + +  +++L          +Y  A+   +EYI ++    NVD
Sbjct: 52  NLETADNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVD 111

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS---PYVKGARFYVTVGRNQ 188
           Y+ +L   S+    ++   DQ      +  +   +E+Y NS   PYV+  +    +G+N+
Sbjct: 112 YLTFLKLQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYMQIKFILGQNE 171

Query: 189 L 189
           L
Sbjct: 172 L 172


>gi|157872303|ref|XP_001684700.1| mitochondrial carrier protein-like protein [Leishmania major]
 gi|68127770|emb|CAJ06114.1| mitochondrial carrier protein-like protein [Leishmania major strain
           Friedlin]
          Length = 338

 Score = 36.2 bits (82), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
           S A   R  P++  AT +ML+Y+ ++ ERYTN  Y  G+    ++G N+L
Sbjct: 280 SLALFSRSAPHNI-ATFVMLEYLRKMRERYTNRAYTSGSSVDKSIGLNRL 328


>gi|261420022|ref|YP_003253704.1| hypothetical protein GYMC61_2632 [Geobacillus sp. Y412MC61]
 gi|319766836|ref|YP_004132337.1| hypothetical protein GYMC52_1763 [Geobacillus sp. Y412MC52]
 gi|261376479|gb|ACX79222.1| Tetratricopeptide TPR_2 repeat protein [Geobacillus sp. Y412MC61]
 gi|317111702|gb|ADU94194.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacillus sp.
            Y412MC52]
          Length = 1385

 Score = 36.2 bits (82), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 3/69 (4%)

Query: 63   KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
            +AV++L+E    KA         + P   +AR++L++        G+YQ+AA+L E Y  
Sbjct: 1239 QAVVWLQEGQHEKAERQLEAIVAEEP---LAREALMLLGEQYMETGRYQEAAALWERYTD 1295

Query: 123  QYPESKNVD 131
             YPE + ++
Sbjct: 1296 WYPEDEELN 1304


>gi|217032410|ref|ZP_03437904.1| hypothetical protein HPB128_164g10 [Helicobacter pylori B128]
 gi|216945889|gb|EEC24507.1| hypothetical protein HPB128_164g10 [Helicobacter pylori B128]
          Length = 207

 Score = 36.2 bits (82), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 3/121 (2%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           N   A  Y++    +   + +  +++L          +Y  A+   +EYI ++    NVD
Sbjct: 39  NLETADNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVD 98

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS---PYVKGARFYVTVGRNQ 188
           Y+ +L   S+    ++   DQ      +  +   +E+Y NS   PYV+  +    +G+N+
Sbjct: 99  YLTFLKLQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYMQIKFILGQNE 158

Query: 189 L 189
           L
Sbjct: 159 L 159


>gi|210135563|ref|YP_002302002.1| competence lipoprotein ComL [Helicobacter pylori P12]
 gi|210133531|gb|ACJ08522.1| competence lipoprotein ComL [Helicobacter pylori P12]
 gi|317179821|dbj|BAJ57607.1| competence lipoprotein [Helicobacter pylori F32]
          Length = 220

 Score = 36.2 bits (82), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 3/121 (2%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           N   A  Y++    +   + +  +++L          +Y  A+   +EYI ++    NVD
Sbjct: 52  NLETADNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVD 111

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS---PYVKGARFYVTVGRNQ 188
           Y+ +L   S+    ++   DQ      +  +   +E+Y NS   PYV+  +    +G+N+
Sbjct: 112 YLTFLKLQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYMQIKFILGQNE 171

Query: 189 L 189
           L
Sbjct: 172 L 172


>gi|15645988|ref|NP_208169.1| competence lipoprotein (comL) [Helicobacter pylori 26695]
 gi|108563749|ref|YP_628065.1| competence lipoprotein [Helicobacter pylori HPAG1]
 gi|188528168|ref|YP_001910855.1| competence lipoprotein [Helicobacter pylori Shi470]
 gi|217034451|ref|ZP_03439864.1| hypothetical protein HP9810_11g33 [Helicobacter pylori 98-10]
 gi|254779917|ref|YP_003058023.1| hypothetical protein HELPY_1365 [Helicobacter pylori B38]
 gi|308183491|ref|YP_003927618.1| hypothetical protein HPPC_06800 [Helicobacter pylori PeCan4]
 gi|2314548|gb|AAD08420.1| competence lipoprotein (comL) [Helicobacter pylori 26695]
 gi|107837522|gb|ABF85391.1| competence lipoprotein [Helicobacter pylori HPAG1]
 gi|188144408|gb|ACD48825.1| competence lipoprotein [Helicobacter pylori Shi470]
 gi|216943121|gb|EEC22595.1| hypothetical protein HP9810_11g33 [Helicobacter pylori 98-10]
 gi|254001829|emb|CAX30072.1| Conserved hypothetical protein [Helicobacter pylori B38]
 gi|261837482|gb|ACX97248.1| competence lipoprotein [Helicobacter pylori 51]
 gi|261838898|gb|ACX98663.1| competence lipoprotein (comL) [Helicobacter pylori 52]
 gi|308064154|gb|ADO06041.1| hypothetical protein HPSAT_06685 [Helicobacter pylori Sat464]
 gi|308065676|gb|ADO07568.1| hypothetical protein HPPC_06800 [Helicobacter pylori PeCan4]
 gi|315586018|gb|ADU40399.1| competence lipoprotein [Helicobacter pylori 35A]
 gi|317013165|gb|ADU83773.1| hypothetical protein HPLT_06915 [Helicobacter pylori Lithuania75]
 gi|317176833|dbj|BAJ54622.1| competence lipoprotein [Helicobacter pylori F16]
 gi|317178334|dbj|BAJ56122.1| competence lipoprotein [Helicobacter pylori F30]
 gi|317181315|dbj|BAJ59099.1| competence lipoprotein [Helicobacter pylori F57]
 gi|332672817|gb|AEE69634.1| competence lipoprotein [Helicobacter pylori 83]
          Length = 220

 Score = 36.2 bits (82), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 3/121 (2%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           N   A  Y++    +   + +  +++L          +Y  A+   +EYI ++    NVD
Sbjct: 52  NLETADNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVD 111

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS---PYVKGARFYVTVGRNQ 188
           Y+ +L   S+    ++   DQ      +  +   +E+Y NS   PYV+  +    +G+N+
Sbjct: 112 YLTFLKLQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYMQIKFILGQNE 171

Query: 189 L 189
           L
Sbjct: 172 L 172


>gi|332291070|ref|YP_004429679.1| outer membrane assembly lipoprotein YfiO [Krokinobacter diaphorus
           4H-3-7-5]
 gi|332169156|gb|AEE18411.1| outer membrane assembly lipoprotein YfiO [Krokinobacter diaphorus
           4H-3-7-5]
          Length = 270

 Score = 36.2 bits (82), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 69/173 (39%), Gaps = 14/173 (8%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y  G Y       E ++  +P+S   +   +    SY +       DQ  T + L+ +  
Sbjct: 77  YELGDYYSGGYQFERFVKSFPQSTKREEAAFKSAESYYRRSPRFNLDQGDTYIALEKLQG 136

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK----RGEYVAAIPRFQLVLANY 220
            +  Y +S  V  A   V     +L  K  EI + Y K    RG +  AI  F   L + 
Sbjct: 137 FINEYPDSEQVDDANAKVQELNTKLERKSYEIAKGYNKIGASRGTFPNAISAFDNFLLDN 196

Query: 221 SDAEHAEEAMARLVEAYVALAL----------MDEAREVVSLIQERYPQGYWA 263
             + + E+A+     +   LA+          ++ A+   + +++ YPQG +A
Sbjct: 197 PGSIYREDALYWKFNSAYQLAMGSVKRLQVERLEAAKAAYNALEKYYPQGKYA 249


>gi|88803410|ref|ZP_01118936.1| hypothetical protein PI23P_12497 [Polaribacter irgensii 23-P]
 gi|88780976|gb|EAR12155.1| hypothetical protein PI23P_12497 [Polaribacter irgensii 23-P]
          Length = 270

 Score = 36.2 bits (82), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 67/177 (37%), Gaps = 5/177 (2%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E Y+ AV   + QN+ KA   F + +  +       +   M A   ++   Y  A     
Sbjct: 18  EQYKMAVKMYETQNYDKAIRLFEKVTPSYRGKPQMERIEFMVAQSNFNEKNYSIAGFYFN 77

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            +   + +S   +   +L   SY         D   T   L      +  Y NS  +  A
Sbjct: 78  RFTNNFTKSSKKEEAAFLAAYSYKLASPRFSIDPTETNKALDAFQSFINTYPNSDKIIEA 137

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGE-----YVAAIPRFQLVLANYSDAEHAEEAM 230
             Y    R++L  K  EI + Y K  +     Y AAI  F  +L ++   ++ EEA+
Sbjct: 138 NKYYAEIRSKLEKKYFEIAKTYYKTADYDLRNYKAAIQAFDNLLEDFLGTKYKEEAL 194


>gi|222823961|ref|YP_002575535.1| conserved hypothetical lipoprotein [Campylobacter lari RM2100]
 gi|222539183|gb|ACM64284.1| conserved hypothetical lipoprotein [Campylobacter lari RM2100]
          Length = 218

 Score = 36.2 bits (82), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 77/161 (47%), Gaps = 17/161 (10%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVY-LDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
           +L+ F+L I    A  FL     + + D+Y L S+       E Y++ +  L+E+N   A
Sbjct: 3   KLFIFSLII----AGLFLGACSSKKAEDLYNLSSM-------EWYQQIIKDLQEKNLEAA 51

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            +++   + +     +  ++LL+ A    S  +Y+ A    +EY+ ++ +S+NV Y+ YL
Sbjct: 52  DKHYTSMAAEHIADPLLEQTLLILAQAHISEEEYEMANFYLDEYLNKFGDSQNVAYIRYL 111

Query: 137 -VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            +   +      VP   R   LML+ +  I E   + P V+
Sbjct: 112 KIKAKFDSFA--VP--NRNQALMLKTIEEIKEYNQSYPNVQ 148


>gi|114330318|ref|YP_746540.1| TPR repeat-containing protein [Nitrosomonas eutropha C91]
 gi|114307332|gb|ABI58575.1| Tetratricopeptide TPR_2 repeat protein [Nitrosomonas eutropha C91]
          Length = 273

 Score = 36.2 bits (82), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 22/134 (16%)

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
           +A+  +  G Y  + +  E +++++P+S       Y +G ++        Y  R     +
Sbjct: 158 AAYALFKDGDYSGSIASFESFLSRHPQSALAPAAAYWIGNAH--------YAMRNFDKAI 209

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
               R++E Y +SP V         G   +A+ +VEIG+    R   V        ++ N
Sbjct: 210 AAQQRLIETYPDSPKVPD-------GLLNMASSQVEIGQKAAARKTLVN-------LITN 255

Query: 220 YSDAEHAEEAMARL 233
           Y   E AE+A  RL
Sbjct: 256 YPGTEAAEKAKRRL 269


>gi|15612357|ref|NP_224010.1| hypothetical protein jhp1292 [Helicobacter pylori J99]
 gi|4155904|gb|AAD06874.1| putative [Helicobacter pylori J99]
          Length = 220

 Score = 36.2 bits (82), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 3/121 (2%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           N   A  Y++    +   + +  +++L          +Y  A+   +EYI ++    NVD
Sbjct: 52  NLETADNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVD 111

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS---PYVKGARFYVTVGRNQ 188
           Y+ +L   S+    ++   DQ      +  +   +E+Y NS   PYV+  +    +G+N+
Sbjct: 112 YLTFLKLQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYMQIKFILGQNE 171

Query: 189 L 189
           L
Sbjct: 172 L 172


>gi|152981712|ref|YP_001354159.1| Tol-Pal cell envelope complex subunit YbgF [Janthinobacterium sp.
           Marseille]
 gi|151281789|gb|ABR90199.1| YbgF subunit of Tol-Pal Cell Envelope Complex [Janthinobacterium
           sp. Marseille]
          Length = 243

 Score = 36.2 bits (82), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 31/144 (21%), Positives = 60/144 (41%), Gaps = 22/144 (15%)

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
           G + +S   SA   + AG Y+++ +   +++ +YPES       Y +G +Y        Y
Sbjct: 119 GQSEQSAYDSALALFKAGDYKKSGTAFGDFVQRYPESAYAPSAQYWIGNAY--------Y 170

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
            QR  K  +     ++++Y ++P    A   +   + +L               +  AA 
Sbjct: 171 AQRDYKNAITAQQALLKKYPDNPKAADALLNIASSQTELK--------------DRAAAK 216

Query: 211 PRFQLVLANYSDAEHAEEAMARLV 234
              + ++A Y +A  A+ A  RL 
Sbjct: 217 KTLESLVAKYPNAPAAQTAKERLA 240


>gi|297380560|gb|ADI35447.1| competence lipoprotein (comL) [Helicobacter pylori v225d]
          Length = 220

 Score = 36.2 bits (82), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 3/121 (2%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           N   A  Y++    +   + +  +++L          +Y  A+   +EYI ++    NVD
Sbjct: 52  NLETADNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVD 111

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS---PYVKGARFYVTVGRNQ 188
           Y+ +L   S+    ++   DQ      +  +   +E+Y NS   PYV+  +    +G+N+
Sbjct: 112 YLTFLKLQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYMQIKFILGQNE 171

Query: 189 L 189
           L
Sbjct: 172 L 172


>gi|255691532|ref|ZP_05415207.1| putative lipoprotein [Bacteroides finegoldii DSM 17565]
 gi|260622922|gb|EEX45793.1| putative lipoprotein [Bacteroides finegoldii DSM 17565]
          Length = 267

 Score = 35.8 bits (81), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 49/236 (20%), Positives = 93/236 (39%), Gaps = 24/236 (10%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           TD  Y+   YE A  +  +  ++++    N+          A +SL M     Y+   YQ
Sbjct: 28  TDYEYK---YEAAKNYFAKGQYNRSATLLNELITILKGTDKAEESLYMLGMSYYNQKDYQ 84

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP---YDQRATKLMLQYMSRIVER 168
            AA     Y   YP     +   +  G +   +  D P    DQ +T   +Q +   +E 
Sbjct: 85  TAAQTFITYFNTYPRGTFTELARFHAGKA---LFLDTPEPRLDQSSTYQAIQQLQMFMEY 141

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV-----AAIPRFQLVLANYSDA 223
           + NS   + A+  +   +++L  KE+   + Y   G Y+     + +   Q  L +Y   
Sbjct: 142 FPNSSKKQEAQDMIFALQDKLVLKELYSAKLYYNLGNYLGNNYESCVITAQNALKDYPYT 201

Query: 224 EHAEEAMARLVEAYVALAL-------MDEAREVVS---LIQERYPQGYWARYVETL 269
           ++ EE    ++ A   +A+       MD  RE +      +  +P+  + +  E +
Sbjct: 202 DYREELSILILRARYEMAIYSVEDKKMDRYRETIDEYYAFKNEFPESKYLKEAEKI 257


>gi|328947786|ref|YP_004365123.1| ATPase AAA lipoprotein [Treponema succinifaciens DSM 2489]
 gi|328448110|gb|AEB13826.1| putative lipoprotein [Treponema succinifaciens DSM 2489]
          Length = 603

 Score = 35.8 bits (81), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 62/151 (41%), Gaps = 11/151 (7%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y   +L LK+    KA EYF     +  +AG  ++ L   A   +  GKY+ A S GEE 
Sbjct: 214 YLMGILCLKQNENEKALEYFKLS--NGKYAGGTKEILESVAKACFLTGKYELALSFGEEL 271

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER----YTNSPYVK 176
           ++++P+   +     L         +   +  R   L     S ++ R      N  Y++
Sbjct: 272 LSRFPQDTELLKTCALSAFHLGDFDKTEGFVVRVLLLEPDNTSYVLLRAKILMENQDYIR 331

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
            +     V +   A+KE     YYL R + +
Sbjct: 332 ASSLLDAVEKKNSASKE-----YYLLRTQLL 357


>gi|188996311|ref|YP_001930562.1| Tetratricopeptide TPR_2 repeat protein [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188931378|gb|ACD66008.1| Tetratricopeptide TPR_2 repeat protein [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 938

 Score = 35.8 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 87/201 (43%), Gaps = 29/201 (14%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKY 110
           D+  ++  Y  A  F    +F +A + F++    +        RK+LL  A   Y+ G+ 
Sbjct: 563 DLIAKKAYYLYAYTFFSSGDFVRASQEFSKFLEKYKNDDDIYTRKALLRLADSYYNLGER 622

Query: 111 QQAASLGEEYITQYPESKN-VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
             A ++ +++IT+Y  +K+ +D  Y L+ +       DV             +   + +Y
Sbjct: 623 DLAVNIYKDFITKYSGTKDSIDAAYNLIILESKGSSEDVE----------SMIKSFLAKY 672

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
            N P                   ++++   Y  +G+   AI  +Q V A  S+++ +  A
Sbjct: 673 PNYPLAN--------------ILKIQLAEIYQNKGKIEDAIKIYQEVAA--SNSKESALA 716

Query: 230 MARLVEAYVALALMDEAREVV 250
             +L E+Y  L  +D+A++V+
Sbjct: 717 TYKLAESYYKLNQLDKAKQVL 737


>gi|212692725|ref|ZP_03300853.1| hypothetical protein BACDOR_02223 [Bacteroides dorei DSM 17855]
 gi|212664661|gb|EEB25233.1| hypothetical protein BACDOR_02223 [Bacteroides dorei DSM 17855]
          Length = 967

 Score = 35.8 bits (81), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 68/180 (37%), Gaps = 29/180 (16%)

Query: 80  FNQCSRDFPFA-----GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
           F Q  +D+  A      +   SL   AFV+     Y          I+ YPES+ +D   
Sbjct: 526 FEQARQDYARAVEIDPSLGDYSLYQEAFVRGLQRDYNGKVQTLNRLISDYPESQYMDDAL 585

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYM-SRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
           Y  G ++ QM  +     R   L+ ++  S +  R  N                      
Sbjct: 586 YEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAAN---------------------- 623

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            EIG  Y +  +Y  AI  ++ V+A+Y  +E A  A   L   Y+ L  +DE     S I
Sbjct: 624 -EIGLLYYQDDKYPEAIQAYKQVIASYPGSEEARLAQRDLKSIYIDLNKVDEYANFASTI 682


>gi|270264222|ref|ZP_06192489.1| cellulose synthase subunit [Serratia odorifera 4Rx13]
 gi|270041871|gb|EFA14968.1| cellulose synthase subunit [Serratia odorifera 4Rx13]
          Length = 1146

 Score = 35.8 bits (81), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 14/100 (14%)

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK--EVEIGRYYLKRGEYVAAIP 211
           A +L +Q M    ER   +    GA  Y+   R Q A    ++++  + L RGEY AA+ 
Sbjct: 560 AQRLKMQAMLEQAERLRAAGDEPGAVAYL---RRQPADTRIDLQLADWALARGEYDAALA 616

Query: 212 RFQLVLA---NYSDAEHAEEAMARLVEAYVALALMDEARE 248
            +Q V A   N  DA   E      +EAYVA   + EAR+
Sbjct: 617 DYQRVRAREPNNPDARLGE------IEAYVAQGKLSEARQ 650


>gi|237709421|ref|ZP_04539902.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|229456477|gb|EEO62198.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 967

 Score = 35.8 bits (81), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 68/180 (37%), Gaps = 29/180 (16%)

Query: 80  FNQCSRDFPFA-----GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
           F Q  +D+  A      +   SL   AFV+     Y          I+ YPES+ +D   
Sbjct: 526 FEQARQDYARAVEIDPSLGDYSLYQEAFVRGLQRDYNGKVQTLNRLISDYPESQYMDDAL 585

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYM-SRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
           Y  G ++ QM  +     R   L+ ++  S +  R  N                      
Sbjct: 586 YEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAAN---------------------- 623

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            EIG  Y +  +Y  AI  ++ V+A+Y  +E A  A   L   Y+ L  +DE     S I
Sbjct: 624 -EIGLLYYQDDKYPEAIQAYKQVIASYPGSEEARLAQRDLKSIYIDLNKVDEYANFASTI 682


>gi|208435271|ref|YP_002266937.1| competence lipoprotein [Helicobacter pylori G27]
 gi|208433200|gb|ACI28071.1| competence lipoprotein [Helicobacter pylori G27]
          Length = 220

 Score = 35.8 bits (81), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 3/121 (2%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           N   A  Y++    +   + +  +++L          +Y  A+   +EYI ++    NVD
Sbjct: 52  NLETADNYYSSLQSEHINSPLVPEAMLALGQAHMKKREYVLASFYFDEYIKRFGTKDNVD 111

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS---PYVKGARFYVTVGRNQ 188
           Y+ +L   S+    ++   DQ      +  +   +E+Y NS   PYV+  +    +G+N+
Sbjct: 112 YLTFLKLQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYMQIKFILGQNE 171

Query: 189 L 189
           L
Sbjct: 172 L 172


>gi|237724975|ref|ZP_04555456.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|229436713|gb|EEO46790.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
          Length = 967

 Score = 35.8 bits (81), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 68/180 (37%), Gaps = 29/180 (16%)

Query: 80  FNQCSRDFPFA-----GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
           F Q  +D+  A      +   SL   AFV+     Y          I+ YPES+ +D   
Sbjct: 526 FEQARQDYARAVEIDPSLGDYSLYQEAFVRGLQRDYNGKVQTLNRLISDYPESQYMDDAL 585

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYM-SRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
           Y  G ++ QM  +     R   L+ ++  S +  R  N                      
Sbjct: 586 YEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAAN---------------------- 623

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            EIG  Y +  +Y  AI  ++ V+A+Y  +E A  A   L   Y+ L  +DE     S I
Sbjct: 624 -EIGLLYYQDDKYPEAIQAYKQVIASYPGSEEARLAQRDLKSIYIDLNKVDEYANFASTI 682


>gi|207091899|ref|ZP_03239686.1| hypothetical protein HpylHP_02181 [Helicobacter pylori
           HPKX_438_AG0C1]
          Length = 198

 Score = 35.8 bits (81), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 3/121 (2%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           N   A  Y++    +   + +  +++L          +Y  A+   +EYI ++    NVD
Sbjct: 30  NLETADNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVD 89

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS---PYVKGARFYVTVGRNQ 188
           Y+ +L   S+    ++   DQ      +  +   +E+Y NS   PYV+  +    +G+N+
Sbjct: 90  YLTFLKLQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYMQIKFILGQNE 149

Query: 189 L 189
           L
Sbjct: 150 L 150


>gi|15606983|ref|NP_214365.1| hypothetical protein aq_1989 [Aquifex aeolicus VF5]
 gi|2984229|gb|AAC07758.1| putative protein [Aquifex aeolicus VF5]
          Length = 853

 Score = 35.8 bits (81), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 12/96 (12%)

Query: 178 ARFYVTVGRNQLAAK--------EVEI-GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           A+  +++G+ +LA K        EV + G  Y   GEY  AIP F+ +  N    E+  +
Sbjct: 476 AKAAISLGKGELARKFLYNETPEEVYLTGLSYFIDGEYEKAIPYFEKLTQN---EEYRLK 532

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
           A+ +L ++Y  L   ++AR + +LI  +Y Q   A+
Sbjct: 533 ALLKLADSYYNLGQKEKARAIYTLILSKYSQNPEAK 568


>gi|56420359|ref|YP_147677.1| hypothetical protein GK1824 [Geobacillus kaustophilus HTA426]
 gi|47076784|dbj|BAD18326.1| hypothetical protein [Geobacillus kaustophilus]
 gi|56380201|dbj|BAD76109.1| hypothetical protein [Geobacillus kaustophilus HTA426]
          Length = 1358

 Score = 35.8 bits (81), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 3/69 (4%)

Query: 63   KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
            +AV++L+E    KA         + P   +AR++L++        G+YQ+AA+L E Y  
Sbjct: 1240 QAVVWLQEGQHEKAERQLEAIVAEEP---LAREALMLLGEQYMETGRYQEAAALWERYAD 1296

Query: 123  QYPESKNVD 131
             YPE + ++
Sbjct: 1297 WYPEDEELN 1305


>gi|308062663|gb|ADO04551.1| hypothetical protein HPCU_07045 [Helicobacter pylori Cuz20]
          Length = 220

 Score = 35.8 bits (81), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 3/121 (2%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           N   A  Y++    +   + +  +++L          +Y  A+   +EYI ++    NVD
Sbjct: 52  NLETADNYYSSLQSEHINSPLLPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVD 111

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS---PYVKGARFYVTVGRNQ 188
           Y+ +L   S+    ++   DQ      +  +   +E+Y NS   PYV+  +    +G+N+
Sbjct: 112 YLTFLKLQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYMQIKFILGQNE 171

Query: 189 L 189
           L
Sbjct: 172 L 172


>gi|253569409|ref|ZP_04846819.1| TPR domain-containing protein [Bacteroides sp. 1_1_6]
 gi|251841428|gb|EES69509.1| TPR domain-containing protein [Bacteroides sp. 1_1_6]
          Length = 1003

 Score = 35.8 bits (81), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 23/107 (21%)

Query: 162 MSRIVERYTNSPYVKGA-----RFYVTVGRNQLAA---KEV---------------EIGR 198
           ++R+V +Y +SPY   A     R YV +  N  A    KE+               EIG 
Sbjct: 606 LNRLVGKYPSSPYAVNAIYEKGRSYVLMDNNGQAITSFKELLEKYPESPVSRKAAAEIGL 665

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
            Y + G +  AI  ++ V+  Y  +E A  AM  +   YV L  +DE
Sbjct: 666 LYYQNGNFDQAINAYKQVIEKYPGSEEARLAMRDMKSIYVDLNRIDE 712


>gi|254426965|ref|ZP_05040672.1| tol-pal system protein YbgF, putative [Alcanivorax sp. DG881]
 gi|196193134|gb|EDX88093.1| tol-pal system protein YbgF, putative [Alcanivorax sp. DG881]
          Length = 254

 Score = 35.8 bits (81), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 32/69 (46%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           KE +  KA  +F   + D+P    A KSL + A +Q  AG+   A     + I QYP+S 
Sbjct: 181 KEPDLKKAEGHFQAVADDYPDHSKAPKSLYILAVMQAKAGEVSPAKVNLHKLIKQYPDSS 240

Query: 129 NVDYVYYLV 137
                  L+
Sbjct: 241 EAGQAKSLL 249


>gi|294775054|ref|ZP_06740583.1| putative tol-pal system protein YbgF [Bacteroides vulgatus PC510]
 gi|294451098|gb|EFG19569.1| putative tol-pal system protein YbgF [Bacteroides vulgatus PC510]
          Length = 960

 Score = 35.8 bits (81), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 67/180 (37%), Gaps = 29/180 (16%)

Query: 80  FNQCSRDFPFA-----GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
           F Q  +D+  A      +   SL   AFV+     Y          I+ YPES+ +D   
Sbjct: 519 FEQARQDYARAVEIDPSLGDYSLYQEAFVRGLQRDYNGKVQTLNRLISDYPESQYMDDAL 578

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYM-SRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
           Y  G ++ QM  +     R   L+ ++  S +  R  N                      
Sbjct: 579 YEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAAN---------------------- 616

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            EIG  Y +  +Y  AI  ++ V+A Y  +E A  A   L   Y+ L  +DE     S I
Sbjct: 617 -EIGLLYYQDDKYPEAIQAYKQVIAGYPGSEEARLAQRDLKSIYIDLNKVDEYANFASTI 675


>gi|300707042|ref|XP_002995746.1| hypothetical protein NCER_101286 [Nosema ceranae BRL01]
 gi|239604953|gb|EEQ82075.1| hypothetical protein NCER_101286 [Nosema ceranae BRL01]
          Length = 437

 Score = 35.8 bits (81), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 42/214 (19%), Positives = 86/214 (40%), Gaps = 45/214 (21%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSL-LMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
           +N ++ Y+ F   S+ F F+   ++ L L++A + +  GK +QA  L E+   +Y     
Sbjct: 171 KNINEIYDAFGGKSKKFKFSNDEKEVLNLLNAIILHLKGKKEQAILLLEKSTYKYS---- 226

Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLML----------QYMSRIVERYTNSPYVKGAR 179
           + Y  Y + +    +   +P D   T L L           Y+   +++  + P  +   
Sbjct: 227 ILYRAYFLTLKNEYISSSLPLDDEITTLYLYSKIFKDKSDTYLKSAIDKSVDLPIEQKDF 286

Query: 180 FYVTVGRNQLAAKEVE--------------------IGRYYLKRGEYVAAIPRFQLVLAN 219
            YV +    ++ K+VE                    IG YYLK G +   +         
Sbjct: 287 LYVDLLVFYISKKDVEKVNETINNLKETLTPTLLELIGEYYLKSGNHSKMLDLL------ 340

Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
              + H +     L+ A  A+++ D+ ++ + ++
Sbjct: 341 ---SSHPDTPGKLLLTALYAISI-DKKKDAIEIL 370


>gi|220904572|ref|YP_002479884.1| hypothetical protein Ddes_1304 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219868871|gb|ACL49206.1| hypothetical protein Ddes_1304 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 982

 Score = 35.8 bits (81), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 77/194 (39%), Gaps = 19/194 (9%)

Query: 62  EKAVLFLKEQNFS--KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           E + +F K+Q  +  K Y      SR  P A +AR   L  A   Y   KY +A     +
Sbjct: 587 EMSAVFAKDQGGALWKVYTDLAASSRTAPAAVLAR---LKEAMWLYWDKKYTEAMGKAAD 643

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           +I  YPE+ NV     L+  S+ Q + +         L      RI+  +   P V+  R
Sbjct: 644 FIDAYPENANVPQAKDLIWASFQQELNN--------SLAEGNYGRILILWNGFPLVR-ER 694

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +     R + A     + +  L+RG+  AA+      L +  D  + E A       Y+ 
Sbjct: 695 YGALDPRMRYA-----LAQGMLERGDEAAALGMMAEFLKSPMDPNYGEAAFTEFFNRYLK 749

Query: 240 LALMDEAREVVSLI 253
               D+  ++  L+
Sbjct: 750 AGAWDKVLDLGKLV 763


>gi|319639870|ref|ZP_07994599.1| hypothetical protein HMPREF9011_00196 [Bacteroides sp. 3_1_40A]
 gi|317388534|gb|EFV69384.1| hypothetical protein HMPREF9011_00196 [Bacteroides sp. 3_1_40A]
          Length = 960

 Score = 35.8 bits (81), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 67/180 (37%), Gaps = 29/180 (16%)

Query: 80  FNQCSRDFPFA-----GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
           F Q  +D+  A      +   SL   AFV+     Y          I+ YPES+ +D   
Sbjct: 519 FEQARQDYARAVEIDPSLGDYSLYQEAFVRGLQRDYNGKVQTLNRLISDYPESQYMDDAL 578

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYM-SRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
           Y  G ++ QM  +     R   L+ ++  S +  R  N                      
Sbjct: 579 YEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAAN---------------------- 616

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            EIG  Y +  +Y  AI  ++ V+A Y  +E A  A   L   Y+ L  +DE     S I
Sbjct: 617 -EIGLLYYQDDKYPEAIQAYKQVIAGYPGSEEARLAQRDLKSIYIDLNKVDEYANFASTI 675


>gi|195953482|ref|YP_002121772.1| Tetratricopeptide TPR_2 repeat protein [Hydrogenobaculum sp.
           Y04AAS1]
 gi|195933094|gb|ACG57794.1| Tetratricopeptide TPR_2 repeat protein [Hydrogenobaculum sp.
           Y04AAS1]
          Length = 272

 Score = 35.8 bits (81), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 26/44 (59%)

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
           A+  Y +G YQ+A  L +E+I + P SK  +  YY +GM+   M
Sbjct: 154 AYTAYQSGDYQKAKRLFKEFILKNPHSKLTNNAYYWLGMAEKAM 197


>gi|150003900|ref|YP_001298644.1| hypothetical protein BVU_1333 [Bacteroides vulgatus ATCC 8482]
 gi|149932324|gb|ABR39022.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
          Length = 967

 Score = 35.8 bits (81), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 67/180 (37%), Gaps = 29/180 (16%)

Query: 80  FNQCSRDFPFA-----GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
           F Q  +D+  A      +   SL   AFV+     Y          I+ YPES+ +D   
Sbjct: 526 FEQARQDYARAVEIDPSLGDYSLYQEAFVRGLQRDYNGKVQTLNRLISDYPESQYMDDAL 585

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYM-SRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
           Y  G ++ QM  +     R   L+ ++  S +  R  N                      
Sbjct: 586 YEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAAN---------------------- 623

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            EIG  Y +  +Y  AI  ++ V+A Y  +E A  A   L   Y+ L  +DE     S I
Sbjct: 624 -EIGLLYYQDDKYPEAIQAYKQVIAGYPGSEEARLAQRDLKSIYIDLNKVDEYANFASTI 682


>gi|109946693|ref|YP_663921.1| competence lipoprotein [Helicobacter acinonychis str. Sheeba]
 gi|109713914|emb|CAJ98922.1| competence lipoprotein [Helicobacter acinonychis str. Sheeba]
          Length = 217

 Score = 35.4 bits (80), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 3/121 (2%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           N   A  Y++    +   + +  +++L          +Y  A+   +EYI ++    NVD
Sbjct: 49  NLETADNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTEDNVD 108

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS---PYVKGARFYVTVGRNQ 188
           Y+ +L   S+    ++   DQ      +  +   +E+Y NS   PYV+  +    +G+N+
Sbjct: 109 YLTFLKLQSHYYAFKNHSKDQEFISNSIVNLGEFIEKYPNSRYRPYVEYMQVKFILGQNE 168

Query: 189 L 189
           L
Sbjct: 169 L 169


>gi|254880860|ref|ZP_05253570.1| TPR domain-containing protein [Bacteroides sp. 4_3_47FAA]
 gi|254833653|gb|EET13962.1| TPR domain-containing protein [Bacteroides sp. 4_3_47FAA]
          Length = 967

 Score = 35.4 bits (80), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 67/180 (37%), Gaps = 29/180 (16%)

Query: 80  FNQCSRDFPFA-----GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
           F Q  +D+  A      +   SL   AFV+     Y          I+ YPES+ +D   
Sbjct: 526 FEQARQDYARAVEIDPSLGDYSLYQEAFVRGLQRDYNGKVQTLNRLISDYPESQYMDDAL 585

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYM-SRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
           Y  G ++ QM  +     R   L+ ++  S +  R  N                      
Sbjct: 586 YEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAAN---------------------- 623

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            EIG  Y +  +Y  AI  ++ V+A Y  +E A  A   L   Y+ L  +DE     S I
Sbjct: 624 -EIGLLYYQDDKYPEAIQAYKQVIAGYPGSEEARLAQRDLKSIYIDLNKVDEYANFASTI 682


>gi|32267088|ref|NP_861120.1| paralysed flagella protein PflA [Helicobacter hepaticus ATCC 51449]
 gi|32263140|gb|AAP78186.1| paralysed flagella protein PflA [Helicobacter hepaticus ATCC 51449]
          Length = 789

 Score = 35.4 bits (80), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 11/131 (8%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQY-SAGKYQQAASL 116
            Y +    +  QN+ +A +  ++    +P    A+  LL  + A   + S         +
Sbjct: 184 TYSQIKTLMNNQNYIEAVKLIDETLIGYPKTIFAKDLLLFRLRALESFDSVENSDMIVDM 243

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
           G ++I +YP   NV  V Y +G +YA M   +P + +       Y  R +  Y NS Y+ 
Sbjct: 244 GTKWIKKYPTDANVPEVLYYLGNAYADM--RIPQEAK------YYFDRTISEYPNSRYMP 295

Query: 177 GARFYVTVGRN 187
            A+  +    N
Sbjct: 296 LAKMALAKNFN 306


>gi|299135640|ref|ZP_07028824.1| outer membrane assembly lipoprotein YfiO [Acidobacterium sp.
           MP5ACTX8]
 gi|298601764|gb|EFI57918.1| outer membrane assembly lipoprotein YfiO [Acidobacterium sp.
           MP5ACTX8]
          Length = 611

 Score = 35.4 bits (80), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 29/53 (54%)

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
           +A +E E+G +Y     + A I R+Q V+  Y    H ++A+  L +AY A A
Sbjct: 252 MATREAELGAFYASHENWAATIARYQTVIDQYPQYSHMDDALIGLGDAYAAQA 304


>gi|302038038|ref|YP_003798360.1| hypothetical protein NIDE2729 [Candidatus Nitrospira defluvii]
 gi|300606102|emb|CBK42435.1| protein of unknown function [Candidatus Nitrospira defluvii]
          Length = 489

 Score = 35.4 bits (80), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 28/52 (53%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
           A  SL   A   +S G+Y  A  L E Y+T YP+S+     ++ +G +Y QM
Sbjct: 29  AETSLWYQASTAFSDGRYSAAIHLYERYLTTYPKSRRALEAHWDLGQAYEQM 80


>gi|42522407|ref|NP_967787.1| adventurous gliding motility protein U [Bdellovibrio bacteriovorus
           HD100]
 gi|39574939|emb|CAE78780.1| adventurous gliding motility protein U [Bdellovibrio bacteriovorus
           HD100]
          Length = 1066

 Score = 35.4 bits (80), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 72/170 (42%), Gaps = 13/170 (7%)

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
           S+AYE +    R+FP +  A         + Y  GKY +A+   +  +   P+SK     
Sbjct: 474 SQAYEGYQLYLREFPDSATAADMHFYFGELLYDMGKYDEASMQYKWVVDNAPQSK----- 528

Query: 134 YYLVGMSYAQMI----RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
               G S   +I    R +P DQ   K +      +        ++K  ++YV    +  
Sbjct: 529 --FYGKSAQNLILSVERSIPSDQEMQKRVGNSTDPVPLEPKVDRFIKAGQWYVEKFPSSE 586

Query: 190 AAKEVE--IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
            A E++  +GR Y +   +  A   F+ ++  + + ++AE +   L++ Y
Sbjct: 587 KAVEIKFRMGRLYYQSNHFDQATAHFRDIVKQHPNTKYAEYSANLLLDIY 636


>gi|265754620|ref|ZP_06089672.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|263234734|gb|EEZ20302.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 967

 Score = 35.4 bits (80), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 68/180 (37%), Gaps = 29/180 (16%)

Query: 80  FNQCSRDFPFA-----GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
           F Q  +D+  A      +   SL   AFV+     Y          I+ YPES+ +D   
Sbjct: 526 FEQARQDYARAVEIDPSLGDYSLYQEAFVRGLQRDYNGKVQTLNRLISDYPESQYMDDAL 585

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYM-SRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
           Y  G ++ QM  +     R   L+ ++  S +  R  N                      
Sbjct: 586 YEQGRAFVQMEDNANAIARFNILVKKFPESSVARRAAN---------------------- 623

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            EIG  Y +  +Y  AI  ++ V+A+Y  +E A  A   L   Y+ L  +DE     S I
Sbjct: 624 -EIGLLYYQDDKYPEAIQAYKQVIASYPGSEEARLAQRDLKSIYIDLNKVDEYANFASTI 682


>gi|88810550|ref|ZP_01125807.1| hypothetical protein NB231_15758 [Nitrococcus mobilis Nb-231]
 gi|88792180|gb|EAR23290.1| hypothetical protein NB231_15758 [Nitrococcus mobilis Nb-231]
          Length = 275

 Score = 35.4 bits (80), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 18/58 (31%), Positives = 30/58 (51%)

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
           E++F +A + F +   DFP +G    + L   F+Q+  GK  +A     + I +YP S
Sbjct: 200 ERHFDQAMQQFQKVLDDFPHSGKRPGAQLKIGFIQHEQGKLDRARKTLGKVIQRYPNS 257


>gi|154491758|ref|ZP_02031384.1| hypothetical protein PARMER_01374 [Parabacteroides merdae ATCC
           43184]
 gi|154087999|gb|EDN87044.1| hypothetical protein PARMER_01374 [Parabacteroides merdae ATCC
           43184]
          Length = 999

 Score = 35.4 bits (80), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 22/144 (15%)

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           F+Q    KY++    GEE ++ YP+SKN   +Y +VG SY  +       ++A +++ +Y
Sbjct: 218 FIQ---SKYEKVVKEGEELLSLYPDSKNNSEMYRIVGDSYYHLGD----QEKAIRMLSKY 270

Query: 162 MSRIVERYTNSPYVKGARFYV-------------TVGRNQLAAKE--VEIGRYYLKRGEY 206
           +S       +  Y+ G  ++              TV +N    +   + +G+ YLK G+ 
Sbjct: 271 VSSTENPLRSDLYILGVCYFNKGNYSNTVNALSRTVRQNDELTQNAYLYLGQSYLKLGDK 330

Query: 207 VAAIPRFQLVLANYSDAEHAEEAM 230
             A   F+    +  D +  E AM
Sbjct: 331 NNARMAFEAAATSSFDKQIKEVAM 354


Searching..................................................done


Results from round 2




>gi|254781174|ref|YP_003065587.1| outer membrane assembly lipoprotein YfiO [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040851|gb|ACT57647.1| outer membrane assembly lipoprotein YfiO [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 271

 Score =  299 bits (766), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 271/271 (100%), Positives = 271/271 (100%)

Query: 1   MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
           MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV
Sbjct: 1   MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY
Sbjct: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF
Sbjct: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
           YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL
Sbjct: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240

Query: 241 ALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           ALMDEAREVVSLIQERYPQGYWARYVETLVK
Sbjct: 241 ALMDEAREVVSLIQERYPQGYWARYVETLVK 271


>gi|299131916|ref|ZP_07025111.1| outer membrane assembly lipoprotein YfiO [Afipia sp. 1NLS2]
 gi|298592053|gb|EFI52253.1| outer membrane assembly lipoprotein YfiO [Afipia sp. 1NLS2]
          Length = 314

 Score =  297 bits (761), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 84/268 (31%), Positives = 134/268 (50%), Gaps = 12/268 (4%)

Query: 5   LGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKA 64
           LGR +C           FA+ +    A     G      +    D     +   ++Y + 
Sbjct: 34  LGRQLC-----------FAMGVIVLAAPLGGCGTGNLWDKFFAKDETFVDQPADKLYNEG 82

Query: 65  VLFLKEQN-FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           +  L E+N    A + F +  R  P++  ARKSLLMSA+  Y +G Y +  +    YI+ 
Sbjct: 83  LFLLNEKNDRKGAIKKFEEVDRQHPYSDWARKSLLMSAYASYQSGDYDECIANANRYISL 142

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
           +P S +  Y  YLV +S    I DV  DQ  T+  +  +  ++ +Y NS Y   A+  + 
Sbjct: 143 HPGSPDAAYAQYLVAVSNYDQIPDVSRDQGRTEKAIAALEEVIRKYPNSEYATTAKKKIE 202

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
             R+QLA +E+ IGRYY+ + +Y  AI RF++V+  Y    H EEA+ARL EAY+A+ ++
Sbjct: 203 GARDQLAGREMTIGRYYMDKRDYTGAINRFKVVVTQYQTTRHVEEALARLTEAYMAIGVV 262

Query: 244 DEAREVVSLIQERYPQGYWARYVETLVK 271
            EA+   +++   +P   W +    LVK
Sbjct: 263 SEAQTAAAVLGHNFPDSRWYKDAYNLVK 290


>gi|260462098|ref|ZP_05810342.1| outer membrane assembly lipoprotein YfiO [Mesorhizobium
           opportunistum WSM2075]
 gi|259031958|gb|EEW33225.1| outer membrane assembly lipoprotein YfiO [Mesorhizobium
           opportunistum WSM2075]
          Length = 362

 Score =  295 bits (755), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 84/253 (33%), Positives = 131/253 (51%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           L    L +   +   FL               V        +Y + +  L      +A +
Sbjct: 86  LRSVFLALSVVVPSLFLSACMSSEKDIDLSTYVDQTEPADVLYNQGLANLNAGRLDEASK 145

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            F+   R  P++  ARKS++M AF  Y  G Y +A S  + Y+  YP + +  Y  Y++G
Sbjct: 146 KFDAVDRQHPYSEWARKSMVMGAFADYRKGSYDEAISSAKRYLALYPSTDDAPYAQYIIG 205

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           +SY + I+DV  DQ+  +  LQ M  +V R+  S YV  A+  +    +QLA KE++IGR
Sbjct: 206 LSYYRQIKDVTQDQKEARQTLQTMQDLVTRWPTSEYVDDAKEKIRFANDQLAGKEMQIGR 265

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           YYL+R EY+AA+ RF+ V+ NYS+  H EEA+ARL E+Y A+ L  EA+   +++   YP
Sbjct: 266 YYLERREYIAAVKRFRTVVENYSNTRHVEEALARLTESYYAMGLTSEAQTAAAVLGTNYP 325

Query: 259 QGYWARYVETLVK 271
              W +    L++
Sbjct: 326 DSPWYKDSYKLLQ 338


>gi|83592277|ref|YP_426029.1| competence lipoprotein ComL [Rhodospirillum rubrum ATCC 11170]
 gi|83575191|gb|ABC21742.1| competence lipoprotein ComL, putative [Rhodospirillum rubrum ATCC
           11170]
          Length = 292

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 73/251 (29%), Positives = 129/251 (51%), Gaps = 5/251 (1%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           ++     F       L     +     Y++     R   E+Y +AV  L   +++ A + 
Sbjct: 19  FRALAAAFLIGGALALSACSSKKDEPEYVE-----RPVEELYNEAVDLLNTSSYALAAKA 73

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
           F++  R  P++  A K+ +MSA+  Y    Y  A      +I  +P ++++ Y YYL G+
Sbjct: 74  FDEVERQHPYSSWATKAQIMSAYALYENEAYDDAVVAINRFIELHPGNRDIAYAYYLRGL 133

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
            Y + I DV  DQ+ T+  +  +  +V R+ +SPY + AR  + + R+ +A KE+ +GR+
Sbjct: 134 CYYEQISDVRRDQQITRQAMSNLRDVVTRFPDSPYARDARLKIDLARDHIAGKEMSVGRF 193

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           YLKR +++AA+ RF++V+  Y    H  EA+ R+VE    L L DEA+ V +++   +P 
Sbjct: 194 YLKRQDFLAALNRFRVVVEQYDQTTHVPEALYRMVEINTLLGLPDEAKRVAAVLGHNFPG 253

Query: 260 GYWARYVETLV 270
             W      L+
Sbjct: 254 SDWYGDAYRLI 264


>gi|225627872|ref|ZP_03785909.1| outer membrane assembly lipoprotein YfiO [Brucella ceti str. Cudo]
 gi|237815822|ref|ZP_04594819.1| outer membrane assembly lipoprotein YfiO [Brucella abortus str.
           2308 A]
 gi|225617877|gb|EEH14922.1| outer membrane assembly lipoprotein YfiO [Brucella ceti str. Cudo]
 gi|237789120|gb|EEP63331.1| outer membrane assembly lipoprotein YfiO [Brucella abortus str.
           2308 A]
          Length = 323

 Score =  293 bits (750), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 90/253 (35%), Positives = 139/253 (54%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K AL       +  L G   ++        V  +    ++Y + +  L      +A +
Sbjct: 45  VTKTALLSGTIAVLIPLAGCASKNDDIDLTKYVETIDPADKLYNEGLANLDAGRLDEAAK 104

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            F    R  P+   ARK+L+M+AF  Y  G Y++A S+ + Y T YP S    Y YY++G
Sbjct: 105 KFAAIDRQHPYTEWARKALVMAAFTNYRKGNYEEAISMAKRYNTLYPTSPESAYAYYIIG 164

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           +SY + I DV  DQ A++  +  M  +++R+ NS Y   A+  + V R+QLA KE++IGR
Sbjct: 165 LSYFRQIPDVTRDQAASRRAIAAMQEVIDRFPNSEYTDDAKTKIRVARDQLAGKEMQIGR 224

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           YYL+R EY+AAI RF+ V+  YS+    EEA+ARLVEAY AL L  EA+   S++ + +P
Sbjct: 225 YYLERKEYLAAIKRFRGVVEEYSNTRQVEEALARLVEAYYALGLTSEAQMAASVLGKNFP 284

Query: 259 QGYWARYVETLVK 271
              W +    L++
Sbjct: 285 DSQWYKDSYKLLQ 297


>gi|17986870|ref|NP_539504.1| COML, competence lipoprotein [Brucella melitensis bv. 1 str. 16M]
 gi|17982509|gb|AAL51768.1| coml, competence lipoprotein [Brucella melitensis bv. 1 str. 16M]
          Length = 309

 Score =  292 bits (747), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 90/253 (35%), Positives = 139/253 (54%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K AL       +  L G   ++        V  +    ++Y + +  L      +A +
Sbjct: 31  VTKTALLSGTIAVLIPLAGCASKNDDIDLTKYVETIDPADKLYNEGLANLDAGRLDEAAK 90

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            F    R  P+   ARK+L+M+AF  Y  G Y++A S+ + Y T YP S    Y YY++G
Sbjct: 91  KFAAIDRQHPYTEWARKALVMAAFTNYRKGNYEEAISMAKRYNTLYPTSPESAYAYYIIG 150

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           +SY + I DV  DQ A++  +  M  +++R+ NS Y   A+  + V R+QLA KE++IGR
Sbjct: 151 LSYFRQIPDVTRDQAASRRAIAAMQEVIDRFPNSEYTDDAKTKIRVARDQLAGKEMQIGR 210

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           YYL+R EY+AAI RF+ V+  YS+    EEA+ARLVEAY AL L  EA+   S++ + +P
Sbjct: 211 YYLERKEYLAAIKRFRGVVEEYSNTRQVEEALARLVEAYYALGLTSEAQMAASVLGKNFP 270

Query: 259 QGYWARYVETLVK 271
              W +    L++
Sbjct: 271 DSQWYKDSYKLLQ 283


>gi|92116844|ref|YP_576573.1| putative lipoprotein [Nitrobacter hamburgensis X14]
 gi|91799738|gb|ABE62113.1| putative lipoprotein [Nitrobacter hamburgensis X14]
          Length = 325

 Score =  292 bits (747), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 79/256 (30%), Positives = 128/256 (50%), Gaps = 4/256 (1%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDV---RYQREVYEKAVLFLK-EQNFSK 75
            K  L +   I    L G    +  D +L             ++Y + +  +  +++   
Sbjct: 46  RKLRLVVGLVILGTTLSGCGTGALWDKFLAKDEQTFSDEPADKLYNEGLFLMNNQRDLKA 105

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A + F++  R+ P++  ARKSLLMSA+  Y AG Y         Y+T +P S +  Y  Y
Sbjct: 106 ATKKFDEVDREHPYSEWARKSLLMSAYASYQAGDYDTCIGSASRYVTLHPGSPDAAYAQY 165

Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           L+  S    I D+  DQ  T+  +  +  ++ +Y  S Y   A+  +   R+QLA KE+ 
Sbjct: 166 LIAASNYDQIPDISRDQARTEKAMASLEEVIRKYPTSEYAGEAKKKLQGARDQLAGKEMA 225

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           IGRYY++R +Y  AI RF+ V+  Y    H EEA+ARL EAY+A+ ++ EA+   +++  
Sbjct: 226 IGRYYMERRDYTGAINRFKTVVTRYQTTRHVEEALARLTEAYMAIGIVGEAQTAAAVLGH 285

Query: 256 RYPQGYWARYVETLVK 271
            +P   W +    LVK
Sbjct: 286 NFPNSRWYKDAYNLVK 301


>gi|23502293|ref|NP_698420.1| competence protein ComL [Brucella suis 1330]
 gi|62290315|ref|YP_222108.1| competence protein ComL [Brucella abortus bv. 1 str. 9-941]
 gi|82700239|ref|YP_414813.1| TPR repeat-containing protein [Brucella melitensis biovar Abortus
           2308]
 gi|161619370|ref|YP_001593257.1| hypothetical protein BCAN_A1455 [Brucella canis ATCC 23365]
 gi|163843677|ref|YP_001628081.1| hypothetical protein BSUIS_A1473 [Brucella suis ATCC 23445]
 gi|189024549|ref|YP_001935317.1| TPR repeat-containing protein [Brucella abortus S19]
 gi|225852904|ref|YP_002733137.1| outer membrane assembly lipoprotein YfiO [Brucella melitensis ATCC
           23457]
 gi|254689617|ref|ZP_05152871.1| COML, competence lipoprotein [Brucella abortus bv. 6 str. 870]
 gi|254694107|ref|ZP_05155935.1| COML, competence lipoprotein [Brucella abortus bv. 3 str. Tulya]
 gi|254697759|ref|ZP_05159587.1| COML, competence lipoprotein [Brucella abortus bv. 2 str. 86/8/59]
 gi|254702144|ref|ZP_05163972.1| COML, competence lipoprotein [Brucella suis bv. 5 str. 513]
 gi|254704680|ref|ZP_05166508.1| COML, competence lipoprotein [Brucella suis bv. 3 str. 686]
 gi|254708095|ref|ZP_05169923.1| COML, competence lipoprotein [Brucella pinnipedialis M163/99/10]
 gi|254710464|ref|ZP_05172275.1| COML, competence lipoprotein [Brucella pinnipedialis B2/94]
 gi|254714457|ref|ZP_05176268.1| COML, competence lipoprotein [Brucella ceti M644/93/1]
 gi|254717355|ref|ZP_05179166.1| COML, competence lipoprotein [Brucella ceti M13/05/1]
 gi|254730648|ref|ZP_05189226.1| COML, competence lipoprotein [Brucella abortus bv. 4 str. 292]
 gi|256031958|ref|ZP_05445572.1| COML, competence lipoprotein [Brucella pinnipedialis M292/94/1]
 gi|256045053|ref|ZP_05447954.1| COML, competence lipoprotein [Brucella melitensis bv. 1 str. Rev.1]
 gi|256061480|ref|ZP_05451624.1| COML, competence lipoprotein [Brucella neotomae 5K33]
 gi|256113976|ref|ZP_05454759.1| COML, competence lipoprotein [Brucella melitensis bv. 3 str. Ether]
 gi|256160157|ref|ZP_05457851.1| COML, competence lipoprotein [Brucella ceti M490/95/1]
 gi|256255363|ref|ZP_05460899.1| COML, competence lipoprotein [Brucella ceti B1/94]
 gi|256263614|ref|ZP_05466146.1| TPR repeat-containing protein [Brucella melitensis bv. 2 str. 63/9]
 gi|256369838|ref|YP_003107349.1| competence protein ComL [Brucella microti CCM 4915]
 gi|260169095|ref|ZP_05755906.1| COML, competence lipoprotein [Brucella sp. F5/99]
 gi|260546858|ref|ZP_05822597.1| TPR repeat-containing protein [Brucella abortus NCTC 8038]
 gi|260565348|ref|ZP_05835832.1| TPR repeat-containing protein [Brucella melitensis bv. 1 str. 16M]
 gi|260566072|ref|ZP_05836542.1| TPR repeat-containing protein [Brucella suis bv. 4 str. 40]
 gi|260755144|ref|ZP_05867492.1| competence protein ComL [Brucella abortus bv. 6 str. 870]
 gi|260758363|ref|ZP_05870711.1| competence protein ComL [Brucella abortus bv. 4 str. 292]
 gi|260762189|ref|ZP_05874532.1| competence protein ComL [Brucella abortus bv. 2 str. 86/8/59]
 gi|261214405|ref|ZP_05928686.1| competence protein ComL [Brucella abortus bv. 3 str. Tulya]
 gi|261219185|ref|ZP_05933466.1| competence protein ComL [Brucella ceti M13/05/1]
 gi|261222564|ref|ZP_05936845.1| competence protein ComL [Brucella ceti B1/94]
 gi|261315597|ref|ZP_05954794.1| competence protein ComL [Brucella pinnipedialis M163/99/10]
 gi|261318035|ref|ZP_05957232.1| competence protein ComL [Brucella pinnipedialis B2/94]
 gi|261322246|ref|ZP_05961443.1| competence protein ComL [Brucella ceti M644/93/1]
 gi|261325486|ref|ZP_05964683.1| competence protein ComL [Brucella neotomae 5K33]
 gi|261752713|ref|ZP_05996422.1| competence protein ComL [Brucella suis bv. 5 str. 513]
 gi|261755373|ref|ZP_05999082.1| competence protein ComL [Brucella suis bv. 3 str. 686]
 gi|261758600|ref|ZP_06002309.1| TPR repeat-containing protein [Brucella sp. F5/99]
 gi|265989066|ref|ZP_06101623.1| competence protein ComL [Brucella pinnipedialis M292/94/1]
 gi|265991479|ref|ZP_06104036.1| competence protein ComL [Brucella melitensis bv. 1 str. Rev.1]
 gi|265995317|ref|ZP_06107874.1| competence protein ComL [Brucella melitensis bv. 3 str. Ether]
 gi|265998529|ref|ZP_06111086.1| competence protein ComL [Brucella ceti M490/95/1]
 gi|294852749|ref|ZP_06793422.1| UPF0169 lipoprotein [Brucella sp. NVSL 07-0026]
 gi|297248702|ref|ZP_06932420.1| lipoprotein [Brucella abortus bv. 5 str. B3196]
 gi|23348269|gb|AAN30335.1| competence protein ComL, putative [Brucella suis 1330]
 gi|62196447|gb|AAX74747.1| ComL, hypothetical competence protein [Brucella abortus bv. 1 str.
           9-941]
 gi|82616340|emb|CAJ11397.1| TPR repeat:Protein of unknown function UPF0169 [Brucella melitensis
           biovar Abortus 2308]
 gi|161336181|gb|ABX62486.1| Hypothetical protein BCAN_A1455 [Brucella canis ATCC 23365]
 gi|163674400|gb|ABY38511.1| Hypothetical protein BSUIS_A1473 [Brucella suis ATCC 23445]
 gi|189020121|gb|ACD72843.1| TPR repeat-containing protein [Brucella abortus S19]
 gi|225641269|gb|ACO01183.1| outer membrane assembly lipoprotein YfiO [Brucella melitensis ATCC
           23457]
 gi|256000001|gb|ACU48400.1| competence protein ComL [Brucella microti CCM 4915]
 gi|260095908|gb|EEW79785.1| TPR repeat-containing protein [Brucella abortus NCTC 8038]
 gi|260151416|gb|EEW86510.1| TPR repeat-containing protein [Brucella melitensis bv. 1 str. 16M]
 gi|260155590|gb|EEW90670.1| TPR repeat-containing protein [Brucella suis bv. 4 str. 40]
 gi|260668681|gb|EEX55621.1| competence protein ComL [Brucella abortus bv. 4 str. 292]
 gi|260672621|gb|EEX59442.1| competence protein ComL [Brucella abortus bv. 2 str. 86/8/59]
 gi|260675252|gb|EEX62073.1| competence protein ComL [Brucella abortus bv. 6 str. 870]
 gi|260916012|gb|EEX82873.1| competence protein ComL [Brucella abortus bv. 3 str. Tulya]
 gi|260921148|gb|EEX87801.1| competence protein ComL [Brucella ceti B1/94]
 gi|260924274|gb|EEX90842.1| competence protein ComL [Brucella ceti M13/05/1]
 gi|261294936|gb|EEX98432.1| competence protein ComL [Brucella ceti M644/93/1]
 gi|261297258|gb|EEY00755.1| competence protein ComL [Brucella pinnipedialis B2/94]
 gi|261301466|gb|EEY04963.1| competence protein ComL [Brucella neotomae 5K33]
 gi|261304623|gb|EEY08120.1| competence protein ComL [Brucella pinnipedialis M163/99/10]
 gi|261738584|gb|EEY26580.1| TPR repeat-containing protein [Brucella sp. F5/99]
 gi|261742466|gb|EEY30392.1| competence protein ComL [Brucella suis bv. 5 str. 513]
 gi|261745126|gb|EEY33052.1| competence protein ComL [Brucella suis bv. 3 str. 686]
 gi|262553153|gb|EEZ08987.1| competence protein ComL [Brucella ceti M490/95/1]
 gi|262766430|gb|EEZ12219.1| competence protein ComL [Brucella melitensis bv. 3 str. Ether]
 gi|263002263|gb|EEZ14838.1| competence protein ComL [Brucella melitensis bv. 1 str. Rev.1]
 gi|263093666|gb|EEZ17671.1| TPR repeat-containing protein [Brucella melitensis bv. 2 str. 63/9]
 gi|264661263|gb|EEZ31524.1| competence protein ComL [Brucella pinnipedialis M292/94/1]
 gi|294821338|gb|EFG38337.1| UPF0169 lipoprotein [Brucella sp. NVSL 07-0026]
 gi|297175871|gb|EFH35218.1| lipoprotein [Brucella abortus bv. 5 str. B3196]
 gi|326409446|gb|ADZ66511.1| TPR repeat-containing protein [Brucella melitensis M28]
 gi|326539152|gb|ADZ87367.1| outer membrane assembly lipoprotein YfiO [Brucella melitensis
           M5-90]
          Length = 287

 Score =  291 bits (746), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 90/253 (35%), Positives = 139/253 (54%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K AL       +  L G   ++        V  +    ++Y + +  L      +A +
Sbjct: 9   VTKTALLSGTIAVLIPLAGCASKNDDIDLTKYVETIDPADKLYNEGLANLDAGRLDEAAK 68

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            F    R  P+   ARK+L+M+AF  Y  G Y++A S+ + Y T YP S    Y YY++G
Sbjct: 69  KFAAIDRQHPYTEWARKALVMAAFTNYRKGNYEEAISMAKRYNTLYPTSPESAYAYYIIG 128

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           +SY + I DV  DQ A++  +  M  +++R+ NS Y   A+  + V R+QLA KE++IGR
Sbjct: 129 LSYFRQIPDVTRDQAASRRAIAAMQEVIDRFPNSEYTDDAKTKIRVARDQLAGKEMQIGR 188

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           YYL+R EY+AAI RF+ V+  YS+    EEA+ARLVEAY AL L  EA+   S++ + +P
Sbjct: 189 YYLERKEYLAAIKRFRGVVEEYSNTRQVEEALARLVEAYYALGLTSEAQMAASVLGKNFP 248

Query: 259 QGYWARYVETLVK 271
              W +    L++
Sbjct: 249 DSQWYKDSYKLLQ 261


>gi|86749129|ref|YP_485625.1| putative lipoprotein [Rhodopseudomonas palustris HaA2]
 gi|86572157|gb|ABD06714.1| putative lipoprotein [Rhodopseudomonas palustris HaA2]
          Length = 301

 Score =  291 bits (746), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 77/256 (30%), Positives = 129/256 (50%), Gaps = 4/256 (1%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDV---RYQREVYEKAVLFLKE-QNFSK 75
               L     +    L G    +  D +L    D        ++Y + +  + + ++   
Sbjct: 22  RSLPLVASLMLLALPLGGCGTGAIWDKFLAKDEDKFNDEPADKLYNEGLYLMNKEKDLKG 81

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A + F +  R  P++  ARKSLLMSA+  Y AG Y         Y+T +P S +  Y  Y
Sbjct: 82  ASKKFEEVDRQHPYSDWARKSLLMSAYSFYQAGDYDSCIGSATRYVTLHPGSPDAAYAQY 141

Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           L+  S+   I D+  DQ  T+  +  +  ++ +Y  S Y   A+  +   R+QLA KE++
Sbjct: 142 LIAASHYDQIPDISRDQGRTEKAIAALEEVIRKYPTSEYANQAKQKLEGARDQLAGKEMD 201

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           +GR+Y+++ +Y AAI RF+ V+  Y    H EEA+ARL EAY+A+ ++ EA+   +++  
Sbjct: 202 VGRFYMEKRDYAAAINRFKTVVTRYQTTRHVEEALARLTEAYMAIGIVGEAQTAAAVLGH 261

Query: 256 RYPQGYWARYVETLVK 271
            +P   W +   TLVK
Sbjct: 262 NFPDSRWYKDAYTLVK 277


>gi|148558858|ref|YP_001259314.1| putative competence protein ComL [Brucella ovis ATCC 25840]
 gi|148370115|gb|ABQ60094.1| putative competence protein ComL [Brucella ovis ATCC 25840]
          Length = 287

 Score =  290 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 90/253 (35%), Positives = 138/253 (54%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K AL       +  L G   ++        V  +    ++Y + +  L      +A +
Sbjct: 9   VTKTALLSGTIAVLIPLAGCASKNDDIDLTKYVETINPADKLYNEGLANLDAGRLDEAAK 68

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            F    R  P+   ARK+L+M+AF  Y  G Y++A S+ + Y T YP S    Y YY++G
Sbjct: 69  KFAAIDRQHPYTEWARKALVMAAFTNYRKGNYEEAISMAKRYNTLYPTSPESAYAYYIIG 128

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           +SY   I DV  DQ A++  +  M  +++R+ NS Y   A+  + V R+QLA KE++IGR
Sbjct: 129 LSYFHQIPDVTRDQAASRRAIAAMQEVIDRFPNSEYTDDAKTKIRVARDQLAGKEMQIGR 188

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           YYL+R EY+AAI RF+ V+  YS+    EEA+ARLVEAY AL L  EA+   S++ + +P
Sbjct: 189 YYLERKEYLAAIKRFRGVVEEYSNTRQVEEALARLVEAYYALGLTSEAQMAASVLGKNFP 248

Query: 259 QGYWARYVETLVK 271
              W +    L++
Sbjct: 249 DSQWYKDSYKLLQ 261


>gi|254719454|ref|ZP_05181265.1| COML, competence lipoprotein [Brucella sp. 83/13]
 gi|265984459|ref|ZP_06097194.1| competence protein ComL [Brucella sp. 83/13]
 gi|306839231|ref|ZP_07472048.1| outer membrane assembly lipoprotein YfiO [Brucella sp. NF 2653]
 gi|306843231|ref|ZP_07475841.1| outer membrane assembly lipoprotein YfiO [Brucella sp. BO2]
 gi|306844321|ref|ZP_07476913.1| outer membrane assembly lipoprotein YfiO [Brucella sp. BO1]
 gi|264663051|gb|EEZ33312.1| competence protein ComL [Brucella sp. 83/13]
 gi|306275393|gb|EFM57134.1| outer membrane assembly lipoprotein YfiO [Brucella sp. BO1]
 gi|306286554|gb|EFM58133.1| outer membrane assembly lipoprotein YfiO [Brucella sp. BO2]
 gi|306405778|gb|EFM62040.1| outer membrane assembly lipoprotein YfiO [Brucella sp. NF 2653]
          Length = 287

 Score =  290 bits (743), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 90/253 (35%), Positives = 139/253 (54%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K AL       +  L G   ++        V  +    ++Y + +  L      +A +
Sbjct: 9   VTKTALLSGAIAVLIPLAGCASKNDDIDLTKYVETIDPADKLYNEGLANLDAGRLDEAAK 68

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            F    R  P+   ARK+L+M+AF  Y  G Y++A S+ + Y T YP S    Y YY++G
Sbjct: 69  KFAAIDRQHPYTEWARKALVMAAFTNYRKGNYEEAISMAKRYNTLYPTSPESAYAYYIIG 128

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           +SY + I DV  DQ A++  +  M  +++R+ NS Y   A+  + V R+QLA KE++IGR
Sbjct: 129 LSYFRQIPDVTRDQAASRRAIAAMQEVIDRFPNSEYTDDAKTKIRVARDQLAGKEMQIGR 188

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           YYL+R EY+AAI RF+ V+  YS+    EEA+ARLVEAY AL L  EA+   S++ + +P
Sbjct: 189 YYLERKEYLAAIKRFRGVVEEYSNTRQVEEALARLVEAYYALGLTSEAQMAASVLGKNFP 248

Query: 259 QGYWARYVETLVK 271
              W +    L++
Sbjct: 249 DSQWYKDSYKLLQ 261


>gi|316933197|ref|YP_004108179.1| outer membrane assembly lipoprotein YfiO [Rhodopseudomonas
           palustris DX-1]
 gi|315600911|gb|ADU43446.1| outer membrane assembly lipoprotein YfiO [Rhodopseudomonas
           palustris DX-1]
          Length = 302

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 75/254 (29%), Positives = 128/254 (50%), Gaps = 4/254 (1%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL-KEQNFSKAY 77
           +    L +   +  C          + +  D         ++Y + +  + ++++   A 
Sbjct: 28  MIVGVLALSLPLGGCGTGALW---DKFLAKDDKMVDEPADKLYNEGLYLMNQDKDTKGAA 84

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           + F +  R  P++  ARKSLLMSA+  Y AG Y         Y+T +P S +  Y  YL+
Sbjct: 85  KKFEEVDRQHPYSDWARKSLLMSAYAYYQAGDYDSCIGAATRYVTLHPGSPDAAYAQYLI 144

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             S+   I D+  DQ  T+  +  +  ++ +Y  S Y   A+  +   R+QLA KE+++G
Sbjct: 145 AASHYDQIPDISRDQGRTEKAIASLEEVIRKYPTSEYANSAKQKLEGARDQLAGKEMDVG 204

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           RYY+ + +Y AAI RF+ V+  Y    H EEA+ARL EAY+A+ ++ EA+   +++   +
Sbjct: 205 RYYMSKRDYAAAINRFKTVVTRYQTTRHVEEALARLTEAYMAIGIVGEAQTAAAVLGHNF 264

Query: 258 PQGYWARYVETLVK 271
           P   W +   TLVK
Sbjct: 265 PDSKWYKDAYTLVK 278


>gi|297717818|gb|ADI50052.1| DNA uptake lipoprotein [Candidatus Odyssella thessalonicensis L13]
          Length = 278

 Score =  289 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 68/228 (29%), Positives = 123/228 (53%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
           S     +         ++Y  A   +   +++ A + F +  R  P++  + K+ LMSA+
Sbjct: 19  SCSEKDEEALAQMPVEQLYNMAKDQMDSGSYNTAAKTFAEVERQHPYSEWSLKAQLMSAY 78

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y A KY +A      +I  +P  +++ Y YY+VG+SY + I  V  DQ  T+   +  
Sbjct: 79  CYYEAKKYTEAIEGYNVFIQLHPGHEHIPYAYYMVGLSYYEQIPTVHRDQTVTEKAQEAF 138

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
             ++ R+ +SPY K A+F + + R+ LA KE+++GRYYL++  Y+AA+ RF+ V+  +  
Sbjct: 139 QEVINRFPDSPYAKDAKFKMDLLRDHLAGKEMDVGRYYLRQRSYLAAVNRFKEVVDRFQT 198

Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
             H  EA+ R+VE Y+AL L+++A +  +++   +P   W      L+
Sbjct: 199 TSHVPEALHRMVECYLALGLVEQAYQTAAILGHNFPGSLWYADTYALM 246


>gi|239832301|ref|ZP_04680630.1| outer membrane assembly lipoprotein YfiO [Ochrobactrum intermedium
           LMG 3301]
 gi|239824568|gb|EEQ96136.1| outer membrane assembly lipoprotein YfiO [Ochrobactrum intermedium
           LMG 3301]
          Length = 287

 Score =  289 bits (740), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 90/253 (35%), Positives = 137/253 (54%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K AL       +  L G   +         V  +    ++Y + +  L      +A +
Sbjct: 9   VTKTALLTGAIAVLIPLAGCASKDDDIDLTKYVETIDPADKLYNEGLANLDAGRLDEAAK 68

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            F    R  P+   ARKSL+M+AF  Y  G Y++A S+ + Y T YP S    Y YY++G
Sbjct: 69  KFAAVDRQHPYTEWARKSLVMAAFTNYRKGNYEEAISMAKRYNTLYPTSPESAYAYYIIG 128

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           +SY + I DV  DQ A++  +  M  +V+R+ +S Y   A+  +   R+QLA KE+++GR
Sbjct: 129 LSYFRQIPDVTRDQAASRRAIAAMQEVVDRFPDSEYTDDAKAKIRFARDQLAGKEMQVGR 188

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           YYL+R EY+AAI RF+ V+  YS+    EEA+ARLVEAY AL L  EA+   S++ + YP
Sbjct: 189 YYLERKEYLAAIKRFRGVVEEYSNTRQVEEALARLVEAYYALGLTSEAQMAASVLGKNYP 248

Query: 259 QGYWARYVETLVK 271
              W +    L++
Sbjct: 249 DSQWYKDSYKLLQ 261


>gi|182677692|ref|YP_001831838.1| DNA uptake lipoprotein-like protein [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|182633575|gb|ACB94349.1| DNA uptake lipoprotein-like protein [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 391

 Score =  287 bits (736), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 81/259 (31%), Positives = 135/259 (52%), Gaps = 9/259 (3%)

Query: 22  FALTIFFSIAVCFLVGWERQSSR---------DVYLDSVTDVRYQREVYEKAVLFLKEQN 72
           F L++   +A C  +G    S           + Y   V       ++Y + ++ L++++
Sbjct: 22  FLLSVSLPLAACSSMGDFDASKSLNPTNWFKGEKYEAKVIPDVPADDIYNQGLVRLQKKD 81

Query: 73  FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
           +  A + F    + +P++   +K LLMSA+ QY  G Y  A +  + Y T YP + +  Y
Sbjct: 82  YEAAGKKFADLEKQYPYSQWQKKGLLMSAYSQYQNGSYDDAIASAQRYYTLYPNAPDTPY 141

Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
            YYL  MS    I DV  DQ   +       +I E++  S Y + A++ + V R+QLA K
Sbjct: 142 AYYLAAMSNYNQIPDVSRDQERAQKAAVLFQQIAEKFPKSEYGEDAKYKLQVCRDQLAGK 201

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           E+ +GRYYL    Y+AA+ RF+ VLA Y    H+EEA+ RL EAY+AL +++EA+   ++
Sbjct: 202 EMFVGRYYLNNHNYIAAVNRFREVLAKYQTTRHSEEALMRLTEAYLALGIVNEAQTAAAV 261

Query: 253 IQERYPQGYWARYVETLVK 271
           +   +P   W +    L++
Sbjct: 262 LGHNFPDSQWYKDSYALLQ 280


>gi|39936582|ref|NP_948858.1| putative lipoprotein [Rhodopseudomonas palustris CGA009]
 gi|39650438|emb|CAE28961.1| Protein of unknown function UPF0169 [Rhodopseudomonas palustris
           CGA009]
          Length = 302

 Score =  287 bits (736), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 75/250 (30%), Positives = 125/250 (50%), Gaps = 4/250 (1%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL-KEQNFSKAYEYFN 81
            L +   +  C          + +  D         ++Y + +  + ++++   A + F 
Sbjct: 32  LLALSLPLGGCGTGALW---DKFLAKDDKMVDEPADKLYNEGLYLMNQDKDTKGAAKKFE 88

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
           +  R  P++  ARKSLLMSA+  Y AG Y         Y+T +P S +  Y  YL+  S 
Sbjct: 89  EVDRQHPYSDWARKSLLMSAYAYYQAGDYDSCIGSATRYVTLHPGSPDAAYAQYLIAASN 148

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
              I D+  DQ  T+  +  +  ++ +Y  S Y   A+  +   R+QLA KE++IGRYY+
Sbjct: 149 YDQIPDISRDQGRTEKAIAALEEVIRKYPTSEYANSAKQKLEGARDQLAGKEMDIGRYYM 208

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + +Y AAI RF+ V+  Y    H EEA+ARL EAY+A+ ++ EA+   +++   +P   
Sbjct: 209 SKRDYAAAINRFKTVVTRYQTTRHVEEALARLTEAYMAIGIVGEAQTAAAVLGHNFPDSR 268

Query: 262 WARYVETLVK 271
           W +    LVK
Sbjct: 269 WYKDAYNLVK 278


>gi|192292404|ref|YP_001993009.1| outer membrane assembly lipoprotein YfiO [Rhodopseudomonas
           palustris TIE-1]
 gi|192286153|gb|ACF02534.1| outer membrane assembly lipoprotein YfiO [Rhodopseudomonas
           palustris TIE-1]
          Length = 302

 Score =  287 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 75/250 (30%), Positives = 125/250 (50%), Gaps = 4/250 (1%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL-KEQNFSKAYEYFN 81
            L +   +  C          + +  D         ++Y + +  + ++++   A + F 
Sbjct: 32  LLALSLPLGGCGTGALW---DKFLAKDDKMVDEPADKLYNEGLYLMNQDKDTKGAAKKFE 88

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
           +  R  P++  ARKSLLMSA+  Y AG Y         Y+T +P S +  Y  YL+  S 
Sbjct: 89  EVDRQHPYSDWARKSLLMSAYAYYQAGDYDSCIGSATRYVTLHPGSPDAAYAQYLIAASN 148

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
              I D+  DQ  T+  +  +  ++ +Y  S Y   A+  +   R+QLA KE++IGRYY+
Sbjct: 149 YDQIPDISRDQGRTEKAIAALEEVIRKYPTSEYANSAKQKLEGARDQLAGKEMDIGRYYM 208

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + +Y AAI RF+ V+  Y    H EEA+ARL EAY+A+ ++ EA+   +++   +P   
Sbjct: 209 SKRDYAAAINRFKTVVTRYQTTRHVEEALARLTEAYMAIGIVGEAQTAAAVLGHNFPDSR 268

Query: 262 WARYVETLVK 271
           W +    LVK
Sbjct: 269 WYKDAYNLVK 278


>gi|91977850|ref|YP_570509.1| putative lipoprotein [Rhodopseudomonas palustris BisB5]
 gi|91684306|gb|ABE40608.1| putative lipoprotein [Rhodopseudomonas palustris BisB5]
          Length = 301

 Score =  287 bits (735), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 77/256 (30%), Positives = 128/256 (50%), Gaps = 4/256 (1%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDV---RYQREVYEKAVLFLKE-QNFSK 75
               L    ++    L G    +  D +L    D        ++Y + +  + + ++   
Sbjct: 22  RSLPLMASLAMLALPLGGCGTGAIWDKFLAKDEDKFNDEPADKLYNEGLYLMNKEKDLKA 81

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A + F +  R  P++  ARKSLLMSA+  Y AG Y         Y+T +P S +  Y  Y
Sbjct: 82  ASKKFEEVDRQHPYSDWARKSLLMSAYSFYQAGDYDSCIGSATRYVTLHPGSPDAAYAQY 141

Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           L+  S+   I DV  DQ  T+  +  +  ++ +Y  S Y   A+  +   R+QLA KE++
Sbjct: 142 LIAASHYDQIPDVSRDQGRTEKAIAALEEVIRKYPTSEYANQAKQKLEGARDQLAGKEMD 201

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           +GRYY+++ +Y AAI RF+ V+  Y    H EEA+ARL EAY+ + ++ EA+   +++  
Sbjct: 202 VGRYYMQKRDYTAAINRFKTVVTRYQTTRHVEEALARLTEAYMTIGIVGEAQTAAAVLGH 261

Query: 256 RYPQGYWARYVETLVK 271
            +P   W +    LVK
Sbjct: 262 NFPDSRWYKDAYNLVK 277


>gi|154252872|ref|YP_001413696.1| DNA uptake lipoprotein [Parvibaculum lavamentivorans DS-1]
 gi|154156822|gb|ABS64039.1| DNA uptake lipoprotein [Parvibaculum lavamentivorans DS-1]
          Length = 291

 Score =  286 bits (733), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 77/224 (34%), Positives = 128/224 (57%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
             +   + R   ++Y KA+  +   ++  A + F++  R  P++  AR+S+LMSA+  Y 
Sbjct: 45  DDELPYEERPVEQIYNKAMDHMAAGDYIPAAKEFDEVERQHPYSEWARRSMLMSAYAHYK 104

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
             +Y +A    + +I+ +P +K+V Y YYL+G+SY + I DV  DQ+ T+  L     + 
Sbjct: 105 INEYDEAILSAQRFISLHPSNKDVPYAYYLIGLSYYERISDVGRDQKMTENALNSFYELT 164

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
           +R+ +S Y + AR  + +  + LA KE+EIGRYYL R +YVAAI RF++V+  Y    H 
Sbjct: 165 QRFPSSEYSRDARLKIDLTLDHLAGKEMEIGRYYLIRRDYVAAINRFRVVIEKYQTTTHT 224

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
            EA+ RL EAY+AL +  EA+   +++   YP   W      ++
Sbjct: 225 PEALERLTEAYLALGVKTEAQTAAAILGYNYPGSDWYEDSYAML 268


>gi|146342490|ref|YP_001207538.1| TPR repeat-containing protein [Bradyrhizobium sp. ORS278]
 gi|146195296|emb|CAL79321.1| Conserved hypothetical protein; Putative Lipoprotein with
           tetratricopeptide repeat (TPR) domain [Bradyrhizobium
           sp. ORS278]
          Length = 297

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 79/250 (31%), Positives = 131/250 (52%), Gaps = 8/250 (3%)

Query: 25  TIFFSIAVCFLVGWERQ--SSRDVYLDSVTDVRYQREVYEKAVLFLK-EQNFSKAYEYFN 81
            + F +A C   G   +  +  D ++D   D     ++Y + +  L  +++   A + F 
Sbjct: 29  LLAFPLAGCGTGGLWDKFLAKDDTFVDEPAD-----KLYNEGLYMLNEKKDMKGANKKFE 83

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
           +  R  P++  ARKSLLMSA+  Y AG Y         Y+T +P S +  Y  YL+  S+
Sbjct: 84  EVDRQHPYSDWARKSLLMSAYASYQAGDYDGCIGSATRYVTLHPGSPDAAYAQYLIAASH 143

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
              I D+  DQ  T+  +  +  +V +Y NS Y   A+  +   R+QLA KE+++GRYY+
Sbjct: 144 YDQIPDISRDQGRTEKAIAALEEVVRKYPNSEYATNAKAKMEGARDQLAGKEMDVGRYYM 203

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           ++ +Y AAI RF+ V+  Y    H EEA+ RL EAY+ + ++ EA+   +++   +P   
Sbjct: 204 QKRDYTAAINRFKTVVTQYQTTRHVEEALFRLTEAYMTIGIVGEAQTAAAVLGHNFPDSK 263

Query: 262 WARYVETLVK 271
           W +    LVK
Sbjct: 264 WYKDAYNLVK 273


>gi|153009082|ref|YP_001370297.1| competence protein ComL [Ochrobactrum anthropi ATCC 49188]
 gi|151560970|gb|ABS14468.1| ComL, hypothetical competence protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 287

 Score =  285 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 90/253 (35%), Positives = 136/253 (53%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K AL       +  L G   +         V  +    + Y + +  L      +A +
Sbjct: 9   VTKTALLTGAIAVLIPLAGCASKDDDIDLTKYVETIDPADKTYNEGLANLDAGRLDEAAK 68

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            F    R  P+   ARKSL+M+AF  Y  G Y++A S+ + Y T YP S    Y YY++G
Sbjct: 69  KFAAVDRQHPYTEWARKSLVMAAFTNYRKGNYEEAISMAKRYNTLYPTSPESAYAYYIIG 128

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           +SY + I DV  DQ A++  +  M  +V+R+ +S Y   AR  +   R+QLA KE+++GR
Sbjct: 129 LSYFRQIPDVTRDQAASRRAIAAMQEVVDRFPDSEYTDDARAKIRFARDQLAGKEMQVGR 188

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           YYL+R EY+A+I RF+ V+  YS+    EEA+ARLVEAY AL L  EA+   S++ + YP
Sbjct: 189 YYLERKEYLASIKRFRGVVEEYSNTRQVEEALARLVEAYYALGLTSEAQMAASVLGKNYP 248

Query: 259 QGYWARYVETLVK 271
              W +    L++
Sbjct: 249 DSQWYKDSYKLLQ 261


>gi|119897308|ref|YP_932521.1| competence lipoprotein [Azoarcus sp. BH72]
 gi|119669721|emb|CAL93634.1| probable competence lipoprotein precursor [Azoarcus sp. BH72]
          Length = 269

 Score =  285 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 59/247 (23%), Positives = 106/247 (42%), Gaps = 14/247 (5%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
           F  I    L                T     +++Y +A   + E  + +A + F +    
Sbjct: 13  FALIGALLLGACSSLPDEIDE----TSGWNAQKLYAEAKASMTEGGYDRAIKLFEKLEAR 68

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
           +P+   A+++ +  A+  Y +G+   A +  + +I  +P   NVDYVYYL G+       
Sbjct: 69  YPYGRFAQQAQIEVAYAHYKSGEPGLALAAADRFIKLHPNHPNVDYVYYLKGLVNFNEDL 128

Query: 147 DV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
            +            D +  +        +V R+  S Y + +R  +    N LAA +V +
Sbjct: 129 GLLAGISNQDLSERDPKGAREAFDTFRELVTRFPESKYAEDSRQRMQYLVNSLAAHDVHV 188

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            RYY +RG ++AA  R Q  +A Y      EEA+  +V++Y AL L D   +   ++Q+ 
Sbjct: 189 ARYYYRRGAFIAAANRAQTAVATYPGTPATEEALYLMVKSYEALGLKDLQGDAERVLQKN 248

Query: 257 YPQGYWA 263
           +P   + 
Sbjct: 249 FPNSVYY 255


>gi|163794453|ref|ZP_02188424.1| DNA uptake lipoprotein [alpha proteobacterium BAL199]
 gi|159180177|gb|EDP64700.1| DNA uptake lipoprotein [alpha proteobacterium BAL199]
          Length = 286

 Score =  285 bits (729), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 77/224 (34%), Positives = 122/224 (54%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
              ++    R   ++Y +A     +  F KA   F++  R  P++  A ++ LM+A+  Y
Sbjct: 39  TDDETPYVDRPVEQIYNEAYEAALKGEFKKAAPLFDEVERQHPYSIWATQAQLMAAYSLY 98

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
            A KY ++ +  + +I   P + NVDY YYL G+ Y + I DV  DQ+ TK  L+    +
Sbjct: 99  QANKYTESVNALDRFIQLNPSNPNVDYAYYLKGLCYYEQIVDVGRDQKLTKQALESFDEV 158

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           ++R+  S + + AR  + + RN LA KE+ IGR+YL+RG+++AAI RFQ V+  +   + 
Sbjct: 159 IKRFPTSKFARDARLKIDLTRNHLAGKEMAIGRWYLERGQHLAAINRFQKVVEQFDTTDQ 218

Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
             EA+ RL EAY AL L  EA+   S++   YP   W      L
Sbjct: 219 VPEALLRLTEAYTALGLTGEAKRTASVLGYNYPGTEWYEDAYAL 262


>gi|90418186|ref|ZP_01226098.1| putative competence lipoprotein comL [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90337858|gb|EAS51509.1| putative competence lipoprotein comL [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 293

 Score =  285 bits (729), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 88/255 (34%), Positives = 137/255 (53%), Gaps = 1/255 (0%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVY-LDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
           ++ K    +   +A   L G     + DV  L    +      +Y + +  L+     +A
Sbjct: 14  RVAKLTGALALGLASAGLSGCMSSDTSDVEALALAAETDPPDVLYNQGLANLEGGRLGEA 73

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            + F    R  P++  ARK+L+MSAF  Y  G Y  A +  + Y++ YP S+   Y  Y+
Sbjct: 74  TKKFEAIDRQHPYSEWARKALVMSAFASYRGGDYDTAINSSKRYLSLYPGSEEAAYAQYI 133

Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
           +G++Y + I DV  DQ+        M  + E+Y +S Y   AR  + + R+QLA KE+++
Sbjct: 134 MGLAYYRQIPDVTRDQKEAARAAAAMREVFEKYPDSEYADDARAKLRIARDQLAGKEMQV 193

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           GRYYL+R EYVAAI RF+ V+  YSD+ H EEA+ARL EAY A+ L  EA+   S++ + 
Sbjct: 194 GRYYLERREYVAAINRFKNVVDVYSDSRHVEEALARLTEAYYAMGLTREAQAAASVLGQN 253

Query: 257 YPQGYWARYVETLVK 271
           +P   W R    L++
Sbjct: 254 FPDSQWYRDSYQLLQ 268


>gi|90424787|ref|YP_533157.1| putative lipoprotein [Rhodopseudomonas palustris BisB18]
 gi|90106801|gb|ABD88838.1| putative lipoprotein [Rhodopseudomonas palustris BisB18]
          Length = 289

 Score =  285 bits (729), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 73/250 (29%), Positives = 125/250 (50%), Gaps = 4/250 (1%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ-NFSKAYEYFN 81
            + +   ++ C          + +  D         ++Y + +  + +  +   A + F 
Sbjct: 19  LIVLTLPLSGCGTGALW---DKFMTKDETYTDEPADKLYNEGLYLMNKGKDPKAASKKFE 75

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
           +  R  P++  ARKSLLMSA+  Y AG Y         Y+T +P S +  Y  YL+  S+
Sbjct: 76  EVDRQHPYSDWARKSLLMSAYAFYEAGDYDSCIGSATRYVTMHPGSPDAAYAQYLIAASH 135

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
              I D+  DQ  T+  +  +  ++ +Y  S Y   A+  +   R+QLA KE+ +GRYY+
Sbjct: 136 YDQIPDISRDQGRTEKAIAALEEVIRKYPTSEYATSAKKKLEGARDQLAGKEMNVGRYYM 195

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           ++ +Y AAI RF+ V+  Y    H EEA+ARL EAY+A+ ++ EA+   +++   +P   
Sbjct: 196 EKRDYTAAINRFKTVVTRYQTTRHVEEALARLTEAYMAIGIVGEAQTAAAVLGHNFPDSK 255

Query: 262 WARYVETLVK 271
           W +    LVK
Sbjct: 256 WYQDAYNLVK 265


>gi|296532811|ref|ZP_06895488.1| lipoprotein [Roseomonas cervicalis ATCC 49957]
 gi|296266872|gb|EFH12820.1| lipoprotein [Roseomonas cervicalis ATCC 49957]
          Length = 281

 Score =  285 bits (729), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 76/250 (30%), Positives = 131/250 (52%), Gaps = 1/250 (0%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           + +L +   + V     W+ + S      SV D +    +Y   +  L+++ + +A E F
Sbjct: 10  RLSLILAAPLLVGACSAWDGKDSSLRPRASVAD-QSPEALYAAGIEALRQERYQQAVEMF 68

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
           +    + P++  A  + LMSA+ +Y   +Y +A    + +I  +P  +++ Y YYL  + 
Sbjct: 69  DAVESNHPYSTWATSAKLMSAYSEYMRNRYTEAIGALDRFIQLHPAHRDIAYAYYLRALC 128

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
           Y + I D   DQR T+  L  +  +V R+ +S Y + AR  + + R+ LA +E+ +GR+Y
Sbjct: 129 YYEQIVDAERDQRGTETALAQLQDVVNRFPDSAYARDARLKMDLARDHLAGREMIVGRFY 188

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
             RG Y AAI RF+ V+ +Y    H  EA+ RL E Y+AL L +EAR+  S++   YP  
Sbjct: 189 QARGLYTAAIGRFKRVVEDYQTTNHVPEALHRLTEVYLALGLTEEARQTASVLGHNYPGS 248

Query: 261 YWARYVETLV 270
            W +    L+
Sbjct: 249 PWYQDSYALL 258


>gi|209884392|ref|YP_002288249.1| coml, competence lipoprotein [Oligotropha carboxidovorans OM5]
 gi|209872588|gb|ACI92384.1| coml, competence lipoprotein [Oligotropha carboxidovorans OM5]
          Length = 281

 Score =  284 bits (728), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 78/251 (31%), Positives = 130/251 (51%), Gaps = 1/251 (0%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLK-EQNFSKAYEYF 80
            AL +    A     G      +    D     +   ++Y + +  L  +++   A + F
Sbjct: 7   LALGVITLAAPLGGCGTGNLWDKFFAKDETFVDQPADKLYNEGLYLLNEKKDRKGALKKF 66

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
            +  R  P++  ARKSLLMSA+  Y +G Y +  +    YI+ +P S +  Y  YLV +S
Sbjct: 67  EEVDRQHPYSDWARKSLLMSAYAAYESGDYDECIASANRYISLHPGSPDAAYAQYLVAVS 126

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
           +   I DV  DQ  T+  +  +  +V +Y NS Y   A+  +   R+QLA +E+ IGRYY
Sbjct: 127 HYDQIPDVSRDQTRTEKAIASLEEVVRKYPNSEYATTAKKKIEGARDQLAGREMTIGRYY 186

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           +++ +Y  AI RF++V+  Y    H EEA+ARL EAY+A+ ++ EA+   +++   +P  
Sbjct: 187 MEKRDYTGAINRFKVVVTQYQTTRHVEEALARLTEAYMAIGVVSEAQTAAAVLGHNFPDS 246

Query: 261 YWARYVETLVK 271
            W +    LV+
Sbjct: 247 RWYKDAYNLVR 257


>gi|94497005|ref|ZP_01303579.1| DNA uptake lipoprotein [Sphingomonas sp. SKA58]
 gi|94423681|gb|EAT08708.1| DNA uptake lipoprotein [Sphingomonas sp. SKA58]
          Length = 266

 Score =  284 bits (727), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 75/249 (30%), Positives = 126/249 (50%), Gaps = 3/249 (1%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           A T    IA   L G     ++   L    DV     +Y      L    +  A   F++
Sbjct: 15  AATALVLIASPVLTGCSTSKNKADTLYVARDVST---LYNSGKDRLDRGQYKLAAALFDE 71

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
             R  P++  AR++ LMSAF  Y    Y ++ S  + +++ +  +K+  Y YYL+ + Y 
Sbjct: 72  VERQHPYSPWARRAQLMSAFSYYMNRDYAESISAAQRFLSIHTGNKDAPYAYYLIAICYY 131

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
           + I DV  DQ+ T+  L  +  ++ RY  + Y   AR  V +  + LA KE+E+GR+Y +
Sbjct: 132 EQIADVTRDQKITQQALDSLGELIRRYPQTRYAADARLKVDLVNDHLAGKEMEVGRFYQR 191

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           RG+++AA  RF+ V+  Y    H  EA+ RLVE+Y++L +  EA++  +++   YP   W
Sbjct: 192 RGQWLAATLRFRTVIDKYQTTTHTPEALERLVESYLSLGIPAEAQKAAAVLGRNYPGTKW 251

Query: 263 ARYVETLVK 271
                 L++
Sbjct: 252 YERSYKLMQ 260


>gi|13471541|ref|NP_103107.1| hypothetical protein mll1543 [Mesorhizobium loti MAFF303099]
 gi|18202649|sp|Q98KC1|Y1543_RHILO RecName: Full=UPF0169 lipoprotein Mll1543; Flags: Precursor
 gi|14022283|dbj|BAB48893.1| mll1543 [Mesorhizobium loti MAFF303099]
          Length = 289

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 83/252 (32%), Positives = 130/252 (51%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
               L +   +   FL               V        +Y + +  L      +A + 
Sbjct: 14  RSVLLALSLVVPSLFLSACMSSEKDIDLSKYVDQTEPADVLYNQGLANLNAGRLDEASKK 73

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
           F+   R  P++  ARKS++M AF  Y  G Y +A S  + Y+  YP + +  Y  Y++G+
Sbjct: 74  FDAVDRQHPYSEWARKSMVMGAFADYRKGSYDEAISSAKRYLALYPSTDDAPYAQYIIGL 133

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           SY + I+DV  DQ+  +  LQ M  +V R+  S YV  A+  +    +QLA KE++IGRY
Sbjct: 134 SYYRQIKDVTQDQKEARQTLQTMQDLVTRWPTSEYVDDAKEKIRFANDQLAGKEMQIGRY 193

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           YL+R EY+AA+ RF+ V+ NYS+  H EEA+ARL E+Y A+ L  EA+   +++   YP 
Sbjct: 194 YLERREYIAAVKRFRTVVENYSNTRHVEEALARLTESYYAMGLTSEAQTAAAVLGTNYPD 253

Query: 260 GYWARYVETLVK 271
             W +    L++
Sbjct: 254 SPWYKDSYKLLQ 265


>gi|295688858|ref|YP_003592551.1| outer membrane assembly lipoprotein YfiO [Caulobacter segnis ATCC
           21756]
 gi|295430761|gb|ADG09933.1| outer membrane assembly lipoprotein YfiO [Caulobacter segnis ATCC
           21756]
          Length = 315

 Score =  283 bits (726), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 83/250 (33%), Positives = 130/250 (52%), Gaps = 3/250 (1%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           + A+TI   +    + G   +S +        + R    +Y      L   N+++A +YF
Sbjct: 17  RSAVTIAAVLVAVSVAGCAGKSKK---PSLAYEERPVELLYSTGADRLDRGNWNEAVDYF 73

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
            +  R  P++  +R+S+LM+ +  Y    Y  A    + +I+ YP + +  Y YYL  + 
Sbjct: 74  REVERQHPYSEWSRRSILMTGYAHYMGNNYNDAIGDADRFISLYPGNPSASYAYYLKAVC 133

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
           Y + I DV  DQ AT+  L  +  +V+RY NS Y   AR  + +  +QLA KE+ IGRYY
Sbjct: 134 YFEQIVDVNRDQAATEQALAALRDVVQRYPNSEYATDARLKIDMVNDQLAGKEMAIGRYY 193

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           LK G+ +AAI RF+ VL  +    H  EA+ RLVEAY+ L LMDEA+   +++   +P  
Sbjct: 194 LKNGQTLAAIGRFKAVLERHQTTSHTPEALYRLVEAYLTLGLMDEAKRNGAVLGYNFPGD 253

Query: 261 YWARYVETLV 270
            W      L+
Sbjct: 254 RWYADAYRLL 263


>gi|329115585|ref|ZP_08244307.1| UPF0169 lipoprotein [Acetobacter pomorum DM001]
 gi|326695013|gb|EGE46732.1| UPF0169 lipoprotein [Acetobacter pomorum DM001]
          Length = 345

 Score =  283 bits (724), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 71/262 (27%), Positives = 124/262 (47%), Gaps = 8/262 (3%)

Query: 9   ICIFEAWAYQLYKFALTIFF--SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVL 66
           ICI       +    L++    S+A C L       + +  L     +     +Y   + 
Sbjct: 4   ICIKPQLLRHVLPHVLSVALLTSLAGCGLF------NENKKLPPAPKIAAPETLYNNGID 57

Query: 67  FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
            L+ + ++ A   F    +++P++G    + LM  +  Y  GKY +A      +I+ +P 
Sbjct: 58  ALRTRRYALAASEFETLQQNYPYSGYIANAQLMEGYAYYLKGKYPEAVQQLNRFISLHPT 117

Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
           S +  Y YYL  + + + I DV  DQ+ T   +  +  ++ R+  S Y + A+  + + R
Sbjct: 118 SSDSAYAYYLRALCFYEQIADVQRDQQGTAESMDALEEVITRFPQSKYARDAQLKIDLCR 177

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
           + LA KE+ +GRYY +   Y  AI R+Q V+ ++    H  EA+ R+VE Y+ L L D+A
Sbjct: 178 DHLAGKEMLVGRYYQREKNYEGAINRYQRVVQDFQTTNHVPEALERMVEVYLDLGLTDQA 237

Query: 247 REVVSLIQERYPQGYWARYVET 268
           R+   ++   YP   W RY   
Sbjct: 238 RKSAIVLGYNYPGSKWYRYAYD 259


>gi|258542978|ref|YP_003188411.1| hypothetical protein APA01_19070 [Acetobacter pasteurianus IFO
           3283-01]
 gi|256634056|dbj|BAI00032.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
 gi|256637116|dbj|BAI03085.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
 gi|256640168|dbj|BAI06130.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
 gi|256643225|dbj|BAI09180.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
 gi|256646280|dbj|BAI12228.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
 gi|256649333|dbj|BAI15274.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
 gi|256652319|dbj|BAI18253.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256655377|dbj|BAI21304.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
          Length = 345

 Score =  282 bits (722), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 71/262 (27%), Positives = 124/262 (47%), Gaps = 8/262 (3%)

Query: 9   ICIFEAWAYQLYKFALTIFF--SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVL 66
           ICI       +    L++    S+A C L       + +  L     +     +Y   + 
Sbjct: 4   ICIKPQLLRHVLPRVLSVALLTSLAGCGLF------NENKKLPPAPKIAAPETLYNNGID 57

Query: 67  FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
            L+ + ++ A   F    +++P++G    + LM  +  Y  GKY +A      +I+ +P 
Sbjct: 58  ALRTRRYALAASEFETLQQNYPYSGYIANAQLMEGYAYYLKGKYPEAVQQLNRFISLHPT 117

Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
           S +  Y YYL  + + + I DV  DQ+ T   +  +  ++ R+  S Y + A+  + + R
Sbjct: 118 SSDSAYAYYLRALCFYEQIADVQRDQQGTAESMDALEEVITRFPQSKYARDAQLKIDLCR 177

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
           + LA KE+ +GRYY +   Y  AI R+Q V+ ++    H  EA+ R+VE Y+ L L D+A
Sbjct: 178 DHLAGKEMLVGRYYQREKNYEGAINRYQRVVQDFQTTNHVPEALERMVEVYLDLGLTDQA 237

Query: 247 REVVSLIQERYPQGYWARYVET 268
           R+   ++   YP   W RY   
Sbjct: 238 RKSAIVLGYNYPGSKWYRYAYD 259


>gi|319782856|ref|YP_004142332.1| outer membrane assembly lipoprotein YfiO [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317168744|gb|ADV12282.1| outer membrane assembly lipoprotein YfiO [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 289

 Score =  281 bits (720), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 82/248 (33%), Positives = 129/248 (52%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L +   +   FL               V        +Y + +  L      +A   F+  
Sbjct: 18  LALSVVVPSLFLSACMSSEKDIDLSTYVDQTEPADVLYNQGLANLNAGRLQEASRKFDAV 77

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
            R  P++  ARKS++M AF  Y  G Y +A    + Y+T YP + +  Y  Y++G+SY +
Sbjct: 78  DRQHPYSEWARKSMVMGAFADYRQGNYDEAIGSAKRYLTLYPSTDDAAYAQYIIGLSYYR 137

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
            I+DV  DQ+  +  +Q M  +V R+  S YV  A+  +    +QLA KE++IGRYYL+R
Sbjct: 138 QIKDVTQDQKEARQTVQTMQDLVTRWPTSEYVDDAKEKIRFANDQLAGKEMQIGRYYLER 197

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
            EY+AA+ RF+ V+ NYS+  H EEA+ARL E+Y A+ L  EA+   +++   YP   W 
Sbjct: 198 REYIAAVKRFRTVVENYSNTRHVEEALARLTESYYAMGLTSEAQTAAAVLGTNYPDSSWY 257

Query: 264 RYVETLVK 271
           +    L++
Sbjct: 258 KDSYKLLQ 265


>gi|114570618|ref|YP_757298.1| DNA uptake lipoprotein-like protein [Maricaulis maris MCS10]
 gi|114341080|gb|ABI66360.1| DNA uptake lipoprotein-like protein [Maricaulis maris MCS10]
          Length = 276

 Score =  281 bits (720), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 80/252 (31%), Positives = 133/252 (52%), Gaps = 4/252 (1%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +   +  +   +    L          V        R    +Y  A   L  Q +  A  
Sbjct: 1   MTFMSRIVAPLVLSALLASCASGPDNSVAYVE----RPAETIYATAFESLDRQQYPLAAA 56

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            F++  R  P++  AR+++LM+A+  Y +  Y +A S  + +I+ +P ++N  Y YYL+ 
Sbjct: 57  RFDEVERQHPYSEWARRAMLMAAYANYESNNYDEAISDAQRFISLHPGNRNAAYAYYLIA 116

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           +S+ + I DV  DQ AT+  L  + ++V R+ +S Y   AR  + + R+ LA KE+ +GR
Sbjct: 117 ISHFEQIMDVGRDQAATQQALLSLEQVVRRFPDSRYATDARLKIDMTRDHLAGKEMSVGR 176

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           +YL+RG ++AAI RFQ VL  Y +  H  EA+ RLVE+YV+L + +EAR+V S++   +P
Sbjct: 177 WYLRRGYHLAAINRFQNVLREYGNTSHVPEALHRLVESYVSLGIDEEARQVASVLGYNFP 236

Query: 259 QGYWARYVETLV 270
              W      L+
Sbjct: 237 GSDWYETSYDLL 248


>gi|27381705|ref|NP_773234.1| hypothetical protein bll6594 [Bradyrhizobium japonicum USDA 110]
 gi|27354874|dbj|BAC51859.1| bll6594 [Bradyrhizobium japonicum USDA 110]
          Length = 296

 Score =  280 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 71/249 (28%), Positives = 123/249 (49%), Gaps = 4/249 (1%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLK-EQNFSKAYEYFNQ 82
           + +   +A C          +    D         ++Y + +  +  +++   A + F +
Sbjct: 27  IMLALPLAGCGTGALW---DKFTAKDDTFVEEPADKIYNEGLYLMNEKKDMKAANKKFEE 83

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
             R  P++  ARKSLLMSA+  Y  G Y         Y+T +P S +  Y  YL+  S+ 
Sbjct: 84  VDRQHPYSDWARKSLLMSAYASYQGGDYDGCIGAATRYVTLHPGSPDAAYAQYLIAASHY 143

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
             I D+  DQ  T+  +  +  ++ +Y  S Y   A+  +   R+QLA KE+ +GRYY++
Sbjct: 144 DQIPDISRDQSRTEKAIASLEEVIRKYPTSEYATSAKAKIEGARDQLAGKEMNVGRYYMQ 203

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           + +Y AAI R++ V+  Y    H EEA+ RL EAY+A+ ++ EA+   +++   +P   W
Sbjct: 204 KRDYTAAINRYKAVVTQYQTTRHVEEALYRLTEAYMAIGIVGEAQTAAAVLGHNFPDSRW 263

Query: 263 ARYVETLVK 271
            +    LVK
Sbjct: 264 YKDAYNLVK 272


>gi|323137883|ref|ZP_08072958.1| outer membrane assembly lipoprotein YfiO [Methylocystis sp. ATCC
           49242]
 gi|322396886|gb|EFX99412.1| outer membrane assembly lipoprotein YfiO [Methylocystis sp. ATCC
           49242]
          Length = 302

 Score =  280 bits (717), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 79/242 (32%), Positives = 132/242 (54%)

Query: 30  IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
           +      G+      + Y   +       ++Y + +  LK++++  A + F    + +P 
Sbjct: 37  LLDSVTSGFGLFGGGEKYKTEILPDIPADDLYNQGLAKLKKKDYEGAAKKFGDLEKQYPS 96

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +  +RK+LLM+ F Q+  G Y ++    + YI  YP S +  YVYYL GMS+   + DV 
Sbjct: 97  SEWSRKALLMTTFAQFQKGAYDESVQSAQRYIGLYPNSADTPYVYYLAGMSFYNQVPDVM 156

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
            DQ+  +  L+  ++++++Y  S YV  AR+ + V R+QLAAKE+ +GR+YL R  Y AA
Sbjct: 157 RDQQPAEKALEVFTQLIQKYPKSEYVTDARYKIQVTRDQLAAKEMNVGRFYLTRKNYPAA 216

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
           I RF  VL  Y    H EEA+ RL EAY+A+ + +EA+   +++   +P   W +    L
Sbjct: 217 INRFHDVLGKYQTTRHTEEALYRLTEAYMAMGVTNEAQTAAAILGHNFPDSQWYKDAHAL 276

Query: 270 VK 271
           +K
Sbjct: 277 LK 278


>gi|288958800|ref|YP_003449141.1| lipoprotein [Azospirillum sp. B510]
 gi|288911108|dbj|BAI72597.1| lipoprotein [Azospirillum sp. B510]
          Length = 271

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 77/254 (30%), Positives = 139/254 (54%), Gaps = 11/254 (4%)

Query: 17  YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
           Y+L   A+ +  +++ C        +  D Y++   D     ++  +A   ++++ F KA
Sbjct: 6   YRLPLTAILLSAALSAC------SSTKEDAYVERPAD-----QLLSEADAAMRDEAFKKA 54

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            + +++  R  P++  A K+ L++A+  Y   KY  A    + +I  +P S +VDY YY+
Sbjct: 55  AKLYDEVERQHPYSDSASKAQLLAAYAHYQDLKYDDAILALDRFIQLHPGSPDVDYAYYM 114

Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
             +SY + I DV  DQ+ T+  L  +  +V R+ +S Y + A+  + +  + LA KE+E+
Sbjct: 115 RALSYYEQITDVRRDQKMTRQALDALQEVVRRFPDSKYARDAKLKIDLTNDHLAGKEMEV 174

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           GR+YL++ +Y AAI RF++V+ NY    H  EA+ RLVE Y+AL + DEA+   +++   
Sbjct: 175 GRFYLRQRQYTAAINRFRVVVENYQTTSHVPEALHRLVECYLALGVTDEAKAAAAVLGHN 234

Query: 257 YPQGYWARYVETLV 270
           +P   W      L+
Sbjct: 235 FPGSEWYTDSYALL 248


>gi|148257409|ref|YP_001241994.1| hypothetical protein BBta_6164 [Bradyrhizobium sp. BTAi1]
 gi|146409582|gb|ABQ38088.1| hypothetical protein BBta_6164 [Bradyrhizobium sp. BTAi1]
          Length = 297

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 76/243 (31%), Positives = 127/243 (52%), Gaps = 8/243 (3%)

Query: 32  VCFLVGWERQ--SSRDVYLDSVTDVRYQREVYEKAVLFLK-EQNFSKAYEYFNQCSRDFP 88
            C   G   +  +  D ++D   D     ++Y + +  +  +++   A + F +  R  P
Sbjct: 36  GCGTGGLWDKFLAKDDTFVDEPAD-----KLYNEGLYLMNEKKDVKGATKKFEEVDRQHP 90

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
           ++  ARKSLLMSA+  Y AG Y         Y+T +P S +  Y  YL+  S+   I D+
Sbjct: 91  YSDWARKSLLMSAYASYQAGDYDGCIGAATRYVTLHPGSPDAAYAQYLIAASHYDQIPDI 150

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
             DQ  T+  +  +  +V +Y NS Y   A+  +   R+QLA KE+++GRYY+++ +Y A
Sbjct: 151 SRDQGRTEKAIAALEEVVRKYPNSEYATNAKAKMEGARDQLAGKEMDVGRYYMQKRDYTA 210

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           AI RF+ V+  Y    H EEA+ RL EAY+ + ++ EA+   +++   +P   W +    
Sbjct: 211 AINRFKAVVTQYQTTRHVEEALYRLTEAYMTIGIVGEAQTAAAVLGHNFPDSKWYKDAYN 270

Query: 269 LVK 271
           LVK
Sbjct: 271 LVK 273


>gi|148554377|ref|YP_001261959.1| DNA uptake lipoprotein-like protein [Sphingomonas wittichii RW1]
 gi|148499567|gb|ABQ67821.1| DNA uptake lipoprotein-like protein [Sphingomonas wittichii RW1]
          Length = 261

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 76/253 (30%), Positives = 133/253 (52%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           L K +  I   IA   LV     ++     D+    R    +Y  A   L    +  A  
Sbjct: 2   LRKVSRPIALMIAAATLVPLAGCATSKNKGDTKYVARDVDTLYNAAKERLDRHQYKLAAA 61

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            F++  R  P++  AR++ LMSAF  Y A +Y ++ +  + +I+ +P +++  Y  YL+ 
Sbjct: 62  LFDEVERQHPYSVWARRAQLMSAFSYYLARQYTESIASAQRFISIHPGNRDAPYALYLIA 121

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           + Y + I+DV  DQ+ T+  L  ++ ++ RY +S Y   AR  V +  + LA KE+EIGR
Sbjct: 122 IDYYEQIQDVTRDQKLTQNALDALNELIRRYPDSRYAADARVKVDLVNDHLAGKEMEIGR 181

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           +Y +RG+++A++ RF+ V+  Y    H  EA+ RL E+Y+ L +  EA    +++   YP
Sbjct: 182 FYQRRGDWLASVVRFRTVVDKYDTTSHTPEALMRLTESYLELGVPQEAERAAAVLGANYP 241

Query: 259 QGYWARYVETLVK 271
              W ++   L++
Sbjct: 242 GSKWYQHSYELLR 254


>gi|113867447|ref|YP_725936.1| DNA uptake lipoprotein [Ralstonia eutropha H16]
 gi|113526223|emb|CAJ92568.1| DNA uptake lipoprotein [Ralstonia eutropha H16]
          Length = 276

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 59/247 (23%), Positives = 108/247 (43%), Gaps = 12/247 (4%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDV--RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
           AV    G    S+  +  D   +       ++Y +A   L   ++++A + + +    +P
Sbjct: 17  AVLLAGGCVMLSACGLLADQPDETAGWSANKLYSEAKDALDGGDYTRAVKLYEKLEGRYP 76

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM---- 144
           F   A+++ + +A+  Y  G+   A +  + +I  +P   N+DY YYL G+         
Sbjct: 77  FGRYAQQAQIDTAYANYKDGETAAALAAVDRFIQLHPNHPNIDYAYYLKGLINFNDNLGW 136

Query: 145 ------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
                       D +A +      + ++ RY  S Y   A   +    N LA  EV   R
Sbjct: 137 LGRFSGQDLSERDPKAARAAYDAFNTLITRYPESKYTPDATLRMQYIVNSLAQHEVHAAR 196

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           YY +RG Y+AA+ R Q  L +Y  A   EEA+  +V +Y A+ + D   +   +++  +P
Sbjct: 197 YYYRRGAYLAAVNRAQQALKDYDGAPANEEALYIMVRSYDAMGMKDLRDDTARVMERNFP 256

Query: 259 QGYWARY 265
              + +Y
Sbjct: 257 DSDFIKY 263


>gi|83858907|ref|ZP_00952429.1| competence lipoprotein ComL, putative [Oceanicaulis alexandrii
           HTCC2633]
 gi|83853730|gb|EAP91582.1| competence lipoprotein ComL, putative [Oceanicaulis alexandrii
           HTCC2633]
          Length = 277

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 78/252 (30%), Positives = 135/252 (53%), Gaps = 4/252 (1%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +               L     +   ++        +    +Y +A   ++ + + +A  
Sbjct: 1   MKTVLRVALLGAVALSLTACAGRDREELAYVE----QPVETLYAEAFDKMQRRRYDEAAA 56

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
           YF++  R  PF+  AR+S+LM+A+  Y   KY +A S  + +I  +P + +  Y YYL+ 
Sbjct: 57  YFDEVERQHPFSEWARRSMLMAAYANYRQSKYDEAISDAQRFIALHPGNASAPYAYYLIA 116

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           +SY + I DV  DQ  T+  LQ + ++V RY ++PY + AR  + + R+ LA KE+ +GR
Sbjct: 117 LSYYERIYDVGRDQSTTQQALQALEQVVRRYPDTPYAQDARLKIDMTRDHLAGKEMSVGR 176

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           +YL+ G ++AAI RFQ V+ +Y    H  EA+ RLVEAYV+L + +EAR++ +++   +P
Sbjct: 177 WYLRNGYHLAAINRFQNVIRDYETTSHTPEALHRLVEAYVSLGVDEEARQIAAVLGYNFP 236

Query: 259 QGYWARYVETLV 270
              W      L+
Sbjct: 237 GSEWYEDSYDLL 248


>gi|194289463|ref|YP_002005370.1| lipoprotein, coml family, tetratricopeptide repeats (tpr) domain
           [Cupriavidus taiwanensis LMG 19424]
 gi|193223298|emb|CAQ69303.1| putative lipoprotein, ComL family, tetratricopeptide repeats (TPR)
           domain [Cupriavidus taiwanensis LMG 19424]
          Length = 276

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 58/247 (23%), Positives = 109/247 (44%), Gaps = 12/247 (4%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDV--RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
           AV    G    S+  +  D   +       ++Y +A   L   ++++A + + +    +P
Sbjct: 17  AVLLAGGCVMLSACGLLADQPDETAGWSANKLYSEAKDALDGGDYTRAVKLYEKLEGRYP 76

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM---- 144
           F   A+++ + +A+  Y  G+   A +  + +I  +P   N+DY YYL G+         
Sbjct: 77  FGRYAQQAQIDTAYANYKDGETAAALAAVDRFIQLHPNHPNIDYAYYLKGLINFNDNLGW 136

Query: 145 ------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
                       D +A +        ++ RY  S Y   A   +    N LA  EV   R
Sbjct: 137 LGRFSGQDLSERDPKAARAAYDAFHTLITRYPESKYTPDATLRMQYIVNSLAQHEVHAAR 196

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           YY +RG Y+AA+ R Q  L +Y  A   EEA+  ++ +Y A+ + D   +   ++++ +P
Sbjct: 197 YYFRRGAYLAAVNRAQQSLKDYDGAPANEEALYIMIRSYDAMGMKDLRDDTARVMEKNFP 256

Query: 259 QGYWARY 265
           +  + +Y
Sbjct: 257 ESDFIKY 263


>gi|297182617|gb|ADI18776.1| DNA uptake lipoprotein [uncultured gamma proteobacterium
           HF4000_36I10]
          Length = 310

 Score =  279 bits (715), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 54/243 (22%), Positives = 109/243 (44%), Gaps = 17/243 (6%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
              + V  L        ++           ++++Y +A   L+  N+S A +        
Sbjct: 8   LMILLVGVLAACASDPEKEAE-------SSEKQIYNQAQEHLENGNYSLAVKNLQLLESR 60

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
           FPF   A ++ L   +  Y + + + A +  + +I  +P+  +VDY YY+ G++     +
Sbjct: 61  FPFGPYAEQAQLEIIYAHYRSLEPEAAIAAADRFIRLHPQHPSVDYAYYMRGLANYTEGQ 120

Query: 147 DV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
            +            D  A     +   ++++R+ +S Y   AR  +   RN+LA  E+ +
Sbjct: 121 GLLERFFPTDMSQRDPGAAVQAFEDFRQLLQRFPDSQYAPDARARMIHLRNRLARYEINV 180

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
             YY KR  Y+AA  R + V+ N        +A+A +V+AY+ L + D A   +++++  
Sbjct: 181 ANYYFKRKAYLAAANRGRYVVENMPQTSAVPDALAVMVQAYLLLGMDDLADRSLTVLRSN 240

Query: 257 YPQ 259
           +P+
Sbjct: 241 FPK 243


>gi|226941138|ref|YP_002796212.1| ComL [Laribacter hongkongensis HLHK9]
 gi|226716065|gb|ACO75203.1| ComL [Laribacter hongkongensis HLHK9]
          Length = 263

 Score =  279 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 54/259 (20%), Positives = 107/259 (41%), Gaps = 17/259 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K A+ +  +    +L G    S         T      ++Y +A   L   N+++A +
Sbjct: 1   MKKIAVMMLMA---AWLAGCSTTS----EPADETRGWTVEKLYSEARDELNSGNYTRAIK 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            +      +P+   A+++ +  A+  +   +   + +  + +I  +P   NVDYVYYL G
Sbjct: 54  LYETLEARYPYGRYAQQAQMDLAYAHFKDQEPALSLAAADRFIKLHPAHPNVDYVYYLKG 113

Query: 139 MSYAQMI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +                     D +A +        +V R+ +S Y   AR  +    + 
Sbjct: 114 LVNYNEDGGILSKYTGQDRAERDPKAAREAFTSFRDLVVRFPDSRYAPDARVKMQNLVDG 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E+ + RYY++R  Y+AA  R Q ++  + D+   EE+ A +V AY  L       +
Sbjct: 174 LAEHELFVARYYMRRSAYLAAANRAQGMIKEFPDSPFVEESFAIMVTAYDKLGKTTLRDD 233

Query: 249 VVSLIQERYPQGYWARYVE 267
              +++  +P   + +   
Sbjct: 234 TRRVLETNFPNSVYLKKPW 252


>gi|257095461|ref|YP_003169102.1| outer membrane assembly lipoprotein YfiO [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257047985|gb|ACV37173.1| outer membrane assembly lipoprotein YfiO [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 264

 Score =  279 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 10/226 (4%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
              T      ++Y +A   L + +++KA +YF +    +P+   A+++ +  A+  +   
Sbjct: 26  KDETIGWSANKLYAEAKDALNDGSYAKAIKYFEKLESRYPYGRYAQQAQIEIAYAYWKDQ 85

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLM 158
           +   A +  + +I  +P   NVDYVYYL G+        +            D +  +  
Sbjct: 86  EPASAVAACDRFIKLHPNHPNVDYVYYLRGLINFNEDLGIMGTISNQDMTERDPKGARES 145

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
                 +V R+ +S Y   A   +    N LA+ E+ + RYY+KRG Y+AA  R Q  + 
Sbjct: 146 FDAFRELVTRFPDSKYTPDALLRMKYLVNALASLELHVARYYMKRGAYLAAANRAQYAVK 205

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
           NY DA   EEA+  +V+AY +L L D   +   +++  YP   + R
Sbjct: 206 NYPDAPATEEALFIMVKAYDSLGLNDLRDDAERVMRTNYPNSDYYR 251


>gi|170728052|ref|YP_001762078.1| putative lipoprotein [Shewanella woodyi ATCC 51908]
 gi|169813399|gb|ACA87983.1| putative lipoprotein [Shewanella woodyi ATCC 51908]
          Length = 268

 Score =  279 bits (714), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 58/271 (21%), Positives = 99/271 (36%), Gaps = 17/271 (6%)

Query: 1   MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
           M   L   +       +   K A+   FS+A+          S +      T       +
Sbjct: 1   MKKFLTITLKESNLSMHTFVKGAVIGLFSLAITAC-------SSNQEDQLKTSKSSPDVL 53

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +A   ++  N+SKA          +PF     +  L   +  Y         +  + +
Sbjct: 54  YSQARTSMELGNYSKAVRSLEALDSRYPFGPHKTQVQLDLIYAYYKLDDPASGIANIDRF 113

Query: 121 ITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYT 170
           I   P  KN+DYVYY+ G+   Q           I     D +  +   +   R+++ Y 
Sbjct: 114 IRLNPTHKNIDYVYYMRGLVNMQSDNYMFHDMLNIDRTDRDPKVAQDAFKDFDRLIKSYP 173

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
           NS Y   A   +   +N+LA   + +  YY+K   + AA  R Q V+  +      E A+
Sbjct: 174 NSKYAPDAAKRMQQLKNRLAKYSINVAEYYIKMNAWSAAATRAQSVMETFPGTPSTERAL 233

Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             +  AY  L        V+S++Q  +P   
Sbjct: 234 EIMSIAYGELGQAKLKENVLSVMQANFPNNS 264


>gi|197105773|ref|YP_002131150.1| DNA uptake lipoprotein [Phenylobacterium zucineum HLK1]
 gi|196479193|gb|ACG78721.1| DNA uptake lipoprotein [Phenylobacterium zucineum HLK1]
          Length = 305

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 72/227 (31%), Positives = 118/227 (51%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
                  V + R    +Y      L    +++A  YF +  R  P++  +R+S+LM A+ 
Sbjct: 27  NKKKPRLVYEERPVELLYATGANRLDRGLWNQAINYFQEVERQHPYSEWSRRSILMQAYA 86

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
            Y +  Y +A    + +I  YP +    Y +Y+  + Y + I DV  DQ AT   L+ + 
Sbjct: 87  HYQSNDYPEAIGDADRFIQLYPGNPAAAYAHYIKAICYFEQIVDVGRDQAATGQALEALR 146

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
            +V+RY  S Y + AR  + +  +QLA KE+ +GR+YL+ G+ +AA+ RF+ V+  Y   
Sbjct: 147 AVVQRYPASEYAQDARLKIDMVNDQLAGKEMTVGRWYLRNGDTLAAVNRFKTVVDRYQTT 206

Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
            H  EA+ RLVEAY+ L L +EA+   +++   YP   W R    L+
Sbjct: 207 THTPEALYRLVEAYLTLGLTEEAKRNGAVLGYNYPGDPWYRDAYRLL 253


>gi|157376632|ref|YP_001475232.1| putative lipoprotein [Shewanella sediminis HAW-EB3]
 gi|157319006|gb|ABV38104.1| putative lipoprotein [Shewanella sediminis HAW-EB3]
          Length = 282

 Score =  278 bits (711), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 58/271 (21%), Positives = 99/271 (36%), Gaps = 17/271 (6%)

Query: 1   MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
           M   L   +       ++  K A+   FS+A   +         D+ +           +
Sbjct: 15  MEKFLTITLKESNLSMHKFAKGAVVGLFSLA---IAACSSSPEEDLKVKK----SSPDIL 67

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +A   ++  NFSKA          +PF     +  L   F  Y         +  + +
Sbjct: 68  YSQARTSMELGNFSKAVRSLEALDSRYPFGPHKTQVQLDLIFAYYKLDDAASGIANIDRF 127

Query: 121 ITQYPESKNVDYVYYLVGMSYAQ----------MIRDVPYDQRATKLMLQYMSRIVERYT 170
           I   P  K++DYVYY+ G+   Q           I     D +  +       R+++ Y 
Sbjct: 128 IRLNPTHKDIDYVYYMRGLVNMQSDNYMFHDMLDIDRTDRDPKVAQDAFNDFDRLIKSYP 187

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            S Y   A   +   +N+LA   + +  YY+K   + AA  R Q V+  Y      E A+
Sbjct: 188 KSKYAPDAAKRMLYLKNRLAKYSINVAEYYIKMNAWSAASTRAQSVMETYPGTTSTERAL 247

Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             + EAY  L        V+S+++  +P   
Sbjct: 248 EIMAEAYGELGQEKLRENVLSVMKINFPNNK 278


>gi|144897937|emb|CAM74801.1| competence lipoprotein ComL [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 271

 Score =  278 bits (711), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 75/241 (31%), Positives = 130/241 (53%)

Query: 30  IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
           +A   L+      S           R   E+Y +A+  +++  + KA   F++  R  P+
Sbjct: 10  LAGATLIATALLLSACSDKKDEYVERPVEELYNEAMDLVEKGEYYKAALAFDEVDRQHPY 69

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +  A K+ LM+A+V Y   KY  A    + +I  +P +K+  Y YYL G+ Y + + DV 
Sbjct: 70  SVWATKAQLMNAYVLYERNKYPDALVALDRFIQLHPGNKDAPYAYYLKGLCYYEQVTDVA 129

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
            DQ+ T++ L+ +  +V+RY  S Y + A+  V + R+ LA KE+ I RYY KR +++AA
Sbjct: 130 RDQKMTEMALKSLQEVVDRYPASSYARDAKLKVDLTRDHLAGKEMNIARYYQKRDQWLAA 189

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
           + R+++V+  Y    H  EA+ R+VE Y+ L L +EA++  ++I   +P   W     ++
Sbjct: 190 LNRYKIVVEQYQTTSHVPEALHRMVEIYLTLGLTEEAKKTAAVIGHNFPGSDWYEDTFSM 249

Query: 270 V 270
           V
Sbjct: 250 V 250


>gi|220927172|ref|YP_002502474.1| outer membrane assembly lipoprotein YfiO [Methylobacterium nodulans
           ORS 2060]
 gi|219951779|gb|ACL62171.1| outer membrane assembly lipoprotein YfiO [Methylobacterium nodulans
           ORS 2060]
          Length = 299

 Score =  278 bits (711), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 74/252 (29%), Positives = 137/252 (54%), Gaps = 5/252 (1%)

Query: 25  TIFFSIAVCFLVGWERQSS-----RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
               +     L G +   S      + Y   +   R   ++Y + +  L++ ++ +A + 
Sbjct: 17  VALLAACGAGLAGCDALDSINPFGPEKYKPEIIQRRPADKIYSEGLAKLEDHDYDEAVKR 76

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
           F    +++ ++  +RK++LM+A+  Y   KY+ A +  + Y+ ++P SK+  Y  Y++ M
Sbjct: 77  FENLDKEYAYSDWSRKAVLMTAYSNYEGQKYEDAITAAKRYLQRHPGSKDAAYAQYILAM 136

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           S+ + I DV  DQ  ++  L  +  +V++Y  S Y   A+  + + R+QLA KE+ IGRY
Sbjct: 137 SHYKQIPDVTRDQERSERALAALQELVQKYPTSEYAADAKAKIQITRDQLAGKEMAIGRY 196

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           YL+R  + AAI RF+ V++ Y    HAEEA+ RL EAY+AL ++ EA+   +++   +P 
Sbjct: 197 YLERRNFPAAINRFRDVVSRYQTTRHAEEALERLAEAYMALGIVGEAQTAAAVLGHNFPD 256

Query: 260 GYWARYVETLVK 271
             W +    L++
Sbjct: 257 SPWYKDAYALLQ 268


>gi|83312955|ref|YP_423219.1| DNA uptake lipoprotein [Magnetospirillum magneticum AMB-1]
 gi|82947796|dbj|BAE52660.1| DNA uptake lipoprotein [Magnetospirillum magneticum AMB-1]
          Length = 304

 Score =  277 bits (710), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 73/218 (33%), Positives = 119/218 (54%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
            R   E+Y +A+  +    + KA + F++  R  P++  A K+ LMSA+  Y   KY  A
Sbjct: 36  ERPVEELYNEAMDLVDANEYYKAAQLFDEVDRQHPYSVWATKAQLMSAYALYERNKYDDA 95

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
               + +I  +P +K++ Y YYL G+ Y + I DV  DQ+ T+  L+ M  +V+R+ ++P
Sbjct: 96  IVALDRFIQLHPGNKSIAYGYYLKGLCYYEQITDVARDQKLTEQALKIMQEVVDRFPSTP 155

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
           Y + AR  + + R+ LA KE+ IGRYY     ++AA+ RF++V   Y    H  EA+ R+
Sbjct: 156 YARDARLKIDLARDHLAGKEMNIGRYYQHLEHHLAALNRFKVVAEQYQTTTHVPEALYRM 215

Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           VE Y AL L  EA    +++   +P   W      +V+
Sbjct: 216 VEIYTALGLDQEAARAAAVLGHNFPGSDWYEDAYAMVE 253


>gi|301629104|ref|XP_002943688.1| PREDICTED: hypothetical protein LOC100490343 [Xenopus (Silurana)
           tropicalis]
          Length = 475

 Score =  277 bits (710), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 62/256 (24%), Positives = 113/256 (44%), Gaps = 15/256 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +  L +F ++    L+     +S D      T      ++Y +A   +    + KA  
Sbjct: 211 MLRAPLPLFSALLAAGLIAGCASTSEDK-----TANWSPDKIYSEAREEMNSGAYDKAVP 265

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
              +         +A+++ L  A+ Q+  G+  QA +  E ++  +P S  +DY  YL G
Sbjct: 266 LLEKLEGRAAGTPLAQQAQLDKAYAQFKNGEKAQAIATLERFLKLHPASPAIDYALYLRG 325

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +        +            DQ+A K   +    +  R+ +S Y   AR  +T   N 
Sbjct: 326 LVNFNDNLGIFSWLSRQDLSERDQKAAKDSFESFRDLTTRFPDSRYAPDARQRMTYIVNA 385

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  EV + RYY +RG YVAA+ R Q  +++Y +   AEEA+  L+ +Y AL +     +
Sbjct: 386 LAQYEVHVARYYYERGAYVAAVGRAQQAISDYQNVPAAEEALYILIRSYDALGMAQLRDD 445

Query: 249 VVSLIQERYPQGYWAR 264
            + ++   YP+  + +
Sbjct: 446 TMRVMNASYPESGYVK 461


>gi|56478104|ref|YP_159693.1| putative competence lipoprotein precursor [Aromatoleum aromaticum
           EbN1]
 gi|56314147|emb|CAI08792.1| putative competence lipoprotein precursor [Aromatoleum aromaticum
           EbN1]
          Length = 265

 Score =  277 bits (710), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 61/255 (23%), Positives = 112/255 (43%), Gaps = 14/255 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +        IA   L G      +       T     + +Y +A  F+ E  + +A +
Sbjct: 1   MARVTFRSLAVIAALLLGGCGSMPEQIDE----TAGWNAQRLYSEAKTFMNEGAYEQAIK 56

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            F +    +P+   A+++ +  A+ QY +G+   A +  + +I  +P   N DY YYL G
Sbjct: 57  LFEKLEARYPYGRYAQQAQIEVAYAQYKSGEPALAIAAADRFIKLHPNHPNADYAYYLKG 116

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++       +            D +  +       ++V+R+  S Y + A   +    N 
Sbjct: 117 LATFNEDLGLLAGLSNQDLSERDPKGAQESFDTFGQLVKRFPESRYAEDAGQRMQYLVNS 176

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LAA EV + RYY +RG YVAA+ R +  L  Y  A  AEEA+  LV++Y  L + +   +
Sbjct: 177 LAAHEVHVARYYYRRGAYVAAVNRARTALETYPQAPAAEEALFVLVKSYDTLGMTELRDD 236

Query: 249 VVSLIQERYPQGYWA 263
              ++++ +P   + 
Sbjct: 237 ADRVMRKNFPNSVYF 251


>gi|167647062|ref|YP_001684725.1| outer membrane assembly lipoprotein YfiO [Caulobacter sp. K31]
 gi|167349492|gb|ABZ72227.1| outer membrane assembly lipoprotein YfiO [Caulobacter sp. K31]
          Length = 306

 Score =  277 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 80/248 (32%), Positives = 132/248 (53%), Gaps = 2/248 (0%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           A T+  ++ V   +      S+   L    + R    +Y      L   ++++A +YF +
Sbjct: 10  AATVATAVLVALSISACAGKSKKPTL--AYEERPVELLYSTGANRLDRGSWNEAVDYFRE 67

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
             R  P++  +R+S+LM+ +  Y   +Y +A S  + +I  YP + +  Y YYL  + Y 
Sbjct: 68  VERQHPYSEWSRRSILMTGYAHYMGNQYNEAISDSDRFIGLYPGNPSASYAYYLKAVCYF 127

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
           + I DV  DQ AT+  L  +  +V+RY NS Y + AR  + +  +QLA KE+ IGRYYLK
Sbjct: 128 EQIVDVNRDQAATEQALAALRDVVQRYPNSEYAQDARLKIDMVNDQLAGKEMTIGRYYLK 187

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
            G+ +AAI RF+ V+  +    H  EA+ RLVE+Y+ L L+DEA+   +++   +P   W
Sbjct: 188 NGQTLAAIGRFRTVIDRHQTTSHTPEALYRLVESYMTLGLLDEAKRNGAVLGYNFPGDPW 247

Query: 263 ARYVETLV 270
                 L+
Sbjct: 248 YAEAYKLL 255


>gi|221235000|ref|YP_002517436.1| ComL family lipoprotein [Caulobacter crescentus NA1000]
 gi|220964172|gb|ACL95528.1| lipoprotein, ComL family [Caulobacter crescentus NA1000]
          Length = 309

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 76/248 (30%), Positives = 131/248 (52%), Gaps = 3/248 (1%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           A+TI   +    + G   ++ +      V + R    +Y      L   N+++A +YF +
Sbjct: 14  AVTIAAVLVAASVAGCAGKAKK---PTLVYEERPVELLYSTGADRLDRGNWNEAVDYFRE 70

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
             R  P++  +R+S+LM+ +  Y   +Y +A    + +I+ YP + +  Y +YL  + Y 
Sbjct: 71  VERQHPYSEWSRRSILMTGYAHYMGNQYAEAIGDADRFISLYPGNPSAQYAFYLKAICYF 130

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
           + I DV  DQ AT+  L  +  +V+RY N+ Y   AR  + +  +QLA KE+ IGR+YLK
Sbjct: 131 EQIVDVNRDQAATEQALAALRDVVQRYPNTEYATDARLKIDMVNDQLAGKEMAIGRWYLK 190

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
            G+ +AAI RF+ V+  +    H  EA+ RLVEAY+ + L +EA+   +++   +P   W
Sbjct: 191 NGQTLAAIGRFKAVIERHQTTSHTPEALFRLVEAYLTIGLNEEAKRNGAVLGYNFPGDRW 250

Query: 263 ARYVETLV 270
                 L+
Sbjct: 251 YVDAYRLL 258


>gi|16126227|ref|NP_420791.1| competence lipoprotein ComL [Caulobacter crescentus CB15]
 gi|18202701|sp|Q9A6U9|Y1984_CAUCR RecName: Full=UPF0169 lipoprotein CC_1984; Flags: Precursor
 gi|13423451|gb|AAK23959.1| competence lipoprotein ComL, putative [Caulobacter crescentus CB15]
          Length = 305

 Score =  276 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 76/248 (30%), Positives = 131/248 (52%), Gaps = 3/248 (1%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           A+TI   +    + G   ++ +      V + R    +Y      L   N+++A +YF +
Sbjct: 10  AVTIAAVLVAASVAGCAGKAKKPTL---VYEERPVELLYSTGADRLDRGNWNEAVDYFRE 66

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
             R  P++  +R+S+LM+ +  Y   +Y +A    + +I+ YP + +  Y +YL  + Y 
Sbjct: 67  VERQHPYSEWSRRSILMTGYAHYMGNQYAEAIGDADRFISLYPGNPSAQYAFYLKAICYF 126

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
           + I DV  DQ AT+  L  +  +V+RY N+ Y   AR  + +  +QLA KE+ IGR+YLK
Sbjct: 127 EQIVDVNRDQAATEQALAALRDVVQRYPNTEYATDARLKIDMVNDQLAGKEMAIGRWYLK 186

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
            G+ +AAI RF+ V+  +    H  EA+ RLVEAY+ + L +EA+   +++   +P   W
Sbjct: 187 NGQTLAAIGRFKAVIERHQTTSHTPEALFRLVEAYLTIGLNEEAKRNGAVLGYNFPGDRW 246

Query: 263 ARYVETLV 270
                 L+
Sbjct: 247 YVDAYRLL 254


>gi|94310294|ref|YP_583504.1| hypothetical protein Rmet_1352 [Cupriavidus metallidurans CH34]
 gi|93354146|gb|ABF08235.1| DNA uptake lipoprotein [Cupriavidus metallidurans CH34]
          Length = 278

 Score =  276 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 60/248 (24%), Positives = 107/248 (43%), Gaps = 19/248 (7%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
             ++ C L+G              T      ++Y +A   L   ++++A + + +    +
Sbjct: 27  VMLSACGLLG---------DQPDETAGWSANKLYSEAKDALDGGDYTRAVKLYEKLEGRY 77

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM--- 144
           PF   A+++ + +A+  Y  G+   A +  + +I  +P   N+DY YYL G+        
Sbjct: 78  PFGRYAQQAQIDTAYANYKDGETAAALAAVDRFIQLHPSHPNIDYAYYLKGLINFNDNLG 137

Query: 145 -------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
                        D +A +        ++ RY +S Y   A   +    N LA  EV   
Sbjct: 138 WLGRFSGQDLSERDPKAARAAYDAFQILITRYPDSKYTPDATLRMQYIVNSLAQHEVHAA 197

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           RYY +RG Y+AA+ R Q  L +Y  A   EEA+  +V +Y AL + D   +   +++  Y
Sbjct: 198 RYYYRRGAYLAAVNRAQQALKDYDGAPANEEALYIMVRSYDALGMKDLRDDAARVMERNY 257

Query: 258 PQGYWARY 265
           P   + +Y
Sbjct: 258 PNSDYIKY 265



 Score = 40.9 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 37/123 (30%), Gaps = 22/123 (17%)

Query: 75  KAYEYFNQCSRDFPFAGVARKSLLMSAFV--------------QYSAGKYQQAASLGEEY 120
            AY+ F      +P +     + L   ++               Y  G Y  A +  ++ 
Sbjct: 157 AAYDAFQILITRYPDSKYTPDATLRMQYIVNSLAQHEVHAARYYYRRGAYLAAVNRAQQA 216

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +  Y  +   +   Y++  SY  +      D             +   Y NS Y+K  + 
Sbjct: 217 LKDYDGAPANEEALYIMVRSYDALGMKDLRD--------DAARVMERNYPNSDYIKYGQR 268

Query: 181 YVT 183
              
Sbjct: 269 RKD 271


>gi|253999418|ref|YP_003051481.1| outer membrane assembly lipoprotein YfiO [Methylovorus sp. SIP3-4]
 gi|253986097|gb|ACT50954.1| outer membrane assembly lipoprotein YfiO [Methylovorus sp. SIP3-4]
          Length = 268

 Score =  276 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 56/255 (21%), Positives = 111/255 (43%), Gaps = 16/255 (6%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           +  A      ++ C + G   +          T     + +Y +A   ++ +++ KA +Y
Sbjct: 3   HSLAFIAVLWLSGCAIFGAPTELDE-------TKGWSAQRIYTEADEKMRSRDYEKAIKY 55

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
           F      +P    A ++ +   +  Y         +  + +I  +P+  N+DY YY+ G+
Sbjct: 56  FETLESRYPHGRFATQAQMDKIYAYYKRNDPISTIAAADRFIKLHPDHPNIDYAYYMKGL 115

Query: 140 SYAQ---------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
           +              +    D ++ +     +  +V RY NS YVK A   +T   + LA
Sbjct: 116 ATFNERGVIEKLTKQQISDRDPKSLRESFLALKELVTRYPNSRYVKDATLRMTYLVDMLA 175

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
             E+ + RYY+KR  Y+A++ R + VL  Y D+   EEA+  ++ AY  + + D  ++ +
Sbjct: 176 NSELHVARYYMKRQAYLASVNRCKFVLETYPDSPSVEEALVIMISAYDLMGMTDLKQDTL 235

Query: 251 SLIQERYPQGYWARY 265
            ++Q  YP     + 
Sbjct: 236 RVLQTNYPDSKMLKK 250


>gi|332188478|ref|ZP_08390200.1| hypothetical protein SUS17_3597 [Sphingomonas sp. S17]
 gi|332011490|gb|EGI53573.1| hypothetical protein SUS17_3597 [Sphingomonas sp. S17]
          Length = 311

 Score =  276 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 73/235 (31%), Positives = 119/235 (50%), Gaps = 3/235 (1%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G  R  +R        DV     +Y  A   L +  + +A   F++  R  P++  AR++
Sbjct: 23  GCARNRTRTDLPYVARDVGT---LYTAAKQRLDQHRYKEAALLFDEVERQHPYSIWARRA 79

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
            LMSAF  Y    Y Q+    + ++  +P +++  Y YYL+ + Y + I+DV  DQ+ T+
Sbjct: 80  QLMSAFSYYLGRDYTQSIQSAQRFLAVHPGNRDAPYAYYLIALGYYEQIQDVTRDQKITR 139

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             L  +  ++ RY N+ Y   AR  V +  + LA KE+EIGR+Y  R +++AA  RF+ V
Sbjct: 140 QALDALGELMRRYPNTRYAADARLKVDLVNDHLAGKEMEIGRFYEDRHQWLAASMRFRTV 199

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           +  Y    H  EA+ RL E Y+AL +  EA    +++   YP   W      L++
Sbjct: 200 VDKYQTTSHTPEALMRLTETYLALGVRPEAERAAAVLGANYPGSDWYNRAYKLMR 254


>gi|85714984|ref|ZP_01045969.1| putative lipoprotein [Nitrobacter sp. Nb-311A]
 gi|85698181|gb|EAQ36053.1| putative lipoprotein [Nitrobacter sp. Nb-311A]
          Length = 298

 Score =  276 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 72/244 (29%), Positives = 126/244 (51%), Gaps = 3/244 (1%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ-NFSKAYEYFNQCSRD 86
           F++A C       + +     +         ++Y + +  + ++ +   A + F++  R+
Sbjct: 32  FTVAGCGTGPLLDKFT--AKDEQTFSDEPADKLYNEGLFLMNKEHDLKAATKKFDEVDRE 89

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
            P++  ARKSLLMSA+  Y AG Y         Y+T +P + +  Y  YL+ +S    I 
Sbjct: 90  HPYSEWARKSLLMSAYASYQAGDYDTCIGSASRYVTLHPGTPDAAYAQYLIAVSNYDQIP 149

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
           DV  DQ  T+  +  +  ++ +Y  S Y   A+  +   R+QLA KE+ IGRYY++R +Y
Sbjct: 150 DVSRDQARTEKAMHALEEVIRKYPTSEYAGEAKKKLQGARDQLAGKEMAIGRYYMERRDY 209

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
             AI R++ V+  +    H EEA+ARL EAY+A+ ++ EA+   +++   +P   W +  
Sbjct: 210 TGAINRYKTVVTRFQTTRHVEEALARLTEAYMAIGIVAEAQTAAAVLGHNFPDSRWYKDA 269

Query: 267 ETLV 270
             LV
Sbjct: 270 YNLV 273


>gi|163760778|ref|ZP_02167858.1| hypothetical protein HPDFL43_13018 [Hoeflea phototrophica DFL-43]
 gi|162282100|gb|EDQ32391.1| hypothetical protein HPDFL43_13018 [Hoeflea phototrophica DFL-43]
          Length = 288

 Score =  276 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 77/251 (30%), Positives = 132/251 (52%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           + AL I     V  LV   +             +     +Y + +  ++    ++A   F
Sbjct: 14  RVALFIAGLTGVASLVSGCQSDPDIDITAYAQTIEPADVLYNQGLANIQAGQLTEASRKF 73

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
               +  P++  ARK+++MSAF  Y  G+Y +A +    Y++ YP  ++  Y  Y+VG+S
Sbjct: 74  QAVDKQHPYSEYARKAMVMSAFTNYRQGQYSEAINTASRYLSLYPNDEDAAYAQYIVGLS 133

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
           Y + I +V  DQR +   +   + ++ER+  S YV+ ++  +   R+QLA KE+++GRYY
Sbjct: 134 YYRQIPEVTRDQRTSARAIAAFTEVIERFPESEYVEDSQAKLRYARDQLAGKEMQVGRYY 193

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           L+R E+VAA  RF+LV+  Y +    EEA+ARLVE Y A+ L  EA+   +++   +P  
Sbjct: 194 LERKEFVAAANRFRLVVERYPNTRQIEEALARLVETYYAMGLESEAQTAAAVLGHNFPDS 253

Query: 261 YWARYVETLVK 271
            W      L++
Sbjct: 254 QWYADSFNLLR 264


>gi|119775738|ref|YP_928478.1| putative lipoprotein [Shewanella amazonensis SB2B]
 gi|119768238|gb|ABM00809.1| putative lipoprotein [Shewanella amazonensis SB2B]
          Length = 283

 Score =  276 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 59/271 (21%), Positives = 106/271 (39%), Gaps = 16/271 (5%)

Query: 1   MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
           M   L        +  Y+  K +    F++A   L       S++   D V   +    +
Sbjct: 15  MEEFLTTTSKELNSSMYKFAKGSAVALFALA---LGACSSSGSQE---DLVLSQKSPEAL 68

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +A   ++  NFSKA +        FPF     +  L   +  Y      QA +  + +
Sbjct: 69  YAQARTSMELGNFSKAVKSLEALDSRFPFGAHKTQVQLDMIYAYYKLDDTPQAIANIDRF 128

Query: 121 ITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYT 170
           +   P   +VDYV Y+ G+   Q           I     D +      +   R+++ Y 
Sbjct: 129 LRLNPTHPDVDYVQYMRGLVNMQADSYLFHDMMNIDRTDRDPKNAMDAFKDFERLIKTYP 188

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
           NS Y   A   +   +N+LA   +++  YY+K   + AA  R Q V+ ++      E A+
Sbjct: 189 NSKYAADAHQRMQFLKNRLARYSIQVAEYYVKMNAWSAAAVRAQTVMESFPGTPSTERAL 248

Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             + ++Y  L      + V+ ++QE +P   
Sbjct: 249 EIMAQSYDELGQEQLKKHVLMVMQENFPANE 279


>gi|157962984|ref|YP_001503018.1| putative lipoprotein [Shewanella pealeana ATCC 700345]
 gi|157847984|gb|ABV88483.1| putative lipoprotein [Shewanella pealeana ATCC 700345]
          Length = 268

 Score =  276 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 57/271 (21%), Positives = 100/271 (36%), Gaps = 17/271 (6%)

Query: 1   MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
           M   L   +    +  +++ K    +  ++A           S     D          +
Sbjct: 1   MEKFLTITLKESNSSMHKIAKSVAVVLITLAATAC-------SSKQGEDPAMTKSSPEVL 53

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +A   ++  N+SKA          FPF     +  L   +  Y         +  + +
Sbjct: 54  YSQARTSMELGNYSKAVRSLEALDSRFPFGPHKTQVQLDLIYAYYKLDDPASGIANIDRF 113

Query: 121 ITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYT 170
           I   P  K++DYVYY+ G+   Q           I     D +A +       R+++ Y 
Sbjct: 114 IRLNPTHKDIDYVYYMRGLVNMQSDRYLFHDMLNIDRSDRDPKAAQDAFNDFDRLIKSYP 173

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
           NS Y   A+  +   +N+LA   +++  YY+K   + AA  R Q VL  Y      E+A+
Sbjct: 174 NSKYAADAQKRMQHLKNRLALYSIKVAEYYIKMNAWSAAAIRAQSVLETYPGTPSTEKAL 233

Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             +  AY  L        V+ +++  YP   
Sbjct: 234 EIMSTAYGELGQEKLKDHVLMVMKANYPNNK 264


>gi|255263345|ref|ZP_05342687.1| tetratricopeptide TPR_2 repeat protein [Thalassiobium sp. R2A62]
 gi|255105680|gb|EET48354.1| tetratricopeptide TPR_2 repeat protein [Thalassiobium sp. R2A62]
          Length = 284

 Score =  276 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 74/245 (30%), Positives = 124/245 (50%), Gaps = 3/245 (1%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           I   + V  L G     SR        +     E++++    L       A  YF +  R
Sbjct: 15  IGTVLVVGLLAGCGSFDSR---PKVPLENYSAEEIFQRGEFELNRGREDDAAFYFGEIER 71

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
            +P++  A+++L+M AF  +    Y  + S  + +I  YP  ++  Y  YL+ +SY   I
Sbjct: 72  LYPYSEWAKRALIMQAFAYHKDRDYPNSRSSAQRFIDFYPADEDAAYAQYLLALSYYDQI 131

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
            ++  DQ  T   LQ +  ++ERY +S Y + +     +  + LAAKE+EIGRYY++ G 
Sbjct: 132 DEIGRDQGLTFQALQALRTVIERYPDSEYARSSILKFDLAFDHLAAKEMEIGRYYIQDGH 191

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
           Y A+I RF+ V+ ++    H  EA+ RLVEAY++L L DEA+   +++   Y    W + 
Sbjct: 192 YAASINRFRTVVEDFQTTSHTPEALHRLVEAYLSLGLTDEAQTAGAILGHNYQSTEWYQD 251

Query: 266 VETLV 270
             +L+
Sbjct: 252 SYSLL 256


>gi|146283957|ref|YP_001174110.1| competence protein ComL [Pseudomonas stutzeri A1501]
 gi|145572162|gb|ABP81268.1| competence protein ComL [Pseudomonas stutzeri A1501]
          Length = 374

 Score =  276 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 64/244 (26%), Positives = 101/244 (41%), Gaps = 17/244 (6%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           +                + D  L  V       E+Y++A   L  ++++ A         
Sbjct: 51  LLLIAIFALTAACSSNETVDENLGEV-------ELYQQAQADLDNKSYTSAISKLKALES 103

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
            +PF   A ++ L   +  Y   + + A S  E +I  +P+  NVDY YYL G++     
Sbjct: 104 RYPFGRFAEQAQLELIYAYYRNAEPEAARSAAERFIRLHPQHPNVDYAYYLKGLASFDQD 163

Query: 146 RDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           R +            D  A +      +++  RY NS Y   A+  +   RN LAA E+ 
Sbjct: 164 RGLLARFLPLDMTKRDPGAARDSFNEFAQLTSRYPNSRYSPDAKARMIYLRNLLAANEIH 223

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           +  YYLKR  YVAA  R + V+ N+       + +A + EAY  L L D A   +  +Q 
Sbjct: 224 VAHYYLKRQAYVAAANRGRYVVENFQGTPAVADGLAVMTEAYQRLGLDDLADASLKTLQL 283

Query: 256 RYPQ 259
            YP 
Sbjct: 284 NYPD 287


>gi|313201440|ref|YP_004040098.1| outer membrane assembly lipoprotein yfio [Methylovorus sp. MP688]
 gi|312440756|gb|ADQ84862.1| outer membrane assembly lipoprotein YfiO [Methylovorus sp. MP688]
          Length = 268

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 56/255 (21%), Positives = 111/255 (43%), Gaps = 16/255 (6%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           +  A      ++ C + G   +          T     + +Y +A   ++ +++ KA +Y
Sbjct: 3   HSLAFIAVLWLSGCAIFGAPTELDE-------TKGWSAQRIYTEADEKMRSRDYEKAIKY 55

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
           F      +P    A ++ +   +  Y         +  + +I  +P+  N+DY YY+ G+
Sbjct: 56  FETLESRYPHGRFATQAQMDKIYAYYKRNDPISTIAAADRFIKLHPDHPNIDYAYYMKGL 115

Query: 140 SYAQ---------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
           +              +    D ++ +     +  +V RY NS YVK A   +T   + LA
Sbjct: 116 ATFNERGVIEKLTKQQISDRDPKSLRESFLALKELVTRYPNSRYVKDATLRMTYLVDMLA 175

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
             E+ + RYY+KR  Y+A++ R + VL  Y D+   EEA+  ++ AY  + + D  ++ +
Sbjct: 176 NSELHVARYYMKRQAYLASVNRCKFVLETYPDSPSVEEALVIMISAYDLMGMDDLKQDTL 235

Query: 251 SLIQERYPQGYWARY 265
            ++Q  YP     + 
Sbjct: 236 RVLQTNYPDSKMLKK 250


>gi|115524131|ref|YP_781042.1| putative lipoprotein [Rhodopseudomonas palustris BisA53]
 gi|115518078|gb|ABJ06062.1| putative lipoprotein [Rhodopseudomonas palustris BisA53]
          Length = 301

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 74/239 (30%), Positives = 123/239 (51%), Gaps = 3/239 (1%)

Query: 36  VGWERQS--SRDVYLDSVTDVRYQREVYEKAVLFL-KEQNFSKAYEYFNQCSRDFPFAGV 92
            G    +   + +  D         ++Y + +  + + ++   A + F +  R  P++  
Sbjct: 39  TGCGTGAIWDKFLTKDETYTDEPADKLYNEGLYLMNQSKDPKAASKKFEEVDRQHPYSDW 98

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           ARKSLLMSA+  Y AG Y         Y+T +P S +  Y  YL+  S+   I D+  DQ
Sbjct: 99  ARKSLLMSAYAYYEAGDYDNCIGSATRYVTMHPGSADAAYAQYLIAASHYDQIPDISRDQ 158

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
             T+  +  +  ++ +Y  S Y   A+  +   R+QLA KE+ +GRYY++R +Y AAI R
Sbjct: 159 GRTEKAMAALEEVIRKYPTSEYATTAKKKLEGARDQLAGKEMAVGRYYMERRDYTAAINR 218

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           F+ V+  Y    H EEA+ARL EAY+A+ ++ EA+   +++   +P   W +    LVK
Sbjct: 219 FKTVVTRYQTTRHVEEALARLTEAYMAIGIVGEAQTAAAVLGHNFPDSRWYKDAYNLVK 277


>gi|110634349|ref|YP_674557.1| putative lipoprotein [Mesorhizobium sp. BNC1]
 gi|110285333|gb|ABG63392.1| putative lipoprotein [Chelativorans sp. BNC1]
          Length = 288

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 86/235 (36%), Positives = 137/235 (58%), Gaps = 1/235 (0%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G   +   D+    V        +Y + +  L      +A   F    R  P++  ARK+
Sbjct: 31  GCNAEKDLDLST-YVEQTEPADVLYNQGLANLNAGRMREAIAKFEAVDRQHPYSEFARKA 89

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
           L+M+AF  Y  GKY +A + G+ Y+T YP S++  Y  YLVG+SY + I+DV  DQR  +
Sbjct: 90  LIMNAFANYRQGKYTEAINAGKRYVTLYPTSEDAAYAQYLVGLSYFRQIKDVTQDQREAR 149

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
           L ++ M ++V+ +  S YV  A+  +   R+QLA KE+++GRYYL+R EY+AA+ RF+ V
Sbjct: 150 LTIEAMQQVVDVWPESEYVTDAQAKIRFARDQLAGKEMQVGRYYLERREYIAAVRRFRGV 209

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           + NY +  H EEA+ARLVEAY+A+ +  EA+   +++   +P   W +   TL++
Sbjct: 210 VENYGNTRHVEEALARLVEAYLAMGIASEAQTAAAVLGHNFPDSQWYKDSYTLLQ 264


>gi|304321637|ref|YP_003855280.1| competence lipoprotein ComL [Parvularcula bermudensis HTCC2503]
 gi|303300539|gb|ADM10138.1| competence lipoprotein ComL, putative [Parvularcula bermudensis
           HTCC2503]
          Length = 308

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 79/250 (31%), Positives = 131/250 (52%), Gaps = 2/250 (0%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           K ALT   S+ +         ++ D  L  V +      +Y KA   L+ + + +A   F
Sbjct: 4   KIALTALGSVLLALGGCSNFGNAPDDRLAYVEE--PVEILYRKAADALERRRYEEAVLLF 61

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
            +  R  P++  AR+++LM A+ +Y    Y  + +  + ++  +P +K+  Y YYL  ++
Sbjct: 62  EEVERQHPYSSWARRAMLMVAYSEYLQNNYDASIASIDRFLAVHPGNKDAAYAYYLRAIN 121

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
           Y + IRDV  DQ  T   L  +  ++ RY +S Y + A   + + R+ LA KE++IGR+Y
Sbjct: 122 YYERIRDVGRDQDITAQALSALEDVIRRYPDSDYARDASLKLDLTRDHLAGKEMDIGRWY 181

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           LKR E++AAI RF  VL  Y    H  EA+ RLVEAY+ + +  EA+   +++   YP  
Sbjct: 182 LKRNEHIAAINRFNEVLTTYETTSHVPEALHRLVEAYLEMGVAFEAQRHAAILAHNYPDS 241

Query: 261 YWARYVETLV 270
            W R    ++
Sbjct: 242 NWYRDSYRML 251


>gi|73541037|ref|YP_295557.1| transmembrane protein [Ralstonia eutropha JMP134]
 gi|72118450|gb|AAZ60713.1| probable transmembrane protein [Ralstonia eutropha JMP134]
          Length = 271

 Score =  275 bits (705), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 60/250 (24%), Positives = 110/250 (44%), Gaps = 12/250 (4%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDV--RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
           A+    G    S+  +  D   +       ++Y +A   L   ++S+A + + +    +P
Sbjct: 12  AILLAGGCVMLSACGLLADQPDETAGWSANKLYSEAKDALDGGDYSRAVKLYEKLEGRYP 71

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM---- 144
           F   A+++ + +A+  Y  G+   A +  + +I  +P   N+DY YYL G+         
Sbjct: 72  FGRYAQQAQIDTAYASYKDGETAAALAAVDRFIQLHPSHPNIDYAYYLKGLINFNDNLGW 131

Query: 145 ------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
                       D +A +      + +V R+ +S Y   A   +    N LA  EV   R
Sbjct: 132 LGRFSGQDLSERDPKAARAAYDAFNTLVTRFPDSKYTPDAAARMQYIVNSLAQHEVHAAR 191

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           YY KRG Y+AA+ R Q  L +Y  A   EEA+  ++ +Y +L + D   +   +++  +P
Sbjct: 192 YYYKRGAYLAAVNRAQQALKDYDGAPANEEALYIMIRSYDSLGMKDLRDDTARVMERNFP 251

Query: 259 QGYWARYVET 268
              + +Y E 
Sbjct: 252 NSDYIKYGER 261



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 37/123 (30%), Gaps = 22/123 (17%)

Query: 75  KAYEYFNQCSRDFPFAGVARKSLLMSAFV--------------QYSAGKYQQAASLGEEY 120
            AY+ FN     FP +     +     ++               Y  G Y  A +  ++ 
Sbjct: 150 AAYDAFNTLVTRFPDSKYTPDAAARMQYIVNSLAQHEVHAARYYYKRGAYLAAVNRAQQA 209

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +  Y  +   +   Y++  SY  +      D  A          +   + NS Y+K    
Sbjct: 210 LKDYDGAPANEEALYIMIRSYDSLGMKDLRDDTA--------RVMERNFPNSDYIKYGER 261

Query: 181 YVT 183
              
Sbjct: 262 RKD 264


>gi|170748766|ref|YP_001755026.1| putative lipoprotein [Methylobacterium radiotolerans JCM 2831]
 gi|170655288|gb|ACB24343.1| putative lipoprotein [Methylobacterium radiotolerans JCM 2831]
          Length = 293

 Score =  275 bits (705), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 76/242 (31%), Positives = 130/242 (53%), Gaps = 3/242 (1%)

Query: 32  VCFLVGWERQSSR---DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
              L G +   +    + Y   V       ++Y   +  L++ ++  A + F+   + + 
Sbjct: 22  GLGLGGCDFDPTSIFAEKYKPEVVPDVPADKLYSDGLAKLEDSDYEGAVKKFDNLDKQYQ 81

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
           ++  +RK+LLM+A+  Y   KY  A S  + Y+ ++P SK+  Y  YL+ MS  + I DV
Sbjct: 82  YSEWSRKALLMTAYANYEGQKYDDAISASKRYLQRHPASKDAAYAQYLMAMSNYKQIPDV 141

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
             DQ  ++  L  +  +V++Y  S Y   A+  + + R+QLA KE+EIGR+YL++  + A
Sbjct: 142 TRDQERSEKALVALQELVQKYPTSEYAADAKAKIQITRDQLAGKEMEIGRFYLEKRNFPA 201

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           AI RF+ V+A Y    HAEEA+ RL EAY AL +  EA+   +++   +P+  W +    
Sbjct: 202 AINRFRDVVAKYQTTRHAEEALERLTEAYWALGITQEAQNAAAVLGHNFPESPWYKDAHA 261

Query: 269 LV 270
           L+
Sbjct: 262 LL 263


>gi|328542974|ref|YP_004303083.1| DNA uptake lipoprotein-like protein [polymorphum gilvum
           SL003B-26A1]
 gi|326412720|gb|ADZ69783.1| DNA uptake lipoprotein-like protein [Polymorphum gilvum
           SL003B-26A1]
          Length = 286

 Score =  275 bits (704), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 84/251 (33%), Positives = 137/251 (54%), Gaps = 3/251 (1%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           K A+ +   + V  L      S +D   D   D      ++ + +        S A + F
Sbjct: 15  KVAVLLRSLVLVSALALGACASDKD---DLALDDTPAEVLFNEGLALRNAGRLSDAGKKF 71

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
           ++  + +P++  ARKSL+  AF+ +S G+Y +A +  E + T YP S++  Y  Y++G S
Sbjct: 72  SELDKLYPYSEYARKSLINLAFINFSLGRYPEAIAASERFTTLYPGSEDSAYALYIIGQS 131

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
           Y + I DV  DQ  T+  L  ++ ++ RY +S Y   A+  V V  +QLA KE+++GRYY
Sbjct: 132 YFRQIPDVTRDQEQTEKALSALNELIRRYPDSEYTADAKSKVLVAYDQLAGKEMQVGRYY 191

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           L R  Y+AAI RF++V+ NY    H EEA+ RL E+Y AL +++EA+   +++   YP  
Sbjct: 192 LDRRNYIAAINRFKMVVINYQTTRHVEEALFRLTESYYALGVVNEAQTAAAVLGHNYPDS 251

Query: 261 YWARYVETLVK 271
            W +    L+K
Sbjct: 252 RWYKDAFALLK 262


>gi|163750157|ref|ZP_02157400.1| hypothetical protein KT99_20856 [Shewanella benthica KT99]
 gi|161330214|gb|EDQ01196.1| hypothetical protein KT99_20856 [Shewanella benthica KT99]
          Length = 269

 Score =  275 bits (704), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 56/271 (20%), Positives = 102/271 (37%), Gaps = 17/271 (6%)

Query: 1   MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
           M  +L   +   +   ++  K A+   FSIA   +         ++  +     R    +
Sbjct: 1   MEKILTTTLKESKLSMHKFAKGAVLALFSIA---ITACSSSPDEELKANK----RSPDVL 53

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +A   ++  NFSKA          +PF     +  L   +  Y         +  + +
Sbjct: 54  YSQARTSMELGNFSKAVRSLEALDSRYPFGPHKTQVQLDLIYAYYKLDDPASGIANIDRF 113

Query: 121 ITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYT 170
           I   P  K++DYVYY+ G+   Q           I     D +  +   +   R+++ Y 
Sbjct: 114 IRLNPTHKDIDYVYYMRGLVNMQSDSYMFHDMLNIDRTDRDPKVAQDAFKDFDRLIKSYP 173

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
           NS Y   A   +   +N+LA   + +  YY+K   + AA  R Q V+  Y      E A+
Sbjct: 174 NSKYAYDAAQRMQFLKNRLAKYSINVAEYYMKMNAWSAAAIRAQSVMETYPGTPSTEHAL 233

Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             + +AY  L         +++++  Y    
Sbjct: 234 EIMADAYGELGQEKLKENTLTVMKANYLGNK 264


>gi|170744725|ref|YP_001773380.1| putative lipoprotein [Methylobacterium sp. 4-46]
 gi|168198999|gb|ACA20946.1| putative lipoprotein [Methylobacterium sp. 4-46]
          Length = 298

 Score =  275 bits (704), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 73/252 (28%), Positives = 136/252 (53%), Gaps = 5/252 (1%)

Query: 25  TIFFSIAVCFLVGWERQSS-----RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
               +     L   +   S      + Y   V + R   ++Y + +  L++ ++ +A + 
Sbjct: 17  VALLAACGAGLSACDALDSINPFGPEKYKPEVIERRPADKIYSEGLAKLEDHDYDEAVKR 76

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
           F    +++ ++  +RK++LM+A+  Y   KY+ A +  + Y+ ++P SK+  Y  Y++ M
Sbjct: 77  FQNLDKEYAYSDWSRKAVLMTAYANYEGAKYEDAITAAKRYLQRHPGSKDAAYAQYILAM 136

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           S+ + I DV  DQ  ++  L  +  +V++Y  S Y   A+  + + R+QLA KE+ +GRY
Sbjct: 137 SHYKQIPDVTRDQERSERALAALQELVQKYPTSEYAADAKAKIQITRDQLAGKEMTVGRY 196

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           YL R  + AAI RF+ V++ Y    HAEEA+ RL EAY+AL ++ EA+   +++   +P 
Sbjct: 197 YLDRRNFPAAINRFREVVSKYQTTRHAEEALERLAEAYMALGIVAEAQTAAAVLAHNFPD 256

Query: 260 GYWARYVETLVK 271
             W +    L++
Sbjct: 257 SPWYKDAYALLQ 268


>gi|309378793|emb|CBX22619.1| competence lipoprotein ComL [Neisseria lactamica Y92-1009]
          Length = 268

 Score =  275 bits (704), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 59/259 (22%), Positives = 114/259 (44%), Gaps = 13/259 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K  L +  S+A+C     +    +D      T      ++Y +A   L   N+++A +
Sbjct: 1   MKKILLMVSLSLALCACASSQGTVDKDT---QTTQGWGVEKLYAEAQDELGGGNYTRAVK 57

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            +      FP    A+++LL +A+  Y   +  +A +  + +   YP+  N+DY  YL G
Sbjct: 58  LYEILGSRFPTGRYAQQALLDTAYAYYKDDEKDKALAAIDRFRNLYPQHPNMDYALYLRG 117

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +      +              D +A +   Q  + +V R+ +S Y   A   +    + 
Sbjct: 118 LVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVRRFPDSKYAADASARMIKLVDA 177

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           L   E+ + RYY+KRG Y+AA  R Q ++ +Y +  + EE++A L  AY  L     A +
Sbjct: 178 LGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESLAILELAYQKLGKPQLAAD 237

Query: 249 VVSLIQERYPQGYWARYVE 267
              +++  +P+  +  +  
Sbjct: 238 TRRVLETNFPKSPFLTHAW 256


>gi|222149127|ref|YP_002550084.1| hypothetical protein Avi_2880 [Agrobacterium vitis S4]
 gi|221736112|gb|ACM37075.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 289

 Score =  275 bits (703), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 87/249 (34%), Positives = 143/249 (57%), Gaps = 1/249 (0%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSV-TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           L +  SIA    +     + +D+ +  +  +      +Y + +  +K  N ++A   F+ 
Sbjct: 16  LAVCLSIAGVAPLLSACNTDKDIDITKLGAETDPPETLYNQGLANIKAGNLAEASRKFDA 75

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
             +  PF+  ++K+L+MS FV+Y  GKY +A S G  Y+T YP +K+  YV YL+G+S  
Sbjct: 76  VDKQNPFSDWSQKALVMSTFVKYRQGKYTEAISTGTRYMTLYPSTKDSAYVQYLIGLSNW 135

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
           + I +V  DQ+ +   L+ M ++V+ Y  S YV  A+  +   R+QLA KE++IGRYYL+
Sbjct: 136 RQIPNVTQDQKFSSRTLEAMDKVVKNYPTSEYVSDAQEKMRFARDQLAGKEMQIGRYYLE 195

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           R EY+A+I RF+ V+  Y      EEA+ARLVEAY A+ ++ EA+   +++   YP   W
Sbjct: 196 RKEYLASIQRFRNVVEQYPTTNQIEEALARLVEAYYAMGVVQEAQTAAAVLGHNYPDSKW 255

Query: 263 ARYVETLVK 271
            +    L+K
Sbjct: 256 YKDSFELLK 264


>gi|240850884|ref|YP_002972284.1| competence lipoprotein ComL precursor [Bartonella grahamii as4aup]
 gi|240268007|gb|ACS51595.1| competence lipoprotein ComL precursor [Bartonella grahamii as4aup]
          Length = 297

 Score =  275 bits (703), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 87/256 (33%), Positives = 136/256 (53%), Gaps = 1/256 (0%)

Query: 17  YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDS-VTDVRYQREVYEKAVLFLKEQNFSK 75
           + + +  L +    + C L G   +    +   + V  +     +Y +A+  L+      
Sbjct: 16  FNIVRKILGVVLLGSTCMLAGCLFKEKNTLDPSAYVLKIEPPDVLYNQALASLESGKLGD 75

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A + F +  + + +    RKSL+M AF  Y  GKY  + S+ + YIT YP S +  Y YY
Sbjct: 76  ASKKFLKIEKQYAYTDWGRKSLVMGAFTNYRLGKYDDSISMAQRYITLYPGSTDSAYAYY 135

Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           ++G+S  + I DV  DQR TK  +  M  ++ERY NS YVK A+  +  GR QLA KE++
Sbjct: 136 IIGLSSFRRIPDVTRDQRDTKRAIAAMQLLIERYPNSEYVKDAKDKIRFGREQLAGKEMQ 195

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           IGRYY +   Y+AA  RF+ V+  YSD    EEA+ RL E  +AL L  EA+   +++  
Sbjct: 196 IGRYYEEGRRYLAASRRFRTVVEEYSDTNQIEEALFRLTEVNLALGLTAEAQTAAAILGR 255

Query: 256 RYPQGYWARYVETLVK 271
            YP+  W ++   L++
Sbjct: 256 NYPKSEWYKFSYNLLQ 271


>gi|91775966|ref|YP_545722.1| putative competence lipoprotein precursor [Methylobacillus
           flagellatus KT]
 gi|91709953|gb|ABE49881.1| putative competence lipoprotein precursor [Methylobacillus
           flagellatus KT]
          Length = 267

 Score =  275 bits (703), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 63/250 (25%), Positives = 107/250 (42%), Gaps = 16/250 (6%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           +  AL     +  C + G   +          T     + +Y  AV  +  +++ KA +Y
Sbjct: 3   HSLALIAVLWLTGCAIFGAPTELDE-------TKGWPVQRIYAAAVENMTTRDYEKAIKY 55

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
           F      +P    A +S L   +  Y         +  + +I  +P   NVDY YY+ G+
Sbjct: 56  FQILESRYPHGRYATQSQLEVIYAHYKKNDPAATMAAADRFIKLHPNHPNVDYAYYMKGL 115

Query: 140 SYAQ---------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
           +              +    D ++ +     +  +V R+ NS YVK A   ++   N LA
Sbjct: 116 ATFNERGIIEKLTKQQISDRDPKSLRESFLALKELVNRFPNSRYVKDATLRMSYLVNSLA 175

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
             E+ + RYY+KR  YVAA  R + V+  Y D  H EEA+  L+ AY A+++ D   +  
Sbjct: 176 QHELHVARYYMKRQAYVAAANRCKYVMEFYPDTPHIEEALVILISAYDAMSMDDLRDDAK 235

Query: 251 SLIQERYPQG 260
            ++ + YP  
Sbjct: 236 RVLAQNYPNS 245


>gi|82703096|ref|YP_412662.1| TPR repeat-containing protein [Nitrosospira multiformis ATCC 25196]
 gi|82411161|gb|ABB75270.1| TPR repeat [Nitrosospira multiformis ATCC 25196]
          Length = 266

 Score =  274 bits (702), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 57/231 (24%), Positives = 98/231 (42%), Gaps = 14/231 (6%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
             T      + Y +A   L + N++ A + F      +P+   A+++ L   +  Y  G+
Sbjct: 24  EDTKAWSASKYYTEAKSELNDGNYAAAIKLFEALEARYPYGRYAQQAQLEIGYAHYKDGE 83

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI--------------RDVPYDQRAT 155
              A +  + +I  +P   NVDY YYL G++                        D +A+
Sbjct: 84  QALAIAAADRFIKLHPNHPNVDYAYYLKGLANFNDDLGLMGIVTEKILNQDMSERDPKAS 143

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
               +    +V R+  S Y   A   +    N +A  E+++ RYY+KRG YVAA  R Q 
Sbjct: 144 HESFENFKELVNRFPKSKYAPDAVQRMKHLVNVVALNEIQVARYYMKRGGYVAAANRAQY 203

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
            L  Y      EEA+  +V+AY AL + D   +   ++++ +P   +    
Sbjct: 204 ALKEYPQTPATEEALFIMVKAYDALGMTDLRDDADRVMRKNFPNSRFLSDS 254


>gi|261400384|ref|ZP_05986509.1| competence lipoprotein ComL [Neisseria lactamica ATCC 23970]
 gi|269209821|gb|EEZ76276.1| competence lipoprotein ComL [Neisseria lactamica ATCC 23970]
          Length = 268

 Score =  274 bits (702), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 59/254 (23%), Positives = 113/254 (44%), Gaps = 13/254 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K  L +  S+A+C     +    +D      T      ++Y +A   L   N+++A +
Sbjct: 1   MKKILLMVSLSLALCACASSQGTVDKDT---QTTQGWGVEKLYAEAQDELGGGNYTRAVK 57

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            +      FP    A+++LL +A+  Y   +  +A +  + +   YP+  N+DY  YL G
Sbjct: 58  LYEILGSRFPTGRYAQQALLDTAYAYYKDDEKDKALAAIDRFRNLYPQHPNMDYALYLRG 117

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +      +              D +A +   Q  + +V R+ +S Y   A   +    + 
Sbjct: 118 LVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVRRFPDSKYAADASARMIKLVDA 177

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           L   E+ + RYY+KRG Y+AA  R Q ++ +Y +  + EE++A L  AY  L     A +
Sbjct: 178 LGGNEMAVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESLAILELAYQKLGKPQLAAD 237

Query: 249 VVSLIQERYPQGYW 262
              +++  +P+  +
Sbjct: 238 TRRVLETNFPKSPF 251


>gi|325293455|ref|YP_004279319.1| lipoprotein [Agrobacterium sp. H13-3]
 gi|325061308|gb|ADY64999.1| lipoprotein [Agrobacterium sp. H13-3]
          Length = 288

 Score =  274 bits (702), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 79/253 (31%), Positives = 138/253 (54%), Gaps = 1/253 (0%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +   A+++    A   +   +     D+    V +      +Y++ +  +   N ++A  
Sbjct: 13  MRGIAVSLMLVGASVAVTACQSDPDIDITKLGV-ETDPPDVLYKQGLANMNAGNMTEASR 71

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            F    + +PF    +K+L+M  F+     K   A + G  ++ QYP SK+  YV Y++G
Sbjct: 72  KFEAIDKQYPFTEWGQKALVMQTFIATRTNKNDVAIASGSRFLRQYPRSKDAAYVQYMIG 131

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           ++Y++ I DV  DQRA +  ++ MS++V  Y +S YV  A+  +   R+QLA +E+++GR
Sbjct: 132 LAYSKQISDVTQDQRAAQRTVEAMSKVVNDYPDSEYVADAQAKIRFARDQLAGREMQVGR 191

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           YYL+R EY+AA+ RF++V+  Y +    EEA+ARL E+Y A+ L DEA+   +++   YP
Sbjct: 192 YYLERKEYLAAVSRFRIVVEQYQNTNQIEEALARLTESYYAMGLSDEAQTAAAVLGNNYP 251

Query: 259 QGYWARYVETLVK 271
              W      L+K
Sbjct: 252 DSQWYADSYKLLK 264


>gi|222086434|ref|YP_002544968.1| hypothetical protein Arad_2982 [Agrobacterium radiobacter K84]
 gi|221723882|gb|ACM27038.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 289

 Score =  274 bits (701), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 93/255 (36%), Positives = 147/255 (57%), Gaps = 1/255 (0%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSV-TDVRYQREVYEKAVLFLKEQNFSKA 76
           ++   AL +   +A    V     + +D+ +  +  +      +Y + +  +K  N ++A
Sbjct: 10  KITARALLVSLLLAGTGAVVTGCNTDKDIDISKLGVETDPPETLYNQGLANIKAGNMAEA 69

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
              F+  ++  PF+  ARK+L+MS FV+Y  G+Y  A   G  Y+ QYP S++ DYV YL
Sbjct: 70  GRKFDAINQQQPFSEWARKALVMSTFVKYRTGRYDDAVQSGNSYLKQYPGSEDADYVQYL 129

Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
           VG SYA+ I  V  DQRA +  ++ MS++V  Y +S YV  A+  +   R+QLA KE++I
Sbjct: 130 VGSSYAKQIVSVTQDQRAAQQTIEAMSKVVTNYPSSQYVSDAQAKIRFARDQLAGKEMQI 189

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           GRYYL+R +Y+AAI RF++V+  Y      EEA+ARLVEAY A+ ++ EA+   +++   
Sbjct: 190 GRYYLERKDYLAAISRFRIVIEQYPTTNQIEEALARLVEAYYAMGIVQEAQTAAAVLGHN 249

Query: 257 YPQGYWARYVETLVK 271
           YP   W      L+K
Sbjct: 250 YPDSRWYADSFKLLK 264


>gi|313668817|ref|YP_004049101.1| competence lipoprotein [Neisseria lactamica ST-640]
 gi|313006279|emb|CBN87742.1| competence lipoprotein [Neisseria lactamica 020-06]
          Length = 268

 Score =  274 bits (701), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 59/259 (22%), Positives = 114/259 (44%), Gaps = 13/259 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K  L +  S+A+C     +    +D      T      ++Y +A   L   N+++A +
Sbjct: 1   MKKILLMVSLSLALCACASSQGTVDKDT---QTTQGWGVEKLYAEAQDELGGGNYTRAVK 57

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            +      FP    A+++LL +A+  Y   +  +A +  + +   YP+  N+DY  YL G
Sbjct: 58  LYEILGSRFPTGRYAQQALLDTAYAYYKDDEKDKALAAIDRFRNLYPQHPNMDYALYLRG 117

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +      +              D +A +   Q  + +V R+ +S Y   A   +    + 
Sbjct: 118 LVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVRRFPDSKYAADASARMIKLVDA 177

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           L   E+ + RYY+KRG Y+AA  R Q ++ +Y +  + EE++A L  AY  L     A +
Sbjct: 178 LGGNEMAVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESLAILELAYQKLGKPQLAAD 237

Query: 249 VVSLIQERYPQGYWARYVE 267
              +++  +P+  +  +  
Sbjct: 238 TRRVLETNFPKSPFLTHAW 256


>gi|307293329|ref|ZP_07573175.1| outer membrane assembly lipoprotein YfiO [Sphingobium
           chlorophenolicum L-1]
 gi|306881395|gb|EFN12611.1| outer membrane assembly lipoprotein YfiO [Sphingobium
           chlorophenolicum L-1]
          Length = 261

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 68/236 (28%), Positives = 120/236 (50%), Gaps = 3/236 (1%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
            G     ++        DV     +Y      L    +  A   F++  R  P++  AR+
Sbjct: 23  SGCATSKNKADTQYVARDVST---LYNAGKYRLDRGQYKLAAALFDEVERQHPYSPWARR 79

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           + LMSAF  Y    Y ++    + +++ +  +K+  Y YYL+ + Y + I DV  DQ+ T
Sbjct: 80  AQLMSAFSYYMNKDYPESIGASQRFLSIHTGNKDAPYAYYLIALCYYEQIADVTRDQKVT 139

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           +  L  +  ++ RY ++ Y   AR  + +  + LA KE+EIGR+Y +RG+++AA  RF+ 
Sbjct: 140 QQALDALGELIRRYPDTRYAADARLKLDLVNDHLAGKEMEIGRFYQRRGQWLAATLRFRT 199

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           V+  Y    H  EA+ RLVE+Y++L +  EA++  +++   YP   W      L++
Sbjct: 200 VIDKYQTTTHTPEALERLVESYLSLGIPAEAQKAAAVLGRNYPGSKWYERSHKLMR 255


>gi|254460220|ref|ZP_05073636.1| competence lipoprotein ComL [Rhodobacterales bacterium HTCC2083]
 gi|206676809|gb|EDZ41296.1| competence lipoprotein ComL [Rhodobacteraceae bacterium HTCC2083]
          Length = 289

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 73/261 (27%), Positives = 126/261 (48%), Gaps = 1/261 (0%)

Query: 11  IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLK 69
           +           A  +  ++A C   G    S       ++  D     ++YE+    L+
Sbjct: 1   MKRKSVRHALTVATVLTLTVAGCSGGGGGGVSRFLGGKSTIPLDTFTAEQIYERGEFELE 60

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
            +    A  YF +  R +P++  A++ L+M AF  +    Y+ + +  + +I  YP   +
Sbjct: 61  RKRDDDAAFYFGEVERLYPYSEWAKRGLIMQAFAYHKDKDYENSRASAQRFIDVYPTDDD 120

Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
             Y  YL+ +SY   I D+  DQ  T   LQ +  ++ERY +S Y   A     +  + L
Sbjct: 121 AAYAQYLLALSYYDQIEDLGRDQGLTFQALQGLRTVIERYPDSEYTSSAILKFDLAFDHL 180

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           A KE+EIGRYYL+R  Y ++I RF++V+ ++    H  EA+ RLVE+Y++L L +EA+  
Sbjct: 181 AGKEMEIGRYYLRRDHYTSSINRFRVVVEDFQTTTHTPEALHRLVESYLSLGLNEEAQTA 240

Query: 250 VSLIQERYPQGYWARYVETLV 270
            +++   Y    W      L+
Sbjct: 241 GAILGHNYKSTEWYEDSFKLL 261


>gi|15965919|ref|NP_386272.1| hypothetical protein SMc01876 [Sinorhizobium meliloti 1021]
 gi|307308229|ref|ZP_07587938.1| outer membrane assembly lipoprotein YfiO [Sinorhizobium meliloti
           BL225C]
 gi|307319696|ref|ZP_07599121.1| outer membrane assembly lipoprotein YfiO [Sinorhizobium meliloti
           AK83]
 gi|15075188|emb|CAC46745.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
 gi|306894627|gb|EFN25388.1| outer membrane assembly lipoprotein YfiO [Sinorhizobium meliloti
           AK83]
 gi|306901227|gb|EFN31833.1| outer membrane assembly lipoprotein YfiO [Sinorhizobium meliloti
           BL225C]
          Length = 288

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 78/240 (32%), Positives = 126/240 (52%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
              L+   +            +      +Y + +  L     ++A   F    +  PF+ 
Sbjct: 25  GSSLITACQNDPDIDITKLTAETDPPDVLYNQGLANLNAGKTTEAARKFEAIDKQHPFSE 84

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
            ARK+L+M+AFV Y  G+YQ A +    Y+  YP+S++  Y  Y+ G++Y + I  V  D
Sbjct: 85  YARKALVMNAFVAYRNGQYQDAINSTNRYLNLYPQSEDAAYAQYIQGLAYTKQIPSVTQD 144

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           QR     ++ M  +V++Y +S YV  A+  +   R+QLA KE+++GRYYL+R EY+AAI 
Sbjct: 145 QRPAAKAIEAMQVVVDKYPDSEYVDDAQAKIRFARDQLAGKEMQVGRYYLERKEYLAAIS 204

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           RF+ V+  Y      EEA+ARLVEAY A+ +  EA+   +++   YP   W      L++
Sbjct: 205 RFRTVVERYPTTNQVEEALARLVEAYYAMGVTGEAQTAAAVLGHNYPDSQWYADSYKLLQ 264


>gi|329902612|ref|ZP_08273173.1| putative component of the lipoprotein assembly complex (forms a
           complex with YaeT, YfgL, and NlpB) [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327548720|gb|EGF33363.1| putative component of the lipoprotein assembly complex (forms a
           complex with YaeT, YfgL, and NlpB) [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 265

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 62/258 (24%), Positives = 114/258 (44%), Gaps = 20/258 (7%)

Query: 18  QLYKFA-LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
           +L K A L + F+I+ C L+  +   +++             ++Y +A   +   N+   
Sbjct: 4   KLLKCAALALVFTISACGLLPEKIDETKN---------WSAAKLYAEARDEISTGNYETG 54

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            +Y+ +    +PF   A+++ +  A+  Y      QA +  E +I  +P   NVDY+YYL
Sbjct: 55  IKYYERLESRYPFGTFAQQAQMEVAYAYYRQSDQAQALAAVERFIKLHPNHPNVDYMYYL 114

Query: 137 VGMSYAQ----------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
            G+                     D +A     +   ++VER+ +S Y   AR  +    
Sbjct: 115 RGLINFNDKLGLFDFVSRQDATERDPKAAHEAFESFKQLVERFPDSIYAADARLRMKYLV 174

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
           N +A  EV +  YY +RG YVAA+ R Q  +  Y  A   EEA+  +  +Y  L + +  
Sbjct: 175 NAIAQHEVHVANYYFRRGAYVAAVNRAQFAVKEYPTAPATEEALFVMTRSYDELGMPELR 234

Query: 247 REVVSLIQERYPQGYWAR 264
            +   ++++ +P   + R
Sbjct: 235 DDAGRVMKQNFPNSVYYR 252


>gi|150397273|ref|YP_001327740.1| hypothetical protein Smed_2072 [Sinorhizobium medicae WSM419]
 gi|150028788|gb|ABR60905.1| conserved hypothetical transmembrane protein [Sinorhizobium medicae
           WSM419]
          Length = 288

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 78/240 (32%), Positives = 126/240 (52%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
              L+   +            +      +Y + +  L     ++A   F    +  PF+ 
Sbjct: 25  GSSLITACQNDPDIDITKLTAETDPPEVLYNQGLANLNAGKTTEAARKFEAIDKQHPFSE 84

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
            ARK+L+M+AFV Y  G+YQ A +    Y+  YP+S++  Y  Y+ G++Y + I  V  D
Sbjct: 85  YARKALVMNAFVSYRNGQYQDAINSTNRYLNLYPQSEDAAYAQYIQGLAYTKQIPSVTQD 144

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           QR     ++ M  +V++Y +S YV  A+  +   R+QLA KE+++GRYYL+R EY+AAI 
Sbjct: 145 QRPAMRAMEAMQVVVDKYPDSEYVDDAQAKIRFARDQLAGKEMQVGRYYLERKEYLAAIS 204

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           RF+ V+  Y      EEA+ARLVEAY A+ +  EA+   +++   YP   W      L++
Sbjct: 205 RFRTVVERYPTTNQVEEALARLVEAYYAMGVTGEAQTAAAVLGHNYPDSQWYADSYKLLQ 264


>gi|307944886|ref|ZP_07660223.1| lipoprotein [Roseibium sp. TrichSKD4]
 gi|307771810|gb|EFO31034.1| lipoprotein [Roseibium sp. TrichSKD4]
          Length = 288

 Score =  273 bits (700), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 79/252 (31%), Positives = 131/252 (51%), Gaps = 8/252 (3%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           L   ALTI   +A C        SS     D   D      +Y + +    +     A  
Sbjct: 20  LKIMALTIPLGLAAC--------SSTKDTEDFALDDTPPEVLYNEGLALRAQGKLKDADA 71

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            F Q  + +P++  A+KSL+  A++ YS GKY +A +  + ++T YP + +  Y  Y++G
Sbjct: 72  KFQQLDKLYPYSEYAKKSLVNMAYINYSRGKYPEAINAAQRFVTLYPGNDDSAYALYIIG 131

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
            SY + + D+  DQ  T+      S +++RY +S Y   A   +   ++QLA KE+++GR
Sbjct: 132 QSYFKQMPDISRDQAVTRKAASAYSELLQRYPDSEYSPDAETKLIAVKDQLAGKEMQVGR 191

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           YYLK+  Y+A I RF+ V+  Y    H EEA+ RL EAY AL +++EA+   +++   +P
Sbjct: 192 YYLKKRNYIAGINRFKTVVLQYQTTRHVEEALFRLTEAYFALGVVNEAQTAAAVLGHNFP 251

Query: 259 QGYWARYVETLV 270
              W +   +L+
Sbjct: 252 DTQWYKDAYSLL 263


>gi|332141866|ref|YP_004427604.1| Competence lipoprotein ComL [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327551888|gb|AEA98606.1| Competence lipoprotein ComL [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 254

 Score =  273 bits (700), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 54/254 (21%), Positives = 115/254 (45%), Gaps = 12/254 (4%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +  F L     +    +V     SS D    +V      +++Y++A   ++  NFS A +
Sbjct: 1   MKSFRLLAPVLLGA--MVSVAGCSSSDKEEKAVLANMGAQQLYDRAKQSMEVGNFSAAAQ 58

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
             +     +PF  ++ +  L   +  Y +GK ++  +  + +I   P   +VDY YY+ G
Sbjct: 59  TLSALDSRYPFGPLSHQVQLDLIYSYYKSGKNEETLATIDRFIRLNPNHSDVDYAYYMRG 118

Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++  +           I     D   ++   +   R++++Y +S Y   A+  +   +++
Sbjct: 119 LTNMESDSNLFQELMNIDRTDRDPSKSRQAFEDFRRLIQQYPDSKYAADAKQRMVHIKDR 178

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E+ I R+Y++R  YVAA  R + V+ ++ +    ++A+  +V +Y  L L +    
Sbjct: 179 LARYEIAIARFYMRRQAYVAAANRGRYVIEHFPNTTQVQQALEIMVSSYEQLGLKELRDN 238

Query: 249 VVSLIQERYPQGYW 262
            +  ++  YP   +
Sbjct: 239 AMKTLKLNYPDSEF 252


>gi|294011614|ref|YP_003545074.1| putative lipoprotein [Sphingobium japonicum UT26S]
 gi|292674944|dbj|BAI96462.1| putative lipoprotein [Sphingobium japonicum UT26S]
          Length = 261

 Score =  273 bits (700), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 68/236 (28%), Positives = 120/236 (50%), Gaps = 3/236 (1%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
            G     ++        DV     +Y      L    +  A   F++  R  P++  AR+
Sbjct: 23  SGCATSKNKADTQYVARDVST---LYNAGKYRLDRGQYKLAAALFDEVERQHPYSPWARR 79

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           + LMSAF  Y    Y ++    + +++ +  +K+  Y YYL+ + Y + I DV  DQ+ T
Sbjct: 80  AQLMSAFSYYMNQDYPESIGAAQRFLSIHTGNKDAPYAYYLIALCYYEQIADVTRDQKIT 139

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           +  L  +  ++ RY ++ Y   AR  + +  + LA KE+EIGR+Y +RG+++AA  RF+ 
Sbjct: 140 QQALDALGELIRRYPDTRYAADARLKLDLVNDHLAGKEMEIGRFYQRRGQWLAATLRFRT 199

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           V+  Y    H  EA+ RLVE+Y++L +  EA++  +++   YP   W      L++
Sbjct: 200 VIDKYQTTTHTPEALERLVESYLSLGIPAEAQKAAAVLGRNYPGSKWYERSYKLMR 255


>gi|332307417|ref|YP_004435268.1| outer membrane assembly lipoprotein YfiO [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332174746|gb|AEE24000.1| outer membrane assembly lipoprotein YfiO [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 255

 Score =  273 bits (700), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 62/255 (24%), Positives = 115/255 (45%), Gaps = 14/255 (5%)

Query: 19  LYKFALT-IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           + K +L  +F + A+  L G       +     V + R  + +YE A   +   NF+ A 
Sbjct: 2   MRKLSLPKVFLAAAIIALGGCSSSLDEEEV---VVNNRSAQSLYEDAKEKMAIGNFNAAT 58

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
              +     +PF  ++ +  L   +  Y +GK  +A S  + +    P   +VDY  Y+ 
Sbjct: 59  ATLSALDSRYPFGPLSNQVQLDLIYAYYKSGKVNEAISTIDRFTRLNPNHADVDYAIYMR 118

Query: 138 GMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           G++  +           I     D   ++   +   R++E++ +S Y   A+  +   ++
Sbjct: 119 GLTNMESDKNLFQELVGIDRSDRDPSKSREAFEDFRRLIEKFPDSKYAADAQKRMLHIKS 178

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
           +LA  E+ I R+Y++R  YVAA  R + VL  Y D +H +EA+  +VE Y  L L +   
Sbjct: 179 RLAKYEIAIARFYMRREAYVAAANRGRYVLEYYPDTDHVQEALEIMVECYDQLKLDELKN 238

Query: 248 EVVSLIQERYPQGYW 262
            V+  ++  YP   +
Sbjct: 239 NVMKTLKLNYPDSSF 253


>gi|212636675|ref|YP_002313200.1| hypothetical protein swp_3941 [Shewanella piezotolerans WP3]
 gi|212558159|gb|ACJ30613.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
          Length = 276

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 59/271 (21%), Positives = 102/271 (37%), Gaps = 17/271 (6%)

Query: 1   MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
           M   L   +    +  +++ K    +  S+AV          S     D          +
Sbjct: 8   MEKFLTITLKESNSSMHKIAKSVAVVLISLAVTAC-------SSKQGEDPAMIKSSPEVL 60

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +A   ++  N+SKA          FPF     +  L   F  Y         +  + +
Sbjct: 61  YSQARTSMELGNYSKAVRSLEALDSRFPFGPHKTQVQLDLIFAYYKLDDPASGIANIDRF 120

Query: 121 ITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYT 170
           I   P  K++DYVYY+ G+   Q           I     D +A +   +   R+V+ Y 
Sbjct: 121 IRLNPTHKDIDYVYYMRGLVNMQSDRYLFHDMLNIDRSDRDPKAAQDAFKDFDRLVKAYP 180

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
           NS Y   A+  +   +N+LA   +++  YY+K   + AA  R QLV+  +      E A+
Sbjct: 181 NSKYAADAQKRMQHLKNRLALYSIKVAEYYIKMNAWSAAAIRAQLVMEGFPGTPSTERAL 240

Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             + +AY  L         + ++Q  +P   
Sbjct: 241 EIMSQAYGELGQDKLKEHTLMVMQANFPDNK 271


>gi|300312308|ref|YP_003776400.1| transmembrane protein [Herbaspirillum seropedicae SmR1]
 gi|300075093|gb|ADJ64492.1| transmembrane protein [Herbaspirillum seropedicae SmR1]
          Length = 266

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 102/255 (40%), Gaps = 14/255 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           ++K  L  F       L        +       T      ++Y +A   L    + KA +
Sbjct: 1   MHKILLKFFIIGFALSLTACGLLPEQKDE----TTGWSAAKLYSEAKDELNAGGYDKAIK 56

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
           YF +    +PF   A+++ +  A+  Y   +  Q  +  + +I  +P   NVDY+YYL G
Sbjct: 57  YFEKLESRYPFGTYAQQAQMDIAYAYYRQNEQAQGLAAVDRFIKLHPNHPNVDYMYYLRG 116

Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +                 +   D +A +        + ER+ +S Y   A   +    N 
Sbjct: 117 LINFNDRTSIFDTFTDQDNTERDPKAMRDAFDSFKLLAERFPDSKYTPDAIARMKYLVNA 176

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           ++  +V +  YY +RG YV+A  R Q  +  Y D+   EEA+  L+ +Y AL       +
Sbjct: 177 MSQYDVHVASYYFRRGAYVSAANRAQSAIKQYPDSPANEEALFILMRSYEALGQTKLKED 236

Query: 249 VVSLIQERYPQGYWA 263
              +IQ  YP   W 
Sbjct: 237 TERIIQATYPNSPWY 251


>gi|109897659|ref|YP_660914.1| putative lipoprotein [Pseudoalteromonas atlantica T6c]
 gi|109699940|gb|ABG39860.1| putative lipoprotein [Pseudoalteromonas atlantica T6c]
          Length = 255

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 62/255 (24%), Positives = 115/255 (45%), Gaps = 14/255 (5%)

Query: 19  LYKFALT-IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           + K +L  IF + A+  L G       +     V + R  + +YE A   +   NF+ A 
Sbjct: 2   MRKLSLPKIFLAAAIIALGGCSSSPDEEEV---VVNNRSAQSLYEDAKEKMAIGNFNAAT 58

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
              +     +PF  ++ +  L   +  Y +GK  +A S  + +    P   +VDY  Y+ 
Sbjct: 59  ATLSALDSRYPFGPLSNQVQLDLIYAYYKSGKVNEAISTIDRFTRLNPNHADVDYAIYMR 118

Query: 138 GMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           G++  +           I     D   ++   +   R++++Y +S Y   A+  +   ++
Sbjct: 119 GLTNMESDKNLFQELVGIDRSDRDPSKSREAFEDFRRLIDKYPDSKYAADAQKRMLHIKS 178

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
           +LA  E+ I R+Y++R  +VAA  R + VL  Y D +H +EA+  +VE Y  L L +   
Sbjct: 179 RLAKYEIAIARFYMRREAFVAAANRGRYVLEYYPDTDHVQEALEIMVECYDQLKLDELKN 238

Query: 248 EVVSLIQERYPQGYW 262
            V+  ++  YP   +
Sbjct: 239 NVMKTLKLNYPDSSF 253


>gi|167625161|ref|YP_001675455.1| putative lipoprotein [Shewanella halifaxensis HAW-EB4]
 gi|167355183|gb|ABZ77796.1| putative lipoprotein [Shewanella halifaxensis HAW-EB4]
          Length = 268

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 57/270 (21%), Positives = 104/270 (38%), Gaps = 17/270 (6%)

Query: 1   MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
           M   L   +    +  +++ K    +  ++A          SS+      +T       +
Sbjct: 1   MEKFLTITLKESNSSMHKIAKSVAVVLITLAATAC------SSKKGEDPQMTK-SSPEVL 53

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +A   ++  N+SKA          FPF     +  L   +  Y         +  + +
Sbjct: 54  YSQARTSMELGNYSKAVRSLEALDSRFPFGPHKTQVQLDLIYAYYKLDDPASGIANIDRF 113

Query: 121 ITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYT 170
           I   P  K++DYVYY+ G+   Q           I     D +A +   +   R+++ Y 
Sbjct: 114 IRLNPTHKDIDYVYYMRGLVNMQSDRYLFHDMLNIDRSDRDPKAAQDAFKDFDRLIKSYP 173

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
           NS Y   A+  +   +N+LA   +++  YY+K   + AA  R Q VL  Y     AE+A+
Sbjct: 174 NSKYAADAQKRMQHLKNRLALYSIKVAEYYIKMNAWSAAAVRAQSVLETYPGTPSAEKAL 233

Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQG 260
             +  AY  L         + +++  +P  
Sbjct: 234 EIMSTAYGELGQEKLKDHALMVMKANFPNN 263


>gi|239996650|ref|ZP_04717174.1| Competence lipoprotein ComL [Alteromonas macleodii ATCC 27126]
          Length = 254

 Score =  273 bits (698), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 52/255 (20%), Positives = 116/255 (45%), Gaps = 14/255 (5%)

Query: 19  LYKFALTIFFSI-AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           +  F L     + A+  + G     + +    +V      +++Y++A   ++  NFS A 
Sbjct: 1   MKSFRLLAPVLLGAMVSVAGCSSSDNEE---KAVLANMGAQQLYDRAKQSMEVGNFSAAA 57

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           +  +     +PF  ++ +  L   +  Y +GK ++  +  + +I   P   +VDY YY+ 
Sbjct: 58  QTLSALDSRYPFGPLSHQVQLDLIYSYYKSGKNEETLATIDRFIRLNPNHSDVDYAYYMR 117

Query: 138 GMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           G++  +           I     D   ++   +   R++++Y +S Y   A+  +   ++
Sbjct: 118 GLTNMESDSNLFQELMNIDRTDRDPSKSRAAFEDFRRLIQQYPDSKYAADAKQRMVHIKD 177

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
           +LA  E+ I R+Y++R  YVAA  R + V+ ++ +    ++A+  +V +Y  L L +   
Sbjct: 178 RLARYEIAIARFYMRRQAYVAAANRGRYVIEHFPNTTQVQQALEIMVSSYEQLGLDELRN 237

Query: 248 EVVSLIQERYPQGYW 262
             +  ++  YP   +
Sbjct: 238 NAMKTLKLNYPDSEF 252


>gi|221135102|ref|ZP_03561405.1| Competence lipoprotein ComL [Glaciecola sp. HTCC2999]
          Length = 252

 Score =  273 bits (698), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 58/252 (23%), Positives = 109/252 (43%), Gaps = 13/252 (5%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           K  L     I +  L G      + +      +++  + +Y KA   ++  NF  A E  
Sbjct: 2   KIRLYALSLIGLIALGGCSSAPEKAI---EEVELQGPQAIYAKAKTAMENGNFGGAAEIL 58

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
           +     +PF  ++ +  L   +  Y +G   QA +  + +I   P  K++DY Y++ G++
Sbjct: 59  SDLDSRYPFGELSHQVQLDLIYSYYKSGDSAQALATIDRFIRLNPNHKDIDYAYFMRGLT 118

Query: 141 YAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
             +M          I     D  A++       ++++ +  S Y   A+  +   + +LA
Sbjct: 119 NMEMDDNLFQSLFNIDRSDRDPSASREAFNDFRQLLDTFPESKYATDAQKRMVYIKTRLA 178

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
             E+ I R+Y++R  YVAA  R Q VL  Y D    +EA+  +V  Y  L L       +
Sbjct: 179 KYEIAIARFYMRREAYVAAANRGQYVLEYYPDTGMVQEALEIMVSCYDQLGLDQLKANAI 238

Query: 251 SLIQERYPQGYW 262
            +++  YP+  +
Sbjct: 239 KILKLNYPESEF 250


>gi|84501764|ref|ZP_00999936.1| Putative ComL lipoprotein [Oceanicola batsensis HTCC2597]
 gi|84390385|gb|EAQ02944.1| Putative ComL lipoprotein [Oceanicola batsensis HTCC2597]
          Length = 267

 Score =  272 bits (697), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 74/238 (31%), Positives = 125/238 (52%), Gaps = 1/238 (0%)

Query: 34  FLVGWERQSSRDVYLD-SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
            L G    S+  + +     +     ++Y++    L   ++  A EYF +  R +P++  
Sbjct: 2   ALAGCGGTSTDGLGMGGQPIESFTAEQIYQRGEYELDSSDYDSAAEYFGEVERLYPYSEW 61

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           A+++L+M AF  +    Y+++ +  + +I  YP   +  Y  YL+ +SY   I +V  DQ
Sbjct: 62  AKRALIMQAFSFHKDKNYEESRASAQRFIDFYPTDDDAAYAQYLLALSYYDQIDEVGRDQ 121

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
             T   LQ +  ++ERY  S Y + A     +  + LAAKE+EIGRYYLKR  + AAI R
Sbjct: 122 GLTFQALQSLRTVIERYPESDYARSAILKFDLAFDHLAAKEMEIGRYYLKRDHFPAAINR 181

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
           F++V+ ++    H  EA+ RLVEAY++L L DEA+   +++   +    W      L+
Sbjct: 182 FRVVVEDFQTTTHTAEALHRLVEAYLSLGLTDEAQTAGAILGHNFQSTEWYEDSYRLL 239


>gi|56552654|ref|YP_163493.1| outer membrane assembly lipoprotein YfiO [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|4378163|gb|AAD19408.1| unknown [Zymomonas mobilis subsp. mobilis ZM4]
 gi|56544228|gb|AAV90382.1| outer membrane assembly lipoprotein YfiO [Zymomonas mobilis subsp.
           mobilis ZM4]
          Length = 346

 Score =  272 bits (697), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 73/254 (28%), Positives = 127/254 (50%), Gaps = 2/254 (0%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           +  +  +    +IA+  + G   +  +    D+    R    +Y      L    +  A 
Sbjct: 4   KFSRSLVIALTAIAILPMAGCAGRGKKKT--DTRYVARDVDTLYNAGKQSLDSGQYKAAA 61

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
            +F++  R  P++  AR++ LMSAF  Y A  Y  + +  + +++ +  +K+  Y  YLV
Sbjct: 62  AFFDEVERQHPYSIWARRAQLMSAFCNYRARNYSASIASAQRFLSIHTGNKDAPYAMYLV 121

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
            M Y + I+DV +DQ  T+L L  M+ I+ RY ++PY   AR  + +  + L  KE+ IG
Sbjct: 122 MMDYYEQIQDVNHDQHTTQLALDSMNDIIRRYPDTPYAADARLKMDLVHDHLGGKEMAIG 181

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           R+Y +   ++AA  RF+ V+  Y    +  EA+ RL E+Y+AL L  EAR   +++   +
Sbjct: 182 RFYEQSRLWLAATLRFRRVIDEYQTTTYVPEALERLTESYLALGLRAEARNAAAVLGANF 241

Query: 258 PQGYWARYVETLVK 271
           P   W      L+K
Sbjct: 242 PGSKWYSRAYHLIK 255


>gi|313496997|gb|ADR58363.1| DNA uptake lipoprotein-like protein [Pseudomonas putida BIRD-1]
          Length = 339

 Score =  272 bits (697), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 60/241 (24%), Positives = 105/241 (43%), Gaps = 13/241 (5%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
            + +  L      SS    +D   +   + E+Y++A   L   +++ A          +P
Sbjct: 6   LLLIAILGLTAACSSNKEVID---ENLSEAELYQQAQADLDNSSYTSAVNKLKALESRYP 62

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
           F   A ++ L   +  Y   + + A S  E +I  +P+  NVDY YYL G++     R +
Sbjct: 63  FGRYADQAQLELIYANYKNSEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQDRGL 122

Query: 149 ----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
                       D  A +      +++  R+ NS Y   A+  +   RN LA+ E+ +  
Sbjct: 123 LARFLPLDMTKRDPGAARDSYNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIHVAD 182

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           YYL R  YVAA  R + V+ N+ +     + +A +VE+Y  L L + A   +  ++  YP
Sbjct: 183 YYLSRQAYVAAANRGRYVVENFQETPSVGDGLAVMVESYQKLHLDELAATSLETLKLNYP 242

Query: 259 Q 259
            
Sbjct: 243 D 243


>gi|114705261|ref|ZP_01438169.1| hypothetical protein FP2506_09991 [Fulvimarina pelagi HTCC2506]
 gi|114540046|gb|EAU43166.1| hypothetical protein FP2506_09991 [Fulvimarina pelagi HTCC2506]
          Length = 265

 Score =  272 bits (697), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 83/253 (32%), Positives = 135/253 (53%), Gaps = 1/253 (0%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDV-YLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           + K +LT+  +       G       DV  L           +Y + +  L+  N  +A 
Sbjct: 9   MRKASLTVLVAATAGLASGCMSDGGSDVDVLALAAQTERPEVLYNQGLANLEGGNLGEAS 68

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
             F    R  P+   ARK+L+M AF  Y +G Y++A +  + Y++ YP +++  Y  Y++
Sbjct: 69  AKFKAIDRQHPYTDWARKALVMGAFTSYRSGAYEEAINSSKRYLSLYPGTEDAAYAQYIM 128

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
           G+SY + I D+  DQ A     Q M  +++ Y +S YV  A+  + + R+QLA KE+++G
Sbjct: 129 GLSYWRQIPDITRDQTAAGRTAQAMRGVIDNYPDSEYVPDAQTKLRIARDQLAGKELQVG 188

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           RYY +R EYVAAI RF+ V+  Y +    EEA+ARL E Y+A+ L+ EA+   S++ + Y
Sbjct: 189 RYYQERNEYVAAINRFKNVVDVYPETRQVEEALARLTETYLAMGLVREAQASASVLGQNY 248

Query: 258 PQGYWARYVETLV 270
           P   W +    L+
Sbjct: 249 PDSQWYQDSYALL 261



 Score = 38.9 bits (90), Expect = 0.77,   Method: Composition-based stats.
 Identities = 21/150 (14%), Positives = 41/150 (27%), Gaps = 32/150 (21%)

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
             V Y  G++  +                     I  ++  + + + A            
Sbjct: 48  PEVLYNQGLANLEG--------GNLGEASAKFKAIDRQHPYTDWARKALVMGAFTS---- 95

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY---------VALA 241
                      + G Y  AI   +  L+ Y   E A  A   +  +Y            A
Sbjct: 96  ----------YRSGAYEEAINSSKRYLSLYPGTEDAAYAQYIMGLSYWRQIPDITRDQTA 145

Query: 242 LMDEAREVVSLIQERYPQGYWARYVETLVK 271
               A+ +  +I   YP   +    +T ++
Sbjct: 146 AGRTAQAMRGVID-NYPDSEYVPDAQTKLR 174


>gi|26987359|ref|NP_742784.1| competence lipoprotein ComL, putative [Pseudomonas putida KT2440]
 gi|24982012|gb|AAN66248.1|AE016253_3 competence lipoprotein ComL, putative [Pseudomonas putida KT2440]
          Length = 339

 Score =  272 bits (697), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 60/241 (24%), Positives = 105/241 (43%), Gaps = 13/241 (5%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
            + +  L      SS    +D   +   + E+Y++A   L   +++ A          +P
Sbjct: 6   LLLIAILGLTAACSSNKEVID---ENLSEAELYQQAQADLDNSSYTSAVNKLKALESRYP 62

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
           F   A ++ L   +  Y   + + A S  E +I  +P+  NVDY YYL G++     R +
Sbjct: 63  FGRYADQAQLELIYANYKNSEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQDRGL 122

Query: 149 ----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
                       D  A +      +++  R+ NS Y   A+  +   RN LA+ E+ +  
Sbjct: 123 LARFLPLDMTKRDPGAARDSYNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIHVAD 182

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           YYL R  YVAA  R + V+ N+ +     + +A +VE+Y  L L + A   +  ++  YP
Sbjct: 183 YYLSRQAYVAAANRGRYVVENFQETPSVGDGLAVMVESYQKLHLDELAATSLETLKLNYP 242

Query: 259 Q 259
            
Sbjct: 243 D 243


>gi|86358441|ref|YP_470333.1| hypothetical protein RHE_CH02838 [Rhizobium etli CFN 42]
 gi|86282543|gb|ABC91606.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 289

 Score =  272 bits (696), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 91/257 (35%), Positives = 150/257 (58%), Gaps = 5/257 (1%)

Query: 19  LYKFALTIFFSI----AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
           + K A  +F S+    A   + G +     D+      +      +Y + +  +K  N +
Sbjct: 9   MMKTARALFASLLVLSAGASISGCQSDPDIDIT-KLGLETDPPDVLYTQGLANMKAGNMA 67

Query: 75  KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
           +A   F+   R+ PF+  ARK+L+MS FV+Y  GK   A + G  Y++QYP+S++  YV 
Sbjct: 68  EAARKFDAIDRENPFSEWARKALVMSTFVKYRQGKLDDALASGNRYMSQYPKSQDAAYVQ 127

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
           YL+G++Y++ I DV  DQRA+   ++ M  +++ Y NS YV  A+  +   R+QLA KE+
Sbjct: 128 YLIGLTYSKQIVDVTQDQRASAKTIEAMQAVIDNYPNSEYVDDAQAKIRFARDQLAGKEM 187

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
           ++GRYY++R EY+AAI RF++V+  Y +    EEA+ARLVEAY A+ ++DEA+   +++ 
Sbjct: 188 QVGRYYMERKEYLAAISRFRIVVEKYPNTNQIEEALARLVEAYYAMGIVDEAQTAAAVLG 247

Query: 255 ERYPQGYWARYVETLVK 271
             YP   W      L++
Sbjct: 248 HNYPDSQWYADSYKLLQ 264


>gi|241762104|ref|ZP_04760187.1| outer membrane assembly lipoprotein YfiO [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|241373354|gb|EER62954.1| outer membrane assembly lipoprotein YfiO [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
          Length = 346

 Score =  272 bits (696), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 72/254 (28%), Positives = 127/254 (50%), Gaps = 2/254 (0%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           +  +  +    +IA+  + G   +  +    D+    R    +Y      L    +  A 
Sbjct: 4   KFSRSLVIALTAIAILPMAGCAGRGKKKT--DTRYVARDVDTLYNAGKQSLDSGQYKAAA 61

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
            +F++  R  P++  AR++ LMSAF  Y A  Y  + +  + +++ +  +K+  Y  YLV
Sbjct: 62  AFFDEVERQHPYSIWARRAQLMSAFCNYRARNYSASIASAQRFLSIHTGNKDAPYAMYLV 121

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
            M Y + I+DV +DQ  T+L L  M+ I+ RY ++PY   AR  + +  + L  KE+ IG
Sbjct: 122 MMDYYEQIQDVNHDQHTTQLALDSMNDIIRRYPDTPYAADARLKMDLVHDHLGGKEMAIG 181

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           R+Y +   ++AA  RF+ V+  Y    +  EA+ RL E+Y+A+ L  EAR   +++   +
Sbjct: 182 RFYEQSRLWLAATLRFRRVIDEYQTTTYVPEALERLTESYLAMGLRVEARNAAAVLGANF 241

Query: 258 PQGYWARYVETLVK 271
           P   W      L+K
Sbjct: 242 PGSKWYSRAYHLIK 255


>gi|298293090|ref|YP_003695029.1| outer membrane assembly lipoprotein YfiO [Starkeya novella DSM 506]
 gi|296929601|gb|ADH90410.1| outer membrane assembly lipoprotein YfiO [Starkeya novella DSM 506]
          Length = 305

 Score =  272 bits (696), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 72/251 (28%), Positives = 127/251 (50%), Gaps = 4/251 (1%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           + A  +    ++     W   S+       V       + Y + +  + +  +++A + F
Sbjct: 35  RLAGLVMLGASLGGCASWFDTSTEAKVYPDVP----AEQRYNEGLTLMAKDEYAEAIKRF 90

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
               R  P++  ARK++LM A++ Y+   Y ++ S    Y+  +P S +  Y  YL+  S
Sbjct: 91  EDVDRQHPYSEWARKAVLMIAYINYAQANYDESISAARRYLALHPGSADAAYAQYLIAAS 150

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
           Y   I D+  DQ  T+  ++ +  +V ++ N+ Y   A+  + V R+QLA KE+ IGRYY
Sbjct: 151 YFDQIPDISRDQARTERAMEALDEVVRKFPNTEYAVSAKKKLEVARDQLAGKEMMIGRYY 210

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           L +  Y  AI RF++V+  Y    H EEA+ RL EAY+AL ++ EA+   +++   +P  
Sbjct: 211 LDQRNYAGAINRFKVVVTRYQTTRHVEEALYRLTEAYMALGVVGEAQTSAAVLGYNFPDS 270

Query: 261 YWARYVETLVK 271
            W +    LV+
Sbjct: 271 TWYKDAYKLVQ 281


>gi|148545912|ref|YP_001266014.1| DNA uptake lipoprotein-like protein [Pseudomonas putida F1]
 gi|148509970|gb|ABQ76830.1| DNA uptake lipoprotein-like protein [Pseudomonas putida F1]
          Length = 339

 Score =  272 bits (696), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 60/241 (24%), Positives = 105/241 (43%), Gaps = 13/241 (5%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
            + +  L      SS    +D   +   + E+Y++A   L   +++ A          +P
Sbjct: 6   LLLIAILGLTAACSSNKEVID---ENLSEAELYQQAQADLDNSSYTSAVNKLKALESRYP 62

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
           F   A ++ L   +  Y   + + A S  E +I  +P+  NVDY YYL G++     R +
Sbjct: 63  FGRYADQAQLELIYANYKNAEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQDRGL 122

Query: 149 ----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
                       D  A +      +++  R+ NS Y   A+  +   RN LA+ E+ +  
Sbjct: 123 LARFLPLDMTKRDPGAARDSYNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIHVAD 182

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           YYL R  YVAA  R + V+ N+ +     + +A +VE+Y  L L + A   +  ++  YP
Sbjct: 183 YYLSRQAYVAAANRGRYVVENFQETPSVGDGLAVMVESYQKLHLDELAATSLETLKLNYP 242

Query: 259 Q 259
            
Sbjct: 243 D 243


>gi|116253037|ref|YP_768875.1| competence lipoprotein ComL protein [Rhizobium leguminosarum bv.
           viciae 3841]
 gi|115257685|emb|CAK08783.1| putative competence lipoprotein ComL protein [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 289

 Score =  272 bits (696), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 91/257 (35%), Positives = 150/257 (58%), Gaps = 5/257 (1%)

Query: 19  LYKFALTIFFSI----AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
           + K A  +F S+    A   + G +     D+      +      +Y + +  +K  N +
Sbjct: 9   MMKTARALFASLLVLSAGALISGCQSDPDIDIT-KLGLETDPPDVLYTQGLANMKAGNMA 67

Query: 75  KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
           +A   F+   R+ PF+  ARK+L+MS FV+Y  G+   A + G  Y++QYP+S++  YV 
Sbjct: 68  EAARKFDAIDRENPFSEWARKALVMSTFVKYRQGRLDDALASGNRYMSQYPKSQDAAYVQ 127

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
           YL+G++Y++ I DV  DQRA+   ++ M  +++ Y NS YV  A+  +   R+QLA KE+
Sbjct: 128 YLIGLTYSKQIVDVTQDQRASAKTIEAMQAVIDNYPNSEYVDDAQAKIRFSRDQLAGKEM 187

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
           +IGRYY++R EY+AAI RF++V+  Y +    EEA+ARLVEAY A+ ++DEA+   +++ 
Sbjct: 188 QIGRYYMERKEYLAAISRFRIVVEKYPNTNQIEEALARLVEAYYAMGIVDEAQTAAAVLG 247

Query: 255 ERYPQGYWARYVETLVK 271
             YP   W      L++
Sbjct: 248 HNYPDSQWYADSYKLLQ 264


>gi|159185041|ref|NP_355049.2| hypothetical protein Atu2084 [Agrobacterium tumefaciens str. C58]
 gi|159140315|gb|AAK87834.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 288

 Score =  272 bits (696), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 79/253 (31%), Positives = 139/253 (54%), Gaps = 1/253 (0%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +   A+++    A   +   +     D+    V +      +Y++ +  +   N ++A  
Sbjct: 13  MRGIAVSLMLVGASVVVTACQSDPDIDITKLGV-ETDPPDVLYKQGLANMNAGNMTEASR 71

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            F    + +PF    +K+L+M  F+     K   A + G  ++ QYP SK+  YV Y++G
Sbjct: 72  KFEAIDKQYPFTEWGQKALVMQTFIATRTNKNDVAITSGSRFLRQYPRSKDAAYVQYMIG 131

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           ++Y++ I DV  DQRA +  ++ M+++V  Y +S YV  A+  +   R+QLA +E+++GR
Sbjct: 132 LAYSKQISDVTQDQRAAQRTIEAMNKVVNDYPSSEYVADAQAKIRFARDQLAGREMQVGR 191

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           YYL+R EY+AA+ RF++V+  Y +    EEA+ARL EAY A+ L+DEA+   +++   YP
Sbjct: 192 YYLERKEYLAAVSRFRIVVEQYQNTNQIEEALARLTEAYYAMGLVDEAQTAAAVLGNNYP 251

Query: 259 QGYWARYVETLVK 271
              W      L+K
Sbjct: 252 DSQWYADSYKLLK 264


>gi|75675253|ref|YP_317674.1| putative lipoprotein [Nitrobacter winogradskyi Nb-255]
 gi|74420123|gb|ABA04322.1| putative lipoprotein [Nitrobacter winogradskyi Nb-255]
          Length = 298

 Score =  272 bits (696), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 75/237 (31%), Positives = 126/237 (53%), Gaps = 6/237 (2%)

Query: 35  LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY-EYFNQCSRDFPFAGVA 93
           L+        + + D   D     ++Y + +  + +Q   KA  + F++  R+ P++  A
Sbjct: 42  LLDKFTAKDEETFSDEPAD-----KLYNEGLFLMNKQRDLKAVTKKFDEVDREHPYSEWA 96

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
           RKSLLMSA+  Y AG Y         Y+T +P S +  Y  YL+ +S    I DV  DQ 
Sbjct: 97  RKSLLMSAYASYQAGDYDTCIGSASRYVTLHPGSPDAAYAQYLIAVSNYDQIADVSRDQA 156

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
            T+  ++ +  ++ +Y  S Y   A+  +   R+QLA KE+ +GRYY++R +Y  AI RF
Sbjct: 157 RTEKAMRTLEEVIRKYPTSEYAGEAKKKLQGARDQLAGKEMAVGRYYMERRDYTGAINRF 216

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
           + V+  +    H EEA+ARL EAY+A+ ++ EA+   +++   +P  +W +    LV
Sbjct: 217 KTVVTRFQTTRHVEEALARLTEAYMAIGIVAEAQTAAAVLGHNFPDSHWYKDAYNLV 273


>gi|226943323|ref|YP_002798396.1| competence protein ComL [Azotobacter vinelandii DJ]
 gi|226718250|gb|ACO77421.1| competence protein ComL [Azotobacter vinelandii DJ]
          Length = 337

 Score =  272 bits (696), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 59/244 (24%), Positives = 107/244 (43%), Gaps = 13/244 (5%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           +    ++  +     +  ++  +D   +   + E+Y++A   L  +NF  A         
Sbjct: 6   LLLIASLVLIAACGSKKEKEEVVD---ENLSETELYQQAQNDLNNENFGSATTKLKALES 62

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
            +PF   A ++ L   +  Y + +   + S  E +I  +P+  NVDY YYL G++     
Sbjct: 63  RYPFGRYAEQAQLELIYAYYKSQETDASRSAAERFIRLHPQHPNVDYAYYLKGLASFDQD 122

Query: 146 RDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           R +            D  A +      +++  R+ NS Y   A+  +   RN LAA E+ 
Sbjct: 123 RGLLSRFLPLDMTKRDPGAARDSFNEFAQLTSRFPNSRYAPDAKARMVYLRNLLAAYEIH 182

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           +  YYLKR  YVAA  R + V+ N  +     + +A ++EAY  + L + A   +  ++ 
Sbjct: 183 VAHYYLKREAYVAAANRGRYVVENLQETPAVGDGLAVMIEAYQRMTLDELATTSLETLKL 242

Query: 256 RYPQ 259
            YP 
Sbjct: 243 NYPD 246


>gi|227822643|ref|YP_002826615.1| competence lipoprotein ComL [Sinorhizobium fredii NGR234]
 gi|227341644|gb|ACP25862.1| competence lipoprotein ComL [Sinorhizobium fredii NGR234]
          Length = 288

 Score =  271 bits (695), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 77/240 (32%), Positives = 130/240 (54%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
              L+   +            +      +Y + +  L     ++A   F+   R  PF+ 
Sbjct: 25  GSSLITACQNDPDIDITKLTAETDPPEVLYNQGLANLNAGKTTEAGRKFDAIDRQHPFSE 84

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
            ARK+L+M+AFV Y  G+YQ A +    Y+  YP+S++  Y  Y+ G++Y + I  V  D
Sbjct: 85  YARKALVMNAFVAYRNGQYQDAINSTNRYLNLYPQSEDAAYAQYIQGLAYTKQIPSVTQD 144

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           Q+  +  ++ M  +V++Y +S YV  A+  +   R+QLA KE+++GRYYL+R EY+AAI 
Sbjct: 145 QKPAQRAIEAMQVVVDKYPDSEYVDDAQSKIRFARDQLAGKEMQVGRYYLERKEYLAAIS 204

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           RF++V+  Y +    EEA+ARLVEAY ++ +  EA+   +++   YP   W      L++
Sbjct: 205 RFRVVVEQYPNTNQVEEALARLVEAYFSMGVTAEAQTAAAVLGHNYPDSQWYADSYKLLQ 264


>gi|260753695|ref|YP_003226588.1| outer membrane assembly lipoprotein YfiO [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|258553058|gb|ACV76004.1| outer membrane assembly lipoprotein YfiO [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 346

 Score =  271 bits (695), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 72/254 (28%), Positives = 127/254 (50%), Gaps = 2/254 (0%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           +  +  +    +IA+  + G   +  +    D+    R    +Y      L    +  A 
Sbjct: 4   KFSRSLVIALTAIAILPMAGCAGRGKKKT--DTRYVARDVDTLYNAGKQSLDSGQYKAAA 61

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
            +F++  R  P++  AR++ LMSAF  Y A  Y  + +  + +++ +  +K+  Y  YLV
Sbjct: 62  AFFDEVERQHPYSIWARRAQLMSAFCNYRARNYSASIASAQRFLSIHTGNKDAPYAMYLV 121

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
            M Y + I+DV +DQ  T+L L  M+ I+ RY ++PY   AR  + +  + L  KE+ IG
Sbjct: 122 MMDYYEQIQDVNHDQHTTQLALDSMNDIIRRYPDTPYAADARLKMDLVHDHLGGKEMAIG 181

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           R+Y +   ++AA  RF+ V+  Y    +  EA+ RL E+Y+A+ L  EAR   +++   +
Sbjct: 182 RFYEQSRLWLAATLRFRRVIDEYQTTTYVPEALERLTESYLAMGLRVEARNAAAVLGANF 241

Query: 258 PQGYWARYVETLVK 271
           P   W      L+K
Sbjct: 242 PGSKWYSRAYHLIK 255


>gi|325273288|ref|ZP_08139565.1| competence lipoprotein ComL [Pseudomonas sp. TJI-51]
 gi|324101573|gb|EGB99142.1| competence lipoprotein ComL [Pseudomonas sp. TJI-51]
          Length = 339

 Score =  271 bits (695), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 59/241 (24%), Positives = 105/241 (43%), Gaps = 13/241 (5%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
            + +  L      SS    +D   +   + E+Y++A   L   +++ A          +P
Sbjct: 6   LLLIAILGLTAACSSNKEVID---ENLSEAELYQQAQADLDNSSYTSAVNKLKALESRYP 62

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
           F   A ++ L   +  Y   + + A S  E +I  +P+  NVDY YYL G++     R +
Sbjct: 63  FGRYADQAQLELIYANYKNAEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQDRGL 122

Query: 149 ----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
                       D  A +      +++  R+ NS Y   A+  +   RN LA+ E+ +  
Sbjct: 123 LARFLPLDMTKRDPGAARDSYNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIHVAD 182

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           YYL R  YVAA  R + V+ N+ +     + +A +VE+Y  + L + A   +  ++  YP
Sbjct: 183 YYLSRQAYVAAANRGRYVVENFQETPSVGDGLAVMVESYQKMHLDELAATSLETLKLNYP 242

Query: 259 Q 259
            
Sbjct: 243 D 243


>gi|327482284|gb|AEA85594.1| competence protein ComL [Pseudomonas stutzeri DSM 4166]
          Length = 329

 Score =  271 bits (695), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 64/244 (26%), Positives = 101/244 (41%), Gaps = 17/244 (6%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           +                + D  L  V       E+Y++A   L  ++++ A         
Sbjct: 6   LLLIAIFALTAACSSNETVDENLGEV-------ELYQQAQADLDNKSYTSAISKLKALES 58

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
            +PF   A ++ L   +  Y   + + A S  E +I  +P+  NVDY YYL G++     
Sbjct: 59  RYPFGRFAEQAQLELIYAYYRNAEPEAARSAAERFIRLHPQHPNVDYAYYLKGLASFDQD 118

Query: 146 RDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           R +            D  A +      +++  RY NS Y   A+  +   RN LAA E+ 
Sbjct: 119 RGLLARFLPLDMTKRDPGAARDSFNEFAQLTSRYPNSRYSPDAKARMIYLRNLLAANEIH 178

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           +  YYLKR  YVAA  R + V+ N+       + +A + EAY  L L D A   +  +Q 
Sbjct: 179 VAHYYLKRQAYVAAANRGRYVVENFQGTPAVADGLAVMTEAYQRLGLDDLADASLKTLQL 238

Query: 256 RYPQ 259
            YP 
Sbjct: 239 NYPD 242


>gi|163738728|ref|ZP_02146142.1| competence lipoprotein ComL, putative [Phaeobacter gallaeciensis
           BS107]
 gi|161388056|gb|EDQ12411.1| competence lipoprotein ComL, putative [Phaeobacter gallaeciensis
           BS107]
          Length = 282

 Score =  271 bits (695), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 72/252 (28%), Positives = 126/252 (50%), Gaps = 1/252 (0%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +   A TI   + V  L G               +     ++YE+    ++      A  
Sbjct: 4   MGAAAKTIGAVLLVAALSGCGGDGGA-AKSSQPLEGFTPEQIYERGEFEMERNRTEDAAF 62

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
           YF++  R +P++  A+++L+M A+  +    Y+ + +  + YI  YP  ++  Y  YL+ 
Sbjct: 63  YFSEIERLYPYSSWAKQALIMQAYAYHLGRDYEDSRAAAQRYIDFYPTEEDAAYAQYLLA 122

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           +SY   I +V  DQ  T   LQ +  ++E Y +S Y   A     +  + LA KE+EIGR
Sbjct: 123 LSYYDQIDEVGRDQGLTFQALQSLRTVIEVYPDSEYASSAILKFDLAFDHLAGKEMEIGR 182

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           YYL++G Y +A+ RF++V+ ++    H  EA+ RLVEAY++L L++EA+   +++   Y 
Sbjct: 183 YYLRKGHYTSAVNRFRVVVEDFQTTTHTAEALHRLVEAYLSLGLVNEAQTAGAILGHNYQ 242

Query: 259 QGYWARYVETLV 270
              W      L+
Sbjct: 243 STEWYEDSFKLL 254


>gi|254464035|ref|ZP_05077446.1| DNA uptake lipoprotein [Rhodobacterales bacterium Y4I]
 gi|206684943|gb|EDZ45425.1| DNA uptake lipoprotein [Rhodobacterales bacterium Y4I]
          Length = 282

 Score =  271 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 75/248 (30%), Positives = 125/248 (50%), Gaps = 1/248 (0%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           A T+   + +  L G           DSV +     ++YE+    L  +    A  YF +
Sbjct: 8   ARTLGAVVLMAALAGCGGDGGAVKRGDSV-EAYSPDQIYERGEFELANRRPKDAVYYFAE 66

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
             R +P++  A+++++M AF  +S   Y+ + +  + +I  YP  ++  Y  YL+ +SY 
Sbjct: 67  IERLYPYSEWAKQAVIMQAFAYHSTRDYENSRAAAQRFIDFYPADEDAAYAQYLLALSYY 126

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
             I +V  DQ  T   LQ +  ++E Y +S Y   A     +  + LA KE+EIGRYYL+
Sbjct: 127 DQIDEVGRDQGLTFQALQALRTVIEVYPDSQYATSAILKFDLAFDHLAGKEMEIGRYYLR 186

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           RG Y +AI RF++V+  +    H  EA+ RLVEAY++L L  EA+   +++   +    W
Sbjct: 187 RGHYTSAINRFRVVVEEFQTTSHTPEALHRLVEAYLSLGLTAEAQTAAAILGHNFQSTEW 246

Query: 263 ARYVETLV 270
                 L+
Sbjct: 247 YEDSYRLL 254


>gi|104783635|ref|YP_610133.1| competence lipoprotein ComL [Pseudomonas entomophila L48]
 gi|95112622|emb|CAK17350.1| putative competence lipoprotein ComL [Pseudomonas entomophila L48]
          Length = 339

 Score =  271 bits (694), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 59/241 (24%), Positives = 105/241 (43%), Gaps = 13/241 (5%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
            + +  L      SS    +D   +   + E+Y++A   L   +++ A          +P
Sbjct: 6   LLLIAILGLTAACSSNKEVID---ENLSEAELYQQAQADLDNSSYTSAVNKLKALESRYP 62

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
           F   A ++ L   +  Y   + + A S  E +I  +P+  NVDY YYL G++     R +
Sbjct: 63  FGRYADQAQLELIYANYKNSEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQDRGL 122

Query: 149 ----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
                       D  A +      +++  R+ NS Y   A+  +   RN LA+ E+ +  
Sbjct: 123 LARFLPLDMTKRDPGAARDSYNEFAQLTSRFPNSRYSPDAKQRMIYLRNLLASYEIHVAN 182

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           YYL R  YVAA  R + V+ N+ +     + +A +VE+Y  + L + A   +  ++  YP
Sbjct: 183 YYLSREAYVAAANRGRYVVENFQETPSVGDGLAVMVESYQHMHLDELAATSLETLKLNYP 242

Query: 259 Q 259
            
Sbjct: 243 D 243


>gi|190892573|ref|YP_001979115.1| competence lipoprotein protein [Rhizobium etli CIAT 652]
 gi|190697852|gb|ACE91937.1| competence lipoprotein protein [Rhizobium etli CIAT 652]
 gi|327194613|gb|EGE61463.1| competence lipoprotein protein [Rhizobium etli CNPAF512]
          Length = 289

 Score =  271 bits (694), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 94/257 (36%), Positives = 148/257 (57%), Gaps = 5/257 (1%)

Query: 19  LYKFALTIFFSI----AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
           + K A  +F S+    A   + G +     D+      +      +Y + +  +K  N +
Sbjct: 9   MMKTARALFASLLVLSAGASISGCQSDPDIDIT-KLGLETDPPDVLYTQGLANMKAGNMA 67

Query: 75  KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
           +A   F+   R+ PF+  ARK+L+MS FV+Y  GK   A + G  Y+ QYP+S++  YV 
Sbjct: 68  EAARKFDAIDRENPFSEWARKALVMSTFVKYRQGKLDDALASGNRYMAQYPKSQDAAYVQ 127

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
           YLVG++Y++ I DV  DQRA    ++ M  +V+ Y NS YV  A+  +   R+QLA KE+
Sbjct: 128 YLVGLTYSKQIVDVTQDQRAAAKTIEAMQAVVDNYPNSEYVDDAQAKIRFARDQLAGKEM 187

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
           +IGRYY++R EY+AAI RF++V+  Y +    EEA+ARLVEAY A+ ++DEA+   +++ 
Sbjct: 188 QIGRYYMERKEYLAAISRFRIVVEKYPNTNQIEEALARLVEAYYAMGIVDEAQTAAAVLG 247

Query: 255 ERYPQGYWARYVETLVK 271
             YP   W      L++
Sbjct: 248 HNYPDSQWYADSYKLLQ 264


>gi|158426191|ref|YP_001527483.1| putative lipoprotein precursor [Azorhizobium caulinodans ORS 571]
 gi|158333080|dbj|BAF90565.1| putative lipoprotein precursor [Azorhizobium caulinodans ORS 571]
          Length = 284

 Score =  271 bits (694), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 82/251 (32%), Positives = 130/251 (51%), Gaps = 6/251 (2%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           + A  +   +    L G           D +       ++Y + +  L + +   A + F
Sbjct: 16  RAAALLGVVLVSATLAGCANDK------DVMAPDEPAEKIYNEGLTLLNKGDLDGAAKRF 69

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
               +  P++  ARK+LLM  +V Y AGKY  A S G+ Y+  +P S++  YV YLV  S
Sbjct: 70  EDIDKTHPYSEWARKALLMDTYVYYEAGKYDDAISAGKRYLALHPGSQDAPYVSYLVASS 129

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
               I D+  DQR T+  L  +  ++ +Y N+ Y  GA+  V V R+QLA KE+ IGRYY
Sbjct: 130 LYDSIPDISRDQRRTRQALDALDDVIRKYPNTEYAAGAKRKVEVARDQLAGKEMLIGRYY 189

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           L++  Y  AI RF++V+  Y      EEA+ R+ EAY+AL +++EA+   +++   YP  
Sbjct: 190 LEQRNYTGAINRFKVVITQYQTTRQTEEALFRITEAYMALGIVNEAQTAAAVLGYNYPDS 249

Query: 261 YWARYVETLVK 271
            W +    LV+
Sbjct: 250 QWYKDAFKLVQ 260


>gi|121634500|ref|YP_974745.1| competence lipoprotein [Neisseria meningitidis FAM18]
 gi|218767825|ref|YP_002342337.1| competence lipoprotein [Neisseria meningitidis Z2491]
 gi|254804586|ref|YP_003082807.1| DNA uptake lipoprotein [Neisseria meningitidis alpha14]
 gi|18203141|sp|Q9JVB7|COML_NEIMA RecName: Full=Competence lipoprotein ComL; Flags: Precursor
 gi|120866206|emb|CAM09946.1| competence lipoprotein [Neisseria meningitidis FAM18]
 gi|121051833|emb|CAM08139.1| competence lipoprotein [Neisseria meningitidis Z2491]
 gi|254668129|emb|CBA04725.1| DNA uptake lipoprotein [Neisseria meningitidis alpha14]
 gi|254670507|emb|CBA06261.1| competence lipoprotein ComL [Neisseria meningitidis alpha153]
 gi|261392925|emb|CAX50510.1| competence lipoprotein ComL [Neisseria meningitidis 8013]
 gi|308388891|gb|ADO31211.1| competence lipoprotein [Neisseria meningitidis alpha710]
 gi|319410075|emb|CBY90409.1| competence lipoprotein ComL [Neisseria meningitidis WUE 2594]
 gi|325131844|gb|EGC54544.1| competence lipoprotein comL [Neisseria meningitidis M6190]
 gi|325136075|gb|EGC58685.1| competence lipoprotein comL [Neisseria meningitidis M0579]
 gi|325137894|gb|EGC60469.1| competence lipoprotein comL [Neisseria meningitidis ES14902]
 gi|325139919|gb|EGC62449.1| competence lipoprotein comL [Neisseria meningitidis CU385]
 gi|325141925|gb|EGC64365.1| competence lipoprotein comL [Neisseria meningitidis 961-5945]
 gi|325197922|gb|ADY93378.1| competence lipoprotein comL [Neisseria meningitidis G2136]
 gi|325202502|gb|ADY97956.1| competence lipoprotein comL [Neisseria meningitidis M01-240149]
 gi|325207747|gb|ADZ03199.1| competence lipoprotein comL [Neisseria meningitidis NZ-05/33]
          Length = 267

 Score =  271 bits (694), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 62/259 (23%), Positives = 115/259 (44%), Gaps = 14/259 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K  LT+   +A   L     Q + D     +T      ++Y +A   L   N+++A +
Sbjct: 1   MKKILLTVSLGLA---LSACATQGTVDKDA-QITQDWSVEKLYAEAQDELNSSNYTRAVK 56

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            +      FP +  AR+S L +A+  Y   +  +A +  E +   +P+  N+DY  YL G
Sbjct: 57  LYEILESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIERFRRLHPQHPNMDYALYLRG 116

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +      +              D +A +   Q  + +V+R+ NS Y   A   +    + 
Sbjct: 117 LVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNSKYAADATARMVKLVDA 176

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           L   E+ + RYY+KRG Y+AA  R Q ++ +Y +  + EE++A L  AY  L     A +
Sbjct: 177 LGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESLAILELAYQKLGKPQLAAD 236

Query: 249 VVSLIQERYPQGYWARYVE 267
              +++  +P+  +  +  
Sbjct: 237 TRRVLETNFPKSPFLTHAW 255


>gi|170723709|ref|YP_001751397.1| competence lipoprotein ComL [Pseudomonas putida W619]
 gi|169761712|gb|ACA75028.1| competence lipoprotein ComL [Pseudomonas putida W619]
          Length = 339

 Score =  271 bits (694), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 61/241 (25%), Positives = 105/241 (43%), Gaps = 13/241 (5%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
            + +  L      SS    +D   +   + E+Y++A   L   +++ A          +P
Sbjct: 6   LLLIAILGLTAACSSNKEVID---ENLSEAELYQQAQADLDNSSYNSAVNKLKALESRYP 62

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
           F   A ++ L   +  Y   + + A S  E +I  +P+  NVDY YYL G++     R +
Sbjct: 63  FGRYADQAQLELIYANYKNSEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQDRGL 122

Query: 149 ----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
                       D  A +      +++  R+ NS Y   A+  +   RN LA+ E+ +  
Sbjct: 123 VARFLPLDMTKRDPGAARDSYNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIHVAD 182

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           YYL R  YVAA  R + V+ N+ +     + +A +VEAY  + L D A   +  ++  YP
Sbjct: 183 YYLSRQAYVAAANRGRYVVENFQETPSVGDGLAVMVEAYQKMHLDDLAATSLETLKLNYP 242

Query: 259 Q 259
            
Sbjct: 243 D 243


>gi|283786207|ref|YP_003366072.1| lipoprotein [Citrobacter rodentium ICC168]
 gi|282949661|emb|CBG89280.1| putative lipoprotein [Citrobacter rodentium ICC168]
          Length = 245

 Score =  271 bits (694), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 100/248 (40%), Gaps = 17/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +    FL G     S++   D+        E+Y  A   L++ N+ +A  
Sbjct: 1   MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWKQAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y       A +  + +I   P   N+DYV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   +                D +  +      S++V  Y NS Y   A   +   +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVRGYPNSQYTTDATKRLVFLKDR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E  +  YY KRG +VA + R + +L ++ D +   +A+  +  AY  + +  +A +
Sbjct: 174 LAKYEYSVAEYYTKRGAWVAVVNRVEGMLRDFPDTQATRDALPLMENAYREMQMTTQAEK 233

Query: 249 VVSLIQER 256
           V  +I   
Sbjct: 234 VAKIIAAN 241


>gi|332992386|gb|AEF02441.1| Competence lipoprotein ComL [Alteromonas sp. SN2]
          Length = 255

 Score =  271 bits (694), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 55/250 (22%), Positives = 113/250 (45%), Gaps = 12/250 (4%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
            L      A+  + G    SS D    +V      +++Y +A   ++  NFS A +    
Sbjct: 6   LLAPVLLGAMVSVAGCS--SSSDEEEKAVMANMGAQQLYNRAKQSMEVGNFSAAAQTLGA 63

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
               +PF  ++ +  L   +  Y +GK  +  +  + +I   P   +VDY YY+ G++  
Sbjct: 64  LDSRYPFGPLSHQVQLDLIYSYYKSGKSDETLATIDRFIRLNPNHSDVDYAYYMRGLTNM 123

Query: 143 QM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
           +           I     D   ++   +   R++++Y +S Y   AR  +   +++LA  
Sbjct: 124 ESDSNLFQDLMNIDRTDRDPSKSRQAFEDFRRLMQQYPDSKYAADARKRMLHIKDRLARY 183

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           E+ I R+Y++R  YVAA  R + V+ ++ ++   ++A+  +V +Y  L L D     +  
Sbjct: 184 EIAIARFYMRRHAYVAAANRGRYVIEHFPESTQIQQALEIMVSSYEQLGLDDLRGNAMKT 243

Query: 253 IQERYPQGYW 262
           ++  +P+  +
Sbjct: 244 LKLNFPESDF 253


>gi|49474448|ref|YP_032490.1| competence lipoprotein comL precursor [Bartonella quintana str.
           Toulouse]
 gi|49239952|emb|CAF26357.1| Competence lipoprotein comL precursor [Bartonella quintana str.
           Toulouse]
          Length = 297

 Score =  271 bits (694), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 87/250 (34%), Positives = 132/250 (52%), Gaps = 1/250 (0%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDS-VTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
            L +    + C L G   +    +   + V  +     +Y +A+  L      +A + F 
Sbjct: 22  LLGVVLLGSTCVLGGCLFKEKNTLDPSAYVLKIDPPDVLYNQALANLDSGRLGEASKKFL 81

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
              + + +    RKSL+M AF  Y   KY +A S+ + YIT YP S +  Y YY++G+S 
Sbjct: 82  TIEKQYAYTEWGRKSLVMGAFTNYQLAKYDEAISMAQRYITLYPGSDDSAYAYYIIGLSS 141

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
              I DV  DQR TK  +  M  +VERY +S YVK A+  + +GR QLA KE+++GRYY 
Sbjct: 142 FCRIPDVTRDQRDTKRAIAAMQLLVERYPDSEYVKDAKAKIRIGREQLAGKEMQVGRYYE 201

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +   Y+AA  RF+ V+  YSD    EEA+ RL E  +AL L  EA+   +++   YP+  
Sbjct: 202 EGRRYLAASRRFRKVVEEYSDTNQIEEALFRLTEVNLALGLTAEAQTAAAILGRNYPKSE 261

Query: 262 WARYVETLVK 271
           W ++   L+K
Sbjct: 262 WYKFSYNLLK 271


>gi|254470086|ref|ZP_05083490.1| outer membrane assembly lipoprotein YfiO [Pseudovibrio sp. JE062]
 gi|211960397|gb|EEA95593.1| outer membrane assembly lipoprotein YfiO [Pseudovibrio sp. JE062]
          Length = 288

 Score =  271 bits (693), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 84/249 (33%), Positives = 136/249 (54%), Gaps = 8/249 (3%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           +L +   +A C         ++D   D   D      ++ +A+      + S A + F +
Sbjct: 24  SLALALVVAGCA--------TKDDVDDLALDETPAEVMFNEALALRASGDISGAAKKFYE 75

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
             R +P++  ARKSL+  A++ +  GKY +A +  E + T YP +K+  Y  +++G SY 
Sbjct: 76  LDRVYPYSEFARKSLINIAYLNFKMGKYPEAVAAAERFTTLYPGNKDSAYALFIIGESYF 135

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
           + I DV  DQ  T   L  M  +V+RY +S Y K AR  +    +QLA KE+E+GRYYL 
Sbjct: 136 RQIPDVGRDQAVTAKALDAMREVVQRYPDSEYTKQARQRIRATEDQLAGKEMEVGRYYLA 195

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           R  Y+A+I RF++V+ NY    H EEA+ RL E+Y AL + +EA+   +++   +PQ  W
Sbjct: 196 RRNYLASINRFKVVVTNYQTTRHVEEALYRLTESYYALGVTNEAQTAAAVLGHNFPQSQW 255

Query: 263 ARYVETLVK 271
            +   +L+K
Sbjct: 256 YQDAYSLLK 264


>gi|218659461|ref|ZP_03515391.1| hypothetical protein RetlI_07243 [Rhizobium etli IE4771]
          Length = 294

 Score =  271 bits (693), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 94/257 (36%), Positives = 150/257 (58%), Gaps = 5/257 (1%)

Query: 19  LYKFALTIFFSI----AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
           + K A  +F S+    A   + G +     D+      +      +Y + +  +K  N +
Sbjct: 14  MMKTARALFASLLVLSAGASISGCQSDPDIDIT-KLGLETDPPDVLYTQGLANMKAGNMA 72

Query: 75  KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
           +A   F+   R+ PF+  ARK+L+MS FV+Y  GK+  A + G  Y+ QYP+S++  YV 
Sbjct: 73  EAARKFDAIDRENPFSEWARKALVMSTFVKYRQGKFDDALASGNRYMAQYPKSQDAAYVQ 132

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
           YLVG++Y++ I DV  DQRA+   ++ M  +V+ Y NS YV  A+  +   R+QLA KE+
Sbjct: 133 YLVGLTYSKQIVDVTQDQRASAKTIEAMQAVVDNYPNSEYVDDAQAKIRYARDQLAGKEM 192

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
           +IGRYY++R EY+AAI RF++V+  Y +    EEA+ARLVEAY A+ ++DEA+   +++ 
Sbjct: 193 QIGRYYMERKEYLAAISRFRIVVEKYPNTNQIEEALARLVEAYYAMGIVDEAQTAAAVLG 252

Query: 255 ERYPQGYWARYVETLVK 271
             YP   W      L++
Sbjct: 253 HNYPDSQWYADSYKLLQ 269


>gi|241205546|ref|YP_002976642.1| outer membrane assembly lipoprotein YfiO [Rhizobium leguminosarum
           bv. trifolii WSM1325]
 gi|240859436|gb|ACS57103.1| outer membrane assembly lipoprotein YfiO [Rhizobium leguminosarum
           bv. trifolii WSM1325]
          Length = 281

 Score =  271 bits (693), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 92/257 (35%), Positives = 150/257 (58%), Gaps = 5/257 (1%)

Query: 19  LYKFALTIFFSI----AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
           + K A  +F S+    A   + G +     D+      +      +Y + +  +K  N +
Sbjct: 1   MMKTARALFASLLVLSAGASISGCQSDPDIDIT-KLGLETDPPDVLYTQGLANMKAGNMA 59

Query: 75  KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
           +A   F+   R+ PF+  ARK+L+MS FV+Y  G+   A + G  Y++QYP+S++  YV 
Sbjct: 60  EAARKFDAIDRENPFSEWARKALVMSTFVKYRQGRLDDALASGNRYMSQYPKSQDAAYVQ 119

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
           YL+G++Y++ I DV  DQRA+   ++ M  +++ Y NS YV  A+  +   R+QLA KE+
Sbjct: 120 YLIGLTYSKQIVDVTQDQRASAKTIEAMQAVIDNYPNSEYVDDAQAKIRFSRDQLAGKEM 179

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
           +IGRYYL+R EY+AAI RF++V+  Y +    EEA+ARLVEAY A+ ++DEA+   +++ 
Sbjct: 180 QIGRYYLERKEYLAAISRFRIVVEKYPNTNQIEEALARLVEAYYAMGIVDEAQTAAAVLG 239

Query: 255 ERYPQGYWARYVETLVK 271
             YP   W      L++
Sbjct: 240 HNYPDSQWYADSYKLLQ 256


>gi|304387999|ref|ZP_07370171.1| competence lipoprotein ComL [Neisseria meningitidis ATCC 13091]
 gi|304337998|gb|EFM04136.1| competence lipoprotein ComL [Neisseria meningitidis ATCC 13091]
          Length = 267

 Score =  271 bits (693), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 62/259 (23%), Positives = 115/259 (44%), Gaps = 14/259 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K  LT+   +A   L     Q + D     +T      ++Y +A   L   N+++A +
Sbjct: 1   MKKILLTVSLGLA---LSACATQGTVDKDA-QITQDWSVEKLYAEAQDELNSSNYTRAVK 56

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            +      FP +  AR+S L +A+  Y   +  +A +  E +   +P+  N+DY  YL G
Sbjct: 57  LYEILESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIERFRRLHPQHPNMDYALYLRG 116

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +      +              D +A +   Q  + +V+R+ NS Y   A   +    + 
Sbjct: 117 LVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNSKYAADATARMIKLVDA 176

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           L   E+ + RYY+KRG Y+AA  R Q ++ +Y +  + EE++A L  AY  L     A +
Sbjct: 177 LGGNEMSVARYYMKRGAYIAATNRAQKIIGSYQNTRYVEESLAILELAYQKLGKPQLAAD 236

Query: 249 VVSLIQERYPQGYWARYVE 267
              +++  +P+  +  +  
Sbjct: 237 TRRVLETNFPKSPFLTHAW 255


>gi|24375081|ref|NP_719124.1| hypothetical protein SO_3580 [Shewanella oneidensis MR-1]
 gi|24349840|gb|AAN56568.1|AE015795_2 conserved hypothetical protein [Shewanella oneidensis MR-1]
          Length = 268

 Score =  271 bits (693), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 60/271 (22%), Positives = 101/271 (37%), Gaps = 17/271 (6%)

Query: 1   MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
           M   L        +  Y+  K    + FS+A           S     + +       E+
Sbjct: 1   MEKFLTTTYKELNSSMYKFSKGLTLVLFSLA-------LSACSSSPEDNDIAAKTSPDEL 53

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +A   ++  N+SKA          FPF     +  L   +  Y         +  + +
Sbjct: 54  YSQARTSMELGNYSKAVRSLEALDSRFPFGPHKTQVQLDLIYAYYKMDDVASGIANIDRF 113

Query: 121 ITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYT 170
           I   P   N+DYVYY+ G+   Q           I     D +  +   +   R+++ Y 
Sbjct: 114 IRLNPTHPNIDYVYYMRGLVNMQADSYLFHDMLNIDRTDRDPKNAQDAFKDFDRLIKTYP 173

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
           NS Y   A+  +   +N+LA   +++  YY+K   + AA  R Q VL  Y      E A+
Sbjct: 174 NSKYAADAQKRMLSLKNRLAKYSIQVAEYYIKMNAWSAAAVRAQSVLETYPGTPSTERAL 233

Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             + EAY  L      + V+ ++Q  +P   
Sbjct: 234 EIMAEAYGELGQNQLKQNVLMVMQANFPNNE 264


>gi|300021786|ref|YP_003754397.1| outer membrane assembly lipoprotein YfiO [Hyphomicrobium
           denitrificans ATCC 51888]
 gi|299523607|gb|ADJ22076.1| outer membrane assembly lipoprotein YfiO [Hyphomicrobium
           denitrificans ATCC 51888]
          Length = 309

 Score =  271 bits (693), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 70/222 (31%), Positives = 123/222 (55%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S  +     +++  A   +   +F  A + F    R+ P++  ARKS++M+A+  Y AGK
Sbjct: 59  SALNPDPPSKMFANADAKMSSGSFDDAAKQFEAVDREHPYSPEARKSIVMAAYAYYRAGK 118

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
             +A +  E Y+  +P +K     ++++ MSY   ++    DQ A +  L+    +  R+
Sbjct: 119 TPEAIASAERYVALHPGTKEAPMAHHIIAMSYFDDLKTANRDQTAARKALEQFKILRTRF 178

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
             S Y + A   + +  + LAA+E+E+GRYYL +  YVAAI RF+ V+++Y    H EEA
Sbjct: 179 PESEYSRDADNKIRICMDNLAAQEMEVGRYYLNQHNYVAAINRFKTVVSDYQTTAHVEEA 238

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           +ARLVE+Y+AL ++ EA+   +++   YP   W +    L++
Sbjct: 239 LARLVESYMALGVVTEAQNAAAILGHNYPDSKWYKDSYALLQ 280


>gi|253996249|ref|YP_003048313.1| outer membrane assembly lipoprotein YfiO [Methylotenera mobilis
           JLW8]
 gi|253982928|gb|ACT47786.1| outer membrane assembly lipoprotein YfiO [Methylotenera mobilis
           JLW8]
          Length = 267

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 63/247 (25%), Positives = 109/247 (44%), Gaps = 16/247 (6%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
            L   F ++ C + G   +          T       +Y++    ++++++ KA  YF +
Sbjct: 6   ILAFTFLLSGCAIFGAPTEIDD-------TKGWTAERIYQEGAAKMQDRDYDKAIVYFQK 58

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
               +P    A ++ L +A+  Y       A +  + +I  +P+  NVDY YYL G++  
Sbjct: 59  LESRYPHGKYATQAQLETAYAHYKKQDPVSAVAAADRFIKLHPDHPNVDYAYYLKGLAVF 118

Query: 143 Q---------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
                       +    D RA K        +V RY  S YVK A   +    N L+  E
Sbjct: 119 NERGIIEKLTKQQVSDRDPRALKDSFATFKELVTRYPKSRYVKDATQRMVYLANSLSEHE 178

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           + + RYY+KR  YVAAI R + V+  Y  + H EEA+  ++ AY  + + D   + + ++
Sbjct: 179 LHVARYYMKRKAYVAAINRTKYVIEYYPQSPHVEEALVIMISAYDLMGMDDLKNDTLRVL 238

Query: 254 QERYPQG 260
           +  YP  
Sbjct: 239 KTNYPDS 245


>gi|152980898|ref|YP_001353082.1| competence lipoprotein ComL [Janthinobacterium sp. Marseille]
 gi|151280975|gb|ABR89385.1| competence lipoprotein ComL [Janthinobacterium sp. Marseille]
          Length = 261

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 58/251 (23%), Positives = 103/251 (41%), Gaps = 14/251 (5%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L I        L        +       T      ++Y +A   +   +++KA  +F + 
Sbjct: 2   LKITIVALAFLLSACSLTPDKFDE----TKNWSPSKLYSEAREEMNVGDYAKAVSHFEKL 57

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +PF   A+++ +  A+  Y  G   QA +  E +I  +P+  NVDY+YYL G+    
Sbjct: 58  ESRYPFGTYAQQAQMEIAYAYYRQGDQPQALAAVERFIKLHPDHPNVDYMYYLRGLINFN 117

Query: 144 ----------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
                            D +A +        + ER+ +S Y   A   +    N +A  +
Sbjct: 118 DKVSIFDFVSRQDPTERDPKAAREAFDSFKLLTERFPDSKYTPDATARLAYLVNGMAQYD 177

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           V +  YY +RG Y+AA+ R Q  + NY  A   E A+  ++ +Y AL L     +   ++
Sbjct: 178 VHVANYYYRRGAYLAAVNRAQSAVKNYPGAPAVEGALYVMIRSYDALNLPQLRDDAERVM 237

Query: 254 QERYPQGYWAR 264
           +  +P   + R
Sbjct: 238 KTNFPDSVYFR 248


>gi|163868705|ref|YP_001609917.1| competence lipoprotein precursor [Bartonella tribocorum CIP 105476]
 gi|161018364|emb|CAK01922.1| competence lipoprotein precursor [Bartonella tribocorum CIP 105476]
          Length = 297

 Score =  270 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 87/255 (34%), Positives = 135/255 (52%), Gaps = 1/255 (0%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDS-VTDVRYQREVYEKAVLFLKEQNFSKA 76
            + +  L +    + C L G   +    +   + V  +     +Y + +  L+    + A
Sbjct: 17  NIVRKILGVMLLGSTCMLAGCLFKEKNTLDPSAYVLKIDPPDVLYNQGLASLESGRLADA 76

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            + F +  + + +    RKSL+M AF  Y  GKY  + S+ + YIT YP S +  Y YY+
Sbjct: 77  AKKFLKIEKQYAYTDWGRKSLVMGAFTNYRLGKYDDSISMAQRYITLYPGSTDSAYAYYI 136

Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
           +G+S  + I DV  DQR TK  +  M  ++ERY NS YVK A+  +  GR QLA KE++I
Sbjct: 137 IGLSSFRRIPDVTRDQRDTKRAIAAMQLLIERYPNSEYVKDAKDKIRFGREQLAGKEMQI 196

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           GRYY +   Y+AA  RF+ V+  YSD    EEA+ RL E  +AL L  EA+   +++   
Sbjct: 197 GRYYEEGRRYLAASRRFRTVVEEYSDTNQIEEALFRLTEVNLALGLTAEAQTAAAILGRN 256

Query: 257 YPQGYWARYVETLVK 271
           YPQ  W ++   L++
Sbjct: 257 YPQSEWYKFSYNLLQ 271


>gi|209550164|ref|YP_002282081.1| outer membrane assembly lipoprotein YfiO [Rhizobium leguminosarum
           bv. trifolii WSM2304]
 gi|209535920|gb|ACI55855.1| outer membrane assembly lipoprotein YfiO [Rhizobium leguminosarum
           bv. trifolii WSM2304]
          Length = 281

 Score =  270 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 91/257 (35%), Positives = 150/257 (58%), Gaps = 5/257 (1%)

Query: 19  LYKFALTIFFSI----AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
           + K A  +F S+    A   + G +     D+      +      +Y + +  +K  N +
Sbjct: 1   MMKTARALFASLLVLSAGASISGCQSDPDIDIT-KLGLETDPPDVLYTQGLANMKAGNMA 59

Query: 75  KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
           +A   F+   R+ PF+  ARK+L+MS FV+Y  G+   A + G  Y++QYP+S++  YV 
Sbjct: 60  EAARKFDAIDRENPFSEWARKALVMSTFVKYRQGRLDDALTSGNRYMSQYPKSQDAAYVQ 119

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
           YL+G++Y++ I DV  DQRA+   ++ M  +++ Y NS YV  A+  +   R+QLA KE+
Sbjct: 120 YLIGLTYSKQIVDVTQDQRASAKTIEAMQAVIDNYPNSEYVDDAQAKIRFARDQLAGKEM 179

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
           +IGRYY++R EY+AAI RF++V+  Y +    EEA+ARLVEAY A+ ++DEA+   +++ 
Sbjct: 180 QIGRYYMERKEYLAAISRFRIVVEKYPNTNQIEEALARLVEAYYAMGIVDEAQTAAAVLG 239

Query: 255 ERYPQGYWARYVETLVK 271
             YP   W      L++
Sbjct: 240 HNYPDSQWYADSYKLLQ 256


>gi|241663188|ref|YP_002981548.1| outer membrane assembly lipoprotein YfiO [Ralstonia pickettii 12D]
 gi|240865215|gb|ACS62876.1| outer membrane assembly lipoprotein YfiO [Ralstonia pickettii 12D]
          Length = 285

 Score =  270 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 58/251 (23%), Positives = 109/251 (43%), Gaps = 14/251 (5%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            +   +A   +        +       T      ++Y +A   L   +++KA +Y+ +  
Sbjct: 26  VLVAGVACLAISACGILPEQQDE----TAGWSANKLYSEAKDSLDGGDYAKAVKYYEKLE 81

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
             +PF   A+++ + +A+  Y  G+   A +  + +I  +P   +VDY YYL G+     
Sbjct: 82  SRYPFGPYAQQAQIETAYANYKDGETAAALAAVDRFIQLHPNHPSVDYAYYLKGLINFND 141

Query: 145 ----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
                           D +A +        ++ R+ NS Y   A   +    N +A  EV
Sbjct: 142 NLGWLGRFSNQDLSERDPKAARAAYDAFKTLITRFPNSKYTPDATQRMQYIVNAMAEHEV 201

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
              RYY +RG Y+AA+ R Q  + +Y  A   EEA+  ++++Y AL + D   +   +I+
Sbjct: 202 GAARYYYRRGAYLAAVNRAQDAIKDYDRAPAVEEALYIMMKSYEALGMKDMRDDTERIIK 261

Query: 255 ERYPQGYWARY 265
           + YP+  +  Y
Sbjct: 262 QNYPKSDFLAY 272


>gi|117921610|ref|YP_870802.1| putative lipoprotein [Shewanella sp. ANA-3]
 gi|117613942|gb|ABK49396.1| putative lipoprotein [Shewanella sp. ANA-3]
          Length = 282

 Score =  270 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 59/271 (21%), Positives = 100/271 (36%), Gaps = 17/271 (6%)

Query: 1   MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
           M   L        +  Y+  K    + FS+A           S     + +        +
Sbjct: 15  MEKFLTTTYKELNSSMYKFSKGLTLVLFSLA-------LSACSSSPEDNDIAAKTSPDVL 67

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +A   ++  N+SKA          FPF     +  L   +  Y         +  + +
Sbjct: 68  YSQARTSMELGNYSKAVRSLEALDSRFPFGPHKTQVQLDLIYAYYKMDDVASGIANIDRF 127

Query: 121 ITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYT 170
           I   P   N+DYVYY+ G+   Q           I     D +  +   +   R+++ Y 
Sbjct: 128 IRLNPTHPNIDYVYYMRGLVNMQADSYLFHDMLNIDRTDRDPKNAQDAFKDFDRLIKTYP 187

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
           NS Y   A+  +   +N+LA   +++  YY+K   + AA  R Q VL  Y      E A+
Sbjct: 188 NSKYAADAQKRMLSLKNRLAKYSIQVAEYYIKMNAWSAAAVRAQSVLETYPGTPSTERAL 247

Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             + EAY  L      + V+ ++Q  +P   
Sbjct: 248 EIMAEAYGELGQNQLKQNVLMVMQANFPNNE 278


>gi|237653788|ref|YP_002890102.1| outer membrane assembly lipoprotein YfiO [Thauera sp. MZ1T]
 gi|237625035|gb|ACR01725.1| outer membrane assembly lipoprotein YfiO [Thauera sp. MZ1T]
          Length = 269

 Score =  270 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 10/223 (4%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           T     +++Y +A   + E  + +A   F +    +P+   A+++ L  A+  Y  G+  
Sbjct: 34  TAGWNAQKLYSEAKASMSEGGYDRAVTLFEKLEARYPYGRFAQQAQLEVAYAYYKQGEQA 93

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLMLQY 161
            A +  + +I  +P   NVDY YYL G+        +            D +  +     
Sbjct: 94  LALAAADRFIKLHPNHPNVDYAYYLKGLVNFNEDLGLLAGLSRQDLSERDPKGAREAFDS 153

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
              +VER+  S Y   +R  +    N LA+ EV + RYY  RG YVAAI R Q  + N+ 
Sbjct: 154 FRELVERFPESRYADDSRARMQYLINSLASHEVHVSRYYYNRGAYVAAINRAQTAVNNFP 213

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
            A   EEA+  +V +Y  L +     +   ++++ +P   + R
Sbjct: 214 QAPAIEEALFLMVMSYDKLGMAQLRDDADRVMRKNFPDSVYFR 256


>gi|163741561|ref|ZP_02148952.1| competence lipoprotein ComL, putative [Phaeobacter gallaeciensis
           2.10]
 gi|161385295|gb|EDQ09673.1| competence lipoprotein ComL, putative [Phaeobacter gallaeciensis
           2.10]
          Length = 282

 Score =  270 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 71/252 (28%), Positives = 125/252 (49%), Gaps = 1/252 (0%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +   A TI   + V  L G               +     ++YE+    ++      A  
Sbjct: 4   MGAAAKTIGAVLLVAALSGCGGDGGA-AKSSQPLEGFTPEQIYERGEFEMERNRTEDAAF 62

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
           YF++  R +P++  A+++L+M A+  +    Y+ + +  + YI  YP  ++  Y  YL+ 
Sbjct: 63  YFSEIERLYPYSSWAKQALIMQAYAYHLGRDYEDSRAAAQRYIDFYPTEEDAAYAQYLLA 122

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           +SY   I +V  DQ  T   LQ +  ++E Y +S Y   A     +  + LA KE+EIGR
Sbjct: 123 LSYYDQIDEVGRDQGLTFQALQSLRTVIEVYPDSEYASSAILKFDLAFDHLAGKEMEIGR 182

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           YYL++  Y +A+ RF++V+ ++    H  EA+ RLVEAY++L L++EA+   +++   Y 
Sbjct: 183 YYLRKEHYTSAVNRFRVVVEDFQTTTHTAEALHRLVEAYLSLGLVNEAQTAGAILGHNYQ 242

Query: 259 QGYWARYVETLV 270
              W      L+
Sbjct: 243 STEWYEDSFKLL 254


>gi|167031684|ref|YP_001666915.1| competence lipoprotein ComL [Pseudomonas putida GB-1]
 gi|166858172|gb|ABY96579.1| competence lipoprotein ComL [Pseudomonas putida GB-1]
          Length = 339

 Score =  270 bits (691), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 59/241 (24%), Positives = 105/241 (43%), Gaps = 13/241 (5%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
            + +  L      SS    +D   +   + E+Y++A   L   +++ A          +P
Sbjct: 6   LLLIAILGLTAACSSNKEVID---ENLSEAELYQQAQADLDNSSYTSAVNKLKALESRYP 62

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
           F   A ++ L   +  Y   + + A S  E +I  +P+  NVDY YYL G++     R +
Sbjct: 63  FGRYADQAQLELIYANYKNSEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQDRGL 122

Query: 149 ----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
                       D  A +      +++  R+ NS Y   A+  +   RN LA+ E+ +  
Sbjct: 123 LARFLPLDMTKRDPGAARDSYNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIHVAD 182

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           YYL R  YVAA  R + V+ N+ +     + +A +VE+Y  + L + A   +  ++  YP
Sbjct: 183 YYLSRQAYVAAANRGRYVVENFQETPSVGDGLAVMVESYQKMHLDELAASSLETLKLNYP 242

Query: 259 Q 259
            
Sbjct: 243 D 243


>gi|113971329|ref|YP_735122.1| putative lipoprotein [Shewanella sp. MR-4]
 gi|114048566|ref|YP_739116.1| putative lipoprotein [Shewanella sp. MR-7]
 gi|113886013|gb|ABI40065.1| putative lipoprotein [Shewanella sp. MR-4]
 gi|113890008|gb|ABI44059.1| putative lipoprotein [Shewanella sp. MR-7]
          Length = 282

 Score =  270 bits (691), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 59/271 (21%), Positives = 100/271 (36%), Gaps = 17/271 (6%)

Query: 1   MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
           M   L        +  Y+  K    + FS+A           S     + +        +
Sbjct: 15  MEKFLTTTYKELNSSMYKFSKGLTLVLFSLA-------LSACSSSPEDNDIAAKTSPDVL 67

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +A   ++  N+SKA          FPF     +  L   +  Y         +  + +
Sbjct: 68  YSQARTSMELGNYSKAVRSLEALDSRFPFGPHKTQVQLDLIYAYYKMDDVASGIANIDRF 127

Query: 121 ITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYT 170
           I   P   ++DYVYY+ G+   Q           I     D +  +   +   R+++ Y 
Sbjct: 128 IRLNPTHPDIDYVYYMRGLVNMQADSYLFHDMLNIDRTDRDPKNAQDAFKDFDRLIKTYP 187

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
           NS Y   A+  +   +N+LA   +++  YYLK   + AA  R Q VL  Y      E A+
Sbjct: 188 NSKYAADAQKRMLSLKNRLAKYSIQVAEYYLKMNAWSAAAVRAQSVLETYPGTPSTERAL 247

Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             + EAY  L      + V+ ++Q  +P   
Sbjct: 248 EIMAEAYGELGQNQLKQNVLMVMQANFPNNE 278


>gi|161869645|ref|YP_001598811.1| competence lipoprotein [Neisseria meningitidis 053442]
 gi|161595198|gb|ABX72858.1| competence lipoprotein [Neisseria meningitidis 053442]
 gi|325127791|gb|EGC50699.1| competence lipoprotein comL [Neisseria meningitidis N1568]
 gi|325133783|gb|EGC56439.1| competence lipoprotein comL [Neisseria meningitidis M13399]
 gi|325203790|gb|ADY99243.1| competence lipoprotein comL [Neisseria meningitidis M01-240355]
          Length = 267

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 62/259 (23%), Positives = 115/259 (44%), Gaps = 14/259 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K  LT+   +A   L     Q + D     +T      ++Y +A   L   N+++A +
Sbjct: 1   MKKILLTVSLGLA---LSACATQGTVDKDA-QITQDWSVEKLYAEAQDELNSSNYTRAVK 56

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            +      FP +  AR+S L +A+  Y   +  +A +  E +   +P+  N+DY  YL G
Sbjct: 57  LYEILESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIERFRRLHPQHPNMDYALYLRG 116

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +      +              D +A +   Q  + +V+R+ NS Y   A   +    + 
Sbjct: 117 LVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNSKYAADATARMVKLVDA 176

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           L   E+ + RYY+KRG Y+AA  R Q ++ +Y +  + EE++A L  AY  L     A +
Sbjct: 177 LGGNEISVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESLAILELAYQKLGKPQLAAD 236

Query: 249 VVSLIQERYPQGYWARYVE 267
              +++  +P+  +  +  
Sbjct: 237 TRRVLETNFPKSPFLTHAW 255


>gi|119505581|ref|ZP_01627652.1| competence protein ComL [marine gamma proteobacterium HTCC2080]
 gi|119458524|gb|EAW39628.1| competence protein ComL [marine gamma proteobacterium HTCC2080]
          Length = 336

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 63/270 (23%), Positives = 117/270 (43%), Gaps = 15/270 (5%)

Query: 1   MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLV-GWERQSSRDVYLDSVTDVRYQRE 59
           M  +      +  +   QL + A      +A+  +V G       D+ +        +++
Sbjct: 25  MRTLCLEDYKLLYSDLLQLTRLAARWITLVALITVVSGCSWFGKDDIEIAD----NGEQQ 80

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y +A   L   NF+ A          +PF   A ++ L   +  Y A +++ A    + 
Sbjct: 81  IYLEAQRSLDSGNFNTAIRTLQLLESRYPFGRYAEQAQLELVYAHYGAYEFEAAIEAADR 140

Query: 120 YITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERY 169
           +I  +P+  NVDY YY+ G+S   M            D   D    K      ++++ R+
Sbjct: 141 FIRLHPQHPNVDYAYYMKGLSAFDMEGGFLASFVPTDDTKRDVSHIKEAFAEFAQLLARF 200

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
            +S Y   AR  +   RN LA  EV +  YY +RG Y+AA+ R + V+ +        + 
Sbjct: 201 PDSAYAPDARARMVHMRNMLARHEVHVANYYFRRGAYMAALNRGRYVVEHMQQTPSVADG 260

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQ 259
           +A + +AY+ L   D A++ ++++ E +P 
Sbjct: 261 LAIMAQAYILLDFNDLAKDSIAVLHENFPD 290


>gi|325143910|gb|EGC66220.1| competence lipoprotein comL [Neisseria meningitidis M01-240013]
 gi|325206454|gb|ADZ01907.1| competence lipoprotein comL [Neisseria meningitidis M04-240196]
          Length = 267

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 61/259 (23%), Positives = 115/259 (44%), Gaps = 14/259 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K  LT+   +A   L     + + D     +T      ++Y +A   L   N+++A +
Sbjct: 1   MKKILLTVSLGLA---LSACATKGTVDKDA-QITQDWSVEKLYAEAQDELNSSNYTRAVK 56

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            +      FP +  AR+S L +A+  Y   +  +A +  E +   +P+  N+DY  YL G
Sbjct: 57  LYEILESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIERFRRLHPQHPNMDYALYLRG 116

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +      +              D +A +   Q  + +V+R+ NS Y   A   +    + 
Sbjct: 117 LVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNSKYAADATARMVKLVDA 176

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           L   E+ + RYY+KRG Y+AA  R Q ++ +Y +  + EE++A L  AY  L     A +
Sbjct: 177 LGGNEISVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESLAILELAYQKLGKPQLAAD 236

Query: 249 VVSLIQERYPQGYWARYVE 267
              +++  +P+  +  +  
Sbjct: 237 TRRVLETNFPKSPFLTHAW 255


>gi|296314699|ref|ZP_06864640.1| competence lipoprotein ComL [Neisseria polysaccharea ATCC 43768]
 gi|296838533|gb|EFH22471.1| competence lipoprotein ComL [Neisseria polysaccharea ATCC 43768]
          Length = 267

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 60/259 (23%), Positives = 116/259 (44%), Gaps = 14/259 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + KF LT+   +A   L     + + D     +T      ++Y +A   L   N+++A +
Sbjct: 1   MKKFLLTVSLGLA---LSACATKGTVDKDA-QITQDWSVEKLYAEAQDELNSSNYTRAVK 56

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            +      FP +  A++S L +A+  Y   +  +A +  + +   +P+  N+DY  YL G
Sbjct: 57  LYEILESRFPTSRHAQQSQLDTAYAYYKDDEKDKALAAIDRFRRLHPQHPNMDYALYLRG 116

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +      +              D +A +   Q  + +V+R+ NS Y   A   +    + 
Sbjct: 117 LVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNSKYAADATARMIKLVDA 176

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           L   E+ + RYY+KRG Y+AA  R Q ++ +Y +  + EE++A L  AY  L     A +
Sbjct: 177 LGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESLAILELAYKKLDKPQLAAD 236

Query: 249 VVSLIQERYPQGYWARYVE 267
              +++  +P+  +  +  
Sbjct: 237 THRVLEANFPKSPFLTHAW 255


>gi|254673629|emb|CBA09175.1| competence lipoprotein ComL [Neisseria meningitidis alpha275]
          Length = 267

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 62/259 (23%), Positives = 115/259 (44%), Gaps = 14/259 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K  LT+   +A   L     Q + D     +T      ++Y +A   L   N+++A +
Sbjct: 1   MKKILLTVSLGLA---LSACATQGTVDKDA-QITQDWSVEKLYAEAQDELNSSNYTRAVK 56

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            +      FP +  AR+S L +A+  Y   +  +A +  E +   +P+  N+DY  YL G
Sbjct: 57  LYEILESRFPTSLHARQSQLDTAYAYYKDDEKDKALAAIERFRRLHPQHPNMDYALYLRG 116

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +      +              D +A +   Q  + +V+R+ NS Y   A   +    + 
Sbjct: 117 LVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNSKYAADATVRMVKLVDA 176

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           L   E+ + RYY+KRG Y+AA  R Q ++ +Y +  + EE++A L  AY  L     A +
Sbjct: 177 LGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESLAILELAYQKLGKPQLAAD 236

Query: 249 VVSLIQERYPQGYWARYVE 267
              +++  +P+  +  +  
Sbjct: 237 TRRVLETNFPKSPFLTHAW 255


>gi|17546346|ref|NP_519748.1| hypothetical protein RSc1627 [Ralstonia solanacearum GMI1000]
 gi|17428643|emb|CAD15329.1| probable dna uptake lipoprotein transmembrane [Ralstonia
           solanacearum GMI1000]
          Length = 289

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 58/255 (22%), Positives = 108/255 (42%), Gaps = 14/255 (5%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           +    +   +A   +        +       T      ++Y +A   L   ++SKA +Y+
Sbjct: 26  RIGAVLAAGVACLAISACGIMPEQQDE----TAGWSANKLYSEAKDALDGGDYSKAVKYY 81

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
            +    +PF   A+++ + +A+  Y  G+   A +  + +I  +P   +VDY YYL G+ 
Sbjct: 82  EKLESRYPFGPFAQQAQIETAYANYKDGETAAALAAVDRFIQLHPNHPSVDYAYYLKGLI 141

Query: 141 YAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
                               D +A +        ++ R+ NS Y   A   +    N +A
Sbjct: 142 NFNDNLGWLGRFSNQDLSERDPKAARAAYDAFKTLITRFPNSKYAPDAAQRMQYIVNAMA 201

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
             EV+  RYY +RG Y+AA  R Q  + +Y  A   EE +  ++++Y AL + D   +  
Sbjct: 202 EHEVQAARYYYRRGAYLAATNRAQEAIKDYDRAPAVEEGLYIMMKSYEALGMKDLRDDTE 261

Query: 251 SLIQERYPQGYWARY 265
            +I++ YP   +  Y
Sbjct: 262 RIIKQNYPNSDFLLY 276


>gi|294634725|ref|ZP_06713256.1| competence lipoprotein ComL [Edwardsiella tarda ATCC 23685]
 gi|291091855|gb|EFE24416.1| competence lipoprotein ComL [Edwardsiella tarda ATCC 23685]
          Length = 245

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 64/248 (25%), Positives = 108/248 (43%), Gaps = 17/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +     LVG    SS++   D+        E+Y  A   L++ NF  A  
Sbjct: 1   MTRIKYLVAATTLSLALVGCS--SSKEAVPDNPP-----AEIYATAQQKLQDGNFKAAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y +     A +  + +I   P S+N+ YV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKSADLPMAQATIDRFIRLNPTSQNMPYVLYMRG 113

Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   M          I     D    +   +  S++V+RY NS Y   A   +   +N+
Sbjct: 114 LTDMAMDDSALQGFFGIDRSDRDPEHARQAFRDFSQLVQRYPNSQYSSDATKRLIFLKNR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E+ + R+Y KRG YVA + R + +L NY D +   +A+  +  AY  L LM EA +
Sbjct: 174 LAKHELAVARFYTKRGAYVAVVNRVEQMLRNYPDTQATRDALPLMENAYRQLGLMSEAAK 233

Query: 249 VVSLIQER 256
           V  +I   
Sbjct: 234 VQKIIAFN 241


>gi|312114836|ref|YP_004012432.1| outer membrane assembly lipoprotein YfiO [Rhodomicrobium vannielii
           ATCC 17100]
 gi|311219965|gb|ADP71333.1| outer membrane assembly lipoprotein YfiO [Rhodomicrobium vannielii
           ATCC 17100]
          Length = 287

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 72/251 (28%), Positives = 128/251 (50%), Gaps = 1/251 (0%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKAYEYF 80
            A  I  +     L G     S     +S   D R   ++Y++A   L +   +KA E F
Sbjct: 10  LAAVILATTLSSSLGGCGSMGSMFSSSESTQLDQRPPDQIYKEADDLLGQGKNNKAAELF 69

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
            +  + +P++  A+KS LM+A+    AGK  +A +    +++ +P SK       ++  S
Sbjct: 70  ERIDQLYPYSEEAKKSTLMAAYAYQKAGKGPEAVAAARRFLSLHPGSKEAALAQEIIASS 129

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
           Y + I     DQ  TK  +  +  ++ RY +S Y + A+  + + R+ LAA E+ +GRY+
Sbjct: 130 YFERISGPTRDQGETKKAIAELETLISRYPDSRYSEDAKRRIKLARDTLAASEMNVGRYW 189

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            K+G Y+ A+ RF+ V+  Y    H EEA+ RL E Y+AL +++EA+   +++   +P  
Sbjct: 190 QKKGNYLGAVNRFKTVVTEYQQTTHVEEALMRLTECYMALGIVNEAQTAAAVLGHNFPDS 249

Query: 261 YWARYVETLVK 271
            W +    L++
Sbjct: 250 PWYKDAYALLQ 260


>gi|83745882|ref|ZP_00942939.1| transmembrane protein [Ralstonia solanacearum UW551]
 gi|83727572|gb|EAP74693.1| transmembrane protein [Ralstonia solanacearum UW551]
          Length = 289

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 59/255 (23%), Positives = 109/255 (42%), Gaps = 14/255 (5%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           +    +   +A   +        +       T      ++Y +A   L   ++SKA +Y+
Sbjct: 26  RIGAVMAAGVACLAISACGIMPEQQDE----TAGWSANKLYSEAKDALDGGDYSKAVKYY 81

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
            +    +PF   A+++ + +A+  Y  G+   A +  + +I  +P   +VDY YYL G+ 
Sbjct: 82  EKLESRYPFGPFAQQAQIETAYANYKDGETAAALAAVDRFIQLHPNHPSVDYAYYLKGLI 141

Query: 141 YAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
                               D +A +        ++ R+ NS Y   A   +    N +A
Sbjct: 142 NFNDNLGWLGRFSNQDLSERDPKAARAAYDAFKTLITRFPNSKYTPDAAQRMQYIVNAMA 201

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
             EV+  RYY +RG Y+AA  R Q  + +Y  A   EEA+  ++++Y AL + D   +  
Sbjct: 202 EHEVQAARYYYRRGAYLAATNRAQEAIKDYDRAPAVEEALYIMMKSYEALGMKDLRDDTE 261

Query: 251 SLIQERYPQGYWARY 265
            +I++ YP   +  Y
Sbjct: 262 RIIKQNYPNSNFMLY 276


>gi|71907235|ref|YP_284822.1| putative competence lipoprotein precursor [Dechloromonas aromatica
           RCB]
 gi|71846856|gb|AAZ46352.1| putative competence lipoprotein precursor [Dechloromonas aromatica
           RCB]
          Length = 257

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 59/244 (24%), Positives = 102/244 (41%), Gaps = 14/244 (5%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
           V F+ G    S +       T      ++Y ++     + N+ KA +Y  +    FP+  
Sbjct: 6   VAFIAGCGSTSEKFDE----TSGWSAGKLYSESKDAQADGNWEKAAKYLEKLEARFPYGR 61

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI------ 145
            A+++ L   +V +   +   A +  + +I  +P    VDYVYYL G+            
Sbjct: 62  YAQQAQLELGYVYWKGNEPGSALAACDRFIKLHPSHPTVDYVYYLKGLINFNEDLGLTAY 121

Query: 146 ----RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
                    D +A +        +V R+  S Y   A   +    N LA+ EV + RYY+
Sbjct: 122 ISSQDPTERDPKAAREAFDAFKELVTRFPESKYAPDASLRMNYLVNALASLEVHVARYYV 181

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           KRG Y+AA  R Q  +  Y  A   EEAM  LV +Y  + + +   +   ++++ +P   
Sbjct: 182 KRGAYIAAANRAQFAVKTYPQAPAIEEAMFILVTSYDKMGMNELRDDAQRVMKKNFPNSR 241

Query: 262 WARY 265
           +   
Sbjct: 242 YYND 245



 Score = 45.1 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 43/121 (35%), Gaps = 22/121 (18%)

Query: 75  KAYEYFNQCSRDFPFAGVARKSLLMSAFV-------------QY-SAGKYQQAASLGEEY 120
           +A++ F +    FP +  A  + L   ++              Y   G Y  AA+  +  
Sbjct: 137 EAFDAFKELVTRFPESKYAPDASLRMNYLVNALASLEVHVARYYVKRGAYIAAANRAQFA 196

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +  YP++  ++   +++  SY +M  +   D             + + + NS Y      
Sbjct: 197 VKTYPQAPAIEEAMFILVTSYDKMGMNELRD--------DAQRVMKKNFPNSRYYNDGLE 248

Query: 181 Y 181
            
Sbjct: 249 R 249


>gi|296445566|ref|ZP_06887522.1| outer membrane assembly lipoprotein YfiO [Methylosinus
           trichosporium OB3b]
 gi|296256971|gb|EFH04042.1| outer membrane assembly lipoprotein YfiO [Methylosinus
           trichosporium OB3b]
          Length = 292

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 80/228 (35%), Positives = 126/228 (55%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
           S + Y   +       ++Y +A+  L+ +++  A + F +  + +PF+  ARK LLM  F
Sbjct: 40  SGEKYKTELLPDIPAEDIYNQALAKLEAKDYETAAKKFGELEKQYPFSHWARKGLLMQTF 99

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
            QYS   Y  A +  + YI  YP S    Y+YYL GMSY   +  V  DQ   +  L   
Sbjct: 100 AQYSKPSYDDAVASAQRYIGLYPTSPETPYMYYLAGMSYYNQVPGVMQDQETAQKALVIF 159

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
           +++VE++  S YV   ++ + V R+QLAAK++ +GR+YL R  Y AA+ RF  VLA Y  
Sbjct: 160 NQLVEKFPKSEYVADVKYKIQVARDQLAAKDMSVGRFYLTRKNYPAAVNRFHDVLAKYQT 219

Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
             HAEEA+ RL EAY A+ +++EA+   +++   +P   W +    L+
Sbjct: 220 TRHAEEALYRLTEAYFAMGIVNEAQTAAAILGHNFPDSQWYKDAHELL 267


>gi|254482813|ref|ZP_05096050.1| outer membrane assembly lipoprotein YfiO [marine gamma
           proteobacterium HTCC2148]
 gi|214036894|gb|EEB77564.1| outer membrane assembly lipoprotein YfiO [marine gamma
           proteobacterium HTCC2148]
          Length = 289

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 62/249 (24%), Positives = 113/249 (45%), Gaps = 17/249 (6%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           K+AL    S+ +    G       +  L  +     ++++YE+A  +L+ +N++ A    
Sbjct: 2   KYALVFLLSLIIIGCSG-------NDELPDIAADTGEQQIYEEAQRYLRNKNWNLAVRSL 54

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
                 +PF   A +S L   +  Y+  ++  A    E +I  +P   NVDY YY+ G++
Sbjct: 55  QVLESRYPFGKYAEQSQLEIIYAHYNGYEHDAAVEAAERFIRLHPAHPNVDYAYYMKGLA 114

Query: 141 YAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
                 D+            D    K      +++V R+ +SPY   AR  +   RN LA
Sbjct: 115 AFAGNDDIFSRFLPTDESERDVSQAKEAFAEFNQLVSRFPDSPYAPDARARMVHLRNLLA 174

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
             E+ +  YY +RG Y+AA  R + V+ N+       + +A + + Y+ L L D A++ +
Sbjct: 175 RHEILVANYYFRRGAYMAATNRGRYVVENFQRTPAVADGLAVMAQGYILLGLEDLAKDTI 234

Query: 251 SLIQERYPQ 259
            ++   YP+
Sbjct: 235 GILAMNYPE 243


>gi|103486038|ref|YP_615599.1| DNA uptake lipoprotein [Sphingopyxis alaskensis RB2256]
 gi|98976115|gb|ABF52266.1| DNA uptake lipoprotein [Sphingopyxis alaskensis RB2256]
          Length = 264

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 79/248 (31%), Positives = 127/248 (51%), Gaps = 7/248 (2%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
             I   +A C   G  +Q +R V  D  T       +Y  A   L    +  A   F++ 
Sbjct: 18  FVITPMLAACAGGGGVKQDTRYVARDVNT-------LYRAAQERLDRGQYGIAAALFDEV 70

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
            R  P++  AR++ LMS+F  Y   +Y  A    + ++  +P +K+  Y YYL+ +SY +
Sbjct: 71  ERQHPYSPWARRAQLMSSFSYYMDREYTPAIEAAQRFLAIHPGNKDAPYAYYLIALSYYE 130

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
            I DV  DQR T+     +  IV RY +S Y   AR  + + ++ LA KE+EIGR+Y + 
Sbjct: 131 QISDVTRDQRITQQAQAALGEIVRRYPDSRYAADARLKLDLVQDHLAGKEMEIGRFYQRS 190

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
             ++AA  RF+ V+  Y    HA EA+ RL E+Y+AL + +EA++  +++   YP   W 
Sbjct: 191 SNWLAASIRFREVVDKYQTTSHAPEALYRLTESYLALGIPEEAKKSAAVLGANYPGNEWY 250

Query: 264 RYVETLVK 271
                L++
Sbjct: 251 ERAYKLMQ 258


>gi|110680523|ref|YP_683530.1| competence lipoprotein ComL, putative [Roseobacter denitrificans
           OCh 114]
 gi|109456639|gb|ABG32844.1| competence lipoprotein ComL, putative [Roseobacter denitrificans
           OCh 114]
          Length = 288

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 71/251 (28%), Positives = 123/251 (49%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           +     +   +A C         +     +   +     +++E+    L       A  Y
Sbjct: 10  FSAVALLIVGMAGCTSDPGRTTGTIFNPQEVPLEAFEAEQIFERGEFELTRNRPDDAAFY 69

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
           F +  R +P++  AR++L+M AF  +    Y  + S  + +I  YP+  +  Y  YL+ +
Sbjct: 70  FAEIERLYPYSDWARRALIMQAFSYHQDQDYPNSRSAAQRFIDFYPDDDDAAYAQYLLAL 129

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           SY   I +V  DQ  T   LQ + + +ERY +S Y + +     +  + LA KE+EIGRY
Sbjct: 130 SYYDQIDEVGRDQGLTFQALQALRQTIERYPDSEYARSSILKFDLAFDHLAGKEMEIGRY 189

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           YL+R  + AAI RF++V+ ++    H  EA+ RLVEAY++L L D+A+   +++   Y  
Sbjct: 190 YLRRDHFAAAINRFRVVVEDFQTTSHTPEALHRLVEAYLSLGLTDQAQTAAAILGYNYQS 249

Query: 260 GYWARYVETLV 270
             W +    L+
Sbjct: 250 TVWYQDSFALL 260


>gi|84686348|ref|ZP_01014242.1| Putative ComL lipoprotein [Maritimibacter alkaliphilus HTCC2654]
 gi|84665531|gb|EAQ12007.1| Putative ComL lipoprotein [Rhodobacterales bacterium HTCC2654]
          Length = 297

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 76/251 (30%), Positives = 130/251 (51%), Gaps = 3/251 (1%)

Query: 23  ALTIFFSIAVCFLVGWERQSSR---DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
            L +  ++A C   G     S    D       +     ++Y +A   L+  ++ +A ++
Sbjct: 19  TLALVVTLAGCSGTGLGTAFSNLFGDDRETKPIEDYTAEQIYARAEYDLENNDYDEAAKW 78

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
           F +  R +P+  +A+++L+M AF  +  G+Y+ A +  + ++  YP  ++  Y  YL+ +
Sbjct: 79  FGEVERVYPYTQLAKRALIMQAFAHHKDGEYELARAAAQRFVDFYPGDEDAGYATYLLAL 138

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           SY   I DV  DQ  T   LQ +  ++E Y ++ Y + A     +  + LAAKE+EIGRY
Sbjct: 139 SYYDQIEDVGRDQGLTYQALQALRDVIELYPDTEYARSAILKFDLAYDHLAAKEMEIGRY 198

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           YLKR  Y AA+ RF++V+  +       EA+ RLVE+YV+L L DEA    +++   Y  
Sbjct: 199 YLKRKHYAAAVNRFRVVVEQFQTTTQTPEALHRLVESYVSLGLSDEAETAGAILGYNYQS 258

Query: 260 GYWARYVETLV 270
             W +    L+
Sbjct: 259 TEWYQDSYNLL 269


>gi|269140176|ref|YP_003296877.1| lipoprotein [Edwardsiella tarda EIB202]
 gi|267985836|gb|ACY85665.1| lipoprotein [Edwardsiella tarda EIB202]
 gi|304560009|gb|ADM42673.1| Putative lipoprotein assembly complex component [Edwardsiella tarda
           FL6-60]
          Length = 245

 Score =  269 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 62/248 (25%), Positives = 107/248 (43%), Gaps = 17/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +     LVG    SS++   D+        E+Y  A   L++ NF  A  
Sbjct: 1   MTRIKYLVAATTLSLALVGCS--SSKEAVPDNPP-----AEIYATAQQKLQDGNFKAAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y +     A +  + +I   P S+N+ YV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKSADLPMAQATIDRFIRLNPTSQNMPYVLYMRG 113

Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   M          I     D    +   +  S++V+RY NS Y   A   +   +N+
Sbjct: 114 LTDMAMDDSALQGFFGIDRSDRDPEHARQAFRDFSQLVQRYPNSAYTTDATKRLLFLKNR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E+ + R+Y KRG YVA + R + +L NY D +   +A+  +  AY  + L  EA +
Sbjct: 174 LAKHELAVARFYTKRGAYVAVVNRVEQMLRNYPDTQATRDALPLMENAYRQMGLNGEADK 233

Query: 249 VVSLIQER 256
           V  +I   
Sbjct: 234 VQKIIAFN 241


>gi|254474921|ref|ZP_05088307.1| lipoprotein [Ruegeria sp. R11]
 gi|214029164|gb|EEB69999.1| lipoprotein [Ruegeria sp. R11]
          Length = 282

 Score =  269 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 71/252 (28%), Positives = 126/252 (50%), Gaps = 1/252 (0%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +   A TI   + +  L G               +     ++YE+    ++      A  
Sbjct: 4   MGAAAKTIGAFLLIAALSGCGGDGGA-AKSAQPLEGFTPEQIYERGEFEMERNRTKDAAF 62

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
           YF +  R +P++  A+++L+M A+  +    Y+++ +  + YI  YP  ++  Y  YL+ 
Sbjct: 63  YFAEIERLYPYSSWAKQALIMQAYAYHLGRDYEESRAAAQRYIDFYPTEEDAAYAQYLLA 122

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           +SY   I +V  DQ  T   LQ +  ++E Y +S Y   A     +  + LA KE+EIGR
Sbjct: 123 LSYYDQIDEVGRDQGLTFQALQSLRTVIEVYPDSEYANSAILKFDLAFDHLAGKEMEIGR 182

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           YYL++G Y +A+ RF++V+ ++    H  EA+ RLVEAY++L L++EA+   +++   Y 
Sbjct: 183 YYLRKGHYTSAVNRFRVVVEDFQTTTHTAEALHRLVEAYLSLGLVNEAQTAGAILGHNYQ 242

Query: 259 QGYWARYVETLV 270
              W      L+
Sbjct: 243 STEWYEDSFKLL 254


>gi|91205917|ref|YP_538272.1| DNA uptake lipoprotein [Rickettsia bellii RML369-C]
 gi|157826722|ref|YP_001495786.1| DNA uptake lipoprotein [Rickettsia bellii OSU 85-389]
 gi|91069461|gb|ABE05183.1| DNA uptake lipoprotein [Rickettsia bellii RML369-C]
 gi|157802026|gb|ABV78749.1| DNA uptake lipoprotein [Rickettsia bellii OSU 85-389]
          Length = 253

 Score =  269 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 74/248 (29%), Positives = 124/248 (50%), Gaps = 3/248 (1%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L    S  +C  +      S+    D VT +     +Y + V  L+++ +  A E F + 
Sbjct: 3   LAKILSALLCLGLILNGCKSKKSNDDLVTPIST---LYNEGVTLLEKKKYKNAAEEFEKI 59

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
               P      ++ LM A+  + A +Y++A  + + +I  +P + ++ Y YYL  +SY  
Sbjct: 60  FYQHPGNEFTPQAELMQAYSLFLAAQYEEAVDVLDIFINLHPANVDIAYAYYLKALSYYM 119

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
           +I DV +DQ  T L       ++ ++ N+ Y   +   + +  + LA KE+ IGR+YLK+
Sbjct: 120 LISDVNHDQSRTFLAKDSFEDLITKFPNTKYAIDSSLKIDLVNDHLAGKELTIGRFYLKK 179

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
              +AAI RF+ V+ NY    H  EA+ RL E+Y+ L L DEA +  S++   YP   W 
Sbjct: 180 KNPMAAINRFEEVVENYQTTSHCVEALYRLTESYMMLGLSDEAMKYASVLGHNYPDSKWY 239

Query: 264 RYVETLVK 271
            Y   L+K
Sbjct: 240 SYAYKLIK 247


>gi|319899149|ref|YP_004159242.1| competence lipoprotein precursor [Bartonella clarridgeiae 73]
 gi|319403113|emb|CBI76671.1| competence lipoprotein precursor [Bartonella clarridgeiae 73]
          Length = 306

 Score =  269 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 82/253 (32%), Positives = 128/253 (50%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K  + IF     C      +  +       V  +     +Y +A+  L     ++A +
Sbjct: 28  VRKVLIGIFLGGTCCLAGCLGKGKNVLDPSVHVLKIDPPDVLYNQALANLDAGRLNEAAK 87

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            F    + + +    RK+L+M AF  Y   KY  A S+ + YI+ YP + +  Y YY++G
Sbjct: 88  KFAIIEKQYAYTEWGRKALVMGAFTNYRLAKYDDAISMAQHYISLYPLADDSAYAYYIIG 147

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           +S  + I DV  DQR TK  +  M  ++ERY  S YV  A+  +  GR QLA KE++IGR
Sbjct: 148 LSSFRRIPDVTRDQRDTKRAIAAMQLLIERYPQSEYVSDAKAKIRFGREQLAGKEMQIGR 207

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           YY +  +Y+AA  RF+ V+  YSD    EEA+ RL E   AL L  EA+   +++   YP
Sbjct: 208 YYEEGQQYLAASRRFRTVIEEYSDTNQIEEALFRLTEVNFALGLTMEAQTAAAILGRNYP 267

Query: 259 QGYWARYVETLVK 271
              W ++   L++
Sbjct: 268 GSKWYKFSYDLLQ 280


>gi|238791394|ref|ZP_04635033.1| hypothetical protein yinte0001_31510 [Yersinia intermedia ATCC
           29909]
 gi|238729527|gb|EEQ21042.1| hypothetical protein yinte0001_31510 [Yersinia intermedia ATCC
           29909]
          Length = 240

 Score =  269 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 60/240 (25%), Positives = 106/240 (44%), Gaps = 15/240 (6%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
             + A   LV     S++DV  D+        E+Y  A   L++ NF  A          
Sbjct: 4   LVAAATLSLVLTGCSSNKDVVPDNPP-----SELYATAQQKLQDGNFKGAITQLEALDNR 58

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM-- 144
           +PF   +++  L   +  Y +     A +  + ++   P   N+DYV Y+ G++   +  
Sbjct: 59  YPFGPYSQQVQLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVLYMRGLTDMALDD 118

Query: 145 --------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
                   I     D +  K   +  +++++ Y NS Y   A+  +T  +N+LA  E+ +
Sbjct: 119 SALQGFFGIDRSDRDPQHAKAAFRDFNQLIQNYPNSQYATDAQKRLTFLKNRLAKHELAV 178

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            +YY KRG YVA + R + +L +Y D +   +A+  +  AY  L L  EA +V  +I   
Sbjct: 179 AQYYTKRGAYVAVVNRVEQMLRDYPDTQATRDALPLMENAYKQLQLNAEADKVAKIIAAN 238


>gi|261377889|ref|ZP_05982462.1| competence lipoprotein ComL [Neisseria cinerea ATCC 14685]
 gi|269145742|gb|EEZ72160.1| competence lipoprotein ComL [Neisseria cinerea ATCC 14685]
          Length = 267

 Score =  269 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 59/260 (22%), Positives = 115/260 (44%), Gaps = 14/260 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K  LT+   +A   L     + + D     +T      ++Y +A   L   N+++A +
Sbjct: 1   MKKILLTVSLGLA---LSACATKGTVDKDA-QITQDWSVEKLYAEAQDELNSSNYTRAVK 56

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            +      FP +  A++S L +A+  Y   +  +A +  + +   +P+  N+DY  YL G
Sbjct: 57  LYEILESRFPTSRHAQQSQLDTAYAYYKDDEKDKALAAIDRFRRLHPQHPNMDYALYLRG 116

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +      +              D +A +   Q  + +V+R+ NS Y   A   +    + 
Sbjct: 117 LVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNSKYAADATARMIKLVDA 176

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           L   E+ + RYY+KRG Y+AA  R Q ++ +Y +  + EE++A L  AY  L     A +
Sbjct: 177 LGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESLAILELAYKKLDKPQLAAD 236

Query: 249 VVSLIQERYPQGYWARYVET 268
              +++  +P+  + +    
Sbjct: 237 THRVLEANFPKSPFLKQPWR 256


>gi|238760704|ref|ZP_04621825.1| hypothetical protein yaldo0001_36270 [Yersinia aldovae ATCC 35236]
 gi|238701077|gb|EEP93673.1| hypothetical protein yaldo0001_36270 [Yersinia aldovae ATCC 35236]
          Length = 240

 Score =  269 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 59/240 (24%), Positives = 105/240 (43%), Gaps = 15/240 (6%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
             + A   LV     S++DV  D+        E+Y  A   L++ NF  A          
Sbjct: 4   LVAAATLSLVLTGCSSNKDVVPDNPP-----SELYATAQQKLQDGNFKGAITQLEALDNR 58

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM-- 144
           +PF   +++  L   +  Y +     A +  + ++   P   N+DYV Y+ G++   +  
Sbjct: 59  YPFGPYSQQVQLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVLYMRGLTDMALDD 118

Query: 145 --------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
                   I     D +  K   +  +++++ Y NS Y   A+  +   +N+LA  E+ +
Sbjct: 119 SALQGFFGIDRSDRDPQHAKAAFRDFNQLIQSYPNSQYATDAQKRLVFLKNRLAKHELAV 178

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            +YY KRG YVA + R + +L +Y D +   +A+  +  AY  L L  EA +V  +I   
Sbjct: 179 AQYYTKRGAYVAVVNRVEQMLRDYPDTQATHDALPLMENAYKQLQLNAEADKVAKIIAAN 238


>gi|126461561|ref|YP_001042675.1| TPR repeat-containing protein [Rhodobacter sphaeroides ATCC 17029]
 gi|221638526|ref|YP_002524788.1| hypothetical protein RSKD131_0427 [Rhodobacter sphaeroides KD131]
 gi|332557550|ref|ZP_08411872.1| Tetratricopeptide TPR_2 repeat protein precursor [Rhodobacter
           sphaeroides WS8N]
 gi|126103225|gb|ABN75903.1| Tetratricopeptide TPR_2 repeat protein [Rhodobacter sphaeroides
           ATCC 17029]
 gi|221159307|gb|ACM00287.1| Tetratricopeptide TPR_2 repeat protein precursor [Rhodobacter
           sphaeroides KD131]
 gi|332275262|gb|EGJ20577.1| Tetratricopeptide TPR_2 repeat protein precursor [Rhodobacter
           sphaeroides WS8N]
          Length = 278

 Score =  269 bits (688), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 76/253 (30%), Positives = 134/253 (52%), Gaps = 5/253 (1%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ-NFSKAY 77
           +   A  +  ++ V  + G    S ++  L++ T      ++Y++    L+ +    +A 
Sbjct: 2   VKSGARLLGTALCVALVAGCGGGSQKEPPLENFT----AEQIYQRGEYELEARTKPDRAI 57

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
            YF++  R +P+   A+++L+M A+  + A  Y++A    + ++  YP  ++  Y  YL+
Sbjct: 58  RYFSEVERLYPYTEWAKRALIMQAYSYHKAKDYEEARGAAQRFLDFYPGDEDAAYAQYLL 117

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
            +SY   I +V  DQ  T   LQ +  ++E Y  S Y + A     +  + LAAKE+EIG
Sbjct: 118 ALSYYDQIDEVGRDQGLTFQALQALRVVIEDYPESEYAQSAILKFDLAFDHLAAKEMEIG 177

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           RYYLKRG Y AAI RF+ V+ ++    H  EA+ RLVE+Y+AL L++EA+   +++   Y
Sbjct: 178 RYYLKRGHYTAAINRFRTVVEDFQTTTHTAEALHRLVESYLALGLVNEAQTAGAILGHNY 237

Query: 258 PQGYWARYVETLV 270
               +      L+
Sbjct: 238 RSSPFYEDSYKLL 250


>gi|297183891|gb|ADI20013.1| DNA uptake lipoprotein [uncultured gamma proteobacterium
           EB000_65A11]
          Length = 285

 Score =  269 bits (688), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 62/247 (25%), Positives = 112/247 (45%), Gaps = 13/247 (5%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           ++ +   +++ FL G     + +   D       + E Y+ +   L+  N+  A E    
Sbjct: 9   SIAMLSLLSLIFLAGCSSDKAEEGEEDI---DATELEYYKMSQSALRSGNYQTAVERLQF 65

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
               FPF   A ++ L   +  Y + + + A +  + +I  +P+  NVDY YYL GM+  
Sbjct: 66  LEARFPFGRYAEQAQLEIIYAYYKSAQSESARAAADRFIRLHPQHPNVDYAYYLRGMASF 125

Query: 143 QMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
               +             D  A +      S++++R+ NS Y   A++ +   RN LA  
Sbjct: 126 DEDTNFLEKFIPMNAATRDPGAARDSFNDFSQLIKRFPNSQYAPDAQYRMIYLRNLLAEY 185

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           E+ + RYY+ RG Y+AA  R + V  N+ +     + +A +VEAY  L +   A E + +
Sbjct: 186 EINVARYYIYRGAYIAAANRGRHVFENFQETPSVPDGLAIMVEAYTLLNMETLASEALMV 245

Query: 253 IQERYPQ 259
           + E +P 
Sbjct: 246 LSENFPD 252



 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 29/70 (41%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           L+ G Y  A+ R Q + A +    +AE+A   ++ AY   A  + AR         +PQ 
Sbjct: 51  LRSGNYQTAVERLQFLEARFPFGRYAEQAQLEIIYAYYKSAQSESARAAADRFIRLHPQH 110

Query: 261 YWARYVETLV 270
               Y   L 
Sbjct: 111 PNVDYAYYLR 120


>gi|218547882|ref|YP_002381673.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           fergusonii ATCC 35469]
 gi|218355423|emb|CAQ88031.1| putative lipoprotein [Escherichia fergusonii ATCC 35469]
 gi|324111236|gb|EGC05218.1| outer membrane assembly lipoprotein YfiO [Escherichia fergusonii
           B253]
 gi|325496331|gb|EGC94190.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           fergusonii ECD227]
          Length = 245

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 51/252 (20%), Positives = 100/252 (39%), Gaps = 17/252 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +    FL G     S++   D+        E+Y  A   L++ N+ +A  
Sbjct: 1   MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWKQAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y       A +  + +I   P   N+DYV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   +                D +  +      S++V  Y NS Y   A   +   +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E  +  YY +RG +VA + R + +L +Y D +   +A+  +  AY  + +  +A +
Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEK 233

Query: 249 VVSLIQERYPQG 260
           V  +I       
Sbjct: 234 VAKIIATNSSNS 245


>gi|238765379|ref|ZP_04626303.1| hypothetical protein ykris0001_45070 [Yersinia kristensenii ATCC
           33638]
 gi|238696421|gb|EEP89214.1| hypothetical protein ykris0001_45070 [Yersinia kristensenii ATCC
           33638]
          Length = 240

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 60/240 (25%), Positives = 106/240 (44%), Gaps = 15/240 (6%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
             + A   LV     S++DV  D+        E+Y  A   L++ NF  A          
Sbjct: 4   LVAAATLSLVLTGCSSNKDVVPDNPP-----SELYATAQQKLQDGNFKGAITQLEALDNR 58

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM-- 144
           +PF   +++  L   +  Y +     A +  + ++   P   N+DYV Y+ G++   +  
Sbjct: 59  YPFGPYSQQVQLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVLYMRGLTDMALDD 118

Query: 145 --------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
                   I     D +  K   +  +++++ Y NS Y   A+  +T  +N+LA  E+ +
Sbjct: 119 SALQGFFGIDRSDRDPQHAKAAFRDFNQLIQSYPNSQYATDAQKRLTFLKNRLAKHELAV 178

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            +YY KRG YVA + R + +L +Y D +   +A+  +  AY  L L  EA +V  +I   
Sbjct: 179 AQYYTKRGAYVAVVNRVEQMLRDYPDTQATRDALPLMENAYKQLQLNAEADKVAKIIAAN 238


>gi|15676601|ref|NP_273745.1| competence lipoprotein [Neisseria meningitidis MC58]
 gi|18203154|sp|Q9K0B1|COML_NEIMB RecName: Full=Competence lipoprotein ComL; Flags: Precursor
 gi|7225932|gb|AAF41120.1| competence lipoprotein ComL [Neisseria meningitidis MC58]
 gi|316983680|gb|EFV62661.1| competence lipoprotein comL [Neisseria meningitidis H44/76]
 gi|325200612|gb|ADY96067.1| competence lipoprotein comL [Neisseria meningitidis H44/76]
          Length = 267

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 60/260 (23%), Positives = 115/260 (44%), Gaps = 14/260 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K  LT+   +A   L     Q + D     +T      ++Y +A   L   N+++A +
Sbjct: 1   MKKILLTVSLGLA---LSACATQGTVDKDA-QITQDWSVEKLYAEAQDELNSSNYTRAVK 56

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            +      FP +  A++S L +A+  Y   +  +A +  + +   +P+  N+DY  YL G
Sbjct: 57  LYEILESRFPTSRHAQQSQLDTAYAYYKDDEKDKALAAIDRFRRLHPQHPNMDYALYLRG 116

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +      +              D +A +   Q  + +V+R+ NS Y   A   +    + 
Sbjct: 117 LVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNSKYAADATARMVKLVDA 176

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           L   E+ + RYY+KRG Y+AA  R Q ++ +Y +  + EE++A L  AY  L     A +
Sbjct: 177 LGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESLAILELAYKKLDKPRLAAD 236

Query: 249 VVSLIQERYPQGYWARYVET 268
              +++  +P+  + +    
Sbjct: 237 TRRVLETNFPKSPFLKQPWR 256


>gi|145589103|ref|YP_001155700.1| putative transmembrane protein [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145047509|gb|ABP34136.1| putative transmembrane protein [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 295

 Score =  268 bits (687), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 62/249 (24%), Positives = 112/249 (44%), Gaps = 14/249 (5%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
           FAL +    A+  L G      +       TD+  + ++Y +A   + + +F+K  +YF 
Sbjct: 30  FALLLAIIFALILLGGCAGSEGKKDD----TDIWPEAKLYSEATDKMNDADFAKCGKYFE 85

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
           +    FPF   ++++ + SA+  + A +  QA    + +I  +  S  +DY YYL G+  
Sbjct: 86  KLEARFPFGPYSQQAQINSAYCYWKAQEQAQALIAIDRFIKLHQGSPTLDYAYYLKGLIT 145

Query: 142 AQMI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
                              D +A K   +    +V+R+ +S Y   +   +    N LA 
Sbjct: 146 FNDDLGWLGNFTGQDLSERDPKAAKEAFESFKTVVDRFPDSKYAPDSLDRMRYIVNSLAE 205

Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
            +V + R+Y +RG Y+A+  R QLV+ +Y  A   EEA+  LV++Y  L L   + +   
Sbjct: 206 ADVNVARFYYQRGAYLASANRAQLVIRDYDRAPAVEEALYILVKSYEKLGLTQLSNDSAR 265

Query: 252 LIQERYPQG 260
           +    +P  
Sbjct: 266 VFALNFPDS 274


>gi|319943654|ref|ZP_08017935.1| competence lipoprotein ComL [Lautropia mirabilis ATCC 51599]
 gi|319742887|gb|EFV95293.1| competence lipoprotein ComL [Lautropia mirabilis ATCC 51599]
          Length = 359

 Score =  268 bits (687), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 60/249 (24%), Positives = 102/249 (40%), Gaps = 16/249 (6%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           +    A   L G              T      ++Y  A   L   N++ A +   +   
Sbjct: 55  LAVVAAGVLLAGCAATDKD------PTTNWTAEQLYADAKADLDAGNWTSAIKGMERLES 108

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM- 144
            +PF   A+++ L  A+  Y  G   +A S  + +I  +P  + +DY YYL G+      
Sbjct: 109 RYPFGSYAQQAQLDIAWAHYKEGDRAEALSAIDRFIRLHPAHERLDYAYYLKGLVNFSNG 168

Query: 145 ---------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
                          D  AT+       ++V R+  S Y + +   +    N +A+ EV 
Sbjct: 169 TGLIARWAGQDASERDLAATREAYDAFQQVVNRFPQSRYREDSIARMRSLVNSMASGEVH 228

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           + R+YL RG YVA+  R Q VL++Y      E+A+  L  +Y  L L D   + V ++  
Sbjct: 229 VARFYLSRGAYVASANRAQGVLSSYQGTPATEDALNILATSYDRLNLPDLRDDTVRVLAR 288

Query: 256 RYPQGYWAR 264
            +PQ  + +
Sbjct: 289 TWPQSAYLK 297


>gi|74316827|ref|YP_314567.1| putative competence lipoprotein [Thiobacillus denitrificans ATCC
           25259]
 gi|74056322|gb|AAZ96762.1| putative competence lipoprotein precursor [Thiobacillus
           denitrificans ATCC 25259]
          Length = 281

 Score =  268 bits (687), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 96/226 (42%), Gaps = 10/226 (4%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
            +   T     +++Y +A   L E N+ +A + F      +PF   A+++ L  A+  Y 
Sbjct: 41  EVKDETTGWSAQKLYAEAKDNLNEGNYERAVKLFETLESRYPFGRYAQQAQLEVAYAYYK 100

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPYDQRATK 156
             +   A +  + +I  +P   NVDY YYL G++                    D RA +
Sbjct: 101 DNEPISAVAACDRFIKLHPNHPNVDYAYYLKGLANFNDDLGLLGNLVDQDMSERDPRAAR 160

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                   +  R+  S Y   A   +    N LA  EV + +YYLKR  YVAA  R + V
Sbjct: 161 DAFLAFKELATRFPQSIYAADATARMKYLVNALANNEVHVAKYYLKRKAYVAAANRAKEV 220

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           L  Y +A   EEA+A +  +Y  L L +   +   ++   +P   +
Sbjct: 221 LKTYPEAPALEEALAIMALSYDRLKLPELRDDARRVLTLNFPNSKY 266


>gi|77462668|ref|YP_352172.1| putative ComL lipoprotein [Rhodobacter sphaeroides 2.4.1]
 gi|77387086|gb|ABA78271.1| Putative ComL lipoprotein [Rhodobacter sphaeroides 2.4.1]
          Length = 278

 Score =  268 bits (687), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 76/253 (30%), Positives = 134/253 (52%), Gaps = 5/253 (1%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ-NFSKAY 77
           +   A  +  ++ V  + G    S ++  L++ T      ++Y++    L+ +    +A 
Sbjct: 2   VKSGARLLGTALCVALMAGCGGGSQKEPPLENFT----AEQIYQRGEYELEARTKPDRAI 57

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
            YF++  R +P+   A+++L+M A+  + A  Y++A    + ++  YP  ++  Y  YL+
Sbjct: 58  RYFSEVERLYPYTEWAKRALIMQAYSYHKAKDYEEARGAAQRFLDFYPGDEDAAYAQYLL 117

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
            +SY   I +V  DQ  T   LQ +  ++E Y  S Y + A     +  + LAAKE+EIG
Sbjct: 118 ALSYYDQIDEVGRDQGLTFQALQALRVVIEDYPESEYAQSAILKFDLAFDHLAAKEMEIG 177

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           RYYLKRG Y AAI RF+ V+ ++    H  EA+ RLVE+Y+AL L++EA+   +++   Y
Sbjct: 178 RYYLKRGHYTAAINRFRTVVEDFQTTTHTAEALHRLVESYLALGLVNEAQTAGAILGHNY 237

Query: 258 PQGYWARYVETLV 270
               +      L+
Sbjct: 238 RSSPFYEDSYKLL 250


>gi|85708862|ref|ZP_01039928.1| DNA uptake lipoprotein [Erythrobacter sp. NAP1]
 gi|85690396|gb|EAQ30399.1| DNA uptake lipoprotein [Erythrobacter sp. NAP1]
          Length = 266

 Score =  268 bits (687), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 72/251 (28%), Positives = 120/251 (47%), Gaps = 3/251 (1%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
            +    +        L      S+ +       DV     +Y +A   L   N + A   
Sbjct: 9   TRLTRAVLIGAGFATLAACGGGSAEEDVAYVARDVES---LYAEAQRRLDRGNTTLAAAL 65

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
           F++  R  P++  AR++ LMSAF  Y A  Y +A    + +++ +P +K+  Y YYL+ +
Sbjct: 66  FDEVERQHPYSPWARRAQLMSAFCYYIARDYNKAIQNSQRFLSIHPGNKDAPYAYYLIAL 125

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           SY + I DV  DQ  T+     +  +  R+  + Y   AR  + +  + LA KE+EIGR+
Sbjct: 126 SYYEQISDVNRDQSITEQAQIALREVNRRFPQTEYAADARLKLDLVADHLAGKEMEIGRF 185

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           Y + G ++AA  RF+ V+  Y    H  EA+ RL E+ +AL + +EA +  +++   YP 
Sbjct: 186 YQRSGRWLAAQLRFRNVVETYETTSHTPEALYRLTESSLALGIREEAVKYAAVLGANYPG 245

Query: 260 GYWARYVETLV 270
             W      LV
Sbjct: 246 TEWYDKAYELV 256


>gi|123441244|ref|YP_001005231.1| outer membrane protein assembly complex subunit YfiO [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|332160280|ref|YP_004296857.1| outer membrane protein assembly complex subunit YfiO [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|122088205|emb|CAL10993.1| putative lipoprotein [Yersinia enterocolitica subsp. enterocolitica
           8081]
 gi|318604492|emb|CBY25990.1| putative component of the lipoprotein assembly complex (forms a
           complex with YaeT, YfgL, and NlpB) [Yersinia
           enterocolitica subsp. palearctica Y11]
 gi|325664510|gb|ADZ41154.1| outer membrane protein assembly complex subunit YfiO [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|330863601|emb|CBX73711.1| UPF0169 lipoprotein yfiO [Yersinia enterocolitica W22703]
          Length = 243

 Score =  268 bits (686), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 56/248 (22%), Positives = 107/248 (43%), Gaps = 17/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +     L G    S++DV  D+        E+Y  A   L++ NF  A  
Sbjct: 1   MTRMKYLVAAATLSLVLTGCS--SNKDVVPDNPP-----SELYATAQQKLQDGNFKGAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y +     A +  + ++   P   N+DYV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVLYMRG 113

Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   +          I     D +  K   +  +++++ Y NS Y   A+  +   +++
Sbjct: 114 LTDMALDDSALQGFFGIDRSDRDPQHAKAAFRDFNQLIQSYPNSQYATDAQKRLMFLKDR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E+ + +YY KRG YVA + R + +L +Y D +   +A+  +  AY  L L  +A +
Sbjct: 174 LAKHELAVAQYYTKRGAYVAVVNRVEQMLRDYPDTQATRDALPLMENAYKQLQLNAQADK 233

Query: 249 VVSLIQER 256
           V  +I   
Sbjct: 234 VAKIIAAN 241


>gi|238752928|ref|ZP_04614390.1| hypothetical protein yrohd0001_38840 [Yersinia rohdei ATCC 43380]
 gi|238708836|gb|EEQ01092.1| hypothetical protein yrohd0001_38840 [Yersinia rohdei ATCC 43380]
          Length = 240

 Score =  268 bits (686), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 58/240 (24%), Positives = 105/240 (43%), Gaps = 15/240 (6%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
             + A   LV     S++DV  D+        E+Y  A   L++ NF  A          
Sbjct: 4   LVAAATLSLVLTGCSSNKDVVPDNPP-----SELYATAQQKLQDGNFKGAITQLEALDNR 58

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM-- 144
           +PF   +++  L   +  Y +     A +  + ++   P   N+DYV Y+ G++   +  
Sbjct: 59  YPFGPYSQQVQLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVLYMRGLTDMALDD 118

Query: 145 --------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
                   I     D +  K   +  +++++ Y NS Y   A+  +   +++LA  E+ +
Sbjct: 119 SALQGFFGIDRSDRDPQHAKAAFRDFNQLIQSYPNSQYATDAQKRLMFLKDRLAKHELAV 178

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            +YY KRG YVA + R + +L +Y D +   +A+  +  AY  L L  EA +V  +I   
Sbjct: 179 AQYYTKRGAYVAVVNRVEQMLRDYPDTQATRDALPLMENAYKQLQLTAEADKVAKIIAAN 238


>gi|163732123|ref|ZP_02139569.1| competence lipoprotein ComL, putative [Roseobacter litoralis Och
           149]
 gi|161394421|gb|EDQ18744.1| competence lipoprotein ComL, putative [Roseobacter litoralis Och
           149]
          Length = 273

 Score =  268 bits (686), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 73/245 (29%), Positives = 122/245 (49%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           +   IA C         +     +   +     +++E+    L       A  YF +  R
Sbjct: 1   MVVGIAGCTSDPGRTTGTFFNPQEVPLEAFEAEQIFERGEFELTRNRPDDAAFYFAEIER 60

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
            +P++  AR++L+M AF  +    Y  + S  + +I  YP+  +  Y  YL+ +SY   I
Sbjct: 61  LYPYSDWARRALIMQAFSYHQDQDYPNSRSAAQRFIDFYPDDDDAAYAQYLLALSYYDQI 120

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
            +V  DQ  T   LQ + + +ERY +S Y + +     +  + LA KE+EIGRYYL+R  
Sbjct: 121 DEVGRDQGLTFQALQALRQTIERYPDSEYARASILKFDLAFDHLAGKEMEIGRYYLRRDH 180

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
           + AAI RF++V+ ++    H  EA+ RLVEAY++L L DEA+   +++   Y    W + 
Sbjct: 181 FAAAINRFRVVVEDFQTTSHTPEALHRLVEAYLSLGLTDEAQTAGAILGYNYQSTIWYQD 240

Query: 266 VETLV 270
              L+
Sbjct: 241 SFALL 245


>gi|238790741|ref|ZP_04634502.1| hypothetical protein yfred0001_15820 [Yersinia frederiksenii ATCC
           33641]
 gi|238721182|gb|EEQ12861.1| hypothetical protein yfred0001_15820 [Yersinia frederiksenii ATCC
           33641]
          Length = 240

 Score =  268 bits (686), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 57/240 (23%), Positives = 105/240 (43%), Gaps = 15/240 (6%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
             + A   LV     S++DV  D+        E+Y  A   L++ NF  A          
Sbjct: 4   LVAAATLSLVLTGCSSNKDVVPDNPP-----SELYATAQQKLQDGNFKGAITQLEALDNR 58

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM-- 144
           +PF   +++  L   +  Y +     A +  + ++   P   N+DYV Y+ G++   +  
Sbjct: 59  YPFGPYSQQVQLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVLYMRGLTDMALDD 118

Query: 145 --------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
                   I     D +  K   +  +++++ Y NS Y   A+  +   +++LA  E+ +
Sbjct: 119 SALQGFFGIDRSDRDPQHAKAAFRDFNQLIQSYPNSQYATDAQKRLIFLKDRLAKHELAV 178

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            +YY KRG YVA + R + +L +Y D +   +A+  +  AY  L L  +A +V  +I   
Sbjct: 179 AQYYTKRGAYVAVVNRVEQMLRDYPDTQATRDALPLMENAYKQLQLNAQADKVAKIIAAN 238


>gi|94501302|ref|ZP_01307823.1| competence lipoprotein ComL, putative [Oceanobacter sp. RED65]
 gi|94426573|gb|EAT11560.1| competence lipoprotein ComL, putative [Oceanobacter sp. RED65]
          Length = 291

 Score =  268 bits (686), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 59/245 (24%), Positives = 110/245 (44%), Gaps = 16/245 (6%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            +   I +  L        R            +R +Y+KA+  +  +NF  A E   +  
Sbjct: 21  FLILLITIASLAACSSSGKR------PDQELSERGIYDKAMEAIGNENFFLAIETLERLE 74

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
             +PF   + ++ L     QY A   + A +  E +I  +P+   VDY YY+  ++  ++
Sbjct: 75  NRYPFGKYSEQAQLEMIHAQYQAQDLENARATAERFIRLHPQHPKVDYAYYMKALTTYEL 134

Query: 145 ----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
                       +   D    +     ++ +++R+ NS Y   AR  +   R+++A  E+
Sbjct: 135 GLSLVERYFADEESQRDPSPAQESFNELAELIKRFPNSEYAADARQRMIYLRDRIALHEI 194

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
            + RYYLKR  YVAA  R + V+ N+   +  ++ +A +VEAY  L   D A + + +++
Sbjct: 195 HVARYYLKRHAYVAAANRGRNVVENFQGTKQVDDGLAMMVEAYTLLGQKDLADKSLKVLK 254

Query: 255 ERYPQ 259
             YP+
Sbjct: 255 ANYPE 259


>gi|319407495|emb|CBI81143.1| competence lipoprotein precursor [Bartonella sp. 1-1C]
          Length = 306

 Score =  268 bits (686), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 82/254 (32%), Positives = 129/254 (50%), Gaps = 2/254 (0%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDS-VTDVRYQREVYEKAVLFLKEQNFSKAY 77
           + K  + +      CFL G   +    +     V  +     +Y +A+  L     S+A 
Sbjct: 28  VRKVLIGVLLG-GTCFLAGCLGKGKNILDPSMHVLKIDPPDVLYNQALANLDVGRLSEAA 86

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           + F    + + +    RKSL+M AF  Y   KY  A ++ + YI+ YP + +  Y YY++
Sbjct: 87  KKFAIIEKQYAYTDWGRKSLIMGAFTNYRLAKYDDAIAMAQHYISLYPLADDSAYAYYII 146

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
           G+S  + I DV  DQ+ TK  +  M  ++ERY  S YV  A+  +  GR QLA KE++IG
Sbjct: 147 GLSSFRRIPDVTRDQQDTKRAIAAMQVLIERYPESEYVSDAKAKIRFGREQLAGKEMQIG 206

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           RYY +   Y+AA  RF+ V+  Y D    EEA+ RL E   AL L  EA+   +++   Y
Sbjct: 207 RYYEEGQRYLAASRRFRTVIEEYPDTNQIEEALFRLTEVNFALGLTMEAQTAAAILGRNY 266

Query: 258 PQGYWARYVETLVK 271
           P+  W ++   L++
Sbjct: 267 PESKWYKFSYDLLQ 280


>gi|114798667|ref|YP_759117.1| putative competence lipoprotein ComL [Hyphomonas neptunium ATCC
           15444]
 gi|114738841|gb|ABI76966.1| putative competence lipoprotein ComL [Hyphomonas neptunium ATCC
           15444]
          Length = 277

 Score =  268 bits (686), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 72/252 (28%), Positives = 131/252 (51%), Gaps = 2/252 (0%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K        +A   L+     + R+  L  V   R   ++Y +    L  +++++A  
Sbjct: 1   MPKLTPLPLVILAGALLITACSSTRRNPELAYVE--RPVEQLYNQGTDRLDRRDYTRAKL 58

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
           +F +  R  P++  AR++++MSA+  Y +  Y  + +  E Y++ +P     +Y YYL+ 
Sbjct: 59  FFEEVERQHPYSEWARRAMVMSAYASYRSRDYTTSITGAERYLSLHPGGSEAEYAYYLIA 118

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           +++   I DV  DQ  T+     +  ++ RY  S Y + AR  + +  +QLA KE+ +GR
Sbjct: 119 LNHFDQITDVGRDQATTESARNALLEVIRRYPESEYARDARVKLDMVNDQLAGKEMTVGR 178

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           +YL+  + +AA+ RF+ V+ +Y    H+EEA+ RLVEAY+ L L D+A    + +   YP
Sbjct: 179 WYLRSNQTLAAVNRFRKVVTDYQTTSHSEEALHRLVEAYLTLGLRDQAVVAGATLGHNYP 238

Query: 259 QGYWARYVETLV 270
              W +    L+
Sbjct: 239 GSDWYQMSYRLL 250


>gi|117621430|ref|YP_858499.1| ComL family lipoprotein [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|117562837|gb|ABK39785.1| lipoprotein, ComL family [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 305

 Score =  268 bits (686), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 57/252 (22%), Positives = 106/252 (42%), Gaps = 17/252 (6%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
            K  L +  ++    + G    S++    D   +      +Y+KA L L   N+  A E 
Sbjct: 57  KKSHLLMSLALVATLITGCS--STKPKVPDEPPET-----LYQKARLKLDAGNYLNAIEL 109

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
                  +PF   + +  L   +  Y      QA +  + +I   P  KN+DYV+Y+ G+
Sbjct: 110 LEALDSRYPFGAYSNQVQLDLIYAYYKQDDTAQAIANIDRFIRLNPAHKNIDYVFYMRGL 169

Query: 140 SY----AQMIRDV------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
           +         +D         D    +   Q    +++ Y NS Y   AR  +   +N+L
Sbjct: 170 TNMAGDYNFFQDFLGINRDDKDPSYARQAFQDFKTLLQNYPNSVYAADARARMIGLKNRL 229

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           A  ++ +  YY+KR   +AA  R +L++  Y D    E+A+  ++ +Y +L +   A+  
Sbjct: 230 ARYDLSVAEYYVKRDALIAAANRAKLIVETYPDTAETEKALEIMINSYDSLKMPTLAQHA 289

Query: 250 VSLIQERYPQGY 261
             ++ + YP   
Sbjct: 290 REVLAKNYPDNR 301


>gi|157148107|ref|YP_001455426.1| outer membrane protein assembly complex subunit YfiO [Citrobacter
           koseri ATCC BAA-895]
 gi|157085312|gb|ABV14990.1| hypothetical protein CKO_03917 [Citrobacter koseri ATCC BAA-895]
          Length = 245

 Score =  268 bits (686), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 99/248 (39%), Gaps = 17/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +    FL G     S++   D+        E+Y  A   L++ N+ +A  
Sbjct: 1   MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWKQAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y       A +  + +I   P   N+DYV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   +                D +  +      S++V  Y NS Y   A   +   +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVRSYPNSQYTTDATKRLVFLKDR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E  +  YY  RG +VA + R + +L ++ D +   +A+  +  AY  + +  +A +
Sbjct: 174 LAKYEYSVADYYTARGAWVAVVNRVEGMLRDFPDTQATRDALPLMENAYRQMQMTTQADK 233

Query: 249 VVSLIQER 256
           V  +I   
Sbjct: 234 VAKIIAAN 241


>gi|288934029|ref|YP_003438088.1| outer membrane assembly lipoprotein YfiO [Klebsiella variicola
           At-22]
 gi|288888758|gb|ADC57076.1| outer membrane assembly lipoprotein YfiO [Klebsiella variicola
           At-22]
          Length = 245

 Score =  268 bits (686), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 50/255 (19%), Positives = 101/255 (39%), Gaps = 20/255 (7%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
             ++         S+A+    G     S++   D+        E+Y  A   L++ N+ +
Sbjct: 1   MTRMKYLVAAATLSLALVGCSG-----SKEEVPDNPP-----NEIYATAQQKLQDGNWKQ 50

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A          +PF   +++  L   +  Y       A +  + ++   P   N+DYV Y
Sbjct: 51  AITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVIY 110

Query: 136 LVGMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           + G++   +                D +  +      S++V  Y NS Y   A   +   
Sbjct: 111 MRGLTNMALDDSALQGFFGVDRSDRDPQHARDAFNDFSKLVRGYPNSQYATDAFKRMVFL 170

Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
           +++LA  E+ +  YY  RG +VA + R + ++ NY D +   +A+ ++  AY  + +  +
Sbjct: 171 KDRLAKYELSVVDYYTDRGAWVAVVNRVEGMMRNYPDTQATRDALPKMENAYRQMQMNAQ 230

Query: 246 AREVVSLIQERYPQG 260
           A +V  +I       
Sbjct: 231 ADKVAKIIAANSKNT 245


>gi|317049250|ref|YP_004116898.1| outer membrane assembly lipoprotein YfiO [Pantoea sp. At-9b]
 gi|316950867|gb|ADU70342.1| outer membrane assembly lipoprotein YfiO [Pantoea sp. At-9b]
          Length = 243

 Score =  268 bits (685), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 57/252 (22%), Positives = 103/252 (40%), Gaps = 20/252 (7%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
             ++         S+A+    G     S+D   DS        E+Y  A   L++ NF  
Sbjct: 1   MTRMKHLVAAATLSLALVGCSG-----SKDTVPDSPP-----SEIYATAQQKLQDGNFKA 50

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A +        +PF   +++  L   +  Y       A +    ++   P   N+DYV Y
Sbjct: 51  AIKQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIARFMRLNPTHPNIDYVIY 110

Query: 136 LVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           + G++   +          I     D    +   +  S+++  Y NS Y   A+  +   
Sbjct: 111 MKGLTDMALDDSALQGFFGIDRSDRDPTHARDAFRDFSQLLRGYPNSQYAADAQKRLVFL 170

Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
           + +LA  E+ + ++Y KRG YVA + R + ++ +Y D +   EA+  +  AY  L L  E
Sbjct: 171 KERLAKYELSVAQFYTKRGAYVAVVNRVEGMMKDYPDTQATHEALPLMENAYRQLQLTAE 230

Query: 246 AREVVSLIQERY 257
           A +V  +I   +
Sbjct: 231 ADKVAKIIAANH 242


>gi|209545278|ref|YP_002277507.1| outer membrane assembly lipoprotein YfiO [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209532955|gb|ACI52892.1| outer membrane assembly lipoprotein YfiO [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 319

 Score =  268 bits (685), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 66/249 (26%), Positives = 123/249 (49%), Gaps = 7/249 (2%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           +L +  S+A C          +    D  + V     +Y   +  L++Q ++ A   F  
Sbjct: 24  SLALILSVAACG-------GDKKAINDMESHVPPVETLYNNGIDALRDQRYALAAAEFEV 76

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
             +++P++G    + LM  +  Y   KY  A    + ++  +P S +  Y +YL  + Y 
Sbjct: 77  LQQNYPYSGYVANAQLMEGYANYLQDKYADAVQQLDRFLELHPTSADAAYAFYLRALCYY 136

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
           + + +V  DQ+ T   +  +  ++ R+  SPY + A+  V + R+ LA KE+ +GR+Y +
Sbjct: 137 EQVAEVQRDQQGTVEAMNALEEVITRFPQSPYARDAQLKVDLCRDHLAGKEMLVGRFYEE 196

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           +  Y  A+ R+Q V+ ++    H  EA+ RLVE Y+ L L D+AR   S++   YP   W
Sbjct: 197 QRNYEGAVNRYQRVVQDFQTTNHVPEALERLVEVYLDLGLTDQARRTASVLSYNYPGSKW 256

Query: 263 ARYVETLVK 271
            R+   +++
Sbjct: 257 YRFSYNMLR 265


>gi|239787476|emb|CAX83947.1| DNA uptake lipoprotein-like protein precursor [uncultured
           bacterium]
          Length = 289

 Score =  268 bits (685), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 66/248 (26%), Positives = 122/248 (49%), Gaps = 9/248 (3%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           I  +  +  L G       +V L           +Y + V  +++  F  A + F +  R
Sbjct: 9   IAVAGLMILLAGCSSTPEEEVTLP-------PEVLYRQGVQAIQKNRFPVAVKRFQEVDR 61

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
             PF+  A ++ L   +  Y   +Y++A S  E ++  +P   +V Y YY++ +++ + I
Sbjct: 62  KHPFSPWAVRAQLNLIYAHYMDEEYEEALSAAERFVRLHPRHPHVAYPYYMLALAHYKRI 121

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
            D   DQ  TK        ++ R+ +S Y + AR  + + R++LAA+EV +GR+YL R +
Sbjct: 122 ADPLRDQGHTKQAEVAFRELIARFPDSDYAEEARRMLELCRDRLAAQEVVVGRFYLDRDQ 181

Query: 206 YVAAIPRFQLVLAN--YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
           Y+AA  RF+ V+ N  ++   + EEA+  LV + + L L  EA    +++   Y  G + 
Sbjct: 182 YIAATNRFRRVVENQDFNRTPYVEEALFGLVMSSLKLGLPQEALTYAAVLGHNYADGPFY 241

Query: 264 RYVETLVK 271
            +   +V+
Sbjct: 242 PHARAMVE 249


>gi|302185254|ref|ZP_07261927.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
           syringae 642]
          Length = 340

 Score =  268 bits (685), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 14/229 (6%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
            SS++V  +++++V    E+Y++A   L   +++ A E        +PF   A ++ L  
Sbjct: 18  CSSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLEL 73

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPY 150
            +  Y  G+ + A S  E +I  +P+  NVDY YY+ G++                    
Sbjct: 74  IYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKR 133

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
           D  A +      +++  R+ NS Y   A+  +   RN LA+ E+ +  YYL R  YVAA 
Sbjct: 134 DPGAARDSFNEFAQLTSRFPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAA 193

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            R + V+ N+ +     + +A +VE+Y  L L D A   + +++  YP 
Sbjct: 194 NRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242


>gi|300703939|ref|YP_003745541.1| lipoprotein [Ralstonia solanacearum CFBP2957]
 gi|299071602|emb|CBJ42926.1| putative lipoprotein, ComL family, tetratricopeptide repeats (TPR)
           domain [Ralstonia solanacearum CFBP2957]
          Length = 277

 Score =  268 bits (685), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 59/255 (23%), Positives = 109/255 (42%), Gaps = 14/255 (5%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           +    +   +A   +        +       T      ++Y +A   L   ++SKA +Y+
Sbjct: 14  RIGAVMAAGVACLAISACGIMPEQQDE----TAGWSANKLYSEAKDALDGGDYSKAVKYY 69

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
            +    +PF   A+++ + +A+  Y  G+   A +  + +I  +P   +VDY YYL G+ 
Sbjct: 70  EKLESRYPFGPFAQQAQIETAYANYKDGETAAALAAVDRFIQLHPNHPSVDYAYYLKGLI 129

Query: 141 YAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
                               D +A +        ++ R+ NS Y   A   +    N +A
Sbjct: 130 NFNDNLGWLGRFSNQDLSERDPKAARAAYDAFKTLITRFPNSKYTPDAAQRMQYIVNAMA 189

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
             EV+  RYY +RG Y+AA  R Q  + +Y  A   EEA+  ++++Y AL + D   +  
Sbjct: 190 EHEVQAARYYYRRGAYLAATNRAQEAIKDYDRAPAVEEALYIMMKSYEALGMKDLRDDTE 249

Query: 251 SLIQERYPQGYWARY 265
            +I++ YP   +  Y
Sbjct: 250 RIIKQNYPNSNFILY 264


>gi|85374273|ref|YP_458335.1| DNA uptake lipoprotein [Erythrobacter litoralis HTCC2594]
 gi|84787356|gb|ABC63538.1| DNA uptake lipoprotein [Erythrobacter litoralis HTCC2594]
          Length = 266

 Score =  268 bits (685), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 70/222 (31%), Positives = 117/222 (52%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D+    R    +Y  A   L   N   A   F++  R  P++  AR++ LMSAF  Y + 
Sbjct: 35  DTAYVARDVETLYASAKDRLDRGNAKLAAALFDEVERQHPYSPWARRAQLMSAFSYYVSR 94

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
            Y +A    + +++ +P +K+  Y YYL+ +SY + I DV  DQ+ T+  L  +  +  R
Sbjct: 95  DYTKAIQSAQRFLSIHPGNKDAPYAYYLIALSYYEQISDVQRDQKVTEQALTALREVDRR 154

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           +  + Y   AR  + +  + LA KE+EIGR+Y +  ++ AA+ RFQ V+ +Y    HA E
Sbjct: 155 FPQTEYAADARLKMDLVNDHLAGKEMEIGRFYQRTAKWAAAVIRFQNVVDDYQTTSHAPE 214

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
           A+ RL E+ +AL +  EA++  +++   YP   W      L+
Sbjct: 215 ALYRLTESNLALGIPTEAKKYAAVLGANYPGSEWYEKAYELI 256


>gi|308187866|ref|YP_003931997.1| UPF0169 lipoprotein yfiO precursor [Pantoea vagans C9-1]
 gi|308058376|gb|ADO10548.1| putative UPF0169 lipoprotein yfiO precursor [Pantoea vagans C9-1]
          Length = 274

 Score =  268 bits (685), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 55/251 (21%), Positives = 101/251 (40%), Gaps = 20/251 (7%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
             ++         S+A+    G     S D   DS        E+Y  A   L++ NF  
Sbjct: 32  MTRMKHLVAAATLSLALVGCSG-----SNDAVPDSPP-----SEIYATAQQKLQDGNFKA 81

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A +        +PF   +++  L   +  Y       A +    ++   P   N+DYV Y
Sbjct: 82  AIKQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIARFMRLNPTHPNIDYVIY 141

Query: 136 LVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           + G++   +          I     D    +   +  S+++  Y NS Y   A+  +   
Sbjct: 142 MKGLTDMALDDSALQGFFGIDRSDRDPTHARDAFRDFSQLLRSYPNSQYAADAQKRLVYL 201

Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
           +++LA  E+ + ++Y KR  YVA + R + ++ +Y D +   +A+  +  AY  L L  E
Sbjct: 202 KDRLAKYELSVAQFYTKREAYVAVVNRVEGMMRDYPDTQATHDALPLMENAYRNLQLNAE 261

Query: 246 AREVVSLIQER 256
           A +V  +I   
Sbjct: 262 ADKVAKIIAAN 272


>gi|207743016|ref|YP_002259408.1| dna uptake lipoprotein [Ralstonia solanacearum IPO1609]
 gi|206594413|emb|CAQ61340.1| dna uptake lipoprotein [Ralstonia solanacearum IPO1609]
          Length = 277

 Score =  267 bits (684), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 59/255 (23%), Positives = 109/255 (42%), Gaps = 14/255 (5%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           +    +   +A   +        +       T      ++Y +A   L   ++SKA +Y+
Sbjct: 14  RIGAVMAAGVACLAISACGIMPEQQDE----TAGWSANKLYSEAKDALDGGDYSKAVKYY 69

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
            +    +PF   A+++ + +A+  Y  G+   A +  + +I  +P   +VDY YYL G+ 
Sbjct: 70  EKLESRYPFGPFAQQAQIETAYANYKDGETAAALAAVDRFIQLHPNHPSVDYAYYLKGLI 129

Query: 141 YAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
                               D +A +        ++ R+ NS Y   A   +    N +A
Sbjct: 130 NFNDNLGWLGRFSNQDLSERDPKAARAAYDAFKTLITRFPNSKYTPDAAQRMQYIVNAMA 189

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
             EV+  RYY +RG Y+AA  R Q  + +Y  A   EEA+  ++++Y AL + D   +  
Sbjct: 190 EHEVQAARYYYRRGAYLAATNRAQEAIKDYDRAPAVEEALYIMMKSYEALGMKDLRDDTE 249

Query: 251 SLIQERYPQGYWARY 265
            +I++ YP   +  Y
Sbjct: 250 RIIKQNYPNSNFMLY 264


>gi|293411986|ref|ZP_06654709.1| conserved hypothetical protein [Escherichia coli B354]
 gi|331664162|ref|ZP_08365071.1| putative lipoprotein [Escherichia coli TA143]
 gi|291468757|gb|EFF11248.1| conserved hypothetical protein [Escherichia coli B354]
 gi|331058619|gb|EGI30597.1| putative lipoprotein [Escherichia coli TA143]
          Length = 245

 Score =  267 bits (684), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 101/248 (40%), Gaps = 17/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +    FL G     S++   D+        E+Y  A   L++ N+ +A  
Sbjct: 1   MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWRQAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y       A +  + +I   P   N+DYV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   +                D +  +      S++V  Y NS Y   A   +   +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E  + +YY +RG +VA + R + +L +Y D +   +A+  +  AY  + +  +A +
Sbjct: 174 LAKYEYSVAKYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEK 233

Query: 249 VVSLIQER 256
           V  +I   
Sbjct: 234 VAKIIAAN 241


>gi|238756472|ref|ZP_04617779.1| hypothetical protein yruck0001_32310 [Yersinia ruckeri ATCC 29473]
 gi|238705321|gb|EEP97731.1| hypothetical protein yruck0001_32310 [Yersinia ruckeri ATCC 29473]
          Length = 243

 Score =  267 bits (684), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 54/248 (21%), Positives = 105/248 (42%), Gaps = 17/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +     L G    S++DV  D+        E+Y  A   L++ NF  A  
Sbjct: 1   MTRMKYLVAAATLSLVLTGCS--SNKDVVPDNPP-----SELYATAQQKLQDGNFKGAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y +     A +  + ++   P   N+DYV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVLYMRG 113

Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   +          I     D +  K   +  +++++ + NS Y   A+  +   +N+
Sbjct: 114 LTDMALDDSALQGFFGIDRSDRDPQHAKAAFRDFNQLIQSHPNSQYATDAQKRLVYLKNR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E+ +  YY KRG YVA I R + ++ +Y   +   +A+  +  AY  + L  +A +
Sbjct: 174 LAKHELAVAEYYTKRGAYVAVINRVEQMMRDYPGTQATRDALPLMENAYKQIQLNAQADK 233

Query: 249 VVSLIQER 256
           V  +I   
Sbjct: 234 VNKVIAAN 241


>gi|194435121|ref|ZP_03067357.1| outer membrane assembly lipoprotein YfiO [Shigella dysenteriae
           1012]
 gi|194416652|gb|EDX32785.1| outer membrane assembly lipoprotein YfiO [Shigella dysenteriae
           1012]
 gi|332089242|gb|EGI94349.1| outer membrane assembly lipoprotein YfiO [Shigella dysenteriae
           155-74]
          Length = 245

 Score =  267 bits (684), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 52/248 (20%), Positives = 101/248 (40%), Gaps = 17/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +    FL G     S++   D+        E+Y  A   L++ N+ +A  
Sbjct: 1   MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWRQAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y       A +  + +I   P   N+DYV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   +                D +  ++     S++V  Y NS Y   A   +   +N+
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARVAFSDFSKLVRGYPNSQYTTDATKRLVFLKNR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E  +  YY +RG +VA + R + +L +Y D +   +A+  +  AY  + +  +A +
Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQINAQAEK 233

Query: 249 VVSLIQER 256
           V  +I   
Sbjct: 234 VAKIIAAN 241


>gi|59800727|ref|YP_207439.1| ComL [Neisseria gonorrhoeae FA 1090]
 gi|194097999|ref|YP_002001047.1| ComL, competence lipoprotein [Neisseria gonorrhoeae NCCP11945]
 gi|239998465|ref|ZP_04718389.1| ComL, competence lipoprotein [Neisseria gonorrhoeae 35/02]
 gi|240013590|ref|ZP_04720503.1| ComL, competence lipoprotein [Neisseria gonorrhoeae DGI18]
 gi|240016029|ref|ZP_04722569.1| ComL, competence lipoprotein [Neisseria gonorrhoeae FA6140]
 gi|240080170|ref|ZP_04724713.1| ComL, competence lipoprotein [Neisseria gonorrhoeae FA19]
 gi|240112384|ref|ZP_04726874.1| ComL, competence lipoprotein [Neisseria gonorrhoeae MS11]
 gi|240115124|ref|ZP_04729186.1| ComL, competence lipoprotein [Neisseria gonorrhoeae PID18]
 gi|240117407|ref|ZP_04731469.1| ComL, competence lipoprotein [Neisseria gonorrhoeae PID1]
 gi|240120660|ref|ZP_04733622.1| ComL, competence lipoprotein [Neisseria gonorrhoeae PID24-1]
 gi|240122964|ref|ZP_04735920.1| ComL, competence lipoprotein [Neisseria gonorrhoeae PID332]
 gi|240125215|ref|ZP_04738101.1| ComL, competence lipoprotein [Neisseria gonorrhoeae SK-92-679]
 gi|240127669|ref|ZP_04740330.1| ComL, competence lipoprotein [Neisseria gonorrhoeae SK-93-1035]
 gi|254493185|ref|ZP_05106356.1| competence lipoprotein comL [Neisseria gonorrhoeae 1291]
 gi|260441059|ref|ZP_05794875.1| ComL, competence lipoprotein [Neisseria gonorrhoeae DGI2]
 gi|268594326|ref|ZP_06128493.1| peptidoglycan-linked lipoprotein [Neisseria gonorrhoeae 35/02]
 gi|268596321|ref|ZP_06130488.1| peptidoglycan-linked lipoprotein [Neisseria gonorrhoeae FA19]
 gi|268598445|ref|ZP_06132612.1| competence lipoprotein comL [Neisseria gonorrhoeae MS11]
 gi|268600799|ref|ZP_06134966.1| competence lipoprotein comL [Neisseria gonorrhoeae PID18]
 gi|268603104|ref|ZP_06137271.1| competence lipoprotein comL [Neisseria gonorrhoeae PID1]
 gi|268681585|ref|ZP_06148447.1| competence lipoprotein comL [Neisseria gonorrhoeae PID332]
 gi|268683813|ref|ZP_06150675.1| competence lipoprotein comL [Neisseria gonorrhoeae SK-92-679]
 gi|268686055|ref|ZP_06152917.1| competence lipoprotein comL [Neisseria gonorrhoeae SK-93-1035]
 gi|291044391|ref|ZP_06570100.1| peptidoglycan-linked lipoprotein [Neisseria gonorrhoeae DGI2]
 gi|293399572|ref|ZP_06643725.1| lipoprotein [Neisseria gonorrhoeae F62]
 gi|5921830|sp|Q50985|COML_NEIGO RecName: Full=Competence lipoprotein ComL; Flags: Precursor
 gi|1107833|emb|CAA90076.1| ComL, competence lipoprotein [Neisseria gonorrhoeae]
 gi|59717622|gb|AAW89027.1| competence lipoprotein [Neisseria gonorrhoeae FA 1090]
 gi|193933289|gb|ACF29113.1| ComL, competence lipoprotein [Neisseria gonorrhoeae NCCP11945]
 gi|226512225|gb|EEH61570.1| competence lipoprotein comL [Neisseria gonorrhoeae 1291]
 gi|268547715|gb|EEZ43133.1| peptidoglycan-linked lipoprotein [Neisseria gonorrhoeae 35/02]
 gi|268550109|gb|EEZ45128.1| peptidoglycan-linked lipoprotein [Neisseria gonorrhoeae FA19]
 gi|268582576|gb|EEZ47252.1| competence lipoprotein comL [Neisseria gonorrhoeae MS11]
 gi|268584930|gb|EEZ49606.1| competence lipoprotein comL [Neisseria gonorrhoeae PID18]
 gi|268587235|gb|EEZ51911.1| competence lipoprotein comL [Neisseria gonorrhoeae PID1]
 gi|268621869|gb|EEZ54269.1| competence lipoprotein comL [Neisseria gonorrhoeae PID332]
 gi|268624097|gb|EEZ56497.1| competence lipoprotein comL [Neisseria gonorrhoeae SK-92-679]
 gi|268626339|gb|EEZ58739.1| competence lipoprotein comL [Neisseria gonorrhoeae SK-93-1035]
 gi|291011285|gb|EFE03281.1| peptidoglycan-linked lipoprotein [Neisseria gonorrhoeae DGI2]
 gi|291610141|gb|EFF39263.1| lipoprotein [Neisseria gonorrhoeae F62]
 gi|317163747|gb|ADV07288.1| ComL [Neisseria gonorrhoeae TCDC-NG08107]
 gi|1588996|prf||2209423A lipoprotein
          Length = 267

 Score =  267 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 61/259 (23%), Positives = 115/259 (44%), Gaps = 14/259 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K  LT+   +A   L     Q + D     +T      ++Y +A   L   N+++A +
Sbjct: 1   MKKILLTVSLGLA---LSACATQGTADKDA-QITQDWSVEKLYAEAQDELNSSNYTRAVK 56

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            +      FP +  AR+S L +A+  Y   +  +A +  E +   +P+  N+DY  YL G
Sbjct: 57  LYEILESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIERFRRLHPQHPNMDYALYLRG 116

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +      +              D +A +   Q  + +V+R+ NS Y   A   +    + 
Sbjct: 117 LVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNSKYAADATARMVKLVDA 176

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           L   E+ + RYY+KRG Y+AA  R + ++ +Y +  + EE++A L  AY  L     A +
Sbjct: 177 LGGNEMSVARYYMKRGAYIAAANRAKKIIGSYQNTRYVEESLAILELAYKKLDKPQLAAD 236

Query: 249 VVSLIQERYPQGYWARYVE 267
              +++  +P+  +  +  
Sbjct: 237 TRRVLETNFPKSPFLTHAW 255


>gi|261342025|ref|ZP_05969883.1| competence lipoprotein ComL [Enterobacter cancerogenus ATCC 35316]
 gi|288315681|gb|EFC54619.1| competence lipoprotein ComL [Enterobacter cancerogenus ATCC 35316]
          Length = 245

 Score =  267 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 49/251 (19%), Positives = 99/251 (39%), Gaps = 20/251 (7%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
             ++         S+A+    G     S +   D+        E+Y  A   L++ N+ +
Sbjct: 1   MTRMKYLVAAATLSLALVGCSG-----SNEQVPDNPP-----NEIYATAQQKLQDGNWKQ 50

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A          +PF   +++  L   +  Y       A +  + ++   P   N+DYV Y
Sbjct: 51  AITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQATIDRFMRLNPTHPNIDYVMY 110

Query: 136 LVGMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           + G++   +                D +  +      S++V  Y NS Y+  A   +   
Sbjct: 111 MRGLTNMALDDSALQGFFGVDRSDRDPQHARDAFNDFSKLVRGYPNSQYITDATKRLVFL 170

Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
           +++LA  E  +  YY +RG +VA + R + +L +Y D +   + +  +  AY  + +  +
Sbjct: 171 KDRLAKYEYSVAEYYTRRGAWVAVVNRVEGMLRDYPDTQATRDGLKLMENAYRQMQMTGQ 230

Query: 246 AREVVSLIQER 256
           A +V  +I   
Sbjct: 231 AEKVAKIIAAN 241


>gi|82778019|ref|YP_404368.1| outer membrane protein assembly complex subunit YfiO [Shigella
           dysenteriae Sd197]
 gi|309789451|ref|ZP_07684037.1| conserved hypothetical protein [Shigella dysenteriae 1617]
 gi|81242167|gb|ABB62877.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
 gi|308922694|gb|EFP68215.1| conserved hypothetical protein [Shigella dysenteriae 1617]
          Length = 245

 Score =  267 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 52/248 (20%), Positives = 100/248 (40%), Gaps = 17/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +    FL G     S++   D+        E+Y  A   L++ N+ +A  
Sbjct: 1   MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWRQAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y       A +  + +I   P   N+DYV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   +                D +  +      S++V  Y NS Y   A   +   +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E  +  YY +RG +VA + R + +L NY D +   +A+  +  AY  + +  +A +
Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRNYPDTQATRDALPLMENAYRQMQMNAQAEK 233

Query: 249 VVSLIQER 256
           V  +I   
Sbjct: 234 VAKIIAAN 241


>gi|114327085|ref|YP_744242.1| ComL family lipoprotein [Granulibacter bethesdensis CGDNIH1]
 gi|114315259|gb|ABI61319.1| lipoprotein, ComL family [Granulibacter bethesdensis CGDNIH1]
          Length = 317

 Score =  267 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 73/262 (27%), Positives = 126/262 (48%)

Query: 7   RAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVL 66
           +++ +    ++   K A  I  ++ +  L      S  D             E+Y   V 
Sbjct: 24  QSVSMVLLSSFARAKAARRIGAALLLPLLASGCGSSKDDELAKLDPAKMSVEELYNTGVD 83

Query: 67  FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
            +++  ++ A + F+   + +P++  A  + LM  + QY   KY  A    + +I  +P 
Sbjct: 84  AMQDHRYTTAAQQFDAVQQYYPYSSWAANAQLMQGYSQYLEHKYMDAIGSLDRFIQLHPT 143

Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
            K++ Y YYL  +S+ + I D+  DQ+ T+  +  +  +V R+ +S Y + AR  + + R
Sbjct: 144 HKDIAYAYYLRALSFYEQIADIQRDQKGTEDAMTALQEVVSRFPDSGYARDARLKIDLCR 203

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
           + LA KE+EIGRYY +   Y AAI RFQ V+  Y    H  EA+ RL E Y+ L L  +A
Sbjct: 204 DHLAGKEMEIGRYYEREHLYAAAINRFQTVVKEYQTTNHVPEALHRLTELYLLLGLRSDA 263

Query: 247 REVVSLIQERYPQGYWARYVET 268
           R   +++   YP   W +    
Sbjct: 264 RRTAAVLGHNYPGSSWYQSSWD 285


>gi|82545048|ref|YP_408995.1| outer membrane protein assembly complex subunit YfiO [Shigella
           boydii Sb227]
 gi|81246459|gb|ABB67167.1| conserved hypothetical protein [Shigella boydii Sb227]
 gi|332092137|gb|EGI97215.1| outer membrane assembly lipoprotein YfiO [Shigella boydii 3594-74]
          Length = 245

 Score =  267 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 100/248 (40%), Gaps = 17/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +    FL G     S++   D+        E+Y  A   L++ N+ +A  
Sbjct: 1   MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWRQAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y       A +  + +I   P   N+DYV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   +                D +  +      S++V  Y NS Y   A   +   +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E  +  YY +RG +VA + R + +L +Y D +   +A+  +  +Y  + +  +A +
Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENSYRQMQMNAQAEK 233

Query: 249 VVSLIQER 256
           V  +I   
Sbjct: 234 VAKIIAAN 241


>gi|296104264|ref|YP_003614410.1| putative lipoprotein [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295058723|gb|ADF63461.1| putative lipoprotein [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 245

 Score =  267 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 50/251 (19%), Positives = 99/251 (39%), Gaps = 20/251 (7%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
             ++         S+A+    G     S +   D+        E+Y  A   L++ N+ +
Sbjct: 1   MTRMKYLVAAATLSLALVGCSG-----SNEQVPDNPP-----NEIYATAQQKLQDGNWKQ 50

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A          +PF   +++  L   +  Y       A +  + ++   P   N+DYV Y
Sbjct: 51  AITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQATIDRFMRLNPTHPNIDYVMY 110

Query: 136 LVGMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           + G++   +                D +  +      S++V  Y NS YV  A   +   
Sbjct: 111 MRGLTNMALDDSALQGFFGVDRSDRDPQHARDAFNDFSKLVRGYPNSQYVTDATKRLVFL 170

Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
           +++LA  E  +  YY +RG +VA + R + +L +Y D +   + +  +  AY  + +  +
Sbjct: 171 KDRLAKYEYSVAEYYTRRGAWVAVVNRVEGMLRDYPDTQATRDGLKLMENAYRQMQMTAQ 230

Query: 246 AREVVSLIQER 256
           A +V  +I   
Sbjct: 231 ADKVAKIIAAN 241


>gi|238785832|ref|ZP_04629801.1| hypothetical protein yberc0001_12680 [Yersinia bercovieri ATCC
           43970]
 gi|238798953|ref|ZP_04642416.1| hypothetical protein ymoll0001_9580 [Yersinia mollaretii ATCC
           43969]
 gi|238713245|gb|EEQ05288.1| hypothetical protein yberc0001_12680 [Yersinia bercovieri ATCC
           43970]
 gi|238717182|gb|EEQ09035.1| hypothetical protein ymoll0001_9580 [Yersinia mollaretii ATCC
           43969]
          Length = 240

 Score =  267 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 58/240 (24%), Positives = 105/240 (43%), Gaps = 15/240 (6%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
             + A   LV     S++DV  D+        E+Y  A   L++ NF  A          
Sbjct: 4   LVAAATLSLVLTGCSSNKDVVPDNPP-----SELYATAQQKLQDGNFKGAITQLEALDNR 58

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM-- 144
           +PF   +++  L   +  Y +     A +  + ++   P   N+DYV Y+ G++   +  
Sbjct: 59  YPFGPYSQQVQLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVLYMRGLTDMALDD 118

Query: 145 --------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
                   I     D +  K   +  S++++ Y NS Y   A+  +   +++LA  E+ +
Sbjct: 119 SALQGFFGIDRSDRDPQHAKAAFRDFSQLIQSYPNSQYATDAQKRLMFLKDRLAKHELAV 178

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            +YY KRG YVA + R + +L +Y D +   +A+  +  AY  L L  +A +V  +I   
Sbjct: 179 AQYYTKRGAYVAVVNRVEQMLRDYPDTKATRDALPLMENAYKQLQLNAQADKVAKIIAAN 238


>gi|237801869|ref|ZP_04590330.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331024727|gb|EGI04783.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 340

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 14/229 (6%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
            SS++V  +++++V    E+Y++A   L   +++ A E        +PF   A ++ L  
Sbjct: 18  CSSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLEL 73

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPY 150
            +  Y  G+ + A S  E +I  +P+  NVDY YY+ G++                    
Sbjct: 74  IYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKR 133

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
           D  A +      +++  R+ NS Y   A+  +   RN LA+ E+ +  YYL R  YVAA 
Sbjct: 134 DPGAARDSFNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAA 193

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            R + V+ N+ +     + +A +VE+Y  L L D A   + +++  YP 
Sbjct: 194 NRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242


>gi|307824792|ref|ZP_07655015.1| outer membrane assembly lipoprotein YfiO [Methylobacter
           tundripaludum SV96]
 gi|307734150|gb|EFO05004.1| outer membrane assembly lipoprotein YfiO [Methylobacter
           tundripaludum SV96]
          Length = 279

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 60/253 (23%), Positives = 99/253 (39%), Gaps = 10/253 (3%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           L KF       +++      +   S D   +         +   +A   L   N+ KA +
Sbjct: 5   LIKFLFICCLGLSLQGCETLKSLGSGDSDTEDEYADWNAEKFRGQAKTALDAGNYDKAIK 64

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            +      +PF   + ++ L  A+  Y     + A +  + +I   P S +VDY YYL G
Sbjct: 65  LYEALESRYPFGDESAQTQLDIAYAYYKNSDPEAAIAAADRFIKINPRSSSVDYAYYLKG 124

Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +                     D    +      + +  R+ NS Y+  A+  +   +N 
Sbjct: 125 LVNYNRGIGFIDRFLPTDTSQRDPGTARDAYDNFAELTRRFPNSKYIADAQQRMIELKNN 184

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  EV + R+Y+KR  YVAAI R   V+  Y        A+  + EAY  L L D A++
Sbjct: 185 LAMYEVHVARFYMKRKAYVAAINRASTVVDKYQRTPAVPYALQIMQEAYTKLELPDLAKD 244

Query: 249 VVSLIQERYPQGY 261
              + +  YP G 
Sbjct: 245 TTRVYELNYPNGP 257


>gi|331684251|ref|ZP_08384843.1| putative lipoprotein [Escherichia coli H299]
 gi|331077866|gb|EGI49072.1| putative lipoprotein [Escherichia coli H299]
          Length = 245

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 52/248 (20%), Positives = 100/248 (40%), Gaps = 17/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +    FL G     S++   D+        E+Y  A   L++ N+ +A  
Sbjct: 1   MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWRQAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y       A +  + +I   P   N+DYV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   +                D +  +      S++V  Y NS Y   A   +   +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E  +  YY +RG +VA + R + +L +Y D +   +A+  +  AY  + L  +A +
Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQLNAQAEK 233

Query: 249 VVSLIQER 256
           V  +I   
Sbjct: 234 VAKIIAAN 241


>gi|152971445|ref|YP_001336554.1| outer membrane protein assembly complex subunit YfiO [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|206576804|ref|YP_002237067.1| outer membrane assembly lipoprotein YfiO [Klebsiella pneumoniae
           342]
 gi|238896041|ref|YP_002920777.1| outer membrane protein assembly complex subunit YfiO [Klebsiella
           pneumoniae NTUH-K2044]
 gi|262043839|ref|ZP_06016929.1| competence lipoprotein ComL [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|290510911|ref|ZP_06550280.1| lipoprotein [Klebsiella sp. 1_1_55]
 gi|330012969|ref|ZP_08307539.1| outer membrane assembly lipoprotein YfiO [Klebsiella sp. MS 92-3]
 gi|150956294|gb|ABR78324.1| putative lipoprotein [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|206565862|gb|ACI07638.1| outer membrane assembly lipoprotein YfiO [Klebsiella pneumoniae
           342]
 gi|238548359|dbj|BAH64710.1| putative lipoprotein [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
 gi|259038809|gb|EEW39990.1| competence lipoprotein ComL [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|289775904|gb|EFD83903.1| lipoprotein [Klebsiella sp. 1_1_55]
 gi|328533635|gb|EGF60347.1| outer membrane assembly lipoprotein YfiO [Klebsiella sp. MS 92-3]
          Length = 245

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 50/255 (19%), Positives = 101/255 (39%), Gaps = 20/255 (7%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
             ++         S+A+    G     S++   D+        E+Y  A   L++ N+ +
Sbjct: 1   MTRMKYLVAAATLSLALVGCSG-----SKEEVPDNPP-----NEIYATAQQKLQDGNWKQ 50

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A          +PF   +++  L   +  Y       A +  + ++   P   N+DYV Y
Sbjct: 51  AITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVIY 110

Query: 136 LVGMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           + G++   +                D +  +      S++V  Y NS Y   A   +   
Sbjct: 111 MRGLTNMALDDSALQGFFGVDRSDRDPQHARDAFNDFSKLVRGYPNSQYATDAYKRMVFL 170

Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
           +++LA  E+ +  YY  RG +VA + R + ++ NY D +   +A+ ++  AY  + +  +
Sbjct: 171 KDRLAKYELSVVDYYTDRGAWVAVVNRVEGMMRNYPDTQATRDALPKMENAYRQMQMNAQ 230

Query: 246 AREVVSLIQERYPQG 260
           A +V  +I       
Sbjct: 231 ADKVAKIIAANSKNT 245


>gi|170765615|ref|ZP_02900426.1| outer membrane assembly lipoprotein YfiO [Escherichia albertii
           TW07627]
 gi|170124761|gb|EDS93692.1| outer membrane assembly lipoprotein YfiO [Escherichia albertii
           TW07627]
          Length = 245

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 100/248 (40%), Gaps = 17/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +    FL G     S++   D+        E+Y  A   L++ N+ +A  
Sbjct: 1   MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWRQAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y       A +  + +I   P   N+DYV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   +                D +  +      S++V  Y NS Y   A   +   +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVRGYPNSQYTTDATKRLVFLKDR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E  +  YY +RG +VA + R + +L +Y D +   +A+  +  AY  + +  +A +
Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEK 233

Query: 249 VVSLIQER 256
           V  +I   
Sbjct: 234 VAKIIAAN 241


>gi|323159116|gb|EFZ45109.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E128010]
          Length = 245

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 100/248 (40%), Gaps = 17/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +    FL G     S++   D+        E+Y  A   L++ N+ +A  
Sbjct: 1   MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWRQAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y       A +  + +I   P   N+DYV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   +                D +  +      S++V  Y NS Y   A   +   +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E  +  YY +RG +VA + R + +L +Y D +   +A+  +  AY  + +  +A +
Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGILRDYPDTQATRDALPLMENAYRQMQMNAQAEK 233

Query: 249 VVSLIQER 256
           V  +I   
Sbjct: 234 VAKIIAAN 241


>gi|114561851|ref|YP_749364.1| putative lipoprotein [Shewanella frigidimarina NCIMB 400]
 gi|114333144|gb|ABI70526.1| putative lipoprotein [Shewanella frigidimarina NCIMB 400]
          Length = 253

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 53/253 (20%), Positives = 96/253 (37%), Gaps = 14/253 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +YK A      +    +         D     V        +Y +A   ++  N+SKA  
Sbjct: 1   MYKIAKGAALVLLSLAITACSSSPEDD----DVASKASPDVLYSQARTSMELGNYSKAVR 56

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   FPF     +  L   F  Y         +  + ++   P   N+DYVYY+ G
Sbjct: 57  SLEALDSRFPFGPHKTQVQLDLIFAYYKMDDAASGLANIDRFLRLNPTHPNIDYVYYMRG 116

Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++  Q           I     D +  +   +   R+++ Y NS Y   A+  +   +N+
Sbjct: 117 LTNMQADNYLFHDLMNIDRTDRDPKNAQDAFKDFDRLIKSYPNSKYSADAQQRMQFLKNR 176

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA   +++  YY+K   + AA  R Q V+  +      E A+  +V+AY  L      + 
Sbjct: 177 LAKYSIQVAEYYIKMNAWSAAAVRAQSVMEKFPGTPSTERALEIMVKAYGELGQEKLQQN 236

Query: 249 VVSLIQERYPQGY 261
           V ++++  +P   
Sbjct: 237 VKTVMKANFPTNE 249


>gi|330962680|gb|EGH62940.1| competence lipoprotein ComL [Pseudomonas syringae pv. maculicola
           str. ES4326]
          Length = 340

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 14/229 (6%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
            SS++V  +++++V    E+Y++A   L   +++ A E        +PF   A ++ L  
Sbjct: 18  CSSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLEL 73

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPY 150
            +  Y  G+ + A S  E +I  +P+  NVDY YY+ G++                    
Sbjct: 74  IYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKR 133

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
           D  A +      +++  RY NS Y   A+  +   RN LA+ E+ +  YYL R  YVAA 
Sbjct: 134 DPGAARDSFNEFAQLTSRYPNSRYAPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAA 193

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            R + V+ N+ +     + +A +VE+Y  L L D A   + +++  YP 
Sbjct: 194 NRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242


>gi|162148968|ref|YP_001603429.1| hypothetical protein GDI_3198 [Gluconacetobacter diazotrophicus PAl
           5]
 gi|161787545|emb|CAP57141.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 319

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 65/249 (26%), Positives = 123/249 (49%), Gaps = 7/249 (2%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           +L +  ++A C          +    D  + V     +Y   +  L++Q ++ A   F  
Sbjct: 24  SLALILAVAACG-------GDKKAINDMESHVPPVETLYNNGIDALRDQRYALAAAEFEV 76

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
             +++P++G    + LM  +  Y   KY  A    + ++  +P S +  Y +YL  + Y 
Sbjct: 77  LQQNYPYSGYVANAQLMEGYANYLQDKYADAVQQLDRFLELHPTSADAAYAFYLRALCYY 136

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
           + + +V  DQ+ T   +  +  ++ R+  SPY + A+  V + R+ LA KE+ +GR+Y +
Sbjct: 137 EQVAEVQRDQQGTVEAMNALEEVITRFPQSPYARDAQLKVDLCRDHLAGKEMLVGRFYEE 196

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           +  Y  A+ R+Q V+ ++    H  EA+ RLVE Y+ L L D+AR   S++   YP   W
Sbjct: 197 QRNYEGAVNRYQRVVQDFQTTNHVPEALERLVEVYLDLGLTDQARRTASVLSYNYPGSKW 256

Query: 263 ARYVETLVK 271
            R+   +++
Sbjct: 257 YRFSYNMLR 265


>gi|15803119|ref|NP_289150.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli O157:H7 EDL933]
 gi|15832712|ref|NP_311485.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli O157:H7 str. Sakai]
 gi|16130516|ref|NP_417086.1| lipoprotein required for OM biogenesis, in BamABCD complex
           [Escherichia coli str. K-12 substr. MG1655]
 gi|26248958|ref|NP_754998.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli CFT073]
 gi|74313154|ref|YP_311573.1| outer membrane protein assembly complex subunit YfiO [Shigella
           sonnei Ss046]
 gi|89109397|ref|AP_003177.1| predicted lipoprotein [Escherichia coli str. K-12 substr. W3110]
 gi|91211929|ref|YP_541915.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli UTI89]
 gi|117624819|ref|YP_853732.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli APEC O1]
 gi|157155227|ref|YP_001463916.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli E24377A]
 gi|157162071|ref|YP_001459389.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli HS]
 gi|168752064|ref|ZP_02777086.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC4113]
 gi|168758665|ref|ZP_02783672.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC4401]
 gi|168762388|ref|ZP_02787395.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC4501]
 gi|168771701|ref|ZP_02796708.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC4486]
 gi|168773477|ref|ZP_02798484.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC4196]
 gi|168789498|ref|ZP_02814505.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC869]
 gi|168801713|ref|ZP_02826720.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC508]
 gi|170019126|ref|YP_001724080.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli ATCC 8739]
 gi|170082200|ref|YP_001731520.1| lipoprotein [Escherichia coli str. K-12 substr. DH10B]
 gi|170682905|ref|YP_001744780.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli SMS-3-5]
 gi|187732232|ref|YP_001881383.1| outer membrane protein assembly complex subunit YfiO [Shigella
           boydii CDC 3083-94]
 gi|188492325|ref|ZP_02999595.1| outer membrane assembly lipoprotein YfiO [Escherichia coli 53638]
 gi|191169057|ref|ZP_03030820.1| outer membrane assembly lipoprotein YfiO [Escherichia coli B7A]
 gi|193064045|ref|ZP_03045130.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E22]
 gi|193071696|ref|ZP_03052597.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E110019]
 gi|194430166|ref|ZP_03062667.1| outer membrane assembly lipoprotein YfiO [Escherichia coli B171]
 gi|194439383|ref|ZP_03071461.1| outer membrane assembly lipoprotein YfiO [Escherichia coli 101-1]
 gi|195940190|ref|ZP_03085572.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli O157:H7 str. EC4024]
 gi|208807425|ref|ZP_03249762.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC4206]
 gi|208813580|ref|ZP_03254909.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC4045]
 gi|208818633|ref|ZP_03258953.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC4042]
 gi|209395708|ref|YP_002272068.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC4115]
 gi|209920072|ref|YP_002294156.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli SE11]
 gi|215487934|ref|YP_002330365.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli O127:H6 str. E2348/69]
 gi|217327021|ref|ZP_03443104.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. TW14588]
 gi|218555175|ref|YP_002388088.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli IAI1]
 gi|218559516|ref|YP_002392429.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli S88]
 gi|218690714|ref|YP_002398926.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli ED1a]
 gi|218696220|ref|YP_002403887.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli 55989]
 gi|218701107|ref|YP_002408736.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli IAI39]
 gi|218706097|ref|YP_002413616.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli UMN026]
 gi|227888162|ref|ZP_04005967.1| DNA uptake lipoprotein ComL [Escherichia coli 83972]
 gi|237706816|ref|ZP_04537297.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           sp. 3_2_53FAA]
 gi|238901756|ref|YP_002927552.1| putative lipoprotein [Escherichia coli BW2952]
 gi|253772509|ref|YP_003035340.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli 'BL21-Gold(DE3)pLysS AG']
 gi|254037672|ref|ZP_04871730.1| outer membrane assembly lipoprotein YfiO [Escherichia sp. 1_1_43]
 gi|254162566|ref|YP_003045674.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli B str. REL606]
 gi|254794543|ref|YP_003079380.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli O157:H7 str. TW14359]
 gi|256019584|ref|ZP_05433449.1| outer membrane protein assembly complex subunit YfiO [Shigella sp.
           D9]
 gi|256024876|ref|ZP_05438741.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           sp. 4_1_40B]
 gi|260845277|ref|YP_003223055.1| putative lipoprotein [Escherichia coli O103:H2 str. 12009]
 gi|260856685|ref|YP_003230576.1| putative lipoprotein [Escherichia coli O26:H11 str. 11368]
 gi|260869277|ref|YP_003235679.1| putative lipoprotein [Escherichia coli O111:H- str. 11128]
 gi|261227480|ref|ZP_05941761.1| Lipoprotein required for outer membrane biogenesis [Escherichia
           coli O157:H7 str. FRIK2000]
 gi|261255674|ref|ZP_05948207.1| putative lipoprotein [Escherichia coli O157:H7 str. FRIK966]
 gi|291283868|ref|YP_003500686.1| putative lipoprotein [Escherichia coli O55:H7 str. CB9615]
 gi|293406105|ref|ZP_06650031.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli FVEC1412]
 gi|293415868|ref|ZP_06658508.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli B185]
 gi|297516263|ref|ZP_06934649.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli OP50]
 gi|298381837|ref|ZP_06991434.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli FVEC1302]
 gi|300819931|ref|ZP_07100114.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           107-1]
 gi|300825128|ref|ZP_07105221.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           119-7]
 gi|300900219|ref|ZP_07118405.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           198-1]
 gi|300905085|ref|ZP_07122892.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 84-1]
 gi|300921139|ref|ZP_07137520.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           115-1]
 gi|300922521|ref|ZP_07138630.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           182-1]
 gi|300930680|ref|ZP_07146064.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           187-1]
 gi|300940368|ref|ZP_07154956.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 21-1]
 gi|300948989|ref|ZP_07163045.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           116-1]
 gi|300957378|ref|ZP_07169595.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           175-1]
 gi|300986848|ref|ZP_07177831.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 45-1]
 gi|301024187|ref|ZP_07187894.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           196-1]
 gi|301026355|ref|ZP_07189803.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 69-1]
 gi|301050464|ref|ZP_07197346.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           185-1]
 gi|301305759|ref|ZP_07211846.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           124-1]
 gi|301326711|ref|ZP_07220029.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 78-1]
 gi|301644037|ref|ZP_07244055.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           146-1]
 gi|306812485|ref|ZP_07446683.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli NC101]
 gi|307139316|ref|ZP_07498672.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli H736]
 gi|307315091|ref|ZP_07594675.1| outer membrane assembly lipoprotein YfiO [Escherichia coli W]
 gi|309794108|ref|ZP_07688532.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           145-7]
 gi|312965510|ref|ZP_07779742.1| conserved hypothetical protein [Escherichia coli 2362-75]
 gi|312973161|ref|ZP_07787334.1| conserved hypothetical protein [Escherichia coli 1827-70]
 gi|331643312|ref|ZP_08344443.1| putative lipoprotein [Escherichia coli H736]
 gi|331648339|ref|ZP_08349427.1| putative lipoprotein [Escherichia coli M605]
 gi|331654055|ref|ZP_08355055.1| putative lipoprotein [Escherichia coli M718]
 gi|331658745|ref|ZP_08359687.1| putative lipoprotein [Escherichia coli TA206]
 gi|331669347|ref|ZP_08370193.1| putative lipoprotein [Escherichia coli TA271]
 gi|331674038|ref|ZP_08374800.1| putative lipoprotein [Escherichia coli TA280]
 gi|331678589|ref|ZP_08379263.1| putative lipoprotein [Escherichia coli H591]
 gi|332280709|ref|ZP_08393122.1| lipoprotein [Shigella sp. D9]
 gi|81170861|sp|P0AC04|YFIO_ECO57 RecName: Full=UPF0169 lipoprotein yfiO; Flags: Precursor
 gi|81170862|sp|P0AC03|YFIO_ECOL6 RecName: Full=UPF0169 lipoprotein yfiO; Flags: Precursor
 gi|81170863|sp|P0AC02|YFIO_ECOLI RecName: Full=UPF0169 lipoprotein yfiO; Flags: Precursor
 gi|12517019|gb|AAG57708.1|AE005490_3 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
 gi|26109364|gb|AAN81566.1|AE016764_248 Hypothetical lipoprotein yfiO precursor [Escherichia coli CFT073]
 gi|1788947|gb|AAC75644.1| lipoprotein required for OM biogenesis, in BamABCD complex
           [Escherichia coli str. K-12 substr. MG1655]
 gi|1799999|dbj|BAA16480.1| predicted lipoprotein [Escherichia coli str. K12 substr. W3110]
 gi|13362929|dbj|BAB36881.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
 gi|73856631|gb|AAZ89338.1| conserved hypothetical protein [Shigella sonnei Ss046]
 gi|91073503|gb|ABE08384.1| hypothetical protein UTI89_C2928 [Escherichia coli UTI89]
 gi|115513943|gb|ABJ02018.1| putative lipoprotein [Escherichia coli APEC O1]
 gi|157067751|gb|ABV07006.1| outer membrane assembly lipoprotein YfiO [Escherichia coli HS]
 gi|157077257|gb|ABV16965.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E24377A]
 gi|169754054|gb|ACA76753.1| conserved hypothetical protein [Escherichia coli ATCC 8739]
 gi|169890035|gb|ACB03742.1| predicted lipoprotein [Escherichia coli str. K-12 substr. DH10B]
 gi|170520623|gb|ACB18801.1| outer membrane assembly lipoprotein YfiO [Escherichia coli SMS-3-5]
 gi|187429224|gb|ACD08498.1| outer membrane assembly lipoprotein YfiO [Shigella boydii CDC
           3083-94]
 gi|187770689|gb|EDU34533.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC4196]
 gi|188013996|gb|EDU52118.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC4113]
 gi|188487524|gb|EDU62627.1| outer membrane assembly lipoprotein YfiO [Escherichia coli 53638]
 gi|189354558|gb|EDU72977.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC4401]
 gi|189359602|gb|EDU78021.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC4486]
 gi|189367289|gb|EDU85705.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC4501]
 gi|189370903|gb|EDU89319.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC869]
 gi|189376189|gb|EDU94605.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC508]
 gi|190900898|gb|EDV60684.1| outer membrane assembly lipoprotein YfiO [Escherichia coli B7A]
 gi|192929280|gb|EDV82889.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E22]
 gi|192954991|gb|EDV85493.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E110019]
 gi|194411791|gb|EDX28112.1| outer membrane assembly lipoprotein YfiO [Escherichia coli B171]
 gi|194421745|gb|EDX37754.1| outer membrane assembly lipoprotein YfiO [Escherichia coli 101-1]
 gi|208727226|gb|EDZ76827.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC4206]
 gi|208734857|gb|EDZ83544.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC4045]
 gi|208738756|gb|EDZ86438.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC4042]
 gi|209157108|gb|ACI34541.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. EC4115]
 gi|209762668|gb|ACI79646.1| hypothetical protein ECs3458 [Escherichia coli]
 gi|209762670|gb|ACI79647.1| hypothetical protein ECs3458 [Escherichia coli]
 gi|209762672|gb|ACI79648.1| hypothetical protein ECs3458 [Escherichia coli]
 gi|209762674|gb|ACI79649.1| hypothetical protein ECs3458 [Escherichia coli]
 gi|209762676|gb|ACI79650.1| hypothetical protein ECs3458 [Escherichia coli]
 gi|209913331|dbj|BAG78405.1| putative lipoprotein [Escherichia coli SE11]
 gi|215266006|emb|CAS10417.1| predicted lipoprotein [Escherichia coli O127:H6 str. E2348/69]
 gi|217319388|gb|EEC27813.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
           str. TW14588]
 gi|218352952|emb|CAU98751.1| putative lipoprotein [Escherichia coli 55989]
 gi|218361943|emb|CAQ99545.1| putative lipoprotein [Escherichia coli IAI1]
 gi|218366285|emb|CAR04037.1| putative lipoprotein [Escherichia coli S88]
 gi|218371093|emb|CAR18922.1| putative lipoprotein [Escherichia coli IAI39]
 gi|218428278|emb|CAR09056.1| putative lipoprotein [Escherichia coli ED1a]
 gi|218433194|emb|CAR14093.1| putative lipoprotein [Escherichia coli UMN026]
 gi|226839296|gb|EEH71317.1| outer membrane assembly lipoprotein YfiO [Escherichia sp. 1_1_43]
 gi|226899856|gb|EEH86115.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           sp. 3_2_53FAA]
 gi|227834802|gb|EEJ45268.1| DNA uptake lipoprotein ComL [Escherichia coli 83972]
 gi|238862627|gb|ACR64625.1| predicted lipoprotein [Escherichia coli BW2952]
 gi|242378191|emb|CAQ32966.1| BamD, subunit of Outer Membrane Protein Assembly Complex
           [Escherichia coli BL21(DE3)]
 gi|253323553|gb|ACT28155.1| outer membrane assembly lipoprotein YfiO [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253974467|gb|ACT40138.1| predicted lipoprotein [Escherichia coli B str. REL606]
 gi|253978634|gb|ACT44304.1| predicted lipoprotein [Escherichia coli BL21(DE3)]
 gi|254593943|gb|ACT73304.1| Lipoprotein required for outer membrane biogenesis [Escherichia
           coli O157:H7 str. TW14359]
 gi|257755334|dbj|BAI26836.1| predicted lipoprotein [Escherichia coli O26:H11 str. 11368]
 gi|257760424|dbj|BAI31921.1| predicted lipoprotein [Escherichia coli O103:H2 str. 12009]
 gi|257765633|dbj|BAI37128.1| predicted lipoprotein [Escherichia coli O111:H- str. 11128]
 gi|260448329|gb|ACX38751.1| outer membrane assembly lipoprotein YfiO [Escherichia coli DH1]
 gi|281179643|dbj|BAI55973.1| putative lipoprotein [Escherichia coli SE15]
 gi|284922543|emb|CBG35630.1| putative lipoprotein [Escherichia coli 042]
 gi|290763741|gb|ADD57702.1| predicted lipoprotein [Escherichia coli O55:H7 str. CB9615]
 gi|291426111|gb|EFE99143.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli FVEC1412]
 gi|291432057|gb|EFF05039.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli B185]
 gi|294489858|gb|ADE88614.1| outer membrane assembly lipoprotein YfiO [Escherichia coli IHE3034]
 gi|298276977|gb|EFI18493.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli FVEC1302]
 gi|299880529|gb|EFI88740.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           196-1]
 gi|300297835|gb|EFJ54220.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           185-1]
 gi|300315881|gb|EFJ65665.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           175-1]
 gi|300356254|gb|EFJ72124.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           198-1]
 gi|300395570|gb|EFJ79108.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 69-1]
 gi|300403012|gb|EFJ86550.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 84-1]
 gi|300407858|gb|EFJ91396.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 45-1]
 gi|300411912|gb|EFJ95222.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           115-1]
 gi|300421133|gb|EFK04444.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           182-1]
 gi|300451546|gb|EFK15166.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           116-1]
 gi|300454822|gb|EFK18315.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 21-1]
 gi|300461454|gb|EFK24947.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           187-1]
 gi|300522400|gb|EFK43469.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           119-7]
 gi|300527519|gb|EFK48581.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           107-1]
 gi|300839013|gb|EFK66773.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           124-1]
 gi|300846634|gb|EFK74394.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 78-1]
 gi|301077611|gb|EFK92417.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           146-1]
 gi|305854523|gb|EFM54961.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli NC101]
 gi|306905520|gb|EFN36054.1| outer membrane assembly lipoprotein YfiO [Escherichia coli W]
 gi|307554610|gb|ADN47385.1| outer membrane assembly lipoprotein YfiO [Escherichia coli ABU
           83972]
 gi|307625853|gb|ADN70157.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli UM146]
 gi|308122013|gb|EFO59275.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           145-7]
 gi|309702977|emb|CBJ02308.1| putative lipoprotein [Escherichia coli ETEC H10407]
 gi|310333103|gb|EFQ00317.1| conserved hypothetical protein [Escherichia coli 1827-70]
 gi|312289930|gb|EFR17818.1| conserved hypothetical protein [Escherichia coli 2362-75]
 gi|312947169|gb|ADR27996.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli O83:H1 str. NRG 857C]
 gi|315061910|gb|ADT76237.1| predicted lipoprotein [Escherichia coli W]
 gi|315137215|dbj|BAJ44374.1| putative lipoprotein [Escherichia coli DH1]
 gi|315253123|gb|EFU33091.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 85-1]
 gi|315284806|gb|EFU44251.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           110-3]
 gi|315290936|gb|EFU50301.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           153-1]
 gi|315298637|gb|EFU57892.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 16-3]
 gi|315615336|gb|EFU95970.1| outer membrane assembly lipoprotein YfiO [Escherichia coli 3431]
 gi|320177088|gb|EFW52105.1| outer membrane protein assembly complex subunit YfiO [Shigella
           dysenteriae CDC 74-1112]
 gi|320185009|gb|EFW59791.1| outer membrane protein assembly complex subunit YfiO [Shigella
           flexneri CDC 796-83]
 gi|320188932|gb|EFW63591.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli O157:H7 str. EC1212]
 gi|320194760|gb|EFW69389.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli WV_060327]
 gi|320198370|gb|EFW72972.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli EC4100B]
 gi|320640779|gb|EFX10277.1| outer membrane biogenesis protein BamD [Escherichia coli O157:H7
           str. G5101]
 gi|320646124|gb|EFX15069.1| outer membrane biogenesis protein BamD [Escherichia coli O157:H-
           str. 493-89]
 gi|320651421|gb|EFX19822.1| outer membrane biogenesis protein BamD [Escherichia coli O157:H-
           str. H 2687]
 gi|320657026|gb|EFX24849.1| outer membrane biogenesis protein BamD [Escherichia coli O55:H7
           str. 3256-97 TW 07815]
 gi|320662690|gb|EFX30034.1| outer membrane biogenesis protein BamD [Escherichia coli O55:H7
           str. USDA 5905]
 gi|320667507|gb|EFX34431.1| outer membrane biogenesis protein BamD [Escherichia coli O157:H7
           str. LSU-61]
 gi|323156251|gb|EFZ42410.1| outer membrane assembly lipoprotein YfiO [Escherichia coli EPECa14]
 gi|323167769|gb|EFZ53464.1| outer membrane assembly lipoprotein YfiO [Shigella sonnei 53G]
 gi|323173089|gb|EFZ58720.1| outer membrane assembly lipoprotein YfiO [Escherichia coli LT-68]
 gi|323177277|gb|EFZ62865.1| outer membrane assembly lipoprotein YfiO [Escherichia coli 1180]
 gi|323184528|gb|EFZ69902.1| outer membrane assembly lipoprotein YfiO [Escherichia coli 1357]
 gi|323188382|gb|EFZ73673.1| outer membrane assembly lipoprotein YfiO [Escherichia coli RN587/1]
 gi|323377509|gb|ADX49777.1| outer membrane assembly lipoprotein YfiO [Escherichia coli KO11]
 gi|323935609|gb|EGB31929.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E1520]
 gi|323941385|gb|EGB37569.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E482]
 gi|323946276|gb|EGB42309.1| outer membrane assembly lipoprotein YfiO [Escherichia coli H120]
 gi|323957036|gb|EGB52762.1| outer membrane assembly lipoprotein YfiO [Escherichia coli H263]
 gi|323960545|gb|EGB56174.1| outer membrane assembly lipoprotein YfiO [Escherichia coli H489]
 gi|323971460|gb|EGB66696.1| outer membrane assembly lipoprotein YfiO [Escherichia coli TA007]
 gi|323978452|gb|EGB73536.1| outer membrane assembly lipoprotein YfiO [Escherichia coli TW10509]
 gi|324005835|gb|EGB75054.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 57-2]
 gi|324016578|gb|EGB85797.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           117-3]
 gi|324120054|gb|EGC13930.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E1167]
 gi|326344349|gb|EGD68107.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli O157:H7 str. 1125]
 gi|326347718|gb|EGD71435.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli O157:H7 str. 1044]
 gi|330912360|gb|EGH40870.1| putative component of the lipoprotein assembly complex [Escherichia
           coli AA86]
 gi|331036783|gb|EGI09007.1| putative lipoprotein [Escherichia coli H736]
 gi|331042086|gb|EGI14228.1| putative lipoprotein [Escherichia coli M605]
 gi|331047437|gb|EGI19514.1| putative lipoprotein [Escherichia coli M718]
 gi|331053327|gb|EGI25356.1| putative lipoprotein [Escherichia coli TA206]
 gi|331063015|gb|EGI34928.1| putative lipoprotein [Escherichia coli TA271]
 gi|331068777|gb|EGI40170.1| putative lipoprotein [Escherichia coli TA280]
 gi|331073419|gb|EGI44740.1| putative lipoprotein [Escherichia coli H591]
 gi|332103061|gb|EGJ06407.1| lipoprotein [Shigella sp. D9]
 gi|332344466|gb|AEE57800.1| conserved hypothetical protein [Escherichia coli UMNK88]
 gi|332999361|gb|EGK18946.1| outer membrane assembly lipoprotein YfiO [Shigella flexneri VA-6]
 gi|333001155|gb|EGK20725.1| outer membrane assembly lipoprotein YfiO [Shigella flexneri K-272]
 gi|333015793|gb|EGK35130.1| outer membrane assembly lipoprotein YfiO [Shigella flexneri K-227]
          Length = 245

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 100/248 (40%), Gaps = 17/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +    FL G     S++   D+        E+Y  A   L++ N+ +A  
Sbjct: 1   MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWRQAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y       A +  + +I   P   N+DYV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   +                D +  +      S++V  Y NS Y   A   +   +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E  +  YY +RG +VA + R + +L +Y D +   +A+  +  AY  + +  +A +
Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEK 233

Query: 249 VVSLIQER 256
           V  +I   
Sbjct: 234 VAKIIAAN 241


>gi|319405998|emb|CBI79629.1| competence lipoprotein precursor [Bartonella sp. AR 15-3]
          Length = 297

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 85/254 (33%), Positives = 131/254 (51%), Gaps = 2/254 (0%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDS-VTDVRYQREVYEKAVLFLKEQNFSKAY 77
           + K  + I     VCFL G   +    +     V  +     +Y +A+  L     S+A 
Sbjct: 19  VRKVFIGILLG-GVCFLAGCLGKGKNILDPSVHVLKIDPPDVLYNQALANLDVGRLSEAA 77

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           + F    + + +    RKSL+M AF  Y   KY  A S+ + YI+ YP + +  Y YY++
Sbjct: 78  KKFAVIEKQYAYTEWGRKSLIMGAFTNYRLAKYDDAISMAQHYISLYPLADDSAYAYYII 137

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
           G+S  + I DV  DQ+ TK  +  M  ++ERY  S YV  A+  +  GR QLA KE++IG
Sbjct: 138 GLSSFRRIPDVTRDQQDTKRAIAAMQILIERYPQSEYVSDAKAKIRFGREQLAGKEMQIG 197

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           RYY +  +Y+AA  RF+ V+  Y D    EEA+ RL E   AL L  EA+   +++   Y
Sbjct: 198 RYYEEGRQYLAASKRFRTVIEEYPDTNQIEEALFRLTEVNFALGLTMEAQTAAAILGRNY 257

Query: 258 PQGYWARYVETLVK 271
           P+  W ++   L++
Sbjct: 258 PESKWYKFSYDLLQ 271


>gi|330721663|gb|EGG99674.1| putative component of the lipoprotein assembly complex (forms a
           complex with YaeT2C YfgL2C and NlpB) [gamma
           proteobacterium IMCC2047]
          Length = 286

 Score =  266 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 59/249 (23%), Positives = 106/249 (42%), Gaps = 16/249 (6%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
              +          L G      R+   +S      +   +E A+   K  N+S A E  
Sbjct: 5   SLKILASLVCLALLLTGCSSNDKREFTENS------ETAFFENAMKASKAGNYSTAIELL 58

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
            +    +PF   ++++ L   F  Y +  Y+ + +    +I  +P+   +DYVYYL G++
Sbjct: 59  EELESRYPFGRYSQQAQLELIFAYYKSADYESSRATSSRFIRLHPQHLKLDYVYYLKGLA 118

Query: 141 YAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
             Q  +D             D  A +  L     ++ R+ +S Y   AR  +   RNQLA
Sbjct: 119 SYQQDKDFFDRFLNIETSQRDMGAARQSLVDFGILLNRFPDSQYADEARARMIYLRNQLA 178

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
             E+ +G+YY+KR  ++AA  R + V+ NY       + +A +++ Y  L L D   +  
Sbjct: 179 EHEIHVGQYYIKRKAWIAAANRGRYVVENYPTTPSVPDGLALMIQGYQQLGLTDLVNQTQ 238

Query: 251 SLIQERYPQ 259
            ++ +  P 
Sbjct: 239 KILSQNAPN 247


>gi|16761517|ref|NP_457134.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Typhi str. CT18]
 gi|29142988|ref|NP_806330.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
 gi|213051816|ref|ZP_03344694.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|213424874|ref|ZP_03357624.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Typhi str. E02-1180]
 gi|213850145|ref|ZP_03381043.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Typhi str. M223]
 gi|25306749|pir||AD0832 probable lipoprotein STY2852 [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16503818|emb|CAD05843.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
           Typhi]
 gi|29138620|gb|AAO70190.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
          Length = 245

 Score =  266 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 53/252 (21%), Positives = 100/252 (39%), Gaps = 17/252 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +    FL G     S++   D+        E+Y  A   L++ N+ +A  
Sbjct: 1   MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWKQAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y       A +  + ++   P   N+DYV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVMYMRG 113

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   +   V            D +  +      S++V  Y NS Y   A   +   +++
Sbjct: 114 LTNMALDDSVLQGFFGVDRSDRDPQHARAAFNDFSKLVRSYPNSQYTTDATKRLVFLKDR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E  +  YY  RG +VA + R + +L NY D +   +A+  +  AY  + L  +A +
Sbjct: 174 LAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATRDALPLMENAYRQMQLNAQADK 233

Query: 249 VVSLIQERYPQG 260
           V  +I       
Sbjct: 234 VAKIIAANSKNT 245


>gi|146276754|ref|YP_001166913.1| TPR repeat-containing protein [Rhodobacter sphaeroides ATCC 17025]
 gi|145554995|gb|ABP69608.1| Tetratricopeptide TPR_2 repeat protein [Rhodobacter sphaeroides
           ATCC 17025]
          Length = 278

 Score =  266 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 78/253 (30%), Positives = 133/253 (52%), Gaps = 5/253 (1%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ-NFSKAY 77
           +   A  +  ++ V  L G    S ++  L++ T      ++Y++    L+ Q    +A 
Sbjct: 2   VKSGARMLGTALCVALLTGCGGGSQKEPPLENFT----AEQIYQRGEYELEAQTKPDRAI 57

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
            YF++  R +P+   A+++L+M A+  + A  Y++A    + ++  YP  ++  Y  YL+
Sbjct: 58  RYFSEVERLYPYTEWAKRALIMQAYSYHKAKNYEEARGAAQRFLDFYPGDEDAAYAQYLL 117

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
            +SY   I +V  DQ  T   LQ +  ++E+Y +S Y + A     +  + LAAKE+EIG
Sbjct: 118 ALSYYDQIDEVGRDQGLTFQALQALRVVIEQYPDSEYAQSAILKFDLAFDHLAAKEMEIG 177

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           RYYLKRG Y AAI RF+ V+  +    H  EA+ RLVE Y+AL L +EA+   +++   Y
Sbjct: 178 RYYLKRGHYSAAINRFRTVVEEFQTTTHTAEALHRLVEGYLALGLQNEAQTAGAILGHNY 237

Query: 258 PQGYWARYVETLV 270
               +      L+
Sbjct: 238 RSSPFYDDSYRLL 250


>gi|292490723|ref|YP_003526162.1| outer membrane assembly lipoprotein YfiO [Nitrosococcus halophilus
           Nc4]
 gi|291579318|gb|ADE13775.1| outer membrane assembly lipoprotein YfiO [Nitrosococcus halophilus
           Nc4]
          Length = 260

 Score =  266 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 57/254 (22%), Positives = 108/254 (42%), Gaps = 18/254 (7%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
               Y  +L +   +  C  +G           +           Y +A   L   N+ +
Sbjct: 1   MRIFYFLSLFLVLWLGGCSWLG--------KPQEQPEADWNVERYYSEAKAALNSGNYQQ 52

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A   + Q    +PF   A+++LL SA+  Y   + + A +  + +I  YP + ++DY +Y
Sbjct: 53  AITLYEQLEARYPFGVYAQQALLESAYAYYKFDEPESALAALDRFIRLYPLNPHMDYAHY 112

Query: 136 LVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           L G+                 +   D  + +  L+    +V+R+ +S Y K     +   
Sbjct: 113 LKGLVNFHRGIGLIEKYIPRDESQRDPESARDALKDFRTLVKRFPDSRYAKDGAQRIVYL 172

Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
           RN+LA  E+ + +YY++RG Y+ AI R + V+ NY       EA+  +   Y  L L + 
Sbjct: 173 RNRLAQHEINVAQYYMRRGAYIGAINRAKYVVENYQRTPTVPEALTIMARGYKVLGLDEL 232

Query: 246 AREVVSLIQERYPQ 259
           A + + +++  +P 
Sbjct: 233 AEDTLRVLETNFPG 246


>gi|66043990|ref|YP_233831.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
           syringae B728a]
 gi|63254697|gb|AAY35793.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
           syringae B728a]
 gi|330954254|gb|EGH54514.1| competence lipoprotein ComL, putative [Pseudomonas syringae Cit 7]
          Length = 340

 Score =  266 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 14/229 (6%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
            SS++V  +++++V    E+Y++A   L   +++ A E        +PF   A ++ L  
Sbjct: 18  CSSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLEL 73

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPY 150
            +  Y  G+ + A S  E +I  +P+  NVDY YY+ G++                    
Sbjct: 74  IYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKR 133

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
           D  A +      +++  R+ NS Y   A+  +   RN LA+ E+ +  YYL R  YVAA 
Sbjct: 134 DPGAARDSFNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAA 193

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            R + V+ N+ +     + +A +VE+Y  L L D A   + +++  YP 
Sbjct: 194 NRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242


>gi|302383769|ref|YP_003819592.1| outer membrane assembly lipoprotein YfiO [Brevundimonas
           subvibrioides ATCC 15264]
 gi|302194397|gb|ADL01969.1| outer membrane assembly lipoprotein YfiO [Brevundimonas
           subvibrioides ATCC 15264]
          Length = 286

 Score =  266 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 70/254 (27%), Positives = 118/254 (46%), Gaps = 5/254 (1%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           L +  L +  +     L      + R        + R    +Y      L+   +S A +
Sbjct: 11  LRRGGLILMAAAVTLTLPACGGGAGR---PRLAYEERPVELLYNTGYTRLQSNRWSDAVD 67

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
           YF +  R  P++  +R+++LM  +  Y  G Y+++ +  + +I+ +P S +  Y +Y+  
Sbjct: 68  YFQEVERQHPYSEWSRRAILMQVYAHYQNGSYEESIAAADRFISLFPGSPSAAYAFYMRA 127

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
             + + I DV  DQ   +  L  +  +  RY  S Y   A   + +  +QLA KE+ IGR
Sbjct: 128 TCHFEQIVDVGRDQNQAQQALDGLRDVARRYPGSSYATDATVKIDMVNDQLAGKEMSIGR 187

Query: 199 YYLKRGEYVAAIPRFQLVLAN--YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           YY +    +AAI R++ V+ N  Y    H  EA+ RLVE Y++L L DEA    S++   
Sbjct: 188 YYQRANLPLAAIGRYKAVIDNEAYQRTSHTPEALYRLVEVYLSLGLKDEAERNGSVLGFN 247

Query: 257 YPQGYWARYVETLV 270
           YP   W      L+
Sbjct: 248 YPGSPWYSQAYALL 261


>gi|332088104|gb|EGI93229.1| outer membrane assembly lipoprotein YfiO [Shigella boydii 5216-82]
          Length = 245

 Score =  266 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 100/248 (40%), Gaps = 17/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +    FL G     S++   D+        E+Y  A   L++ N+ +A  
Sbjct: 1   MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWRQAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y       A +  + +I   P   N+DYV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   +                D +  +      S++V  Y NS Y   A   +   +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E  +  YY +RG +VA + R + +L +Y D +   +A+  +  AY  + +  +A +
Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQINAQAEK 233

Query: 249 VVSLIQER 256
           V  +I   
Sbjct: 234 VAKIIAAN 241


>gi|213971043|ref|ZP_03399163.1| competence lipoprotein ComL [Pseudomonas syringae pv. tomato T1]
 gi|301384234|ref|ZP_07232652.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
           tomato Max13]
 gi|302059467|ref|ZP_07251008.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
           tomato K40]
 gi|302134991|ref|ZP_07260981.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
           tomato NCPPB 1108]
 gi|213924151|gb|EEB57726.1| competence lipoprotein ComL [Pseudomonas syringae pv. tomato T1]
 gi|331018388|gb|EGH98444.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 340

 Score =  266 bits (681), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 14/229 (6%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
            SS++V  +++++V    E+Y++A   L   +++ A E        +PF   A ++ L  
Sbjct: 18  CSSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLEL 73

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPY 150
            +  Y  G+ + A S  E +I  +P+  NVDY YY+ G++                    
Sbjct: 74  IYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKR 133

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
           D  A +      +++  RY NS Y   A+  +   RN LA+ E+ +  YYL R  YVAA 
Sbjct: 134 DPGAARDSFNEFAQLTSRYPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAA 193

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            R + V+ N+ +     + +A +VE+Y  L L D A   + +++  YP 
Sbjct: 194 NRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242


>gi|146312716|ref|YP_001177790.1| outer membrane protein assembly complex subunit YfiO [Enterobacter
           sp. 638]
 gi|145319592|gb|ABP61739.1| conserved hypothetical protein [Enterobacter sp. 638]
          Length = 245

 Score =  266 bits (681), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 49/251 (19%), Positives = 98/251 (39%), Gaps = 20/251 (7%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
             ++         S+A+    G     S +   D+        E+Y  A   L++ N+ +
Sbjct: 1   MTRMKYLVAAATLSLALVGCSG-----SNEQVPDNPP-----NEIYATAQQKLQDGNWKQ 50

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A          +PF   +++  L   +  Y       A +  + ++   P   N+DYV Y
Sbjct: 51  AITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQATIDRFMRLNPTHPNIDYVMY 110

Query: 136 LVGMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           + G++   +                D +  +      S++V  Y NS Y   A   +   
Sbjct: 111 MRGLTNMALDDSALQGFFGVDRSDRDPQHARDAFNDFSKLVRGYPNSQYTTDATKRLVFL 170

Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
           +++LA  E  +  YY +RG +VA + R + +L +Y D +   + +  +  AY  + +  +
Sbjct: 171 KDRLAKYEYSVAEYYTRRGAWVAVVNRVEGMLRDYPDTQATRDGLKLMENAYRQMQMNAQ 230

Query: 246 AREVVSLIQER 256
           A +V  +I   
Sbjct: 231 AEKVAKIIAAN 241


>gi|289674869|ref|ZP_06495759.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
           syringae FF5]
 gi|330941211|gb|EGH44079.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
           pisi str. 1704B]
          Length = 340

 Score =  266 bits (681), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 14/229 (6%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
            SS++V  +++++V    E+Y++A   L   +++ A E        +PF   A ++ L  
Sbjct: 18  CSSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLEL 73

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPY 150
            +  Y  G+ + A S  E +I  +P+  NVDY YY+ G++                    
Sbjct: 74  IYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKR 133

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
           D  A +      +++  R+ NS Y   A+  +   RN LA+ E+ +  YYL R  YVAA 
Sbjct: 134 DPGAARDSFNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAA 193

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            R + V+ N+ +     + +A +VE+Y  L L D A   + +++  YP 
Sbjct: 194 NRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242


>gi|283835693|ref|ZP_06355434.1| competence lipoprotein ComL [Citrobacter youngae ATCC 29220]
 gi|291068910|gb|EFE07019.1| competence lipoprotein ComL [Citrobacter youngae ATCC 29220]
          Length = 245

 Score =  266 bits (681), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 99/248 (39%), Gaps = 17/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +    FL G     S++   D+        E+Y  A   L++ N+ +A  
Sbjct: 1   MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWKQAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y       A +  + +I   P   N+DYV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   +                D +  +      S++V  Y NS Y   A   +   +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVRGYPNSQYTTDATKRLVFLKDR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E  +  YY  RG +VA + R + +L +Y D +   +A+  +  AY  + +  +A +
Sbjct: 174 LAKYEYSVAEYYTARGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEK 233

Query: 249 VVSLIQER 256
           V  +I   
Sbjct: 234 VAKIIAAN 241


>gi|222034299|emb|CAP77040.1| UPF0169 lipoprotein yfiO [Escherichia coli LF82]
          Length = 245

 Score =  266 bits (681), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 101/248 (40%), Gaps = 17/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +    FL G     S++   D+        E+Y  A   L++ N+ +A  
Sbjct: 1   MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWRQAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y       A ++ + +I   P   N+DYV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAVIDRFIRLNPTHPNIDYVMYMRG 113

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   +                D +  +      S++V  Y NS Y   A   +   +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E  +  YY +RG +VA + R + +L +Y D +   +A+  +  AY  + +  +A +
Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEK 233

Query: 249 VVSLIQER 256
           V  +I   
Sbjct: 234 VAKIIAAN 241


>gi|24113931|ref|NP_708441.1| outer membrane protein assembly complex subunit YfiO [Shigella
           flexneri 2a str. 301]
 gi|30063990|ref|NP_838161.1| outer membrane protein assembly complex subunit YfiO [Shigella
           flexneri 2a str. 2457T]
 gi|24053035|gb|AAN44148.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
 gi|30042246|gb|AAP17971.1| hypothetical protein S2828 [Shigella flexneri 2a str. 2457T]
 gi|281602001|gb|ADA74985.1| putative lipoprotein [Shigella flexneri 2002017]
 gi|313648269|gb|EFS12713.1| hypothetical protein SF2457T_3266 [Shigella flexneri 2a str. 2457T]
 gi|332753863|gb|EGJ84240.1| outer membrane assembly lipoprotein YfiO [Shigella flexneri
           4343-70]
 gi|332754014|gb|EGJ84386.1| outer membrane assembly lipoprotein YfiO [Shigella flexneri K-671]
 gi|332755663|gb|EGJ86026.1| outer membrane assembly lipoprotein YfiO [Shigella flexneri
           2747-71]
 gi|332765570|gb|EGJ95783.1| bamD [Shigella flexneri 2930-71]
 gi|332997823|gb|EGK17433.1| outer membrane assembly lipoprotein YfiO [Shigella flexneri K-218]
 gi|333015915|gb|EGK35251.1| outer membrane assembly lipoprotein YfiO [Shigella flexneri K-304]
          Length = 245

 Score =  266 bits (681), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 100/248 (40%), Gaps = 17/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +    FL G     S++   D+        E+Y  A   L++ N+ +A  
Sbjct: 1   MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWRQAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y       A +  + +I   P   N+DYV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   +                D +  +      S++V  Y NS Y   A   +   +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E  +  YY +RG +VA + R + +L +Y D +   +A+  +  AY  + +  +A +
Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRIEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEK 233

Query: 249 VVSLIQER 256
           V  +I   
Sbjct: 234 VAKIIAAN 241


>gi|323963905|gb|EGB59398.1| outer membrane assembly lipoprotein YfiO [Escherichia coli M863]
 gi|327252301|gb|EGE63973.1| outer membrane assembly lipoprotein YfiO [Escherichia coli STEC_7v]
          Length = 245

 Score =  266 bits (681), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 100/248 (40%), Gaps = 17/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +    FL G     S++   D+        E+Y  A   L++ N+ +A  
Sbjct: 1   MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWRQAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y       A +  + +I   P   N+DYV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   +                D +  +      S++V  Y NS Y   A   +   +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E  +  YY +RG +VA + R + +L +Y D +   +A+  +  AY  + +  +A +
Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEDMLRDYPDTQATRDALPLMENAYRQMQMNAQAEK 233

Query: 249 VVSLIQER 256
           V  +I   
Sbjct: 234 VAKIIAAN 241


>gi|298485412|ref|ZP_07003501.1| Competence lipoprotein ComL [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298160062|gb|EFI01094.1| Competence lipoprotein ComL [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
          Length = 340

 Score =  266 bits (681), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 14/229 (6%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
            SS++V  +++++V    E+Y++A   L   +++ A E        +PF   A ++ L  
Sbjct: 18  CSSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLEL 73

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPY 150
            +  Y  G+ + A S  E +I  +P+  NVDY YY+ G++                    
Sbjct: 74  IYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKR 133

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
           D  A +      +++  R+ NS Y   A+  +   RN LA+ E+ +  YYL R  YVAA 
Sbjct: 134 DPGAARDSFNEFAQLTSRFPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAA 193

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            R + V+ N+ +     + +A +VE+Y  L L D A   + +++  YP 
Sbjct: 194 NRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242


>gi|28868054|ref|NP_790673.1| competence lipoprotein ComL [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|28851290|gb|AAO54368.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
           tomato str. DC3000]
          Length = 338

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 14/229 (6%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
            SS++V  +++++V    E+Y++A   L   +++ A E        +PF   A ++ L  
Sbjct: 16  CSSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLEL 71

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPY 150
            +  Y  G+ + A S  E +I  +P+  NVDY YY+ G++                    
Sbjct: 72  IYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKR 131

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
           D  A +      +++  RY NS Y   A+  +   RN LA+ E+ +  YYL R  YVAA 
Sbjct: 132 DPGAARDSFNEFAQLTSRYPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAA 191

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            R + V+ N+ +     + +A +VE+Y  L L D A   + +++  YP 
Sbjct: 192 NRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 240


>gi|304392248|ref|ZP_07374190.1| lipoprotein [Ahrensia sp. R2A130]
 gi|303296477|gb|EFL90835.1| lipoprotein [Ahrensia sp. R2A130]
          Length = 278

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 77/230 (33%), Positives = 129/230 (56%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
            +  +     V       + Y +A+  L   N S+A + F +  R  P++  A+K+ +MS
Sbjct: 24  CAKDEDINSFVDPTVPADQTYNEALANLDAGNSSEAKKKFAKLDRQHPYSNYAKKAGVMS 83

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
            ++ Y + +Y +A + G+ ++  YP +    Y  YLVGMS+ + I DV  DQ + K   Q
Sbjct: 84  TYLAYRSAEYPEAIARGKRFVQLYPSNAEAPYALYLVGMSHFRQINDVTRDQDSAKAAYQ 143

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
            MS +V+RY  S YV+ A+  + + ++QLA KE+ +GRYY +R EY+A+I R++ V+  +
Sbjct: 144 AMSNLVQRYPESEYVEDAKRKMRISKDQLAGKEMLVGRYYQERREYLASINRYRTVVEQF 203

Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
            D  H EEA+ARL E+Y AL L  EA+   +++   +P   W +    L+
Sbjct: 204 EDTRHVEEALARLTESYYALGLQSEAQTAAAVLGHNFPDSQWYKDSYALL 253


>gi|295097163|emb|CBK86253.1| outer membrane assembly lipoprotein YfiO [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 245

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 49/251 (19%), Positives = 99/251 (39%), Gaps = 20/251 (7%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
             ++         S+A+    G     S +   D+        E+Y  A   L++ N+ +
Sbjct: 1   MTRMKYLVAAATLSLALVGCSG-----SNEQVPDNPP-----NEIYATAQQKLQDGNWKQ 50

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A          +PF   +++  L   +  Y       A +  + ++   P   N+DYV Y
Sbjct: 51  AITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQATIDRFMRLNPTHPNIDYVMY 110

Query: 136 LVGMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           + G++   +                D +  +      S++V  Y NS Y+  A   +   
Sbjct: 111 MRGLTNMALDDSALQGFFGVDRSDRDPQHARDAFNDFSKLVRSYPNSQYITDATKRLVFL 170

Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
           +++LA  E  +  YY +RG +VA + R + +L +Y D +   + +  +  AY  + +  +
Sbjct: 171 KDRLAKYEYSVAEYYTRRGAWVAVVNRVEGMLRDYPDTQATRDGLKLMENAYRQMQMTAQ 230

Query: 246 AREVVSLIQER 256
           A +V  +I   
Sbjct: 231 ADKVAKIIAAN 241


>gi|329848741|ref|ZP_08263769.1| hypothetical protein ABI_18130 [Asticcacaulis biprosthecum C19]
 gi|328843804|gb|EGF93373.1| hypothetical protein ABI_18130 [Asticcacaulis biprosthecum C19]
          Length = 295

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 77/248 (31%), Positives = 132/248 (53%), Gaps = 3/248 (1%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           A+ +   +A+  L G   +         V + R    +Y   +  L ++++++A +YF +
Sbjct: 11  AMVLAAGMALTALSGCAGKGDEQHL---VYEERPVELLYATGMERLDDKSWNEAGQYFEE 67

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
             R  P++  +R++++M+ +  Y AGKY +A++  +++I  YP S+   Y YY+  +   
Sbjct: 68  VQRQHPYSEWSRRAIVMTIYTHYQAGKYAEASAASDQFIHLYPGSELTPYAYYMKAICSF 127

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
           + I DV  DQ +T      +S +V RY +S Y K AR  + + ++QLA KE+EIGRYYL 
Sbjct: 128 EQIVDVGRDQASTTAAQALLSDVVRRYPSSEYAKDARVKIDMVQDQLAGKEMEIGRYYLN 187

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
             + +AAI RF+ V + Y    H  EA+ RLVEA   + L +EA    +++   YP   W
Sbjct: 188 DNQPLAAIGRFKTVASTYQTTSHTPEALYRLVEANEVMGLHEEAMRNGAVLGYNYPGDRW 247

Query: 263 ARYVETLV 270
                 L+
Sbjct: 248 YAAAYKLL 255


>gi|110642758|ref|YP_670488.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli 536]
 gi|191174570|ref|ZP_03036065.1| outer membrane assembly lipoprotein YfiO [Escherichia coli F11]
 gi|300976567|ref|ZP_07173519.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           200-1]
 gi|110344350|gb|ABG70587.1| hypothetical lipoprotein YfiO precursor [Escherichia coli 536]
 gi|190905143|gb|EDV64787.1| outer membrane assembly lipoprotein YfiO [Escherichia coli F11]
 gi|300308509|gb|EFJ63029.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
           200-1]
 gi|324012461|gb|EGB81680.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 60-1]
          Length = 245

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 100/248 (40%), Gaps = 17/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +    FL G     S++   D+        E+Y  A   L++ N+ +A  
Sbjct: 1   MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWRQAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y       A +  + +I   P   N+DYV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   +                D +  +      S++V  Y NS Y   A   +   +++
Sbjct: 114 LTNMALDDSALQRFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E  +  YY +RG +VA + R + +L +Y D +   +A+  +  AY  + +  +A +
Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEK 233

Query: 249 VVSLIQER 256
           V  +I   
Sbjct: 234 VAKIIAAN 241


>gi|22124819|ref|NP_668242.1| outer membrane protein assembly complex subunit YfiO [Yersinia
           pestis KIM 10]
 gi|45440504|ref|NP_992043.1| outer membrane protein assembly complex subunit YfiO [Yersinia
           pestis biovar Microtus str. 91001]
 gi|51595195|ref|YP_069386.1| outer membrane protein assembly complex subunit YfiO [Yersinia
           pseudotuberculosis IP 32953]
 gi|108808760|ref|YP_652676.1| outer membrane protein assembly complex subunit YfiO [Yersinia
           pestis Antiqua]
 gi|108810983|ref|YP_646750.1| outer membrane protein assembly complex subunit YfiO [Yersinia
           pestis Nepal516]
 gi|145600173|ref|YP_001164249.1| outer membrane protein assembly complex subunit YfiO [Yersinia
           pestis Pestoides F]
 gi|153948219|ref|YP_001402172.1| outer membrane protein assembly complex subunit YfiO [Yersinia
           pseudotuberculosis IP 31758]
 gi|153997672|ref|ZP_02022772.1| putative lipoprotein [Yersinia pestis CA88-4125]
 gi|162419347|ref|YP_001607808.1| outer membrane protein assembly complex subunit YfiO [Yersinia
           pestis Angola]
 gi|165926624|ref|ZP_02222456.1| putative lipoprotein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165936801|ref|ZP_02225368.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. IP275]
 gi|166010083|ref|ZP_02230981.1| putative lipoprotein [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166213080|ref|ZP_02239115.1| putative lipoprotein [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167399369|ref|ZP_02304893.1| putative lipoprotein [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167421522|ref|ZP_02313275.1| putative lipoprotein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167423440|ref|ZP_02315193.1| putative lipoprotein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167470272|ref|ZP_02334976.1| putative lipoprotein [Yersinia pestis FV-1]
 gi|170025567|ref|YP_001722072.1| outer membrane protein assembly complex subunit YfiO [Yersinia
           pseudotuberculosis YPIII]
 gi|186894213|ref|YP_001871325.1| outer membrane protein assembly complex subunit YfiO [Yersinia
           pseudotuberculosis PB1/+]
 gi|218930303|ref|YP_002348178.1| outer membrane protein assembly complex subunit YfiO [Yersinia
           pestis CO92]
 gi|229838894|ref|ZP_04459053.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229896562|ref|ZP_04511729.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis
           Pestoides A]
 gi|229899461|ref|ZP_04514604.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229901199|ref|ZP_04516322.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis
           Nepal516]
 gi|270489384|ref|ZP_06206458.1| outer membrane assembly lipoprotein YfiO [Yersinia pestis KIM D27]
 gi|294504992|ref|YP_003569054.1| putative lipoprotein [Yersinia pestis Z176003]
 gi|21957645|gb|AAM84493.1|AE013693_9 hypothetical protein y0911 [Yersinia pestis KIM 10]
 gi|45435361|gb|AAS60920.1| putative lipoprotein [Yersinia pestis biovar Microtus str. 91001]
 gi|51588477|emb|CAH20085.1| putative lipoprotein [Yersinia pseudotuberculosis IP 32953]
 gi|108774631|gb|ABG17150.1| lipoprotein [Yersinia pestis Nepal516]
 gi|108780673|gb|ABG14731.1| putative lipoprotein [Yersinia pestis Antiqua]
 gi|115348914|emb|CAL21871.1| putative lipoprotein [Yersinia pestis CO92]
 gi|145211869|gb|ABP41276.1| lipoprotein [Yersinia pestis Pestoides F]
 gi|149289309|gb|EDM39389.1| putative lipoprotein [Yersinia pestis CA88-4125]
 gi|152959714|gb|ABS47175.1| putative lipoprotein [Yersinia pseudotuberculosis IP 31758]
 gi|162352162|gb|ABX86110.1| putative lipoprotein [Yersinia pestis Angola]
 gi|165915450|gb|EDR34060.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. IP275]
 gi|165921552|gb|EDR38749.1| putative lipoprotein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165990990|gb|EDR43291.1| putative lipoprotein [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166205867|gb|EDR50347.1| putative lipoprotein [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166960441|gb|EDR56462.1| putative lipoprotein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167051873|gb|EDR63281.1| putative lipoprotein [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167057610|gb|EDR67356.1| putative lipoprotein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|169752101|gb|ACA69619.1| putative lipoprotein [Yersinia pseudotuberculosis YPIII]
 gi|186697239|gb|ACC87868.1| putative lipoprotein [Yersinia pseudotuberculosis PB1/+]
 gi|229681924|gb|EEO78017.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis
           Nepal516]
 gi|229687863|gb|EEO79936.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229695260|gb|EEO85307.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229700340|gb|EEO88372.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis
           Pestoides A]
 gi|262363057|gb|ACY59778.1| putative lipoprotein [Yersinia pestis D106004]
 gi|262366981|gb|ACY63538.1| putative lipoprotein [Yersinia pestis D182038]
 gi|270337888|gb|EFA48665.1| outer membrane assembly lipoprotein YfiO [Yersinia pestis KIM D27]
 gi|294355451|gb|ADE65792.1| putative lipoprotein [Yersinia pestis Z176003]
 gi|320016470|gb|ADW00042.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis
           biovar Medievalis str. Harbin 35]
          Length = 243

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 54/248 (21%), Positives = 106/248 (42%), Gaps = 17/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +     L G    S++DV  D+        E+Y  A   L++ NF  A  
Sbjct: 1   MTRMKYLVAAATLSLVLTGCS--SNKDVVPDNPP-----SELYATAQQKLQDGNFKGAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y +     A +  + ++   P   N+DYV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKSADLPMAQASIDRFMRLNPTHPNIDYVLYMRG 113

Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   +          I     D +  +   +  +++++ Y NS Y   A+  +   +++
Sbjct: 114 LTDMALDDSALQGFFGIDRSDRDPQHARAAFRDFNQLIQNYPNSQYATDAQKRLVFLKDR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E+ + +YY KRG YVA + R   ++ +Y D +   +A+  +  AY  L L  +A +
Sbjct: 174 LAKYELAVAQYYTKRGAYVAVVNRVDQMMRDYPDTQATRDALPLMENAYKQLQLNAQADK 233

Query: 249 VVSLIQER 256
           V  +I   
Sbjct: 234 VAKIIAAN 241


>gi|294669552|ref|ZP_06734619.1| hypothetical protein NEIELOOT_01451 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308465|gb|EFE49708.1| hypothetical protein NEIELOOT_01451 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 268

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 59/254 (23%), Positives = 114/254 (44%), Gaps = 13/254 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K  L +   IA+      +  S +D     +T      ++Y +A   L   N+++A +
Sbjct: 1   MKKILLVVALGIALGGCAANKGTSDKDA---QITQDWPVEKLYAEAQDELNSSNYTRAVK 57

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            +      FP    A+++ L +A+  Y   + ++A +  E +   +P+  N+DY  YL G
Sbjct: 58  LYELLESRFPQGRYAQQAQLDTAYAYYKDEEREKALAAVERFQRLHPQHPNMDYALYLKG 117

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +      +              D +A +   Q  + +V+RY  S YV+ A   +    + 
Sbjct: 118 LILFNEDKSFLNKLASQDWSDRDPKANREAYQAFAELVQRYPQSKYVEEASKQMEKLVDA 177

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E+ + RYY KRG ++AA  R Q ++  + +    EEA+A +  +Y  +     A +
Sbjct: 178 LAGNEISVARYYAKRGAHLAAANRAQNIITGFQNTRFTEEALAIMEVSYRKMNRQQLADD 237

Query: 249 VVSLIQERYPQGYW 262
              ++Q+ +PQ  +
Sbjct: 238 TRRILQQNFPQSPY 251


>gi|71736201|ref|YP_273031.1| competence lipoprotein ComL [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|289626966|ref|ZP_06459920.1| competence lipoprotein ComL [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289651378|ref|ZP_06482721.1| competence lipoprotein ComL [Pseudomonas syringae pv. aesculi str.
           2250]
 gi|71556754|gb|AAZ35965.1| competence lipoprotein ComL [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|330869190|gb|EGH03899.1| competence lipoprotein ComL [Pseudomonas syringae pv. aesculi str.
           0893_23]
 gi|330891574|gb|EGH24235.1| competence lipoprotein ComL [Pseudomonas syringae pv. mori str.
           301020]
 gi|330988805|gb|EGH86908.1| competence lipoprotein ComL [Pseudomonas syringae pv. lachrymans
           str. M301315]
          Length = 340

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 14/229 (6%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
            SS++V  +++++V    E+Y++A   L   +++ A E        +PF   A ++ L  
Sbjct: 18  CSSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLEL 73

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPY 150
            +  Y  G+ + A S  E +I  +P+  NVDY YY+ G++                    
Sbjct: 74  IYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKR 133

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
           D  A +      +++  R+ NS Y   A+  +   RN LA+ E+ +  YYL R  YVAA 
Sbjct: 134 DPGAARDSFNEFAQLTSRFPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAA 193

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            R + V+ N+ +     + +A +VE+Y  L L D A   + +++  YP 
Sbjct: 194 NRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242


>gi|329297085|ref|ZP_08254421.1| outer membrane biogenesis protein BamD [Plautia stali symbiont]
          Length = 246

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 57/251 (22%), Positives = 103/251 (41%), Gaps = 18/251 (7%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
             ++         S+++  LVG    S      D V D     E+Y  A   L++ NF  
Sbjct: 1   MTRMKHLVAAATLSLSLA-LVGCSGSS------DPVPD-SPPSEIYATAQQKLQDGNFKA 52

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A +        +PF   +++  L   +  Y       A +    ++   P   N+DYV Y
Sbjct: 53  AIKQLEALDNRYPFGPYSQQVQLDLIYAYYKNTDLPLAQAAISRFMRLNPTHPNIDYVIY 112

Query: 136 LVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           + G++   +          I     D    +   +  S+++  Y N  Y   A+  +T  
Sbjct: 113 MKGLTDMALDDSALQDFFGIDRSDRDPTHARDAFRDFSQLLRGYPNCQYAADAQKRLTFL 172

Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
           ++ LA  E+ + ++Y KRG YVA + R + ++ +Y D +   +A+  +  AY  L L  E
Sbjct: 173 KDSLAKYELSVAQFYTKRGAYVAVVNRVEGMMRDYPDTQATRDALPLMENAYRQLQLTTE 232

Query: 246 AREVVSLIQER 256
           A +V  +I   
Sbjct: 233 ADKVAKIIAAN 243


>gi|330966363|gb|EGH66623.1| competence lipoprotein ComL [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 340

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 14/229 (6%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
            SS++V  +++++V    E+Y++A   L   +++ A E        +PF   A ++ L  
Sbjct: 18  CSSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLEL 73

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPY 150
            +  Y  G+ + A S  E +I  +P+  NVDY YY+ G++                    
Sbjct: 74  IYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKR 133

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
           D  A +      +++  RY NS Y   A+  +   RN LA+ E+ +  YYL R  YVAA 
Sbjct: 134 DPGAARDSFNEFAQLTSRYPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAA 193

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            R + V+ N+ +     + +A +VE+Y  L L D A   + +++  YP 
Sbjct: 194 NRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242


>gi|330878988|gb|EGH13137.1| competence lipoprotein ComL [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 340

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 14/229 (6%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
            SS++V  +++++V    E+Y++A   L   +++ A E        +PF   A ++ L  
Sbjct: 18  CSSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLEL 73

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPY 150
            +  Y  G+ + A S  E +I  +P+  NVDY YY+ G++                    
Sbjct: 74  IYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKR 133

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
           D  A +      +++  RY NS Y   A+  +   RN LA+ E+ +  YYL R  YVAA 
Sbjct: 134 DPGAARDSFNEFAQLTSRYPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAA 193

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            R + V+ N+ +     + +A +VE+Y  L L D A   + +++  YP 
Sbjct: 194 NRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242


>gi|300691370|ref|YP_003752365.1| lipoprotein, ComL family, tetratricopeptide repeats (TPR) domain
           [Ralstonia solanacearum PSI07]
 gi|299078430|emb|CBJ51082.1| putative lipoprotein, ComL family, tetratricopeptide repeats (TPR)
           domain [Ralstonia solanacearum PSI07]
          Length = 277

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 58/251 (23%), Positives = 107/251 (42%), Gaps = 14/251 (5%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           +    +   +A   +        +       T      ++Y +A   L   ++SKA +Y+
Sbjct: 14  RIGAVMAAGVACLAISACGIMPEQQDE----TAGWSANKLYSEAKDALDGGDYSKAVKYY 69

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
            +    +PF   A+++ + +A+  Y  G+   A +  + +I  +P   +VDY YYL G+ 
Sbjct: 70  EKLESRYPFGPFAQQAQIETAYANYKDGETAAALAAVDRFIQLHPNHPSVDYAYYLKGLI 129

Query: 141 YAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
                               D +A +        ++ R+ NS Y   A   +    N +A
Sbjct: 130 NFNDNLGWLGRFSNQDLSERDPKAARAAYDAFKTLITRFPNSKYTPDAAQRMQYIVNAMA 189

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
             EV+  RYY +RG Y+AA  R Q  + +Y  A   EEA+  ++++Y AL + D   +  
Sbjct: 190 DHEVQAARYYYRRGAYLAATNRAQEAIKDYDRAPAVEEALYIMMKSYEALGMKDLHDDTE 249

Query: 251 SLIQERYPQGY 261
            +I++ YP   
Sbjct: 250 RIIKQNYPNSD 260


>gi|110806534|ref|YP_690054.1| outer membrane protein assembly complex subunit YfiO [Shigella
           flexneri 5 str. 8401]
 gi|110616082|gb|ABF04749.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
          Length = 245

 Score =  265 bits (679), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 99/248 (39%), Gaps = 17/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +    FL G     S++   D+        E+Y  A   L++ N+ +A  
Sbjct: 1   MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWRQAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y       A +  + +I   P   N+DYV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   +                D +  +      S++V  Y NS Y   A   +   + +
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKGR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E  +  YY +RG +VA + R + +L +Y D +   +A+  +  AY  + +  +A +
Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEK 233

Query: 249 VVSLIQER 256
           V  +I   
Sbjct: 234 VAKIIAAN 241


>gi|188582377|ref|YP_001925822.1| lipoprotein [Methylobacterium populi BJ001]
 gi|179345875|gb|ACB81287.1| putative lipoprotein [Methylobacterium populi BJ001]
          Length = 291

 Score =  265 bits (679), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 71/227 (31%), Positives = 127/227 (55%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           + Y           ++Y + +  ++++++  A + F Q  + + ++  +RK LLM+A+  
Sbjct: 36  EKYKPEAVPDTPADKLYSEGLAKMEDKDYENAAKQFEQLDKQYTYSDWSRKGLLMTAYAN 95

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y   KY  A +  + Y+ ++P SK+  Y  YL+ MS  + I DV  DQ  ++  L  +  
Sbjct: 96  YEGAKYDDAINASKRYLQRHPASKDAAYAQYLMAMSQYKQIPDVTRDQERSERALVALQE 155

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V++Y  S Y   A+  + + R+QLA KE+ +GR+YL++  + AAI RF+ V++ Y    
Sbjct: 156 LVQKYPTSEYAADAKAKIQITRDQLAGKEMAVGRFYLEKRAFPAAINRFRDVVSKYQTTR 215

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           HAEEA+ RLVEAY+AL L  EA+   +++   +P   W +    L++
Sbjct: 216 HAEEALERLVEAYMALGLTAEAQTAAAVLGHNFPDSPWYQDAYKLLQ 262


>gi|119387190|ref|YP_918245.1| putative ComL lipoprotein [Paracoccus denitrificans PD1222]
 gi|119377785|gb|ABL72549.1| putative ComL lipoprotein [Paracoccus denitrificans PD1222]
          Length = 280

 Score =  265 bits (679), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 71/248 (28%), Positives = 128/248 (51%), Gaps = 4/248 (1%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL-KEQNFSKAYEYFNQC 83
            +   +++  L G    + +        +     E+Y++    L   +    A +YF + 
Sbjct: 9   LVAAVLSLGLLAGCSGGAGKK---PESFENFTAEEIYKRGEYELENSRRPKDAVQYFTEV 65

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
            R +P++  A+++L+M A+  + A  Y++A    + +I  YP  ++  Y  YL+ +SY  
Sbjct: 66  ERLYPYSEWAKRALIMQAYSYHRARDYEEARGAAQRFIDTYPGDEDAAYAKYLLALSYYD 125

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
            I ++  DQ  T   LQ +  ++E+Y ++ Y + A     +  + LAAKE+EIGRYYLKR
Sbjct: 126 QIDEIGRDQGLTFQALQSLREVIEQYPDTEYARSAILKFDLAFDHLAAKEMEIGRYYLKR 185

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
           G Y AAI RF++V+  +    H  EA+ RL EAY+AL L DEA+   +++   +    + 
Sbjct: 186 GHYTAAINRFRVVVEEFQTTSHTPEALMRLTEAYLALGLNDEAQTAGAILGHNFQSSPFY 245

Query: 264 RYVETLVK 271
           +     ++
Sbjct: 246 QDAFAQLR 253


>gi|149184730|ref|ZP_01863048.1| DNA uptake lipoprotein [Erythrobacter sp. SD-21]
 gi|148832050|gb|EDL50483.1| DNA uptake lipoprotein [Erythrobacter sp. SD-21]
          Length = 266

 Score =  265 bits (679), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 75/230 (32%), Positives = 119/230 (51%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
               +   D+    R    +Y +A   L       A   F++  R  P++  AR++ LMS
Sbjct: 27  GGGSNRPEDTAYVARDVETLYSQAKQELDRGRPQLAAALFDEVERQHPYSPWARRAQLMS 86

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           AF  Y AG Y +  S  + +++ +P +K+  Y YYL+ +SY + I DV  DQ+ T+  L 
Sbjct: 87  AFSYYVAGDYNKTTSSAQRFLSIHPGNKDAPYAYYLIALSYYEQISDVQRDQKVTEQALT 146

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
            +  +  R+  S Y   AR  + +  + LA KE+EIGRYY + G+++AA  RFQ V+  Y
Sbjct: 147 ALREVNRRFPQSQYAADARLKIDLVEDHLAGKEMEIGRYYQRSGKWIAAQIRFQNVVETY 206

Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
               HA EA+ RLVE+ +AL +  EA +  +++   YP   W      L+
Sbjct: 207 QTTSHAPEALYRLVESSLALGIKPEAVKYAAVLGANYPGNEWYEKAYELI 256


>gi|319404502|emb|CBI78107.1| competence lipoprotein precursor [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 297

 Score =  265 bits (679), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 83/254 (32%), Positives = 129/254 (50%), Gaps = 2/254 (0%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDS-VTDVRYQREVYEKAVLFLKEQNFSKAY 77
           + K  + +      CFL G   +    +     V  +     +Y +A+  L     S+A 
Sbjct: 19  VRKVLIGVLLG-GTCFLAGCLGKGKNILDPSMHVLKIDPPDVLYNQALANLDVGRLSEAA 77

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           + F    + + +    RKSL+M AF  Y   KY  A S+ + YI+ YP + +  Y YY++
Sbjct: 78  KKFAIIEKQYAYTDWGRKSLIMGAFTNYRLAKYDDAISMAQHYISLYPLADDSAYAYYII 137

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
           G+S  + I DV  DQ+ TK  +  M  ++ERY  S YV  A+  +  GR QLA KE++IG
Sbjct: 138 GLSSFRRIPDVTRDQQDTKRAIAAMQVLIERYPESEYVSDAKAKIRFGREQLAGKEMQIG 197

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           RYY +   Y+AA  RF+ V+  Y D    EEA+ RL E   AL L  EA+   +++   Y
Sbjct: 198 RYYEEGQRYLAASRRFRTVIEEYPDTNQIEEALFRLTEVNFALGLTMEAQTAAAILGRNY 257

Query: 258 PQGYWARYVETLVK 271
           P+  W ++   L++
Sbjct: 258 PESKWYKFSYDLLQ 271


>gi|294142198|ref|YP_003558176.1| hypothetical protein SVI_3427 [Shewanella violacea DSS12]
 gi|293328667|dbj|BAJ03398.1| conserved hypothetical protein [Shewanella violacea DSS12]
          Length = 253

 Score =  265 bits (678), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 51/253 (20%), Positives = 94/253 (37%), Gaps = 14/253 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           ++KFA     ++    +         ++             +Y +A   ++  N+SKA  
Sbjct: 1   MHKFAKGAVLALFSIAITACSSSPDEELKASK----TSPDVLYSQARTSMELGNYSKAVR 56

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF     +  L   +  Y         +  + +I   P  K++DYVYY+ G
Sbjct: 57  SLEALDSRYPFGPHKTQVQLDLIYAYYKLDDPASGIANIDRFIRLNPTHKDIDYVYYMRG 116

Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +   Q           I     D +      +   R+++ Y NS Y   A   +   +N+
Sbjct: 117 LVNMQSDSYMFHDMLNIDRTDRDPQVAINAFKDFDRLIKSYPNSKYANDAAERMQYLKNR 176

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA   + +  YY+K   + AA  R Q V+  Y      E A+  + +AY  L        
Sbjct: 177 LAKYSINVAEYYMKMNAWSAAAIRAQSVMETYPGTSSTERALEIMADAYGELGQEKLKNN 236

Query: 249 VVSLIQERYPQGY 261
           V+++++  YP   
Sbjct: 237 VLTVMKANYPDNK 249


>gi|322614487|gb|EFY11418.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315996572]
 gi|322621448|gb|EFY18301.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-1]
 gi|322624309|gb|EFY21142.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-3]
 gi|322629392|gb|EFY26170.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-4]
 gi|322633632|gb|EFY30374.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-1]
 gi|322638325|gb|EFY35023.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-2]
 gi|322639763|gb|EFY36446.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str. 531954]
 gi|322647375|gb|EFY43871.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322650455|gb|EFY46865.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           OH_2009072675]
 gi|322661446|gb|EFY57671.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str. 19N]
 gi|322662646|gb|EFY58854.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           81038-01]
 gi|322667019|gb|EFY63194.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MD_MDA09249507]
 gi|322671388|gb|EFY67511.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str. 414877]
 gi|322677605|gb|EFY73668.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str. 366867]
 gi|322681569|gb|EFY77599.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str. 413180]
 gi|322683969|gb|EFY79979.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str. 446600]
 gi|323195538|gb|EFZ80716.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           609458-1]
 gi|323197911|gb|EFZ83034.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           556150-1]
 gi|323203089|gb|EFZ88121.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str. 609460]
 gi|323205330|gb|EFZ90305.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           507440-20]
 gi|323210520|gb|EFZ95404.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str. 556152]
 gi|323218199|gb|EGA02911.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB101509-0077]
 gi|323221535|gb|EGA05948.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB102109-0047]
 gi|323223755|gb|EGA08060.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB110209-0055]
 gi|323230962|gb|EGA15080.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB111609-0052]
 gi|323234686|gb|EGA18772.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009083312]
 gi|323238725|gb|EGA22775.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009085258]
 gi|323241424|gb|EGA25455.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315731156]
 gi|323246878|gb|EGA30845.1| outer membrane biogenesis protein BamD [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323253277|gb|EGA37107.1| outer membrane biogenesis protein BamD [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323257073|gb|EGA40782.1| outer membrane biogenesis protein BamD [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323260454|gb|EGA44065.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008284]
 gi|323264489|gb|EGA47995.1| outer membrane biogenesis protein BamD [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323269624|gb|EGA53077.1| outer membrane biogenesis protein BamD [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
          Length = 245

 Score =  265 bits (677), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 52/252 (20%), Positives = 99/252 (39%), Gaps = 17/252 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +    FL G     S++   D+        E+Y  A   L++ N+ +A  
Sbjct: 1   MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWKQAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y       A +  + ++   P   N+DYV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVMYMRG 113

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   +                D +  +      S++V  Y NS Y   A   +   +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVRSYPNSQYTTDATKRLVFLKDR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E  +  YY  RG +VA + R + +L NY D +   +A+  +  AY  + L  +A +
Sbjct: 174 LAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATRDALPLMENAYRQMQLNAQADK 233

Query: 249 VVSLIQERYPQG 260
           V  +I       
Sbjct: 234 VAKIIASNSKNT 245


>gi|163852368|ref|YP_001640411.1| putative lipoprotein [Methylobacterium extorquens PA1]
 gi|163663973|gb|ABY31340.1| putative lipoprotein [Methylobacterium extorquens PA1]
          Length = 291

 Score =  265 bits (677), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 72/227 (31%), Positives = 129/227 (56%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           + Y           ++Y + +  ++++++  A + F+Q  + + ++  +RK LLM+A+  
Sbjct: 36  EKYKPEAIPDTPADKLYSEGLAKMEDRDYENAAKQFDQLDKQYTYSDWSRKGLLMTAYAN 95

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y   KY  A +  + Y+ ++P SK+  Y  YL+ MS  + I DV  DQ  ++  L  +  
Sbjct: 96  YEGAKYDDAINASKRYLQRHPASKDAAYAQYLMAMSQYKQIPDVTRDQERSERALIALQE 155

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V++Y  S Y   A+  + + R+QLA KE+E+GR+YL++  + AAI RF+ V++ Y    
Sbjct: 156 LVQKYPTSEYAADAKAKIQITRDQLAGKEMEVGRFYLEKRAFPAAINRFRDVVSKYQTTR 215

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           HAEEA+ RLVEAY+AL L  EA+   +++   +P   W +    L++
Sbjct: 216 HAEEALERLVEAYMALGLTGEAQTAAAVLGHNFPDSPWYQDAYKLLQ 262


>gi|237729510|ref|ZP_04559991.1| outer membrane protein assembly complex subunit YfiO [Citrobacter
           sp. 30_2]
 gi|226908116|gb|EEH94034.1| outer membrane protein assembly complex subunit YfiO [Citrobacter
           sp. 30_2]
          Length = 245

 Score =  265 bits (677), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 98/248 (39%), Gaps = 17/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +    FL G     S++   D+        E+Y  A   L++ N+ +A  
Sbjct: 1   MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWKQAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y       A +  + +I   P   N+DYV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   +                D +  +      S++V  Y NS Y   A   +   +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVRGYPNSQYTTDATKRLVFLKDR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E  +  YY  RG +VA + R + +L +Y D +    A+  +  AY  + +  +A +
Sbjct: 174 LAKYEYSVAEYYTARGAWVAVVNRVEGMLRDYPDTQATRNALPLMENAYRQMQMNAQAEK 233

Query: 249 VVSLIQER 256
           V  +I   
Sbjct: 234 VAKIIAAN 241


>gi|322656052|gb|EFY52352.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
          Length = 245

 Score =  265 bits (677), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 52/248 (20%), Positives = 99/248 (39%), Gaps = 17/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +    FL G     S++   D+        E+Y  A   L++ N+ +A  
Sbjct: 1   MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWKQAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y       A +  + ++   P   N+DYV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVMYMRG 113

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   +                D +  +      S++V  Y NS Y   A   +   +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVRSYPNSQYTTDATKRLVFLKDR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E  +  YY  RG +VA + R + +L NY D +   +A+  +  AY  + L  +A +
Sbjct: 174 LAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATRDALPLMENAYRQMQLNAQADK 233

Query: 249 VVSLIQER 256
           V  +I   
Sbjct: 234 VAKIIASN 241


>gi|16765979|ref|NP_461594.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|56414630|ref|YP_151705.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Paratyphi A str. ATCC
           9150]
 gi|161502238|ref|YP_001569350.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. arizonae serovar 62:z4,z23:-- str.
           RSK2980]
 gi|161615593|ref|YP_001589558.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Paratyphi B str. SPB7]
 gi|167553893|ref|ZP_02347636.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
 gi|167992441|ref|ZP_02573539.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168234183|ref|ZP_02659241.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|168244684|ref|ZP_02669616.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
 gi|168262166|ref|ZP_02684139.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|168464165|ref|ZP_02698082.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Newport str. SL317]
 gi|168822473|ref|ZP_02834473.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|194444235|ref|YP_002041927.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194448106|ref|YP_002046669.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194472505|ref|ZP_03078489.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Kentucky str. CVM29188]
 gi|197248037|ref|YP_002147566.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|197263157|ref|ZP_03163231.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|197363557|ref|YP_002143194.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Paratyphi A str.
           AKU_12601]
 gi|198241761|ref|YP_002216674.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|200388577|ref|ZP_03215189.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
 gi|204929736|ref|ZP_03220810.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|205353702|ref|YP_002227503.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|207858013|ref|YP_002244664.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|224584516|ref|YP_002638314.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
 gi|16421210|gb|AAL21553.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|56128887|gb|AAV78393.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|160863585|gb|ABX20208.1| hypothetical protein SARI_00263 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
 gi|161364957|gb|ABX68725.1| hypothetical protein SPAB_03374 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194402898|gb|ACF63120.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194406410|gb|ACF66629.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|194458869|gb|EDX47708.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Kentucky str. CVM29188]
 gi|195633350|gb|EDX51764.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Newport str. SL317]
 gi|197095034|emb|CAR60580.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|197211740|gb|ACH49137.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|197241412|gb|EDY24032.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|197936277|gb|ACH73610.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|199605675|gb|EDZ04220.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
 gi|204321455|gb|EDZ06655.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|205273483|emb|CAR38460.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|205321763|gb|EDZ09602.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
 gi|205329289|gb|EDZ16053.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205331816|gb|EDZ18580.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|205336453|gb|EDZ23217.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
 gi|205341181|gb|EDZ27945.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|205349291|gb|EDZ35922.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|206709816|emb|CAR34168.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|224469043|gb|ACN46873.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|261247857|emb|CBG25686.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
           Typhimurium str. D23580]
 gi|267994804|gb|ACY89689.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           14028S]
 gi|301159210|emb|CBW18725.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
           Typhimurium str. SL1344]
 gi|312913653|dbj|BAJ37627.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           T000240]
 gi|320087096|emb|CBY96864.1| UPF0169 lipoprotein CC_1984 Flags: Precursor [Salmonella enterica
           subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321223455|gb|EFX48520.1| putative component of the lipoprotein assembly complex forms a
           complex with YaeT, YfgL, and NlpB [Salmonella enterica
           subsp. enterica serovar Typhimurium str. TN061786]
 gi|323130997|gb|ADX18427.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Typhimurium str. 4/74]
 gi|326624430|gb|EGE30775.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Dublin str. 3246]
 gi|326628808|gb|EGE35151.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 9]
 gi|332989588|gb|AEF08571.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Typhimurium str. UK-1]
          Length = 245

 Score =  265 bits (677), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 52/252 (20%), Positives = 99/252 (39%), Gaps = 17/252 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +    FL G     S++   D+        E+Y  A   L++ N+ +A  
Sbjct: 1   MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWKQAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y       A +  + ++   P   N+DYV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVMYMRG 113

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   +                D +  +      S++V  Y NS Y   A   +   +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVRSYPNSQYTTDATKRLVFLKDR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E  +  YY  RG +VA + R + +L NY D +   +A+  +  AY  + L  +A +
Sbjct: 174 LAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATRDALPLMENAYRQMQLNAQADK 233

Query: 249 VVSLIQERYPQG 260
           V  +I       
Sbjct: 234 VAKIIAANSKNT 245


>gi|289824163|ref|ZP_06543758.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-3139]
          Length = 269

 Score =  265 bits (677), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 53/248 (21%), Positives = 100/248 (40%), Gaps = 17/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +    FL G     S++   D+        E+Y  A   L++ N+ +A  
Sbjct: 1   MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWKQAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y       A +  + ++   P   N+DYV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVMYMRG 113

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   +   V            D +  +      S++V  Y NS Y   A   +   +++
Sbjct: 114 LTNMALDDSVLQGFFGVDRSDRDPQHARAAFNDFSKLVRSYPNSQYTTDATKRLVFLKDR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E  +  YY  RG +VA + R + +L NY D +   +A+  +  AY  + L  +A +
Sbjct: 174 LAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATRDALPLMENAYRQMQLNAQADK 233

Query: 249 VVSLIQER 256
           V  +I   
Sbjct: 234 VAKIIAAN 241


>gi|89093552|ref|ZP_01166500.1| competence lipoprotein ComL, putative [Oceanospirillum sp. MED92]
 gi|89082242|gb|EAR61466.1| competence lipoprotein ComL, putative [Oceanospirillum sp. MED92]
          Length = 307

 Score =  265 bits (677), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 57/252 (22%), Positives = 112/252 (44%), Gaps = 15/252 (5%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           +   ++  ++                Y D       ++++Y++A+  ++E N+  A E  
Sbjct: 2   RITKSLIVALFCLMTAACSWFEDLQEYPDVP-----EQQLYQEAMKAMEEVNYDLAIEKL 56

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
                 +PF   + ++ L   +  +   + + A +  + +I  +P   N+DY YYL G++
Sbjct: 57  QLLEARYPFGRFSEQTQLELIYAYFKNYEPEAARAAADRFIRLHPNHDNIDYAYYLKGLT 116

Query: 141 YAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
             +           I +   D  A     +  S +V RY  S Y   +   +   +N+LA
Sbjct: 117 AFEQDISWITQYLPIDETQRDPGAALDSFESFSTLVNRYPESQYAPDSYKRMVYLKNRLA 176

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
           A EV + RYY++R  +VAA  R + V+ N  +     +A+A ++EAY  L   D A +  
Sbjct: 177 AYEVHVARYYIQREAFVAAANRGRYVIENMQETPAVPDALAVMIEAYTHLGQQDLAADTQ 236

Query: 251 SLIQERYPQGYW 262
           S++ + YP+  +
Sbjct: 237 SVLSQNYPEYQY 248


>gi|149914537|ref|ZP_01903067.1| competence lipoprotein ComL, putative [Roseobacter sp. AzwK-3b]
 gi|149811330|gb|EDM71165.1| competence lipoprotein ComL, putative [Roseobacter sp. AzwK-3b]
          Length = 282

 Score =  265 bits (677), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 75/248 (30%), Positives = 130/248 (52%), Gaps = 1/248 (0%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           A  +   +    L G   ++SR    +   +     +++E+A   L   +   A E F +
Sbjct: 8   ATLVGAIVVGLGLAGCS-ENSRVERGEVDFENYTAEQIFERAEYDLSRNDPDLAAEVFGE 66

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
             R +P++  A+++L+M AF  + A  Y+ + +  + +I  YP  ++  Y  YL+ +SY 
Sbjct: 67  VERLYPYSEWAKRALIMQAFSYHQAEDYENSRASAQRFIDFYPTDEDAAYAQYLLALSYY 126

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
             I +V  DQ  T   LQ +  ++ER+ +S Y + +     +  + LAAKE+EIGRYYL+
Sbjct: 127 DQIDEVGRDQGLTFQALQSLREVIERHPDSEYAQSSVLKFDLAFDHLAAKEMEIGRYYLR 186

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
              + AAI RF++V+ ++    H  EA+ RLVEAY++L L DEAR   +++   +    W
Sbjct: 187 GDHFSAAINRFRVVVEDFQTTSHTAEALHRLVEAYLSLGLTDEARTAGAILGYNFRGTQW 246

Query: 263 ARYVETLV 270
                TL+
Sbjct: 247 YEDSYTLL 254


>gi|89901093|ref|YP_523564.1| hypothetical protein Rfer_2315 [Rhodoferax ferrireducens T118]
 gi|89345830|gb|ABD70033.1| putative transmembrane protein [Rhodoferax ferrireducens T118]
          Length = 268

 Score =  265 bits (677), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 67/252 (26%), Positives = 113/252 (44%), Gaps = 14/252 (5%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           K ++   +S+A   L+     S+        T      ++Y +A   L    + KA   F
Sbjct: 5   KLSVVCAWSLAGAVLLLPGCSST----PPDQTADWSPNKIYAEAKDELSSGGYDKAVVLF 60

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
            +         +A+++ L  A+ QY +G+  QA +  + ++  +P S  +DY  YL G+ 
Sbjct: 61  EKLEGRAAGTPLAQQAQLDKAYAQYKSGESAQALATLDRFMKLHPASPALDYALYLKGII 120

Query: 141 YAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
                  +            DQ+A+K   +    +V R+  S Y   AR  +T   N LA
Sbjct: 121 NFNDDLGLFSAVTRQDLAERDQKASKESFESFKELVTRFPESRYTPDARQRMTYIVNSLA 180

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
             EV + RYY  RG YVAAI R Q+ + +Y      EEA+  +V++Y AL L     +  
Sbjct: 181 QYEVHVARYYYGRGAYVAAINRAQVAVTDYQGVPAVEEALFIIVKSYDALGLTQLRDDAK 240

Query: 251 SLIQERYPQGYW 262
            ++++ YPQ  +
Sbjct: 241 RVLEKNYPQTEY 252


>gi|213646597|ref|ZP_03376650.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Typhi str. J185]
          Length = 270

 Score =  264 bits (676), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 53/248 (21%), Positives = 100/248 (40%), Gaps = 17/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +    FL G     S++   D+        E+Y  A   L++ N+ +A  
Sbjct: 1   MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWKQAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y       A +  + ++   P   N+DYV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVMYMRG 113

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   +   V            D +  +      S++V  Y NS Y   A   +   +++
Sbjct: 114 LTNMALDDSVLQGFFGVDRSDRDPQHARAAFNDFSKLVRSYPNSQYTTDATKRLVFLKDR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E  +  YY  RG +VA + R + +L NY D +   +A+  +  AY  + L  +A +
Sbjct: 174 LAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATRDALPLMENAYRQMQLNAQADK 233

Query: 249 VVSLIQER 256
           V  +I   
Sbjct: 234 VAKIIAAN 241


>gi|117923624|ref|YP_864241.1| DNA uptake lipoprotein-like protein [Magnetococcus sp. MC-1]
 gi|117607380|gb|ABK42835.1| DNA uptake lipoprotein-like protein [Magnetococcus sp. MC-1]
          Length = 302

 Score =  264 bits (676), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 63/254 (24%), Positives = 120/254 (47%), Gaps = 10/254 (3%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +  + +   +    L G      +DV  D   +V     +Y  AV  ++++N+  A  
Sbjct: 9   MKRLCMMVMLVL---LLSGCSSTEEKDVQPDLAPEV-----MYRMAVNHVQKKNYKSAAT 60

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            F    +  PF+  A ++ L   F  Y   ++ +A    + +I  +P    V Y +Y++G
Sbjct: 61  IFTDLDQKHPFSPWAVRAQLNLIFATYKQDEFDEAVGHAKRFIRLHPRHPEVSYAFYMIG 120

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           +++ + I+D   DQ  TK        ++ R+  S Y   A+  +   RN++A +E+ +GR
Sbjct: 121 LAHYRQIKDPYRDQARTKEAATAFHEVINRFGESDYAWEAQKMLDFCRNRMAQQEIVVGR 180

Query: 199 YYLKRGEYVAAIPRFQLVLAN--YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           YY  RGEY+AA+ RF  ++ N  + D+   EEA+  +V + + L L  EA+    ++   
Sbjct: 181 YYFDRGEYIAAMKRFNEIVDNPEFRDSLQTEEALFSMVLSALKLGLEQEAKNYAVVLGHN 240

Query: 257 YPQGYWARYVETLV 270
           Y  G      + ++
Sbjct: 241 YKDGRLYAVAKDIL 254


>gi|83942732|ref|ZP_00955193.1| competence lipoprotein ComL, putative [Sulfitobacter sp. EE-36]
 gi|83953972|ref|ZP_00962693.1| competence lipoprotein ComL, putative [Sulfitobacter sp. NAS-14.1]
 gi|83841917|gb|EAP81086.1| competence lipoprotein ComL, putative [Sulfitobacter sp. NAS-14.1]
 gi|83846825|gb|EAP84701.1| competence lipoprotein ComL, putative [Sulfitobacter sp. EE-36]
          Length = 290

 Score =  264 bits (676), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 72/250 (28%), Positives = 129/250 (51%), Gaps = 2/250 (0%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDS--VTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           A+ +   +  C       +++   +       +     ++YE+    L  +  ++A EYF
Sbjct: 13  AVLLAGVLGACGGAQDTGRTTNSFFNPQEIPLETYSAEQIYERGEFELNRKRPAEAAEYF 72

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
           ++  R +P++  A+++L+M AF  +    Y  + S  + YI  +P+  +  Y  YL+ +S
Sbjct: 73  SEIERLYPYSEWAKRALIMQAFAYHQDQDYPNSRSAAQRYIDFFPDDDDASYASYLLALS 132

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
           Y   I +V  DQ  T   LQ + R++E Y +S Y + +     +  + LA KE+E+GRYY
Sbjct: 133 YYDQIDEVGRDQGLTFQALQALRRVIEDYPDSEYARSSVLKFDLAFDHLAGKEMEVGRYY 192

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           L+R  Y A+I RF++V+ ++    H  EA+ RLVEAY++L L DEA+   +++   Y   
Sbjct: 193 LRRKHYTASINRFRVVVEDFQTTTHTAEALHRLVEAYLSLGLTDEAQTAGAILGHNYQST 252

Query: 261 YWARYVETLV 270
            W      L+
Sbjct: 253 EWYEASYKLL 262


>gi|238921073|ref|YP_002934588.1| outer membrane protein assembly complex subunit YfiO [Edwardsiella
           ictaluri 93-146]
 gi|238870642|gb|ACR70353.1| competence lipoprotein ComL [Edwardsiella ictaluri 93-146]
          Length = 245

 Score =  264 bits (676), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 63/244 (25%), Positives = 106/244 (43%), Gaps = 22/244 (9%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           A T+  ++A C        SS++   D+        E+Y  A   L++ NF  A      
Sbjct: 10  ATTLSLALAGC-------SSSKEAVPDNPP-----AEIYATAQQKLQDGNFKAAITQLEA 57

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
               +PF   +++  L   +  Y +     A +  + +I   P S+N+ YV Y+ G++  
Sbjct: 58  LDNRYPFGPYSQQVQLDLIYAYYKSADLPMAQATIDRFIRLNPTSQNMSYVLYMRGLTDM 117

Query: 143 QM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
            M          I     D    +   +  S++V+RY NS Y   A   +   +N+LA  
Sbjct: 118 AMDDSALQGFFGIDRSDRDPEYARQAFRDFSQLVQRYPNSAYTTDATKRLVFLKNRLAKH 177

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           E+ + R+Y KRG YVA + R + +L NY D +    A+  +  AY  + L  EA +V  +
Sbjct: 178 ELAVARFYTKRGAYVAVVNRVEQMLRNYPDTQATRGALPLMENAYRQMGLNGEADKVQKI 237

Query: 253 IQER 256
           I   
Sbjct: 238 IAFN 241


>gi|330811804|ref|YP_004356266.1| DNA uptake lipoprotein (ComL) [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327379912|gb|AEA71262.1| Putative DNA uptake lipoprotein (ComL) [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 338

 Score =  264 bits (676), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 59/229 (25%), Positives = 105/229 (45%), Gaps = 14/229 (6%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
            SS++V  +++++V    E+Y++A   L   +++ A          +PF   A ++ L  
Sbjct: 18  CSSKEVVDENLSEV----ELYQQAQNDLDNNSYTSATAKLKALESRYPFGRYADQAQLEL 73

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PY 150
            +  Y   + + A S  E +I  +P+  NVDY YYL G++       +            
Sbjct: 74  IYANYKNAEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQDVGLLARFLPLDMTKR 133

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
           D  A +      +++  R+ NS Y   A+  +   RN LA+ E+ +  YYL R  YVAA 
Sbjct: 134 DPGAARDSYNEFAQLTSRFPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAA 193

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            R + V+ N+ +     + +A + EAY  L L + A   +  ++  YP 
Sbjct: 194 NRGRYVVENFQETPSVGDGLAVMTEAYQRLHLDELAATSLETLKLNYPD 242


>gi|218531128|ref|YP_002421944.1| outer membrane assembly lipoprotein YfiO [Methylobacterium
           chloromethanicum CM4]
 gi|254562116|ref|YP_003069211.1| lipoprotein UPF0169; exported protein [Methylobacterium extorquens
           DM4]
 gi|218523431|gb|ACK84016.1| outer membrane assembly lipoprotein YfiO [Methylobacterium
           chloromethanicum CM4]
 gi|254269394|emb|CAX25360.1| putative lipoprotein UPF0169; putative exported protein
           [Methylobacterium extorquens DM4]
          Length = 291

 Score =  264 bits (676), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 72/227 (31%), Positives = 129/227 (56%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           + Y           ++Y + +  ++++++  A + F+Q  + + ++  +RK LLM+A+  
Sbjct: 36  EKYKPEAIPDTPADKLYSEGLAKMEDRDYENAAKQFDQLDKQYTYSDWSRKGLLMTAYAN 95

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y   KY  A +  + Y+ ++P SK+  Y  YL+ MS  + I DV  DQ  ++  L  +  
Sbjct: 96  YEGAKYDDAINASKRYLQRHPASKDAAYAQYLMAMSQYKQIPDVTRDQERSERALIALQE 155

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V++Y  S Y   A+  + + R+QLA KE+E+GR+YL++  + AAI RF+ V++ Y    
Sbjct: 156 LVQKYPTSEYAADAKAKIQITRDQLAGKEMEVGRFYLEKRAFPAAINRFRDVVSKYQTTR 215

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           HAEEA+ RLVEAY+AL L  EA+   +++   +P   W +    L++
Sbjct: 216 HAEEALERLVEAYMALGLTGEAQTAAAVLGHNFPDSPWYQDAYKLLQ 262


>gi|293448947|ref|ZP_06663368.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli B088]
 gi|291322037|gb|EFE61466.1| outer membrane protein assembly complex subunit YfiO [Escherichia
           coli B088]
          Length = 245

 Score =  264 bits (676), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 99/248 (39%), Gaps = 17/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +    FL G     S++   D+        E+Y  A   L++ N+ +A  
Sbjct: 1   MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWRQAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y       A +  + +I   P   N+DYV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   +                D +  +      S++   Y NS Y   A   +   +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLARGYPNSQYTTDATKRLVFLKDR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E  +  YY +RG +VA + R + +L +Y D +   +A+  +  AY  + +  +A +
Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEK 233

Query: 249 VVSLIQER 256
           V  +I   
Sbjct: 234 VAKIIAAN 241


>gi|229588325|ref|YP_002870444.1| putative lipoprotein [Pseudomonas fluorescens SBW25]
 gi|229360191|emb|CAY47048.1| putative lipoprotein [Pseudomonas fluorescens SBW25]
          Length = 341

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 57/244 (23%), Positives = 99/244 (40%), Gaps = 16/244 (6%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           +     +                D V +   + E+Y+ A   L   +++ A         
Sbjct: 6   LLLIAILAMTAACSSTK------DVVDENLSEVELYQLAQKDLDNNSYTSATAKLKALES 59

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
            +PF   A ++ L   +  Y   + + A S  E +I  +P+  NVDY YY+ G++     
Sbjct: 60  RYPFGRYADQAQLELIYANYKNAEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQD 119

Query: 146 RDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
             +            D  A +      +++  RY NS Y   A+  +   RN LA+ E+ 
Sbjct: 120 VGLLARFLPLDMTKRDPGAARDSYNEFAQLTSRYPNSRYAPDAKQRMIYLRNLLASYEIH 179

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           +  YYL R  YVAA  R + V+ N+ +     + +A + EAY  L L + A   +  ++ 
Sbjct: 180 VAHYYLTRQAYVAAANRGRYVVENFQETPSVGDGLAVMTEAYQRLHLDELASTSLETLKL 239

Query: 256 RYPQ 259
            YP 
Sbjct: 240 NYPD 243


>gi|326387607|ref|ZP_08209213.1| DNA uptake lipoprotein [Novosphingobium nitrogenifigens DSM 19370]
 gi|326207653|gb|EGD58464.1| DNA uptake lipoprotein [Novosphingobium nitrogenifigens DSM 19370]
          Length = 268

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 71/242 (29%), Positives = 126/242 (52%), Gaps = 5/242 (2%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
           SI +    G  +      Y+    D      +Y  A L L + +   A   F++  R  P
Sbjct: 22  SIGLAGCAGGNKTKKDVAYVARDVDT-----LYMAAKLRLDQGDAKAAAALFDEVERQHP 76

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
           ++  AR++ LMS+F  Y A  Y ++    + +++ +P +K+  Y YYLV + Y + I DV
Sbjct: 77  YSPWARRAQLMSSFSYYMARDYAKSIQAAQRFLSIHPGNKDAPYAYYLVALCYYERISDV 136

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
             DQ+ T+  LQ ++ ++ RY  + Y   A+  + +  + LA KE+E+GR+Y + G+++A
Sbjct: 137 TRDQKDTQQALQALNEVIRRYPATTYATDAKVKLDLVNDHLAGKEMEVGRFYERSGKWLA 196

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
              RF+ V+  Y    H  EA+ RLVE Y++L + +EA++  +++   YP   W      
Sbjct: 197 GTMRFRAVVDKYQQTSHTPEALYRLVECYLSLGIPEEAQKAAAVLGNNYPGNEWYERAFK 256

Query: 269 LV 270
           L+
Sbjct: 257 LM 258


>gi|62181236|ref|YP_217653.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|62128869|gb|AAX66572.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|322715722|gb|EFZ07293.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Choleraesuis str. A50]
          Length = 245

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 53/255 (20%), Positives = 98/255 (38%), Gaps = 20/255 (7%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
              +         S+   FL G     S++   D+        E+Y  A   L++ N+ +
Sbjct: 1   MTHMKYLVAAATLSL---FLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWKQ 50

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A          +PF   +++  L   +  Y       A +  + ++   P   N+DYV Y
Sbjct: 51  AITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVMY 110

Query: 136 LVGMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           + G++   +                D +  +      S++V  Y NS Y   A   +   
Sbjct: 111 MRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVRSYPNSQYTTDATKRLVFL 170

Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
           +++LA  E  +  YY  RG +VA + R + +L NY D +   +A+  +  AY  + L  +
Sbjct: 171 KDRLAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATRDALPLMENAYRQMQLNAQ 230

Query: 246 AREVVSLIQERYPQG 260
           A +V  +I       
Sbjct: 231 ADKVAKIIAANSKNT 245


>gi|254281628|ref|ZP_04956596.1| competence protein ComL [gamma proteobacterium NOR51-B]
 gi|219677831|gb|EED34180.1| competence protein ComL [gamma proteobacterium NOR51-B]
          Length = 307

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 61/258 (23%), Positives = 113/258 (43%), Gaps = 16/258 (6%)

Query: 13  EAWAYQLYK-FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ 71
            +   ++Y+   L    +  V  L         ++  DS      ++++Y +A  +L+  
Sbjct: 8   RSSVNKMYRTLTLGALTACVVAMLAACSGNDELEMAADSG-----EQQIYLEAQRYLEND 62

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           +F  A          +PF   A ++ L   F  Y   +++ A      +I  +P+  NVD
Sbjct: 63  SFDLAIRTLQMLESRYPFGRYAEQAQLELVFAHYGGREFEAAIEAANRFIRLHPQHPNVD 122

Query: 132 YVYYLVGMSYAQMI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
           Y YY+ G++   +            D   D    K  L   ++++ R+ +SPY   AR  
Sbjct: 123 YAYYMKGLAAYDIDGGFLASLVPTDDTKRDVGHMKEALAEFAQLLARFPDSPYAPDARLR 182

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
           +   RN LA  E+ +  YY +RG Y+AA+ R + V+ N        + +A + +AY+ L 
Sbjct: 183 MVHLRNMLARHEIHVANYYFRRGAYMAALNRGRYVVENLEQTPSVADGLAIMAQAYLLLG 242

Query: 242 LMDEAREVVSLIQERYPQ 259
           L D A + + +++  YP 
Sbjct: 243 LDDLAIDTIEVLKANYPN 260


>gi|241760147|ref|ZP_04758245.1| competence lipoprotein ComL [Neisseria flavescens SK114]
 gi|241319601|gb|EER56031.1| competence lipoprotein ComL [Neisseria flavescens SK114]
          Length = 267

 Score =  263 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 60/260 (23%), Positives = 112/260 (43%), Gaps = 14/260 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K  L +   +A+                  +T      ++Y +A   L   N+++A +
Sbjct: 1   MKKILLVVSLGLALSACANKGTIDKD----AQITQDWSVEKLYAEAQDELNSNNYTRAVK 56

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            +      FP    A++S L +A+  Y   + ++A +    +   +P+  N+DY  YL G
Sbjct: 57  LYEILESRFPNGRYAQQSQLDTAYAYYKDDEPEKALAAIARFQRHHPQHPNMDYALYLKG 116

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +      +              D +A +   Q  + +V+RY NS Y   A   +    + 
Sbjct: 117 LVLFNEDQSFLNKLASQDWSDRDPKANRDAYQAFAELVQRYPNSKYAADATERMAKLVDA 176

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           L   E+ + RYY+KRG YVAA+ R Q ++A Y +  + EEA+A +  AY  L     A +
Sbjct: 177 LGGNEMSVARYYMKRGAYVAAVNRAQKIVARYQNTRYVEEALAMMELAYKKLDKPQLAAD 236

Query: 249 VVSLIQERYPQGYWARYVET 268
              +++  +PQ  + ++   
Sbjct: 237 TRRVLETNFPQSPFLQHEWR 256


>gi|126740309|ref|ZP_01755997.1| competence lipoprotein ComL, putative [Roseobacter sp. SK209-2-6]
 gi|126718445|gb|EBA15159.1| competence lipoprotein ComL, putative [Roseobacter sp. SK209-2-6]
          Length = 283

 Score =  263 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 74/248 (29%), Positives = 122/248 (49%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           A  +  +I V  L G               +     +++E+    L       A  YF++
Sbjct: 8   AKFVGAAILVAALSGCGGDGGAGKERSIPLETYTPEQIFERGEFELARSRTKDAAYYFSE 67

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
             R +P++  A+++L+M AF  + +  Y+ +    + +I  YP  ++  Y  YL+ +SY 
Sbjct: 68  IERLYPYSEYAKQALIMQAFAYHQSKDYENSRGAAQRFIDFYPTDEDAAYAQYLLALSYY 127

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
             I +V  DQ  T   LQ +  ++E Y +S Y   A     +  + LA KE+EIGRYYL+
Sbjct: 128 DQIDEVGRDQGLTFQALQSLLTVIEVYPDSEYANAAILKFDLAFDHLAGKEMEIGRYYLR 187

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           RG + +AI RF++V+  Y    H  EA+ RLVEAY++L L DEA+   +++   Y    W
Sbjct: 188 RGHFTSAINRFRVVVEEYQTTTHTPEALHRLVEAYLSLGLTDEAQTAGAILGHNYQSSEW 247

Query: 263 ARYVETLV 270
                 L+
Sbjct: 248 YEDSYRLL 255


>gi|320326248|gb|EFW82302.1| competence lipoprotein ComL [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320330672|gb|EFW86649.1| competence lipoprotein ComL [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330881341|gb|EGH15490.1| competence lipoprotein ComL [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 340

 Score =  263 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 60/229 (26%), Positives = 108/229 (47%), Gaps = 14/229 (6%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
            SS++V  +++++V    E+Y++A   L   +++ A E        +PF   A ++ L  
Sbjct: 18  CSSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLEL 73

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPY 150
            +  Y  G+ + A S  E +I  +P+  NVDY YY+ G++                    
Sbjct: 74  IYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKR 133

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
           D  A +      +++  R+ NS Y   A+  +   R+ LA+ E+ +  YYL R  YVAA 
Sbjct: 134 DPGAARDSFNEFAQLTSRFPNSRYSPDAKQRMIYLRSLLASYEIHVADYYLTRQAYVAAA 193

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            R + V+ N+ +     + +A +VE+Y  L L D A   + +++  YP 
Sbjct: 194 NRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242


>gi|224825455|ref|ZP_03698560.1| outer membrane assembly lipoprotein YfiO [Lutiella nitroferrum
           2002]
 gi|224602376|gb|EEG08554.1| outer membrane assembly lipoprotein YfiO [Lutiella nitroferrum
           2002]
          Length = 256

 Score =  263 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 60/244 (24%), Positives = 103/244 (42%), Gaps = 15/244 (6%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
            +    L G       D      T      ++Y +A   L   N+++A + +      FP
Sbjct: 1   MLVALSLAGCASNEPYDE-----TRSWTVEKLYAEARDELNSGNYTRAVKLYETLEARFP 55

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
           +   A++S +  A+  Y   + + A +  + +I  +P   N+DYV YL G+ Y      +
Sbjct: 56  YGRYAQQSEMDLAYTHYKDNEPELAIAAADRFIKLHPTHPNLDYVLYLKGLVYYNDDSGL 115

Query: 149 ----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
                       D RAT+        +  R+ NS Y   A   +      L   E+ + R
Sbjct: 116 LAKWAGQDMSERDPRATREAFLAFRELTSRFPNSQYSADAAEKMNKLIKALGGHEMHVAR 175

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           YY+KRG Y+AA  R Q V+  Y++  + EEA+A  V AY  L +     +   +++  YP
Sbjct: 176 YYMKRGAYLAAAGRAQNVVKEYANTGYLEEALALTVTAYDKLGMPQLRDDARRVLELNYP 235

Query: 259 QGYW 262
           +  +
Sbjct: 236 KSQY 239


>gi|296285037|ref|ZP_06863035.1| DNA uptake lipoprotein [Citromicrobium bathyomarinum JL354]
          Length = 268

 Score =  263 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 82/256 (32%), Positives = 129/256 (50%), Gaps = 3/256 (1%)

Query: 19  LYKFALTIFFSIAV---CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
           +   A TI  ++A+     LV     S      D+    R    +Y  A   L   N   
Sbjct: 1   MTANAKTIAAALALGTIATLVSGCAGSGSGGPGDTAYVARDVETLYATAKQRLDRGNPQL 60

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A   F++  R  P++  AR++ LMSAF  Y +  Y +A    + +++ +P +K+  Y YY
Sbjct: 61  AAALFDEVERQHPYSPWARRAQLMSAFSYYVSRDYSKAIQSAQRFLSIHPGNKDAPYAYY 120

Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           L+ +SY + I DV  DQ+ T+  L  +  +  R+  S Y   AR  + + R+ LA KE++
Sbjct: 121 LIALSYYEQISDVQRDQKITEQALVALREVERRFPQSEYAADARLKIDLVRDHLAGKEMD 180

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           IGR+Y K G++ AA  RFQ V+ NY    HA EA+ RL E  +AL +  EA++  +++  
Sbjct: 181 IGRFYEKSGKWTAAQIRFQNVVENYQTTSHAAEALYRLTETSLALGIPQEAKKYAAVLGA 240

Query: 256 RYPQGYWARYVETLVK 271
            YP   W      LV+
Sbjct: 241 NYPGSEWYDKAYALVE 256


>gi|49475847|ref|YP_033888.1| competence lipoprotein comL precursor [Bartonella henselae str.
           Houston-1]
 gi|49238655|emb|CAF27901.1| Competence lipoprotein comL precursor [Bartonella henselae str.
           Houston-1]
          Length = 297

 Score =  263 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 86/255 (33%), Positives = 136/255 (53%), Gaps = 1/255 (0%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDS-VTDVRYQREVYEKAVLFLKEQNFSKA 76
            + +  L + F  + C L G   +    +   + V  +     +Y +A+  L+    + A
Sbjct: 17  NILRKVLGMIFLGSTCILAGCLFKEKNTLDPSAYVLKIDPPDVLYNQALASLESGRLADA 76

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            + F    + + +    RKSL+M AF  Y   KY  + S+ + YIT YPE+ +  Y YY+
Sbjct: 77  SKKFLIIEKQYAYTDWGRKSLVMGAFTNYRLEKYDDSISMAQRYITLYPEADDAAYAYYI 136

Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
           +G+S  + I DV  DQR TK  +  M  ++ERY NS YVK A+  +  GR QLA KE+++
Sbjct: 137 IGLSSFRRIPDVTRDQRDTKRAIAAMQLLIERYPNSEYVKDAKAKIRFGREQLAGKEMQV 196

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           GRYY +   Y+AA  RF+ V+  YSD    EEA+ RL E  +AL L  EA+   +++   
Sbjct: 197 GRYYEEGRRYLAASRRFRKVVEEYSDTNQIEEALFRLTEVNLALGLTLEAQTAAAILGRN 256

Query: 257 YPQGYWARYVETLVK 271
           YP+  W ++   L++
Sbjct: 257 YPKSEWYKFSYNLLQ 271


>gi|260775125|ref|ZP_05884023.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio coralliilyticus
           ATCC BAA-450]
 gi|260608826|gb|EEX34988.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio coralliilyticus
           ATCC BAA-450]
          Length = 241

 Score =  263 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 59/242 (24%), Positives = 105/242 (43%), Gaps = 17/242 (7%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
           T+   +A+  LVG    SS ++  D         E+Y +A + L+  N+  A +      
Sbjct: 5   TLSGLLALSVLVGCS--SSEEIVPDIPP-----SELYSEAQISLQSGNWLTAIDKLEALD 57

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
             +PF   + +  L   +  Y         +  E +    P  + +D+V Y+ G+++   
Sbjct: 58  SRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIERFSRLNPTHEKLDWVLYMRGLTHMAQ 117

Query: 145 IRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
            R+             D    K       +++ERY NSPY + A+  +   +N+LA  ++
Sbjct: 118 DRNFMHDLFNVDRSDRDPEPVKKAFADFKKLLERYPNSPYAEDAQKRMFALKNRLAEYDL 177

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
               +YL+R  ++AAI R Q +   Y D E A +++   +EAY  L L D A+    LI+
Sbjct: 178 ATADFYLRREAWIAAINRTQELQKTYPDTEAARKSLEIQLEAYEKLGLEDAAKRTRQLIE 237

Query: 255 ER 256
             
Sbjct: 238 LN 239


>gi|300114964|ref|YP_003761539.1| outer membrane assembly lipoprotein YfiO [Nitrosococcus watsonii
           C-113]
 gi|299540901|gb|ADJ29218.1| outer membrane assembly lipoprotein YfiO [Nitrosococcus watsonii
           C-113]
          Length = 262

 Score =  263 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 53/243 (21%), Positives = 107/243 (44%), Gaps = 10/243 (4%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
           F S+ +   +G      +    +           Y +A   L   ++ KA  ++ Q    
Sbjct: 6   FLSLCLILWLGGCAWLGKSPPEEKPEADWTVERFYAEAKAALNAGDYQKAITFYEQLEAR 65

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM-- 144
           +PF   A+++LL SA+  Y   + + A +  + +I  YP + ++DY +YL G+       
Sbjct: 66  YPFGVYAQQALLESAYAYYKFNEPESALAALDRFIRLYPLNSHMDYAHYLKGLVSFHRGV 125

Query: 145 --------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
                     +   D  + +  L+    +++R+ +S Y + +   +   RN+LA  E+ +
Sbjct: 126 GIVERYIPRDETQRDPESARNALKSFKTLIQRFPDSKYAEDSAQRIVYLRNRLAQHEINV 185

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
             YY++RG Y+ AI R + V+ NY       EA+  +   Y  L L +   + + +++  
Sbjct: 186 AHYYMRRGAYIGAINRAKYVVENYQRTPPVPEALTIMARGYEILGLNELKEDTLRILELS 245

Query: 257 YPQ 259
           +P 
Sbjct: 246 FPG 248


>gi|261380319|ref|ZP_05984892.1| competence lipoprotein ComL [Neisseria subflava NJ9703]
 gi|284796837|gb|EFC52184.1| competence lipoprotein ComL [Neisseria subflava NJ9703]
          Length = 267

 Score =  263 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 59/260 (22%), Positives = 111/260 (42%), Gaps = 14/260 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K  L +   +A+                  +T      ++Y +A   L   N+++A +
Sbjct: 1   MKKILLVVSLGLALSACANKGTIDKD----AQITQDWSVEKLYAEAQDELNSNNYTRAVK 56

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            +      FP    A++S L +A+  Y   + ++A +    +   +P+  N+DY  YL G
Sbjct: 57  LYEILESRFPNGRYAQQSQLDTAYAYYKDDEPEKALAAIARFQRHHPQHPNMDYALYLKG 116

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +      +              D +A +   Q  + +V+RY NS Y   A   +    + 
Sbjct: 117 LVLFNEDQSFLNKLASQDWSDRDPKANRDAYQAFAELVQRYPNSKYAADATERMAKLVDA 176

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           L   E+ + RYY+KRG YVAA  R Q +++ Y +  + EEA+A +  AY  L     A +
Sbjct: 177 LGGNEMSVARYYMKRGAYVAAANRAQKIVSRYQNTRYVEEALAMMELAYKKLDKPQLAAD 236

Query: 249 VVSLIQERYPQGYWARYVET 268
              +++  +PQ  + ++   
Sbjct: 237 TRRVLETNFPQSPFLQHEWR 256


>gi|209963938|ref|YP_002296853.1| tetratricopeptide repeat family protein [Rhodospirillum centenum
           SW]
 gi|209957404|gb|ACI98040.1| tetratricopeptide repeat family protein [Rhodospirillum centenum
           SW]
          Length = 274

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 74/217 (34%), Positives = 122/217 (56%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
            R   ++Y +A   L  +N+ KA   F++  R  P++  A ++ LM+A+  Y A +Y  A
Sbjct: 38  ERPVEQIYTEAANALDNENYLKAAALFDEVERQHPYSQWAVRAQLMAAYAHYEALRYDDA 97

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
            +  + +I+ +P ++N  Y YYL  + Y + I DV  DQ  T+  L  +  +  R+  + 
Sbjct: 98  ITTLDRFISLHPGNRNAAYAYYLKALCYYEQISDVRRDQSMTESALTALQDVARRFPATT 157

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
           Y + A   + + R+ LA K++E+GRYYL  G+Y+AAI RF+ V+  Y    H  EA+ RL
Sbjct: 158 YARDANLKLDLTRDHLAGKDMEVGRYYLVTGQYMAAIKRFRRVVDKYQTTSHVPEALHRL 217

Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
            EAY+AL ++DEA+   +L+   YP   W +   TL+
Sbjct: 218 TEAYLALGIVDEAQASAALLGHNYPGSDWYQRTYTLM 254


>gi|70732612|ref|YP_262375.1| competence lipoprotein ComL [Pseudomonas fluorescens Pf-5]
 gi|68346911|gb|AAY94517.1| competence lipoprotein ComL [Pseudomonas fluorescens Pf-5]
          Length = 341

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 14/229 (6%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
            SS++V  +++++V    E+Y++A   L   +++ A          +PF   A ++ L  
Sbjct: 18  CSSKEVVDENLSEV----ELYQQAQTDLDNHSYTSATAKLKALESRYPFGRYADQAQLEL 73

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PY 150
            +  Y   + + A S  E +I  +P+  NVDY YYL G++       +            
Sbjct: 74  IYANYKNAEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQDVGLLARFLPLDMTKR 133

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
           D  A +      +++  R+ NS Y   A+  +   RN LAA E+ +  YYL R  YVAA 
Sbjct: 134 DPGAARDSYNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLAAYEIHVADYYLTRQAYVAAA 193

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            R + V+ N+ +     + +A + EAY  L L + A   +  ++  YP 
Sbjct: 194 NRGRYVVENFQETPSVGDGLAVMTEAYQRLHLDELAATSLETLKLNYPN 242


>gi|268593136|ref|ZP_06127357.1| competence lipoprotein ComL [Providencia rettgeri DSM 1131]
 gi|291311409|gb|EFE51862.1| competence lipoprotein ComL [Providencia rettgeri DSM 1131]
          Length = 243

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 60/251 (23%), Positives = 104/251 (41%), Gaps = 20/251 (7%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
             ++         S+    LVG             V+      E+Y      L++ NF  
Sbjct: 1   MIRMKNLVAAATLSL---ILVGCSST-------PEVSPDSTPAEIYATGQQKLQDGNFKA 50

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A + F      +PF   A++  L   +  Y + +   A +  + ++   P   N+DYV Y
Sbjct: 51  AIKQFEALDNRYPFGPYAQQVQLDLIYAYYKSAELPMAIAAIDRFMRLNPTHPNIDYVLY 110

Query: 136 LVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           + G++   +          I     D +  ++  +  S++V  Y NS Y   A   +   
Sbjct: 111 MRGLTAMALDDSLLQGLFGIDRSDRDPQHARVAFKDFSQLVRYYPNSLYSNDASKRLVFL 170

Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
           +++LA  ++ +  YY KRG YVA + R Q +L +Y D E    A+A +  AY  + L  E
Sbjct: 171 KDRLAKFDLSVVEYYNKRGAYVAVVNRVQQMLKDYPDTEATRNALAYMEIAYNEMGLNQE 230

Query: 246 AREVVSLIQER 256
           A +V S+I   
Sbjct: 231 ANKVASIIAAN 241


>gi|152988068|ref|YP_001350516.1| competence protein ComL [Pseudomonas aeruginosa PA7]
 gi|150963226|gb|ABR85251.1| competence protein ComL [Pseudomonas aeruginosa PA7]
          Length = 341

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 10/229 (4%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           ++V +   + ++Y++A   L  ++++ A          +PF   A ++ L   +  Y   
Sbjct: 23  ETVDENLSESQLYQQAQDDLNNKSYNSAVTKLKALESRYPFGRYAEQAQLELIYANYKNM 82

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLM 158
           + + A +  E +I  +P+  NVDY YYL G+S     R +            D  A +  
Sbjct: 83  EPEAARAAAERFIRLHPQHPNVDYAYYLKGLSSFDQDRGLVARFLPLDMTKRDPGAARDS 142

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
               +++  R+ NS Y   A+  +   RN LAA EV +G YYLKR  YVAA  R + V+ 
Sbjct: 143 FNEFAQLTSRFPNSRYAPDAKARMVYLRNLLAAYEVHVGHYYLKRQAYVAAANRGRYVVE 202

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
           N+ +     + +A +VEAY  L L D A   +  ++  YP     +  E
Sbjct: 203 NFQETPAVGDGLAIMVEAYRRLGLDDLASTSLETLKLNYPDNASLKDGE 251


>gi|319638103|ref|ZP_07992867.1| competence lipoprotein comL [Neisseria mucosa C102]
 gi|317400748|gb|EFV81405.1| competence lipoprotein comL [Neisseria mucosa C102]
          Length = 267

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 59/260 (22%), Positives = 111/260 (42%), Gaps = 14/260 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K  L +   +A+                  +T      ++Y +A   L   N+++A +
Sbjct: 1   MKKILLVVSLGLALSACANKGTIDKD----AQITQDWSVEKLYAEAQDELNSNNYTRAVK 56

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            +      FP    A++S L +A+  Y   + ++A +    +   +P+  N+DY  YL G
Sbjct: 57  LYEILESRFPNGRYAQQSQLDTAYAYYKDDEPEKALAAIARFQRHHPQHPNMDYALYLKG 116

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +      +              D +A +   Q  + +V+RY NS Y   A   +    + 
Sbjct: 117 LVLFNEDQSFLNKLASQDWSDRDPKANRDAYQAFAELVQRYPNSKYAADATERMAKLVDA 176

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           L   E+ + RYY+KRG YVAA  R Q +++ Y +  + EEA+A +  AY  L     A +
Sbjct: 177 LGGNEMSVARYYMKRGAYVAAANRAQKIVSRYQNTRYVEEALAMMELAYKKLDKPQLAAD 236

Query: 249 VVSLIQERYPQGYWARYVET 268
              +++  +PQ  + ++   
Sbjct: 237 THRVLETNFPQSPFLQHEWR 256


>gi|240139704|ref|YP_002964181.1| putative lipoprotein UPF0169; putative exported protein
           [Methylobacterium extorquens AM1]
 gi|240009678|gb|ACS40904.1| putative lipoprotein UPF0169; putative exported protein
           [Methylobacterium extorquens AM1]
          Length = 291

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 72/227 (31%), Positives = 129/227 (56%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           + Y           ++Y + +  ++++++  A + F+Q  + + ++  +RK LLM+A+  
Sbjct: 36  EKYKPEAIPDTPADKLYSEGLAKMEDRDYENAAKQFDQLDKQYTYSDWSRKGLLMAAYAN 95

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y   KY  A +  + Y+ ++P SK+  Y  YL+ MS  + I DV  DQ  ++  L  +  
Sbjct: 96  YEGAKYDDAINASKRYLQRHPASKDAAYAQYLMAMSQYKQIPDVTRDQERSERALIALQE 155

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V++Y  S Y   A+  + + R+QLA KE+E+GR+YL++  + AAI RF+ V++ Y    
Sbjct: 156 LVQKYPTSEYAADAKAKIQITRDQLAGKEMEVGRFYLEKRAFPAAINRFRDVVSKYQTTR 215

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           HAEEA+ RLVEAY+AL L  EA+   +++   +P   W +    L++
Sbjct: 216 HAEEALERLVEAYMALGLTGEAQTAAAVLGHNFPDSPWYQDAYKLLQ 262


>gi|325981784|ref|YP_004294186.1| outer membrane assembly lipoprotein YfiO [Nitrosomonas sp. AL212]
 gi|325531303|gb|ADZ26024.1| outer membrane assembly lipoprotein YfiO [Nitrosomonas sp. AL212]
          Length = 268

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 56/258 (21%), Positives = 104/258 (40%), Gaps = 23/258 (8%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           L+  AL +   ++ C L+        D             + Y +A   L + ++  A +
Sbjct: 2   LHSLALFLVLGLSACGLLPDRTDDQED---------WSANKFYSEAKEKLNDGSYPAAIK 52

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            +      +P+  +A+++ L  A+  Y   +   A +  + +I  +P   NVDY YY+ G
Sbjct: 53  LYETLESRYPYGRIAQQAQLEVAYAHYKNDEPASAIAAADRFIKLHPNHANVDYAYYIKG 112

Query: 139 MSYAQ--------------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
           ++                        D +A+    +    +V R+  S Y   +R  +  
Sbjct: 113 LANFNEGWGMLGFLLKGPFKQDMSERDPKASYESFEIFKELVTRFPESKYAADSRQRMAY 172

Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
             N LA  E+   RYY+KR  Y+AA  R Q  +  Y      EEA+  ++ AY AL + D
Sbjct: 173 LLNLLAMGEIHTARYYMKRKAYIAAANRAQNAVKEYPPTPATEEALYIMIRAYEALEMYD 232

Query: 245 EAREVVSLIQERYPQGYW 262
              +   +++  +P   +
Sbjct: 233 LRDDAERVMRINFPNSIF 250


>gi|33592278|ref|NP_879922.1| competence lipoprotein precursor [Bordetella pertussis Tohama I]
 gi|33597726|ref|NP_885369.1| competence lipoprotein precursor [Bordetella parapertussis 12822]
 gi|33602574|ref|NP_890134.1| competence lipoprotein precursor [Bordetella bronchiseptica RB50]
 gi|33571923|emb|CAE41443.1| competence lipoprotein precursor [Bordetella pertussis Tohama I]
 gi|33574154|emb|CAE38484.1| competence lipoprotein precursor [Bordetella parapertussis]
 gi|33577013|emb|CAE34093.1| competence lipoprotein precursor [Bordetella bronchiseptica RB50]
 gi|332381695|gb|AEE66542.1| competence lipoprotein precursor [Bordetella pertussis CS]
          Length = 266

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 64/253 (25%), Positives = 112/253 (44%), Gaps = 15/253 (5%)

Query: 22  FALTIFFSIAVCFLV-GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
            AL    +++   +V G    S++       T      ++Y  A   +   N++ A E  
Sbjct: 1   MALRAAIALSTILIVAGCGSSSTKYDK----TAGWSAEQLYADAKQEVAAGNWTDARERL 56

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG-- 138
                 +PF   A+++L+  A+V +  G+ +QA +  + +   YP     DYV YL G  
Sbjct: 57  TAIESRYPFGTYAQQALIELAYVNWKDGENEQALAAIDRFQQLYPNHPGTDYVLYLKGLV 116

Query: 139 --------MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
                   MS          D +  +      + +V+R+ NS Y   A+  +T   N +A
Sbjct: 117 NFTPASAFMSNLTGQDPAERDPKGLRASYDAFNELVQRFPNSKYTPDAQKRMTWLVNAIA 176

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
             EV + RYY +RG YVAA  R Q V+ ++  A  +EEA+  +VE+Y  L + +   +  
Sbjct: 177 MNEVHVARYYYERGAYVAAANRAQTVITDFEGAPASEEALYIMVESYDKLGMTELKGDAE 236

Query: 251 SLIQERYPQGYWA 263
            ++ + YP   + 
Sbjct: 237 RVLDQNYPNSKFK 249


>gi|168239431|ref|ZP_02664489.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
 gi|194736160|ref|YP_002115674.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|194711662|gb|ACF90883.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|197287865|gb|EDY27253.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
          Length = 245

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 51/252 (20%), Positives = 99/252 (39%), Gaps = 17/252 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +    FL G     S++   D+        E+Y  A   L++ N+ +A  
Sbjct: 1   MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWKQAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y       A +  + ++   P   N+DYV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVMYMRG 113

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   +                D +  +      S++V  Y +S Y   A   +   +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVRSYPHSQYTTDATKRLVFLKDR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E  +  YY  RG +VA + R + +L NY D +   +A+  +  AY  + L  +A +
Sbjct: 174 LAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATRDALPLMENAYRQMQLNAQADK 233

Query: 249 VVSLIQERYPQG 260
           V  +I       
Sbjct: 234 VAKIIAANSKNT 245


>gi|322831461|ref|YP_004211488.1| outer membrane assembly lipoprotein YfiO [Rahnella sp. Y9602]
 gi|321166662|gb|ADW72361.1| outer membrane assembly lipoprotein YfiO [Rahnella sp. Y9602]
          Length = 244

 Score =  263 bits (672), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 55/248 (22%), Positives = 105/248 (42%), Gaps = 17/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +     LVG    SS++   D+  +V     +Y  A   L++ NF  A  
Sbjct: 1   MTRVKYLVAAATLSLALVGCS--SSKETVPDNPPNV-----LYATAQQKLQDGNFKGAIA 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y +     A +  + ++   P   N+DYV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKSADLPMAQASIDRFMRLNPTHPNIDYVMYMRG 113

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   +                D +  +   +  S+++  Y NS Y   A   +   +++
Sbjct: 114 LTDMALDDSALQGFFGVDRSDRDPQHARAAFRDFSQLIHTYPNSQYATDATKRLVFLKDR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E+ + +YY KRG YVA + R + +L +Y D +   +A+  +  AY  L L  +A +
Sbjct: 174 LAKYELSVVQYYTKRGAYVAVVNRVEQMLKDYPDTKATHDALPLMENAYRELQLNTQADK 233

Query: 249 VVSLIQER 256
           V  +I   
Sbjct: 234 VAKIIAAN 241


>gi|320182490|gb|EFW57384.1| outer membrane protein assembly complex subunit YfiO [Shigella
           boydii ATCC 9905]
          Length = 245

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 52/248 (20%), Positives = 101/248 (40%), Gaps = 17/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +    FL G     S++   D+        E+Y  A   L++ N+ +A  
Sbjct: 1   MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWRQAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y       A +  + +I   P   N+DYV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   +                D +  +      S++V  Y NS Y   A   +   +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDAAKRLVFLKDR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E  +  YY +RG +VA + R + +L +YSD +   +A+  +  AY  + +  +A +
Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYSDTQATRDALPLMENAYRQMQINAQAEK 233

Query: 249 VVSLIQER 256
           V  +I   
Sbjct: 234 VAKIIAAN 241


>gi|145297341|ref|YP_001140182.1| ComL family lipoprotein [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|142850113|gb|ABO88434.1| lipoprotein, ComL family [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 257

 Score =  262 bits (671), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 58/248 (23%), Positives = 105/248 (42%), Gaps = 17/248 (6%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L +  ++    + G    S++    D   +      +Y+KA L L   N+  A E     
Sbjct: 13  LLMSLALVATLITGCS--STKPKVPDEPPET-----LYQKARLKLDAGNYVNAIELLEAL 65

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY-- 141
              +PF   + +  L   +  Y      QA +  + +I   P  KN+DYV+Y+ G++   
Sbjct: 66  DSRYPFGAYSNQVQLDLIYAYYKQDDTAQAIANIDRFIRLNPAHKNIDYVFYMRGLTNMA 125

Query: 142 --AQMIRDV------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
                 +D         D    +   Q    +++ Y NS Y   AR  +   +N+LA  +
Sbjct: 126 GDYNFFQDFLGINRDDKDPSYARQAFQDFKTLLQNYPNSVYAADARARMIGLKNRLARYD 185

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           + +  YY+KR   +AA  R +L++  Y D    E+A+  +VE+Y  L +   A+    ++
Sbjct: 186 LSVAEYYVKRDALIAAANRAKLIVETYPDTAETEKALEIMVESYDTLKMPTLAQHAREVL 245

Query: 254 QERYPQGY 261
            + YP   
Sbjct: 246 AKNYPDNR 253


>gi|159044955|ref|YP_001533749.1| hypothetical protein Dshi_2414 [Dinoroseobacter shibae DFL 12]
 gi|157912715|gb|ABV94148.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12]
          Length = 279

 Score =  262 bits (671), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 79/260 (30%), Positives = 126/260 (48%), Gaps = 9/260 (3%)

Query: 11  IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKE 70
           +      +    AL +   +A C                   +      ++ +A   L+ 
Sbjct: 1   MTRVGTLRNRMLALGLAVILAACG---------SQQPEFPALEESPPDVIFNRAEFELQA 51

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
            N  +A  YF +  R +PF+  A+++L+M AF  +   +Y+ + +  + Y+  YP  ++ 
Sbjct: 52  NNLDEAARYFGEVERLYPFSEFAKRALIMQAFTYHRNREYESSRAAAQRYLDFYPADEDA 111

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
            Y  YL+ +SY   I DV  DQ  T   LQ +  ++E Y  S Y K +     +  N LA
Sbjct: 112 AYAQYLLALSYYDQIDDVGRDQGLTFQALQALRTVIEVYPESSYAKSSILKFDLAFNHLA 171

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
           AKE+EIGRYYLKRG Y AAI RF++V+ ++    H  EA+ RLVEAY++L L  EA+   
Sbjct: 172 AKEMEIGRYYLKRGHYAAAINRFRVVVEDFQTTTHTPEALHRLVEAYLSLGLEGEAQTAG 231

Query: 251 SLIQERYPQGYWARYVETLV 270
           +++   Y    W      L+
Sbjct: 232 AILGFNYQATDWYEDSFRLL 251


>gi|15599741|ref|NP_253235.1| competence protein ComL [Pseudomonas aeruginosa PAO1]
 gi|107099792|ref|ZP_01363710.1| hypothetical protein PaerPA_01000810 [Pseudomonas aeruginosa PACS2]
 gi|116052690|ref|YP_793006.1| competence protein ComL [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218893640|ref|YP_002442509.1| competence protein ComL [Pseudomonas aeruginosa LESB58]
 gi|254238707|ref|ZP_04932030.1| competence protein ComL [Pseudomonas aeruginosa C3719]
 gi|254244557|ref|ZP_04937879.1| competence protein ComL [Pseudomonas aeruginosa 2192]
 gi|296391366|ref|ZP_06880841.1| competence protein ComL [Pseudomonas aeruginosa PAb1]
 gi|12231047|sp|P33641|Y9F5_PSEAE RecName: Full=UPF0169 lipoprotein PA4545; AltName: Full=ORFY;
           Flags: Precursor
 gi|9950789|gb|AAG07933.1|AE004868_4 competence protein ComL [Pseudomonas aeruginosa PAO1]
 gi|32423743|gb|AAP81267.1| competence protein [Pseudomonas aeruginosa PA14]
 gi|115587911|gb|ABJ13926.1| competence lipoprotein ComL [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126170638|gb|EAZ56149.1| competence protein ComL [Pseudomonas aeruginosa C3719]
 gi|126197935|gb|EAZ61998.1| competence protein ComL [Pseudomonas aeruginosa 2192]
 gi|218773868|emb|CAW29682.1| competence protein ComL [Pseudomonas aeruginosa LESB58]
          Length = 341

 Score =  262 bits (671), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 10/229 (4%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           ++V +   + ++Y++A   L  ++++ A          +PF   A ++ L   +  Y   
Sbjct: 23  ETVDENLSESQLYQQAQDDLNNKSYNSAVTKLKALESRYPFGRYAEQAQLELIYANYKNM 82

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLM 158
           + + A +  E +I  +P+  NVDY YYL G+S     R +            D  A +  
Sbjct: 83  EPEAARAAAERFIRLHPQHPNVDYAYYLKGLSSFDQDRGLLARFLPLDMTKRDPGAARDS 142

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
               +++  R+ NS Y   A+  +   RN LAA EV +G YYLKR  YVAA  R + V+ 
Sbjct: 143 FNEFAQLTSRFPNSRYAPDAKARMVYLRNLLAAYEVHVGHYYLKRQAYVAAANRGRYVVE 202

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
           N+ +     + +A +VEAY  L L D A   +  ++  YP     +  E
Sbjct: 203 NFQETPAVGDGLAIMVEAYRRLGLDDLASTSLETLKLNYPDNASLKDGE 251


>gi|154244287|ref|YP_001415245.1| putative lipoprotein [Xanthobacter autotrophicus Py2]
 gi|154158372|gb|ABS65588.1| putative lipoprotein [Xanthobacter autotrophicus Py2]
          Length = 284

 Score =  262 bits (671), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 77/231 (33%), Positives = 124/231 (53%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
                   D +       ++Y + +  L+ Q   KA + F    +  P++  ARKSLLM+
Sbjct: 30  TGCASDKDDVLPPDEPAEKIYNEGLTLLRRQEPEKAAKRFEDVDKTHPYSEWARKSLLMT 89

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
            +  + AGKY +A + G+ YI  YP S++  Y +YLV  +  + I D+  DQR T+  L 
Sbjct: 90  TYAYFEAGKYDEAIATGKRYIALYPGSQDAAYAHYLVASALYENIPDITRDQRKTRQALD 149

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
            +  +  +Y N+ Y   A+  + V R+QLA KE+ IGRYYL++  Y  AI RF++V+  Y
Sbjct: 150 ALEDVARKYPNTEYAATAKKKIEVARDQLAGKEMLIGRYYLEQRNYTGAINRFKVVVTQY 209

Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
                 EEA+ RL EAY+AL ++ EA+   +++   +P   W +    LV+
Sbjct: 210 QTTRQVEEALYRLTEAYMALGVVSEAQTAAAVLGYNFPDSSWYKDAYKLVQ 260


>gi|257481619|ref|ZP_05635660.1| competence lipoprotein ComL [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 266

 Score =  262 bits (671), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 14/229 (6%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
            SS++V  +++++V    E+Y++A   L   +++ A E        +PF   A ++ L  
Sbjct: 18  CSSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLEL 73

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPY 150
            +  Y  G+ + A S  E +I  +P+  NVDY YY+ G++                    
Sbjct: 74  IYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKR 133

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
           D  A +      +++  R+ NS Y   A+  +   RN LA+ E+ +  YYL R  YVAA 
Sbjct: 134 DPGAARDSFNEFAQLTSRFPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAA 193

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            R + V+ N+ +     + +A +VE+Y  L L D A   + +++  YP 
Sbjct: 194 NRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242


>gi|313107190|ref|ZP_07793389.1| competence protein ComL [Pseudomonas aeruginosa 39016]
 gi|310879891|gb|EFQ38485.1| competence protein ComL [Pseudomonas aeruginosa 39016]
          Length = 341

 Score =  262 bits (671), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 10/229 (4%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           ++V +   + ++Y++A   L  ++++ A          +PF   A ++ L   +  Y   
Sbjct: 23  ETVDENLSESQLYQQAQDDLNNKSYNSAVTKLKALESRYPFGRYAEQAQLELIYANYKNM 82

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLM 158
           + + A +  E +I  +P+  NVDY YYL G+S     R +            D  A +  
Sbjct: 83  EPEAARAAAERFIRLHPQHPNVDYAYYLKGLSSFDQDRGLLARFLPLDMTKRDPGAARDS 142

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
               +++  R+ NS Y   A+  +   RN LAA EV +G YYLKR  YVAA  R + V+ 
Sbjct: 143 FNEFAQLTSRFPNSRYAPDAKARMVYLRNLLAAYEVHVGHYYLKRQAYVAAANRGRYVVE 202

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
           N+ +     + +A +VEAY  L L D A   +  ++  YP     +  E
Sbjct: 203 NFQETPAVGDGLAIMVEAYRRLGLDDLASTSLETLKLNYPDNASLKDGE 251


>gi|225076528|ref|ZP_03719727.1| hypothetical protein NEIFLAOT_01576 [Neisseria flavescens
           NRL30031/H210]
 gi|224952207|gb|EEG33416.1| hypothetical protein NEIFLAOT_01576 [Neisseria flavescens
           NRL30031/H210]
          Length = 267

 Score =  262 bits (671), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 59/260 (22%), Positives = 111/260 (42%), Gaps = 14/260 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K  L +   +A+                  +T      ++Y +A   L   N+++A +
Sbjct: 1   MKKILLVVSLGLALSACANKGTIDKD----AQITQDWSVEKLYAEAQDELNSNNYTRAVK 56

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            +      FP    A++S L +A+  Y   + ++A +    +   +P+  N+DY  YL G
Sbjct: 57  LYEILESRFPNGRYAQQSQLDTAYAYYKDDEPEKALAAIARFQRHHPQHPNMDYALYLKG 116

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +      +              D +A +   Q  + +V+RY NS Y   A   +    + 
Sbjct: 117 LVLFNEDQSFLNKLASQDWSDRDPKANRDAYQAFAELVQRYPNSKYAADATERMAKLVDA 176

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           L   E+ + RYY+KRG YVAA  R Q +++ Y +  + EEA+A +  AY  L     A +
Sbjct: 177 LGGNEISVARYYMKRGAYVAAANRAQKIVSRYQNTRYVEEALAMMELAYKKLDKPQLAAD 236

Query: 249 VVSLIQERYPQGYWARYVET 268
              +++  +PQ  + ++   
Sbjct: 237 TRRVLETNFPQSPFLQHEWR 256


>gi|163746142|ref|ZP_02153501.1| competence lipoprotein ComL, putative [Oceanibulbus indolifex
           HEL-45]
 gi|161380887|gb|EDQ05297.1| competence lipoprotein ComL, putative [Oceanibulbus indolifex
           HEL-45]
          Length = 288

 Score =  262 bits (671), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 73/248 (29%), Positives = 123/248 (49%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           A+ +  ++A C         S     +   +     +++E+    L   N  +A  YF +
Sbjct: 13  AVLLIATLAACGGGDGRSDGSFFNPQEIPLETYSAEQIFERGEYELTNNNPGEAAFYFAE 72

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
             R +P++  A+++L+M AF  +    Y  + S  + +I  YP   +  Y  YL+ +SY 
Sbjct: 73  IERLYPYSEWAKRALIMQAFAYHKDQDYPNSRSAAQRFIDFYPAEDDAAYAQYLLALSYY 132

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
             I +V  DQ  T   LQ +  ++E Y +S Y + A     +  + LA KE+EIGRYYL+
Sbjct: 133 DQIDEVGRDQGLTFQALQSLRAVIEGYPDSEYARSAILKFDLAFDHLAGKEMEIGRYYLR 192

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           R  Y AAI RF++V+ ++    H  EA+ RLVE+Y++L L  EA+   +++   Y    W
Sbjct: 193 RDHYTAAINRFRVVVEDFQTTTHTAEALHRLVESYLSLGLDKEAQTAGAILGHNYRGSEW 252

Query: 263 ARYVETLV 270
                 L+
Sbjct: 253 YEDSYKLL 260


>gi|259418921|ref|ZP_05742838.1| tetratricopeptide TPR_2 repeat protein [Silicibacter sp. TrichCH4B]
 gi|259345143|gb|EEW56997.1| tetratricopeptide TPR_2 repeat protein [Silicibacter sp. TrichCH4B]
          Length = 283

 Score =  262 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 77/248 (31%), Positives = 121/248 (48%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           A  I     +  L                 +V    ++YE+    L       A  YF++
Sbjct: 8   AKGIGVVALMATLAACGGADGDAQRSGQDLEVFTPAQIYERGEFELARNREQDAAYYFSE 67

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
             R +P++  A++SL+M AF  + A  Y+ + S  + YI  YP  ++  Y  YL+ +SY 
Sbjct: 68  VERLYPYSEWAKQSLIMQAFTYHQAEDYENSRSAAQRYIDFYPTDEDAAYAQYLLALSYY 127

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
             I +V  DQ  T   LQ +  ++E Y +S Y   A     +  + LA KE+EIGRYYLK
Sbjct: 128 DQIDEVGRDQGLTFQALQALRTVIEVYPDSEYASSAILKFDLAFDHLAGKEMEIGRYYLK 187

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           R  Y AAI RF++V+ ++    H  EA+ RL+EAY++L L DEA+   +++   +    W
Sbjct: 188 RQHYTAAINRFRVVVEDFQTTSHTAEALYRLIEAYLSLGLTDEAQSAGAILGHNFQSTDW 247

Query: 263 ARYVETLV 270
                 L+
Sbjct: 248 YEDGYKLL 255


>gi|329890234|ref|ZP_08268577.1| competence lipoprotein comL [Brevundimonas diminuta ATCC 11568]
 gi|328845535|gb|EGF95099.1| competence lipoprotein comL [Brevundimonas diminuta ATCC 11568]
          Length = 287

 Score =  262 bits (670), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 117/262 (44%), Gaps = 5/262 (1%)

Query: 12  FEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ 71
               A +       +  ++A   L        R        + R    +Y      L+ +
Sbjct: 3   SPLLASKSRTGLTLLTVAVAALSLSACAGNKPRQKL---AYEERPVEALYNTGYQRLQSK 59

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
            +  A +YF +  R  P++  AR+++LM  +  Y    YQ A +  + +I  +P + +  
Sbjct: 60  RWMDAVDYFQEVERQHPYSEWARRAILMQVYAYYQNNNYQDAIAAADRFIALFPGNPSAS 119

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
           Y +Y+  +   + I DV  DQ   +  L  +  +V RY  S Y   AR  + +  +QLA 
Sbjct: 120 YAFYMKAVCNFEQIVDVGRDQGYAEAALAGLRDVVRRYPGSSYATDARVKIDMVNDQLAG 179

Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLAN--YSDAEHAEEAMARLVEAYVALALMDEAREV 249
           KE+ +GRYY +  + + A+ R++ V+ N  +    H  EA+ RLVE  ++L L +EA   
Sbjct: 180 KEMTVGRYYQRANQPLGALNRYKAVINNPDFQRTSHTPEALYRLVEVNLSLGLTEEATRN 239

Query: 250 VSLIQERYPQGYWARYVETLVK 271
            +++   YP   W      L++
Sbjct: 240 AAVLGHNYPGSPWYAEAFALLR 261


>gi|254517172|ref|ZP_05129230.1| competence protein ComL [gamma proteobacterium NOR5-3]
 gi|219674677|gb|EED31045.1| competence protein ComL [gamma proteobacterium NOR5-3]
          Length = 280

 Score =  262 bits (670), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 61/236 (25%), Positives = 106/236 (44%), Gaps = 14/236 (5%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
           F+ G     + D   D   D   ++++Y++A  +L  +NF  A          +PF   A
Sbjct: 2   FVGGCA---NNDEDGDIAAD-SGEQQIYDEAQRYLNARNFDLAIRALQALESRYPFGRYA 57

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP---- 149
            ++ L   +  Y A   + A    + +I  +P+  NVDY YY+ G++ A   +D      
Sbjct: 58  EQAQLELIYAHYGAYSPEAAIEAADRFIRLHPQHPNVDYAYYMKGLATATASQDFLSRFT 117

Query: 150 ------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
                  D    K      S++V R+ NSPY   A+  +   RN LA  E+ +  YY +R
Sbjct: 118 PTDKTLRDTSFAKEAFAEFSQLVTRFPNSPYASDAKSRMVYLRNLLARNEIHVANYYFRR 177

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           G Y+AA  R + V+ N+       + +A + + Y+ L + D A+  +  +   YP+
Sbjct: 178 GAYLAAANRGRYVVENFQGTPAVGDGLAVMAQGYLILGMNDLAQNAIDTLALNYPE 233


>gi|188534768|ref|YP_001908565.1| outer membrane protein assembly complex subunit YfiO [Erwinia
           tasmaniensis Et1/99]
 gi|188029810|emb|CAO97691.1| Conserved hypothetical protein [Erwinia tasmaniensis Et1/99]
          Length = 243

 Score =  262 bits (670), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 94/228 (41%), Gaps = 15/228 (6%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
               S+DV  DS        E+Y  A   L++ NF  A          +PF   +++  L
Sbjct: 19  GCSGSKDVVPDSPP-----SEIYATAQQKLQDGNFKGAITQLEALDNRYPFGPYSQQVQL 73

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDV 148
              +  Y       A +  + ++   P   N+DYV Y+ G++   +          I   
Sbjct: 74  DLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVIYMRGLTDMALDDSALQGFFGIDRS 133

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
             D    +   +  S+++  Y NS Y   A   +   +++LA  E+ +  +Y KRG YVA
Sbjct: 134 DRDPTHARDAFKDFSQLLRGYPNSQYATDAHKRLVFLKDRLAKYELSVVEFYTKRGAYVA 193

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            + R + +L +Y D +   +A+  +  AY  L L  +A  V  +I   
Sbjct: 194 VVNRVEQMLKDYPDTQATHKALPLMENAYRQLQLNSQAERVAKIIAAN 241


>gi|319425421|gb|ADV53495.1| beta barrel protein translocation component, BamC [Shewanella
           putrefaciens 200]
          Length = 253

 Score =  262 bits (670), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 56/253 (22%), Positives = 97/253 (38%), Gaps = 14/253 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +YKF+  +   +    L         +     +        +Y +A   ++  N++KA  
Sbjct: 1   MYKFSKGVTLVLFSLALSACSSSPDDN----DIAAKTSPDVLYSQARTSMELGNYAKAVR 56

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   FPF     +  L   +  Y         +  + +I   P   N+DYVYY+ G
Sbjct: 57  SLEALDSRFPFGPHKTQVQLDLIYAYYKMDDVASGIANIDRFIRLNPTHPNIDYVYYMRG 116

Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +   Q           I     D +  +   +   R+++ Y NS Y   A+  +   +N+
Sbjct: 117 LVNMQADNYLFHDMLSIDRTDRDPKNAQDAFKDFDRLIKTYPNSKYAADAQKRMFSLKNR 176

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA   +++  YYLK   + AA  R Q VL  Y      E A+  ++EAY  L      + 
Sbjct: 177 LAKYSIQVAEYYLKMNAWSAAAIRAQSVLETYPGTPSTERALEIMIEAYGELGQNQLKQN 236

Query: 249 VVSLIQERYPQGY 261
           V+ ++Q  YP   
Sbjct: 237 VLMVMQANYPNNE 249


>gi|83949542|ref|ZP_00958275.1| competence lipoprotein ComL, putative [Roseovarius nubinhibens ISM]
 gi|83837441|gb|EAP76737.1| competence lipoprotein ComL, putative [Roseovarius nubinhibens ISM]
          Length = 283

 Score =  262 bits (670), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 72/251 (28%), Positives = 129/251 (51%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
            K    I   +    L G      R    D   +    + ++E+    L  +N+  A + 
Sbjct: 5   TKRVTLIGAVLVASLLAGCNSIRGRVERGDLDYENYTAQHIFERGEYDLSRRNYDLAAQS 64

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
           F +  R +P++ + +++++M A+  +    Y+ + S  + YI  YP  ++  Y  YL+ +
Sbjct: 65  FGEIERLYPYSELTKRAVIMQAYSHHLDKDYEASRSAAQRYIDFYPTDEDAAYAQYLLAL 124

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           SY   I +V  DQ  T L LQ + +++E Y +S Y + A     +  + LA+KE+E+GRY
Sbjct: 125 SYYDQIDEVGRDQGLTFLALQELRKVIEIYPDSEYARSAILKFDLAFDHLASKEMEVGRY 184

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           YLKR  + AAI RF++V+ ++    H  EA+ RLVEAY++L L++EA+   +++   +  
Sbjct: 185 YLKRDHFSAAINRFRVVVEDFQTTSHTPEALHRLVEAYLSLGLVNEAQTAAAILGHNFRA 244

Query: 260 GYWARYVETLV 270
             W      L+
Sbjct: 245 TDWYEDSYALL 255


>gi|77461058|ref|YP_350565.1| competence lipoprotein ComL, putative [Pseudomonas fluorescens
           Pf0-1]
 gi|77385061|gb|ABA76574.1| putative lipoprotein [Pseudomonas fluorescens Pf0-1]
          Length = 338

 Score =  262 bits (670), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 10/221 (4%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           + V +   + E+Y++A   L   +++ A          +PF   A ++ L   +  Y   
Sbjct: 22  EVVDENLSEAELYQQAQQDLDNNSYTSATAKLKALESRYPFGRYADQAQLELIYANYKNA 81

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLM 158
           + + A S  E +I  +P+  NVDY YYL G++       +            D  A +  
Sbjct: 82  EPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQDVGLLARFLPLDMTKRDPGAARDS 141

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
               +++  RY NS Y   A+  +   RN LAA E+ +  YYL R  YVAA  R + V+ 
Sbjct: 142 YNEFAQLTSRYPNSRYAPDAKQRMIYLRNLLAAYEIHVADYYLTRQAYVAAANRGRYVVE 201

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           N+ +     + +A + EAY  L L + A   +  ++  YP 
Sbjct: 202 NFQETPSVGDGLAVMTEAYQRLHLDELAATSLETLKLNYPN 242


>gi|156932862|ref|YP_001436778.1| outer membrane protein assembly complex subunit YfiO [Cronobacter
           sakazakii ATCC BAA-894]
 gi|156531116|gb|ABU75942.1| hypothetical protein ESA_00659 [Cronobacter sakazakii ATCC BAA-894]
          Length = 245

 Score =  262 bits (670), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 49/232 (21%), Positives = 93/232 (40%), Gaps = 15/232 (6%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
               S++   D+        E+Y  A   L++ N+  A          +PF   +++  L
Sbjct: 19  GCSGSKEEVPDNPP-----SEIYATAQQKLQDGNWKAAITQLEALDNRYPFGPYSQQVQL 73

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV---------- 148
              +  Y       A +  + +I   P   N+DYV Y+ G++   +              
Sbjct: 74  DLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVIYMRGLTNMALDDSALQGFFGVDRS 133

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
             D +  +   +  S++V  Y  S Y   A   +   +++L+  E+ + +YY KRG +VA
Sbjct: 134 DRDPQHARDAFRDFSKLVRGYPQSQYATDATKRLVYLKDRLSKYELSVAQYYTKRGAWVA 193

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            + R + +L +Y D +   E +  +  AY  L L  +A +V  +I       
Sbjct: 194 VVNRVEGMLRDYPDTQATHEGLGLMENAYRELQLNAQADKVAKIIAANNTGS 245


>gi|187929000|ref|YP_001899487.1| outer membrane assembly lipoprotein YfiO [Ralstonia pickettii 12J]
 gi|187725890|gb|ACD27055.1| outer membrane assembly lipoprotein YfiO [Ralstonia pickettii 12J]
          Length = 258

 Score =  262 bits (670), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 58/247 (23%), Positives = 108/247 (43%), Gaps = 14/247 (5%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
            +A   +        +       T      ++Y +A   L   +++KA +Y+ +    +P
Sbjct: 3   GVACLAISACGILPEQQDE----TAGWSANKLYSEAKDSLDGGDYAKAVKYYEKLESRYP 58

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM---- 144
           F   A+++ + +A+  Y  G+   A +  + +I  +P   +VDY YYL G+         
Sbjct: 59  FGQYAQQAQIETAYANYKDGETAAALAAVDRFIQLHPNHPSVDYAYYLKGLINFNDNLGW 118

Query: 145 ------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
                       D +A +        ++ R+ NS Y   A   +    N +A  EV   R
Sbjct: 119 LGRFSNQDLSERDPKAARAAYDAFKTLITRFPNSKYTPDATQRMQYIVNAMAEHEVGAAR 178

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           YY +RG Y+AA+ R Q  + +Y  A   EEA+  ++++Y AL + D   +   +I++ YP
Sbjct: 179 YYYRRGAYLAAVNRAQDAIKDYDRAPAVEEALYIMMKSYEALGMKDMRDDTERIIKQNYP 238

Query: 259 QGYWARY 265
           +  +  Y
Sbjct: 239 KSDFLAY 245


>gi|126729262|ref|ZP_01745076.1| competence lipoprotein ComL, putative [Sagittula stellata E-37]
 gi|126710252|gb|EBA09304.1| competence lipoprotein ComL, putative [Sagittula stellata E-37]
          Length = 265

 Score =  261 bits (669), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 72/237 (30%), Positives = 123/237 (51%), Gaps = 1/237 (0%)

Query: 35  LVGWERQSSRDVYLD-SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
           + G      +DV  D    +    +++YE+    +  +++     YF +  R +P++  A
Sbjct: 1   MSGCGELKRKDVGPDGQPLETYTAKQIYERGEYEMSRKDYEDGAFYFGEVERLYPYSDWA 60

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
           +++L+M A+  +    Y+ A    + YI  YP   +  Y  YL+ +SY   I  V  DQ 
Sbjct: 61  KRALIMQAYSYHKNKDYENARGAAQRYIDFYPSDDDAAYAQYLLALSYYDQIELVGRDQG 120

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
            T   LQ +  ++ERY +S Y + +     +  + LA KE+EIGRYYLKR  + AAI RF
Sbjct: 121 LTFQALQALRAVIERYPDSEYARSSILKFDLAFDHLAGKEMEIGRYYLKRDHFGAAISRF 180

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
           ++V+ ++    H  EA+ RLVEAY++L L++EA+   +++   Y    W      L+
Sbjct: 181 RVVVEDFQTTTHTPEALHRLVEAYLSLGLVEEAQTAAAILGYNYQSTEWYEDSYQLL 237


>gi|120599939|ref|YP_964513.1| putative lipoprotein [Shewanella sp. W3-18-1]
 gi|146292125|ref|YP_001182549.1| putative lipoprotein [Shewanella putrefaciens CN-32]
 gi|120560032|gb|ABM25959.1| putative lipoprotein [Shewanella sp. W3-18-1]
 gi|145563815|gb|ABP74750.1| putative lipoprotein [Shewanella putrefaciens CN-32]
          Length = 253

 Score =  261 bits (669), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 56/253 (22%), Positives = 96/253 (37%), Gaps = 14/253 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +YKF+  +   +            S       +        +Y +A   ++  N++KA  
Sbjct: 1   MYKFSKGVTLVL----FSLALSACSSSPDDSDIAAKTSPDVLYSQARTSMELGNYAKAVR 56

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   FPF     +  L   +  Y         +  + +I   P   N+DYVYY+ G
Sbjct: 57  SLEALDSRFPFGPHKTQVQLDLIYAYYKMDDVASGIANIDRFIRLNPTHPNIDYVYYMRG 116

Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +   Q           I     D +  +   +   R+++ Y NS Y   A+  +   +N+
Sbjct: 117 LVNMQADNYLFHDMLSIDRTDRDPKNAQDAFKDFDRLIKTYPNSKYAADAQKRMFSLKNR 176

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA   +++  YYLK   + AA  R Q VL  Y      E A+  ++EAY  L      + 
Sbjct: 177 LAKYSIQVAEYYLKMNAWSAAAIRAQSVLETYPGTPSTERALEIMIEAYGELGQNQLKQN 236

Query: 249 VVSLIQERYPQGY 261
           V+ ++Q  YP   
Sbjct: 237 VLMVMQANYPNNE 249


>gi|304399172|ref|ZP_07381039.1| outer membrane assembly lipoprotein YfiO [Pantoea sp. aB]
 gi|304353226|gb|EFM17606.1| outer membrane assembly lipoprotein YfiO [Pantoea sp. aB]
          Length = 243

 Score =  261 bits (669), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 54/251 (21%), Positives = 101/251 (40%), Gaps = 20/251 (7%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
             ++         S+A+    G     S D   D+        E+Y  A   L++ NF  
Sbjct: 1   MTRMKHLVAAATLSLALVGCSG-----SNDAVPDNPP-----SEIYATAQQKLQDGNFKA 50

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A +        +PF   +++  L   +  Y       A +    ++   P   N+DYV Y
Sbjct: 51  AIKQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIARFMRLNPTHPNIDYVIY 110

Query: 136 LVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           + G++   +          I     D    +   +  S+++  Y NS Y   A+  +   
Sbjct: 111 MKGLTDMALDDSALQGFFGIDRSDRDPTHARDAFRDFSQLLRNYPNSQYAADAQKRLVYL 170

Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
           +++LA  E+ + ++Y KR  YVA + R + ++ +Y D +   +A+  +  AY  L L  E
Sbjct: 171 KDRLAKYELSVAQFYTKREAYVAVVNRVEGMMRDYPDTQATHDALPLMENAYRNLQLNAE 230

Query: 246 AREVVSLIQER 256
           A +V  +I   
Sbjct: 231 ADKVAKIIAVN 241


>gi|293604135|ref|ZP_06686543.1| competence lipoprotein ComL [Achromobacter piechaudii ATCC 43553]
 gi|292817360|gb|EFF76433.1| competence lipoprotein ComL [Achromobacter piechaudii ATCC 43553]
          Length = 262

 Score =  261 bits (669), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 58/251 (23%), Positives = 102/251 (40%), Gaps = 14/251 (5%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            +    AV  + G    +S+       T      ++Y  A   +    + +A E      
Sbjct: 3   VVIALFAVIVIAGCGSTNSKYDK----TTNWSAEQLYADAKSEMSSGGWKEARERLTAIE 58

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ- 143
             +PF   A+++LL  A+V +  G+ +QA +  + +   YP     DY  YL G+     
Sbjct: 59  SRYPFGVYAQQALLELAYVNWKDGENEQALAAIDRFQQLYPNHPGTDYALYLKGLINFTP 118

Query: 144 ---------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
                           D +  +      + +++RY +S Y   A   +    N +A  EV
Sbjct: 119 ASAFMTSITGQDPAERDPKGLRASYDAFNELIKRYPDSKYSVDAEKRIAWLVNTIAMNEV 178

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
            + RYY +RG YVAA  R Q V+ ++  A   EEA+  +VE+Y  L + D   +   +  
Sbjct: 179 HVARYYYERGAYVAAANRAQTVITDFEGAPATEEALYLMVESYDKLGMTDLKNDAQRVYD 238

Query: 255 ERYPQGYWARY 265
           + +P   +   
Sbjct: 239 KNFPNSDFKSK 249


>gi|260577083|ref|ZP_05845061.1| outer membrane assembly lipoprotein YfiO [Rhodobacter sp. SW2]
 gi|259020661|gb|EEW23979.1| outer membrane assembly lipoprotein YfiO [Rhodobacter sp. SW2]
          Length = 280

 Score =  261 bits (669), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 86/249 (34%), Positives = 140/249 (56%), Gaps = 5/249 (2%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ-NFSKAYEYFN 81
           A  +  ++ V  L G     +++V LDS+T      E+Y++    L+ +   ++A  YF 
Sbjct: 8   ARLLGTALIVATLAGCGGGGTKEVPLDSLT----AEEIYKRGEYALETRPKPTEAIRYFT 63

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
           +  R +P+   A+++L+M AF  + + KY++A S  + Y+  YP  ++  Y  YL+ +SY
Sbjct: 64  EVERLYPYTEWAKRALIMQAFTYHKSKKYEEARSAAQRYLDYYPGDEDAGYAKYLLALSY 123

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
              I DV  DQ  T   LQ +  ++E Y ++ Y + A     +  +QLAAKE+EIGRYYL
Sbjct: 124 YDQIDDVGRDQGVTFQALQALRAVIEEYPDTEYARSAILKFDMAFDQLAAKEMEIGRYYL 183

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           KRG Y AAI RF++V+ ++    H  EA+ RLVEAY+AL L DEA+   +++   Y    
Sbjct: 184 KRGNYSAAINRFRVVVQDFQTTTHTAEALHRLVEAYLALGLTDEAQTAGAILGYNYQASP 243

Query: 262 WARYVETLV 270
           + +    L+
Sbjct: 244 FYQDSYKLL 252


>gi|331008768|gb|EGH88824.1| competence lipoprotein ComL [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 340

 Score =  261 bits (669), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 60/229 (26%), Positives = 107/229 (46%), Gaps = 14/229 (6%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
            SS++V  +++++V    E+Y++A   L   +++ A E        +PF   A ++ L  
Sbjct: 18  CSSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLEL 73

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPY 150
            +  Y  G+ + A S  E +I  +P+  NVDY YY+ G++                    
Sbjct: 74  IYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKR 133

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
           D  A +      +++  R+ NS Y   A+  +   RN LA+ E+ +  Y L R  YVAA 
Sbjct: 134 DPGAARDSFNEFAQLTSRFPNSRYSPDAKQRMIYLRNLLASYEIHVADYSLTRQAYVAAA 193

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            R + V+ N+ +     + +A +VE+Y  L L D A   + +++  YP 
Sbjct: 194 NRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242


>gi|114331226|ref|YP_747448.1| TPR repeat-containing protein [Nitrosomonas eutropha C91]
 gi|114308240|gb|ABI59483.1| TPR repeat [Nitrosomonas eutropha C91]
          Length = 257

 Score =  261 bits (669), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 63/252 (25%), Positives = 108/252 (42%), Gaps = 18/252 (7%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
            L      S + V            + Y +A   L E N+S A + F      +P+   A
Sbjct: 3   LLAACGILSEKTVDNSQ----WSASKFYIEAKNELNEGNYSAAVKLFEALEARYPYGRFA 58

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----- 148
           +++ L  A+  Y   +   A +  + +I  YP   N+DY YY+ G++     + +     
Sbjct: 59  QQAQLEIAYAYYKDQEQASAIAAADRFIQLYPHHHNIDYAYYIKGLASFNDDQGLLGYIT 118

Query: 149 ---------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
                      D +A++   +    +V RY +S Y   A   +    N LA  E+ + RY
Sbjct: 119 TKIIKQDLSERDAKASRESFEDFKLLVTRYPDSKYTPDALQRMAYLVNALARGEIHVARY 178

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           Y+KR  Y+AA+ R Q VL  Y      EEA+  +  AY  L L+D   +   +I++ +P+
Sbjct: 179 YMKRKAYIAALRRAQFVLEEYPQTPATEEALYIMASAYNELGLIDLREDTEKVIKKNFPE 238

Query: 260 GYWARYVETLVK 271
             +     +LV+
Sbjct: 239 SAYLTDSGSLVE 250


>gi|260598976|ref|YP_003211547.1| outer membrane biogenesis protein BamD [Cronobacter turicensis
           z3032]
 gi|260218153|emb|CBA32978.1| UPF0169 lipoprotein yfiO [Cronobacter turicensis z3032]
          Length = 229

 Score =  261 bits (669), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 50/232 (21%), Positives = 94/232 (40%), Gaps = 17/232 (7%)

Query: 35  LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94
           + G     S++   D+        E+Y  A   L++ N+  A          +PF   ++
Sbjct: 1   MAGCS--GSKEEVPDNPP-----SEIYATAQQKLQDGNWKAAITQLEALDNRYPFGPYSQ 53

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV------ 148
           +  L   +  Y       A +  + +I   P   N+DYV Y+ G++   +          
Sbjct: 54  QVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVIYMRGLTNMALDDSALQGFFG 113

Query: 149 ----PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
                 D +  +   +  S++V  Y  S Y   A   +   +++L+  E+ + +YY KRG
Sbjct: 114 VDRSDRDPQHARDAFRDFSKLVRGYPQSQYSTDATKRLVYLKDRLSKYELSVAQYYTKRG 173

Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            +VA + R   +L +Y D +   E +  +  AY  L L  +A +V  +I   
Sbjct: 174 AWVAVVNRVDGMLRDYPDTQATHEGLGLMENAYRELQLNAQADKVAKIIAAN 225


>gi|88707053|ref|ZP_01104749.1| competence lipoprotein ComL family protein [Congregibacter
           litoralis KT71]
 gi|88698703|gb|EAQ95826.1| competence lipoprotein ComL family protein [Congregibacter
           litoralis KT71]
          Length = 303

 Score =  261 bits (669), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 57/235 (24%), Positives = 104/235 (44%), Gaps = 15/235 (6%)

Query: 35  LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94
           + G       D+  DS      ++++Y++A  +L  +NF  +          +PF   A 
Sbjct: 27  IGGCAGNDEEDISADSG-----EQQIYDEAQRYLNARNFDLSIRALQALESRYPFGKYAE 81

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP----- 149
           ++ L   +  Y A   + A    + +I  +P+  NVDY YY+ G++ A   +D       
Sbjct: 82  QAQLELIYAHYGAFSPEAAIEAADRFIRLHPQHPNVDYAYYMKGLATATASQDFLSRFTP 141

Query: 150 -----YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
                 D    K      S++V R+ +SPY   A+  +   RN LA  E+ +  YY +RG
Sbjct: 142 TDKTLRDTSFAKEAFAEFSQLVTRFPDSPYAADAKSRMVYLRNLLARNEIHVANYYFRRG 201

Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            Y+AA  R + V+ N+       + +A + + Y+ L + D A+  +  +   +P 
Sbjct: 202 AYLAAANRGRYVVENFQRTPAVGDGLAVMAQGYLLLGMDDLAKNAIDTLALNFPD 256


>gi|34580817|ref|ZP_00142297.1| hypothetical protein [Rickettsia sibirica 246]
 gi|28262202|gb|EAA25706.1| unknown [Rickettsia sibirica 246]
          Length = 251

 Score =  261 bits (669), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 68/242 (28%), Positives = 125/242 (51%), Gaps = 6/242 (2%)

Query: 30  IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
           +    L G + + + D  +  +        +Y + +  L+++ +  A E F +     P 
Sbjct: 12  VIGLVLGGCKNKKNSDDIVVPIA------TLYNEGITLLEKKKYKNAAEEFGRVLYQHPG 65

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
             +  ++ LM A+  + A +Y++A  + + +I  +P + ++ Y YYL  +SY  +I DV 
Sbjct: 66  NEMTPQAELMQAYSLFLAAQYEEAVDVLDMFIKLHPANVDIAYAYYLKALSYYMLISDVN 125

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
           +DQ  T L       ++ ++ N+ Y   +   + +  + LA KE+ +GR+YLK+   +AA
Sbjct: 126 HDQSRTFLAKDSFEDVIAKFPNTKYAIDSSLKIDLVNDHLAGKEMMVGRFYLKKKNPMAA 185

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
           I RF+ V+ NY    H+ EA+ RL E+Y+ L L DEA++  S++   YP   W  Y   L
Sbjct: 186 INRFEEVIDNYQTTSHSVEALYRLAESYMMLGLPDEAKKYASVLGYNYPDSQWYSYAYRL 245

Query: 270 VK 271
           V+
Sbjct: 246 VQ 247


>gi|229586426|ref|YP_002844927.1| DNA uptake lipoprotein [Rickettsia africae ESF-5]
 gi|228021476|gb|ACP53184.1| DNA uptake lipoprotein [Rickettsia africae ESF-5]
          Length = 251

 Score =  261 bits (669), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 68/242 (28%), Positives = 125/242 (51%), Gaps = 6/242 (2%)

Query: 30  IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
           +    L G + + + D  +  +        +Y + +  L+++ +  A E F +     P 
Sbjct: 12  VIGLVLGGCKNKKNSDDIVVPIA------TLYNEGITLLEKKKYKNAAEEFGRVLYQHPG 65

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
             +  ++ LM A+  + A +Y++A  + + +I  +P + ++ Y YYL  +SY  +I DV 
Sbjct: 66  NEMTPQAELMQAYSLFLAAQYEEAVDVLDMFIKLHPANVDIAYAYYLKALSYYMLISDVN 125

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
           +DQ  T L       ++ ++ N+ Y   +   + +  + LA KE+ +GR+YLK+   +AA
Sbjct: 126 HDQSRTFLAKDSFEDVIAKFPNTKYAIDSSLKIDLVNDHLAGKEMTVGRFYLKKKNPMAA 185

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
           I RF+ V+ NY    H+ EA+ RL E+Y+ L L DEA++  S++   YP   W  Y   L
Sbjct: 186 INRFEEVIDNYQTTSHSVEALYRLAESYMMLGLPDEAKKYASVLGYNYPDSQWYSYAYRL 245

Query: 270 VK 271
           V+
Sbjct: 246 VQ 247


>gi|325129837|gb|EGC52644.1| competence lipoprotein comL [Neisseria meningitidis OX99.30304]
          Length = 256

 Score =  261 bits (668), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 58/245 (23%), Positives = 108/245 (44%), Gaps = 11/245 (4%)

Query: 33  CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
             L     Q + D     +T      ++Y +A   L   N+++A + +      FP +  
Sbjct: 1   LALSACATQGTVDKDA-QITQDWSVEKLYAEAQDELNSSNYTRAVKLYEILESRFPTSRH 59

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV---- 148
           AR+S L +A+  Y   +  +A +  E +   +P+  N+DY  YL G+      +      
Sbjct: 60  ARQSQLDTAYAYYKDDEKDKALAAIERFRRLHPQHPNMDYALYLRGLVLFNEDQSFLNKL 119

Query: 149 ------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
                   D +A +   Q  + +V+R+ NS Y   A   +    + L   E+ + RYY+K
Sbjct: 120 ASQDWSDRDPKANREAYQAFAELVQRFPNSKYAADATARMVKLVDALGGNEMSVARYYMK 179

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           RG Y+AA  R Q ++ +Y +  + EE++A L  AY  L     A +   +++  +P+  +
Sbjct: 180 RGAYIAAANRAQKIIGSYQNTRYVEESLAILELAYQKLGKPQLAADTRRVLETNFPKSPF 239

Query: 263 ARYVE 267
             +  
Sbjct: 240 LTHAW 244


>gi|317493977|ref|ZP_07952394.1| outer membrane assembly lipoprotein YfiO [Enterobacteriaceae
           bacterium 9_2_54FAA]
 gi|316918304|gb|EFV39646.1| outer membrane assembly lipoprotein YfiO [Enterobacteriaceae
           bacterium 9_2_54FAA]
          Length = 245

 Score =  261 bits (668), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 15/228 (6%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              SS+D   D+        E+Y  A   L++ NF  A          +PF   +++  L
Sbjct: 19  GCSSSKDAVPDNPP-----SEIYATAQQKLQDGNFKAAITQLEALDNRYPFGPYSQQVQL 73

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDV 148
              +  Y +     A +  + ++   P   N+DYV Y+ G++   +          I   
Sbjct: 74  DLIYAYYKSADLPMAQASIDRFMRLNPTHPNIDYVLYMRGLTDMALDDSALQGFFGIDRS 133

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
             D    +   +  S++V+RY NS Y   A   +   +++LA  E+ + +YY KRG YVA
Sbjct: 134 DRDPEHARQAFRDFSQLVQRYPNSQYSADATKRLVYLKDRLAKYELSVAQYYTKRGAYVA 193

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            + R + +L NY D +   +A+  +  AY  + L  +A +V  +I E 
Sbjct: 194 VVNRVENMLRNYPDTQATRDALPLMENAYKQMNLTAQADKVAKIIAEN 241


>gi|292487318|ref|YP_003530190.1| hypothetical protein EAMY_0832 [Erwinia amylovora CFBP1430]
 gi|292900316|ref|YP_003539685.1| lipoprotein [Erwinia amylovora ATCC 49946]
 gi|291200164|emb|CBJ47290.1| putative lipoprotein [Erwinia amylovora ATCC 49946]
 gi|291552737|emb|CBA19782.1| UPF0169 lipoprotein PD_1756 precursor [Erwinia amylovora CFBP1430]
          Length = 243

 Score =  261 bits (668), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 92/228 (40%), Gaps = 15/228 (6%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
               SRD   DS        E+Y  A   L++ NF  A          +PF   +++  L
Sbjct: 19  GCSGSRDGVPDSPP-----SEIYATAQQKLQDGNFKGAITQLEALDNRYPFGPYSQQVQL 73

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDV 148
              +  Y       A +  + ++   P   N+DYV Y+ G++   +          I   
Sbjct: 74  DLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVIYMRGLTDMALDDSALQGFFGIDRS 133

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
             D    +   +  S+++  Y NS Y   AR  +   + +LA  E+ +  +Y KRG YVA
Sbjct: 134 DRDPTHARDAFKDFSQLLRGYPNSQYATDARKRLVFLKERLAKHELSVTEFYTKRGAYVA 193

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            + R + +L +Y D     +A+  +  AY  L L  +A  V  +I   
Sbjct: 194 VVNRVEQMLKDYPDTRATRKALPLMENAYRQLQLNAQAERVAKIIAAN 241


>gi|87199749|ref|YP_497006.1| DNA uptake lipoprotein [Novosphingobium aromaticivorans DSM 12444]
 gi|87135430|gb|ABD26172.1| DNA uptake lipoprotein [Novosphingobium aromaticivorans DSM 12444]
          Length = 268

 Score =  261 bits (668), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 73/222 (32%), Positives = 120/222 (54%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D     R    +Y  A   L   +  +A   F++  R  P++  AR++ LMSAF  Y A 
Sbjct: 37  DVAYVARDVDTLYTAAKERLDRGDSKQAAALFDEVERQHPYSPWARRAQLMSAFSYYVAR 96

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
            Y ++    + +++ +P +K+  Y YYL+ + Y + I DV  DQ+ T+  L  M+ +V R
Sbjct: 97  DYSKSVQSAQRFLSIHPGNKDAPYAYYLIALCYYEQISDVTRDQKITQQALTAMNELVRR 156

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y N+ Y   AR  + +  + LA KE+EIGR Y + G+++A+  RF+ V+  Y    HA E
Sbjct: 157 YPNTDYAADARLKIDLINDHLAGKEMEIGRMYQRSGKWLASSLRFRTVVDKYQTTSHAPE 216

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
           A+ RLVE+Y++L L  EA++  +++   YP   W      L+
Sbjct: 217 ALYRLVESYLSLGLPVEAQKAAAVLGSNYPGSKWYERSFELM 258


>gi|312958893|ref|ZP_07773412.1| competence lipoprotein [Pseudomonas fluorescens WH6]
 gi|311286663|gb|EFQ65225.1| competence lipoprotein [Pseudomonas fluorescens WH6]
          Length = 341

 Score =  261 bits (668), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 56/244 (22%), Positives = 99/244 (40%), Gaps = 16/244 (6%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           +     +                + V +   + E+Y+ A   L   +++ A         
Sbjct: 6   LLLIAILAMTAACSSTK------EVVDENLSEVELYQLAQKDLDNNSYTSATAKLKALES 59

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
            +PF   A ++ L   +  Y   + + A S  E +I  +P+  NVDY YY+ G++     
Sbjct: 60  RYPFGRYADQAQLELIYANYKNAEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQD 119

Query: 146 RDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
             +            D  A +      +++  RY NS Y   A+  +   RN LA+ E+ 
Sbjct: 120 VGLLARFLPLDMTKRDPGAARDSYNEFAQLTSRYPNSRYAPDAKQRMIYLRNLLASYEIH 179

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           +  YYL R  YVAA  R + V+ N+ +     + +A + EAY  L L + A   +  ++ 
Sbjct: 180 VAHYYLTRQAYVAAANRGRYVVENFQETPSVGDGLAVMTEAYQRLHLDELASTSLETLKL 239

Query: 256 RYPQ 259
            YP 
Sbjct: 240 NYPD 243


>gi|330977499|gb|EGH77445.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 256

 Score =  261 bits (668), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 14/229 (6%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
            SS++V  +++++V    E+Y++A   L   +++ A E        +PF   A ++ L  
Sbjct: 18  CSSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLEL 73

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPY 150
            +  Y  G+ + A S  E +I  +P+  NVDY YY+ G++                    
Sbjct: 74  IYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKR 133

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
           D  A +      +++  R+ NS Y   A+  +   RN LA+ E+ +  YYL R  YVAA 
Sbjct: 134 DPGAARDSFNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAA 193

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            R + V+ N+ +     + +A +VE+Y  L L D A   + +++  YP 
Sbjct: 194 NRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242


>gi|311104862|ref|YP_003977715.1| competence lipoprotein ComL [Achromobacter xylosoxidans A8]
 gi|310759551|gb|ADP15000.1| competence lipoprotein ComL [Achromobacter xylosoxidans A8]
          Length = 280

 Score =  261 bits (668), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 58/249 (23%), Positives = 102/249 (40%), Gaps = 14/249 (5%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            +    AV  + G    +S+       T      ++Y  A   +    + +A E      
Sbjct: 21  VVIALFAVMVIAGCGSTNSKYDK----TTNWSAEQLYADAKAEMSSGGWKEARERLTAIE 76

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ- 143
             +PF   A+++LL  A+V +  G+ +QA +  + +   YP     DY  YL G+     
Sbjct: 77  SRYPFGVYAQQALLELAYVNWKDGENEQALAAIDRFQQLYPNHPGTDYALYLKGLINFTP 136

Query: 144 ---------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
                           D +  +      + +++RY +S Y   A   V    N +A  EV
Sbjct: 137 ASAFMSSITGQDPAERDPKGLRASYDAFNELIKRYPDSKYTVDAEKRVAWLVNTIAMNEV 196

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
            + RYY +RG YVAA  R Q V+ ++  A   EEA+  +VE+Y  L + +   +   +  
Sbjct: 197 HVARYYYERGAYVAAANRAQTVITDFEGAPATEEALYLMVESYDKLGMTELKNDSQRVYD 256

Query: 255 ERYPQGYWA 263
           + +P   + 
Sbjct: 257 KNFPNSEFK 265


>gi|308048516|ref|YP_003912082.1| outer membrane assembly lipoprotein YfiO [Ferrimonas balearica DSM
           9799]
 gi|307630706|gb|ADN75008.1| outer membrane assembly lipoprotein YfiO [Ferrimonas balearica DSM
           9799]
          Length = 256

 Score =  261 bits (667), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 54/254 (21%), Positives = 97/254 (38%), Gaps = 14/254 (5%)

Query: 19  LYKFALTIFFSIAVCF-LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           + K   ++  +++  F L        R  Y   V + R    +Y  A   ++  NF+KA 
Sbjct: 1   MRKITGSLLLALSSVFALSACSSTGDRSGY---VVEDRTPEALYADARQAMELGNFTKAS 57

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           +        +PF     +  L   +  Y       A +  + +I   P   ++DYVYY+ 
Sbjct: 58  QVLEALDSRYPFGPHKTQVQLDLIYAYYKLDDSASALANVDRFIRLNPTHPDIDYVYYMR 117

Query: 138 GMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           G+   Q           I     D        +    +V+ Y NS Y   A+  + + +N
Sbjct: 118 GLVNMQADSYLFHDMLGIDRTDRDPSNAVAAFRDFETLVKSYPNSRYAPDAQRRMIMLKN 177

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
           +LA   +++  YY+    +V A  R Q VL  Y      E A+  ++ +Y  L       
Sbjct: 178 RLAEFSLKVAEYYVTMEAWVGAANRAQQVLETYPGTPATERALEIMITSYDELGQEAMRD 237

Query: 248 EVVSLIQERYPQGY 261
             VS+++  +P   
Sbjct: 238 HSVSVLKATFPDNR 251


>gi|238650459|ref|YP_002916311.1| ComL family lipoprotein [Rickettsia peacockii str. Rustic]
 gi|238624557|gb|ACR47263.1| ComL family lipoprotein [Rickettsia peacockii str. Rustic]
          Length = 251

 Score =  261 bits (667), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 68/242 (28%), Positives = 125/242 (51%), Gaps = 6/242 (2%)

Query: 30  IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
           +    L G + + + D  +  +        +Y + +  L+++ +  A E F +     P 
Sbjct: 12  VIGLVLGGCKNKKTSDDIVVPIA------TLYNEGITLLEKKKYKNAAEEFGRVLYQHPG 65

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
             +  ++ LM A+  + A +Y++A  + + +I  +P + ++ Y YYL  +SY  +I DV 
Sbjct: 66  NEMTPQAELMQAYSLFLAAQYEEAVDVLDMFIKLHPANVDIAYAYYLKALSYYMLISDVN 125

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
           +DQ  T L       ++ ++ N+ Y   +   + +  + LA KE+ +GR+YLK+   +AA
Sbjct: 126 HDQSRTFLAKDSFEDVIAKFPNTKYAIDSSLKIDLVNDHLAGKEMMVGRFYLKKKNPMAA 185

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
           I RF+ V+ NY    H+ EA+ RL E+Y+ L L DEA++  S++   YP   W  Y   L
Sbjct: 186 INRFEEVIDNYQTTSHSVEALYRLAESYMILGLPDEAKKYASVLGYNYPDSQWYSYAYRL 245

Query: 270 VK 271
           V+
Sbjct: 246 VQ 247


>gi|254511506|ref|ZP_05123573.1| tetratricopeptide TPR_2 repeat protein [Rhodobacteraceae bacterium
           KLH11]
 gi|221535217|gb|EEE38205.1| tetratricopeptide TPR_2 repeat protein [Rhodobacteraceae bacterium
           KLH11]
          Length = 286

 Score =  261 bits (667), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 70/250 (28%), Positives = 126/250 (50%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           + A  +  +  +         S +    +   +     +++ +    L +     A  YF
Sbjct: 9   RIAGALLLATVLTACGDGGLFSKKGADRNQNLEGYTPEQIFTRGEYELSQDRSDDAAWYF 68

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
           ++  R +P++  A+++L+M AF  ++   Y ++ +  + YI  YP  ++  Y  YL+ +S
Sbjct: 69  SEVERLYPYSDWAKRALIMQAFSYHNDKNYAESRAAAQRYIDFYPTDEDAAYAQYLLALS 128

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
           Y   I +V  DQ  T   LQ +  ++E Y +S Y   A     +  + LA KE+EIGRYY
Sbjct: 129 YYDQIDEVGRDQGLTFQALQALRTVIEVYPDSEYATSAVLKFDLAFDHLAGKEMEIGRYY 188

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           L++  + AAI RF++V+ ++    H  EA+ RL+EAY+AL L+DEA+   +++   Y   
Sbjct: 189 LRQDHFTAAINRFRVVVEDFQTTSHTAEALYRLIEAYLALGLVDEAQTAGAILGYNYQSS 248

Query: 261 YWARYVETLV 270
            W     TL+
Sbjct: 249 EWYDAGYTLL 258


>gi|296116445|ref|ZP_06835059.1| hypothetical protein GXY_11614 [Gluconacetobacter hansenii ATCC
           23769]
 gi|295977038|gb|EFG83802.1| hypothetical protein GXY_11614 [Gluconacetobacter hansenii ATCC
           23769]
          Length = 292

 Score =  261 bits (667), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 64/258 (24%), Positives = 122/258 (47%), Gaps = 3/258 (1%)

Query: 14  AWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF 73
               +L   A  +    A+ FL      S     ++    V     +Y   V  L+   +
Sbjct: 10  LLLRRLGGIAPRLLGLPALAFLAACNGNS---AIMEHAPRVGSAETLYNHGVDALRTNRY 66

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
             A   F+   R++P++     + LM  +  Y   KY +A    + ++  +P S +  Y 
Sbjct: 67  VLATIQFDVLQRNYPYSQYTANAQLMEGYSDYLQSKYPEAVQQLDRFLELHPTSSDAAYA 126

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
           +YL  + Y + + DV  DQ+ T   +  +  ++ R+  +PY + A+  + + R+ LA KE
Sbjct: 127 FYLRALCYYEQVADVQRDQQGTIESMDALEEVITRFPQTPYARDAQLKIDLCRDHLAGKE 186

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           + +GR+Y ++  Y AA+ R+Q V+ ++    H  EA+ RLVE Y+ L L+++AR+  +++
Sbjct: 187 MLVGRFYQEQRNYQAAVNRYQRVVQDFQTTNHVPEALERLVEVYLDLGLLEQARKTGAVL 246

Query: 254 QERYPQGYWARYVETLVK 271
              YP   W       ++
Sbjct: 247 AYNYPDSKWYHDAYDHLR 264


>gi|260426152|ref|ZP_05780131.1| tetratricopeptide TPR_2 repeat protein [Citreicella sp. SE45]
 gi|260420644|gb|EEX13895.1| tetratricopeptide TPR_2 repeat protein [Citreicella sp. SE45]
          Length = 286

 Score =  261 bits (667), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 74/248 (29%), Positives = 128/248 (51%), Gaps = 1/248 (0%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           L I  + +   L G   Q        ++  +     +++E+    L  ++  +A  YF +
Sbjct: 9   LVIGLAFSAIILAGCTAQERDGYAKGNIPLETFSAEQIFERGEYELDRKDGERAAYYFGE 68

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
             R +P++  ++++L+M A+  +    Y+ + S  + YI  YP   +  Y  YL+ +SY 
Sbjct: 69  VERLYPYSDWSKRALIMQAYAYHLEKDYENSRSSAQRYIDFYPTDDDAAYAQYLLALSYY 128

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
             I +V  DQ  T   LQ +  ++ERY +S Y + +     +  + LAAKE+EIGRYYL+
Sbjct: 129 DQIEEVGRDQGLTFQALQALRTVIERYPDSEYARSSILKFDLAFDHLAAKEMEIGRYYLR 188

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           R  Y AAI RF+ V+ ++    H  EA+ RLVEAY++L L++EA+   +++   Y    W
Sbjct: 189 RQHYGAAINRFRSVVEDFQTTTHTPEALHRLVEAYLSLGLVNEAQTAGAILGYNYQGTVW 248

Query: 263 ARYVETLV 270
                 L+
Sbjct: 249 YADTYALL 256


>gi|323497825|ref|ZP_08102839.1| putative lipoprotein [Vibrio sinaloensis DSM 21326]
 gi|323317172|gb|EGA70169.1| putative lipoprotein [Vibrio sinaloensis DSM 21326]
          Length = 241

 Score =  261 bits (667), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 59/242 (24%), Positives = 102/242 (42%), Gaps = 17/242 (7%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
           T+   +A+  LVG    SS ++  D         E+Y +A + L+  N+  A        
Sbjct: 5   TLSGLLALSVLVGCS--SSEEIVPDVPP-----SELYSEAQISLQSGNWLSAISQLEALD 57

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
             +PF   + +  L   +  Y         +  E +    P  + +D+V Y+ G+++   
Sbjct: 58  SRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIERFTRLNPTHEKLDWVLYMRGLTHMAQ 117

Query: 145 IRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
            R+             D    K       R++ERY  SPY + A+  +   +N+LA  ++
Sbjct: 118 DRNFMHDLFNVDRSDRDPEPVKKAFADFKRLLERYPTSPYAEDAQKRMLALKNRLAEYDL 177

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
               +YL+R  ++AAI R Q +   Y D   A E++   +EAY AL L D  +    LI+
Sbjct: 178 ATADFYLRREAWIAAINRTQELQKTYPDTVAARESLQIQLEAYKALGLEDAIKRTQQLIE 237

Query: 255 ER 256
             
Sbjct: 238 LN 239


>gi|311278475|ref|YP_003940706.1| outer membrane assembly lipoprotein YfiO [Enterobacter cloacae
           SCF1]
 gi|308747670|gb|ADO47422.1| outer membrane assembly lipoprotein YfiO [Enterobacter cloacae
           SCF1]
          Length = 245

 Score =  261 bits (667), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 93/228 (40%), Gaps = 15/228 (6%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
               S++   D+        E+Y  A   L++ N+ +A          +PF   +++  L
Sbjct: 19  GCSGSKEEVPDNPP-----NEIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQL 73

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV---------- 148
              +  Y       A +  + ++   P   N+DYV Y+ G++   +              
Sbjct: 74  DLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVIYMRGLTNMALDDSALQGFFGVDRS 133

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
             D +  +      +++V  Y  S Y   A   +   +++LA  E+ +  YY  RG +VA
Sbjct: 134 DRDPQHARDAFNDFTKLVRGYPQSQYATDAYKRMVFLKDRLAKYELSVVDYYTDRGAWVA 193

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            + R + +L +Y D +   +A+ ++  AY  + +  +A +V  +I   
Sbjct: 194 VVNRVEGMLRDYPDTQATRDALPKMENAYRQMQMNAQADKVAKIIAAN 241


>gi|86137669|ref|ZP_01056246.1| competence lipoprotein ComL, putative [Roseobacter sp. MED193]
 gi|85826004|gb|EAQ46202.1| competence lipoprotein ComL, putative [Roseobacter sp. MED193]
          Length = 282

 Score =  261 bits (667), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 76/250 (30%), Positives = 128/250 (51%), Gaps = 4/250 (1%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           KF        A+    G    + + V L+S T     ++++E+    L       A  YF
Sbjct: 9   KFVSAALLMAALSGCGGDGGAADQTVPLESYT----PQQIFERGEFELARSRTKDAAFYF 64

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
           ++  R +P++  A+++L+M AF  + +  Y+ +    + +I  YP  ++  Y  YL+ +S
Sbjct: 65  SEIERLYPYSEFAKQALIMQAFANHQSKDYEASRGAAQRFIDFYPTDEDAAYAQYLLALS 124

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
           Y   I +V  DQ  T   LQ +  ++E Y +S Y   A     +  + LA KE+EIGRYY
Sbjct: 125 YYDQIDEVGRDQGLTFQALQSLRTVIEVYPDSEYATSAILKFDLAFDHLAGKEMEIGRYY 184

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           L+RG Y +AI RF++V+ ++    H  EA+ RLVEAY++L L +EA+   +++   Y   
Sbjct: 185 LRRGHYTSAISRFRVVVEDFQTTSHTAEALHRLVEAYLSLGLTEEAQTAGAILGHNYQST 244

Query: 261 YWARYVETLV 270
            W      L+
Sbjct: 245 DWYEDSYKLL 254


>gi|239501206|ref|ZP_04660516.1| DNA uptake lipoprotein [Acinetobacter baumannii AB900]
          Length = 385

 Score =  260 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 57/253 (22%), Positives = 110/253 (43%), Gaps = 14/253 (5%)

Query: 17  YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
           Y++   AL++  + A    VG     S+   +D+      ++  ++KA   L    +  A
Sbjct: 6   YKITMLALSLGVASAF---VGCSSNPSKKEVVDTGPQ-SSEQAYFDKAQKALDRGQYLDA 61

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            +        +P    A+++ L   + ++    Y+ A +L E +I   P+  NVDY YY+
Sbjct: 62  TKSLEAIDTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYV 121

Query: 137 VGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
            G+S  +M          ++    D    K+  Q    ++ R+ +S Y   A   +    
Sbjct: 122 RGVSNMEMNYDSLLRYTSLQQSHRDVSYLKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIG 181

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
            +LA  E+   R+ +KR  ++AA  R Q V+ +Y       EA+A L  +Y  L     +
Sbjct: 182 QELAESEMNAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYDQLGDKATS 241

Query: 247 REVVSLIQERYPQ 259
           ++ + +++  YP 
Sbjct: 242 QQYIEVLKLNYPS 254


>gi|299771332|ref|YP_003733358.1| DNA uptake lipoprotein [Acinetobacter sp. DR1]
 gi|298701420|gb|ADI91985.1| DNA uptake lipoprotein [Acinetobacter sp. DR1]
          Length = 387

 Score =  260 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 57/253 (22%), Positives = 108/253 (42%), Gaps = 14/253 (5%)

Query: 17  YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
           Y++   AL++  + A    VG     S+   +DS      ++  +EKA   L    +  A
Sbjct: 6   YKITMLALSLGVASAF---VGCSSNPSKKEVVDSGPQ-SSEQAYFEKAQKSLDRGQYLDA 61

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            +        +P    A+++ L   + ++    Y+ A +L E +I   P+  NVDY YY+
Sbjct: 62  TKSLEAIDTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYV 121

Query: 137 VGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
             +S  +           ++    D    K+  Q    ++ R+ +S Y   A   +    
Sbjct: 122 RAVSNMEQNYDSLMRYTSLQQSHRDVSYLKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIG 181

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
            +LA  E+   R+ +KR  ++AA  R Q V+ +Y       EA+A L  +Y  L     +
Sbjct: 182 QELAENEMTAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYNQLGDKATS 241

Query: 247 REVVSLIQERYPQ 259
           ++ + +++  YP 
Sbjct: 242 QQYIEVLKLNYPN 254


>gi|15892153|ref|NP_359867.1| hypothetical protein RC0230 [Rickettsia conorii str. Malish 7]
 gi|15619283|gb|AAL02768.1| unknown [Rickettsia conorii str. Malish 7]
          Length = 251

 Score =  260 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 68/242 (28%), Positives = 125/242 (51%), Gaps = 6/242 (2%)

Query: 30  IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
           +    L G + + + D  +  +        +Y + +  L+++ +  A E F +     P 
Sbjct: 12  VIGLVLGGCKNKKNSDDIVVPIA------TLYNEGITLLEKKKYKNAAEEFGRVLYQHPG 65

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
             +  ++ LM A+  + A +Y++A  + + +I  +P + ++ Y YYL  +SY  +I DV 
Sbjct: 66  NEMTPQAELMQAYSLFLAAQYEEAVDVLDMFIKLHPANVDIAYAYYLKALSYYMLISDVN 125

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
           +DQ  T L       ++ ++ N+ Y   +   + +  + LA KE+ +GR+YLK+   +AA
Sbjct: 126 HDQSRTFLAKDSFEDVIAKFPNTKYAIDSSLKIDLVNDHLAGKEMMVGRFYLKKKNPMAA 185

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
           I RF+ V+ NY    H+ EA+ RL E+Y+ L L DEA++  S++   YP   W  Y   L
Sbjct: 186 INRFEEVIDNYQTTSHSVEALYRLAESYMMLGLSDEAKKYASVLGYNYPDSQWYSYAYRL 245

Query: 270 VK 271
           V+
Sbjct: 246 VQ 247


>gi|260434236|ref|ZP_05788207.1| tetratricopeptide TPR_2 repeat protein [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260418064|gb|EEX11323.1| tetratricopeptide TPR_2 repeat protein [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 287

 Score =  260 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 73/248 (29%), Positives = 127/248 (51%), Gaps = 1/248 (0%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           A+ +  ++  C   G     ++        +     +++ +    L +     A  YF++
Sbjct: 13  AILLALTLTACGNAG-GLFGNKGADRSQNLEGYTPEQIFTRGEFELSQNRPEDAAWYFSE 71

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
             R +P++  A++SL+M AF  +S   Y+++ +  + YI  YP  ++  Y  YL+ +SY 
Sbjct: 72  VERLYPYSDWAKRSLIMQAFAFHSDKNYEESRAAAQRYIDFYPTDEDAAYAQYLLALSYY 131

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
             I +V  DQ  T   LQ +  ++E Y +S Y   A     +  + LA KE+EIGRYYL+
Sbjct: 132 DQIDEVGRDQGLTFQALQALRTVIEVYPDSEYATSAVLKFDLAFDHLAGKEMEIGRYYLR 191

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           +  Y AAI RF++V+ ++    H  EA+ RL+EAY+AL L+DEA+   +++   Y    W
Sbjct: 192 QDHYAAAINRFRVVVEDFQTTTHTAEALYRLIEAYLALGLVDEAQSAGAILGYNYQSSEW 251

Query: 263 ARYVETLV 270
                 L+
Sbjct: 252 YDAAYKLL 259


>gi|157828109|ref|YP_001494351.1| hypothetical protein A1G_01315 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165932811|ref|YP_001649600.1| ComL family lipoprotein [Rickettsia rickettsii str. Iowa]
 gi|157800590|gb|ABV75843.1| hypothetical protein A1G_01315 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165907898|gb|ABY72194.1| lipoprotein, ComL family [Rickettsia rickettsii str. Iowa]
          Length = 251

 Score =  260 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 69/242 (28%), Positives = 126/242 (52%), Gaps = 6/242 (2%)

Query: 30  IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
           +    L G + + + D  +  +        +Y + +  L+++ +  A E F +     P 
Sbjct: 12  VIGLVLGGCKNKKTSDDIVVPIA------TLYNEGITLLEKKKYKNAAEEFGRVLYQHPG 65

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
             +  ++ LM A+  + A +Y++A  + + +IT +P + ++ Y YYL  +SY  +I DV 
Sbjct: 66  NEMTPQAELMQAYSLFLAAQYEEAVDVLDMFITLHPANVDIAYAYYLKALSYYMLISDVN 125

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
           +DQ  T L       ++ ++ N+ Y   +   + +  + LA KE+ +GR+YLK+   +AA
Sbjct: 126 HDQSRTFLAKDSFEDVIAKFPNTKYAIDSSLKIDLVNDHLAGKEMMVGRFYLKKKNPMAA 185

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
           I RF+ V+ NY    H+ EA+ RL E+Y+ L L DEA++  S++   YP   W  Y   L
Sbjct: 186 INRFEEVIDNYQTTSHSVEALYRLAESYMILGLPDEAKKYASVLGYNYPDSQWYSYAYRL 245

Query: 270 VK 271
           V+
Sbjct: 246 VQ 247


>gi|262373261|ref|ZP_06066540.1| competence lipoprotein comL [Acinetobacter junii SH205]
 gi|262313286|gb|EEY94371.1| competence lipoprotein comL [Acinetobacter junii SH205]
          Length = 365

 Score =  260 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 55/253 (21%), Positives = 108/253 (42%), Gaps = 14/253 (5%)

Query: 17  YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
           Y++   AL++  + A    VG     S+   +D       ++  +EKA   L    ++ A
Sbjct: 6   YKITMLALSLGVASAF---VGCSSNPSKKEVVDKGPQ-SSEQVYFEKAQKSLDRNQYTDA 61

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            +        +P     +++ L   + ++    Y+   +L E +I   P+  NVDY YY+
Sbjct: 62  VKSLEALDTYYPTGRYTQQAQLELLYAKFKQKDYEGTIALAERFIRLNPQHPNVDYAYYV 121

Query: 137 VGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
            G++  +M          ++    D    K+  Q    ++ R+ +S Y   A   +    
Sbjct: 122 RGVANMEMNYDSLIRYTSLQQSHRDVSYVKVAYQNFVDLIRRFPSSKYSVDAAQRMKFIG 181

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
            +LA  E+   R+ ++R  ++AA  R Q V+ +Y       EA+A L  +Y  L     A
Sbjct: 182 QELAESEMNAARFNIQRKAWLAAAERAQWVIEHYPQTPQTPEALATLAYSYQKLGDNSTA 241

Query: 247 REVVSLIQERYPQ 259
           ++ + +++  YP 
Sbjct: 242 QQYIEILKLNYPN 254


>gi|89055239|ref|YP_510690.1| competence lipoprotein ComL, putative [Jannaschia sp. CCS1]
 gi|88864788|gb|ABD55665.1| competence lipoprotein ComL putative [Jannaschia sp. CCS1]
          Length = 302

 Score =  260 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 70/218 (32%), Positives = 114/218 (52%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
             +      +Y++A   L+      A E F +  R  P++  A ++L+M+AF  +  G Y
Sbjct: 55  PLEQLDAETIYQQAEFELERGRADNAAELFIEVERLHPYSAWAERALIMAAFAYHEDGDY 114

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           + A    + Y+  YP +++  Y  YL+ +SY   I  V  DQ  T   LQ +  ++ERY 
Sbjct: 115 EAARVAAQRYLDFYPGNEDAAYAQYLLALSYYDQIDQVGRDQGVTFQALQALRVVIERYP 174

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
           +S YV+ A     +  + LA KE+E+GRYYL+R  Y +AI RF++V+  +    H  EA+
Sbjct: 175 DSDYVQDAILRFDLAFDHLAGKEMEVGRYYLRREHYTSAINRFRVVVEEFQTTSHTPEAL 234

Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
            RLVEAY+AL L DEA+   +++   +    +      
Sbjct: 235 LRLVEAYLALGLTDEAQTAGAILGYNFQSSPFYDDAFR 272


>gi|91794215|ref|YP_563866.1| putative lipoprotein [Shewanella denitrificans OS217]
 gi|91716217|gb|ABE56143.1| putative lipoprotein [Shewanella denitrificans OS217]
          Length = 253

 Score =  260 bits (665), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 50/253 (19%), Positives = 98/253 (38%), Gaps = 14/253 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +YKFA      +    +               + + +    +Y +A   ++  N+SKA  
Sbjct: 1   MYKFAKGAALVMLSLAITACSSSPED----ADIANKKSPEALYAQARTSMELGNYSKAAR 56

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF     +  L   F  Y         +  + ++   P   N+DYV+Y+ G
Sbjct: 57  SLEALDSRYPFGPHKTQVQLDLIFAYYKMDDAASGLANIDRFLRLNPTHPNIDYVHYMRG 116

Query: 139 MSYAQ----------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++  Q           I     D +  +   +   ++++ Y NS Y   A+  +   +N+
Sbjct: 117 LTNMQADNYLFHDMLDIDRTDRDTKNAQDAFKDFDKLIKSYPNSKYAADAQQRMQYLKNR 176

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA   V +  YY+K   + AA  R Q V+  + +    E A+  + EAY  L      + 
Sbjct: 177 LANYSVIVAEYYIKMNAWSAAAVRAQTVMEKFPNTPSTERALEIMAEAYQELGQTQLKQN 236

Query: 249 VVSLIQERYPQGY 261
           V+++++  +P   
Sbjct: 237 VLTVLKANFPSNE 249


>gi|237809511|ref|YP_002893951.1| outer membrane assembly lipoprotein YfiO [Tolumonas auensis DSM
           9187]
 gi|237501772|gb|ACQ94365.1| outer membrane assembly lipoprotein YfiO [Tolumonas auensis DSM
           9187]
          Length = 253

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 57/257 (22%), Positives = 112/257 (43%), Gaps = 17/257 (6%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
             ++ +F   +  S+++  L G    S +    D   +V     +Y++A   L   ++ +
Sbjct: 1   MQKVVRFFPVMLLSLSL--LAGCSSSSDKPKVPDEPLEV-----LYKQAQSKLHNGDYER 53

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A +        +PF   A +  L   +  Y      QA +  + ++   P  K+VDYVYY
Sbjct: 54  AVDILEALDSRYPFGPYASQVQLQLIYAYYKKEDTAQAIANIDRFLRLNPTHKDVDYVYY 113

Query: 136 LVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           + G++  Q           I     D +  +   +    +++ Y +S Y   AR      
Sbjct: 114 MRGLANMQEDYNFFHDKFGIDRSDRDPQYARQAFKDFQLVLKNYPDSLYASDARARAVYL 173

Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
           +N+LA  ++ I  +Y++R  +V+A  R + ++ NY D E  + A+  +V+AY  + L D 
Sbjct: 174 KNRLAKFDLAIADFYMRREAWVSAANRAKYLIENYPDTEMTQPALEIMVQAYEKMDLTDL 233

Query: 246 AREVVSLIQERYPQGYW 262
           A+    ++   YP   +
Sbjct: 234 AKHARQMLSTNYPDSEY 250


>gi|45403|emb|CAA78141.1| putative protein of no known function [Pseudomonas aeruginosa PAO1]
          Length = 341

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 63/229 (27%), Positives = 105/229 (45%), Gaps = 10/229 (4%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           ++V +   + ++Y++A   L  ++++ A          +PF   A ++ L   +  Y   
Sbjct: 23  ETVDENLSESQLYQQAQDDLNNKSYNSAVTKLKALESRYPFGRYAEQAQLELIYANYKNM 82

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLM 158
           + + A +  E +I  +P+  NVDY YYL G+S     R +            D  A +  
Sbjct: 83  EPEAARAAAERFIRLHPQHPNVDYAYYLKGLSSFDQDRGLLARFLPLDMTKRDPGAARDS 142

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
               +++  R  NS Y   A+  +   RN LAA EV +G YYLKR  YVAA  R + V+ 
Sbjct: 143 FNEFAQLTSRLPNSRYAPDAKARMVYLRNLLAAYEVHVGHYYLKRQAYVAAANRGRYVVE 202

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
           N+ +     + +A +VEAY  L L D A   +  ++  YP     +  E
Sbjct: 203 NFQETPAVGDGLAIMVEAYRRLGLDDLASTSLETLKLNYPDNASLKDGE 251


>gi|217979600|ref|YP_002363747.1| outer membrane assembly lipoprotein YfiO [Methylocella silvestris
           BL2]
 gi|217504976|gb|ACK52385.1| outer membrane assembly lipoprotein YfiO [Methylocella silvestris
           BL2]
          Length = 288

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 81/229 (35%), Positives = 129/229 (56%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
           S D Y   +       ++Y + +  LK +++  A + F    + +P++   RK L+M+ F
Sbjct: 36  SGDKYKPEILKDTPAEDLYNQGLARLKVRDYPAAAKSFAALDKQYPYSQWQRKGLIMTTF 95

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
            QY AG Y+ A    + YI  +P++ +VDY YYL  MSY   I D+  DQ  +       
Sbjct: 96  AQYQAGSYEDAIGSAKRYIGLFPQAADVDYAYYLEAMSYYNQIPDISRDQDRSAKAADLF 155

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
           ++I+E+Y  S YV  +R+ + V R+QLA KE+ +GR+YL +  YVAA+ RF+ VLA Y  
Sbjct: 156 AQIIEKYPKSEYVDDSRYKLQVTRDQLAGKEMMVGRFYLNQRNYVAAVGRFREVLAKYQT 215

Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
             HAEEA+ RL EAY+AL +  EA+   +++   +P   W +    L++
Sbjct: 216 TRHAEEALMRLTEAYLALGVPQEAQTAAAILGHNFPDSVWYKDAYALLR 264


>gi|118590884|ref|ZP_01548284.1| putative lipoprotein [Stappia aggregata IAM 12614]
 gi|118436406|gb|EAV43047.1| putative lipoprotein [Stappia aggregata IAM 12614]
          Length = 270

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 62/230 (26%), Positives = 123/230 (53%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
              +D   +   +      ++ + +    +     + + F +  + +P++  ++KSL+  
Sbjct: 19  CGGKDDLDELALNDTPPEVLFNEGLSLRAQGKLRDSAQKFEELDKLYPYSEYSKKSLVNL 78

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           AF+ YS GKY +  +  + ++T YP  ++  Y+ YL G +Y + + D+  DQ  T+    
Sbjct: 79  AFLNYSRGKYTETVTAAKRFVTLYPGDEDSAYMLYLAGQAYFRQMPDITRDQAVTRKAAG 138

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
             + +++R+  S YV  A   + +  +QL  KE+++GR+YL++  Y+A I RF+ V+ +Y
Sbjct: 139 AFNELIQRFPESEYVPDAESKLRIVHDQLGGKEMQVGRFYLQKRNYIAGINRFKTVVVDY 198

Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
               H EEA+ RL EAY AL +++EA+   +++   YP   W +   +L+
Sbjct: 199 QTTRHVEEALFRLTEAYYALGVVNEAQTAAAVLGHNYPDSQWYKDAYSLL 248


>gi|312171424|emb|CBX79683.1| UPF0169 lipoprotein PD_1756 precursor [Erwinia amylovora ATCC
           BAA-2158]
          Length = 243

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 91/228 (39%), Gaps = 15/228 (6%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
               SRD   DS        E+Y  A   L++ NF  A          +PF   +++  L
Sbjct: 19  GCSGSRDGVPDSPP-----SEIYATAQQKLQDGNFKGAITQLEALDNRYPFGPYSQQVQL 73

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDV 148
              +  Y       A +  + ++   P   N+DYV Y+ G++   +          I   
Sbjct: 74  DLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVIYMRGLTDMALDDSALQGFFGIDRS 133

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
             D    +   +  S+++  Y NS Y   AR  +   + +LA  E+ +  +Y  RG YVA
Sbjct: 134 DRDPTHARDAFKDFSQLLRGYPNSQYATDARKRLVFLKERLAKHELSVTEFYTNRGAYVA 193

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            + R + +L +Y D     +A+  +  AY  L L  +A  V  +I   
Sbjct: 194 VVNRVEQMLKDYPDTRATRKALPLMENAYRQLQLNAQAERVAKIIAAN 241


>gi|114321698|ref|YP_743381.1| putative lipoprotein [Alkalilimnicola ehrlichii MLHE-1]
 gi|114228092|gb|ABI57891.1| putative lipoprotein [Alkalilimnicola ehrlichii MLHE-1]
          Length = 254

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 60/235 (25%), Positives = 104/235 (44%), Gaps = 17/235 (7%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
            G           +   +     E+Y++A   L+  N++ A E   +    FPF   A +
Sbjct: 20  GGCSSNG-----PERQEEQATAEELYQQARRQLENGNYTMAVETLERLQGRFPFGPFATQ 74

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY-----------AQM 144
           + L   +  Y AG+ +   +  + ++  YP   NV Y  Y+ G++              +
Sbjct: 75  AQLDIIYAYYQAGELESTIAAADRFMRLYPRDPNVAYARYMRGLANAGVGDEFFTRVFNL 134

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
            R +  D +  +        +++R+ +S YV  AR  +   R+ LA  E+ + R+YL+R 
Sbjct: 135 DRSL-RDPQPLRRAFVDFRELIQRHPDSEYVDDARERMQEIRDLLARHEIYVARFYLRRD 193

Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
             VAA+ R + VL  Y      E+A+  LVEAY  L L D  ++V  +I E +P 
Sbjct: 194 APVAAVGRARTVLQEYQGTGAVEDALEVLVEAYGMLELADLQQDVRRVIGENFPG 248


>gi|330501970|ref|YP_004378839.1| DNA uptake lipoprotein-like protein [Pseudomonas mendocina NK-01]
 gi|328916256|gb|AEB57087.1| DNA uptake lipoprotein-like protein [Pseudomonas mendocina NK-01]
          Length = 330

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 10/221 (4%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             V +   + E+Y++A   L  +++++A          +PF   A ++ L   +  Y   
Sbjct: 23  PEVDENLSEVELYQQAQADLDNRSYTQAIAKLKALESRYPFGRYAEQAQLELIYAYYKNA 82

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLM 158
           + + A S  E +I  +P+  NVDY YYL G++     R +            D  A +  
Sbjct: 83  EPEAAKSSAERFIRLHPQHANVDYAYYLKGLASFDQDRGLLARFLPLDMTKRDPGAARDS 142

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
               +++  RY  S Y   A+  +   RN LAA E+ +G YYL R  YVAA  R + V+ 
Sbjct: 143 YNEFAQLTSRYPTSRYAPDAKQRMIYLRNLLAAYEIHVGHYYLTRQAYVAAANRGRYVVE 202

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           N+ +     + +A + EAY  L+L D A   +  ++  YP 
Sbjct: 203 NFQETPSVGDGLAIMTEAYQRLSLDDLAATSLETLKLNYPD 243


>gi|184157113|ref|YP_001845452.1| DNA uptake lipoprotein [Acinetobacter baumannii ACICU]
 gi|183208707|gb|ACC56105.1| DNA uptake lipoprotein [Acinetobacter baumannii ACICU]
          Length = 385

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 57/253 (22%), Positives = 110/253 (43%), Gaps = 14/253 (5%)

Query: 17  YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
           Y++   AL++  + A    VG     S+   +D+      ++  ++KA   L    +  A
Sbjct: 6   YKITMLALSLGVASAF---VGCSSNPSKKEVVDTGPQ-SSEQAYFDKAQKALDRGQYLDA 61

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            +        +P    A+++ L   + ++    Y+ A +L E +I   P+  NVDY YY+
Sbjct: 62  TKSLEAIDTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYV 121

Query: 137 VGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
            G+S  +M          ++    D    K+  Q    ++ R+ +S Y   A   +    
Sbjct: 122 RGVSNMEMNYDSLLRYTSLQQSHRDVSYLKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIG 181

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
            +LA  E+   R+ +KR  ++AA  R Q V+ +Y       EA+A L  +Y  L     +
Sbjct: 182 QELAESEMNAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYDQLGDKATS 241

Query: 247 REVVSLIQERYPQ 259
           ++ + +++  YP 
Sbjct: 242 QQYIEVLKLNYPS 254


>gi|146306003|ref|YP_001186468.1| DNA uptake lipoprotein-like protein [Pseudomonas mendocina ymp]
 gi|145574204|gb|ABP83736.1| DNA uptake lipoprotein-like protein [Pseudomonas mendocina ymp]
          Length = 330

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 63/221 (28%), Positives = 101/221 (45%), Gaps = 10/221 (4%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             V +   + E+Y +A   L  +++++A          +PF   A ++ L   +  Y   
Sbjct: 23  PEVDENLSEVELYRQAQADLDNRSYTQAIAKLKALESRYPFGRYAEQAQLELIYAYYKNV 82

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLM 158
           + + A S  E +I  +P+  NVDY YYL G++     R +            D  A +  
Sbjct: 83  EPEAAKSSAERFIRLHPQHANVDYAYYLKGLASFDQDRGLLARFLPLDMTKRDPGAARDS 142

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
               +++  RY  S Y   A+  +   RN LAA EV +G YYLKR  YVAA  R + V+ 
Sbjct: 143 YNEFAQLTSRYPTSRYAPDAKQRMIYLRNLLAAYEVHVGHYYLKRQAYVAAANRGRYVVE 202

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           N+ +     + +A + EAY  LAL D A   +  ++  YP 
Sbjct: 203 NFQETPAVGDGLAIMTEAYQRLALNDLAATSLETLKLNYPD 243


>gi|58038651|ref|YP_190615.1| lipoprotein [Gluconobacter oxydans 621H]
 gi|58001065|gb|AAW59959.1| Hypothetical lipoprotein [Gluconobacter oxydans 621H]
          Length = 299

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 66/253 (26%), Positives = 123/253 (48%), Gaps = 6/253 (2%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           L   A++ F  ++ C L   + +        ++        +Y   +  L   ++  A  
Sbjct: 20  LRAAAVSGFLLLSGCSLFSHQHEK------PAIPKTADAETLYNYGIDALHTGHYELAGG 73

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            F    +++P++G    + LM  +  Y  G+Y  +    E Y+  +P S +  Y +YL  
Sbjct: 74  EFELLQQNYPYSGFTGNAELMEGYAYYLQGEYALSVQQLERYLQLHPTSPDAAYAFYLRA 133

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           + Y + I +V  DQ+ T   L  +  ++ R+  + Y + A+  + + R+ LA KE+ +GR
Sbjct: 134 LCYYEQIANVERDQQGTVEALDALEEVITRFPQTSYARDAQLKIDLCRDHLAGKEMLVGR 193

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           +Y ++  Y AA+ R+Q V+ +Y    H  EA+ RLVE Y+AL L D+A +  +++   YP
Sbjct: 194 WYQQQRNYEAAMTRYQRVVQDYQTTNHVAEALERLVEVYLALGLKDQAHQTAAVLGYNYP 253

Query: 259 QGYWARYVETLVK 271
              W RY    ++
Sbjct: 254 DSQWYRYAYNDLR 266



 Score = 37.0 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 21/150 (14%), Positives = 45/150 (30%), Gaps = 25/150 (16%)

Query: 60  VYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS--------------AFVQ 104
            YE+ A +   +Q   +A +   +    FP    AR + L                    
Sbjct: 136 YYEQIANVERDQQGTVEALDALEEVITRFPQTSYARDAQLKIDLCRDHLAGKEMLVGRWY 195

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
                Y+ A +  +  +  Y  + +V            + + +V           Q  + 
Sbjct: 196 QQQRNYEAAMTRYQRVVQDYQTTNHVAEAL--------ERLVEVYLALGLKDQAHQTAAV 247

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
           +   Y +S + + A   +    N L   ++
Sbjct: 248 LGYNYPDSQWYRYAYNDLRE--NHLLKSDL 275


>gi|126726631|ref|ZP_01742471.1| Putative ComL lipoprotein [Rhodobacterales bacterium HTCC2150]
 gi|126703960|gb|EBA03053.1| Putative ComL lipoprotein [Rhodobacterales bacterium HTCC2150]
          Length = 278

 Score =  259 bits (663), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 75/251 (29%), Positives = 131/251 (52%), Gaps = 4/251 (1%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
            K    +   + +  +    R  +++   D++      R ++  A   L+E+   KA + 
Sbjct: 4   KKTLHIVGGVLMLASVTACSRLGNKEPVYDNLP----ARSIFTLAEQKLEEKEPEKAAKI 59

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
           F +  R +P++ +A+++L+M AF  +    Y+ +    + +I  YP  ++  Y  YL+ +
Sbjct: 60  FGEIERLYPYSDLAKRALIMQAFSYHKDKDYENSRIAAQRFIDFYPADEDAAYAEYLLAL 119

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           SY   I +V  DQ  T   LQ +  ++ERY ++ Y K A     +  + LAAKE+EIGRY
Sbjct: 120 SYYDQIDEVGRDQGLTFQALQGLRTVIERYPDTEYAKSAILKFDLAFDHLAAKEMEIGRY 179

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           YLKR  Y +AI RF++V+ ++    H  EA+ RL+EAY+AL L DEA+   +++   +  
Sbjct: 180 YLKRDHYTSAINRFRVVVEDFQTTAHTAEALYRLIEAYLALGLADEAQTAGAILGHNFQS 239

Query: 260 GYWARYVETLV 270
             W      L+
Sbjct: 240 TEWYDDGFRLL 250


>gi|126173260|ref|YP_001049409.1| putative lipoprotein [Shewanella baltica OS155]
 gi|152999619|ref|YP_001365300.1| putative lipoprotein [Shewanella baltica OS185]
 gi|160874238|ref|YP_001553554.1| putative lipoprotein [Shewanella baltica OS195]
 gi|217974429|ref|YP_002359180.1| outer membrane assembly lipoprotein YfiO [Shewanella baltica OS223]
 gi|304410383|ref|ZP_07392001.1| outer membrane assembly lipoprotein YfiO [Shewanella baltica OS183]
 gi|307304475|ref|ZP_07584225.1| outer membrane assembly lipoprotein YfiO [Shewanella baltica BA175]
 gi|125996465|gb|ABN60540.1| putative lipoprotein [Shewanella baltica OS155]
 gi|151364237|gb|ABS07237.1| putative lipoprotein [Shewanella baltica OS185]
 gi|160859760|gb|ABX48294.1| putative lipoprotein [Shewanella baltica OS195]
 gi|217499564|gb|ACK47757.1| outer membrane assembly lipoprotein YfiO [Shewanella baltica OS223]
 gi|304350867|gb|EFM15267.1| outer membrane assembly lipoprotein YfiO [Shewanella baltica OS183]
 gi|306911877|gb|EFN42301.1| outer membrane assembly lipoprotein YfiO [Shewanella baltica BA175]
 gi|315266472|gb|ADT93325.1| outer membrane assembly lipoprotein YfiO [Shewanella baltica OS678]
          Length = 253

 Score =  259 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 54/253 (21%), Positives = 97/253 (38%), Gaps = 14/253 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +YKF+  +   +    L         +     +        +Y +A   ++  N+SKA  
Sbjct: 1   MYKFSKGVTLVLFSLALSACSSSPDDN----DIAAKTSPDVLYTQARTSMELGNYSKAVR 56

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   FPF     +  L   +  Y         +  + +I   P   ++DYV+Y+ G
Sbjct: 57  SLEALDSRFPFGPHKTQVQLDLIYAYYKMDDVASGIANIDRFIRLNPTHPDIDYVFYMRG 116

Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +   Q           I     D +  +   +   R+++ Y NS Y   A+  +   +N+
Sbjct: 117 LVNMQADNYLFHDMLNIDRTDRDPKNAQDAFKDFDRLIKTYPNSKYAADAQKRMLALKNR 176

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA   +++  YYLK   + AA  R Q V+  Y      E A+  ++EAY  L      + 
Sbjct: 177 LARYSIQVAEYYLKMNAWSAAAIRAQSVMETYPGTPSNERALEIMIEAYGELGQSKLKQN 236

Query: 249 VVSLIQERYPQGY 261
           V+ ++Q  YP   
Sbjct: 237 VLMVMQANYPNNE 249


>gi|330994414|ref|ZP_08318340.1| UPF0169 lipoprotein [Gluconacetobacter sp. SXCC-1]
 gi|330995012|ref|ZP_08318932.1| UPF0169 lipoprotein [Gluconacetobacter sp. SXCC-1]
 gi|329757925|gb|EGG74449.1| UPF0169 lipoprotein [Gluconacetobacter sp. SXCC-1]
 gi|329758540|gb|EGG75058.1| UPF0169 lipoprotein [Gluconacetobacter sp. SXCC-1]
          Length = 294

 Score =  259 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 60/247 (24%), Positives = 118/247 (47%), Gaps = 3/247 (1%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            +   +A       +  SS     +    V     +Y   V  L+   +  +   F+   
Sbjct: 23  LVLVPLAGLLAACGQSASS---INERAPRVGSAETLYNNGVDALRSDRYLLSVNQFDTLQ 79

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
           R++P++     + LM  +  Y   KY +A    + ++  +P S +  Y +YL  + Y + 
Sbjct: 80  RNYPYSQYTANAQLMEGYANYLLNKYPEAVQQLDRFLELHPTSADAAYAFYLRALCYYEQ 139

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
           + DV  DQ+ T   +  +  ++ R+  SPY + A+  + + R+ LA KE+ +GR+Y ++ 
Sbjct: 140 VADVQRDQQGTIEAMDALEEVITRFPQSPYARDAQLKIDLCRDHLAGKEMLVGRWYQQQN 199

Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
           +Y AA  R+Q V+ ++    H  EA+ RLVE Y+ + L+++AR+  +++   YP   W  
Sbjct: 200 DYPAAAGRYQRVVQDFQTTNHVPEALERLVEVYLDMGLLEQARKTGAVLAYNYPSSKWYT 259

Query: 265 YVETLVK 271
                ++
Sbjct: 260 DAYDHLR 266


>gi|323951204|gb|EGB47080.1| outer membrane assembly lipoprotein YfiO [Escherichia coli H252]
          Length = 249

 Score =  259 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 50/241 (20%), Positives = 98/241 (40%), Gaps = 17/241 (7%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +    FL G     S++   D+        E+Y  A   L++ N+ +A  
Sbjct: 1   MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWRQAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y       A +  + +I   P   N+DYV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   +                D +  +      S++V  Y NS Y   A   +   +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E  +  YY +RG +VA + R + +L +Y D +   +A+  +  AY  + +  +A +
Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEK 233

Query: 249 V 249
           V
Sbjct: 234 V 234


>gi|323491102|ref|ZP_08096292.1| putative lipoprotein [Vibrio brasiliensis LMG 20546]
 gi|323314649|gb|EGA67723.1| putative lipoprotein [Vibrio brasiliensis LMG 20546]
          Length = 241

 Score =  259 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 56/242 (23%), Positives = 104/242 (42%), Gaps = 17/242 (7%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
           T+   +A+  LVG    SS +V  D         E+Y +A + L+  N+  A +      
Sbjct: 5   TLSGLLALSVLVGCS--SSEEVVPDVPP-----SELYSEAQVSLQSGNWLTAIDKLEALD 57

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
             +PF   + +  L   +  Y         +  E +    P  + +D+V Y+ G+++   
Sbjct: 58  SRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIERFTRLNPTHEKLDWVLYMRGLTHMAQ 117

Query: 145 IRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
            R+             D    K       +++ERY +SPY + ++  +   +N+LA  ++
Sbjct: 118 DRNFMHDLLNTDRSDRDPEPVKKAFADFKKLLERYPDSPYAEDSQKRMYALKNRLAKYDL 177

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
               +YL+R  ++AAI R Q +   Y D E A +++   +EAY  L L D  +    +I+
Sbjct: 178 ATADFYLRREAWIAAINRTQELQKTYPDTEAARQSLEIQLEAYKQLGLEDAVQRTQKMIE 237

Query: 255 ER 256
             
Sbjct: 238 LN 239


>gi|169634098|ref|YP_001707834.1| putative competence protein (ComL) [Acinetobacter baumannii SDF]
 gi|169152890|emb|CAP01928.1| putative competence protein (ComL) [Acinetobacter baumannii]
          Length = 385

 Score =  259 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 57/253 (22%), Positives = 110/253 (43%), Gaps = 14/253 (5%)

Query: 17  YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
           Y++   AL++  + A    VG     S+   +D+      ++  ++KA   L    +  A
Sbjct: 6   YKITMLALSLGVASAF---VGCSSNPSKKEVVDTGPQ-SSEQAYFDKAQKALDRGQYLDA 61

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            +        +P    A+++ L   + ++    Y+ A +L E +I   P+  NVDY YY+
Sbjct: 62  TKSLEAIDTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYV 121

Query: 137 VGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
            G+S  +M          ++    D    K+  Q    ++ R+ +S Y   A   +    
Sbjct: 122 RGVSNMEMNYDSLLRYTSLQQSHRDVSYLKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIG 181

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
            +LA  E+   R+ +KR  ++AA  R Q V+ +Y       EA+A L  +Y  L     +
Sbjct: 182 QELAESEMNAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYDQLGDKATS 241

Query: 247 REVVSLIQERYPQ 259
           ++ + +++  YP 
Sbjct: 242 QQYIEVLKLNYPS 254


>gi|59711170|ref|YP_203946.1| lipoprotein component of outer membrane protein assembly complex
           [Vibrio fischeri ES114]
 gi|197334835|ref|YP_002155321.1| competence lipoprotein ComL [Vibrio fischeri MJ11]
 gi|59479271|gb|AAW85058.1| lipoprotein component of outer membrane protein assembly complex
           [Vibrio fischeri ES114]
 gi|197316325|gb|ACH65772.1| competence lipoprotein ComL [Vibrio fischeri MJ11]
          Length = 241

 Score =  259 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 63/243 (25%), Positives = 103/243 (42%), Gaps = 17/243 (6%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           LTI   +AV  LVG    SS DV  D         E+Y +A + L+  N++ A E     
Sbjct: 4   LTISSLLAVSLLVGCS--SSDDVIPDIPP-----SELYAQAQVSLQAGNWTSAIERLEAL 56

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +PF   + +  L   +V Y         +  E +    P     D+V Y+ G+++  
Sbjct: 57  DSRYPFGAYSEQVQLDLIYVYYKNDDLALGLATIERFTRLNPTHPKADWVLYMRGLTHMA 116

Query: 144 MIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
             R              D    +   +   R++ERY NS Y + A+  +   +N+LA  E
Sbjct: 117 QDRSFMHDLFRVDRSDRDPEPARSAFKDFKRLLERYPNSLYAEDAQTRMYALKNRLADYE 176

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +    +YL+R  +++AI R Q +   Y D E A +++  ++ AY  L L D  +    LI
Sbjct: 177 LATADFYLRREAWISAINRCQELQRTYPDTEAARKSLTIMLSAYKELKLEDAIKRTEELI 236

Query: 254 QER 256
              
Sbjct: 237 ALN 239


>gi|193076603|gb|ABO11274.2| putative competence protein (ComL) [Acinetobacter baumannii ATCC
           17978]
          Length = 385

 Score =  259 bits (662), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 57/253 (22%), Positives = 110/253 (43%), Gaps = 14/253 (5%)

Query: 17  YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
           Y++   AL++  + A    VG     S+   +D+      ++  ++KA   L    +  A
Sbjct: 6   YKITMLALSLGVASAF---VGCSSNPSKKEVVDTGPQ-SSEQAYFDKAQKALDRGQYLDA 61

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            +        +P    A+++ L   + ++    Y+ A +L E +I   P+  NVDY YY+
Sbjct: 62  TKSLEAIDTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYV 121

Query: 137 VGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
            G+S  +M          ++    D    K+  Q    ++ R+ +S Y   A   +    
Sbjct: 122 RGVSNMEMNYDSLLRYTSLQQSHRDVSYLKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIG 181

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
            +LA  E+   R+ +KR  ++AA  R Q V+ +Y       EA+A L  +Y  L     +
Sbjct: 182 QELAESEMNAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYDQLGDKATS 241

Query: 247 REVVSLIQERYPQ 259
           ++ + +++  YP 
Sbjct: 242 QQYIEVLKLNYPS 254


>gi|169796975|ref|YP_001714768.1| putative competence protein (ComL) [Acinetobacter baumannii AYE]
 gi|213156620|ref|YP_002318281.1| putative competence protein [Acinetobacter baumannii AB0057]
 gi|215484436|ref|YP_002326669.1| Competence lipoprotein comL precursor [Acinetobacter baumannii
           AB307-0294]
 gi|260555734|ref|ZP_05827954.1| competence lipoprotein comL [Acinetobacter baumannii ATCC 19606]
 gi|301346836|ref|ZP_07227577.1| DNA uptake lipoprotein [Acinetobacter baumannii AB056]
 gi|301511994|ref|ZP_07237231.1| DNA uptake lipoprotein [Acinetobacter baumannii AB058]
 gi|301594460|ref|ZP_07239468.1| DNA uptake lipoprotein [Acinetobacter baumannii AB059]
 gi|169149902|emb|CAM87795.1| putative competence protein (ComL) [Acinetobacter baumannii AYE]
 gi|213055780|gb|ACJ40682.1| putative competence protein [Acinetobacter baumannii AB0057]
 gi|213986423|gb|ACJ56722.1| Competence lipoprotein comL precursor [Acinetobacter baumannii
           AB307-0294]
 gi|260410645|gb|EEX03943.1| competence lipoprotein comL [Acinetobacter baumannii ATCC 19606]
          Length = 385

 Score =  259 bits (662), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 57/253 (22%), Positives = 110/253 (43%), Gaps = 14/253 (5%)

Query: 17  YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
           Y++   AL++  + A    VG     S+   +D+      ++  ++KA   L    +  A
Sbjct: 6   YKITMLALSLGVASAF---VGCSSNPSKKEVVDTGPQ-SSEQAYFDKAQKALDRGQYLDA 61

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            +        +P    A+++ L   + ++    Y+ A +L E +I   P+  NVDY YY+
Sbjct: 62  TKSLEAIDTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYV 121

Query: 137 VGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
            G+S  +M          ++    D    K+  Q    ++ R+ +S Y   A   +    
Sbjct: 122 RGVSNMEMNYDSLLRYTSLQQSHRDVSYLKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIG 181

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
            +LA  E+   R+ +KR  ++AA  R Q V+ +Y       EA+A L  +Y  L     +
Sbjct: 182 QELAESEMNAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYDQLGDKATS 241

Query: 247 REVVSLIQERYPQ 259
           ++ + +++  YP 
Sbjct: 242 QQYIEVLKLNYPS 254


>gi|77164235|ref|YP_342760.1| transmembrane protein [Nitrosococcus oceani ATCC 19707]
 gi|254435638|ref|ZP_05049145.1| outer membrane assembly lipoprotein YfiO [Nitrosococcus oceani
           AFC27]
 gi|76882549|gb|ABA57230.1| probable transmembrane protein [Nitrosococcus oceani ATCC 19707]
 gi|207088749|gb|EDZ66021.1| outer membrane assembly lipoprotein YfiO [Nitrosococcus oceani
           AFC27]
          Length = 261

 Score =  259 bits (662), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 53/243 (21%), Positives = 106/243 (43%), Gaps = 11/243 (4%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
           F S+ +   +G      +                Y +A   L   ++ KA  ++ Q    
Sbjct: 6   FLSLCLVLWLGGCAWLDK-PPPKQPEADWTVERFYAEAKTALDAGDYQKAISFYEQLEAR 64

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM-- 144
           +PF   A+++LL SA+  Y   + + A +  + +I  YP + ++DY +YL G+       
Sbjct: 65  YPFGAYAQQALLESAYAYYKFNEPESALAALDRFIRLYPLNSHMDYAHYLKGLVSFHRGV 124

Query: 145 --------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
                     +   D  + +  L+    +++R+ +S Y + +   +   RN+LA  E+ +
Sbjct: 125 GLVEKYIPRDETQRDPESARNALKSFKTLIQRFPDSKYAEDSAQRIVYLRNRLAQHEINV 184

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
             YY++RG Y+ AI R + V+ NY       EA+  +   Y  L L +   + + +++  
Sbjct: 185 AHYYMRRGAYIGAINRAKYVVENYQRTPPVPEALTIMARGYEILGLNELKEDTLRVLEAS 244

Query: 257 YPQ 259
           +P 
Sbjct: 245 FPG 247


>gi|237746822|ref|ZP_04577302.1| competence lipoprotein ComL [Oxalobacter formigenes HOxBLS]
 gi|229378173|gb|EEO28264.1| competence lipoprotein ComL [Oxalobacter formigenes HOxBLS]
          Length = 265

 Score =  259 bits (662), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 10/220 (4%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           T      ++Y +A   ++  N+ KA EY+ +    +PF   A+++ +  A+  Y   +  
Sbjct: 30  TVSWPAGKLYREAKDEMRSGNYEKAIEYYEKLESRYPFGVYAQQAQIDIAYAYYRDNEPA 89

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQ----------MIRDVPYDQRATKLMLQY 161
           QA +  E +I  +P   N+DY+YYL G+                     D +A +     
Sbjct: 90  QALAAVERFIKLHPNHPNIDYMYYLRGLINFNDRVGLLNFAFRQDLSERDPKAAQDAFDS 149

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
              +V RY +S Y K A + +      LA  E+ + +YY +RG Y+AA  R Q  + NY 
Sbjct: 150 FKLLVTRYPDSVYSKDAIYRMKYLVTMLAKYEIHVAKYYYRRGAYLAAANRAQRAINNYP 209

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           ++   EEA+  L E+Y  L L D + +   + ++ +P   
Sbjct: 210 ESAVVEEALYILAESYKKLGLYDLSNDADRIFKQNFPDSK 249


>gi|92112629|ref|YP_572557.1| competence lipoprotein ComL, putative [Chromohalobacter salexigens
           DSM 3043]
 gi|91795719|gb|ABE57858.1| competence lipoprotein ComL, putative [Chromohalobacter salexigens
           DSM 3043]
          Length = 268

 Score =  259 bits (662), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 59/222 (26%), Positives = 103/222 (46%), Gaps = 10/222 (4%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           +       ++E+Y++A   L    +S A          +PF   A ++ L   +  Y   
Sbjct: 25  NEPAPDLQEQELYQQAQSALDAGRYSTAVTRLEALDTRYPFGRYAEQAQLELIYAYYQTE 84

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ----------MIRDVPYDQRATKLM 158
            ++QA +    +I  +P+   VDY YY+ G++  Q          +I     D  AT+  
Sbjct: 85  DWEQARAAASRFIRLHPDHAQVDYAYYMRGLAAYQAGRFSLEGLELIDISKRDLGATRDA 144

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
                 +V R+ +SPY   AR  +   RN L+  E+++  +YL++G Y+AAI R + VL 
Sbjct: 145 NVDFGELVRRFPDSPYAADARQRIVYLRNVLSRHELQVADFYLRKGAYLAAINRGEWVLQ 204

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           +Y       +A+A +VE Y+ L + D AR V+  + +  P  
Sbjct: 205 HYPQTPATRDALAVMVEGYLGLDMRDRARTVLQTLIKNDPDN 246



 Score = 35.9 bits (82), Expect = 5.9,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 37/141 (26%), Gaps = 32/141 (22%)

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
                  D       +  +  +  RY    Y + A+  +                 Y + 
Sbjct: 38  QQAQSALDAGRYSTAVTRLEALDTRYPFGRYAEQAQLELIYA--------------YYQT 83

Query: 204 GEYV---AAIPRFQLV---------------LANYSDAEHAEEAMARLVEAYVALALMDE 245
            ++    AA  RF  +               LA Y     + E +  +  +   L    +
Sbjct: 84  EDWEQARAAASRFIRLHPDHAQVDYAYYMRGLAAYQAGRFSLEGLELIDISKRDLGATRD 143

Query: 246 AREVVSLIQERYPQGYWARYV 266
           A      +  R+P   +A   
Sbjct: 144 ANVDFGELVRRFPDSPYAADA 164



 Score = 35.9 bits (82), Expect = 5.9,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 26/67 (38%)

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
           G Y  A+ R + +   Y    +AE+A   L+ AY      ++AR   S     +P     
Sbjct: 47  GRYSTAVTRLEALDTRYPFGRYAEQAQLELIYAYYQTEDWEQARAAASRFIRLHPDHAQV 106

Query: 264 RYVETLV 270
            Y   + 
Sbjct: 107 DYAYYMR 113


>gi|37525234|ref|NP_928578.1| outer membrane protein assembly complex subunit YfiO [Photorhabdus
           luminescens subsp. laumondii TTO1]
 gi|36784661|emb|CAE13561.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 244

 Score =  259 bits (662), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 56/251 (22%), Positives = 104/251 (41%), Gaps = 20/251 (7%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
             ++         S+A+    G     +++   DS        E+Y K    L++ ++  
Sbjct: 2   MIRIKYLVAAATLSLALSGCAG-----NKNAVPDSPP-----AEIYSKGQEKLQKGSYPD 51

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A +        +PF   +++  L   +  Y +     A +  + +I   P   N+DYV Y
Sbjct: 52  AIKQLETLDNRYPFGPYSQQVQLDLIYAYYKSSDLPMALASIDRFIRLNPTHPNIDYVLY 111

Query: 136 LVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           + G++   +          I     D    ++  +  S++V  + NS Y   A   +   
Sbjct: 112 MRGLTSQALDNSPLQSFFGIDHSDRDPEHARVAFKDFSQLVRYHPNSLYTADAIKRLMFI 171

Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
           + +LA  E+ +  YY KRG YVA + R + +L +Y D +   EA+  +  AY  L L+ +
Sbjct: 172 KERLAKYELSVVEYYNKRGAYVAVVNRIEQMLRDYPDTQSTLEALPYMKSAYTHLGLIAQ 231

Query: 246 AREVVSLIQER 256
           A +V  LI   
Sbjct: 232 ADKVAKLIAAN 242


>gi|254248089|ref|ZP_04941410.1| Competence lipoprotein ComL [Burkholderia cenocepacia PC184]
 gi|124872865|gb|EAY64581.1| Competence lipoprotein ComL [Burkholderia cenocepacia PC184]
          Length = 309

 Score =  259 bits (662), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 53/239 (22%), Positives = 96/239 (40%), Gaps = 14/239 (5%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
            + G      +       T      ++Y +A   L   ++ K  +YF       PF   A
Sbjct: 59  LIAGCHGLPQKQDE----TATWSNNKLYSEAQDALSGGDWGKCAKYFESLQGRDPFGHFA 114

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI-------- 145
           +++ +  A+  +   +   A    + +I  +P+  ++ Y YYL GM +            
Sbjct: 115 QQAQINVAYCNWKDNEAAAADQAVDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFS 174

Query: 146 --RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
                  D +A +        +V+R+  S Y   A   +    N LA+ EV    YY +R
Sbjct: 175 GQDMSERDPQALRESYDAFKVVVDRFPKSKYAPDAAARMRYIVNALASHEVHAADYYYRR 234

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           G YVAAI R QL + +Y  A   E+A+  ++ +Y  L   + A +   ++   +P   +
Sbjct: 235 GAYVAAINRAQLAIKDYKGAPAIEDALHIMILSYGKLNQPELAEDTKRVLAGTFPDSPY 293



 Score = 42.0 bits (98), Expect = 0.095,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 38/111 (34%), Gaps = 22/111 (19%)

Query: 80  FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125
           F      FP +  A  +               + +A   Y  G Y  A +  +  I  Y 
Sbjct: 193 FKVVVDRFPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKDYK 252

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            +  ++   +++ +SY ++ +         +L       +   + +SPYV 
Sbjct: 253 GAPAIEDALHIMILSYGKLNQ--------PELAEDTKRVLAGTFPDSPYVT 295


>gi|262280060|ref|ZP_06057845.1| competence lipoprotein comL [Acinetobacter calcoaceticus RUH2202]
 gi|262260411|gb|EEY79144.1| competence lipoprotein comL [Acinetobacter calcoaceticus RUH2202]
          Length = 387

 Score =  258 bits (661), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 56/253 (22%), Positives = 108/253 (42%), Gaps = 14/253 (5%)

Query: 17  YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
           Y++   AL++  + A    VG     S+   +DS      ++  +EKA   L    +  A
Sbjct: 6   YKITMLALSLGLASAF---VGCSSNPSKKEVVDSGPQ-SSEQAYFEKAQKSLDRGQYLDA 61

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            +        +P    A+++ L   + ++    Y+ A +L E +I   P+  NVDY YY+
Sbjct: 62  TKSLEAIDTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYV 121

Query: 137 VGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
             ++  +           ++    D    K+  Q    ++ R+ +S Y   A   +    
Sbjct: 122 RAVANMEQNYDSLMRYTSLQQSHRDVSYLKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIG 181

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
            +LA  E+   R+ +KR  ++AA  R Q V+ +Y       EA+A L  +Y  L     +
Sbjct: 182 QELAENEMTAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYSQLGDKATS 241

Query: 247 REVVSLIQERYPQ 259
           ++ + +++  YP 
Sbjct: 242 QQYIEVLKLNYPN 254


>gi|84393595|ref|ZP_00992348.1| DNA uptake lipoprotein [Vibrio splendidus 12B01]
 gi|84375804|gb|EAP92698.1| DNA uptake lipoprotein [Vibrio splendidus 12B01]
          Length = 242

 Score =  258 bits (661), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 57/243 (23%), Positives = 101/243 (41%), Gaps = 17/243 (6%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           LT+   +AV  LVG    S+ ++  D    V     +Y  A   L+  ++  A E     
Sbjct: 4   LTLSGLLAVSLLVGCS--STEEIVPDVPPSV-----LYSDAQESLQSGSWLSAIEKLEAL 56

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +PF   + +  L   +  Y         +    ++   P  +  D+V Y+ G+++  
Sbjct: 57  DSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATISRFLRLNPTHEKQDWVLYMRGLTHMA 116

Query: 144 M----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
                      I     D    KL      R++ER+ +SPY + A+  +   +N+LA  +
Sbjct: 117 QDRNFMHDIFNIDRSDRDPEPVKLAFADFKRLLERFPSSPYAEDAQKRMFALKNRLAEYD 176

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +    +YL+R  ++AA+ R Q +   Y D   A +++   +EAY  L L D A     LI
Sbjct: 177 LATADFYLRREAWIAAVNRTQELQKTYPDTIAARKSLDIQLEAYKQLGLEDAASRTEKLI 236

Query: 254 QER 256
           +  
Sbjct: 237 ELN 239


>gi|127513879|ref|YP_001095076.1| putative lipoprotein [Shewanella loihica PV-4]
 gi|126639174|gb|ABO24817.1| putative lipoprotein [Shewanella loihica PV-4]
          Length = 252

 Score =  258 bits (661), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 51/228 (22%), Positives = 88/228 (38%), Gaps = 10/228 (4%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
             D          +Y +A   ++  N+SKA          +PF     +  L   +  Y 
Sbjct: 25  EDDIELSKSSPEVLYSQARTSMELGNYSKAVRSLEALDSRYPFGPHKTQVQLDLIYAYYK 84

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATK 156
                   +  + +I   P  K++DYVYY+ G+   Q           I     D +A +
Sbjct: 85  LDDSASGIANIDRFIRLNPTHKDIDYVYYMRGLVNMQSDNYMFHDMLNIDRTDRDPKAAQ 144

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              +   R++++Y NS Y   A+  +   +N+LA   + +  YY+K   + AA  R Q V
Sbjct: 145 DAFKDFDRLIKQYPNSKYAADAQKRMQFLKNRLAKYAITVAEYYIKMNAWSAAAVRAQTV 204

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
           L  Y      E A+  +  AY  L        V+ ++Q  +P     +
Sbjct: 205 LETYPGTPSTERALEIMATAYEELGQQKLKDHVLMVMQSNFPNNDMLK 252


>gi|171463621|ref|YP_001797734.1| putative transmembrane protein [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171193159|gb|ACB44120.1| putative transmembrane protein [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 295

 Score =  258 bits (661), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 60/235 (25%), Positives = 106/235 (45%), Gaps = 14/235 (5%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G              TD+  + ++Y +A   L + +F+K  +YF +    FPF   ++++
Sbjct: 45  GCAGSDGNKDD----TDIWSEAKLYSEATDKLNDADFAKCGKYFEKLEARFPFGPYSQQA 100

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------R 146
            + +A+  + A +  QA    + +I  +  S N+DY YYL G+                 
Sbjct: 101 QINAAYCYWKAQEQTQALVAIDRFIKLHQGSPNLDYAYYLKGLITFNDDLGWLGKFTGQD 160

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
               D +A K   +    +VER+ NS Y   A   +    N LA  +V + R+Y +RG Y
Sbjct: 161 LSERDPKAAKEAFESFKVVVERFPNSKYTPDAIDRMRYIVNSLAEADVIVARFYYQRGAY 220

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +AA  R QLV+ +Y  A   EEA+  L ++Y  L +   +++   + +  +P   
Sbjct: 221 LAAANRAQLVIRDYDRAPAVEEALYILTKSYEKLGMTQLSKDSARVFKLNFPDSD 275


>gi|90417172|ref|ZP_01225099.1| competence lipoprotein ComL, putative [marine gamma proteobacterium
           HTCC2207]
 gi|90330948|gb|EAS46209.1| competence lipoprotein ComL, putative [marine gamma proteobacterium
           HTCC2207]
          Length = 330

 Score =  258 bits (661), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 58/238 (24%), Positives = 100/238 (42%), Gaps = 14/238 (5%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
            C  +GW  + S +      T+V +    YEK    L   N+S A          FPF  
Sbjct: 18  GCSWLGWGEEESTEDETSGYTEVDF----YEKIQSSLNASNWSVAISNLELLESQFPFGK 73

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS----------Y 141
            A ++ L   + Q+  G +  + +  + +I  +P+  NVDY +Y+ G+S           
Sbjct: 74  YAEQAQLELMYAQFKTGDHDSSIAAADRFIRLHPQHPNVDYAFYVKGLSEVSQATSAFDN 133

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
                +   D    +      S ++ R+  SPY   AR  +   RNQL   E+ +  YY 
Sbjct: 134 FLPTDNSRRDIGTARDAFGTFSELLNRFPKSPYAPDARKRLVNLRNQLGRAEIHVANYYF 193

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            RG Y+AA  R + V+ N+       + +A + + Y  L + + +   V ++   YP+
Sbjct: 194 SRGAYLAAANRGRFVVENFQQTPAVPDGLAVMAQGYQMLGMQELSDHAVEVLAANYPE 251


>gi|157825369|ref|YP_001493089.1| hypothetical protein A1C_01315 [Rickettsia akari str. Hartford]
 gi|157799327|gb|ABV74581.1| hypothetical protein A1C_01315 [Rickettsia akari str. Hartford]
          Length = 247

 Score =  258 bits (661), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 76/242 (31%), Positives = 127/242 (52%), Gaps = 7/242 (2%)

Query: 30  IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
           I + F     +++S D+ +   T       +Y + V  L +Q + KA E F +     P 
Sbjct: 13  IGLVFSGCKSKKTSDDIVVPIPT-------LYNEGVTLLAKQKYKKAAEEFGRVFYQHPG 65

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
             +  ++ LM A+  + A +Y++A  + E +I  +P + ++ Y YYL  +SY  ++ DV 
Sbjct: 66  NAMTPQAELMQAYSLFLAAQYEEAVDVLEMFINLHPANVDIAYAYYLKALSYYMLVSDVN 125

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
           +DQ  T L       ++ R+ N+ Y   +   + +  + LA KE+ +GR+YLK+   +AA
Sbjct: 126 HDQSRTSLAKDSFEDVIARFPNTKYAIDSSLKIDLVNDHLAGKEMMVGRFYLKKQNPMAA 185

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
           I RF+ V+ NY    H+ EA+ RLVE Y+ L L DEA++  S++   YP   W  Y   L
Sbjct: 186 INRFEEVIDNYQTTSHSVEALYRLVEIYMMLGLPDEAQKYASVLGYNYPDSPWYSYAYKL 245

Query: 270 VK 271
           VK
Sbjct: 246 VK 247


>gi|297538119|ref|YP_003673888.1| outer membrane assembly lipoprotein YfiO [Methylotenera sp. 301]
 gi|297257466|gb|ADI29311.1| outer membrane assembly lipoprotein YfiO [Methylotenera sp. 301]
          Length = 269

 Score =  258 bits (660), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 59/249 (23%), Positives = 108/249 (43%), Gaps = 14/249 (5%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           K+ L + F++    + G     +     D  T       +Y+     ++++++ KA  YF
Sbjct: 2   KYILILMFAL---LMNGCAIFGAPTELDD--TKGLTAERIYQMGSEKMRDKDYDKAIVYF 56

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
            +    +P    A ++ L +A+  +         +  + +I  +P   NVDY YYL G++
Sbjct: 57  GKLESRYPNGRFAAQAQLETAYAHFKKQDPVLCVAAADRFIKLHPNHPNVDYAYYLKGLA 116

Query: 141 YAQ---------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
                         +    D R+ +        +V RY NS Y K A   +    N L+ 
Sbjct: 117 VFNERGVIEKLTKQQISDRDPRSLRDSFVTFKDLVTRYPNSKYAKDATQRMVYLANSLSD 176

Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
            E+++  YY+KR  Y+AAI R + VL  Y      E+A+  ++ AY  + L D  ++ V 
Sbjct: 177 HELDVANYYMKRQAYLAAINRCKYVLEYYPQTPGVEQALVTMISAYDLMGLDDLKKDTVR 236

Query: 252 LIQERYPQG 260
           +++  YP  
Sbjct: 237 ILETNYPNS 245


>gi|157369128|ref|YP_001477117.1| outer membrane protein assembly complex subunit YfiO [Serratia
           proteamaculans 568]
 gi|157320892|gb|ABV39989.1| putative lipoprotein [Serratia proteamaculans 568]
          Length = 243

 Score =  258 bits (660), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 53/228 (23%), Positives = 98/228 (42%), Gaps = 15/228 (6%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+D   D+        E+Y  A   L++ NF  A          +PF   +++  L
Sbjct: 19  GCSTSKDAVPDNPP-----SEIYATAQQKLQDGNFKGAITQLEALDNRYPFGPYSQQVQL 73

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV---------- 148
              +  Y +     A +  + ++   P   N+DYV Y+ G++   +              
Sbjct: 74  DLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVMYMRGLTDMALDDSALQGFFGVDRS 133

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
             D +  +   +  S+++++Y NS YV  A   +   +++LA  E+ +  YY KRG YVA
Sbjct: 134 DRDPQHARAAFRDFSQLIQQYPNSQYVTDANKRLVYLKDRLAKYELSVVEYYTKRGAYVA 193

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            + R + +L  Y D +   +A+  +  AY  L L  +A +V  +I   
Sbjct: 194 VVNRAEQMLREYPDTKATRDALPLMENAYKQLQLNGQADKVAKVIAAN 241


>gi|312881915|ref|ZP_07741678.1| putative lipoprotein [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309370433|gb|EFP97922.1| putative lipoprotein [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 241

 Score =  258 bits (660), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 54/248 (21%), Positives = 107/248 (43%), Gaps = 19/248 (7%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K  L+    ++V  L G    SS+DV  D         E+Y  A   L+  N++ A +
Sbjct: 1   MKKHLLSGLVVLSV--LAGCS--SSKDVVPDIPP-----SELYSDAQSSLQSGNWTNAIK 51

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   + +  L   +  Y   +   +++  + ++   P ++ +D+V Y+ G
Sbjct: 52  KLEALDSRYPFGAYSEQVQLDLIYAYYKNDELALSSATIDRFMRLNPTNERLDWVLYMRG 111

Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +++             I     D    K       ++++RY +S Y + A+  +   +N+
Sbjct: 112 LTHMAQDQNFMHSVFNIDRSDRDPEPVKKAFADFKKLLQRYPDSQYAEDAKLRLIALKNR 171

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  ++    +YL+R  ++AAI R Q +   Y + E A +++   +EAY  L + +    
Sbjct: 172 LANYDLATADFYLRREAWIAAIKRCQEIQKTYPNTEAARQSLPIQLEAYKQLGMQEAIDR 231

Query: 249 VVSLIQER 256
              LIQ  
Sbjct: 232 TKMLIQLN 239


>gi|226328714|ref|ZP_03804232.1| hypothetical protein PROPEN_02609 [Proteus penneri ATCC 35198]
 gi|225201900|gb|EEG84254.1| hypothetical protein PROPEN_02609 [Proteus penneri ATCC 35198]
          Length = 244

 Score =  258 bits (660), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 55/248 (22%), Positives = 101/248 (40%), Gaps = 16/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +     L G              T      E+Y  +   L + N+  A +
Sbjct: 1   MRRIKYLVAAATVSLLLAGCSSSDKD------ATADMSPSELYSTSQEKLLDGNYGAAIK 54

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y + +   A S  + ++   P   N+DYV Y+ G
Sbjct: 55  QLESLDNRYPFGPYSQQVQLDLIYAYYKSAELPMAISAIDRFMRLNPTHPNIDYVLYMRG 114

Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   +          I     D +   +  +  S++V  Y +S Y   A   +   +N+
Sbjct: 115 LTAQALDDSALQGFFGIDRSDRDPQHAIVAFKDFSQLVRYYPDSLYAADATKRLVFLKNR 174

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E+ + ++Y KRG YVA I R + ++ +Y D +   +A+  +  AY  L L  EA +
Sbjct: 175 LAKYELSVAKFYTKRGAYVAVINRVEQMMRDYPDTQATRDALVYMENAYKELGLTQEAEK 234

Query: 249 VVSLIQER 256
           V SLI   
Sbjct: 235 VASLIAAN 242


>gi|332283690|ref|YP_004415601.1| competence lipoprotein precursor [Pusillimonas sp. T7-7]
 gi|330427643|gb|AEC18977.1| competence lipoprotein precursor [Pusillimonas sp. T7-7]
          Length = 258

 Score =  258 bits (660), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 58/243 (23%), Positives = 102/243 (41%), Gaps = 14/243 (5%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
           A   + G              T       +Y+ A   +   N++ A          +PF 
Sbjct: 2   AAILIAGCGSTK----VEKDPTTGWSAERLYQDARAEISAGNWNDARTRLEAIEARYPFG 57

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM----------S 140
           G A+++L+  A+V +  G+ +QA +  + +  QYP     DY+ YL G+          +
Sbjct: 58  GYAQQALIDQAYVNWKDGEPEQALAAIDRFQQQYPNHPGTDYMLYLKGLVTFTPPSASFT 117

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
                     D +  +      + ++ RY +S Y   A+  VT   N +A  EV +  YY
Sbjct: 118 NITRQDPSERDPKGLRESYDSFNELIARYPDSRYTADAKKRVTWLVNTIAQNEVHVATYY 177

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            +RG YVAAI R Q V+ ++     +E+A+  +V AY  L L +   +   ++ E +P  
Sbjct: 178 YERGAYVAAINRAQTVVTDFQGVPASEKALYIMVLAYDKLQLPELRDDAKRVLDENFPNS 237

Query: 261 YWA 263
            + 
Sbjct: 238 KYY 240



 Score = 35.5 bits (81), Expect = 7.6,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 36/114 (31%), Gaps = 22/114 (19%)

Query: 78  EYFNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQ 123
           + FN+    +P +     +               +  A   Y  G Y  A +  +  +T 
Sbjct: 137 DSFNELIARYPDSRYTADAKKRVTWLVNTIAQNEVHVATYYYERGAYVAAINRAQTVVTD 196

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           +      +   Y++ ++Y ++      D             + E + NS Y + 
Sbjct: 197 FQGVPASEKALYIMVLAYDKLQLPELRD--------DAKRVLDENFPNSKYYEQ 242


>gi|329120442|ref|ZP_08249107.1| competence lipoprotein ComL [Neisseria bacilliformis ATCC BAA-1200]
 gi|327461900|gb|EGF08230.1| competence lipoprotein ComL [Neisseria bacilliformis ATCC BAA-1200]
          Length = 267

 Score =  258 bits (660), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 56/241 (23%), Positives = 105/241 (43%), Gaps = 11/241 (4%)

Query: 38  WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
              + + D     +T      ++Y +A   L   N+++A + +      FP    A+++ 
Sbjct: 17  CASKGTSDKDA-QITQDWSVEKLYAEAQDELNSSNYTRAVKLYELLESRFPQGRYAQQAQ 75

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV--------- 148
           L +A+  Y   + ++A +  E +   +P+  N+DY  YL G+                  
Sbjct: 76  LDTAYAYYKDEEREKALAAVERFQKLHPQHPNMDYALYLKGLILFNEDPSFLNKLAAQDW 135

Query: 149 -PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
              D +A +   Q  S +V+RY  S YV+ A   +    + LA  E+ + RYY KRG Y+
Sbjct: 136 SDRDPKANREAYQAFSELVQRYPQSKYVEDASARMAKLVDALAGNEMAVARYYAKRGAYL 195

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
           AA  R Q ++  + +    EEA+A +  +Y  +     A +   ++Q+ +PQ  +     
Sbjct: 196 AAANRAQNIVTGFQNTRFVEEALAIMELSYQKMGRPQLAEDTRRILQQNFPQSPYLTRPW 255

Query: 268 T 268
            
Sbjct: 256 K 256


>gi|330831469|ref|YP_004394421.1| ComL family lipoprotein [Aeromonas veronii B565]
 gi|328806605|gb|AEB51804.1| Lipoprotein, ComL family [Aeromonas veronii B565]
          Length = 254

 Score =  258 bits (660), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 62/255 (24%), Positives = 110/255 (43%), Gaps = 17/255 (6%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
            K  L +  ++    + G    S++    D   +      +Y+KA L L   N+ +A E 
Sbjct: 6   KKSHLLMSLALVATLITGCS--STKPKVPDEPPET-----LYQKARLKLDVGNYVQATEL 58

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
                  +PF   + +  L   +  Y      QA +  + +I   P  KN+DYV+Y+ G+
Sbjct: 59  LEALDSRYPFGAYSNQVQLDLIYAYYKQDDTAQAIANIDRFIRLNPAHKNIDYVFYMRGL 118

Query: 140 SYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
           +              I     D    +   Q    +++ Y NS Y   AR  +   +N+L
Sbjct: 119 TNMAADYNFFQSLFGIDRDDKDPAYARQAFQDFKTLLQNYPNSVYAADARARMIGLKNRL 178

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           A  ++ +  YY+KR   VAA  R +L++  Y D    E+A+  +VE+Y +L +   A+  
Sbjct: 179 ARYDLSVAEYYVKRDALVAAANRAKLIVETYPDTAETEKALEIMVESYDSLKMPQLAKHA 238

Query: 250 VSLIQERYPQGYWAR 264
             ++ + YP+   AR
Sbjct: 239 REVLAKNYPENRLAR 253


>gi|51473383|ref|YP_067140.1| lipoprotein [Rickettsia typhi str. Wilmington]
 gi|51459695|gb|AAU03658.1| probable lipoprotein [Rickettsia typhi str. Wilmington]
          Length = 251

 Score =  258 bits (660), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 78/254 (30%), Positives = 134/254 (52%), Gaps = 8/254 (3%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           +L K  L+ F  I +       +++S D+ +   T       +Y + ++ L ++ + KA 
Sbjct: 2   KLTKL-LSAFLVIGLILSGCKSKKNSNDIVVPIAT-------LYNEGIILLDKKKYKKAA 53

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           E F +     P   +  ++ LM A+  + A +Y++A  + + +I  +P + ++ Y YYL 
Sbjct: 54  EEFGKIFYQHPGNEMTPQAELMQAYALFLAAQYEEAVDILDMFINLHPANVDIAYAYYLK 113

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
            +SY  +I DV +DQ  T L       ++ ++ N+ Y   A   + +  + LA KE+ IG
Sbjct: 114 ALSYYMLISDVNHDQSRTFLSKDSFEDVITKFPNTKYAIDASLKIDLVNDHLAGKEMMIG 173

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           R+YLK+   +AAI RF+ V+ NY    H+ EA+ RLVE+Y+ L L DEA++  S++   Y
Sbjct: 174 RFYLKKKNPIAAINRFEEVIDNYQTTYHSVEALYRLVESYMMLGLHDEAKKYASVLGYNY 233

Query: 258 PQGYWARYVETLVK 271
           P   W  Y   LVK
Sbjct: 234 PDSKWYSYAYRLVK 247


>gi|149926151|ref|ZP_01914413.1| probable transmembrane protein [Limnobacter sp. MED105]
 gi|149824969|gb|EDM84181.1| probable transmembrane protein [Limnobacter sp. MED105]
          Length = 282

 Score =  258 bits (660), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 59/266 (22%), Positives = 109/266 (40%), Gaps = 18/266 (6%)

Query: 7   RAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVL 66
             +     W   L +  L      A+      ++           T+      +YE+A  
Sbjct: 4   TTLAPRTTWLRSLSQLFLIPALIFALAACGSAKQFDE--------TEGWSPARLYEEAKA 55

Query: 67  FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
            +   N+ +  E   +    +P+   A+++ + +AF  Y AG   QA +  + +I  YP 
Sbjct: 56  EIDVGNYERGIELLEKLEARYPYGRFAQQAQIDTAFAYYKAGDNAQALAATDRFIKLYPN 115

Query: 127 SKNVDYVYYLVGMSYAQMIRDVP----------YDQRATKLMLQYMSRIVERYTNSPYVK 176
            +N+DYVYYL G+      + +            D + T+        +V R+ +S Y +
Sbjct: 116 HQNLDYVYYLRGLISFNEDKGIFSLLSGEDQSARDPKGTRAAFDAFKEVVSRFPDSKYYE 175

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
            ++  +    N LA  E+ + RYY KRG Y+AA+ R Q V+  +      EEA+   + +
Sbjct: 176 DSKSRLQYLVNALAQNELHVARYYYKRGAYLAAVNRAQEVVRRFEQTPSIEEALFISLRS 235

Query: 237 YVALALMDEAREVVSLIQERYPQGYW 262
           Y  L +   A +   +I   +    +
Sbjct: 236 YEKLNMTALAADTKRVINLNFKDSPY 261


>gi|332876322|ref|ZP_08444095.1| outer membrane assembly lipoprotein YfiO [Acinetobacter baumannii
           6014059]
 gi|322507011|gb|ADX02465.1| Putative competence protein [Acinetobacter baumannii 1656-2]
 gi|323516879|gb|ADX91260.1| DNA uptake lipoprotein [Acinetobacter baumannii TCDC-AB0715]
 gi|332735473|gb|EGJ66527.1| outer membrane assembly lipoprotein YfiO [Acinetobacter baumannii
           6014059]
          Length = 376

 Score =  258 bits (659), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 56/246 (22%), Positives = 106/246 (43%), Gaps = 12/246 (4%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L +   +A  F VG     S+   +D+      ++  ++KA   L    +  A +     
Sbjct: 2   LALSLGVASAF-VGCSSNPSKKEVVDTGPQ-SSEQAYFDKAQKALDRGQYLDATKSLEAI 59

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +P    A+++ L   + ++    Y+ A +L E +I   P+  NVDY YY+ G+S  +
Sbjct: 60  DTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYVRGVSNME 119

Query: 144 M----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
           M          ++    D    K+  Q    ++ R+ +S Y   A   +     +LA  E
Sbjct: 120 MNYDSLLRYTSLQQSHRDVSYLKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQELAESE 179

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +   R+ +KR  ++AA  R Q V+ +Y       EA+A L  +Y  L     +++ + ++
Sbjct: 180 MNAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYDQLGDKATSQQYIEVL 239

Query: 254 QERYPQ 259
           +  YP 
Sbjct: 240 KLNYPS 245


>gi|261364921|ref|ZP_05977804.1| competence lipoprotein ComL [Neisseria mucosa ATCC 25996]
 gi|288566704|gb|EFC88264.1| competence lipoprotein ComL [Neisseria mucosa ATCC 25996]
          Length = 268

 Score =  258 bits (659), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 53/237 (22%), Positives = 102/237 (43%), Gaps = 10/237 (4%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
                          +T      ++Y +A   L   N+++A + +      FP    A++
Sbjct: 15  GACASNKGTVDKDAQITQDWNVEKLYAEAHDELNSSNYTRAIKLYEILESRFPNGRYAQQ 74

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV------- 148
           + L +A+  Y   + ++A +  + +   +P+  N+DY  YL G+      +         
Sbjct: 75  AQLDTAYAYYKDDEPEKALAAIDRFQRHHPQHPNMDYALYLKGLVLFNEDQSFLNKLASQ 134

Query: 149 ---PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
                D +A +   Q  + +V+RY  S Y   A   +    + L   E+ + RYY+KRG 
Sbjct: 135 DWSDRDPKANRSAYQAFAELVQRYPESKYAADATERMAKLVDALGGNEISVARYYMKRGA 194

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           Y+AA+ R Q ++  Y +  + EEA+A +  AY  L     A +   +++  +PQ  +
Sbjct: 195 YLAAVNRAQKIVERYQNTRYVEEALAMMELAYKKLDKPQLAADTRRVLETNFPQSPF 251


>gi|300718036|ref|YP_003742839.1| outer membrane assembly lipoprotein [Erwinia billingiae Eb661]
 gi|299063872|emb|CAX60992.1| outer membrane assembly lipoprotein [Erwinia billingiae Eb661]
          Length = 243

 Score =  258 bits (659), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 52/228 (22%), Positives = 93/228 (40%), Gaps = 15/228 (6%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
               S++   D+        E+Y  A   L++ NF  A          +PF   +++  L
Sbjct: 19  GCSGSKETVPDNPP-----SEIYATAQQKLQDGNFKGAITQLEALDNRYPFGPYSQQVQL 73

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDV 148
              +  Y       A +  + ++   P   N+DYV Y+ G++   +          I   
Sbjct: 74  DLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVIYMRGLTDMALDDSALQGFFGIDRS 133

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
             D    +      S+++  Y NS Y   AR  +   +++LA  E+ + ++Y KR  YVA
Sbjct: 134 DRDPTHARDAFHDFSQLLRGYPNSQYATDARKRLVYLKDRLAKYELSVAQFYTKREAYVA 193

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            + R + ++ +Y D +    A+  +  AY  L L  EA +V  LI   
Sbjct: 194 VVNRVEQMMKDYPDTQATRTALPLMENAYRQLQLNAEADKVAKLIAAN 241


>gi|218673357|ref|ZP_03523026.1| competence lipoprotein protein [Rhizobium etli GR56]
          Length = 248

 Score =  258 bits (659), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 92/249 (36%), Positives = 146/249 (58%), Gaps = 5/249 (2%)

Query: 19  LYKFALTIFFSI----AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
           + K A  +F S+    A   + G +     D+      +      +Y + +  +K  N +
Sbjct: 1   MMKTARALFASLLVLSAGASISGCQSDPDIDIT-KLGLETDPPDVLYTQGLANMKAGNMA 59

Query: 75  KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
           +A   F+   R+ PF+  ARK+L+MS FV+Y  G+   A + G  Y+ QYP+S++  YV 
Sbjct: 60  EAARKFDAIDRENPFSEWARKALVMSTFVKYRQGRLDDALASGNRYMAQYPKSQDAAYVQ 119

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
           YLVG++Y++ I DV  DQRA+   ++ M  +V+ Y NS YV  A+  +   R+QLA KE+
Sbjct: 120 YLVGLTYSKQIVDVTQDQRASAKTIEAMQAVVDNYPNSEYVDDAQAKIRYARDQLAGKEM 179

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
           +IGRYY++R EY+AAI RF++V+  Y +    EEA+ARLVEAY A+ ++DEA+   +++ 
Sbjct: 180 QIGRYYMERKEYLAAISRFRIVVEKYPNTNQIEEALARLVEAYYAMGIVDEAQTAAAVLG 239

Query: 255 ERYPQGYWA 263
             YP   W 
Sbjct: 240 HNYPDSQWY 248


>gi|253990667|ref|YP_003042023.1| outer membrane protein assembly complex subunit YfiO [Photorhabdus
           asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253782117|emb|CAQ85281.1| conserved hypothetical protein [Photorhabdus asymbiotica]
          Length = 243

 Score =  258 bits (659), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 56/248 (22%), Positives = 102/248 (41%), Gaps = 17/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +     L G     +++V  DS        E+Y      L++ N+  A  
Sbjct: 1   MIRMKYLVAAATLSLVLSGCS--GNKNVVPDSPP-----SEIYSAGQEKLRDGNYKAAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y +     A +  + ++   P   N+DYV Y+ G
Sbjct: 54  QLETLDNRYPFGPYSQQVQLDLIYAYYKSSDLPMALASIDRFMRLNPTHPNIDYVLYMRG 113

Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   +          I     D    +   +  S++V  Y NS Y   AR  +   + +
Sbjct: 114 LTSQALDDSTLQSFFGIDRSDRDPEHARASFRDFSQLVRHYPNSLYAADARKRLMFIKER 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E+ + +YY KRG YVA + R + +L +Y D +   +A+  +  AY  L L  +A +
Sbjct: 174 LAKYELSVVKYYNKRGAYVAVVNRAEQMLHDYPDTQSTLKALPYMERAYTRLGLTAQADK 233

Query: 249 VVSLIQER 256
           V  LI   
Sbjct: 234 VTKLIAAN 241


>gi|307132188|ref|YP_003884204.1| putative lipoprotein [Dickeya dadantii 3937]
 gi|306529717|gb|ADM99647.1| predicted lipoprotein [Dickeya dadantii 3937]
          Length = 244

 Score =  258 bits (659), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 56/248 (22%), Positives = 101/248 (40%), Gaps = 17/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +     L G    +S+D   D     R   E+Y  A   L++ NF  A  
Sbjct: 1   MTRMKYLVAAATLSLTLAGCS--NSKDAVPD-----RPPSELYATAQEKLQDGNFKAAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y + +   A +  + +I   P   NVDYV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKSAELPLAQASIDRFIRLNPTHPNVDYVLYMRG 113

Query: 139 MSYAQMIRD----------VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++                    D +  +   +  S++++ Y NS Y       +   + +
Sbjct: 114 LTNMAQDDSTLQGFFGVDRSDRDPQYARSAFKAFSQLLQGYPNSQYATDTSKRLAFLKER 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E+ + +YY KRG YVA + R + +L +Y D +    A+  +  AY  L L  +A +
Sbjct: 174 LAKYELSVAQYYTKRGAYVAVVNRVEQMLKDYPDTQATRTALPLMENAYRELQLTAQADK 233

Query: 249 VVSLIQER 256
           V  +I   
Sbjct: 234 VAKIIAAN 241


>gi|254504434|ref|ZP_05116585.1| outer membrane assembly lipoprotein YfiO [Labrenzia alexandrii
           DFL-11]
 gi|222440505|gb|EEE47184.1| outer membrane assembly lipoprotein YfiO [Labrenzia alexandrii
           DFL-11]
          Length = 268

 Score =  258 bits (659), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 68/230 (29%), Positives = 125/230 (54%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
            SS+D + +   +      ++ + +    +     +   F +  + +P++  ++KSL+  
Sbjct: 15  CSSKDEFDELALNDTPAEVLFNEGLALRAQGKLRDSTAKFEELDKLYPYSEYSKKSLVNL 74

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           A++ Y+ GKY +  +    ++T YP   +  Y+ YLVG SY + + D+  DQ  T+    
Sbjct: 75  AYLNYTRGKYTETVTTANRFVTLYPGDPDSAYMLYLVGQSYYRQMPDITRDQATTERAAS 134

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
               +++R+  S YV  A+  + + ++QL  KE+++GRYYL+R  YVAA+ RF+ V+ NY
Sbjct: 135 AYGELLQRFPESEYVPDAQRKLLIVQDQLGGKEMQVGRYYLERRNYVAAVNRFKTVVNNY 194

Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
               H EEA+ RL EAY AL ++ EA+   +++   +P   W +   TL+
Sbjct: 195 QTTRHVEEALFRLTEAYYALGVISEAQTAAAVLGHNFPDTQWYKDAYTLL 244


>gi|317401791|gb|EFV82406.1| competence lipoprotein [Achromobacter xylosoxidans C54]
          Length = 262

 Score =  258 bits (659), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 56/251 (22%), Positives = 101/251 (40%), Gaps = 14/251 (5%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            +    AV  + G    +S+       T      ++Y  A   +    + +A E      
Sbjct: 3   VVIALFAVIAIAGCGSTNSKYDK----TTNWSAEQLYADAKAEISSGGWKEARERLTAIE 58

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ- 143
             +PF   A+++LL  A+V +  G+ +QA +  + +   YP     DY  YL G+     
Sbjct: 59  SRYPFGVYAQQALLELAYVNWKDGENEQALAAIDRFQQLYPNHPGTDYALYLKGLINFTP 118

Query: 144 ---------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
                           D +  +      + +++RY  S Y   A   V    N +A  EV
Sbjct: 119 ASAFMSSITGQDPAERDPKGLRASYDAFNDLIKRYPESKYTPDAEKRVAWLVNTIAMNEV 178

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
            + RYY +RG Y+AA  R Q V+ ++  A   EEA+  +V++Y  L + +   +   +  
Sbjct: 179 HVARYYYERGAYIAAANRAQTVITDFEGAPATEEALYLMVQSYDKLGMTELKNDSQRVFD 238

Query: 255 ERYPQGYWARY 265
           + +P   +   
Sbjct: 239 KNFPNSTFKDK 249


>gi|254252276|ref|ZP_04945594.1| competence lipoprotein ComL [Burkholderia dolosa AUO158]
 gi|124894885|gb|EAY68765.1| competence lipoprotein ComL [Burkholderia dolosa AUO158]
          Length = 309

 Score =  257 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 55/239 (23%), Positives = 95/239 (39%), Gaps = 14/239 (5%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
            + G      +       T      ++Y +A   L   ++ K  +YF       PF   A
Sbjct: 59  LIAGCHGLPQKQDE----TATWSNNKLYSEAQDALSGGDWGKCAKYFEALQGRDPFGHFA 114

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI-------- 145
           +++ +  A+  +   +   A    + +I  +P+  ++ Y YYL GM +            
Sbjct: 115 QQAQINVAYCNWKDNEIAAADQAVDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFS 174

Query: 146 --RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
                  D +A +        +V+RY  S Y   A   +    N LA+ EV    YY +R
Sbjct: 175 GQDMSERDPQALRESYDAFKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRR 234

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           G YVAAI R QL + +Y  A   E+A+  +V +Y  L     A +   ++   +P   +
Sbjct: 235 GAYVAAINRAQLAIKDYKGAPAIEDALHIMVLSYGKLNQPQLAEDTKRVLAGTFPDSPY 293


>gi|259909397|ref|YP_002649753.1| outer membrane protein assembly complex subunit YfiO [Erwinia
           pyrifoliae Ep1/96]
 gi|224965019|emb|CAX56549.1| Outer membrane assembly lipoprotein YfiO [Erwinia pyrifoliae
           Ep1/96]
 gi|283479470|emb|CAY75386.1| UPF0169 lipoprotein PD_1756 precursor [Erwinia pyrifoliae DSM
           12163]
          Length = 243

 Score =  257 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 15/228 (6%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
               SRDV  DS        E+Y  A   L++ NF+ A          +PF   +++  L
Sbjct: 19  GCSGSRDVVPDSPP-----SEIYATAQQKLQDGNFNGAITQLEALDNRYPFGPYSQQVQL 73

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDV 148
              +  Y       A +  + ++   P   N+DYV Y+ G++   +          I   
Sbjct: 74  DLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVIYMRGLTDMALDDSALQGFFGIDRS 133

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
             D    +   +  S+++  Y NS Y   AR  +   +++LA  E+ +  +Y KR  YVA
Sbjct: 134 DRDPTHARDAFKDFSQLLRGYPNSQYATDARKRLVFLKDRLAKYELSVAEFYTKRAAYVA 193

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            + R + +L +Y D     +A+  +  AY  L L  +A  V  +I   
Sbjct: 194 VVNRVEQMLKDYPDTLATRKALPLMENAYRKLQLNAQAERVAKIIAAN 241


>gi|332855565|ref|ZP_08435939.1| outer membrane assembly lipoprotein YfiO [Acinetobacter baumannii
           6013150]
 gi|332868376|ref|ZP_08438122.1| outer membrane assembly lipoprotein YfiO [Acinetobacter baumannii
           6013113]
 gi|332727389|gb|EGJ58822.1| outer membrane assembly lipoprotein YfiO [Acinetobacter baumannii
           6013150]
 gi|332733435|gb|EGJ64616.1| outer membrane assembly lipoprotein YfiO [Acinetobacter baumannii
           6013113]
          Length = 376

 Score =  257 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 56/246 (22%), Positives = 106/246 (43%), Gaps = 12/246 (4%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L +   +A  F VG     S+   +D+      ++  ++KA   L    +  A +     
Sbjct: 2   LALSLGVASAF-VGCSSNPSKKEVVDTGPQ-SSEQAYFDKAQKALDRGQYLDATKSLEAI 59

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +P    A+++ L   + ++    Y+ A +L E +I   P+  NVDY YY+ G+S  +
Sbjct: 60  DTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYVRGVSNME 119

Query: 144 M----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
           M          ++    D    K+  Q    ++ R+ +S Y   A   +     +LA  E
Sbjct: 120 MNYDSLLRYTSLQQSHRDVSYLKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQELAESE 179

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +   R+ +KR  ++AA  R Q V+ +Y       EA+A L  +Y  L     +++ + ++
Sbjct: 180 MNAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYDQLGDKATSQQYIEVL 239

Query: 254 QERYPQ 259
           +  YP 
Sbjct: 240 KLNYPS 245


>gi|297172748|gb|ADI23714.1| DNA uptake lipoprotein [uncultured Oceanospirillales bacterium
           HF4000_21D01]
          Length = 327

 Score =  257 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 66/240 (27%), Positives = 111/240 (46%), Gaps = 16/240 (6%)

Query: 30  IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
           I+ C   G       D   D  + +  + + Y +A+  L  Q+F+ A   +      FPF
Sbjct: 18  ISACGWFG------DDEDADEFSGLSTEEQFYRRALDQLNGQSFNAAISTYQALESRFPF 71

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----- 144
              A ++ +   +  Y     + A +  + +I  +PE++NVDY YY+ G+S         
Sbjct: 72  GRFAAQAQIEIVYAYYRNNDVEAARAAADRFIRLHPENENVDYAYYMKGLSSFSDNRGLL 131

Query: 145 -----IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
                I     D   ++      S+++  Y +SPY   AR  +   RN LAA E+ +  Y
Sbjct: 132 NRFLPIDPTKRDPGRSRESFSDFSQLLALYPDSPYAADARARMIFLRNNLAAYEIHVANY 191

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           YL+R  Y+AA+ R Q V+ N+         +A ++E Y+ L L D A   ++L++E YPQ
Sbjct: 192 YLERSAYIAALRRGQYVVENFQGTPAVAYGVAIMIEGYLRLGLDDLADTSLALLRENYPQ 251


>gi|309782613|ref|ZP_07677335.1| competence lipoprotein ComL [Ralstonia sp. 5_7_47FAA]
 gi|308918588|gb|EFP64263.1| competence lipoprotein ComL [Ralstonia sp. 5_7_47FAA]
          Length = 258

 Score =  257 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 58/247 (23%), Positives = 107/247 (43%), Gaps = 14/247 (5%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
            +A   +        +       T      ++Y +A   L   +++KA +Y+ +    +P
Sbjct: 3   GVACLAISACGILPEQQDE----TAGWSANKLYSEAKDSLDGGDYAKAVKYYEKLESRYP 58

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM---- 144
           F   A+++ + +A+  Y  G+   A +  + +I  +P   +VDY YYL G+         
Sbjct: 59  FGQYAQQAQIETAYANYKDGETAAALAAVDRFIQLHPNHPSVDYAYYLNGLINFNDNLGW 118

Query: 145 ------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
                       D +A +        +  R+ NS Y   A   +    N +A  EV   R
Sbjct: 119 LGRFSNQDLSERDPKAARAAYDAFKTLFTRFPNSKYTPDATQRMQYIVNAMAEHEVGAAR 178

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           YY +RG Y+AA+ R Q  + +Y  A   EEA+  ++++Y AL + D   +   +I++ YP
Sbjct: 179 YYYRRGAYLAAVNRAQDAIKDYDRAPAVEEALYIMMKSYEALGMKDMRDDTERIIKQNYP 238

Query: 259 QGYWARY 265
           +  +  Y
Sbjct: 239 KSDFLAY 245


>gi|260553982|ref|ZP_05826247.1| competence lipoprotein comL [Acinetobacter sp. RUH2624]
 gi|260404868|gb|EEW98373.1| competence lipoprotein comL [Acinetobacter sp. RUH2624]
          Length = 373

 Score =  257 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 58/253 (22%), Positives = 111/253 (43%), Gaps = 14/253 (5%)

Query: 17  YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
           Y++   AL++  + A    VG     S+   +D+      ++  +EKA   L    + +A
Sbjct: 6   YKITMLALSLGVASAF---VGCSSNPSKKEVVDTGPQ-SSEQAYFEKAQKSLDRGQYLEA 61

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            +        +P    A+++ L   + ++    Y+ A +L E +I   P+  NVDY YY+
Sbjct: 62  TKSLEAIDTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYV 121

Query: 137 VGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
            G+S  ++          ++    D    K+  Q    ++ R+ +S Y   A   +    
Sbjct: 122 RGVSNMELNYDSLLRYTSLQQSHRDISYLKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIG 181

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
            +LA  E+   R+ +KR  +VAA  R Q V+ +Y       EA+A L  +Y  L     +
Sbjct: 182 QELAESEMNAARFNVKRKAWVAAAERSQWVIEHYPQTPQIPEALATLAYSYDQLGDKATS 241

Query: 247 REVVSLIQERYPQ 259
           ++ + +++  YP 
Sbjct: 242 QQYIEVLKLNYPS 254


>gi|206560229|ref|YP_002230993.1| putative lipoprotein [Burkholderia cenocepacia J2315]
 gi|198036270|emb|CAR52166.1| putative lipoprotein [Burkholderia cenocepacia J2315]
          Length = 274

 Score =  257 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 53/239 (22%), Positives = 96/239 (40%), Gaps = 14/239 (5%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
            + G      +       T      ++Y +A   L   ++ K  +YF       PF   A
Sbjct: 24  LIAGCHGLPQKQDE----TATWSNNKLYSEAQDALSGGDWGKCAKYFESLQGRDPFGHFA 79

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI-------- 145
           +++ +  A+  +   +   A    + +I  +P+  ++ Y YYL GM +            
Sbjct: 80  QQAQINVAYCNWKDNEPAAADQAVDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFS 139

Query: 146 --RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
                  D +A +        +V+R+  S Y   A   +    N LA+ EV    YY +R
Sbjct: 140 GQDMSERDPQALRESYDAFKVVVDRFPKSKYAPDAAARMRYIVNALASHEVHAADYYYRR 199

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           G YVAAI R QL + +Y  A   E+A+  ++ +Y  L   + A +   ++   +P   +
Sbjct: 200 GAYVAAINRAQLAIKDYKGAPAIEDALHIMILSYGKLNQPELAEDTKRVLAGTFPDSPY 258



 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 38/111 (34%), Gaps = 22/111 (19%)

Query: 80  FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125
           F      FP +  A  +               + +A   Y  G Y  A +  +  I  Y 
Sbjct: 158 FKVVVDRFPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKDYK 217

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            +  ++   +++ +SY ++ +         +L       +   + +SPYV 
Sbjct: 218 GAPAIEDALHIMILSYGKLNQ--------PELAEDTKRVLAGTFPDSPYVT 260


>gi|270264066|ref|ZP_06192334.1| hypothetical protein SOD_f02840 [Serratia odorifera 4Rx13]
 gi|270042259|gb|EFA15355.1| hypothetical protein SOD_f02840 [Serratia odorifera 4Rx13]
          Length = 243

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 52/228 (22%), Positives = 96/228 (42%), Gaps = 15/228 (6%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+D   D+        E+Y  A   L++ NF  A          +PF   +++  L
Sbjct: 19  GCSTSKDAVPDNPP-----SEIYATAQQKLQDGNFKGAITQLEALDNRYPFGPYSQQVQL 73

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV---------- 148
              +  Y +     A +  + ++   P   N+DYV Y+ G++   +              
Sbjct: 74  DLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVMYMRGLTDMALDDSALQGFFGVDRS 133

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
             D +  +   +  S+++++Y  S YV  A   +   +++LA  E+ +  YY KRG YVA
Sbjct: 134 DRDPQHARAAFRDFSQLIQQYPTSQYVTDANKRLVYLKDRLAKYELSVVEYYTKRGAYVA 193

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            + R   +L  Y D +   +A+  +  AY  L L  +A +V  +I   
Sbjct: 194 VVNRADQMLREYPDTQATRDALPLMENAYKQLQLNGQADKVAKVIAAN 241


>gi|254230256|ref|ZP_04923647.1| hypothetical protein VEx25_0358 [Vibrio sp. Ex25]
 gi|262395164|ref|YP_003287018.1| putative component of the lipoprotein assembly complex [Vibrio sp.
           Ex25]
 gi|151937236|gb|EDN56103.1| hypothetical protein VEx25_0358 [Vibrio sp. Ex25]
 gi|262338758|gb|ACY52553.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio sp. Ex25]
          Length = 242

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 56/242 (23%), Positives = 101/242 (41%), Gaps = 17/242 (7%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
           T+   +AV  L G     S++  +  V       E+Y  A + L+  N+  A E      
Sbjct: 5   TLTGLLAVSLLFGCA---SKEEIVPDVP----PSELYADAQISLQSGNWLSAIEKLEALD 57

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
             +PF   + +  L   +  Y         +    ++   P  + +D+V Y+ G+S+   
Sbjct: 58  SRYPFGAYSEQVQLDLIYAYYKNDDLALGLATISRFMRLNPTHEKMDWVLYMRGLSHMAQ 117

Query: 145 IRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
            R+             D    K       ++++RY NSPY + ++  +   +N+LA  ++
Sbjct: 118 DRNFMHDLFSVDRSDRDPEPVKKAFDDFKKLLQRYPNSPYAEDSQKRMVALKNRLANYDL 177

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
               +YL+R  +VAAI R Q +   + D E A +++   +EAY  L L D       LI+
Sbjct: 178 ATADFYLRREAWVAAINRSQELQKAFPDTEAARKSLTIQLEAYKQLGLEDAVARTEKLIE 237

Query: 255 ER 256
             
Sbjct: 238 LN 239


>gi|262369408|ref|ZP_06062736.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
 gi|262315476|gb|EEY96515.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
          Length = 327

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 62/254 (24%), Positives = 115/254 (45%), Gaps = 17/254 (6%)

Query: 17  YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSK 75
           Y++   ALTI  + A+   VG      ++V     T  +   +VY +KA   L+   ++ 
Sbjct: 6   YKMTMLALTIGIASAM---VGCSSNPKKEVVD---TGPQSSEQVYIQKAEKALQSGQYTD 59

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A ++       +P    A+++ L   +V++    Y+ A +L + +I   P+  NVDY YY
Sbjct: 60  AAKHLEALDTYYPTGEYAQQAQLELLYVKFQQKDYEGAIALADRFIRLNPQHPNVDYAYY 119

Query: 136 LVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           + G++  +           ++    D    K+  Q     + RY +S Y   A   +   
Sbjct: 120 VRGVANMEQNYDGLIRYTSLKQAHRDVSYLKVAYQNFVDFIRRYPSSTYAVDAAQRMKFI 179

Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
            N+LA  E+   R+ +KR  +VAA+ R Q V+ +Y  +    EA+A +  +Y  L     
Sbjct: 180 SNELAESEMNAARFNIKRKAWVAALERAQWVIEHYPQSPQVPEALATVAYSYDQLGDKQT 239

Query: 246 AREVVSLIQERYPQ 259
           A++   +++  YP 
Sbjct: 240 AQQYTDVLKLNYPN 253


>gi|269966584|ref|ZP_06180665.1| putative lipoprotein [Vibrio alginolyticus 40B]
 gi|269828769|gb|EEZ83022.1| putative lipoprotein [Vibrio alginolyticus 40B]
          Length = 242

 Score =  256 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 56/242 (23%), Positives = 101/242 (41%), Gaps = 17/242 (7%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
           T+   +AV  L G     S++  +  V       E+Y  A + L+  N+  A E      
Sbjct: 5   TLTGLLAVSLLFGCA---SKEEIVPDVP----PSELYADAQISLQSGNWLSAIEKLEALD 57

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
             +PF   + +  L   +  Y         +    ++   P  + +D+V Y+ G+S+   
Sbjct: 58  SRYPFGAYSEQVQLDLIYAYYKNDDLALGLATISRFMRLNPTHEKMDWVLYMRGLSHMAQ 117

Query: 145 IRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
            R+             D    K       ++++RY NSPY + ++  +   +N+LA  ++
Sbjct: 118 DRNFMHDLFSVDRSDRDPEPVKKAFDDFKKLLQRYPNSPYAQDSQKRMVALKNRLANYDL 177

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
               +YL+R  +VAAI R Q +   + D E A +++   +EAY  L L D       LI+
Sbjct: 178 ATADFYLRREAWVAAINRSQELQKAFPDTEAARKSLTIQLEAYKQLGLEDAVARTEKLIE 237

Query: 255 ER 256
             
Sbjct: 238 LN 239


>gi|99080532|ref|YP_612686.1| competence lipoprotein ComL, putative [Ruegeria sp. TM1040]
 gi|99036812|gb|ABF63424.1| competence lipoprotein ComL putative [Ruegeria sp. TM1040]
          Length = 283

 Score =  256 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 75/248 (30%), Positives = 118/248 (47%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           A  I     +  L                 +     ++YE+    L       A  +F++
Sbjct: 8   AKGIGVVALMATLAACGGADGDAQRSSLDLEGFSPAQIYERGEFELARSREKDAAYFFSE 67

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
             R +P++  A++SL+M AF  + A  Y+ + S  + YI  YP   +  Y  YL+ +SY 
Sbjct: 68  VERLYPYSEWAKQSLIMQAFTYHQAEDYENSRSAAQRYIDFYPTDADAAYAQYLLALSYY 127

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
             I +V  DQ  T   LQ +  ++E Y  S Y   A     +  + LA KE+EIGRYYLK
Sbjct: 128 DQIDEVGRDQGLTFQALQALRTVIEVYPESEYASSAILKFDLAFDHLAGKEMEIGRYYLK 187

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           R  Y AAI RF++V+ ++    H  EA+ RL+EAY++L L DEA+   +++   +    W
Sbjct: 188 RQHYSAAINRFRVVVEDFQTTSHTAEALYRLIEAYLSLGLTDEAQSAGAILGHNFQSTDW 247

Query: 263 ARYVETLV 270
                 L+
Sbjct: 248 YEDGYRLL 255


>gi|30248521|ref|NP_840591.1| TPR repeat-containing protein [Nitrosomonas europaea ATCC 19718]
 gi|30138407|emb|CAD84417.1| TPR repeat [Nitrosomonas europaea ATCC 19718]
          Length = 255

 Score =  256 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 60/243 (24%), Positives = 108/243 (44%), Gaps = 18/243 (7%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
            L      S + V            + Y +A   L E N++ A + F      +P+   A
Sbjct: 1   MLAACGILSEKTVD----HSKWSASKFYVEAKNELNEGNYAAAVKLFEALEARYPYGRYA 56

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----- 148
           +++ L  A+  Y   ++  A +  E +I  YP  +N+DY YY+ G++     + +     
Sbjct: 57  QQAQLEIAYAYYKDQEHASAIAAAERFIQLYPHHQNIDYAYYIKGLASFNDDQGLMGYIT 116

Query: 149 ---------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
                      D +A++   + + ++V RY +S Y   A   +    N LA  E+ + +Y
Sbjct: 117 HKIIKQDMSERDAKASRESFESLKQLVTRYPDSKYTPDALQRMAYLVNALARGEIHVAQY 176

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           Y+KR  YVAAI R Q +L  Y      E+A+  +  AY  L + D   +V  +I++ +P+
Sbjct: 177 YMKRKAYVAAIKRAQFILEEYPQTPATEDALYIMAVAYGELGMTDLREDVEKVIRKNFPE 236

Query: 260 GYW 262
             +
Sbjct: 237 SIY 239


>gi|255065279|ref|ZP_05317134.1| competence lipoprotein ComL [Neisseria sicca ATCC 29256]
 gi|255050700|gb|EET46164.1| competence lipoprotein ComL [Neisseria sicca ATCC 29256]
          Length = 268

 Score =  256 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 52/237 (21%), Positives = 102/237 (43%), Gaps = 10/237 (4%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
                          +T      ++Y +A   L   N+++A + +      FP    A++
Sbjct: 15  GACASNKGTVDKDAQITQDWNVEKLYAEAHDELNSSNYTRAIKLYEILESRFPNGRYAQQ 74

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV------- 148
           + L +A+  Y   + ++A +  + +   +P+  N+DY  YL G+      +         
Sbjct: 75  AQLDTAYAYYKDDEPEKALAAIDRFQRHHPQHPNMDYALYLKGLVLFNEDQSFLNKLASQ 134

Query: 149 ---PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
                D +A +   Q  + +V+RY  S Y   A   +    + L   E+ + RYY+KRG 
Sbjct: 135 DWSDRDPKANRSAYQAFAELVQRYPESKYAADATERMAKLVDALGGNEISVARYYMKRGA 194

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           Y+AA+ R Q ++  Y +  + EE++A +  AY  L     A +   +++  +PQ  +
Sbjct: 195 YLAAVNRAQKIVERYQNTRYVEESLAMMELAYKKLDKPQLAADTRRVLETNFPQSPF 251


>gi|251788632|ref|YP_003003353.1| outer membrane protein assembly complex subunit YfiO [Dickeya zeae
           Ech1591]
 gi|247537253|gb|ACT05874.1| outer membrane assembly lipoprotein YfiO [Dickeya zeae Ech1591]
          Length = 243

 Score =  256 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 56/248 (22%), Positives = 101/248 (40%), Gaps = 17/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +     L G    +S+D   D     R   E+Y  A   L++ NF  A  
Sbjct: 1   MTRMKYLVAAATLSLTLAGCS--NSKDAVPD-----RPPSELYATAQEKLQDGNFKAAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y + +   A +  + +I   P   NVDYV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKSAELPLAQASIDRFIRLNPTHPNVDYVLYMRG 113

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++                    D +  +   +  S++++ Y NS Y       +   + +
Sbjct: 114 LTNMAQDDSALQGFFGVDRSDRDPQYARAAFKAFSQLLQGYPNSQYATDTSKRLAFLKER 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E+ + +YY KRG YVA + R + +L +Y D +    A+  +  AY  L L  +A +
Sbjct: 174 LAKYELSVAQYYTKRGAYVAVVNRVEQMLKDYPDTQATRTALPLMENAYRELQLTAQADK 233

Query: 249 VVSLIQER 256
           V  +I   
Sbjct: 234 VAKIIATN 241


>gi|315498683|ref|YP_004087487.1| outer membrane assembly lipoprotein yfio [Asticcacaulis excentricus
           CB 48]
 gi|315416695|gb|ADU13336.1| outer membrane assembly lipoprotein YfiO [Asticcacaulis excentricus
           CB 48]
          Length = 302

 Score =  256 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 70/221 (31%), Positives = 120/221 (54%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
           V + R    +Y   +  L E+++++A +YF +  R  P++  +R+S++M  +  Y A  Y
Sbjct: 45  VYEERPVEALYNTGMQRLDEKSWNEAVDYFEEVERQHPYSEWSRRSIIMEIYAHYQANDY 104

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
            ++ +  E +I  YP S    Y YY+  ++Y + I DV  DQ  T+    Y+  IV+RY 
Sbjct: 105 NESTAAAERFIKLYPGSPLTPYAYYMRAINYFEQIVDVGRDQAYTETAQAYLREIVQRYP 164

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            + Y + A+  + +  +QLA KE+EIGR+YL + + +AAI RF+ V+  Y    H  EA+
Sbjct: 165 GTEYARDAQVKLDMVYDQLAGKEMEIGRFYLAQNQPLAAIGRFKTVITRYQTTSHTPEAL 224

Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
            RLVEA + + + DEA    +++   Y    W      L++
Sbjct: 225 YRLVEANLMMGITDEANRNAAVLGYNYAGDRWYTAAYKLMQ 265


>gi|183597511|ref|ZP_02959004.1| hypothetical protein PROSTU_00784 [Providencia stuartii ATCC 25827]
 gi|188023156|gb|EDU61196.1| hypothetical protein PROSTU_00784 [Providencia stuartii ATCC 25827]
          Length = 243

 Score =  256 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 54/248 (21%), Positives = 103/248 (41%), Gaps = 17/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +     L G           + V+      E+Y      L++ N+  A +
Sbjct: 1   MIRIKYLVAAATLSLVLTGCSSN-------NEVSPDSTPAEMYSIGQQKLQDGNYKAAIK 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   A++  L   +  Y + +   A +  + ++   P   N+DYV Y+ G
Sbjct: 54  QLEALDNRYPFGPYAQQVQLDLIYAYYKSAELPMAIAAIDRFMRLNPTHPNIDYVLYMRG 113

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   +   +            D +  ++  +  S++V  Y NS Y   A   +   +++
Sbjct: 114 LTAMALDDSLLQGFFGVDRSDRDPQHARVAFKDFSQLVRYYPNSLYANDASKRLVYLKDR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  ++ +  YY KRG YVA + R Q +L +Y D E    A+  +  AY  + L +EA +
Sbjct: 174 LARFDLSVVEYYNKRGAYVAVVNRVQQMLRDYPDTEATRNALKYMEIAYKQMGLDEEANK 233

Query: 249 VVSLIQER 256
           V +LI   
Sbjct: 234 VANLIAAN 241


>gi|271501680|ref|YP_003334706.1| outer membrane assembly lipoprotein YfiO [Dickeya dadantii Ech586]
 gi|270345235|gb|ACZ78000.1| outer membrane assembly lipoprotein YfiO [Dickeya dadantii Ech586]
          Length = 243

 Score =  256 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 56/248 (22%), Positives = 101/248 (40%), Gaps = 17/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +     L G    +S+D   D     R   E+Y  A   L++ NF  A  
Sbjct: 1   MTRMKYLVAAATLSLTLAGCS--NSKDAVPD-----RPPSELYATAQEKLQDGNFKAAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y + +   A +  + +I   P   NVDYV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKSAELPLAQASIDRFIRLNPTHPNVDYVLYMRG 113

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++                    D +  +   +  +++++ Y NS Y       +   + +
Sbjct: 114 LTNMAQDDSALQGFFGVDRSDRDPQYARAAFKAFNQLLQGYPNSQYATDTSKRLAFLKER 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E+ + +YY KRG YVA + R + +L +Y D +    A+  +  AY  L L  EA +
Sbjct: 174 LAKYELSVAQYYTKRGAYVAVVNRVEQMLKDYPDTQATRTALPLMENAYRELRLTAEADK 233

Query: 249 VVSLIQER 256
           V  +I   
Sbjct: 234 VARIIAAN 241


>gi|91227646|ref|ZP_01261923.1| hypothetical protein V12G01_13214 [Vibrio alginolyticus 12G01]
 gi|91188425|gb|EAS74719.1| hypothetical protein V12G01_13214 [Vibrio alginolyticus 12G01]
          Length = 242

 Score =  256 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 57/242 (23%), Positives = 101/242 (41%), Gaps = 17/242 (7%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
           T+   +AV  L G     S++  +  V       E+Y  A + L+  N+  A E      
Sbjct: 5   TLTGLLAVSLLFGCA---SKEEIVPDVP----PSELYADAQISLQSGNWLSAIEKLEALD 57

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
             +PF   + +  L   +  Y         +    ++   P  + +D+V Y+ G+S+   
Sbjct: 58  SRYPFGAYSEQVQLDLIYAYYKNDDLALGLATISRFMRLNPTHEKMDWVLYMRGLSHMAQ 117

Query: 145 IRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
            R+             D    K       ++++RY NSPY + ++  +   +N+LA  ++
Sbjct: 118 DRNFMHDLFSVDRSDRDPEPVKKAFDDFKKLLQRYPNSPYAEDSQKRMVALKNRLANYDL 177

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
               +YL+R  +VAAI R Q +   Y D E A +++   +EAY  L L D       LI+
Sbjct: 178 ATADFYLRREAWVAAINRSQELQKAYPDTEAARKSLTIQLEAYKQLGLEDAVARTEKLIE 237

Query: 255 ER 256
             
Sbjct: 238 LN 239


>gi|307543918|ref|YP_003896397.1| lipoprotein [Halomonas elongata DSM 2581]
 gi|307215942|emb|CBV41212.1| K05807 putative lipoprotein [Halomonas elongata DSM 2581]
          Length = 269

 Score =  256 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 56/221 (25%), Positives = 105/221 (47%), Gaps = 10/221 (4%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           +       + ++Y++    L++  ++ A          +PF   A ++ L   +  Y   
Sbjct: 28  EEQAPDVAEGQLYQEGRAALEDGRYTTAVNRLEAIDTRYPFGEHAEQAQLELIYAYYETS 87

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMS----------YAQMIRDVPYDQRATKLM 158
            ++ A +    +I  +P+   VDY YY+ G++            ++I     D  AT+  
Sbjct: 88  DWEAARAAASRFIRLHPDHPQVDYAYYMRGLAAWEAGRFSLESLRLIDISKRDLGATRDA 147

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
                 +V RY NS Y   AR  +   RN LA  E+E+  +YL++G Y+AA+ R + V+ 
Sbjct: 148 YSDFRDLVRRYPNSQYAPDARQRIVYLRNLLAQHELEVADFYLRKGAYLAAVKRGRWVIE 207

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           +Y +AE   +A+A +VE Y+ L + + A+E + ++ E  P 
Sbjct: 208 HYPEAESTRDALAVMVEGYLGLDMPERAKESLRVLIENAPN 248



 Score = 39.7 bits (92), Expect = 0.40,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 27/67 (40%)

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
           G Y  A+ R + +   Y   EHAE+A   L+ AY   +  + AR   S     +P     
Sbjct: 50  GRYTTAVNRLEAIDTRYPFGEHAEQAQLELIYAYYETSDWEAARAAASRFIRLHPDHPQV 109

Query: 264 RYVETLV 270
            Y   + 
Sbjct: 110 DYAYYMR 116


>gi|28897332|ref|NP_796937.1| hypothetical protein VP0558 [Vibrio parahaemolyticus RIMD 2210633]
 gi|153839764|ref|ZP_01992431.1| lipoprotein, ComL family [Vibrio parahaemolyticus AQ3810]
 gi|260364019|ref|ZP_05776750.1| competence lipoprotein ComL [Vibrio parahaemolyticus K5030]
 gi|260876295|ref|ZP_05888650.1| competence lipoprotein ComL [Vibrio parahaemolyticus AN-5034]
 gi|260895102|ref|ZP_05903598.1| competence lipoprotein ComL [Vibrio parahaemolyticus Peru-466]
 gi|260903278|ref|ZP_05911673.1| competence lipoprotein ComL [Vibrio parahaemolyticus AQ4037]
 gi|28805541|dbj|BAC58821.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149746717|gb|EDM57705.1| lipoprotein, ComL family [Vibrio parahaemolyticus AQ3810]
 gi|308088893|gb|EFO38588.1| competence lipoprotein ComL [Vibrio parahaemolyticus Peru-466]
 gi|308092865|gb|EFO42560.1| competence lipoprotein ComL [Vibrio parahaemolyticus AN-5034]
 gi|308107944|gb|EFO45484.1| competence lipoprotein ComL [Vibrio parahaemolyticus AQ4037]
 gi|308115633|gb|EFO53173.1| competence lipoprotein ComL [Vibrio parahaemolyticus K5030]
 gi|328472094|gb|EGF42971.1| hypothetical protein VP10329_03035 [Vibrio parahaemolyticus 10329]
          Length = 242

 Score =  256 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 56/242 (23%), Positives = 102/242 (42%), Gaps = 17/242 (7%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
           T+   +AV  L G     S++  +  V       E+Y  A + L+  N+  A E      
Sbjct: 5   TLTGLLAVSLLFGCA---SKEEIVPDVP----PSELYADAQVSLQSGNWLSAIEKLEALD 57

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
             +PF   + +  L   +  Y         +    ++   P  + +D+V Y+ G+S+   
Sbjct: 58  SRYPFGAYSEQVQLDLIYAYYKNDDLALGLATISRFMRLNPTHEKMDWVLYMRGLSHMAQ 117

Query: 145 ----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
                     I     D    K       ++++RY NSPY + A+  +   +N+LA  ++
Sbjct: 118 DRNFMHDLFSIDRSDRDPEPVKKAFDDFKKLLQRYPNSPYAEDAQKRMVALKNRLANYDL 177

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
               +YL+R  ++AAI R Q +  ++ D E A +++   +EAY  L L D      +LI+
Sbjct: 178 ATADFYLRREAWIAAINRSQELQKSFPDTEAARKSLEIQLEAYKQLQLEDAVARTEALIK 237

Query: 255 ER 256
             
Sbjct: 238 LN 239


>gi|83719596|ref|YP_442773.1| competence lipoprotein ComL [Burkholderia thailandensis E264]
 gi|83653421|gb|ABC37484.1| competence lipoprotein ComL [Burkholderia thailandensis E264]
          Length = 313

 Score =  256 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 14/236 (5%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G      +       T      ++Y +A   L   ++ K  +YF       PF   A+++
Sbjct: 66  GCHGLPQKSDE----TATWSNNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQA 121

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------R 146
            +  A+  +   +   A    + +I  +P+  +V Y YYL GM +               
Sbjct: 122 QINVAYCNWKDNETAAADQAVDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQD 181

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
               D +A +        +V+RY  S Y   A   +    N LA+ EV    YY +RG Y
Sbjct: 182 MSERDPQALRESYDAFKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAY 241

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           VAAI R QL +  Y +A   E+A+  ++ +Y  L     A +   ++   +P   +
Sbjct: 242 VAAINRAQLAIKEYKNAPAIEDALHIMMLSYAKLNQPQLADDTKRVLASTFPDSPY 297



 Score = 45.1 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 22/111 (19%)

Query: 80  FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125
           F      +P +  A  +               + +A   Y  G Y  A +  +  I +Y 
Sbjct: 197 FKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYK 256

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            +  ++   +++ +SYA++ +         +L       +   + +SPYV 
Sbjct: 257 NAPAIEDALHIMMLSYAKLNQ--------PQLADDTKRVLASTFPDSPYVT 299


>gi|34497648|ref|NP_901863.1| competence lipoprotein ComL [Chromobacterium violaceum ATCC 12472]
 gi|34103504|gb|AAQ59866.1| competence lipoprotein ComL [Chromobacterium violaceum ATCC 12472]
          Length = 264

 Score =  256 bits (654), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 61/254 (24%), Positives = 112/254 (44%), Gaps = 15/254 (5%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            +   + +  L G     + D      T      ++Y +A   L   N+++A + +    
Sbjct: 5   VVAAMLVMVGLAGCATTETYDE-----TRGWTVEKLYSEAHDELNSGNYTRAVKLYETLE 59

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
             FP+   A+++ +  A+  Y  G+ + A +  + +I  +P   N+DY+YYL G+ Y   
Sbjct: 60  ARFPYGRYAQQAQMDLAYTHYKDGEPELAIASADRFIKLHPTHPNLDYIYYLKGLVYYND 119

Query: 145 IRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
              +            D RA +        +  R+ +S Y   A+  +    + L   E+
Sbjct: 120 DSGLLAKWAGQDMSERDPRAAREAFAAFRELTTRFPSSSYAPDAKAKMIRLVDALGGNEM 179

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
            + RYY+KRG Y+AA  R Q V+ +Y++ ++ EEA+A +V AY  L L     +   ++ 
Sbjct: 180 HVARYYMKRGAYLAAANRAQGVVKDYANTKYPEEALAIMVAAYDKLQLPQLRDDARRVLA 239

Query: 255 ERYPQGYWARYVET 268
             YPQ  +     T
Sbjct: 240 LNYPQSQYLGKSWT 253


>gi|76811535|ref|YP_333729.1| competence lipoprotein ComL [Burkholderia pseudomallei 1710b]
 gi|76580988|gb|ABA50463.1| competence lipoprotein ComL [Burkholderia pseudomallei 1710b]
          Length = 313

 Score =  256 bits (654), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 14/236 (5%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G      +       T      ++Y +A   L   ++ K  +YF       PF   A+++
Sbjct: 66  GCHGLPQKSDE----TATWSNNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQA 121

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------R 146
            +  A+  +   +   A    + +I  +P+  +V Y YYL GM +               
Sbjct: 122 QINVAYCNWKDNETAAADQAVDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQD 181

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
               D +A +        +V+RY  S Y   A   +    N LA+ EV    YY +RG Y
Sbjct: 182 MSERDPQALRESYDAFKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAY 241

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           VAAI R QL +  Y +A   E+A+  ++ +Y  L     A +   ++   +P   +
Sbjct: 242 VAAINRAQLAIKEYKNAPAIEDALHIMMLSYAKLNQPQLADDTKRVLASTFPDSPY 297



 Score = 44.7 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 22/111 (19%)

Query: 80  FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125
           F      +P +  A  +               + +A   Y  G Y  A +  +  I +Y 
Sbjct: 197 FKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYK 256

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            +  ++   +++ +SYA++ +         +L       +   + +SPYV 
Sbjct: 257 NAPAIEDALHIMMLSYAKLNQ--------PQLADDTKRVLASTFPDSPYVT 299


>gi|325528652|gb|EGD05738.1| competence lipoprotein ComL [Burkholderia sp. TJI49]
          Length = 274

 Score =  256 bits (654), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 54/239 (22%), Positives = 95/239 (39%), Gaps = 14/239 (5%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
            + G      +       T      ++Y +A   L   ++ K  +YF       PF   A
Sbjct: 24  LIAGCHGLPQKQDE----TATWSNNKLYSEAQDALSGGDWGKCAKYFEALQGRDPFGHFA 79

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI-------- 145
           +++ +  A+  +   +   A    + +I  +P+  ++ Y YYL GM +            
Sbjct: 80  QQAQINVAYCNWKDNETAAADQAVDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFS 139

Query: 146 --RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
                  D +A +        +V+RY  S Y   A   +    N LA+ EV    YY +R
Sbjct: 140 GQDMSERDPQALRESYDAFKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRR 199

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           G YVAAI R QL + +Y  A   E+A+  ++ +Y  L     A +   ++   +P   +
Sbjct: 200 GAYVAAINRAQLAIKDYKGAPAIEDALHIMILSYGKLNQPQLAEDTKRVLAGTFPDSPY 258


>gi|86148439|ref|ZP_01066730.1| DNA uptake lipoprotein [Vibrio sp. MED222]
 gi|218708593|ref|YP_002416214.1| hypothetical lipoprotein [Vibrio splendidus LGP32]
 gi|85833793|gb|EAQ51960.1| DNA uptake lipoprotein [Vibrio sp. MED222]
 gi|218321612|emb|CAV17564.1| Hypothetical lipoprotein [Vibrio splendidus LGP32]
          Length = 242

 Score =  256 bits (654), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 58/243 (23%), Positives = 99/243 (40%), Gaps = 17/243 (6%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           LT+   +AV  LVG    SS ++  D    V     +Y  A   L+  ++  A E     
Sbjct: 4   LTLTGLLAVSLLVGCS--SSEEIVPDVPPSV-----LYSDAQESLQSGSWLSAIEKLEAL 56

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +PF   + +  L   +  Y         +    ++   P  +  D+V Y+ G+++  
Sbjct: 57  DSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATISRFLRLNPTHEKQDWVLYMRGLTHMA 116

Query: 144 M----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
                      I     D    KL      R++ER+  SPY + A+  +   +N+LA  +
Sbjct: 117 QDRNFMHDIFNIDRSDRDPEPVKLAFADFKRLLERFPASPYAEDAQKRMFALKNRLAEYD 176

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +    +YL+R  ++AAI R Q +   Y D   A +++   +EAY  L L D       LI
Sbjct: 177 LATADFYLRREAWIAAINRTQELQKTYPDTIAARKSLDIQLEAYEQLGLEDAVLRTEKLI 236

Query: 254 QER 256
           +  
Sbjct: 237 ELN 239


>gi|187477716|ref|YP_785740.1| lipoprotein [Bordetella avium 197N]
 gi|115422302|emb|CAJ48826.1| lipoprotein [Bordetella avium 197N]
          Length = 282

 Score =  256 bits (654), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 54/235 (22%), Positives = 97/235 (41%), Gaps = 14/235 (5%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G     ++       T      ++Y  A   +   N+ +A +        +PF   A+++
Sbjct: 33  GCGTSDNKYDK----TAGWSAEQLYADAKQEVAAGNWKEARDRLTAIESRYPFGTYAQQA 88

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ----------MIR 146
           L+  A+V +  G+ +QA +  + +   YP     DYV YL G+                 
Sbjct: 89  LIELAYVNWKDGENEQALAAIDRFQQLYPNHPGTDYVLYLKGLINFTPASAFMANLTGQD 148

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
               D +  +      + +++R+ +S Y   A   +    N +A  EV + RYY  RG Y
Sbjct: 149 PAERDPKGLRASYDAFNELIKRFPDSKYTPDAEQRMNWLVNAIAMNEVHVARYYYTRGAY 208

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           VAAI R Q VL ++  A   EEA+  +V +Y  L +     +   ++ + +P   
Sbjct: 209 VAAINRAQTVLTDFDGAPATEEALYIMVLSYDKLQMKQLKEDTERVLDKNFPNSK 263


>gi|296135787|ref|YP_003643029.1| outer membrane assembly lipoprotein YfiO [Thiomonas intermedia K12]
 gi|295795909|gb|ADG30699.1| outer membrane assembly lipoprotein YfiO [Thiomonas intermedia K12]
          Length = 273

 Score =  256 bits (654), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 64/264 (24%), Positives = 113/264 (42%), Gaps = 19/264 (7%)

Query: 9   ICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL 68
           + ++  W  +L    L    ++ +  L G     S+D  L          ++Y +A   +
Sbjct: 3   VVLYRLWTLRL----LGAAAAVVLLGLAGCASTPSKDETL-----GWSSAKLYAEAKDEM 53

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
              N  K  + + +    +P+  +A+++L+  A+  Y  G+  QA +  + ++  YP + 
Sbjct: 54  NSGNTDKGVKLYEKLESRYPYGLLAQQALIEIAYGNYKQGERAQALAAADRFLKLYPNNP 113

Query: 129 NVDYVYYLVGMSYAQMIRD----------VPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
             DYV YL G+      +              DQ A K   +    +V R+  S Y   A
Sbjct: 114 YTDYVLYLKGLINFNTDQGWFSFLSDQKLYERDQAAAKQSFESFKELVTRFPESKYAPDA 173

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
           R  +    N LA  E  +  +Y +RG YVAA  R Q  + +Y DA   + A+A LV+AY 
Sbjct: 174 RQRMRYIVNSLAEYETHVALFYYRRGAYVAAADRAQRAIEHYQDAPANQLALAILVDAYG 233

Query: 239 ALALMDEAREVVSLIQERYPQGYW 262
            L +     +   +++  YPQ  +
Sbjct: 234 KLGMTQLRDDAERVLKLNYPQSTY 257


>gi|163856157|ref|YP_001630454.1| competence lipoprotein precursor [Bordetella petrii DSM 12804]
 gi|163259885|emb|CAP42186.1| competence lipoprotein precursor [Bordetella petrii]
          Length = 303

 Score =  256 bits (654), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 58/250 (23%), Positives = 105/250 (42%), Gaps = 17/250 (6%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           + A+ +  ++      G + +  +       T      ++Y  A        +++A E  
Sbjct: 41  RAAVVLSIALVAAGCSGTDTKYDK-------TAGWSAEQLYADAKAETAAGAWNEARERL 93

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG-- 138
                 +PF   A+++L+  A+V +  G+ +QA +  + +   YP     DY+ YL G  
Sbjct: 94  TAIESRYPFGVYAQQALIDLAYVNWKDGENEQALAAIDRFQQMYPNHPGTDYMLYLKGLI 153

Query: 139 --------MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
                   MS          D +  +      + +++RY +S Y   A   VT   N +A
Sbjct: 154 NFTPASAFMSNLTGQDPAERDPKGLRASYDAFNELIKRYPSSKYTPDAEKRVTWLVNAIA 213

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
             EV + RYY +RG YVAA  R Q V+ ++     AEEA+  +  +Y  L + D   +  
Sbjct: 214 MNEVYVARYYYERGAYVAAANRAQTVITDFEGVPAAEEALVIMAASYDKLGMTDLKNDAE 273

Query: 251 SLIQERYPQG 260
            +++  YP  
Sbjct: 274 RVLKTNYPDS 283


>gi|269962552|ref|ZP_06176900.1| putative lipoprotein [Vibrio harveyi 1DA3]
 gi|269832747|gb|EEZ86858.1| putative lipoprotein [Vibrio harveyi 1DA3]
          Length = 242

 Score =  255 bits (653), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 55/242 (22%), Positives = 100/242 (41%), Gaps = 17/242 (7%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
           T+   +AV  L G     S++  +  V       E+Y  A   L+  N+  A E      
Sbjct: 5   TLTGLLAVSLLFGCA---SKEEIVPDVP----PSELYADAQTSLQSGNWLSAIEKLEALD 57

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
             +PF   + +  L   +  Y         +    ++   P  + +D+V Y+ G+S+   
Sbjct: 58  SRYPFGAYSEQVQLDLIYAYYKNDDLALGLATISRFMRLNPTHEKMDWVLYMRGLSHMAQ 117

Query: 145 IRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
            R+             D    K       ++++RY NSPY + ++  +   +N+LA  ++
Sbjct: 118 DRNFMHDLFNVDRSDRDPEPVKKAFDDFKKLLDRYPNSPYAEDSQKRMVALKNRLADYDL 177

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
               +YL+R  ++AAI R Q +   + D E A +++   +EAY  L L D       LI+
Sbjct: 178 ATADFYLRREAWIAAINRAQELQKAFPDTEAARKSLEIQLEAYKQLKLDDSVARTEELIK 237

Query: 255 ER 256
             
Sbjct: 238 LN 239


>gi|310766695|gb|ADP11645.1| outer membrane protein assembly complex subunit YfiO [Erwinia sp.
           Ejp617]
          Length = 243

 Score =  255 bits (653), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 94/228 (41%), Gaps = 15/228 (6%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
               +RDV  DS        E+Y  A   L++ NF+ A          +PF   +++  L
Sbjct: 19  GCSGARDVVPDSPP-----SEIYATAQQKLQDGNFNGAITQLEALDNRYPFGPYSQQVQL 73

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDV 148
              +  Y       A +  + ++   P   N+DYV Y+ G++   +          I   
Sbjct: 74  DLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVIYMRGLTDMALDDSALQGFFGIDRS 133

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
             D    +   +  S+++  Y NS Y   AR  +   +++LA  E+ +  +Y KR  YVA
Sbjct: 134 DRDPTHARDAFKDFSQLLRGYPNSQYATDARKRLVFLKDRLAKYELSVAEFYTKRAAYVA 193

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            + R + +L +Y D     +A+  +  AY  L L  +A  V  +I   
Sbjct: 194 VVNRVEQMLKDYPDTLATRKALPLMENAYRKLQLNAQAERVAKIIAAN 241


>gi|300722271|ref|YP_003711555.1| putative lipoprotein [Xenorhabdus nematophila ATCC 19061]
 gi|297628772|emb|CBJ89350.1| putative lipoprotein with tetratricopeptide repeats (TPR) domain
           [Xenorhabdus nematophila ATCC 19061]
          Length = 243

 Score =  255 bits (653), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 54/248 (21%), Positives = 101/248 (40%), Gaps = 17/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +     L G    S++D   D         ++Y      L+E N+  A +
Sbjct: 1   MIRMKYLVAATTLSLVLSGCS--SNKDAVPDIPP-----SQIYSIGQEKLQEGNYKAAIK 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y + ++  A +  + +I   P   N+DYV+Y+ G
Sbjct: 54  QLESLDNRYPFGPYSQQVQLDLIYAYYKSAEFPLAIASIDRFIRLNPTHPNIDYVWYMRG 113

Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +    +          I     D    +   +  + ++  Y +S Y   A   +   + +
Sbjct: 114 LVSQALDDSALQEFFGIDRSDRDPEHARAAFRDFNHLIHDYPSSQYSADAIKRLAFLKER 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E+ +  YY KR  YVA + R + +L +Y D     EA++ +  AY  L L+ EA +
Sbjct: 174 LARYELAVVEYYTKRSAYVAVVNRVEQMLRDYPDTHATREALSYMESAYKELGLIAEADK 233

Query: 249 VVSLIQER 256
           V  LI   
Sbjct: 234 VAKLIAAN 241


>gi|148978561|ref|ZP_01815013.1| putative lipoprotein [Vibrionales bacterium SWAT-3]
 gi|145962350|gb|EDK27631.1| putative lipoprotein [Vibrionales bacterium SWAT-3]
          Length = 242

 Score =  255 bits (653), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 56/243 (23%), Positives = 101/243 (41%), Gaps = 17/243 (6%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           LT+   +AV  L G    S+ ++  D    V     +Y +A   L+  ++  A E     
Sbjct: 4   LTLAGLLAVSLLAGCS--STEEIVPDVPPSV-----LYSEAQESLQSGSWLSAIEKLEAL 56

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +PF   + +  L   +  Y         +    ++   P  +  D+V Y+ G+++  
Sbjct: 57  DSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATISRFLRLNPTHEKQDWVLYMRGLTHMA 116

Query: 144 M----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
                      I     D    KL      R++ER+  SPY + A+  +   +N+LA  +
Sbjct: 117 QDRNFMHDIFNIDRSDRDPEPVKLAFADFKRLLERFPASPYAEDAQKRMFALKNRLADYD 176

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +    +YL+R  ++AAI R Q +   Y D   A +++   +EAY  L L D  +   +LI
Sbjct: 177 LATADFYLRREAWIAAINRTQELQKTYPDTIAARKSLKIQLEAYKQLGLEDAIQRTEALI 236

Query: 254 QER 256
           +  
Sbjct: 237 ELN 239


>gi|310814891|ref|YP_003962855.1| tetratricopeptide TPR_2 repeat protein [Ketogulonicigenium vulgare
           Y25]
 gi|308753626|gb|ADO41555.1| tetratricopeptide TPR_2 repeat protein [Ketogulonicigenium vulgare
           Y25]
          Length = 289

 Score =  255 bits (653), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 74/233 (31%), Positives = 117/233 (50%)

Query: 38  WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
                S  +      D     +V++     L E     A  +F +  R +P++  AR+ L
Sbjct: 29  CSSNESSVLRQPGALDAYSAEQVFDLGEQQLNENRLDDAAFFFGEIERLYPYSSWARRGL 88

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
           +M AF  + A  Y+ + S  + Y+  YP  ++  Y  YL+ +SY   I D+  DQ  T  
Sbjct: 89  IMQAFAYHRARDYENSRSAAQRYVDFYPTDEDAAYAQYLLALSYYDQIDDIGRDQGVTFR 148

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
            LQ + R++E Y +S Y   A     +  + LA KE+E+GRYYL RG + AAI RF++V+
Sbjct: 149 ALQELRRVIELYPDSEYATAAVQKFDLAFDHLAGKEMEVGRYYLSRGNFTAAISRFRVVV 208

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
            ++    +  EA+ RLVEAY+AL L DEAR   +++   Y    +      L+
Sbjct: 209 EDFQTTTYTPEALMRLVEAYMALGLTDEARSAAAILGHNYQSTPFYADAYALL 261


>gi|153834661|ref|ZP_01987328.1| lipoprotein, ComL family [Vibrio harveyi HY01]
 gi|156973323|ref|YP_001444230.1| hypothetical protein VIBHAR_01004 [Vibrio harveyi ATCC BAA-1116]
 gi|148868913|gb|EDL67971.1| lipoprotein, ComL family [Vibrio harveyi HY01]
 gi|156524917|gb|ABU70003.1| hypothetical protein VIBHAR_01004 [Vibrio harveyi ATCC BAA-1116]
          Length = 242

 Score =  255 bits (653), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 56/242 (23%), Positives = 100/242 (41%), Gaps = 17/242 (7%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
           T+   +AV  L G     S++  +  V       E+Y  A   L+  N+  A E      
Sbjct: 5   TLTGLLAVSLLFGCA---SKEEIVPDVP----PSELYADAQTSLQSGNWLSAIEKLEALD 57

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
             +PF   + +  L   +  Y         +    ++   P  + +D+V Y+ G+S+   
Sbjct: 58  SRYPFGAYSEQVQLDLIYAYYKNDDLALGLATISRFMRLNPTHEKMDWVLYMRGLSHMAQ 117

Query: 145 IRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
            R+             D    K       +++ERY NSPY + ++  +   +N+LA  ++
Sbjct: 118 DRNFMHDLFNVDRSDRDPEPVKKAFDDFKKLLERYPNSPYAEDSQKRMVALKNRLANYDL 177

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
               +YL+R  ++AAI R Q +   + D E A +++   +EAY  L L D       LI+
Sbjct: 178 ATADFYLRREAWIAAINRSQELQKAFPDTEAARKSLEIQLEAYKQLKLDDAVARTEELIK 237

Query: 255 ER 256
             
Sbjct: 238 LN 239


>gi|254785220|ref|YP_003072648.1| outer membrane assembly lipoprotein YfiO [Teredinibacter turnerae
           T7901]
 gi|237686542|gb|ACR13806.1| outer membrane assembly lipoprotein YfiO [Teredinibacter turnerae
           T7901]
          Length = 301

 Score =  255 bits (652), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 57/250 (22%), Positives = 108/250 (43%), Gaps = 16/250 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K    I    A    VG      +            ++  Y  A  +L+  N+S A E
Sbjct: 1   MIKHPAVIALVTAALLTVGCSSNDDKLAQ-------SSEQVTYNLAQKYLRSSNWSAAIE 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                  +FPF   A ++ L   +  +   +Y  A +  + ++  +P+ +NVDY +Y+ G
Sbjct: 54  ALEVMEENFPFGSYAEQAQLELIYAYFRGNEYDAAIASADRFVRLHPQHRNVDYAFYMRG 113

Query: 139 MS-------YAQMIRD--VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
           ++       +  M+       D    K    Y +++++RY +SPY   A+  +   RN L
Sbjct: 114 IAAFHNDTAFYSMLPTDITQRDAGTAKDSFDYFAQLIDRYPDSPYALDAQKRMIYLRNML 173

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           A  E+ +  YY KR  Y+AA  R + V+ N+       + +A + +AY  L + D ++  
Sbjct: 174 ARYEIHVANYYFKRSAYLAAANRGRYVVENFEGTPAVPDGLAVMAQAYQMLGMDDYSKSA 233

Query: 250 VSLIQERYPQ 259
             ++ + +P 
Sbjct: 234 EKVLVKNFPN 243



 Score = 35.5 bits (81), Expect = 9.2,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 35/88 (39%), Gaps = 4/88 (4%)

Query: 187 NQLAAKEVEI----GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
           ++LA    ++     + YL+   + AAI   +++  N+    +AE+A   L+ AY     
Sbjct: 25  DKLAQSSEQVTYNLAQKYLRSSNWSAAIEALEVMEENFPFGSYAEQAQLELIYAYFRGNE 84

Query: 243 MDEAREVVSLIQERYPQGYWARYVETLV 270
            D A          +PQ     Y   + 
Sbjct: 85  YDAAIASADRFVRLHPQHRNVDYAFYMR 112


>gi|67459480|ref|YP_247104.1| hypothetical protein RF_1088 [Rickettsia felis URRWXCal2]
 gi|67005013|gb|AAY61939.1| unknown [Rickettsia felis URRWXCal2]
          Length = 251

 Score =  255 bits (652), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 77/254 (30%), Positives = 134/254 (52%), Gaps = 8/254 (3%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           +L K  L+I F I +       +++S D+ +   T       +Y + V  L+++ + KA 
Sbjct: 2   KLTKL-LSILFIIGLSLSGCKSKKNSDDIVVPIPT-------LYNEGVSLLEKKKYKKAA 53

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           E F +     P   +  ++ LM  +  + A +Y++A  + + +I  +P + ++ Y YYL 
Sbjct: 54  EEFGRVFYQHPGNEMTPQAELMQGYSLFLAAQYEEAVDVLDMFINLHPANVDIAYAYYLK 113

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
            +SY  +I DV +DQ  T L       ++ ++ N+ Y   +   + +  + LA KE+ +G
Sbjct: 114 ALSYYMLISDVNHDQSRTFLAKDSFEDVIGKFPNTKYAIDSSLKIDLVNDHLAGKEMMVG 173

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           R+YLK+   +AAI RF+ V+ NY    H+ EA+ RLVE+Y+ L L DEA++  S++   Y
Sbjct: 174 RFYLKKKNPMAAINRFEEVIDNYQTTSHSVEALYRLVESYMMLGLADEAKKYASVLGYNY 233

Query: 258 PQGYWARYVETLVK 271
           P   W  Y   LVK
Sbjct: 234 PDSQWYSYAYKLVK 247


>gi|320539056|ref|ZP_08038730.1| putative outer membrane protein assembly lipoprotein [Serratia
           symbiotica str. Tucson]
 gi|320030896|gb|EFW12901.1| putative outer membrane protein assembly lipoprotein [Serratia
           symbiotica str. Tucson]
          Length = 241

 Score =  255 bits (652), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 60/248 (24%), Positives = 101/248 (40%), Gaps = 19/248 (7%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +     L G     S+D   D+        E+Y  A   +++ NF  A  
Sbjct: 1   MTRMKYLVAVATLSLVLAGCST--SKDAVPDNPP-----SEIYATAQQKMQDGNFKGAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y +     A +  + +I   P   N+DYV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLYLIYAYYKSADLPLAQASIDRFIRLNPTHPNIDYVMYMRG 113

Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   +          I     D    +   +  S+  ER  NS YV  A   +   +++
Sbjct: 114 LADMALDDSTLQGFFGIDRSDRDPLHARAAFRDFSQ--ERSPNSQYVTDANKRLVYLKDR 171

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E+ +  YY KRG YVAAI R + +L  Y D +   +A+  +  AY  L L  EA +
Sbjct: 172 LAKYELSVVEYYTKRGAYVAAINRVEQMLREYPDTKATRDALPLMERAYKRLQLNSEAEK 231

Query: 249 VVSLIQER 256
           V  +I   
Sbjct: 232 VAKVIAAN 239


>gi|291618566|ref|YP_003521308.1| YfiO [Pantoea ananatis LMG 20103]
 gi|291153596|gb|ADD78180.1| YfiO [Pantoea ananatis LMG 20103]
 gi|327394947|dbj|BAK12369.1| UPF0169 lipoprotein YfiO precursor [Pantoea ananatis AJ13355]
          Length = 243

 Score =  255 bits (652), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 53/248 (21%), Positives = 100/248 (40%), Gaps = 17/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +     LVG     S D   D+        E+Y  A   L++ NF  A +
Sbjct: 1   MTRMKYLVAAATLSLALVGCS--GSNDAVPDNPP-----SEIYATAQQKLQDGNFKAAIK 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y       A +    ++   P   N+DYV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPMAQAAISRFMRLNPTHPNIDYVIYMKG 113

Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   +          I     D    +   +  ++++  Y NS Y   A       +++
Sbjct: 114 LTDMALDDSALQGFFGIDRSDRDPTHARDAFRDFAQLLRSYPNSQYAADAYKRQVYLKDR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           L+  E+ + ++Y KRG YVA + R + ++ +Y D +   +A+  +  AY  L L  EA +
Sbjct: 174 LSKYELSVAQFYTKRGAYVAVVNRVEGMMRDYPDTQATHDALPLMENAYRQLQLNAEADK 233

Query: 249 VVSLIQER 256
           V  +I   
Sbjct: 234 VAKIIAAN 241


>gi|294339950|emb|CAZ88313.1| Competence lipoprotein comL precursor [Thiomonas sp. 3As]
          Length = 273

 Score =  255 bits (652), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 64/264 (24%), Positives = 113/264 (42%), Gaps = 19/264 (7%)

Query: 9   ICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL 68
           + ++  W  +L    L    ++ +  L G     S+D  L          ++Y +A   +
Sbjct: 3   VALYRLWTLRL----LGAAAAVVLLGLAGCASTPSKDETL-----GWSSAKLYAEAKDEM 53

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
              N  K  + + +    +P+  +A+++L+  A+  Y  G+  QA +  + ++  YP + 
Sbjct: 54  NSGNTDKGVKLYEKLESRYPYGLLAQQALIEIAYGNYKQGERAQALAAADRFLKLYPNNP 113

Query: 129 NVDYVYYLVGMSYAQMIRD----------VPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
             DYV YL G+      +              DQ A K   +    +V R+  S Y   A
Sbjct: 114 YTDYVLYLKGLINFNTNQGWFSFLSDQKLYERDQAAAKQSFESFKELVTRFPESKYAPDA 173

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
           R  +    N LA  E  +  +Y +RG YVAA  R Q  + +Y DA   + A+A LV+AY 
Sbjct: 174 RQRMRYIVNSLAEYETHVALFYYRRGAYVAAADRAQRAIEHYQDAPANQLALAILVDAYG 233

Query: 239 ALALMDEAREVVSLIQERYPQGYW 262
            L +     +   +++  YPQ  +
Sbjct: 234 KLGMTQLRDDAERVLKLNYPQSTY 257


>gi|186475731|ref|YP_001857201.1| putative competence lipoprotein, ComL [Burkholderia phymatum
           STM815]
 gi|184192190|gb|ACC70155.1| putative competence lipoprotein, ComL [Burkholderia phymatum
           STM815]
          Length = 285

 Score =  255 bits (652), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 61/272 (22%), Positives = 107/272 (39%), Gaps = 13/272 (4%)

Query: 1   MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
           M A+      + +  A++L + A     S+A   LV               T      ++
Sbjct: 1   MRALNIITQTVRKTVAHKLARKAALYGASVAAATLVAACHGLPEKTDE---TATWTNNKL 57

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +A   L   +F K  +YF       PF   A+++ +  A+  +   +   A      +
Sbjct: 58  YTEAQDALSGGDFGKCAKYFEALEGRDPFGHFAQQAQINVAYCNWKDSETDAADQAVNRF 117

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMI----------RDVPYDQRATKLMLQYMSRIVERYT 170
           I  +P+  ++ Y YYL GM +                   D ++ +        +V++Y 
Sbjct: 118 IQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPKSLRESYDAFKVVVDKYP 177

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            S Y   A   +    N LA+ EV    YY +RG YVAAI R QL +  Y +A   E+A+
Sbjct: 178 QSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYKNAPAIEDAL 237

Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
             ++ +Y  L     A +   ++   +P   +
Sbjct: 238 HIMMLSYQKLDQPQLAEDTKRVLAGTFPDSPY 269


>gi|299066638|emb|CBJ37831.1| putative lipoprotein, ComL family, tetratricopeptide repeats (TPR)
           domain [Ralstonia solanacearum CMR15]
          Length = 244

 Score =  255 bits (652), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 57/224 (25%), Positives = 102/224 (45%), Gaps = 10/224 (4%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           T      ++Y +A   L   ++SKA +Y+ +    +PF   A+++ + +A+  Y  G+  
Sbjct: 8   TAGWSANKLYSEAKDALDGGDYSKAVKYYEKLESRYPFGPFAQQAQIETAYANYKDGETA 67

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQY 161
            A +  + +I  +P   +VDY YYL G+                     D +A +     
Sbjct: 68  AALAAVDRFIQLHPNHPSVDYAYYLKGLINFNDNLGWLGRFSNQDLSERDPKAARAAYDA 127

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
              ++ R+ NS Y   A   +    N +A  EV+  RYY +RG Y+AA  R Q  + +Y 
Sbjct: 128 FKTLLARFPNSKYAPDAAQRMQYIVNAMAEHEVQAARYYYRRGAYLAATNRAQEAIKDYD 187

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
            A   EE +  ++++Y AL + D   +   +I++ YP   +  Y
Sbjct: 188 RAPAVEEGLYIMMKSYEALGMKDLRDDTERIIKQNYPNSDYLLY 231


>gi|293392745|ref|ZP_06637063.1| competence lipoprotein ComL [Serratia odorifera DSM 4582]
 gi|291424604|gb|EFE97815.1| competence lipoprotein ComL [Serratia odorifera DSM 4582]
          Length = 243

 Score =  255 bits (652), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 50/228 (21%), Positives = 98/228 (42%), Gaps = 15/228 (6%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              SS+D   D+        E+Y  A   L++ NF  A          +PF   +++  L
Sbjct: 19  GCSSSKDAVPDNPP-----SEIYANAQQKLQDGNFKGAITQLEALDNRYPFGPYSQQVQL 73

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV---------- 148
              +  Y +     A +  + ++   P   N+DYV Y+ G++   +              
Sbjct: 74  DLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVMYMRGLTDMALDDSALQGFFGVDRS 133

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
             D +  +   +  S+++++Y +S Y   A+  +   +++L+  E+ +  YY KRG YVA
Sbjct: 134 DRDPQHARAAFRDFSQLIQQYPSSQYTPDAQKRLVYLKDRLSKYELSVAEYYTKRGAYVA 193

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            + R + ++  Y D +   +A+  +  AY  L L  +A +V  +I   
Sbjct: 194 VVNRVEQMMREYPDTKATRDALPLMENAYKQLQLNGQADKVAKIIAAN 241


>gi|255318858|ref|ZP_05360084.1| DNA uptake lipoprotein [Acinetobacter radioresistens SK82]
 gi|262378884|ref|ZP_06072041.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
 gi|255304114|gb|EET83305.1| DNA uptake lipoprotein [Acinetobacter radioresistens SK82]
 gi|262300169|gb|EEY88081.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
          Length = 343

 Score =  255 bits (652), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 63/253 (24%), Positives = 112/253 (44%), Gaps = 15/253 (5%)

Query: 17  YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
           Y++   AL++  + A   LVG      ++V          ++  + KA   L+   +S A
Sbjct: 6   YKVTMLALSLGIASA---LVGCSSNPKKEVVDTGP--QSSEQVYFNKAERALERGQYSDA 60

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            +        FP    A+++ L   +V++    Y+ A +L E +I   P+  NVDY YY+
Sbjct: 61  AKQLEALDTYFPTGQYAQQAQLELLYVKFQQKDYEGAIALAERFIRLNPQHPNVDYAYYV 120

Query: 137 VGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
            G++  +           ++    D    K+  Q     + RY +S Y   A   +    
Sbjct: 121 RGVANMEQNYDGLLRYTSLQQSHRDVSYLKVAYQNFVDFIRRYPSSQYAVDAAQRMKFIG 180

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
            +LA  E+ + RY LKR  +VAA+ R Q V+ +Y       EA+A +  AY  L     +
Sbjct: 181 QELAENEMNVARYNLKRKAWVAALERAQWVVEHYPQTPQIPEALATMAYAYDKLGDQASS 240

Query: 247 REVVSLIQERYPQ 259
           ++ V +++  YP+
Sbjct: 241 QQYVEVLKLNYPE 253


>gi|325121170|gb|ADY80693.1| putative competence protein (ComL) [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 387

 Score =  255 bits (651), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 55/253 (21%), Positives = 108/253 (42%), Gaps = 14/253 (5%)

Query: 17  YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
           Y++   AL++  + A    VG     S+   +D+      ++  +EKA   L    +  A
Sbjct: 6   YKITVLALSLGVASAF---VGCSSNPSKKEVVDTGPQ-SSEQAYFEKAQKSLDRGQYLDA 61

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            +        +P    A+++ L   + ++    Y+ A +L E +I   P+  NVDY YY+
Sbjct: 62  TKSLEAIDTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYV 121

Query: 137 VGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
             ++  +           ++    D    K+  Q    ++ R+ +S Y   A   +    
Sbjct: 122 RAVANMEQNYDSLMRYTSLQQSHRDVSYLKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIG 181

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
            +LA  E+   R+ +KR  ++AA  R Q V+ +Y       EA+A L  +Y  L     +
Sbjct: 182 QELAENEMTAARFNVKRKAWIAAAERSQWVIEHYPQTPQIPEALATLAYSYDKLGDKATS 241

Query: 247 REVVSLIQERYPQ 259
           ++ + +++  YP 
Sbjct: 242 QQYIEVLKLNYPS 254


>gi|298368342|ref|ZP_06979660.1| competence lipoprotein ComL [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298282345|gb|EFI23832.1| competence lipoprotein ComL [Neisseria sp. oral taxon 014 str.
           F0314]
          Length = 267

 Score =  255 bits (651), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 58/242 (23%), Positives = 106/242 (43%), Gaps = 11/242 (4%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
               + + D     +T      ++Y +A   L   N+++A + +      FP    A++S
Sbjct: 16  ACASKGTVDKDA-QITQDWNVEKLYAEAQDELNSNNYTRAIKLYELLESRFPNGRYAQQS 74

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV-------- 148
            L +A+  Y   + ++A +  E +   +P+  N+DY  YL G+      +          
Sbjct: 75  QLDTAYAYYKDDEPEKALAAIERFQRHHPQHPNMDYALYLKGLVLFNEDQSFLNKLASQD 134

Query: 149 --PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
               D +A +   Q  S++V+ Y NS Y   A   +T   + L   E+ I RYY+KRG Y
Sbjct: 135 WSDRDPKANRDAYQAFSQLVQLYPNSKYAPDATERMTKLVDALGGNEIAIARYYMKRGAY 194

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
           +AAI R Q ++  Y +  + EE++A +  AY  L     A +   ++   +P   + +  
Sbjct: 195 LAAINRAQKIVEQYQNTRYVEESLAMMELAYKKLGKPQLAADSRRILAGNFPASPYLQKP 254

Query: 267 ET 268
             
Sbjct: 255 WR 256


>gi|120611899|ref|YP_971577.1| hypothetical protein Aave_3241 [Acidovorax citrulli AAC00-1]
 gi|120590363|gb|ABM33803.1| putative transmembrane protein [Acidovorax citrulli AAC00-1]
          Length = 265

 Score =  255 bits (651), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 68/257 (26%), Positives = 112/257 (43%), Gaps = 17/257 (6%)

Query: 19  LYKFALTIF-FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           + +F+L +    +A   L G           +  T       +Y +A   L   ++ KA 
Sbjct: 1   MPRFSLPLLTILLAAGVLAGCSST------PEDKTAGWSPNRIYSEARDELNSNSYDKAV 54

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
             F +         +A+++ L  A+ QY  G+  QA +  + ++  +P S   DY  YL 
Sbjct: 55  PLFEKLEGRAAGTPLAQQAQLEKAYAQYKGGEKAQAIATLDRFMKLHPASPAYDYALYLK 114

Query: 138 GMSYAQ----------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           G+                     DQ+A K   +    +  R+ +S Y + A+  +T   N
Sbjct: 115 GLVNFNDNLGLFSWLSRQDLSERDQKAAKDSFESFRELTTRFPDSRYARDAQQRMTYIVN 174

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
            LA  EV + RYY +RG YVAAI R Q+ LA+Y D    EEA+  L+++Y AL +     
Sbjct: 175 SLAQYEVHVARYYYQRGAYVAAINRAQIALADYKDVPALEEALYILIKSYDALGMTQLRD 234

Query: 248 EVVSLIQERYPQGYWAR 264
           +   ++   YPQ  + R
Sbjct: 235 DAQRVMAASYPQSEYMR 251


>gi|90022197|ref|YP_528024.1| Acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine
           O-acyltransferase [Saccharophagus degradans 2-40]
 gi|89951797|gb|ABD81812.1| competence lipoprotein ComL, putative [Saccharophagus degradans
           2-40]
          Length = 301

 Score =  255 bits (651), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 55/250 (22%), Positives = 105/250 (42%), Gaps = 16/250 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + KF L       +  L     +  +            ++++Y++A   L   ++  A E
Sbjct: 1   MRKFGLLGGLITIILVLSACASEKDKIA-------AGSEKDIYQRAQYALNHSSWDAAVE 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
           Y       +PF   A +S L   F  Y + +++ A +  + +I  +P+ ++VDY YY+ G
Sbjct: 54  YLQLLEEHYPFGVYAEQSQLELIFAYYQSDEHEAAIASADRFIRLHPQHRSVDYAYYMRG 113

Query: 139 MSYAQMIRDVP---------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
           ++       +           D    +    Y ++ + RY +SPY   A+  +   RN +
Sbjct: 114 VASFSNDTAITSFLPTDVTQRDIGTAREAFNYFNQFLNRYPDSPYALDAQKRMIYLRNTM 173

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           A  E+ +  YY KR  Y+AA  R + V+ N        + +A +   Y  L + + A + 
Sbjct: 174 ARSEIHVANYYFKREAYLAAANRGRYVVENMQGTPAVPDGLAVMAMGYHMLNMPELANDA 233

Query: 250 VSLIQERYPQ 259
           V ++   YP 
Sbjct: 234 VKVLIANYPN 243


>gi|114766759|ref|ZP_01445696.1| competence lipoprotein ComL, putative [Pelagibaca bermudensis
           HTCC2601]
 gi|114541016|gb|EAU44073.1| competence lipoprotein ComL, putative [Roseovarius sp. HTCC2601]
          Length = 275

 Score =  255 bits (651), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 73/246 (29%), Positives = 130/246 (52%), Gaps = 1/246 (0%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
           I  + +   L G   Q        ++  +    +++YE+    L  ++  +A  YF++  
Sbjct: 2   IGVAFSAILLAGCTAQEREGYARGNIPLETFSAQQIYERGEYELDRRDGEQAAYYFSEVE 61

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
           R +P++  ++++L+M A+  ++   Y+ + S  + YI  YP  ++  Y  YL+ +SY   
Sbjct: 62  RLYPYSEWSKRALIMQAYAFHTEKDYENSRSSAQRYIDFYPTDEDAAYAQYLLALSYYDQ 121

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
           I +V  DQ  T   LQ +  ++ERY  S Y + +     +  + LA KE+EIGRYYL+  
Sbjct: 122 IEEVGRDQGLTFQALQALRTVIERYPESEYARSSILKFDLAFDHLAGKEMEIGRYYLRDK 181

Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
            + AAI RF++V+ ++    H  EA+ RLVEAY++L L+ EA+   +++   Y    W R
Sbjct: 182 HFGAAISRFRVVVEDFQTTTHTPEALHRLVEAYLSLGLVQEAQSAGAILGYNYQGSEWYR 241

Query: 265 YVETLV 270
              TL+
Sbjct: 242 DSYTLL 247


>gi|85058560|ref|YP_454262.1| outer membrane protein assembly complex subunit YfiO [Sodalis
           glossinidius str. 'morsitans']
 gi|84779080|dbj|BAE73857.1| putative lipoprotein [Sodalis glossinidius str. 'morsitans']
          Length = 243

 Score =  255 bits (651), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 101/248 (40%), Gaps = 17/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +     L G    S++D   D+        E+Y  A   L++ N+  A +
Sbjct: 1   MMRMKYLVAAATLCLVLAGCS--SNKDAVPDNPP-----SEIYASAQQKLQDGNYKGAIK 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   A++  L   +  Y +     A +  + ++   P   NVDYV Y+ G
Sbjct: 54  ELEALDNRYPFGPYAQQVQLDLIYAYYKSADLPLAQASIDRFLRLNPTHPNVDYVLYMRG 113

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   +                +    +   +  ++++  Y NS Y   A   +   +++
Sbjct: 114 LTDMALDDSALQGFFGVDRSDRNPEHARAAFRDFTQLIRGYPNSQYAMDATKRLVYLKDR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E+ +  YY KRG YVA   R + +L ++ D +   +A+  + +AY  L L  +A +
Sbjct: 174 LAKHELSVVEYYDKRGAYVAVANRVEQMLRDFPDTQATRQALPYMEKAYRELQLSGQADK 233

Query: 249 VVSLIQER 256
           +  +    
Sbjct: 234 MSKIRAAN 241


>gi|304414307|ref|ZP_07395675.1| outer membrane protein assembly complex [Candidatus Regiella
           insecticola LSR1]
 gi|304283521|gb|EFL91917.1| outer membrane protein assembly complex [Candidatus Regiella
           insecticola LSR1]
          Length = 246

 Score =  254 bits (650), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 58/248 (23%), Positives = 105/248 (42%), Gaps = 17/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +I    L+G    +S DV  DS        E+Y  A   L+  NF  A  
Sbjct: 1   MKRIKYLVATAIWSLLLMGCS--NSNDVVPDSPP-----TELYTDAQQKLQSGNFQGAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF+  + +      +  Y +     A    + ++   P   N+DY+ YL G
Sbjct: 54  QLEALDSRYPFSAYSSQVQFDLIYAYYKSANLSMALVSIDRFMRLNPTHPNIDYMLYLRG 113

Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   +          I     D        +  ++++E Y +S Y   ++  +   +N+
Sbjct: 114 LTDMALDDSALQGLFGIDRSDRDPIYVLAAFRDFTQLIENYPDSQYATDSQKRLLYLKNR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E++I RYY KRG +VA + R + ++ NY D +   +A+  +  AY  L L ++A +
Sbjct: 174 LAKHELDIARYYTKRGAHVAVVNRIEQMMQNYPDTQATRDALPLMKNAYERLQLNEQADQ 233

Query: 249 VVSLIQER 256
           V  LI   
Sbjct: 234 VAKLIAAN 241


>gi|161524653|ref|YP_001579665.1| competence lipoprotein ComL [Burkholderia multivorans ATCC 17616]
 gi|189350590|ref|YP_001946218.1| putative lipoprotein [Burkholderia multivorans ATCC 17616]
 gi|221198060|ref|ZP_03571106.1| putative competence lipoprotein ComL [Burkholderia multivorans
           CGD2M]
 gi|221204382|ref|ZP_03577399.1| putative competence lipoprotein ComL [Burkholderia multivorans
           CGD2]
 gi|221212789|ref|ZP_03585765.1| putative competence lipoprotein ComL [Burkholderia multivorans
           CGD1]
 gi|160342082|gb|ABX15168.1| competence lipoprotein ComL [Burkholderia multivorans ATCC 17616]
 gi|189334612|dbj|BAG43682.1| putative lipoprotein [Burkholderia multivorans ATCC 17616]
 gi|221167002|gb|EED99472.1| putative competence lipoprotein ComL [Burkholderia multivorans
           CGD1]
 gi|221175239|gb|EEE07669.1| putative competence lipoprotein ComL [Burkholderia multivorans
           CGD2]
 gi|221181992|gb|EEE14393.1| putative competence lipoprotein ComL [Burkholderia multivorans
           CGD2M]
          Length = 274

 Score =  254 bits (650), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 14/236 (5%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G      +       T      ++Y +A   L   ++ K  +YF       PF   A+++
Sbjct: 27  GCHGLPQKQDE----TATWSNNKLYSEAQDALSGGDWGKCAKYFEALQGRDPFGHFAQQA 82

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------R 146
            +  A+  +   +   A    + +I  +P+  ++ Y YYL GM +               
Sbjct: 83  QINVAYCNWKDNEPAAADQAVDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQD 142

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
               D +A +        +V+RY  S Y   A   +    N LA+ EV    YY +RG Y
Sbjct: 143 MSERDPQALRESYDAFKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAY 202

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           VAAI R QL + +Y  A   E+A+  +V +Y  L     A +   ++   +P   +
Sbjct: 203 VAAINRAQLAIKDYKGAPAIEDALHIMVLSYQKLNQPQLAEDTKRVLAGTFPDSPY 258


>gi|107029026|ref|YP_626121.1| DNA uptake lipoprotein-like [Burkholderia cenocepacia AU 1054]
 gi|116689815|ref|YP_835438.1| DNA uptake lipoprotein-like protein [Burkholderia cenocepacia
           HI2424]
 gi|170733154|ref|YP_001765101.1| DNA uptake lipoprotein-like protein [Burkholderia cenocepacia
           MC0-3]
 gi|105898190|gb|ABF81148.1| DNA uptake lipoprotein-like protein [Burkholderia cenocepacia AU
           1054]
 gi|116647904|gb|ABK08545.1| DNA uptake lipoprotein-like protein [Burkholderia cenocepacia
           HI2424]
 gi|169816396|gb|ACA90979.1| DNA uptake lipoprotein-like protein [Burkholderia cenocepacia
           MC0-3]
          Length = 274

 Score =  254 bits (650), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 53/239 (22%), Positives = 96/239 (40%), Gaps = 14/239 (5%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
            + G      +       T      ++Y +A   L   ++ K  +YF       PF   A
Sbjct: 24  LIAGCHGLPQKQDE----TATWSNNKLYSEAQDALSGGDWGKCAKYFESLQGRDPFGHFA 79

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI-------- 145
           +++ +  A+  +   +   A    + +I  +P+  ++ Y YYL GM +            
Sbjct: 80  QQAQINVAYCNWKDNEAAAADQAVDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFS 139

Query: 146 --RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
                  D +A +        +V+R+  S Y   A   +    N LA+ EV    YY +R
Sbjct: 140 GQDMSERDPQALRESYDAFKVVVDRFPKSKYAPDAAARMRYIVNALASHEVHAADYYYRR 199

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           G YVAAI R QL + +Y  A   E+A+  ++ +Y  L   + A +   ++   +P   +
Sbjct: 200 GAYVAAINRAQLAIKDYKGAPAIEDALHIMILSYGKLNQPELAEDTKRVLAGTFPDSPY 258



 Score = 40.9 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 38/111 (34%), Gaps = 22/111 (19%)

Query: 80  FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125
           F      FP +  A  +               + +A   Y  G Y  A +  +  I  Y 
Sbjct: 158 FKVVVDRFPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKDYK 217

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            +  ++   +++ +SY ++ +         +L       +   + +SPYV 
Sbjct: 218 GAPAIEDALHIMILSYGKLNQ--------PELAEDTKRVLAGTFPDSPYVT 260


>gi|56696099|ref|YP_166453.1| competence lipoprotein ComL, putative [Ruegeria pomeroyi DSS-3]
 gi|56677836|gb|AAV94502.1| competence lipoprotein ComL, putative [Ruegeria pomeroyi DSS-3]
          Length = 284

 Score =  254 bits (650), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 76/238 (31%), Positives = 124/238 (52%), Gaps = 4/238 (1%)

Query: 33  CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
           C   G+   + R   LD  T      +++E+    L  +    A  YF++  R +P++  
Sbjct: 23  CGGGGFRTAADRSQNLDGYT----PEQIFERGEYELSAKRTEDAAYYFSEVERLYPYSNW 78

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           A+++L+M AF  +S   Y ++ +  + YI  YP  ++  Y  YL+ +SY   I +V  DQ
Sbjct: 79  AKRALIMQAFAYHSGKDYPESRAAAQRYIDFYPADEDAAYAQYLLALSYYDQIDEVGRDQ 138

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
             T   LQ +  ++E Y +S Y   A     +  + LAAKE+EIGRYYL+R  + AAI R
Sbjct: 139 GLTFQALQALRTVIEVYPDSEYATSAILKFDLAFDHLAAKEMEIGRYYLRRQHFSAAINR 198

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
           F++V+ ++    H  EA+ RLVEAY++L L  EA+   +++   Y    W      L+
Sbjct: 199 FRVVVEDFQTTTHTAEALHRLVEAYLSLGLEAEAQTAGAILGHNYQSSEWYEASYKLL 256


>gi|78066564|ref|YP_369333.1| DNA uptake lipoprotein-like [Burkholderia sp. 383]
 gi|77967309|gb|ABB08689.1| DNA uptake lipoprotein-like protein [Burkholderia sp. 383]
          Length = 274

 Score =  254 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 53/239 (22%), Positives = 95/239 (39%), Gaps = 14/239 (5%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
            + G      +       T      ++Y +A   L   ++ K  +YF       PF   A
Sbjct: 24  LIAGCHGLPQKQDE----TATWSNNKLYSEAQDALSGGDWGKCAKYFESLQGRDPFGHFA 79

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI-------- 145
           +++ +  A+  +   +   A    + +I  +P+  ++ Y YYL GM +            
Sbjct: 80  QQAQINVAYCNWKDNEAAAADQAVDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFS 139

Query: 146 --RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
                  D +A +        +V+R+  S Y   A   +    N LA+ EV    YY +R
Sbjct: 140 GQDMSERDPQALRESYDAFKVVVDRFPKSKYAPDAAARMRYIVNALASHEVHAADYYYRR 199

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           G YVAAI R QL + +Y  A   E+A+  ++ +Y  L     A +   ++   +P   +
Sbjct: 200 GAYVAAINRAQLAIKDYKGAPAIEDALHIMILSYGKLNQPQLAEDTKRVLAGTFPDSPY 258



 Score = 41.3 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 38/111 (34%), Gaps = 22/111 (19%)

Query: 80  FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125
           F      FP +  A  +               + +A   Y  G Y  A +  +  I  Y 
Sbjct: 158 FKVVVDRFPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKDYK 217

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            +  ++   +++ +SY ++ +         +L       +   + +SPYV 
Sbjct: 218 GAPAIEDALHIMILSYGKLNQ--------PQLAEDTKRVLAGTFPDSPYVT 260


>gi|254490941|ref|ZP_05104123.1| outer membrane assembly lipoprotein YfiO [Methylophaga thiooxidans
           DMS010]
 gi|224463850|gb|EEF80117.1| outer membrane assembly lipoprotein YfiO [Methylophaga thiooxydans
           DMS010]
          Length = 261

 Score =  254 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 60/233 (25%), Positives = 105/233 (45%), Gaps = 13/233 (5%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G       ++  D   +      VY +A   L   ++  A  Y+ Q    FPF   A+++
Sbjct: 19  GCSFFKKEEIKAD---ESWTVERVYSEANAALTLGDYETAITYYEQLEARFPFGEYAQQA 75

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------R 146
           LL SA+  Y     + A +  + ++  YP + N+DY  YL G++                
Sbjct: 76  LLESAYAHYKNDDPETAIATLDRFMRVYPLNPNIDYAIYLRGLTSFHRDIGFFEKYIPRD 135

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
           +   D  A +  L+    +V R+  S Y + +   +   RN+LA  EV +  YY++RG Y
Sbjct: 136 ESQRDPGAAEDALRDFKTLVTRFPQSRYAEDSTQRIVYLRNRLAQHEVNVANYYMRRGSY 195

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           +AA  R + VL NY       EA+  + +AY  L + D +++ + +++  YP 
Sbjct: 196 IAAANRGKYVLENYPRTPSMPEALVVMAKAYKVLDMHDLSQDALRVLELNYPG 248


>gi|212712903|ref|ZP_03321031.1| hypothetical protein PROVALCAL_04000 [Providencia alcalifaciens DSM
           30120]
 gi|212684448|gb|EEB43976.1| hypothetical protein PROVALCAL_04000 [Providencia alcalifaciens DSM
           30120]
          Length = 239

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 55/218 (25%), Positives = 100/218 (45%), Gaps = 10/218 (4%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           + V+      E+Y      L++ N++ A + F      +PF   A++  L   +  Y + 
Sbjct: 21  NEVSPDSSPAEIYSTGQQKLQDGNYNAAIKQFEALDNRYPFGPYAQQVQLDLIYAYYKSA 80

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLM 158
           +   A +  + ++   P   N+DYV Y+ G++   +          I     D +   + 
Sbjct: 81  ELPMAIASIDRFMRLNPTHPNIDYVLYMRGLTAMALDDSMLQGFFGIDRSDRDPQHALVA 140

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
            + +S++V  Y NSPY   A   +   +++LA  ++ +  YY KRG YVA + R Q +L 
Sbjct: 141 FKDLSQLVRYYPNSPYSNDASKRLVYLKDRLAKFDLSVVEYYNKRGAYVAVVNRVQQMLR 200

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           +Y D E   +A+  +  AY  + L  EA +V S+I   
Sbjct: 201 DYPDTEATRQALTYMEIAYKEMGLDKEANKVGSIIAAN 238


>gi|261346209|ref|ZP_05973853.1| competence lipoprotein ComL [Providencia rustigianii DSM 4541]
 gi|282565515|gb|EFB71050.1| competence lipoprotein ComL [Providencia rustigianii DSM 4541]
          Length = 242

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 54/218 (24%), Positives = 100/218 (45%), Gaps = 10/218 (4%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           + V+      E+Y      L++ N+S A + F      +PF   A++  L   +  Y + 
Sbjct: 24  NEVSPDSSPAEIYSTGQQKLQDGNYSAAIKQFEALDNRYPFGPYAQQVQLDLIYAYYKSA 83

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLM 158
           +   A +  + ++   P   N+DYV Y+ G++   +          I     D +   + 
Sbjct: 84  ELPMAIATIDRFMRLNPTHPNIDYVLYMRGLTAMALDDSMLQGFFGIDRSDRDPQHALVA 143

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
            + +S++V  Y NS Y   A   +   +++LA  ++ +  YY KRG YVA + R Q +L 
Sbjct: 144 FKDLSQLVRYYPNSQYSNDASKRLVYLKDRLAKFDLSVVEYYNKRGAYVAVVNRVQQMLR 203

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           +Y D E   +A+  +  AY  + L +EA +V S++   
Sbjct: 204 DYPDTEATRKALTYMEIAYKEMGLDNEANKVASILAAN 241


>gi|167950144|ref|ZP_02537218.1| competence lipoprotein ComL [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 271

 Score =  253 bits (648), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 57/222 (25%), Positives = 97/222 (43%), Gaps = 10/222 (4%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           T      + Y +A   + + ++  A EY+      +PF   A ++ L   +  Y   +  
Sbjct: 29  TKGWSASKFYSEAKSAMMDGDYDGAIEYYEGLEARYPFGRYATQAQLDIIYAHYKNSEPD 88

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQY 161
            A +  E +I  +P++  VDY YYL G++              I     D  A       
Sbjct: 89  SAIAAAERFIRLHPQNSYVDYAYYLKGLANFNRNHSITTRFIPIDSSQRDAGAALTSFSD 148

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
            + +V R+  S Y   AR  +   RN LA  ++ + RYY++RG Y+AA  R   V+AN+ 
Sbjct: 149 FAELVRRFPESKYASDARQRMIYLRNNLAKYQIHVARYYMRRGAYLAAANRANRVVANFQ 208

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
                +EA+  +V+AY  L L + A +   ++      G +A
Sbjct: 209 RTSVVDEALQIMVDAYTRLGLKNLAADAERVLALNRQNGLFA 250


>gi|319408816|emb|CBI82473.1| competence lipoprotein precursor [Bartonella schoenbuchensis R1]
          Length = 292

 Score =  253 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 84/217 (38%), Positives = 125/217 (57%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
                +Y +A+  L    F +A + F+   + + +    RKSL+M AFV Y   KY  A 
Sbjct: 50  DPPDVLYNQALTNLDLGRFDEALKKFSIIEKQYAYTEWGRKSLVMGAFVSYRLAKYDDAI 109

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
           S+ + YIT YP + +  Y YY+VG+S    IRDV  DQR TK  +  M  ++ERY NS Y
Sbjct: 110 SMAQRYITLYPNASDSAYAYYIVGLSSFHQIRDVTRDQRDTKRAIAAMQLLIERYPNSEY 169

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
           VK A+  +  GR QLA KE+++GRYY +  +Y+AA  RF+ V+  YSD    EEA+ RL 
Sbjct: 170 VKDAKDKIRFGREQLAGKEMQVGRYYEEGRQYLAASRRFRTVVEEYSDTNQIEEALFRLT 229

Query: 235 EAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           E  +AL L+ EA+   +++   YP+  W ++   L++
Sbjct: 230 EVNLALGLITEAQTAAAVLGRNYPESKWYKFSYDLLQ 266


>gi|192359694|ref|YP_001983660.1| competence protein ComL [Cellvibrio japonicus Ueda107]
 gi|190685859|gb|ACE83537.1| competence protein ComL [Cellvibrio japonicus Ueda107]
          Length = 327

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 57/221 (25%), Positives = 106/221 (47%), Gaps = 10/221 (4%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           +    V  + ++Y+ A   L    +  A +       +FPF   A ++ L   +  Y +G
Sbjct: 48  EKEPKVTTEADLYQAAERQLNNSQWQTAIKNLQTLEENFPFGTYAEQAQLELIYAYYMSG 107

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP----------YDQRATKLM 158
           +   A +    +I  +P+ +NVDY YY++GMS     + +            D  A +  
Sbjct: 108 EPDAAIATANRFIRLHPQHRNVDYAYYMLGMSSFTKDKGMFERVLPVDITRRDPGAARES 167

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
           L   ++++ RY +S Y   A+  +   RN LA  E+ +  YY KRG Y+AA+ R + VL 
Sbjct: 168 LANFTQLLNRYPDSAYAADAKKRMLFLRNLLARYEIHVANYYFKRGAYIAAVGRGRYVLE 227

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           N+       +A+A +V+ Y  +++  +A E++ +++  YP 
Sbjct: 228 NFPKTPAIPDALAVMVQGYRLMSMSTQADEMLEILRTNYPN 268



 Score = 35.9 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 27/70 (38%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           L   ++  AI   Q +  N+    +AE+A   L+ AY      D A    +     +PQ 
Sbjct: 67  LNNSQWQTAIKNLQTLEENFPFGTYAEQAQLELIYAYYMSGEPDAAIATANRFIRLHPQH 126

Query: 261 YWARYVETLV 270
               Y   ++
Sbjct: 127 RNVDYAYYML 136


>gi|27363949|ref|NP_759477.1| putative component of the lipoprotein assembly complex [Vibrio
           vulnificus CMCP6]
 gi|37678896|ref|NP_933505.1| putative lipoprotein [Vibrio vulnificus YJ016]
 gi|27360066|gb|AAO09004.1| Probable component of the lipoprotein assembly complex (forms a
           complex with YaeT, YfgL, and NlpB) [Vibrio vulnificus
           CMCP6]
 gi|37197637|dbj|BAC93476.1| putative lipoprotein [Vibrio vulnificus YJ016]
          Length = 241

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 57/242 (23%), Positives = 97/242 (40%), Gaps = 17/242 (7%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
           T+   +AV  L G    SS  +  D         E+Y +A   L+  N+  A E      
Sbjct: 5   TLAGLLAVSVLFGCS--SSEQIVPDVPP-----AELYAEAQTSLQGGNWLTAIEKLEALD 57

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
             +PF   + +  L   +  Y         +    +    P  + +D+V Y+ G+++   
Sbjct: 58  SRYPFGAYSEQVQLDLIYAYYKNDDLALGLATISRFTRLNPTHEKMDWVLYMRGLTHMAQ 117

Query: 145 ----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
                     I     D    K       +++ERY NSPY + ++  +   +N+LA  ++
Sbjct: 118 DRNFMHDLFNIDRSDRDPEPVKQAFDDFKKLLERYPNSPYAEDSQKRMFALKNRLAEYDL 177

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
               YYL+R  ++AAI R Q +   Y D   A +++   +EAY  L L D       LI+
Sbjct: 178 ATADYYLRREAWIAAINRSQELQKTYPDTIAARKSLKIQLEAYKQLGLQDAIARTEELIR 237

Query: 255 ER 256
             
Sbjct: 238 LN 239


>gi|167587071|ref|ZP_02379459.1| DNA uptake lipoprotein-like [Burkholderia ubonensis Bu]
          Length = 274

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 54/239 (22%), Positives = 94/239 (39%), Gaps = 14/239 (5%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
            + G      +       T      ++Y +A   L   ++ K  +YF       PF   A
Sbjct: 24  LIAGCHGLPQKQDE----TATWSNNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFA 79

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI-------- 145
           +++ +  A+  +   +   A    + +I  +P+  ++ Y YYL GM +            
Sbjct: 80  QQAQINVAYCNWKDNEPAAADQAVDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFS 139

Query: 146 --RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
                  D +A +        +V+RY  S Y   A   +    N LA+ EV    YY +R
Sbjct: 140 GQDMSERDPQALRESYDAFKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRR 199

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           G YVAAI R QL +  Y  A   E+A+  ++ +Y  L     A +   ++   +P   +
Sbjct: 200 GAYVAAINRAQLAIKEYKGAPAIEDALHIMILSYDKLQQPQLAEDTKRVLAGTFPDSPY 258



 Score = 42.0 bits (98), Expect = 0.079,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 39/111 (35%), Gaps = 22/111 (19%)

Query: 80  FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125
           F      +P +  A  +               + +A   Y  G Y  A +  +  I +Y 
Sbjct: 158 FKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYK 217

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            +  ++   +++ +SY ++        +  +L       +   + +SPYV 
Sbjct: 218 GAPAIEDALHIMILSYDKL--------QQPQLAEDTKRVLAGTFPDSPYVT 260


>gi|121594196|ref|YP_986092.1| hypothetical protein Ajs_1829 [Acidovorax sp. JS42]
 gi|120606276|gb|ABM42016.1| putative transmembrane protein [Acidovorax sp. JS42]
          Length = 300

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 63/224 (28%), Positives = 97/224 (43%), Gaps = 10/224 (4%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
            +  T      ++Y +A   L   ++ KA     +         +A+++ L  A+ QY  
Sbjct: 60  PEDKTAGWSTDKIYSEARDELNGGSYDKAVPLLEKLEGRAAGTPLAQQAQLEKAYAQYKG 119

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ----------MIRDVPYDQRATKL 157
           G+  QA +  + ++  +P S   DY  YL G+                     DQ+A K 
Sbjct: 120 GEKAQAIATLDRFMKLHPASPAYDYALYLKGLVNFNDNLGLFSWLSRQDLSERDQKAAKD 179

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
             +    +V R+  S Y   AR  +T   N LA  EV + RYY +RG YVAA+ R Q  +
Sbjct: 180 SFESFRELVTRFPESRYTPDARQRMTYIVNSLAQYEVHVARYYYERGAYVAAVSRAQSAV 239

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           A+Y D    EEA+  LV +Y AL L     +   ++   YPQ  
Sbjct: 240 ADYKDVPATEEALYILVRSYDALGLTQLRDDTRRVMDASYPQSS 283


>gi|260771764|ref|ZP_05880682.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio metschnikovii
           CIP 69.14]
 gi|260613056|gb|EEX38257.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio metschnikovii
           CIP 69.14]
          Length = 242

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 53/227 (23%), Positives = 93/227 (40%), Gaps = 14/227 (6%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
             SS++  +  V       E+Y  A   L+  N+  A +        +PF   + +  L 
Sbjct: 17  GCSSKEEIVPDVP----PAELYSDAQTSLQSGNWLTAIDKLEALDSRYPFGAYSEQVQLD 72

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVP 149
             +  Y         +  E +I   P  + +D+V Y+ G+++             I    
Sbjct: 73  LIYAYYKNDDLALGLATIERFIRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRSD 132

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
            D    K       R++ERY NS Y   A+  +   +N+LA  ++    +YL+R  ++AA
Sbjct: 133 RDPEPVKAAFADFKRLLERYPNSLYANDAQQRMIALKNRLAEYDLATADFYLRREAWIAA 192

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           I R Q +   Y   E A ++++  ++AY  L L D A     L+Q  
Sbjct: 193 INRTQELQKTYPGTEAARKSLSIQLKAYQQLGLTDAAERTKQLMQLN 239


>gi|329895228|ref|ZP_08270892.1| putative component of the lipoprotein assembly complex [gamma
           proteobacterium IMCC3088]
 gi|328922466|gb|EGG29808.1| putative component of the lipoprotein assembly complex [gamma
           proteobacterium IMCC3088]
          Length = 303

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 53/246 (21%), Positives = 111/246 (45%), Gaps = 15/246 (6%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L IF +  +  L         D   ++      ++++Y +A  +L+ +N+  A +   Q 
Sbjct: 20  LRIFLASCILLLGACASNDELDSQANAA-----EQQIYSEAQKYLRSKNYDMAIKALQQL 74

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +PF   A ++ L   +  Y A + + A      +I  +P+  ++DY +Y+ G++   
Sbjct: 75  ESRYPFGKYAEQAQLEIIYAHYGAYEPEAAIEAANRFIRLHPQHPSIDYAFYMKGLAAYS 134

Query: 144 MIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
              ++            D +  +      ++++ R+  S Y   AR  +   RN LA  E
Sbjct: 135 GNSNIFSRFLPTSESSRDTKHIEEAFTEFAQLLARFPESEYGADARARMVHLRNLLARHE 194

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +++  YY +RG Y+AA+ R + V+ NY  +    +A+A +   Y+ L + + A+  +  +
Sbjct: 195 IDVANYYFRRGAYLAAVNRGRYVIENYQGSTAMADALAVMAHGYLLLDMPELAQTSIDTL 254

Query: 254 QERYPQ 259
           +  YP 
Sbjct: 255 KVNYPD 260


>gi|254291984|ref|ZP_04962764.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|150422123|gb|EDN14090.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
          Length = 253

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 53/228 (23%), Positives = 93/228 (40%), Gaps = 15/228 (6%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              SS DV  D         ++Y +A   L+   +  A E        +PF   + +  L
Sbjct: 29  GCSSSPDVVPDVPP-----SQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQVQL 83

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV---------- 148
              +  Y         +  E +    P  + +D+V Y+ G+++    R+           
Sbjct: 84  DLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRR 143

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
             D    K       ++++RY NSPY + A+  +   +N+LA  ++    +YL+R  ++A
Sbjct: 144 DRDPEPVKAAFSDFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLRREAWIA 203

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           AI R Q +   Y D E A +++   +EAY  L L D       L+Q  
Sbjct: 204 AINRTQELQKTYPDTEAARKSLEIQLEAYQQLGLTDAIERTKQLMQLN 251


>gi|157803367|ref|YP_001491916.1| hypothetical protein A1E_00915 [Rickettsia canadensis str. McKiel]
 gi|157784630|gb|ABV73131.1| hypothetical protein A1E_00915 [Rickettsia canadensis str. McKiel]
          Length = 247

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 78/254 (30%), Positives = 137/254 (53%), Gaps = 8/254 (3%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           +L K  L++ F I +       +++S DV +   T       +Y + ++ L+++ + KA 
Sbjct: 2   KLAKL-LSVLFIIGLSLSGCKSKKNSDDVVVPIPT-------LYNEGIILLEKKKYKKAA 53

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           E F +     P   +  ++ LM A+  + A +Y++A  + + +I  +P + ++ Y YYL 
Sbjct: 54  EEFGRVFYQHPGNEMTPQAELMQAYSLFLATQYEEAVDVLDMFINLHPANVDIAYAYYLK 113

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
            +SY  +I DV +DQ  T L       I+E+++N+ Y   A   + +  + LA KE+ +G
Sbjct: 114 ALSYYMLISDVNHDQSRTFLAKDSFKDIIEKFSNTKYAIDASLKIDLVNDHLAGKEMMVG 173

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           R+YLK+   +AAI RF+ V+ +Y    H+ EA+ RL E+Y+ L L DEA++  S++   Y
Sbjct: 174 RFYLKKKNPIAAINRFEEVINHYQTTSHSVEALYRLAESYMMLGLPDEAKKYASVLGYNY 233

Query: 258 PQGYWARYVETLVK 271
           P   W  Y   LVK
Sbjct: 234 PDSQWYSYAYKLVK 247


>gi|269101903|ref|ZP_06154600.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Photobacterium
           damselae subsp. damselae CIP 102761]
 gi|268161801|gb|EEZ40297.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Photobacterium
           damselae subsp. damselae CIP 102761]
          Length = 242

 Score =  253 bits (646), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 55/243 (22%), Positives = 101/243 (41%), Gaps = 17/243 (6%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           LT+   +AV  L G    S+ +V  D         E+Y  A   L+  N+S+A E     
Sbjct: 4   LTLTTLLAVAILSGCS--STEEVVPDVPP-----SELYATAQESLQSGNWSQAIERLETL 56

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +PF   + +  L   +  Y       + +    ++   P +   D+V Y++G+++  
Sbjct: 57  DSRYPFGAYSDQVQLDLIYAYYKNDDLAMSEATINRFMRLNPINPKSDWVLYMLGLTHMA 116

Query: 144 MIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
             R              D  A +   +    +++RY NS Y   A+  +   +N+LA  +
Sbjct: 117 QDRSFMHDLFNVDRSDRDPTAARQAFRDFQVLLQRYPNSEYSADAKARMVFLKNRLANYD 176

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           + +  +Y++RG ++AAI R + V   Y D E A +++    +AY  L +  E       I
Sbjct: 177 LAVADFYIRRGAWIAAINRCEQVQRLYDDTEAARKSLLLEKKAYEKLGMQKEVERTQKSI 236

Query: 254 QER 256
              
Sbjct: 237 DLN 239


>gi|115351783|ref|YP_773622.1| competence lipoprotein ComL [Burkholderia ambifaria AMMD]
 gi|170703043|ref|ZP_02893870.1| competence lipoprotein ComL [Burkholderia ambifaria IOP40-10]
 gi|171320447|ref|ZP_02909480.1| competence lipoprotein ComL [Burkholderia ambifaria MEX-5]
 gi|172060754|ref|YP_001808406.1| competence lipoprotein ComL [Burkholderia ambifaria MC40-6]
 gi|115281771|gb|ABI87288.1| competence lipoprotein ComL [Burkholderia ambifaria AMMD]
 gi|170132051|gb|EDT00552.1| competence lipoprotein ComL [Burkholderia ambifaria IOP40-10]
 gi|171094307|gb|EDT39381.1| competence lipoprotein ComL [Burkholderia ambifaria MEX-5]
 gi|171993271|gb|ACB64190.1| competence lipoprotein ComL [Burkholderia ambifaria MC40-6]
          Length = 274

 Score =  253 bits (646), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 54/236 (22%), Positives = 94/236 (39%), Gaps = 14/236 (5%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G      +       T      ++Y +A   L   ++ K  +YF       PF   A+++
Sbjct: 27  GCHGLPQKQDE----TATWSNNKLYSEAQDALSGGDWGKCAKYFESLQGRDPFGHFAQQA 82

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------R 146
            +  A+  +   +   A    + +I  +P+  ++ Y YYL GM +               
Sbjct: 83  QINVAYCNWKDNEAAAADQAVDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFSGQD 142

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
               D +A +        +V+RY  S Y   A   +    N LA+ EV    YY +RG Y
Sbjct: 143 MSERDPQALRESYDAFKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAY 202

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           VAAI R QL + +Y  A   E+A+  ++ +Y  L     A +   ++   +P   +
Sbjct: 203 VAAINRAQLAIKDYKGAPAIEDALHIMILSYGKLNQPQLAEDTKRVLAGTFPDSPY 258


>gi|147675286|ref|YP_001216200.1| putative lipoprotein [Vibrio cholerae O395]
 gi|146317169|gb|ABQ21708.1| putative lipoprotein [Vibrio cholerae O395]
 gi|227012533|gb|ACP08743.1| conserved hypothetical protein [Vibrio cholerae O395]
          Length = 253

 Score =  252 bits (645), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 53/228 (23%), Positives = 93/228 (40%), Gaps = 15/228 (6%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              SS DV  D         ++Y +A   L+   +  A E        +PF   + +  L
Sbjct: 29  GCSSSPDVVPDVPP-----SQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQVQL 83

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV---------- 148
              +  Y         +  E +    P  + +D+V Y+ G+++    R+           
Sbjct: 84  DLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRR 143

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
             D    K       ++++RY NSPY + A+  +   +N+LA  ++    +YL+R  ++A
Sbjct: 144 DRDPEPVKAAFADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLRREAWIA 203

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           AI R Q +   Y D E A +++   +EAY  L L D       L+Q  
Sbjct: 204 AINRTQELQKTYPDTEAARQSLEIQLEAYQQLGLTDAVERTKQLMQLN 251


>gi|126640892|ref|YP_001083876.1| putative competence protein (ComL) [Acinetobacter baumannii ATCC
           17978]
          Length = 364

 Score =  252 bits (645), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 52/234 (22%), Positives = 101/234 (43%), Gaps = 11/234 (4%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
           +G     S+   +D+      ++  ++KA   L    +  A +        +P    A++
Sbjct: 1   MGCSSNPSKKEVVDTGPQ-SSEQAYFDKAQKALDRGQYLDATKSLEAIDTYYPTGQYAQQ 59

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------I 145
           + L   + ++    Y+ A +L E +I   P+  NVDY YY+ G+S  +M          +
Sbjct: 60  AQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYVRGVSNMEMNYDSLLRYTSL 119

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
           +    D    K+  Q    ++ R+ +S Y   A   +     +LA  E+   R+ +KR  
Sbjct: 120 QQSHRDVSYLKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQELAESEMNAARFNVKRKA 179

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           ++AA  R Q V+ +Y       EA+A L  +Y  L     +++ + +++  YP 
Sbjct: 180 WIAAAERSQWVIEHYPQTPQVPEALATLAYSYDQLGDKATSQQYIEVLKLNYPS 233


>gi|134295825|ref|YP_001119560.1| competence lipoprotein ComL [Burkholderia vietnamiensis G4]
 gi|134138982|gb|ABO54725.1| competence lipoprotein ComL [Burkholderia vietnamiensis G4]
          Length = 274

 Score =  252 bits (645), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 14/236 (5%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G      +       T      ++Y +A   L   ++ K  +YF       PF   A+++
Sbjct: 27  GCHGLPQKQDE----TATWSNNKLYSEAQDALSGGDWGKCAKYFESLQGRDPFGHFAQQA 82

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------R 146
            +  A+  +   +   A    + +I  +P+  ++ Y YYL GM +               
Sbjct: 83  QINVAYCNWKDNEAAAADQAVDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFSGQD 142

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
               D +A +        +V+RY  S Y   A   +    N LA+ EV    YY +RG Y
Sbjct: 143 MSERDPQALRESYDAFKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAY 202

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           VAAI R QL + +Y  A   E+A+  +V +Y  L     A +   ++   +P   +
Sbjct: 203 VAAINRAQLAIKDYKGAPAIEDALHIMVLSYGKLNQPQLAEDTKRVLAGTFPDSPY 258


>gi|15640727|ref|NP_230357.1| hypothetical protein VC0708 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121587776|ref|ZP_01677536.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|153801890|ref|ZP_01956476.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|153818714|ref|ZP_01971381.1| lipoprotein, putative [Vibrio cholerae NCTC 8457]
 gi|153822751|ref|ZP_01975418.1| lipoprotein, putative [Vibrio cholerae B33]
 gi|153826781|ref|ZP_01979448.1| lipoprotein, putative [Vibrio cholerae MZO-2]
 gi|153829373|ref|ZP_01982040.1| putative lipoprotein [Vibrio cholerae 623-39]
 gi|227080888|ref|YP_002809439.1| hypothetical protein VCM66_0666 [Vibrio cholerae M66-2]
 gi|229505674|ref|ZP_04395184.1| hypothetical protein VCF_000885 [Vibrio cholerae BX 330286]
 gi|229508753|ref|ZP_04398246.1| hypothetical protein VCE_000158 [Vibrio cholerae B33]
 gi|229512404|ref|ZP_04401878.1| hypothetical protein VCB_000044 [Vibrio cholerae TMA 21]
 gi|229519497|ref|ZP_04408940.1| hypothetical protein VCC_003527 [Vibrio cholerae RC9]
 gi|229519978|ref|ZP_04409408.1| hypothetical protein VIF_000494 [Vibrio cholerae TM 11079-80]
 gi|229530512|ref|ZP_04419900.1| hypothetical protein VCG_003632 [Vibrio cholerae 12129(1)]
 gi|229608692|ref|YP_002879340.1| hypothetical protein VCD_003614 [Vibrio cholerae MJ-1236]
 gi|254851038|ref|ZP_05240388.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|297580829|ref|ZP_06942755.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|298500819|ref|ZP_07010622.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|9655150|gb|AAF93873.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121548003|gb|EAX58083.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|124122601|gb|EAY41344.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|126510736|gb|EAZ73330.1| lipoprotein, putative [Vibrio cholerae NCTC 8457]
 gi|126519734|gb|EAZ76957.1| lipoprotein, putative [Vibrio cholerae B33]
 gi|148875156|gb|EDL73291.1| putative lipoprotein [Vibrio cholerae 623-39]
 gi|149739432|gb|EDM53672.1| lipoprotein, putative [Vibrio cholerae MZO-2]
 gi|227008776|gb|ACP04988.1| conserved hypothetical protein [Vibrio cholerae M66-2]
 gi|229332285|gb|EEN97773.1| hypothetical protein VCG_003632 [Vibrio cholerae 12129(1)]
 gi|229343030|gb|EEO08018.1| hypothetical protein VIF_000494 [Vibrio cholerae TM 11079-80]
 gi|229344186|gb|EEO09161.1| hypothetical protein VCC_003527 [Vibrio cholerae RC9]
 gi|229350554|gb|EEO15500.1| hypothetical protein VCB_000044 [Vibrio cholerae TMA 21]
 gi|229354277|gb|EEO19207.1| hypothetical protein VCE_000158 [Vibrio cholerae B33]
 gi|229357897|gb|EEO22814.1| hypothetical protein VCF_000885 [Vibrio cholerae BX 330286]
 gi|229371347|gb|ACQ61770.1| hypothetical protein VCD_003614 [Vibrio cholerae MJ-1236]
 gi|254846743|gb|EET25157.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|297535245|gb|EFH74080.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297540600|gb|EFH76658.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
          Length = 253

 Score =  252 bits (645), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 53/228 (23%), Positives = 93/228 (40%), Gaps = 15/228 (6%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              SS DV  D         ++Y +A   L+   +  A E        +PF   + +  L
Sbjct: 29  GCSSSPDVVPDVPP-----SQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQVQL 83

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV---------- 148
              +  Y         +  E +    P  + +D+V Y+ G+++    R+           
Sbjct: 84  DLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRR 143

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
             D    K       ++++RY NSPY + A+  +   +N+LA  ++    +YL+R  ++A
Sbjct: 144 DRDPEPVKAAFADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLRREAWIA 203

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           AI R Q +   Y D E A +++   +EAY  L L D       L+Q  
Sbjct: 204 AINRTQELQKTYPDTEAARKSLEIQLEAYQQLGLTDAIERTKQLMQLN 251


>gi|149201858|ref|ZP_01878832.1| Putative ComL lipoprotein [Roseovarius sp. TM1035]
 gi|149144906|gb|EDM32935.1| Putative ComL lipoprotein [Roseovarius sp. TM1035]
          Length = 265

 Score =  252 bits (645), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 67/237 (28%), Positives = 128/237 (54%), Gaps = 1/237 (0%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
            + G   + S +    +  +    ++++E+    L +++   A + F +  R +P++ +A
Sbjct: 2   VIAGCGERESVERGNVNY-ENYTAQQIFERGEYDLAQRDPDLAAKSFAEVERLYPYSDLA 60

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
           +++++M AF  +    Y+++ +  + +I  YP  ++  Y  YL+ +SY   I +V  DQ 
Sbjct: 61  KRAVIMQAFAHHQDKAYEESRAAAQRFIDFYPTDEDAAYAQYLLALSYYDQIDEVGRDQG 120

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
            T   LQ +  ++ERY +S Y   A     +  + LA+KE+EIGRYYLKR  + AA  RF
Sbjct: 121 LTFQALQSLREVIERYPDSEYANSAILKFDLAFDHLASKEMEIGRYYLKRDNFAAAANRF 180

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
           ++V+ ++    H  EA+ RLVE+Y++L L++EAR   +++   +    W      L+
Sbjct: 181 RVVVEDFQTTTHTAEALHRLVESYLSLGLVNEARTAGAILGHNFQGTDWYEDSYKLL 237


>gi|163802428|ref|ZP_02196321.1| NTPase [Vibrio sp. AND4]
 gi|159173729|gb|EDP58544.1| NTPase [Vibrio sp. AND4]
          Length = 242

 Score =  252 bits (645), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 55/242 (22%), Positives = 101/242 (41%), Gaps = 17/242 (7%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
           T+   +AV  L G     S++  +  V       E+Y  A   L+  N+  A E      
Sbjct: 5   TLIGLLAVSLLFGCA---SKEEIVPDVP----PSELYADAQTSLQSGNWLSAIEKLEALD 57

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
             +PF   + +  L   +  Y         +    ++   P  + +D+V Y+ G+S+   
Sbjct: 58  SRYPFGAYSEQVQLDLIYAYYKNDDLALGLATISRFMRLNPTHEKMDWVLYMRGLSHMAQ 117

Query: 145 IRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
            R+             D    K       +++ERY +SPY + ++  +   +N+LA  ++
Sbjct: 118 DRNFMHDLFNVDRSDRDPEPVKKAFGDFKKLLERYPSSPYAEDSQRRMVALKNRLANYDL 177

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
               +YL+R  ++AAI R Q +   + D E A +++   +EAY  L L D      +LI+
Sbjct: 178 ATADFYLRREAWIAAINRSQELQKAFPDTEAARKSLEIQLEAYKQLKLDDAVARTEALIK 237

Query: 255 ER 256
             
Sbjct: 238 LN 239


>gi|229525358|ref|ZP_04414763.1| hypothetical protein VCA_002980 [Vibrio cholerae bv. albensis
           VL426]
 gi|229338939|gb|EEO03956.1| hypothetical protein VCA_002980 [Vibrio cholerae bv. albensis
           VL426]
          Length = 253

 Score =  252 bits (645), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 94/228 (41%), Gaps = 15/228 (6%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              SS DV  D         ++Y +A   L+   +  A E        +PF   + +  L
Sbjct: 29  GCSSSPDVVPDVPP-----SQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQVQL 83

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV---------- 148
              +  Y         +  E +    P  + +D+V Y+ G+++    R+           
Sbjct: 84  DLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRR 143

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
             D    K       ++++RY NSPY + A+  +   +N+LA  ++    +YL+R  ++A
Sbjct: 144 DRDPEPVKAAFADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLRREAWIA 203

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           AI R Q +   Y D E A +++A  +EAY  L L D       L+Q  
Sbjct: 204 AINRTQELQKTYPDTEAARKSLAIQLEAYQQLGLTDAIERTKQLMQLN 251


>gi|293609057|ref|ZP_06691360.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292829630|gb|EFF87992.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 387

 Score =  252 bits (644), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 53/253 (20%), Positives = 107/253 (42%), Gaps = 14/253 (5%)

Query: 17  YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
           Y++   AL++  + A    VG     S+   +++      ++  +EKA   L    +  A
Sbjct: 6   YKITMLALSLGVASAF---VGCSSNPSKKEVVNTGPQ-SSEQAYFEKAQKSLDRGQYLDA 61

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            +        +P    A+++ L   + ++    Y+   +L E +I   P+  NVDY YY+
Sbjct: 62  TKSLEAIDTYYPTGQYAQQAQLELLYSKFKQKDYEGTIALAERFIRLNPQHPNVDYAYYV 121

Query: 137 VGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
             ++  +           ++    D    K+  Q    ++ R+ +S Y   A   +    
Sbjct: 122 RAVANMEQNYDSLMRYTSLQQSHRDVSYLKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIG 181

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
            +LA  E+   R+ +KR  ++AA  R Q V+ +Y       EA+A L  +Y  L     +
Sbjct: 182 QELAENEMTAARFNVKRKAWIAAAERSQWVIEHYPQTPQIPEALATLAYSYDKLGDKATS 241

Query: 247 REVVSLIQERYPQ 259
           ++ + +++  YP 
Sbjct: 242 QQYIEVLKLNYPS 254


>gi|330446993|ref|ZP_08310644.1| bamD [Photobacterium leiognathi subsp. mandapamensis svers.1.1.]
 gi|328491184|dbj|GAA05141.1| bamD [Photobacterium leiognathi subsp. mandapamensis svers.1.1.]
          Length = 242

 Score =  252 bits (644), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 55/243 (22%), Positives = 97/243 (39%), Gaps = 17/243 (6%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           LTI   +AV  L G    SS++  +  V        +Y  A   L+  N++ A E     
Sbjct: 4   LTITTLLAVALLSGC---SSKEEVIPDVP----PSNLYATAQTALQSGNWTSAIEQLEAL 56

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +PF   + +  L   +  Y +       +  E ++   P+    D+V Y+ G+++  
Sbjct: 57  DSRYPFGAYSDQVQLDLIYAYYKSDDLALGEATIERFLRLNPDHPQADWVVYMRGLTHMA 116

Query: 144 MIRD----------VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
             R              D   ++        ++ERY  S Y   A+  +   +N+LA  +
Sbjct: 117 QDRSFMHDMFNINRFDRDPTPSRQAFTDFKYLLERYPESEYGADAKARMIFLKNRLANYD 176

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +    +Y++R  ++AAI R Q V   Y D E A E++     AY  L L  E      ++
Sbjct: 177 LATADFYVRREAWIAAINRCQQVQRLYPDTEAARESLKLEKTAYEKLNLQKEVERTEKMM 236

Query: 254 QER 256
           +  
Sbjct: 237 KLN 239


>gi|294085893|ref|YP_003552653.1| competence lipoprotein ComL [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292665468|gb|ADE40569.1| competence lipoprotein ComL, putative [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 270

 Score =  252 bits (644), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 69/252 (27%), Positives = 118/252 (46%), Gaps = 6/252 (2%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K    I  +     + G       +         R   ++Y +A+      N  KA  
Sbjct: 1   MVKHIPLIVLASTALLVAGCSSTEVEEQV------ERPVEQLYNEALNTALAGNAKKAAP 54

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            F +  R  P++ +A ++ LM+A+  Y    Y +A +  + ++   P  + V+Y YYL  
Sbjct: 55  KFEEVERQHPYSSLAVRAQLMAAWAFYQDNNYPRAIAALDRFVELNPADERVEYAYYLKA 114

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           + Y + I DV  D   TKL +Q    +V R+ +  Y + A   + + R+ LA KE+ +GR
Sbjct: 115 LCYYEQIVDVQRDAEMTKLAMQAFEELVRRFPDGDYFRDATLKIDLTRSHLAGKEMAVGR 174

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           +YL +  Y AA+ RF+ V+ +Y       EA+ R+ EAY++L L  EA  V  +    YP
Sbjct: 175 FYLSKQHYGAALRRFENVVTDYDTTNQVPEALYRMTEAYLSLGLASEANRVEEVAVYNYP 234

Query: 259 QGYWARYVETLV 270
           +  W + +  L 
Sbjct: 235 KSIWTQRLLELR 246


>gi|89067817|ref|ZP_01155261.1| competence lipoprotein ComL, putative [Oceanicola granulosus
           HTCC2516]
 gi|89046415|gb|EAR52471.1| competence lipoprotein ComL, putative [Oceanicola granulosus
           HTCC2516]
          Length = 284

 Score =  252 bits (644), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 69/226 (30%), Positives = 115/226 (50%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           D       D     E++E+    L       A  YF +  R +P++  A+++L+M A   
Sbjct: 31  DPKQPGALDAYSAAEIFERGEYELARGQADDAAFYFGEIERLYPYSEFAKRALIMQAAAY 90

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           +    Y  A +  + +I  YP   +  Y  YL+ +SY   I ++  DQ  T   LQ +  
Sbjct: 91  HQDRDYPNARAAAQRFIDFYPADPDAAYAQYLLALSYYDQIDEIGRDQGLTFQALQALRT 150

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           ++E Y +S Y + A     +  + LAAKE+E+GR+YLKR  + AA+ RF++V+ ++    
Sbjct: 151 VIEVYPDSEYARAAIPKFDLAFDHLAAKEMEVGRFYLKRDHFAAAVNRFRVVVEDFQTTA 210

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
           H  EA+ RLVEAY++L L DEA+   +++   Y    W +    L+
Sbjct: 211 HTAEALHRLVEAYLSLGLTDEAQTAGAILGHNYRSTEWYQESFALL 256


>gi|227357803|ref|ZP_03842151.1| DNA uptake lipoprotein ComL [Proteus mirabilis ATCC 29906]
 gi|227161913|gb|EEI46931.1| DNA uptake lipoprotein ComL [Proteus mirabilis ATCC 29906]
          Length = 241

 Score =  251 bits (643), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 10/218 (4%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
              T      E+Y  +   L + N+  A +        +PF   +++  L   +  Y + 
Sbjct: 22  KDATADMSPSELYATSQEKLLDGNYGAAIKQLESLDNRYPFGPYSQQVQLDLIYAYYKSA 81

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLM 158
           +   A S  + ++   P   N+DYV Y+ G++   +          I     D +  ++ 
Sbjct: 82  ELPMAISAIDRFMRLNPTHPNIDYVLYMRGLTAQALDDSALQGFFGIDRSDRDPQHARVA 141

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
            +  S++V  Y +S Y   A   +   +N+LA  E+ + ++Y KRG YVA I R + ++ 
Sbjct: 142 FKDFSQLVRYYPDSLYTADATKRLVFLKNRLAKYELSVAKFYTKRGAYVAVINRVEQMMR 201

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           +Y D E   EA+  +  AY  L L  EA +V SLI   
Sbjct: 202 DYPDTEATREALVYMENAYKKLGLTQEADKVASLIAAN 239


>gi|71282332|ref|YP_270574.1| putative lipoprotein [Colwellia psychrerythraea 34H]
 gi|71148072|gb|AAZ28545.1| putative lipoprotein [Colwellia psychrerythraea 34H]
          Length = 252

 Score =  251 bits (643), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 57/253 (22%), Positives = 107/253 (42%), Gaps = 14/253 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K  + I  ++    L G    SS +  +D V D +  + ++  A   L    + KA +
Sbjct: 1   MDKLTVKIILTVLALALTGC---SSSENDIDKVPD-KSAQSLFVDARTALDNGLYQKAIQ 56

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   FPF  ++ +  L   +  Y +G   Q  +L + ++   P + N+DYVYY+  
Sbjct: 57  ILGAIDSRFPFGPISHQVQLDLIYAYYKSGDAAQGIALADRFLRLNPNNSNIDYVYYMRA 116

Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +               I     D  A++        IV  Y +S Y   +R  +   +++
Sbjct: 117 LINISTEENLFQDLAGIDRSDRDPEASRSAFNDFKSIVTDYPDSKYAADSRKRMISIKSR 176

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E+ + +YY+KR  Y +A  R + V+  +S +   E+A+  ++  Y  L L D  + 
Sbjct: 177 LAQYEIAVAKYYVKREAYASAANRARYVVEYFSPSPEIEQALEIMINCYDKLGLADLKKN 236

Query: 249 VVSLIQERYPQGY 261
            + ++   YP   
Sbjct: 237 ALQVLAANYPNNK 249


>gi|197284292|ref|YP_002150164.1| outer membrane protein assembly complex subunit YfiO [Proteus
           mirabilis HI4320]
 gi|194681779|emb|CAR40993.1| putative lipoprotein [Proteus mirabilis HI4320]
          Length = 244

 Score =  251 bits (643), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 10/218 (4%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
              T      E+Y  +   L + N+  A +        +PF   +++  L   +  Y + 
Sbjct: 25  KDATADMSPSELYATSQEKLLDGNYGAAIKQLESLDNRYPFGPYSQQVQLDLIYAYYKSA 84

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLM 158
           +   A S  + ++   P   N+DYV Y+ G++   +          I     D +  ++ 
Sbjct: 85  ELPMAISAIDRFMRLNPTHPNIDYVLYMRGLTAQALDDSALQGFFGIDRSDRDPQHARVA 144

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
            +  S++V  Y +S Y   A   +   +N+LA  E+ + ++Y KRG YVA I R + ++ 
Sbjct: 145 FKDFSQLVRYYPDSLYTADATKRLVFLKNRLAKYELSVAKFYTKRGAYVAVINRVEQMMR 204

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           +Y D E   EA+  +  AY  L L  EA +V SLI   
Sbjct: 205 DYPDTEATREALVYMENAYKKLGLTQEADKVASLIAAN 242


>gi|284007739|emb|CBA73553.1| lipoprotein [Arsenophonus nasoniae]
          Length = 269

 Score =  251 bits (643), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 58/232 (25%), Positives = 99/232 (42%), Gaps = 17/232 (7%)

Query: 35  LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94
           + G    S++D   +S        ++Y  +   L+  N+  A +        +PF   A+
Sbjct: 43  VTGCS--SNKDAVPES-----SPTDIYTSSQEKLQSGNYKGAIKLLETLDNRYPFGPYAQ 95

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS----------YAQM 144
           ++ L   +  Y + +   A +  + +I   P   N+DYV Y+ G++              
Sbjct: 96  QAQLDMIYAYYKSAELPLAIATIDRFIRLNPTHPNIDYVLYMRGLTAQALDDSALQDFFG 155

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
           I     D +   +  +  S++V  Y NS Y   A   +   + +LA  E+ I +YY KRG
Sbjct: 156 IDRSDRDPQHALVAFRDFSQLVRFYPNSIYATDASKRLAFLKERLAKYELAIVKYYNKRG 215

Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            YVA I R + +L NY D +    A+  +  AY  L L  E  +V +LI   
Sbjct: 216 AYVAVINRTEQMLKNYPDTQSTRNALKYMEIAYNQLGLSQEKNKVAALIAAN 267


>gi|167836419|ref|ZP_02463302.1| competence lipoprotein ComL [Burkholderia thailandensis MSMB43]
          Length = 274

 Score =  251 bits (643), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 55/236 (23%), Positives = 93/236 (39%), Gaps = 14/236 (5%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G      +       T      ++Y +A   L   ++ K  +YF       PF   A+++
Sbjct: 27  GCHGLPQKSDE----TATWSNNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQA 82

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------R 146
            +  A+  +   +   A    + +I  +P+  +V Y YYL GM +               
Sbjct: 83  QINVAYCNWKDNETASADQAVDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQD 142

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
               D +A +        +V+RY  S Y   A   +    N LA+ EV    YY +RG Y
Sbjct: 143 MSERDPQALRESYDAFKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAY 202

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           VAAI R QL +  Y +A   E+A+  +  +Y  L     A +   ++   +P   +
Sbjct: 203 VAAINRAQLAIKEYKNAPAIEDALHIMTLSYAKLNQPQLADDTKRVLASTFPDSPY 258



 Score = 43.6 bits (102), Expect = 0.030,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 22/111 (19%)

Query: 80  FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125
           F      +P +  A  +               + +A   Y  G Y  A +  +  I +Y 
Sbjct: 158 FKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYK 217

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            +  ++   +++ +SYA++ +         +L       +   + +SPYV 
Sbjct: 218 NAPAIEDALHIMTLSYAKLNQ--------PQLADDTKRVLASTFPDSPYVT 260


>gi|254224982|ref|ZP_04918596.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|125622369|gb|EAZ50689.1| conserved hypothetical protein [Vibrio cholerae V51]
          Length = 253

 Score =  251 bits (643), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 52/228 (22%), Positives = 93/228 (40%), Gaps = 15/228 (6%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              SS DV  D         ++Y +A   L+   +  A E        +PF   + +  L
Sbjct: 29  GCSSSPDVVPDVPP-----SQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQVQL 83

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV---------- 148
              +  Y         +  E +    P  + +D+V Y+ G+++    R+           
Sbjct: 84  DLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRR 143

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
             D    K       ++++RY NSPY + A+  +   +N+LA  ++    +YL+R  ++A
Sbjct: 144 DRDPEPVKAAFADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLRREAWIA 203

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           AI R Q +   Y + E A +++   +EAY  L L D       L+Q  
Sbjct: 204 AINRTQELQKTYPNTEAARKSLEIQLEAYQQLGLTDAIERTKQLMQLN 251


>gi|320157326|ref|YP_004189705.1| putative component of the lipoprotein assembly complex [Vibrio
           vulnificus MO6-24/O]
 gi|319932638|gb|ADV87502.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT, YfgL, and NlpB) [Vibrio vulnificus
           MO6-24/O]
          Length = 241

 Score =  251 bits (643), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 56/242 (23%), Positives = 97/242 (40%), Gaps = 17/242 (7%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
           T+   +AV  L G    SS  +  D         E+Y +A   L+  N+  A E      
Sbjct: 5   TLAGLLAVSVLFGCS--SSEQIVPDVPP-----AELYAEAQTSLQGGNWLTAIEKLEALD 57

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
             +PF   + +  L   +  Y         +    +    P  + +D+V Y+ G+++   
Sbjct: 58  SRYPFGAYSEQVQLDLIYAYYKNDDLALGLATISRFTRLNPTHEKMDWVLYMRGLTHMAQ 117

Query: 145 ----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
                     I     D    K       +++ERY +SPY + ++  +   +N+LA  ++
Sbjct: 118 DRNFMHDLFNIDRSDRDPEPVKQAFDDFKKLLERYPSSPYAEDSQKRMFALKNRLAEYDL 177

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
               YYL+R  ++AAI R Q +   Y D   A +++   +EAY  L L D       LI+
Sbjct: 178 ATADYYLRREAWIAAINRSQELQKTYPDTIAARKSLKIQLEAYKQLGLQDAIARTEELIR 237

Query: 255 ER 256
             
Sbjct: 238 LN 239


>gi|85703757|ref|ZP_01034861.1| Putative ComL lipoprotein [Roseovarius sp. 217]
 gi|85672685|gb|EAQ27542.1| Putative ComL lipoprotein [Roseovarius sp. 217]
          Length = 265

 Score =  251 bits (642), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 68/237 (28%), Positives = 129/237 (54%), Gaps = 1/237 (0%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
            + G   + S +    +  +    ++++E+    L +++   A   F +  R +P++ +A
Sbjct: 2   AIAGCGNKESVERGTVNY-ENYTAQQIFERGEYDLAQRDPELAATSFAEVERLYPYSDLA 60

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
           +++++M AF  + A +Y+++ +  + +I  YP  ++  Y  YL+ +SY   I +V  DQ 
Sbjct: 61  KRAVIMQAFAHHQAKEYEESRAAAQRFIDFYPTDEDAAYAQYLLALSYYDQIDEVGRDQG 120

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
            T   LQ +  ++ERY +S Y   A     +  + LA+KE+EIGRYYLKR  + AA  RF
Sbjct: 121 LTFQALQSLREVIERYPDSEYANAAILKFDLAFDHLASKEMEIGRYYLKRDNFAAAANRF 180

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
           ++V+ ++    H  EA+ RLVE+Y++L L++EAR   +++   +    W      L+
Sbjct: 181 RVVVEDFQTTTHTAEALHRLVESYLSLGLVNEARTAGAILGHNFQGTDWYEDSYKLL 237


>gi|294676385|ref|YP_003577000.1| competence lipoprotein ComL [Rhodobacter capsulatus SB 1003]
 gi|294475205|gb|ADE84593.1| competence lipoprotein ComL [Rhodobacter capsulatus SB 1003]
          Length = 281

 Score =  251 bits (642), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 75/229 (32%), Positives = 125/229 (54%), Gaps = 3/229 (1%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNF---SKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
              +   +     E+Y++    L+  N    ++A  YF++  R +P++  A+++L+M AF
Sbjct: 26  TQKEPPLENFTAEEIYKRGEYELEVGNPRRPAEALRYFSEVERLYPYSEYAKRALIMEAF 85

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
            Q+ A KY+ A S  + Y+  YP S++  Y  YL+ +SY   I +V  DQ  T   LQ +
Sbjct: 86  AQHKAKKYEDARSSAQRYLDTYPGSEDAAYAKYLLALSYYDQIDEVGRDQGLTFQALQAL 145

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
             ++E Y +S Y + A     +  + LA+KE+EIGR+YLK+G Y AAI RF++V+  Y  
Sbjct: 146 RAVIEEYPDSDYARSAALKFDLAFDHLASKEMEIGRFYLKKGHYTAAINRFRVVVEQYQT 205

Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
             H  EA+ RLVE Y++L L DEA+   +++   +    +       +K
Sbjct: 206 TTHTPEALMRLVECYLSLGLTDEAQTAGAILGHNFQSSPFYDDAYKRLK 254


>gi|50085932|ref|YP_047442.1| putative competence protein (ComL) [Acinetobacter sp. ADP1]
 gi|49531908|emb|CAG69620.1| putative competence protein (ComL) [Acinetobacter sp. ADP1]
          Length = 351

 Score =  251 bits (642), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 59/253 (23%), Positives = 115/253 (45%), Gaps = 15/253 (5%)

Query: 17  YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
           Y++   AL++  + A+   VG      ++V          ++  ++KA   L    +++A
Sbjct: 6   YKITMLALSLGVAAAM---VGCSSNPKKEVVDTGP--QSSEQIYFQKAEKALDRGQYTEA 60

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            +        +P    A ++ L   +V++   +Y+   S  + +I   P+  N+DYVYY+
Sbjct: 61  AKSLEAIDTYYPTGQYAAQAQLDLLYVKFQQKEYETVVSQADRFIRLNPQHPNIDYVYYI 120

Query: 137 VGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
            G++  ++          ++    D    KL  Q    ++ R+ +SPY   A   +    
Sbjct: 121 RGVANMELNYDSLMRYTSLQQSHRDTSYMKLAYQNFVDLIRRFPSSPYSVDAAQRMKFIG 180

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
            +LA  E+ + R+ +KR  +VAAI R Q V+ ++       EA+A L  AY  L     +
Sbjct: 181 QELAESEMNVARFNIKRKAWVAAIDRAQWVVEHFPQTPQTPEALATLAYAYNELGDQATS 240

Query: 247 REVVSLIQERYPQ 259
           ++ V+L++  YP 
Sbjct: 241 QQYVNLLKLNYPD 253


>gi|148259767|ref|YP_001233894.1| DNA uptake lipoprotein-like protein [Acidiphilium cryptum JF-5]
 gi|326403265|ref|YP_004283346.1| putative lipoprotein [Acidiphilium multivorum AIU301]
 gi|146401448|gb|ABQ29975.1| DNA uptake lipoprotein-like protein [Acidiphilium cryptum JF-5]
 gi|325050126|dbj|BAJ80464.1| putative lipoprotein [Acidiphilium multivorum AIU301]
          Length = 315

 Score =  251 bits (641), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 61/217 (28%), Positives = 107/217 (49%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           +    +Y   + +L +    KA   F +   ++P++  A  + L+  + +Y    +  A 
Sbjct: 77  KPASALYADGIAYLHKGENKKAARTFGEIEVNYPYSTWASHAELLQGYAEYREQNFDSAV 136

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
           S    +I  +P S    Y YYL  + + + I DV  DQ  T    Q +  ++ R+ +S Y
Sbjct: 137 SALNRFIELHPASPEAAYAYYLKALCFYEQIEDVQRDQTFTLEAAQALQDVISRFPDSAY 196

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
            + AR  + +  N+LA  ++E+GR+Y ++  Y AAI R+Q+V+  Y       EA+ RLV
Sbjct: 197 ARDARIKLRLVENRLAGHQMEVGRFYQRQNLYAAAISRYQVVVQQYQTTTFVPEALDRLV 256

Query: 235 EAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           E Y+ L L+ EAR   +++   YP   W R     ++
Sbjct: 257 ECYLDLGLVKEARRNAAVLGYNYPGSRWYRNAYATLR 293


>gi|227329205|ref|ZP_03833229.1| outer membrane protein assembly complex subunit YfiO
           [Pectobacterium carotovorum subsp. carotovorum WPP14]
          Length = 244

 Score =  251 bits (641), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 55/230 (23%), Positives = 98/230 (42%), Gaps = 16/230 (6%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G     S+D   DS        E+Y  A   L++ NF  A          +PF   +++ 
Sbjct: 19  GCSSN-SKDAVPDSPP-----SEIYANAQQKLQDGNFKAAITQLEALDNRYPFGPYSQQV 72

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV-------- 148
            L   +  Y + +   A +  + ++   P   NVDYV Y+ G++   +            
Sbjct: 73  QLDLIYAYYKSAELPLAQASIDRFLRLNPTHPNVDYVLYMRGLTDMALDDSALQGFFGVD 132

Query: 149 --PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
               D +  +   +  S++++ Y NS Y   A   +   + +LA  E+ + +YY KRG Y
Sbjct: 133 RSDRDPQYARTAFRDFSKLIQGYPNSQYATDANKRLVYLKERLAKYELSVAQYYTKRGAY 192

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           VA + R + +L +Y D +  + A+  +  AY  L L  +A +V  +I   
Sbjct: 193 VAVVNRVEQMLRDYPDTQATKTALPLMENAYRELQLAAQADKVAKVIAAN 242


>gi|15604057|ref|NP_220572.1| hypothetical protein RP183 [Rickettsia prowazekii str. Madrid E]
 gi|18203676|sp|Q9ZDY1|Y183_RICPR RecName: Full=UPF0169 lipoprotein RP183; Flags: Precursor
 gi|3860748|emb|CAA14649.1| unknown [Rickettsia prowazekii]
 gi|292571778|gb|ADE29693.1| DNA uptake lipoprotein [Rickettsia prowazekii Rp22]
          Length = 251

 Score =  251 bits (641), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 76/254 (29%), Positives = 130/254 (51%), Gaps = 8/254 (3%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           +L K  L+    I +       ++ S D+     T       +Y + ++ L ++ + KA 
Sbjct: 2   KLTKL-LSALLVIGLVLGGCKSKKDSNDIVAPIAT-------LYNEGIILLDKKKYKKAA 53

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           E F +     P   +  ++ LM A+  + A +Y++A  +   +I  +P + ++ Y YYL 
Sbjct: 54  EEFGKIFYQHPGNEMTPQAELMQAYSLFLAAQYEEAVDILNMFINLHPANIDIAYAYYLK 113

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
            +SY  +I DV +DQ  T L       ++ ++ N+ Y   +   + +  + LA KE+ IG
Sbjct: 114 ALSYYMLISDVNHDQSRTFLSKDSFEDVITKFPNTKYAIDSSLKIDLVNDHLAGKEMMIG 173

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           R+YLK+   +AAI RF+ V+ NY    H+ EA+ RLVE+Y+ L L DEA++  S++   Y
Sbjct: 174 RFYLKKKNPMAAINRFEEVIDNYQTTYHSVEALYRLVESYMMLGLHDEAKKYTSVLGYNY 233

Query: 258 PQGYWARYVETLVK 271
           P   W  Y   LVK
Sbjct: 234 PNSKWYSYAYRLVK 247


>gi|261820450|ref|YP_003258556.1| outer membrane protein assembly complex subunit YfiO
           [Pectobacterium wasabiae WPP163]
 gi|261604463|gb|ACX86949.1| outer membrane assembly lipoprotein YfiO [Pectobacterium wasabiae
           WPP163]
          Length = 244

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 55/230 (23%), Positives = 98/230 (42%), Gaps = 16/230 (6%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G     S+D   DS        E+Y  A   L++ NF  A          +PF   +++ 
Sbjct: 19  GCSGN-SKDAVPDSPP-----SEIYANAQQKLQDGNFKAAITQLEALDNRYPFGPYSQQV 72

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV-------- 148
            L   +  Y + +   A +  + ++   P   NVDYV Y+ G++   +            
Sbjct: 73  QLDLIYAYYKSAELPLAQASIDRFLRLNPTHPNVDYVLYMRGLTDMALDDSALQGFFGVD 132

Query: 149 --PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
               D +  +   +  S++++ Y NS Y   A   +   + +LA  E+ + +YY KRG Y
Sbjct: 133 RSDRDPQYARTAFRDFSKLIQGYPNSQYATDANKRLVYLKERLAKYELSVAQYYTKRGAY 192

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           VA + R + +L +Y D +  + A+  +  AY  L L  +A +V  +I   
Sbjct: 193 VAVVNRVEQMLRDYPDTQATKNALPLMESAYRELQLAAQADKVAKVIAAN 242


>gi|134095126|ref|YP_001100201.1| TPR repeat-containing protein [Herminiimonas arsenicoxydans]
 gi|133739029|emb|CAL62077.1| Competence lipoprotein ComL precursor [Herminiimonas
           arsenicoxydans]
          Length = 261

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 59/256 (23%), Positives = 110/256 (42%), Gaps = 20/256 (7%)

Query: 19  LYKFA-LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           + K   + + F ++ C L   +   +++             ++Y +A   +   N+ KA 
Sbjct: 1   MLKLTYIALAFLLSACSLTPDQIDETKN---------WSPSKLYSEAREEMNTGNYEKAV 51

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
            +F +    +PF   A+++ +  A+  Y  G   QA +  E +I  +P+  NVDY+YYL 
Sbjct: 52  SHFEKLESRYPFGTYAQQAQMEIAYAYYRQGDQPQALAAVERFIKLHPDHPNVDYMYYLR 111

Query: 138 GMSYAQ----------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           G+                     D +A +        + ER+ +S Y   A   +    N
Sbjct: 112 GLINFNDKVSVFDFLSRQDPTERDPKAAREAFDSFKLLTERFPDSKYTPDASARLAYLVN 171

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
            +A  +V +  YY +RG Y+AA  R Q  + NY  A  AE A+  ++++Y AL L     
Sbjct: 172 AMAQYDVHVANYYYRRGAYLAAANRAQAAVKNYPGAPAAEGALYVMIQSYDALNLPQLRD 231

Query: 248 EVVSLIQERYPQGYWA 263
           +   +++  +P   + 
Sbjct: 232 DAERVMKTNFPNSVYF 247


>gi|242240267|ref|YP_002988448.1| outer membrane protein assembly complex subunit YfiO [Dickeya
           dadantii Ech703]
 gi|242132324|gb|ACS86626.1| outer membrane assembly lipoprotein YfiO [Dickeya dadantii Ech703]
          Length = 243

 Score =  250 bits (640), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 56/228 (24%), Positives = 95/228 (41%), Gaps = 15/228 (6%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+D   D     R   E+Y  A   L+  NF  A          +PF   +++  L
Sbjct: 19  GCSNSKDTVPD-----RPPAELYATAQEKLQSGNFKAAITQLEALDNRYPFGPYSQQVQL 73

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV---------- 148
              +  Y +     A +  + +I   P   NVDYV Y+ G++   +              
Sbjct: 74  DLIYAYYKSADLSLAQASIDRFIRLNPTHPNVDYVLYMRGLTNMALDDSALQGFFGVDRS 133

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
             D +  +   +  S++V+ Y  S Y   A   +   + +LA  E  + +YY KRG YVA
Sbjct: 134 DRDPQYARSAFKAFSQLVQEYPRSQYATDASKRLAYIKERLAKYEFSVAQYYTKRGAYVA 193

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            + R + +L +Y D +   +A+  +  AY  L L+ EA +V  +I   
Sbjct: 194 VVNRVEQMLKDYPDTQATRKALPLMENAYRELQLVGEADKVAKIIAAN 241


>gi|167581725|ref|ZP_02374599.1| competence lipoprotein ComL [Burkholderia thailandensis TXDOH]
 gi|167619841|ref|ZP_02388472.1| competence lipoprotein ComL [Burkholderia thailandensis Bt4]
 gi|257138983|ref|ZP_05587245.1| competence lipoprotein ComL [Burkholderia thailandensis E264]
          Length = 274

 Score =  250 bits (640), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 14/236 (5%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G      +       T      ++Y +A   L   ++ K  +YF       PF   A+++
Sbjct: 27  GCHGLPQKSDE----TATWSNNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQA 82

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------R 146
            +  A+  +   +   A    + +I  +P+  +V Y YYL GM +               
Sbjct: 83  QINVAYCNWKDNETAAADQAVDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQD 142

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
               D +A +        +V+RY  S Y   A   +    N LA+ EV    YY +RG Y
Sbjct: 143 MSERDPQALRESYDAFKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAY 202

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           VAAI R QL +  Y +A   E+A+  ++ +Y  L     A +   ++   +P   +
Sbjct: 203 VAAINRAQLAIKEYKNAPAIEDALHIMMLSYAKLNQPQLADDTKRVLASTFPDSPY 258



 Score = 44.0 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 22/111 (19%)

Query: 80  FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125
           F      +P +  A  +               + +A   Y  G Y  A +  +  I +Y 
Sbjct: 158 FKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYK 217

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            +  ++   +++ +SYA++ +         +L       +   + +SPYV 
Sbjct: 218 NAPAIEDALHIMMLSYAKLNQ--------PQLADDTKRVLASTFPDSPYVT 260


>gi|53804664|ref|YP_113450.1| competence lipoprotein ComL [Methylococcus capsulatus str. Bath]
 gi|53758425|gb|AAU92716.1| competence lipoprotein ComL [Methylococcus capsulatus str. Bath]
          Length = 286

 Score =  250 bits (640), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 52/260 (20%), Positives = 98/260 (37%), Gaps = 16/260 (6%)

Query: 22  FALTIFFSIAVCFLVGWER------QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
             +      AV  L               D  +          + Y +A   + + ++ K
Sbjct: 8   VLIAALLGGAVSGLTACSSFPFWSAGKEEDTDIKDEHADWGPAQFYAEAKHAMMDGSYDK 67

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A + + +    +PF   A ++ +  AF  Y   + + A +  + +I   P   +VDY YY
Sbjct: 68  AIKLYEKLEARYPFGDYATQAQIDVAFCYYKNNEPESAIAAVDRFIKLNPTEPHVDYAYY 127

Query: 136 LVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           L G+                     D  + +        ++ ++ NS Y + AR      
Sbjct: 128 LRGLINYNRGIGFIDRWLPTDSSQRDPGSARDAYNDFETLLNKFPNSVYREDARQRAIAL 187

Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
           RN LA  ++ +  YY++R  YVAAI R   V+  Y   +    A+  + +AY  L +   
Sbjct: 188 RNNLAMYDIHVADYYMRRRAYVAAIRRSAEVVQKYQRTQAIPHALRIMEDAYRQLDMPQM 247

Query: 246 AREVVSLIQERYPQGYWARY 265
           A ++  +    Y +G  ++ 
Sbjct: 248 ADDIARVYALNYAEGRLSKD 267


>gi|227115224|ref|ZP_03828880.1| outer membrane protein assembly complex subunit YfiO
           [Pectobacterium carotovorum subsp. brasiliensis PBR1692]
          Length = 244

 Score =  250 bits (640), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 55/230 (23%), Positives = 98/230 (42%), Gaps = 16/230 (6%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G     S+D   DS        E+Y  A   L++ NF  A          +PF   +++ 
Sbjct: 19  GCSSN-SKDAVPDSPP-----SEIYANAQQKLQDGNFKAAITQLEALDNRYPFGPYSQQV 72

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV-------- 148
            L   +  Y + +   A +  + ++   P   NVDYV Y+ G++   +            
Sbjct: 73  QLDLIYAYYKSAELPLAQASIDRFLRLNPTHPNVDYVLYMRGLTDMALDDSALQGFFGVD 132

Query: 149 --PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
               D +  +   +  S++++ Y NS Y   A   +   + +LA  E+ + +YY KRG Y
Sbjct: 133 RSDRDPQYARTAFRDFSKLIQGYPNSQYATDANKRLVYLKERLAKYELSVAQYYTKRGAY 192

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           VA + R + +L +Y D +  + A+  +  AY  L L  +A +V  +I   
Sbjct: 193 VAVVNRVEQMLRDYPDTQATKNALPLMENAYRELQLAAQADKVAKIITAN 242


>gi|50122270|ref|YP_051437.1| outer membrane protein assembly complex subunit YfiO
           [Pectobacterium atrosepticum SCRI1043]
 gi|49612796|emb|CAG76246.1| putative lipoprotein [Pectobacterium atrosepticum SCRI1043]
          Length = 244

 Score =  250 bits (640), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 55/230 (23%), Positives = 98/230 (42%), Gaps = 16/230 (6%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G     S+D   DS        E+Y  A   L++ NF  A          +PF   +++ 
Sbjct: 19  GCSSN-SKDAVPDSPP-----SEIYANAQQKLQDGNFKAAITQLEALDNRYPFGPYSQQV 72

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV-------- 148
            L   +  Y + +   A +  + ++   P   NVDYV Y+ G++   +            
Sbjct: 73  QLDLIYAYYKSAELPLAQASIDRFLRLNPTHPNVDYVLYMRGLTDMALDDSALQGFFGVD 132

Query: 149 --PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
               D +  +   +  S++++ Y NS Y   A   +   + +LA  E+ + +YY KRG Y
Sbjct: 133 RSDRDPQYARTAFRDFSKLIQGYPNSQYATDANKRLVYLKERLAKYELSVAQYYTKRGAY 192

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           VA + R + +L +Y D +  + A+  +  AY  L L  +A +V  +I   
Sbjct: 193 VAVVNRVEQMLRDYPDTQATKNALPLMESAYRELQLAAQADKVAKVIAAN 242


>gi|262273644|ref|ZP_06051457.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Grimontia hollisae CIP
           101886]
 gi|262222059|gb|EEY73371.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Grimontia hollisae CIP
           101886]
          Length = 243

 Score =  250 bits (640), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 94/218 (43%), Gaps = 10/218 (4%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           + +       E+Y++A + L E N++ A +        +PF   + +  L   +  Y   
Sbjct: 22  EEIVPDIPPSELYQEAQVSLNEGNWNTAIQKLEALDSRYPFGAYSEQVQLDLIYAYYKND 81

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLM 158
                 +  + +I   P    +D+V Y+ G++     R +            D    +  
Sbjct: 82  DLALGEATIDRFIRMNPGHPEMDWVLYMRGLTNMAQDRSLVHDLLSMEREDRDPEPVRRA 141

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
                R+++RY +S Y   A   +   +N+LA  E+    +Y++R  +VA I R Q +  
Sbjct: 142 FVDFRRLLDRYPDSDYAADAAKRLVALKNRLADYELATADFYVRREAWVAVINRCQQIQR 201

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           ++ D   A+ ++  +++AY AL L + A+ +  L++  
Sbjct: 202 DFPDTNAAKRSLPMMLKAYEALKLEEPAQRIRELMKLN 239


>gi|134277813|ref|ZP_01764528.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           305]
 gi|226197143|ref|ZP_03792720.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           Pakistan 9]
 gi|237812528|ref|YP_002896979.1| competence lipoprotein ComL [Burkholderia pseudomallei MSHR346]
 gi|254197470|ref|ZP_04903892.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           S13]
 gi|254259639|ref|ZP_04950693.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           1710a]
 gi|134251463|gb|EBA51542.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           305]
 gi|169654211|gb|EDS86904.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           S13]
 gi|225930522|gb|EEH26532.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           Pakistan 9]
 gi|237504631|gb|ACQ96949.1| competence lipoprotein ComL [Burkholderia pseudomallei MSHR346]
 gi|254218328|gb|EET07712.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           1710a]
          Length = 280

 Score =  250 bits (640), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 14/236 (5%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G      +       T      ++Y +A   L   ++ K  +YF       PF   A+++
Sbjct: 33  GCHGLPQKSDE----TATWSNNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQA 88

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------R 146
            +  A+  +   +   A    + +I  +P+  +V Y YYL GM +               
Sbjct: 89  QINVAYCNWKDNETAAADQAVDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQD 148

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
               D +A +        +V+RY  S Y   A   +    N LA+ EV    YY +RG Y
Sbjct: 149 MSERDPQALRESYDAFKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAY 208

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           VAAI R QL +  Y +A   E+A+  ++ +Y  L     A +   ++   +P   +
Sbjct: 209 VAAINRAQLAIKEYKNAPAIEDALHIMMLSYAKLNQPQLADDTKRVLASTFPDSPY 264



 Score = 43.6 bits (102), Expect = 0.026,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 22/111 (19%)

Query: 80  FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125
           F      +P +  A  +               + +A   Y  G Y  A +  +  I +Y 
Sbjct: 164 FKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYK 223

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            +  ++   +++ +SYA++ +         +L       +   + +SPYV 
Sbjct: 224 NAPAIEDALHIMMLSYAKLNQ--------PQLADDTKRVLASTFPDSPYVT 266


>gi|126454430|ref|YP_001066470.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           1106a]
 gi|167719291|ref|ZP_02402527.1| competence lipoprotein ComL [Burkholderia pseudomallei DM98]
 gi|167738291|ref|ZP_02411065.1| competence lipoprotein ComL [Burkholderia pseudomallei 14]
 gi|167823888|ref|ZP_02455359.1| competence lipoprotein ComL [Burkholderia pseudomallei 9]
 gi|167845427|ref|ZP_02470935.1| competence lipoprotein ComL [Burkholderia pseudomallei B7210]
 gi|167893969|ref|ZP_02481371.1| competence lipoprotein ComL [Burkholderia pseudomallei 7894]
 gi|167902419|ref|ZP_02489624.1| competence lipoprotein ComL [Burkholderia pseudomallei NCTC 13177]
 gi|167918688|ref|ZP_02505779.1| competence lipoprotein ComL [Burkholderia pseudomallei BCC215]
 gi|217421678|ref|ZP_03453182.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           576]
 gi|242317204|ref|ZP_04816220.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           1106b]
 gi|254297449|ref|ZP_04964902.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           406e]
 gi|126228072|gb|ABN91612.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           1106a]
 gi|157807603|gb|EDO84773.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           406e]
 gi|217395420|gb|EEC35438.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           576]
 gi|242140443|gb|EES26845.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           1106b]
          Length = 274

 Score =  250 bits (640), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 14/236 (5%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G      +       T      ++Y +A   L   ++ K  +YF       PF   A+++
Sbjct: 27  GCHGLPQKSDE----TATWSNNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQA 82

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------R 146
            +  A+  +   +   A    + +I  +P+  +V Y YYL GM +               
Sbjct: 83  QINVAYCNWKDNETAAADQAVDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQD 142

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
               D +A +        +V+RY  S Y   A   +    N LA+ EV    YY +RG Y
Sbjct: 143 MSERDPQALRESYDAFKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAY 202

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           VAAI R QL +  Y +A   E+A+  ++ +Y  L     A +   ++   +P   +
Sbjct: 203 VAAINRAQLAIKEYKNAPAIEDALHIMMLSYAKLNQPQLADDTKRVLASTFPDSPY 258



 Score = 43.6 bits (102), Expect = 0.026,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 22/111 (19%)

Query: 80  FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125
           F      +P +  A  +               + +A   Y  G Y  A +  +  I +Y 
Sbjct: 158 FKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYK 217

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            +  ++   +++ +SYA++ +         +L       +   + +SPYV 
Sbjct: 218 NAPAIEDALHIMMLSYAKLNQ--------PQLADDTKRVLASTFPDSPYVT 260


>gi|53719165|ref|YP_108151.1| putative lipoprotein [Burkholderia pseudomallei K96243]
 gi|167815477|ref|ZP_02447157.1| putative lipoprotein [Burkholderia pseudomallei 91]
 gi|167910660|ref|ZP_02497751.1| putative lipoprotein [Burkholderia pseudomallei 112]
 gi|52209579|emb|CAH35532.1| putative lipoprotein [Burkholderia pseudomallei K96243]
          Length = 274

 Score =  250 bits (640), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 14/236 (5%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G      +       T      ++Y +A   L   ++ K  +YF       PF   A+++
Sbjct: 27  GCHGLPQKSDE----TATWSNNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQA 82

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------R 146
            +  A+  +   +   A    + +I  +P+  +V Y YYL GM +               
Sbjct: 83  QINVAYCNWKDNETAAADQAVDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQD 142

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
               D +A +        +V+RY  S Y   A   +    N LA+ EV    YY +RG Y
Sbjct: 143 MSERDPQALRESYDAFRAVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAY 202

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           VAAI R QL +  Y +A   E+A+  ++ +Y  L     A +   ++   +P   +
Sbjct: 203 VAAINRAQLAIKEYKNAPAIEDALHIMMLSYAKLNQPQLADDTKRVLASTFPDSPY 258



 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 22/111 (19%)

Query: 80  FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125
           F      +P +  A  +               + +A   Y  G Y  A +  +  I +Y 
Sbjct: 158 FRAVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYK 217

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            +  ++   +++ +SYA++ +         +L       +   + +SPYV 
Sbjct: 218 NAPAIEDALHIMMLSYAKLNQ--------PQLADDTKRVLASTFPDSPYVT 260


>gi|254189037|ref|ZP_04895548.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           Pasteur 52237]
 gi|157936716|gb|EDO92386.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           Pasteur 52237]
          Length = 274

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 14/236 (5%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G      +       T      ++Y +A   L   ++ K  +YF       PF   A+++
Sbjct: 27  GCHGLPQKSDE----TATWSNNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQA 82

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------R 146
            +  A+  +   +   A    + +I  +P+  +V Y YYL GM +               
Sbjct: 83  QINVAYCNWKDNETAAADQAVDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQD 142

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
               D +A +        +V+RY  S Y   A   +    N LA+ EV    YY +RG Y
Sbjct: 143 MSERDPQALRESYDAFKAVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAY 202

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           VAAI R QL +  Y +A   E+A+  ++ +Y  L     A +   ++   +P   +
Sbjct: 203 VAAINRAQLAIKEYKNAPAIEDALHIMMLSYAKLNQPQLADDTKRVLASTFPDSPY 258



 Score = 45.5 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 22/111 (19%)

Query: 80  FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125
           F      +P +  A  +               + +A   Y  G Y  A +  +  I +Y 
Sbjct: 158 FKAVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYK 217

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            +  ++   +++ +SYA++ +         +L       +   + +SPYV 
Sbjct: 218 NAPAIEDALHIMMLSYAKLNQ--------PQLADDTKRVLASTFPDSPYVT 260


>gi|260221243|emb|CBA29611.1| Competence lipoprotein comL [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 268

 Score =  250 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 57/254 (22%), Positives = 102/254 (40%), Gaps = 18/254 (7%)

Query: 21  KFALTIFFSIA--VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           K ++     +      L G              T       +Y +A   +    + KA  
Sbjct: 5   KLSVVCATMLTTMATLLAGCSSAPVDK------TAGMSPNRLYAEAKDEMGASQWDKAVP 58

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
              +         +A+++ L  A+ Q+ AG+  Q+ +  E +I  +P S  +DY  YL G
Sbjct: 59  LLEKLEARAAGTPLAQQAQLDKAYAQFKAGEQAQSLATLERFIKLHPASPALDYAIYLRG 118

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +        +            DQ+A K   +    +  R+ +S Y   A+  +      
Sbjct: 119 IVNFNDDLGLLSSITRQDLAERDQKAAKESFESFKELTTRFPDSKYAPDAQQRMNYIVGS 178

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  EV + +YY KRG Y+AA  R Q  + +Y D    EEA+  L ++Y AL +     +
Sbjct: 179 LAQYEVHVAKYYYKRGAYLAAANRAQQCITDYRDVPATEEALFILYKSYDALGMEQLRDD 238

Query: 249 VVSLIQERYPQGYW 262
              ++++ +PQ  +
Sbjct: 239 AKRVLEKNFPQSDF 252


>gi|254419865|ref|ZP_05033589.1| outer membrane assembly lipoprotein YfiO [Brevundimonas sp. BAL3]
 gi|196186042|gb|EDX81018.1| outer membrane assembly lipoprotein YfiO [Brevundimonas sp. BAL3]
          Length = 284

 Score =  250 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 63/261 (24%), Positives = 118/261 (45%), Gaps = 6/261 (2%)

Query: 12  FEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ 71
                 ++    + +  + A   + G    +          + R    +Y      L+++
Sbjct: 3   SSLSVSKIRSGLVLMAAAAAAMTIAGCAGNA----RPKLAYEERPVEALYNTGYQRLEQR 58

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
            ++ A +YF +  R  P++  AR+S+LM  +  Y    Y  A +  + +I+ +P + +  
Sbjct: 59  RWADAVDYFQEVERQHPYSDWARRSILMQVYAFYQNNNYADAIAASDRFISLFPGNPSAA 118

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
           Y +Y+  +   + I DV  DQ      L  +  +  RY  +PY   A   + +  +QLA 
Sbjct: 119 YAFYMKAVCNFEQITDVGRDQGYANAALAGLKDVARRYPGTPYASDAAVKIDMVNDQLAG 178

Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLAN--YSDAEHAEEAMARLVEAYVALALMDEAREV 249
           KE+ IGRYY +  + +AA+ R++ V+AN  +    H  EA+ RLVE  + L L +EA   
Sbjct: 179 KEMNIGRYYQRANQPLAALNRYKAVIANPEFQRTSHTPEALYRLVEVNLQLGLKEEATRN 238

Query: 250 VSLIQERYPQGYWARYVETLV 270
            +++   +P   W      L+
Sbjct: 239 GAVLGYNFPGSPWYAEAYALL 259


>gi|254179572|ref|ZP_04886171.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           1655]
 gi|184210112|gb|EDU07155.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           1655]
          Length = 274

 Score =  250 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 14/236 (5%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G      +       T      ++Y +A   L   ++ K  +YF       PF   A+++
Sbjct: 27  GCHGLPQKSDE----TATWSNNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQA 82

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------R 146
            +  A+  +   +   A    + +I  +P+  +V Y YYL GM +               
Sbjct: 83  QINVAYCNWKDNETAAADQAVDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQD 142

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
               D +A +        +V+RY  S Y   A   +    N LA+ EV    YY +RG Y
Sbjct: 143 MSERDPQALRESYDAFKAVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAY 202

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           VAAI R QL +  Y +A   E+A+  ++ +Y  L     A +   ++   +P   +
Sbjct: 203 VAAINRAQLAIKEYKNAPAIEDALHIMMLSYAKLNQPQLADDTKRVLASTFPDSPY 258



 Score = 45.1 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 22/111 (19%)

Query: 80  FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125
           F      +P +  A  +               + +A   Y  G Y  A +  +  I +Y 
Sbjct: 158 FKAVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYK 217

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            +  ++   +++ +SYA++ +         +L       +   + +SPYV 
Sbjct: 218 NAPAIEDALHIMMLSYAKLNQ--------PQLADDTKRVLASTFPDSPYVT 260


>gi|121599824|ref|YP_993133.1| competence lipoprotein ComL [Burkholderia mallei SAVP1]
 gi|124384405|ref|YP_001026091.1| competence lipoprotein ComL [Burkholderia mallei NCTC 10229]
 gi|126449169|ref|YP_001080639.1| competence lipoprotein ComL [Burkholderia mallei NCTC 10247]
 gi|167002221|ref|ZP_02268011.1| competence lipoprotein ComL [Burkholderia mallei PRL-20]
 gi|238562639|ref|ZP_00440110.2| competence lipoprotein ComL [Burkholderia mallei GB8 horse 4]
 gi|254178609|ref|ZP_04885264.1| competence lipoprotein ComL [Burkholderia mallei ATCC 10399]
 gi|254199930|ref|ZP_04906296.1| competence lipoprotein ComL [Burkholderia mallei FMH]
 gi|254206263|ref|ZP_04912615.1| competence lipoprotein ComL [Burkholderia mallei JHU]
 gi|254358322|ref|ZP_04974595.1| competence lipoprotein ComL [Burkholderia mallei 2002721280]
 gi|121228634|gb|ABM51152.1| competence lipoprotein ComL [Burkholderia mallei SAVP1]
 gi|124292425|gb|ABN01694.1| competence lipoprotein ComL [Burkholderia mallei NCTC 10229]
 gi|126242039|gb|ABO05132.1| competence lipoprotein ComL [Burkholderia mallei NCTC 10247]
 gi|147749526|gb|EDK56600.1| competence lipoprotein ComL [Burkholderia mallei FMH]
 gi|147753706|gb|EDK60771.1| competence lipoprotein ComL [Burkholderia mallei JHU]
 gi|148027449|gb|EDK85470.1| competence lipoprotein ComL [Burkholderia mallei 2002721280]
 gi|160699648|gb|EDP89618.1| competence lipoprotein ComL [Burkholderia mallei ATCC 10399]
 gi|238522243|gb|EEP85689.1| competence lipoprotein ComL [Burkholderia mallei GB8 horse 4]
 gi|243062039|gb|EES44225.1| competence lipoprotein ComL [Burkholderia mallei PRL-20]
          Length = 274

 Score =  250 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 14/236 (5%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G      +       T      ++Y +A   L   ++ K  +YF       PF   A+++
Sbjct: 27  GCHGLPQKSDE----TATWSNNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQA 82

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------R 146
            +  A+  +   +   A    + +I  +P+  +V Y YYL GM +               
Sbjct: 83  QINVAYCNWKDNETATADQAVDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQD 142

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
               D +A +        +V+RY  S Y   A   +    N LA+ EV    YY +RG Y
Sbjct: 143 MSERDPQALRESYDAFKAVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAY 202

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           VAAI R QL +  Y +A   E+A+  ++ +Y  L     A +   ++   +P   +
Sbjct: 203 VAAINRAQLAIKEYKNAPAIEDALHIMMLSYAKLNQPQLADDTKRVLASTFPDSPY 258



 Score = 45.5 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 22/111 (19%)

Query: 80  FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125
           F      +P +  A  +               + +A   Y  G Y  A +  +  I +Y 
Sbjct: 158 FKAVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYK 217

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            +  ++   +++ +SYA++ +         +L       +   + +SPYV 
Sbjct: 218 NAPAIEDALHIMMLSYAKLNQ--------PQLADDTKRVLASTFPDSPYVT 260


>gi|53723512|ref|YP_102985.1| competence lipoprotein ComL [Burkholderia mallei ATCC 23344]
 gi|52426935|gb|AAU47528.1| competence lipoprotein ComL [Burkholderia mallei ATCC 23344]
          Length = 280

 Score =  250 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 14/236 (5%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G      +       T      ++Y +A   L   ++ K  +YF       PF   A+++
Sbjct: 33  GCHGLPQKSDE----TATWSNNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQA 88

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------R 146
            +  A+  +   +   A    + +I  +P+  +V Y YYL GM +               
Sbjct: 89  QINVAYCNWKDNETATADQAVDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQD 148

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
               D +A +        +V+RY  S Y   A   +    N LA+ EV    YY +RG Y
Sbjct: 149 MSERDPQALRESYDAFKAVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAY 208

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           VAAI R QL +  Y +A   E+A+  ++ +Y  L     A +   ++   +P   +
Sbjct: 209 VAAINRAQLAIKEYKNAPAIEDALHIMMLSYAKLNQPQLADDTKRVLASTFPDSPY 264



 Score = 45.5 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 22/111 (19%)

Query: 80  FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125
           F      +P +  A  +               + +A   Y  G Y  A +  +  I +Y 
Sbjct: 164 FKAVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYK 223

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            +  ++   +++ +SYA++ +         +L       +   + +SPYV 
Sbjct: 224 NAPAIEDALHIMMLSYAKLNQ--------PQLADDTKRVLASTFPDSPYVT 266


>gi|262170004|ref|ZP_06037694.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio cholerae RC27]
 gi|262021738|gb|EEY40449.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio cholerae RC27]
          Length = 241

 Score =  250 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 53/228 (23%), Positives = 93/228 (40%), Gaps = 15/228 (6%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              SS DV  D         ++Y +A   L+   +  A E        +PF   + +  L
Sbjct: 17  GCSSSPDVVPDVPP-----SQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQVQL 71

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV---------- 148
              +  Y         +  E +    P  + +D+V Y+ G+++    R+           
Sbjct: 72  DLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRR 131

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
             D    K       ++++RY NSPY + A+  +   +N+LA  ++    +YL+R  ++A
Sbjct: 132 DRDPEPVKAAFADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLRREAWIA 191

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           AI R Q +   Y D E A +++   +EAY  L L D       L+Q  
Sbjct: 192 AINRTQELQKTYPDTEAARQSLEIQLEAYQQLGLTDAVERTKQLMQLN 239


>gi|319763345|ref|YP_004127282.1| outer membrane assembly lipoprotein yfio [Alicycliphilus
           denitrificans BC]
 gi|330825579|ref|YP_004388882.1| outer membrane assembly lipoprotein YfiO [Alicycliphilus
           denitrificans K601]
 gi|317117906|gb|ADV00395.1| outer membrane assembly lipoprotein YfiO [Alicycliphilus
           denitrificans BC]
 gi|329310951|gb|AEB85366.1| outer membrane assembly lipoprotein YfiO [Alicycliphilus
           denitrificans K601]
          Length = 265

 Score =  250 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 10/224 (4%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
            +  T      ++Y +A   L    + KA     +         +A+++ L  A+ QY  
Sbjct: 25  PEDKTAGWSTDKIYAEARDELNGGAYDKAVPLLEKLEGRAAGTPLAQQAQLEKAYAQYKG 84

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ----------MIRDVPYDQRATKL 157
           G+  QA +  + ++  +P S  +DY  YL G+                     DQ+A K 
Sbjct: 85  GEKAQAIATLDRFMKLHPASPALDYALYLKGLVNFNENLGLFSWLSRQDLSERDQKAAKD 144

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
             +    +V R+  S Y   AR  +T   N LA  EV + RYY +RG YVAAI R Q  +
Sbjct: 145 SFESFRELVTRFPESRYTPDARLRMTYIVNSLAQYEVHVARYYYQRGAYVAAISRAQSAI 204

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            +Y D    EEA+  LV +Y AL +     +   ++Q  YP   
Sbjct: 205 TDYKDVPATEEALYILVRSYDALGMTQLRDDAQRVLQASYPNSS 248


>gi|126438751|ref|YP_001059204.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           668]
 gi|126218244|gb|ABN81750.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
           668]
          Length = 274

 Score =  250 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 14/236 (5%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G      +       T      ++Y +A   L   ++ K  +YF       PF   A+++
Sbjct: 27  GCHGLPQKSDE----TATWSNNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQA 82

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------R 146
            +  A+  +   +   A    + +I  +P+  +V Y YYL GM +               
Sbjct: 83  QINVAYCNWKDNETAAADQAVDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQD 142

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
               D +A +        +V+RY  S Y   A   +    N LA+ EV    YY +RG Y
Sbjct: 143 MSERDPQALRESYDAFKAVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAY 202

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           VAAI R QL +  Y +A   E+A+  ++ +Y  L     A +   ++   +P   +
Sbjct: 203 VAAINRAQLAIKEYKNAPAIEDALHIMMLSYAKLNQPQLADDTKRVLASTFPDSPY 258



 Score = 45.1 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 22/111 (19%)

Query: 80  FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125
           F      +P +  A  +               + +A   Y  G Y  A +  +  I +Y 
Sbjct: 158 FKAVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYK 217

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            +  ++   +++ +SYA++ +         +L       +   + +SPYV 
Sbjct: 218 NAPAIEDALHIMMLSYAKLNQ--------PQLADDTKRVLASTFPDSPYVT 260


>gi|312796111|ref|YP_004029033.1| lipoprotein, ComL family [Burkholderia rhizoxinica HKI 454]
 gi|312167886|emb|CBW74889.1| Lipoprotein, ComL family [Burkholderia rhizoxinica HKI 454]
          Length = 276

 Score =  249 bits (637), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 97/236 (41%), Gaps = 14/236 (5%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G      +       T     +++Y +A       ++ K  +YF       PF   A+++
Sbjct: 26  GCHGLPEKTDE----TAAWTNQKLYSEAQDAFTAGDWGKCSKYFELLQGRDPFGHFAQQA 81

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------R 146
            +  A+ Q+   +   A    + +I  +P+  ++ Y YYL G+                 
Sbjct: 82  QINVAYCQWKDNETAAAEQAVDRFIQLHPDHPDIAYAYYLKGLISFNDDLGLFGRFAGQD 141

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
               D +A +        +VE+Y +S Y   A   +    N LA+ EV    YY +RG Y
Sbjct: 142 MSERDPKALRDSYDAFRVVVEKYPSSKYAPDAAQRMRYIVNALASHEVHTADYYYRRGAY 201

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           VAAI R QLVL  Y +A   E+A+  ++ +Y AL     A +   ++   +P   +
Sbjct: 202 VAAINRAQLVLKEYKNAPATEDALHVMILSYRALNQPQLADDTQRVLTSTFPDSPY 257



 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 35/111 (31%), Gaps = 22/111 (19%)

Query: 80  FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125
           F      +P +  A  +               + +A   Y  G Y  A +  +  + +Y 
Sbjct: 157 FRVVVEKYPSSKYAPDAAQRMRYIVNALASHEVHTADYYYRRGAYVAAINRAQLVLKEYK 216

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            +   +   +++ +SY              +L       +   + +SPYV 
Sbjct: 217 NAPATEDALHVMILSY--------RALNQPQLADDTQRVLTSTFPDSPYVT 259


>gi|157964248|ref|YP_001499072.1| DNA uptake lipoprotein [Rickettsia massiliae MTU5]
 gi|157844024|gb|ABV84525.1| DNA uptake lipoprotein [Rickettsia massiliae MTU5]
          Length = 251

 Score =  249 bits (637), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 69/242 (28%), Positives = 125/242 (51%), Gaps = 6/242 (2%)

Query: 30  IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
           +    L G   + + D  +  +        +Y + +  L+++ + KA E F +     P 
Sbjct: 12  VIGLVLGGCTNKKNSDDIVVPMP------TLYNEGITLLEKKKYKKAAEEFGRVFYQHPG 65

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
             +  ++ LM A+  + A +Y++A  + + +I  +P + ++ Y YYL  +SY  +I DV 
Sbjct: 66  NEMTPQAELMQAYSLFLAAQYEEAVDVLDMFINLHPANVDIAYAYYLKALSYYMLISDVN 125

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
           +DQ  T L       ++ ++ N+ Y   +   + +  + LA KE+ +GR+YLK+   +AA
Sbjct: 126 HDQSRTFLAKDSFEDVIAKFPNTKYAIDSSLKIDLVNDHLAGKEMMVGRFYLKKKNPMAA 185

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
           I RF+ V+ NY    H+ EA+ RL E+Y+ L L DEA++  S++   YP   W  Y   L
Sbjct: 186 INRFEEVIDNYQTTSHSVEALYRLAESYMMLGLPDEAKKYASVLGYNYPDSQWYSYAYRL 245

Query: 270 VK 271
           V+
Sbjct: 246 VQ 247


>gi|221067307|ref|ZP_03543412.1| outer membrane assembly lipoprotein YfiO [Comamonas testosteroni
           KF-1]
 gi|220712330|gb|EED67698.1| outer membrane assembly lipoprotein YfiO [Comamonas testosteroni
           KF-1]
          Length = 271

 Score =  249 bits (637), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 64/250 (25%), Positives = 104/250 (41%), Gaps = 17/250 (6%)

Query: 19  LYKFALTIFFS-IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           + + +LT+  + +    L G           D  T       +Y +A        + KA 
Sbjct: 9   MPRISLTLVPAVLIAATLAGCSSTK------DDPTAKWTPERIYTEARDESSSGAYDKAV 62

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
             F +         +A+++ L  A+ QY AG+  QA +  + +   +P S  +DY  YL 
Sbjct: 63  PLFEKLEGRAAGTPLAQQAQLEKAYAQYKAGEKVQALATLDRFTKLHPASPAMDYALYLK 122

Query: 138 GMSYAQ----------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           G+                     DQ+A K   +    +V R+ +S Y   AR  +    N
Sbjct: 123 GLVNFNDNLGMFGWLTRQDLSERDQKAAKDSFESFRELVTRFPDSKYSDDARQRMQYIVN 182

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
            LA  EV + RYY  RG YVAAI R Q  + +Y +     EAM  LV++Y AL +     
Sbjct: 183 SLAQYEVHVARYYYSRGAYVAAIARAQTAIKDYQNVPSVREAMVILVKSYDALGMTQLRD 242

Query: 248 EVVSLIQERY 257
           +   ++++ Y
Sbjct: 243 DAKRVLEQSY 252


>gi|237748963|ref|ZP_04579443.1| competence lipoprotein ComL [Oxalobacter formigenes OXCC13]
 gi|229380325|gb|EEO30416.1| competence lipoprotein ComL [Oxalobacter formigenes OXCC13]
          Length = 266

 Score =  249 bits (637), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 61/253 (24%), Positives = 106/253 (41%), Gaps = 14/253 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K+   +   I    +        +       T      ++Y +A   L   N+ KA E
Sbjct: 1   MRKYLTILLACIIALSISACGLLPEKIDE----TASWPAGKLYREAKEELNSGNYEKAVE 56

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
           YF +    +PF   A+++ +  A+  Y   +  QA +  E +I  +P   N+DY+YYL G
Sbjct: 57  YFEKLEARYPFGIYAQQAQMDIAYAYYRQNEQAQALAAAERFIKLHPNHPNIDYMYYLKG 116

Query: 139 MSYAQ----------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +                     D +A +        +V RY +S Y K A   +      
Sbjct: 117 LINFNDRLGLLNFAFRQDLSERDPKAAQDAFDAFKVLVTRYPDSVYAKDAMLRMKYLVTM 176

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E+ + +YY +RG Y+AA  R Q  + NY ++   EEA+  + ++Y  L L D + +
Sbjct: 177 LAKYEIHVAKYYYRRGAYLAAANRAQRTIKNYPESHVVEEALYIMAQSYKKLGLYDLSAD 236

Query: 249 VVSLIQERYPQGY 261
              + ++ YP   
Sbjct: 237 AERVFKQNYPDSK 249


>gi|307729590|ref|YP_003906814.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp.
           CCGE1003]
 gi|307584125|gb|ADN57523.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp.
           CCGE1003]
          Length = 286

 Score =  249 bits (637), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 10/221 (4%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           T      ++Y +A   L   ++ K  +YF       PF   A+++ +  A+  +   +  
Sbjct: 50  TATWNNNKLYTEANDALNGGDYGKCAKYFEMLEGRDPFGHFAQQAQINVAYCNWKDNETA 109

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPYDQRATKLMLQY 161
            A    + +I  +P+  ++ Y YYL GM +                   D ++ +     
Sbjct: 110 AADQAIDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPKSLRESYDA 169

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
              +V+RY NS Y   A   +    N LA+ EV    YY +RG YVAAI R QL L  Y 
Sbjct: 170 FKVVVDRYPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLALKEYK 229

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           +A   E+A+  ++ +Y  L     A +   ++   +P   +
Sbjct: 230 NAPAIEDALHIMMLSYEKLNQPQLADDTKRVLAGTFPDSPY 270



 Score = 40.9 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 39/111 (35%), Gaps = 22/111 (19%)

Query: 80  FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125
           F      +P +  A  +               + +A   Y  G Y  A +  +  + +Y 
Sbjct: 170 FKVVVDRYPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLALKEYK 229

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            +  ++   +++ +SY ++ +         +L       +   + +SPYV 
Sbjct: 230 NAPAIEDALHIMMLSYEKLNQ--------PQLADDTKRVLAGTFPDSPYVT 272


>gi|83648562|ref|YP_436997.1| DNA uptake lipoprotein [Hahella chejuensis KCTC 2396]
 gi|83636605|gb|ABC32572.1| DNA uptake lipoprotein [Hahella chejuensis KCTC 2396]
          Length = 275

 Score =  249 bits (637), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 66/245 (26%), Positives = 107/245 (43%), Gaps = 19/245 (7%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            +F  +A   L              +   V  ++E Y+KA   L   NF +A  +     
Sbjct: 6   ALFAMLAFVLLTACAS---------APPQVLSEKEYYDKAKSALDSGNFLEAARHLEDLE 56

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
              PF   A ++ L   +  Y++   ++A S  E +I  +PES +VDY YY+ G++    
Sbjct: 57  TYHPFGRYAEQAQLDLIYAHYNSLNPERAESAAERFIRLHPESPHVDYAYYIKGLAAYYA 116

Query: 145 ----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
                     I     D    K   +  S +V  + +SPY   A   +   + +LA  E+
Sbjct: 117 DLGLGPRFLPIDVNSRDPGRAKEAFRDFSTLVTNFPDSPYAADAEKRMLAIKERLAQYEM 176

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
            + RYY++R  YVAA+ R Q V+ NY D     EA++ +VE Y  L +   A + + L+ 
Sbjct: 177 HVARYYIRRQAYVAAVARAQYVVENYPDTPVVPEALSLMVELYRYLGMQRHADDALVLLA 236

Query: 255 ERYPQ 259
             YP 
Sbjct: 237 ASYPD 241


>gi|255743835|ref|ZP_05417791.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio cholera CIRS
           101]
 gi|262156054|ref|ZP_06029173.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio cholerae INDRE
           91/1]
 gi|262191806|ref|ZP_06049977.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio cholerae CT
           5369-93]
 gi|18203202|sp|Q9KU21|Y708_VIBCH RecName: Full=UPF0169 lipoprotein VC_0708; Flags: Precursor
 gi|255738466|gb|EET93855.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio cholera CIRS
           101]
 gi|262030090|gb|EEY48735.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio cholerae INDRE
           91/1]
 gi|262032293|gb|EEY50860.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio cholerae CT
           5369-93]
 gi|327483505|gb|AEA77912.1| Probable component of the lipoprotein assembly complex (forms a
           complex with YaeT, YfgL, and NlpB) [Vibrio cholerae
           LMA3894-4]
          Length = 241

 Score =  249 bits (637), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 53/228 (23%), Positives = 93/228 (40%), Gaps = 15/228 (6%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              SS DV  D         ++Y +A   L+   +  A E        +PF   + +  L
Sbjct: 17  GCSSSPDVVPDVPP-----SQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQVQL 71

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV---------- 148
              +  Y         +  E +    P  + +D+V Y+ G+++    R+           
Sbjct: 72  DLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRR 131

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
             D    K       ++++RY NSPY + A+  +   +N+LA  ++    +YL+R  ++A
Sbjct: 132 DRDPEPVKAAFADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLRREAWIA 191

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           AI R Q +   Y D E A +++   +EAY  L L D       L+Q  
Sbjct: 192 AINRTQELQKTYPDTEAARKSLEIQLEAYQQLGLTDAIERTKQLMQLN 239


>gi|56460292|ref|YP_155573.1| competence lipoprotein ComL [Idiomarina loihiensis L2TR]
 gi|56179302|gb|AAV82024.1| Competence lipoprotein ComL [Idiomarina loihiensis L2TR]
          Length = 256

 Score =  249 bits (637), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 56/247 (22%), Positives = 112/247 (45%), Gaps = 15/247 (6%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            +F S+    L G   QS  +    +  +      +Y++A   +   N + A E  +  +
Sbjct: 10  LVFSSVLGLMLAGCSSQSDEEQVSKTQIEY-----LYDQAQESMANGNLNLAQEQLSSLN 64

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
           + +PF   A +  L   ++ Y      +A +  + +I+  P  K+VDY  Y+ G+   + 
Sbjct: 65  KRYPFGPFAHQIQLDLIYLHYKLDNTDEALAAIDRFISLNPNHKDVDYALYMRGLVNQRA 124

Query: 145 ----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
                     +     D    +   +  + +V +Y  S Y   A+  +   +++LA KE+
Sbjct: 125 EHNAIHNLAGVDRSDRDSSMAQAAFKDFAELVRKYPKSEYAADAKKRLIALKSRLAKKEL 184

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
            I +YY++R  Y+AA  R + VL ++SD    E A+A +VE+Y  L L +   + + +++
Sbjct: 185 AIAQYYMERQAYLAAANRGRYVLEHFSDTPEVENALAIMVESYDQLELPELREDAMKVLR 244

Query: 255 ERYPQGY 261
             +P+  
Sbjct: 245 ANFPENQ 251


>gi|54310132|ref|YP_131152.1| hypothetical protein PBPRA3022 [Photobacterium profundum SS9]
 gi|46914571|emb|CAG21350.1| conserved hypothetical protein [Photobacterium profundum SS9]
          Length = 242

 Score =  249 bits (637), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 53/243 (21%), Positives = 96/243 (39%), Gaps = 17/243 (6%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           LTI   +AV  L G    S+ +V  D         E+Y  A   L+  +++ A E     
Sbjct: 4   LTITTLLAVAILSGCS--STEEVVPDVPP-----AELYVTAQQALQSGSWTTAIERLETL 56

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +PF   + +  L   +  Y         +    +    P  +  D+V Y+ G++   
Sbjct: 57  DSRYPFGAYSEQVQLDLIYAYYKNDDLALGEATIARFNRLNPAHEKSDWVLYMRGLTQMA 116

Query: 144 MIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
             R              D    +   +   R+++RY NS Y   A+  +   +N+LA  +
Sbjct: 117 QDRSFMHDIFSIDRHDRDPEPARKAFRDFKRLLDRYPNSQYAADAKARMIFIKNRLADYD 176

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +    +Y++R  ++AAI R Q +   Y D + A +++  ++ AY  L L +       LI
Sbjct: 177 LATVDFYIRREAWIAAINRSQQIQKLYPDTQAARKSLPLMLTAYEKLGLQEPIENTKKLI 236

Query: 254 QER 256
              
Sbjct: 237 ALN 239


>gi|241763388|ref|ZP_04761443.1| outer membrane assembly lipoprotein YfiO [Acidovorax delafieldii
           2AN]
 gi|241367430|gb|EER61741.1| outer membrane assembly lipoprotein YfiO [Acidovorax delafieldii
           2AN]
          Length = 265

 Score =  249 bits (637), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 68/227 (29%), Positives = 104/227 (45%), Gaps = 10/227 (4%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
            +  T       +Y +A   L    F KA     +         +A+++ L  A+ QY  
Sbjct: 25  PEDKTAGWSPNRIYSEAKDELGSGAFDKAVPLLEKLEGRAAGTPLAQQAQLDKAYAQYKG 84

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ----------MIRDVPYDQRATKL 157
           G+  QA +  + +I  +P S  +DY  YL G+                     DQ+A K 
Sbjct: 85  GEKAQAIATLDRFIKLHPASPALDYALYLKGLVNFNDNLGLFSWVSQQDLSERDQKAAKD 144

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
             + +S +V R+ +S Y K AR  +T   N LA  EV + RYY +RG YVAAI R Q  L
Sbjct: 145 SFESLSELVTRFPDSRYAKDARQRMTYIVNSLAQYEVHVARYYYERGAYVAAIGRAQSAL 204

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
           A+Y      EEA+  L+++Y AL +     +   +++  YPQG  A+
Sbjct: 205 ADYQGVPALEEALYILMQSYDALGMTQLRDDTRRVMEASYPQGALAK 251


>gi|331004933|ref|ZP_08328346.1| putative component of the lipoprotein assembly complex [gamma
           proteobacterium IMCC1989]
 gi|330421257|gb|EGG95510.1| putative component of the lipoprotein assembly complex [gamma
           proteobacterium IMCC1989]
          Length = 306

 Score =  249 bits (636), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 59/249 (23%), Positives = 111/249 (44%), Gaps = 16/249 (6%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           K  L     +   F+ G            S+T+   + E+YE+    LK  NF  A +Y 
Sbjct: 13  KRHLFFILVVLSVFIGGCTANQ------LSLTNFGTEAELYEQVQKDLKRDNFLDAIKYL 66

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM- 139
               + FPF   ++ + L   +  Y   + + A +    +I  +P+ +NVDY YY+ G+ 
Sbjct: 67  QLMEKKFPFGEYSKSAQLSLIYAHYGFDQKESATASANRFIRLHPQHRNVDYAYYMKGLI 126

Query: 140 ------SYAQMIRDVP---YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
                 ++ Q   +V     D  A +    + S +V+ +  S Y   A   +T   N LA
Sbjct: 127 SFPDAKTFLQQFFNVDLSKRDISAARSSFNHFSTLVKLFPESEYAPDALKRMTFLHNLLA 186

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
             E+ +  YYL+R  ++AA  R + V+ N+ +     +A+A +++ Y  + + D A   +
Sbjct: 187 RHEIHVANYYLERKAFLAAANRGRYVVENFQETSAIPDALAVMIQGYHEMKMHDLAENSL 246

Query: 251 SLIQERYPQ 259
            +++  +P 
Sbjct: 247 EVLRTNFPN 255


>gi|291614497|ref|YP_003524654.1| outer membrane assembly lipoprotein YfiO [Sideroxydans
           lithotrophicus ES-1]
 gi|291584609|gb|ADE12267.1| outer membrane assembly lipoprotein YfiO [Sideroxydans
           lithotrophicus ES-1]
          Length = 264

 Score =  249 bits (636), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 58/247 (23%), Positives = 105/247 (42%), Gaps = 20/247 (8%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           + +L +F  +    LV      S++             E+Y KA   ++++N+ KA + F
Sbjct: 2   RHSLAVFLLL---TLVACSSDPSKEGQN------LTADELYAKAQASMQDENYEKAVKQF 52

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
                 +P+   A+++ +  A+  Y   +   A +  + +   YP S ++DYV YL G+ 
Sbjct: 53  ETLQSRYPYGRYAQQAQMEIAYAYYKHSEPAPAIAALDHFAKMYPMSTHLDYVLYLKGLI 112

Query: 141 YAQ-----------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
                                D  A +        +V R+ +S Y   A+  +    N L
Sbjct: 113 NFNENINSLFGTMFKQDPSERDPSALRESFNSFKELVTRFPDSKYAPDAKLRMQYLLNSL 172

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           A+ E+ I  YYL+RG YVAA  R + VL ++ +     EA+  LV+AY A+ +     + 
Sbjct: 173 ASSEIHIASYYLRRGAYVAAANRAKSVLIDFPNTPQTREALQILVQAYDAMGMEVLRDDT 232

Query: 250 VSLIQER 256
             ++   
Sbjct: 233 QRVLSLN 239


>gi|254426918|ref|ZP_05040625.1| outer membrane assembly lipoprotein YfiO [Alcanivorax sp. DG881]
 gi|196193087|gb|EDX88046.1| outer membrane assembly lipoprotein YfiO [Alcanivorax sp. DG881]
          Length = 272

 Score =  249 bits (636), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 59/247 (23%), Positives = 101/247 (40%), Gaps = 17/247 (6%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
            + V  L G          L            Y +A   ++ +N+  A +   +    FP
Sbjct: 8   LLCVLILAGCAGNPEDRPELTEADQ-------YREASESIESKNYLTAIDQLKELEARFP 60

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM---- 144
           +   A +S L   + QY +  Y       + ++  YP    +DY  Y+ G++   M    
Sbjct: 61  YGDYAEQSALDLIYAQYKSVDYPATVVAAQRFMRNYPAHPRMDYALYMRGLANFNMEKGL 120

Query: 145 ------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
                       D  A K   +   R+V R+ +S Y   AR  +   RNQLA +E+ + R
Sbjct: 121 FDNMVTSDRSSKDMDAAKDAFRDFERLVARFPDSEYSPDARARMVHIRNQLARQELHVAR 180

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           YY +RG  VA+I R Q V+ +Y      EE +A + + Y  L L ++A +  +++   +P
Sbjct: 181 YYARRGAIVASINRAQYVVKHYQQTPAVEEGLAIMTKGYQRLELPEQAEKSRAVLALNWP 240

Query: 259 QGYWARY 265
              +   
Sbjct: 241 DSAFLDD 247


>gi|326316816|ref|YP_004234488.1| outer membrane assembly lipoprotein YfiO [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323373652|gb|ADX45921.1| outer membrane assembly lipoprotein YfiO [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 265

 Score =  249 bits (636), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 66/241 (27%), Positives = 105/241 (43%), Gaps = 16/241 (6%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
            L G    +         T       +Y +A   L   ++ KA   F +         +A
Sbjct: 17  VLAGCSSTTEDK------TAGWSPNRIYSEARDELNSNSYDKAVPLFEKLEGRAAGTPLA 70

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ---------- 143
           +++ L  A+ QY  G+  QA +  + ++  +P S   DY  YL G+              
Sbjct: 71  QQAQLEKAYAQYKGGEKAQAIATLDRFMKLHPASPAYDYALYLKGLVNFNDNLGLFSWLS 130

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
                  DQ+A K   +    +V R+ +S Y + A+  +T   N LA  EV + RYY +R
Sbjct: 131 RQDLSERDQKAAKDSFESFRELVTRFPDSRYARDAQQRMTYIVNSLAQYEVHVARYYYQR 190

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
           G YVAAI R Q+ LA+Y D    EEA+  L+++Y AL +     +   ++   YPQ  + 
Sbjct: 191 GAYVAAINRAQIALADYKDVPALEEALYILIKSYDALGMTQLRDDAQRVMAASYPQSEYM 250

Query: 264 R 264
           R
Sbjct: 251 R 251


>gi|90580376|ref|ZP_01236183.1| hypothetical protein VAS14_20631 [Vibrio angustum S14]
 gi|90438678|gb|EAS63862.1| hypothetical protein VAS14_20631 [Vibrio angustum S14]
          Length = 242

 Score =  249 bits (636), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 55/243 (22%), Positives = 101/243 (41%), Gaps = 17/243 (6%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           LTI   +AV  L G    SS++  +  V        +Y  A   L++ N++ A E     
Sbjct: 4   LTITTLLAVALLSGC---SSKEEVIPDVP----PSNLYATAQTALQKGNWTSAIEQLEAL 56

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +PF   + +  L   +  Y +       +  E ++   P++   D+V Y+ G+++  
Sbjct: 57  DSRYPFGAYSDQVQLDLIYAYYKSDDLALGEATIERFLRLNPDNPQADWVVYMRGLTHMA 116

Query: 144 MIRD----------VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
             R              D   ++   +    ++ERY  S Y   A+  +   +N+LA  +
Sbjct: 117 QDRSFMHDMFNINRFDRDPTPSRQAFKDFKYLLERYPESEYGADAKARMIFLKNRLANYD 176

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +    +Y++R  ++AAI R Q +   Y D E A +++A    AY  L L  E      L+
Sbjct: 177 LSTADFYIRREAWIAAINRCQQIQRLYPDTEAARQSLALEKTAYEKLNLQKEVERTDKLM 236

Query: 254 QER 256
           +  
Sbjct: 237 KLN 239


>gi|253689513|ref|YP_003018703.1| outer membrane assembly lipoprotein YfiO [Pectobacterium
           carotovorum subsp. carotovorum PC1]
 gi|251756091|gb|ACT14167.1| outer membrane assembly lipoprotein YfiO [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 244

 Score =  248 bits (635), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 54/230 (23%), Positives = 97/230 (42%), Gaps = 16/230 (6%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G     S+D   DS        E+Y  A   L++ NF  A          +PF   +++ 
Sbjct: 19  GCSSN-SKDAVPDSPP-----SEIYANAQQKLQDGNFKAAITQLEALDNRYPFGPYSQQV 72

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV-------- 148
            L   +  Y + +   A +  + ++   P   NVDYV Y+ G++   +            
Sbjct: 73  QLDLIYAYYKSAELPLAQASIDRFLRLNPTHPNVDYVLYMRGLTDMALDDSALQGFFGVD 132

Query: 149 --PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
               D +  +   +  S++++ Y NS Y   A   +   + +LA  E+ + +YY KR  Y
Sbjct: 133 RSDRDPQYARTAFRDFSKLIQGYPNSQYATDANKRLVYLKERLAKYELSVAQYYTKRSAY 192

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           VA + R + +L +Y D +  + A+  +  AY  L L  +A +V  +I   
Sbjct: 193 VAVVNRVEQMLRDYPDTQATKTALPLMENAYRELQLAAQADKVAKVIAAN 242


>gi|90414901|ref|ZP_01222866.1| hypothetical protein P3TCK_25174 [Photobacterium profundum 3TCK]
 gi|90324015|gb|EAS40609.1| hypothetical protein P3TCK_25174 [Photobacterium profundum 3TCK]
          Length = 242

 Score =  248 bits (635), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 53/243 (21%), Positives = 96/243 (39%), Gaps = 17/243 (6%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           LTI   +AV  L G    S+ +V  D         E+Y  A   L+  +++ A E     
Sbjct: 4   LTITTLLAVAILSGCS--STEEVVPDIPP-----AELYVTAQQALQSGSWTTAIERLETL 56

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +PF   + +  L   +  Y         +    +    P  +  D+V Y+ G++   
Sbjct: 57  DSRYPFGAYSEQVQLDLIYAYYKNDDLALGEATIARFNRLNPAHEKSDWVLYMRGLTQMA 116

Query: 144 MIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
             R              D    +   +   R+++RY NS Y   A+  +   +N+LA  +
Sbjct: 117 QDRSFMHDIFSIDRHDRDPEPARKAFRDFKRLLDRYPNSQYAADAKARMIFIKNRLADYD 176

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +    +Y++R  ++AAI R Q +   Y D + A +++  ++ AY  L L +       LI
Sbjct: 177 LATVDFYIRREAWIAAINRSQQIQRLYPDTQAARKSLPLMLTAYEKLGLQEPIENTKKLI 236

Query: 254 QER 256
              
Sbjct: 237 ALN 239


>gi|256822305|ref|YP_003146268.1| outer membrane assembly lipoprotein YfiO [Kangiella koreensis DSM
           16069]
 gi|256795844|gb|ACV26500.1| outer membrane assembly lipoprotein YfiO [Kangiella koreensis DSM
           16069]
          Length = 268

 Score =  248 bits (635), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 52/260 (20%), Positives = 106/260 (40%), Gaps = 11/260 (4%)

Query: 10  CIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLK 69
              +     + K ++ +   +   F  G            +  +    +E+++ A   ++
Sbjct: 4   AEHKQKELNMQKHSIIVLALLVFSF-AGCSSTPKEPDLNKTKVESMAAQELFDGAKRSMR 62

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
             N+ +A E   +    +PF  ++ ++ L   +  +    Y+   +L + ++ Q+P+ +N
Sbjct: 63  NGNYVRATELLEEIDTRYPFGRISEQAKLELIYAYFKRADYESGQALADRFLRQHPQHEN 122

Query: 130 VDYVYYLVGMSYAQMIRDVP----------YDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            DYVYY+ G+ + +                 D    K        +VE Y  S Y   AR
Sbjct: 123 ADYVYYMKGVMHYEQEVGTFKEVFSADIEKRDTSNIKAAFDNFKALVEVYPESEYAPDAR 182

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             +   RN LA  E+ + RYY++R  Y+ A  R + ++ N+        A+  L+ +Y  
Sbjct: 183 KRMIQIRNLLADYELHVARYYMQRDSYIGAANRAKYIVENFPKTPAVPSALEILINSYKI 242

Query: 240 LALMDEAREVVSLIQERYPQ 259
           L L + + E   ++   YP 
Sbjct: 243 LELPEISEEYRKVLLLNYPD 262


>gi|119946872|ref|YP_944552.1| putative lipoprotein [Psychromonas ingrahamii 37]
 gi|119865476|gb|ABM04953.1| putative lipoprotein [Psychromonas ingrahamii 37]
          Length = 257

 Score =  248 bits (635), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 58/253 (22%), Positives = 114/253 (45%), Gaps = 15/253 (5%)

Query: 19  LYKFALTIFFSIAVCFLV-GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           + K    I  S+ +  L  G   + +    +D     +    +YE+A   L+  +F KA 
Sbjct: 1   MKKILRLITSSLMIVLLSTGCSSKKAEKPKVDD----KPPMVLYEQAKQALESASFEKAS 56

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           +        +PF   + +  L   +  Y  G+     +  + ++   P   ++DY+YY+ 
Sbjct: 57  DILEALDTRYPFGPHSDQVQLDLIYAYYKRGETAFTLANIDRFLRLNPTHPDLDYIYYMR 116

Query: 138 GMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           G++Y             I     D        + +SRI++ Y +S Y   A+  +   ++
Sbjct: 117 GLTYISADQQFFQDLFGIDRYNRDPNNAIQAFKDLSRIIKYYPSSEYAVDAQQRIIDLKD 176

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
           +LA  E+ I ++YLKR  Y+AAI R ++VL NY D    E+A+  ++ +Y  L + +   
Sbjct: 177 RLARYEIGIAQWYLKREAYIAAINRCKIVLNNYPDMPAVEQALEIMIASYNVLGIEEPKM 236

Query: 248 EVVSLIQERYPQG 260
             +++++  YP+ 
Sbjct: 237 NALAVLKLNYPKN 249


>gi|85711026|ref|ZP_01042086.1| Competence lipoprotein ComL [Idiomarina baltica OS145]
 gi|85694939|gb|EAQ32877.1| Competence lipoprotein ComL [Idiomarina baltica OS145]
          Length = 252

 Score =  248 bits (635), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 55/251 (21%), Positives = 109/251 (43%), Gaps = 14/251 (5%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           K  + I  +     L G      +   L           +YE A   +   NF++A E  
Sbjct: 2   KRRILILTAAVGLSLAGCSSTDDQQSELK----YTQVELMYESAQDQMSLGNFTQAEEEL 57

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
           +  +  +PF   A +  L   ++ Y     ++A +  + +I+  P  K+VDY  Y+ G++
Sbjct: 58  SNINSRYPFGPFAHQVQLDLIYLNYKLDNTEKALAAIDRFISLNPNHKDVDYALYMRGLT 117

Query: 141 YAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
             +           +     D    K   +  + ++ +Y  S Y   A+  +   +++LA
Sbjct: 118 NQRAEYNAIHELAGVDRSDRDSTMAKEAFKDFAELLRKYPESKYAADAKKRMIAIKSRLA 177

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
            KE+ + +YY+KR  Y+AA  R + V+ N+ +    E A+A +VE Y  L L +  ++ +
Sbjct: 178 KKELAVAQYYMKRQAYLAAANRGRYVVENFENTPEVESALAMMVECYDQLELEELKQDTL 237

Query: 251 SLIQERYPQGY 261
            +++  +P   
Sbjct: 238 KVLRSNFPNNE 248


>gi|209522217|ref|ZP_03270854.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp. H160]
 gi|209497346|gb|EDZ97564.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp. H160]
          Length = 286

 Score =  248 bits (635), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 10/221 (4%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           T      ++Y +A   L   ++ K  +YF       PF   A+++ +  A+  +   +  
Sbjct: 50  TATWNNNKLYTEANDALTGGDWGKCAKYFELLEGRDPFGHFAQQAQINVAYCNWKDNENA 109

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPYDQRATKLMLQY 161
            A    + +I  +P+  ++ Y YYL GM +                   D ++ +     
Sbjct: 110 AADQAIDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPKSLRESYDA 169

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
              +V+R+ NS Y   A   +    N LA+ EV    YY +RG YVAAI R QL L +Y 
Sbjct: 170 FKVVVDRFPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLALRDYK 229

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           +A   E+A+  ++ +Y  L     A +   ++   +P   +
Sbjct: 230 NAPAIEDALHIMILSYEKLNNQQLADDTRRVLAGTFPDSPY 270



 Score = 42.8 bits (100), Expect = 0.056,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 37/111 (33%), Gaps = 22/111 (19%)

Query: 80  FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125
           F      FP +  A  +               + +A   Y  G Y  A +  +  +  Y 
Sbjct: 170 FKVVVDRFPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLALRDYK 229

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            +  ++   +++ +SY ++           +L       +   + +SPYV 
Sbjct: 230 NAPAIEDALHIMILSYEKLNNQ--------QLADDTRRVLAGTFPDSPYVT 272


>gi|262401595|ref|ZP_06078161.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio sp. RC586]
 gi|262352012|gb|EEZ01142.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio sp. RC586]
          Length = 240

 Score =  248 bits (634), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 48/218 (22%), Positives = 90/218 (41%), Gaps = 10/218 (4%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             V       E+Y +A   L+  ++  A E        +PF   + +  L   +  Y   
Sbjct: 22  PEVVPDVPPSELYSEAQTALQSGSWLTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKND 81

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLM 158
                 +  E +    P  + +D+V Y+ G+++    R+             D    K  
Sbjct: 82  DLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNVDRSDRDPEPVKSA 141

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
                ++++RY NSPY + A+  +   +N+LA  ++    +YL+R  ++AAI R Q +  
Sbjct: 142 FADFKKLLQRYPNSPYAEDAQRRMYALKNRLAEYDLATADFYLRREAWIAAINRTQELQK 201

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            Y D E A +A+   +EAY  L + +       L++  
Sbjct: 202 TYPDTEAARKALDIQLEAYQQLGMTEAVERTKQLMKLN 239


>gi|239948179|ref|ZP_04699932.1| DNA uptake lipoprotein [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239922455|gb|EER22479.1| DNA uptake lipoprotein [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 249

 Score =  248 bits (634), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 74/242 (30%), Positives = 129/242 (53%), Gaps = 7/242 (2%)

Query: 30  IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
           I + F     +++S D+ +   T       +Y + V  L+++ + KA E F +     P 
Sbjct: 13  IGLVFSGCKSKKNSDDIVVPIPT-------LYNEGVTLLEKKKYKKAAEEFGRVFYQHPG 65

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
             +  ++ LM A+  + A +Y++A  + + +I  +P + ++ Y YYL  +SY  +I DV 
Sbjct: 66  NEMTPQAELMQAYSLFLAAQYEEAVDVLDMFINLHPANVDITYAYYLKALSYYMLISDVN 125

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
           +DQ  T L       ++ ++ N+ Y   +   + +  + LA KE+ +GR+YLK+   +AA
Sbjct: 126 HDQSRTFLAKDSFEDVIAKFPNTKYAIDSSLKIDLVNDHLAGKEMMVGRFYLKKKNPMAA 185

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
           I RF+ V+ NY    H+ EA+ RLVE+Y+ L L DEA++  S++   YP   W  Y   L
Sbjct: 186 INRFEEVIDNYQTTSHSVEALYRLVESYMMLGLPDEAKKYASVLGYNYPDSQWYSYAYRL 245

Query: 270 VK 271
           VK
Sbjct: 246 VK 247


>gi|302879314|ref|YP_003847878.1| outer membrane assembly lipoprotein YfiO [Gallionella
           capsiferriformans ES-2]
 gi|302582103|gb|ADL56114.1| outer membrane assembly lipoprotein YfiO [Gallionella
           capsiferriformans ES-2]
          Length = 264

 Score =  248 bits (634), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 52/246 (21%), Positives = 107/246 (43%), Gaps = 12/246 (4%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           + +L +F  + +          + D      +      E+Y +A   L + +++ A + +
Sbjct: 2   RHSLAVFLLLTLTACGILSPLPTGDT--ADTSKSLSAEELYRQAKTELDDGSYNTAIKLY 59

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
                 +P+   A++S+L  A+  Y   +   A +  + +I Q+P + +VDY YY+ G++
Sbjct: 60  ETLQSRYPYGKYAQQSMLEMAYAYYRQSEPDPAIATADRFIKQFPNNAHVDYAYYVKGLA 119

Query: 141 YAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
                               D +A          +V R+ NS Y   A+  +    N L+
Sbjct: 120 TFNGELSLLSSVAGQDPSERDPQAALESFNAFKALVVRFPNSKYTPDAKLRLQYLVNALS 179

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
             E+ + +YYL+RG Y+AA+ R Q ++  Y ++    EA+  +++AY AL ++    +  
Sbjct: 180 RHEIHVAQYYLRRGAYIAAVNRAQDIIKQYPNSPSTREALQIMIDAYDALGMVQLRDDTK 239

Query: 251 SLIQER 256
            +    
Sbjct: 240 RVQASN 245



 Score = 35.5 bits (81), Expect = 8.9,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 27/64 (42%)

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
           G Y  AI  ++ + + Y   ++A+++M  +  AY   +  D A        +++P     
Sbjct: 50  GSYNTAIKLYETLQSRYPYGKYAQQSMLEMAYAYYRQSEPDPAIATADRFIKQFPNNAHV 109

Query: 264 RYVE 267
            Y  
Sbjct: 110 DYAY 113


>gi|330817149|ref|YP_004360854.1| Putative competence lipoprotein ComL [Burkholderia gladioli BSR3]
 gi|327369542|gb|AEA60898.1| Putative competence lipoprotein ComL [Burkholderia gladioli BSR3]
          Length = 281

 Score =  248 bits (634), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 14/236 (5%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G      +       T      ++Y +A   L   ++ K  +YF       PF   A+++
Sbjct: 33  GCHGLPQKTDE----TATWSNNKLYSEAQDALNGSDWGKCAKYFEALQGRDPFGHFAQQA 88

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------R 146
            +  A+  +   +   A    + +I  +P+  ++ Y YYL GM +               
Sbjct: 89  QINVAYCNWKDNEASAADQAVDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQD 148

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
               D +A +        +V+RY  S Y   A   +    N LA+ EV    YY +RG Y
Sbjct: 149 MSERDPQALRESYDAFKIVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAY 208

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           VAAI R QL +  Y +A   E+A+  +V +Y  L     A +   ++   +P   +
Sbjct: 209 VAAINRAQLAITQYKNAPAIEDALHIMVLSYGRLNQPQLADDTKRVLASTFPDSPY 264


>gi|258620373|ref|ZP_05715411.1| putative lipoprotein [Vibrio mimicus VM573]
 gi|258624746|ref|ZP_05719680.1| putative lipoprotein [Vibrio mimicus VM603]
 gi|262172217|ref|ZP_06039895.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio mimicus MB-451]
 gi|258583033|gb|EEW07848.1| putative lipoprotein [Vibrio mimicus VM603]
 gi|258587252|gb|EEW11963.1| putative lipoprotein [Vibrio mimicus VM573]
 gi|261893293|gb|EEY39279.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio mimicus MB-451]
          Length = 241

 Score =  248 bits (634), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 51/228 (22%), Positives = 93/228 (40%), Gaps = 15/228 (6%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              SS DV  D         E+Y +A   L+   +  A E        +PF   + +  L
Sbjct: 17  GCSSSPDVVPDVPP-----SELYSEAQSALQSGTWLTAIEKLEALDSRYPFGAYSEQVQL 71

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV---------- 148
              +  Y         +  E +    P  + +D+V Y+ G+++    R+           
Sbjct: 72  DLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNVDRS 131

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
             D    K       ++++RY NSPY + A+  +   +N+LA  ++    +YL+R  ++A
Sbjct: 132 DRDPEPVKSAFADFKKLLQRYPNSPYAEDAQRRMYALKNRLAEYDLATADFYLRREAWIA 191

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           AI R Q +   + D E A +A+   +EAY  L + +       L++  
Sbjct: 192 AINRTQELQKTFPDTEAARKALDIQLEAYQQLGMTEAVERTEQLMKLN 239


>gi|222111092|ref|YP_002553356.1| outer membrane assembly lipoprotein yfio [Acidovorax ebreus TPSY]
 gi|221730536|gb|ACM33356.1| outer membrane assembly lipoprotein YfiO [Acidovorax ebreus TPSY]
          Length = 265

 Score =  248 bits (633), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 63/224 (28%), Positives = 97/224 (43%), Gaps = 10/224 (4%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
            +  T      ++Y +A   L   ++ KA     +         +A+++ L  A+ QY  
Sbjct: 25  PEDKTAGWSTDKIYSEARDELNGGSYDKAVPLLEKLEGRAAGTPLAQQAQLEKAYAQYKG 84

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ----------MIRDVPYDQRATKL 157
           G+  QA +  + ++  +P S   DY  YL G+                     DQ+A K 
Sbjct: 85  GEKAQAIATLDRFMKLHPASPAYDYALYLKGLVNFNDNLGLFSWLSRQDLSERDQKAAKD 144

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
             +    +V R+  S Y   AR  +T   N LA  EV + RYY +RG YVAA+ R Q  +
Sbjct: 145 SFESFRELVTRFPESRYTPDARQRMTYIVNSLAQYEVHVARYYYERGAYVAAVSRAQSAV 204

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           A+Y D    EEA+  LV +Y AL L     +   ++   YPQ  
Sbjct: 205 ADYKDVPATEEALYILVRSYDALGLTQLRDDTRRVMDASYPQSS 248


>gi|209694253|ref|YP_002262181.1| outer membrane protein [Aliivibrio salmonicida LFI1238]
 gi|208008204|emb|CAQ78348.1| outer membrane protein [Aliivibrio salmonicida LFI1238]
          Length = 255

 Score =  247 bits (632), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 51/218 (23%), Positives = 92/218 (42%), Gaps = 10/218 (4%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D V       E+Y +A + L+  N++ A E        +PF   + +  L   +V Y   
Sbjct: 36  DDVIPDIPPSELYSQAQISLQAGNWTSAVERLEALDSRYPFGAYSEQVQLDLIYVYYKND 95

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLM 158
                 +  E +    P +   D+V Y+ G+++    R              D    +  
Sbjct: 96  DLALGLATIERFNRLNPTNPKADWVLYMRGLTHMAQDRSFMHDLFRVNRSDRDPEPARSA 155

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
            +   R++ERY +S Y + A+  +   +N+LA  E+    +YL+R  +++AI R Q +  
Sbjct: 156 FKDFKRLLERYPDSLYAEDAQTRMFALKNRLADYELATADFYLRREAWISAINRSQELQR 215

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            Y D E A +++  ++ AY  L L D  +    LI   
Sbjct: 216 TYPDTEAARKSLTIMLSAYKELKLDDAIQRTEELIALN 253


>gi|323526135|ref|YP_004228288.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp.
           CCGE1001]
 gi|323383137|gb|ADX55228.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp.
           CCGE1001]
          Length = 286

 Score =  247 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 10/221 (4%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           T      ++Y +A   L   +F K  +YF       PF   A+++ +  A+  +   +  
Sbjct: 50  TATWNNNKLYTEANDALNGGDFGKCAKYFEMLEGRDPFGHFAQQAQINVAYCNWKDNETA 109

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPYDQRATKLMLQY 161
            A    + +I  +P+  ++ Y YYL GM +                   D ++ +     
Sbjct: 110 AADQAIDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPKSLRESYDA 169

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
              +V++Y NS Y   A   +    N LA+ EV    YY +RG YVAAI R QL L  Y 
Sbjct: 170 FKVVVDKYPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLALKEYK 229

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           +A   E+A+  ++ +Y  L     A +   ++   +P   +
Sbjct: 230 NAPAIEDALHIMMLSYQKLNQPQLADDTKRVLAGTFPDSPY 270



 Score = 39.3 bits (91), Expect = 0.50,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 39/111 (35%), Gaps = 22/111 (19%)

Query: 80  FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125
           F      +P +  A  +               + +A   Y  G Y  A +  +  + +Y 
Sbjct: 170 FKVVVDKYPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLALKEYK 229

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            +  ++   +++ +SY ++ +         +L       +   + +SPYV 
Sbjct: 230 NAPAIEDALHIMMLSYQKLNQ--------PQLADDTKRVLAGTFPDSPYVT 272


>gi|289209196|ref|YP_003461262.1| outer membrane assembly lipoprotein YfiO [Thioalkalivibrio sp.
           K90mix]
 gi|288944827|gb|ADC72526.1| outer membrane assembly lipoprotein YfiO [Thioalkalivibrio sp.
           K90mix]
          Length = 279

 Score =  247 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 56/221 (25%), Positives = 99/221 (44%), Gaps = 10/221 (4%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           +  T      ++Y +A   L E N+ +A EY+ +    +PF   A+++ +   +  Y A 
Sbjct: 27  EDPTLGWSASQLYGEAKNALNEGNYDQAVEYYEKLEARYPFGRYAQQAQIEIPYAYYKAR 86

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLM 158
           + + A +  + +I   P   N+DY YYL G+      +              D    +  
Sbjct: 87  EPEAAIAAVDRFIQLNPRHPNLDYAYYLRGLINFNRQQGFLANLFPRDPAEMDPEPFEQA 146

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
            Q   R++  + +S Y + +   +   RN LAA E+ +  +Y++R  +VA   R + VLA
Sbjct: 147 FQDFDRLIREFPDSRYAQDSYLRMVYIRNALAAYELRVAEFYMERTAWVAGAERARHVLA 206

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            Y  AE   +A+  L  AY  L L D A   + +++  YP 
Sbjct: 207 TYPGAEVQPQALGVLWRAYTELGLEDYADATMQVLELNYPD 247


>gi|290476242|ref|YP_003469142.1| putative lipoprotein with tetratricopeptide repeats (TPR) domain
           [Xenorhabdus bovienii SS-2004]
 gi|289175575|emb|CBJ82378.1| putative lipoprotein with tetratricopeptide repeats (TPR) domain
           [Xenorhabdus bovienii SS-2004]
          Length = 244

 Score =  247 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 56/248 (22%), Positives = 103/248 (41%), Gaps = 17/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +     L G    +++D   D       Q ++Y      L+E N+  A +
Sbjct: 2   MIRMKYLVAAATLSMVLSGCS--NNKDAVPDIP-----QSQIYSAGQKHLQEGNYKGAIK 54

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   ++++ L   +  Y + ++  A +  + ++   P   N+DYV YL  
Sbjct: 55  QLESLDNRYPFGPYSQQTQLDLIYAYYKSAEFPMALASIDRFMRLNPTHPNIDYVIYLRA 114

Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +    +          I     D    +   +  + +V RY NS Y   A   +   + +
Sbjct: 115 LISQALDDNTLQSFFGIDRSDRDPEHARASFRDFNLLVSRYPNSQYTSDAAKRLVFLKER 174

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E+ + +YY KR  YVA + R + +L +Y D +   EA+  +  +Y  L LM EA +
Sbjct: 175 LAKYELAVVKYYTKRSAYVAVVSRVEQMLRDYPDTQATREALPYMEASYKELGLMAEADK 234

Query: 249 VVSLIQER 256
           V  LI   
Sbjct: 235 VAKLIAAN 242


>gi|238027089|ref|YP_002911320.1| putative competence lipoprotein ComL [Burkholderia glumae BGR1]
 gi|237876283|gb|ACR28616.1| Putative competence lipoprotein ComL [Burkholderia glumae BGR1]
          Length = 281

 Score =  247 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 54/236 (22%), Positives = 95/236 (40%), Gaps = 14/236 (5%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G      +       T      ++Y +A   L  +++ K  +YF       PF   A+++
Sbjct: 33  GCHGLPQKTDE----TATWSNNKLYSEAQDALTGRDWGKCAKYFEALQGRDPFGHFAQQA 88

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------R 146
            +  A+  +   +   A    + +I  +P+  ++ Y YYL GM +               
Sbjct: 89  QINVAYCNWKDNELTAADQAVDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQD 148

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
               D +A +        +V+RY  S Y   A   +    N LA+ EV    YY +RG Y
Sbjct: 149 MSERDPQALRESYDAFKIVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAY 208

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           VAAI R QL +  Y +A   E+A+  ++ +Y  L     A +   ++   +P   +
Sbjct: 209 VAAINRAQLAITQYKNAPAIEDALHIMMLSYTRLNQPQLADDTKRVLAATFPDSPY 264


>gi|261212186|ref|ZP_05926472.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio sp. RC341]
 gi|260838794|gb|EEX65445.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio sp. RC341]
          Length = 241

 Score =  247 bits (631), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 50/218 (22%), Positives = 89/218 (40%), Gaps = 10/218 (4%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             V       E+Y +A   L+   +  A E        +PF   + +  L   +  Y   
Sbjct: 22  PEVVPDVPPSELYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKND 81

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD----------VPYDQRATKLM 158
                 +  E +    P  + +D+V Y+ G+++    R+             D    K  
Sbjct: 82  DLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNVDRFDRDPEPVKAA 141

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
                ++++RY NSPY + A+  +   +N+LA  ++    +YL+R  ++AAI R Q +  
Sbjct: 142 FADFKKLLQRYPNSPYAEDAQRRMYALKNRLAEYDLATADFYLRREAWIAAINRTQELQK 201

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            Y D E A +A+   +EAY  L L +       L+Q  
Sbjct: 202 TYPDTEAARKALEIQLEAYQQLGLTEAVERTKLLMQLN 239


>gi|257453789|ref|ZP_05619067.1| DNA uptake lipoprotein [Enhydrobacter aerosaccus SK60]
 gi|257448716|gb|EEV23681.1| DNA uptake lipoprotein [Enhydrobacter aerosaccus SK60]
          Length = 360

 Score =  247 bits (631), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 62/259 (23%), Positives = 115/259 (44%), Gaps = 15/259 (5%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVY-----LDSVTDVRYQREVYEKAVLFLKE 70
            + L K       ++A+  L G +   +  ++     + +    + ++  Y+ A   +K+
Sbjct: 1   MHHLSKVVGVTAITVALTTLSGCQTLKNSKLFGGKDEVVATKAEKSEQGYYQAASDNIKK 60

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
            N +KA    N     +P    + ++LL   + QY  G Y  A +  + +I  YP +  V
Sbjct: 61  GNLAKAISQLNDLRTFYPVGDYSEQALLDLMYAQYQHGDYLDAIASADRFIQSYPSNPQV 120

Query: 131 DYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           DY YY+ G+S  Q           +     D   +++      +++ R+ NS Y   A  
Sbjct: 121 DYAYYVRGISNMQAASGGVMKYTKLNPAHRDMGYSRIAFNNFQQLINRFPNSAYAPDAAL 180

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
            +    NQL+  E+++ R+Y+KR  YVAA  R + V   Y  +E   E++A +  +Y  L
Sbjct: 181 RMRYIYNQLSESEMDVARWYIKRKAYVAAANRAKWVFQYYPQSEAIPESIATIAYSYDKL 240

Query: 241 ALMDEAREVVSLIQERYPQ 259
            + D A +   L++  YP 
Sbjct: 241 GMTDTANQYKQLLRINYPG 259


>gi|319794366|ref|YP_004156006.1| outer membrane assembly lipoprotein yfio [Variovorax paradoxus EPS]
 gi|315596829|gb|ADU37895.1| outer membrane assembly lipoprotein YfiO [Variovorax paradoxus EPS]
          Length = 268

 Score =  246 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 60/237 (25%), Positives = 99/237 (41%), Gaps = 16/237 (6%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
            G              T       +Y +A        + KA   + +         +A++
Sbjct: 22  TGCSSTKEDK------TASWSPNRIYSEAKEESSSGAYDKAVPLYEKLEGRAAGTPLAQQ 75

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV------- 148
           + L  A+ QY  G+   A +  + ++  +P S  +DY  YL G+        +       
Sbjct: 76  AQLEKAYAQYKGGEKASAIATIDRFMKLHPASPALDYALYLKGVINFNDDLGMFAFLTRQ 135

Query: 149 ---PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
                DQ+A K   +    +V R+ +S Y   AR  +    N LA  EV + RYY  RG 
Sbjct: 136 DLSERDQKAAKESFESFRDLVTRFPDSRYAPDARQRMNYIVNSLAQYEVHVARYYYTRGA 195

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           Y+AAI R Q+ LA+Y +    EEA+  +V++Y AL + D   +   ++   YPQ  +
Sbjct: 196 YLAAINRAQIALADYREVPALEEALYIMVKSYDALGMKDLRDDAQRVLTTNYPQSTY 252


>gi|295676472|ref|YP_003604996.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp.
           CCGE1002]
 gi|295436315|gb|ADG15485.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp.
           CCGE1002]
          Length = 286

 Score =  246 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 53/221 (23%), Positives = 93/221 (42%), Gaps = 10/221 (4%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           T      ++Y +A   L   ++ K  +YF       PF   A+++ +  A+  +   +  
Sbjct: 50  TATWNNNKLYTEANDALTGGDWGKCAKYFELLEGRDPFGHFAQQAQINVAYCNWKDNENA 109

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPYDQRATKLMLQY 161
            A    + +I  +P+  ++ Y YYL GM +                   D ++ +     
Sbjct: 110 AADQAIDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPKSLRESYDA 169

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
              +V+R+ NS Y   A   +    N LA+ EV    YY +RG YVAAI R QL L  Y 
Sbjct: 170 FKVVVDRFPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLALREYK 229

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           +A   E+A+  ++ +Y  L     A +   ++   +P   +
Sbjct: 230 NAPAIEDALHIMILSYEKLNNQQLADDTRRVLAGTFPDSPY 270



 Score = 42.4 bits (99), Expect = 0.062,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 38/111 (34%), Gaps = 22/111 (19%)

Query: 80  FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125
           F      FP +  A  +               + +A   Y  G Y  A +  +  + +Y 
Sbjct: 170 FKVVVDRFPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLALREYK 229

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            +  ++   +++ +SY ++           +L       +   + +SPYV 
Sbjct: 230 NAPAIEDALHIMILSYEKLNNQ--------QLADDTRRVLAGTFPDSPYVT 272


>gi|149190360|ref|ZP_01868633.1| hypothetical protein VSAK1_14142 [Vibrio shilonii AK1]
 gi|148835849|gb|EDL52813.1| hypothetical protein VSAK1_14142 [Vibrio shilonii AK1]
          Length = 241

 Score =  246 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 46/227 (20%), Positives = 92/227 (40%), Gaps = 14/227 (6%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
             + ++V +  V       ++Y +A   L+  N++ A E        +PF     +  L 
Sbjct: 17  GCADKEVTVPDVP----PSQLYAEAQESLQGGNWTSAIERLEALDSRYPFGAYTEQVQLD 72

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVP 149
             +  Y         +  E +    P  +  D+V Y+ G+++             I    
Sbjct: 73  LIYAYYKNDDLALGLATIERFSRLNPTHERSDWVLYMRGLTHMAQDRNFMHDILRIDRSD 132

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
            D    K       R+++RY NS Y + A+  +   +N+LA  ++    +Y++R  ++AA
Sbjct: 133 RDPEPVKAAFADFDRLLKRYPNSAYAEDAQKRMVALKNRLAKYDLATADFYIRREAWIAA 192

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           I R Q +   Y D E A +++    +AY  L + ++      L++  
Sbjct: 193 INRAQEIQKTYPDTEAARQSLVLQKKAYEELGMQEQVERTEKLMELN 239


>gi|190575602|ref|YP_001973447.1| putative competence lipoprotein [Stenotrophomonas maltophilia
           K279a]
 gi|190013524|emb|CAQ47159.1| putative competence lipoprotein precursor [Stenotrophomonas
           maltophilia K279a]
          Length = 295

 Score =  246 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 66/263 (25%), Positives = 116/263 (44%), Gaps = 18/263 (6%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           LT    + V    G  R + +    D  T V    ++YEK+   ++  N+S A   F + 
Sbjct: 14  LTALLLVLVIAATGCHRGAKKGDRPDEGTPV---EQLYEKSHKLMQGGNWSGAETSFRRL 70

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +P+     ++++ +A+ QY AGK+  A S  + +I  YP  +N+ Y+YYL G++ + 
Sbjct: 71  VAQYPYGPYTEQAMIETAYAQYKAGKHDDAVSSIDRFIRTYPTHRNIAYLYYLRGLANSN 130

Query: 144 M----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
                      +     D           + +V+RY NS Y   AR  +   R+  A  E
Sbjct: 131 RSTVFLRRVWSLDASRRDLSTPHQAYSDFNIVVDRYPNSRYAADARQRMLELRDVFAQHE 190

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           ++   YY++RG +V+A  R   +L  Y  +    +A+A L ++Y  L     A +   ++
Sbjct: 191 LDNALYYMRRGAWVSAAGRANYLLETYPQSAFQYDAVAVLADSYTHLGNKTLADDARRVL 250

Query: 254 QERYPQ-----GYWARYVETLVK 271
           Q   P      G W +Y   + K
Sbjct: 251 QLNQPDHPWLEGKWPKYPWMIRK 273


>gi|167562572|ref|ZP_02355488.1| competence lipoprotein ComL [Burkholderia oklahomensis EO147]
 gi|167569755|ref|ZP_02362629.1| competence lipoprotein ComL [Burkholderia oklahomensis C6786]
          Length = 274

 Score =  246 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 54/236 (22%), Positives = 94/236 (39%), Gaps = 14/236 (5%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G      +       T      ++Y +A   L   ++ K  +YF       PF   A+++
Sbjct: 27  GCHGLPQKTDE----TAAWSNNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQA 82

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------R 146
            +  A+  +   +   A    + +I  +P+  ++ Y YYL GM +               
Sbjct: 83  QINVAYCNWKDNEAAAADQAIDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQD 142

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
               D +A +        +V+RY  S Y   A   +    N LA+ EV    YY +RG Y
Sbjct: 143 MSERDPQALRESYDAFKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHSADYYYRRGAY 202

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           VAAI R QL +  Y +A   E+A+  ++ +Y  L     A +   ++   +P   +
Sbjct: 203 VAAINRAQLAIKEYKNAPAIEDALHIMMLSYAKLNQPQLADDTKRVLASTFPDSPY 258



 Score = 43.6 bits (102), Expect = 0.029,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 40/111 (36%), Gaps = 22/111 (19%)

Query: 80  FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125
           F      +P +  A  +               + SA   Y  G Y  A +  +  I +Y 
Sbjct: 158 FKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHSADYYYRRGAYVAAINRAQLAIKEYK 217

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            +  ++   +++ +SYA++ +         +L       +   + +SPYV 
Sbjct: 218 NAPAIEDALHIMMLSYAKLNQ--------PQLADDTKRVLASTFPDSPYVT 260


>gi|89075040|ref|ZP_01161481.1| hypothetical protein SKA34_21630 [Photobacterium sp. SKA34]
 gi|89049127|gb|EAR54692.1| hypothetical protein SKA34_21630 [Photobacterium sp. SKA34]
          Length = 242

 Score =  246 bits (629), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 57/243 (23%), Positives = 99/243 (40%), Gaps = 17/243 (6%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           LTI   +AV  L G    S  DV  D          +Y  A   L++ N++ A E     
Sbjct: 4   LTITTLLAVALLSGCS--SKEDVIPDVPPSN-----LYATAQTALQKGNWTSAIEQLEAL 56

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +PF   + +  L   +  Y +       +  E ++   P+    D+V Y+ G+++  
Sbjct: 57  DSRYPFGAYSDQVQLDLIYAYYKSDDLALGEATIERFLRLNPDHPQADWVVYMRGLTHMA 116

Query: 144 MIRD----------VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
             R              D   ++   +    ++ERY  S Y   A+  +   +N+LA  +
Sbjct: 117 QDRSFMHDMFNINRFDRDPTPSRQAFKDFKYLLERYPESEYSADAKTRMIFLKNRLANYD 176

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +    +Y++R  ++AAI R Q +   YSD E A +++A    AY  L L  E      L+
Sbjct: 177 LATVDFYIRREAWIAAINRCQQIQRLYSDTEAARQSLALEKTAYEKLNLQKEVERTDKLM 236

Query: 254 QER 256
           +  
Sbjct: 237 KLN 239


>gi|226953431|ref|ZP_03823895.1| DNA uptake lipoprotein-like protein [Acinetobacter sp. ATCC 27244]
 gi|294649579|ref|ZP_06726998.1| competence protein [Acinetobacter haemolyticus ATCC 19194]
 gi|226835814|gb|EEH68197.1| DNA uptake lipoprotein-like protein [Acinetobacter sp. ATCC 27244]
 gi|292824518|gb|EFF83302.1| competence protein [Acinetobacter haemolyticus ATCC 19194]
          Length = 329

 Score =  246 bits (629), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 54/253 (21%), Positives = 109/253 (43%), Gaps = 14/253 (5%)

Query: 17  YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
           Y++   AL++  + A    VG     S+   +D       ++  +EKA+  L+   ++ A
Sbjct: 6   YKITVLALSLGVASAF---VGCSSNPSKKEVVDKGPQ-SSEQVYFEKALKSLERNQYTDA 61

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            +        FP     +++ L   + ++    Y+   +L + +I   P+  NVDY YY+
Sbjct: 62  VKSLEALDTYFPTGQYTQQAQLELLYAKFKQKDYEGTIALADRFIRLNPQHPNVDYAYYV 121

Query: 137 VGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
            G++  +M          ++    D    K+  Q    ++ R+ +S Y   A   +    
Sbjct: 122 RGVANMEMNYDSLIRYTSLKQAHRDVSYIKVAYQNFVDLIRRFPSSQYSVDAAQRMKYIG 181

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
            +LA  E+   R+ ++R  ++AA  R + VL  Y       EA+A L  +Y  L     +
Sbjct: 182 QELAESEMNAARFNIQRKAWLAAAERARWVLEYYPQTPQTPEALATLAYSYQQLGDKATS 241

Query: 247 REVVSLIQERYPQ 259
           ++ + +++  YP 
Sbjct: 242 QQYIEILKLNYPN 254


>gi|194366932|ref|YP_002029542.1| outer membrane assembly lipoprotein YfiO [Stenotrophomonas
           maltophilia R551-3]
 gi|194349736|gb|ACF52859.1| outer membrane assembly lipoprotein YfiO [Stenotrophomonas
           maltophilia R551-3]
          Length = 289

 Score =  246 bits (629), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 66/263 (25%), Positives = 116/263 (44%), Gaps = 18/263 (6%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           LT    + V    G  R + +    D  T V    ++YEK+   ++  N+S A   F + 
Sbjct: 8   LTALLLVLVIAATGCHRGAKKGDRPDEGTPV---EQLYEKSHKLMQGGNWSGAESSFRRL 64

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +P+     ++++ +A+ QY AGK+  A S  + +I  YP  +N+ Y+YYL G++ + 
Sbjct: 65  VAQYPYGPYTEQAMIETAYAQYKAGKHDDAVSSIDRFIRTYPTHRNIAYLYYLRGLANSN 124

Query: 144 M----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
                      +     D           + +V+RY NS Y   AR  +   R+  A  E
Sbjct: 125 RSTVFLRHVWSLDASRRDLSTPHQAYSDFNIVVDRYPNSRYAADARQRMLELRDVFAQHE 184

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           ++   YY++RG +V+A  R   +L  Y  +    +A+A L ++Y  L     A +   ++
Sbjct: 185 LDNALYYMRRGAWVSAAGRANYLLETYPQSAFQYDAVAVLADSYTHLGNKTLADDARRVL 244

Query: 254 QERYPQ-----GYWARYVETLVK 271
           Q   P      G W +Y   + K
Sbjct: 245 QLNQPDHPWLEGKWPKYPWMIRK 267


>gi|260771110|ref|ZP_05880037.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio furnissii CIP
           102972]
 gi|260613707|gb|EEX38899.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio furnissii CIP
           102972]
 gi|315179285|gb|ADT86199.1| hypothetical protein vfu_A01006 [Vibrio furnissii NCTC 11218]
          Length = 241

 Score =  246 bits (629), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 50/226 (22%), Positives = 95/226 (42%), Gaps = 15/226 (6%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
            S++++  D         ++Y +A   L+  N+  A E        +PF   + +  L  
Sbjct: 19  SSNKEIVPDVPP-----AQLYTEAQTSLQGGNWMTAIEKLEALDSRYPFGAYSEQVQLDL 73

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PY 150
            +  Y         +  E ++   P  + +D+V Y+ G+S+    R+             
Sbjct: 74  IYAYYKNDDLALGLATIERFMRLNPTHEKMDWVLYMRGLSHMAQDRNFMHDLFNVDRSDR 133

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
           D    K       R+++RY NS Y + A+  +   +N+LA  ++    +YL+R  ++AAI
Sbjct: 134 DPEPVKAAFADFKRLLQRYPNSSYAEDAQRRMFALKNRLADYDLATADFYLRREAWIAAI 193

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            R Q +   Y D E A +++   ++AY  L L D       L++  
Sbjct: 194 NRTQELQKTYPDTEAARKSLKIQLQAYKELGLKDSIARTQQLMELN 239


>gi|288940533|ref|YP_003442773.1| outer membrane assembly lipoprotein YfiO [Allochromatium vinosum
           DSM 180]
 gi|288895905|gb|ADC61741.1| outer membrane assembly lipoprotein YfiO [Allochromatium vinosum
           DSM 180]
          Length = 275

 Score =  246 bits (628), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 10/224 (4%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           T+     ++Y +A   L   ++  A E + +    +PF   A ++ L  A+  Y A + +
Sbjct: 30  TEGWSASKLYSEAATELDAGSYEHAIELYQKLEARYPFGRYAMQAQLDVAYAHYRAEEPE 89

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPYDQRATKLMLQY 161
            A +  + +I  YP++  VDY YYL G+                     D  +     + 
Sbjct: 90  DALAAADRFIKLYPQNPYVDYAYYLKGIVNYNRSIGFLDRFIPTDASQRDPGSALDAFKD 149

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
            + +VER+ NS Y + AR  +   R+ LA  EV + RYY+KRG Y+AA  R   V+ +Y 
Sbjct: 150 FAILVERFPNSKYAEDARQRMVYLRSNLAMNEVHVARYYMKRGAYLAAANRANHVIQHYQ 209

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
                ++A+  L++AY AL   D A +   ++     +G +   
Sbjct: 210 RTSAVDDALEVLIDAYRALGKDDLAADAKRVLDLNRQEGRFIAD 253


>gi|149377767|ref|ZP_01895500.1| DNA uptake lipoprotein [Marinobacter algicola DG893]
 gi|149357939|gb|EDM46428.1| DNA uptake lipoprotein [Marinobacter algicola DG893]
          Length = 292

 Score =  246 bits (628), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 57/252 (22%), Positives = 107/252 (42%), Gaps = 17/252 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +      +  + A  F+             D   +V  ++  YE A   +   NF++A +
Sbjct: 15  MRSVVRLLLVTTAALFISACASN-------DKQEEVLPEQTYYENARDAMNSGNFNEAEQ 67

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
             +     +PF   A ++ L   + +Y     + A +  + ++   P+S + DY  Y+ G
Sbjct: 68  NLDYLETYYPFGRYAEQAQLDLIYARYQNLDLEGARAAADRFLRLNPQSDHADYALYMRG 127

Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   +          +     D    +   Q  S ++ RY +S Y   AR  +   RN+
Sbjct: 128 LASYNLDIGLAARYFPVDVSARDPGEQRQAFQDFSELLNRYPSSEYAPDARQRMIAIRNR 187

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E+   RYY+ R  Y+AA  R + ++ NYS     EEA+  L E +  + L   A +
Sbjct: 188 LAELELYAARYYISREAYIAANNRARYIIENYSTTPSVEEALIILAETFRFMDLKKGATD 247

Query: 249 VVSLIQERYPQG 260
            V++++E +P  
Sbjct: 248 AVAMLKENFPDS 259


>gi|315122569|ref|YP_004063058.1| outer membrane assembly lipoprotein YfiO [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495971|gb|ADR52570.1| outer membrane assembly lipoprotein YfiO [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 258

 Score =  246 bits (628), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 146/255 (57%), Positives = 189/255 (74%), Gaps = 2/255 (0%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQ--SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
           +Y+F LTIFF   + FL   + Q   S++    S++D +YQR +YEKAV  L+ +NF KA
Sbjct: 1   MYRFVLTIFFISTLSFLASCKHQNQPSQNFIFPSISDKKYQRNLYEKAVELLENKNFEKA 60

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            + F   S++ PF  VARK+LLMSAF +Y   KY  +ASLGEEYI QYP S+++DYVYYL
Sbjct: 61  SKEFYSFSKELPFNDVARKALLMSAFAKYKTKKYLSSASLGEEYIAQYPNSEDIDYVYYL 120

Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
           VGMSYAQ IR+V YDQ  T+ M+QYMS I+E+Y  SPY KGA+FY+++GRNQLA +E+ +
Sbjct: 121 VGMSYAQKIRNVSYDQHPTQSMVQYMSEILEKYPKSPYSKGAQFYLSIGRNQLAGQEMYV 180

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           GRYYLK  EYV+AI RFQLV+ANY D E  EEAMARLVEAY  L L+DEA  + S+IQ++
Sbjct: 181 GRYYLKNKEYVSAILRFQLVIANYFDTEQVEEAMARLVEAYFMLGLVDEATSMASVIQQK 240

Query: 257 YPQGYWARYVETLVK 271
           YP+G W+ YV  LV+
Sbjct: 241 YPKGLWSDYVSDLVQ 255


>gi|297183635|gb|ADI19761.1| hypothetical protein [uncultured gamma proteobacterium EB000_37F04]
          Length = 256

 Score =  245 bits (627), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 10/210 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y +A   LK +NFS A          +PF   A ++ L   +  YSA ++  A    + 
Sbjct: 1   MYREAQRHLKNENFSLAVRSLQGLESRYPFGQYAEQAQLELIYAHYSAYEFAAANEAADR 60

Query: 120 YITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERY 169
           +I  +P   +VDY YY+ G++   +            D   D    +      ++++ R+
Sbjct: 61  FIRLHPRHPSVDYAYYMKGLAAYDIEPGFFSRFIPSDDTKRDVSHIQTAFAEFAQLLARF 120

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
            +S Y   AR  +   RN LA  E+ +  YY +RG Y+AA+ R + V+ +        + 
Sbjct: 121 PDSAYAPDARQRMVHMRNMLARNEIHVANYYFRRGAYMAALNRGKYVVEHMQQTPSVADG 180

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQ 259
           +A + +AY+ L L D A + ++++ E YP 
Sbjct: 181 LAIMGQAYLLLGLNDLAEDSIAVLCENYPD 210


>gi|121999015|ref|YP_001003802.1| putative lipoprotein [Halorhodospira halophila SL1]
 gi|121590420|gb|ABM63000.1| putative lipoprotein [Halorhodospira halophila SL1]
          Length = 253

 Score =  245 bits (627), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 59/249 (23%), Positives = 102/249 (40%), Gaps = 16/249 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +++       ++      G                 R   E+Y  A   L   N+S+A E
Sbjct: 1   MHRIQRWATIALVALLATGCAGTD------PDGAAERSVEELYTDARSSLSSGNYSQAVE 54

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            F      +PF   A +S LM  +  Y AG+++ A +  E +   +P +++V Y  Y+ G
Sbjct: 55  RFENLVARYPFGTHAVQSQLMIIYAHYLAGQHESAIAAAERFQRMHPRNEHVAYALYMRG 114

Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +S              +     D    +        + E+Y +S Y+  A   +   R  
Sbjct: 115 VSRQAQGPGGLGDLFNVDANLRDPEPKRRAFADFRELTEQYPDSEYIDDAVERMEQIRVA 174

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E+ +GR+YL+R  Y+A+  R + ++A Y       EAM  L E+Y  L L     +
Sbjct: 175 LAEHELYVGRFYLERSAYIASANRARTIIARYPGTPAVPEAMGMLAESYRRLGLDPLDED 234

Query: 249 VVSLIQERY 257
           V   ++ER+
Sbjct: 235 VERALRERH 243


>gi|52425875|ref|YP_089012.1| NrfG protein [Mannheimia succiniciproducens MBEL55E]
 gi|52307927|gb|AAU38427.1| NrfG protein [Mannheimia succiniciproducens MBEL55E]
          Length = 297

 Score =  245 bits (627), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 55/248 (22%), Positives = 110/248 (44%), Gaps = 17/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + KF      +++V  +             +   +   ++E++     +L+E N+++A  
Sbjct: 1   MRKFKSLTLIALSVLVIASCSSS-------EKPVEQASEQELFSTGANYLQEGNYTQATR 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
           Y       FP +  + ++ L   F  Y +  Y +  +  + ++ Q+P+S+++DYV Y+  
Sbjct: 54  YLEAVDSRFPGSSYSEQAELNLIFSTYKSQDYTKTLTTADRFLQQFPQSQHLDYVLYMAA 113

Query: 139 MSY-------AQMIRDVPYDQRAT---KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++         Q    V    R T   K        +V+ + NSPY   A   +   +++
Sbjct: 114 LTNSALGDNLFQDFFGVDRSTRETTSMKTAFNNFQTLVQNFPNSPYTPDALARMAYIKDR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E+EI ++Y KR  +VA   R   +L +Y D +   EA+  L E+Y  + L   A +
Sbjct: 174 LARHELEIAKFYAKRSAWVATSNRITGMLRSYPDTQATLEALPLLQESYEKMGLTQLASQ 233

Query: 249 VVSLIQER 256
             +L++  
Sbjct: 234 AATLVKAN 241



 Score = 38.9 bits (90), Expect = 0.80,   Method: Composition-based stats.
 Identities = 13/128 (10%), Positives = 30/128 (23%), Gaps = 32/128 (25%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              +Y+  +  R+  S Y + A   +                   K  +Y   +      
Sbjct: 50  QATRYLEAVDSRFPGSSYSEQAELNLIFST--------------YKSQDYTKTLTTADRF 95

Query: 217 LANYSDAEHAEEAMARLVEAYVALALM------------------DEAREVVSLIQERYP 258
           L  +  ++H +  +        AL                       A      + + +P
Sbjct: 96  LQQFPQSQHLDYVLYMAALTNSALGDNLFQDFFGVDRSTRETTSMKTAFNNFQTLVQNFP 155

Query: 259 QGYWARYV 266
              +    
Sbjct: 156 NSPYTPDA 163


>gi|261250363|ref|ZP_05942939.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio orientalis CIP
           102891]
 gi|260939479|gb|EEX95465.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio orientalis CIP
           102891]
          Length = 241

 Score =  245 bits (626), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 56/231 (24%), Positives = 97/231 (41%), Gaps = 17/231 (7%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
           VG    SS +V  D         E+Y  A + L+  N+  A E        +PF   + +
Sbjct: 16  VGCS--SSEEVVPDVPP-----SELYSDAQISLQSGNWLTAIEKLEALDSRYPFGAYSEQ 68

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV------- 148
             L   +  Y         +  E ++   P  + +D+V Y+ G+++    R+        
Sbjct: 69  VQLDLIYAYYKNDDLALGLATIERFMRLNPTQEKLDWVLYMRGLTHMAQDRNFMHDLFNV 128

Query: 149 ---PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
                D    K       +++ERY NSPY + ++  +   +N+LA  ++    +YL+R  
Sbjct: 129 DRSDRDPEPVKKAFADFKKLLERYPNSPYAEDSQKRMYALKNRLAEYDLATADFYLRREA 188

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           ++AAI R Q +   Y D E A +++   +EAY  L L D       LI+  
Sbjct: 189 WIAAINRTQELQKTYPDTEAARKSLDIQLEAYKQLNLQDAVERTEKLIELN 239


>gi|187923830|ref|YP_001895472.1| outer membrane assembly lipoprotein YfiO [Burkholderia phytofirmans
           PsJN]
 gi|187715024|gb|ACD16248.1| outer membrane assembly lipoprotein YfiO [Burkholderia phytofirmans
           PsJN]
          Length = 286

 Score =  245 bits (626), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 10/221 (4%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           T      ++Y +A   L   +F K  +YF       PF   A+++ +  A+  +   +  
Sbjct: 50  TATWNNNKLYTEANDALSGGDFGKCAKYFEMLEGRDPFGHFAQQAQINVAYCNWKDNENA 109

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPYDQRATKLMLQY 161
            A    + +I  +P+  ++ Y YYL GM +                   D ++ +     
Sbjct: 110 AADQAIDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPKSLRESYDA 169

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
              +V++Y NS Y   A   +    N LA+ EV    YY +RG YVAAI R QL L  Y 
Sbjct: 170 FKVVVDKYPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLALTQYK 229

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           +A   E+A+  ++ +Y  L     A +   ++   +P   +
Sbjct: 230 NAPAIEDALHIMMLSYEKLNQPQLADDTKRVLAGTFPDSPY 270


>gi|238897771|ref|YP_002923450.1| outer membrane protein assembly complex subunit, DNA uptake
           lipoprotein [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|229465528|gb|ACQ67302.1| outer membrane protein assembly complex subunit, DNA uptake
           lipoprotein [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 242

 Score =  245 bits (626), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 59/239 (24%), Positives = 104/239 (43%), Gaps = 17/239 (7%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            +  SI    L    +  ++ +  D         E+Y  A   L E NF +A        
Sbjct: 7   LVIPSIFALTLSACSK--NKRIVPDQP-----ASELYAVAQKALSEGNFREAITQLEALD 59

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS---- 140
             FPF G +++  L   +  Y + +   A +  + +I   P S N+DYV YL G++    
Sbjct: 60  TRFPFGGYSQQVQLDLIYAYYKSDQLALAQASIDRFIRLNPTSPNIDYVLYLRGLTEMGL 119

Query: 141 ------YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
                     +     D        +   ++++ + NS Y+  A+  +   +++LA  E+
Sbjct: 120 DENQLQNFFGVDRSDRDPEHALRAFRDFQQLIQYHPNSTYLADAQKRLIFLKDRLATHEL 179

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            + +YY+KR  YVA I R + +L NY D +    A+  + +AY  L L ++A +V  LI
Sbjct: 180 AVVQYYIKREAYVAVINRVEEMLKNYPDTQATRTALPLMEQAYRKLQLHEQADKVAKLI 238


>gi|170692347|ref|ZP_02883510.1| putative competence lipoprotein, ComL [Burkholderia graminis C4D1M]
 gi|170142777|gb|EDT10942.1| putative competence lipoprotein, ComL [Burkholderia graminis C4D1M]
          Length = 286

 Score =  245 bits (626), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 55/221 (24%), Positives = 93/221 (42%), Gaps = 10/221 (4%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           T      ++Y +A   L   +F K  +YF       PF   A+++ +  A+  +   +  
Sbjct: 50  TATWNNNKLYTEANDALSGGDFGKCAKYFEMLEGRDPFGHFAQQAQINVAYCNWKDNEAA 109

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPYDQRATKLMLQY 161
            A    + +I  +P+  ++ Y YYL GM +                   D ++ +     
Sbjct: 110 AADQAIDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPKSLRESYDA 169

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
              +V+RY NS Y   A   +    N LA+ EV    YY +RG YVAAI R QL L  Y 
Sbjct: 170 FKVVVDRYPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLALKEYK 229

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           +A   E+A+  ++ +Y  L     A +   ++   +P   +
Sbjct: 230 NAPAIEDALHIMMLSYQRLNQPQLADDTKRVLAGTFPDSPY 270



 Score = 41.3 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 39/111 (35%), Gaps = 22/111 (19%)

Query: 80  FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125
           F      +P +  A  +               + +A   Y  G Y  A +  +  + +Y 
Sbjct: 170 FKVVVDRYPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLALKEYK 229

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            +  ++   +++ +SY ++ +         +L       +   + +SPYV 
Sbjct: 230 NAPAIEDALHIMMLSYQRLNQ--------PQLADDTKRVLAGTFPDSPYVT 272


>gi|254525277|ref|ZP_05137332.1| competence lipoprotein [Stenotrophomonas sp. SKA14]
 gi|219722868|gb|EED41393.1| competence lipoprotein [Stenotrophomonas sp. SKA14]
          Length = 289

 Score =  245 bits (626), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 66/263 (25%), Positives = 116/263 (44%), Gaps = 18/263 (6%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           LT    + V    G  R + +    D  T V    ++YEK+   ++  N+S A   F + 
Sbjct: 8   LTALLLVLVIAATGCHRGAKKGDRPDEGTPV---EQLYEKSHKLMQGGNWSGAETSFRRL 64

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +P+     ++++ +A+ QY AGK+  A S  + +I  YP  +N+ Y+YYL G++ + 
Sbjct: 65  VAQYPYGPYTEQAMIETAYAQYKAGKHDDAVSSIDRFIRTYPTHRNIAYLYYLRGLANSN 124

Query: 144 M----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
                      +     D           + +V+RY NS Y   AR  +   R+  A  E
Sbjct: 125 RSTVFLRRVWSLDASRRDLSTPHQAYSDFNIVVDRYPNSRYAADARSRMLELRDVFAQHE 184

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           ++   YY++RG +V+A  R   +L  Y  +    +A+A L ++Y  L     A +   ++
Sbjct: 185 LDNALYYMRRGAWVSAAGRANYLLETYPQSAFQYDAVAVLADSYTHLGNKTLADDARRVL 244

Query: 254 QERYPQ-----GYWARYVETLVK 271
           Q   P      G W +Y   + K
Sbjct: 245 QLNQPDHPWLEGKWPKYPWMIRK 267


>gi|121602062|ref|YP_989220.1| putative lipoprotein [Bartonella bacilliformis KC583]
 gi|120614239|gb|ABM44840.1| putative lipoprotein [Bartonella bacilliformis KC583]
          Length = 279

 Score =  245 bits (626), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 83/253 (32%), Positives = 126/253 (49%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K  + +           W +  +       V  +     VY +A+         +A +
Sbjct: 1   MRKILIGVCGGGIFLLAGCWFKDKNALDPAVHVLKIDSPDVVYAQALSHFHSGKLDEALK 60

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            F+       +    RKSL+MSA   Y   KY  A S  + YIT YP + +  Y YYLVG
Sbjct: 61  KFSIIEEQHAYTEWGRKSLIMSASTNYRLAKYDDAISAAQRYITLYPTAGDAAYAYYLVG 120

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           +S  Q I  V  DQ+ TK  +  M  ++ERY  S YV  A+  +  GR QLA +E++IGR
Sbjct: 121 LSSFQQISHVTRDQQDTKRAIAAMQLLIERYPESDYVNDAKAKILFGREQLAGQEMQIGR 180

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           YY +  +Y+AA  RF+ V+  YSD +  EEA+ RL E   AL L++EA+    +++  YP
Sbjct: 181 YYERGQQYLAASRRFRTVIEEYSDTKQIEEALFRLTEVSFALGLIEEAQTAAVMLERYYP 240

Query: 259 QGYWARYVETLVK 271
           +  W ++   L+K
Sbjct: 241 ESSWYKFASDLLK 253


>gi|254292784|ref|YP_003058807.1| outer membrane assembly lipoprotein YfiO [Hirschia baltica ATCC
           49814]
 gi|254041315|gb|ACT58110.1| outer membrane assembly lipoprotein YfiO [Hirschia baltica ATCC
           49814]
          Length = 260

 Score =  245 bits (625), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 81/248 (32%), Positives = 135/248 (54%), Gaps = 3/248 (1%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L +  S +   +      SS D   D     +   ++Y +A   +  + + +A   F + 
Sbjct: 9   LLVTISASALIMTSC---SSSDRKKDLAYIEKPVEQLYNEAGRSVDRKQWDRAALEFQEV 65

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
            R  P++  A +++LM+A+VQY + +Y +  +   +Y   YP SK+  Y YYL+ +S+  
Sbjct: 66  QRQHPYSEWAERAMLMTAYVQYKSRQYAEVEASAGQYTALYPSSKSAAYAYYLIALSHFD 125

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
            I DV  DQ  T+L L  +  +V RY  + Y + A   + + R+QLA KE+E+GRYYLK 
Sbjct: 126 QITDVGRDQGRTELALSALQDVVRRYPTTEYARDAELKIDMVRDQLAGKEMEVGRYYLKS 185

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
            E++AAI RF+ V+  Y    HA EA+ RLVEAY+++ L+ +A+   +++   YP   W 
Sbjct: 186 SEFLAAINRFKRVVDEYETTTHAPEALHRLVEAYLSIGLVGQAQAAAAVLGHNYPSSRWY 245

Query: 264 RYVETLVK 271
           R    L++
Sbjct: 246 RDSYKLME 253


>gi|319786172|ref|YP_004145647.1| outer membrane assembly lipoprotein YfiO [Pseudoxanthomonas
           suwonensis 11-1]
 gi|317464684|gb|ADV26416.1| outer membrane assembly lipoprotein YfiO [Pseudoxanthomonas
           suwonensis 11-1]
          Length = 297

 Score =  244 bits (624), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 63/248 (25%), Positives = 118/248 (47%), Gaps = 15/248 (6%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
                RD       + R   E+YEK   +++  N++ A   F +    +P+     ++L+
Sbjct: 30  ATGCGRDKKKKDADEGRPVAELYEKGHGYMERGNWTGAETVFRRLVAQYPYGPYTEQALM 89

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDV 148
            +A+ QY AG++ +A S  + +I  YP  +N+ Y YYL G+S +                
Sbjct: 90  ETAYAQYKAGRHDEAVSTIDRFIRTYPTHRNIAYFYYLRGLSNSNRDAVFMQRVWSLDPS 149

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
             D  + +   +  + + +RY NS Y   AR  + V RN  A  E++I  YY++RG +++
Sbjct: 150 RRDLSSPQQAYEDFNTVAQRYPNSRYAPDARQRMVVLRNVFARHEMDIALYYMRRGAWLS 209

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ-----GYWA 263
           A+ R + +L  Y  +++  +A+A L E+Y  L     + + + +++   PQ     G W 
Sbjct: 210 AVSRAKYILETYPQSDYQYDAIAALAESYDNLGQKQLSEDAIRVLRLNDPQHPYLSGDWP 269

Query: 264 RYVETLVK 271
           +Y   + K
Sbjct: 270 KYPWAIRK 277


>gi|119476935|ref|ZP_01617216.1| competence protein ComL [marine gamma proteobacterium HTCC2143]
 gi|119449742|gb|EAW30979.1| competence protein ComL [marine gamma proteobacterium HTCC2143]
          Length = 294

 Score =  244 bits (624), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 61/250 (24%), Positives = 114/250 (45%), Gaps = 18/250 (7%)

Query: 19  LYKFALTIFFSI-AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           + + A +IF S+  +  L G           D V     ++E+YE A   L+++++  A 
Sbjct: 1   MNRLAKSIFLSVFLLAGLAGCSSD-------DEVPQDMTEKELYESAQDSLRQESYQNAV 53

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           +        FPF   A ++ L   +  Y   + + + +  + +I  +P+  N DY YY+ 
Sbjct: 54  KKLQLLEARFPFGPYAEQAQLEIIYAHYLNFESEASIAAADRFIRLHPQHPNADYAYYIK 113

Query: 138 GMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           G++                    D  A     +   +++ RY +SPY   A+  +   R 
Sbjct: 114 GLANYVEGEGFLDRFLPTDMTMRDPGAALQSFEDFRQLLYRYPDSPYASDAKARMLYLRA 173

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
           +LA  E+ +  YY +RG Y+AA  R + V+ N+       +A+A +V+AY  L+L D A 
Sbjct: 174 RLARYEINVANYYFERGAYIAAANRGRYVVENFPQTPATADALAVMVQAYQLLSLDDLAA 233

Query: 248 EVVSLIQERY 257
           + ++++ E Y
Sbjct: 234 DALAMLNENY 243


>gi|296157779|ref|ZP_06840613.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp. Ch1-1]
 gi|295892025|gb|EFG71809.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp. Ch1-1]
          Length = 286

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 10/221 (4%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           T      ++Y +A   L   +F K  +YF       PF   A+++ +  A+  +   +  
Sbjct: 50  TATWNNNKLYTEANDALTGGDFGKCAKYFEMLEGRDPFGHFAQQAQINVAYCNWKDNENA 109

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPYDQRATKLMLQY 161
            A    + +I  +P+  ++ Y YYL GM +                   D ++ +     
Sbjct: 110 AADQAIDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPKSLRESYDA 169

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
              +V++Y NS Y   A   +    N LA+ EV    YY +RG YVAAI R QL L  Y 
Sbjct: 170 FKIVVDKYPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLALTQYK 229

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           +A   E+A+  ++ +Y  L     A +   ++   +P   +
Sbjct: 230 NAPAIEDALHIMMLSYQRLNQPQLADDTKRVLAGTFPDSPY 270


>gi|332530534|ref|ZP_08406473.1| putative transmembrane protein [Hylemonella gracilis ATCC 19624]
 gi|332040009|gb|EGI76396.1| putative transmembrane protein [Hylemonella gracilis ATCC 19624]
          Length = 276

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 60/227 (26%), Positives = 101/227 (44%), Gaps = 10/227 (4%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
            D  T      E+ E+A   ++   +++A   F +         +A+++ L  A+ QY  
Sbjct: 29  PDDPTAKMKPEEILEQAREEVRNFQYTQAVTLFEKLEGRAAGTPLAQQAQLEKAYAQYKD 88

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKL 157
            +  QA +  + ++  +P S  +DY  YL G+        +            DQ A K 
Sbjct: 89  DQSAQAVATLDRFMRLHPASPAIDYALYLKGLVNFNDDLGLFSFITRQDLSERDQLAAKE 148

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
                + +V R+ +S Y   AR  +    N LA  EV + RYY KRG YVAAI R Q  +
Sbjct: 149 SWSAFNELVTRFPDSRYSADARARMVYIVNTLARYEVHVARYYFKRGAYVAAINRAQQAV 208

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
           A+Y  A   E+A+  LV++Y AL +     +   ++   +P   + +
Sbjct: 209 ADYRTAPALEDALQILVDSYEALNMPQLRDDARRVLATNFPNSAYLK 255


>gi|91788478|ref|YP_549430.1| hypothetical protein Bpro_2616 [Polaromonas sp. JS666]
 gi|91697703|gb|ABE44532.1| putative transmembrane protein [Polaromonas sp. JS666]
          Length = 274

 Score =  243 bits (622), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 65/245 (26%), Positives = 105/245 (42%), Gaps = 11/245 (4%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
              AVC L       S     D  T      ++Y +A        + KA   + +     
Sbjct: 15  LVAAVCALSFVVAGCSTTPEPDK-TATWSPNKIYAEAKDEASSGAYDKAIPLYEKLEGRA 73

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ---- 143
               +A+++ +  A+ QY  G+  QA +  + ++  +P S  +DY  YL G+        
Sbjct: 74  AGTPLAQQAQIEKAYAQYKGGEQPQAIATLDRFMKLHPASPAMDYALYLKGLVNFNDNLG 133

Query: 144 ------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
                        DQ+A K   +    +V R+ +S Y   AR  +    N LA  EV + 
Sbjct: 134 LFSFISRQDLSERDQKAAKESFESFRDLVNRFPDSRYTPDARLRMAYIVNSLAQSEVHVA 193

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           RYY  RG YVAAI R Q  +A Y D    EEA   L ++Y AL +++   ++  ++++ Y
Sbjct: 194 RYYYSRGAYVAAINRAQAAIAEYRDVPALEEATYILYKSYDALGMVELRDDMRRIMEKSY 253

Query: 258 PQGYW 262
           PQ  +
Sbjct: 254 PQSQY 258


>gi|225023855|ref|ZP_03713047.1| hypothetical protein EIKCOROL_00721 [Eikenella corrodens ATCC
           23834]
 gi|224943329|gb|EEG24538.1| hypothetical protein EIKCOROL_00721 [Eikenella corrodens ATCC
           23834]
          Length = 269

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 61/255 (23%), Positives = 116/255 (45%), Gaps = 14/255 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLD-SVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           + K  L    ++    L      S+  V  D  +T      ++Y +A   ++ +N+S++ 
Sbjct: 1   MKKILLVTGLAV---MLSACSSTSTTAVSQDAQITQDWSVDKLYAEAHDEMESRNYSRSV 57

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
             +      FP    A +S L +A+V Y   +  QA +  E+++  YP   N DY  YL 
Sbjct: 58  RLYEILRARFPNTRQAVQSRLDTAYVYYKDEQQPQALAHVEQFLKLYPNHPNTDYALYLK 117

Query: 138 GMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           G+      + +            D +A +   Q  + ++ R+ +S Y   AR  +    +
Sbjct: 118 GLIVLNQDKSIFNKLASQDWSDRDPKANREAYQVFNELITRFPDSKYANDAREKMARLVD 177

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
            L   E+ I RYY++RG Y+AA  R Q +++ Y +  + EEA+A ++ AY  L   + + 
Sbjct: 178 ALGGNEMAIARYYMQRGAYLAAANRAQGIVSRYQNTRYVEEALAIMMTAYARLEKPELSS 237

Query: 248 EVVSLIQERYPQGYW 262
           +   ++ + +PQ  +
Sbjct: 238 DTRRVLAQNFPQSPY 252


>gi|91783469|ref|YP_558675.1| putative competence lipoprotein, ComL [Burkholderia xenovorans
           LB400]
 gi|91687423|gb|ABE30623.1| Putative competence lipoprotein, ComL [Burkholderia xenovorans
           LB400]
          Length = 286

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 10/221 (4%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           T      ++Y +A   L   +F K  +YF       PF   A+++ +  A+  +   +  
Sbjct: 50  TATWNNNKLYTEANDALTGGDFGKCAKYFEMLEGRDPFGHFAQQAQINVAYCNWKDNENA 109

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPYDQRATKLMLQY 161
            A    + +I  +P+  ++ Y YYL GM +                   D ++ +     
Sbjct: 110 AADQAIDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPKSLRESYDA 169

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
              +V++Y NS Y   A   +    N LA+ EV    YY +RG YVAAI R QL L  Y 
Sbjct: 170 FKIVVDKYPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLALTQYK 229

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           +A   E+A+  ++ +Y  L     A +   ++   +P   +
Sbjct: 230 NAPAIEDALHIMMLSYQRLNQPQLADDTKRVLAGTFPDSPY 270


>gi|262376644|ref|ZP_06069872.1| competence lipoprotein comL [Acinetobacter lwoffii SH145]
 gi|262308354|gb|EEY89489.1| competence lipoprotein comL [Acinetobacter lwoffii SH145]
          Length = 321

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 60/254 (23%), Positives = 108/254 (42%), Gaps = 17/254 (6%)

Query: 17  YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSK 75
           Y++   A+T+  + A+   VG      ++V            +VY +KA   L    ++ 
Sbjct: 6   YKMTMLAVTLGIASAM---VGCSSNPKKEVVDKGPE---SSEQVYIQKAQKALDRNQYTD 59

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A +        FP +  A ++ L   +V++    Y+ A +L E +I   P+  NVDY YY
Sbjct: 60  AAKQLEALETYFPTSQYAPQAQLELLYVKFQQKDYEGAVALAERFIRLNPQHPNVDYAYY 119

Query: 136 LVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           + G+S  +           ++    D    K+  Q     + RY +S Y   A   +   
Sbjct: 120 VRGVSNMEQNYNGLLRYTSLKQSHRDVSYLKVAYQNFVDFIRRYPSSTYAVDAAQRMQFI 179

Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
             +LA  E+   R+ +KR  Y+AA+ R   V+ +Y       EA+A +   Y  L     
Sbjct: 180 GQELAEHEMNAARFNIKRKAYLAAVERGLWVIEHYPQTPQIPEALATVAYGYAQLGDKAT 239

Query: 246 AREVVSLIQERYPQ 259
           +++ V +++  YP 
Sbjct: 240 SQQYVDVLKLNYPN 253


>gi|110833336|ref|YP_692195.1| competence lipoprotein ComL [Alcanivorax borkumensis SK2]
 gi|110646447|emb|CAL15923.1| competence lipoprotein ComL, putative [Alcanivorax borkumensis SK2]
          Length = 272

 Score =  242 bits (618), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 54/227 (23%), Positives = 99/227 (43%), Gaps = 10/227 (4%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
                   + + Y +A   ++ +N+  A +   +    FP+   A +S L   + QY + 
Sbjct: 21  PEDRPELTEADQYREARESIESKNYLTAIDQLKELEARFPYGDYAEQSALDLIYAQYKSV 80

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLM 158
            Y       + ++  +P    +DY  Y+ G++   M                D  A K  
Sbjct: 81  DYPATVVAAQRFMRNHPAHPRMDYALYMRGLANFNMEKGLFDNMVASDRSSKDMAAAKDA 140

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
            +   R+V R+ +S Y   AR  +   RNQLA +E+ + RYY +RG  VA++ R Q V+ 
Sbjct: 141 FRDFERLVSRFPDSEYAPDARARMVHIRNQLARQELHVARYYARRGAIVASLNRAQYVVK 200

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
           +Y      EE++A +V+ Y  L L  +A +  +++   +P   +   
Sbjct: 201 HYQHTPAVEESLAIMVKGYQRLELPKQAEKSRAVLALNWPNSTFLDD 247


>gi|239815170|ref|YP_002944080.1| outer membrane assembly lipoprotein YfiO [Variovorax paradoxus
           S110]
 gi|239801747|gb|ACS18814.1| outer membrane assembly lipoprotein YfiO [Variovorax paradoxus
           S110]
          Length = 268

 Score =  242 bits (618), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 59/236 (25%), Positives = 98/236 (41%), Gaps = 16/236 (6%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G    S         T       +Y +A   +    + KA   + +         +A+++
Sbjct: 23  GCSSTSVDK------TANWSPNRIYAEAKDEVGSGAYDKAVPLYEKLEGRAAGTPLAQQA 76

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV-------- 148
            L  A+ QY +G+   A +  + ++  +P S  +DY  YL G+        +        
Sbjct: 77  QLEKAYAQYKSGEKANAIATIDRFLKLHPASPAIDYALYLKGVINFNDDLGMFAFLTRQD 136

Query: 149 --PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
               DQ+A K   +    +  R+  S Y   AR  +    N LA  EV + RYY  RG Y
Sbjct: 137 LSERDQKAAKESFESFKELATRFPESRYAPDARQRMNYIVNSLAQYEVHVARYYYSRGAY 196

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           +AAI R QL L++Y +    EEA+  +V +Y AL + D   +   ++   YP   +
Sbjct: 197 LAAINRAQLALSDYREVPALEEALYIIVRSYDALGMKDLRDDAQRVLTTNYPHSEY 252


>gi|220933993|ref|YP_002512892.1| putative competence lipoprotein precursor [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219995303|gb|ACL71905.1| putative competence lipoprotein precursor [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 254

 Score =  241 bits (617), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 10/220 (4%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
             T      ++Y +A   L   NF +A  Y+      FPF+  A+++ L  A+  + A +
Sbjct: 27  DPTRDWSASQLYTEARAALDRGNFDQAVSYYESLEARFPFSRFAQQAQLEVAYAYHKADE 86

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-----MIRDVPYDQR-----ATKLML 159
            + A +  + +I   P    VDY YYL G+  A      + R  P D         +   
Sbjct: 87  PEMALAAADRFIQINPRHPYVDYAYYLKGLVNANRGQGYLQRWFPRDPSSRNPAHLRQAF 146

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
              S +V  + +S Y + A   +   RN LAA E+ +  +Y++RG ++AA  R + V+  
Sbjct: 147 DDFSTLVGNFPDSRYAEDAHQRLIYLRNMLAAHELHVANFYMRRGAWLAAAQRARTVIER 206

Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           Y +A+   +A+  +V AY  L L D A + + ++    P+
Sbjct: 207 YPEADSNLDALEVMVRAYRELELNDLANDALRVLTLNDPE 246


>gi|71276442|ref|ZP_00652718.1| putative lipoprotein [Xylella fastidiosa Dixon]
 gi|71901553|ref|ZP_00683636.1| putative lipoprotein [Xylella fastidiosa Ann-1]
 gi|170730992|ref|YP_001776425.1| putative lipoprotein [Xylella fastidiosa M12]
 gi|71162758|gb|EAO12484.1| putative lipoprotein [Xylella fastidiosa Dixon]
 gi|71728677|gb|EAO30825.1| putative lipoprotein [Xylella fastidiosa Ann-1]
 gi|167965785|gb|ACA12795.1| putative lipoprotein [Xylella fastidiosa M12]
          Length = 293

 Score =  241 bits (617), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 65/264 (24%), Positives = 111/264 (42%), Gaps = 21/264 (7%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L          + G  R++ ++       D      +Y+KA   +K+ N++ A   F + 
Sbjct: 13  LLAMLLATFILITGCHRETKKNAD-----DGMPVEHLYDKAHTLMKKGNWAGAEVSFKRL 67

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +P+     ++++ +A+ QY +GK+  A S  + +I  YP   N+ Y+YYL G+S + 
Sbjct: 68  IAQYPYGPYTEQAMVENAYAQYKSGKHDDAVSSIDRFIRTYPTHHNIPYMYYLRGLSNSN 127

Query: 144 MI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
                            D  A +        +++RY NS Y   A+  +T  RN  A  E
Sbjct: 128 RDTIFLRKVWSLDLSRRDLSAPQQAYNDFKTVLDRYPNSRYAADAKKQMTELRNMFAQYE 187

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           + +  YYL+R  +VAA  R   +L  Y  +    +A+A L EAY  L     A     ++
Sbjct: 188 MNVTLYYLRRTAWVAAAGRANFLLETYPQSPFQYDAVAALGEAYTHLGNKTLADNARQVL 247

Query: 254 QERYPQ------GYWARYVETLVK 271
           Q   P         W +Y   + K
Sbjct: 248 QTNAPDHPWLKGKKWPKYPAAIRK 271


>gi|28199627|ref|NP_779941.1| hypothetical protein PD1756 [Xylella fastidiosa Temecula1]
 gi|28057742|gb|AAO29590.1| conserved hypothetical protein [Xylella fastidiosa Temecula1]
          Length = 298

 Score =  241 bits (617), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 65/264 (24%), Positives = 111/264 (42%), Gaps = 21/264 (7%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L          + G  R++ ++       D      +Y+KA   +K+ N++ A   F + 
Sbjct: 18  LLAVLLATFILITGCHRETKKNAD-----DGMPVEHLYDKAHTLMKKGNWAGAELSFKRL 72

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +P+     ++++ +A+ QY +GK+  A S  + +I  YP   N+ Y+YYL G+S + 
Sbjct: 73  IAQYPYGPYTEQAMVENAYAQYKSGKHDDAVSSIDRFIRTYPTHHNIPYMYYLRGLSNSN 132

Query: 144 MI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
                            D  A +        +++RY NS Y   A+  +T  RN  A  E
Sbjct: 133 RDTIFLRKVWSLDLSRRDLSAPQQAYNDFKTVLDRYPNSRYATDAKKQMTELRNMFAQYE 192

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           + +  YYL+R  +VAA  R   +L  Y  +    +A+A L EAY  L     A     ++
Sbjct: 193 MNVTLYYLRRTAWVAAAGRANFLLETYPQSPFQYDAVAALGEAYTHLGNKTLADNARQVL 252

Query: 254 QERYPQ------GYWARYVETLVK 271
           Q   P         W +Y   + K
Sbjct: 253 QTNAPDHPWLKGKKWPKYPAAIRK 276


>gi|262163885|ref|ZP_06031624.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio mimicus VM223]
 gi|262027413|gb|EEY46079.1| probable component of the lipoprotein assembly complex (forms a
           complex with YaeT YfgL and NlpB) [Vibrio mimicus VM223]
          Length = 214

 Score =  241 bits (617), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 46/211 (21%), Positives = 88/211 (41%), Gaps = 10/211 (4%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
              E+Y +A   L+   +  A E        +PF   + +  L   +  Y         +
Sbjct: 2   PPSELYSEAQSALQSGTWLTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLA 61

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLMLQYMSRI 165
             E +    P  + +D+V Y+ G+++    R+             D    K       ++
Sbjct: 62  TIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNVDRSDRDPEPVKSAFADFKKL 121

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           ++RY NSPY + A+  +   +N+LA  ++    +YL+R  ++AAI R Q +   + D E 
Sbjct: 122 LQRYPNSPYAEDAQRRMYALKNRLAEYDLATADFYLRREAWIAAINRTQELQKTFPDTEA 181

Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQER 256
           A +A+   +EAY  L + +       L++  
Sbjct: 182 ARKALDIQLEAYQQLGMTEAVERTEQLMKLN 212


>gi|149907609|ref|ZP_01896356.1| hypothetical protein PE36_06967 [Moritella sp. PE36]
 gi|149809279|gb|EDM69208.1| hypothetical protein PE36_06967 [Moritella sp. PE36]
          Length = 245

 Score =  241 bits (616), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 58/247 (23%), Positives = 98/247 (39%), Gaps = 16/247 (6%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
               L I  S+A+    G   ++  +V        +   E+Y  A   L+  NF  A E 
Sbjct: 3   KSIKLAISLSLALVMATGCSSKTEPNV------PDKPAIELYSIAQQSLQAGNFVSAIET 56

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
                  +PF     +  L   +  Y      QA +  + +I   P  K++DYVYY+ G+
Sbjct: 57  LEALDTRYPFGPHTVQVQLDLIYAYYKNSDTAQALANIDRFIRLNPSHKDIDYVYYMRGL 116

Query: 140 SYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
           +              I     D           +R+++RY  S YV  A+      +++L
Sbjct: 117 TNMGADYNLFHDLFNIDRSDRDPSYANAAFNDFTRLIKRYPQSEYVADAQKRAIAIKSRL 176

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           A  E+    YY+KR  Y+AAI R Q ++ N++D E    A+  +++AY  L         
Sbjct: 177 ARYELSAAEYYMKRKAYIAAIQRAQHIIDNFADTESRTGALKVMIKAYDILEQPTLKANA 236

Query: 250 VSLIQER 256
             ++   
Sbjct: 237 KKILAAN 243


>gi|182682371|ref|YP_001830531.1| competence lipoprotein [Xylella fastidiosa M23]
 gi|32130367|sp|Q87AR6|Y1756_XYLFT RecName: Full=UPF0169 lipoprotein PD_1756; Flags: Precursor
 gi|182632481|gb|ACB93257.1| competence lipoprotein [Xylella fastidiosa M23]
          Length = 293

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 65/264 (24%), Positives = 111/264 (42%), Gaps = 21/264 (7%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L          + G  R++ ++       D      +Y+KA   +K+ N++ A   F + 
Sbjct: 13  LLAVLLATFILITGCHRETKKNAD-----DGMPVEHLYDKAHTLMKKGNWAGAELSFKRL 67

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +P+     ++++ +A+ QY +GK+  A S  + +I  YP   N+ Y+YYL G+S + 
Sbjct: 68  IAQYPYGPYTEQAMVENAYAQYKSGKHDDAVSSIDRFIRTYPTHHNIPYMYYLRGLSNSN 127

Query: 144 MI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
                            D  A +        +++RY NS Y   A+  +T  RN  A  E
Sbjct: 128 RDTIFLRKVWSLDLSRRDLSAPQQAYNDFKTVLDRYPNSRYATDAKKQMTELRNMFAQYE 187

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           + +  YYL+R  +VAA  R   +L  Y  +    +A+A L EAY  L     A     ++
Sbjct: 188 MNVTLYYLRRTAWVAAAGRANFLLETYPQSPFQYDAVAALGEAYTHLGNKTLADNARQVL 247

Query: 254 QERYPQ------GYWARYVETLVK 271
           Q   P         W +Y   + K
Sbjct: 248 QTNAPDHPWLKGKKWPKYPAAIRK 271


>gi|71898900|ref|ZP_00681067.1| putative lipoprotein [Xylella fastidiosa Ann-1]
 gi|71731312|gb|EAO33376.1| putative lipoprotein [Xylella fastidiosa Ann-1]
          Length = 292

 Score =  240 bits (614), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 66/263 (25%), Positives = 112/263 (42%), Gaps = 20/263 (7%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L          + G  R++ ++       D      +Y+KA   +K+ N++ A   F + 
Sbjct: 13  LLAVLLATFILITGCHRETKKNAD-----DGMPVEHLYDKAHTLMKKGNWAGAEVSFKRL 67

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +P+     ++++ +A+ QY +GK+  A S  + +I  YP   N+ Y+YYL G+S + 
Sbjct: 68  IAQYPYGPYTEQAMVENAYAQYKSGKHDDAVSSIDRFIRTYPTHHNIPYMYYLRGLSNSN 127

Query: 144 MI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
                            D  A +        +++RY NS Y   A+  +T  RN  A  E
Sbjct: 128 RDTIFLRKVWSLDLSRRDLSAPQQAYNDFKTVLDRYPNSRYAADAKKQMTELRNMFAQYE 187

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           + +  YYL+R  +VAA  R   +L  Y  +    +A+A L EAY  L     A     ++
Sbjct: 188 MNVILYYLRRTAWVAAAGRANFLLETYPQSAFQYDAVAALGEAYTHLGNKTLADNARQVL 247

Query: 254 QERYPQ-----GYWARYVETLVK 271
           Q   P      G W +Y   + K
Sbjct: 248 QTNAPDHPWLKGKWPKYPAAIRK 270


>gi|254508946|ref|ZP_05121053.1| DNA uptake lipoprotein [Vibrio parahaemolyticus 16]
 gi|219548121|gb|EED25139.1| DNA uptake lipoprotein [Vibrio parahaemolyticus 16]
          Length = 214

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 47/211 (22%), Positives = 87/211 (41%), Gaps = 10/211 (4%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
              E+Y +A + L+  N+  A          +PF   + +  L   +  Y         +
Sbjct: 2   PPSELYSEAQVSLQSGNWLSAISQLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLA 61

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLMLQYMSRI 165
             E +    P  + +D+V Y+ G+++    R+             D    K       R+
Sbjct: 62  TIERFTRLNPTHEKLDWVLYMRGLTHMAQDRNFMHDLFNVDRSDRDPEPVKKAFADFKRL 121

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           +ERY  S Y + ++  +   +N+LA  ++    +YL+R  ++AAI R Q +   Y D   
Sbjct: 122 LERYPTSLYAEDSQKRMLALKNRLAEYDLATADFYLRREAWIAAINRTQELQKTYPDTVA 181

Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQER 256
           A +++   +EAY  L L D  +    LI+  
Sbjct: 182 ARKSLKIQLEAYKQLGLEDAIKRTEELIKLN 212


>gi|1246513|emb|CAA94434.1| unkown [Escherichia coli K-12]
          Length = 203

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 42/199 (21%), Positives = 84/199 (42%), Gaps = 10/199 (5%)

Query: 68  LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
           +++ N+ +A          +PF   +++  L   +  Y       A +  + +I   P  
Sbjct: 1   MQDGNWRQAITQLEALYNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTH 60

Query: 128 KNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKG 177
            N+DYV Y+ G++   +                D +  +      S++V  Y NS Y   
Sbjct: 61  PNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTD 120

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           A   +   +++LA  E  +  YY +RG +VA + R + +L +Y D +   +A+  +  AY
Sbjct: 121 ATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAY 180

Query: 238 VALALMDEAREVVSLIQER 256
             + +  +A +V  +I   
Sbjct: 181 RQMQMNAQAEKVAKIIAAN 199


>gi|307578654|gb|ADN62623.1| competence lipoprotein [Xylella fastidiosa subsp. fastidiosa GB514]
          Length = 293

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 65/264 (24%), Positives = 111/264 (42%), Gaps = 21/264 (7%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L          + G  R++ ++       D      +Y+KA   +K+ N++ A   F + 
Sbjct: 13  LLAVLLATFILITGCHRETKKNAD-----DGMPVEHLYDKAHXLMKKGNWAGAELSFKRL 67

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +P+     ++++ +A+ QY +GK+  A S  + +I  YP   N+ Y+YYL G+S + 
Sbjct: 68  IAQYPYGPYTEQAMVENAYAQYKSGKHDDAVSSIDRFIRTYPTHHNIPYMYYLRGLSNSN 127

Query: 144 MI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
                            D  A +        +++RY NS Y   A+  +T  RN  A  E
Sbjct: 128 RDTIFLRKVWSLDLSRRDLSAPQQAYNDFKTVLDRYPNSRYATDAKKQMTELRNMFAQYE 187

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           + +  YYL+R  +VAA  R   +L  Y  +    +A+A L EAY  L     A     ++
Sbjct: 188 MNVTLYYLRRTAWVAAAGRANFLLETYPQSPFQYDAVAALGEAYTHLGNKTLADNARQVL 247

Query: 254 QERYPQ------GYWARYVETLVK 271
           Q   P         W +Y   + K
Sbjct: 248 QTNAPDHPWLKGKKWPKYPAAIRK 271


>gi|254488543|ref|ZP_05101748.1| competence lipoprotein ComL [Roseobacter sp. GAI101]
 gi|214045412|gb|EEB86050.1| competence lipoprotein ComL [Roseobacter sp. GAI101]
          Length = 289

 Score =  240 bits (612), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 71/249 (28%), Positives = 129/249 (51%), Gaps = 1/249 (0%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
           A+ +  ++  C      R +        V  +     +++E+    L  +  ++A EYF+
Sbjct: 13  AVLVVAALGACGSQDTGRFTKSFFNPQEVPLETYSAEQIFERGEFELNRKRPAEAAEYFS 72

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
           +  R +P++  A+++L+M AF  +    Y  + S  + +I  +P+  +  Y  YL+ +SY
Sbjct: 73  EIERLYPYSEWAKRALIMQAFAFHQDQDYPNSRSAAQRFIDFFPDDDDAAYASYLLALSY 132

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
              I +V  DQ  T   LQ + +++E Y +S Y + A     +  + LA KE+E+GRYYL
Sbjct: 133 YDQIDEVGRDQGLTFQALQSLRQVIENYPDSEYARAAVLKFDLAFDHLAGKEMEVGRYYL 192

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +R  Y A+I RF++V+ ++    H  EA+ RLVEAY++L L +EA+   +++   Y    
Sbjct: 193 RRKHYTASINRFRVVVEDFQTTSHTAEALHRLVEAYLSLGLTNEAQTAGAILGYNYQSTE 252

Query: 262 WARYVETLV 270
           W      L+
Sbjct: 253 WYAASYALL 261


>gi|304309990|ref|YP_003809588.1| competence lipoprotein ComL [gamma proteobacterium HdN1]
 gi|301795723|emb|CBL43922.1| competence lipoprotein ComL [gamma proteobacterium HdN1]
          Length = 272

 Score =  239 bits (611), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 10/219 (4%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
            V +   +R+ YE A   LK++ FS+A E     +  +PF   A ++ L   +  Y +  
Sbjct: 21  KVENELSERQYYEDAQKALKDEQFSRAVERLEALNARYPFGRYAEQAQLDLVYAYYRSMD 80

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLML 159
           Y  +    E +I  +P+   +DY YY+ G+S   + R +            D    K   
Sbjct: 81  YASSGVTAERFIRMHPDHTELDYAYYMKGLSTYSVDRGIFERFIPSDYSERDLEPAKESF 140

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
              SR++ R+ NS Y   AR  +   RN  A  E++   + ++RG YVA+  R + V+ N
Sbjct: 141 NDFSRLLNRFPNSIYAPDARKRMVYLRNLFAEHELKAAHWNMRRGAYVASANRARYVVEN 200

Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           +       E +A L ++Y  L L D A + + ++   YP
Sbjct: 201 FDRTPAMAEGLAILYKSYRELGLNDLANDTLKVLVSNYP 239


>gi|294788952|ref|ZP_06754192.1| competence lipoprotein ComL [Simonsiella muelleri ATCC 29453]
 gi|294483054|gb|EFG30741.1| competence lipoprotein ComL [Simonsiella muelleri ATCC 29453]
          Length = 268

 Score =  239 bits (611), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 60/259 (23%), Positives = 107/259 (41%), Gaps = 13/259 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + KF   +F  + V  L G     S+      +T      ++Y +A   L   N+++A +
Sbjct: 1   MKKF---LFSVVVVAALSGCAANQSKISKDAQITQNWTADQLYSEARNELNSGNYTRATK 57

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            +       P      +SLL +A+ QY   + ++A      +   YP S+++DY  YL G
Sbjct: 58  LYELLRARQPEGRYIEQSLLDTAYAQYKNEEPEKALIALARFKQNYPASRDMDYALYLKG 117

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +      +              D  + +        +V++Y  S Y   A   +    + 
Sbjct: 118 LVLFAEEQSFLRKLASQDWADRDPASNRKAYYAFEELVKKYPTSKYAADATKRMAKLVDA 177

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           L   E+ I RYY KRG YVAA  R Q V+ N+ +    EE++A ++  Y  +     A +
Sbjct: 178 LGGHEIAIARYYAKRGAYVAANNRAQRVIENFQNTRFVEESLAIMIFTYKKMDKPRLAED 237

Query: 249 VVSLIQERYPQGYWARYVE 267
           V  ++Q  +P   + +   
Sbjct: 238 VRQVLQHNFPNSPYLQKGW 256


>gi|21243944|ref|NP_643526.1| competence lipoprotein [Xanthomonas axonopodis pv. citri str. 306]
 gi|78048899|ref|YP_365074.1| putative competence lipoprotein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|294625814|ref|ZP_06704431.1| competence lipoprotein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|294666974|ref|ZP_06732203.1| competence lipoprotein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|325929043|ref|ZP_08190198.1| outer membrane assembly lipoprotein YfiO [Xanthomonas perforans
           91-118]
 gi|21109554|gb|AAM38062.1| competence lipoprotein [Xanthomonas axonopodis pv. citri str. 306]
 gi|78037329|emb|CAJ25074.1| putative competence lipoprotein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|292599889|gb|EFF44009.1| competence lipoprotein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292603263|gb|EFF46685.1| competence lipoprotein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|325540576|gb|EGD12163.1| outer membrane assembly lipoprotein YfiO [Xanthomonas perforans
           91-118]
          Length = 293

 Score =  239 bits (611), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 62/264 (23%), Positives = 116/264 (43%), Gaps = 18/264 (6%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           A  I   + + F+V    + ++D   D         ++Y K    +++ N++ A   + +
Sbjct: 11  ARLIALMLVMAFVVTGCHRGAKDKNPDEG---MPVEQLYGKGHNLMEKGNWAGAEASYKR 67

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
               +P+     ++++ +A+ QY AGK+  A S  + +I  YP  +N+ Y+YYL G++ +
Sbjct: 68  LIAQYPYGPYTEQAMIETAYAQYKAGKHDDAVSSVDRFIRTYPTHRNISYLYYLRGLANS 127

Query: 143 QMI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
                             D  + +      + + +RY NS Y   AR  +   R+  A  
Sbjct: 128 NRDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAADARKRMIELRDIFAQH 187

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           E++   YYL+R  +V+A  R   +L  Y  +    +A+A L EAY  L     A +   +
Sbjct: 188 ELDNALYYLRRDAWVSAAGRANYLLETYPQSAFQYDAVAVLAEAYTHLGNKTLAADARRV 247

Query: 253 IQERYPQ-----GYWARYVETLVK 271
           ++   PQ     G W +Y   + K
Sbjct: 248 LELNDPQHPWLTGNWPKYPWAIRK 271


>gi|215919037|ref|NP_819783.2| competence lipoprotein ComL [Coxiella burnetii RSA 493]
 gi|206583922|gb|AAO90297.2| lipoprotein, ComL family [Coxiella burnetii RSA 493]
          Length = 272

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 10/235 (4%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           +DV        +   E++      L ++++S+A + F      +PF   A ++ L   + 
Sbjct: 37  KDVDPYQAYRGKTSAELFTSGERALAKKDYSEAVKNFEALDAIYPFGPHAEQAQLDIIYA 96

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQR 153
            Y       A +  + YI  YP  +NVDY YY+ G+    +          +  V  D  
Sbjct: 97  YYKNNDTSSAIAAADRYIRLYPRGRNVDYAYYMRGVISFDLGLSWLQKLARVSPVSRDVS 156

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
             +      + + E + +S Y   A   +   RN +A +E+ I  +Y+KR  YVAA  R 
Sbjct: 157 TLQQSFTSFATLAEVFPHSRYTPDALTRMRYIRNLMAQREIMIAEFYMKRRAYVAAANRG 216

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
             V+ ++  +    +A+A +V+AY AL L   A     L+Q  YP    AR +  
Sbjct: 217 SYVVQHFQGSPQVAKALAIMVQAYRALGLPKMADASNHLLQTNYPHTLEARKLRK 271


>gi|121604766|ref|YP_982095.1| hypothetical protein Pnap_1864 [Polaromonas naphthalenivorans CJ2]
 gi|120593735|gb|ABM37174.1| putative transmembrane protein [Polaromonas naphthalenivorans CJ2]
          Length = 274

 Score =  238 bits (609), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 60/232 (25%), Positives = 97/232 (41%), Gaps = 10/232 (4%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
                      T      ++Y +A        + KA   + +         +A+++ L  
Sbjct: 27  SGCSSTPAPDKTATWSPNKIYAEAKDEAGSGAYDKAIPLYEKLEGRAAGTPLAQQAQLDK 86

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PY 150
           A+ QY  G+  QA +    ++  +P S  +DY  YL G+        +            
Sbjct: 87  AYAQYKGGEQAQALATLNRFMKLHPASPAMDYALYLKGLVNFNDNLGIFGSISRQDLSER 146

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
           DQ A K   +    +V R+ +S Y   AR  +    N LA  EV + RYY  RG YVAAI
Sbjct: 147 DQNAAKESFESFKELVARFPDSRYAPDARLRMNYIVNSLAKSEVHVARYYYSRGAYVAAI 206

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
            R Q  +A+Y D    EEA   L ++Y AL + +   ++  ++ + YPQ  +
Sbjct: 207 NRAQSAIADYRDVPALEEATFILYKSYDALGMTELRDDMRRIMDKSYPQSQY 258


>gi|15837540|ref|NP_298228.1| hypothetical protein XF0938 [Xylella fastidiosa 9a5c]
 gi|9105861|gb|AAF83748.1|AE003932_12 conserved hypothetical protein [Xylella fastidiosa 9a5c]
          Length = 297

 Score =  238 bits (609), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 66/263 (25%), Positives = 112/263 (42%), Gaps = 20/263 (7%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L          + G  R++ ++       D      +Y+KA   +K+ N++ A   F + 
Sbjct: 18  LLAMLLATFVLITGCHREAKKNAD-----DGMPVEHLYDKAHTLMKKGNWAGAEVSFKRL 72

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +P+     ++++ +A+ QY +GK+  A S  + +I  YP   N+ Y+YYL G+S + 
Sbjct: 73  IAQYPYGPYTEQAMVENAYAQYKSGKHDDAVSSIDRFIRTYPTHHNIPYLYYLRGLSNSN 132

Query: 144 MI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
                            D  A +        +++RY NS Y   A+  +T  RN  A  E
Sbjct: 133 RDTIFLRKVWSLDLSRRDLSAPQQAYNDFKTVLDRYPNSRYAADAKKQMTELRNMFAQYE 192

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           + +  YYL+R  +VAA  R   +L  Y  +    +A+A L EAY  L     A     ++
Sbjct: 193 MNVTLYYLRRTAWVAAAGRANFLLETYPQSAFQYDAVAALGEAYTHLGNKTLADNARQVL 252

Query: 254 QERYPQ-----GYWARYVETLVK 271
           Q   P      G W +Y   + K
Sbjct: 253 QTNAPDHPWLKGKWPKYPAAIRK 275


>gi|21232519|ref|NP_638436.1| competence lipoprotein [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66767397|ref|YP_242159.1| competence lipoprotein [Xanthomonas campestris pv. campestris str.
           8004]
 gi|188990498|ref|YP_001902508.1| putative outer membrane lipoprotein [Xanthomonas campestris pv.
           campestris str. B100]
 gi|21114310|gb|AAM42360.1| competence lipoprotein [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66572729|gb|AAY48139.1| competence lipoprotein [Xanthomonas campestris pv. campestris str.
           8004]
 gi|167732258|emb|CAP50450.1| putative outer membrane lipoprotein [Xanthomonas campestris pv.
           campestris]
          Length = 293

 Score =  238 bits (608), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 61/264 (23%), Positives = 115/264 (43%), Gaps = 18/264 (6%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           A  I   + + F+V    + ++D   D         ++Y K    +++ N++ A   + +
Sbjct: 11  ARLIALMLVMAFVVTGCHRGAKDKNPDEG---MPVEQLYGKGHGLMEKGNWAGAEASYKR 67

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
               +P+     ++++ +A+ QY AGK+    S  + +I  YP  +N+ Y+YYL G++ +
Sbjct: 68  LIAQYPYGPYTEQAMIETAYAQYKAGKHDDTVSSVDRFIRTYPTHRNISYLYYLRGLANS 127

Query: 143 QMI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
                             D  + +      + + +RY NS Y   AR  +   R+  A  
Sbjct: 128 NRDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAPDARKRMIELRDIFAQH 187

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           E++   YYL+R  +V+A  R   +L  Y  +    +A+A L EAY  L     A +   +
Sbjct: 188 ELDNALYYLRRDAWVSAAGRANYLLETYPQSAFQYDAVAVLAEAYTHLGNKTLAADARRV 247

Query: 253 IQERYPQ-----GYWARYVETLVK 271
           ++   PQ     G W +Y   + K
Sbjct: 248 LELNSPQHPWLTGDWPKYPWAVRK 271


>gi|209363886|ref|YP_001424166.2| lipoprotein, ComL family [Coxiella burnetii Dugway 5J108-111]
 gi|212218243|ref|YP_002305030.1| lipoprotein, ComL family [Coxiella burnetii CbuK_Q154]
 gi|207081819|gb|ABS77330.2| lipoprotein, ComL family [Coxiella burnetii Dugway 5J108-111]
 gi|212012505|gb|ACJ19885.1| lipoprotein, ComL family [Coxiella burnetii CbuK_Q154]
          Length = 272

 Score =  238 bits (608), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 10/235 (4%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           +DV        +   E++      L ++++S+A + F      +PF   A ++ L   + 
Sbjct: 37  KDVDPYQAYRGKTSAELFTSGERALAKKDYSEAVKNFEALDAIYPFGPHAEQAQLDIIYA 96

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQR 153
            Y       A +  + YI  YP  +NVDY YY+ G+    +          +  V  D  
Sbjct: 97  YYKNNDTSSAIAAADRYIRLYPRGRNVDYAYYMRGVIGFDLGLSWLQKLARVSPVSRDVS 156

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
             +      + + E + +S Y   A   +   RN +A +E+ I  +Y+KR  YVAA  R 
Sbjct: 157 TLQQSFTSFATLAEVFPHSRYTPDALTRMRYIRNLMAQREIMIAEFYMKRRAYVAAANRG 216

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
             V+ ++  +    +A+A +V+AY AL L   A     L+Q  YP    AR +  
Sbjct: 217 SYVVQHFQGSPQVAKALAIMVQAYRALGLPKMADASNHLLQTNYPHTLEARKLRK 271


>gi|261867119|ref|YP_003255041.1| lipoprotein [Aggregatibacter actinomycetemcomitans D11S-1]
 gi|261412451|gb|ACX81822.1| lipoprotein [Aggregatibacter actinomycetemcomitans D11S-1]
          Length = 262

 Score =  238 bits (608), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 62/251 (24%), Positives = 109/251 (43%), Gaps = 20/251 (7%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
             +L  FAL    ++AV         S +DV      +   ++ +Y     +L++ ++S+
Sbjct: 1   MRKLKSFALLTAMALAVTAC----SSSKQDV------EQAPEQTLYTTGQTYLQDGDYSQ 50

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A  YFN  S  FP +    +  L   +  Y +  Y +     + +I +YP S ++DY  Y
Sbjct: 51  AIRYFNAVSNRFPGSSYGEQVQLNLIYAYYKSQDYSETLLTIDRFIQRYPNSSHLDYALY 110

Query: 136 LVGMSYAQMIRDVPYD----QRATKL------MLQYMSRIVERYTNSPYVKGARFYVTVG 185
           + G++ + +  +   D     RAT+              +V  + NSPY   A   +T  
Sbjct: 111 MAGLTNSALGDNFFQDFFGVDRATRENTSIKTAFANFQNLVNHFPNSPYTPDALARMTYI 170

Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
           +  LA  E+EI ++Y KR  YVA   R   +L  Y D +   +A+  + E+Y  + L   
Sbjct: 171 KASLARHELEIAKFYFKRDAYVATANRVVSMLKLYPDTQATLDALPLMKESYEKMNLKHL 230

Query: 246 AREVVSLIQER 256
           A +   +I   
Sbjct: 231 ADQTAKVIAAN 241



 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 28/70 (40%)

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           G+ YL+ G+Y  AI  F  V   +  + + E+    L+ AY       E    +    +R
Sbjct: 39  GQTYLQDGDYSQAIRYFNAVSNRFPGSSYGEQVQLNLIYAYYKSQDYSETLLTIDRFIQR 98

Query: 257 YPQGYWARYV 266
           YP      Y 
Sbjct: 99  YPNSSHLDYA 108


>gi|325916248|ref|ZP_08178529.1| outer membrane assembly lipoprotein YfiO [Xanthomonas vesicatoria
           ATCC 35937]
 gi|325537542|gb|EGD09257.1| outer membrane assembly lipoprotein YfiO [Xanthomonas vesicatoria
           ATCC 35937]
          Length = 293

 Score =  238 bits (607), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 61/264 (23%), Positives = 116/264 (43%), Gaps = 18/264 (6%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           A  I   + + F+V    + ++D   D         ++Y K    +++ N++ A   + +
Sbjct: 11  ARLIALMLVMAFVVTGCHRGAKDKNPDEG---MPVEQLYGKGHGLMEKGNWAGAEASYKR 67

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
               +P+     ++++ +A+ QY AGK+    S  + +I  YP  +N+ Y+YYL G++ +
Sbjct: 68  LIAQYPYGPYTEQAMIETAYAQYKAGKHDDTVSSVDRFIRTYPTHRNISYLYYLRGLANS 127

Query: 143 QMI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
                             D  + +      + + +RY NS Y   AR  +   R+  A  
Sbjct: 128 NRDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAPDARKRMIELRDVFAQH 187

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           E++   YYL+R  +V+A  R   +L  Y  + +  +A+A L EAY  L     A +   +
Sbjct: 188 ELDNALYYLRRNAWVSAAGRANYLLETYPQSAYQYDAVAVLAEAYTHLGNKTLAADARRV 247

Query: 253 IQERYPQ-----GYWARYVETLVK 271
           ++   PQ     G W +Y   + K
Sbjct: 248 LELNSPQHPWLTGNWPKYPWAIRK 271


>gi|18203349|sp|Q9PEU0|Y938_XYLFA RecName: Full=UPF0169 lipoprotein XF_0938; Flags: Precursor
          Length = 292

 Score =  238 bits (607), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 66/263 (25%), Positives = 112/263 (42%), Gaps = 20/263 (7%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L          + G  R++ ++       D      +Y+KA   +K+ N++ A   F + 
Sbjct: 13  LLAMLLATFVLITGCHREAKKNAD-----DGMPVEHLYDKAHTLMKKGNWAGAEVSFKRL 67

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +P+     ++++ +A+ QY +GK+  A S  + +I  YP   N+ Y+YYL G+S + 
Sbjct: 68  IAQYPYGPYTEQAMVENAYAQYKSGKHDDAVSSIDRFIRTYPTHHNIPYLYYLRGLSNSN 127

Query: 144 MI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
                            D  A +        +++RY NS Y   A+  +T  RN  A  E
Sbjct: 128 RDTIFLRKVWSLDLSRRDLSAPQQAYNDFKTVLDRYPNSRYAADAKKQMTELRNMFAQYE 187

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           + +  YYL+R  +VAA  R   +L  Y  +    +A+A L EAY  L     A     ++
Sbjct: 188 MNVTLYYLRRTAWVAAAGRANFLLETYPQSAFQYDAVAALGEAYTHLGNKTLADNARQVL 247

Query: 254 QERYPQ-----GYWARYVETLVK 271
           Q   P      G W +Y   + K
Sbjct: 248 QTNAPDHPWLKGKWPKYPAAIRK 270


>gi|332535271|ref|ZP_08411073.1| putative component of the lipoprotein assembly complex
           [Pseudoalteromonas haloplanktis ANT/505]
 gi|332035302|gb|EGI71806.1| putative component of the lipoprotein assembly complex
           [Pseudoalteromonas haloplanktis ANT/505]
          Length = 254

 Score =  238 bits (607), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 52/249 (20%), Positives = 111/249 (44%), Gaps = 12/249 (4%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           ++ K A  I FS++V  L        ++         +    +YE A   L    +++A 
Sbjct: 4   KIGKRAFAIVFSVSVLSLGACSSAPDQEDIQRVP--NKSAHALYEDAKETLDSGLYARAI 61

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           E  +     +PF   +++  +   +  Y +G  +QA +  + +I   P  K++DY+YY+ 
Sbjct: 62  ELLSAIDSRYPFGPFSKQVQMDLVYAHYQSGNTEQALATIDRFIRLNPNHKDLDYMYYMR 121

Query: 138 GMSYAQMIRD----------VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           G+   +  ++             D   T++    +S +V+R+  S Y   A+  +    N
Sbjct: 122 GLVNIKADKNAFQEYFGVDRADRDANRTRVAFTDLSTLVKRFPKSDYAPEAKRRLVWLLN 181

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
           ++A  E+++  YY +R  Y+AA  R + V+ +YS + + + A+  + ++Y  L L + + 
Sbjct: 182 RMARYELKVATYYYEREAYLAAANRGKFVVEHYSQSSYLDPALEMMEKSYDQLGLTELSE 241

Query: 248 EVVSLIQER 256
                 +  
Sbjct: 242 HAKQTRKLN 250


>gi|160898939|ref|YP_001564521.1| putative transmembrane protein [Delftia acidovorans SPH-1]
 gi|160364523|gb|ABX36136.1| putative transmembrane protein [Delftia acidovorans SPH-1]
          Length = 263

 Score =  237 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 64/242 (26%), Positives = 95/242 (39%), Gaps = 11/242 (4%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           I  SI    LV     +      D  T       +Y +A        F KA   F +   
Sbjct: 4   IPLSIVPAMLVAGVLTACSSTQQD-PTAKWTPDRIYTEARDEAASGAFDKAVPLFEKLEG 62

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-- 143
                 +A+++ L  A+ QY +G   QA +  + ++  +P S   DY  YL G+      
Sbjct: 63  RAAGTPLAQQAQLDKAYAQYKSGDKIQATATLDRFLKLHPASPATDYALYLKGLVNFNDN 122

Query: 144 --------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
                          DQ+A K   +    +V R+  S Y + +R  +    N LA  EV 
Sbjct: 123 LGMFSWLSRQDLSERDQKAAKDSFESFRELVTRFPESRYAEDSRLRMQYIVNSLAQYEVH 182

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           + RYY  RG YVAAI R Q  + +Y       EAM  LV +Y AL +     +   ++  
Sbjct: 183 VARYYYGRGAYVAAIARAQTAVKDYQGVPAVREAMQILVNSYDALGMTQLRDDAQRVLTA 242

Query: 256 RY 257
            Y
Sbjct: 243 SY 244


>gi|293390712|ref|ZP_06635046.1| lipoprotein [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290951246|gb|EFE01365.1| lipoprotein [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 262

 Score =  237 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 62/251 (24%), Positives = 109/251 (43%), Gaps = 20/251 (7%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
             +L  FAL    ++AV         S +DV      +   ++ +Y     +L++ ++S+
Sbjct: 1   MRKLKSFALLTAMALAVTAC----SSSKQDV------EQAPEQTLYTTGQTYLQDGDYSQ 50

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A  YFN  S  FP +    +  L   +  Y +  Y +     + +I +YP S ++DY  Y
Sbjct: 51  AIRYFNAVSNRFPGSSYGEQVQLNLIYAYYKSQDYNETLLTIDRFIQRYPNSSHLDYALY 110

Query: 136 LVGMSYAQMIRDVPYD----QRATKL------MLQYMSRIVERYTNSPYVKGARFYVTVG 185
           + G++ + +  +   D     RAT+              +V  + NSPY   A   +T  
Sbjct: 111 MAGLTNSALGDNFFQDFFGVDRATRENTSIKTAFANFQNLVNHFPNSPYTPDALARMTYI 170

Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
           +  LA  E+EI ++Y KR  YVA   R   +L  Y D +   +A+  + E+Y  + L   
Sbjct: 171 KASLARHELEIAKFYFKRDAYVATANRVVSMLKLYPDTQATLDALPLMKESYEKMNLKHL 230

Query: 246 AREVVSLIQER 256
           A +   +I   
Sbjct: 231 ADQTAQVIAAN 241



 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 29/70 (41%)

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           G+ YL+ G+Y  AI  F  V   +  + + E+    L+ AY      +E    +    +R
Sbjct: 39  GQTYLQDGDYSQAIRYFNAVSNRFPGSSYGEQVQLNLIYAYYKSQDYNETLLTIDRFIQR 98

Query: 257 YPQGYWARYV 266
           YP      Y 
Sbjct: 99  YPNSSHLDYA 108


>gi|289662939|ref|ZP_06484520.1| putative competence lipoprotein [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 293

 Score =  237 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 62/264 (23%), Positives = 116/264 (43%), Gaps = 18/264 (6%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           A  I   + + F+V    + ++D   D         ++Y K    +++ N++ A   + +
Sbjct: 11  ARLIALMLVMAFVVTGCHRGAKDKNPDEG---MPVEQLYGKGHDLMEKGNWAGAEASYKR 67

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
               +P+     ++++ SA+ QY AGK+    S  + +I  YP  +N+ Y+YYL G++ +
Sbjct: 68  LIAQYPYGPYTEQAMIESAYAQYKAGKHDDTVSSVDRFIRTYPTHRNISYLYYLRGLANS 127

Query: 143 QMI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
                             D  + +      + + +RY NS Y   AR  +   R+  A  
Sbjct: 128 NRDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAADARKRMIELRDVFAQH 187

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           E++   YYL+R  +V+A  R   +L  Y  + +  +A+A L EAY  L     A +   +
Sbjct: 188 ELDNALYYLRRDAWVSAAGRANYLLETYPQSAYQYDAVAVLAEAYTHLGNKTLAADARRV 247

Query: 253 IQERYPQ-----GYWARYVETLVK 271
           ++   PQ     G W +Y   + K
Sbjct: 248 LELNDPQHPWLTGNWPKYPWAIRK 271


>gi|255019803|ref|ZP_05291879.1| Probable component of the lipoprotein assembly complex (forms a
           complex with YaeT, YfgL, and NlpB) [Acidithiobacillus
           caldus ATCC 51756]
 gi|254970732|gb|EET28218.1| Probable component of the lipoprotein assembly complex (forms a
           complex with YaeT, YfgL, and NlpB) [Acidithiobacillus
           caldus ATCC 51756]
          Length = 249

 Score =  237 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 61/242 (25%), Positives = 112/242 (46%), Gaps = 2/242 (0%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVR--YQREVYEKAVLFLKEQNFSKAYEYFNQ 82
            IF  +A   L+G     + D   DS+ +        +Y  A       ++S A   + +
Sbjct: 5   IIFPIVAHLTLLGVLSGCASDGAKDSLKESSHLSAAAMYRPAKAAQDRGDYSSAVRLYEE 64

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
               +P+   A ++ L +A+  Y  G  + AA+  E +I  +P +  VDY +YL G++Y 
Sbjct: 65  LETRYPYGPYAEQAQLNTAYCYYKQGDSEAAAAAAERFIKLHPVNPFVDYAWYLKGIAYY 124

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
           Q I+   ++ +  +     +  +V+R+ NS Y   AR  +    + L  +E++I ++Y  
Sbjct: 125 QAIQGAQWNPKPLEESFATLETLVKRWPNSAYAADARLRMEKIIDILGQRELDICKFYYI 184

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           R  YVAA  R   V+  Y  +   EEA+  L  +Y  + L   A+    +++  YPQ  +
Sbjct: 185 RHAYVAAANRCNDVVTRYQLSPAREEALYYLSLSYRHMNLDGLAKTTAGVLKANYPQSKY 244

Query: 263 AR 264
            +
Sbjct: 245 LK 246


>gi|90408472|ref|ZP_01216631.1| hypothetical protein PCNPT3_03216 [Psychromonas sp. CNPT3]
 gi|90310404|gb|EAS38530.1| hypothetical protein PCNPT3_03216 [Psychromonas sp. CNPT3]
          Length = 241

 Score =  237 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 51/240 (21%), Positives = 108/240 (45%), Gaps = 14/240 (5%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
           V F+       +    ++     +    +Y+ A   L+  N+ KA E        +PF  
Sbjct: 3   VLFISSCSSSKTEKPKVED----KPPSVLYQDAKAQLQAANYEKASEILEALDSRYPFGP 58

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS-------YAQM 144
            + +  L   +  Y   +   A +  + ++   P   ++DY+YY+ G++       + Q 
Sbjct: 59  HSDQVQLDLIYSYYKRDESALALANIDRFMRLNPTHPDLDYLYYMRGLTQIAADQEFFQS 118

Query: 145 ---IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
              I     D        +  S++V+ Y  S Y   A+ ++   +++LA  E+ I ++Y 
Sbjct: 119 LFNIERFDRDPSHALQAFKDFSQLVKFYPKSQYAADAQLHLIDIKSRLARYELSIAKWYF 178

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           KR  Y+A+I R +++L NY D++  E+A+  +++ Y  L L+      +++++  YP+  
Sbjct: 179 KREAYIASINRTKIILNNYPDSDSIEDALVLMIKGYERLNLVTPKTNALAILKMNYPKNR 238


>gi|289667067|ref|ZP_06488142.1| putative competence lipoprotein [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 293

 Score =  237 bits (605), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 62/264 (23%), Positives = 116/264 (43%), Gaps = 18/264 (6%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           A  I   + + F+V    + ++D   D         ++Y K    +++ N++ A   + +
Sbjct: 11  ARLIALMLVMAFVVTGCHRGAKDKNPDEG---MPVEQLYGKGHDLMEKGNWAGAEASYKR 67

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
               +P+     ++++ SA+ QY AGK+    S  + +I  YP  +N+ Y+YYL G++ +
Sbjct: 68  LIAQYPYGPYTEQAMIESAYAQYKAGKHDDTVSSVDRFIRTYPTHRNISYLYYLRGLANS 127

Query: 143 QMI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
                             D  + +      + + +RY NS Y   AR  +   R+  A  
Sbjct: 128 NRDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAADARKRMIELRDVFAQH 187

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           E++   YYL+R  +V+A  R   +L  Y  + +  +A+A L EAY  L     A +   +
Sbjct: 188 ELDNALYYLRRDAWVSAAGRANYLLETYPQSAYQYDAVAMLAEAYTHLGNKTLAADARRV 247

Query: 253 IQERYPQ-----GYWARYVETLVK 271
           ++   PQ     G W +Y   + K
Sbjct: 248 LELNDPQHPWLTGNWPKYPWAIRK 271


>gi|121611397|ref|YP_999204.1| hypothetical protein Veis_4485 [Verminephrobacter eiseniae EF01-2]
 gi|121556037|gb|ABM60186.1| putative transmembrane protein [Verminephrobacter eiseniae EF01-2]
          Length = 265

 Score =  237 bits (605), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 56/224 (25%), Positives = 97/224 (43%), Gaps = 10/224 (4%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           +  T       +  +A   +    + KA     +         +A+++ +  A+  Y +G
Sbjct: 26  EDRTAGWSTERIRAEAQDEMSSGAYDKAVPLLEKLEGRAAGTPLAQQAQIDKAYAHYKSG 85

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ----------MIRDVPYDQRATKLM 158
           +  QA +  + ++  +P S  +DY  YL G++                    DQ+A K  
Sbjct: 86  EKAQAVATLDRFMKLHPVSPALDYALYLKGLANFNDNLGLFSFISREDLSERDQQAAKDS 145

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
            +    +V R+  S Y + AR  +T   N LA  EV + RYY   G YVAAI R  L L+
Sbjct: 146 FEAFRELVNRFPQSRYAQDARQRMTYIVNSLAQYEVHVARYYYLHGAYVAAIGRAHLALS 205

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           +Y      EEA+  L+++Y AL +     +   ++ + YPQ  +
Sbjct: 206 DYQGVPAQEEALYILIQSYDALGMTALRDDARRVMDKSYPQSSF 249


>gi|261856620|ref|YP_003263903.1| outer membrane assembly lipoprotein YfiO [Halothiobacillus
           neapolitanus c2]
 gi|261837089|gb|ACX96856.1| outer membrane assembly lipoprotein YfiO [Halothiobacillus
           neapolitanus c2]
          Length = 273

 Score =  237 bits (605), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 60/247 (24%), Positives = 104/247 (42%), Gaps = 12/247 (4%)

Query: 21  KFALTIFFSIAVCFLVGWE--RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           K    I  + A+    G     ++S     +         ++Y++A   ++  ++  A +
Sbjct: 15  KLYSGILLAAAIGLTSGCSWFSKNSDQDQAELADPTVSAAQLYDEASSAMRRDDYGTAIK 74

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            F      +PF     ++ L  A+  Y   +   A +  + YI  +P+ KNVDY  Y+ G
Sbjct: 75  KFETLEGRYPFGAYTEQAQLEVAYAYYKYNEPDSAIAAADRYIQIHPQGKNVDYALYIKG 134

Query: 139 MSYAQMIRDVP----------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +S       +            DQ          S +V R+ +S YV  A   +   RN 
Sbjct: 135 LSNMDRGDSLINKIAKPNLAYRDQSILHNAYAAFSELVTRFPDSKYVDDASVRLIKIRND 194

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E+ + RYY+KRG ++AA  R Q  L+ Y+ +     A+  L+ AY  L L  EA +
Sbjct: 195 LAEHEIYVARYYMKRGAWLAAANRAQTALSKYNGSTSTIPALEILISAYKKLGLKTEAAD 254

Query: 249 VVSLIQE 255
              +++ 
Sbjct: 255 AEQILKA 261


>gi|58581219|ref|YP_200235.1| competence lipoprotein [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84623137|ref|YP_450509.1| competence lipoprotein [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|58425813|gb|AAW74850.1| competence lipoprotein [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84367077|dbj|BAE68235.1| competence lipoprotein [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 293

 Score =  236 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 63/264 (23%), Positives = 116/264 (43%), Gaps = 18/264 (6%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           A  I   + + F+V    + ++D   D         ++Y KA   +++ N++ A   F  
Sbjct: 11  ARLIALMLVMAFVVTGCHRGAKDKNPDEG---MPVEQLYGKAHNLMEKGNWAGAEASFKH 67

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
               +P+     ++++ SA+ QY AGK+    S  + +I  YP  +N+ Y+YYL G++ +
Sbjct: 68  LIAQYPYGPYTEQAMIESAYAQYKAGKHDDTVSSVDRFIRTYPTHRNIAYLYYLRGLANS 127

Query: 143 QMI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
                             D  + +      + + +RY NS Y   AR  +   R+  A  
Sbjct: 128 NRDTVFLRHVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAADARKRMIELRDVFAQH 187

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           E++   YYL+R  +V+A  R   +L  Y  + +  +A+A L EAY  L     A +   +
Sbjct: 188 ELDNALYYLRRDAWVSAAGRANYLLETYPQSAYQYDAVAVLAEAYTHLGNKTLAADARRV 247

Query: 253 IQERYPQ-----GYWARYVETLVK 271
           ++   P+     G W +Y   + K
Sbjct: 248 LELNDPKHPWLTGNWPKYPLVIRK 271


>gi|332525785|ref|ZP_08401929.1| hypothetical protein RBXJA2T_08043 [Rubrivivax benzoatilyticus JA2]
 gi|332109339|gb|EGJ10262.1| hypothetical protein RBXJA2T_08043 [Rubrivivax benzoatilyticus JA2]
          Length = 253

 Score =  236 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 59/241 (24%), Positives = 104/241 (43%), Gaps = 16/241 (6%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
              L G    +  +             ++Y  A   ++  ++  A +  ++         
Sbjct: 3   ATLLAGCGSTTKEER------ADVAAEKLYADAKDNMEAGSYEPAIKALSRVEGLAAGTV 56

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-------- 143
           +A++S +  A++ +  G+  QA +  E +I   P S  +DY  YL G+            
Sbjct: 57  LAQQSQIDLAYLYWKTGERAQALTTIERFIRLNPSSPALDYAMYLRGLINFNEDMGLFGR 116

Query: 144 --MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
                    DQRA +   Q   ++VE++  S Y   A+  +    N LAA EV + RYY 
Sbjct: 117 IARQDLSERDQRAARDAYQAFKQLVEQFPQSRYTPDAKLRMDYIVNSLAAYEVHVARYYF 176

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           KRG YVAA  R Q  +A +  +  AEE +  +V++Y  L L+    + + ++Q+ YP   
Sbjct: 177 KRGAYVAAANRAQQAVAEFQRSPAAEEGLFLMVQSYDRLQLVQLRDDALRVLQKNYPDSR 236

Query: 262 W 262
           +
Sbjct: 237 F 237



 Score = 39.7 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 42/120 (35%), Gaps = 22/120 (18%)

Query: 75  KAYEYFNQCSRDFPFAGVARKSLLMSAFV--------------QYSAGKYQQAASLGEEY 120
            AY+ F Q    FP +     + L   ++               +  G Y  AA+  ++ 
Sbjct: 132 DAYQAFKQLVEQFPQSRYTPDAKLRMDYIVNSLAAYEVHVARYYFKRGAYVAAANRAQQA 191

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           + ++  S   +   +L+  SY ++      D          +  + + Y +S ++  A  
Sbjct: 192 VAEFQRSPAAEEGLFLMVQSYDRLQLVQLRD--------DALRVLQKNYPDSRFLAQAIE 243


>gi|251793937|ref|YP_003008669.1| lipoprotein [Aggregatibacter aphrophilus NJ8700]
 gi|247535336|gb|ACS98582.1| lipoprotein [Aggregatibacter aphrophilus NJ8700]
          Length = 264

 Score =  236 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 58/251 (23%), Positives = 109/251 (43%), Gaps = 20/251 (7%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
             +L  FAL    ++AV    G    S +DV      +   ++ +Y     +L+E ++S+
Sbjct: 1   MRKLKSFALLTAMALAVTACSG----SKQDV------EQAPEQTLYSIGQNYLQEGDYSQ 50

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A  Y    +  FP +  + +  L   +  Y +  Y +     + +I ++P S ++DY  Y
Sbjct: 51  AIRYLTAVNNRFPGSSYSEQVQLNLIYAYYKSQDYTETLVTVDRFIQRFPNSNHLDYALY 110

Query: 136 LVGMSYAQMIRDVPYD----QRATKL------MLQYMSRIVERYTNSPYVKGARFYVTVG 185
           + G++ + +  +   D     RAT+              +V+ + NSPY   A   +   
Sbjct: 111 MAGLTNSALGDNFFQDFFGVDRATRENTSIKTAFANFQTLVQHFPNSPYTPDALARMAYI 170

Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
           +  LA  E++I ++Y KR  YVA   R   +L  Y D +   +A+  + E+Y  + L   
Sbjct: 171 KASLARHELDIAKFYFKRDAYVATANRVVSMLKLYPDTQATLDALPLMKESYERMNLKQL 230

Query: 246 AREVVSLIQER 256
           A +   +I   
Sbjct: 231 ADQTARIIAAN 241



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 29/73 (39%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
             IG+ YL+ G+Y  AI     V   +  + ++E+    L+ AY       E    V   
Sbjct: 36  YSIGQNYLQEGDYSQAIRYLTAVNNRFPGSSYSEQVQLNLIYAYYKSQDYTETLVTVDRF 95

Query: 254 QERYPQGYWARYV 266
            +R+P      Y 
Sbjct: 96  IQRFPNSNHLDYA 108


>gi|166713129|ref|ZP_02244336.1| competence lipoprotein [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 293

 Score =  236 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 63/264 (23%), Positives = 117/264 (44%), Gaps = 18/264 (6%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           A  I   + + F+V    + ++D   D         ++Y KA   +++ N++ A   F +
Sbjct: 11  ARLIALMLVMAFVVTGCHRGAKDKNPDEG---MPVEQLYGKAHNLMEKGNWAGAEASFKR 67

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
               +P+     ++++ SA+ QY AGK+    S  + +I  YP  +N+ Y+YYL G++ +
Sbjct: 68  LIAQYPYGPYTEQAMIESAYAQYKAGKHDDTVSSVDRFIRTYPTHRNIAYLYYLRGLANS 127

Query: 143 QMI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
                             D  + +      + + +RY NS Y   AR  +   R+  A  
Sbjct: 128 NRDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAADARKRMIELRDVFAQH 187

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           E++   YYL+R  +V+A  R   +L  Y  + +  +A+A L EAY  L     A +   +
Sbjct: 188 ELDDALYYLRRDAWVSAAGRANYLLETYPQSAYQYDAVAVLAEAYTHLGNKTLAADARRV 247

Query: 253 IQERYPQ-----GYWARYVETLVK 271
           ++   P+     G W +Y   + K
Sbjct: 248 LELNDPKHPWLTGNWPKYPLVIRK 271


>gi|161830296|ref|YP_001596931.1| competence lipoprotein ComL [Coxiella burnetii RSA 331]
 gi|161762163|gb|ABX77805.1| competence lipoprotein ComL [Coxiella burnetii RSA 331]
          Length = 255

 Score =  236 bits (602), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 10/235 (4%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           +DV        +   E++      L ++++S+A + F      +PF   A ++ L   + 
Sbjct: 20  KDVDPYQAYRGKTSAELFTSGERALAKKDYSEAVKNFEALDAIYPFGPHAEQAQLDIIYA 79

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQR 153
            Y       A +  + YI  YP  +NVDY YY+ G+    +          +  V  D  
Sbjct: 80  YYKNNDTSSAIAAADRYIRLYPRGRNVDYAYYMRGVISFDLGLSWLQKLARVSPVSRDVS 139

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
             +      + + E + +S Y   A   +   RN +A +E+ I  +Y+KR  YVAA  R 
Sbjct: 140 TLQQSFTSFATLAEVFPHSRYTPDALTRMRYIRNLMAQREIMIAEFYMKRRAYVAAANRG 199

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
             V+ ++  +    +A+A +V+AY AL L   A     L+Q  YP    AR +  
Sbjct: 200 SYVVQHFQGSPQVAKALAIMVQAYRALGLPKMADASNHLLQTNYPHTLEARKLRK 254


>gi|315126098|ref|YP_004068101.1| TPR repeat-containing lipoprotein [Pseudoalteromonas sp. SM9913]
 gi|315014612|gb|ADT67950.1| TPR repeat-containing lipoprotein [Pseudoalteromonas sp. SM9913]
          Length = 254

 Score =  236 bits (602), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 54/249 (21%), Positives = 114/249 (45%), Gaps = 12/249 (4%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           ++ K A  I FS++V  L        ++         R  + +YE A   L    +++A 
Sbjct: 4   KIGKRAFAIVFSVSVLSLGACSSAPDQEDIQRVP--NRSAQALYEDAKQTLDSGLYARAI 61

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           E        +PF   +++  +   +  Y +G  +QA +  + +I   P  K++DY+YY+ 
Sbjct: 62  ELLTAIDSRYPFGPFSKQVQMDLVYAHYQSGNTEQALATIDRFIRLNPNHKDLDYMYYMR 121

Query: 138 GMSYAQMIRD----------VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           G+   +  ++             D + T++    +S +V+R+  S Y   A+  +    N
Sbjct: 122 GLVNIKADKNAFQEYFGVDRADRDAKRTRVAYTDLSTLVKRFPESDYAPEAKRRLVWLLN 181

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
           ++A  E+++  YY +R  Y+AA  R + V+ +YS + + + A+A + ++Y  L L + ++
Sbjct: 182 RMARYELKVATYYYEREAYLAAANRGKYVVEHYSQSSYLDAALAMMEKSYEKLGLTELSQ 241

Query: 248 EVVSLIQER 256
                 +  
Sbjct: 242 HAEQTRKFN 250


>gi|77359879|ref|YP_339454.1| TPR repeat-containing lipoprotein [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76874790|emb|CAI86011.1| putative lipoprotein with tetratricopeptide repeats (TPR) domain
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 254

 Score =  236 bits (602), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 52/244 (21%), Positives = 110/244 (45%), Gaps = 12/244 (4%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           ++ K A  I FS++V  L        ++         +    +YE A   L    +++A 
Sbjct: 4   KIGKRAFAIVFSVSVLSLGACSSAPDQEDIQRVP--NKSAHALYEDAKQTLDSGLYARAI 61

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           E  +     +PF   +++  +   +  Y +G  +QA +  + +I   P  K++DY+YY+ 
Sbjct: 62  ELLSAIDSRYPFGPFSKQVQMDLVYAHYQSGNTEQALATIDRFIRLNPNHKDLDYMYYMR 121

Query: 138 GMSYAQMIRD----------VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           G+   +  ++             D   T++    +S +V+R+  S Y   A+  +    N
Sbjct: 122 GLVNIKADKNAFQEYFGVDRADRDANRTRVAFTDLSTLVKRFPQSDYAPEAKRRLVWLLN 181

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
           ++A  E+++  YY +R  Y+AA  R + V+ +YS + +   A+  + ++Y  L L + + 
Sbjct: 182 RMARYELKVATYYYEREAYLAAANRGKFVVEHYSQSSYLNSALEMMEKSYDKLGLSELSE 241

Query: 248 EVVS 251
           +   
Sbjct: 242 DAKQ 245


>gi|120553809|ref|YP_958160.1| DNA uptake lipoprotein [Marinobacter aquaeolei VT8]
 gi|120323658|gb|ABM17973.1| DNA uptake lipoprotein [Marinobacter aquaeolei VT8]
          Length = 277

 Score =  235 bits (601), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 50/219 (22%), Positives = 102/219 (46%), Gaps = 10/219 (4%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           +V  ++  YE A   +   NF++A +  +     +PF   A ++ L   F +Y     + 
Sbjct: 27  EVLPEQTYYENAREAMNSGNFNEAEQNLDALETYYPFGRYAEQAQLDLIFARYQNLDLEG 86

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYM 162
           + +  + +I   P+S+++DY  Y+ G++   +          +     +        +  
Sbjct: 87  SRAAADRFIRLNPQSEHLDYALYMRGLASYNLDLGLATRYFPVDAAARNPGEQLQAFRDF 146

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
           S+++ R+ +S Y   AR  +   RN++A  E+   RYY+KR  YVAA  R + V+ NY  
Sbjct: 147 SQLLNRFPDSDYALDARQRMIAIRNRMAELELHAARYYIKREAYVAANNRARYVVENYPS 206

Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +   EEA+  + + +  L L   A + ++ +++ +P   
Sbjct: 207 SPSVEEALMIMADTFRFLELKKGANDAIATLRKNFPNSD 245


>gi|152977724|ref|YP_001343353.1| TPR repeat-containing protein [Actinobacillus succinogenes 130Z]
 gi|150839447|gb|ABR73418.1| TPR-repeat-containing protein [Actinobacillus succinogenes 130Z]
          Length = 270

 Score =  235 bits (601), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 48/214 (22%), Positives = 96/214 (44%), Gaps = 10/214 (4%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           +   ++E++ K   +++E N+S A +Y       FP +  + ++ L   +  Y    Y  
Sbjct: 27  EQASEQELFTKGQAYVQEGNYSDATKYLQAVDSRFPGSDYSEQAELNLIYAAYRNQDYTT 86

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYM 162
           A    + ++  +P+S++ DYV Y+  ++   M          I     +  + K      
Sbjct: 87  ALVTADRFLQLHPQSQHTDYVLYMAALTNMSMGDNFIQDFFGIDRASRESTSMKTAFGNF 146

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
             +V+ + NSPY   A   +   +++LA  E+EI ++Y KR  +VA   R   +L  Y D
Sbjct: 147 QTLVQHFPNSPYTPDAITRMAYIKDRLARHELEIAKFYAKRNAWVAVSNRVTGMLQTYPD 206

Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
                +A+  L +AY  + L    ++  +L++  
Sbjct: 207 TNATLQALPLLEKAYHEMGLTQLEQKAATLVKAN 240


>gi|315634973|ref|ZP_07890254.1| DNA uptake lipoprotein [Aggregatibacter segnis ATCC 33393]
 gi|315476235|gb|EFU66986.1| DNA uptake lipoprotein [Aggregatibacter segnis ATCC 33393]
          Length = 261

 Score =  235 bits (601), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 58/251 (23%), Positives = 107/251 (42%), Gaps = 20/251 (7%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
             +L  FAL    ++AV         S +DV      +   ++ +Y     +L++ ++S+
Sbjct: 1   MRKLKSFALLTAMALAVTAC----SSSKQDV------EQAPEQTLYSTGQTYLQDGDYSQ 50

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A  Y N  S  FP +  + +  L   +  Y    Y +     + +I ++P S ++DY  Y
Sbjct: 51  AIRYLNAVSSRFPGSSYSEQVQLNLIYAYYKTQDYSETLVTIDRFIQRFPNSSHLDYALY 110

Query: 136 LVGMSYAQMIRDVPYD----QRATKL------MLQYMSRIVERYTNSPYVKGARFYVTVG 185
           + G++ + +  +   D     RAT+              +V+ + NSPY   A   +T  
Sbjct: 111 MAGLTNSALGDNFFQDFFGVDRATRENTSIKTAFANFQNLVQHFPNSPYTPDALARMTYI 170

Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
           +  LA  E+ I ++Y KR  YVA   R   +L  Y D +   +A+  +  +Y  + L   
Sbjct: 171 KASLARHELAIAKFYFKRDAYVATANRVVSMLKLYPDTQATLDALPLMKASYEKMNLTHL 230

Query: 246 AREVVSLIQER 256
           A +   +I   
Sbjct: 231 ADQTAKIIAAN 241



 Score = 36.6 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 29/73 (39%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
              G+ YL+ G+Y  AI     V + +  + ++E+    L+ AY       E    +   
Sbjct: 36  YSTGQTYLQDGDYSQAIRYLNAVSSRFPGSSYSEQVQLNLIYAYYKTQDYSETLVTIDRF 95

Query: 254 QERYPQGYWARYV 266
            +R+P      Y 
Sbjct: 96  IQRFPNSSHLDYA 108


>gi|153209399|ref|ZP_01947385.1| competence lipoprotein ComL [Coxiella burnetii 'MSU Goat Q177']
 gi|120575370|gb|EAX31994.1| competence lipoprotein ComL [Coxiella burnetii 'MSU Goat Q177']
          Length = 255

 Score =  235 bits (600), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 10/235 (4%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           +DV        +   E++      L ++++S+A + F      +PF   A ++ L   + 
Sbjct: 20  KDVDPYQAYRGKTSAELFTSGERALAKKDYSEAVKNFEALDAIYPFGPHAEQAQLDIIYA 79

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQR 153
            Y       A +  + YI  YP  +NVDY YY+ G+    +          +  V  D  
Sbjct: 80  YYKNNDTSSAIAAADRYIRLYPRGRNVDYAYYMRGVIGFDLGLSWLQKLARVSPVSRDVS 139

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
             +      + + E + +S Y   A   +   RN +A +E+ I  +Y+KR  YVAA  R 
Sbjct: 140 TLQQSFTSFATLAEVFPHSRYTPDALTRMRYIRNLMAQREIMIAEFYMKRRAYVAAANRG 199

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
             V+ ++  +    +A+A +V+AY AL L   A     L+Q  YP    AR +  
Sbjct: 200 SYVVQHFQGSPQVAKALAIMVQAYRALGLPKMADASNHLLQTNYPHTLEARKLRK 254


>gi|212212776|ref|YP_002303712.1| lipoprotein, ComL family [Coxiella burnetii CbuG_Q212]
 gi|212011186|gb|ACJ18567.1| lipoprotein, ComL family [Coxiella burnetii CbuG_Q212]
          Length = 272

 Score =  235 bits (600), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 10/235 (4%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           +DV        +   E++      L ++++S+A + F      +PF   A ++ L   + 
Sbjct: 37  KDVDPYQAYRGKTSAELFTSGERALAKKDYSEAVKNFEALDAIYPFGPHAEQAQLDIIYA 96

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQR 153
            Y       A +  + YI  YP  +NVDY YY+ G+    +          +  V  D  
Sbjct: 97  YYKNNDTSSAIAAADRYIWLYPRGRNVDYAYYMRGVIGFDLGLSWLQKLARVSPVSRDIS 156

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
             +      + + E + +S Y   A   +   RN +A +E+ I  +Y+KR  YVAA  R 
Sbjct: 157 TLQQSFTSFATLAEVFPHSRYTPDALTRMRYIRNLMAQREIMIAEFYMKRRAYVAAANRG 216

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
             V+ ++  +    +A+A +V+AY AL L   A     L+Q  YP    AR +  
Sbjct: 217 SYVVQHFQGSPQVAKALAIMVQAYRALGLPKMADVSNHLLQTNYPHTLEARKLRK 271


>gi|332970081|gb|EGK09078.1| competence lipoprotein ComL [Kingella kingae ATCC 23330]
          Length = 268

 Score =  235 bits (600), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 60/260 (23%), Positives = 104/260 (40%), Gaps = 13/260 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + KF L I  + A+          S+D  L   T      ++Y +A   L + N+++A  
Sbjct: 1   MKKFLLVISVAAALSACASNASTVSKDAQL---TQNWSNDQLYSEARQELNDGNYTRATA 57

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            +              +SL+ SA+  +   +  +A      +   YP S ++DY  YL G
Sbjct: 58  LYELLRARQADGRYTEQSLIESAYAHFKNEEPAKALQNLARFEQNYPASVDMDYALYLKG 117

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +      +              D  A +   +   ++V RY NS Y + AR  +    + 
Sbjct: 118 LVLFAEDQSFLRRLASQDWSDRDPEANRRAFRVFEQLVNRYPNSKYAEDARKRMAQLVDA 177

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           L   E+ I RYY KR  Y+AA  R Q +L  + +  + EEA+A +V  Y  +   D A  
Sbjct: 178 LGGHEIAIARYYAKRTAYLAANNRAQRILEQFQNTRYVEEALAIMVYTYEQMGNADMAEA 237

Query: 249 VVSLIQERYPQGYWARYVET 268
              ++ +  P   + +    
Sbjct: 238 TRRVLAQNLPNSPYLQQAWK 257


>gi|325921579|ref|ZP_08183424.1| outer membrane assembly lipoprotein YfiO [Xanthomonas gardneri ATCC
           19865]
 gi|325547933|gb|EGD18942.1| outer membrane assembly lipoprotein YfiO [Xanthomonas gardneri ATCC
           19865]
          Length = 293

 Score =  235 bits (600), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 60/264 (22%), Positives = 117/264 (44%), Gaps = 18/264 (6%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           A  I   + + F+V    + +++   D         ++Y K+   +++ N++ A   + +
Sbjct: 11  ARLIALMLVMAFVVTGCHRGAKNKNPDEG---MPVEQLYGKSHGLMEKGNWAGAEASYKR 67

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
               +P+     ++++ +A+ QY AGK+    S  + +I  YP  +N+ Y+YYL G++ +
Sbjct: 68  LIAQYPYGPYTEQAMIETAYAQYKAGKHDDTVSSVDRFIRTYPTHRNISYLYYLRGLANS 127

Query: 143 QMI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
                             D  + +      + + +RY NS Y   AR  +   R+  A  
Sbjct: 128 NRDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAPDARKRMIELRDVFAQH 187

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           E++   YYL+R  +V+A  R   +L  Y  + +  +A+A L EAY  L     A +   +
Sbjct: 188 ELDNALYYLRRNAWVSAAGRANYLLETYPQSAYQYDAVAVLAEAYTHLGNKTLAADARRV 247

Query: 253 IQERYPQ-----GYWARYVETLVK 271
           ++   PQ     G W +Y   + K
Sbjct: 248 LELNSPQHPWLTGNWPKYPWAIRK 271


>gi|254499158|ref|ZP_05111842.1| hypothetical protein LDG_3116 [Legionella drancourtii LLAP12]
 gi|254351619|gb|EET10470.1| hypothetical protein LDG_3116 [Legionella drancourtii LLAP12]
          Length = 259

 Score =  235 bits (599), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 59/247 (23%), Positives = 106/247 (42%), Gaps = 10/247 (4%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           K    +F    +  L   +   ++D    +        +++  +   L++  ++ A +  
Sbjct: 2   KRIQVLFLVGLLVSLSSCKTWWNKDDEDKNPFKGMSAEQLHTDSQKALRKGEYASAIKRL 61

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
                 +PF+     S +   +  Y    Y  AA+  E +I  YP +KNVDY YY+ G++
Sbjct: 62  EAIETMYPFSDYTESSQMDLIYAYYKNEDYPSAAATAERFIHLYPRAKNVDYAYYMRGLA 121

Query: 141 YAQMIRDVP----------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
             Q  R V            D           + +++++  S Y   A   +   RN  A
Sbjct: 122 NFQQTRGVFAKVLPLDESWRDPGTQTQAYSDFAVLIQKFPESKYKANALQRMIYLRNMFA 181

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
            +E+ + ++Y KR  YVAAI R   ++ NY  A  A++A+  + ++ VAL L   A EV 
Sbjct: 182 QQELNVSKFYFKRKMYVAAIERASYLVKNYPQAPSAQQALVIMYKSNVALGLNKTAEEVK 241

Query: 251 SLIQERY 257
           ++ Q  Y
Sbjct: 242 TVYQATY 248



 Score = 42.0 bits (98), Expect = 0.094,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 28/70 (40%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           L++GEY +AI R + +   Y  +++ E +   L+ AY        A          YP+ 
Sbjct: 49  LRKGEYASAIKRLEAIETMYPFSDYTESSQMDLIYAYYKNEDYPSAAATAERFIHLYPRA 108

Query: 261 YWARYVETLV 270
               Y   + 
Sbjct: 109 KNVDYAYYMR 118



 Score = 35.1 bits (80), Expect = 9.6,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 50/150 (33%), Gaps = 40/150 (26%)

Query: 137 VGMSYAQMIRDVPYDQRATKL-----MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
            GMS  Q+  D    Q+A +       ++ +  I   Y  S Y + ++  +         
Sbjct: 34  KGMSAEQLHTDS---QKALRKGEYASAIKRLEAIETMYPFSDYTESSQMDLIYA------ 84

Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR------------------L 233
                   Y K  +Y +A    +  +  Y  A++ + A                     L
Sbjct: 85  --------YYKNEDYPSAAATAERFIHLYPRAKNVDYAYYMRGLANFQQTRGVFAKVLPL 136

Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWA 263
            E++       +A    +++ +++P+  + 
Sbjct: 137 DESWRDPGTQTQAYSDFAVLIQKFPESKYK 166


>gi|88811116|ref|ZP_01126372.1| probable transmembrane protein [Nitrococcus mobilis Nb-231]
 gi|88791655|gb|EAR22766.1| probable transmembrane protein [Nitrococcus mobilis Nb-231]
          Length = 251

 Score =  235 bits (599), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 92/220 (41%), Gaps = 10/220 (4%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D     +    +Y+KA   L   ++  A +        +PF   + ++ L   +  Y A 
Sbjct: 23  DEPEQSQQAATLYDKARELLDAGDYMAAVKRLEDLQAQYPFGPYSEQAQLNIIYAYYKAN 82

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLM 158
               A +  + +I   P    V Y YY+ G++  +           +     D    +  
Sbjct: 83  DTVSAVAAADRFIRFNPRHAKVAYAYYMKGVAQQEQGLGFIQSLLHMDRAKRDPEPLRQA 142

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
                 ++E Y  S Y   AR  +   R+ LA  E++I +YY++RG +VAAI R + V+ 
Sbjct: 143 FYSFRSLLEAYPESRYADDARQRMAQLRDLLAQHELQICQYYIRRGAWVAAINRARSVVL 202

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           +Y+      EA+  L++ Y  + L     +V  +++  YP
Sbjct: 203 DYAGTPAVAEALHLLLQGYQHIELPALKEDVRRVLRLNYP 242


>gi|285017489|ref|YP_003375200.1| lipoprotein precursor [Xanthomonas albilineans GPE PC73]
 gi|283472707|emb|CBA15212.1| putative lipoprotein precursor [Xanthomonas albilineans]
          Length = 291

 Score =  235 bits (599), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 62/263 (23%), Positives = 109/263 (41%), Gaps = 21/263 (7%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
                 + +    G  R            +     ++Y+K    ++  N+S A   F + 
Sbjct: 14  FIALLLVTLVVATGCHRHKKD------PEEGMPVEQLYQKGHAQMESGNWSGADHSFKRL 67

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +P+     ++++ SA+ QY AGK+  A S  + +I  YP  +N+ Y+YYL G+S + 
Sbjct: 68  IAQYPYGQYTEQAMIESAYAQYKAGKHDDAVSTIDRFIRTYPTQRNIAYMYYLRGLSNSN 127

Query: 144 MI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
                            D    +      + + +RY NS Y   AR  +   RN  A  E
Sbjct: 128 RDTVFLRRLWSLDPSRRDLSTPQQAYADFNTVTDRYPNSRYAADARERMIALRNVFAQHE 187

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           ++   YYL+RG +V+A  R   +L  Y  +    +A+A L +AY  L     A +   ++
Sbjct: 188 LDNALYYLRRGAWVSATSRANYLLETYPQSAFQYDAVAVLADAYTHLGNKALAADARRVL 247

Query: 254 QERYPQ-----GYWARYVETLVK 271
           +   P+     G W +Y   + K
Sbjct: 248 ELNDPKHPWLSGQWPKYPWMIRK 270


>gi|325265796|ref|ZP_08132483.1| competence lipoprotein ComL [Kingella denitrificans ATCC 33394]
 gi|324982779|gb|EGC18404.1| competence lipoprotein ComL [Kingella denitrificans ATCC 33394]
          Length = 268

 Score =  235 bits (599), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 58/253 (22%), Positives = 101/253 (39%), Gaps = 10/253 (3%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            +  SI +  L      ++       ++       +Y +A   L   N+S A   +    
Sbjct: 4   IVAASIVMAILSACATPNATVSKDAQMSKDWSNDRLYSEARNALNSGNYSHANALYGVLR 63

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
              P      +SLL SA+  Y   +  QA +L   +   YP S ++DY  YL G+ +   
Sbjct: 64  ARQPDGRYTEQSLLDSAYAHYKNEEMSQALALLSRFERNYPASVDMDYALYLKGLIFFAE 123

Query: 145 IRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
            +              D  A +   +   ++V R+  S Y + +R  +    + L   E+
Sbjct: 124 DQSFLRKLASQDWSDRDPEANRRAFRVFEQLVNRFPQSKYAEDSRRRMAQLVDALGGHEI 183

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
            I RYY KR  YVAA  R Q VL  Y +  + EEA+A ++ +Y  +     A +   ++Q
Sbjct: 184 AIARYYAKRHAYVAANNRAQRVLQQYQNTRYVEEALAIMIFSYEKMGNTQLADDTRRVLQ 243

Query: 255 ERYPQGYWARYVE 267
           + +    +     
Sbjct: 244 QNFANSPYLAKSW 256


>gi|47779343|gb|AAT38572.1| predicted secreted lipoprotein [uncultured gamma proteobacterium
           eBACHOT4E07]
          Length = 272

 Score =  234 bits (598), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 101/252 (40%), Gaps = 17/252 (6%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
                K   T+ F + +  ++   +    ++        + ++  Y++A   +   N+  
Sbjct: 1   MKDFKKNIKTLIFGLFLTLIIAGCKSDGEEIE-------QPEKIYYDQAQARMSSGNYFG 53

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A E        +PF   A ++ +   +  +   + + A S  E++I  +P   N+DY Y+
Sbjct: 54  AIESLEAIDTRYPFGKYAEQAQIELIYAHFMNTETEAAHSAAEKFIRLHPRHPNIDYAYF 113

Query: 136 LVGMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           + G+S     RD+            D    K     ++  + R+ +S YV  A+      
Sbjct: 114 MKGLSSYTRDRDLLIRFTDTDISNRDVSGAKASFAELTEFITRFPDSQYVSYAKQRNIYL 173

Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
           RN +A  E+    YYL    ++ AI R   V+ N  ++     A+  L E+Y AL   + 
Sbjct: 174 RNLIAKSELSAADYYLTIDAHIGAIRRANYVIENIPNSSENYRALKILEESYEALGYTEL 233

Query: 246 AREVVSLIQERY 257
             ++  ++   Y
Sbjct: 234 LEDIRQVLSSNY 245


>gi|15603585|ref|NP_246659.1| hypothetical protein PM1720 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|18202811|sp|Q9CKA5|Y1720_PASMU RecName: Full=UPF0169 lipoprotein PM1720; Flags: Precursor
 gi|12722132|gb|AAK03804.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 260

 Score =  234 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 61/248 (24%), Positives = 108/248 (43%), Gaps = 18/248 (7%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K     F ++    +                 + R ++E+Y      L+  ++S+A  
Sbjct: 1   MRKLKSFTFIALTAFAITACSGSKD--------VEQRPEQELYNVGQTHLQNGDYSQAIR 52

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
           Y +     FP +  + ++LL   +  Y    Y Q   L + +  QYP S+N+DYV Y+ G
Sbjct: 53  YLDAVRSRFPGSSYSEQTLLNLIYANYKTQDYTQTLVLADRFFQQYPTSRNLDYVLYMAG 112

Query: 139 MSYA----QMIRDVPYDQRATKL------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++ A      I+D+    RAT+              +V+ + NSPY + A   +   +  
Sbjct: 113 LTNAALGDNYIQDLFRIDRATRESSSIKAAFANFQTLVQNFPNSPYAQDALARMAYIKAS 172

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E+ I ++Y KR  +VA   R   +L  Y D +   EA+  + EAY  + L D A +
Sbjct: 173 LARHELAIAKFYAKRDAHVAVANRVVGMLQQYPDTQATYEALPLMQEAYEKMNLNDLAAK 232

Query: 249 VVSLIQER 256
             ++I+  
Sbjct: 233 TAAIIEAN 240


>gi|238021800|ref|ZP_04602226.1| hypothetical protein GCWU000324_01703 [Kingella oralis ATCC 51147]
 gi|237866414|gb|EEP67456.1| hypothetical protein GCWU000324_01703 [Kingella oralis ATCC 51147]
          Length = 276

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 56/255 (21%), Positives = 109/255 (42%), Gaps = 11/255 (4%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKAY 77
           + K  L I  ++A+      ++     +  D++        ++Y +A   L  +N+ +A 
Sbjct: 5   MKKSLLFIALAVALTGCAFKDKAKKVKIDSDTIAAQNWSNDQLYNEARSELNAKNYDRAN 64

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           + +              +SLL +A+  Y   +  +A +L   +   YP S ++DY  YL 
Sbjct: 65  KLYEILRARQAPGRYTEQSLLDAAYAHYKNEEPAKALALLSRFEHNYPASIDMDYALYLR 124

Query: 138 GMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           G+      +              D +A +   +  + +V RY +S Y + AR  +    +
Sbjct: 125 GLVLFDEDQSFLRKLASQDWSDRDPQANRRAYRVFNELVTRYPDSKYAEDARKRMAQLVD 184

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
            L   ++ I +YY KRG Y+AA  R Q V+  + +    EEA+A +   Y  +     A 
Sbjct: 185 ALGGHQIAIAKYYAKRGAYLAANNRAQEVIKQFQNTRFVEEALAIMAYTYGKMGNEQSAN 244

Query: 248 EVVSLIQERYPQGYW 262
           +   ++Q+ +PQ  +
Sbjct: 245 DTKRVLQQNFPQSPY 259



 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 42/117 (35%), Gaps = 22/117 (18%)

Query: 75  KAYEYFNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEY 120
           +AY  FN+    +P +  A  +               +  A      G Y  A +  +E 
Sbjct: 154 RAYRVFNELVTRYPDSKYAEDARKRMAQLVDALGGHQIAIAKYYAKRGAYLAANNRAQEV 213

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           I Q+  ++ V+    ++  +Y +M  +        +        + + +  SPY++ 
Sbjct: 214 IKQFQNTRFVEEALAIMAYTYGKMGNE--------QSANDTKRVLQQNFPQSPYLQQ 262


>gi|198282732|ref|YP_002219053.1| outer membrane assembly lipoprotein YfiO [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|198247253|gb|ACH82846.1| outer membrane assembly lipoprotein YfiO [Acidithiobacillus
           ferrooxidans ATCC 53993]
          Length = 261

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 58/246 (23%), Positives = 108/246 (43%)

Query: 17  YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
           Y+L  F          C  +     S+ +   +S       R +++ A   +   +++ A
Sbjct: 5   YRLLSFMSKRILMSLCCAALIAGCASTPNNPDNSAVSHESARALFQPAKHAMDRGDYAAA 64

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            + F      +P+   A ++ L +A+  Y  G  + AA+  E +I  +P +  VDY +YL
Sbjct: 65  IKLFEDLETRYPYGPYAEQAQLDTAYSYYQRGDSEAAAAAAERFIKLHPANPYVDYAWYL 124

Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
            G++Y Q I+    + R  +     +  + +R+ +S Y   AR  +    N L  + ++I
Sbjct: 125 KGIAYYQAIQGAQENPRPAEEAFSTLDTLAKRWPHSVYAADARLRMAKIINILGQRNLDI 184

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            ++Y  R  YVA+  R   V+  Y  +   EEA+  L   Y  L L   A+  V+++   
Sbjct: 185 CKFYYVRHAYVASANRCNTVITRYQLSTAREEALYYLTRDYRHLDLPQLAQTTVAVLAYN 244

Query: 257 YPQGYW 262
           YP   +
Sbjct: 245 YPGSKY 250



 Score = 37.8 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 27/69 (39%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           + RG+Y AAI  F+ +   Y    +AE+A      +Y      + A        + +P  
Sbjct: 56  MDRGDYAAAIKLFEDLETRYPYGPYAEQAQLDTAYSYYQRGDSEAAAAAAERFIKLHPAN 115

Query: 261 YWARYVETL 269
            +  Y   L
Sbjct: 116 PYVDYAWYL 124


>gi|124267193|ref|YP_001021197.1| putative transmembrane protein [Methylibium petroleiphilum PM1]
 gi|124259968|gb|ABM94962.1| putative transmembrane protein [Methylibium petroleiphilum PM1]
          Length = 274

 Score =  233 bits (596), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 58/242 (23%), Positives = 100/242 (41%), Gaps = 16/242 (6%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
            L+G       +    S        ++YE+A       N+ +A + + +          A
Sbjct: 26  GLIGCAGGPKDEFAGKST------DKLYEEARDEAANGNWERASKLYEKLEARTAGTQQA 79

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ---------- 143
           +++ +  A+  Y   +  QA S  E +I  +P S  +DY YYL G+              
Sbjct: 80  QQTQIDLAYAYYKTNEKAQALSTIERFIKLHPSSPAIDYAYYLQGLINFNENLGLLGGLA 139

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
                  DQ+A +   Q   ++  ++ NS Y   A+  +    N LA  EV + RYY +R
Sbjct: 140 RQDLSERDQQAARDAYQSFRQLTLQFPNSKYTPDAQLRMNYIVNTLATYEVHVARYYYRR 199

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
           G YVAA  R Q  +  +  A   EEA+  L  +Y  L L +   +   ++Q  +P+  + 
Sbjct: 200 GAYVAAANRAQQAVQEFQRAPATEEALYILGISYDKLGLTELRDDAQRVLQTNFPESRYV 259

Query: 264 RY 265
           + 
Sbjct: 260 KD 261


>gi|119470040|ref|ZP_01612845.1| putative lipoprotein with tetratricopeptide repeats (TPR) domain
           [Alteromonadales bacterium TW-7]
 gi|119446750|gb|EAW28023.1| putative lipoprotein with tetratricopeptide repeats (TPR) domain
           [Alteromonadales bacterium TW-7]
          Length = 254

 Score =  233 bits (596), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 54/249 (21%), Positives = 110/249 (44%), Gaps = 12/249 (4%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           ++ K A  I FS++V  L        ++         R  + +YE A   L    +++A 
Sbjct: 4   KIGKRAFAIVFSVSVLSLGACSSAPDQEDIQRVP--NRSAQALYEDAKETLDSGLYARAI 61

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           E  +     +PF   +++  +   +  Y +G  +QA +  + +I   P  K++DY+YY+ 
Sbjct: 62  ELLSAIDSRYPFGPFSKQVQMDLVYAHYQSGNTEQALATIDRFIRLNPNHKDLDYMYYMR 121

Query: 138 GMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           G+   +           I     D   T++    +S +V+R+  S Y   A+  +    N
Sbjct: 122 GLVNIKADKNAFQEYFGIDRADRDANRTRVAFTDLSTLVKRFPQSGYAPEAKRRLVWLLN 181

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
           ++A  E+++  YY +R  Y+AA  R + V+ +YS + +   A+  + ++Y  L L + ++
Sbjct: 182 RMARYELKVATYYYEREAYLAAANRGKFVVEHYSQSSYLNAALDMMQKSYEKLGLTELSQ 241

Query: 248 EVVSLIQER 256
                    
Sbjct: 242 NAKKAQALN 250


>gi|160872537|ref|ZP_02062669.1| competence lipoprotein ComL [Rickettsiella grylli]
 gi|159121336|gb|EDP46674.1| competence lipoprotein ComL [Rickettsiella grylli]
          Length = 250

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 61/252 (24%), Positives = 105/252 (41%), Gaps = 13/252 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K  +       +  L      S+           +   +VY+ A   L +  FS+A +
Sbjct: 1   MKKINIVFLVGFIMALLSACASHSNN---PFIAFKGQTVSQVYQNARASLLDGEFSQAIK 57

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            +   +  +PF   + K+ L   +  Y  G    A +  + +I  YP S+ +DY YY+  
Sbjct: 58  SYEALAVLYPFNRYSEKAQLGLIYAYYKDGDSPSAKTAAQRFIYLYPHSQYIDYAYYMRA 117

Query: 139 MSYAQMIRD----------VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           M+     R              D    +L  Q  + ++ RY +SPYV  AR  +   RN 
Sbjct: 118 MADMDQDRGWYLRYVPIDLALRDPGTMRLAYQEFAELIRRYPDSPYVPDARQRMIYLRNL 177

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
            A  E+ I  YY +R  Y+AA  R   ++  Y  A   + A+  +++AY  L L   AR+
Sbjct: 178 FARYELHIADYYFRRKAYIAAANRANEIIQQYQGAPEVKHALMIMIKAYRILGLETLARQ 237

Query: 249 VVSLIQERYPQG 260
            +++ +  YP  
Sbjct: 238 SLAIYRLNYPDS 249



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 25/67 (37%)

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
           GE+  AI  ++ +   Y    ++E+A   L+ AY        A+         YP   + 
Sbjct: 50  GEFSQAIKSYEALAVLYPFNRYSEKAQLGLIYAYYKDGDSPSAKTAAQRFIYLYPHSQYI 109

Query: 264 RYVETLV 270
            Y   + 
Sbjct: 110 DYAYYMR 116


>gi|258545096|ref|ZP_05705330.1| competence lipoprotein ComL [Cardiobacterium hominis ATCC 15826]
 gi|258519673|gb|EEV88532.1| competence lipoprotein ComL [Cardiobacterium hominis ATCC 15826]
          Length = 287

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 10/218 (4%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           T      ++Y+ A   + +  +  A +Y+ +    +PF  VA+++ L  A+  Y  G+ +
Sbjct: 39  TVNWSAEKLYQTAKTEMNDGAYGSASKYYTKLLARYPFGRVAQQATLDLAYAYYRDGETE 98

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQY 161
           +A S  E +I  YP+   +DY YY+ G+   +           I     D +  K    +
Sbjct: 99  KAQSEIENFIRTYPQHPYIDYAYYMRGVFAYEKDVSIFDRLNPINMAQTDPQPLKQAFNH 158

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
              +V R+  S Y + ARF +   +N L   E+EI  YY+++G Y+AAI R + VL  Y 
Sbjct: 159 FDELVRRFPQSEYAEDARFRMLFIKNLLGQHELEIADYYMRKGAYIAAINRAKGVLEQYE 218

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
                  A+A +  AY  L     +++   ++Q  +  
Sbjct: 219 QTPSTPYALALMTRAYRELGEQQLSQDSYRVLQMNFAD 256



 Score = 42.0 bits (98), Expect = 0.086,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 33/88 (37%)

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
               N  A K  +  +  +  G Y +A   +  +LA Y     A++A   L  AY     
Sbjct: 37  DETVNWSAEKLYQTAKTEMNDGAYGSASKYYTKLLARYPFGRVAQQATLDLAYAYYRDGE 96

Query: 243 MDEAREVVSLIQERYPQGYWARYVETLV 270
            ++A+  +      YPQ  +  Y   + 
Sbjct: 97  TEKAQSEIENFIRTYPQHPYIDYAYYMR 124


>gi|218666506|ref|YP_002424926.1| competence lipoprotein ComL, putative [Acidithiobacillus
           ferrooxidans ATCC 23270]
 gi|218518719|gb|ACK79305.1| competence lipoprotein ComL, putative [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 251

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 54/238 (22%), Positives = 103/238 (43%), Gaps = 2/238 (0%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            +        + G     +     +S       R +++ A   +   +++ A + F    
Sbjct: 5   ILMSLCCAALIAGCASTPNN--PDNSAVSHESARALFQPAKHAMDRGDYAAAIKLFEDLE 62

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
             +P+   A ++ L +A+  Y  G  + AA+  E +I  +P +  VDY +YL G++Y Q 
Sbjct: 63  TRYPYGPYAEQAQLDTAYSYYQRGDSEAAAAAAERFIKLHPANPYVDYAWYLKGIAYYQA 122

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
           I+    + R  +     +  + +R+ +S Y   AR  +    N L  + ++I ++Y  R 
Sbjct: 123 IQGAQENPRPAEEAFSTLDTLAKRWPHSVYAADARLRMAKIINILGQRNLDICKFYYVRH 182

Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
            YVA+  R   V+  Y  +   EEA+  L   Y  L L   A+  V+++   YP   +
Sbjct: 183 AYVASANRCNTVITRYQLSTAREEALYYLTRDYRHLDLPQLAQTTVAVLAYNYPGSKY 240



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 27/69 (39%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           + RG+Y AAI  F+ +   Y    +AE+A      +Y      + A        + +P  
Sbjct: 46  MDRGDYAAAIKLFEDLETRYPYGPYAEQAQLDTAYSYYQRGDSEAAAAAAERFIKLHPAN 105

Query: 261 YWARYVETL 269
            +  Y   L
Sbjct: 106 PYVDYAWYL 114


>gi|126735392|ref|ZP_01751138.1| competence lipoprotein ComL, putative [Roseobacter sp. CCS2]
 gi|126715947|gb|EBA12812.1| competence lipoprotein ComL, putative [Roseobacter sp. CCS2]
          Length = 283

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 67/221 (30%), Positives = 118/221 (53%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D    ++++E+    ++  N   A   F +  R +P++  A+++L+M AF  +    
Sbjct: 35  EPLDDLTAQQIFERGERQIERGNPDDAAFTFGEIERLYPYSEFAQRALIMQAFAYHRDED 94

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y  + +  + Y+  YP  ++  Y  YL+ +SY   I +V  DQ  T   LQ +  ++E+Y
Sbjct: 95  YPNSRASAQRYLDFYPAEEDAAYAAYLLALSYYDQIDEVGRDQGLTFQALQSLRLVIEQY 154

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
            +S Y   +     +  + LAAKE+EIGR+YLKRG Y+AA  RF+ V+ ++    H  EA
Sbjct: 155 PDSEYASTSVLKFDLAFDHLAAKEMEIGRFYLKRGNYIAASNRFRTVVEDFQTTSHTPEA 214

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
           + RLVE+Y++L L++EA+   +++   Y    W      L+
Sbjct: 215 LHRLVESYLSLGLLEEAQTAGAILGYNYQSSEWYESSFALL 255


>gi|188575740|ref|YP_001912669.1| competence lipoprotein [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188520192|gb|ACD58137.1| competence lipoprotein [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 277

 Score =  232 bits (593), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 61/258 (23%), Positives = 114/258 (44%), Gaps = 18/258 (6%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
            + + F+V    + ++D   D         ++Y KA   +++ N++ A   F      +P
Sbjct: 1   MLVMAFVVTGCHRGAKDKNPDEG---MPVEQLYGKAHNLMEKGNWAGAEASFKHLIAQYP 57

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI--- 145
           +     ++++ SA+ QY AGK+    S  + +I  YP  +N+ Y+YYL G++ +      
Sbjct: 58  YGPYTEQAMIESAYAQYKAGKHDDTVSSVDRFIRTYPTHRNIAYLYYLRGLANSNRDTVF 117

Query: 146 -------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
                       D  + +      + + +RY NS Y   AR  +   R+  A  E++   
Sbjct: 118 LRHVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAADARKRMIELRDVFAQHELDNAL 177

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           YYL+R  +V+A  R   +L  Y  + +  +A+A L EAY  L     A +   +++   P
Sbjct: 178 YYLRRDAWVSAAGRANYLLETYPQSAYQYDAVAVLAEAYTHLGNKTLAADARRVLELNDP 237

Query: 259 Q-----GYWARYVETLVK 271
           +     G W +Y   + K
Sbjct: 238 KHPWLTGNWPKYPLVIRK 255


>gi|148653371|ref|YP_001280464.1| DNA uptake lipoprotein-like protein [Psychrobacter sp. PRwf-1]
 gi|148572455|gb|ABQ94514.1| DNA uptake lipoprotein-like protein [Psychrobacter sp. PRwf-1]
          Length = 393

 Score =  232 bits (593), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 62/251 (24%), Positives = 108/251 (43%), Gaps = 13/251 (5%)

Query: 21  KFALTIFFSIAVCFLVGWERQS--SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           K A  +  +  +  L G +     +        T  +   + Y++AV  + +  +  A E
Sbjct: 24  KLAFAV-LTAGLLSLTGCQTLKNITGKDSDTVATAEKTDAQYYQEAVKAMDKGRYIYASE 82

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
              +    +P    A ++LL   + Q+    Y+ AA+  E++I  YP +  VDY YY+ G
Sbjct: 83  QLTELRTFYPTGAYAEQALLDLMYSQFQTKDYELAATSAEQFIKLYPRNPQVDYAYYVRG 142

Query: 139 MSYA----------QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++              ++    D    +L       ++ R+ NS Y   A   +T   NQ
Sbjct: 143 VANMHAGTSSLLSIARMQQADRDTSYYRLAFSNFQDLLSRFPNSSYAPDAAQRMTYIYNQ 202

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
            A  E+   R+Y+KR  YVAA  R + V   Y  ++   E++A L  +   L L D A +
Sbjct: 203 FAESELSAARWYIKREAYVAAANRAKWVFQYYPLSQQIPESIAILAYSNEQLGLTDLANQ 262

Query: 249 VVSLIQERYPQ 259
             +L+Q  YP+
Sbjct: 263 YKTLLQINYPE 273



 Score = 35.9 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 28/77 (36%), Gaps = 6/77 (7%)

Query: 197 GRYY------LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
            +YY      + +G Y+ A  +   +   Y    +AE+A+  L+ +       + A    
Sbjct: 62  AQYYQEAVKAMDKGRYIYASEQLTELRTFYPTGAYAEQALLDLMYSQFQTKDYELAATSA 121

Query: 251 SLIQERYPQGYWARYVE 267
               + YP+     Y  
Sbjct: 122 EQFIKLYPRNPQVDYAY 138


>gi|71065815|ref|YP_264542.1| lipoprotein [Psychrobacter arcticus 273-4]
 gi|71038800|gb|AAZ19108.1| possible lipoprotein (DUF0169) [Psychrobacter arcticus 273-4]
          Length = 359

 Score =  232 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 65/253 (25%), Positives = 114/253 (45%), Gaps = 13/253 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSS---RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
             K +     +++V  LVG +   +          VT  + ++  Y  A+  + +  +++
Sbjct: 8   FIKLSSITLLALSV-NLVGCQTFKNLTGGKDVDAVVTAEKSEQAYYNDAIAQIDKGRYTQ 66

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A E        +P    A ++LL   + QY +GKY+ AA+  E++I  YP +  V Y YY
Sbjct: 67  AVEDLTNLRTFYPTGQYAEQALLDMMYAQYESGKYETAAASAEQFIRLYPSNPQVSYAYY 126

Query: 136 LVGMSYAQ---------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
           + G++  Q          +     D    ++       ++ +Y NSPY   A   +T   
Sbjct: 127 VRGVANMQGSSEGLKLFKLNQAERDTAYYRIAFANFQELLNKYPNSPYASDAAQRMTFIY 186

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
           NQ A  E+    +Y++R  YVAA+ R + V   Y  +E   +A+  L  ++  L L D A
Sbjct: 187 NQFAESEMSAANWYIEREAYVAAVNRAKWVFQYYPLSESVPDAITVLAYSHEKLGLTDLA 246

Query: 247 REVVSLIQERYPQ 259
           +E  +L+Q  YP 
Sbjct: 247 KEYKTLLQINYPN 259



 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 22/65 (33%)

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           +G Y  A+     +   Y   ++AE+A+  ++ A       + A          YP    
Sbjct: 61  KGRYTQAVEDLTNLRTFYPTGQYAEQALLDMMYAQYESGKYETAAASAEQFIRLYPSNPQ 120

Query: 263 ARYVE 267
             Y  
Sbjct: 121 VSYAY 125


>gi|114771762|ref|ZP_01449155.1| competence lipoprotein ComL, putative [alpha proteobacterium
           HTCC2255]
 gi|114547578|gb|EAU50469.1| competence lipoprotein ComL, putative [alpha proteobacterium
           HTCC2255]
          Length = 230

 Score =  232 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 65/196 (33%), Positives = 106/196 (54%)

Query: 75  KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
           +A   F    R +P++  A+KSLLMSA   ++   Y+++ +  E Y+  YP   +  +  
Sbjct: 4   EAASLFAAVERQYPYSEWAKKSLLMSAIANHNGAFYEESRADAERYLDFYPADVDAAHAQ 63

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
           YL+ +SY   I +V  DQ  T   LQ    ++ERY NS Y   +     +  + LA  E+
Sbjct: 64  YLIALSYYDQIDNVSRDQSVTFSALQAFRTVIERYPNSEYTSPSLLKFDLSLDHLAGAEM 123

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
           E+GRYYLKRG + AAI RF++V+  +    H  EA+ RLVE+Y++L L+  A+   +++ 
Sbjct: 124 EVGRYYLKRGHFGAAISRFRVVVEEFETTSHTPEALHRLVESYLSLGLIANAQTTGAILG 183

Query: 255 ERYPQGYWARYVETLV 270
             +    W +    L+
Sbjct: 184 HNFQASDWYKDTYVLL 199


>gi|45644679|gb|AAS73067.1| predicted secreted lipoprotein ComL [uncultured marine gamma
           proteobacterium EBAC20E09]
          Length = 273

 Score =  232 bits (592), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 54/242 (22%), Positives = 97/242 (40%), Gaps = 15/242 (6%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
             IA   ++     +S     D     + ++  YE+A   +  +NF  A E        +
Sbjct: 11  ILIAPILMIAISSCNS-----DGPEIEQPEKIYYEQAQRRMAAKNFYGAIESLEAIENRY 65

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
           PF   A ++ +   +  +   + + + S  E++I  +P   N+DY Y++ G+S     R+
Sbjct: 66  PFGKYAEQAQVELIYAHFMNSETEASHSAAEKFIRLHPRHPNIDYAYFMKGLSSYTRDRE 125

Query: 148 V----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
                        D    K     ++  + R+ +S Y   A+      RN +A  E+   
Sbjct: 126 FLTRFTDTDLSNRDISGAKESFSELTEFLTRFPDSQYAPYAKQRNVYLRNMIAKNELAAA 185

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
            YY+    YVAAI R   V+ N  ++     A+  L  +Y AL   +   +V  +I   Y
Sbjct: 186 DYYITIDAYVAAIRRANYVIENIPNSSENYRALKLLETSYDALGYSELLDDVRVVININY 245

Query: 258 PQ 259
           P 
Sbjct: 246 PD 247


>gi|52841419|ref|YP_095218.1| competence lipoprotein ComL [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52628530|gb|AAU27271.1| competence lipoprotein ComL [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 260

 Score =  232 bits (592), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 62/249 (24%), Positives = 108/249 (43%), Gaps = 10/249 (4%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           + F I +   +    +  +D   ++       +++Y  A   LK++ ++ A +       
Sbjct: 9   VLFLIGLVVGISSCTKWGKDDEDNNPYKGMTAKQLYTAAQTSLKKEEYATAAKQLEAMES 68

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
            +PF+     S +   +  Y    Y  AA+  E +I  YP +KNVDY YY+ G++  Q  
Sbjct: 69  MYPFSDYTESSQMQLIYAYYKDEDYPSAAATAERFIHLYPRAKNVDYAYYMRGLANFQQT 128

Query: 146 RDVP----------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           R V            D       L   + +++++ +S Y   A   +   RN  A  E+ 
Sbjct: 129 RGVFAKMLPMDESWRDPGTQTQALVDFATLIQKFPDSKYKANALQRMIYLRNMFAQHELN 188

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           +  YY KR  YVAAI R   ++ NY  A  A++A+  + EA  AL L   A + +++ + 
Sbjct: 189 VSLYYFKRKMYVAAIERASYLVKNYPQAPSAQKALVVMYEANKALGLNKAAEDAMAVYKA 248

Query: 256 RYPQGYWAR 264
            Y      R
Sbjct: 249 TYHTSNMIR 257



 Score = 35.1 bits (80), Expect = 9.9,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 27/70 (38%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           LK+ EY  A  + + + + Y  +++ E +  +L+ AY        A          YP+ 
Sbjct: 51  LKKEEYATAAKQLEAMESMYPFSDYTESSQMQLIYAYYKDEDYPSAAATAERFIHLYPRA 110

Query: 261 YWARYVETLV 270
               Y   + 
Sbjct: 111 KNVDYAYYMR 120


>gi|303257042|ref|ZP_07343056.1| competence lipoprotein ComL [Burkholderiales bacterium 1_1_47]
 gi|302860533|gb|EFL83610.1| competence lipoprotein ComL [Burkholderiales bacterium 1_1_47]
          Length = 283

 Score =  231 bits (591), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 56/229 (24%), Positives = 108/229 (47%), Gaps = 10/229 (4%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           ++  T+     ++Y +A   L E N+  A +Y+ +    +P+   ++++ + +A+  +  
Sbjct: 34  VEDPTEGWTADKLYVEARDNLNEGNYETARDYYQKLEARYPYGRYSQQAQVETAYSYFKE 93

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVG----------MSYAQMIRDVPYDQRATKL 157
           G+ QQA ++ + ++ QYPE     Y  Y+ G          MSY         D +A + 
Sbjct: 94  GEPQQAIAVCDRFLRQYPEHPLSPYALYIKGIATLDEDEGWMSYLTRQDLSKRDAQAARD 153

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
                  +V R+ NS Y + AR  +       A  E+   +YY  R  Y+AAI R + VL
Sbjct: 154 AFDIFKELVLRFPNSRYARDARERMHELVEAQAKYEINTAKYYYVRDAYIAAINRAENVL 213

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
            N+  +  AEEA+  + ++Y  L + D+A ++  ++     +G +  Y+
Sbjct: 214 LNFQTSPQAEEALIIMRDSYNKLGMDDKAADIQRILDANKNRGSYDTYL 262


>gi|264678274|ref|YP_003278181.1| transmembrane protein [Comamonas testosteroni CNB-2]
 gi|262208787|gb|ACY32885.1| putative transmembrane protein [Comamonas testosteroni CNB-2]
          Length = 271

 Score =  231 bits (591), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 63/250 (25%), Positives = 103/250 (41%), Gaps = 17/250 (6%)

Query: 19  LYKFALTIFFS-IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           + + +LT+  + +    L G           D  T       +Y +A        + KA 
Sbjct: 9   MPRISLTLVPAVLIAATLAGCSSTK------DDPTAKWTPERIYTEARDESSSGAYDKAV 62

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
             F +         +A+++ L  A+ QY AG+  QA +  + +   +P S  +DY  YL 
Sbjct: 63  PLFEKLEGRAAGTPLAQQAQLEKAYAQYKAGEKVQALATLDRFTKLHPASPAMDYALYLK 122

Query: 138 GMSYAQ----------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           G+                     DQ+A K   +    +V R+ +S Y   AR  +    N
Sbjct: 123 GLVNFNDNLGMFGWLTRQDLSERDQKAAKDSFESFRELVTRFPDSKYSDDARQRMQYIVN 182

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
            LA  EV + +YY  RG YVAAI R Q  + +Y +     EAM  LV++Y AL +     
Sbjct: 183 SLAQYEVHVAKYYYSRGAYVAAIARAQAAIKDYQNVPAVREAMVILVKSYDALGMTQLRD 242

Query: 248 EVVSLIQERY 257
           +   +++  Y
Sbjct: 243 DAQRVLESSY 252


>gi|170718792|ref|YP_001783974.1| hypothetical protein HSM_0636 [Haemophilus somnus 2336]
 gi|168826921|gb|ACA32292.1| Tetratricopeptide TPR_2 repeat protein [Haemophilus somnus 2336]
          Length = 262

 Score =  231 bits (590), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 62/255 (24%), Positives = 109/255 (42%), Gaps = 20/255 (7%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
            ++L   AL  F S+A   L                 +    + +YEK   +L++ ++S+
Sbjct: 1   MHKLKSLALVAFASLA---LGACSSSG-------KAIEEGTAQTLYEKGHSYLQDADYSQ 50

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A  Y +   + FP +    +  L   +  Y +  Y  A    + +I QYP+S ++DYV Y
Sbjct: 51  AIRYLDTAKKRFPGSQYNEQVQLDLIYAYYKSQDYTNALVTIDRFIQQYPQSSHLDYVIY 110

Query: 136 LVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           + G+S + +          +     +  + K        +V+ + NSPY   A   +   
Sbjct: 111 IAGLSNSALGDNWFQDLFGVDRATRESTSIKTAFANFQTLVQHFPNSPYASDALARMAYI 170

Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
           R  LA  E+EI ++Y KR  +VA   R   +L  Y D +   +A+  +  AY  + L   
Sbjct: 171 RASLARHELEIAKFYAKRNAHVAVANRVVGMLQQYPDTKATLDALPLMKNAYEKMGLTKL 230

Query: 246 AREVVSLIQERYPQG 260
           A++  SLIQ    + 
Sbjct: 231 AQQADSLIQANQNKS 245


>gi|93005954|ref|YP_580391.1| putative lipoprotein (DUF0169) [Psychrobacter cryohalolentis K5]
 gi|92393632|gb|ABE74907.1| putative lipoprotein (DUF0169) [Psychrobacter cryohalolentis K5]
          Length = 359

 Score =  231 bits (590), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 67/253 (26%), Positives = 115/253 (45%), Gaps = 13/253 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSS---RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
             K +     +++V  LVG +   +          VT  + ++  Y  A+  + +  +++
Sbjct: 8   FIKLSSITLLALSV-NLVGCQTFKNLTGGKDVDAVVTAEKSEQAYYNDAIAQIDKGRYTQ 66

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A E        +P    A +SLL   + QY++GKY+ AA+  E++I  YP +  V Y YY
Sbjct: 67  AIEDLTNLRTFYPTGQYAEQSLLDMMYAQYASGKYETAAASAEQFIRLYPSNPQVSYAYY 126

Query: 136 LVGMSYAQ---------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
           + G++  Q          +     D    ++       ++ +Y NSPY   A   +T   
Sbjct: 127 VRGVANMQGSSEGLKLFKLNQAERDTAYYRIAFANFQELLNKYPNSPYAPDAAQRMTFIY 186

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
           NQ A  E+    +Y++R  YVAA+ R + V   Y  +E   +A+A L  ++  L L D A
Sbjct: 187 NQFAESEMSAANWYIEREAYVAAVNRAKWVFQYYPLSESVPDAIAVLAYSHEKLGLTDLA 246

Query: 247 REVVSLIQERYPQ 259
            E  +L+Q  YP 
Sbjct: 247 NEYKTLLQINYPN 259


>gi|113460512|ref|YP_718576.1| DNA uptake lipoprotein [Haemophilus somnus 129PT]
 gi|112822555|gb|ABI24644.1| DNA uptake lipoprotein [Haemophilus somnus 129PT]
          Length = 262

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 62/255 (24%), Positives = 109/255 (42%), Gaps = 20/255 (7%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
            ++L   AL  F S+A   L                 +    + +YEK   +L++ ++S+
Sbjct: 1   MHKLKSLALVAFASLA---LGACSSSG-------KAIEEGTAQTLYEKGHSYLQDADYSQ 50

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A  Y +   + FP +    +  L   +  Y +  Y  A    + +I QYP+S ++DYV Y
Sbjct: 51  AIRYLDTAKKRFPGSQYNEQVQLDLIYAYYKSQDYTNALVTIDRFIQQYPQSSHLDYVIY 110

Query: 136 LVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           + G+S + +          +     +  + K        +V+ + NSPY   A   +   
Sbjct: 111 IAGLSNSALGDNWFQDLFGVDRATRESTSIKTAFANFQTLVQHFPNSPYAADALARMAYI 170

Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
           R  LA  E+EI ++Y KR  +VA   R   +L  Y D +   +A+  +  AY  + L   
Sbjct: 171 RASLARHELEIAKFYAKRNAHVAVANRVVGMLQQYPDTKATLDALPLMKNAYEKMGLTKL 230

Query: 246 AREVVSLIQERYPQG 260
           A++  SLIQ    + 
Sbjct: 231 AQQADSLIQANQNKS 245


>gi|260912660|ref|ZP_05919146.1| DNA uptake lipoprotein [Pasteurella dagmatis ATCC 43325]
 gi|260633038|gb|EEX51203.1| DNA uptake lipoprotein [Pasteurella dagmatis ATCC 43325]
          Length = 291

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 51/250 (20%), Positives = 106/250 (42%), Gaps = 17/250 (6%)

Query: 17  YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
           Y + K       ++    +      ++         + R + E+Y     +L++ ++S++
Sbjct: 30  YPMRKLKSFTLIALTALAVTACSSSNNE-------VEQRPEEELYNAGQTYLQDGDYSQS 82

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
             Y       FP +  + ++LL   F  Y    Y +     + ++ +YP+S ++DYV Y+
Sbjct: 83  IRYLEAVRNRFPGSSHSEQALLNLIFANYKTQDYTKTLVYADRFLQEYPQSSHLDYVLYM 142

Query: 137 VGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
            G++ + +          +     +  + K        +V+ + NSPY K A   +   +
Sbjct: 143 AGLTNSALGDNYIQDLFGVDRATRENSSIKAAFANFQTLVQHFPNSPYAKDALARMVYIK 202

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
             LA  E+ I ++Y KR  ++A   R   +L  Y D +   EA+  + +AY  + L D A
Sbjct: 203 ASLARHELSIAKFYAKRDAHIAVANRVVGMLQQYPDTQATHEALPLMQQAYEKMNLTDLA 262

Query: 247 REVVSLIQER 256
            +   +I+  
Sbjct: 263 AQTAKIIEAN 272



 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 30/73 (41%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
              G+ YL+ G+Y  +I   + V   +  + H+E+A+  L+ A        +        
Sbjct: 67  YNAGQTYLQDGDYSQSIRYLEAVRNRFPGSSHSEQALLNLIFANYKTQDYTKTLVYADRF 126

Query: 254 QERYPQGYWARYV 266
            + YPQ     YV
Sbjct: 127 LQEYPQSSHLDYV 139


>gi|148358772|ref|YP_001249979.1| competence lipoprotein ComL [Legionella pneumophila str. Corby]
 gi|296106817|ref|YP_003618517.1| DNA uptake lipoprotein [Legionella pneumophila 2300/99 Alcoy]
 gi|148280545|gb|ABQ54633.1| competence lipoprotein ComL [Legionella pneumophila str. Corby]
 gi|295648718|gb|ADG24565.1| DNA uptake lipoprotein [Legionella pneumophila 2300/99 Alcoy]
          Length = 257

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 62/249 (24%), Positives = 108/249 (43%), Gaps = 10/249 (4%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           + F I +   +    +  +D   ++       +++Y  A   LK++ ++ A +       
Sbjct: 6   VLFLIGLVVGISSCTKWGKDDEDNNPYKGMTAKQLYTAAQTSLKKEEYATAAKQLEAMES 65

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
            +PF+     S +   +  Y    Y  AA+  E +I  YP +KNVDY YY+ G++  Q  
Sbjct: 66  MYPFSDYTESSQMQLIYAYYKDEDYPSAAATAERFIHLYPRAKNVDYAYYMRGLANFQQT 125

Query: 146 RDVP----------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           R V            D       L   + +++++ +S Y   A   +   RN  A  E+ 
Sbjct: 126 RGVFAKMLPMDESWRDPGTQTQALVDFATLIQKFPDSKYKANALQRMIYLRNMFAQHELN 185

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           +  YY KR  YVAAI R   ++ NY  A  A++A+  + EA  AL L   A + +++ + 
Sbjct: 186 VSLYYFKRKMYVAAIERASYLVKNYPQAPSAQKALVVMYEANKALGLNKAAEDAMAVYKA 245

Query: 256 RYPQGYWAR 264
            Y      R
Sbjct: 246 TYHTSNMIR 254


>gi|54294130|ref|YP_126545.1| hypothetical protein lpl1194 [Legionella pneumophila str. Lens]
 gi|54297143|ref|YP_123512.1| hypothetical protein lpp1188 [Legionella pneumophila str. Paris]
 gi|53750928|emb|CAH12339.1| hypothetical protein lpp1188 [Legionella pneumophila str. Paris]
 gi|53753962|emb|CAH15433.1| hypothetical protein lpl1194 [Legionella pneumophila str. Lens]
 gi|307609941|emb|CBW99469.1| hypothetical protein LPW_12421 [Legionella pneumophila 130b]
          Length = 257

 Score =  230 bits (588), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 62/249 (24%), Positives = 108/249 (43%), Gaps = 10/249 (4%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           + F I +   +    +  +D   ++       +++Y  A   LK++ ++ A +       
Sbjct: 6   VLFLIGLVVGISSCTKWGKDDEDNNPYKGMTAKQLYTAAQTSLKKEEYATAAKQLEAMES 65

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
            +PF+     S +   +  Y    Y  AA+  E +I  YP +KNVDY YY+ G++  Q  
Sbjct: 66  MYPFSDYTESSQMQLIYAYYKDEDYPSAAATAERFIHLYPRAKNVDYAYYMRGLANFQQT 125

Query: 146 RDVP----------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           R V            D       L   + +++++ +S Y   A   +   RN  A  E+ 
Sbjct: 126 RGVFAKMLPMDESWRDPGTQTQALVDFATLIQKFPDSKYKANALQRMIYLRNMFAQHELN 185

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           +  YY KR  YVAAI R   ++ NY  A  A++A+  + EA  AL L   A + +++ + 
Sbjct: 186 VSLYYFKRKMYVAAIERASYLVKNYPQAPSAQKALVVMYEANKALGLNKAAEDAMAVYKA 245

Query: 256 RYPQGYWAR 264
            Y      R
Sbjct: 246 TYHTSNMVR 254


>gi|270156941|ref|ZP_06185598.1| putative competence lipoprotein ComL [Legionella longbeachae
           D-4968]
 gi|289164633|ref|YP_003454771.1| competence lipoprotein comL precursor [Legionella longbeachae
           NSW150]
 gi|269988966|gb|EEZ95220.1| putative competence lipoprotein ComL [Legionella longbeachae
           D-4968]
 gi|288857806|emb|CBJ11652.1| putative competence lipoprotein comL precursor [Legionella
           longbeachae NSW150]
          Length = 257

 Score =  230 bits (588), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 65/256 (25%), Positives = 104/256 (40%), Gaps = 10/256 (3%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           K    +F    +  L   +    +D   +S        ++Y  +   L ++ ++ A ++ 
Sbjct: 2   KRIQMLFLFALIVSLAACKSWWHKDEEDNSPYKGMTAEQLYTASQKDLHKKEYATAIKHL 61

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
                 +PF+    KS L   +  Y    Y  AA+  E +I  YP ++NVDY YY+ GM+
Sbjct: 62  EAIETMYPFSDYTEKSQLDLIYAYYKNEDYPAAAATAERFIHLYPRARNVDYAYYMKGMA 121

Query: 141 YAQMIRDVP----------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
             Q  R V            D             +V+++ +S Y   A   +T  RN  A
Sbjct: 122 NFQQTRGVFAKFLPLDESWRDPGTQIQAYSDFGILVQKFPDSKYKANALQRMTYLRNMFA 181

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
             E+    +Y KR  YVAAI R   V+ NY  A   ++A+  + E+  AL     A E +
Sbjct: 182 QHELNASTFYFKRKMYVAAIERANYVVKNYPQAPSVKQALVVMYESNKALGFNKAAEEAL 241

Query: 251 SLIQERYPQGYWARYV 266
           S+    Y      R V
Sbjct: 242 SIYNATYHTNKMERIV 257


>gi|299533527|ref|ZP_07046904.1| putative transmembrane protein [Comamonas testosteroni S44]
 gi|298718485|gb|EFI59465.1| putative transmembrane protein [Comamonas testosteroni S44]
          Length = 263

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 63/250 (25%), Positives = 103/250 (41%), Gaps = 17/250 (6%)

Query: 19  LYKFALTIFFS-IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           + + +LT+  + +    L G           D  T       +Y +A        + KA 
Sbjct: 1   MPRISLTLVPAVLIAATLAGCSSTK------DDPTAKWTPERIYTEARDESSSGAYDKAV 54

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
             F +         +A+++ L  A+ QY AG+  QA +  + +   +P S  +DY  YL 
Sbjct: 55  PLFEKLEGRAAGTPLAQQAQLEKAYAQYKAGEKVQALATLDRFTKLHPASPAMDYALYLK 114

Query: 138 GMSYAQ----------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           G+                     DQ+A K   +    +V R+ +S Y   AR  +    N
Sbjct: 115 GLVNFNDNLGMFGWLTRQDLSERDQKAAKDSFESFRELVTRFPDSKYSDDARQRMQYIVN 174

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
            LA  EV + +YY  RG YVAAI R Q  + +Y +     EAM  LV++Y AL +     
Sbjct: 175 SLAQYEVHVAKYYYSRGAYVAAIARAQAAIKDYQNVPAVREAMVILVKSYDALGMTQLRD 234

Query: 248 EVVSLIQERY 257
           +   +++  Y
Sbjct: 235 DAQRVLESSY 244


>gi|311693417|gb|ADP96290.1| DNA uptake lipoprotein [marine bacterium HP15]
          Length = 291

 Score =  229 bits (584), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 53/223 (23%), Positives = 103/223 (46%), Gaps = 10/223 (4%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           +   +V  ++  YE A   +   NF++A +  +     +PF   A ++ L   + +Y   
Sbjct: 37  NKQEEVLPEKTYYENAREAMTSGNFNEAEQNLDALETYYPFGRYAEQAQLDLIYARYQNL 96

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLM 158
             + + +  + ++   P+S + DY  Y+ G++   +          I     D       
Sbjct: 97  DLEGSRAAADRFLRLNPQSDHADYALYMRGLASYNLDIGLAARYFPIDVAARDPGEQLQS 156

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
            +  S ++ RY +S YV  AR  +   RN++A  E+   RYY+KR  YVAA  R + ++ 
Sbjct: 157 FRDFSELLNRYPDSQYVADARQRMIAVRNRMAELELYAARYYVKRQAYVAANNRARYIIE 216

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           NY  A   EEA+  L E +  L L   +++ +++++  +P+  
Sbjct: 217 NYPTATVTEEALIILAETFRFLELRKGSQDAIAMLRTNFPESD 259


>gi|332974184|gb|EGK11118.1| DNA uptake lipoprotein family protein [Psychrobacter sp.
           1501(2011)]
          Length = 387

 Score =  228 bits (583), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 63/253 (24%), Positives = 110/253 (43%), Gaps = 13/253 (5%)

Query: 20  YKFALTIFFSIAV-CFLVGWERQS--SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
            K  LT+    A    L G +     +        T  +   + Y++AV  + +  +  A
Sbjct: 21  RKTKLTVALLTAGMLSLTGCQTLKNITGKDSDAVATAEKTDAQYYKEAVDAMDKGRYIYA 80

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            E  ++    +P    A ++LL   + Q+ + +Y  A +  E++I  YP +  VDY YY+
Sbjct: 81  AEQLSELRTFYPTGAYAEQALLDLMYSQFQSNEYALAVTSAEQFIKLYPRNNQVDYAYYV 140

Query: 137 VGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
            G++  Q           ++    D    +L       ++ ++ NS Y   A   +T   
Sbjct: 141 RGVANMQAGTSSLLNITKLQQAHRDTSYYRLAFGNFQELLAKFPNSSYAPDAAQRMTYIY 200

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
           NQ A  E+   R+Y+KR  YVAA  R + V   +  ++   EA+A L      L L D A
Sbjct: 201 NQFAESELSAARWYIKREAYVAAANRAKWVFQYFPQSQQVPEAIAILAYTNEQLGLNDLA 260

Query: 247 REVVSLIQERYPQ 259
           ++  +L+Q  YP+
Sbjct: 261 QQYKTLLQINYPE 273


>gi|84516947|ref|ZP_01004305.1| competence lipoprotein ComL, putative [Loktanella vestfoldensis
           SKA53]
 gi|84509415|gb|EAQ05874.1| competence lipoprotein ComL, putative [Loktanella vestfoldensis
           SKA53]
          Length = 261

 Score =  228 bits (581), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 72/237 (30%), Positives = 118/237 (49%), Gaps = 5/237 (2%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
            LV      S     D        ++++E     ++  N   A   F +  R + ++  A
Sbjct: 2   LLVACSGAGSNVAMED-----LSAQQIFELGERQIEAGNADDAAFTFGEIERLYHYSEFA 56

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
           +++L+M AF  +  G Y  + +  + ++  YP  ++  Y  YL+ +SY   I D+  DQ 
Sbjct: 57  QRALIMQAFAYHRDGDYPNSRAAAQRFVDFYPAEQDAPYAAYLLALSYYDQISDIGRDQG 116

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
            T   LQ + R++E Y +S Y   +     +  +QLAAKE+E+GRYYLKR  Y AA  RF
Sbjct: 117 LTFEALQALRRVIETYPDSEYAAASVAKFDLAFDQLAAKEMEVGRYYLKRANYAAAANRF 176

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
           + V+ ++    H  EA+ RLVEAY++L L DEA+   +++   Y    W      L+
Sbjct: 177 RTVVEDFQTTTHTPEALHRLVEAYLSLGLTDEAQTAGAILGYNYQSSDWYAASFALL 233


>gi|152997614|ref|YP_001342449.1| competence lipoprotein ComL [Marinomonas sp. MWYL1]
 gi|150838538|gb|ABR72514.1| competence lipoprotein ComL, putative [Marinomonas sp. MWYL1]
          Length = 280

 Score =  227 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 60/254 (23%), Positives = 114/254 (44%), Gaps = 20/254 (7%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           L +F+  + FS+   F+V    +  R+  L        +R  Y+KA   LKE   + A +
Sbjct: 7   LLRFSGIVSFSL---FIVACSSKQVREPDLP-------ERVYYDKAQQALKENLPTTAIK 56

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
           +       +PF   + ++ L   + Q  A  +  A +  E +I  +PE  +VDY YY+  
Sbjct: 57  HLKDLDSRYPFGEFSTRAELDLIYAQMEASDFIAAHASAERFIKNHPEHDSVDYAYYMRA 116

Query: 139 MSYAQ----------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +S  +           +     D +        ++    R+  S Y   A+  +   R  
Sbjct: 117 LSTYKGAESLMSRYLNLDPSERDSKELAKAFNELADFTSRFPESTYAPDAKARMYYLREM 176

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           +A  E+++ RYYLKR   ++A+ R Q V+ +Y      EEA+A  +++Y  L   D A+ 
Sbjct: 177 VARHELQVARYYLKRKAPLSALRRSQEVIQHYPSTRSVEEALAISIQSYNDLKQTDLAQT 236

Query: 249 VVSLIQERYPQGYW 262
            ++++++ +P   +
Sbjct: 237 NLAVLKQNFPHTSY 250


>gi|254440813|ref|ZP_05054306.1| outer membrane assembly lipoprotein YfiO [Octadecabacter
           antarcticus 307]
 gi|198250891|gb|EDY75206.1| outer membrane assembly lipoprotein YfiO [Octadecabacter
           antarcticus 307]
          Length = 246

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 3/210 (1%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
            I++  L G     SR        D    ++++E+    L+      A  +F +  R +P
Sbjct: 1   MISLGLLAGCNSFDSR---AAGALDTFSAQQIFERGEFELESGQADDAAFFFGEIERLYP 57

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
           ++  A+++L+M AF  +    Y  + +  + YI  YP  ++  Y  YL+ +SY   I ++
Sbjct: 58  YSEWAKRALIMQAFSYHRDTDYPNSRAAAQRYIDFYPVDEDAAYAQYLLALSYYDQIDEI 117

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
             DQ  T   LQ +  ++ERY +S Y + +     +  + LAAKE+EIGRYYLKR  + A
Sbjct: 118 GRDQGLTFQALQALRVVIERYPDSEYAQSSVLKFDLAFDHLAAKEMEIGRYYLKRDHFAA 177

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
           +I RF++V+ ++    H  EA+ RLVE+Y+
Sbjct: 178 SINRFRIVVEDFQTTSHTPEALHRLVESYL 207



 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 37/123 (30%), Gaps = 28/123 (22%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV---AA 209
                   +   I   Y  S + K A                     Y +  +Y    AA
Sbjct: 40  GQADDAAFFFGEIERLYPYSEWAKRALIMQAFS--------------YHRDTDYPNSRAA 85

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVAL--------ALMDEAREVVSLIQERYPQGY 261
             R+   +  Y   E A  A   L  +Y            L  +A + + ++ ERYP   
Sbjct: 86  AQRY---IDFYPVDEDAAYAQYLLALSYYDQIDEIGRDQGLTFQALQALRVVIERYPDSE 142

Query: 262 WAR 264
           +A+
Sbjct: 143 YAQ 145


>gi|319778231|ref|YP_004129144.1| component of the lipoprotein assembly complex protein [Taylorella
           equigenitalis MCE9]
 gi|317108255|gb|ADU91001.1| component of the lipoprotein assembly complex protein [Taylorella
           equigenitalis MCE9]
          Length = 256

 Score =  225 bits (575), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 51/221 (23%), Positives = 104/221 (47%), Gaps = 10/221 (4%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           T      ++Y+ A  +++ +++  A +Y        P++  A+++++  A+V +   + +
Sbjct: 14  TAGLPADKLYDTARTYVRGRDWDSARKYLAAIENRHPYSSYAQQAMIDEAYVNWKDEQPE 73

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGM----------SYAQMIRDVPYDQRATKLMLQY 161
           +A ++ + ++  YP     +Y+ YL G+          +     +    D R  +     
Sbjct: 74  RAIAVIDRFLQIYPSHPGTEYMLYLKGLITFTPPTHFLTSFAGQKPSERDPRGLRQSYTA 133

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
              +++ Y NS Y   AR  +      LA  E  + +YY ++  YVAAI R Q+VL  +S
Sbjct: 134 FKVLIDNYPNSRYAADARQRLVWLVTTLAEHEANVAKYYYEKKAYVAAINRAQVVLTEFS 193

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
               AE A+  L+++Y AL   D+A +  S++ + YP   +
Sbjct: 194 GVPSAELALYVLMKSYEALGSEDQAADAKSVLVKNYPNSRY 234


>gi|330999931|ref|ZP_08323629.1| outer membrane assembly lipoprotein YfiO [Parasutterella
           excrementihominis YIT 11859]
 gi|329573338|gb|EGG54950.1| outer membrane assembly lipoprotein YfiO [Parasutterella
           excrementihominis YIT 11859]
          Length = 254

 Score =  225 bits (575), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 56/229 (24%), Positives = 108/229 (47%), Gaps = 10/229 (4%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           ++  T+     ++Y +A   L E N+  A +Y+ +    +P+   ++++ + +A+  +  
Sbjct: 5   VEDPTEGWTADKLYVEARDNLNEGNYETARDYYQKLEARYPYGRYSQQAQVETAYSYFKE 64

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVG----------MSYAQMIRDVPYDQRATKL 157
           G+ QQA ++ + ++ QYPE     Y  Y+ G          MSY         D +A + 
Sbjct: 65  GEPQQAIAVCDRFLRQYPEHPLSPYALYIKGIATLDEDEGWMSYLTRQDLSKRDAQAARD 124

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
                  +V R+ NS Y + AR  +       A  E+   +YY  R  Y+AAI R + VL
Sbjct: 125 AFDIFKELVLRFPNSRYARDARERMHELVEAQAKYEINTAKYYYVRDAYIAAINRAENVL 184

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
            N+  +  AEEA+  + ++Y  L + D+A ++  ++     +G +  Y+
Sbjct: 185 LNFQTSPQAEEALIIMRDSYNKLGMDDKAADIQRILDANKNRGSYDTYL 233


>gi|126666671|ref|ZP_01737648.1| DNA uptake lipoprotein [Marinobacter sp. ELB17]
 gi|126628716|gb|EAZ99336.1| DNA uptake lipoprotein [Marinobacter sp. ELB17]
          Length = 265

 Score =  225 bits (574), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 50/219 (22%), Positives = 97/219 (44%), Gaps = 10/219 (4%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
             V  ++  YE A   +   NF++A    +     +PF   A ++ L   F +Y     +
Sbjct: 14  EQVLPEQTYYENARSAMNSGNFNEAETNLDALETYYPFGRYAEQAQLDLIFARYQNLDLE 73

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQY 161
            A +  + ++   P+S++ DY  ++ G++   +          I              + 
Sbjct: 74  GARAAADRFLRLNPQSEHGDYALFMRGLASYNLDIGLAARYFPIEANARAPGEQLQAFRD 133

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
            S ++ RY +S Y   AR  +   RN++A  E+   RYY+ R  Y+AA  R + V+ NY 
Sbjct: 134 FSELLNRYPDSLYAADARQRMIAVRNRMAELELHAARYYITREAYIAANNRARYVVENYP 193

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            +   EEA+  L E +  L +   +++ ++L++  +P  
Sbjct: 194 SSPVVEEAIIILAETFRFLDIKKGSQDAIALLRTNFPDS 232


>gi|73667425|ref|YP_303441.1| hypothetical protein Ecaj_0812 [Ehrlichia canis str. Jake]
 gi|72394566|gb|AAZ68843.1| protein of unknown function UPF0169 [Ehrlichia canis str. Jake]
          Length = 254

 Score =  224 bits (573), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 74/240 (30%), Positives = 126/240 (52%), Gaps = 4/240 (1%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
           TI       F++G         +++     R   E+YE A+     +++  A +   +  
Sbjct: 10  TICLLCCCIFMLGCSLVKKDIKFVEE----RTADEMYESALKKSGIKDYKSAVKDLEEID 65

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
             +PF+ VA K+ LM +F+ Y  G Y +A    ++YI  YP+SK++D+ YYL  M+    
Sbjct: 66  NLYPFSPVAIKARLMMSFLNYELGDYSRAEIYADDYIQLYPDSKDIDFAYYLRIMANYMQ 125

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
           I D+  DQ +   +L+ +   V  + NS Y++     + +    +AAKE  IG++YL+RG
Sbjct: 126 ISDIDRDQSSVNKVLELLDEFVRLFPNSIYLEEVMKRLDLVHQHIAAKEFSIGKFYLQRG 185

Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
           EYVAAI RF  +L  Y D ++  E++ R+ EAY+AL  +    + +SL++E      W +
Sbjct: 186 EYVAAIKRFSTILNKYEDTKYYSESLYRIAEAYLALGDVTAYAKYMSLLKECCINTGWYK 245


>gi|297180027|gb|ADI16252.1| DNA uptake lipoprotein [uncultured bacterium HF0010_16H03]
          Length = 245

 Score =  224 bits (573), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 56/249 (22%), Positives = 99/249 (39%), Gaps = 20/249 (8%)

Query: 20  YKFALTIFF--SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           +K  L  FF  SI   F+VG           D     + ++  Y+ A   ++ +N+  A 
Sbjct: 3   HKLNLKFFFCLSITALFMVGCNS--------DGPEIEQPEKIYYDLAQKRIQSKNYIAAI 54

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           E        +PF   A ++ +   +  +  G+   A +  E++I  +P   N+DY Y + 
Sbjct: 55  ESLQAIETRYPFGRYAEQAQIELIYAYFMNGENLAAHAAAEKFIRLHPRHPNIDYAYLMK 114

Query: 138 GMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           G+S                    D    K     +S  + R+  S Y   A+      RN
Sbjct: 115 GLSSYTRDTSFLVRVTDTDIANRDITGAKESFAELSEFLTRFPESQYSPYAKQRNIYLRN 174

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
            +A  E+    YY+  G Y+AA+ R + V+ N  ++     A+  L E+Y  L  ++   
Sbjct: 175 MIARNELSAADYYVSIGAYIAAVRRAKYVIENIPNSSENLRALVILKESYKNLGYLELYE 234

Query: 248 EVVSLIQER 256
           +V  +I   
Sbjct: 235 DVERIIDLN 243


>gi|254455886|ref|ZP_05069315.1| DNA uptake lipoprotein [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082888|gb|EDZ60314.1| DNA uptake lipoprotein [Candidatus Pelagibacter sp. HTCC7211]
          Length = 283

 Score =  224 bits (573), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 78/251 (31%), Positives = 131/251 (52%), Gaps = 2/251 (0%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + KF L I    A+      +++  ++  +   +      E Y++ +  L+  +   A +
Sbjct: 1   MNKFFLFIILFAALISCA--KKEEFKESIIKEKSLDLQVLEAYQEGMKNLESGDVIYAAK 58

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            FN+    FP +  A KS LM+A+  Y+   Y    +  E ++  YP SKN+DYVYYL+G
Sbjct: 59  KFNEAEILFPQSDWAPKSALMAAYSYYTQDYYADTIAELERFLRVYPLSKNLDYVYYLLG 118

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           +SY + I D   D ++     +Y   +++ Y N+ Y   A F + +  + LAAKE+ IGR
Sbjct: 119 VSYYEQIVDEKKDLQSIIKAKKYFEILIQNYPNTNYSLDAEFKIELVNDTLAAKEMYIGR 178

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           YY  + +++ AI RF+ V+ NY    +AEEA+ RLVE +  L L DEA++  +L+   Y 
Sbjct: 179 YYFDKKKWIPAINRFKTVIDNYDTTLYAEEALHRLVEVHYILGLKDEAKKYANLLGYNYQ 238

Query: 259 QGYWARYVETL 269
              W     ++
Sbjct: 239 SSIWYEKTYSI 249


>gi|146329582|ref|YP_001210176.1| competence protein ComL [Dichelobacter nodosus VCS1703A]
 gi|146233052|gb|ABQ14030.1| competence protein ComL [Dichelobacter nodosus VCS1703A]
          Length = 278

 Score =  224 bits (572), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 55/245 (22%), Positives = 109/245 (44%), Gaps = 16/245 (6%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           +     V FL G              T      ++Y+     ++  +++ A +YF +   
Sbjct: 8   VAIIAMVVFLAGCSG------MQLDHTANWNAHQLYQAGKTEMESSSYTTAIDYFTKLLA 61

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM------ 139
            +P+  +A++S+L  A+  Y AG+ ++A +  + +   YP+   +DY  Y+ G+      
Sbjct: 62  RYPYGVLAQQSMLDIAYSYYRAGEAEKALAQLDSFSKTYPQHPYIDYALYMKGVVEYEKN 121

Query: 140 -SYAQMIRDVPY---DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
            S+ + +        D    K      +++VER+  S Y + AR+ +    N L   ++E
Sbjct: 122 ISFFKRLLPTDLSQTDPTPLKNAFDLFAQLVERFPQSEYAEDARYRMIFLHNLLGKHDLE 181

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           I  +YL++G++VAA  R + +L +Y     A  A+A ++ AY  L     A + + +   
Sbjct: 182 IADFYLRKGDFVAAAARAKNILEHYETTPSAPYALAIMIRAYRELGQKLLADDAMRVFNM 241

Query: 256 RYPQG 260
            Y   
Sbjct: 242 NYVDS 246


>gi|171059557|ref|YP_001791906.1| putative transmembrane protein [Leptothrix cholodnii SP-6]
 gi|170777002|gb|ACB35141.1| putative transmembrane protein [Leptothrix cholodnii SP-6]
          Length = 284

 Score =  224 bits (572), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 61/258 (23%), Positives = 114/258 (44%), Gaps = 14/258 (5%)

Query: 19  LYKFA----LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
           ++KF     L +  + AV  ++             ++ + +   ++YE+A          
Sbjct: 16  MFKFVQPQGLRVLTATAVVAVLLAGSLGGCAADPKALPEHQNVGKLYEEAREEAAAGASD 75

Query: 75  KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
           +A + + +         +A+++ L  AF+ Y   +  Q+ ++ E ++  +P S   DY Y
Sbjct: 76  RAIKLYERLEGLAAGTLLAQQAQLERAFLHYKMQEKAQSLAIIERFLKLHPTSPAADYAY 135

Query: 135 YLVGMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
           YL G+        +            DQ+A++   Q   ++V+RY +S Y   AR  +  
Sbjct: 136 YLQGLINFNDDLGLFGSIVKTDLAERDQQASRDAYQSFKQLVDRYPDSRYAPDARLRINY 195

Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
             N LAA EV + RYY +RG YVA+  R Q  + ++     AEEA+  +  +Y  L +  
Sbjct: 196 IINALAAHEVHVARYYYQRGAYVASANRAQQAVQDFRGVPAAEEALYLMAASYHQLGMAP 255

Query: 245 EAREVVSLIQERYPQGYW 262
              +   ++Q  YP+  W
Sbjct: 256 LRDDAWRVLQNNYPKSRW 273


>gi|88857988|ref|ZP_01132630.1| putative lipoprotein with tetratricopeptide repeats (TPR) domain
           [Pseudoalteromonas tunicata D2]
 gi|88819605|gb|EAR29418.1| putative lipoprotein with tetratricopeptide repeats (TPR) domain
           [Pseudoalteromonas tunicata D2]
          Length = 233

 Score =  223 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 99/233 (42%), Gaps = 12/233 (5%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
            L     +  ++         +  + +Y+ A   L    + +A E  +     +PF  ++
Sbjct: 1   MLSACSSKPEQEQIERVP--NKSAQALYDDAKQTLDSGLYIRAIELLSAIDSRYPFGPMS 58

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM--------- 144
           ++  +   +  Y +    ++ +  + +I   P  K++DY+YY+ G++  +          
Sbjct: 59  KQVQMDLVYAHYQSNNTDKSIATIDRFIRLNPNHKDLDYMYYMRGLNNIKADENAFQEYF 118

Query: 145 -IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
            +     D   T+   + +  ++++Y  S Y   A+       N++A  EV++  YY  R
Sbjct: 119 GVDRADRDPIKTREAYKDLDTLIKKYPTSSYADEAKKRQVWLLNKMARYEVKVANYYYDR 178

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
             Y+AA  R + V+ ++  + + +EA+  +V +Y  L L D       ++Q  
Sbjct: 179 QAYLAAANRGKYVVEHFGQSSYVKEALEIMVNSYDKLGLSDLRDHSEQILQAN 231


>gi|262276887|ref|ZP_06054680.1| outer membrane assembly lipoprotein YfiO [alpha proteobacterium
           HIMB114]
 gi|262223990|gb|EEY74449.1| outer membrane assembly lipoprotein YfiO [alpha proteobacterium
           HIMB114]
          Length = 277

 Score =  223 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 59/253 (23%), Positives = 127/253 (50%), Gaps = 3/253 (1%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           ++K    + F   V  L+G  ++++    +     +     +Y  A    ++ N++++ E
Sbjct: 1   MFKKYHELIFIFLVLVLLGCSKKAN---LVKKPETIPPLNILYTNAYKEFEKGNWTESVE 57

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            F +    + ++  A ++ LM  ++ Y +    Q     E++   Y   + + YV ++  
Sbjct: 58  LFQKVETRYSYSEWAPRATLMILYIHYDSNDSIQTLRYVEKFKKLYSGREEISYVDFIRA 117

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           M++ + I  V  DQ  T++ L+    I+++Y NS Y K ++  + +   QLA KE+ + R
Sbjct: 118 MTFYEQINVVSKDQTYTEVALKEFREIIKKYPNSIYAKESKLKIDLILEQLAGKEMYLAR 177

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           YY+ + ++++A+ R  +VL+ Y    ++ EA+ RLVE Y  L  ++EA++  +L+   + 
Sbjct: 178 YYMNKNKWISALKRLNIVLSKYETTIYSTEALHRLVEIYYRLGNVNEAKKYAALLGYNFN 237

Query: 259 QGYWARYVETLVK 271
              W +    +VK
Sbjct: 238 DSDWYKKTYRIVK 250


>gi|148827315|ref|YP_001292068.1| hypothetical protein CGSHiGG_03480 [Haemophilus influenzae PittGG]
 gi|148718557|gb|ABQ99684.1| conserved hypothetical lipoprotein [Haemophilus influenzae PittGG]
          Length = 262

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 56/231 (24%), Positives = 97/231 (41%), Gaps = 17/231 (7%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
           +G     S+DV   SV       E+Y K    L+E ++S+A  Y    +  FP +    +
Sbjct: 17  IGCSS-GSKDVEQASV------NELYTKGTTSLQEGSYSEAIRYLKATTERFPGSIYQEQ 69

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------I 145
           ++L   +  Y    Y Q     + ++ Q+P+S N  Y  Y+ G++ A            I
Sbjct: 70  AMLDLIYANYKTQDYTQVLLTVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNVIQDFFGI 129

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
                +  + +        +V  + NSPY + A   +   ++ LA  E+EI ++Y KR  
Sbjct: 130 DRATRETTSMRTAFSNFQNLVRAFPNSPYSQDALARMAYIKDALARHELEIAKFYTKRKA 189

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           +VA   R   +L  Y D +   E +  + EAY  + L   A +   +I   
Sbjct: 190 WVAVANRVVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKIIDAN 240


>gi|319942385|ref|ZP_08016699.1| hypothetical protein HMPREF9464_01918 [Sutterella wadsworthensis
           3_1_45B]
 gi|319804073|gb|EFW00981.1| hypothetical protein HMPREF9464_01918 [Sutterella wadsworthensis
           3_1_45B]
          Length = 262

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 55/244 (22%), Positives = 104/244 (42%), Gaps = 18/244 (7%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
            L++  + A C    W +   +D  LD         ++Y +A + L + N+++A +Y+ +
Sbjct: 17  LLSVTLATASC---SWLQSLDKDQTLD-----WSAEKLYSEARVALDDSNWTQAKDYYQK 68

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
               +PF   A+++ +   +  +  G    A    + ++  YP   N DYV YL  ++  
Sbjct: 69  LEARYPFGQYAQQAQIELIYATWKDGDAPGAVQAADRFLQTYPNHANADYVMYLKALATL 128

Query: 143 QMIRD----------VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
                             D  A++        +V RY +S +   AR  +       A  
Sbjct: 129 NETDSWFNKLAGEDLAERDANASREAFDIFKELVMRYPDSRFTPEARRRMHGLVLAQAEH 188

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           E++  RYY  R  YVAAI R Q V+  + +    ++A+  + ++Y AL L + A +   +
Sbjct: 189 ELKTARYYFVRNAYVAAIERAQRVVREFQNTPMRDDALELIAQSYEALKLTELAADTRRI 248

Query: 253 IQER 256
           I+  
Sbjct: 249 IELN 252


>gi|145628475|ref|ZP_01784275.1| conserved hypothetical lipoprotein [Haemophilus influenzae 22.1-21]
 gi|145639767|ref|ZP_01795369.1| pyruvate formate lyase-activating enzyme 1 [Haemophilus influenzae
           PittII]
 gi|144978945|gb|EDJ88631.1| conserved hypothetical lipoprotein [Haemophilus influenzae 22.1-21]
 gi|145271135|gb|EDK11050.1| pyruvate formate lyase-activating enzyme 1 [Haemophilus influenzae
           PittII]
 gi|309750407|gb|ADO80391.1| Probable outer membrane protein assembly complex subunit BamD
           [Haemophilus influenzae R2866]
          Length = 262

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 60/231 (25%), Positives = 101/231 (43%), Gaps = 17/231 (7%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
           +G     S+DV   SV       E+Y K    L+E ++S+A  Y    +  FP +    +
Sbjct: 17  IGCSS-GSKDVEQASV------NELYTKGTTSLQEGSYSEAIRYLKATTERFPGSVYQEQ 69

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA----QMIRDVPYD 151
           ++L   +  Y    Y Q   + + ++ Q+P+S N  Y  Y+ G++ A      I+D    
Sbjct: 70  AMLDLIYANYKTQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNFIQDFFGI 129

Query: 152 QRATKL------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
            RAT+              +V  + NSPY + A   +   ++ LA  E+EI ++Y KR  
Sbjct: 130 DRATRETTSMRTAFSNFQNLVRVFPNSPYSQDALARMAYIKDALARHELEIAKFYAKRKA 189

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           +VA   R   +L  Y D +   E +  + EAY  + L   A +   +I   
Sbjct: 190 WVAVANRVVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKIIDAN 240


>gi|223042000|ref|ZP_03612183.1| putative lipoprotein [Actinobacillus minor 202]
 gi|240949470|ref|ZP_04753810.1| putative lipoprotein [Actinobacillus minor NM305]
 gi|223017198|gb|EEF15627.1| putative lipoprotein [Actinobacillus minor 202]
 gi|240296043|gb|EER46704.1| putative lipoprotein [Actinobacillus minor NM305]
          Length = 260

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 59/264 (22%), Positives = 121/264 (45%), Gaps = 21/264 (7%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + KF       +A   +VG    +++++      +    +++Y K   +L++ +++ A  
Sbjct: 1   MRKFTSLASLILAGLLVVGCSSNANKEL------EEASAQDLYSKGQTYLQDGDYNSAIR 54

Query: 79  YFNQCSRDF-PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           Y +         +    ++ L   + QY  G+Y +A  + E ++  YP S  +DYV+YL 
Sbjct: 55  YLDAVGTKGGQQSQFGEQTQLSLIYAQYKIGEYYKALDIAERFVRAYPNSPQMDYVFYLA 114

Query: 138 GMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
            +S A++          +        + +        IV+ + NS YV  A+ ++   +N
Sbjct: 115 ALSNARLGDNFIQDFFGVNRSSRSTDSVRNAYGSFQTIVKEFPNSKYVPEAQQWMVYLKN 174

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
           +LA  E++I ++Y +R  YVA   R + ++  Y D++   EA+  + +A+  + L D A 
Sbjct: 175 RLAEHELQIVKFYDEREAYVAVANRVEEMMNFYPDSKPTLEALPYMQKAFEKMGLNDSAE 234

Query: 248 EVVSLIQER----YPQGYWARYVE 267
           +V S+I+      +P      Y E
Sbjct: 235 KVASIIEANKNKEFPTITKPEYSE 258


>gi|329123817|ref|ZP_08252375.1| NrfG protein [Haemophilus aegyptius ATCC 11116]
 gi|327469304|gb|EGF14775.1| NrfG protein [Haemophilus aegyptius ATCC 11116]
          Length = 272

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 61/231 (26%), Positives = 102/231 (44%), Gaps = 17/231 (7%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
           +G     S+DV   SV       E+Y K    L+E ++S+A  Y    +  FP +    +
Sbjct: 27  IGCSS-GSKDVEQASV------NELYTKGTTSLQEGSYSEAIRYLKATTERFPGSIYQEQ 79

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA----QMIRDVPYD 151
           ++L   +  Y A  Y Q   + + ++ Q+P+S N  Y  Y+ G++ A      I+D    
Sbjct: 80  AMLDLIYANYKAQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNFIQDFFGI 139

Query: 152 QRATKL------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
            RAT+              +V  + NSPY + A   +   ++ LA  E+EI ++Y KR  
Sbjct: 140 DRATRETTSMRTAFSNFQNLVRVFPNSPYSQDALARMAYIKDALARHELEIAKFYAKRKA 199

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           +VA   R   +L  Y D +   E +  + EAY  + L   A +   +I   
Sbjct: 200 WVAVANRVVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKIIDAN 250


>gi|297170430|gb|ADI21462.1| DNA uptake lipoprotein [uncultured gamma proteobacterium
           HF0070_10G19]
          Length = 263

 Score =  222 bits (567), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 51/242 (21%), Positives = 99/242 (40%), Gaps = 18/242 (7%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            I F I++   +G                 + +++ YE A   +  +N+  A +      
Sbjct: 11  LIIFLISLIVSIGCSSNKE--------VIEQPEQQYYELAQRRMNAKNYFAAIQSLEMIE 62

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
             +PF   A ++     +  Y  G  + A S  E++I  +P   N+DY Y++ G++    
Sbjct: 63  TRYPFGRFAEQAQAELIYANYMMGDDEAAHSAAEKFIRLHPRHPNIDYAYFMRGLASYTR 122

Query: 145 IRDVP----------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
                           D    K     +S  + R++ S Y   A   +   RN +A  E+
Sbjct: 123 DNSFFARVFKNSLARRDISGAKQSFNELSEFLTRFSQSQYAPYANQRLIFLRNIIAKHEL 182

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
               YY+KR  Y+A++ R + V+ N  ++    +A+  + ++Y+ L  +D A EV   ++
Sbjct: 183 AAAEYYVKREAYIASLRRAKYVIENIPNSSENLKALEIMKKSYLELGYLDLAEEVEETMR 242

Query: 255 ER 256
             
Sbjct: 243 IN 244


>gi|145633598|ref|ZP_01789326.1| pyruvate formate lyase-activating enzyme 1 [Haemophilus influenzae
           3655]
 gi|145637337|ref|ZP_01792997.1| conserved hypothetical lipoprotein [Haemophilus influenzae PittHH]
 gi|148825562|ref|YP_001290315.1| hypothetical protein CGSHiEE_02415 [Haemophilus influenzae PittEE]
 gi|229845162|ref|ZP_04465296.1| conserved hypothetical lipoprotein [Haemophilus influenzae 6P18H1]
 gi|229847287|ref|ZP_04467390.1| conserved hypothetical lipoprotein [Haemophilus influenzae 7P49H1]
 gi|144985804|gb|EDJ92418.1| pyruvate formate lyase-activating enzyme 1 [Haemophilus influenzae
           3655]
 gi|145269429|gb|EDK09372.1| conserved hypothetical lipoprotein [Haemophilus influenzae PittHH]
 gi|148715722|gb|ABQ97932.1| conserved hypothetical lipoprotein [Haemophilus influenzae PittEE]
 gi|229809830|gb|EEP45553.1| conserved hypothetical lipoprotein [Haemophilus influenzae 7P49H1]
 gi|229811873|gb|EEP47568.1| conserved hypothetical lipoprotein [Haemophilus influenzae 6P18H1]
 gi|309972702|gb|ADO95903.1| Probable outer membrane protein assembly complex subunit BamD
           [Haemophilus influenzae R2846]
          Length = 262

 Score =  222 bits (566), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 60/231 (25%), Positives = 101/231 (43%), Gaps = 17/231 (7%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
           +G     S+DV   SV       E+Y K    L+E ++S+A  Y    +  FP +    +
Sbjct: 17  IGCSS-GSKDVEQASV------NELYTKGTTSLQEGSYSEAIRYLKATTERFPGSVYQEQ 69

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA----QMIRDVPYD 151
           ++L   +  Y    Y Q   + + ++ Q+P+S N  Y  Y+ G++ A      I+D    
Sbjct: 70  AMLDLIYANYKTQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNFIQDFFGI 129

Query: 152 QRATKL------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
            RAT+              +V  + NSPY + A   +   ++ LA  E+EI ++Y KR  
Sbjct: 130 DRATRETTSMRTAFSNFQNLVRVFPNSPYSQDALARMAYIKDALARHELEIAKFYAKRKA 189

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           +VA   R   +L  Y D +   E +  + EAY  + L   A +   +I   
Sbjct: 190 WVAVANRVVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKIIDAN 240


>gi|68248782|ref|YP_247894.1| hypothetical protein NTHI0266 [Haemophilus influenzae 86-028NP]
 gi|68056981|gb|AAX87234.1| conserved hypothetical lipoprotein [Haemophilus influenzae
           86-028NP]
          Length = 262

 Score =  222 bits (566), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 60/231 (25%), Positives = 101/231 (43%), Gaps = 17/231 (7%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
           +G     S+DV   SV       E+Y K    L+E ++S+A  Y    +  FP +    +
Sbjct: 17  IGCSS-GSKDVEQASV------NELYTKGTTSLQEGSYSEAIRYLKATTERFPGSVYQEQ 69

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA----QMIRDVPYD 151
           ++L   +  Y    Y Q   + + ++ Q+P+S N  Y  Y+ G++ A      I+D    
Sbjct: 70  AMLDLIYANYKTQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNFIQDFFGI 129

Query: 152 QRATKL------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
            RAT+              +V  + NSPY + A   +   ++ LA  E+EI ++Y KR  
Sbjct: 130 DRATRETTSMRTAFSNFQNLVRVFPNSPYAQDALARMAYIKDALARHELEIAKFYAKRKA 189

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           +VA   R   +L  Y D +   E +  + EAY  + L   A +   +I   
Sbjct: 190 WVAVANRVVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKIIDAN 240


>gi|260582392|ref|ZP_05850184.1| pyruvate formate lyase-activating enzyme 1 [Haemophilus influenzae
           NT127]
 gi|260094543|gb|EEW78439.1| pyruvate formate lyase-activating enzyme 1 [Haemophilus influenzae
           NT127]
 gi|301168828|emb|CBW28419.1| predicted lipoprotein [Haemophilus influenzae 10810]
          Length = 262

 Score =  221 bits (565), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 60/231 (25%), Positives = 101/231 (43%), Gaps = 17/231 (7%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
           +G     S+DV   SV       E+Y K    L+E ++S+A  Y    +  FP +    +
Sbjct: 17  IGCSS-GSKDVEQASV------NELYTKGTTSLQEGSYSEAIRYLKATTERFPGSVYQEQ 69

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA----QMIRDVPYD 151
           ++L   +  Y    Y Q   + + ++ Q+P+S N  Y  Y+ G++ A      I+D    
Sbjct: 70  AMLDLIYANYKTQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNFIQDFFGI 129

Query: 152 QRATKL------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
            RAT+              +V  + NSPY + A   +   ++ LA  E+EI ++Y KR  
Sbjct: 130 DRATRETTSMRTAFSNFQNLVRVFPNSPYSQDALARMAYIKDALARHELEIAKFYAKRKA 189

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           +VA   R   +L  Y D +   E +  + EAY  + L   A +   +I   
Sbjct: 190 WVAVANRVVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKIIDAN 240


>gi|88657674|ref|YP_507792.1| putative competence protein ComL [Ehrlichia chaffeensis str.
           Arkansas]
 gi|88599131|gb|ABD44600.1| putative competence protein ComL [Ehrlichia chaffeensis str.
           Arkansas]
          Length = 250

 Score =  221 bits (564), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 76/251 (30%), Positives = 129/251 (51%), Gaps = 5/251 (1%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           K      + +  CFL+       +    +   + R   E+YE A+     + +  A +  
Sbjct: 5   KIIRKAVYLLCCCFLMVNCSFIKK---GEKFVEDRTADEMYESALKKSNAKEYKSAVKDL 61

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
            +    +PF+ VA K+ LM +F+ Y  G Y +A    ++YI  YP+SK++D+ YYL  M+
Sbjct: 62  EEIDNLYPFSPVAIKARLMMSFLNYELGDYSRAEIYADDYIQLYPDSKDIDFAYYLRIMA 121

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
               I D+  DQ +   +L+ ++  +  + NS Y++     + +    +A KE  IG++Y
Sbjct: 122 NYMQISDIDRDQSSVHKVLELLNEFIRLFPNSMYLEEVMKRLELVHQHIAGKEFSIGKFY 181

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           L+RGEYVAAI RF  +L  Y D ++  E++ R+ EAY+AL  +      +SL++E     
Sbjct: 182 LQRGEYVAAIKRFSTILNKYKDTKYYSESLYRIAEAYLALGDIAAYARYMSLLKECCIDT 241

Query: 261 YWARYVETLVK 271
            W +  E LVK
Sbjct: 242 GWYK--EPLVK 250


>gi|87119408|ref|ZP_01075305.1| competence lipoprotein ComL, putative [Marinomonas sp. MED121]
 gi|86164884|gb|EAQ66152.1| competence lipoprotein ComL, putative [Marinomonas sp. MED121]
          Length = 280

 Score =  221 bits (564), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 55/253 (21%), Positives = 105/253 (41%), Gaps = 16/253 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           L K  L +   + +  L+G    +              + E Y+ A     +     A +
Sbjct: 3   LRKSLLQLSGFVGISLLLGACSNA------PVQEPDLPESEYYQNAQEAFDQGRPLVAVQ 56

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF    +++ L   +  + A  Y  A +  E +I +YPE + +DYVYY   
Sbjct: 57  NLKDLDSRYPFGEFTQRAELEIIYAYFLASDYISAHANAERFIKKYPEFETIDYVYYYRA 116

Query: 139 MSYAQ----------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +S  +                 D        +  + +++R+  S Y   A+  +   RN 
Sbjct: 117 LSTFKGGETLSTRYLNQDPSQRDSSEFIKAFREFADLLKRFPESSYASDAKARMIYLRNT 176

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           +A  E+++ +YY KR   +AA+ R Q VL  Y  ++  E+A+A  ++AY+ L   + A +
Sbjct: 177 IARHELQVAKYYFKRNAPLAALHRSQTVLNKYPSSDSVEDALAINIQAYIELEQFELADQ 236

Query: 249 VVSLIQERYPQGY 261
            ++++   YP   
Sbjct: 237 NLAILTNNYPASK 249


>gi|145631296|ref|ZP_01787068.1| conserved hypothetical lipoprotein [Haemophilus influenzae R3021]
 gi|144983081|gb|EDJ90581.1| conserved hypothetical lipoprotein [Haemophilus influenzae R3021]
          Length = 262

 Score =  221 bits (564), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 60/231 (25%), Positives = 101/231 (43%), Gaps = 17/231 (7%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
           +G     S+DV   SV       E+Y K    L+E ++S+A  Y    +  FP +    +
Sbjct: 17  IGCSS-GSKDVEQASV------NELYTKGTTSLQEGSYSEAIRYLKATTERFPGSVYQEQ 69

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA----QMIRDVPYD 151
           ++L   +  Y    Y Q   + + ++ Q+P+S N  Y  Y+ G++ A      I+D    
Sbjct: 70  AMLDLIYANYKTQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNFIQDFFGI 129

Query: 152 QRATKL------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
            RAT+              +V  + NSPY + A   +   ++ LA  E+EI ++Y KR  
Sbjct: 130 DRATRETTSMRTAFSNFQNLVRVFPNSPYSQDALARMAYIKDALARHELEIAKFYAKRKA 189

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           +VA   R   +L  Y D +   E +  + EAY  + L   A +   +I   
Sbjct: 190 WVAVANRVVGMLQQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKIIDAN 240


>gi|319775953|ref|YP_004138441.1| lipoprotein [Haemophilus influenzae F3047]
 gi|319898142|ref|YP_004136339.1| lipoprotein [Haemophilus influenzae F3031]
 gi|317433648|emb|CBY82033.1| predicted lipoprotein [Haemophilus influenzae F3031]
 gi|317450544|emb|CBY86761.1| predicted lipoprotein [Haemophilus influenzae F3047]
          Length = 262

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 61/231 (26%), Positives = 102/231 (44%), Gaps = 17/231 (7%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
           +G     S+DV   SV       E+Y K    L+E ++S+A  Y    +  FP +    +
Sbjct: 17  IGCSS-GSKDVEQASV------NELYTKGTTSLQEGSYSEAIRYLKATTERFPGSIYQEQ 69

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA----QMIRDVPYD 151
           ++L   +  Y A  Y Q   + + ++ Q+P+S N  Y  Y+ G++ A      I+D    
Sbjct: 70  AMLDLIYANYKAQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNFIQDFFGI 129

Query: 152 QRATKL------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
            RAT+              +V  + NSPY + A   +   ++ LA  E+EI ++Y KR  
Sbjct: 130 DRATRETTSMRTAFSNFQNLVRVFPNSPYSQDALARMAYIKDALARHELEIAKFYAKRKA 189

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           +VA   R   +L  Y D +   E +  + EAY  + L   A +   +I   
Sbjct: 190 WVAVANRVVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKIIDAN 240


>gi|301154794|emb|CBW14257.1| predicted lipoprotein [Haemophilus parainfluenzae T3T1]
          Length = 263

 Score =  220 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 55/248 (22%), Positives = 100/248 (40%), Gaps = 17/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K    +  ++    +      +          +     E+Y K    L+E ++S +  
Sbjct: 1   MRKIKSLVLIALTSFAIAACSSGNKE-------VEQASVDELYAKGAAALQEGSYSDSIR 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
           Y    +  FP +    +++L   +  Y    Y       + ++ Q+P+S N DY  Y+ G
Sbjct: 54  YLKAATERFPGSTYQEQAMLDLIYANYKTQDYTATLVTVDNFLQQFPQSPNRDYAVYMAG 113

Query: 139 MSYA----QMIRDVPYDQRATKL------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++       MI+D     RAT+              +V  + NSPY + A   +   ++ 
Sbjct: 114 LTNLATADNMIQDFFGIDRATRETTSMKTAFSNFQSLVRAFPNSPYSQDAVARMAYIKDS 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E+EI ++Y KR  +VA   R   +L  Y DA+   E +  + EAY  + L   A +
Sbjct: 174 LARHELEIAKFYAKRDAWVAVSNRVVGMLQQYPDAKATYEGLFLMKEAYEKMGLQQLANQ 233

Query: 249 VVSLIQER 256
              +I   
Sbjct: 234 TQQVIDAN 241


>gi|145635281|ref|ZP_01790984.1| conserved hypothetical lipoprotein [Haemophilus influenzae PittAA]
 gi|145267425|gb|EDK07426.1| conserved hypothetical lipoprotein [Haemophilus influenzae PittAA]
          Length = 262

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 60/231 (25%), Positives = 101/231 (43%), Gaps = 17/231 (7%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
           +G     S+DV   SV       E+Y K    L+E ++S+A  Y    +  FP +    +
Sbjct: 17  IGCSS-GSKDVEQASV------NELYTKGTTSLQEGSYSEAIRYLKATTERFPSSVYQEQ 69

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA----QMIRDVPYD 151
           ++L   +  Y    Y Q   + + ++ Q+P+S N  Y  Y+ G++ A      I+D    
Sbjct: 70  AMLDLIYANYKTQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNFIQDFFGI 129

Query: 152 QRATKL------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
            RAT+              +V  + NSPY + A   +   ++ LA  E+EI ++Y KR  
Sbjct: 130 DRATRETTSMRTAFSNFQNLVRVFPNSPYAQDALARMAYIKDALARHELEIAKFYAKRKA 189

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           +VA   R   +L  Y D +   E +  + EAY  + L   A +   +I   
Sbjct: 190 WVAVANRVVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKIIDAN 240


>gi|118594977|ref|ZP_01552324.1| putative competence lipoprotein precursor [Methylophilales
           bacterium HTCC2181]
 gi|118440755|gb|EAV47382.1| putative competence lipoprotein precursor [Methylophilales
           bacterium HTCC2181]
          Length = 272

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 56/242 (23%), Positives = 111/242 (45%), Gaps = 16/242 (6%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
            CF+ G   +          T  R   E+   A +F   +++ +  E+  +  + FP + 
Sbjct: 20  GCFIFGEPTEFDE-------TMGRTDAEIVRGAEVFSANKDWQRTIEWLEKAEKRFPNSP 72

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA--------- 142
           +A +  L  A+   +  + ++A ++ +++I  YP    +DY YYL G+            
Sbjct: 73  LAPQIKLNLAYAYKNFYRDEEALAMLDKFIRTYPNHPALDYAYYLKGVVLFVDRGIVEEL 132

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
            +      D    +   + + ++V  +  S Y + A   +T   N+++ +E+ + RYY++
Sbjct: 133 TLQDISDRDVSQLEGAFKALKQMVRLFPESEYAEDATNRMTYLMNKISERELHVARYYMR 192

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           R  YV A+ R + VL NYS + H EEA+  +V AY  L + D A +   ++   +P   +
Sbjct: 193 REAYVGALNRAKFVLENYSQSIHQEEALVIMVSAYNKLGIFDLAEDTKRVLDLNFPDTQF 252

Query: 263 AR 264
            +
Sbjct: 253 RK 254


>gi|326796214|ref|YP_004314034.1| outer membrane assembly lipoprotein YfiO [Marinomonas mediterranea
           MMB-1]
 gi|326546978|gb|ADZ92198.1| outer membrane assembly lipoprotein YfiO [Marinomonas mediterranea
           MMB-1]
          Length = 280

 Score =  219 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 54/240 (22%), Positives = 107/240 (44%), Gaps = 17/240 (7%)

Query: 33  CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
             L     Q+ R+  L        ++E Y+KA   L     + A ++    +  +PF   
Sbjct: 18  SILSACSNQTVREPDLP-------EQEYYDKAQEALDNGLPATAVKHLKDLTARYPFGDF 70

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ--------- 143
           + ++ L   + QY +G Y  + +  E +I  + +S  +DY YY+ G+S  +         
Sbjct: 71  STRAELDLIYAQYESGDYIASHATAERFIRNHLDSDALDYAYYMRGLSTYKGAETFLGRY 130

Query: 144 -MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
             +     D    +      +  + R+  SPY   A+  +   RN +A  E+++  YY K
Sbjct: 131 LDLNPAERDAHEFEKAFGEFADFLARFPKSPYAVDAKARMIYLRNTVADHELQVAHYYFK 190

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           R   ++A+ R Q V+ +Y  +   EEA+A  ++AY+ +   + A+  + ++ + YP   +
Sbjct: 191 RHAPISALRRAQEVIQHYPSSNSVEEAIAVTIQAYLNMEQYELAKTNLGVLTKNYPNSKY 250



 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 37/122 (30%), Gaps = 22/122 (18%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV--------------QYSAGKYQQAA 114
               F KA+  F      FP +  A  +     ++               +       A 
Sbjct: 139 DAHEFEKAFGEFADFLARFPKSPYAVDAKARMIYLRNTVADHELQVAHYYFKRHAPISAL 198

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
              +E I  YP S +V+    +   +Y  M           +L    +  + + Y NS Y
Sbjct: 199 RRAQEVIQHYPSSNSVEEAIAVTIQAYLNM--------EQYELAKTNLGVLTKNYPNSKY 250

Query: 175 VK 176
           + 
Sbjct: 251 ID 252


>gi|167855785|ref|ZP_02478538.1| putative lipoprotein [Haemophilus parasuis 29755]
 gi|219871127|ref|YP_002475502.1| DNA uptake lipoprotein, TPR repeat-containing protein [Haemophilus
           parasuis SH0165]
 gi|167853064|gb|EDS24325.1| putative lipoprotein [Haemophilus parasuis 29755]
 gi|219691331|gb|ACL32554.1| DNA uptake lipoprotein, TPR repeat-containing protein [Haemophilus
           parasuis SH0165]
          Length = 259

 Score =  219 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 56/248 (22%), Positives = 110/248 (44%), Gaps = 16/248 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + KF       +A   +VG       +       +    +E+Y+K   +L++ +++ A  
Sbjct: 1   MRKFYSLASLVLAGLLVVGCSGSKKDEF------EGIPSQELYDKGQAYLQDGDYNNAIR 54

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
           Y +             +  L   +  Y  G+Y +A  + E +   +P S ++DYVYYL G
Sbjct: 55  YLDAVDLRSNQGAYDEQVQLSLIYANYKLGEYYKALEVAERFARTHPNSSSMDYVYYLAG 114

Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++YA++          I          +        I  +Y NS Y   A+ ++   +N+
Sbjct: 115 LNYARLGDNWIQDFFGINRASRAIENIRNAYGNFQTITFQYPNSQYTSDAQNWMIYLKNR 174

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E++I  +Y++R  YVA + R   +L  Y D +   +A+  L  ++ A+ + D A++
Sbjct: 175 LAEHELKIAEFYMERKAYVAVVNRVDEMLRLYPDTQATYQALPLLKTSFEAMGIKDSAQK 234

Query: 249 VVSLIQER 256
           +  +I+E 
Sbjct: 235 ISEMIKEN 242


>gi|332290083|ref|YP_004420935.1| outer membrane protein assembly complex subunit YfiO
           [Gallibacterium anatis UMN179]
 gi|330432979|gb|AEC18038.1| outer membrane protein assembly complex subunit YfiO
           [Gallibacterium anatis UMN179]
          Length = 267

 Score =  219 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 64/257 (24%), Positives = 117/257 (45%), Gaps = 21/257 (8%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
            + K  +    +++   L      S   V    V+      E+Y+KA  +L+++N+ +A 
Sbjct: 2   HMNKIKVIAVTALSALVLSACSNSSKEQVEQAPVS------ELYQKAQEYLQDENYRQAI 55

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
            Y       FP+   A+++ L   +  Y    Y    S  E Y+ +YP+  ++DYV Y+ 
Sbjct: 56  RYLEATDNRFPYGEYAQQADLNLIYAYYRNEDYVNTLSTAERYLQKYPQGPHLDYVLYIA 115

Query: 138 GMSYAQMIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           G++   +  ++  D           +  +        +V  + NS Y   A+  ++  R 
Sbjct: 116 GLTNMALGDNLFQDFFGVERSSRETKPREDAYHNFETLVRYFPNSEYTPDAKQRMSYIRE 175

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQ-LVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
            LA  + EI  +YLKR  YVA + R Q  +L  Y D  +A +A+  L +AY AL L  +A
Sbjct: 176 SLAKHQYEIAEFYLKRDAYVAVVNRIQDNLLRLYPDTSYAYKALPMLQQAYAALHLDKQA 235

Query: 247 REVVSLI----QERYPQ 259
           +E+  ++    Q+ +P+
Sbjct: 236 QEIAQVLANSKQKEFPE 252


>gi|58617537|ref|YP_196736.1| hypothetical protein ERGA_CDS_08100 [Ehrlichia ruminantium str.
           Gardel]
 gi|58417149|emb|CAI28262.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Gardel]
          Length = 250

 Score =  218 bits (557), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 76/248 (30%), Positives = 123/248 (49%), Gaps = 3/248 (1%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
            Y L K    I   I+  F+V     S   V      + R    +YE A+     + +  
Sbjct: 1   MYHL-KVFKNILVLISCLFIVSCVFLSKERVV--KSVENRTADGIYESALKKSSNKQYKD 57

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A +   +    +PF+ VA K+ +M +F+ Y    Y +AA+  E+YI  YP+S+++D  YY
Sbjct: 58  AVKDLEEIDSLYPFSPVAIKARIMMSFLNYELENYSRAATYAEDYINLYPDSEDIDVAYY 117

Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           L  M+    I D+  DQ     + + +   V  + NS Y++     + +    +AAKE  
Sbjct: 118 LRIMANYMQINDIDRDQSVAYKVSELLDEFVRLFPNSQYLEEVNLRLNMVHEHIAAKEFS 177

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           IG++YL+RGEYVAAI RF  +L  Y +  +  E++ R  EAY++L   D  ++ +SL+QE
Sbjct: 178 IGKFYLQRGEYVAAIRRFSTILKRYKNTRYFPESVYRTAEAYLSLGDKDAYKKYISLLQE 237

Query: 256 RYPQGYWA 263
                 W 
Sbjct: 238 CCVGSEWY 245


>gi|325577680|ref|ZP_08147955.1| competence lipoprotein ComL [Haemophilus parainfluenzae ATCC 33392]
 gi|325160425|gb|EGC72551.1| competence lipoprotein ComL [Haemophilus parainfluenzae ATCC 33392]
          Length = 273

 Score =  218 bits (557), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 64/258 (24%), Positives = 108/258 (41%), Gaps = 20/258 (7%)

Query: 9   ICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL 68
           + I E    ++   AL    S A+          +++V   SV D      +Y K    L
Sbjct: 4   VKIKEKRMRKIKSLALIALTSFAIAAC----SSGNKEVEQASVDD------LYAKGAAAL 53

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           +E ++S +  Y    +  FP +    +++L   +  Y    Y       + Y+ Q+P+S 
Sbjct: 54  QEGSYSDSIRYLKAATERFPGSTYQEQAMLDLIYANYKTQDYTATLVTVDNYLHQFPQSP 113

Query: 129 NVDYVYYLVGMSYA----QMIRDVPYDQRATKL------MLQYMSRIVERYTNSPYVKGA 178
           N DY  Y+ G++       MI+D     RAT+              +V  + NSPY + A
Sbjct: 114 NRDYAVYMAGLTNLATADNMIQDFFGIDRATRETTSMKTAFSNFQSLVRAFPNSPYSQDA 173

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
              +   ++ LA  E+EI ++Y KR  +VA   R   +L  Y DA+   E +  + EAY 
Sbjct: 174 VARMAYIKDSLARHELEIAKFYAKRDAWVAVANRVVGMLQQYPDAKATYEGLFLMKEAYE 233

Query: 239 ALALMDEAREVVSLIQER 256
            + L   A +   +I   
Sbjct: 234 KMGLQQLASQTQQVIDAN 251


>gi|57239503|ref|YP_180639.1| hypothetical protein Erum7760 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58579484|ref|YP_197696.1| hypothetical protein ERWE_CDS_08200 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|57161582|emb|CAH58510.1| putative exported lipoprotein [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58418110|emb|CAI27314.1| Conserved hypothetical protein [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 250

 Score =  218 bits (557), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 76/248 (30%), Positives = 123/248 (49%), Gaps = 3/248 (1%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
            Y L K    I   I+  F+V     S   V      + R    +YE A+     + +  
Sbjct: 1   MYHL-KVFKNILVLISCLFIVSCAFLSKERVV--KSVENRTADGIYESALKKSSNKQYKD 57

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A +   +    +PF+ VA K+ +M +F+ Y    Y +AA+  E+YI  YP+S+++D  YY
Sbjct: 58  AVKDLEEIDSLYPFSPVAIKARIMMSFLNYELENYSRAATYAEDYINLYPDSEDIDVAYY 117

Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           L  M+    I D+  DQ     + + +   V  + NS Y++     + +    +AAKE  
Sbjct: 118 LRIMANYMQINDIDRDQSVAYKVSELLDEFVRLFPNSQYLEEVNLRLNMVHEHIAAKEFS 177

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           IG++YL+RGEYVAAI RF  +L  Y +  +  E++ R  EAY++L   D  ++ +SL+QE
Sbjct: 178 IGKFYLQRGEYVAAIRRFSTILKRYKNTRYFPESVYRTAEAYLSLGDKDAYKKYISLLQE 237

Query: 256 RYPQGYWA 263
                 W 
Sbjct: 238 CCVGSEWY 245


>gi|297184481|gb|ADI20595.1| DNA uptake lipoprotein [uncultured gamma proteobacterium
           EBAC_27G05]
          Length = 272

 Score =  218 bits (555), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 49/249 (19%), Positives = 93/249 (37%), Gaps = 19/249 (7%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
            +  FA+     + + FL G           D     + ++  Y+ A   ++  NF  A 
Sbjct: 7   NIRTFAIF-TVILPMLFLSGCNS--------DGPVVEQPEKVYYDLAQRRMQANNFFSAI 57

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           E        +PF   A ++     +  +  G+ + +    E++I   P   N+DY Y++ 
Sbjct: 58  EALQAIESRYPFGRYAEQAQSELIYAYFMNGEDEASHEAAEKFIRLNPRHPNIDYAYFMK 117

Query: 138 GMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           G++     + +            D    K     +S  + R+  S Y   A   +   R+
Sbjct: 118 GIASYTRDKGMFARVFKSDLSNRDISGAKQAFSELSEFLTRFPQSQYAPYASQRLIYLRS 177

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
            +A  E+    YY+KR  YVAA+ R   V+ N  +      A+  + + Y  L       
Sbjct: 178 LIAKSELVAADYYMKRKAYVAALRRANYVIENIPNTSETIRALKVVRDCYRELGYFKLMD 237

Query: 248 EVVSLIQER 256
           ++  +I   
Sbjct: 238 DIQKIIDAN 246


>gi|16272142|ref|NP_438345.1| hypothetical protein HI0177 [Haemophilus influenzae Rd KW20]
 gi|260580942|ref|ZP_05848766.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
 gi|1175182|sp|P44553|Y177_HAEIN RecName: Full=Putative UPF0169 lipoprotein HI_0177; Flags:
           Precursor
 gi|1573134|gb|AAC21847.1| lipoprotein, putative [Haemophilus influenzae Rd KW20]
 gi|260092431|gb|EEW76370.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
          Length = 262

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 59/231 (25%), Positives = 100/231 (43%), Gaps = 17/231 (7%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
           +G     S+DV   SV       E+Y K    L+E ++S+A  Y    +  FP +    +
Sbjct: 17  IGCSS-GSKDVEQASV------NELYTKGTTSLQEGSYSEAIRYLKATTERFPGSVYQEQ 69

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA----QMIRDVPYD 151
           ++L   +  Y    Y Q   + + ++ Q+ +S N  Y  Y+ G++ A      I+D    
Sbjct: 70  AMLDLIYANYKTQDYTQVLLMVDSFLHQFTQSPNQAYAVYMAGLTNAATGDNFIQDFFGI 129

Query: 152 QRATKL------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
            RAT+              +V  + NSPY + A   +   ++ LA  E+EI ++Y KR  
Sbjct: 130 DRATRETTSMRTAFSNFQNLVRVFPNSPYSQDALARMAYIKDALARHELEIAKFYAKRKA 189

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           +VA   R   +L  Y D +   E +  + EAY  + L   A +   +I   
Sbjct: 190 WVAVANRVVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKIIDAN 240


>gi|326570228|gb|EGE20273.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis BC8]
          Length = 356

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 11/247 (4%)

Query: 24  LTIFFSIAVCFLVGWERQSSR-DVYLDSV-TDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
           L      A   + G +  +   D   D+V T  +     Y++A   L +     A E  N
Sbjct: 7   LIAAMMAATLTVTGCQSVNGLFDRKADTVETAEKTDAAYYQEASEALDKNQNRNAIEALN 66

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
                +P    A+++LL   + QY A  ++      EE+I +YP S++VDY  Y+ G+++
Sbjct: 67  NIRTFYPTGQYAQQALLDLIYAQYKANDFEAVLQSTEEFIHRYPNSRSVDYALYVQGVTH 126

Query: 142 AQ---------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
                             D    +L  +    +++ Y +SPYV  A   +    N  A  
Sbjct: 127 MGGAPKASRLVRFDQSHRDVTYLRLAFRDFQNLLKHYPDSPYVADAAQRMIAIYNDFAEH 186

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           E+   R+Y+KR   VAA  R + V   Y  +    EA+A L  +   L L + A++   L
Sbjct: 187 ELAAARWYVKRDAMVAAANRAKWVFQYYPQSTGVPEAIAILAYSNQKLGLTETAKQYKQL 246

Query: 253 IQERYPQ 259
           +Q  YPQ
Sbjct: 247 LQINYPQ 253


>gi|326565267|gb|EGE15452.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis 12P80B1]
 gi|326575839|gb|EGE25762.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis CO72]
          Length = 356

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 11/247 (4%)

Query: 24  LTIFFSIAVCFLVGWERQSSR-DVYLDSV-TDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
           L      A   + G +  +   D   D+V T  +     Y++A   L +     A E  N
Sbjct: 7   LIAAMMAATLTVTGCQSVNGLFDRKADTVETAEKTDAAYYQEASEALDKNQNRNAIEALN 66

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
                +P    A+++LL   + QY A  ++      EE+I +YP S++VDY  Y+ G+++
Sbjct: 67  NIRTFYPTGQYAQQALLDLIYAQYKANDFEAVLQSTEEFIHRYPNSRSVDYALYVQGVTH 126

Query: 142 AQ---------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
                             D    +L  +    +++ Y +SPYV  A   +    N  A  
Sbjct: 127 MGGAPKASRLVRFDQSHRDVTYLRLAFRDFQNLLKHYPDSPYVADAAQRMIAIYNDFAEH 186

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           E+   R+Y+KR   VAA  R + V   Y  +    EA+A L  +   L L + A++   L
Sbjct: 187 ELAAARWYVKRDAMVAAANRAKWVFQYYPQSTGVPEAIAILAYSNQKLGLTETAKQYKQL 246

Query: 253 IQERYPQ 259
           +Q  YPQ
Sbjct: 247 LQINYPQ 253


>gi|326562906|gb|EGE13193.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis 46P47B1]
 gi|326563653|gb|EGE13905.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis
           103P14B1]
 gi|326573261|gb|EGE23229.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis
           101P30B1]
          Length = 356

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 11/247 (4%)

Query: 24  LTIFFSIAVCFLVGWERQSSR-DVYLDSV-TDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
           L      A   + G +  +   D   D+V T  +     Y++A   L +     A E  N
Sbjct: 7   LIAAMMAATLTVTGCQSVNGLFDRKADTVETAEKTDAAYYQEASEALDKNQNRNAIEALN 66

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
                +P    A+++LL   + QY A  ++      EE+I +YP S++VDY  Y+ G+++
Sbjct: 67  NIRTFYPTGQYAQQALLDLIYAQYKANDFEAVLQSTEEFIHRYPNSRSVDYALYVQGVTH 126

Query: 142 AQ---------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
                             D    +L  +    +++ Y +SPYV  A   +    N  A  
Sbjct: 127 MGGAPKASRLVRFDQSHRDVTYLRLAFRDFQNLLKHYPDSPYVADAAQRMIAIYNDFAEH 186

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           E+   R+Y+KR   VAA  R + V   Y  +    EA+A L  +   L L + A++   L
Sbjct: 187 ELAAARWYVKRDAMVAAANRAKWVFQYYPQSTGVPEAIAILAYSNQKLGLTETAKQYKQL 246

Query: 253 IQERYPQ 259
           +Q  YPQ
Sbjct: 247 LQINYPQ 253


>gi|296113273|ref|YP_003627211.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis RH4]
 gi|295920967|gb|ADG61318.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis RH4]
 gi|326570965|gb|EGE20989.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis BC7]
          Length = 356

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 11/247 (4%)

Query: 24  LTIFFSIAVCFLVGWERQSSR-DVYLDSV-TDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
           L      A   + G +  +   D   D+V T  +     Y++A   L +     A E  N
Sbjct: 7   LIAAMMAATLTVTGCQSVNGLFDRKADTVETAEKTDAAYYQEASEALDKNQNRNAIEALN 66

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
                +P    A+++LL   + QY A  ++      EE+I +YP S++VDY  Y+ G+++
Sbjct: 67  NIRTFYPTGQYAQQALLDLIYAQYKANDFEAVLQSTEEFIHRYPNSRSVDYALYVQGVTH 126

Query: 142 AQ---------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
                             D    +L  +    +++ Y +SPYV  A   +    N  A  
Sbjct: 127 MGGAPKASRLVRFDQSHRDVTYLRLAFRDFQNLLKHYPDSPYVADAAQRMIAIYNDFAEH 186

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           E+   R+Y+KR   VAA  R + V   Y  +    EA+A L  +   L L + A++   L
Sbjct: 187 ELAAARWYVKRDAMVAAANRAKWVFQYYPQSTGVPEAIAILAYSNQKLGLTETAKQYKQL 246

Query: 253 IQERYPQ 259
           +Q  YPQ
Sbjct: 247 LQINYPQ 253


>gi|326560262|gb|EGE10650.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis 7169]
 gi|326566420|gb|EGE16570.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis BC1]
          Length = 356

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 11/247 (4%)

Query: 24  LTIFFSIAVCFLVGWERQSSR-DVYLDSV-TDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
           L      A   + G +  +   D   D+V T  +     Y++A   L +     A E  N
Sbjct: 7   LIAAMMAATLTVTGCQSVNGLFDRKADTVETAEKTDAAYYQEASEALDKNQNRNAIEALN 66

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
                +P    A+++LL   + QY A  ++      EE+I +YP S++VDY  Y+ G+++
Sbjct: 67  NIRTFYPTGQYAQQALLDLIYAQYKANDFEAVLQSTEEFIHRYPNSRSVDYALYVQGVTH 126

Query: 142 AQ---------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
                             D    +L  +    +++ Y +SPYV  A   +    N  A  
Sbjct: 127 MGGAPKASRLVRFDQSHRDVTYLRLAFRDFQNLLKHYPDSPYVADAAQRMIAIYNDFAEH 186

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           E+   R+Y+KR   VAA  R + V   Y  +    EA+A L  +   L L + A++   L
Sbjct: 187 ELAAARWYVKRDAMVAAANRAKWVFQYYPQSTGVPEAIAILAYSNQKLGLTETAKQYKQL 246

Query: 253 IQERYPQ 259
           +Q  YPQ
Sbjct: 247 LQINYPQ 253


>gi|32035196|ref|ZP_00135230.1| COG4105: DNA uptake lipoprotein [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126208591|ref|YP_001053816.1| putative lipoprotein [Actinobacillus pleuropneumoniae L20]
 gi|165976547|ref|YP_001652140.1| putative lipoprotein [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|303250130|ref|ZP_07336332.1| putative lipoprotein [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|303253304|ref|ZP_07339453.1| putative lipoprotein [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|307246036|ref|ZP_07528118.1| hypothetical protein appser1_12390 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307248144|ref|ZP_07530172.1| hypothetical protein appser2_11250 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|307250377|ref|ZP_07532325.1| hypothetical protein appser4_11570 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|307252759|ref|ZP_07534650.1| hypothetical protein appser6_12730 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307255018|ref|ZP_07536836.1| hypothetical protein appser9_12520 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307257174|ref|ZP_07538946.1| hypothetical protein appser10_11740 [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|307259454|ref|ZP_07541179.1| hypothetical protein appser11_12510 [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|307261603|ref|ZP_07543271.1| hypothetical protein appser12_11640 [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|126097383|gb|ABN74211.1| putative lipoprotein [Actinobacillus pleuropneumoniae serovar 5b
           str. L20]
 gi|165876648|gb|ABY69696.1| conserved putative lipoprotein [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|302647986|gb|EFL78193.1| putative lipoprotein [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|302651193|gb|EFL81347.1| putative lipoprotein [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306852971|gb|EFM85194.1| hypothetical protein appser1_12390 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306855321|gb|EFM87496.1| hypothetical protein appser2_11250 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306857587|gb|EFM89695.1| hypothetical protein appser4_11570 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306859791|gb|EFM91813.1| hypothetical protein appser6_12730 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306861891|gb|EFM93867.1| hypothetical protein appser9_12520 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306864336|gb|EFM96247.1| hypothetical protein appser10_11740 [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306866390|gb|EFM98253.1| hypothetical protein appser11_12510 [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306868726|gb|EFN00535.1| hypothetical protein appser12_11640 [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 258

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 58/263 (22%), Positives = 118/263 (44%), Gaps = 21/263 (7%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + KF       +A   +VG    +          +    +++Y K   +L++ +++ A  
Sbjct: 1   MRKFTSLASLVLAGLLVVGCSSANKE-------LEETSAQDLYTKGQTYLQDGDYNSAIR 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
           Y +             ++ L   F  Y  G+Y +A    E ++  YP S ++DYVYYL G
Sbjct: 54  YLDAIGAKGGQGTFGEQTQLSLIFANYKIGEYYKALDAAERFVRAYPNSASMDYVYYLAG 113

Query: 139 MSYAQMIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +S A++  +   D            + +        IV+ Y  S Y + A+ ++    N+
Sbjct: 114 LSNARLGDNFIQDFFGVNRASRALDSVRNAYGSFQTIVQHYPQSQYARDAQNWMAYLINR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           +A  E+ I ++Y +R  YVA + R + ++  Y +++   +A++ + +AY  + + D A +
Sbjct: 174 MAEHELSIVKFYDEREAYVAVVNRVEEMMRFYPESKPTYQALSYMQKAYEQMGVKDSAEK 233

Query: 249 VVSLIQ----ERYPQGYWARYVE 267
           V +LI+    + +P+     Y E
Sbjct: 234 VAALIEANKDKNFPEAIKPEYSE 256


>gi|326576922|gb|EGE26828.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis O35E]
          Length = 356

 Score =  215 bits (549), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 11/247 (4%)

Query: 24  LTIFFSIAVCFLVGWERQSSR-DVYLDSV-TDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
           L      A   + G +  +   D   D+V T  +     Y++A   L +     A E  N
Sbjct: 7   LIAAMMAATLTVTGCQSVNGLFDRKADTVETAEKTDAAYYQEASEALDKNQNRNAIEALN 66

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
                +P    A+++LL   + QY A  ++      EE+I +YP S++VDY  Y+ G+++
Sbjct: 67  NIRTFYPTGQYAQQALLDLIYAQYKANDFEAVLQSTEEFIHRYPNSRSVDYALYVQGVTH 126

Query: 142 AQ---------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
                             D    +L  +    +++ Y +SPYV  A   +    N  A  
Sbjct: 127 MGGAPKASRLVRFDQSHRDVTYLRLAFRDFQNLLKHYPDSPYVADAAQRMIAIYNDFAEH 186

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           E+   R+Y+KR   VAA  R + V   Y  +    EA+A L  +   L L + A++   L
Sbjct: 187 ELAAARWYVKRDAMVAAANRAKWVFQYYPQSTGVPEAIAILAYSNQKLGLTETAKQYKHL 246

Query: 253 IQERYPQ 259
           +Q  YPQ
Sbjct: 247 LQINYPQ 253


>gi|119713311|gb|ABL97375.1| predicted secreted competence lipoprotein [uncultured marine
           bacterium EB80_02D08]
          Length = 272

 Score =  215 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 49/246 (19%), Positives = 96/246 (39%), Gaps = 18/246 (7%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L +   I    LV            D     + ++  Y++A   +  +N+  A E     
Sbjct: 9   LFLVVPIVTLLLVSCNS--------DGPEIEQPEKIYYDQAQRRIAAKNYFGAIESLEAI 60

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +PF   + ++ +   +VQ+   + + A +  E++I  +P   N+DY Y++ G+S   
Sbjct: 61  ETRYPFGKYSEQAQVELIYVQFMNAETEAAHAAAEKFIRLHPRHPNIDYAYFMKGLSSYT 120

Query: 144 MIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
                            D    K     ++  + R+ +S Y   A+      RN +A  E
Sbjct: 121 RDNSFIVRMTDTDLSNRDISGAKESFSELTEFLTRFPDSQYATYAKQRNIYLRNMIARNE 180

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +    YY+    ++AAI R   V+ N  ++     A+  L E+Y +L  ++   +   +I
Sbjct: 181 LAAADYYVSVDAHIAAIRRANYVIENIPNSSENYRALKILEESYDSLGYVELLEDTRKII 240

Query: 254 QERYPQ 259
              Y  
Sbjct: 241 TLNYKD 246


>gi|254468028|ref|ZP_05081434.1| competence lipoprotein ComL [beta proteobacterium KB13]
 gi|207086838|gb|EDZ64121.1| competence lipoprotein ComL [beta proteobacterium KB13]
          Length = 268

 Score =  215 bits (548), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 63/245 (25%), Positives = 108/245 (44%), Gaps = 11/245 (4%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           +   I+  FL G         + +  T  +    +Y KA  F  +++F K  +Y  +  +
Sbjct: 5   LTLFISSIFLAGCFIFGEPTEFDE--TTGQSPEWIYGKAEAFTDQRDFRKTIDYLEKLVK 62

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-- 143
            +P   +   + L  A+  Y  G+ + + S   ++IT YP   ++DY YYL G++  Q  
Sbjct: 63  RYPDNKLIPSARLNLAYAYYKFGQKELSTSTVNQFITLYPSHPSMDYAYYLKGLNLYQER 122

Query: 144 -------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
                  M      D    K      S +V++Y NS Y + +   +    N++A  ++ +
Sbjct: 123 GIINKLTMQDISDRDVNNLKQAFDAFSELVKKYPNSKYSQDSTDRMIYLMNKIAEYDLHV 182

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            RYY+KR  YVAA+ R + V   Y ++ H EE++     AY  L L D       +I   
Sbjct: 183 ARYYMKRRAYVAALNRAKNVYTTYPESIHVEESLVIQYIAYKELKLKDLEIATKKVIDLN 242

Query: 257 YPQGY 261
           YP+  
Sbjct: 243 YPENK 247



 Score = 39.7 bits (92), Expect = 0.44,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 47/133 (35%), Gaps = 31/133 (23%)

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
           DQR  +  + Y+ ++V+RY ++  +  AR  +     +   KE+             + +
Sbjct: 46  DQRDFRKTIDYLEKLVKRYPDNKLIPSARLNLAYAYYKFGQKELS-----------TSTV 94

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEA-YVALALMD----------------EAREVVSLI 253
            +F   +  Y      + A        Y    +++                +A +  S +
Sbjct: 95  NQF---ITLYPSHPSMDYAYYLKGLNLYQERGIINKLTMQDISDRDVNNLKQAFDAFSEL 151

Query: 254 QERYPQGYWARYV 266
            ++YP   +++  
Sbjct: 152 VKKYPNSKYSQDS 164


>gi|190150448|ref|YP_001968973.1| lipoprotein [Actinobacillus pleuropneumoniae serovar 7 str. AP76]
 gi|307263792|ref|ZP_07545398.1| hypothetical protein appser13_12030 [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|189915579|gb|ACE61831.1| putative lipoprotein [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|306870913|gb|EFN02651.1| hypothetical protein appser13_12030 [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 258

 Score =  215 bits (548), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 58/263 (22%), Positives = 119/263 (45%), Gaps = 21/263 (7%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + KF       +A   +VG    +          +    +++Y K   +L++ +++ A  
Sbjct: 1   MRKFTSLASLVLAGLLVVGCSSANKE-------LEETSAQDLYTKGQTYLQDGDYNSAIR 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
           Y +          +  ++ L   F  Y  G+Y +A    E ++  YP S ++DYVYYL G
Sbjct: 54  YLDAIGAKGGQGTLGEQTQLSLIFANYKIGEYYKALDAAERFVRAYPNSASMDYVYYLAG 113

Query: 139 MSYAQMIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +S A++  +   D            + +        IV+ Y  S Y + A+ ++    N+
Sbjct: 114 LSNARLGDNFIQDFFGVNRASRALDSVRNAYGSFQTIVQHYPQSQYARDAQNWMAYLINR 173

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           +A  E+ I ++Y +R  YVA + R + ++  Y +++   +A++ + +AY  + + D A +
Sbjct: 174 MAEHELSIVKFYDEREAYVAVVNRVEEMMRFYPESKPTYQALSYMQKAYEQMGVKDSAEK 233

Query: 249 VVSLIQ----ERYPQGYWARYVE 267
           V +LI+    + +P+     Y E
Sbjct: 234 VAALIEANKDKNFPEAIKPEYSE 256


>gi|323143513|ref|ZP_08078193.1| outer membrane assembly lipoprotein YfiO [Succinatimonas hippei YIT
           12066]
 gi|322416707|gb|EFY07361.1| outer membrane assembly lipoprotein YfiO [Succinatimonas hippei YIT
           12066]
          Length = 264

 Score =  215 bits (548), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 57/249 (22%), Positives = 102/249 (40%), Gaps = 15/249 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + KF L +    AV          ++D   +   D      +Y  A   +   +F +A +
Sbjct: 12  MIKFFLPLIVGAAVALTACSSANYNKDEVPNIAPDA-----MYSVAQNAMASGDFQRAKQ 66

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
           Y       +PF  +A +  L   +V Y     ++ ++    ++   P S+  DYV Y+ G
Sbjct: 67  YLEAIDSRYPFGELADQVQLDLIYVYYKMRDSEKTSAQINRFMRLNPTSQYTDYVMYMTG 126

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++  QM  D+            D       L+    ++E Y  S Y   A   +   + Q
Sbjct: 127 LNQIQMRSDILQDFIGLNRSQKDPTQYYEALKTFRNLIETYPESKYAADAHQRMIFIKQQ 186

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA +E+ I  YY +RG Y++ I   Q +L +Y   ++ E A+A +   Y  L L + A  
Sbjct: 187 LAEREMAIANYYYERGSYLSTIRHCQNILYSYRGTQYLEPALALMARCYDDLGLPEAAAN 246

Query: 249 VVSLIQERY 257
             S+ +  +
Sbjct: 247 ARSVQEASF 255


>gi|330974765|gb|EGH74831.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 174

 Score =  214 bits (547), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 47/174 (27%), Positives = 77/174 (44%), Gaps = 10/174 (5%)

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   A ++ L   +  Y  G+ + A S  E +I  +P+  NVDY YY+ G
Sbjct: 1   KLKALESRYPFGRYADQAQLELIYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKG 60

Query: 139 MSYAQMI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++                    D  A +      +++  R+ NS Y   A+  +   RN 
Sbjct: 61  LTSFDQDVGLLARFLPLDQTKRDPGAARDSFNEFAQLTSRFPNSRYAPDAKQRMIYLRNL 120

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
           LA+ E+ +  YYL R  YVAA  R + V+ N+ +     + +A +VE+Y  L L
Sbjct: 121 LASYEIHVADYYLTRQAYVAAANRGRYVVENFQETPSVGDGLAVMVESYQRLHL 174


>gi|9971938|gb|AAG10500.1|AF279106_62 predicted secreted lipoprotein [uncultured marine gamma
           proteobacterium EBAC31A08]
          Length = 272

 Score =  214 bits (547), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 48/253 (18%), Positives = 95/253 (37%), Gaps = 18/253 (7%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
             L I   I    LV            D     + ++  Y++A   +  +N+  A +   
Sbjct: 7   LKLFIVLPIVTLLLVSCNS--------DGPEIEQPEKIYYDQAQRRMAGKNYFGAIDSLE 58

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
                +PF   A ++ +   + Q+   + + A +  E++I  +P   N+DY Y++ G+S 
Sbjct: 59  AIESRYPFGKYAEQAQVELIYAQFMNAETEAAHAAAEKFIRLHPRHPNIDYAYFMKGLSS 118

Query: 142 AQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
                              D    K     ++  + R+ +S Y   A+      RN +A 
Sbjct: 119 YTRDNSFIVRMTDTDLSNRDISGAKESFSELTEFLTRFPDSQYSTYAKQRNIYLRNMIAR 178

Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
            E+    YY+    ++AAI R   V+ N  ++     A+  L  +Y +L  ++   +   
Sbjct: 179 NELAAADYYVSVDAHIAAIRRANYVIENIPNSSENYRALKILEASYESLGYIELLEDTKK 238

Query: 252 LIQERYPQGYWAR 264
           +I   Y      +
Sbjct: 239 IISINYQDEQSKK 251


>gi|153215113|ref|ZP_01949820.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|124114904|gb|EAY33724.1| conserved hypothetical protein [Vibrio cholerae 1587]
          Length = 214

 Score =  214 bits (547), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 44/189 (23%), Positives = 79/189 (41%), Gaps = 10/189 (5%)

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
                    +PF   + +  L   +  Y         +  E +    P  + +D+V Y+ 
Sbjct: 24  RKLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMR 83

Query: 138 GMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           G+++    R+             D    K       ++++RY NSPY + A+  +   +N
Sbjct: 84  GLTHMAQDRNFMHDLFNIDRRDRDPEPVKAAFADFKKLLQRYPNSPYAEDAQRRMFALKN 143

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
           +LA  ++    +YL+R  ++AAI R Q +   Y D E A +++A  +EAY  L L D   
Sbjct: 144 RLAEYDLATADFYLRREAWIAAINRTQELQKTYPDTEAARKSLAIQLEAYQQLGLTDAIE 203

Query: 248 EVVSLIQER 256
               L+Q  
Sbjct: 204 RTKQLMQLN 212


>gi|114775489|ref|ZP_01451057.1| probable transmembrane protein [Mariprofundus ferrooxydans PV-1]
 gi|114553600|gb|EAU55981.1| probable transmembrane protein [Mariprofundus ferrooxydans PV-1]
          Length = 228

 Score =  214 bits (547), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 55/214 (25%), Positives = 99/214 (46%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
            +  YEK+   +   N+++A       S  +P++  A ++ L+  F  Y   ++  +  L
Sbjct: 15  AQRAYEKSKHQVTIGNYAEATMALEHFSSKYPYSKFAIQAELLRIFAAYKDDEFVLSEVL 74

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            + +I  +P   N DY  Y++ MS  +       D    K  ++   +++  + +S Y K
Sbjct: 75  SQRFIDLHPGHANADYAMYMLAMSQYKQRASAEKDPTQNKAAIKSFKKLIREHPDSSYAK 134

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
             + Y+    N LA  E+ IG++Y  R  YVAA  RFQ V+ +Y      EEA+  L  +
Sbjct: 135 QGKMYLQSLYNSLAKHELTIGKFYFDRDRYVAAANRFQQVIQHYQTTPSIEEALYYLASS 194

Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
           Y  + +  +A +   L+Q  YP   W+   E  +
Sbjct: 195 YAKMDMKTDASQTAQLLQHNYPHSSWSSKAERFL 228


>gi|322514977|ref|ZP_08067989.1| DNA uptake lipoprotein [Actinobacillus ureae ATCC 25976]
 gi|322119030|gb|EFX91194.1| DNA uptake lipoprotein [Actinobacillus ureae ATCC 25976]
          Length = 260

 Score =  214 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 58/264 (21%), Positives = 120/264 (45%), Gaps = 21/264 (7%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + KF       +    +VG    +++++      +    +++Y K   +L++ +++ A  
Sbjct: 1   MRKFTSLASLMLVGLLVVGCSNSANKEL------EESSAQDLYTKGQTYLQDGDYNSAIR 54

Query: 79  YFNQCSRDF-PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           Y +         +    ++ L   +  Y  G+Y +A    E ++  YP S ++DYVYYL 
Sbjct: 55  YLDAVGTKGGQQSAFGEQTQLSLIYANYKVGEYYKALDAAERFVRAYPNSASMDYVYYLA 114

Query: 138 GMSYAQMIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           G+S A++  +   D            + +        IV+ Y  S Y + A+ ++    N
Sbjct: 115 GLSNARLGDNFIQDFFGVNRASRALDSVRNAYGSFQTIVQHYPQSKYAQDAKNWMGYLIN 174

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
           ++A  E+ I ++Y  R  YVA + R + ++  Y +++   EA+A + +AY  + + D A 
Sbjct: 175 RMAEHELAIVKFYDDREAYVAVVNRVEEMMRFYPESKPTYEALAYMQKAYEQIGIKDSAE 234

Query: 248 EVVSLIQER----YPQGYWARYVE 267
           +V +LI+      +P+     Y E
Sbjct: 235 KVAALIEANKDKSFPEIIKPEYSE 258


>gi|189426001|ref|YP_001953178.1| outer membrane assembly lipoprotein YfiO [Geobacter lovleyi SZ]
 gi|189422260|gb|ACD96658.1| outer membrane assembly lipoprotein YfiO [Geobacter lovleyi SZ]
          Length = 248

 Score =  212 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 58/253 (22%), Positives = 109/253 (43%), Gaps = 10/253 (3%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           +L ++ L +    A+  L G       D             E+Y +     ++  + +A 
Sbjct: 2   KLLRYRLLVA-GTALLMLQGCASAPKTD---------PTPEELYAQGETAFQKSRYEQAV 51

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           E + +    FP   +A ++ +  A   +    + +A +  E++   +P  +   +  Y  
Sbjct: 52  ESWKKVKETFPEPELAARAEIGIANAYFLNHDFIEAGAAYEDFRKLHPTHELAQFSLYRQ 111

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
           G++   +I  +  DQ  TK  L      + +Y  S YV   +  +   R +LA  E+ +G
Sbjct: 112 GLASFNLITGIDTDQTPTKNALALFESFIRQYPKSQYVAKVQEKIADCRGKLAQYEIYVG 171

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           R+Y +   Y AAI RF+  L N+ D    +E +  L +AY+A    D+A+ V+S +   Y
Sbjct: 172 RFYYRTDNYQAAIGRFEGALTNFPDYTGNDETLFYLAKAYIANRQSDKAQTVLSRLIREY 231

Query: 258 PQGYWARYVETLV 270
           P G +      L+
Sbjct: 232 PTGKYLDDARKLL 244


>gi|91762852|ref|ZP_01264817.1| putative competence lipoprotein ComL [Candidatus Pelagibacter
           ubique HTCC1002]
 gi|91718654|gb|EAS85304.1| putative competence lipoprotein ComL [Candidatus Pelagibacter
           ubique HTCC1002]
          Length = 282

 Score =  210 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 62/236 (26%), Positives = 116/236 (49%)

Query: 33  CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
            F+     ++ +   +  V       + Y++    L+  +   A + FN+    FP +  
Sbjct: 15  TFIWSCGDKTKKISEIVEVDMEMQMSDAYKEGYFELQRGDVLLAAKKFNEAELLFPQSPW 74

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           A KS +M+A+  Y+   Y  A    E Y+  YP  K+  Y ++L+GMS+ + I D   D 
Sbjct: 75  AAKSAIMAAYAYYTQDYYGDAIFELERYLVTYPNHKDKVYAHFLLGMSFYEQIVDEKKDL 134

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           ++     +    ++  Y ++ +   A+F + +    LAAKE+ I RYYLK+ +++ A+ R
Sbjct: 135 KSILDSKEQFETLIRDYPSTEFAMDAKFKIDLINEILAAKEMYIARYYLKKTKWIPALNR 194

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           F+ V+ +Y+   + EEA+ RLVE    L L++E+++  S +   Y    W +    
Sbjct: 195 FKTVVKDYNTTIYTEEALHRLVEINYRLGLINESKKYASTLGYNYQSSDWYKNSYK 250


>gi|332184382|gb|AEE26636.1| Competence protein [Francisella cf. novicida 3523]
          Length = 274

 Score =  209 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 59/256 (23%), Positives = 110/256 (42%), Gaps = 12/256 (4%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +F   I  +  +  L        +D  L  V        +Y KA   ++ + +  A  
Sbjct: 1   MKRFLYLIVITFMLLLLSSCG--PKKDSELPQVYTGYTASFIYAKAHEQMRNEKYFDAIR 58

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            +      +PF  +A K ++   +V Y   +   A +LG+++I  YP S    YVYY++G
Sbjct: 59  SYKSLVAQYPFTPLAEKGMVDLIYVYYMDDESTMALALGQQFIKMYPYSIYKGYVYYMIG 118

Query: 139 MSYAQMIRDVP----------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +   +  R +           +D    +       R ++   N  +V  A+  +    N 
Sbjct: 119 VVGFEDGRGMLQTYAPYDMNYHDPTGYQDAYTNFERAIQLDPNGSFVPDAKRRMVFINNT 178

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           +A    +I  +Y KRG Y AAI R   V+ NY  +   E+A+   + AY  L L D+A+ 
Sbjct: 179 IARHYDDIAHFYFKRGAYNAAIDRASQVIRNYPQSTSTEDALVLTIRAYNKLGLYDQAKA 238

Query: 249 VVSLIQERYPQGYWAR 264
            + ++++ YP+  + +
Sbjct: 239 NIRVLKKNYPKNKFIK 254



 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 29/70 (41%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           ++  +Y  AI  ++ ++A Y     AE+ M  L+  Y        A  +     + YP  
Sbjct: 48  MRNEKYFDAIRSYKSLVAQYPFTPLAEKGMVDLIYVYYMDDESTMALALGQQFIKMYPYS 107

Query: 261 YWARYVETLV 270
            +  YV  ++
Sbjct: 108 IYKGYVYYMI 117


>gi|254449016|ref|ZP_05062470.1| competence protein ComL [gamma proteobacterium HTCC5015]
 gi|198261410|gb|EDY85701.1| competence protein ComL [gamma proteobacterium HTCC5015]
          Length = 261

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 90/251 (35%), Gaps = 17/251 (6%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           +  L I F++    L G               D   +  +Y++A   +    F  A    
Sbjct: 18  RRILFIGFAVTALMLSGCASDIDD-------LDRWDEVRLYQEAKGAMARGEFQTAIRRL 70

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
              +  +PF   A +  L   +  + + + +   S  + +    P    VDY  Y+ G++
Sbjct: 71  ETLNARYPFDDYAIQGQLDLMYAYFKSMRMEDVISTAQRFARLNPTHPKVDYALYMQGLA 130

Query: 141 YAQMIRD-----VPYDQR-----ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
              + +       P D         +      + +V R+ +S Y       +   RNQLA
Sbjct: 131 DFDLNKSFLQRWFPRDPSEYELPVLERSFNAFAELVRRFPDSEYAPDGERRMIYLRNQLA 190

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
              +    +Y++R  +++A  R Q  +  Y+ A   E+A+  +  +Y  L +   A    
Sbjct: 191 EACMSRATWYVRREAWLSAAQRAQQCIQRYNGAPAVEKALGIMANSYEKLDMPQLASATR 250

Query: 251 SLIQERYPQGY 261
           +   +  P   
Sbjct: 251 NRTSQTAPTSK 261


>gi|134301740|ref|YP_001121708.1| lipoprotein [Francisella tularensis subsp. tularensis WY96-3418]
 gi|134049517|gb|ABO46588.1| hypothetical lipoprotein [Francisella tularensis subsp. tularensis
           WY96-3418]
          Length = 274

 Score =  208 bits (531), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 57/256 (22%), Positives = 109/256 (42%), Gaps = 12/256 (4%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +F   I  +  +  L        +D  L  V        +Y KA   ++ Q +  A  
Sbjct: 1   MKRFLYLIIITFMLLLLSSCG--PKKDSELPQVYTGYTASFIYAKAHEQMQNQKYFDAIR 58

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            +      +PF  +A K ++   +V Y   +   A +LG+++I  +P S    YVYY++G
Sbjct: 59  SYKSLVAQYPFTPLAEKGMVDLIYVYYMDDESTMALALGQQFIKMHPYSIYKGYVYYMIG 118

Query: 139 MSYAQMIRDVP----------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +   +  R +           +D    +       + ++      +V  A+  +    N 
Sbjct: 119 VVGFEDGRGMLQTYAPYDMNYHDPTGYQDAYTNFEKAIQLDPTGSFVPDAKRRMIFINNI 178

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           +A    +I  +Y KRG Y AAI R   V+ NY  +   E+A+   + AY  L L D+A+ 
Sbjct: 179 IARHYDDIAHFYFKRGAYNAAIDRASQVIRNYPQSTSTEDALVLTIRAYNKLGLYDQAKA 238

Query: 249 VVSLIQERYPQGYWAR 264
            + ++++ YP+  + +
Sbjct: 239 NIRVLKKNYPKNKFIK 254


>gi|88800778|ref|ZP_01116335.1| competence lipoprotein ComL, putative [Reinekea sp. MED297]
 gi|88776484|gb|EAR07702.1| competence lipoprotein ComL, putative [Reinekea sp. MED297]
          Length = 277

 Score =  208 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 57/247 (23%), Positives = 101/247 (40%), Gaps = 20/247 (8%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           AL +     +  L G     S+D           +   YE A  +L+++N+S A E    
Sbjct: 11  ALRVGLLAVLVALSGCASLPSQDT----------ETAYYETAQEYLEKRNYSMAVERLTA 60

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
               FPF   A  S L   +  Y    +  A    + +     E  +VDY +++  MSY 
Sbjct: 61  LRDRFPFGRYADASALDLMYAYYGMNDFANALVEADRFTRLNSEHPDVDYAWFVRSMSYY 120

Query: 143 QMI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
           ++                     +   + +S+   RY +S Y   A   + + ++ LA  
Sbjct: 121 ELFLTNRGILGKADPAKRSAEQGQKAFRALSQFTARYPDSRYRPEALDAMVILKDALARH 180

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           E+ +  YY++R  ++AA  R + V+ +Y       +A+  L+EAY AL +  +   V+S 
Sbjct: 181 ELVVADYYIRREAWIAAAERAKTVVEHYPGVTAVGDALVVLIEAYDALDMPTDRSLVLSR 240

Query: 253 IQERYPQ 259
           +   YP 
Sbjct: 241 LTNDYPD 247


>gi|56708306|ref|YP_170202.1| lipoprotein [Francisella tularensis subsp. tularensis SCHU S4]
 gi|89256089|ref|YP_513451.1| lipoprotein [Francisella tularensis subsp. holarctica LVS]
 gi|110670777|ref|YP_667334.1| lipoprotein [Francisella tularensis subsp. tularensis FSC198]
 gi|118497848|ref|YP_898898.1| competence lipoprotein ComL [Francisella tularensis subsp. novicida
           U112]
 gi|167010774|ref|ZP_02275705.1| competence lipoprotein ComL [Francisella tularensis subsp.
           holarctica FSC200]
 gi|169656566|ref|YP_001428171.2| lipoprotein [Francisella tularensis subsp. holarctica FTNF002-00]
 gi|187931811|ref|YP_001891796.1| competence lipoprotein ComL [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|224457426|ref|ZP_03665899.1| competence lipoprotein ComL [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254367417|ref|ZP_04983443.1| conserved hypothetical lipoprotein [Francisella tularensis subsp.
           holarctica 257]
 gi|254369096|ref|ZP_04985108.1| hypothetical protein FTAG_00025 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|254370789|ref|ZP_04986794.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254373203|ref|ZP_04988692.1| conserved hypothetical protein [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|254374658|ref|ZP_04990139.1| conserved hypothetical protein [Francisella novicida GA99-3548]
 gi|254875127|ref|ZP_05247837.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|290954526|ref|ZP_06559147.1| competence lipoprotein ComL [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295312042|ref|ZP_06802857.1| competence lipoprotein ComL [Francisella tularensis subsp.
           holarctica URFT1]
 gi|56604798|emb|CAG45877.1| conserved hypothetical lipoprotein [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|89143920|emb|CAJ79139.1| conserved hypothetical lipoprotein [Francisella tularensis subsp.
           holarctica LVS]
 gi|110321110|emb|CAL09260.1| conserved hypothetical lipoprotein [Francisella tularensis subsp.
           tularensis FSC198]
 gi|118423754|gb|ABK90144.1| competence lipoprotein ComL [Francisella novicida U112]
 gi|134253233|gb|EBA52327.1| conserved hypothetical lipoprotein [Francisella tularensis subsp.
           holarctica 257]
 gi|151569032|gb|EDN34686.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis FSC033]
 gi|151570930|gb|EDN36584.1| conserved hypothetical protein [Francisella novicida GA99-3549]
 gi|151572377|gb|EDN38031.1| conserved hypothetical protein [Francisella novicida GA99-3548]
 gi|157122046|gb|EDO66186.1| hypothetical protein FTAG_00025 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|164551634|gb|ABU61215.2| lipoprotein with TPR domain [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|187712720|gb|ACD31017.1| competence lipoprotein ComL [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|254841126|gb|EET19562.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|282159537|gb|ADA78928.1| lipoprotein with TPR domain [Francisella tularensis subsp.
           tularensis NE061598]
 gi|332678563|gb|AEE87692.1| Putative component of the lipoprotein assembly complex (forms a
           complex with YaeT, YfgL, and NlpB) [Francisella cf.
           novicida Fx1]
          Length = 274

 Score =  208 bits (530), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 59/256 (23%), Positives = 110/256 (42%), Gaps = 12/256 (4%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +F   I  +  +  L        +D  L  V        +Y KA   ++ Q +  A  
Sbjct: 1   MKRFLYLIIITFMLLLLSSCG--PKKDSELPQVYTGYTASFIYAKAHEQMQNQKYFDAIR 58

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            +      +PF  +A K ++   +V Y   +   A +LG+++I  YP S    YVYY++G
Sbjct: 59  SYKSLVAQYPFTPLAEKGMVDLIYVYYMDDESTMALALGQQFIKMYPYSIYKGYVYYMIG 118

Query: 139 MSYAQMIRDVP----------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +   +  R +           +D    +       + ++   N  +V  A+  +    N 
Sbjct: 119 VVGFEDGRGMLQTYAPYDMNYHDPTGYQDAYTNFEKAIQLDPNGSFVPDAKRRMVFINNI 178

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           +A    +I  +Y KRG Y AAI R   V+ NY  +   E+A+   + AY  L L D+A+ 
Sbjct: 179 IARHYDDIAHFYFKRGAYNAAIDRASQVIRNYPQSTSTEDALVLTIRAYNKLGLYDQAKA 238

Query: 249 VVSLIQERYPQGYWAR 264
            + ++++ YP+  + +
Sbjct: 239 NIRVLKKNYPKNKFIK 254


>gi|33151687|ref|NP_873040.1| putative lipoprotein [Haemophilus ducreyi 35000HP]
 gi|18203223|sp|Q9L7A6|Y470_HAEDU RecName: Full=UPF0169 lipoprotein HD_0470; Flags: Precursor
 gi|6942293|gb|AAF32395.1|AF224466_2 hypothetical lipoprotein [Haemophilus ducreyi]
 gi|33147908|gb|AAP95429.1| conserved putative lipoprotein [Haemophilus ducreyi 35000HP]
          Length = 260

 Score =  208 bits (530), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 61/264 (23%), Positives = 115/264 (43%), Gaps = 21/264 (7%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K    +   +A   ++G   Q+  +       ++   + +Y +A   L++ +++ A  
Sbjct: 1   MRKLNSLVSLVLAGLLVIGCSNQNQTEQ------EILSAQALYTQAQTQLEKGDYASAIA 54

Query: 79  YFNQCSRDFPFAG-VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
            F +       A     +  L   F  Y  G+Y +A SL E ++  YP S N+DYV+YLV
Sbjct: 55  SFEKMGSRNVQANLFGEQIQLSLIFAHYKTGEYYKALSLAERFVRAYPNSNNMDYVHYLV 114

Query: 138 GMSYAQMIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           G+S  ++  +   D            + +        IV  Y  S YV  A+ ++    N
Sbjct: 115 GLSNVRLGDNFIQDFFHVNRSSRTIESIRNAYGNFQMIVRIYPQSQYVNDAQQWMVYLLN 174

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
           ++A  E+ I ++Y KR   VA + R + +L  Y  ++   +A+  + +AY  + L D   
Sbjct: 175 RMAEHELSIVKFYDKRDASVAVVNRVEEMLRFYPASKSTFDALPYMQKAYQRMGLKDSEA 234

Query: 248 EVVSLIQER----YPQGYWARYVE 267
           +V  LI+      +P+     Y +
Sbjct: 235 KVAELIEMNKAKVFPKITKPEYSK 258


>gi|261494333|ref|ZP_05990827.1| DNA uptake lipoprotein ComL [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|261309982|gb|EEY11191.1| DNA uptake lipoprotein ComL [Mannheimia haemolytica serotype A2
           str. OVINE]
          Length = 259

 Score =  208 bits (530), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 65/264 (24%), Positives = 120/264 (45%), Gaps = 22/264 (8%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + KF       +A  F+ G    S++++   +V D      +Y K   +L++ +++ A  
Sbjct: 1   MRKFKSLATLVLAGLFVAGCS-NSNKELEQSNVQD------LYGKGQTYLQDGDYNSAIR 53

Query: 79  YFNQCSRDF-PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           Y          ++G+  ++ L   + QY  G+Y +A    E +   YP + N+DYV+YL 
Sbjct: 54  YLEAVGTKGGQYSGLGEQTQLSLIYAQYKVGEYYKALDAAERFARSYPNAANMDYVFYLA 113

Query: 138 GMSYAQMIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           G+S A++  +   D              +        IV+RY  S Y + A+ ++    N
Sbjct: 114 GLSNARLSDNFIQDFFGVNRASRAVDNVRNAYGNFQTIVQRYPQSQYAQDAQNWMNYLFN 173

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
           +LA  E+ + ++Y +R  YVA + R + +L  Y +    ++A+  L EAY  + + D  +
Sbjct: 174 RLAEHELAVVKFYDERNAYVAVVNRIEEMLRFYPNTLATKQALPYLKEAYKQMNIPDAEQ 233

Query: 248 EVVSLIQER----YPQGYWARYVE 267
           +   LIQE      P     +Y E
Sbjct: 234 KTELLIQENESKELPNPEKPKYGE 257


>gi|115314565|ref|YP_763288.1| hypothetical protein FTH_0702 [Francisella tularensis subsp.
           holarctica OSU18]
 gi|115129464|gb|ABI82651.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica OSU18]
          Length = 274

 Score =  206 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 59/256 (23%), Positives = 110/256 (42%), Gaps = 12/256 (4%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +F   I  +  +  L        +D  L  V        +Y KA   ++ Q +  A  
Sbjct: 1   MKRFLYLIIITFMLLLLSSCG--PKKDSELPQVYTGYTASFIYAKAHEQMQNQKYFDAIR 58

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            +      +PF  +A K ++   +V Y   +   A +LG+++I  YP S    YVYY++G
Sbjct: 59  SYKSLVAQYPFTSLAEKGMVDLIYVYYMDDESTMALALGQQFIKMYPYSIYKGYVYYMIG 118

Query: 139 MSYAQMIRDVP----------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +   +  R +           +D    +       + ++   N  +V  A+  +    N 
Sbjct: 119 VVGFEDGRGMLQTYAPYDMNYHDPTGYQDAYTNFEKAIQLDPNGSFVPDAKRRMVFINNI 178

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           +A    +I  +Y KRG Y AAI R   V+ NY  +   E+A+   + AY  L L D+A+ 
Sbjct: 179 IARHYDDIAHFYFKRGAYNAAIDRASQVIRNYPQSTSTEDALVLTIRAYNKLGLYDQAKA 238

Query: 249 VVSLIQERYPQGYWAR 264
            + ++++ YP+  + +
Sbjct: 239 NIRVLKKNYPKNKFIK 254


>gi|167627647|ref|YP_001678147.1| competence lipoprotein ComL [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|241668215|ref|ZP_04755793.1| competence lipoprotein ComL [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876750|ref|ZP_05249460.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|167597648|gb|ABZ87646.1| competence lipoprotein ComL [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|254842771|gb|EET21185.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 274

 Score =  204 bits (521), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 54/254 (21%), Positives = 110/254 (43%), Gaps = 12/254 (4%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +F   I  +  +  L        +D  L  V        +Y KA   ++ + +  A  
Sbjct: 1   MKRFLYLIAAAFMLMLLASCG--PKKDSELPQVYTGFTASFIYAKAHEQMQNEKYFDAIR 58

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            +      +PF  +A K ++   +V Y   +   A +LG+++I  YP S    YVYY++G
Sbjct: 59  SYKSLVAQYPFTPLAEKGMVDLIYVYYMDDESTMALALGQQFIKMYPYSSYKGYVYYMIG 118

Query: 139 MSYAQMIRDVP----------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +   +  R +           +D    +       + ++      +V  A+  +    N 
Sbjct: 119 VVGFEDGRGILQTYAPYDMNYHDPTGYQDAYVNFEKAIKLDPKGSFVPDAKRRMIYINNI 178

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           +A    +I ++Y KRG Y AA+ R   ++ NY  +   ++A+   + AY  L L D+A++
Sbjct: 179 IAEHYYDIAKFYYKRGAYNAALDRASQIIRNYPQSTVTQDALVLTIRAYNKLGLYDQAKD 238

Query: 249 VVSLIQERYPQGYW 262
            + ++++ YP+  +
Sbjct: 239 NIRVLKKNYPKNKF 252



 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 33/74 (44%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
               Y+ A  + K   ++ A +  +Q  R++P + V + +L+++       G Y QA   
Sbjct: 180 AEHYYDIAKFYYKRGAYNAALDRASQIIRNYPQSTVTQDALVLTIRAYNKLGLYDQAKDN 239

Query: 117 GEEYITQYPESKNV 130
                  YP++K V
Sbjct: 240 IRVLKKNYPKNKFV 253



 Score = 35.9 bits (82), Expect = 5.6,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 29/70 (41%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           ++  +Y  AI  ++ ++A Y     AE+ M  L+  Y        A  +     + YP  
Sbjct: 48  MQNEKYFDAIRSYKSLVAQYPFTPLAEKGMVDLIYVYYMDDESTMALALGQQFIKMYPYS 107

Query: 261 YWARYVETLV 270
            +  YV  ++
Sbjct: 108 SYKGYVYYMI 117


>gi|330813742|ref|YP_004357981.1| putative competence lipoprotein ComL [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327486837|gb|AEA81242.1| putative competence lipoprotein ComL [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 279

 Score =  204 bits (521), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 67/246 (27%), Positives = 127/246 (51%), Gaps = 3/246 (1%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
               ++ F  G   + ++ ++++  T +  +R +Y +A+L  K   +  A E F +  ++
Sbjct: 10  LLIFSLIFAYGCSSK-NKTIFVEPKTTIPLER-LYTEALLNYKNNKYQDAVELFEEVEKN 67

Query: 87  FPF-AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
           + F    A KSLLM  ++ Y   +Y ++  + +++  +Y  +KN+DYV YL+ M   + I
Sbjct: 68  YSFNTEWASKSLLMRGYIYYEVSRYVESLEILKKFKMRYAGNKNMDYVEYLIAMCLFEQI 127

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
             +   Q  T L  +   +I+  Y NS Y + ++F + + ++QLA KE+ I RYY +R +
Sbjct: 128 NIIALSQENTLLTERQFKKIILNYPNSRYAEDSKFKLDLIQDQLAGKEMYIARYYTEREK 187

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
           +  A+ R   VL  +    + EEA+ RLVE +  L  +  AR+  S++   Y    W + 
Sbjct: 188 WGPALVRLNKVLKYHETTVYIEEALHRLVEIHYKLGNIPAARKYASILGYNYNDSDWYKK 247

Query: 266 VETLVK 271
              +V+
Sbjct: 248 SYNIVE 253


>gi|148244619|ref|YP_001219313.1| competence lipoprotein ComL [Candidatus Vesicomyosocius okutanii
           HA]
 gi|146326446|dbj|BAF61589.1| competence lipoprotein ComL [Candidatus Vesicomyosocius okutanii
           HA]
          Length = 255

 Score =  204 bits (521), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 57/255 (22%), Positives = 102/255 (40%), Gaps = 14/255 (5%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L I     V  L G   Q  +++ ++S+T     +  + +A         +KA + F Q 
Sbjct: 4   LFIILPFLVLLLNGCSWQ--KEIKIESITKGWSPKTFFTQAKEQESLGLTNKAIKLFEQL 61

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +P +  A +S L  A+  Y    Y QA      YI  YPE  +  Y YYL G+    
Sbjct: 62  QATYPGSKYALQSKLEIAYALYKNKDYDQAIYHLNNYIKFYPEHFSTPYAYYLRGVISQD 121

Query: 144 MIRDV---------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
             R                + +    Y   +++++  + Y +     +   RN L+  E+
Sbjct: 122 KSRSFLDDYFTDSAQRSVNSVRNAFNYYLALIDKFPKTKYTEDTITRLVALRNILSRHEL 181

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
            I  YY K+G  +AAI R + ++  Y +      A+  +   Y A+     A++   +++
Sbjct: 182 FIAIYYTKKGANIAAINRTKFIVEKYQNTPSVPAALHLMATNYDAINAGTLAKDTRRVLE 241

Query: 255 ERYPQGYWARYVETL 269
           + YP   W     +L
Sbjct: 242 KNYP---WYTPYYSL 253


>gi|261493666|ref|ZP_05990185.1| DNA uptake lipoprotein ComL [Mannheimia haemolytica serotype A2
           str. BOVINE]
 gi|261310666|gb|EEY11850.1| DNA uptake lipoprotein ComL [Mannheimia haemolytica serotype A2
           str. BOVINE]
          Length = 259

 Score =  204 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 65/264 (24%), Positives = 120/264 (45%), Gaps = 22/264 (8%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + KF       +A  F+ G    S++++   +V D      +Y K   +L++ +++ A  
Sbjct: 1   MRKFKSLATLVLAGLFVAGCS-NSNKELEQSNVQD------LYGKGQTYLQDGDYNSAIR 53

Query: 79  YFNQCSRDF-PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           Y          ++G+  ++ L   + QY  G+Y +A    E +   YP + N+DYV+YL 
Sbjct: 54  YLEAVGTKGGQYSGLGEQTQLSLIYAQYKVGEYYKALDAAERFARSYPNAANMDYVFYLA 113

Query: 138 GMSYAQMIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           G+S A++  +   D              +        IV+RY  S Y + A+ ++    N
Sbjct: 114 GLSNARLSDNFIQDFFGVNRASRAVDNVRNAYGNFQTIVQRYPQSQYAQDAQNWMNYLFN 173

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
           +LA  E+ + ++Y +R  YVA + R + +L  Y +    ++A+  L EAY  + + D  +
Sbjct: 174 RLAEHELAVVKFYDERNAYVAVVNRIEEMLRFYPNTLATKQALPYLKEAYKQMNIPDAEQ 233

Query: 248 EVVSLIQE----RYPQGYWARYVE 267
           +   LIQE      P     +Y E
Sbjct: 234 KTELLIQEYESKELPNPEKPKYGE 257


>gi|269958518|ref|YP_003328305.1| putative DNA uptake lipoprotein ComL [Anaplasma centrale str.
           Israel]
 gi|269848347|gb|ACZ48991.1| putative DNA uptake lipoprotein ComL [Anaplasma centrale str.
           Israel]
          Length = 290

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 71/213 (33%), Positives = 106/213 (49%), Gaps = 3/213 (1%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            ++YE  +         KA   F++    +PF+ +A    L++A   Y  G Y +AASL 
Sbjct: 34  HKLYEDGLRLFHSGQHKKAVAIFDKIEALYPFSQMAIDGSLVAAVSHYELGNYAEAASLA 93

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           E YI  YP SKN+DY YY+   +    + D+  DQ     +    S  V  + NS Y+  
Sbjct: 94  ESYIDAYPSSKNIDYAYYVRVTAKYMQVPDLGLDQGVALEVRNLASEFVRMFPNSRYLAE 153

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
               +   +  LAA+E  IG +YL+RG ++AAI RF  +++ Y D+ +A E + RLVEAY
Sbjct: 154 VSQRLAAVQQHLAAREFMIGDFYLRRGGFIAAIKRFNSLVSGYPDSVYAHEGLYRLVEAY 213

Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLV 270
            AL     A   +S + E  P   W    E L+
Sbjct: 214 TALGDRQSAAMYLSRLGENSP---WRVKAERLL 243


>gi|158522066|ref|YP_001529936.1| DNA uptake lipoprotein-like protein [Desulfococcus oleovorans Hxd3]
 gi|158510892|gb|ABW67859.1| DNA uptake lipoprotein-like protein [Desulfococcus oleovorans Hxd3]
          Length = 255

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 44/211 (20%), Positives = 92/211 (43%), Gaps = 9/211 (4%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + + A+ +   + +C + G   +             +  +E+ ++   +  +  + K+ E
Sbjct: 32  MKQLAVILSALLMICAMAGCAHK---------PVQEKSAQELADEGTRYFDKGRYKKSIE 82

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            F      +PF+ +   + L  A   ++  +Y+ A S  E +   +P  ++V +V +  G
Sbjct: 83  AFENLRDWYPFSKLTTLADLKVADAYFNMEEYESAVSAYENFERLHPRHESVPFVIFRTG 142

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           + +   +  +  DQ      +   SR+V  Y +S Y   A  Y+   R  LAA E+ + +
Sbjct: 143 LCHFNRLDTIDRDQTPAHRAIDAFSRLVRAYPDSEYASQATDYIHQCRESLAAHELYVAK 202

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
           +Y K   Y +A+ RF+ ++  Y D    E A
Sbjct: 203 FYFKTKRYRSALYRFKQIIEKYPDVGDIETA 233


>gi|189183077|ref|YP_001936862.1| ComL-like lipoprotein [Orientia tsutsugamushi str. Ikeda]
 gi|189179848|dbj|BAG39628.1| ComL-like lipoprotein [Orientia tsutsugamushi str. Ikeda]
          Length = 264

 Score =  203 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 51/256 (19%), Positives = 122/256 (47%), Gaps = 8/256 (3%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
              +++F  T+F  +     + + ++ +    L        + + Y +A L  +++ ++ 
Sbjct: 11  LLNMFRFICTLFVLLCFTNCIVFAKEKTTITCL-------SEDDAYSRAELLFQKKKYNA 63

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A + F         +  A K+ LM  +  Y AG+Y +A+ + + +I  +P  + +  VYY
Sbjct: 64  AAKQFFDIFVQHLGSNTATKAELMRGYSLYLAGQYSEASEVLDNFIRLHPVHQKIADVYY 123

Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           L  ++  +   +   D          + ++++++  S +   A+  + V    LA  +++
Sbjct: 124 LKALAEYKQAHN-QQDLEQLLHARLELQQVIDKFPKSDFAIKAKEKINVISKNLAGSQID 182

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           IG++YL +   +AA+ RF  V+  YS   +  EA+ R+ ++Y  L    E +E ++++  
Sbjct: 183 IGKFYLNKKNPIAALNRFNTVVDKYSHTSYYPEAIYRIAQSYALLGRKQEMKEQLAILNS 242

Query: 256 RYPQGYWARYVETLVK 271
           ++P   W++   +L++
Sbjct: 243 KFPNSTWSKRASSLLQ 258


>gi|254361950|ref|ZP_04978081.1| DNA uptake lipoprotein ComL [Mannheimia haemolytica PHL213]
 gi|153093497|gb|EDN74477.1| DNA uptake lipoprotein ComL [Mannheimia haemolytica PHL213]
          Length = 259

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 59/248 (23%), Positives = 112/248 (45%), Gaps = 18/248 (7%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + KF       +A  F+ G    +          +    +++Y K   +L++ +++ A  
Sbjct: 1   MRKFKSLATLVLAGLFVAGCSNSNKE-------LEQSNVQDLYGKGQTYLQDGDYNSAIR 53

Query: 79  YFNQCSRDF-PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           Y          ++G+  ++ L   + QY  G+Y +A    E +   YP + N+DYV+YL 
Sbjct: 54  YLEAVGTKGGQYSGLGEQTQLSLIYAQYKVGEYYKALDAAERFARSYPNAANMDYVFYLA 113

Query: 138 GMSYAQMIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           G+S A++  +   D              +        IV+RY  S Y + A+ ++    N
Sbjct: 114 GLSNARLSDNFIQDFFGVNRASRAVDNVRNAYGNFQTIVQRYPQSQYAQDAQNWMNYLFN 173

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
           +LA  E+ + ++Y +R  YVA + R + +L  Y +    ++A+  L EAY  + + D  +
Sbjct: 174 RLAEHELAVVKFYDERNAYVAVVNRIEEMLRFYPNTLATKQALPYLKEAYKQMNIPDAEQ 233

Query: 248 EVVSLIQE 255
           +   LIQE
Sbjct: 234 KTELLIQE 241


>gi|222475440|ref|YP_002563857.1| hypothetical protein AMF_769 [Anaplasma marginale str. Florida]
 gi|255003426|ref|ZP_05278390.1| hypothetical protein AmarPR_04180 [Anaplasma marginale str. Puerto
           Rico]
 gi|255004546|ref|ZP_05279347.1| hypothetical protein AmarV_04500 [Anaplasma marginale str.
           Virginia]
 gi|222419578|gb|ACM49601.1| Conserved hypothetical protein [Anaplasma marginale str. Florida]
          Length = 309

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 66/213 (30%), Positives = 107/213 (50%), Gaps = 3/213 (1%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            ++YE  +    E  + KA   F++    +PF+ +A    L++A   Y  G Y ++ASL 
Sbjct: 53  HKLYEDGLRLFHEGRYKKAIAVFDKIEALYPFSQMAIDGSLVAAVAHYELGNYAESASLA 112

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           E YI  YP SK++DY YY+  ++    I D+  DQ     +       V  + NS ++  
Sbjct: 113 EGYIDSYPSSKSIDYAYYVRILAKYMQIPDLGLDQGVALEVRNLAYEFVRMFPNSRHLGE 172

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
               +   +  LAA+E  IG++YLKRG ++AA+ RF+ +++ Y  + +  E + RLVEAY
Sbjct: 173 ISKRLAAVQQHLAAREFMIGKFYLKRGGHIAAVKRFRALISAYPSSAYTNEGLYRLVEAY 232

Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLV 270
            AL     A   +S + E      W    E L+
Sbjct: 233 TALGDHKSAAAYLSKLDE---GNVWRARAERLL 262


>gi|194323821|ref|ZP_03057597.1| tetratricopeptide repeat domain protein [Francisella tularensis
           subsp. novicida FTE]
 gi|208779912|ref|ZP_03247256.1| tetratricopeptide repeat domain protein [Francisella novicida FTG]
 gi|194322185|gb|EDX19667.1| tetratricopeptide repeat domain protein [Francisella tularensis
           subsp. novicida FTE]
 gi|208744367|gb|EDZ90667.1| tetratricopeptide repeat domain protein [Francisella novicida FTG]
          Length = 262

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 57/241 (23%), Positives = 105/241 (43%), Gaps = 10/241 (4%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
            L+       +D  L  V        +Y KA   ++ Q +  A   +      +PF  +A
Sbjct: 2   LLLLSSCGPKKDSELPQVYTGYTASFIYAKAHEQMQNQKYFDAIRSYKSLVAQYPFTPLA 61

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP---- 149
            K ++   +V Y   +   A +LG+++I  YP S    YVYY++G+   +  R +     
Sbjct: 62  EKGMVDLIYVYYMDDESTMALALGQQFIKMYPYSIYKGYVYYMIGVVGFEDGRGMLQTYA 121

Query: 150 ------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
                 +D    +       + ++   N  +V  A+  +    N +A    +I  +Y KR
Sbjct: 122 PYDMNYHDPTGYQDAYTNFEKAIQLDPNGSFVPDAKRRMVFINNIIARHYDDIAHFYFKR 181

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
           G Y AAI R   V+ NY  +   E+A+   + AY  L L D+A+  + ++++ YP+  + 
Sbjct: 182 GAYNAAIDRASQVIRNYPQSTSTEDALVLTIRAYNKLGLYDQAKANIRVLKKNYPKNKFI 241

Query: 264 R 264
           +
Sbjct: 242 K 242


>gi|254995247|ref|ZP_05277437.1| hypothetical protein AmarM_04700 [Anaplasma marginale str.
           Mississippi]
          Length = 289

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 66/213 (30%), Positives = 107/213 (50%), Gaps = 3/213 (1%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            ++YE  +    E  + KA   F++    +PF+ +A    L++A   Y  G Y ++ASL 
Sbjct: 53  HKLYEDGLRLFHEGRYKKAIAVFDKIEALYPFSQMAIDGSLVAAVAHYELGNYAESASLA 112

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           E YI  YP SK++DY YY+  ++    I D+  DQ     +       V  + NS ++  
Sbjct: 113 EGYIDSYPSSKSIDYAYYVRILAKYMQIPDLGLDQGVALEVRNLAYEFVRMFPNSRHLGE 172

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
               +   +  LAA+E  IG++YLKRG ++AA+ RF+ +++ Y  + +  E + RLVEAY
Sbjct: 173 ISKRLAAVQQHLAAREFMIGKFYLKRGGHIAAVKRFRALISAYPSSAYTNEGLYRLVEAY 232

Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLV 270
            AL     A   +S + E      W    E L+
Sbjct: 233 TALGDHKSAAAYLSKLDE---GNVWRARAERLL 262


>gi|254451800|ref|ZP_05065237.1| DNA uptake lipoprotein [Octadecabacter antarcticus 238]
 gi|198266206|gb|EDY90476.1| DNA uptake lipoprotein [Octadecabacter antarcticus 238]
          Length = 207

 Score =  201 bits (512), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 59/170 (34%), Positives = 93/170 (54%)

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           AF  +    Y  + +  + YI  YP   +  Y  YL+ +SY   I ++  DQ  T   LQ
Sbjct: 10  AFSYHRDQDYPNSRAAAQHYIDFYPVDDDAAYAQYLLALSYYDQIDEIGRDQGLTFQALQ 69

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
            +  ++ERY +S Y + +     +  + LAAKE+EIGRYYLKR  + AA+ RF++V+ ++
Sbjct: 70  ALRVVIERYPDSEYARSSVLKFDLAFDHLAAKEMEIGRYYLKRDNFAAAVNRFRIVVEDF 129

Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
               H  EA+ RLVE+Y++L L+DEAR   +++   Y    W      L+
Sbjct: 130 QTTSHTPEALHRLVESYLSLGLLDEARSAGAVLGYNYRSTEWYADSFALL 179


>gi|56417074|ref|YP_154148.1| hypothetical protein AM1010 [Anaplasma marginale str. St. Maries]
 gi|56388306|gb|AAV86893.1| hypothetical protein AM1010 [Anaplasma marginale str. St. Maries]
          Length = 308

 Score =  201 bits (512), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 66/213 (30%), Positives = 107/213 (50%), Gaps = 3/213 (1%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            ++YE  +    E  + KA   F++    +PF+ +A    L++A   Y  G Y ++ASL 
Sbjct: 53  HKLYEDGLRLFHEGRYKKAIAVFDKIEALYPFSQMAIDGSLVAAVAHYELGNYAESASLA 112

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           E YI  YP SK++DY YY+  ++    I D+  DQ     +       V  + NS ++  
Sbjct: 113 EGYIDSYPSSKSIDYAYYVRILAKYMQIPDLGLDQGVALEVRNLAYEFVRMFPNSRHLGE 172

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
               +   +  LAA+E  IG++YLKRG ++AA+ RF+ +++ Y  + +  E + RLVEAY
Sbjct: 173 ISKRLAAVQQHLAAREFMIGKFYLKRGGHIAAVKRFRALISAYPSSAYTNEGLYRLVEAY 232

Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLV 270
            AL     A   +S + E      W    E L+
Sbjct: 233 TALGDHKSAAAYLSKLDE---GNVWRARAERLL 262


>gi|148285105|ref|YP_001249195.1| TPR repeat-containing protein [Orientia tsutsugamushi str. Boryong]
 gi|146740544|emb|CAM81139.1| tetratricopeptide repeat protein with 1 trp repeats [Orientia
           tsutsugamushi str. Boryong]
          Length = 264

 Score =  201 bits (512), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 53/256 (20%), Positives = 125/256 (48%), Gaps = 8/256 (3%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
              +++F  T+F  +     + + ++ +   YL        + + Y +A L  +++ ++ 
Sbjct: 11  LLNMFRFICTLFVLLCFTNCIIFAKEKTIITYL-------SEDDAYSRAELLFQKKKYNA 63

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A + F         +  A K+ LM  +  Y AG+Y +A+ + + +I  +P  + +  VYY
Sbjct: 64  AAKQFFDIFVQHLGSNTATKAELMQGYSLYLAGQYSEASEVLDNFIRLHPVHQKIADVYY 123

Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           L  ++  +   +   D          + ++++++  S +   A+  + V    LA+ +++
Sbjct: 124 LKALAEYKQAHN-QQDLEQLLHAKLALQQVIDKFPKSDFAVKAKEKINVISKNLASSQID 182

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           IG++YL +   +AA+ RF  V+  YS   +  EA+ R+ ++Y  L    E +E ++++  
Sbjct: 183 IGKFYLNKKNPIAALNRFNTVVDKYSHTSYYPEAIYRIAQSYALLGRKQEMKEQLAILNI 242

Query: 256 RYPQGYWARYVETLVK 271
           ++P G W++   +L++
Sbjct: 243 KFPNGTWSKRASSLLQ 258


>gi|206890303|ref|YP_002248672.1| tetratricopeptide repeat domain protein [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206742241|gb|ACI21298.1| tetratricopeptide repeat domain protein [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 248

 Score =  200 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 57/246 (23%), Positives = 111/246 (45%), Gaps = 7/246 (2%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
           F   I  +I    L    +++ +    D V  ++   E+       + ++ + +A +   
Sbjct: 5   FKFLIITAIVSLLLSCGGKEAVKKEEFDPVVYLKKADEL-------VSKKEYEEARKLLL 57

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
           +          A  + L  A       + + A +    +I  YPES    Y  Y +GM+Y
Sbjct: 58  EIKNRESAKEYAPLAQLKIADSYLKEDEPELAITEYRRFIELYPESTYAPYAQYSIGMAY 117

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            + I          +  L    ++ + Y   PY       +   RN +A  E+ IG++Y 
Sbjct: 118 FRQIEGPERGAGTAQKALNEFLKLEKMYPRHPYGDILPLRIQKCRNIIAEGELIIGKFYH 177

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           K+G Y AAI RF+ ++ NY D ++ +E +  LV++Y  L ++D+A++ + L++E++P   
Sbjct: 178 KKGSYTAAIGRFEGIVKNYPDFKNLDETLYLLVDSYKNLNMLDKAKQYLKLLKEKFPDSQ 237

Query: 262 WARYVE 267
           +A+  E
Sbjct: 238 FAKKAE 243


>gi|258592923|emb|CBE69232.1| putative Tetratricopeptide TPR_2 precursor [NC10 bacterium 'Dutch
           sediment']
          Length = 304

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 48/251 (19%), Positives = 110/251 (43%), Gaps = 4/251 (1%)

Query: 13  EAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN 72
             +  +L   A       +V    G +  S +   + + +D    +E+  +A      + 
Sbjct: 2   RFFMPRLLLVAGCATILFSVSGCAGLDLFSPKQAEVPAGSD----QELMSRAEAAFALKQ 57

Query: 73  FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
           + +  ++  +   +FP + +   + L S    +   ++ ++ +  + ++  +P+ + +D 
Sbjct: 58  YDEGRKHLQRLINNFPESELVPTARLNSGRTYFDEKRFDESRAEYQRFMELFPQHEQLDE 117

Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
             Y +G+SY + +  V  DQ  T    +    ++  + NS +V  A+  +     QL  +
Sbjct: 118 AQYYIGLSYFRQMEKVDRDQTMTNNAAREFRTLINDFRNSQFVSDAQAKLAECYRQLVQR 177

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           E+ +G++Y  R  Y AAIPRF+ +L  Y  +++ ++A+  L E+   L     A+     
Sbjct: 178 ELYVGKFYFHREAYGAAIPRFESILKEYPGSQYDDQALYYLGESLWELEQKVPAKAAFQR 237

Query: 253 IQERYPQGYWA 263
           +   +P    A
Sbjct: 238 LIAEFPDSDMA 248



 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 36/123 (29%), Gaps = 22/123 (17%)

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ--------------YSAGKYQQAASLGEE 119
           + A   F     DF  +     +    A                 +    Y  A    E 
Sbjct: 141 NNAAREFRTLINDFRNSQFVSDAQAKLAECYRQLVQRELYVGKFYFHREAYGAAIPRFES 200

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            + +YP S+  D   Y +G S  ++ + VP              R++  + +S     A 
Sbjct: 201 ILKEYPGSQYDDQALYYLGESLWELEQKVP--------AKAAFQRLIAEFPDSDMAPPAA 252

Query: 180 FYV 182
             +
Sbjct: 253 KRI 255



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 38/108 (35%), Gaps = 1/108 (0%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           QRE+Y     +   + +  A   F    +++P +    ++L       +   +   A + 
Sbjct: 176 QRELYV-GKFYFHREAYGAAIPRFESILKEYPGSQYDDQALYYLGESLWELEQKVPAKAA 234

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
            +  I ++P+S         +GM+  Q  R            L  MS 
Sbjct: 235 FQRLIAEFPDSDMAPPAAKRIGMTLVQGPRSRKPPAGLVGGALDSMSD 282


>gi|118602522|ref|YP_903737.1| putative transmembrane protein [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|118567461|gb|ABL02266.1| putative transmembrane protein [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 253

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 57/244 (23%), Positives = 100/244 (40%), Gaps = 11/244 (4%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L I        L G   Q   +   +S+T     ++ + +A       +  KA E F Q 
Sbjct: 4   LFIILPFLTLLLNGCFWQ--EEAKRESITKGWLPKKFFAQAKEEASSGSTDKAIEIFEQL 61

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +P +  A +S L  A+  Y +  Y QA      YI  YPE  +  Y YYL G     
Sbjct: 62  QAAYPGSKYALQSKLEIAYALYKSKDYNQAIDRLNSYIKLYPEHFSTPYAYYLRGAVSQD 121

Query: 144 MIRDV---------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
             R             D  + +    Y   ++ ++  + Y + A+ ++ + RN L+  E+
Sbjct: 122 KSRSFLDDYLTDSAQRDVNSVRDAFNYYLALIYKFPKTEYAEEAKIHLVILRNILSRHEL 181

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
            +  YY KRG  +AAI R + ++  Y +      A+  +   Y A++    A++   +++
Sbjct: 182 FVAIYYTKRGANIAAINRTKFIIEKYPNTPSVPAALHLMAYNYDAISANILAKDARRVLK 241

Query: 255 ERYP 258
             YP
Sbjct: 242 NSYP 245


>gi|301064420|ref|ZP_07204845.1| outer membrane assembly lipoprotein YfiO [delta proteobacterium
           NaphS2]
 gi|300441502|gb|EFK05842.1| outer membrane assembly lipoprotein YfiO [delta proteobacterium
           NaphS2]
          Length = 240

 Score =  198 bits (505), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 55/222 (24%), Positives = 99/222 (44%), Gaps = 1/222 (0%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
             +AVC+L      S  + +     D     E+  + +    +  F+KA E F +    +
Sbjct: 11  LMLAVCWLFLLSGCSVWNEFF-GPEDEITPAEIMNEGMADFNDGKFTKAIETFQKIKDRY 69

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
           P++  A  + L  A   Y  G+Y +A     E+   +P +KNV YV Y  GM Y      
Sbjct: 70  PYSTFALTAELKMADALYEKGEYDEARDEYAEFEKMHPRNKNVPYVLYRQGMCYFNKSAA 129

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
           +  DQ  T    +   R+++R+  S Y + AR  V     +LA  E+ +G +Y  +G+Y 
Sbjct: 130 IDRDQSDTFKAREEFERLIKRFRKSDYTEQARRKVRECYIKLAEHELYVGNFYFTKGKYE 189

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
            A+ R+  ++ +Y D     +A+  + +    +  ++ A E 
Sbjct: 190 TAMARYLYLIDHYPDVGQYYQALESIKKCKDRIKELNGAEET 231


>gi|303326797|ref|ZP_07357239.1| putative competence protein [Desulfovibrio sp. 3_1_syn3]
 gi|302862785|gb|EFL85717.1| putative competence protein [Desulfovibrio sp. 3_1_syn3]
          Length = 243

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 53/253 (20%), Positives = 104/253 (41%), Gaps = 12/253 (4%)

Query: 19  LYKFALTIF-FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           ++K  L  F  ++++  + G          +         +E++E A   + E+N+ +A 
Sbjct: 1   MHKKLLRCFVLAVSLFAVSGCGIID----MIYLPPAEDTAQEIFEAANDAMSEKNYVRAV 56

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           E +N+    +PF+     + L      +   +Y+ AA   +++ + +P  + + YV Y  
Sbjct: 57  ELYNKLRDTYPFSPYTIDAELSLGDAYFLDEEYELAAETYKDFESLHPRHEAIPYVLYQT 116

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
           GMS  +  R +       +    Y +R+ + Y +SPY KGA  ++   R  +A  E+ I 
Sbjct: 117 GMSLMKQFRSIDRATTELQEAYDYFNRLSQMYPDSPYAKGAEEHMHTCRKLMAEHELYIA 176

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEE-AMARLVEAYVALALMDEAREVVSLIQER 256
             +    +Y  A  R++ ++ N+ D     E A  + + AY        A          
Sbjct: 177 DVFWHMKKYGPAWRRYEFIMENFKDVPEVAEHAKEKSLAAYHNYREEQAAETREKR---- 232

Query: 257 YPQGYWARYVETL 269
             QG W  +   L
Sbjct: 233 --QGSWREWFTWL 243


>gi|332704216|ref|ZP_08424304.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio africanus
           str. Walvis Bay]
 gi|332554365|gb|EGJ51409.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio africanus
           str. Walvis Bay]
          Length = 243

 Score =  196 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 42/196 (21%), Positives = 92/196 (46%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
           FF   VC L+          Y    T      E+++     + +++++ A EYF +    
Sbjct: 6   FFIFTVCALIAASSGCGVIDYFFIPTPEETALELFQAGQEEMAQEDWADAVEYFTKLRDR 65

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
           FPF+    ++ L+ A   ++ GKY +A    +E+ + +P    + YV + +GM+  + + 
Sbjct: 66  FPFSPYTVQAELLLANSHFNDGKYAEALQAYKEFESLHPSDPRIPYVLFQIGMANYKSMG 125

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
            +   Q      +++  R+++ Y +S +   A+ ++ + R +LA  E+ +  +Y +   +
Sbjct: 126 SIDKPQHQAAEAVEFFRRLIQSYPDSEFAPKAKDHLLLARRRLAEHELFVADFYWRAERF 185

Query: 207 VAAIPRFQLVLANYSD 222
            +A  R+  V+  Y D
Sbjct: 186 GSAWERYSFVVEQYKD 201


>gi|297170256|gb|ADI21293.1| DNA uptake lipoprotein [uncultured gamma proteobacterium
           HF0010_09F21]
          Length = 240

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 56/229 (24%), Positives = 98/229 (42%), Gaps = 16/229 (6%)

Query: 38  WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
                 ++           +  +Y  A   +  +N++ A E   +  R +PF   A ++ 
Sbjct: 18  CSSNDKKE------EADTPEVNLYNLAQSRISSRNYTGAAEALFRIERSYPFGVYAEQAR 71

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP-------- 149
               +V Y  G +  + +  E++I  YP + N+DY Y++ GM+       +         
Sbjct: 72  ADLIYVHYMTGNFDASYAAAEKFIRLYPRNTNIDYAYFMKGMTGYYADDGLFSDFLTLNL 131

Query: 150 --YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
              D    K     ++  + RY  S YV  AR  +   RN +A+ E++   YYLKRG YV
Sbjct: 132 AKRDVTGAKKSFADLTEFLIRYPESDYVDEARSRLVFLRNLIASNELDSAEYYLKRGAYV 191

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           AA+ R   ++ N  +    + A+  + EAY  L   D A +V +L +  
Sbjct: 192 AALNRATYIIKNMPNTSEKKRALKIMKEAYTKLGYKDYADKVKALEEVN 240


>gi|51244660|ref|YP_064544.1| hypothetical protein DP0808 [Desulfotalea psychrophila LSv54]
 gi|50875697|emb|CAG35537.1| hypothetical protein DP0808 [Desulfotalea psychrophila LSv54]
          Length = 265

 Score =  196 bits (498), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 51/218 (23%), Positives = 95/218 (43%), Gaps = 4/218 (1%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSR-DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           L+ FA+ I   IA+  L G     S  D+  +         ++  K +       +  A 
Sbjct: 11  LHSFAIII---IAMSLLGGCADMKSMFDITYEKPDLEFPANDLIIKGMEDYNVGKYFGAI 67

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
            YF +    +PF+  A  + L +A   Y   KY +A +  +++  ++P ++ + YV Y  
Sbjct: 68  SYFQEILEKYPFSPEAPLAELKAADCNYYMDKYPEALAQYQDFEDRHPTNEAIPYVMYQK 127

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
           GMS  + I  +  D    +  + + S+++  + NSPY   AR  +    + LA  E  + 
Sbjct: 128 GMSNYKQIDRIDRDPIVARRAVDFFSQLLRAFPNSPYTTNARKNIAEAISFLADHEFAVI 187

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
            +YL+  +Y  A  R + ++  Y +     +A   L E
Sbjct: 188 EFYLRTEKYEQAETRLEYLITAYPNTNVIPKAEKILAE 225



 Score = 39.7 bits (92), Expect = 0.38,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 57/182 (31%), Gaps = 32/182 (17%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y+ GKY  A S  +E + +YP S                M +            L     
Sbjct: 58  YNVGKYFGAISYFQEILEKYPFSPEAPLAELKAADCNYYMDKYP--------EALAQYQD 109

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA--AIPRFQLVLANYSD 222
             +R+  +     A  YV   +     K+++       R   VA  A+  F  +L  + +
Sbjct: 110 FEDRHPTNE----AIPYVMYQKGMSNYKQIDRID----RDPIVARRAVDFFSQLLRAFPN 161

Query: 223 AEHAEEAMARLVEA--------------YVALALMDEAREVVSLIQERYPQGYWARYVET 268
           + +   A   + EA              Y+     ++A   +  +   YP        E 
Sbjct: 162 SPYTTNARKNIAEAISFLADHEFAVIEFYLRTEKYEQAETRLEYLITAYPNTNVIPKAEK 221

Query: 269 LV 270
           ++
Sbjct: 222 IL 223


>gi|220904471|ref|YP_002479783.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
 gi|219868770|gb|ACL49105.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
          Length = 243

 Score =  196 bits (498), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 52/251 (20%), Positives = 105/251 (41%), Gaps = 11/251 (4%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
            K   +I   +++    G          +         +E++E A   + E+N+ +A E 
Sbjct: 3   KKLLRSILLVMSMLMASGCGIID----MIYLPPAEDTAQEIFEAANDAMSEKNYVRAVEL 58

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
           +N+    +PF+     + L      +   +Y+ A+   +++ + +P  + + YV Y  GM
Sbjct: 59  YNKLRDTYPFSPYTIDAELSLGDAYFLDEEYELASESYKDFESLHPRHEAIPYVLYQTGM 118

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           S  +  R +       +    Y +R+ + Y +SPY KGA  ++   R  +A  E+ I   
Sbjct: 119 SLLKQFRSIDRATTELQEAYDYFNRLHQMYPDSPYAKGAEEHMITCRKLMAEHELYIADV 178

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEE-AMARLVEAYVALALMDEAREVVSLIQERYP 258
           +    +Y  A  R++ ++ N+ D     E A  + + AY      ++A+E          
Sbjct: 179 FWHMKKYGPAWHRYEFIVKNFQDVPEVAEHAKEKSLAAYHYYK-EEQAKETRQK-----R 232

Query: 259 QGYWARYVETL 269
           QG W  + + L
Sbjct: 233 QGSWREWFKWL 243


>gi|297180550|gb|ADI16762.1| DNA uptake lipoprotein [uncultured gamma proteobacterium
           HF0010_11B23]
          Length = 224

 Score =  195 bits (496), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 56/231 (24%), Positives = 100/231 (43%), Gaps = 17/231 (7%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
           +G       D     V       ++Y  A   +  QN+  A +   +  R +PF   A +
Sbjct: 1   MGCASNEKEDAEPPEV-------QLYRLAQDRISAQNYLGAVDSLVRIERFYPFGVYAEQ 53

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV------- 148
           +     +  Y +G Y QA +  E++I  YP + NVDY Y++ GM+       +       
Sbjct: 54  ARADLIYAHYMSGDYDQAYAASEKFIRLYPRNTNVDYAYFMKGMTGYYADEGLLGNLFSL 113

Query: 149 ---PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
                D          ++  + RY  S Y+  AR  +   RN +A+ E++   YY+KRG 
Sbjct: 114 SLAKRDIGGAMQSYADLTEFLIRYPESEYIDAARERLIFLRNLIASSELDGAEYYMKRGA 173

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           Y+AA+ R   VL N  ++   + A+  + ++++ L   + A +V S+    
Sbjct: 174 YLAALNRANYVLKNIPNSTETQRALDIMKKSFIELGYEEYAEKVSSVEALN 224


>gi|297180915|gb|ADI17119.1| DNA uptake lipoprotein [uncultured gamma proteobacterium
           HF0070_03O15]
 gi|297181509|gb|ADI17696.1| DNA uptake lipoprotein [uncultured gamma proteobacterium
           HF0130_23I23]
          Length = 238

 Score =  195 bits (496), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 10/202 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y+++   +  +NF  A E  ++  R +PF   A ++     +  Y +G Y  A +  E+
Sbjct: 33  LYKQSQDRINAKNFIGAVESLSRIERFYPFGVYAEQARADLIYAFYMSGDYDNAYASSEK 92

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERY 169
           +I  YP + N+DY Y++ GM+       +            D          ++  + RY
Sbjct: 93  FIRLYPRNTNIDYAYFMRGMTGYYEDDGLLSSVFSLDLSKRDVSTAMKSYADLTEFMIRY 152

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
             S YV  AR  +   RN +A+ E++   YYLKRG Y+ A+ R   VL N  D+   + A
Sbjct: 153 PESEYVDVARERLIFLRNLIASSELDGAEYYLKRGAYLGALNRANYVLKNIPDSSEKDRA 212

Query: 230 MARLVEAYVALALMDEAREVVS 251
           +  + EAY  L   + A E+V+
Sbjct: 213 LRIMKEAYEKLGYDEYAEEIVA 234


>gi|71082726|ref|YP_265445.1| putative competence lipoprotein ComL [Candidatus Pelagibacter
           ubique HTCC1062]
 gi|71061839|gb|AAZ20842.1| putative competence lipoprotein ComL [Candidatus Pelagibacter
           ubique HTCC1062]
          Length = 282

 Score =  194 bits (495), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 63/236 (26%), Positives = 116/236 (49%)

Query: 33  CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
            F+     ++ +   +  V       + Y++    L+  +   A + FN+    FP +  
Sbjct: 15  TFIWSCGDKTKKISEIVEVDMEMQMSDAYKEGYFELQRGDVLLAAKKFNEAELLFPQSPW 74

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           A KS +M+A+  Y+   Y  A    E Y+  YP  K+  Y ++L+GMS+ + I D   D 
Sbjct: 75  AAKSAIMAAYAYYTQYYYSDAIFELERYLVTYPNHKDKVYAHFLLGMSFYEQIVDEKKDL 134

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           ++     +    I+  Y ++ +   A+F + +    LAAKE+ I RYYLK+ +++ A+ R
Sbjct: 135 KSILDSKEQFETIIRDYPSTEFAMDAKFKIDLINEILAAKEMYIARYYLKKTKWIPALNR 194

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           F+ V+ +Y+   + EEA+ RLVE    L L++E+++  S +   Y    W +    
Sbjct: 195 FKTVVKDYNTTIYTEEALHRLVEINYRLGLINESKKYASTLGYNYQSSDWYKNSYK 250


>gi|317485235|ref|ZP_07944116.1| outer membrane assembly lipoprotein YfiO [Bilophila wadsworthia
           3_1_6]
 gi|316923526|gb|EFV44731.1| outer membrane assembly lipoprotein YfiO [Bilophila wadsworthia
           3_1_6]
          Length = 240

 Score =  194 bits (495), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 7/220 (3%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                  +E+YE A   ++E+N+S+A +Y+ +   +FPF+    ++ L      +  GKY
Sbjct: 27  PPPEDTAQELYEGANDAMQEKNYSQAAQYYTKLKDNFPFSPYTVEAELSLGDAFFLDGKY 86

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
            +AA   +E+ + +P  + + YV Y VGMS  +    V     +T+  L++  R+ E Y 
Sbjct: 87  PEAAEAYKEFESLHPRHEAIPYVLYQVGMSNLKSFISVDRPTTSTQEALEFFGRLRETYP 146

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA-EEA 229
           NS Y + +   +   R  LA  E+ +G  +     Y  A  R+  ++ N+ D       A
Sbjct: 147 NSEYAQKSVEEMKNCRRLLAEHELYLGDVFWNMNNYGPAWRRYTYIVDNFPDVPEVSAHA 206

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
             + + AY         RE  S       QG W R+ + L
Sbjct: 207 KEKALSAYYR------YREQQSQKAREQIQGSWKRWFDWL 240


>gi|88606744|ref|YP_505635.1| putative competence lipoprotein ComL [Anaplasma phagocytophilum HZ]
 gi|88597807|gb|ABD43277.1| putative competence lipoprotein ComL [Anaplasma phagocytophilum HZ]
          Length = 233

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 72/212 (33%), Positives = 113/212 (53%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
           S  V+ D   D      +Y++A +  +++ +  A    N+    +PF+ VA    LMSA 
Sbjct: 18  SGSVHADEAIDEGGVHGLYDRASVLFEKKKYKDAIAILNKIEALYPFSQVAIDGSLMSAE 77

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y  G Y++AA+L E YI  YP S  +DY YY+   S   ++ D+  D    K +L+Y 
Sbjct: 78  ANYELGNYREAATLVEGYIGIYPNSPVIDYAYYIRIASKYMLVPDLGLDDSIAKEVLEYA 137

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
           +  V+ +  S Y+   +  +   RN +AAKE   GR+Y+KRGEY+AAI RF  ++  Y D
Sbjct: 138 AEFVKMFPESEYLAPVQEKLGHLRNHVAAKEFLTGRFYMKRGEYIAAIKRFSTLVREYPD 197

Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
           + + +E M RL EAY A+   D A    +++ 
Sbjct: 198 SAYFQEGMYRLSEAYSAIGDKDTASVYTNMLA 229


>gi|78485715|ref|YP_391640.1| competence lipoprotein ComL [Thiomicrospira crunogena XCL-2]
 gi|78364001|gb|ABB41966.1| conserved hypothetical protein [Thiomicrospira crunogena XCL-2]
          Length = 256

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 53/221 (23%), Positives = 95/221 (42%), Gaps = 9/221 (4%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           ++        ++ Y  A    + + +  A  Y+ +    +P+   A +S L  A+  Y  
Sbjct: 22  VEKDESEWTVKDFYSHAKDAFESEQWESAIGYYEKLKAYYPYGKYAEQSYLELAYAYYRY 81

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMS---------YAQMIRDVPYDQRATKLM 158
            + + A    EE+I  YP+   + Y YYL  ++          + +      D  +T   
Sbjct: 82  DEPESAQRELEEFIRLYPKHAELAYAYYLRALAADSINKSWLDSWLTDPAMRDMASTTKA 141

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
            Q    ++ R+ NS Y   +R  + V RN+LA  E ++  YY KR  Y+AA  R + ++ 
Sbjct: 142 YQAYIDLLNRFPNSKYAAKSRERLIVLRNRLARHEYQVAEYYFKRQAYLAAANRAKQIIE 201

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           +Y  +    +A+  + EAY  L +   A  V S+I     Q
Sbjct: 202 SYPRSMVNMKALGLMKEAYAKLGMTQNADNVQSVIDLNTQQ 242


>gi|323697686|ref|ZP_08109598.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio sp. ND132]
 gi|323457618|gb|EGB13483.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio
           desulfuricans ND132]
          Length = 242

 Score =  192 bits (489), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 60/248 (24%), Positives = 107/248 (43%), Gaps = 11/248 (4%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           +  L     + +  L G     S              +E+YE  V  + E+++  A +YF
Sbjct: 2   RRLLAPVLIVVLLSLAGCMWIDS----YFLPPPEDTAQELYEAGVAAMDEKDYGDAQDYF 57

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
           ++    FPF+  + K  L      +    Y  A    +E+   +P ++N+ YV Y +  +
Sbjct: 58  SKLKDRFPFSPYSLKGELALGDAYFLDEDYVHALDAYKEFEALHPSNENIPYVLYQIANT 117

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
              M R +   Q   K  L+Y+ R+VE Y  S Y + A+  +   R  LA  EV +  ++
Sbjct: 118 DVSMFRTIDRRQENVKEGLEYLYRLVETYPKSQYAEAAKEMILKSRRILAEHEVFVADFF 177

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEE-AMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            +  +Y  A  R+Q V+ N+SD     + AM R   +Y       E ++ +S  +    Q
Sbjct: 178 WRTEQYGPAWHRYQYVVENFSDIPDLRDYAMKRAEYSYF------EYQKTLSEEERERIQ 231

Query: 260 GYWARYVE 267
           G W  +++
Sbjct: 232 GSWKLWLK 239



 Score = 35.9 bits (82), Expect = 6.3,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 49/128 (38%), Gaps = 22/128 (17%)

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
           D++       Y S++ +R+  SPY                  E+ +G  Y    +YV A+
Sbjct: 46  DEKDYGDAQDYFSKLKDRFPFSPYSLKG--------------ELALGDAYFLDEDYVHAL 91

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVAL--------ALMDEAREVVSLIQERYPQGYW 262
             ++   A +   E+    + ++    V++          + E  E +  + E YP+  +
Sbjct: 92  DAYKEFEALHPSNENIPYVLYQIANTDVSMFRTIDRRQENVKEGLEYLYRLVETYPKSQY 151

Query: 263 ARYVETLV 270
           A   + ++
Sbjct: 152 AEAAKEMI 159


>gi|46580246|ref|YP_011054.1| competence protein [Desulfovibrio vulgaris str. Hildenborough]
 gi|46449663|gb|AAS96313.1| competence protein, putative [Desulfovibrio vulgaris str.
           Hildenborough]
          Length = 260

 Score =  192 bits (489), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 63/270 (23%), Positives = 110/270 (40%), Gaps = 28/270 (10%)

Query: 1   MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
           M   L RA C+              + F ++ C ++          Y          +E+
Sbjct: 18  MRKTLLRAACMA------------ALTFMLSGCGII---------DYFYLPPPEDTAQEL 56

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YE     ++E+++  A + + +   ++PF+    ++ L  A   +   +Y  AA   +E+
Sbjct: 57  YESGNDAMREKDYVAAAQAYTRLKDNYPFSPYTIEAELSLADAYFLDEEYPAAAEAYKEF 116

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
            T +P  + + YV Y VGM+  +    V       +   QY  R+ E Y  + Y   A  
Sbjct: 117 ETLHPRHQAIPYVLYQVGMARLKSFISVDRPVNNVQEAYQYFQRLRESYPGTEYAAKAEE 176

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE-AMARLVEAYVA 239
           ++   R  LA +E+ I   Y + G+Y AA  R+  V  N+ D  HA E A  +   AY+ 
Sbjct: 177 HMKECRRLLAERELFIADVYWRTGKYGAAWQRYSFVRDNFKDVPHAVEYATEKANVAYLR 236

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                  RE  S       +G W ++ + L
Sbjct: 237 ------HREAQSENIREAREGSWKQWFKWL 260



 Score = 40.1 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 42/123 (34%), Gaps = 22/123 (17%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              Q  +R+ + Y  SPY   A              E+ +   Y    EY AA   ++  
Sbjct: 71  AAAQAYTRLKDNYPFSPYTIEA--------------ELSLADAYFLDEEYPAAAEAYKEF 116

Query: 217 LANYSDAEHAEEAMARLVEAYVA--------LALMDEAREVVSLIQERYPQGYWARYVET 268
              +   +     + ++  A +         +  + EA +    ++E YP   +A   E 
Sbjct: 117 ETLHPRHQAIPYVLYQVGMARLKSFISVDRPVNNVQEAYQYFQRLRESYPGTEYAAKAEE 176

Query: 269 LVK 271
            +K
Sbjct: 177 HMK 179


>gi|58584928|ref|YP_198501.1| DNA uptake lipoprotein [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
 gi|58419244|gb|AAW71259.1| DNA uptake lipoprotein [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
          Length = 237

 Score =  191 bits (487), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 71/242 (29%), Positives = 121/242 (50%), Gaps = 9/242 (3%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +YK  +T F  +   F   +          D V   + + E+YE+AV    ++ + +A  
Sbjct: 1   MYKALITCFIFLVCSFTRSYAS--------DDVHLEKSETELYEEAVELFDQKKYKQAIR 52

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            F +    +PF+  A K+ L+S    Y+   Y  AAS  ++YI  YP  +++ YVYYL  
Sbjct: 53  AFRKIEDLYPFSYWAMKAKLLSGISHYNMDDYSSAASDMDDYIYIYPNGEDLPYVYYLRV 112

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           +SY   I  V   Q+     L+  +  V  ++ S Y++  +  V +  + +  KE  IG+
Sbjct: 113 LSYYMQINRVQLGQQTAYKALELAAEYVNLFSESEYIEEMKEKVRLITDHILKKEYSIGK 172

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           +Y +RGEY+AAI RFQ ++++  D  +   ++  L+ AY AL L  EA +  SL+ E   
Sbjct: 173 FYFRRGEYLAAIKRFQNIISS-KDYSYFPRSINYLIAAYSALGLDLEAGQYESLLAENLK 231

Query: 259 QG 260
           + 
Sbjct: 232 EN 233


>gi|212702987|ref|ZP_03311115.1| hypothetical protein DESPIG_01025 [Desulfovibrio piger ATCC 29098]
 gi|212673575|gb|EEB34058.1| hypothetical protein DESPIG_01025 [Desulfovibrio piger ATCC 29098]
          Length = 243

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 51/251 (20%), Positives = 98/251 (39%), Gaps = 9/251 (3%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
              +  ++  ++A+  L G          +         +E++E     + E+N+ +A E
Sbjct: 2   FKNYLRSLTLALAIFSLSGCGIID----MIYLPPAEDTAQEIFEAGNDAMSEKNYVRAVE 57

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            +N+    +PF+     + L  A   Y   +Y  AA   +++ + +P  +   YV Y  G
Sbjct: 58  LYNKLRDTYPFSPYTVDAELALADAYYLDEEYVLAAETYKDFESLHPRHEATPYVIYQTG 117

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           MS  +  R +       +   +Y +R+ + Y +SPY K A   +   R  +A  E+ I  
Sbjct: 118 MSLMKQFRSIDRATTILQEAHEYFARLRQVYPDSPYAKDAEEKMHTCRRLMAEHELYIAD 177

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
            +    +Y  A  R++ V   + D      A     ++   LA     +E    +     
Sbjct: 178 VFWHMEKYGPAWRRYEYVSETFPDVPEV--ASHAKEKS---LAAYHNYKEEQGRLTREKR 232

Query: 259 QGYWARYVETL 269
           QG W  +   L
Sbjct: 233 QGSWRNWFTWL 243


>gi|255020043|ref|ZP_05292116.1| Probable component of the lipoprotein assembly complex (forms a
           complex with YaeT, YfgL, and NlpB) [Acidithiobacillus
           caldus ATCC 51756]
 gi|254970572|gb|EET28061.1| Probable component of the lipoprotein assembly complex (forms a
           complex with YaeT, YfgL, and NlpB) [Acidithiobacillus
           caldus ATCC 51756]
          Length = 209

 Score =  190 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 47/204 (23%), Positives = 90/204 (44%)

Query: 68  LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
           +   ++ +A   F     ++P+   A ++ L +A+  Y  G  + A +  + +I  +P +
Sbjct: 1   MDSGDYDRAIRDFQNLQAEYPYGPYAEQAQLDTAYAYYKQGDSKAAVAAADAFIKAHPVN 60

Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
            +VDY +YL G++  Q I    +D R     LQ    + + Y  S Y   AR ++    +
Sbjct: 61  PHVDYAWYLKGLAQYQAIEGAEFDPRPDYQALQTFRYVAKTYPKSAYALSARLHIAKIID 120

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
            L  + + I ++Y  R  +VAA  R   V+ +Y  +     A+  L  +Y  L L+  AR
Sbjct: 121 ILGERNLRICKFYYVRHAFVAAANRCVRVIRDYQLSPARNMALYYLARSYRRLDLLGLAR 180

Query: 248 EVVSLIQERYPQGYWARYVETLVK 271
               ++    P     + +  L +
Sbjct: 181 TTAIILHHNAPTAPETKKLRALWQ 204


>gi|86159785|ref|YP_466570.1| hypothetical protein Adeh_3366 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85776296|gb|ABC83133.1| tetratricopeptide repeat protein [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 262

 Score =  190 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 56/224 (25%), Positives = 106/224 (47%), Gaps = 8/224 (3%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           +   E Y+  +  LK  NF++A ++F      +PF+  A  S L  A V++   +Y +AA
Sbjct: 35  KTPEENYQAGMDELKADNFTEAVKFFEFVKTKYPFSKFAALSELRLADVKFKQDRYLEAA 94

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD--------VPYDQRATKLMLQYMSRIV 166
              ++++  +P  ++VDY  Y  G+SY +               DQR  +  +Q ++  V
Sbjct: 95  EAYKQFVQLHPTHEDVDYAEYRSGLSYFKDAPGEFALFPPAAEKDQRQAEKAVQVLTDFV 154

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
           +  T S Y+  A+  +   + +LAA+E  +  YY KR  +  A  R++ ++  Y  + H 
Sbjct: 155 QTRTQSKYLPDAKKVLGEAQTRLAAREWYVAEYYFKRSLWAGAAGRYETLVDRYPGSRHE 214

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
            EA+ +L  A + +     AR+ +  +  ++P        E L+
Sbjct: 215 PEALWKLASACLKMDEKHRARKALQQLIVKHPGDARRAEAEKLL 258


>gi|118581055|ref|YP_902305.1| hypothetical protein Ppro_2643 [Pelobacter propionicus DSM 2379]
 gi|118503765|gb|ABL00248.1| Tetratricopeptide TPR_2 repeat protein [Pelobacter propionicus DSM
           2379]
          Length = 246

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 48/244 (19%), Positives = 100/244 (40%), Gaps = 9/244 (3%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +      +F ++    L+    Q   ++ L+  TD     E+Y       ++  +  A  
Sbjct: 1   MKMGFRAVFAALCTLTLL----QGCAELKLNKPTD-----ELYRDGEASFQKGKYEDAVI 51

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            + +    FP   ++ +  +  A   +    Y +AA+  E +   +P  + + Y  Y  G
Sbjct: 52  QWRRVKESFPPPELSARVEINIADAYFLNKDYIEAAAEYENFRKLHPNHELMGYALYGQG 111

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           +S  + I+ +  DQ   K  L       + Y     +   +  +   R++    E+ +G+
Sbjct: 112 LSNFKQIKGIDTDQTPVKNALSLFESYTKLYPGGANLPDVQARIVDCRDKQLQYELYVGK 171

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           +YL+ G Y AAI RF+  L  + D   ++E +  L  AYV      + +EV + + + + 
Sbjct: 172 FYLRTGSYPAAIARFEEALKGFGDLPRSDETLFYLGSAYVENGQKPKGQEVYTRLLKEHA 231

Query: 259 QGYW 262
              +
Sbjct: 232 TSSF 235


>gi|220918604|ref|YP_002493908.1| outer membrane assembly lipoprotein YfiO [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219956458|gb|ACL66842.1| outer membrane assembly lipoprotein YfiO [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 262

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 106/224 (47%), Gaps = 8/224 (3%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           +   E Y+  +  LK  NF++A ++F      +PF+  A  S L  A V++   +Y +AA
Sbjct: 35  KTPEENYQAGMDELKADNFTEAVKFFEFVKTKYPFSKFAALSELRLADVKFKQDRYLEAA 94

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD--------VPYDQRATKLMLQYMSRIV 166
              ++++  +P  ++VDY  Y  G++Y +               DQR  +  +Q ++  V
Sbjct: 95  EAYKQFVQLHPTHEDVDYAEYRSGLAYFKDAPGDFALFPPASEKDQRQAEKAVQVLTDFV 154

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
           +  T S Y+  A+  +   + +LAA+E  +  YY KR  +  A  R++ ++  Y  + H 
Sbjct: 155 QTRTQSKYLADAKKVLAEAQTRLAAREWYVAEYYYKRSRWAGAAGRYETLVDKYPGSTHE 214

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
            EA+ +L  A + +     AR+ +  +  ++P        E L+
Sbjct: 215 PEALWKLASACLKMDEKHRARKALQTLIVKHPGDARRAEAEKLL 258


>gi|224368344|ref|YP_002602507.1| putative DNA uptake lipoprotein [Desulfobacterium autotrophicum
           HRM2]
 gi|223691060|gb|ACN14343.1| putative DNA uptake lipoprotein [Desulfobacterium autotrophicum
           HRM2]
          Length = 201

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 44/181 (24%), Positives = 82/181 (45%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
            +    +  +     ++Q++  A + F      +PF+  A  + L  A   +   +Y +A
Sbjct: 2   EKSAETLVREGSAQFRDQDYKYAIKSFTTLKDWYPFSKYAILAELKIADAHFQLEEYDEA 61

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
               +E+   +P+++ + YV Y  G  +   I  V  DQR         +R+V R+ ++P
Sbjct: 62  IFAYQEFENLHPKNEAIPYVIYQTGRCWFDRIDTVDRDQRCALKAQTEFNRLVHRFPDAP 121

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
               A  ++ V    LA  E+ +  +Y K   Y AA+ RF+ + ANY D    +EA+ R+
Sbjct: 122 ESAKAAQHIEVCIKSLAGHELYVAEFYFKAKHYKAAMKRFEHLFANYPDTREGKEALPRI 181

Query: 234 V 234
            
Sbjct: 182 A 182


>gi|120602370|ref|YP_966770.1| lipoprotein [Desulfovibrio vulgaris DP4]
 gi|120562599|gb|ABM28343.1| putative lipoprotein [Desulfovibrio vulgaris DP4]
 gi|311233769|gb|ADP86623.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio vulgaris
           RCH1]
          Length = 243

 Score =  189 bits (480), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 63/270 (23%), Positives = 110/270 (40%), Gaps = 28/270 (10%)

Query: 1   MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
           M   L RA C+              + F ++ C ++          Y          +E+
Sbjct: 1   MRKTLLRAACMA------------ALTFMLSGCGII---------DYFYLPPPEDTAQEL 39

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YE     ++E+++  A + + +   ++PF+    ++ L  A   +   +Y  AA   +E+
Sbjct: 40  YESGNDAMREKDYVAAAQAYTRLKDNYPFSPYTIEAELSLADAYFLDEEYPAAAEAYKEF 99

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
            T +P  + + YV Y VGM+  +    V       +   QY  R+ E Y  + Y   A  
Sbjct: 100 ETLHPRHQAIPYVLYQVGMARLKSFISVDRPVNNVQEAYQYFQRLRESYPGTEYAAKAEE 159

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE-AMARLVEAYVA 239
           ++   R  LA +E+ I   Y + G+Y AA  R+  V  N+ D  HA E A  +   AY+ 
Sbjct: 160 HMKECRRLLAERELFIADVYWRTGKYGAAWQRYSFVRDNFKDVPHAVEYATEKANVAYLR 219

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                  RE  S       +G W ++ + L
Sbjct: 220 ------HREAQSENIREAREGSWKQWFKWL 243



 Score = 39.3 bits (91), Expect = 0.58,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 42/123 (34%), Gaps = 22/123 (17%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              Q  +R+ + Y  SPY   A              E+ +   Y    EY AA   ++  
Sbjct: 54  AAAQAYTRLKDNYPFSPYTIEA--------------ELSLADAYFLDEEYPAAAEAYKEF 99

Query: 217 LANYSDAEHAEEAMARLVEAYVA--------LALMDEAREVVSLIQERYPQGYWARYVET 268
              +   +     + ++  A +         +  + EA +    ++E YP   +A   E 
Sbjct: 100 ETLHPRHQAIPYVLYQVGMARLKSFISVDRPVNNVQEAYQYFQRLRESYPGTEYAAKAEE 159

Query: 269 LVK 271
            +K
Sbjct: 160 HMK 162


>gi|258406026|ref|YP_003198768.1| outer membrane assembly lipoprotein YfiO [Desulfohalobium retbaense
           DSM 5692]
 gi|257798253|gb|ACV69190.1| outer membrane assembly lipoprotein YfiO [Desulfohalobium retbaense
           DSM 5692]
          Length = 244

 Score =  189 bits (480), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 47/234 (20%), Positives = 101/234 (43%), Gaps = 8/234 (3%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G     + D +     +    +E+ E     + E+++  A EYF +    +PF+     +
Sbjct: 18  GSMGCGTVDYFFLKPPE-DTAQELAEAGRAAMAEKDYDAAIEYFTKLKERYPFSPYTPDA 76

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
            L      +   +Y+ A    +E+ + +P  K + +V + +G++  +    +   Q   +
Sbjct: 77  ELALGDAYFLDEQYKAAVDTYKEFESLHPRHKAIPHVLFQIGLANFKQFDSIDRPQTNME 136

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             LQY  R+ + +  +PY + A  Y+T  R   A  E+ +  +Y +R ++ AA  R+  V
Sbjct: 137 EALQYFRRVQQGFPETPYAEKAGDYITQCRRYQAEHELFVADFYWRREDFGAAWKRYAYV 196

Query: 217 LANYSDAEHAEE-AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
              +++    ++ A  R   AY+        ++  S  +    QG W ++ + L
Sbjct: 197 AEEFAELPKIQDYARDRQEIAYLR------YQQHRSQTKREEEQGSWKQWFDWL 244


>gi|197123839|ref|YP_002135790.1| outer membrane assembly lipoprotein YfiO [Anaeromyxobacter sp. K]
 gi|196173688|gb|ACG74661.1| outer membrane assembly lipoprotein YfiO [Anaeromyxobacter sp. K]
          Length = 262

 Score =  188 bits (479), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 106/224 (47%), Gaps = 8/224 (3%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           +   E Y+  +  LK  NF++A ++F      +PF+  A  S L  A V++   +Y +AA
Sbjct: 35  KTPEENYQAGMDELKADNFTEAVKFFEFVKTKYPFSKFAALSELRLADVKFKQDRYLEAA 94

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD--------VPYDQRATKLMLQYMSRIV 166
              ++++  +P  ++VDY  Y  G++Y +               DQR  +  +Q ++  V
Sbjct: 95  EAYKQFVQLHPTHEDVDYAEYRSGLAYFKDAPGDFALFPPASEKDQRQAEKAVQVLTDFV 154

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
           +  T S Y+  A+  +   + +LAA+E  +  YY KR  +  A  R++ ++  Y  + H 
Sbjct: 155 QTRTQSKYLADAKKVLAEAQTRLAAREWYVAEYYYKRSRWAGAAGRYETLVDKYPGSAHE 214

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
            EA+ +L  A + +     AR+ +  +  ++P        E L+
Sbjct: 215 PEALWKLASACLKMDEKHRARKALQTLIVKHPGDARRAEAEKLL 258


>gi|242279291|ref|YP_002991420.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio salexigens
           DSM 2638]
 gi|242122185|gb|ACS79881.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio salexigens
           DSM 2638]
          Length = 243

 Score =  188 bits (479), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 56/249 (22%), Positives = 108/249 (43%), Gaps = 16/249 (6%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
            A  +F S++ C ++          Y          +E++E  V  +K++ +  A EYF+
Sbjct: 10  LASFLFISLSGCGVI---------DYYFLPKPEDTAQELFEAGVQAMKDKEYFDATEYFS 60

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
           +    +PF+    K+ +      +   KY  A+   +E+   +P +  + YV Y +G+S 
Sbjct: 61  KLKDRYPFSPYTVKAEISLGDAYFLDKKYFDASEAYKEFAALHPGNDEIPYVLYQIGLSN 120

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
             +   +   Q      L+Y  R+ E Y  + Y K A+ Y+   R  LA  E+ I  ++ 
Sbjct: 121 FNLFSSIDRPQSNITEALEYFYRVEEAYPETQYAKSAKEYIVKCRRALADHELYIADFFW 180

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEE-AMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           +  ++ +A  R+  V+ N+ D     + AM +   +Y       E ++ +S  +    QG
Sbjct: 181 RSSKFGSAWKRYAYVVRNFKDLPEVRKYAMKQAEMSYY------EYQKTLSQEERERLQG 234

Query: 261 YWARYVETL 269
            W   V+ L
Sbjct: 235 SWKELVDWL 243


>gi|317153532|ref|YP_004121580.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316943783|gb|ADU62834.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 242

 Score =  188 bits (479), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 50/221 (22%), Positives = 95/221 (42%), Gaps = 7/221 (3%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                  +E+YE  +  +  + +  A +YF++    FPF+  A ++ L      +    Y
Sbjct: 28  PPPEDTAQELYEAGMDAMGNKEYGDAQQYFSKLKDRFPFSPFALRAELALGDAYFLDADY 87

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    +E+   +P  +++ YV Y +G +   + R +   Q   +  L+Y  R+ E Y 
Sbjct: 88  LMALDSYKEFEALHPSHESIPYVLYQIGSADFNLFRSIDRRQENIQEGLEYFYRLRETYP 147

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE-A 229
           +S Y   +   +T GR  LA  EV +  ++ +  +Y  A  R+Q V+ N+SD     + A
Sbjct: 148 DSEYATASEDMITKGRRILAEHEVYVADFFWRTEQYGPAWNRYQYVVENFSDVPDLRDYA 207

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
             R   +Y          E + +      QG W  +++  +
Sbjct: 208 RKRAEYSYFEYQKTLSEEERLRI------QGSWKLWLKKWL 242


>gi|78357108|ref|YP_388557.1| putative lipoprotein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78219513|gb|ABB38862.1| putative lipoprotein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 243

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 55/254 (21%), Positives = 109/254 (42%), Gaps = 22/254 (8%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           +   L++  +++ C ++          Y          +E++E     ++E++++ A +Y
Sbjct: 8   FMVMLSLLATLSGCGII---------DYFFLPPPEDTAQELFESGNDAMREKDYASATDY 58

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
           F++   +FPF+  A ++ L      +   +Y  AA   +E+ T +P  K + YV + +G 
Sbjct: 59  FSKLKDNFPFSPYAIEAELSLGDAYFLDEEYAMAAEAYKEFETLHPRHKAIPYVLFQIGN 118

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           +  +    +   Q       +Y SR+ E Y  S Y + A   +   R  +A  E+ +  +
Sbjct: 119 ANLKSFVSIDRPQTNVAEAYEYFSRVRESYPGSEYAQKAGELLGECRRLMAEHELFVADF 178

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAE----HAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           Y + G++ +A  R+Q V   + D E    +AEE       AY+       A E  +    
Sbjct: 179 YWRTGKFRSAASRYQHVAQEFPDVEDLRAYAEEKGKI---AYLR------ATEEKAQQDR 229

Query: 256 RYPQGYWARYVETL 269
               G W ++ E L
Sbjct: 230 DRRHGSWKQWFEWL 243


>gi|319760322|ref|YP_004124260.1| putative lipoprotein [Candidatus Blochmannia vafer str. BVAF]
 gi|318039036|gb|ADV33586.1| putative lipoprotein [Candidatus Blochmannia vafer str. BVAF]
          Length = 261

 Score =  186 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 99/212 (46%), Gaps = 13/212 (6%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            ++Y+ A   L   N++++ +   + +   PF    ++  L   +  Y    +Q A +  
Sbjct: 49  SDLYKSAHDKLLHNNYTESIQKLLRLNNLHPFEPYPQQIYLDLIYAYYKLHDFQSANNFI 108

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRD-------------VPYDQRATKLMLQYMSR 164
           + +++ YP  KN+DYV Y+ G+    + ++               ++     +     S+
Sbjct: 109 QRFLSSYPNHKNLDYVLYMQGLINMNLDKNNSYFAHKYWHKSWFKHNPSYANIAFHSFSK 168

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           I++ + NS Y   A   + + +N++A  E+ I ++Y +R  Y++ I R + +L  + +  
Sbjct: 169 IIQNHPNSQYYIDAYKRLIILKNRIANYELAIIKFYDQRNSYISVILRSERMLRYFPNTP 228

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQER 256
              EA+  +  AY  ++L+D++  V  +I E 
Sbjct: 229 ATYEALYYMKRAYQKVSLLDQSNIVNKIISEN 260


>gi|148266018|ref|YP_001232724.1| DNA uptake lipoprotein-like protein [Geobacter uraniireducens Rf4]
 gi|146399518|gb|ABQ28151.1| DNA uptake lipoprotein-like protein [Geobacter uraniireducens Rf4]
          Length = 249

 Score =  186 bits (472), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 45/221 (20%), Positives = 91/221 (41%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
           V  V+     +++   F    N+  A   + +    F    ++    L  A   +    Y
Sbjct: 26  VPVVKTADTYFKEGEEFYASHNYEDAIAQWKKVKETFSSPELSTLVDLKIADAHFDNQSY 85

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
            +AA+  E++   +P  +   Y  Y +G+     I  +  DQ   K  +      +++Y 
Sbjct: 86  IEAAAAYEDFRKLHPNHEKAAYALYRLGLCNYNQISGIDTDQTPVKNAVNLFEAFLKQYP 145

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            S YV   +  + V   +    E+ +GR+YL+  +Y AA  R +  L  Y  +E  +E +
Sbjct: 146 KSEYVAEVKDKLDVCIMKQIEYEIYVGRFYLRTEKYAAATKRLEEALLKYPKSEFHDETL 205

Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
             L +AY       + RE  +L+ ++Y    +    + +++
Sbjct: 206 FYLGKAYFLSGDKVKGRETFNLLAKQYASSKYIEEAKQVME 246


>gi|302342571|ref|YP_003807100.1| outer membrane assembly lipoprotein YfiO [Desulfarculus baarsii DSM
           2075]
 gi|301639184|gb|ADK84506.1| outer membrane assembly lipoprotein YfiO [Desulfarculus baarsii DSM
           2075]
          Length = 280

 Score =  184 bits (469), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 52/248 (20%), Positives = 98/248 (39%), Gaps = 12/248 (4%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSS--------RDVYLDSVTDVRYQREVYEKAVLF 67
             +  +  +      A+  + G                            + +  +A   
Sbjct: 1   MSKALRLIIAAGMIAALGLVGGCSTVKGWVGNLGFGGGGDGAVEAFDTPAQVLATEAEQA 60

Query: 68  LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
            +E N+ +A E F Q    FP++  A  + L      +   +Y +A    E++I  +P++
Sbjct: 61  YQEGNYEEAAETFQQLKDRFPYSKFALLADLRLGDAYFKDERYDEAILAYEDFIRLHPKN 120

Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           + V Y  Y +GM Y + +     D    +  ++   +++  Y  + +   A         
Sbjct: 121 EGVPYAMYQIGMVYHEQMLTPDRDPTFARKAMEAFQKLMREYPKNEWSVKAVPRFQESAA 180

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA---YVALALMD 244
           + AA ++ +G++Y   G+Y AAI RF+ V+  Y D    +EAM+ L  A   Y    L +
Sbjct: 181 RAAAHDLAVGKFYYNTGKYPAAIYRFKRVMTQYPDVGLYDEAMSALQRAQADYDE-QLAE 239

Query: 245 EAREVVSL 252
           EA E   L
Sbjct: 240 EAEEYAGL 247



 Score = 42.0 bits (98), Expect = 0.077,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 37/122 (30%), Gaps = 22/122 (18%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              +   +   ++ +R+  S +   A   +              G  Y K   Y  AI  
Sbjct: 64  GNYEEAAETFQQLKDRFPYSKFALLADLRL--------------GDAYFKDERYDEAILA 109

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMD--------EAREVVSLIQERYPQGYWAR 264
           ++  +  +   E    AM ++   Y    L          +A E    +   YP+  W+ 
Sbjct: 110 YEDFIRLHPKNEGVPYAMYQIGMVYHEQMLTPDRDPTFARKAMEAFQKLMREYPKNEWSV 169

Query: 265 YV 266
             
Sbjct: 170 KA 171


>gi|297569607|ref|YP_003690951.1| outer membrane assembly lipoprotein YfiO [Desulfurivibrio
           alkaliphilus AHT2]
 gi|296925522|gb|ADH86332.1| outer membrane assembly lipoprotein YfiO [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 268

 Score =  184 bits (468), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 52/235 (22%), Positives = 97/235 (41%), Gaps = 18/235 (7%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
           V      +RD   ++  D R    +  + +    +  + +A E F      +PF+ V   
Sbjct: 28  VSGCGTKNRDQSPEAEQDPRAPELLAMEGMEKFNQARYRQALEIFKDLKERYPFSSVGVL 87

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           + L +A   Y   +Y +A  L +E+   +P ++ + YV + +GM + Q I  +  D    
Sbjct: 88  AELKAADATYYLRRYDEALPLYQEFENNHPTNEAIPYVMFQIGMCHYQRIGTIDRDPAHA 147

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
              +   +R+   + +SPY K A       R+ +A  E+ I  +YL   +Y  A  R   
Sbjct: 148 LNAIAAFTRLNRAFPDSPYRKEAEARTMAARDFMARHEMFIAGFYLNTKKYDQAERRLAY 207

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE-RYPQGYWARYVETL 269
           ++ NY ++E   EA                  EV++ ++    P+  W  +V  L
Sbjct: 208 LIDNYPESELIPEA-----------------EEVLAALEAGNPPRRNWRDFVPDL 245


>gi|94265668|ref|ZP_01289408.1| putative lipoprotein [delta proteobacterium MLMS-1]
 gi|93453795|gb|EAT04164.1| putative lipoprotein [delta proteobacterium MLMS-1]
          Length = 272

 Score =  182 bits (463), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 45/195 (23%), Positives = 87/195 (44%), Gaps = 3/195 (1%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
           +   C LV    Q+   ++ D          +    +  +   N+ KA + F++    +P
Sbjct: 25  TAGGCALV---EQTRTLLFGDRDRGAYTPEHLALDGLEEMNRGNYRKALKLFDEIKERYP 81

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
           F+ V   + L +A   +    Y++A  L +E+   +P ++ + YV + +GMS+ + I  +
Sbjct: 82  FSSVGPLAELKAADANFHLRNYREAHLLYQEFENNHPTNEAMPYVLFQMGMSHYRRIDTI 141

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
             D       +   SR+   Y +SPY + A   +   R+ LA  E+ +  +Y+K  EY  
Sbjct: 142 DRDPAHAINAVAAFSRLNRAYPDSPYREEAEARLLAARDFLARHEMFVATFYVKTKEYQQ 201

Query: 209 AIPRFQLVLANYSDA 223
           A  R   +L  Y ++
Sbjct: 202 AEGRLNHLLETYPES 216


>gi|116749145|ref|YP_845832.1| ComL family lipoprotein [Syntrophobacter fumaroxidans MPOB]
 gi|116698209|gb|ABK17397.1| lipoprotein, ComL family [Syntrophobacter fumaroxidans MPOB]
          Length = 258

 Score =  182 bits (463), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 46/215 (21%), Positives = 91/215 (42%), Gaps = 7/215 (3%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLD-------SVTDVRYQREVYEKAVLFL 68
             ++Y+FA  +     V    G         + D       S T  +   ++  + +  +
Sbjct: 8   IRKVYRFAAFVPLLSLVLVTGGCGTFLGEFYFGDLLGGKKSSSTVDKTAEQLAVEGMQKM 67

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           +++++  A + F +    +P++  A  + L      +   KY +AA   EE+   +P ++
Sbjct: 68  QKKDYDDALKAFRKLKEHYPYSKYAILAELKIGDALFHDKKYSEAAIAYEEFARLHPRNE 127

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
            V YV Y +GMS+         D   T+  ++   R+V+ +  S Y + A+  +   + +
Sbjct: 128 VVPYVLYQIGMSHFLTFTTTDRDPEETQAAIEAFQRVVQMFPQSDYARRAQKQLFECQKR 187

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
            AA E  +   Y + GEY A   R + +   YS A
Sbjct: 188 AAAHEFNVASLYYRMGEYFATRARLRTINEKYSTA 222


>gi|298504630|gb|ADI83353.1| outer membrane protein assembly lipoprotein YfiO, putative
           [Geobacter sulfurreducens KN400]
          Length = 254

 Score =  182 bits (462), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 48/252 (19%), Positives = 88/252 (34%), Gaps = 10/252 (3%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           LY   L     +A C L                   R    +  +A  F   + F  A  
Sbjct: 9   LYPTLLIPLLFVAGCGLFASST----------APVSRSPESMAREAEEFQSSRRFEDAIA 58

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            + +    +    +   + +  A  Q+ +G Y +AA+  EE+   +P  +   Y  Y  G
Sbjct: 59  QWRKVKESYISPELITLAEIKIADAQFDSGNYIEAAASYEEFRKLHPNHEKSAYALYRQG 118

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           +SY   I     DQ      +      +  Y  S Y +  R  +   R      E+ +G+
Sbjct: 119 LSYFNQIHGFDTDQTPVSNTVTIFESFLRLYPQSEYAEEVRNKLDAARQNQVQYEIYVGQ 178

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           +Y +  +Y +AI R +  L  Y  +   +E +  L +AY+        RE    +   + 
Sbjct: 179 FYYRTEKYTSAIKRLEDALKRYPRSPLHDETLYYLGKAYIKAGDKAGGREAFQRLFNEFR 238

Query: 259 QGYWARYVETLV 270
              +     + +
Sbjct: 239 TSKYVDEARSFL 250


>gi|153006273|ref|YP_001380598.1| tetratricopeptide domain-containing protein [Anaeromyxobacter sp.
           Fw109-5]
 gi|152029846|gb|ABS27614.1| Tetratricopeptide domain protein [Anaeromyxobacter sp. Fw109-5]
          Length = 258

 Score =  181 bits (461), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 63/252 (25%), Positives = 109/252 (43%), Gaps = 9/252 (3%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCSRD 86
              A+   V      S+ V            E  YE  V  LK  NFS+A ++F      
Sbjct: 3   LPAALALCVLLSACGSKRVSFSGQIKYEPTAEANYEAGVDELKHDNFSEAVKFFEYVRTK 62

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
           FPF+  A  S L  A +++   +Y +AA   ++++T +P  + V+Y    VG+SY +   
Sbjct: 63  FPFSKYAPLSELRLADLKFDQERYVEAAEAYQQFVTMHPTHEEVEYAELRVGLSYLRDAP 122

Query: 147 DV--------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
                       DQR  +   + +   V+   +S +   AR  +     +LA+ E  +G 
Sbjct: 123 GDFVLFPPAHEKDQRQVEKAARALRDFVQAKPDSKHAPQARKLLAEAEGRLASHEWYVGE 182

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           YY KR  +  A  R++ ++A Y  + H  EA+ +L  +Y+ +     AR  +  +  ++P
Sbjct: 183 YYFKRKRWAGAAGRYEALVAKYPGSRHEAEALMKLARSYLEIDEKHRARTALQKLIVKHP 242

Query: 259 QGYWARYVETLV 270
           Q       E L+
Sbjct: 243 QDPRRPEAEKLL 254


>gi|33519651|ref|NP_878483.1| putative lipoprotein [Candidatus Blochmannia floridanus]
 gi|33517314|emb|CAD83699.1| DNA uptake lipoprotein [Candidatus Blochmannia floridanus]
          Length = 246

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 102/250 (40%), Gaps = 20/250 (8%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           +    I  ++ +   +     S   +             +Y+ A   L + N+++A +  
Sbjct: 2   RILFYIILALNMIMTISCTTISHHKIPDQDT------NHLYKIAYNKLLQNNYTEAIQDL 55

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
                 + F    ++  L   +  Y +     A +    ++  YP  KN+DYV Y+ G+ 
Sbjct: 56  LYLKNLYLFEPCPQQIYLDLIYAYYKSNDLTSANNCINHFLNVYPNHKNLDYVLYIHGII 115

Query: 141 YAQMIRDVP--------------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
              + R+ P              ++     +     S++++ Y NS Y   +   +   +
Sbjct: 116 NMHLDRNNPFPLLIKHLYTCWFNHNPIHANIAFHSFSKLIQNYPNSQYAPDSYKRLIFLK 175

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
           N++A  ++ I ++Y K+  Y++ I R + +L  + D +   +A+  +  AY  + L+D+A
Sbjct: 176 NRIAYYKLAIIKFYDKKNAYISVITRSEEMLRYFPDTQATYQALHYMRRAYQNIHLIDQA 235

Query: 247 REVVSLIQER 256
             +  +I E 
Sbjct: 236 NIINQIITEN 245


>gi|239906803|ref|YP_002953544.1| hypothetical protein DMR_21670 [Desulfovibrio magneticus RS-1]
 gi|239796669|dbj|BAH75658.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 245

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 45/221 (20%), Positives = 96/221 (43%), Gaps = 7/221 (3%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                  +E+YE     + ++++  A  YF +    +PF+       +      +    Y
Sbjct: 31  PPPEDTAQELYEAGRQSMADKDYYGAINYFMKLKDRYPFSPYTPMGTVALGDAYFLTEDY 90

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             AA   +E+ + +P S+ + YV Y VG+S  +    +   Q   +  +QY   + + + 
Sbjct: 91  GMAAETYKEFESVHPRSEEIPYVLYQVGVSNFKRSESIDMPQSNLQEAIQYFYLLEQTFP 150

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE-A 229
           ++ Y K A  Y+   + ++A  E+ +  +Y +  +Y AA  R+   + NY D E   E A
Sbjct: 151 DTEYGKEAADYIRRCKKRMAEHELFVADFYWRTSQYGAAWKRYMYTVENYKDLEEVLEYA 210

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
             R   +Y+      E ++ ++  + +  +G W  + +  +
Sbjct: 211 KLRAELSYL------EYQKTLTENERQAIEGSWRHWTKRWL 245


>gi|303245508|ref|ZP_07331792.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio
           fructosovorans JJ]
 gi|302493357|gb|EFL53219.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio
           fructosovorans JJ]
          Length = 245

 Score =  180 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 96/223 (43%), Gaps = 11/223 (4%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                  +E+YE     + E+++  A ++F +    +PF+       +  A   +    Y
Sbjct: 31  PPPEDTAQELYEAGRQAMSEKDYYGAAKFFIKLKDRYPFSPYTPMGTIALADAYFLTEDY 90

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             AA   +E+ + +P S+ + YV Y +G+S  +    +   Q   +  LQY   + + + 
Sbjct: 91  GPAAETYKEFESVHPRSEEIPYVLYQIGVSNFKRSESIDMPQGNLQEALQYFYLLQQTFP 150

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
           ++ Y K A  Y+   R +LA  E+ +  +Y +  +Y AA  R+   + N+ D E      
Sbjct: 151 DTEYGKEAAEYIRRCRKRLAEHELFVADFYWRTDQYGAAWKRYMYTVENFKDLEEV---- 206

Query: 231 ARLVEAYVALALM---DEAREVVSLIQERYPQGYWARYVETLV 270
                AY  L       E ++ +S  + R  +G W  +++  +
Sbjct: 207 ----VAYSKLRAELSYLEYQKTLSEAERRKIEGSWHNWLKRWL 245


>gi|42521763|ref|NP_967143.1| competence protein ComL [Bdellovibrio bacteriovorus HD100]
 gi|39574293|emb|CAE77797.1| Competence protein ComL [Bdellovibrio bacteriovorus HD100]
          Length = 245

 Score =  180 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 53/251 (21%), Positives = 100/251 (39%), Gaps = 10/251 (3%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K    I    A+  LV                        +  A  + K + + +A  
Sbjct: 1   MLKTLRVIVILAALGTLVSCASTEKN---------SNTPEGAFAIAEEYDKSERYEEAIR 51

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            + +    FP++  A KS L  A V Y    Y +A    + +   +P   N DYV + +G
Sbjct: 52  RYTEVKNKFPYSNFATKSELAIADVYYKQESYAEAQVSYQMFKELHPTVPNSDYVQFRIG 111

Query: 139 MSYAQMIRD-VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
           MSY   +   +  D       +  +S ++++Y NS +V  A+   T     LA KE  I 
Sbjct: 112 MSYYNQLPSTIDRDLTLANDTILNLSDLIKKYPNSEFVNEAKEKRTAAIRMLAEKEEYIA 171

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
            +Y KR  + +A+ R++ +  NY       +A++R   +   +    +A++  +++   +
Sbjct: 172 DFYFKRKIFDSALGRYEGLYNNYRGLGFDAKALSRATISAQKIGDTAKAKKYEAVLARDF 231

Query: 258 PQGYWARYVET 268
           P     +  E 
Sbjct: 232 PGSRELKDAEK 242


>gi|39995608|ref|NP_951559.1| putative lipoprotein [Geobacter sulfurreducens PCA]
 gi|39982371|gb|AAR33832.1| lipoprotein, putative [Geobacter sulfurreducens PCA]
          Length = 254

 Score =  180 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 88/252 (34%), Gaps = 10/252 (3%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           LY   L     +A C L                   R    +  +A  F   + F  A  
Sbjct: 9   LYPTLLIPLLFVAGCGLFASST----------APVSRSPESMAREAEEFQSSRRFEDAIA 58

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            + +    +    +   + +  A  Q+ +G Y +AA+  EE+   +P  +   Y  Y  G
Sbjct: 59  QWRKVKESYISPELITLAEIKIADAQFDSGNYIEAAASYEEFRKLHPNHEKSAYALYRQG 118

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           +SY   I     DQ      +      +  Y  S + +  R  +   R      E+ +G+
Sbjct: 119 LSYFNQIHGFDTDQTPVSNTVTIFESFLRLYPQSEHAEEVRNKLDAARQNQVQYEIYVGQ 178

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           +Y +  +Y +AI R +  L  Y  +   +E +  L +AY+        RE    +   + 
Sbjct: 179 FYYRTEKYTSAIKRLEDALKRYPRSPLHDETLYYLGKAYIKAGDKAGGREAFQRLFNEFR 238

Query: 259 QGYWARYVETLV 270
              +     + +
Sbjct: 239 TSKYVDEARSFL 250


>gi|78224207|ref|YP_385954.1| putative lipoprotein [Geobacter metallireducens GS-15]
 gi|78195462|gb|ABB33229.1| lipoprotein, putative [Geobacter metallireducens GS-15]
          Length = 249

 Score =  180 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 42/217 (19%), Positives = 81/217 (37%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
            R    + + A  F     +  A   + +    +    +  ++ L  A  Q++   Y +A
Sbjct: 29  SRNPESMAKAAEEFQTSGRYEDAIAQWKKVRESYASPELTTEAELKIADAQFADKSYIEA 88

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
           A+  EE+   +P  +   Y  Y   +S  + I  +  DQ      +      +  Y +S 
Sbjct: 89  AASYEEFRKLHPNHEKAPYALYRQALSQYEQITGIDTDQTPVSNAVTLFESFLRIYPSSE 148

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
           Y    R  + V R +    E+ +GR+Y +  +Y AAI R +  L  Y  +   +E +  L
Sbjct: 149 YAAEVRDKLEVCRLKQVEHEIYVGRFYYRTDQYGAAIKRLEDALKKYPRSPAHDETLFYL 208

Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
             AY+      + R+    +   Y    +       +
Sbjct: 209 GSAYIRTGDKAKGRDAFQRLFAEYRTSKYVDEARKFM 245



 Score = 45.9 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 39/124 (31%), Gaps = 22/124 (17%)

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMS-----------AFV---QYSAGKYQQAASLGEE 119
           S A   F    R +P +  A +                 +V    Y   +Y  A    E+
Sbjct: 131 SNAVTLFESFLRIYPSSEYAAEVRDKLEVCRLKQVEHEIYVGRFYYRTDQYGAAIKRLED 190

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            + +YP S   D   + +G +Y +                    R+   Y  S YV  AR
Sbjct: 191 ALKKYPRSPAHDETLFYLGSAYIRTGDKA--------KGRDAFQRLFAEYRTSKYVDEAR 242

Query: 180 FYVT 183
            ++ 
Sbjct: 243 KFMD 246


>gi|283850645|ref|ZP_06367932.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio sp.
           FW1012B]
 gi|283573888|gb|EFC21861.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio sp.
           FW1012B]
          Length = 245

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 47/221 (21%), Positives = 96/221 (43%), Gaps = 7/221 (3%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                  +E+YE     + E+++  A  YF +    +PF+       +  A   +    Y
Sbjct: 31  PPPEDTAQELYESGRQAMSEKDYYGAIGYFMKLKDRYPFSPYTPMGTVALADAYFLTEDY 90

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             AA   +E+ + +P S+ + YV Y +G+S  +    +   Q   +  LQY   + + + 
Sbjct: 91  GPAAETYKEFESVHPRSEEIPYVLYQIGVSNFKRSESIDMPQGNLQEALQYFYLLEQTFP 150

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE-A 229
           ++ Y K A  Y+   R +LA  E+ +  +Y +  ++ AA  R+     N+ D E   E +
Sbjct: 151 DTDYGKEAAEYIRRCRKRLAEHELFVADFYWRTDQFGAAWKRYMYTAENFKDLEEVLEYS 210

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
             R   +Y+      E ++ ++  + R  +G W  + +  +
Sbjct: 211 KLRAELSYL------EYQKTLTETERRKIEGSWRNWAKRWL 245


>gi|222053859|ref|YP_002536221.1| outer membrane assembly lipoprotein YfiO [Geobacter sp. FRC-32]
 gi|221563148|gb|ACM19120.1| outer membrane assembly lipoprotein YfiO [Geobacter sp. FRC-32]
          Length = 244

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 97/245 (39%), Gaps = 14/245 (5%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
            + KF + +   I  C                    V+     +++   F   + +  A 
Sbjct: 2   NMKKFLVGLVLFITGCAGTS--------------ETVKTADTYFKEGEDFYASRRYEDAI 47

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
             + +    F    +   + L  A   +    Y +AA+  +++   +P      Y YY +
Sbjct: 48  AEWKKVKESFSSPELTTMAELKIADAYFENRSYIEAAAAYDDFRKLHPNHDQAAYAYYRL 107

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
            + Y   I  +  DQ   K  ++++   ++ Y  + YV  A+  +     +    EV +G
Sbjct: 108 ALCYYNQITGIDTDQTPVKNAVKFLDSFIKLYPKAEYVPEAKAKLDECIGKQVEYEVYVG 167

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
            +YL+ G+Y AAI R +  LA Y   E++++ +  + +AY       + +E  + + ++Y
Sbjct: 168 HFYLRSGKYQAAIKRLEETLAKYPKVENSDQVLFYIGKAYFLSGDKAKGKEAFNRLAKQY 227

Query: 258 PQGYW 262
               +
Sbjct: 228 VSSRY 232



 Score = 43.2 bits (101), Expect = 0.042,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 49/124 (39%), Gaps = 22/124 (17%)

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMS-----------AFV---QYSAGKYQQAASLGEE 119
             A ++ +   + +P A    ++                +V      +GKYQ A    EE
Sbjct: 126 KNAVKFLDSFIKLYPKAEYVPEAKAKLDECIGKQVEYEVYVGHFYLRSGKYQAAIKRLEE 185

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            + +YP+ +N D V + +G +Y                  +  +R+ ++Y +S Y++ AR
Sbjct: 186 TLAKYPKVENSDQVLFYIGKAYFLSGDKA--------KGKEAFNRLAKQYVSSRYLEEAR 237

Query: 180 FYVT 183
             + 
Sbjct: 238 QVME 241


>gi|218885504|ref|YP_002434825.1| lipoprotein [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218756458|gb|ACL07357.1| putative lipoprotein [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 246

 Score =  179 bits (455), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 13/223 (5%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                  +E++E     ++E+ + +A E F++    FPF+    ++ L  A   +    Y
Sbjct: 33  PPPEETAQELFEAGNDSMREKRYGEAAESFSKLKEQFPFSPYTIEAELSLADAHFLDEDY 92

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    +E+ T +P  + + YV Y VG S  +    +          +QY  R+ E Y 
Sbjct: 93  LLAGEAYKEFETLHPRHEAIPYVLYQVGQSRQKAFLSIDRPTTGLTEAIQYYQRLRESYP 152

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE----HA 226
            + Y + A+ ++T  R  LA +E+ IG ++ +   Y AA  R+  V+ N+ + E    HA
Sbjct: 153 GTEYAEKAKQHITECRRLLAERELYIGDFFWRAERYGAAWRRYVYVVENFPEIEDLRSHA 212

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
           EE       AY+        R+  S       +G W R+ + L
Sbjct: 213 EEKGKV---AYLK------YRQQQSQQVHEQREGSWKRWFKWL 246


>gi|298531012|ref|ZP_07018413.1| outer membrane assembly lipoprotein YfiO [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298509035|gb|EFI32940.1| outer membrane assembly lipoprotein YfiO [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 243

 Score =  179 bits (455), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 48/221 (21%), Positives = 98/221 (44%), Gaps = 7/221 (3%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
                   +E+ +  V  ++++ ++KA EYF+     FPF+     + +        +G 
Sbjct: 29  PEPLEDTPQELAQAGVDAMEQERYNKAIEYFSDLRDRFPFSPHTPTAEVALGDAYMKSGN 88

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y  A ++  E+    P  + + YV +  G+++      +   QR  +  L+Y  R+ + Y
Sbjct: 89  YDAAITVFTEFAEMNPRHEYMPYVLFRTGLAHFNKFTSIDRPQRNMQEALEYFRRVAQVY 148

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE-HAEE 228
             + Y + +R+Y    R ++A  E+ I  +Y +   Y +A  R++ V+ N+ D   + E 
Sbjct: 149 PETEYAEYSRYYKVQCRKKIAEHELYIADFYWRTKRYGSAYERYRYVMDNFEDLPEYVEY 208

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
           A  R   +Y         +E VS  +    +G W  +++ L
Sbjct: 209 AGERAKRSYYK------HQEHVSSHKRATEEGSWRDWLDWL 243


>gi|94986809|ref|YP_594742.1| DNA uptake lipoprotein [Lawsonia intracellularis PHE/MN1-00]
 gi|94731058|emb|CAJ54421.1| DNA uptake lipoprotein [Lawsonia intracellularis PHE/MN1-00]
          Length = 240

 Score =  178 bits (453), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 53/245 (21%), Positives = 101/245 (41%), Gaps = 11/245 (4%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           +   I + +L G         Y       +  +E+YE A   ++E+++++A EY+ +   
Sbjct: 6   VVLVIMLVYLPGCGIID----YFAVPRPEQTAQELYENAKDAMEEKHYAQAAEYYEKLKD 61

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
           ++P +    ++        +   KY +A    +E+ T +P   ++ YV Y +GMS  +  
Sbjct: 62  NYPLSPYTVEAERALGDALFFDEKYAEAVEAYKEFETLHPRHPDIPYVLYQIGMSNLKTF 121

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
             +     + +   +Y  R+ E + +SPY + A   +   R  +   E+ I   +   G+
Sbjct: 122 ISIDRPTTSIQEAYEYFQRVQETFPDSPYAEAAVNEMKACRLIMVEHELYIANVFWNMGK 181

Query: 206 YVAAIPRFQLVLANYSDAEHAEE-AMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
           Y  A  R+  +L N+SD     E    R + AY         R+  S  +     G W R
Sbjct: 182 YGPAWKRYTFILENFSDVPSVSEYTKERSLAAYF------LYRKQESQAEREQIHGSWKR 235

Query: 265 YVETL 269
               L
Sbjct: 236 LFNWL 240


>gi|77919977|ref|YP_357792.1| TPR domain-containing protein [Pelobacter carbinolicus DSM 2380]
 gi|77546060|gb|ABA89622.1| TPR domain protein [Pelobacter carbinolicus DSM 2380]
          Length = 245

 Score =  178 bits (453), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 105/248 (42%), Gaps = 8/248 (3%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
             I F    C L      +        V + +   E + +  L    +++  A + + + 
Sbjct: 3   FIIAFLSVACLLTACSTAT--------VPEAKTAEEYFNRGELAFANEDYQDAIKSYEKA 54

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +  A + R++ L  A   ++   Y +AA+  E+++ ++P +     V + +G SY  
Sbjct: 55  MEIYETAALNRRAELRIADAHFANKDYVEAAAGYEDFLKRHPGTPQSARVLFQLGESYFN 114

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
            I  +  DQ AT+  L     +++ Y ++P  + A   V   +N LAA E+ +G +Y K 
Sbjct: 115 QILAIDRDQTATRNALVTFESLIKIYPDAPESRIAPERVRACKNHLAANELYVGLFYYKF 174

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
            ++ AAI R   +L  Y +    ++    L   ++     + A      +   +P+   A
Sbjct: 175 EKHKAAIGRLTEMLDKYPECPDKDQVYYYLGRTFLDSGHPNLAVATFENLIADFPRSPLA 234

Query: 264 RYVETLVK 271
              +T+++
Sbjct: 235 AEAKTILR 242


>gi|256828931|ref|YP_003157659.1| outer membrane assembly lipoprotein YfiO [Desulfomicrobium
           baculatum DSM 4028]
 gi|256578107|gb|ACU89243.1| outer membrane assembly lipoprotein YfiO [Desulfomicrobium
           baculatum DSM 4028]
          Length = 237

 Score =  178 bits (451), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 45/194 (23%), Positives = 92/194 (47%), Gaps = 1/194 (0%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
            I   F++      + D Y  +  D    +E++E A  F++++ +++A +   + +  +P
Sbjct: 5   LILFSFVLLLNGCGAIDYYFLTPPD-DTAQELFENARGFMQDKEYAEAADSLTKLNDRYP 63

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
           F+  A ++ LM A       KY +A    EE++  +P  +++DYV + +G++     R +
Sbjct: 64  FSPYATEARLMLADAYALDSKYLEAVDAYEEFLNMHPRHESIDYVLFQIGVNKYNSHRSI 123

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
                     ++   R+V  Y  S Y + A  Y+   R  +A  E+ +  +Y K G Y A
Sbjct: 124 DLPHTQLGEAVESFRRLVSGYPKSIYREQALDYIVKCRKLMAEHEMFVADFYFKSGSYNA 183

Query: 209 AIPRFQLVLANYSD 222
           A  R+  ++ N+ +
Sbjct: 184 AWTRYVYIIDNFPE 197


>gi|213023739|ref|ZP_03338186.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 161

 Score =  177 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 61/168 (36%), Gaps = 17/168 (10%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +    FL G     S++   D+        E+Y  A   L++ N+ +A  
Sbjct: 1   MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWKQAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y       A +  + ++   P   N+DYV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVMYMRG 113

Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVK 176
           ++   +   V            D +  +      S++V  Y NS Y  
Sbjct: 114 LTNMALDDSVLQGFFGVDRSDRDPQHARAAFNDFSKLVRSYPNSQYTT 161


>gi|225630083|ref|YP_002726874.1| competence lipoprotein ComL, putative [Wolbachia sp. wRi]
 gi|225592064|gb|ACN95083.1| competence lipoprotein ComL, putative [Wolbachia sp. wRi]
          Length = 217

 Score =  177 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 68/229 (29%), Positives = 115/229 (50%), Gaps = 12/229 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +YK  +T F  +   F   +     +            + E+YE+AV    ++ + +A  
Sbjct: 1   MYKTLITCFIFLICSFTQSYADDLEK-----------TETELYEEAVELFDQKKYKQAIR 49

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            F++    +PF+  A K+ L+S    Y+ G Y  AAS  ++YI  Y   +++ YVYYL  
Sbjct: 50  AFHKIEDLYPFSYWAMKAKLLSGVSHYNMGNYSSAASDMDDYIYVYSNGEDLPYVYYLRV 109

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           +SY   I  V   Q+     L+  +  +  +  S YV   +    +    ++ KE  IG+
Sbjct: 110 LSYYMQINKVQLGQQTAYKTLELATEYINLFPGSEYVDEIKERAKLITEHISTKEYSIGK 169

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
           +YL+RGEY+AAI RFQ + A+Y D+++  +++  LV A+ AL L  EA 
Sbjct: 170 FYLRRGEYLAAIKRFQNM-ASYKDSKYFSKSINYLVAAHSALGLDLEAE 217


>gi|42520353|ref|NP_966268.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of
           Drosophila melanogaster]
 gi|42410091|gb|AAS14202.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of
           Drosophila melanogaster]
          Length = 235

 Score =  177 bits (450), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 68/235 (28%), Positives = 118/235 (50%), Gaps = 12/235 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +YK  +T F  +   F   +     +            + E+YE+AV    ++ + +A  
Sbjct: 1   MYKTLITCFIFLICSFTQSYADDLEK-----------TETELYEEAVELFDQKKYKQAIR 49

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            F++    +PF+  A K+ L+S    Y+ G Y  AAS   +YI  Y   +++ YVYYL  
Sbjct: 50  AFHKIEDLYPFSYWAMKAKLLSGVSHYNMGNYSSAASDMADYIYVYSNGEDLPYVYYLRV 109

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           +SY   I  V   Q+     L+  +  +  +  S YV   +    +    ++ KE  IG+
Sbjct: 110 LSYYMQINKVQLGQQTAYKTLELATEYINLFPGSEYVDEIKERAKLITEHISTKEYSIGK 169

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +YL+RGEY+AAI RFQ + A+Y D+++  +++  L+ A+ AL L  EA +  S++
Sbjct: 170 FYLRRGEYLAAIKRFQNM-ASYKDSKYFSKSINHLIAAHSALGLDLEAEQYESML 223


>gi|225677404|ref|ZP_03788371.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
 gi|225590548|gb|EEH11808.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
          Length = 235

 Score =  176 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 67/235 (28%), Positives = 116/235 (49%), Gaps = 12/235 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +YK  +T F  +   F   +     +            + E+YE+AV    ++ + +A  
Sbjct: 1   MYKTLITCFIFLICSFTQSYADDLEK-----------TETELYEEAVELFDQKKYKQAVR 49

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            F++    +PF+  A K+ L+S    Y+ G Y  AAS   +YI  Y   +++ YVYYL  
Sbjct: 50  AFHKIEDLYPFSYWAMKAKLLSGVSHYNMGNYSSAASDMADYIYVYSNGEDLPYVYYLRV 109

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           +SY   I  V   Q+     L+  +  +  +  S YV   +    +    ++ KE  IG+
Sbjct: 110 LSYYMQINKVQLGQQTAYKTLELATEYINLFPGSEYVGEIKEKAKLITEHISTKEYSIGK 169

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +YLKRGEY+AAI RFQ  + +Y D+++  +++  L+ A+ AL L  E  +  S++
Sbjct: 170 FYLKRGEYLAAIKRFQN-IESYKDSKYFSKSINYLIAAHSALGLDLEVEQYESML 223


>gi|297171549|gb|ADI22547.1| DNA uptake lipoprotein [uncultured Oceanospirillales bacterium
           HF0500_09M11]
          Length = 187

 Score =  176 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 10/160 (6%)

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP----------YDQRATKLMLQYMSRI 165
             + ++  YP  + +DY  Y+ G++   M R              D  + +   +   R+
Sbjct: 3   AAQRFMRSYPAHQRLDYALYMRGLANFYMERGFFDSMMNTDKSARDLSSARDAFEDFERL 62

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           V R+ +S Y + AR  +   RN+ A  E+   RYY +RG Y+AAI R Q V+ +Y     
Sbjct: 63  VTRFPDSEYSEDARARMVFIRNEFARHELHAARYYARRGAYIAAIGRAQYVVQHYQQTPL 122

Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
             EA+A +V+ Y  L     A +   ++   +P   +   
Sbjct: 123 VPEALAIMVKGYERLDRPALADKSRRILATNWPDSEYLED 162



 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/117 (15%), Positives = 36/117 (30%), Gaps = 22/117 (18%)

Query: 75  KAYEYFNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEY 120
            A+E F +    FP +  +  +               L +A      G Y  A    +  
Sbjct: 54  DAFEDFERLVTRFPDSEYSEDARARMVFIRNEFARHELHAARYYARRGAYIAAIGRAQYV 113

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           +  Y ++  V           A M++      R   L  +    +   + +S Y++ 
Sbjct: 114 VQHYQQTPLVPEAL-------AIMVKGYERLDRPA-LADKSRRILATNWPDSEYLED 162


>gi|115377512|ref|ZP_01464712.1| NrfG protein, putative [Stigmatella aurantiaca DW4/3-1]
 gi|310820081|ref|YP_003952439.1| competence lipoprotein ComL [Stigmatella aurantiaca DW4/3-1]
 gi|115365452|gb|EAU64487.1| NrfG protein, putative [Stigmatella aurantiaca DW4/3-1]
 gi|309393153|gb|ADO70612.1| competence lipoprotein ComL [Stigmatella aurantiaca DW4/3-1]
          Length = 258

 Score =  176 bits (447), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 53/258 (20%), Positives = 103/258 (39%), Gaps = 11/258 (4%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           +  +T   +  +           +    D          +       L+ +++ KA +YF
Sbjct: 2   RLTVTCLTTFLLLSTGCASLSERQAGDPDYAAQADENLRL---GSEALEGRDYFKAEKYF 58

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
                 FP+   ++ + L  A V +   ++ +A      +I  YP    VDY  Y V +S
Sbjct: 59  EFVKTKFPYLEASKTAELRLADVDFVQDRFPEAREKYNAFIKAYPTHPQVDYAAYQVALS 118

Query: 141 YAQMIRDV--------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
           + + +             DQ   +  L+ ++  + +Y +S Y   AR      + +LA  
Sbjct: 119 HVEDMPSDFFLLPPSEEKDQTEVQSALRALNDFLRQYPDSQYTPQARVQADDAKRRLAEH 178

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           E+ +  +Y KR  + A   R + +L+ Y   ++ E A+  L EAYV L     A+E +  
Sbjct: 179 ELYVAAFYRKRERWRAVAQRLEGMLSRYPGTKYEESALFSLHEAYVKLKEPTRAQETLRQ 238

Query: 253 IQERYPQGYWARYVETLV 270
           + +R P    A   + ++
Sbjct: 239 VIQRLPGTPAAERAQRML 256


>gi|308272037|emb|CBX28645.1| hypothetical protein N47_G39690 [uncultured Desulfobacterium sp.]
          Length = 218

 Score =  176 bits (446), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 42/213 (19%), Positives = 89/213 (41%), Gaps = 8/213 (3%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           + + F I      G     ++          +  +E  ++ ++  +++ + +A E F + 
Sbjct: 8   VILLFCIMAFACYGCATLDTKKE--------KSAKEYADEGMVSFQDKEYKRAIESFQKI 59

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              +PF+     + L  A   Y   +Y +A +   E+   +P ++ V YV +  G+ Y +
Sbjct: 60  KDWYPFSNYLVLADLKIADSHYMLKQYNEAVAAYNEFEKLHPANEAVPYVIFQTGLCYFE 119

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
            +      Q   +  ++   R+ +++  + Y    R  + +    LA  E+ IG +Y K 
Sbjct: 120 QVDTFDRQQATARKAIEIFMRLNKQFPKNIYETKTRECINICYKTLAESELGIGLFYYKS 179

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
             Y AA+ RF+ VL  Y D     +A+  +   
Sbjct: 180 KYYKAALYRFRNVLTKYPDTGVHHQAIIYIARC 212


>gi|218780247|ref|YP_002431565.1| outer membrane assembly lipoprotein YfiO [Desulfatibacillum
           alkenivorans AK-01]
 gi|218761631|gb|ACL04097.1| outer membrane assembly lipoprotein YfiO [Desulfatibacillum
           alkenivorans AK-01]
          Length = 266

 Score =  176 bits (446), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 43/183 (23%), Positives = 84/183 (45%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           +  +   E+    + + ++ ++++A E F +    +PF+  A  + L  A   +    Y+
Sbjct: 24  SKEKPAEELAADGIRYYEKGDYTQAIESFEKLKDWYPFSKYAILAELKLADSYFKRKNYE 83

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            A    E + + +P +  + YV + +GM Y +       DQ AT+  L+   R+   Y  
Sbjct: 84  DAIYAYEYFESLHPRNDAIPYVIFQIGMCYFEQKALPDRDQTATESALENFLRLTREYPA 143

Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
           S     A  ++ + +  LA  ++ +G YY K  E+ AA  RF+ +LA Y D     +A+ 
Sbjct: 144 SAEAAMALEHIKICQETLARHDLFVGAYYFKAKEFHAARVRFRDILAAYPDVGVHRQALE 203

Query: 232 RLV 234
            + 
Sbjct: 204 YVA 206


>gi|328951914|ref|YP_004369248.1| outer membrane assembly lipoprotein YfiO [Desulfobacca acetoxidans
           DSM 11109]
 gi|328452238|gb|AEB08067.1| outer membrane assembly lipoprotein YfiO [Desulfobacca acetoxidans
           DSM 11109]
          Length = 241

 Score =  175 bits (444), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 47/222 (21%), Positives = 87/222 (39%), Gaps = 7/222 (3%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           +  ++      G    S +          +    + ++ +  L++  +  A + F +   
Sbjct: 11  VITAMLFSLTAGCGWFSKKK-------PEQPPETLVQEGMKKLRKGKYEDAVDAFEKLKD 63

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
            +P++  A  + L  A  +Y   KY +A    +E+   +P ++ + YV Y  GM Y +  
Sbjct: 64  RYPYSDEALLASLKVADAKYYNKKYDEALLDYKEFEKLHPTNQIIPYVIYQQGMCYYRQR 123

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
             +  D   T   +Q   R+ ERY     +  A  Y+    N+LA  E  +G +Y K   
Sbjct: 124 STIDRDPTYTVKAVQEYRRLKERYPQYEKISKAEDYMDKCLNELADHEYYVGEFYFKNKH 183

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
           Y AA+ RF ++   Y D          +      LA   +A 
Sbjct: 184 YQAALERFAIIEQEYPDYLKMPRVKQYMARCEDILANPVKAE 225


>gi|327399434|ref|YP_004340303.1| outer membrane assembly lipoprotein YfiO [Hippea maritima DSM
           10411]
 gi|327182063|gb|AEA34244.1| outer membrane assembly lipoprotein YfiO [Hippea maritima DSM
           10411]
          Length = 251

 Score =  174 bits (443), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 98/246 (39%), Gaps = 4/246 (1%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
                I    L G          +    + +   E Y + +      ++S+A       +
Sbjct: 5   IALLGICAIALAGCSSHKK----IIPKEEEKPAYEWYNEGIQDYINHDYSEAEHALTMIN 60

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
              P +  A+++ +    V ++ G+Y  A     ++I  YP SK   Y  Y + +S+ + 
Sbjct: 61  AQHPGSIYAKRATIALGDVYFAKGEYILARDYYRKFIKLYPNSKEAVYAKYHIALSFYKA 120

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
                 D    +  ++    ++++Y N+PY     +Y+T    +L   E+ + ++Y    
Sbjct: 121 RNGYKCDATPVREAIKEFLDLLDKYPNNPYKDKIYYYITKSVEELYKHELFVAKFYADLD 180

Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
           E+ AA  R   +  ++ +    +E +  L + Y  L    +A+E    + ++YP   +A 
Sbjct: 181 EFNAAKNRLNYMYKHFKNVNFNDEMLFLLGKVYYHLGKKQQAKEFFKELIKKYPNSDYAG 240

Query: 265 YVETLV 270
             +  +
Sbjct: 241 KAKEFI 246



 Score = 41.3 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 20/172 (11%), Positives = 52/172 (30%), Gaps = 51/172 (29%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-----KYQQAASLGE 118
             ++  +  +  A +Y+ +  + +P +  A  +    A   Y A               +
Sbjct: 77  GDVYFAKGEYILARDYYRKFIKLYPNSKEAVYAKYHIALSFYKARNGYKCDATPVREAIK 136

Query: 119 EYITQ---YPESKNVDYVYYLVGMS------------------------------YAQMI 145
           E++     YP +   D +YY +  S                                +  
Sbjct: 137 EFLDLLDKYPNNPYKDKIYYYITKSVEELYKHELFVAKFYADLDEFNAAKNRLNYMYKHF 196

Query: 146 RDVPYDQRAT-------------KLMLQYMSRIVERYTNSPYVKGARFYVTV 184
           ++V ++                 +   ++   ++++Y NS Y   A+ ++  
Sbjct: 197 KNVNFNDEMLFLLGKVYYHLGKKQQAKEFFKELIKKYPNSDYAGKAKEFINE 248


>gi|67809654|gb|AAY81973.1| putative competence lipoprotein [Wolbachia pipientis]
          Length = 209

 Score =  174 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 111/200 (55%), Gaps = 1/200 (0%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
            + + E+YE+AV    ++ ++KA   F++    +PF+  A K+ L+S    Y+ G Y  A
Sbjct: 6   EKTETELYEEAVELFDQKKYNKAIRAFHKIEDLYPFSYWAMKAKLLSGVSHYNMGNYSSA 65

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
           AS  ++YI  Y   +++ YVYYL  +SY   I  V   Q+     L+  +  +  +  S 
Sbjct: 66  ASDMDDYIYVYSNGEDLPYVYYLRVLSYYMQINKVQLGQQTAYKTLELATEYINLFPGSE 125

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
           YV   +    +    ++ KE  IG++YL+RGEY+AAI RFQ + A+Y D+++  +++  L
Sbjct: 126 YVDEIKERAKLITEHISTKEYSIGKFYLRRGEYLAAIKRFQNM-ASYKDSKYFSKSINYL 184

Query: 234 VEAYVALALMDEAREVVSLI 253
           + A+ AL L  EA +  S++
Sbjct: 185 IAAHSALGLDLEAEQYESML 204


>gi|108757392|ref|YP_630233.1| putative competence lipoprotein ComL [Myxococcus xanthus DK 1622]
 gi|108461272|gb|ABF86457.1| putative competence lipoprotein ComL [Myxococcus xanthus DK 1622]
          Length = 261

 Score =  174 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 57/254 (22%), Positives = 102/254 (40%), Gaps = 10/254 (3%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
             F S  + F  G    +           V  +          L+ ++F +A +YF    
Sbjct: 8   VAFLSAFLLFGTGCASLTQGQAGEPDYAAVADENL--RLGSEALENKDFFRAQKYFEYVR 65

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY--- 141
             FP+   AR++ L  A V +    + +A    + +I  +P    VDY  +   M++   
Sbjct: 66  TKFPYQEAAREAELKLADVDFEREAFPEAKEQYQSFIKLHPTHAKVDYAAFRSAMTHVRA 125

Query: 142 -----AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
                  +      DQ   +  L  M   + +Y  S YV  A+      R +LA+ E+  
Sbjct: 126 YPSEFFALPPSREKDQGEIRSALVAMEEFLRQYPQSQYVAEAKTQREDARRRLASHELYA 185

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            ++Y KR  + A   R + +L  Y   E+ EEA+  L +AYV L   ++A++ +  +  R
Sbjct: 186 AQFYQKRERWKAVAQRLEGLLRRYPGTEYEEEALFDLHDAYVKLNDTEKAQDTLRQVLRR 245

Query: 257 YPQGYWARYVETLV 270
            P    A   + ++
Sbjct: 246 LPGTPAAERAQRML 259



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/81 (12%), Positives = 27/81 (33%), Gaps = 1/81 (1%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            E+Y  A  + K + +    +      R +P      ++L             ++A    
Sbjct: 181 HELYA-AQFYQKRERWKAVAQRLEGLLRRYPGTEYEEEALFDLHDAYVKLNDTEKAQDTL 239

Query: 118 EEYITQYPESKNVDYVYYLVG 138
            + + + P +   +    ++G
Sbjct: 240 RQVLRRLPGTPAAERAQRMLG 260


>gi|322421378|ref|YP_004200601.1| outer membrane assembly lipoprotein YfiO [Geobacter sp. M18]
 gi|320127765|gb|ADW15325.1| outer membrane assembly lipoprotein YfiO [Geobacter sp. M18]
          Length = 260

 Score =  172 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 83/209 (39%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           +    +     +++       ++F +A   F +    +    ++ ++ L  A   +    
Sbjct: 24  APAPAKSAESYFKEGEAAYASRHFEEAITQFKKVKESYSSPELSAQAELKIADAYFENDA 83

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           + +AA+  E +   +P ++ V Y  Y   +S    I  +  DQ   K  + Y+   + +Y
Sbjct: 84  FIEAAAEYESFRKLHPTNEKVPYALYRQALSNYSQITGIDTDQTPVKNAVHYLEMFLAQY 143

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
             S +   AR  ++  R +  A E  +G +Y++  +Y +AI R    L  +       + 
Sbjct: 144 PGSEHAADARAKLSDCRAKELAYENYVGNFYVRTKKYPSAIKRLNEALERFPGEPGLADT 203

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYP 258
           ++ L +AY        A E    +   YP
Sbjct: 204 LSYLEQAYRKSGDAARAEEARKRLAAEYP 232


>gi|255610036|ref|XP_002539124.1| Competence lipoprotein comL precursor, putative [Ricinus communis]
 gi|223508511|gb|EEF23259.1| Competence lipoprotein comL precursor, putative [Ricinus communis]
          Length = 169

 Score =  172 bits (436), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 9/148 (6%)

Query: 123 QYPESKNVDYVYYLVGMSYAQ---------MIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
            +P   N+DY YYL G++                   D +  ++       +VER+  S 
Sbjct: 1   LHPNHPNLDYAYYLKGLATFNERGIMEKYTKQEINDRDPKTLRVSFNAFKELVERFPTSR 60

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
           Y K +   +    N LA  E+ + RYY++R  YVAA+ R + VL  Y ++   E+A+  +
Sbjct: 61  YAKDSTQRMVYLVNTLAMHEMHVARYYMQRKAYVAALNRTRYVLETYPNSSSVEDALVTM 120

Query: 234 VEAYVALALMDEAREVVSLIQERYPQGY 261
           + AY A+ + D   + + +++  YP+  
Sbjct: 121 ISAYDAMDMADLKADTLRILKTNYPENP 148


>gi|284105818|ref|ZP_06386222.1| DNA uptake lipoprotein-like protein [Candidatus Poribacteria sp.
           WGA-A3]
 gi|283830105|gb|EFC34371.1| DNA uptake lipoprotein-like protein [Candidatus Poribacteria sp.
           WGA-A3]
          Length = 329

 Score =  171 bits (435), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 94/256 (36%), Gaps = 23/256 (8%)

Query: 16  AYQLYKFALTIF-FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
              +++  +T+F  S+  C  +G    S       S    R   +++    + +      
Sbjct: 1   MPHVFRHPVTLFILSVTSCLTLGCSMFSDNKTPAPSTDAGRTDAQIFVGDTIEMN----- 55

Query: 75  KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
                                 ++  A   +    Y +A    + ++  +       Y  
Sbjct: 56  -----------------YDPNVIMKRAESFHEKEGYAEAIVEYQHFLDLHRNHILAPYAQ 98

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
           Y + +S+ +MI+ +  D    K   +    ++  +  S Y   AR  +   +  LA    
Sbjct: 99  YRLALSHFKMIQTIDRDMTPVKKAQEEFWELIHGFPASQYEAEARVKIKECQGLLAKNHF 158

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
            +G++Y  R +Y+AA  RF+ ++  Y   E A E+   L + Y  L  +D AR+    + 
Sbjct: 159 FVGKFYYHREQYLAAAKRFEKIIIGYPSTEEAIESKLELAKTYQQLGALDWARDWAVELV 218

Query: 255 ERYPQGYWARYVETLV 270
           +++P+         L+
Sbjct: 219 QQHPRHQLRGDGLKLL 234


>gi|253699141|ref|YP_003020330.1| outer membrane assembly lipoprotein YfiO [Geobacter sp. M21]
 gi|251773991|gb|ACT16572.1| outer membrane assembly lipoprotein YfiO [Geobacter sp. M21]
          Length = 256

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 93/246 (37%), Gaps = 9/246 (3%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           +     +C +                T ++     +++       +N+++A E + +   
Sbjct: 9   LALCSVLCLISACAST---------PTPIKSADAYFKEGEAAYASRNYAEAIESWKKVKE 59

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
                 +  ++ L  A   +    Y +AA+  E++   +P      Y  Y + +S+ Q I
Sbjct: 60  SDTSPELTSQAELKIADAHFENKAYIEAAAAYEDFRKLHPTHPQAPYALYRLALSHYQQI 119

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
                DQ   K  +  +   + +Y  S Y       +   R++  A E  +G +YL+  +
Sbjct: 120 AGTDTDQTPVKNAVATLEAFLGQYPRSEYAPELSKKLADCRDKQLAYENYVGNFYLRSEK 179

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
           Y +AI R    L  +      ++ +  L +AY+    + + + V+  +   +P     R 
Sbjct: 180 YQSAIKRLNEALVRFPGLTRLDDTLFYLGKAYLKAGELQQGKVVLQRLAAEHPASPRNRE 239

Query: 266 VETLVK 271
              L++
Sbjct: 240 AAALLQ 245


>gi|197116873|ref|YP_002137300.1| outer membrane protein assembly lipoprotein YfiO [Geobacter
           bemidjiensis Bem]
 gi|197086233|gb|ACH37504.1| outer membrane protein assembly lipoprotein YfiO, putative
           [Geobacter bemidjiensis Bem]
          Length = 256

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 94/246 (38%), Gaps = 9/246 (3%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           +    A+C +                  V+     +++       +N+++A E + +   
Sbjct: 9   LALCSALCLISACAST---------PAPVKSADAHFKEGEAAYASRNYAEAIESWKKVKE 59

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
                G+  ++ L  A   +    Y +AA+  E++   +P      Y  Y + +S+ Q I
Sbjct: 60  SDTAPGLTSQAELKIADAHFENKAYIEAAAAYEDFRKLHPTHPQAPYALYRLALSHYQQI 119

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
                DQ   K  +  +   + +Y  S Y       +   R++  A E  +G +YL+  +
Sbjct: 120 TGTDTDQTPVKNAVATLEAFLGQYPRSEYAPELSGKLADCRDKQLAYENYVGNFYLRTEK 179

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
           Y +AI R    L  +      ++ +  L +AY+    + + + V+  +   +P     + 
Sbjct: 180 YQSAIKRLNEALVRFPGLTRLDDTLFYLGKAYLKAGDVKQGKVVLQRLAAEHPGSPRNKE 239

Query: 266 VETLVK 271
              L++
Sbjct: 240 AAALLQ 245


>gi|94676731|ref|YP_588649.1| hypothetical protein BCI_0192 [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|94219881|gb|ABF14040.1| conserved hypothetical protein [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 231

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 79/196 (40%), Gaps = 12/196 (6%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             E Y  A   L++  + +A +        + F    ++  L   +  Y     Q+A +L
Sbjct: 31  PAETYASARQKLQQGYYKQAIKQLEALDNYYMFGPNTQQLQLDLIYAYYKLSNMQKAQNL 90

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQM------------IRDVPYDQRATKLMLQYMSR 164
            + ++       N DYV Y+ G+   ++                  D +  +  +    +
Sbjct: 91  IDRFLRTNANHSNTDYVLYICGLIEMKLDEQALSKYFLFGFNHFERDPKHARAAVISFQQ 150

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           ++  Y +S Y   A+  +   +N+LA  E+ +  +Y K G YVA + R + +L+N+ +  
Sbjct: 151 LINNYPHSIYAIDAKKILIYLQNRLANYELTVIEFYSKVGAYVAVVTRVKHMLSNFPNNN 210

Query: 225 HAEEAMARLVEAYVAL 240
              +A   +  AY  L
Sbjct: 211 ATYQARKHMERAYQQL 226


>gi|95929334|ref|ZP_01312077.1| lipoprotein, putative [Desulfuromonas acetoxidans DSM 684]
 gi|95134450|gb|EAT16106.1| lipoprotein, putative [Desulfuromonas acetoxidans DSM 684]
          Length = 252

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 50/218 (22%), Positives = 94/218 (43%), Gaps = 1/218 (0%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +       S       RE+ +K  + ++++++  A E++ +    F    +   + L
Sbjct: 17  CSSNKSATQTASPATSEAMREL-QKGEIAMEKEHYLAAIEHWQKVRDSFTSPELTALAEL 75

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
                 Y+   Y  A +  E+++ ++P       V Y +G S+   +     DQ AT+  
Sbjct: 76  KIGDAYYAQEDYISAVASYEDFLKKHPGHTQTASVMYRLGKSHFAQLLSADRDQTATRNA 135

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
           L    ++++ Y +S   +    Y+    N+LAA E  IGR+YLK   Y AAI R + +  
Sbjct: 136 LATFEQLLKNYPDSIDPQELNSYIEQCHNRLAANEAYIGRFYLKTKRYTAAISRLENITN 195

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            Y +  +    +  L  A       D+A   +SL+Q+R
Sbjct: 196 TYPNYPNLTGVLFDLARAQKFDGKSDQALATLSLLQQR 233


>gi|313672442|ref|YP_004050553.1| outer membrane assembly lipoprotein yfio [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312939198|gb|ADR18390.1| outer membrane assembly lipoprotein YfiO [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 254

 Score =  169 bits (430), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 49/206 (23%), Positives = 97/206 (47%), Gaps = 6/206 (2%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFN--QCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              +   E  ++   + +++ + KA E         + P   +A ++ L+     +   +
Sbjct: 25  PPKKPAEEWLKEGTQYFQKKKYQKAAEALENAIIEAESP--ELAAQAQLLLGDSYFLMKE 82

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y+QA    +EY+  YP+S +     Y +G+SY   +  V  D    +L L+  +++ E+Y
Sbjct: 83  YEQAIPSYKEYLNIYPDSPDAKRAMYRLGLSYYNQVDTVDRDLENAELALKTFTQLKEKY 142

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
                       +   +N LA KE+ + ++Y +  E  +AI R + ++ N+ D +   E 
Sbjct: 143 PEFAKENKVDKKIVELKNLLAEKELYVAKFYFRIKEPSSAIKRLEYLVKNFKDTKSYPEG 202

Query: 230 MARLVEAYVALALMDEAREVVSLIQE 255
           +  L E+YV     D+A+EVV+L+ E
Sbjct: 203 LIMLAESYV--DKPDKAQEVVNLLTE 226



 Score = 43.6 bits (102), Expect = 0.034,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 8/78 (10%)

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA--------LA 241
           A  ++ +G  Y    EY  AIP ++  L  Y D+  A+ AM RL  +Y          L 
Sbjct: 67  AQAQLLLGDSYFLMKEYEQAIPSYKEYLNIYPDSPDAKRAMYRLGLSYYNQVDTVDRDLE 126

Query: 242 LMDEAREVVSLIQERYPQ 259
             + A +  + ++E+YP+
Sbjct: 127 NAELALKTFTQLKEKYPE 144


>gi|330901398|gb|EGH32817.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
           japonica str. M301072PT]
          Length = 166

 Score =  168 bits (427), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 67/153 (43%), Gaps = 14/153 (9%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
            SS++V  +++++V    E+Y++A   L   +++ A E        +PF   A ++ L  
Sbjct: 18  CSSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLEL 73

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPY 150
            +  Y  G+ + A S  E +I  +P+  NVDY YY+ G++                    
Sbjct: 74  IYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKR 133

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
           D  A +      +++  R+ NS Y   A+  + 
Sbjct: 134 DPGAARDSFNEFAQLTSRFPNSRYAPDAKQRMI 166


>gi|190571590|ref|YP_001975948.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of
           Culex quinquefasciatus Pel]
 gi|213018995|ref|ZP_03334802.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of
           Culex quinquefasciatus JHB]
 gi|190357862|emb|CAQ55321.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of
           Culex quinquefasciatus Pel]
 gi|212995104|gb|EEB55745.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of
           Culex quinquefasciatus JHB]
          Length = 228

 Score =  168 bits (427), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 69/237 (29%), Positives = 121/237 (51%), Gaps = 12/237 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +YK  +  FF +   F             L +      + E+YE+AV    ++ + +A  
Sbjct: 1   MYKTLIICFFLLTCPF-----------TQLYANDLEHTETELYEEAVKLYDQKKYKQAIR 49

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            F +    +P +  A K+ L+S    Y+ G Y  AAS  ++YI  YP  +++ YVYYL  
Sbjct: 50  AFQKIEDLYPLSYWAMKAKLLSGVSYYNMGNYSSAASDMDDYIYVYPNGEDLPYVYYLRV 109

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           +SY   I  V   Q+     L+  +  +  + NS Y++  +    +    ++ KE  IG 
Sbjct: 110 LSYYMQINKVQLGQQIAYKTLELATEYINLFPNSEYIEEIKEKEKLITEHISKKEYSIGE 169

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           +YLKRGEY+AAI RFQ +++N  D++++   ++ L+ A++AL L  EA +  +++ E
Sbjct: 170 FYLKRGEYLAAIKRFQDMISN-KDSKYSSRVISYLITAHLALGLDLEAEQYENMLVE 225


>gi|254797247|ref|YP_003082089.1| putative competence protein ComL [Neorickettsia risticii str.
           Illinois]
 gi|254590495|gb|ACT69857.1| putative competence protein ComL [Neorickettsia risticii str.
           Illinois]
          Length = 227

 Score =  168 bits (427), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 6/227 (2%)

Query: 17  YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
            +LY F    F     C L G     S+ V    V +   +  +Y  AVL L+++N+  A
Sbjct: 3   RKLYNFLFVCFL----CVLSGCGVGKSKKVLNSKVRED--ELSMYSSAVLSLEKKNYKAA 56

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            E F + +   PF+ +  K+      + Y  GK+  AA   E Y+  YP+ + VD V  +
Sbjct: 57  KELFEKVADIAPFSSIGEKAKASYTKILYDEGKFAAAAGSAEGYLLNYPDGEKVDQVLNI 116

Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
            G +Y QM +                + +++ +  S YV  A+  +      +A K   I
Sbjct: 117 KGNAYFQMSKGRTNSGEFADKARDAFTVLIQTFPASEYVTDAQKKLLEIDEIMAEKIFSI 176

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
           G +Y K   Y AAI RF  +L +YS  +  + A+++ +EAY  L + 
Sbjct: 177 GSFYFKEMNYHAAIARFDELLRDYSRTKLYDAALSKRLEAYKMLGVD 223



 Score = 39.7 bits (92), Expect = 0.43,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 31/76 (40%), Gaps = 8/76 (10%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL--------MDEAREVVSL 252
              G++ AA    +  L NY D E  ++ +     AY  ++          D+AR+  ++
Sbjct: 85  YDEGKFAAAAGSAEGYLLNYPDGEKVDQVLNIKGNAYFQMSKGRTNSGEFADKARDAFTV 144

Query: 253 IQERYPQGYWARYVET 268
           + + +P   +    + 
Sbjct: 145 LIQTFPASEYVTDAQK 160


>gi|85860041|ref|YP_462243.1| ComL family lipoprotein [Syntrophus aciditrophicus SB]
 gi|85723132|gb|ABC78075.1| lipoprotein, ComL family [Syntrophus aciditrophicus SB]
          Length = 239

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 41/196 (20%), Positives = 88/196 (44%), Gaps = 5/196 (2%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
               +Y +     +   + KA E F +   ++P + +A  + +      YS   Y +A +
Sbjct: 39  TPEGLYRRGYEDYQNGRYKKAIESFERLRDEYPMSELAILAKVGIGDAHYSNKAYAEAEA 98

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
              +++  +P ++N+ YV Y +GM + + +  +  DQ  T    +   +++ R+ +S + 
Sbjct: 99  AYNDFVYLHPTNENLPYVMYQIGMCHYKQMLSIDRDQTETVRAAKEFEKLLARFPDSKFS 158

Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
             A   +   R ++A  E  +G +Y K+ +Y AA+ RF+ +   Y++       +   V 
Sbjct: 159 LMAEKMLRECRVRIAEHEFYVGEFYFKQKKYQAALKRFETINREYANL-----GLDYKVS 213

Query: 236 AYVALALMDEAREVVS 251
           AY+       A+E   
Sbjct: 214 AYIRETQKRIAQEKAR 229


>gi|268316246|ref|YP_003289965.1| outer membrane assembly lipoprotein YfiO [Rhodothermus marinus DSM
           4252]
 gi|262333780|gb|ACY47577.1| outer membrane assembly lipoprotein YfiO [Rhodothermus marinus DSM
           4252]
          Length = 280

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 65/257 (25%), Positives = 98/257 (38%), Gaps = 23/257 (8%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
            L I   +A C   G  R SS              +E +E+A+ F  +  + +A EYF  
Sbjct: 13  LLVIGLLVAGCAGSGRLRHSS-------------PQEAFERAMEFYNQGKYDRAIEYFKA 59

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
                     A  +    A   Y   +Y  AAS  E +I  Y     V    Y   M Y 
Sbjct: 60  VFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYY 119

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
           ++      DQ  T+  ++     ++RY N   V  A   +   R +LA K+ E  R Y +
Sbjct: 120 KLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYER 179

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA-------LMDEAREVVSL--- 252
           R  Y AA   ++ V   Y D   A++A+   + AY+A A         +  R  V L   
Sbjct: 180 RELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYER 239

Query: 253 IQERYPQGYWARYVETL 269
           + + +P     R  E L
Sbjct: 240 LLQIFPDSPLLRTAEEL 256



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 52/165 (31%), Gaps = 24/165 (14%)

Query: 53  DVRYQREVYEKAV--------LFLKEQNFSKAYEYFNQCSRDFPFAGVARKS-------- 96
           D R  +  YE+A+          L + +  KA E F      +P   +   +        
Sbjct: 104 DPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELR 163

Query: 97  ------LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY--LVGMSYAQMIRDV 148
                    +A +      Y+ AA   E     YP++   D      +            
Sbjct: 164 AKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYAEQSVR 223

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
                  +  ++   R+++ + +SP ++ A    T  R +L   E
Sbjct: 224 ARQPERYRRAVELYERLLQIFPDSPLLRTAEELYTRARQRLTELE 268


>gi|206603307|gb|EDZ39787.1| Probable DNA uptake lipoprotein [Leptospirillum sp. Group II '5-way
           CG']
          Length = 243

 Score =  166 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 76/180 (42%)

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
                +LL  A   Y  G + +A    + ++  +P      +  Y +GM     I  V  
Sbjct: 50  AYGTSALLDEASRFYFKGDFIEARGEYKRFLELHPTHPLAAFAQYRMGMCDYYQILSVDR 109

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
           D    +  L    ++++ + +S YV  A+  + V R++L+     +G +Y K   + AA 
Sbjct: 110 DPTPVRKALADFQKVIDEFPDSSYVGKAQKKIAVCRDRLSRVHFYVGYFYYKTKRFKAAS 169

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
            RF  +L  Y D+   + A      +   L    +A  ++  + +++P+  +AR    L+
Sbjct: 170 YRFHTILLKYPDSRKYDRAEFYFALSKFHLKQRHQAVRLLKRLIQQFPKSKYARKSSILL 229


>gi|320355040|ref|YP_004196379.1| outer membrane assembly lipoprotein YfiO [Desulfobulbus propionicus
           DSM 2032]
 gi|320123542|gb|ADW19088.1| outer membrane assembly lipoprotein YfiO [Desulfobulbus propionicus
           DSM 2032]
          Length = 291

 Score =  166 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 78/171 (45%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           + +      ++ +A + F     + PF+  A  + L +A   Y   +Y +A +L + +  
Sbjct: 60  QGMDAYNVGDYGEAIKNFKIILDEHPFSAQAMLAELKAADANYYNKQYAEAKTLYKSFEE 119

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
           ++P ++ + YV + VGM   +    +  D    +  ++  +R++  Y  SPY K A+  +
Sbjct: 120 RHPTNEAIPYVMFQVGMCDYRRSDRIDRDASGPQEAIKSFTRLINAYPQSPYAKEAKAKI 179

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
              +  L   E  +  +Y++      A  R + +LA Y D+  A +A A L
Sbjct: 180 IECKEFLVNHEYMVAVFYVRTDRQEEAKHRLKYLLAMYPDSNLAPQAKALL 230


>gi|124516467|gb|EAY57975.1| probable DNA uptake lipoprotein [Leptospirillum rubarum]
          Length = 243

 Score =  166 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 37/180 (20%), Positives = 76/180 (42%)

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
                +LL  A   Y  G + +A    + ++  +P      +  Y +GM     I  V  
Sbjct: 50  AYGTSALLDEASRFYFKGDFIEARGEYKRFLELHPTHPLAAFAQYRMGMCDYYQILSVDR 109

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
           D    +  L    ++++ + +S YV  A+  + + R++L+     +G +Y K   + AA 
Sbjct: 110 DPTPVRKALSDFQKVIDEFPDSNYVGKAQKKIAICRDRLSRVHFYVGYFYYKTKRFKAAS 169

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
            RF  +L  Y D+   + A      +   L    +A  ++  + +++P+  +AR    L+
Sbjct: 170 YRFHTILLKYPDSRKYDRAEFYFALSKFHLKQRHQAVHLLKRLIQQFPKSKYARKSSILL 229


>gi|162451869|ref|YP_001614236.1| hypothetical protein sce3596 [Sorangium cellulosum 'So ce 56']
 gi|161162451|emb|CAN93756.1| hypothetical protein sce3596 [Sorangium cellulosum 'So ce 56']
          Length = 285

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 8/221 (3%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
           VG + + + D    ++T     R  Y +A+   + +++  A   F +  R FP++  AR 
Sbjct: 21  VGCDFELN-DGRTATLTYTEDARAAYNEAMAAFQAKDWEDARALFGEVKRLFPYSRYARL 79

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV------- 148
           + L  A + +  GKY +A S    +I ++   +NV+Y  Y +  +    I D        
Sbjct: 80  ADLRIADLDFEQGKYPEAISEYRAFIQEHRTDRNVEYAKYRMAKALYLDIDDTVFLPPAE 139

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
             DQ  T    + +   + +Y  S Y + A + + V   +L   E+ + RYYLK   + A
Sbjct: 140 ERDQATTLEAYKEIRTFLRQYPRSRYREDAAYMLEVVTGRLVRHELYVARYYLKEDAFDA 199

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           A+ R    L  +  +    EA+    E  + +   DEAR V
Sbjct: 200 ALARIDYALRTFPGSGLDPEALVLKGETLLKMKKPDEARAV 240


>gi|88608266|ref|YP_506787.1| putative competence protein ComL [Neorickettsia sennetsu str.
           Miyayama]
 gi|88600435|gb|ABD45903.1| putative competence protein ComL [Neorickettsia sennetsu str.
           Miyayama]
          Length = 219

 Score =  163 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 2/213 (0%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
           +C L G     S+ +  + V +   +  +Y  AVL L+++N+  A E F + +   PF+ 
Sbjct: 6   LCVLSGCGVGKSKKILNNKVRED--ELSMYNSAVLSLEKKNYKVAKELFEKVADIAPFSS 63

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
           +  K+      + Y  GK+  AA   E Y+  YP+ + +D V  + G +Y QM +     
Sbjct: 64  IGEKAKASYTKILYDEGKFAAAAGSAEGYLLDYPDGEKMDQVLNIKGNAYFQMSKGCTNS 123

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
                      + +++ +  S YV  A+  +      +A K   IG +Y K   Y AAI 
Sbjct: 124 SEFADKARDAFTVLIQTFPASEYVTDAQKKLLEIDEIMAEKIFSIGSFYFKEMSYHAAIA 183

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
           RF  ++ +YS  +  + A+++  EAY  L +  
Sbjct: 184 RFDELIRDYSRTKLYDAAVSKRAEAYKMLGIDP 216



 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 31/76 (40%), Gaps = 8/76 (10%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL--------MDEAREVVSL 252
              G++ AA    +  L +Y D E  ++ +     AY  ++          D+AR+  ++
Sbjct: 77  YDEGKFAAAAGSAEGYLLDYPDGEKMDQVLNIKGNAYFQMSKGCTNSSEFADKARDAFTV 136

Query: 253 IQERYPQGYWARYVET 268
           + + +P   +    + 
Sbjct: 137 LIQTFPASEYVTDAQK 152


>gi|302036223|ref|YP_003796545.1| hypothetical protein NIDE0853 [Candidatus Nitrospira defluvii]
 gi|300604287|emb|CBK40619.1| protein of unknown function, TPR-like [Candidatus Nitrospira
           defluvii]
          Length = 306

 Score =  162 bits (411), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 73/179 (40%)

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
                ++      +   ++ +A    + ++  +   +   Y    +  S+ +M + +  D
Sbjct: 55  YDPNVIMKRGEAFFDKEEFAEAIVEYQHFLELHRAHQLAVYAQLRLAESHLRMAKSIDRD 114

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
               +  +    ++ + +  S Y   A   +    + LA   + +G++Y +R  Y+AA  
Sbjct: 115 PEPIQKAIASFEKLRKEFPGSKYEAQALQRIADCHDWLAQTHLFVGQFYYRRASYLAAAH 174

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
           RF  ++ +Y D + A EA+  L   Y  L   D A E + L+ E+YP          L+
Sbjct: 175 RFDQIMKDYPDKKVAPEALYYLALTYQELGADDWAMEKLQLLAEKYPNSENTGDGRRLL 233



 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 43/126 (34%), Gaps = 22/126 (17%)

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFV--------------QYSAGKYQQAASLGEE 119
            KA   F +  ++FP +    ++L   A                 Y    Y  AA   ++
Sbjct: 119 QKAIASFEKLRKEFPGSKYEAQALQRIADCHDWLAQTHLFVGQFYYRRASYLAAAHRFDQ 178

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+ K      Y + ++Y ++  D           ++ +  + E+Y NS      R
Sbjct: 179 IMKDYPDKKVAPEALYYLALTYQELGADDW--------AMEKLQLLAEKYPNSENTGDGR 230

Query: 180 FYVTVG 185
             +   
Sbjct: 231 RLLAKL 236


>gi|261416538|ref|YP_003250221.1| outer membrane assembly lipoprotein YfiO [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|261372994|gb|ACX75739.1| outer membrane assembly lipoprotein YfiO [Fibrobacter succinogenes
           subsp. succinogenes S85]
          Length = 293

 Score =  162 bits (410), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 101/239 (42%), Gaps = 5/239 (2%)

Query: 13  EAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN 72
                 L+K  L + F + +  ++G    S++       T   + +  YE A    K + 
Sbjct: 8   RKKMKNLFKCTLFVPFFLYMATVMGCSTASTKKT-----THTEWCKARYEAAEELFKAKK 62

Query: 73  FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
           + +A E   +       +G   ++  + A   ++  ++ +A      +I  +P S   + 
Sbjct: 63  YGRATERLEEILSTCAGSGYMEQAQFLLAESHFNLEQWIEARGEYGSFIVNFPGSPFAET 122

Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
             +   +S   M   +  D+  T   ++   R +  + N+P      +Y  +  +++A K
Sbjct: 123 AEFRKAVSSFNMDYRIDRDESNTTTAMKDFERYLANHPNTPLRDSVNYYYNLLVDRVAEK 182

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
           E + GR YL+  +  AA+  F+  L  Y  A+  +EA+  + +AY  L   + AR+ ++
Sbjct: 183 EFQTGRLYLRMEKPQAAVIYFKEFLETYPKAQRRQEALFLISDAYTDLDQFESARQYLA 241



 Score = 37.0 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 30/78 (38%), Gaps = 2/78 (2%)

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           A  E        K  +Y  A  R + +L+  + + + E+A   L E++  L    EAR  
Sbjct: 49  ARYE--AAEELFKAKKYGRATERLEEILSTCAGSGYMEQAQFLLAESHFNLEQWIEARGE 106

Query: 250 VSLIQERYPQGYWARYVE 267
                  +P   +A   E
Sbjct: 107 YGSFIVNFPGSPFAETAE 124


>gi|251771637|gb|EES52212.1| DNA uptake lipoprotein-like protein [Leptospirillum
           ferrodiazotrophum]
          Length = 234

 Score =  161 bits (409), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 43/175 (24%), Positives = 76/175 (43%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +LL  A   Y  G + +A    + ++  +P      +  Y +GM     I  +  D   T
Sbjct: 50  ALLDEASRFYFKGDFIEARGEYKRFLELHPTHPLAAFAQYRIGMCDFYQIGGIDRDPSPT 109

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           +  L    ++++ Y +SPYV+ A+  V   R + A     +G +Y +   Y AA  RF  
Sbjct: 110 EKALADFQKVIDEYPDSPYVEKAQKKVAFCRERKARLHFYVGSFYYRTKFYKAAAYRFHS 169

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
           +L  Y D++    A     +A       ++A EV+  I  + P   +AR  + L+
Sbjct: 170 ILLKYPDSKIYPRAQYNYAKALFHEKKREKAAEVMRTIVAQSPGSTYARKAQILL 224



 Score = 41.3 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 46/129 (35%), Gaps = 22/129 (17%)

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFV--------------QYSAGKYQQAASLGEE 119
            KA   F +   ++P +    K+    AF                Y    Y+ AA     
Sbjct: 110 EKALADFQKVIDEYPDSPYVEKAQKKVAFCRERKARLHFYVGSFYYRTKFYKAAAYRFHS 169

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            + +YP+SK      Y    +YA+ +      ++  +   + M  IV +   S Y + A+
Sbjct: 170 ILLKYPDSKIYPRAQY----NYAKALFH----EKKREKAAEVMRTIVAQSPGSTYARKAQ 221

Query: 180 FYVTVGRNQ 188
             +   + +
Sbjct: 222 ILLDYWKRR 230



 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 20/57 (35%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
           + L       Y R  Y  A     E+   KA E         P +  ARK+ ++  +
Sbjct: 170 ILLKYPDSKIYPRAQYNYAKALFHEKKREKAAEVMRTIVAQSPGSTYARKAQILLDY 226


>gi|71891967|ref|YP_277697.1| putative lipoprotein [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
 gi|71796073|gb|AAZ40824.1| putative lipoprotein [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
          Length = 247

 Score =  160 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 41/209 (19%), Positives = 87/209 (41%), Gaps = 12/209 (5%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y+ A   L   ++ +A +        +      ++  L   +  Y     + A +  E 
Sbjct: 36  LYKSAQNKLYNADYKEATQDLINLLNLYLLDPCPQQIYLDLIYAYYKLNDLKSANNYIEH 95

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRD------------VPYDQRATKLMLQYMSRIVE 167
           +   YP  K+ DYV Y+ G+    +  D               +     +      R++ 
Sbjct: 96  FFKLYPNHKHFDYVLYMHGVINMCLDEDNKKLIKYLNINWFDRNPMYACIAFHTFVRLIR 155

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
           +Y +S Y   A   +   +N++A  E+ I ++Y K+  Y++ I R + +L ++ D +   
Sbjct: 156 QYPDSQYSLDAYKRLIFLKNRVAEYELSIVKFYSKKHAYISVIARVEKMLYHFPDTQATR 215

Query: 228 EAMARLVEAYVALALMDEAREVVSLIQER 256
           +A+  + +AY  + L D+A +V  +I   
Sbjct: 216 KALYYMQQAYQNIYLPDQANKVAKIIAAN 244


>gi|329666231|pdb|3QKY|A Chain A, Crystal Structure Of Rhodothermus Marinus Bamd
          Length = 261

 Score =  158 bits (401), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 57/225 (25%), Positives = 89/225 (39%), Gaps = 10/225 (4%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
              +E +E+A+ F  +  + +A EYF            A  +    A   Y   +Y  AA
Sbjct: 13  SSPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAA 72

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
           S  E +I  Y     V    Y   M Y ++      DQ  T+  ++     ++RY N   
Sbjct: 73  SEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHEL 132

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
           V  A   +   R +LA K+ E  R Y +R  Y AA   ++ V   Y D   A++A+   +
Sbjct: 133 VDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAM 192

Query: 235 EAYVALA-------LMDEAREVVSL---IQERYPQGYWARYVETL 269
            AY+A A         +  R  V L   + + +P     R  E L
Sbjct: 193 RAYIAYAEQSVRARQPERYRRAVELYERLLQIFPDSPLLRTAEEL 237



 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 52/165 (31%), Gaps = 24/165 (14%)

Query: 53  DVRYQREVYEKAV--------LFLKEQNFSKAYEYFNQCSRDFPFAGVARKS-------- 96
           D R  +  YE+A+          L + +  KA E F      +P   +   +        
Sbjct: 85  DPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELR 144

Query: 97  ------LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY--LVGMSYAQMIRDV 148
                    +A +      Y+ AA   E     YP++   D      +            
Sbjct: 145 AKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYAEQSVR 204

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
                  +  ++   R+++ + +SP ++ A    T  R +L   E
Sbjct: 205 ARQPERYRRAVELYERLLQIFPDSPLLRTAEELYTRARQRLTELE 249


>gi|256257867|ref|ZP_05463403.1| COML, competence lipoprotein [Brucella abortus bv. 9 str. C68]
 gi|260884157|ref|ZP_05895771.1| competence protein ComL [Brucella abortus bv. 9 str. C68]
 gi|260873685|gb|EEX80754.1| competence protein ComL [Brucella abortus bv. 9 str. C68]
          Length = 162

 Score =  158 bits (401), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 45/154 (29%), Positives = 75/154 (48%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K AL       +  L G   ++        V  +    ++Y + +  L      +A +
Sbjct: 9   VTKTALLSGTIAVLIPLAGCASKNDDIDLTKYVETIDPADKLYNEGLANLDAGRLDEAAK 68

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            F    R  P+   ARK+L+M+AF  Y  G Y++A S+ + Y T YP S    Y YY++G
Sbjct: 69  KFAAIDRQHPYTEWARKALVMAAFTNYRKGNYEEAISMAKRYNTLYPTSPESAYAYYIIG 128

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           +SY + I DV  DQ A++  +  M  +++R+ NS
Sbjct: 129 LSYFRQIPDVTRDQAASRRAIAAMQEVIDRFPNS 162


>gi|15617006|ref|NP_240219.1| hypothetical protein BU402 [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219681758|ref|YP_002468144.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|219682313|ref|YP_002468697.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|257471460|ref|ZP_05635459.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|18202269|sp|P57482|Y402_BUCAI RecName: Full=UPF0169 protein BU402
 gi|25403614|pir||A84977 hypothetical protein [imported] - Buchnera sp. (strain APS)
 gi|10039071|dbj|BAB13105.1| hypothetical protein [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
 gi|219622046|gb|ACL30202.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219624601|gb|ACL30756.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|311086139|gb|ADP66221.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086712|gb|ADP66793.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311087297|gb|ADP67377.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
 gi|311087808|gb|ADP67887.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 246

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 49/208 (23%), Positives = 94/208 (45%), Gaps = 11/208 (5%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA-RKSLLMSAFVQYSAGKYQQAASLGE 118
           +YEK+   L+++NF  A     +  ++   A ++  K  +   +  Y    + QA    E
Sbjct: 36  LYEKSNKELRKENFDNAISILEKIKKNNNTANISNDKIQIDLIYAYYKILNFDQARKNIE 95

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168
           E++  YP   N+DYV Y+  +    +          I     D    K     +   + +
Sbjct: 96  EFMYFYPNHPNIDYVVYIQCLISMSLDKNRFFSVFPINYYKNDYFYAKNAFFQLKYFIYQ 155

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y  S YV  A+  +   +N+L+  ++ I ++Y    EY+A I R + +L  YS+   A +
Sbjct: 156 YPKSRYVVNAKKNLIYIKNRLSEHDLSILKFYFFHKEYIAVINRGEEMLQRYSETPSARK 215

Query: 229 AMARLVEAYVALALMDEAREVVSLIQER 256
           A+  + ++Y AL + D A+++  +I   
Sbjct: 216 ALIYIEKSYYALKIFDTAKKISKIILLN 243


>gi|213420844|ref|ZP_03353910.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
          Length = 137

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 50/130 (38%), Gaps = 7/130 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +    FL G     S++   D+        E+Y  A   L++ N+ +A  
Sbjct: 1   MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWKQAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y       A +  + ++   P   N+DYV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVMYMRG 113

Query: 139 MSYAQMIRDV 148
           ++   +   V
Sbjct: 114 LTNMALDDSV 123


>gi|21672663|ref|NP_660730.1| hypothetical protein BUsg389 [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|25009590|sp|Q8K9E8|Y389_BUCAP RecName: Full=UPF0169 protein BUsg_389
 gi|21623300|gb|AAM67941.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 243

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 44/207 (21%), Positives = 92/207 (44%), Gaps = 10/207 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y+K    LKE+NF KA     +   +        K  +   +  Y    +  A    EE
Sbjct: 35  LYQKCRKELKEKNFYKAIFDLKKIENNHAINFNNDKIKMNLIYAYYKVSDFNTAEKNIEE 94

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVERY 169
           +I +YP+  N+DY++Y+  +    + + + ++                    + + V  Y
Sbjct: 95  FIKKYPKHLNIDYIFYIQSLINISLDKKIFHNVFPIQIYKSNPIYAIKAFFQLKKFVYNY 154

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
            NS YV  A+  +   + +L+  ++ I +YY    +Y+A I R + +L  Y +   A + 
Sbjct: 155 PNSIYVINAKKDLFYLKKRLSEHDLTILKYYFYHKKYIAVINRGEEILQKYPETSAAIDT 214

Query: 230 MARLVEAYVALALMDEAREVVSLIQER 256
           +  + ++++AL + D A+++  +I   
Sbjct: 215 LKYMEKSFLALKIFDTAKKISKIILLN 241


>gi|213619386|ref|ZP_03373212.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-2068]
          Length = 132

 Score =  148 bits (374), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 49/130 (37%), Gaps = 7/130 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +    FL       S++   D+        E+Y  A   L++ N+ +A  
Sbjct: 1   MTRMKYLVAAATLSLFLASCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWKQAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +PF   +++  L   +  Y       A +  + ++   P   N+DYV Y+ G
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVMYMRG 113

Query: 139 MSYAQMIRDV 148
           ++   +   V
Sbjct: 114 LTNMALDDSV 123


>gi|325294284|ref|YP_004280798.1| outer membrane assembly lipoprotein YfiO [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325064732|gb|ADY72739.1| outer membrane assembly lipoprotein YfiO [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 316

 Score =  147 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 52/232 (22%), Positives = 103/232 (44%), Gaps = 16/232 (6%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ-CS 84
           I F + + FL   E+              R    +Y++ +   KE ++ K+ E   +   
Sbjct: 5   IIFFVCLLFLFSCEKIP------------RTAEGLYQEGMKAAKEGDWGKSTEMLEKALE 52

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
            + P +     + +  A   ++   ++ AA   EE++  YP S       + +G+SY  +
Sbjct: 53  GELPPSK-QELAKITLANSYFNDQDFENAALNYEEFLDLYPASPRAKDALFRLGISYLNL 111

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
           ++   +DQ  TK  ++   + V+ + N P V+ A+ Y  + R  LA  EV IG  Y    
Sbjct: 112 VKGPQWDQTFTKKAIRAFEKFVKEFPNDPRVEKAKIYKNIARKILAENEVYIGGTYDMLH 171

Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           ++ A+I R+++V   Y D E  +     +  AY    +  +A+E +  ++ +
Sbjct: 172 KFTASINRYKIVKEKYRDVESLDRIDYLIGRAYFFTDI--QAKEEIDRLKRQ 221


>gi|46202602|ref|ZP_00052938.2| COG4105: DNA uptake lipoprotein [Magnetospirillum magnetotacticum
           MS-1]
          Length = 164

 Score =  147 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 37/111 (33%), Positives = 61/111 (54%)

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
           ++ +  +V+R+ +S Y + AR  + + R+ LA KE+ IGRYY   G ++AA+ RF++V  
Sbjct: 1   MKILHEVVDRFPSSVYARDARLKIDLARDHLAGKEMNIGRYYQNLGHHLAALNRFKMVAE 60

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
            Y    H  EA+ R+VE Y AL L  EA    +++   +P   W      +
Sbjct: 61  QYQTTTHVPEALYRMVELYTALGLDQEAARAAAVLGHNFPGSDWYEDAYAM 111



 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 16/120 (13%), Positives = 36/120 (30%), Gaps = 26/120 (21%)

Query: 78  EYFNQCSRDFPFAGVARKSLL-------------MSAFVQYSAGKYQQAASLGEEY---I 121
           +  ++    FP +  AR + L             M+    Y         +    +    
Sbjct: 2   KILHEVVDRFPSSVYARDARLKIDLARDHLAGKEMNIGRYYQN--LGHHLAALNRFKMVA 59

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
            QY  + +V    Y +     ++   +  DQ A +      + +   +  S + + A   
Sbjct: 60  EQYQTTTHVPEALYRM----VELYTALGLDQEAARAA----AVLGHNFPGSDWYEDAYAM 111


>gi|91202470|emb|CAJ72109.1| hypothetical protein kustd1364 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 308

 Score =  144 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 45/196 (22%), Positives = 82/196 (41%), Gaps = 9/196 (4%)

Query: 45  DVYLDSVTDVRYQREVYEK------AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
           D  L      +  +EV+EK      A + + E   + A   F +   + P   +A +S +
Sbjct: 107 DTVLREYPGTKRTKEVHEKVFQVGIAQMEMDE---NAAIRVFEKIIENHPMGPIAPESQI 163

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
             A   +  G Y+ A    ++++  YP ++ + YV Y + +S     +    +       
Sbjct: 164 KIADCYFKLGYYEDAVDAYKKFMESYPRNEWIPYVQYQIPLSKFYFEKQQERNYGLLVSA 223

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
            +     +    +  YV+ A   +   R   A +E EIG +YL+R    +A   F+ V+ 
Sbjct: 224 REGFEEYLVTNPHGVYVEDASRMIEEIRVIEARREFEIGEFYLRRKTPSSASIYFKYVIK 283

Query: 219 NYSDAEHAEEAMARLV 234
           ++ D   AE AM RL 
Sbjct: 284 DFPDTIWAERAMERLE 299



 Score = 92.1 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 72/209 (34%), Gaps = 26/209 (12%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
             L + F I+      W              DV    + Y+ A+  L EQ +  A + F 
Sbjct: 11  IVLAVTFLISTASYGKWVWNKDTGWMQPPTGDVGSPEQRYKNALFMLVEQKYVSAIKEFK 70

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY---YLVG 138
                +P +  A  S +   +  Y  G Y +A    +  + +YP +K    V+   + VG
Sbjct: 71  LIIDGYPDSAYAELSQINIGWAYYLNGDYNRALKAYDTVLREYPGTKRTKEVHEKVFQVG 130

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           ++  +M  +           ++   +I+E +   P    ++  +                
Sbjct: 131 IAQMEMDEN---------AAIRVFEKIIENHPMGPIAPESQIKIADC------------- 168

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y K G Y  A+  ++  + +Y   E   
Sbjct: 169 -YFKLGYYEDAVDAYKKFMESYPRNEWIP 196


>gi|325955604|ref|YP_004239264.1| outer membrane assembly lipoprotein YfiO [Weeksella virosa DSM
           16922]
 gi|323438222|gb|ADX68686.1| outer membrane assembly lipoprotein YfiO [Weeksella virosa DSM
           16922]
          Length = 296

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 58/255 (22%), Positives = 99/255 (38%), Gaps = 12/255 (4%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           +F  +++ FLV     S    Y  ++     + E++  A    ++  +  A E +N+ S 
Sbjct: 1   MFKKVSLTFLVATMLTSCNTQYNKAM-KSSDKDEIFSIANTLFEQGKYDLALELYNRIST 59

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
            F     A       A   Y+   Y+ +  L + +   YP     +   YL   SY +  
Sbjct: 60  SFVGTEKAADIAYNIAQANYNDENYRLSGHLFKNFAGTYPLDHRAEDALYLSAFSYYKDS 119

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
                DQ +T   +  M   +  Y  S +V  A  Y+   R +L  K  EI R Y K  +
Sbjct: 120 PRYNLDQTSTYNAIDEMQNFINTYPESEHVAQANEYIDELRGKLEKKAFEIARVYYKTMK 179

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM-----------DEAREVVSLIQ 254
           Y AA   F  ++ ++ D+++ EEAM   + +   LA+             EA     L  
Sbjct: 180 YKAAGVAFDNMVDDFPDSKYREEAMLYSLRSKAELAMNFSRLEHKELRLQEALTQYKLFS 239

Query: 255 ERYPQGYWARYVETL 269
             YP+  +    E +
Sbjct: 240 RLYPESSFKSEAEKI 254


>gi|289806131|ref|ZP_06536760.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 138

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 10/138 (7%)

Query: 133 VYYLVGMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
           V Y+ G++   +   V            D +  +      S++V  Y NS Y   A   +
Sbjct: 1   VMYMRGLTNMALDDSVLQGFFGVDRSDRDPQHARAAFNDFSKLVRSYPNSQYTTDATKRL 60

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
              +++LA  E  +  YY  RG +VA + R + +L NY D +   +A+  +  AY  + L
Sbjct: 61  VFLKDRLAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATRDALPLMENAYRQMQL 120

Query: 243 MDEAREVVSLIQERYPQG 260
             +A +V  +I       
Sbjct: 121 NAQADKVAKIIAANSKNT 138


>gi|291288282|ref|YP_003505098.1| outer membrane assembly lipoprotein YfiO [Denitrovibrio acetiphilus
           DSM 12809]
 gi|290885442|gb|ADD69142.1| outer membrane assembly lipoprotein YfiO [Denitrovibrio acetiphilus
           DSM 12809]
          Length = 259

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 93/239 (38%), Gaps = 10/239 (4%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            +   I V    G  +++          +     E  +  + + K+ N+ KA  YF    
Sbjct: 5   VLLIMICVLTFAGCAKKA---------PNQMTAEESMKTGMTYFKKGNYEKAVTYFENTL 55

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
            +     +A K+ L  A   +   KY +A    E ++  Y E+++ +     +G+S+   
Sbjct: 56  MEAETPEMAAKAQLFLADSYFLDKKYVEAIPAYELFLEIYGETEDANTAMLRLGLSHYAQ 115

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
           I  +  D  A +  L   +++ ++             +   R+ LA +E+ + ++Y +  
Sbjct: 116 IDTIDRDMSAAEGALNAFTKLRDKSPAFAREFELNKKIVELRSMLAERELYVAKFYFRIK 175

Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVE-AYVALALMDEAREVVSLIQERYPQGYW 262
           E  +A  R + +++NYSD    +EA+               EA +    + +  P   +
Sbjct: 176 EPDSAEGRLKYLISNYSDTASYDEALYMYANWLADKKGREAEAVKYYRKLIDERPNSKY 234


>gi|320105768|ref|YP_004181358.1| outer membrane assembly lipoprotein YfiO [Terriglobus saanensis
           SP1PR4]
 gi|319924289|gb|ADV81364.1| outer membrane assembly lipoprotein YfiO [Terriglobus saanensis
           SP1PR4]
          Length = 596

 Score =  142 bits (359), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 45/215 (20%), Positives = 91/215 (42%), Gaps = 10/215 (4%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
           S+D  L  +   +  +++Y+KA+   K   +  A          +P +    ++ L  A 
Sbjct: 109 SKDNPLAGLDSTQPDKQLYDKALASTKRGRYDVARLELQTLLATYPDSEYMMRAKLAFAD 168

Query: 103 VQYSAG---KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
             Y  G      QA +  +++IT +P +         VG  Y + +     D        
Sbjct: 169 SWYREGGTAALAQAETEYKDFITFFPNAPEAAEAQMRVGDIYFKQMDTPDRDYTKAVHAQ 228

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
           +    +++++ +S  + GA+  +   +  LA +E  I  +Y  R  + A+I R+Q V+  
Sbjct: 229 EEYRTMLQQFPDSTLIPGAKQRLREVQEVLATRETNIAAFYAGRENWPASIARYQTVVDT 288

Query: 220 YSDAEHAEEAMARLVEAYVA-------LALMDEAR 247
           Y    H++EA+  L +A+ A       + L + A+
Sbjct: 289 YPIFSHSDEALIGLGDAFAAEARMVRVMKLPEGAK 323


>gi|262197816|ref|YP_003269025.1| outer membrane assembly lipoprotein YfiO [Haliangium ochraceum DSM
           14365]
 gi|262081163|gb|ACY17132.1| outer membrane assembly lipoprotein YfiO [Haliangium ochraceum DSM
           14365]
          Length = 261

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 49/228 (21%), Positives = 102/228 (44%), Gaps = 10/228 (4%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
                   +       ++ Y K +L L+E+++  A +YF    + FP++  A  + L  A
Sbjct: 18  GCSKAPPGTAVYATTAQQNYSKGMLELEEKDWIAAVKYFAFVKQRFPYSKYAVLAELRMA 77

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNV--DYVYYLVGMSYAQMIRD--------VPYD 151
             ++ A  Y QA    + +I  +P  + V   Y  + VG +Y +++ D           D
Sbjct: 78  DAEFGAEHYLQAVDAFKLFIKFHPTHEQVVDGYAAFRVGAAYYELLPDDMWILPPSYEKD 137

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
             +T    + ++  +++Y +S Y + A+  +      LAA E  + ++Y  R + +  + 
Sbjct: 138 PSSTYDAERELATFLKKYPDSAYHEEAKEMLAAVHAHLAAHEWYVAKFYWDREKPMGTVL 197

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           R + +L  Y+      +A+  L  AY+ + + + ARE    + E++P 
Sbjct: 198 RLRRLLDRYAGTRFDGDALWLLGSAYMKVDMPERAREAWQTLIEQHPD 245


>gi|225874148|ref|YP_002755607.1| tetratricopeptide repeat protein [Acidobacterium capsulatum ATCC
           51196]
 gi|225791664|gb|ACO31754.1| tetratricopeptide repeat protein [Acidobacterium capsulatum ATCC
           51196]
          Length = 549

 Score =  137 bits (346), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 79/202 (39%), Gaps = 8/202 (3%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG---KY 110
            +   E++ KA+  +++  +  A          +P +  A ++ L  A   +  G     
Sbjct: 50  KQPDAELFNKAMKSMRKGRYDVARLELETLLNTYPDSEYAMRAKLAVADSWFKEGGTAAL 109

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           +QA +  +++IT +P +         VG  Y   +     D        Q    ++E++ 
Sbjct: 110 EQAEAEYKDFITFFPNTPEAAEAQMKVGDIYYMQMERPDRDPTNAVAAEQQYRTMIEQFP 169

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
           +S  +  A+  +   +  LA  + E+G YY    ++  AI R + V   Y      +  +
Sbjct: 170 DSTLIPEAKQKLRNVQEVLAQAQFEVGTYYSTTEDWPGAIARLETVADLYPLYSKVDADL 229

Query: 231 ARLVEAYVALALMDEAREVVSL 252
             + + Y      +EA+ V  +
Sbjct: 230 LLMGDDY-----ANEAQAVSRM 246



 Score = 35.5 bits (81), Expect = 8.6,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 33/103 (32%), Gaps = 13/103 (12%)

Query: 95  KSLLMSAFVQYSA-GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
           ++        YS    +  A +  E     YP    VD    L+G  YA   + V   + 
Sbjct: 190 QAQFEVG-TYYSTTEDWPGAIARLETVADLYPLYSKVDADLLLMGDDYANEAQAVSRMRM 248

Query: 154 ATKL-----------MLQYMSRIVERYTNSPYVKGARFYVTVG 185
             K                 S IVE+Y  SP  + A+  +   
Sbjct: 249 PAKAKTELLNYYNGRAADAWSAIVEKYPMSPNAENAKDRLIAM 291


>gi|228472533|ref|ZP_04057293.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga gingivalis
           ATCC 33624]
 gi|228275946|gb|EEK14702.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga gingivalis
           ATCC 33624]
          Length = 264

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 51/221 (23%), Positives = 84/221 (38%), Gaps = 10/221 (4%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A     + +++++   + +    +        +L M A   Y   KY  A    E +
Sbjct: 35  YKVAKALYDKGDYNRSMRLWEKVVGYYIGRPQGEDALYMYADSFYKRKKYLLAGYQYERF 94

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +  YP S+  + V +L G            DQ AT   L  +   ++RY N  Y++ A  
Sbjct: 95  LKNYPRSEKAEEVLFLQGKCNFLESPKYSLDQDATYKALDQLQEYIDRYPNGAYLREANN 154

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
            V    N+L  K  EI + Y K  +Y AAI  F   L     +   EEAM   + +   L
Sbjct: 155 MVLELLNKLQHKSFEIAKGYDKIRDYQAAIKSFDNFLVENPGSTFREEAMYYRLHSAYEL 214

Query: 241 ALM----------DEAREVVSLIQERYPQGYWARYVETLVK 271
           A            +EA+    L    YP+  +      + +
Sbjct: 215 AKNSIKSKEKQRFEEAKSYYELFSRTYPESNFMTKANRMYQ 255



 Score = 42.4 bits (99), Expect = 0.075,   Method: Composition-based stats.
 Identities = 17/143 (11%), Positives = 41/143 (28%), Gaps = 16/143 (11%)

Query: 65  VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKY 110
              L +    KA +   +    +P     R++                  A        Y
Sbjct: 121 KYSLDQDATYKALDQLQEYIDRYPNGAYLREANNMVLELLNKLQHKSFEIAKGYDKIRDY 180

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV--PYDQRATKLMLQYMSRIVER 168
           Q A    + ++ + P S   +   Y    S  ++ ++     +++  +    Y       
Sbjct: 181 QAAIKSFDNFLVENPGSTFREEAMYYRLHSAYELAKNSIKSKEKQRFEEAKSYYELFSRT 240

Query: 169 YTNSPYVKGARFYVTVGRNQLAA 191
           Y  S ++  A         +++ 
Sbjct: 241 YPESNFMTKANRMYQDILKKISE 263


>gi|256257866|ref|ZP_05463402.1| COML, competence lipoprotein [Brucella abortus bv. 9 str. C68]
 gi|260884156|ref|ZP_05895770.1| competence protein ComL [Brucella abortus bv. 9 str. C68]
 gi|260873684|gb|EEX80753.1| competence protein ComL [Brucella abortus bv. 9 str. C68]
          Length = 125

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 45/99 (45%), Positives = 64/99 (64%)

Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
            Y   A+  + V R+QLA KE++IGRYYL+R EY+AAI RF+ V+  YS+    EEA+AR
Sbjct: 1   EYTDDAKTKIRVARDQLAGKEMQIGRYYLERKEYLAAIKRFRGVVEEYSNTRQVEEALAR 60

Query: 233 LVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           LVEAY AL L  EA+   S++ + +P   W +    L++
Sbjct: 61  LVEAYYALGLTSEAQMAASVLGKNFPDSQWYKDSYKLLQ 99


>gi|326334355|ref|ZP_08200568.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga sp. oral
           taxon 338 str. F0234]
 gi|325693439|gb|EGD35365.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga sp. oral
           taxon 338 str. F0234]
          Length = 266

 Score =  136 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 53/264 (20%), Positives = 93/264 (35%), Gaps = 18/264 (6%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
            +    + I   I++ F    E Q +       +         Y+ A    ++ +++++ 
Sbjct: 2   NMKGKVIAIMLIISLAFSACGEYQKALKTEDYELK--------YKVAKSLYEKGDYARSM 53

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
               +    +       ++L M A   Y   KY  AA   E +   YP S+  + V +L 
Sbjct: 54  RLLEKVVGFYIGRPQGEEALYMYADSYYKRKKYLLAAYQYERFTKNYPRSEKAEQVLFLQ 113

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
           G  Y         DQ  T   L  +   ++RY NS  ++ A   V     +L  K  EI 
Sbjct: 114 GKCYFLESPKYSLDQEGTYKALDALQEYIDRYPNSENLREANNMVLELLTKLQRKSFEIA 173

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM----------DEAR 247
           + Y K  +Y AAI  F   L     +   EEA+     +   LA            +EA+
Sbjct: 174 KGYDKIRDYQAAIKSFDNFLIENPGSVFREEALYYRFHSAYELAKNSVKSKEKQRFEEAK 233

Query: 248 EVVSLIQERYPQGYWARYVETLVK 271
                    +P   +    + + +
Sbjct: 234 NQYENFVRIFPDSDFKGRADKMYQ 257



 Score = 39.7 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 24/196 (12%), Positives = 57/196 (29%), Gaps = 61/196 (31%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-KYQQ--- 112
           +  +Y  A  + K + +  A   + + ++++P +  A + L +     +    KY     
Sbjct: 70  EEALYMYADSYYKRKKYLLAAYQYERFTKNYPRSEKAEQVLFLQGKCYFLESPKYSLDQE 129

Query: 113 ----AASLGEEYITQYPESKNV-----------------------------DY------- 132
               A    +EYI +YP S+N+                             DY       
Sbjct: 130 GTYKALDALQEYIDRYPNSENLREANNMVLELLTKLQRKSFEIAKGYDKIRDYQAAIKSF 189

Query: 133 ---------------VYYLVGMSYAQMIRDV--PYDQRATKLMLQYMSRIVERYTNSPYV 175
                            Y    S  ++ ++     +++  +         V  + +S + 
Sbjct: 190 DNFLIENPGSVFREEALYYRFHSAYELAKNSVKSKEKQRFEEAKNQYENFVRIFPDSDFK 249

Query: 176 KGARFYVTVGRNQLAA 191
             A         +++ 
Sbjct: 250 GRADKMYQDILKKISE 265


>gi|305667245|ref|YP_003863532.1| putative lipoprotein [Maribacter sp. HTCC2170]
 gi|88708179|gb|EAR00417.1| conserved hypothetical lipoprotein [Maribacter sp. HTCC2170]
          Length = 282

 Score =  135 bits (341), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 48/269 (17%), Positives = 101/269 (37%), Gaps = 25/269 (9%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           ++ K    +  ++ +     +++    +               Y+ A  + +E+++ +A 
Sbjct: 4   KMRKLLSFLAIAVVLSSCNEYQKALKNEDVKAK----------YDLAQKYYEEEDYKRAN 53

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
             F Q +  +       + +   A   +    Y  A    E +I  YP+S+ V    +L 
Sbjct: 54  RLFEQIAPKYVGKPQGERVMFFFANTYFETKDYNTAGYQFERFIKSYPKSEKVPQASFLG 113

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             SY Q+      DQ  T   L  +   +  + +S Y   A         +   K  EIG
Sbjct: 114 AKSYFQLSPLHSLDQTDTDKALIKLQSFINTFPDSEYFDEANKMAKELTTKKERKAFEIG 173

Query: 198 RYYLKRGEY-----VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM--------- 243
           + + K G +       A+  F   +++Y  + + EEA+    EA     +          
Sbjct: 174 KQFNKLGRFDYSFLTPAMAAFDNFISDYPGSIYREEALYLKFEAATEFGMNSFSRLKPER 233

Query: 244 -DEAREVVSLIQERYPQGYWARYVETLVK 271
            +EA+   S+++++YP+  +      L+K
Sbjct: 234 LEEAKTAYSVLKKQYPETKFEDDAAKLLK 262



 Score = 42.0 bits (98), Expect = 0.087,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 27/82 (32%), Gaps = 2/82 (2%)

Query: 113 AASLGEEYITQYPESKNVDYVYYLV--GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           A +  + +I+ YP S   +   YL     +   M           +      S + ++Y 
Sbjct: 190 AMAAFDNFISDYPGSIYREEALYLKFEAATEFGMNSFSRLKPERLEEAKTAYSVLKKQYP 249

Query: 171 NSPYVKGARFYVTVGRNQLAAK 192
            + +   A   +     +L  K
Sbjct: 250 ETKFEDDAAKLLKKIDKELGNK 271


>gi|319789104|ref|YP_004150737.1| outer membrane assembly lipoprotein YfiO [Thermovibrio ammonificans
           HB-1]
 gi|317113606|gb|ADU96096.1| outer membrane assembly lipoprotein YfiO [Thermovibrio ammonificans
           HB-1]
          Length = 316

 Score =  135 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 45/202 (22%), Positives = 85/202 (42%), Gaps = 4/202 (1%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
           R     Y + +    ++++ +      +    + P       + +  A   ++ G Y+ A
Sbjct: 22  RTAEGQYREGIKAAAQEDWGRTIFLLKKALQGNLP-PKEQEFAKIALADAYFNEGDYENA 80

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
           A   EE++  YP S       + +G+ Y  +++   +D    K       R ++ Y N P
Sbjct: 81  ALNYEEFLQLYPASPRAKDALFRLGVCYLNLVKGPQWDVTFAKRAYNIFQRFIKEYPNDP 140

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
            VK A+ Y  + R  LA  E+ IG  Y    ++ A+I R+  V   + D E  +  +  L
Sbjct: 141 RVKKAKLYAELARKILAEHEIYIGGTYDMLRKFTASIQRYTDVERKFKDVEAPDRLLYLL 200

Query: 234 VEAYVALALMDEAREVVSLIQE 255
             AY    L  +A+E +  ++E
Sbjct: 201 GRAYYYTPL--QAKEEIERLKE 220


>gi|322436942|ref|YP_004219154.1| outer membrane assembly lipoprotein YfiO [Acidobacterium sp.
           MP5ACTX9]
 gi|321164669|gb|ADW70374.1| outer membrane assembly lipoprotein YfiO [Acidobacterium sp.
           MP5ACTX9]
          Length = 601

 Score =  133 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 77/187 (41%), Gaps = 3/187 (1%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ---Q 112
             +++Y+KA   +++ ++  A          +P +    ++ L  A   Y  G      Q
Sbjct: 130 PDKQLYDKAYAAIQKGHYDVARLDLQTMLNTYPDSQYQMRAKLAIADSWYKEGGTAALTQ 189

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A S   ++   +P +         +G  Y + +     D   +    +   R++  Y +S
Sbjct: 190 AESEYADFRVFFPNAPEAAEAQMRIGDIYFRQMDRPDRDHAKSIHAEEEYRRMLTDYPDS 249

Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
             V  A+  +   +  LA ++ +I  +Y  R  + A I R+Q V+  Y    H ++A+  
Sbjct: 250 TLVPQAKQRLRDVQEVLATRDADIAAFYATRENWAAVIARYQTVVDTYPLYSHMDDALIG 309

Query: 233 LVEAYVA 239
           L +AY A
Sbjct: 310 LGDAYEA 316


>gi|94967104|ref|YP_589152.1| DNA uptake lipoprotein-like [Candidatus Koribacter versatilis
           Ellin345]
 gi|94549154|gb|ABF39078.1| DNA uptake lipoprotein-like protein [Candidatus Koribacter
           versatilis Ellin345]
          Length = 497

 Score =  132 bits (334), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 100/245 (40%), Gaps = 8/245 (3%)

Query: 19  LYKFAL-TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           +++ AL T    +A     G   +   +  + ++   +  + +Y++A+  +K   F  A 
Sbjct: 1   MFRRALITAAIGLATLAATGCHNKKVSN-PIANIDSKQPDKVLYDRAMDAMKHNKFDVAR 59

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ---QAASLGEEYITQYPES-KN-VDY 132
                    +P +    ++ L      Y+ G      QA +   ++I  + +S  N    
Sbjct: 60  VTLQTLINTYPDSEFIARAKLSIGDSWYAEGGSAAMTQAENEYRDFIVFFGQSMPNESAE 119

Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
               +   +   +     D    K   +   +++ ++ +SP V  A+  +   +  LA +
Sbjct: 120 AQMKIAGIHYDEMEKPDRDYTHAKRAEEEYRQMILQFPDSPLVPKAKTRLLQVQEILAQR 179

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL-ALMDEAREVVS 251
           E  IG++Y+ R +Y AA+ R Q +   Y     ++EA+  L EA+ A   L+ +A  +  
Sbjct: 180 EFLIGKFYIMREDYPAAVARLQTLSDTYPLFSGSDEALFLLGEAHQAEANLVRKASRLAE 239

Query: 252 LIQER 256
             +  
Sbjct: 240 TQRAN 244



 Score = 44.0 bits (103), Expect = 0.025,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 50/146 (34%), Gaps = 29/146 (19%)

Query: 70  EQNF---SKAYEYFNQCSRDFPFAGVARKS-----LLMSAFV---------QYSAGKYQQ 112
           ++++    +A E + Q    FP + +  K+      +                    Y  
Sbjct: 136 DRDYTHAKRAEEEYRQMILQFPDSPLVPKAKTRLLQVQEILAQREFLIGKFYIMREDYPA 195

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSY---AQMIRDVPY---DQRAT------KLMLQ 160
           A +  +     YP     D   +L+G ++   A ++R        QRA       K  + 
Sbjct: 196 AVARLQTLSDTYPLFSGSDEALFLLGEAHQAEANLVRKASRLAETQRANAIAGFEKDAVA 255

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGR 186
             S+I+ RY  +  V+ A+  +    
Sbjct: 256 AYSKIITRYPATDRVEAAKKKLAELH 281


>gi|114321550|ref|YP_743233.1| DNA uptake lipoprotein-like protein [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114227944|gb|ABI57743.1| DNA uptake lipoprotein-like protein [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 245

 Score =  132 bits (333), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 49/228 (21%), Positives = 85/228 (37%), Gaps = 9/228 (3%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
            G    S  D             E Y   V  L E + + A E F         +  A +
Sbjct: 17  SGCATTSGPDDRR-----AGTAAEQYRAGVAALDEDDRAAARERFEALIERHATSRHAGQ 71

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----PYD 151
           +    A++ Y AG+   A          +P+  ++ Y  Y+  M+  Q   D       D
Sbjct: 72  ARAELAWLHYRAGELDAAREQASRMAETHPDHPSLPYALYVAAMAAEQQWEDSLARGEPD 131

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           QR  +        +V+      +   A   ++  R  +A  E+++ R  L+ G    A+ 
Sbjct: 132 QRLARRAFADYRAVVDLDAEDRHAGLALEAMSALREAIARHELDLARTRLEDGAADEALD 191

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           R + V  +Y  +E   +AMA  + A  +L   D+A EV  +++   P 
Sbjct: 192 RARYVGEHYPRSETLGDAMALQINALESLGEQDKAGEVRRMLRLHQPD 239


>gi|291280327|ref|YP_003497162.1| hypothetical protein DEFDS_1955 [Deferribacter desulfuricans SSM1]
 gi|290755029|dbj|BAI81406.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
          Length = 252

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 46/236 (19%), Positives = 98/236 (41%), Gaps = 12/236 (5%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           Q+ K  ++   ++ +    G      +++  D+ T        +++ + + + + + KA 
Sbjct: 4   QMKKVLVSFIITLLLFACAG-----KKEINKDAAT-------YFKEGLTYFQNKKYEKAA 51

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
             F +  +      +A K+ L  A   Y   KY  A +  + Y+  Y    +       +
Sbjct: 52  AAFEEALKKADTPELAAKAQLFLADSYYLDEKYDDAIAAYKSYLELYENQPDAKRALLRL 111

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
           G+SY  M++ +  DQ  T+       ++  +Y            +   +N LA K+  + 
Sbjct: 112 GLSYYAMLQPIDRDQSYTREAYNTFLKLNAKYPEFSKKYNIPAKLRKLKNMLAEKDFYVA 171

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           ++Y++ GE  AAI R + +L  Y D +   EA     +  + +   D+A  V+S +
Sbjct: 172 KFYVRIGEDKAAIVRLEKILKEYKDTKVYPEAALLYAKVLINIKKPDKAVSVLSQL 227


>gi|301168517|emb|CBW28107.1| putative comtepence-related protein [Bacteriovorax marinus SJ]
          Length = 245

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 42/218 (19%), Positives = 90/218 (41%), Gaps = 2/218 (0%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
                      ++++A   + +  +  A E  N     +P++  A  + L+ A V +   
Sbjct: 18  PRPEGKTEAEVLFKEAQDLINDSRYILATEKLNTLRSQYPYSFYATHAELLQADVLFKQE 77

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD-VPYDQRATKLMLQYMSRIVE 167
            Y +AA+    +   +P+ K   YV + +  S+   I D    D  A    ++Y   ++ 
Sbjct: 78  NYVEAAAAYILFKDFHPKHKKKAYVIWKIAESFYAQIPDTFDRDLSAAHEAVKYYQELLN 137

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE-HA 226
            +++S Y KG+   + + +  +  KE  IG +Y K   + AA  R+  ++  +       
Sbjct: 138 FHSDSEYSKGSIDKIKLAQGMILDKERYIGDFYYKTNVFDAARYRYLSIIDRFKSDPMLL 197

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
             +M R+VE+   L   +   +  +  +E+  Q    +
Sbjct: 198 AHSMIRVVESSHKLKDKESCTKYFNQFKEQIEQSNLKK 235


>gi|116622298|ref|YP_824454.1| DNA uptake lipoprotein-like protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116225460|gb|ABJ84169.1| DNA uptake lipoprotein-like protein [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 478

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 46/265 (17%), Positives = 100/265 (37%), Gaps = 25/265 (9%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
           F  T         L G   +  +     +    +  + +++KA+  ++   F  A     
Sbjct: 6   FRFTAAMVAVAVLLSGCGIRRKKYDNPITKDTQQPDKVLFDKAINDIEHSRFEIARLLLQ 65

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGK---YQQAASLGEEYITQYPESK---------- 128
                +  +    K+ L  A   +  G      QA +  +++I  YP  +          
Sbjct: 66  NLINTYDTSEYLAKAKLAIADAWFREGGAHGLAQAEAEYKDFILFYPAMEEAAEAQEKVC 125

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++          + + +     D +   L  Q   +++ ++ NS +   A+  +   +  
Sbjct: 126 DI----------HYKQMDKADRDPKHALLAEQECKQLILQFPNSKFAPLAQQKLRDIQEV 175

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA  E  +G  Y K+G + AA  RFQ +  ++     A+EA+ +L ++Y  +    E+++
Sbjct: 176 LADSEFRVGTLYQKKGSFPAASNRFQALADHFPLYSKADEALWQLADSYHRMGDRFESQQ 235

Query: 249 VVS--LIQERYPQGYWARYVETLVK 271
           V +   I + YP    A      ++
Sbjct: 236 VTAYQRIVKDYPLSIHAEDARAQLE 260



 Score = 35.5 bits (81), Expect = 7.8,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 36/120 (30%), Gaps = 28/120 (23%)

Query: 86  DFPFAGVARKSLLMS-------AFV-------QYSAGKYQQA----ASLGEEYITQYPES 127
            FP +  A  +           A             G +  A     +L + +    P  
Sbjct: 155 QFPNSKFAPLAQQKLRDIQEVLADSEFRVGTLYQKKGSFPAASNRFQALADHF----PLY 210

Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
              D   + +  SY +M       Q      +    RIV+ Y  S + + AR  + V + 
Sbjct: 211 SKADEALWQLADSYHRMGDRFESQQ------VTAYQRIVKDYPLSIHAEDARAQLEVMKR 264


>gi|213622690|ref|ZP_03375473.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-2068]
          Length = 116

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 51/116 (43%)

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
           +     D +  +      S++V  Y NS Y   A   +   +++LA  E  +  YY  RG
Sbjct: 1   VDRSDRDPQHARAAFNDFSKLVRSYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARG 60

Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            +VA + R + +L NY D +   +A+  +  AY  + L  +A +V  +I       
Sbjct: 61  AWVAVVNRVEGMLRNYPDTQATRDALPLMENAYRQMQLNAQADKVAKIIAANSKNT 116


>gi|83815586|ref|YP_446179.1| TPR repeat-containing protein [Salinibacter ruber DSM 13855]
 gi|294508105|ref|YP_003572163.1| Conserved hypothetical protein containing tetratricopeptide repeat
           domain [Salinibacter ruber M8]
 gi|83756980|gb|ABC45093.1| tetratricopeptide repeat domain protein [Salinibacter ruber DSM
           13855]
 gi|294344433|emb|CBH25211.1| Conserved hypothetical protein containing tetratricopeptide repeat
           domain [Salinibacter ruber M8]
          Length = 284

 Score =  128 bits (323), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 49/240 (20%), Positives = 85/240 (35%), Gaps = 14/240 (5%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
           F   + F++    LVG    +                E Y+K V  ++E +  +A  +F 
Sbjct: 6   FVPVLLFALLGA-LVGCSGGTE--------LTYSGPEEAYKKGVAEMEEGDHQQAIRFFR 56

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
                      A  +    A  Q    K+  AA+  + +   Y   + +    +    SY
Sbjct: 57  AVFEYGRGNEWAPDARFKLAMAQRGLNKHLVAANEFQRFTQLYRNDELLPRAEFERANSY 116

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
                    DQ  ++  +      ++R+ N   V  A   +   R +LA K+ E GR Y 
Sbjct: 117 YLRSPSYRLDQSDSEQAISLFRLFIDRHPNHELVPEAEEKINELRAKLARKKYEAGRLYE 176

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM----DEAREVVSLIQERY 257
           +R  + AA   ++     Y D   A++A+   V  Y+  A       +A      I E Y
Sbjct: 177 QRDMWQAATTVYERAFDQYPDTPWADDALLGAVRTYIRYADRSVESKQAERYQKAI-ENY 235



 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 10/83 (12%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS--AFVQY------- 105
           +  R+ YE   L+ +   +  A   + +    +P    A  +LL +   +++Y       
Sbjct: 163 KLARKKYEAGRLYEQRDMWQAATTVYERAFDQYPDTPWADDALLGAVRTYIRYADRSVES 222

Query: 106 -SAGKYQQAASLGEEYITQYPES 127
             A +YQ+A          +PES
Sbjct: 223 KQAERYQKAIENYNRLTQLFPES 245


>gi|213423524|ref|ZP_03356504.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
          Length = 112

 Score =  128 bits (323), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 50/112 (44%)

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
             D +  +      S++V  Y NS Y   A   +   +++LA  E  +  YY  RG +VA
Sbjct: 1   DRDPQHARAAFNDFSKLVRSYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARGAWVA 60

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            + R + +L NY D +   +A+  +  AY  + L  +A +V  +I       
Sbjct: 61  VVNRVEGMLRNYPDTQATRDALPLMENAYRQMQLNAQADKVAKIIAANSKNT 112


>gi|182415413|ref|YP_001820479.1| TPR repeat-containing protein [Opitutus terrae PB90-1]
 gi|177842627|gb|ACB76879.1| Tetratricopeptide TPR_2 repeat protein [Opitutus terrae PB90-1]
          Length = 345

 Score =  127 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 1/165 (0%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           N S+A +YF    +  P++  A  +L+  A     A + ++A    +  I QYP+S    
Sbjct: 160 NRSRAIDYFEIIVQTAPYSDYAPLALMNKARGHLRARETEEAIDALDRMINQYPQSLLAP 219

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
             Y  +  ++A ++    YDQ +TK  + Y    +  + N P V  A   +   +  LA 
Sbjct: 220 DAYLKLAQTHALLVEGPNYDQGSTKEAITYYEDFLILFPNDPNVPTAAKGLDEMKQVLAE 279

Query: 192 KEVEIGRYY-LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
            ++ IG +Y  KR  Y AA   +   + +Y D+  A+ A  +L E
Sbjct: 280 SKIRIGDFYFYKRDNYTAARVFYNEAITSYPDSPVAQRARTKLAE 324



 Score = 62.1 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 52/157 (33%), Gaps = 19/157 (12%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ- 104
           +   +         +  KA   L+ +   +A +  ++    +P + +A  + L  A    
Sbjct: 171 IVQTAPYSDYAPLALMNKARGHLRARETEEAIDALDRMINQYPQSLLAPDAYLKLAQTHA 230

Query: 105 -------YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI---------RDV 148
                  Y  G  ++A +  E+++  +P   NV       G+   + +            
Sbjct: 231 LLVEGPNYDQGSTKEAITYYEDFLILFPNDPNVPTAA--KGLDEMKQVLAESKIRIGDFY 288

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            Y +        + +  +  Y +SP  + AR  +   
Sbjct: 289 FYKRDNYTAARVFYNEAITSYPDSPVAQRARTKLAEV 325


>gi|145641511|ref|ZP_01797089.1| conserved hypothetical lipoprotein [Haemophilus influenzae R3021]
 gi|145273802|gb|EDK13670.1| conserved hypothetical lipoprotein [Haemophilus influenzae 22.4-21]
          Length = 124

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 45/101 (44%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           +        +V  + NSPY + A   +   ++ LA  E+EI ++Y KR  +VA   R   
Sbjct: 2   RTAFSNFQNLVRVFPNSPYAQDALARMAYIKDALARHELEIAKFYAKRKAWVAVANRVVG 61

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           +L  Y D +   E +  + EAY  + L   A +   +I   
Sbjct: 62  MLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKIIDAN 102


>gi|325281824|ref|YP_004254366.1| outer membrane assembly lipoprotein YfiO [Odoribacter splanchnicus
           DSM 20712]
 gi|324313633|gb|ADY34186.1| outer membrane assembly lipoprotein YfiO [Odoribacter splanchnicus
           DSM 20712]
          Length = 266

 Score =  126 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/220 (23%), Positives = 92/220 (41%), Gaps = 10/220 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           VY+KA+ +  + ++ +A    +     F     A+      AF  Y+   YQ A+ L ++
Sbjct: 32  VYKKAIEYYNKGDYQRAMNLLDGVRSVFVGQAKAQNIAYYRAFCSYNMKDYQIASDLFKQ 91

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           +I  YPES   +   Y++G    +       DQ+ T+  ++     + RY  S       
Sbjct: 92  FIQTYPESSFAEECLYMMGFCDYKASPKPRLDQQVTEKAIREFQLYLSRYPYSMRKDKVN 151

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
            Y+   R++L+ K     + Y  R  Y AA+   Q  L +Y  +++ EE M  L  +   
Sbjct: 152 TYMDEMRDKLSYKAYLSAKNYYLREHYKAAVISLQNCLKDYPGSKYREEIMYMLFVSKYQ 211

Query: 240 LALM----------DEAREVVSLIQERYPQGYWARYVETL 269
           +A+           + ARE      + YP   +A  V+ +
Sbjct: 212 MAVNSVEDKKVERYNNAREEYYYFADEYPNSRYAADVKKM 251



 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 51/146 (34%), Gaps = 18/146 (12%)

Query: 67  FLKEQNFSKAYEYFNQCSRDFPFA---------------GVARKSLLMSAFVQYSAGKYQ 111
            L +Q   KA   F      +P++                ++ K+ L SA   Y    Y+
Sbjct: 121 RLDQQVTEKAIREFQLYLSRYPYSMRKDKVNTYMDEMRDKLSYKAYL-SAKNYYLREHYK 179

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK--LMLQYMSRIVERY 169
            A    +  +  YP SK  + + Y++ +S  QM  +   D++  +     +      + Y
Sbjct: 180 AAVISLQNCLKDYPGSKYREEIMYMLFVSKYQMAVNSVEDKKVERYNNAREEYYYFADEY 239

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVE 195
            NS Y    +         L   + E
Sbjct: 240 PNSRYAADVKKMYEDIEAYLENYKFE 265


>gi|326799177|ref|YP_004316996.1| outer membrane assembly lipoprotein YfiO [Sphingobacterium sp. 21]
 gi|326549941|gb|ADZ78326.1| outer membrane assembly lipoprotein YfiO [Sphingobacterium sp. 21]
          Length = 298

 Score =  126 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 56/256 (21%), Positives = 101/256 (39%), Gaps = 13/256 (5%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           + ++ A+ F +G     S+   L +  D   +   Y +A+     + +SKA   F   S 
Sbjct: 1   MIWASALLFSIGMIGCKSKFEKLRTGNDNVAK---YREAINLYNNKKYSKALILFEDLSN 57

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
            +       + +   A+  Y    Y  A    + +  QYP+S+  +   ++    Y    
Sbjct: 58  KYRGRPENEELMYYFAYTNYRLRDYTSARFHFKNFTDQYPQSQRAEECRFMGAYCYYLES 117

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
                DQ  T   ++ +   +  Y  S   + A  ++   R++L  K     + YL  G+
Sbjct: 118 PVYTLDQENTLKAIESLQLFINLYPKSDRAEEAAKFIQDLRDKLEHKSYANAKLYLDVGD 177

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM----------DEAREVVSLIQE 255
           Y AA+  FQ  L +Y D ++AEE     +EA    A             EA E  +   +
Sbjct: 178 YKAAVIAFQNSLRDYPDTKYAEEMEYLAIEAQYLYAKNSQLPSQEARYQEAVEFSNRFID 237

Query: 256 RYPQGYWARYVETLVK 271
            YP+  + +  E+L K
Sbjct: 238 NYPESKYKKDAESLKK 253


>gi|295135083|ref|YP_003585759.1| nuclear transition protein [Zunongwangia profunda SM-A87]
 gi|294983098|gb|ADF53563.1| nuclear transition protein [Zunongwangia profunda SM-A87]
          Length = 281

 Score =  125 bits (314), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 50/245 (20%), Positives = 86/245 (35%), Gaps = 16/245 (6%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
            L             ++     +   +Y +A     ++ + KA   F Q    +      
Sbjct: 18  VLQSCGDYQKVLKSDNAGDKYTFAENLYNEAKAEDSKRKYRKAIRLFEQILPQYRGKPQG 77

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
            K   + A   Y  G Y  ++   E ++  YP S  V+   +    SY +       DQ 
Sbjct: 78  EKLSYLFADSYYQVGDYYLSSFEFERFVQSYPNSDKVEEASFKSAKSYYEESPRFDLDQT 137

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR------GEYV 207
            T   ++ +   + RY    Y + A    T  R +L  K  EI + Y +       G + 
Sbjct: 138 DTNKAIEALQSYLNRYPEGEYAEEANLMATELRLKLEKKAFEIAKQYWRIGGNYREGNFT 197

Query: 208 AAIPRFQLVLANYSDAEHAEEAMA--------RLVEAYVAL--ALMDEAREVVSLIQERY 257
           AAI  F   +A+Y    + EEA            + +Y  L    +  A E     ++ Y
Sbjct: 198 AAITSFNNFIADYPGTPYREEAFYLRFDAAYSYAINSYRNLMQERLQAALEYYQAYKKSY 257

Query: 258 PQGYW 262
           P+G +
Sbjct: 258 PEGEY 262



 Score = 53.6 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 48/158 (30%), Gaps = 23/158 (14%)

Query: 55  RYQREVYEKA-VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS------------- 100
           +  +  YE++    L + + +KA E        +P    A ++ LM+             
Sbjct: 120 KSAKSYYEESPRFDLDQTDTNKAIEALQSYLNRYPEGEYAEEANLMATELRLKLEKKAFE 179

Query: 101 -------AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV--GMSYAQMIRDVPYD 151
                      Y  G +  A +    +I  YP +   +  +YL         +       
Sbjct: 180 IAKQYWRIGGNYREGNFTAAITSFNNFIADYPGTPYREEAFYLRFDAAYSYAINSYRNLM 239

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
           Q   +  L+Y     + Y    Y+          + +L
Sbjct: 240 QERLQAALEYYQAYKKSYPEGEYMANVDESYQDIQARL 277


>gi|149917378|ref|ZP_01905876.1| putative competence lipoprotein ComL [Plesiocystis pacifica SIR-1]
 gi|149821715|gb|EDM81111.1| putative competence lipoprotein ComL [Plesiocystis pacifica SIR-1]
          Length = 394

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 49/238 (20%), Positives = 90/238 (37%), Gaps = 10/238 (4%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
           A+   V     +       S    +  RE YE A      Q++  A  Y       FP++
Sbjct: 2   ALSLAVAGGASACATGPNLSSDYSQTARENYELAQASFDNQDWEDAAAYARFVRERFPYS 61

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV--DYVYYLVGMSYAQMIRD- 147
              R++ L+ A V Y   +Y  A      ++ ++P  ++V   +V Y+V +S        
Sbjct: 62  RYVREAKLLEARVLYELKEYPSAQDAFRMFMAEHPTHEHVVNGWVPYMVAVSAYMASPSS 121

Query: 148 -------VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
                     DQ   +  L  +    +RY+ +     AR        +L   E+ + R++
Sbjct: 122 VPFLPPHFQRDQELLRQTLMELEVFFDRYSGTRMEPLARKLEAEVNRRLLEHELYVARFH 181

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           L R    AAI R       Y+      E +  L   Y+ +  ++  R+  + +Q ++P
Sbjct: 182 LDRDRPEAAIMRLSSAHDRYAGIGLDAEVLFLLGITYLRVGEVELGRQTFTELQMQHP 239


>gi|150025880|ref|YP_001296706.1| lipoprotein [Flavobacterium psychrophilum JIP02/86]
 gi|149772421|emb|CAL43903.1| Probable lipoprotein [Flavobacterium psychrophilum JIP02/86]
          Length = 264

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 55/260 (21%), Positives = 94/260 (36%), Gaps = 19/260 (7%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           K  L  F  IA+                D         ++YEK         ++KA   F
Sbjct: 2   KKILYTFLIIAL--FSSCSEYQKAIKSEDVAVKTAAATKMYEK-------GKYAKAIRLF 52

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
            Q S        A     M +   Y  G+Y  +    E +   YP+SKN +   +L   S
Sbjct: 53  EQISPVLKGKPEAENVFYMFSQSYYKTGQYYLSGYQFESFAALYPKSKNTEEAAFLGAKS 112

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
           Y+++      DQ  T   +  +   + +Y NS Y+  A   V   R +L  K  EI + Y
Sbjct: 113 YSELSPTYSLDQTDTDKAINKLQNFINKYPNSKYLADANVVVKDLREKLEKKAFEIAKQY 172

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM----------DEAREVV 250
               ++  AI      +A+Y    + E+A+   + A   LA+           + A+E  
Sbjct: 173 NTISDFKPAIKALDNFIADYPGTPYKEKALFYKLNASYQLAINSVPSKMQARLNVAKEAQ 232

Query: 251 SLIQERYPQGYWARYVETLV 270
             +    P   + +  + ++
Sbjct: 233 EALLNFNPNTEFKKTADEML 252



 Score = 35.9 bits (82), Expect = 6.8,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 33/80 (41%), Gaps = 8/80 (10%)

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA--------LMDEAREVVS 251
           Y K G+Y  +  +F+   A Y  +++ EEA     ++Y  L+          D+A   + 
Sbjct: 76  YYKTGQYYLSGYQFESFAALYPKSKNTEEAAFLGAKSYSELSPTYSLDQTDTDKAINKLQ 135

Query: 252 LIQERYPQGYWARYVETLVK 271
               +YP   +      +VK
Sbjct: 136 NFINKYPNSKYLADANVVVK 155


>gi|227536026|ref|ZP_03966075.1| conserved hypothetical lipoprotein [Sphingobacterium spiritivorum
           ATCC 33300]
 gi|227244139|gb|EEI94154.1| conserved hypothetical lipoprotein [Sphingobacterium spiritivorum
           ATCC 33300]
          Length = 304

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 46/265 (17%), Positives = 99/265 (37%), Gaps = 19/265 (7%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
            +    +   + + F+ G + +  +    +++         Y++AV F +++ ++KA   
Sbjct: 5   RRLVAVVAGLLLIVFISGCKSKFEKLRASNNLALK------YQEAVKFYEKKKYTKALAL 58

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
           F+   + +     A      +A+  Y    Y  A    +++   +P S   +   ++   
Sbjct: 59  FDDLMQRYRGQAEAEDLYYYTAYTNYRLKDYTSARYHFKQFAQTFPNSAKAEECRFMTAY 118

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
            +         DQ  T+  +  +   V  Y  S   K A   +   R++L  K     + 
Sbjct: 119 CFYLDSPRSSLDQENTRKAIDELQLFVNLYPESEKAKEASDLIQQLRDKLEKKAFSNAKL 178

Query: 200 YLKRG---EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD----EAREVVSL 252
           Y   G   +Y AA+   + VL +Y D ++AEE    +++A    A       +      +
Sbjct: 179 YYDMGLNDDYKAAVIALENVLKDYPDTKYAEEINYLIIKAQFRYAEKSTPRRQEERYSKV 238

Query: 253 IQE------RYPQGYWARYVETLVK 271
           I         YP+    + V+ + K
Sbjct: 239 IDYYQDFVDDYPESKHRKEVDDIRK 263


>gi|300771724|ref|ZP_07081599.1| conserved hypothetical lipoprotein [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|300761713|gb|EFK58534.1| conserved hypothetical lipoprotein [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 304

 Score =  122 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 46/265 (17%), Positives = 98/265 (36%), Gaps = 19/265 (7%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
            +    +   + + F+ G + +  +    +++         Y++AV F +++ ++KA   
Sbjct: 5   RRLVAVVAGLLLIVFISGCKSKFEKLRASNNLALK------YQEAVKFYEKKKYTKALAL 58

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
           F+   + +     A      +A+  Y    Y  A    +++   +P S   +   ++   
Sbjct: 59  FDDLMQRYRGQAEAEDLYYYTAYTNYRLKDYTSARYHFKQFAQTFPNSAKAEECRFMTAY 118

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
            +         DQ  T+  +  +   V  Y  S   K A   +   R++L  K     + 
Sbjct: 119 CFYLDSPRSSLDQENTRKAIDELQLFVNLYPESEKAKEAADLIQQLRDKLEKKAFSNAKL 178

Query: 200 YLKRG---EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD----EAREVVSL 252
           Y   G   +Y AA+   + VL  Y D ++AEE    +++A    A       +      +
Sbjct: 179 YYDMGLNDDYKAAVIALENVLKEYPDTKYAEEINYLIIKAQFRYAEKSTPRRQEERYSKV 238

Query: 253 IQE------RYPQGYWARYVETLVK 271
           I         YP+    + V+ + K
Sbjct: 239 IDYYQDFVDDYPESKHRKEVDDIRK 263


>gi|319955738|ref|YP_004167005.1| outer membrane assembly lipoprotein yfio [Cellulophaga algicola DSM
           14237]
 gi|319424398|gb|ADV51507.1| outer membrane assembly lipoprotein YfiO [Cellulophaga algicola DSM
           14237]
          Length = 274

 Score =  122 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 90/227 (39%), Gaps = 16/227 (7%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A  F + +++ +A     Q +  +       + +   A   Y    Y  A    E +
Sbjct: 37  YDMAEKFYEAKDYKRANRLLEQITPKYIGKPQGERVMFFLADSYYQIKDYNTAGYQFERF 96

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +  YP+S       +LV  SY  +  D   DQ  T   LQ +   +  +  S ++  A  
Sbjct: 97  LKSYPKSDKAQESGFLVAKSYYMLSPDYSLDQTDTDKALQKLQTFINTFPESEFMPEANQ 156

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEY------VAAIPRFQLVLANYSDAEHAEEAMARLV 234
                  +   K +EIG+ + K GEY      ++A       + ++  + + E+A+   +
Sbjct: 157 MAKDLTQKKELKAIEIGKQFTKLGEYYTLDFSISAAAAMDNFILDFPGSIYKEDALFYKM 216

Query: 235 EAYVALALM----------DEAREVVSLIQERYPQGYWARYVETLVK 271
           +A   LAL            EA+   + +++ +P+  + +    +++
Sbjct: 217 KALSNLALNSTEQKKKERLQEAKTAYNTLKKNFPETQFEKDANNMME 263



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/148 (11%), Positives = 44/148 (29%), Gaps = 22/148 (14%)

Query: 67  FLKEQNFSKAYEYFNQCSRDFPFAGV-----------ARKSLLMSAFV---------QYS 106
            L + +  KA +        FP +              +K  L +  +          Y+
Sbjct: 125 SLDQTDTDKALQKLQTFINTFPESEFMPEANQMAKDLTQKKELKAIEIGKQFTKLGEYYT 184

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYY--LVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
                 AA+  + +I  +P S   +   +  +  +S   +       +   +      + 
Sbjct: 185 LDFSISAAAAMDNFILDFPGSIYKEDALFYKMKALSNLALNSTEQKKKERLQEAKTAYNT 244

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAK 192
           + + +  + + K A   +     +L   
Sbjct: 245 LKKNFPETQFEKDANNMMEKVEKELQNY 272


>gi|86144192|ref|ZP_01062528.1| lipoprotein protein, putative [Leeuwenhoekiella blandensis MED217]
 gi|85829322|gb|EAQ47788.1| lipoprotein protein, putative [Leeuwenhoekiella blandensis MED217]
          Length = 268

 Score =  122 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 90/255 (35%), Gaps = 17/255 (6%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
           T+   + V  L             D      +   +Y           + K+ + + Q  
Sbjct: 9   TLVILLTVISLASCSEYQEALKSEDMGLKYSFADSLY-------DAGKYRKSVKLWEQIV 61

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
             +     A + + + A   Y    Y  A    + +++ YP+S   +   Y   +SYA++
Sbjct: 62  PAYRGKPQAERIMYLYADSHYQVEDYYLAGYQFDRFVSAYPDSDKAEEAQYKAAVSYAEL 121

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
             +   DQ  T+  L Y+ + +  Y  S Y   A   +     +L  K   + + + K  
Sbjct: 122 SPNYQLDQSETEKGLDYLQQFITAYPESEYAADASERIKELSIKLQKKSYMVAKGWHKIM 181

Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM----------DEAREVVSLIQ 254
           +Y  AI  F   L++Y  +   E A    +++                 +EA E+   + 
Sbjct: 182 DYPVAISAFDDFLSDYPGSPFREAAFFYKLDSQYQYGSKSIYVLVKPRLEEAIEMYETLI 241

Query: 255 ERYPQGYWARYVETL 269
             +P+G +    + +
Sbjct: 242 RYFPEGEYRAQADEI 256


>gi|332882672|ref|ZP_08450284.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332679472|gb|EGJ52457.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 287

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 50/221 (22%), Positives = 85/221 (38%), Gaps = 10/221 (4%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +A    K + + KA + F Q + ++       +   +     Y   +Y  A    E  
Sbjct: 54  YAEAEKQYKAKKYRKAVKLFEQIASEYSGKPQGERLYFLQGDAYYQMKQYSLATYPFERL 113

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
              YP S       +L   S    +     DQ  T   L+ +   ++RY++S Y K A  
Sbjct: 114 QKIYPRSAKAVEAAFLEAKSLYMQVPTYSVDQTYTYQALEKLQYFMDRYSDSDYAKEANE 173

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA-RLVEAYV- 238
            +     QL  KE EI + Y    +Y AA+      LAN   +   E+A+  RL  AY  
Sbjct: 174 LILNLLTQLQKKEFEIAKQYDLIRDYQAAMKSLDNFLANNPGSVFREDALYTRLHSAYEW 233

Query: 239 --------ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
                       +D A+E    +   +P+  + +  + ++K
Sbjct: 234 AINSVESKQKERLDTAKEAYDTLLRAFPETKYKKEADNMLK 274



 Score = 39.3 bits (91), Expect = 0.62,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 36/131 (27%), Gaps = 16/131 (12%)

Query: 75  KAYEYFNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEY 120
           +A E        +  +  A+++                  A        YQ A    + +
Sbjct: 150 QALEKLQYFMDRYSDSDYAKEANELILNLLTQLQKKEFEIAKQYDLIRDYQAAMKSLDNF 209

Query: 121 ITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRA-TKLMLQYMSRIVERYTNSPYVKGA 178
           +   P S   +   Y    S  +  I  V   Q+       +    ++  +  + Y K A
Sbjct: 210 LANNPGSVFREDALYTRLHSAYEWAINSVESKQKERLDTAKEAYDTLLRAFPETKYKKEA 269

Query: 179 RFYVTVGRNQL 189
              +      L
Sbjct: 270 DNMLKKINTSL 280


>gi|299135640|ref|ZP_07028824.1| outer membrane assembly lipoprotein YfiO [Acidobacterium sp.
           MP5ACTX8]
 gi|298601764|gb|EFI57918.1| outer membrane assembly lipoprotein YfiO [Acidobacterium sp.
           MP5ACTX8]
          Length = 611

 Score =  119 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 81/205 (39%), Gaps = 5/205 (2%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
           ++ S+     S       +++Y+KA+   K  ++  A          +P +    ++ L 
Sbjct: 98  KRDSKLQPQLSKDAQLPDKQLYDKALAQSKSGHYDVARLDLQTLLNTYPDSQYQMRAKLA 157

Query: 100 SAFVQYSAG---KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
            A   Y  G      QA     ++IT +P           VG  Y + +     D     
Sbjct: 158 VADSFYREGGSAALAQAEQEYTDFITFFPNVPEAAEAQMRVGDIYLKQMDVPDRDYTKAL 217

Query: 157 LMLQYMSRIVERYTNSP--YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
              +    ++ +Y ++P   ++  R  +   +  +A +E E+G +Y     + A I R+Q
Sbjct: 218 KAEEAYRTMLRQYRDAPPKLLEEVRQKLREVQEVMATREAELGAFYASHENWAATIARYQ 277

Query: 215 LVLANYSDAEHAEEAMARLVEAYVA 239
            V+  Y    H ++A+  L +AY A
Sbjct: 278 TVIDQYPQYSHMDDALIGLGDAYAA 302


>gi|225013058|ref|ZP_03703473.1| DNA uptake lipoprotein-like protein [Flavobacteria bacterium
           MS024-2A]
 gi|225002786|gb|EEG40767.1| DNA uptake lipoprotein-like protein [Flavobacteria bacterium
           MS024-2A]
          Length = 275

 Score =  118 bits (297), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 45/229 (19%), Positives = 90/229 (39%), Gaps = 10/229 (4%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           +     E Y++A ++     + KA   F Q    +     A++ +   A   +    Y  
Sbjct: 29  NSDDASEKYKQAEVYYNSGEYRKANRLFEQIIPKYRGKAQAQRIIFFFADSYFQTKSYYL 88

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           AA   E +I  YP+S  +    +    SY         DQ  T   ++ +   +  Y NS
Sbjct: 89  AAYQYENFIKSYPQSDRIQEATFKAAKSYYFSSPKFSLDQEDTYTAIEKLQVFINLYPNS 148

Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
            ++  A   ++  + +L  K+ EI + Y    +Y +AI   +  +A++   ++ E A+  
Sbjct: 149 EFIVEANQMISELQEKLEQKDFEIAKQYYTIRDYQSAIKSSENFIASFPGTKYRESALFN 208

Query: 233 LVEAYV----------ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
             +A             L  + E ++   +I   YP+  +   +E  +K
Sbjct: 209 KFKASYEIAVNSVFSKKLDRLQELQQQYEVILRYYPETLFLSELEDKMK 257


>gi|86131754|ref|ZP_01050351.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
 gi|85817576|gb|EAQ38750.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
          Length = 270

 Score =  117 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 95/254 (37%), Gaps = 21/254 (8%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
           F  +AV  L             D      +   +Y +         + KA + + Q    
Sbjct: 6   FLLVAVVLLSSCSAYQDVLKNDDIKAKYTFADSLYSQ-------GKYKKALKLWEQIVPL 58

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
           +     A +   + A   Y  G Y Q     E ++  +P+S+  +   Y    SY     
Sbjct: 59  YRGRPQAERVSYLYANTFYELGDYYQGGYQFERFVKSFPQSEKREEAAYKSAESYYNRSP 118

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK---- 202
               DQ  T + +  +   + +Y +S  +  A   V     ++  K  EI + Y K    
Sbjct: 119 RFNLDQGDTYIAMGKLQDFINQYPDSERLDDANAKVQELNQKIERKAYEIAKGYNKIGES 178

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL----------MDEAREVVSL 252
           RG +  AI  F   L ++  +++ E+A+     +   LAL          +++A+E  + 
Sbjct: 179 RGTFPNAIKAFDNFLLDFPGSKYREDALYWKFNSTYQLALGSVRRRKAERLEDAKEAYNA 238

Query: 253 IQERYPQGYWARYV 266
           +++ +P+G ++   
Sbjct: 239 LEKYFPEGKYSEQA 252



 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 18/156 (11%), Positives = 43/156 (27%), Gaps = 21/156 (13%)

Query: 55  RYQREVYEKA-VLFLKEQNFSKAYEYFNQCSRDFPFAG--------------VARKSLLM 99
           +     Y ++    L + +   A          +P +                  +    
Sbjct: 108 KSAESYYNRSPRFNLDQGDTYIAMGKLQDFINQYPDSERLDDANAKVQELNQKIERKAYE 167

Query: 100 SAFVQYSAGK----YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
            A      G+    +  A    + ++  +P SK  +   Y    S  Q+       ++A 
Sbjct: 168 IAKGYNKIGESRGTFPNAIKAFDNFLLDFPGSKYREDALYWKFNSTYQLALGSVRRRKAE 227

Query: 156 K--LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
           +     +  + + + +    Y + A   V      L
Sbjct: 228 RLEDAKEAYNALEKYFPEGKYSEQAAEEVAAVNEAL 263


>gi|195953522|ref|YP_002121812.1| putative lipoprotein [Hydrogenobaculum sp. Y04AAS1]
 gi|195933134|gb|ACG57834.1| putative lipoprotein [Hydrogenobaculum sp. Y04AAS1]
          Length = 308

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 82/229 (35%), Gaps = 7/229 (3%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
           F L++    A   +    + + ++    ++       E +        E+N  +A +Y  
Sbjct: 8   FTLSMVILGASLMVSSCAKVTQKEREQRAINGYIKGSEAFTNGDYSSAEENLKRALKYLE 67

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
                        ++  M A   Y    Y  A    E ++  YP S       Y++  SY
Sbjct: 68  NL-----TPEQIERARFMLAKSYYLDHDYTNAIIYLESFLYYYPNSPEAPQATYMLIKSY 122

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            ++  D   DQ  T   +      + +Y N+PY    R  +   R ++A  +  I ++Y 
Sbjct: 123 YKIAPDAYRDQTYTYKAIDLAKEFLSKYPNNPYDSDVRALIDKARQKIAKHDELIAKFYE 182

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
             G Y  A  R++ +L N  D ++  +           L +  +A+   
Sbjct: 183 DYGFYYPAAERYKDMLIN--DTQYISKTKTYYRLIKNLLLVPKQAKRYE 229



 Score = 38.9 bits (90), Expect = 0.69,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 33/85 (38%), Gaps = 8/85 (9%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA--------LMDE 245
             + + Y    +Y  AI   +  L  Y ++  A +A   L+++Y  +A           +
Sbjct: 79  FMLAKSYYLDHDYTNAIIYLESFLYYYPNSPEAPQATYMLIKSYYKIAPDAYRDQTYTYK 138

Query: 246 AREVVSLIQERYPQGYWARYVETLV 270
           A ++      +YP   +   V  L+
Sbjct: 139 AIDLAKEFLSKYPNNPYDSDVRALI 163


>gi|260911827|ref|ZP_05918394.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
           F0295]
 gi|260634038|gb|EEX52161.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
           F0295]
          Length = 274

 Score =  115 bits (289), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 51/267 (19%), Positives = 94/267 (35%), Gaps = 27/267 (10%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            +  S AV  L    ++ ++    D+V         YE A     +  + +A     +  
Sbjct: 5   LLIISTAVLLLSSCAQEFNQVYKSDNVQYK------YEYAKECFAKGKYVRAITLLQELV 58

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
                   A++SL M A  +Y++  Y+ AA   ++Y   YP+ +  +   + VG S    
Sbjct: 59  TLQKGTENAQESLYMLAMAEYNSKDYETAAQYFKKYFQSYPKGRYAEIAQFYVGQSLFMS 118

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
             +   DQ  T   +      ++ Y +S     A+  +   +++L  KE+   + Y   G
Sbjct: 119 TPEPRLDQSRTIQAITDFQTFLDLYPDSKLKPQAQQRLFDLQDKLVEKELHTAQLYYDLG 178

Query: 205 -----------EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM---------- 243
                       Y A I   Q  L +Y  +   E+    L+++   LA            
Sbjct: 179 TYFGNCNYGGNNYEACIITSQNALKDYPYSRLREDFAVLLMKSKFELAQQSVETKKLERF 238

Query: 244 DEAREVVSLIQERYPQGYWARYVETLV 270
            +A +        YP        E L+
Sbjct: 239 QDAEDECYGFINEYPDSKERTLAEKLI 265


>gi|288927578|ref|ZP_06421425.1| lipoprotein [Prevotella sp. oral taxon 317 str. F0108]
 gi|288330412|gb|EFC68996.1| lipoprotein [Prevotella sp. oral taxon 317 str. F0108]
          Length = 270

 Score =  115 bits (288), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 89/257 (34%), Gaps = 27/257 (10%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           +  S A   L     + ++    D++         YE A     +  + +A     +   
Sbjct: 2   LIISTAALLLSSCAHEFNQVYKSDNMQYK------YEYAKECFAKGKYVRAITLLQELVT 55

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
                  A++SL M A  QY++  Y+ AA   ++Y   YP+ +  +   + VG S     
Sbjct: 56  LQKGTENAQESLYMLAMAQYNSKDYETAAQYFKKYYQSYPKGRYAEMAQFYVGQSLFMST 115

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG- 204
            +   DQ  T   +      ++ Y +S     A+  +   +++L  KE+   + Y   G 
Sbjct: 116 PEPRLDQSRTIQAITDFQTFLDLYPDSKLKPQAQQRLFDLQDKLVEKELYTAKLYYDLGT 175

Query: 205 ----------EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM----------D 244
                      Y A I   Q  L +Y  +   E+    L+++   LA             
Sbjct: 176 YFGNCNFGGNNYEACIITSQNALKDYPYSRLREDFAVLLMKSKFELAQQSVETKKLERFQ 235

Query: 245 EAREVVSLIQERYPQGY 261
           +A +        YP   
Sbjct: 236 DAEDECYGFINEYPDSK 252


>gi|88803410|ref|ZP_01118936.1| hypothetical protein PI23P_12497 [Polaribacter irgensii 23-P]
 gi|88780976|gb|EAR12155.1| hypothetical protein PI23P_12497 [Polaribacter irgensii 23-P]
          Length = 270

 Score =  115 bits (288), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 48/236 (20%), Positives = 85/236 (36%), Gaps = 15/236 (6%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
            V +     E Y+ AV   + QN+ KA   F + +  +       +   M A   ++   
Sbjct: 9   KVLNKGATEEQYKMAVKMYETQNYDKAIRLFEKVTPSYRGKPQMERIEFMVAQSNFNEKN 68

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y  A      +   + +S   +   +L   SY         D   T   L      +  Y
Sbjct: 69  YSIAGFYFNRFTNNFTKSSKKEEAAFLAAYSYKLASPRFSIDPTETNKALDAFQSFINTY 128

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR-----GEYVAAIPRFQLVLANYSDAE 224
            NS  +  A  Y    R++L  K  EI + Y K        Y AAI  F  +L ++   +
Sbjct: 129 PNSDKIIEANKYYAEIRSKLEKKYFEIAKTYYKTADYDLRNYKAAIQAFDNLLEDFLGTK 188

Query: 225 HAEEAMARLVEAY----------VALALMDEAREVVSLIQERYPQGYWARYVETLV 270
           + EEA+   ++A             L  ++ A E    +Q+ +P+  +      ++
Sbjct: 189 YKEEALYFQLKAAHDFVLKSTDRRKLERIESAVEAHERLQKSFPESIYTEDANAML 244



 Score = 38.9 bits (90), Expect = 0.77,   Method: Composition-based stats.
 Identities = 18/134 (13%), Positives = 38/134 (28%), Gaps = 21/134 (15%)

Query: 74  SKAYEYFNQCSRDFPFAG--------VAR-KSLLM-----SAFVQYSAGKYQ-----QAA 114
           +KA + F      +P +          A  +S L       A   Y    Y       A 
Sbjct: 115 NKALDAFQSFINTYPNSDKIIEANKYYAEIRSKLEKKYFEIAKTYYKTADYDLRNYKAAI 174

Query: 115 SLGEEYITQYPESKNVDYVYY--LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
              +  +  +  +K  +   Y  L       +           +  ++   R+ + +  S
Sbjct: 175 QAFDNLLEDFLGTKYKEEALYFQLKAAHDFVLKSTDRRKLERIESAVEAHERLQKSFPES 234

Query: 173 PYVKGARFYVTVGR 186
            Y + A   +   +
Sbjct: 235 IYTEDANAMLATLQ 248


>gi|254495492|ref|ZP_05108416.1| conserved hypothetical protein [Polaribacter sp. MED152]
 gi|85819847|gb|EAQ41004.1| conserved hypothetical protein [Polaribacter sp. MED152]
          Length = 289

 Score =  114 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 50/236 (21%), Positives = 87/236 (36%), Gaps = 15/236 (6%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
            V +     E Y+ AV   + + FSKA   F + +  +       +   M A   ++   
Sbjct: 25  KVLNKGSVEEKYKMAVKMYETKKFSKALRLFEKVTPAYRGKPQMERIQFMVAQSNFNVKN 84

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y  A    + +   YP S   +   +L   SY         D   T+  L+     +  Y
Sbjct: 85  YTTAGYYFDRFTKNYPSSSKNEEAAFLSAYSYKLASPVSSKDPTDTRKALESFQMFINNY 144

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYY-----LKRGEYVAAIPRFQLVLANYSDAE 224
            +S  ++ A  +    R +L  K  +I + Y          Y AAI  F  +LA+Y  +E
Sbjct: 145 PDSDKIEEANQHYKELRYKLQKKYFDIAKVYYTTADYDMRNYKAAIQAFDNLLADYLGSE 204

Query: 225 HAEEAM-ARLVEAYVALALMDEAREVVSL---------IQERYPQGYWARYVETLV 270
             EEA+  RL  A+  +    E R+   +         +   YP+  +      ++
Sbjct: 205 FKEEALFYRLKAAHDFVLKSTERRKPERIKDAIEAYDKLVRNYPESQYLEEANEML 260



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 55/190 (28%), Gaps = 66/190 (34%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG--------KYQQAAS 115
           A      +N++ A  YF++ ++++P +    ++  +SA+    A           ++A  
Sbjct: 76  AQSNFNVKNYTTAGYYFDRFTKNYPSSSKNEEAAFLSAYSYKLASPVSSKDPTDTRKALE 135

Query: 116 LGEEYITQYPESK---------------------NVDYVYY------------------- 135
             + +I  YP+S                      ++  VYY                   
Sbjct: 136 SFQMFINNYPDSDKIEEANQHYKELRYKLQKKYFDIAKVYYTTADYDMRNYKAAIQAFDN 195

Query: 136 ------------------LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
                             L       +           K  ++   ++V  Y  S Y++ 
Sbjct: 196 LLADYLGSEFKEEALFYRLKAAHDFVLKSTERRKPERIKDAIEAYDKLVRNYPESQYLEE 255

Query: 178 ARFYVTVGRN 187
           A   +T  + 
Sbjct: 256 ANEMLTTLQK 265


>gi|213585273|ref|ZP_03367099.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-0664]
          Length = 99

 Score =  114 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 41/91 (45%)

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
           +     D +  +      S++V  Y NS Y   A   +   +++LA  E  +  YY  RG
Sbjct: 9   VDRSDRDPQHARAAFNDFSKLVRSYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARG 68

Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
            +VA + R + +L NY D +   +A+  +  
Sbjct: 69  AWVAVVNRVEGMLRNYPDTQATRDALPLMEN 99


>gi|89891617|ref|ZP_01203121.1| conserved hypothetical lipoprotein [Flavobacteria bacterium BBFL7]
 gi|89516164|gb|EAS18827.1| conserved hypothetical lipoprotein [Flavobacteria bacterium BBFL7]
          Length = 264

 Score =  113 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 84/216 (38%), Gaps = 10/216 (4%)

Query: 66  LFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
             L  + + KA   F+Q    +     A    +  A   Y    Y  +A   E ++  +P
Sbjct: 38  TLLNREKYGKAVNLFDQIIPQYRGTDKAEALSIKYAKALYETKDYPNSAYQYERFVQSHP 97

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            S++ ++  Y+   S+  M       Q  T   L  +   +  Y +  YV+ A   V+  
Sbjct: 98  ASEDREFAAYMGAKSHYHMSAVYSKSQVNTDRALAKLQDYINLYPDGEYVEEANDLVSEL 157

Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM-- 243
           R +L  K  EI + Y  R  Y+ AI  F+  +  +  ++  ++A   L+++    A+   
Sbjct: 158 RYKLDRKAYEIAKNYHHRSRYIPAIKSFENFIIQHPGSDFMDDAQFYLIDSQYLYAIKSR 217

Query: 244 --------DEAREVVSLIQERYPQGYWARYVETLVK 271
                   + A +  +    R+P   +    + +++
Sbjct: 218 EELVPERLEAATKYYNTFVSRFPASEYREDADEIME 253



 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 40/132 (30%), Gaps = 16/132 (12%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLG 117
           N  +A          +P      ++                  A   +   +Y  A    
Sbjct: 126 NTDRALAKLQDYINLYPDGEYVEEANDLVSELRYKLDRKAYEIAKNYHHRSRYIPAIKSF 185

Query: 118 EEYITQYPESKNVDYVY-YLVGMSYAQMIRDVP-YDQRATKLMLQYMSRIVERYTNSPYV 175
           E +I Q+P S  +D    YL+   Y   I+          +   +Y +  V R+  S Y 
Sbjct: 186 ENFIIQHPGSDFMDDAQFYLIDSQYLYAIKSREELVPERLEAATKYYNTFVSRFPASEYR 245

Query: 176 KGARFYVTVGRN 187
           + A   +    +
Sbjct: 246 EDADEIMENIND 257


>gi|282878378|ref|ZP_06287170.1| outer membrane assembly lipoprotein YfiO [Prevotella buccalis ATCC
           35310]
 gi|281299564|gb|EFA91941.1| outer membrane assembly lipoprotein YfiO [Prevotella buccalis ATCC
           35310]
          Length = 282

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 53/267 (19%), Positives = 96/267 (35%), Gaps = 24/267 (8%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           +FF   +C  + +   +S    +   TD  Y+   YE A     +  +++A    N    
Sbjct: 6   LFFISTICVALLFGSCASEFNAVYKSTDTNYR---YEYAKECFFKGKYTRAITLLNDLIV 62

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
                  A++SL M A  QY +G Y+ AA   + Y+  YP+ K  +   Y VG S     
Sbjct: 63  VQKGTENAQESLYMLAMAQYKSGDYESAAQAFKRYVQSYPKGKYAELASYYVGESLFMCT 122

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG- 204
            +   DQ  T   +      ++ + ++     A+  +   +++L  KE+   + Y   G 
Sbjct: 123 PEPRLDQSQTVSAIASFQEFLDLFPDAKLKNSAQNRLFELQDKLVKKELYSAQLYYDLGP 182

Query: 205 ----------EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL----------MD 244
                      Y A I   +  L +Y  +   E     ++++   LA             
Sbjct: 183 YFGNCTSGGNNYEACIITAENALKDYPYSSLRENFAVLVMKSKFELAEQSVEEKRLERYQ 242

Query: 245 EAREVVSLIQERYPQGYWARYVETLVK 271
           +A +        YP        E  +K
Sbjct: 243 DAEDECYGFINEYPDSKQRPLAEKFIK 269


>gi|332519650|ref|ZP_08396114.1| outer membrane assembly lipoprotein YfiO [Lacinutrix algicola
           5H-3-7-4]
 gi|332044209|gb|EGI80403.1| outer membrane assembly lipoprotein YfiO [Lacinutrix algicola
           5H-3-7-4]
          Length = 267

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 43/181 (23%), Positives = 71/181 (39%), Gaps = 1/181 (0%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y   V   +E  +SKA   F      +     A K + ++A   Y    Y  +    E +
Sbjct: 33  YRMGVKKYEEGKYSKANRIFEMIIPQYRGKPQAEKLMFLNADALYQMEDYYVSGYHFERF 92

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP-YVKGAR 179
           I+ YP+S+ +    +    SY ++      DQ  T   LQ +   +  Y  S   V  A 
Sbjct: 93  ISSYPKSEKLAEASFKSAKSYYELSPVYSKDQTETITALQKLQEFINLYPESEAEVAQAN 152

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             V     +L  K  EI + Y K  +Y A+I  F   ++++      EEA+    ++   
Sbjct: 153 EMVKELDYKLEKKAFEIAKQYNKISDYKASIASFDDFISDFPGTSLREEALYIRFDSAYK 212

Query: 240 L 240
           L
Sbjct: 213 L 213


>gi|120435007|ref|YP_860693.1| hypothetical protein GFO_0648 [Gramella forsetii KT0803]
 gi|117577157|emb|CAL65626.1| conserved hypothetical protein [Gramella forsetii KT0803]
          Length = 279

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 92/260 (35%), Gaps = 13/260 (5%)

Query: 13  EAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN 72
           + +   + K  L +   +       +++    +      T      ++Y +       + 
Sbjct: 5   QMFLRIMKKGILVLGLLMVTLSCSEYQKLLKNEETAPKYT---AAEQLYNEGKEEDSNKK 61

Query: 73  FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
             KA +   Q   ++       + + + A   Y  G Y  A    + ++  YP+S+  + 
Sbjct: 62  LRKALKLLEQIEPEYRGKPQGERIVFILADTYYQLGDYFNAPFQFDRFLQLYPKSQKAEE 121

Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
             Y    SY         DQ  T   ++ +   +  Y    + + A    T    +L  K
Sbjct: 122 AGYKSASSYFYRSPKYNLDQTDTHKAIEELQVYLNTYPEGEFNEEANKMATELLVKLEKK 181

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM--------- 243
           + EI + Y     Y AAI  F   +A++  +   E A     ++   LA+          
Sbjct: 182 DYEIAKQYHHTEYYKAAIASFNNFIADHPGSPFREAAYFYRFDSAYRLAINSFEVLMEER 241

Query: 244 -DEAREVVSLIQERYPQGYW 262
            +EARE     ++ YP+G +
Sbjct: 242 LNEAREFYKSYKKYYPEGEY 261



 Score = 44.0 bits (103), Expect = 0.021,   Method: Composition-based stats.
 Identities = 18/150 (12%), Positives = 38/150 (25%), Gaps = 26/150 (17%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS--------------LLMSAFVQYS 106
           Y      L + +  KA E        +P      ++                  A   + 
Sbjct: 132 YRSPKYNLDQTDTHKAIEELQVYLNTYPEGEFNEEANKMATELLVKLEKKDYEIAKQYHH 191

Query: 107 AGKYQQAASLGEEYITQYPESK--NVDYVY-----YLVGMSYAQMIRDVPYDQRATKLML 159
              Y+ A +    +I  +P S      Y Y     Y + ++  +        +       
Sbjct: 192 TEYYKAAIASFNNFIADHPGSPFREAAYFYRFDSAYRLAINSFE-----VLMEERLNEAR 246

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
           ++     + Y    Y       ++     L
Sbjct: 247 EFYKSYKKYYPEGEYTPQLEDALSEIDKSL 276


>gi|218960399|ref|YP_001740174.1| hypothetical protein; putative signal peptide [Candidatus
           Cloacamonas acidaminovorans]
 gi|167729056|emb|CAO79967.1| hypothetical protein; putative signal peptide [Candidatus
           Cloacamonas acidaminovorans]
          Length = 244

 Score =  111 bits (279), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 98/239 (41%), Gaps = 12/239 (5%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC--SR 85
             + +  +      SS    L +   ++   E++ K       + +S+A   + +    R
Sbjct: 5   IFLLLITVFCLVSCSSNKTQLSTEAKLKNADELFAK-------KKYSRAAVIYEEISFER 57

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
                  A    +  A   ++  K+  A +  +++I  +P+ +NV   Y+ +G+   +  
Sbjct: 58  KSAATAYAT---MKVADCYFNMNKFSDARAKYQQFINSFPDHENVADAYFRIGVCLFEES 114

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
               YDQ  T   ++     ++RY N P    A  Y+   + +L  K+   G  Y K  +
Sbjct: 115 LPPQYDQTETIKCIEAFQTFIDRYPNDPRYVQAVDYIHKCQYKLLEKQYLTGYIYYKMKD 174

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
           Y +A+  F  +++  ++ E   +++    + ++     D+A+     ++ RYP    A+
Sbjct: 175 YSSALMYFDEIVSLGNNDELDRQSLYYSAKLHLHQKNYDKAKASYERLKNRYPDSKEAK 233



 Score = 35.9 bits (82), Expect = 7.0,   Method: Composition-based stats.
 Identities = 15/125 (12%), Positives = 30/125 (24%), Gaps = 22/125 (17%)

Query: 75  KAYEYFNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEY 120
           K  E F      +P      ++                ++ ++ Y    Y  A    +E 
Sbjct: 126 KCIEAFQTFIDRYPNDPRYVQAVDYIHKCQYKLLEKQYLTGYIYYKMKDYSSALMYFDEI 185

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           ++     +      Y     +          Q+          R+  RY +S   K    
Sbjct: 186 VSLGNNDELDRQSLYYSAKLHLH--------QKNYDKAKASYERLKNRYPDSKEAKSLTK 237

Query: 181 YVTVG 185
                
Sbjct: 238 KFAKL 242


>gi|91216488|ref|ZP_01253454.1| lipoprotein protein, putative [Psychroflexus torquis ATCC 700755]
 gi|91185282|gb|EAS71659.1| lipoprotein protein, putative [Psychroflexus torquis ATCC 700755]
          Length = 272

 Score =  111 bits (279), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 77/219 (35%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            +   + V                +        + +Y+K +   K + ++KA   F Q  
Sbjct: 4   IVLLLLVVISFSSCSEYQKVLKKDEIALKYEMAKSMYDKGLEKGKGKYYTKAIRLFEQIL 63

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
             +           M+A   Y  G Y  +  L E +   YP S   +  +Y   +SY ++
Sbjct: 64  PQYKGKPSGETVSYMNANSHYLLGDYFLSGYLFERFSKSYPNSVKAEEAHYKSAVSYYEV 123

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
                 DQ  T+  +  +   +  Y +  + + +   +    +++  K  EI + Y    
Sbjct: 124 SPIYSKDQEDTQTAMTKLQFYINTYPDGEFFEESNSKIQELSSKIEKKYYEISKQYHHTE 183

Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
            Y +AI  F   +  +   +  E+A     E+   LA+ 
Sbjct: 184 RYKSAIESFDNYILKFPGTKFREQAFFYKFESAYILAIN 222


>gi|213961696|ref|ZP_03389962.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga sputigena
           Capno]
 gi|213955485|gb|EEB66801.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga sputigena
           Capno]
          Length = 268

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 51/220 (23%), Positives = 82/220 (37%), Gaps = 10/220 (4%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +A    K + + KA   F Q + ++       +   M     Y   +Y  A+   E  
Sbjct: 35  YIEAEKLYKAKKYKKANRLFEQIASEYAGKPQGERIYYMYGDACYQLKQYSLASYQFERL 94

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
              YP S+      +L   S          DQ  T   L+ +   ++RY NS Y K A  
Sbjct: 95  QKLYPRSEKATEASFLEAKSLYLETPKYSVDQTYTYQALEKLQYFLDRYPNSEYTKEANE 154

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA-RLVEAYV- 238
                  +L  K+ EI + Y K  +Y AA+      L N   +   EEA+  RL  AY  
Sbjct: 155 LTLDLVTRLEKKDFEIAKQYDKIRDYQAAMKSLDNFLTNNPGSPFREEALYTRLHSAYEW 214

Query: 239 --------ALALMDEAREVVSLIQERYPQGYWARYVETLV 270
                       ++ A+E    +   YP+  + +  E ++
Sbjct: 215 AINSVESKKEERLNTAKEAYDNLLRAYPESKFKKEAENML 254



 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 36/131 (27%), Gaps = 16/131 (12%)

Query: 75  KAYEYFNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEY 120
           +A E        +P +   +++                  A        YQ A    + +
Sbjct: 131 QALEKLQYFLDRYPNSEYTKEANELTLDLVTRLEKKDFEIAKQYDKIRDYQAAMKSLDNF 190

Query: 121 ITQYPESKNVDYVYYLVGMSYAQ-MIRDVP-YDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           +T  P S   +   Y    S  +  I  V    +       +    ++  Y  S + K A
Sbjct: 191 LTNNPGSPFREEALYTRLHSAYEWAINSVESKKEERLNTAKEAYDNLLRAYPESKFKKEA 250

Query: 179 RFYVTVGRNQL 189
              +      L
Sbjct: 251 ENMLAKINTSL 261


>gi|325103099|ref|YP_004272753.1| outer membrane assembly lipoprotein YfiO [Pedobacter saltans DSM
           12145]
 gi|324971947|gb|ADY50931.1| outer membrane assembly lipoprotein YfiO [Pedobacter saltans DSM
           12145]
          Length = 289

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 81/219 (36%), Gaps = 10/219 (4%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y++A+    +++++KA   F+   + +     A       A+  Y    Y  A    + +
Sbjct: 40  YQEAIKLYNKKDYTKALSLFDDLVQRYRGRSEAEDLYYYYAYTNYKLKDYISARYHFKTF 99

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
              YP S   +   ++              DQ  T   ++     +  Y  S  V  A  
Sbjct: 100 ADTYPSSPKAEECRFMTAYCMYLESPVYSLDQDNTYKAIESFQLFINLYPQSDRVAEASK 159

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE-------EAMARL 233
            +   R++L  K     + +L  G+Y AA+  F+  + ++ D ++AE       EA    
Sbjct: 160 LIESLRDKLEQKSFANAKLFLDIGDYQAAVIAFRNSIKDFPDTKYAEQIDYLTIEAQYLY 219

Query: 234 VEAYVALALMDEAREVVSLIQ---ERYPQGYWARYVETL 269
            +    +   +  +E +       ERYP   +++    L
Sbjct: 220 AKNSREIKQEERYQEAIDEYDRFMERYPNSKYSKDANKL 258


>gi|312891339|ref|ZP_07750857.1| outer membrane assembly lipoprotein YfiO [Mucilaginibacter paludis
           DSM 18603]
 gi|311296200|gb|EFQ73351.1| outer membrane assembly lipoprotein YfiO [Mucilaginibacter paludis
           DSM 18603]
          Length = 306

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 81/221 (36%), Gaps = 10/221 (4%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y + + +  ++++++A + F    + +     A       A+  Y    Y  A    + +
Sbjct: 40  YHEGIKYYNKKDYTRALDLFEDLVQRYRGTTEAEDLYYYYAYTNYKLKDYTSARYHFKTF 99

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
              YP S   +   ++    Y     +   DQ  T+  +  M   +  Y  S     A  
Sbjct: 100 ADSYPNSSRTEECRFMSAYCYYLDSPNFSLDQENTQKAIDAMQLFINLYPKSDRAPEAGK 159

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE-------AMARL 233
            +   R++L  K     + YL  G+Y +A+  F   L +Y D ++AEE       A    
Sbjct: 160 LIQNLRDKLEEKSYANAKLYLTIGDYQSAVIAFGNSLRDYPDIKYAEEMEFLTIKAQYLY 219

Query: 234 VEAYVALALMDEAREVVS---LIQERYPQGYWARYVETLVK 271
            +    +   +     ++      E+YP   + +  E L K
Sbjct: 220 AKNSYEIKQQERYESAIAFHDQFVEKYPNSKYLKDAELLKK 260


>gi|255534236|ref|YP_003094607.1| lipoprotein protein, putative [Flavobacteriaceae bacterium 3519-10]
 gi|255340432|gb|ACU06545.1| lipoprotein protein, putative [Flavobacteriaceae bacterium 3519-10]
          Length = 324

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 84/226 (37%), Gaps = 11/226 (4%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           + Y   L  FF+++ C           +   D       +  + + A    + + ++ A 
Sbjct: 2   KKYLIVLLAFFALSAC-----------NRQQDLAMKSADKDYILKVANENFENKKWTDAL 50

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
             + + S        A   +  SA+  Y    Y+ A    + +   +P+    +   Y+ 
Sbjct: 51  ALYERLSNLVAGTDDAPNVVYNSAYANYYDKNYKLAGHQFKNFSVTFPQDPRAEDAAYMS 110

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
            + + +   D   DQ +T+L +  +   +  Y NS   K     +     +L  K  E  
Sbjct: 111 ALCFYEGSMDYNLDQTSTELAINELQNFLNNYPNSEKSKNINELIDELTYKLEFKAYENA 170

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
           R Y K  +Y AA   F+ VL ++   + + +    ++ +   LA+ 
Sbjct: 171 RQYFKMADYKAANVAFENVLYDFPSTKLSPKINEYILRSKYELAVN 216


>gi|325288190|ref|YP_004263980.1| outer membrane assembly lipoprotein YfiO [Cellulophaga lytica DSM
           7489]
 gi|324323644|gb|ADY31109.1| outer membrane assembly lipoprotein YfiO [Cellulophaga lytica DSM
           7489]
          Length = 270

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 47/225 (20%), Positives = 85/225 (37%), Gaps = 16/225 (7%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YE A  F  E +F +A     Q +  +       + +   A   Y  G+Y  A    E +
Sbjct: 33  YEMAEKFYDEGDFKRANRLLEQIASKYIGKPQGERVMFFFANSYYQIGQYNDAGYQFERF 92

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +  YP S+ +    +L   SY+ + R    DQ  T   L  +   +  Y +S Y+  A  
Sbjct: 93  VKAYPRSEKMQEASFLGAKSYSYLSRKYSLDQTDTDKALLKIQNFINTYPDSEYLPEANE 152

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEY------VAAIPRFQLVLANYSDAEHAEEAMARLV 234
                  +   K +EI + + K GE+      ++AI   +  + +     + EEA+    
Sbjct: 153 IAASLTRKKEKKALEIAKQFTKLGEFYDLEYSISAIKALENFMLDNPGTIYKEEALYYKT 212

Query: 235 EAYVALALM----------DEAREVVSLIQERYPQGYWARYVETL 269
            A   LA+             A E    + + +P+  +A+    +
Sbjct: 213 LAAYNLAINSHPNKKEERLKNANEAYGKLIKTFPETEFAKKANNM 257


>gi|189219588|ref|YP_001940229.1| TPR repeats containing protein [Methylacidiphilum infernorum V4]
 gi|189186446|gb|ACD83631.1| TPR repeats containing protein [Methylacidiphilum infernorum V4]
          Length = 350

 Score =  109 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 61/154 (39%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A + F    R  P+   A  +            KY  A +     I +YP     D   Y
Sbjct: 157 AAQIFESIIRAAPYGRFAPLAEFQLGLTYIKEKKYTDAIATFNRLIDKYPNHSLADDAQY 216

Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
            +G ++ Q  +   YDQ +T+  ++     + RY +   V+ A+ ++   +++       
Sbjct: 217 EIGYTWYQASQASEYDQSSTEKAIEGFEDYIVRYPSGDKVEAAKAHIAELKSKSTLGSFH 276

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
           I ++Y +   + AA   +  V+     ++ A+ A
Sbjct: 277 IAQFYERAKNFKAAYIYYSDVIKQNPTSDQAKIA 310



 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 63/198 (31%), Gaps = 30/198 (15%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
             A  F + +++  A + +    R +P+A  A ++           G +  A    +  I
Sbjct: 55  NLAKKFEEAKDYENALKAYRILIRKWPYAVFAPEAQFRIGQCLEKKGDFLGANKAYDRMI 114

Query: 122 TQYPESKNVDYV---------YYLVG--MSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
            +YP S   +            YL G       +      D     +  Q    I+    
Sbjct: 115 QKYPSSSFFEQALERKLAIGNLYLAGEPKRLFNIPMGSGLD-----IAAQIFESIIRAAP 169

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
              +   A              E ++G  Y+K  +Y  AI  F  ++  Y +   A++A 
Sbjct: 170 YGRFAPLA--------------EFQLGLTYIKEKKYTDAIATFNRLIDKYPNHSLADDAQ 215

Query: 231 ARLVEAYVALALMDEARE 248
             +   +   +   E  +
Sbjct: 216 YEIGYTWYQASQASEYDQ 233



 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 54/146 (36%), Gaps = 16/146 (10%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY---SAGKYQQ----- 112
           ++  + ++KE+ ++ A   FN+    +P   +A  +     +  Y    A +Y Q     
Sbjct: 179 FQLGLTYIKEKKYTDAIATFNRLIDKYPNHSLADDAQYEIGYTWYQASQASEYDQSSTEK 238

Query: 113 AASLGEEYITQYPESKNVDYVYYLVG-------MSYAQMIRDVPYDQRATKLMLQYMSRI 165
           A    E+YI +YP    V+     +        +    + +      +  K    Y S +
Sbjct: 239 AIEGFEDYIVRYPSGDKVEAAKAHIAELKSKSTLGSFHIAQFYER-AKNFKAAYIYYSDV 297

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAA 191
           +++   S   K A+  +      +A 
Sbjct: 298 IKQNPTSDQAKIAQQKIVQLHPLVAK 323


>gi|163756996|ref|ZP_02164102.1| lipoprotein protein, putative [Kordia algicida OT-1]
 gi|161323000|gb|EDP94343.1| lipoprotein protein, putative [Kordia algicida OT-1]
          Length = 264

 Score =  109 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 91/262 (34%), Gaps = 20/262 (7%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + KF   +  +I       +++    +               YE A    KE  F K+  
Sbjct: 1   MPKFLYLVLIAITFASCSEYQKALKSEDTKVK----------YELAERLYKEGKFKKSSR 50

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            F Q    +       +   + A   +   ++  +    E ++  YP+S ++    +   
Sbjct: 51  LFEQIVPRYRGKPQGERVTFLYARSLFEIEQFIVSGYQFERFVRSYPKSDSIQSAAFYEA 110

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
            SY         DQR T   +  +   +  Y +S Y+  A   V     ++  K  EI +
Sbjct: 111 KSYYMESPRYSIDQRETIKAINKLQSFINNYPDSKYLDNANVMVDELTTKIEKKAYEIAK 170

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL----------ALMDEARE 248
            Y    +Y ++I   +  L++Y      E+AM   ++A   L             +EA  
Sbjct: 171 QYNTISDYKSSIKAVENFLSDYPGTSFREDAMFLKLDAMYNLATKSFASLMEGRYNEAAS 230

Query: 249 VVSLIQERYPQGYWARYVETLV 270
               + + YP+  +    + ++
Sbjct: 231 AYKTLVKFYPESKYREEADKIM 252



 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/165 (13%), Positives = 47/165 (28%), Gaps = 23/165 (13%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFS-------KAYEYFNQCSRDFPFAGVARKSLLM--- 99
             +D       YE    +++   +S       KA         ++P +     + +M   
Sbjct: 97  PKSDSIQSAAFYEAKSYYMESPRYSIDQRETIKAINKLQSFINNYPDSKYLDNANVMVDE 156

Query: 100 -----------SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV--GMSYAQMIR 146
                       A    +   Y+ +    E +++ YP +   +   +L    M       
Sbjct: 157 LTTKIEKKAYEIAKQYNTISDYKSSIKAVENFLSDYPGTSFREDAMFLKLDAMYNLATKS 216

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
                +            +V+ Y  S Y + A   +     +LA 
Sbjct: 217 FASLMEGRYNEAASAYKTLVKFYPESKYREEADKIMASITEELAK 261


>gi|220933427|ref|YP_002512326.1| outer membrane assembly lipoprotein YfiO [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219994737|gb|ACL71339.1| outer membrane assembly lipoprotein YfiO [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 239

 Score =  109 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 51/239 (21%), Positives = 92/239 (38%), Gaps = 14/239 (5%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
              +A   L G   Q  R    D+          Y   V  +   + + A +        
Sbjct: 1   MVLLASVLLAGCATQGVRPADDDTAA--------YRAVVEAVSASDCAAARQALQVMQAQ 52

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
            P +     + + +A+   S G+  +A  L   ++ Q+P   + +Y  YL  +      +
Sbjct: 53  HPNSPRLPDARIETAYACLSGGELAEAEELVITFLEQHPGHPSEEYGRYLHALVAYARWK 112

Query: 147 DVPYDQRATKLMLQYMSR------IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
           ++P D  + ++  Q          +V +Y  + Y    R  +T  R  LA  E+E     
Sbjct: 113 ELPPDTPSVRVAAQARQTFGRIRVLVSQYPETAYASDLRMMLTDLREGLARVELETIATD 172

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           L+ G + A I R   VL +Y+  E A  A+A L+ A+ A      AR  +  ++  +P 
Sbjct: 173 LQAGRHQAVISRANYVLNHYAATESAPFALAALINAHRARGEEAAARTHLYRLESDWPD 231


>gi|282879577|ref|ZP_06288308.1| outer membrane assembly lipoprotein YfiO [Prevotella timonensis
           CRIS 5C-B1]
 gi|281306525|gb|EFA98554.1| outer membrane assembly lipoprotein YfiO [Prevotella timonensis
           CRIS 5C-B1]
          Length = 297

 Score =  109 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 42/232 (18%), Positives = 79/232 (34%), Gaps = 21/232 (9%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YE A        +++A    N           A++SL M A  QY  G Y+ A+   + Y
Sbjct: 35  YEYAKECFVNGKYTRAITLLNDLIVVQKGTDHAQESLYMLAMAQYKTGDYESASQAFKRY 94

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +  YP+ +  +   Y +G S      +   DQ  T   +      ++ +  +     A+ 
Sbjct: 95  MQSYPKGQYAELASYYIGESLYMSTPEPRLDQSQTVSAIAAFQEFLDLFPEAHLKNQAQK 154

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRG-----------EYVAAIPRFQLVLANYSDAEHAEEA 229
            +   +++L  KE+   + Y   G            Y A I   +  L +Y  +   E  
Sbjct: 155 RLFELQDKLVKKELYSAQLYYDLGSYFGNCTSGGNNYEACIITAENALKDYPYSSMRENF 214

Query: 230 MARLVEAYVALAL----------MDEAREVVSLIQERYPQGYWARYVETLVK 271
              ++++   LA             +A +        YP        E  ++
Sbjct: 215 AVLIMKSKFELAEQSVESKRLERYQDAEDECYGFINEYPDSKERSTAEKYIR 266


>gi|121730331|ref|ZP_01682694.1| hypothetical protein VCV52_0672 [Vibrio cholerae V52]
 gi|121627913|gb|EAX60489.1| hypothetical protein VCV52_0672 [Vibrio cholerae V52]
          Length = 102

 Score =  109 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 29/94 (30%), Gaps = 7/94 (7%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
            G    SS DV  D         ++Y +A   L+   +  A E        +PF   + +
Sbjct: 16  FGCS--SSPDVVPDVPP-----SQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQ 68

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
             L   +  Y         +  E +    P  + 
Sbjct: 69  VQLDLIYAYYKNDDLALGLATIERFTRLNPTHEK 102


>gi|255531053|ref|YP_003091425.1| outer membrane assembly lipoprotein YfiO [Pedobacter heparinus DSM
           2366]
 gi|255344037|gb|ACU03363.1| outer membrane assembly lipoprotein YfiO [Pedobacter heparinus DSM
           2366]
          Length = 309

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 54/266 (20%), Positives = 93/266 (34%), Gaps = 21/266 (7%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           K  L + F+I    + G + Q  +    + V         Y++A+    ++N++KA   F
Sbjct: 5   KHVLLLSFTIIALTIAGCKSQFEKIRLSNDVAKK------YQEAMRLYNKKNYAKALILF 58

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
              S+ +     A +     A   Y    Y  A    + +   YP SK  +   Y+    
Sbjct: 59  EDLSQKYRGRAEAEELNYHYALTLYKLKDYTTARYQFKSFADTYPTSKYAEECRYMGAYC 118

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
           Y         DQ  T   +  +   +  Y  S     A  Y+ + R +L  K     R Y
Sbjct: 119 YYLDSPAPSLDQENTYKAIDALQLFINFYPKSERAADAAKYIGLLRAKLEDKAYNNARLY 178

Query: 201 LKRG-----EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM----------DE 245
              G      Y AA+   +    ++ D ++AEE    ++++  A A            +E
Sbjct: 179 YDLGGYDVSNYKAAVIALKNAQIDFPDIKYAEEMDFLIIKSQFAYAKNSLETRQEDRYNE 238

Query: 246 AREVVSLIQERYPQGYWARYVETLVK 271
           A        E +PQ       + L K
Sbjct: 239 AITYADEFVEAHPQSKLLEDAKALKK 264


>gi|256425917|ref|YP_003126570.1| outer membrane assembly lipoprotein YfiO [Chitinophaga pinensis DSM
           2588]
 gi|256040825|gb|ACU64369.1| outer membrane assembly lipoprotein YfiO [Chitinophaga pinensis DSM
           2588]
          Length = 302

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 43/222 (19%), Positives = 78/222 (35%), Gaps = 8/222 (3%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSR-DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           + K  L I   +A    V    +  R +   D    + Y  ++Y K       + +  A 
Sbjct: 1   MRKLVLYICLFVAATAAVSCNTELRRIEKSKDYEAKLAYADKLYAK-------KKYMTAQ 53

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
             +    + +              +  Y    Y QA    + Y+  +P S     + Y+ 
Sbjct: 54  TLYESLFQVYKGTDKYEPMYYNYCYCSYKMKDYVQAGFYFKNYLDNFPNSPRATEMDYMQ 113

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
              Y +    V  DQ  T+  +  M   +  Y  S  V  A   + + R +L  KE    
Sbjct: 114 AYCYYKQSPKVALDQTNTQKAIAAMQTFINNYPTSDKVPEANLVIELSRRKLEKKEYNNA 173

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             Y   G Y AA   F+ ++ N+ D++ ++      ++AY  
Sbjct: 174 ELYYNLGHYQAAAITFKSLMRNFPDSDKSDSYKYMAIKAYYN 215



 Score = 35.9 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 38/112 (33%), Gaps = 12/112 (10%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY--------- 105
           + +++ Y  A L+    ++  A   F    R+FP +  +     M+    Y         
Sbjct: 164 KLEKKEYNNAELYYNLGHYQAAAITFKSLMRNFPDSDKSDSYKYMAIKAYYNYAKNSVWE 223

Query: 106 -SAGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRA 154
               +Y+   S   ++   Y  SK       YY +  S  + I       R+
Sbjct: 224 KQKERYEDVLSEYLDFADHYNASKLKGDAEKYYTLAQSNIKTIDSYNKPDRS 275


>gi|300775415|ref|ZP_07085277.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
 gi|300506155|gb|EFK37291.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
          Length = 331

 Score =  108 bits (271), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 93/262 (35%), Gaps = 19/262 (7%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K+ L +F    V   V  + ++ R    D +            A     ++ +  A  
Sbjct: 1   MKKYILGLFAVAVVTSCVSQQERAMRSADKDFILK---------AANENFAKKKWKNALA 51

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            +++ +               +A+  Y    Y+ A    + +   +P+    +   Y+  
Sbjct: 52  LYDRLANLVAGTDDFPNVGFNTAYANYYDKSYKLAGHQFKNFAVSFPKDPRAEEAAYMSA 111

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           + Y +   D   DQ +T+L +  +   +  Y NS   K     +     +L  K  E  R
Sbjct: 112 LCYYEGSMDYNLDQSSTELAINELQDFLNNYPNSERSKNISQLIDELSYKLEFKAYENAR 171

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM----------DEARE 248
            Y K GEY AA   F  VL ++   +   +    ++++   LA+           + A  
Sbjct: 172 QYYKMGEYKAANVAFDNVLEDFPSTKLRSKIYDYIMKSRYELAMKSVYNLKEERIESALT 231

Query: 249 VVSLIQERYPQGYWARYVETLV 270
              L+++  P   +++    L 
Sbjct: 232 YTKLVEKELPDTEYSKTAVDLR 253


>gi|146301211|ref|YP_001195802.1| DNA uptake lipoprotein-like protein [Flavobacterium johnsoniae
           UW101]
 gi|146155629|gb|ABQ06483.1| DNA uptake lipoprotein-like protein [Flavobacterium johnsoniae
           UW101]
          Length = 264

 Score =  108 bits (270), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 44/225 (19%), Positives = 84/225 (37%), Gaps = 10/225 (4%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K    +  +   C    +++    +               +E A        ++KA  
Sbjct: 1   MKKIVSLLIVAALFCSCSEYQKALKNEDVAAK----------FEVATKMYDAGKYNKAIR 50

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            F Q +  +     A K   M +   Y   +Y  A    E +++ YP S+ V    +L  
Sbjct: 51  LFEQLAPTYRGKPQAEKLFYMFSQSYYKTKQYYLAGYQFESFVSGYPRSEKVQEAAFLGA 110

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
            SY+++      DQ  T   L  +   ++ Y NS Y+  A   V +   +L  K  E  +
Sbjct: 111 YSYSKLAPVYSLDQADTVKALDKLQAFIDNYPNSEYLAQANESVKILNGKLEKKAYENAK 170

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
            Y    +Y +A+  F   +A++      E+A+    ++   LA+ 
Sbjct: 171 GYNTISDYKSALVAFDNFIADFPGTPLKEDALFYKYDSAYQLAIN 215



 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 8/80 (10%)

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAREVVSL---- 252
           Y K  +Y  A  +F+  ++ Y  +E  +EA      +Y  LA    +D+A  V +L    
Sbjct: 76  YYKTKQYYLAGYQFESFVSGYPRSEKVQEAAFLGAYSYSKLAPVYSLDQADTVKALDKLQ 135

Query: 253 -IQERYPQGYWARYVETLVK 271
              + YP   +       VK
Sbjct: 136 AFIDNYPNSEYLAQANESVK 155


>gi|294056473|ref|YP_003550131.1| Tetratricopeptide TPR_2 repeat protein [Coraliomargarita
           akajimensis DSM 45221]
 gi|293615806|gb|ADE55961.1| Tetratricopeptide TPR_2 repeat protein [Coraliomargarita
           akajimensis DSM 45221]
          Length = 342

 Score =  108 bits (270), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 69/164 (42%), Gaps = 1/164 (0%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           + + ++ + F     + P++  +  +L+  A V       + A    +  I  YP+S   
Sbjct: 156 KQYGESIKQFEGVISNAPYSDYSPLALMDIALVAEKRNDDEVAIDALDRLINFYPQSMLA 215

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
              YY +  +Y  ++++  YDQ +T+  + Y    +  +  S  V      +    N LA
Sbjct: 216 PDAYYTLAKTYGGLVQNAEYDQGSTRQAISYYEDYLVLFPESQSVGEVEANLKKMENLLA 275

Query: 191 AKEVEIGRYYL-KRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
           +  + +G +Y   R    AA+  +   +    D+E A EA  R+
Sbjct: 276 SSRLLLGDFYYFHRSNNTAALVFYNETITIAPDSEAAAEAQNRI 319



 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/222 (13%), Positives = 71/222 (31%), Gaps = 21/222 (9%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
           F      +  + + + S  +      +  K +      ++  A + F +  +++P    A
Sbjct: 30  FGSSVSEEDLQPIRVASPEEEVAADRILNKGLSKFSAGSYGGADKQFKKVVKNYPTTESA 89

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY---VYYLVGMSYAQ----MIR 146
            ++L M   V     +Y +A    +  +  YP  K+ +      +    +  +     I 
Sbjct: 90  AEALYMRGRVYMEKKRYVKAYKFLQSTVDTYPNYKDFNRVIGAQFECATALMEGARGRIF 149

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
            +    +     ++    ++     S Y   A               ++I     KR + 
Sbjct: 150 GIIPGFKQYGESIKQFEGVISNAPYSDYSPLAL--------------MDIALVAEKRNDD 195

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
             AI     ++  Y  +  A +A   L + Y  L    E  +
Sbjct: 196 EVAIDALDRLINFYPQSMLAPDAYYTLAKTYGGLVQNAEYDQ 237



 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 68/188 (36%), Gaps = 23/188 (12%)

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
           P   VA   +L     ++SAG Y  A    ++ +  YP +++     Y+ G  Y +  R 
Sbjct: 47  PEEEVAADRILNKGLSKFSAGSYGGADKQFKKVVKNYPTTESAAEALYMRGRVYMEKKRY 106

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKG--------ARFYVTVGRNQLAAKEVEIGRY 199
           V           +++   V+ Y N              A   +   R ++      I  +
Sbjct: 107 V--------KAYKFLQSTVDTYPNYKDFNRVIGAQFECATALMEGARGRIFG---IIPGF 155

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
                +Y  +I +F+ V++N   ++++  A+  +          + A + +  +   YPQ
Sbjct: 156 ----KQYGESIKQFEGVISNAPYSDYSPLALMDIALVAEKRNDDEVAIDALDRLINFYPQ 211

Query: 260 GYWARYVE 267
              A    
Sbjct: 212 SMLAPDAY 219



 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 15/164 (9%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G   +    V  ++         + + A++  K  +   A +  ++    +P + +A  +
Sbjct: 159 GESIKQFEGVISNAPYSDYSPLALMDIALVAEKRNDDEVAIDALDRLINFYPQSMLAPDA 218

Query: 97  LLMSAFVQ--------YSAGKYQQAASLGEEYITQYPESKNVDYV-------YYLVGMSY 141
               A           Y  G  +QA S  E+Y+  +PES++V  V         L+  S 
Sbjct: 219 YYTLAKTYGGLVQNAEYDQGSTRQAISYYEDYLVLFPESQSVGEVEANLKKMENLLASSR 278

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
             +     + +      L + +  +    +S     A+  +   
Sbjct: 279 LLLGDFYYFHRSNNTAALVFYNETITIAPDSEAAAEAQNRINDI 322


>gi|255038956|ref|YP_003089577.1| outer membrane assembly lipoprotein YfiO [Dyadobacter fermentans
           DSM 18053]
 gi|254951712|gb|ACT96412.1| outer membrane assembly lipoprotein YfiO [Dyadobacter fermentans
           DSM 18053]
          Length = 320

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 99/258 (38%), Gaps = 22/258 (8%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
              IA+  +    + S        +      ++ Y+ A+ + K+ ++ +A   F +    
Sbjct: 24  LLFIAILVVTSCSKFS-------KLQKTGTDQQKYDAAMAYYKKADYYRAGLLFEELIPL 76

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
              +  +  +    A+ QY  G+Y  +  L +++   Y  S       Y+   S  +   
Sbjct: 77  LKGSTESELAQFYYAYTQYHQGQYNTSQFLFKKFYDTYARSDYAQEALYMHAFSLYKDSS 136

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
               DQ +T   +  M   +  Y +SP+ +    Y+   R++L  K  E  R Y K  ++
Sbjct: 137 PYNLDQSSTFTAISAMQDFINAYPDSPFREECTRYILELRSKLEKKAYERARLYHKISDF 196

Query: 207 -----VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA----LMDEAREVVSL----- 252
                 +A+   +    ++ D+++ EE     VE+   LA    +  +      +     
Sbjct: 197 NPMSLKSAVISIENFRKDFPDSQYNEELAFLKVESQYNLASNSFIDKQKERYQEVVKFYQ 256

Query: 253 -IQERYPQGYWARYVETL 269
            + ++YP G + R  E +
Sbjct: 257 ELVDKYPTGKYNRDAERM 274


>gi|58699370|ref|ZP_00374137.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58534111|gb|EAL58343.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of
           Drosophila ananassae]
          Length = 150

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 11/149 (7%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +YK  +T F  +   F   +     +            + E+YE+AV    ++ + +A  
Sbjct: 7   MYKTLITCFIFLICSFTQSYADDLEK-----------TETELYEEAVELFDQKKYKQAIR 55

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            F++    +PF+  A K+ L+S    Y+ G Y  AAS  ++YI  Y   +++ YVYYL  
Sbjct: 56  AFHKIEDLYPFSYWAMKAKLLSGVSHYNMGNYSSAASDMDDYIYVYSNGEDLPYVYYLRV 115

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           +SY   I  V   Q+     L+  +  + 
Sbjct: 116 LSYYMQINKVQLGQQTAYKTLELATEYIN 144


>gi|313203409|ref|YP_004042066.1| outer membrane assembly lipoprotein yfio [Paludibacter
           propionicigenes WB4]
 gi|312442725|gb|ADQ79081.1| outer membrane assembly lipoprotein YfiO [Paludibacter
           propionicigenes WB4]
          Length = 267

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 53/261 (20%), Positives = 92/261 (35%), Gaps = 22/261 (8%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
           + F  I V  L             D+          Y KAV +  + +F +A   F+  +
Sbjct: 5   SFFLLIVVLTLASCSDYQKLLKSDDAELK-------YNKAVEYFGKGDFMRATTLFDAVA 57

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
             +     +   L   A        Y  A+     Y+  +P  K V    Y++G  Y   
Sbjct: 58  TYYKGTERSEIVLNYLAKSYMGQKDYFSASEYYRTYVKTFPRGKFVIESKYMIGYCYYLD 117

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
             D   DQ  T   +      ++ Y  S  VK A   +    ++LA K     + Y   G
Sbjct: 118 SPDTRLDQADTYKAIAAFQEFIDIYPESELVKDATKLLDELNDKLAYKAYLSAKLYYNLG 177

Query: 205 EYV-----AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL----MDEAREVVSLIQE 255
            Y+     + +   Q  L NY   ++ E+ M  ++ +   LA+      +A    + I E
Sbjct: 178 NYMGNNYESCVIAAQNGLKNYPATKYREDFMLLILNSKYELAVQSFETRKADRYRNTIDE 237

Query: 256 ------RYPQGYWARYVETLV 270
                  YP G + + V+ ++
Sbjct: 238 CYNYINEYPAGKYRKQVDKIL 258


>gi|167754110|ref|ZP_02426237.1| hypothetical protein ALIPUT_02401 [Alistipes putredinis DSM 17216]
 gi|167658735|gb|EDS02865.1| hypothetical protein ALIPUT_02401 [Alistipes putredinis DSM 17216]
          Length = 271

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 50/256 (19%), Positives = 100/256 (39%), Gaps = 14/256 (5%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           ++    VCF +     +S    L S         +Y+ A+   + Q +SKA   F   + 
Sbjct: 6   LYVLCTVCFAILAAGCNSVQQVLKSG----RPDHMYQTALKHYQNQKWSKAAMLFEAAAP 61

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
            +           M+AF ++    Y+ A S+ +++  ++  S  ++    ++ +SY  + 
Sbjct: 62  YYSGTMQEDSIAFMTAFCKFKTRDYEVATSMLDDFRRKFGRSVFLEDAEGILALSYFYLA 121

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
                DQ  T   +  ++  +  Y NS      R    +   +L  K       Y K G 
Sbjct: 122 PGPTRDQTMTTQAIVAVNEYLAHYPNSSRSDEFREMDKILTQRLHDKTYLNAYTYYKIGR 181

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA----LMDEAREVVSLIQ------E 255
           Y +AI   +  L  Y  + H EE M  +V++   LA       +A   +S +        
Sbjct: 182 YKSAIVALKNALKLYPTSSHREEIMYLIVKSGSKLADNSVQDKQADRYLSTLDSYYSFVA 241

Query: 256 RYPQGYWARYVETLVK 271
            +P+ ++ + ++ L +
Sbjct: 242 EFPESHYLKELDRLAQ 257



 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 39/91 (42%), Gaps = 2/91 (2%)

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK--LM 158
           A+  Y  G+Y+ A    +  +  YP S + + + YL+  S +++  +   D++A +    
Sbjct: 173 AYTYYKIGRYKSAIVALKNALKLYPTSSHREEIMYLIVKSGSKLADNSVQDKQADRYLST 232

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
           L      V  +  S Y+K         ++ L
Sbjct: 233 LDSYYSFVAEFPESHYLKELDRLAQNAKDFL 263


>gi|282859702|ref|ZP_06268803.1| outer membrane assembly lipoprotein YfiO [Prevotella bivia
           JCVIHMP010]
 gi|282587513|gb|EFB92717.1| outer membrane assembly lipoprotein YfiO [Prevotella bivia
           JCVIHMP010]
          Length = 301

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 48/284 (16%), Positives = 95/284 (33%), Gaps = 29/284 (10%)

Query: 9   ICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL 68
           I IF      + K      F ++ C  + +   +     +   TD  Y+   YE A    
Sbjct: 18  ILIFAVQIVNMKK-----SFLLSFCVALLFSSCAHEYNAVYKSTDPEYK---YEFAKELF 69

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
            +  F  A     +           ++ L M A  +Y    Y+ A+    +Y   YP+  
Sbjct: 70  AKGKFGNAIPLLQELVTIQKGTENGQECLYMLAKAEYGMKDYEAASETFRKYYQSYPKGI 129

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
             +   + +G    +   +   DQ  T   +Q     ++ + +    + A+  +   +++
Sbjct: 130 YAEMAQFNIGQCLYESTPEPRLDQTPTIAAIQAYQDYLDLFPDGKMKEVAQNRMFELQDK 189

Query: 189 LAAKEVEIGRYYLKRG-----------EYVAAIPRFQLVLANYSDAEHAEE-AMARLVEA 236
           L  KE    + Y   G            Y A I   Q  + +Y  ++  E+ A+  +   
Sbjct: 190 LVKKEFLNAKLYYNLGSYFGNCTSGGNNYEACIITAQNAINDYPYSKLREDFAILIMKSK 249

Query: 237 YVALALMDEAREVVSL---------IQERYPQGYWARYVETLVK 271
           Y    +  E ++V               +YP     +  E  +K
Sbjct: 250 YELAQMSIEQKKVQRFQDAEDECYGFINQYPDSKERKTAEAYIK 293


>gi|225849252|ref|YP_002729416.1| DNA uptake lipoprotein [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644324|gb|ACN99374.1| DNA uptake lipoprotein [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 308

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 45/239 (18%), Positives = 82/239 (34%), Gaps = 22/239 (9%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN-QC 83
            +F  I   F+     +          T+V   +E   K +   ++ ++ KA E      
Sbjct: 4   IVFLGILSAFMFSCGSK----------TEVYVGQEKLSKGLTLYQKGDYKKAKEELKNAI 53

Query: 84  SRDFPFAGVARKSLLM-----SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            +    +     + LM      A   Y+  +Y  A    EE+I  +P S  +    Y + 
Sbjct: 54  FK----SEGLTPAQLMEARFALADSYYNREEYVDAIVEFEEFIALFPTSPKIPEALYKLA 109

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           MSY  +  D   D        +    I++ Y +S YV  A+  +       A   + I  
Sbjct: 110 MSYLFVSPDYKRDLTYVNKAEEKAQEIIDNYPDSKYVAAAKEIIKKVNEIKAKHTLYIAE 169

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA--YVALALMDEAREVVSLIQE 255
            Y K G+  +A   ++   + Y D    +  + +L             E  +    I+E
Sbjct: 170 TYEKYGKPYSAAVYYEEAYSKYKDYIQKDYVIYKLAYNLVNSQYQYTQEIEKYKKQIKE 228



 Score = 53.6 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 8/86 (9%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV--------ALALMDE 245
             +   Y  R EYV AI  F+  +A +  +    EA+ +L  +Y+         L  +++
Sbjct: 69  FALADSYYNREEYVDAIVEFEEFIALFPTSPKIPEALYKLAMSYLFVSPDYKRDLTYVNK 128

Query: 246 AREVVSLIQERYPQGYWARYVETLVK 271
           A E    I + YP   +    + ++K
Sbjct: 129 AEEKAQEIIDNYPDSKYVAAAKEIIK 154


>gi|213026854|ref|ZP_03341301.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 93

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 26/92 (28%), Positives = 43/92 (46%)

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NS Y   A   +   +++LA  E  +  YY  RG +VA + R + +L NY D +   +
Sbjct: 2   YPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATRD 61

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           A+  +  AY  + L  +A +V  +I       
Sbjct: 62  ALPLMENAYRQMQLNAQADKVAKIIAANSKNT 93


>gi|228469797|ref|ZP_04054755.1| putative lipoprotein protein [Porphyromonas uenonis 60-3]
 gi|228308636|gb|EEK17387.1| putative lipoprotein protein [Porphyromonas uenonis 60-3]
          Length = 271

 Score =  105 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 76/216 (35%), Gaps = 5/216 (2%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
            + +  L  W   +S       +   +     Y  A  +  E  +S+  E        + 
Sbjct: 6   LLRILVLSCWLLCTSSCAEYMRIQKSKDPTLRYSYAKKYYNEGKYSRVAELMVDVLPHYE 65

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
                 ++L + A       +   AA       ++YP+        Y  G++  ++  D 
Sbjct: 66  GTQEGAQALYIMADALLQNKQESSAAEYFRRLYSKYPQDARAAEARYKTGLALYRIAPDP 125

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG---- 204
             DQ  T   L+ +   +E Y  S + K     +   ++ LA KE+     Y   G    
Sbjct: 126 RLDQSITYSALKELQGFLEAYPQSEHRKEVEQMLFDLQDNLAKKELITADLYYNLGTYIG 185

Query: 205 -EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             Y++AI   +  L  Y   +H E+ +  +VEA   
Sbjct: 186 NNYISAIITARNALKAYPYTKHREDLLFIIVEASYQ 221


>gi|260063113|ref|YP_003196193.1| hypothetical protein RB2501_16029 [Robiginitalea biformata
           HTCC2501]
 gi|88784682|gb|EAR15852.1| conserved hypothetical lipoprotein [Robiginitalea biformata
           HTCC2501]
          Length = 280

 Score =  105 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 69/182 (37%), Gaps = 6/182 (3%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YE A    +E ++ KA     Q +  F       + +   A   +  G Y  A    E +
Sbjct: 37  YELAERLYQEGSYKKANRLLEQIAPQFVGKPQGERVMFFLADSYFQKGDYNFAGYQFERF 96

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +  YP+S       +L   SY  +      DQ  T   L  +   +  Y  S +++ A  
Sbjct: 97  LKSYPKSDKAPEAAFLGAKSYYMLSPRYSLDQTDTDKALNKLQVFINAYPESEFMEEANA 156

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEY------VAAIPRFQLVLANYSDAEHAEEAMARLV 234
                  +   K  EI R ++K G+Y      ++AI      ++++  + + EEA    +
Sbjct: 157 MAQELTRKKQKKAFEIARQFVKLGKYYTLDYNISAIAALDNFISDHPGSVYREEAYFLRL 216

Query: 235 EA 236
            A
Sbjct: 217 RA 218



 Score = 44.0 bits (103), Expect = 0.021,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 30/92 (32%), Gaps = 2/92 (2%)

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV--GMSYAQMIRDVPYDQRATKLMLQY 161
            Y+      A +  + +I+ +P S   +  Y+L     S           +      +  
Sbjct: 182 YYTLDYNISAIAALDNFISDHPGSVYREEAYFLRLRAASTLAENSTPSKKKERLDNAVAA 241

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
            +  +  Y  S + + AR      + ++   E
Sbjct: 242 YNAFMRYYAESEFAEDARQLYADLQEEITEFE 273



 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 8/86 (9%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA--------LMDE 245
             +   Y ++G+Y  A  +F+  L +Y  ++ A EA     ++Y  L+          D+
Sbjct: 74  FFLADSYFQKGDYNFAGYQFERFLKSYPKSDKAPEAAFLGAKSYYMLSPRYSLDQTDTDK 133

Query: 246 AREVVSLIQERYPQGYWARYVETLVK 271
           A   + +    YP+  +      + +
Sbjct: 134 ALNKLQVFINAYPESEFMEEANAMAQ 159


>gi|196231811|ref|ZP_03130667.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
           Ellin428]
 gi|196223933|gb|EDY18447.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
           Ellin428]
          Length = 419

 Score =  105 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 56/156 (35%)

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
            +A   F    ++ PF+ +A  S             Y +A    +   T+YP        
Sbjct: 152 QRAQAMFESIVKNAPFSKLAPLSQFNVGQALEKQNDYPKAIEAYQAVYTKYPNDPVAADA 211

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
            Y VG   A+  R+  YD    +   +       RY NS  V  A   +           
Sbjct: 212 LYQVGYVRAKDAREGSYDPATNRKAREAFEDFTARYPNSEKVAQANENIRNLEGGTNKNI 271

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
           ++I ++Y K  ++ +A+  +  V+     +  AE A
Sbjct: 272 LDIAKFYDKTRKFKSAVIYYNDVIKAQPGSPEAEYA 307



 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 78/234 (33%), Gaps = 36/234 (15%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
           V  D         E  +KA       N S AY+ +    + F  + +A K+      +  
Sbjct: 36  VEGDDTAVAGSAAEQMKKAEKLEASGNDSGAYKSYKALVKRFGQSFLAPKAQRKVGMLLE 95

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYV---------YYLVGMSYAQMIRDVPYDQRATK 156
               Y +A      Y+T+YP+ ++ D V          +L G    + +  VP      +
Sbjct: 96  KHHDYDKAFDAYNSYLTKYPQGEDFDAVVDSMFKIAKLFLEG--QKRKVFGVPVGPSMQR 153

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                   IV+    S     ++                +G+   K+ +Y  AI  +Q V
Sbjct: 154 -AQAMFESIVKNAPFSKLAPLSQ--------------FNVGQALEKQNDYPKAIEAYQAV 198

Query: 217 LANYSDAEHAEEAMARLVE---------AYVALALMDEAREVVSLIQERYPQGY 261
              Y +   A +A+ ++           +Y   A   +ARE       RYP   
Sbjct: 199 YTKYPNDPVAADALYQVGYVRAKDAREGSYDP-ATNRKAREAFEDFTARYPNSE 251



 Score = 54.4 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 58/158 (36%), Gaps = 14/158 (8%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
             +  ++          +       K+ ++ KA E +      +P   VA  +L    +V
Sbjct: 159 ESIVKNAPFSKLAPLSQFNVGQALEKQNDYPKAIEAYQAVYTKYPNDPVAADALYQVGYV 218

Query: 104 QYSA---GKYQ-----QAASLGEEYITQYPESKNVDYV----YYLVGMSYAQMIRDV-PY 150
           +      G Y      +A    E++  +YP S+ V         L G +   ++     Y
Sbjct: 219 RAKDAREGSYDPATNRKAREAFEDFTARYPNSEKVAQANENIRNLEGGTNKNILDIAKFY 278

Query: 151 DQ-RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           D+ R  K  + Y + +++    SP  + A+  +   +N
Sbjct: 279 DKTRKFKSAVIYYNDVIKAQPGSPEAEYAKGRIEALKN 316


>gi|289548801|ref|YP_003473789.1| outer membrane assembly lipoprotein YfiO [Thermocrinis albus DSM
           14484]
 gi|289182418|gb|ADC89662.1| outer membrane assembly lipoprotein YfiO [Thermocrinis albus DSM
           14484]
          Length = 301

 Score =  105 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 72/186 (38%), Gaps = 6/186 (3%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQ----CSRDFPFAGVARKSLLMSAFVQYSAGKY 110
           +  +++Y + +     +++ KA E   +         P     + +    A   Y    Y
Sbjct: 29  KIAQDLYSEGMAAYASRDYGKAIERLKEALRYLENLTP--SQIKDAKYAIADSYYMKKDY 86

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    E+++  YP     +  +Y +  SY ++  D   DQ  T   L      + +Y 
Sbjct: 87  VNAVVYLEDFVASYPGLPETERAFYQLVDSYMKVAPDAYRDQSYTLKALDKAREFLSKYP 146

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
           +SPY       +     +LA  +  I R+Y   G Y +A  R++ +L NY +     E  
Sbjct: 147 SSPYADKVGDLIQQAVEKLAKHQYLIARFYEDYGYYYSAALRYRDLLINYPEQISDAEVS 206

Query: 231 ARLVEA 236
            R + +
Sbjct: 207 YRYIRS 212



 Score = 40.9 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 16/90 (17%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA------------LA 241
             I   Y  + +YV A+   +  +A+Y      E A  +LV++Y+             L 
Sbjct: 74  YAIADSYYMKKDYVNAVVYLEDFVASYPGLPETERAFYQLVDSYMKVAPDAYRDQSYTLK 133

Query: 242 LMDEAREVVSLIQERYPQGYWARYVETLVK 271
            +D+ARE +S    +YP   +A  V  L++
Sbjct: 134 ALDKAREFLS----KYPSSPYADKVGDLIQ 159


>gi|256820330|ref|YP_003141609.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga ochracea
           DSM 7271]
 gi|256581913|gb|ACU93048.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga ochracea
           DSM 7271]
          Length = 268

 Score =  105 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 49/220 (22%), Positives = 83/220 (37%), Gaps = 10/220 (4%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +A    K + + KA   F Q + ++       +   M     Y   +Y  A+   E  
Sbjct: 35  YTEAEKLYKAKKYKKATRLFEQIASEYAGKPQGERIYYMFGDSYYQLKQYSLASYQFERL 94

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
              YP S+      +L   S          DQ  T   L+ +   ++RY++S Y K A  
Sbjct: 95  QKLYPRSEKATESAFLEAKSLYLETPKYSVDQTYTYQALEKLQYFLDRYSDSEYAKEANE 154

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA-RLVEAYV- 238
                  +L  KE EI + Y +  +Y AA+      L N   +   E+A+  RL  AY  
Sbjct: 155 LALDLVTRLEKKEFEIAKQYDQIRDYQAAMKSLDNFLTNNPGSAFREDALYTRLHSAYEW 214

Query: 239 --------ALALMDEAREVVSLIQERYPQGYWARYVETLV 270
                       ++ A+E    +   YP+  + +  E ++
Sbjct: 215 AINSIETKKEERLNTAKEAYDNLLRAYPETKYKKEAENML 254


>gi|315223392|ref|ZP_07865249.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga ochracea
           F0287]
 gi|314946565|gb|EFS98556.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga ochracea
           F0287]
          Length = 268

 Score =  105 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 49/220 (22%), Positives = 83/220 (37%), Gaps = 10/220 (4%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +A    K + + KA   F Q + ++       +   M     Y   +Y  A+   E  
Sbjct: 35  YTQAEKLYKAKKYKKATRLFEQIASEYAGKPQGERIYYMFGDSYYQLKQYSLASYQFERL 94

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
              YP S+      +L   S          DQ  T   L+ +   ++RY++S Y K A  
Sbjct: 95  QKLYPRSEKATESAFLEAKSLYLETPKYSVDQTYTYQALEKLQYFLDRYSDSEYAKEANE 154

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA-RLVEAYV- 238
                  +L  KE EI + Y +  +Y AA+      L N   +   E+A+  RL  AY  
Sbjct: 155 LALDLVTRLEKKEFEIAKQYDQIRDYQAAMKSLDNFLTNNPGSVFREDALYTRLHSAYEW 214

Query: 239 --------ALALMDEAREVVSLIQERYPQGYWARYVETLV 270
                       ++ A+E    +   YP+  + +  E ++
Sbjct: 215 AINSIETKKEERLNTAKEAYDNLLRAYPETKYKKEAENML 254


>gi|188995218|ref|YP_001929470.1| hypothetical protein PGN_1354 [Porphyromonas gingivalis ATCC 33277]
 gi|188594898|dbj|BAG33873.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC
           33277]
          Length = 310

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 52/277 (18%), Positives = 98/277 (35%), Gaps = 23/277 (8%)

Query: 9   ICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL 68
           +C  ++   Q    +  + F  A+ FL     +  R       +        Y  A  F 
Sbjct: 29  LCEVKSIIRQKQMTSRKLIFFAALTFLFASCGEFVRIQQSPDTSLK------YSYAKKFY 82

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
            E+ +SKA          +       + + + A       +   A    +EY  +YP+  
Sbjct: 83  NERKYSKAASLLEDVRGIYDGTSEGEQLMFLLAECYLEMRRDADAGICYQEYYNKYPKGL 142

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
             +   Y  G  + +   D   DQ  T L +Q +   ++ + N  Y K A   +   +++
Sbjct: 143 RAEEARYKAGYCFYEASPDSRLDQSDTYLAIQELQSYLDFFPNGKYAKEAENMLFGLQDK 202

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPR-----FQLVLANYSDAEHAEEAMARLVEA------- 236
           LA KE    + Y   G Y+    R      +  L  Y   +H EE +  +++A       
Sbjct: 203 LAYKEYRTAKLYYNLGLYLGNNYRSCIVTAEAALKTYPYTKHREELVFLMLQAMYEEASF 262

Query: 237 ----YVALALMDEAREVVSLIQERYPQGYWARYVETL 269
                +     D A +  + I E +P G + +  + +
Sbjct: 263 SVSEKLQTRYRDVADQYFAYINE-FPNGKYLKQAKKI 298


>gi|288818733|ref|YP_003433081.1| DNA uptake lipoprotein [Hydrogenobacter thermophilus TK-6]
 gi|288788133|dbj|BAI69880.1| DNA uptake lipoprotein [Hydrogenobacter thermophilus TK-6]
 gi|308752320|gb|ADO45803.1| outer membrane assembly lipoprotein YfiO [Hydrogenobacter
           thermophilus TK-6]
          Length = 298

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 46/227 (20%), Positives = 94/227 (41%), Gaps = 13/227 (5%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ--- 82
           I F   +  + G  + +            +   E Y++ ++    +++SKA E   +   
Sbjct: 4   ILFITLLALVFGCAKMTEEKR-------AKLAIEYYQEGMVAYANRDYSKAVERLKEALK 56

Query: 83  -CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
                 P     + +  + A   Y    Y  A    E+++  YP+    +  Y+++  SY
Sbjct: 57  YLENLTPQQI--KDAKYVIAESYYMNKDYINAVVYFEDFLFYYPDVSESEKAYFMLVDSY 114

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            ++  D   DQ  T   +  +   + ++  SPY +  R  +   + +LA  E  IGR+Y 
Sbjct: 115 MKVAPDPYRDQTYTLKAIDKVKDFLSKFPQSPYAERVRAIMEDAQRKLARHEYLIGRFYE 174

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
             G Y +A  R++ +L NY +     E   R +++ + + L  + +E
Sbjct: 175 DFGYYYSASLRYRDLLINYPEQVSDVEVSFRYIKSLLLVRLQAKRQE 221


>gi|189502538|ref|YP_001958255.1| hypothetical protein Aasi_1196 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189497979|gb|ACE06526.1| hypothetical protein Aasi_1196 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 267

 Score =  104 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/250 (18%), Positives = 92/250 (36%), Gaps = 20/250 (8%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            I   +    L      +    YL            Y++AV   + +++ +A + F +  
Sbjct: 6   FIKIGLIGLALASCATHTHSGNYLSK----------YQQAVARYEAKDYYEALQLFKEVI 55

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
                      +    A+  +    Y+ +A   E +   YP     +   Y+ G S    
Sbjct: 56  PMLKGRKEIIPAQFYQAYAYFYQKSYKMSAYCFESFYKTYPRLAQAEEALYMQGYSLYLS 115

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
           I D+  DQ  T+  L+ +   + +Y +  Y + A  Y    +N+L  K  +  + Y + G
Sbjct: 116 IPDIRLDQAVTEKALKTLQTYLNKYPSGTYQQEAHQYNDELQNKLMLKSFKAAKLYYELG 175

Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE----------VVSLIQ 254
            Y AA+         Y ++ + EEA+   ++A    AL  E +E             +  
Sbjct: 176 HYKAAVIALGNFREKYPESIYQEEALCLQIQAQYKWALGSEVKEQPDRLYAVVNYYYIFL 235

Query: 255 ERYPQGYWAR 264
           +++P   + +
Sbjct: 236 DKFPNSKYLK 245


>gi|332291070|ref|YP_004429679.1| outer membrane assembly lipoprotein YfiO [Krokinobacter diaphorus
           4H-3-7-5]
 gi|332169156|gb|AEE18411.1| outer membrane assembly lipoprotein YfiO [Krokinobacter diaphorus
           4H-3-7-5]
          Length = 270

 Score =  104 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 47/220 (21%), Positives = 83/220 (37%), Gaps = 14/220 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YE A     +  + KA   + Q    +     A +   + A   Y  G Y       E +
Sbjct: 33  YEFADSLYSQGKYKKALRLWEQIVPLYRGRPQAERVTYLYANTFYELGDYYSGGYQFERF 92

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +  +P+S   +   +    SY +       DQ  T + L+ +   +  Y +S  V  A  
Sbjct: 93  VKSFPQSTKREEAAFKSAESYYRRSPRFNLDQGDTYIALEKLQGFINEYPDSEQVDDANA 152

Query: 181 YVTVGRNQLAAKEVEIGRYYLK----RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
            V     +L  K  EI + Y K    RG +  AI  F   L +   + + E+A+     +
Sbjct: 153 KVQELNTKLERKSYEIAKGYNKIGASRGTFPNAISAFDNFLLDNPGSIYREDALYWKFNS 212

Query: 237 YVALAL----------MDEAREVVSLIQERYPQGYWARYV 266
              LA+          ++ A+   + +++ YPQG +A   
Sbjct: 213 AYQLAMGSVKRLQVERLEAAKAAYNALEKYYPQGKYADEA 252



 Score = 42.0 bits (98), Expect = 0.099,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 30/87 (34%), Gaps = 2/87 (2%)

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM-IRDVPYDQ-RATKLMLQYMSRIVE 167
           +  A S  + ++   P S   +   Y    S  Q+ +  V   Q    +      + + +
Sbjct: 182 FPNAISAFDNFLLDNPGSIYREDALYWKFNSAYQLAMGSVKRLQVERLEAAKAAYNALEK 241

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEV 194
            Y    Y   A   +     +L AK++
Sbjct: 242 YYPQGKYADEAAKEIAEVNEELQAKDL 268


>gi|313886707|ref|ZP_07820417.1| outer membrane assembly lipoprotein YfiO [Porphyromonas
           asaccharolytica PR426713P-I]
 gi|312923869|gb|EFR34668.1| outer membrane assembly lipoprotein YfiO [Porphyromonas
           asaccharolytica PR426713P-I]
          Length = 270

 Score =  104 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 70/184 (38%), Gaps = 5/184 (2%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A  +  E  +S+  E        +       ++L + A       +   AA      
Sbjct: 37  YSYAKKYYNEGKYSRVAELMVDVLPHYEGTQEGAQALYIMADALLQNKQESSAAEYFRRL 96

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
            T+YP+       +Y  G++  ++  D   DQ  T   L+ +   +E Y  + + K    
Sbjct: 97  YTKYPQDPRATEAHYKTGLALYRIAPDPRLDQSVTYSALKELQSFLETYPQNEHRKEVEQ 156

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRG-----EYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
            +   ++ LA KE+     Y   G      Y++AI   +  L +Y   +H E+ +  +VE
Sbjct: 157 MLFDLQDNLAKKELNTADLYYNLGTYLGNNYISAIITARNALKSYPYTKHREDLLFIIVE 216

Query: 236 AYVA 239
           A   
Sbjct: 217 ASYQ 220


>gi|145641510|ref|ZP_01797088.1| conserved hypothetical lipoprotein [Haemophilus influenzae R3021]
 gi|145273801|gb|EDK13669.1| conserved hypothetical lipoprotein [Haemophilus influenzae 22.4-21]
          Length = 129

 Score =  104 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 7/116 (6%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
           +G     S+DV   SV       E+Y K    L+E ++S+A  Y    +  FP +    +
Sbjct: 17  IGCSS-GSKDVEQASV------NELYTKGTTSLQEGSYSEAIRYLKATTERFPGSVYQEQ 69

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
           ++L   +  Y    Y Q   + + ++ Q+P+S N  Y  Y+ G++ A    +   D
Sbjct: 70  AMLDLIYANYKTQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNFIQD 125


>gi|332300044|ref|YP_004441965.1| outer membrane assembly lipoprotein YfiO [Porphyromonas
           asaccharolytica DSM 20707]
 gi|332177107|gb|AEE12797.1| outer membrane assembly lipoprotein YfiO [Porphyromonas
           asaccharolytica DSM 20707]
          Length = 270

 Score =  104 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 69/184 (37%), Gaps = 5/184 (2%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A  +  E  + +  E        +       ++L + A       +   AA      
Sbjct: 37  YSYAKKYYNEGKYGRVAELMVDVLPHYEGTQEGAQALYIMADALLQNKQESSAAEYFRRL 96

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
            T+YP+       +Y  G++  ++  D   DQ  T   L+ +   +E Y  + + K    
Sbjct: 97  YTKYPQDPRATEAHYKTGLALYRIAPDPRLDQSVTYSALKELQSFLETYPQNEHRKEVEQ 156

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRG-----EYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
            +   ++ LA KE+     Y   G      Y++AI   +  L +Y   +H E+ +  +VE
Sbjct: 157 MLFDLQDNLAKKELNTADLYYNLGTYLGNNYISAIITARNALKSYPYTKHREDLLFIIVE 216

Query: 236 AYVA 239
           A   
Sbjct: 217 ASYQ 220


>gi|299140559|ref|ZP_07033697.1| lipoprotein [Prevotella oris C735]
 gi|298577525|gb|EFI49393.1| lipoprotein [Prevotella oris C735]
          Length = 283

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 72/191 (37%), Gaps = 11/191 (5%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YE A     +  +++A                A++SL M A  +Y +  Y+ AA   + Y
Sbjct: 35  YEFAKECYAKGRYTQAITLLTDLINIQKGTDNAQESLYMLAMAEYGSMDYEGAAQAFKRY 94

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
              YP+    +  +Y  G+S  +   +   DQ  T   +      ++ Y ++     A+ 
Sbjct: 95  YQSYPKGYLAEMAHYYEGLSLYKSTPEPRLDQSMTVSAINAFQTYLDLYPDAKLKPEAQK 154

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRG-----------EYVAAIPRFQLVLANYSDAEHAEEA 229
           Y+   +++L  KE+   R Y   G            Y A I   Q  L +Y      EE 
Sbjct: 155 YLFELQDKLVLKELYSARLYYNLGPYFGNCSDGGNNYEACIVTCQNALKDYPYTALREEF 214

Query: 230 MARLVEAYVAL 240
              L+++   L
Sbjct: 215 SLLLMKSKFEL 225


>gi|281423192|ref|ZP_06254105.1| putative lipoprotein [Prevotella oris F0302]
 gi|281402528|gb|EFB33359.1| putative lipoprotein [Prevotella oris F0302]
          Length = 286

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 72/191 (37%), Gaps = 11/191 (5%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YE A     +  +++A                A++SL M A  +Y +  Y+ AA   + Y
Sbjct: 38  YEFAKECYAKGRYTQAITLLTDLINIQKGTDNAQESLYMLAMAEYGSMDYEGAAQAFKRY 97

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
              YP+    +  +Y  G+S  +   +   DQ  T   +      ++ Y ++     A+ 
Sbjct: 98  YQSYPKGYLAEMAHYYEGLSLYKSTPEPRLDQSMTVSAINAFQTYLDLYPDAKLKPEAQK 157

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRG-----------EYVAAIPRFQLVLANYSDAEHAEEA 229
           Y+   +++L  KE+   R Y   G            Y A I   Q  L +Y      EE 
Sbjct: 158 YLFELQDKLVLKELYSARLYYNLGPYFGNCSDGGNNYEACIVTCQNALKDYPYTALREEF 217

Query: 230 MARLVEAYVAL 240
              L+++   L
Sbjct: 218 SLLLMKSKFEL 228


>gi|149278759|ref|ZP_01884894.1| conserved hypothetical lipoprotein [Pedobacter sp. BAL39]
 gi|149230378|gb|EDM35762.1| conserved hypothetical lipoprotein [Pedobacter sp. BAL39]
          Length = 309

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 55/268 (20%), Positives = 91/268 (33%), Gaps = 25/268 (9%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           K  L + F+I    + G + Q  +    + V         Y++A+    ++N+SKA   F
Sbjct: 5   KHLLILSFTIIALTIAGCKSQFEKIRLSNDVAKK------YQEAMRLYNKKNYSKAIILF 58

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQ--YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
              S+ +     A    L   +    Y    Y  A    + +   YP SK  +   YL  
Sbjct: 59  EDLSQKYRGRAEAED--LNYYYSLTLYKLKDYTTARYQFKSFADTYPTSKYAEECRYLGA 116

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
             Y         DQ  T   +  +   +  Y  S     A  Y+   RN+L  K     +
Sbjct: 117 YCYYLESPIWSLDQENTYKAIDALQLFINFYPKSERAADASKYIADLRNKLETKAFNNAK 176

Query: 199 YYLKRG-----EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM---------- 243
            Y   G      Y +A+   +    ++ D + AEE    +V++  A A            
Sbjct: 177 LYYTLGGYDINNYKSAVIALKNAQIDFPDIKFAEEMDLLIVKSQFAYAKNSYETRQEDRY 236

Query: 244 DEAREVVSLIQERYPQGYWARYVETLVK 271
            EA        E +P+       + L K
Sbjct: 237 SEAITYADEFIESHPESKLLPEAQELKK 264


>gi|126661830|ref|ZP_01732829.1| TPR repeat protein [Flavobacteria bacterium BAL38]
 gi|126625209|gb|EAZ95898.1| TPR repeat protein [Flavobacteria bacterium BAL38]
          Length = 264

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 90/256 (35%), Gaps = 17/256 (6%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            I F     FL+            D         ++YE          + KA   + Q +
Sbjct: 4   VISFLFIAFFLISCSEYQKALKSDDVAVKNEAANKMYE-------SGKYLKAIRLYEQIA 56

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
             +     A +     +   Y + +Y  A    E ++  YP+S+  +   +     + ++
Sbjct: 57  PAYKGKPSAERMFYFYSMALYKSNQYYLAGYQLENFVATYPKSEKREESAFYAAECFYKL 116

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
                 DQ  T   L  M   ++ Y +S ++  A  YV   R +L  K  EI + Y    
Sbjct: 117 SPKYSLDQTDTSKALDKMQHFIDVYPDSQFLTQANVYVKELREKLEKKAFEIAKQYNTIS 176

Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM----------DEAREVVSLIQ 254
           +Y  A+   +  LA+Y      E+A+   +++   LA+             A+   + + 
Sbjct: 177 DYKGALKALENFLADYPGTPFKEQALYYRLDSAYNLAINSIELKKQERLSYAKSTYANLV 236

Query: 255 ERYPQGYWARYVETLV 270
           +   Q  +    + ++
Sbjct: 237 KFNEQSEYKEKADKML 252


>gi|15606494|ref|NP_213874.1| hypothetical protein aq_1273 [Aquifex aeolicus VF5]
 gi|18202108|sp|O67310|Y1273_AQUAE RecName: Full=UPF0169 lipoprotein aq_1273; Flags: Precursor
 gi|2983713|gb|AAC07276.1| putative protein [Aquifex aeolicus VF5]
          Length = 306

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/179 (21%), Positives = 75/179 (41%), Gaps = 3/179 (1%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRD--FPFAGVARKSLLMSAFVQYSAGKYQQA 113
           Y +E YEK +   ++ ++  A   F +             +K   +     Y    Y  A
Sbjct: 32  YAKEFYEKGLSEYRKGDYGDAKSNFEKALNYLEHLTPEQIKKVKYLLVKSAYKDKDYVDA 91

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
               E+++  YP SK  + V+Y++  S  ++  D   DQ  T   ++     + +Y +S 
Sbjct: 92  VVYAEDFLANYPGSKEAEEVFYILVDSLVKVAPDPYRDQTYTVEAIRKAKEFLAKYPDSR 151

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
           + +     +     +LA  E  I ++Y + G    A  R++ VL N+ +   +EE +A 
Sbjct: 152 FTRKVEEVIEEANKKLAYHEYYIAKFYEEYGYPYNAAIRYREVLINFPEY-FSEERLAY 209



 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 49/146 (33%), Gaps = 28/146 (19%)

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
           +Y  G+S  +   D    +   +  L Y+  +                V     + A   
Sbjct: 36  FYEKGLSEYRK-GDYGDAKSNFEKALNYLEHL---------TPEQIKKVKYLLVKSA--- 82

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA--------YVALALMDE 245
                   K  +YV A+   +  LANY  ++ AEE    LV++        Y       E
Sbjct: 83  -------YKDKDYVDAVVYAEDFLANYPGSKEAEEVFYILVDSLVKVAPDPYRDQTYTVE 135

Query: 246 AREVVSLIQERYPQGYWARYVETLVK 271
           A         +YP   + R VE +++
Sbjct: 136 AIRKAKEFLAKYPDSRFTRKVEEVIE 161


>gi|325852010|ref|ZP_08171093.1| outer membrane assembly lipoprotein YfiO [Prevotella denticola CRIS
           18C-A]
 gi|325484566|gb|EGC87482.1| outer membrane assembly lipoprotein YfiO [Prevotella denticola CRIS
           18C-A]
          Length = 290

 Score =  103 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 52/286 (18%), Positives = 94/286 (32%), Gaps = 29/286 (10%)

Query: 7   RAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVL 66
           R IC F   +  + K  L     I +C  +     +     +   T+  Y+   YE A  
Sbjct: 5   RIICNFALQSQIMKKRIL-----IGICAALLCTSCAHEYNQVYKTTNNDYK---YEFAKE 56

Query: 67  FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
              +  +  A                A++ L M    +Y    YQ A+   ++Y   YP 
Sbjct: 57  CFAKGKYGFAVPLLQDLVTVEKGTDNAQECLYMLGMAEYGLKDYQAASETFKKYYQTYPR 116

Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
            +  +   + +G S  +   +   DQ  T   +      ++ Y N      A+  +   +
Sbjct: 117 GQYAEMASFYIGQSLFEGTPEPRLDQTPTVAAIAAFQDYLDIYPNGKLKGTAQQRLFELQ 176

Query: 187 NQLAAKEVEIGRYYLKRG-----------EYVAAIPRFQLVLANYSDAEHAEE-AMARLV 234
           ++L  KE    + Y   G            Y A I   Q  L +Y  +   E+ A+  + 
Sbjct: 177 DKLIRKEYLSAKLYYNLGSYFGNCTSGGNNYEACIITAQNALNDYPYSNMREDFAVLVMK 236

Query: 235 EAYVALALMDEAREVVSL---------IQERYPQGYWARYVETLVK 271
             Y    +  EA+++                YP     +  E  +K
Sbjct: 237 SKYELAQMSVEAKKLQRFQDAEDECYGFINEYPDSKERKTAEEYIK 282


>gi|317502715|ref|ZP_07960826.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
 gi|315666159|gb|EFV05715.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
          Length = 290

 Score =  103 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 47/233 (20%), Positives = 82/233 (35%), Gaps = 16/233 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           ++     I   I V  L     Q    VY       +     YE A     E  +++A  
Sbjct: 1   MFDMKKKILIPICVTLLFTSCAQEFNKVYKTDNYQYK-----YEFAKECYAEGKYTQAIT 55

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                         A++SL M A  +Y +  Y+ A+   + Y   YP+    +  +Y  G
Sbjct: 56  LLTDLINIEKGTDNAQESLYMLAMAEYGSMDYEGASQAFKRYYQSYPKGYLAEMAHYYEG 115

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           ++  +   +   DQ  T   +      ++ Y ++     A+ Y+   +++L  KE+   R
Sbjct: 116 LALYKSTPEPRLDQSMTISAINAFQTFLDLYPDAKLRPEAQKYLFELQDKLVLKELYSAR 175

Query: 199 YYLKRG-----------EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
            Y   G            Y A I   Q  L +Y      EE    L+++   L
Sbjct: 176 LYYNLGPYFGNCSDGGNNYEARIVTCQNALKDYPYTSLREEFSLLLMKSKFEL 228


>gi|313157575|gb|EFR56991.1| outer membrane assembly lipoprotein YfiO [Alistipes sp. HGB5]
          Length = 273

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 42/225 (18%), Positives = 91/225 (40%), Gaps = 10/225 (4%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
              +Y KA+ + +++ +S+A   F      +            +A  +Y    Y  AA+L
Sbjct: 33  PDLIYSKALEYYQKEKWSRASTLFEGVQHYYSGTPREDSISFFNARCKYKNRDYDTAATL 92

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            +++  ++  S  ++    +  + +  +      DQ  T   L  ++  + RY +S  ++
Sbjct: 93  LDDFRRKFGRSAFIEDAEGMYALCFYYLSPGPSRDQTMTGQALIAINEFMSRYPHSEQIE 152

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
             +   T    +L  K       Y K G Y +AI   +  L  Y ++ H EE M  +V+A
Sbjct: 153 NFKTINTELTQRLHDKAYLNAYTYYKIGRYKSAIVSLKNALKQYPESSHREEIMYLIVDA 212

Query: 237 YVALALMDEARE----VVSLI------QERYPQGYWARYVETLVK 271
               A    A +     ++++      +E +P+    + V+ + +
Sbjct: 213 SYRFASNSVAEKQTDRYLAMLDSYLSFKEEFPESKHIKEVDRMAQ 257



 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 3/97 (3%)

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG-MSYAQMIRDVPYDQR 153
           K+ L  A+  Y  G+Y+ A    +  + QYPES + + + YL+   SY      V   Q 
Sbjct: 168 KAYLN-AYTYYKIGRYKSAIVSLKNALKQYPESSHREEIMYLIVDASYRFASNSVAEKQT 226

Query: 154 ATKLM-LQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
              L  L       E +  S ++K         R+ L
Sbjct: 227 DRYLAMLDSYLSFKEEFPESKHIKEVDRMAQHARDYL 263


>gi|163782371|ref|ZP_02177369.1| hypothetical protein HG1285_06275 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882404|gb|EDP75910.1| hypothetical protein HG1285_06275 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 307

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 41/184 (22%), Positives = 77/184 (41%), Gaps = 2/184 (1%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD--FPFAGVARKSLLMSAFVQYSAGKYQQ 112
           +  +E Y +A+   KE+++  A   FN+  +   +        +  + A   Y  G Y  
Sbjct: 30  KKAQEYYREALSAYKEKDYGDAAWNFNEALKYMDYLTPKQIENAKFLLAKSYYYDGDYVN 89

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A    E+YI  YP+ +  +  +YL+  SY  +  D   DQ  T   ++     + R+ NS
Sbjct: 90  AVVALEDYIFYYPKLRRTEEAFYLLIDSYINVSPDPYRDQEYTWKAIEKAKEFLSRFPNS 149

Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
            +    +  +     ++A  E+ I ++Y   G   +A  R++ VL N+       E   R
Sbjct: 150 TFAPKVQKLIDKAYRKIAQHELYIAKFYEDYGYTYSAALRYREVLINFPGHVSESEVAYR 209

Query: 233 LVEA 236
            +  
Sbjct: 210 YIRC 213



 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 47/133 (35%), Gaps = 15/133 (11%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVK------GARFYVTVGR-NQLAAKEVEIGRYYLKRGE 205
              K   +Y    +  Y    Y         A  Y+      Q+   +  + + Y   G+
Sbjct: 27  ERAKKAQEYYREALSAYKEKDYGDAAWNFNEALKYMDYLTPKQIENAKFLLAKSYYYDGD 86

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD--------EAREVVSLIQERY 257
           YV A+   +  +  Y      EEA   L+++Y+ ++           +A E       R+
Sbjct: 87  YVNAVVALEDYIFYYPKLRRTEEAFYLLIDSYINVSPDPYRDQEYTWKAIEKAKEFLSRF 146

Query: 258 PQGYWARYVETLV 270
           P   +A  V+ L+
Sbjct: 147 PNSTFAPKVQKLI 159


>gi|307565537|ref|ZP_07628017.1| outer membrane assembly lipoprotein YfiO [Prevotella amnii CRIS
           21A-A]
 gi|307345696|gb|EFN91053.1| outer membrane assembly lipoprotein YfiO [Prevotella amnii CRIS
           21A-A]
          Length = 309

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 47/288 (16%), Positives = 94/288 (32%), Gaps = 29/288 (10%)

Query: 5   LGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKA 64
           + R I IF +    + K   +I  S  V  +          VY  +  + +     YE A
Sbjct: 22  ISRIILIFASQIVNMKK---SIILSFCVALIFCSCAHEYNVVYKSADPEYK-----YEFA 73

Query: 65  VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
                +  F+                   ++SL M A  +Y    Y  A+ + ++Y   Y
Sbjct: 74  KELFVKGKFASVIPLLQDLVVTLKGTENGQESLYMLAKAEYGMKDYDAASEIFKKYYQSY 133

Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
           P+    +   + +G    +   +   DQ  T   +Q     ++ + +    + A+  +  
Sbjct: 134 PKGIYAEMAQFNIGQCLYENAPEPRLDQTPTIAAIQAFQDYLDLFPDGKMKEKAQERMFE 193

Query: 185 GRNQLAAKEVEIGRYYLKRG-----------EYVAAIPRFQLVLANYSDAEHAEE-AMAR 232
            +++L  KE    + Y   G            Y A +   Q  + +Y  +   EE A+  
Sbjct: 194 LQDKLVKKEYLNAKLYYNLGSYFGNCTSGGNNYEACVITAQNAINDYPYSNLREEFAILI 253

Query: 233 LVEAYV---------ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           +   +           L    +A +       ++P        E  +K
Sbjct: 254 MKSKFELAHMSVDAKKLQRFQDAEDECYGFINQFPDSKERHTAEEYIK 301


>gi|188996909|ref|YP_001931160.1| Tetratricopeptide TPR_2 repeat protein [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188931976|gb|ACD66606.1| Tetratricopeptide TPR_2 repeat protein [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 311

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 41/200 (20%), Positives = 68/200 (34%), Gaps = 11/200 (5%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN--Q 82
            + F I+   ++            D    +   +E   K +   K+  + KA E      
Sbjct: 4   FVVFLISGLVIISCA---------DKGQKLYEGQEKLSKGLELYKKGEYKKAKEELKNAI 54

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
                       ++    A   Y+  +Y  A    EE+I  +P S  +    Y + MSY 
Sbjct: 55  FKSQGLTPAQIMEARFALADSYYNREEYIDAIVEFEEFIALFPTSPRMPEALYKLAMSYL 114

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
            +  D   D        +    I+  Y +S YVK A+  +       A   + I   Y K
Sbjct: 115 FVSPDYKRDMTYVNKAQEKAEEIISSYPDSKYVKAAKEILKKINEIKAKHTLYIAETYEK 174

Query: 203 RGEYVAAIPRFQLVLANYSD 222
            G+  +A   +Q    NY D
Sbjct: 175 YGKPYSASVYYQEAYTNYKD 194



 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 38/86 (44%), Gaps = 8/86 (9%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV--------ALALMDE 245
             +   Y  R EY+ AI  F+  +A +  +    EA+ +L  +Y+         +  +++
Sbjct: 70  FALADSYYNREEYIDAIVEFEEFIALFPTSPRMPEALYKLAMSYLFVSPDYKRDMTYVNK 129

Query: 246 AREVVSLIQERYPQGYWARYVETLVK 271
           A+E    I   YP   + +  + ++K
Sbjct: 130 AQEKAEEIISSYPDSKYVKAAKEILK 155


>gi|189501394|ref|YP_001960864.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeobacteroides
           BS1]
 gi|189496835|gb|ACE05383.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeobacteroides
           BS1]
          Length = 299

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 40/282 (14%), Positives = 86/282 (30%), Gaps = 51/282 (18%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
               +T+ F  A                           E Y  A   + ++++ KA   
Sbjct: 10  RMALITLVFLAAGTLFTACSSV--------KAPKSGEVSERYSYAQALIADEDYDKAVFE 61

Query: 80  FNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
                         +    L   A   Y++ +Y  A  + +  + Q P S   +   + +
Sbjct: 62  LESLMFDTRA--TALEDDVLFSLAEAYYNSKQYLLAVDIYKRLLEQTPGSPYAEDAQFKL 119

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT--------------------------- 170
             S+ ++      D   T+  ++     +E Y                            
Sbjct: 120 AQSHKKLSPVSTRDHEHTRKAIREFQLYLELYPVRDPQQLKSDIDLYTELSRLNPENDSY 179

Query: 171 -------NSPYVK-----GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
                   + Y +      +   +T+ R +LA  E  I  +Y K  +Y  A+  +  ++ 
Sbjct: 180 KRSLAAAEAQYARIDNVTESISSITLLREKLAEHEFSIAEHYRKLKKYRGALSYYDGIIR 239

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            Y D  + E+A    ++  V      EA+  +    +++P+ 
Sbjct: 240 FYPDTVYVEKAWYGKIDVLVKREKWFEAQAAIEAYDQQFPEN 281


>gi|288800000|ref|ZP_06405459.1| lipoprotein [Prevotella sp. oral taxon 299 str. F0039]
 gi|288333248|gb|EFC71727.1| lipoprotein [Prevotella sp. oral taxon 299 str. F0039]
          Length = 278

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 45/274 (16%), Positives = 94/274 (34%), Gaps = 27/274 (9%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +   +  + + +++C       + ++   +   TD  Y+   YE A      + + +A  
Sbjct: 1   MKNLSFIVIYIVSLCVFSSCANEFNQ---VYKTTDFNYK---YEYAKECFLNKKYQRASI 54

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                         A++ L M    QY   +Y  AA   ++Y + YP+    +   + +G
Sbjct: 55  LLQDVVVQQKGTDNAQECLYMLGMAQYLNKEYDLAAQTFKKYYSSYPKGVYAEDAEFYIG 114

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
            S      +   DQ  T   +      ++ + ++ + K A+  +   +++L  KE+   +
Sbjct: 115 QSLYMSTPEPRLDQTQTIAAISAFQDYLDLFPDAIHKKEAQQCLFALQDKLIKKELYSAQ 174

Query: 199 YYLKRG-----------EYVAAIPRFQLVLANYSDAEHAEE-AMARLVEAYV-------- 238
            Y   G            Y A I   Q  L +Y  +   E+ A+  +   +         
Sbjct: 175 LYFDLGTYFGNCGPGENNYDACIITAQNALKDYPYSTKREDFALLIMKSKFELATQSIDE 234

Query: 239 -ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
             L    +A +        YP        E  +K
Sbjct: 235 KKLERYQDAEDECYGFINEYPDSKSRTLAEKYIK 268


>gi|327312371|ref|YP_004327808.1| outer membrane assembly lipoprotein YfiO [Prevotella denticola
           F0289]
 gi|326944525|gb|AEA20410.1| outer membrane assembly lipoprotein YfiO [Prevotella denticola
           F0289]
          Length = 290

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 52/286 (18%), Positives = 94/286 (32%), Gaps = 29/286 (10%)

Query: 7   RAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVL 66
           R IC F   +  + K  L     I +C  +     +     +   T+  Y+   YE A  
Sbjct: 5   RIICNFAFQSQIMKKRIL-----IGICAALLCTSCAHEYNQVYKTTNNDYK---YEFAKE 56

Query: 67  FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
              +  +  A                A++ L M    +Y    YQ A+   ++Y   YP 
Sbjct: 57  CFAKGKYGFAVPLLQDLVTVEKGTDNAQECLYMLGMAEYGLKDYQAASETFKKYYQTYPR 116

Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
            +  +   + +G S  +   +   DQ  T   +      ++ Y N      A+  +   +
Sbjct: 117 GQYAEMASFYIGQSLFEGTPEPRLDQTPTVAAIAAFQDYLDIYPNGKLKGTAQQRLFDLQ 176

Query: 187 NQLAAKEVEIGRYYLKRG-----------EYVAAIPRFQLVLANYSDAEHAEE-AMARLV 234
           ++L  KE    + Y   G            Y A I   Q  L +Y  +   E+ A+  + 
Sbjct: 177 DKLIRKEYLSAKLYYNLGSYFGNCTSGGNNYEACIITAQNALNDYPYSNMREDFAVLVMK 236

Query: 235 EAYVALALMDEAREVVSL---------IQERYPQGYWARYVETLVK 271
             Y    +  EA+++                YP     +  E  +K
Sbjct: 237 SKYELAQMSVEAKKLQRFQDAEDECYGFINEYPDSKERKTAEEYIK 282


>gi|291515357|emb|CBK64567.1| DNA uptake lipoprotein [Alistipes shahii WAL 8301]
          Length = 249

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 40/225 (17%), Positives = 92/225 (40%), Gaps = 10/225 (4%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
              +Y KA+ + +++ + +A   F      +  +         +A  +Y    +  A++L
Sbjct: 10  PELIYSKALEYYQKEKWQRASTLFEGVQHYYTGSSREDSISFFNARCKYKNRDFDTASTL 69

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            +++  ++  S  ++    +  + +  +      DQ  T   L  ++  + RY  S  V+
Sbjct: 70  LDDFRRKFGRSAFIEDAEGMYALCFYYLSPGPSRDQTMTGHALIAINEFMSRYPQSDRVE 129

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
             R   T    +L  K       Y K G+Y +AI  F+  L  Y +++  EE M  +V++
Sbjct: 130 NFRKINTELTERLHEKAYLNAYTYYKTGKYKSAIVAFKNALKQYPESKRREEIMYLIVDS 189

Query: 237 YVALALM----DEAREVVSLI------QERYPQGYWARYVETLVK 271
              LA       +    +S++      +E +P+    + ++ + +
Sbjct: 190 GYRLASNSISEKQTDRYLSMLDSYLSFKEEFPESTHIKSLDRMAQ 234



 Score = 43.6 bits (102), Expect = 0.034,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 3/98 (3%)

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM-IRDVPYDQ 152
            K+ L  A+  Y  GKY+ A    +  + QYPESK  + + YL+  S  ++    +   Q
Sbjct: 144 EKAYLN-AYTYYKTGKYKSAIVAFKNALKQYPESKRREEIMYLIVDSGYRLASNSISEKQ 202

Query: 153 RATKLM-LQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
               L  L       E +  S ++K         R+ L
Sbjct: 203 TDRYLSMLDSYLSFKEEFPESTHIKSLDRMAQQARDYL 240


>gi|194335029|ref|YP_002016889.1| TPR repeat-containing protein [Prosthecochloris aestuarii DSM 271]
 gi|194312847|gb|ACF47242.1| Tetratricopeptide TPR_2 repeat protein [Prosthecochloris aestuarii
           DSM 271]
          Length = 301

 Score =  101 bits (253), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 37/247 (14%), Positives = 79/247 (31%), Gaps = 54/247 (21%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM-------SAFVQYSAGKYQQA 113
           Y  A   ++++ + +A                A ++  M        A   Y + +Y  A
Sbjct: 44  YSYARQLVEKEKYDRAIIELESLM-------FASRATTMEDDVLFSLADSYYQSEQYLLA 96

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
             + +  + Q P S       +++  S+ ++  D   DQ  T+  ++     ++ Y    
Sbjct: 97  IEIYKRLLEQTPGSLYAPEAQFMLAKSHMELSPDYARDQEHTRKAIREFQLYLDLYPQRQ 156

Query: 174 YVKG----------------------------------------ARFYVTVGRNQLAAKE 193
                                                       ++  + + R +LA   
Sbjct: 157 EASDLADDIEVLKGLIQLNPDNAAYRSKLALALSESERLGRIQESQKNIALLREKLAENT 216

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
             I   Y+K  +Y AA   ++ +L  Y D  + E+A    + A +      EAR  +   
Sbjct: 217 FAIAERYVKLDQYRAAEVFYEDILRFYPDTPYFEKAWTGKIMALIKRGKWFEARAALEAY 276

Query: 254 QERYPQG 260
             ++P+ 
Sbjct: 277 DRQFPEN 283


>gi|261880701|ref|ZP_06007128.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
 gi|270332473|gb|EFA43259.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
          Length = 277

 Score =  101 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 93/268 (34%), Gaps = 26/268 (9%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            +  +++   L G   +    VY     D RY+   YE A        +++A     +  
Sbjct: 4   LVLIALSTALLFGSCAKEFNQVY--KSPDYRYK---YEYAKECFANGKYTRAATLLQELI 58

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
                   A++SL M A  ++    Y+ AA   ++Y+  YP     +   Y VG S    
Sbjct: 59  IQQKGTTEAQESLYMLAMSEFCNRNYETAAETFKQYVKSYPRGLYSEMASYYVGESLYMS 118

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
             +   DQ +T   +      ++ Y  +     A+  +   +++L  KE+   + Y   G
Sbjct: 119 TPEPRLDQSSTVQAISSYQEYLDLYPGAKLKDQAQQRLFELQDKLVEKELYSAQLYYDLG 178

Query: 205 E-----------YVAAIPRFQLVLANYSDAEHAEE-AMARLVEAYV---------ALALM 243
                       Y A I   Q  L +Y  +   E+ A+  +   Y           +   
Sbjct: 179 AYFGNCSSGGNNYEACIVTAQNALKDYPYSSRREDFAVLIMKSKYELAQQSVESKKIERY 238

Query: 244 DEAREVVSLIQERYPQGYWARYVETLVK 271
            +A +        YP     +  E+ +K
Sbjct: 239 QDAEDECYGFINEYPDSKERKNAESYIK 266


>gi|332664680|ref|YP_004447468.1| outer membrane assembly lipoprotein YfiO [Haliscomenobacter
           hydrossis DSM 1100]
 gi|332333494|gb|AEE50595.1| outer membrane assembly lipoprotein YfiO [Haliscomenobacter
           hydrossis DSM 1100]
          Length = 284

 Score =  100 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 90/246 (36%), Gaps = 10/246 (4%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
           T      V  L+ +   +      + +      + +Y KA+ + + + + K+        
Sbjct: 5   TTILPFLVLSLMSFLLLNGCKSEFEQIRTSGDVKNIYAKALEYYQAEEWQKSQTLLEMII 64

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
            +      A       A+  Y+   Y  A+   + +   Y  S   +   ++   +  Q 
Sbjct: 65  PNVRGTKEAEDVFFKYAYTFYNLQSYTSASYHFKTFANTYGASPLREESEFMSAYAQYQE 124

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
                 DQ  T   ++     V  Y +S  V      +   R++L  K  E G+ Y    
Sbjct: 125 SPTFRLDQGNTGQAIEEFEFFVNSYPDSKRVAECNKLIDQLRSKLETKAFEEGKLYFNLR 184

Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM----------DEAREVVSLIQ 254
            Y +A+  F+ +L ++ + ++AEE    ++ +Y  LA+            E R + +   
Sbjct: 185 YYQSAVSSFENLLKDFPETKNAEEVRLMILRSYYDLAVNSILDKREERFKECRRLAAEFL 244

Query: 255 ERYPQG 260
           ERYP+ 
Sbjct: 245 ERYPKS 250


>gi|258647913|ref|ZP_05735382.1| putative lipoprotein [Prevotella tannerae ATCC 51259]
 gi|260851749|gb|EEX71618.1| putative lipoprotein [Prevotella tannerae ATCC 51259]
          Length = 280

 Score = 99.8 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 48/271 (17%), Positives = 97/271 (35%), Gaps = 27/271 (9%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +  F LTI  +   CFL        +   +D   D  Y+   YE A  +  +  ++++ +
Sbjct: 1   MRNFILTI--AALGCFLFASCGDYDK---VDKTPDYTYK---YEAAKQYFAQGYYNRSAQ 52

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
              Q    F       +SL +      +A  Y  AA+    Y   YP+    +   Y  G
Sbjct: 53  TLQQVISVFKGTEAGEESLFLLGMANLNARNYDAAATYLRRYYQSYPKGLYTEAARYYTG 112

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           M+      +   DQ AT   +      +E +  S +   A+  +   +++L  KE    +
Sbjct: 113 MALYLSTPEPKLDQSATYEAVTEFQNFIETFPTSIFRSQAQDRIFELQDKLVEKEYLSAK 172

Query: 199 YYLK---------RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL------- 242
            Y            G Y A I   +  + ++   +  E+    +++A    A        
Sbjct: 173 LYYDLGDYFLNGGNGNYQACIVTSENAIKDFPYTKRREDFAYLILKAKYEYAKHSVPEKQ 232

Query: 243 ---MDEAREVVSLIQERYPQGYWARYVETLV 270
               ++A +     Q  +P+  + +  + ++
Sbjct: 233 TERYNDAVDEYYGFQSEFPESKYMKEAKDMI 263


>gi|53713909|ref|YP_099901.1| hypothetical protein BF2617 [Bacteroides fragilis YCH46]
 gi|60682118|ref|YP_212262.1| lipoprotein [Bacteroides fragilis NCTC 9343]
 gi|253567098|ref|ZP_04844549.1| lipoprotein [Bacteroides sp. 3_2_5]
 gi|265764255|ref|ZP_06092823.1| lipoprotein [Bacteroides sp. 2_1_16]
 gi|52216774|dbj|BAD49367.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
 gi|60493552|emb|CAH08339.1| conserved hypothetical lipoprotein [Bacteroides fragilis NCTC 9343]
 gi|251944222|gb|EES84731.1| lipoprotein [Bacteroides sp. 3_2_5]
 gi|263256863|gb|EEZ28209.1| lipoprotein [Bacteroides sp. 2_1_16]
 gi|301163588|emb|CBW23139.1| conserved hypothetical lipoprotein [Bacteroides fragilis 638R]
          Length = 267

 Score = 99.4 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 52/262 (19%), Positives = 97/262 (37%), Gaps = 22/262 (8%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            I   +A   L      +     L   TD  Y+   YE A  +  +  ++++    N+  
Sbjct: 5   IIITLLAATVLSSCGEYNK----LLKSTDYEYK---YEAAKNYFAKGQYNRSATLLNELI 57

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
                   A +SL M A   Y+   Y  AA     Y   YP  +  +   +  G +    
Sbjct: 58  TILKGGDKAEESLYMLAMSYYNQKDYSTAAQSFITYFNTYPRGQFSELARFHAGKALFLD 117

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
             +   DQ +T   +Q +   +E Y  S   + A+  +   +++L  KE+   R Y   G
Sbjct: 118 TPEPRLDQSSTYQAIQQLQMFLEYYPQSSRKQEAQNMIFALQDKLVLKELYSARLYYNLG 177

Query: 205 -----EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM-------DEAREVVS- 251
                 Y++ +   Q  L +Y   ++ E+    ++ A   +A+        D  RE V  
Sbjct: 178 NYMGNNYLSCVITAQNALKDYPYTDYREDLSILILRAKYEMAVNSVEDKKMDRYRETVDE 237

Query: 252 --LIQERYPQGYWARYVETLVK 271
               +  +P+  + +  E + K
Sbjct: 238 YYAFKNEFPESKYLKEAERIFK 259


>gi|254446643|ref|ZP_05060119.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
           DG1235]
 gi|198260951|gb|EDY85259.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
           DG1235]
          Length = 369

 Score = 99.4 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 44/190 (23%), Positives = 80/190 (42%), Gaps = 13/190 (6%)

Query: 59  EVYEKAVLFLKE------------QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
           E+Y+ AV  L+             +N  +A +YF +     P++  A  SL+  A     
Sbjct: 142 EMYKIAVARLETHRDKILFVIPGFKNTDRAVQYFERIVAIAPYSDYAPLSLMNVAKAWSD 201

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
                      +  +T YP S      Y  +  ++  +I+   YDQRAT+  + +    +
Sbjct: 202 KNSDSMTIYALDRLVTNYPNSFLTSDAYLKLAQTHYGLIKGPEYDQRATEDAITFFEDFL 261

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR-YYLKRGEYVAAIPRFQLVLANYSDAEH 225
            +Y  + +V  A   ++  +N L+  +V++   YY KR +Y AA   +   +     +  
Sbjct: 262 IQYPENLHVDQAETGLSGAKNILSMSKVKMADFYYYKRSKYDAAKILYNEAITIAPRSTA 321

Query: 226 AEEAMARLVE 235
           AE A  RL +
Sbjct: 322 AELARTRLEK 331



 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/254 (11%), Positives = 80/254 (31%), Gaps = 57/254 (22%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV--------------YEKA 64
           + +  +     IA+  LV     +S+  +         + ++                 A
Sbjct: 11  VTRALIFATLGIALAALVPSGWAASKISWSAETGYTSEEVDLSGLLPEEQQRILNWMNSA 70

Query: 65  VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE-YITQ 123
               ++ ++ +A + + + S+ +P    + +         +   + Q A +  ++ +   
Sbjct: 71  RKAEEKGSYKRALKLYKKVSKRYPKNQYSPE-------AYFRTAQIQLARNSVDKAFEAF 123

Query: 124 YPESKNVDYVY-------------YLVGMSYAQMIRDVPYDQ----RATKLMLQYMSRIV 166
                 + +VY             Y + ++  +  RD         + T   +QY  RIV
Sbjct: 124 N----TIAWVYPNYGSFNETLGEMYKIAVARLETHRDKILFVIPGFKNTDRAVQYFERIV 179

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
                S Y   +               + + + +  +      I     ++ NY ++   
Sbjct: 180 AIAPYSDYAPLSL--------------MNVAKAWSDKNSDSMTIYALDRLVTNYPNSFLT 225

Query: 227 EEAMARLVEAYVAL 240
            +A  +L + +  L
Sbjct: 226 SDAYLKLAQTHYGL 239


>gi|34540927|ref|NP_905406.1| lipoprotein protein [Porphyromonas gingivalis W83]
 gi|34397242|gb|AAQ66305.1| lipoprotein protein, putative [Porphyromonas gingivalis W83]
          Length = 270

 Score = 99.4 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 45/225 (20%), Positives = 83/225 (36%), Gaps = 17/225 (7%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A  F  E+ +SKA          +       + + + A       +   A    +EY
Sbjct: 35  YSYAKKFYNERKYSKAASLLEDVRGIYDGTSEGEQLMFLLAECYLEMRRDADAGICYQEY 94

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
             +YP+    +   Y  G  + +   D   DQ  T L +Q +   ++ + N  Y K A  
Sbjct: 95  YNKYPKGLRAEEARYKAGYCFYEASPDSRLDQSDTYLAIQELQSYLDFFPNGKYAKEAEN 154

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR-----FQLVLANYSDAEHAEEAMARLVE 235
            +   +++LA KE    + Y   G Y+    R      +  L  Y   +H EE +  +++
Sbjct: 155 MLFGLQDKLAYKEYRTAKLYYNLGLYLGNNYRSCIVTAEAALKTYPYTKHREELVFLMLQ 214

Query: 236 A-----------YVALALMDEAREVVSLIQERYPQGYWARYVETL 269
           A            +     D A +  + I E +P G + +  + +
Sbjct: 215 AMYEEASFSVSEKLQTRYRDVADQYFAYINE-FPNGKYLKQAKKI 258


>gi|225850549|ref|YP_002730783.1| hypothetical protein PERMA_0997 [Persephonella marina EX-H1]
 gi|225646376|gb|ACO04562.1| conserved hypothetical protein [Persephonella marina EX-H1]
          Length = 300

 Score = 99.0 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 38/164 (23%), Positives = 65/164 (39%), Gaps = 6/164 (3%)

Query: 63  KAVLFLKEQNFSKAYEYFNQ----CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           K +   K+ ++ +A +   +           A    K+    A   Y   +Y  A    E
Sbjct: 29  KGIQLYKKGDYEEAKDLLKKSIYKVKGL--TADELMKARFYLADSYYREEQYVDAIVEFE 86

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           E IT +P +  +D   Y +  SY ++   V  D    +  L+    ++E Y +S Y   A
Sbjct: 87  ELITLFPTAPFMDEALYKLADSYLKISPGVDRDMSYPEKALEKAEELIENYPDSKYAAKA 146

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
           +  +       A   +EI + Y K G+Y +A   +QL    Y D
Sbjct: 147 KKIIHTVNKMKADHILEIAQLYEKLGKYYSASRYYQLAYDQYED 190



 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 49/120 (40%), Gaps = 15/120 (12%)

Query: 166 VERYTNSPY--VKGARFYVTVGRNQLAAKEVEIGRYY-----LKRGEYVAAIPRFQLVLA 218
           ++ Y    Y   K            L A E+   R+Y      +  +YV AI  F+ ++ 
Sbjct: 31  IQLYKKGDYEEAKDLLKKSIYKVKGLTADELMKARFYLADSYYREEQYVDAIVEFEELIT 90

Query: 219 NYSDAEHAEEAMARLVEAYVA--------LALMDEAREVVSLIQERYPQGYWARYVETLV 270
            +  A   +EA+ +L ++Y+         ++  ++A E    + E YP   +A   + ++
Sbjct: 91  LFPTAPFMDEALYKLADSYLKISPGVDRDMSYPEKALEKAEELIENYPDSKYAAKAKKII 150


>gi|294674052|ref|YP_003574668.1| lipoprotein [Prevotella ruminicola 23]
 gi|294471674|gb|ADE81063.1| putative lipoprotein [Prevotella ruminicola 23]
          Length = 275

 Score = 99.0 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 50/228 (21%), Positives = 76/228 (33%), Gaps = 18/228 (7%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            I  + A   L     + +  VY    TD +     YE A        F +A     +  
Sbjct: 5   IITLACAALLLSSCASEFNS-VYKYGDTDYK-----YEYAKEAFACGKFQQATSLLEELV 58

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
                +  A++ L M    QY    Y  A+   ++Y T YP     +  Y+ VG S  Q 
Sbjct: 59  TIKKGSDEAQECLYMLGMAQYGNLDYDAASETFKKYTTSYPRGTYAELAYFYVGQSLYQS 118

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
             +   DQ  T   +    + ++ Y  S     A+  +     +L  KE      Y   G
Sbjct: 119 APEPRLDQSPTNGAITAYQQFMDLYPESSLRPQAQSRLYELHEKLIQKEYLSAELYYNLG 178

Query: 205 ------------EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
                        Y A I   Q  L NY      E+ M  +++A   L
Sbjct: 179 GYFGNINSNEESNYNACIITAQNCLKNYPYCSIREDLMLLIMKAKFEL 226


>gi|237755666|ref|ZP_04584277.1| lipoprotein [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237692178|gb|EEP61175.1| lipoprotein [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 311

 Score = 99.0 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 41/200 (20%), Positives = 66/200 (33%), Gaps = 11/200 (5%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN--Q 82
            + F I+   +             D    +   +E   K +   K+  + KA E      
Sbjct: 4   FVVFLISGFVIASCA---------DKGQKLYEGQEKLSKGLELYKKGEYKKAREELKNAI 54

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
                       ++    A   Y+  +Y  A    EE+I  +P S  V    Y + MSY 
Sbjct: 55  FKSQGLTPDQIMEARFALADSYYNREEYIDAIVEFEEFIALFPTSPKVPEALYKLAMSYL 114

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
            +  D   D        +    I+  Y NS YVK  +  +       A   + I   Y K
Sbjct: 115 FVSPDYKRDMTYVNKAQEKAEEIISSYPNSKYVKATKEILKKVNEIKAKHTLYIAETYEK 174

Query: 203 RGEYVAAIPRFQLVLANYSD 222
            G+  +A   ++    NY D
Sbjct: 175 YGKPYSASVYYREAYTNYKD 194



 Score = 53.6 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 41/93 (44%), Gaps = 8/93 (8%)

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV-------- 238
           +Q+      +   Y  R EY+ AI  F+  +A +  +    EA+ +L  +Y+        
Sbjct: 63  DQIMEARFALADSYYNREEYIDAIVEFEEFIALFPTSPKVPEALYKLAMSYLFVSPDYKR 122

Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
            +  +++A+E    I   YP   + +  + ++K
Sbjct: 123 DMTYVNKAQEKAEEIISSYPNSKYVKATKEILK 155


>gi|149372318|ref|ZP_01891506.1| TPR repeat protein [unidentified eubacterium SCB49]
 gi|149354708|gb|EDM43271.1| TPR repeat protein [unidentified eubacterium SCB49]
          Length = 266

 Score = 98.7 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 85/218 (38%), Gaps = 6/218 (2%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           IF  + +        +  + +  DS          Y  A        + K+ +   Q   
Sbjct: 4   IFLIVVLSITFASCSEYQKVLAGDSTAKK------YAMADSLYTAGKYLKSVKLMEQIIP 57

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
            +      +K + + A   Y+ G Y  +    E +   YP+S +V    +    SY ++ 
Sbjct: 58  AYRGKPQGQKLMFLYANAYYNLGDYTLSGYQFERFTISYPKSDSVVVAAFRGAKSYYELS 117

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
                DQ  T   L+ +   +  Y ++     A   V+  R++L  K  EI   YL+  +
Sbjct: 118 PVYSLDQADTNKALEKLQGFINNYPDADQRVEANEMVSDLRSKLDYKAFEIAEQYLRISD 177

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
           Y AAI  +   +AN+  +E+ ++A    ++A   LA+ 
Sbjct: 178 YKAAISAYDNFIANHPGSEYRKDAFYGRLKASYELAIN 215


>gi|315023899|gb|EFT36901.1| lipoprotein protein, putative [Riemerella anatipestifer RA-YM]
          Length = 270

 Score = 98.7 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 45/223 (20%), Positives = 83/223 (37%), Gaps = 14/223 (6%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           + A     ++ + +A   + +          A   L  SA+  Y   +Y+ A    +++ 
Sbjct: 11  KTANEMYTKKKWKEALSLYERVQNLISGTDEASDILFKSAYANYYDKQYRIAGHQFKKF- 69

Query: 122 TQYP---ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           +           +   Y+  + Y Q   D   DQ+ T+L +  +   +  Y NS   K  
Sbjct: 70  SVNSALATDPRKEEAAYMSAICYYQGSMDYNLDQKDTELAINELQSFLNNYPNSERAKNI 129

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
              +     +L  K  E  R Y K  E  +AI  F+ VL ++   +   +    L++A  
Sbjct: 130 NELIDELSYKLEFKAYENARQYYKMLELKSAIISFENVLDDFPSTKLRPKIETMLMDAKA 189

Query: 239 ALALM----------DEAREVVSLIQERYPQGYWARYVETLVK 271
            LA+           + A     L+++ YP    A+   TL K
Sbjct: 190 KLAIDSKFELKRERLEHAVAYTHLMEKNYPDTDIAKTAVTLRK 232


>gi|281422446|ref|ZP_06253445.1| putative lipoprotein [Prevotella copri DSM 18205]
 gi|281403509|gb|EFB34189.1| putative lipoprotein [Prevotella copri DSM 18205]
          Length = 291

 Score = 98.3 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 49/259 (18%), Positives = 86/259 (33%), Gaps = 27/259 (10%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           LT+  S     L     + ++ +     T        YE A     +  +S+A     + 
Sbjct: 7   LTLIASCVALLLSSCAHEYNQVLKSGDYTYK------YEYAKQSYAQGKYSRAIPLLQEL 60

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
                 +    + L M A  +Y    Y+ AA   ++Y + YP+ K  +   Y VG S  Q
Sbjct: 61  VTMKKGSTEGEECLYMLAMAEYGMKDYETAAEYFKKYYSSYPKGKFAENAKYFVGESLYQ 120

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
              +   DQ  T   +      ++ Y ++   + A   +   ++ L  KE +  + Y   
Sbjct: 121 NAPEPRLDQSTTITAIAAFQEFLDLYPDARLKQQATNRLFALQDLLVEKEYKSAKLYFDM 180

Query: 204 G-----------EYVAAIPRFQLVLANYSDAEHAEE----------AMARLVEAYVALAL 242
           G            Y A I   Q  L +Y  +   EE           +A++      L  
Sbjct: 181 GTYFGNCTSGGNNYEACIVTAQNALKDYPYSNRREEFASLIMKGKYELAKMSVEKKQLER 240

Query: 243 MDEAREVVSLIQERYPQGY 261
             +A +        YP   
Sbjct: 241 YQDAEDECYGFINEYPDSK 259


>gi|313206826|ref|YP_004046003.1| outer membrane assembly lipoprotein yfio [Riemerella anatipestifer
           DSM 15868]
 gi|312446142|gb|ADQ82497.1| outer membrane assembly lipoprotein YfiO [Riemerella anatipestifer
           DSM 15868]
 gi|325335735|gb|ADZ12009.1| YfiO [Riemerella anatipestifer RA-GD]
          Length = 294

 Score = 98.3 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 47/242 (19%), Positives = 88/242 (36%), Gaps = 14/242 (5%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
           S +   D       +  + + A     ++ + +A   + +          A   L  SA+
Sbjct: 16  SCNRQYDLAMKSADKDLILKTANEMYTKKKWKEALSLYERVQNLISGTDEASDILFKSAY 75

Query: 103 VQYSAGKYQQAASLGEEYITQYP---ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
             Y   +Y+ A    +++ +           +   Y+  + Y Q   D   DQ+ T+L +
Sbjct: 76  ANYYDKQYRIAGHQFKKF-SVNSALATDPRKEEAAYMSAICYYQGSMDYNLDQKDTELAI 134

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
             +   +  Y NS   K     +     +L  K  E  R Y K  E  +AI  F+ VL +
Sbjct: 135 NELQSFLNNYPNSERAKNINELIDELSYKLEFKAYENARQYYKMLELKSAIISFENVLDD 194

Query: 220 YSDAEHAEEAMARLVEAYVALALM----------DEAREVVSLIQERYPQGYWARYVETL 269
           +   +   +    L++A   LA+           + A     L+++ YP    A+   TL
Sbjct: 195 FPSTKLRPKIETMLMDAKAKLAIDSKFELKRERLEHAVAYTHLMEKNYPDTDIAKTAVTL 254

Query: 270 VK 271
            K
Sbjct: 255 RK 256


>gi|255009577|ref|ZP_05281703.1| lipoprotein [Bacteroides fragilis 3_1_12]
 gi|313147354|ref|ZP_07809547.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313136121|gb|EFR53481.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 267

 Score = 98.3 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 53/262 (20%), Positives = 97/262 (37%), Gaps = 22/262 (8%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            I   +A   L      +     L   TD  Y+   YE A  +  +  ++++    N+  
Sbjct: 5   IIITLLAATVLSSCGEYNK----LLKSTDYEYK---YEAAKNYFAKGQYNRSATLLNELI 57

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
                   A +SL M A   Y+   Y  AA     Y   YP  +  +   +  G +    
Sbjct: 58  TILKGTDKAEESLYMLAMSYYNQKDYSTAAQSFITYFNTYPRGQFSELARFHAGKALYLD 117

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
             +   DQ +T   +Q +   +E Y  S   + A+  +   +++L  KE+   R Y   G
Sbjct: 118 TPEPRLDQSSTYQAIQQLQMFLEYYPQSSRKQEAQNMIFALQDKLVLKELLSARLYYNLG 177

Query: 205 EYV-----AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM-------DEAREVVS- 251
            Y+     + +   Q  L +Y   ++ EE    ++ A   +A+        D  RE V  
Sbjct: 178 NYLGNNFMSCVITAQNALKDYPYTDYREELSILILRAKYEMAVNSVEDKKMDRYRETVDE 237

Query: 252 --LIQERYPQGYWARYVETLVK 271
               +  +P+  + +  E + K
Sbjct: 238 YYAFKNEFPESKYLKEAEKIFK 259


>gi|218130941|ref|ZP_03459745.1| hypothetical protein BACEGG_02543 [Bacteroides eggerthii DSM 20697]
 gi|317476252|ref|ZP_07935503.1| outer membrane assembly lipoprotein YfiO [Bacteroides eggerthii
           1_2_48FAA]
 gi|217987285|gb|EEC53616.1| hypothetical protein BACEGG_02543 [Bacteroides eggerthii DSM 20697]
 gi|316907663|gb|EFV29366.1| outer membrane assembly lipoprotein YfiO [Bacteroides eggerthii
           1_2_48FAA]
          Length = 267

 Score = 98.3 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 82/226 (36%), Gaps = 15/226 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YE A  +  +  +++A    N+          A +SL M     Y+   YQ AA    +Y
Sbjct: 34  YEAAKNYFAKGQYNRAATLLNELIAILKGTDKAEESLYMLGMSYYNQNDYQTAAQTFTQY 93

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
              YP     +   +  G +      +   DQ  T   +Q +   +E + NS     A+ 
Sbjct: 94  YNVYPRGTFTELARFHAGKALYLDTPEPRLDQSGTYNAIQQLQMFLEYFPNSAKKDEAQN 153

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYV-----AAIPRFQLVLANYSDAEHAEEAMARLVE 235
            +   +++L  KE    + Y   G Y+     + +   Q  L +Y      E+    ++ 
Sbjct: 154 MIFALQDKLVMKEYLSAKLYYNLGNYLGNNYESCVITAQNALKDYPYTNMREDLSILILR 213

Query: 236 AYVALAL----------MDEAREVVSLIQERYPQGYWARYVETLVK 271
           A   +A+            EA +     +  +P+  + +  + + K
Sbjct: 214 AKYEMAVFSVEDKREERYREAVDEYYAFKNEFPESKYMKDADRIFK 259


>gi|260592313|ref|ZP_05857771.1| putative lipoprotein [Prevotella veroralis F0319]
 gi|260535763|gb|EEX18380.1| putative lipoprotein [Prevotella veroralis F0319]
          Length = 274

 Score = 97.9 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 45/266 (16%), Positives = 84/266 (31%), Gaps = 24/266 (9%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
            F I +C  +     +     +   TD  Y+   YE A     +  +  A          
Sbjct: 4   SFLIGICVALLLTSCAHEYNQVYKTTDNNYK---YEFAKECFAKGKYGFAVPLLQDLVTI 60

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
                 A + L M A  +Y    Y+ A+   ++Y   YP  +  +   + +G S  +   
Sbjct: 61  EKGTDNAEECLYMLAMGEYGLKDYEAASETFKKYYQTYPRGRYAEMASFYIGQSLFEGTP 120

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG-- 204
           +   DQ  T   +      ++ +        A+  +   +++L  KE    + Y   G  
Sbjct: 121 EARLDQTPTIAAIAAFQDYLDIFPEGKMKSTAQQRLFDLQDKLIRKEYLNAKLYYNLGSY 180

Query: 205 ---------EYVAAIPRFQLVLANYSDAEHAEE-AMARLVEAYV---------ALALMDE 245
                     Y A I   Q  L +Y  +   E+ ++  +   Y           L    +
Sbjct: 181 FGNCTSGGNNYEACIITAQNALNDYPYSNLREDFSILIMKSKYELAQMSVESKKLQRYQD 240

Query: 246 AREVVSLIQERYPQGYWARYVETLVK 271
           A +        YP     +  E  +K
Sbjct: 241 AEDECYGFINEYPNSKERKTAEDFIK 266


>gi|298208455|ref|YP_003716634.1| lipoprotein protein, putative [Croceibacter atlanticus HTCC2559]
 gi|83848378|gb|EAP86247.1| lipoprotein protein, putative [Croceibacter atlanticus HTCC2559]
          Length = 277

 Score = 97.9 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/219 (20%), Positives = 71/219 (32%), Gaps = 2/219 (0%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLK--EQNFSKAYEYFNQCS 84
           F  + +                D           YE+A    K  +  + KA + F Q  
Sbjct: 11  FTLLTIILFSSCSEYQKALKNDDIAKKYELGISYYEQAQDGAKRPKAKYRKAIKLFEQIL 70

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
             +       K   + A   Y    Y  +    E +   YP+S  V+   +    SY + 
Sbjct: 71  PQYRGKPQGEKLAFVYANSYYELEDYFLSGYQFERFTKAYPDSDRVEEAAFKSARSYYEG 130

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
                 DQ  T   L  +      Y    +++ A    T    +L  K  EI + Y    
Sbjct: 131 SPRYSLDQADTDKALDKLQLYFVTYPEGQFIEEANVMATELGQKLEKKAYEIAKQYHHTE 190

Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
            Y  AI  F   L +Y  + + E+A+    E+   LA+ 
Sbjct: 191 NYKPAIEAFDNYLVDYPGSSYREKAIYYKFESAYLLAIN 229


>gi|300727771|ref|ZP_07061154.1| outer membrane assembly lipoprotein YfiO [Prevotella bryantii B14]
 gi|299774966|gb|EFI71575.1| outer membrane assembly lipoprotein YfiO [Prevotella bryantii B14]
          Length = 281

 Score = 97.9 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 46/229 (20%), Positives = 81/229 (35%), Gaps = 21/229 (9%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YE A        +SKA     +          A++SL M A  +Y    Y+ A+   ++Y
Sbjct: 35  YEYAKEMFANGKYSKAVALLQELVTLEKGTENAQESLYMLAMSEYCLKDYETASEYFKKY 94

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
            + YP     +   Y VG S      +   DQ  T   +      ++ Y +      A+ 
Sbjct: 95  FSSYPHGTYSEMAEYYVGQSLFMSTPEPRLDQSGTIAAISAFQEYLDVYPDGKMKPTAQK 154

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRG-----------EYVAAIPRFQLVLANYSDAEHAEEA 229
            +   +++L  KE+   R Y   G            Y A +   Q  L +Y  +++ EE 
Sbjct: 155 RLFELQDKLVLKELYNARLYYNLGSYFGNCTNGGNNYEACVITSQNALKDYPYSDNREEF 214

Query: 230 MARLVEAYVALALM----------DEAREVVSLIQERYPQGYWARYVET 268
              ++++   LA M           +A +        YP     +  E+
Sbjct: 215 ATLIMKSKFELAKMSVDERKYERFQDAEDECYGFINEYPDSKERKTAES 263


>gi|270297061|ref|ZP_06203260.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270273048|gb|EFA18911.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 272

 Score = 97.5 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/226 (19%), Positives = 82/226 (36%), Gaps = 15/226 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YE A  +  +  +++A    N+          A +SL M     Y+   YQ AA    +Y
Sbjct: 34  YEAAKNYFAKGQYNRAATLLNELIAILKGTDKAEESLYMLGMSYYNQKDYQTAAQTFIQY 93

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
              YP     +   +  G +      +   DQ  T   +Q +   +E +  S   + A+ 
Sbjct: 94  YNVYPRGTFTELARFHAGKALYLDTPEPRLDQSGTYSAIQQLQMFMEYFPQSSKKEEAQN 153

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYV-----AAIPRFQLVLANYSDAEHAEEAMARLVE 235
            +   +++L  KE    + Y   G Y+     A +   Q  L +Y      E+    ++ 
Sbjct: 154 MIFALQDKLVMKEYLSAKLYYNMGNYLGNNYQACVITAQNALKDYPYTNLREDLSILILR 213

Query: 236 AYVALAL----MDEAREVVSLIQERY------PQGYWARYVETLVK 271
           A   LA+       A      + E Y      P+  + + V+ + K
Sbjct: 214 AKYELAVYSVEDKRAERYREAVDECYAFKNEFPESKYMKEVDRIFK 259


>gi|21672858|ref|NP_660923.1| hypothetical protein CT0017 [Chlorobium tepidum TLS]
 gi|21645907|gb|AAM71265.1| hypothetical protein CT0017 [Chlorobium tepidum TLS]
          Length = 382

 Score = 97.5 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 46/279 (16%), Positives = 89/279 (31%), Gaps = 48/279 (17%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQC 83
           ++   +     +     S         T      E+ Y +A   + ++ ++ A       
Sbjct: 82  SVLRILPGLLCLALPLSSCSSSKSPKATMTATPVELRYREATEKIAKRKYNDAIVILESL 141

Query: 84  SRDFPFAGVAR----KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
                F+  A       L   A   Y   +Y  AA      + Q P+S       +++  
Sbjct: 142 M----FSTRATALEDDVLKALADSYYKKKEYILAADTYRRLLQQTPDSPYARDAQFMLAK 197

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYT-----------------------NSPY-- 174
           SY ++      DQ  T   +      +++Y                        N+ Y  
Sbjct: 198 SYEKLSPFHELDQEYTVKAINEFETYLDQYPSDDSAQAANDLELYKNLMKVNPDNASYRE 257

Query: 175 --------------VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
                          + ++  ++  R +LA     I R Y K  +Y AA   + +V+  Y
Sbjct: 258 KYEAAKEELASGSPARYSQKAISELRERLAHNRFSIARQYFKLKKYRAAEIFYDVVINQY 317

Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            D +  E A    +++ +      EAR+ +   Q+ YP 
Sbjct: 318 PDTKWLESAWIGKIDSEIKQNNWFEARQSIETFQQLYPD 356


>gi|167762889|ref|ZP_02435016.1| hypothetical protein BACSTE_01253 [Bacteroides stercoris ATCC
           43183]
 gi|167699229|gb|EDS15808.1| hypothetical protein BACSTE_01253 [Bacteroides stercoris ATCC
           43183]
          Length = 267

 Score = 97.5 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 82/226 (36%), Gaps = 15/226 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YE A  +  +  +S+A    N+          A +SL M     Y+   YQ AA    +Y
Sbjct: 34  YEAAKNYFAKGQYSRAATLLNELIAILKGTDKAEESLYMLGMSYYNQKDYQTAAQTFTQY 93

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
              YP     +   +  G +      +   DQ  T   +Q +   +E + +S     A+ 
Sbjct: 94  YNVYPRGTFTELARFHAGKALFLDTPEPRLDQSGTYSAIQQLQMFLEYFPDSSKKDEAQS 153

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYV-----AAIPRFQLVLANYSDAEHAEEAMARLVE 235
            +   +++L  KE    + Y   G Y+     + +   Q  L +Y      E+    ++ 
Sbjct: 154 MIFALQDKLVMKEYLSAKLYYNLGNYLGNNYESCVITAQNALKDYPYTNMREDLSILILR 213

Query: 236 AYVALALMD----------EAREVVSLIQERYPQGYWARYVETLVK 271
           A   +A+            EA +     +  +P+  + +  + + K
Sbjct: 214 AKYEMAVYSVEDKRAERYREAVDEYYAFKNEFPESKYMKDADRIFK 259


>gi|160888159|ref|ZP_02069162.1| hypothetical protein BACUNI_00567 [Bacteroides uniformis ATCC 8492]
 gi|317478939|ref|ZP_07938086.1| outer membrane assembly lipoprotein YfiO [Bacteroides sp. 4_1_36]
 gi|156862294|gb|EDO55725.1| hypothetical protein BACUNI_00567 [Bacteroides uniformis ATCC 8492]
 gi|316904916|gb|EFV26723.1| outer membrane assembly lipoprotein YfiO [Bacteroides sp. 4_1_36]
          Length = 272

 Score = 97.1 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/226 (19%), Positives = 83/226 (36%), Gaps = 15/226 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YE A  +  +  +++A    N+          A +SL M     Y+   YQ AA    +Y
Sbjct: 34  YEAAKNYFAKGQYNRAATLLNELIAILKGTDKAEESLYMLGMSYYNQKDYQTAAQTFIQY 93

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
              YP     +   +  G +      +   DQ  T   +Q +   +E +  S   + A+ 
Sbjct: 94  YNVYPRGTFTELARFHAGKALYLDTPEPRLDQSGTYSAIQQLQMFMEYFPQSSKKEEAQN 153

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYV-----AAIPRFQLVLANYSDAEHAEEAMARLVE 235
            +   +++L  KE    + Y   G Y+     A +   Q  L +Y      E+    ++ 
Sbjct: 154 MIFALQDKLVMKEYLSAKLYYNMGNYLGNNYQACVITAQNALKDYPYTNLREDLSILILR 213

Query: 236 AYVALALMD----------EAREVVSLIQERYPQGYWARYVETLVK 271
           A   LA+            EA +     +  +P+  + + V+ + K
Sbjct: 214 AKYELAVYSVEDRRAERYREAVDECYAFKNEFPESKYMKEVDRIFK 259


>gi|229495750|ref|ZP_04389478.1| putative lipoprotein protein [Porphyromonas endodontalis ATCC
           35406]
 gi|229317324|gb|EEN83229.1| putative lipoprotein protein [Porphyromonas endodontalis ATCC
           35406]
          Length = 276

 Score = 97.1 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 47/269 (17%), Positives = 96/269 (35%), Gaps = 22/269 (8%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           ++ K  +T F  +    +      +      D+          Y+ A  +  ++ +SKA 
Sbjct: 5   KIVKLLVTGFLMLFSLLISSCGEMARIQKSNDTSLK-------YDYAKKYFNQKKWSKAS 57

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           E        +       ++L M    + +      AA     Y T YP+    +   +  
Sbjct: 58  ELLVDVVPAYEGTSEGAQALYMLGISELALEHGDIAAESFRRYYTNYPKGAKAEESRFRA 117

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
           G ++     +   DQ  T   +Q +   +E Y  S Y K A   +   +++LA KE++  
Sbjct: 118 GEAFYISSPEAQLDQNVTYTAIQELQTFIELYPTSDYRKDAERMLFDLQDKLAYKELKSA 177

Query: 198 RYYLKRG-----EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM----DEARE 248
             Y   G      Y +A+      L +Y  ++  E+    ++ A    A+      +   
Sbjct: 178 TLYYDMGMYLGNNYQSAVVTANNALKDYPYSKWREDFYILILRATYQEAINSVVSKQQER 237

Query: 249 VVSLIQE------RYPQGYWARYVETLVK 271
             ++I         +PQG + +  + + K
Sbjct: 238 YRNVIDRYFAYVNEFPQGKYTKEADRIYK 266


>gi|329955048|ref|ZP_08296029.1| outer membrane assembly lipoprotein YfiO [Bacteroides clarus YIT
           12056]
 gi|328526338|gb|EGF53353.1| outer membrane assembly lipoprotein YfiO [Bacteroides clarus YIT
           12056]
          Length = 267

 Score = 96.7 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 81/226 (35%), Gaps = 15/226 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YE A  +  +  +++A    N+          A +SL M     Y+   YQ AA    +Y
Sbjct: 34  YEAAKNYFAKGQYNRAATLLNELIAILKGTDKAEESLYMLGMSYYNQKDYQTAAQTFTQY 93

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
              YP     +   +  G +      +   DQ  T   +Q +   +E + NS     A+ 
Sbjct: 94  YNVYPRGTFTELARFHAGKALYLDTPEPRLDQSGTYSAIQQLQMFLEYFPNSAKKDEAQS 153

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYV-----AAIPRFQLVLANYSDAEHAEEAMARLVE 235
            +   +++L  KE    + Y   G Y+     + +   Q  L +Y      E+    ++ 
Sbjct: 154 MIFTLQDKLVMKEYLSAKLYYNLGNYLGNNYESCVITAQNALKDYPYTNMREDLSILILR 213

Query: 236 AYVALAL----MDEAREVVSLIQE------RYPQGYWARYVETLVK 271
           A   +A+       A      + E       +P+  + +  + + K
Sbjct: 214 AKYEMAVYSVEDKRAERYRETVDEYYAFKNEFPESKYMKDADRIFK 259


>gi|329964889|ref|ZP_08301897.1| outer membrane assembly lipoprotein YfiO [Bacteroides fluxus YIT
           12057]
 gi|328524530|gb|EGF51598.1| outer membrane assembly lipoprotein YfiO [Bacteroides fluxus YIT
           12057]
          Length = 267

 Score = 96.3 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 44/226 (19%), Positives = 83/226 (36%), Gaps = 15/226 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YE A  +  +  +++A    N+          A +SL M     Y+   YQ AA    +Y
Sbjct: 34  YEAAKTYFAKGQYNRAATLLNELIAILKGTDKAEESLYMLGMSYYNQKDYQTAAQTFIQY 93

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
              YP     +   +  G +      +   DQ  T   +Q +   +E +  S   + A+ 
Sbjct: 94  YNVYPRGTFTELARFHAGKALYLDTPEPRLDQSGTYSAIQQLQMFMEYFPQSAKKEEAQN 153

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYV-----AAIPRFQLVLANYSDAEHAEEAMARLVE 235
            +   +++L  KE    + Y   G Y+     A +   Q  L +Y      E+    ++ 
Sbjct: 154 MIFALQDKLVMKEYLSAKLYYNLGNYLGNNYQACVITAQNALKDYPYTNLREDLSILVLR 213

Query: 236 AYVALALMD----------EAREVVSLIQERYPQGYWARYVETLVK 271
           A   LA+            EA +     +  +P+  +++  E + K
Sbjct: 214 AKYELAVYSVEEKKPERYREAVDEYYAFKNEFPESKYSKEAERIFK 259


>gi|29345983|ref|NP_809486.1| hypothetical protein BT_0573 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|253568616|ref|ZP_04846027.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|298387378|ref|ZP_06996931.1| hypothetical protein HMPREF9007_04151 [Bacteroides sp. 1_1_14]
 gi|29337877|gb|AAO75680.1| lipoprotein protein, putative [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|251842689|gb|EES70769.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|298260047|gb|EFI02918.1| hypothetical protein HMPREF9007_04151 [Bacteroides sp. 1_1_14]
          Length = 267

 Score = 96.3 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 50/260 (19%), Positives = 94/260 (36%), Gaps = 22/260 (8%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            I   +A   L      +     L   TD  Y+   YE A  +  +  ++++    N+  
Sbjct: 5   IIITLLAAASLTSCGEYNK----LLKSTDYEYK---YEAAKNYFAKGQYNRSATLLNELI 57

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
                   A +SL M     Y+   YQ AA     Y   YP     +   +  G S    
Sbjct: 58  TILKGTDKAEESLYMLGMSYYNQKDYQTAAQTFITYFNTYPRGTFTELARFHAGKSLFLD 117

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
             +   DQ +T   +Q +   +E + NS   + A+  +   +++L  KE+   + Y   G
Sbjct: 118 TPEPRLDQSSTYQAIQQLQMFMEYFPNSTKKQEAQDMIFALQDKLVLKELYSAKLYYNLG 177

Query: 205 EYV-----AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL----MDEAREVVSLIQE 255
            Y+     + +   Q  L +Y   ++ EE    ++ A   +A+      +       I E
Sbjct: 178 NYLGNNYESCVITAQNALKDYPYTDYREELSILILRARHEMAIYSVEDKKMDRYRETIDE 237

Query: 256 ------RYPQGYWARYVETL 269
                  +P+  + +  E +
Sbjct: 238 YYAFKNEFPESKYLKEAEKI 257


>gi|288803852|ref|ZP_06409278.1| lipoprotein [Prevotella melaninogenica D18]
 gi|288333686|gb|EFC72135.1| lipoprotein [Prevotella melaninogenica D18]
          Length = 274

 Score = 96.0 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 47/265 (17%), Positives = 91/265 (34%), Gaps = 24/265 (9%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
             I +C ++     +     +   T+  Y+   YE A     +  +  A           
Sbjct: 5   ILIGLCAVLLLTSCAHEYNQVYKTTNNDYK---YEFAKECFAKGKYGFAVPLLQDLVTIE 61

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
                A++ L M A  +YS   YQ A+   ++Y   YP  +  +   + +G S  +   +
Sbjct: 62  KGTDNAQECLYMLAMAEYSLKDYQAASETFKKYYQTYPRGQYAEMASFYIGQSLFEGTPE 121

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG--- 204
              DQ  T   +      ++ + N    + A+  +   +++L  KE    + Y   G   
Sbjct: 122 PRLDQTPTVAAIAAFQEYLDIFPNGKMKETAQQRLFSLQDKLVRKEYLNAKLYYNLGSYF 181

Query: 205 --------EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM----------DEA 246
                    Y A I   Q  L +Y  ++  E     ++++   LA M           +A
Sbjct: 182 GNCTSGGNNYEACIITAQNALNDYPYSDLRENFAILIMKSKFELAQMSVEEKKVQRFQDA 241

Query: 247 REVVSLIQERYPQGYWARYVETLVK 271
            +        YP+    +  E  +K
Sbjct: 242 EDECYGFINEYPESKERKTAEDYIK 266


>gi|153806675|ref|ZP_01959343.1| hypothetical protein BACCAC_00945 [Bacteroides caccae ATCC 43185]
 gi|149131352|gb|EDM22558.1| hypothetical protein BACCAC_00945 [Bacteroides caccae ATCC 43185]
          Length = 267

 Score = 96.0 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 95/260 (36%), Gaps = 22/260 (8%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            I   +A   L      +     L   TD  Y+   YE A  +  +  ++++    N+  
Sbjct: 5   IIITLLAAATLTSCGEYNK----LLKSTDYEYK---YEAAKNYFAKGQYNRSATLLNELI 57

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
                   A +SL M     Y+   YQ AA     Y   YP     +   +  G +    
Sbjct: 58  TILKGTDKAEESLYMLGMSYYNQKDYQTAAQTFITYFNTYPRGTFTELARFHAGKALFLD 117

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
             +   DQ +T   +Q +   +E + NS   + A+  +   +++L  KE+   + Y   G
Sbjct: 118 TPEPRLDQSSTYQAIQQLQMFMEYFPNSVKKQEAQDMIFALQDKLVLKELYSAKLYYNLG 177

Query: 205 EYV-----AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL----MDEAREVVSLIQE 255
            Y+     + +   Q  L +Y   ++ EE    ++ A   +A+      +A      + E
Sbjct: 178 NYMGNNYESCVITAQNALKDYPYTDYREELSILILRARYEMAIYSVEDKKADRYRETVDE 237

Query: 256 ------RYPQGYWARYVETL 269
                  +P+  + +  E +
Sbjct: 238 YYAFKNEFPESKYLKEAEKI 257


>gi|224539634|ref|ZP_03680173.1| hypothetical protein BACCELL_04542 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224518725|gb|EEF87830.1| hypothetical protein BACCELL_04542 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 271

 Score = 96.0 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 91/262 (34%), Gaps = 22/262 (8%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            +   +A   L      +     L   TD  Y+   YE A  +  +  +++A    N+  
Sbjct: 5   ILITLLAAVLLSSCGEYNK----LLKSTDYEYK---YEAAKNYFAKGQYNRAATLLNELI 57

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
                   A +SL M     Y+   YQ AA    +Y   YP     +   +  G +    
Sbjct: 58  AILKGTDKAEESLYMLGMSYYNQKDYQTAAQTFVQYFNVYPRGTFTELARFHAGKALYLD 117

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
             +   DQ  T   +Q +   +E +  S   + A+  +   +++L  KE    + Y   G
Sbjct: 118 TPEPRLDQSGTYAAIQQLQMFMEYFPQSSKKEEAQDMIFKLQDKLVMKEYLSAKLYYNLG 177

Query: 205 EYV-----AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL----MDEAREVVSLIQE 255
            Y+     + +   Q  L +Y      E+    ++ A   +A+       A      + E
Sbjct: 178 NYLGNNYQSCVITAQNALKDYPYTNLREDLSILILRAKYEMAIYSVEDKRAERYRETVDE 237

Query: 256 ------RYPQGYWARYVETLVK 271
                  +P+  + +  + + K
Sbjct: 238 YYAFKNEFPESKYMKEADRIFK 259


>gi|255691532|ref|ZP_05415207.1| putative lipoprotein [Bacteroides finegoldii DSM 17565]
 gi|260622922|gb|EEX45793.1| putative lipoprotein [Bacteroides finegoldii DSM 17565]
          Length = 267

 Score = 96.0 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 94/260 (36%), Gaps = 22/260 (8%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            I   +A   L      +     L   TD  Y+   YE A  +  +  ++++    N+  
Sbjct: 5   IIITLLAAATLTSCGEYNK----LLKSTDYEYK---YEAAKNYFAKGQYNRSATLLNELI 57

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
                   A +SL M     Y+   YQ AA     Y   YP     +   +  G +    
Sbjct: 58  TILKGTDKAEESLYMLGMSYYNQKDYQTAAQTFITYFNTYPRGTFTELARFHAGKALFLD 117

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
             +   DQ +T   +Q +   +E + NS   + A+  +   +++L  KE+   + Y   G
Sbjct: 118 TPEPRLDQSSTYQAIQQLQMFMEYFPNSSKKQEAQDMIFALQDKLVLKELYSAKLYYNLG 177

Query: 205 EYV-----AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL----MDEAREVVSLIQE 255
            Y+     + +   Q  L +Y   ++ EE    ++ A   +A+      +       I E
Sbjct: 178 NYLGNNYESCVITAQNALKDYPYTDYREELSILILRARYEMAIYSVEDKKMDRYRETIDE 237

Query: 256 ------RYPQGYWARYVETL 269
                  +P+  + +  E +
Sbjct: 238 YYAFKNEFPESKYLKEAEKI 257


>gi|325270799|ref|ZP_08137390.1| hypothetical protein HMPREF9141_2600 [Prevotella multiformis DSM
           16608]
 gi|324986915|gb|EGC18907.1| hypothetical protein HMPREF9141_2600 [Prevotella multiformis DSM
           16608]
          Length = 274

 Score = 95.6 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 81/262 (30%), Gaps = 27/262 (10%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
           AV  L G   +       + V         YE A     +  +  A              
Sbjct: 11  AVLLLTGCAHE------YNQVYKTTNNDYKYEFAKECFTKGKYGFAVPLLQDLVTVEKGT 64

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
             A++ L M    +Y    YQ A+   ++Y   YP  +  +   + +G S  +   +   
Sbjct: 65  DNAQECLYMLGMAEYGLKDYQAASETFKKYYQTYPRGQYAEMASFYIGQSLFEGTPEPRL 124

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG------ 204
           DQ  T   +      ++ Y N      A+  +   +++L  KE    R Y   G      
Sbjct: 125 DQTPTVAAIAAFQDYLDIYPNGKLKGTAQQRLFALQDKLIRKEYLSARLYYNLGSYFGNC 184

Query: 205 -----EYVAAIPRFQLVLANYSDAEHAEE----------AMARLVEAYVALALMDEAREV 249
                 Y A I   Q  L +Y  +   E+           +A++      L    +A + 
Sbjct: 185 TSGGNNYEACIITAQNALNDYPYSNMREDFAVLVMKSKFELAQMSVEAKKLQRFQDAEDE 244

Query: 250 VSLIQERYPQGYWARYVETLVK 271
                  YP     +  E  ++
Sbjct: 245 CYGFINEYPDSKERKTAEEYIR 266


>gi|189466023|ref|ZP_03014808.1| hypothetical protein BACINT_02387 [Bacteroides intestinalis DSM
           17393]
 gi|189434287|gb|EDV03272.1| hypothetical protein BACINT_02387 [Bacteroides intestinalis DSM
           17393]
          Length = 274

 Score = 95.6 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 43/226 (19%), Positives = 80/226 (35%), Gaps = 15/226 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YE A  +  +  +++A    N+          A +SL M     Y+   YQ AA    +Y
Sbjct: 34  YEAAKNYFAKGQYNRAATLLNELIAILKGTDKAEESLYMLGMSYYNQKDYQTAAQSFVQY 93

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
              YP     +   +  G +      +   DQ  T   +Q +   +E +  S     A+ 
Sbjct: 94  YNVYPRGTFAELARFHAGKALYLDTPEPRLDQSGTYSAIQQLQMFMEYFPQSSKKDEAQD 153

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYV-----AAIPRFQLVLANYSDAEHAEEAMARLVE 235
            +   +++L  KE    R Y   G Y+     + +   Q  L +Y      E+    ++ 
Sbjct: 154 MIFKLQDKLVMKEYLSARMYYNLGNYLGNNYQSCVITAQNALKDYPYTNLREDLSILILR 213

Query: 236 AYVALAL----MDEAREVVSLIQE------RYPQGYWARYVETLVK 271
           A   +A+       A      + E       +P+  + +  E + K
Sbjct: 214 AKYEMAIYSVEDKRAERYRETVDEYYAFKNEFPESKYMKEAEKIFK 259


>gi|160885705|ref|ZP_02066708.1| hypothetical protein BACOVA_03709 [Bacteroides ovatus ATCC 8483]
 gi|237719449|ref|ZP_04549930.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|260174433|ref|ZP_05760845.1| hypothetical protein BacD2_21432 [Bacteroides sp. D2]
 gi|293370226|ref|ZP_06616786.1| outer membrane assembly lipoprotein YfiO [Bacteroides ovatus SD CMC
           3f]
 gi|299146193|ref|ZP_07039261.1| conserved hypothetical protein [Bacteroides sp. 3_1_23]
 gi|315922700|ref|ZP_07918940.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|156108518|gb|EDO10263.1| hypothetical protein BACOVA_03709 [Bacteroides ovatus ATCC 8483]
 gi|229451309|gb|EEO57100.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|292634723|gb|EFF53252.1| outer membrane assembly lipoprotein YfiO [Bacteroides ovatus SD CMC
           3f]
 gi|298516684|gb|EFI40565.1| conserved hypothetical protein [Bacteroides sp. 3_1_23]
 gi|313696575|gb|EFS33410.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 267

 Score = 95.6 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 50/260 (19%), Positives = 94/260 (36%), Gaps = 22/260 (8%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            I   +A   L      +     L   TD  Y+   YE A  +  +  ++++    N+  
Sbjct: 5   IIITLLAAATLTSCGEYNK----LLKSTDYEYK---YEAAKNYFAKGQYNRSATLLNELI 57

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
                   A +SL M     Y+   YQ AA     Y   YP     +   +  G +    
Sbjct: 58  TILKGTDKAEESLYMLGMSYYNQKDYQTAAQTFITYFNTYPRGTFTELARFHAGKALFLD 117

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
             +   DQ +T   +Q +   +E + NS   + A+  +   +++L  KE+   R Y   G
Sbjct: 118 TPEPRLDQSSTYQAIQQLQMFMEYFPNSTKKQEAQDMIFALQDKLVLKELYSARLYYNLG 177

Query: 205 EYV-----AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL----MDEAREVVSLIQE 255
            Y+     + +   Q  L +Y   ++ EE    ++ A   +A+      +       I E
Sbjct: 178 NYLGNNYESCVITAQNALKDYPYTDYREELSILVLRARHEMAIYSVEDKKMDRYRETIDE 237

Query: 256 ------RYPQGYWARYVETL 269
                  +P+  + +  E +
Sbjct: 238 YYAFKNEFPESKYLKEAEKI 257


>gi|237714494|ref|ZP_04544975.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262406359|ref|ZP_06082908.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294643239|ref|ZP_06721065.1| outer membrane assembly lipoprotein YfiO [Bacteroides ovatus SD CC
           2a]
 gi|294806432|ref|ZP_06765273.1| outer membrane assembly lipoprotein YfiO [Bacteroides xylanisolvens
           SD CC 1b]
 gi|298482860|ref|ZP_07001043.1| hypothetical protein HMPREF0106_03328 [Bacteroides sp. D22]
 gi|229445263|gb|EEO51054.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262355062|gb|EEZ04153.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292641362|gb|EFF59554.1| outer membrane assembly lipoprotein YfiO [Bacteroides ovatus SD CC
           2a]
 gi|294446295|gb|EFG14921.1| outer membrane assembly lipoprotein YfiO [Bacteroides xylanisolvens
           SD CC 1b]
 gi|295083909|emb|CBK65432.1| outer membrane assembly lipoprotein YfiO [Bacteroides xylanisolvens
           XB1A]
 gi|298271060|gb|EFI12638.1| hypothetical protein HMPREF0106_03328 [Bacteroides sp. D22]
          Length = 267

 Score = 95.2 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 52/260 (20%), Positives = 96/260 (36%), Gaps = 22/260 (8%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            I   +A   L      +     L   TD  Y+   YE A  +  +  ++++    N+  
Sbjct: 5   IIITLLAAATLTSCGEYNK----LLKSTDYEYK---YEAAKNYFAKGQYNRSATLLNELI 57

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
                   A +SL M     Y+   YQ AA     Y   YP     +   +  G +    
Sbjct: 58  TILKGTDKAEESLYMLGMSYYNQKDYQTAAQTFITYFNTYPRGTFTELARFHAGKALFLD 117

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
             +   DQ +T   +Q +   +E + NS   + A+  +   +++L  KE+   R Y   G
Sbjct: 118 TPEPRLDQSSTYQAIQQLQMFMEYFPNSTKKQEAQDMIFALQDKLVLKELYSARLYYNLG 177

Query: 205 EYV-----AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM-------DEAREVVS- 251
            Y+     + +   Q  L +Y   ++ EE    ++ A   +A+        D  RE V  
Sbjct: 178 NYLGNNYESCVITAQNALKDYPYTDYREELSILILRARHEMAIYSVEDKKMDRYRETVDE 237

Query: 252 --LIQERYPQGYWARYVETL 269
               +  +P+  + +  E +
Sbjct: 238 YYAFKNEFPESKYLKEAEKI 257


>gi|150007834|ref|YP_001302577.1| hypothetical protein BDI_1192 [Parabacteroides distasonis ATCC
           8503]
 gi|255013465|ref|ZP_05285591.1| hypothetical protein B2_06125 [Bacteroides sp. 2_1_7]
 gi|256840092|ref|ZP_05545601.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|262381665|ref|ZP_06074803.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|298376805|ref|ZP_06986760.1| lipoprotein [Bacteroides sp. 3_1_19]
 gi|301310138|ref|ZP_07216077.1| putative lipoprotein [Bacteroides sp. 20_3]
 gi|149936258|gb|ABR42955.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
           8503]
 gi|256739022|gb|EEU52347.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|262296842|gb|EEY84772.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|298266683|gb|EFI08341.1| lipoprotein [Bacteroides sp. 3_1_19]
 gi|300831712|gb|EFK62343.1| putative lipoprotein [Bacteroides sp. 20_3]
          Length = 269

 Score = 95.2 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 46/187 (24%), Positives = 77/187 (41%), Gaps = 5/187 (2%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A  +   + +SK+    ++    F     A +SL + A   Y    YQ A+   E Y
Sbjct: 34  YSYAKKYFNAKQYSKSATLLDELVTIFKGTAYAEESLYLLAQSYYGQKDYQTASQYFETY 93

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
            T YP+ +  +   +  G        D   DQ  T   ++ +   +E Y  S   + A+ 
Sbjct: 94  YTTYPKGEFTELSRFYSGYGLYLDSPDPRLDQSQTYKAIEQLQLYLEYYPQSERAEEAQN 153

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYV-----AAIPRFQLVLANYSDAEHAEEAMARLVE 235
            +   + +LA KE+   R Y   G Y+     + +   Q  L NY  +++ EE M  ++ 
Sbjct: 154 IMFELQEKLAYKELMATRLYFNLGTYMGNNFQSCVITAQNALKNYPYSKYREEFMFLIIR 213

Query: 236 AYVALAL 242
           A   LAL
Sbjct: 214 AKYELAL 220


>gi|163788588|ref|ZP_02183033.1| TPR repeat protein [Flavobacteriales bacterium ALC-1]
 gi|159875825|gb|EDP69884.1| TPR repeat protein [Flavobacteriales bacterium ALC-1]
          Length = 276

 Score = 95.2 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 92/251 (36%), Gaps = 17/251 (6%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           ++  +    LV            D     +   E+YE        + ++K++    Q   
Sbjct: 15  LYILLTCILLVSCSDFQKTLKSEDVSEKYKMATELYE-------AEKWNKSFRLLEQILP 67

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
            +     A K   + A   Y+  +Y +++   +++I+ YP+S+ +    +L    Y    
Sbjct: 68  KYRGKPQAEKLTFIHAMCLYNMKEYYRSSYHFDKFISVYPQSEKMKEAGFLAAKGYYYNS 127

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
                +Q+ T   ++ M   V  + ++ Y+  A   +     +L  K  EI + Y    +
Sbjct: 128 PVYSKEQKETVEAIEKMQLFVNAHPDTQYLDEANSIIKELDFKLEKKAFEIAKQYDLIRD 187

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEA----------YVALALMDEAREVVSLIQE 255
           Y A+I  F   L ++  A   +EAM    +A          Y+    + EA +     ++
Sbjct: 188 YKASIKSFNNFLFDFPGATLRKEAMFYRFDAAYNLAVNSVNYLKEERLKEAIDYYESFKK 247

Query: 256 RYPQGYWARYV 266
            Y    +    
Sbjct: 248 AYADSEFVGDA 258


>gi|327402044|ref|YP_004342882.1| outer membrane assembly lipoprotein YfiO [Fluviicola taffensis DSM
           16823]
 gi|327317552|gb|AEA42044.1| outer membrane assembly lipoprotein YfiO [Fluviicola taffensis DSM
           16823]
          Length = 262

 Score = 95.2 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 41/214 (19%), Positives = 78/214 (36%), Gaps = 10/214 (4%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           +++A     E  + +    + Q  +  P       S        Y+   +  A+     +
Sbjct: 32  FKEANKLYDEGKYERCVALYEQVYQRSPRTPQGEVSFYRLGKACYNVEDWYLASYYLSAF 91

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
             ++P S  V+   +L  +   +   +   DQ  T + L  +   V R+ NS  +    F
Sbjct: 92  QAKFPYSPKVEETMFLAALCAVENSPEASLDQHETDVALNELQSFVSRFPNSERLDTCNF 151

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
            +   R +L  K+    + Y K   Y AA+   Q  L NY  + + E+  A L+     L
Sbjct: 152 VMDKLRLKLEHKDFMNVKLYSKTENYRAAVVSSQQFLDNYPRSLNREDCWAILIRNSYHL 211

Query: 241 ALM----------DEAREVVSLIQERYPQGYWAR 264
           A+           D+  E  ++    +P   + R
Sbjct: 212 AINSIDAKLEERIDQTIERFNIFLVEFPNSNYLR 245


>gi|223934944|ref|ZP_03626863.1| TPR repeats containing protein [bacterium Ellin514]
 gi|223896397|gb|EEF62839.1| TPR repeats containing protein [bacterium Ellin514]
          Length = 335

 Score = 94.8 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 66/172 (38%), Gaps = 8/172 (4%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ-----YSAGK--YQQAASLGEEYITQY 124
           N  K  E +    ++ P++ +A ++ +     +     +  G   Y QAA   E    +Y
Sbjct: 154 NMDKTVEMYEMIIKNGPYSDIAPQAQMDIGAAREKQTRFLNGNEPYIQAAKAYERAADRY 213

Query: 125 PESKN-VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
            +         Y  G++Y +  R   YDQ      +   +  +  Y N P V  +   + 
Sbjct: 214 HDQPKFAADALYKAGLAYNKQARTAEYDQNTAGQAIATFTDFMTLYPNDPRVSESEKTIA 273

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
             + + A    +I R+Y     Y +A   +  VL    ++  A  ++ RL E
Sbjct: 274 ALKTEQARGNYQIARFYDNGHHYKSAQIYYNEVLIQDPNSPLAASSLKRLAE 325



 Score = 40.9 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/93 (13%), Positives = 28/93 (30%), Gaps = 8/93 (8%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
            L  A   +    Y  A       ++ +P S       YL    Y +  +D        +
Sbjct: 53  QLDVAQQAFDKKDYGLALKAARRVVSNWPLSDFAPKAEYLAARCYEEKTQD--------E 104

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
              +   +++E+Y  +   +          N+ 
Sbjct: 105 KAFKEYQKLLEKYPKADNYQEILQRQFAICNRF 137



 Score = 39.3 bits (91), Expect = 0.55,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 72/198 (36%), Gaps = 19/198 (9%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A     ++++  A +   +   ++P +  A K+  ++A       + ++A    ++ + +
Sbjct: 57  AQQAFDKKDYGLALKAARRVVSNWPLSDFAPKAEYLAARCYEEKTQDEKAFKEYQKLLEK 116

Query: 124 YPESKNVDYVY---------YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
           YP++ N   +          +L G  + ++   +P+        ++    I++    S  
Sbjct: 117 YPKADNYQEILQRQFAICNRFLGGQ-WFKLWGYIPFFP-NMDKTVEMYEMIIKNGPYSDI 174

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE-HAEEAMARL 233
              A+  +   R +         R+      Y+ A   ++     Y D    A +A+ + 
Sbjct: 175 APQAQMDIGAAREKQ-------TRFLNGNEPYIQAAKAYERAADRYHDQPKFAADALYKA 227

Query: 234 VEAYVALALMDEAREVVS 251
             AY   A   E  +  +
Sbjct: 228 GLAYNKQARTAEYDQNTA 245



 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 34/75 (45%)

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           A  ++++ +    + +Y  A+   + V++N+  ++ A +A       Y      ++A + 
Sbjct: 50  AKDQLDVAQQAFDKKDYGLALKAARRVVSNWPLSDFAPKAEYLAARCYEEKTQDEKAFKE 109

Query: 250 VSLIQERYPQGYWAR 264
              + E+YP+    +
Sbjct: 110 YQKLLEKYPKADNYQ 124


>gi|302346858|ref|YP_003815156.1| outer membrane assembly lipoprotein YfiO [Prevotella melaninogenica
           ATCC 25845]
 gi|302150288|gb|ADK96549.1| outer membrane assembly lipoprotein YfiO [Prevotella melaninogenica
           ATCC 25845]
          Length = 274

 Score = 94.8 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 46/265 (17%), Positives = 90/265 (33%), Gaps = 24/265 (9%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
             I +C ++     +     +   T+  Y+   YE A     +  +  A           
Sbjct: 5   ILIGICAVLLLTSCAHEYNQVYKTTNNDYK---YEFAKECFAKGKYGFAVPLLQDLVTIE 61

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
                A++ L M A  +Y    YQ A+   ++Y   YP  +  +   + +G S  +   +
Sbjct: 62  KGTDNAQECLYMLAMAEYCLKDYQAASETFKKYYQTYPRGQYAEMASFYIGQSLFEGTPE 121

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG--- 204
              DQ  T   +      ++ + N    + A+  +   +++L  KE    + Y   G   
Sbjct: 122 PRLDQTPTVAAIAAFQEYLDIFPNGKMKETAQQRLFALQDKLVRKEYLNAKLYYNLGSYF 181

Query: 205 --------EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM----------DEA 246
                    Y A I   Q  L +Y  ++  E     ++++   LA M           +A
Sbjct: 182 GNCTSGGNNYEACIITAQNALNDYPYSDLRENFAILVMKSKFELAQMSVEEKKVQRFQDA 241

Query: 247 REVVSLIQERYPQGYWARYVETLVK 271
            +        YP+    +  E  +K
Sbjct: 242 EDECYGFINEYPESKERKTAEDYIK 266


>gi|288940692|ref|YP_003442932.1| tol-pal system protein YbgF [Allochromatium vinosum DSM 180]
 gi|288896064|gb|ADC61900.1| tol-pal system protein YbgF [Allochromatium vinosum DSM 180]
          Length = 289

 Score = 94.0 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 48/136 (35%), Gaps = 8/136 (5%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
               T    +R++Y +    LKE+ + +A   FN   R +P    A  +        Y  
Sbjct: 154 PAPETHGASERDLYSQGFEHLKERQYQEAKTAFNDLLRRYPQGEYADNARYWLGETYYVL 213

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +Y  A +  +  +   P S  V      +G    +        Q A +     + R++ 
Sbjct: 214 REYPAALAEYDRLVELNPASAKVPGALLKIGFIQYE--------QNAIEQARATLERVIR 265

Query: 168 RYTNSPYVKGARFYVT 183
            Y NS   + AR  + 
Sbjct: 266 EYPNSTEARLARDRLE 281



 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 41/119 (34%), Gaps = 14/119 (11%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           R  +      + ++ RY    Y   AR+++              G  Y    EY AA+  
Sbjct: 177 RQYQEAKTAFNDLLRRYPQGEYADNARYWL--------------GETYYVLREYPAALAE 222

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           +  ++     +     A+ ++         +++AR  +  +   YP    AR     ++
Sbjct: 223 YDRLVELNPASAKVPGALLKIGFIQYEQNAIEQARATLERVIREYPNSTEARLARDRLE 281


>gi|319901963|ref|YP_004161691.1| outer membrane assembly lipoprotein YfiO [Bacteroides helcogenes P
           36-108]
 gi|319416994|gb|ADV44105.1| outer membrane assembly lipoprotein YfiO [Bacteroides helcogenes P
           36-108]
          Length = 267

 Score = 94.0 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/226 (19%), Positives = 82/226 (36%), Gaps = 15/226 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YE A  +  +  +++A    N+          A +SL M     Y+   YQ AA    +Y
Sbjct: 34  YEAAKTYFAKGQYNRAATLLNELIAILKGTDKAEESLYMLGMSYYNQKDYQTAAQTFIQY 93

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
              YP     +   +  G +      +   DQ  T   +Q +   +E +  S   + A+ 
Sbjct: 94  YNVYPRGTYTELARFHAGKALYLDTPEPRLDQSGTYSAIQQLQMFMEYFPKSAKKEEAQN 153

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYV-----AAIPRFQLVLANYSDAEHAEEAMARLVE 235
            +   +++L  KE    + Y   G Y+     + +   Q  L +Y      E+    ++ 
Sbjct: 154 MIFALQDKLVMKEYLSAKLYYNLGNYLGNNYQSCVITAQNALKDYPYTNLREDLSILILR 213

Query: 236 AYVALALMD----------EAREVVSLIQERYPQGYWARYVETLVK 271
           A   LA+            EA +     +  +P+  + +  E + K
Sbjct: 214 AKYELAVYSVEDKKPERYREAIDEYYAFKNEFPESKYIKEAERIFK 259


>gi|333030111|ref|ZP_08458172.1| outer membrane assembly lipoprotein YfiO [Bacteroides coprosuis DSM
           18011]
 gi|332740708|gb|EGJ71190.1| outer membrane assembly lipoprotein YfiO [Bacteroides coprosuis DSM
           18011]
          Length = 272

 Score = 93.3 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 52/262 (19%), Positives = 89/262 (33%), Gaps = 22/262 (8%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            I   +A   L    + S      D           YE A  +  +  ++KA    N+ +
Sbjct: 5   IIITLLAAIVLSSCGQYSKLLKSKDYEYK-------YEAAKTYYAKGQYNKASTLLNELT 57

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
             F     A +S+ +      +   Y  AA+    Y T YP  +  +   Y  G S    
Sbjct: 58  MIFKGTDKAEESVYLLGMCYMNQKDYTTAATTFITYYTSYPSGRYAEIARYQAGKSLYLD 117

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
             +   DQ +T   +Q +   +E Y NS     A   +   + +L  KE    + Y   G
Sbjct: 118 TPEPRLDQTSTYKAIQELHLYLEEYPNSARKTEAEDMMFELQEKLVKKEYLASKLYYDLG 177

Query: 205 -----EYVAAIPRFQLVLANYSDAEHAEE-------AMARLVEAYVALALMDEAREVVS- 251
                 Y + I   Q  L +Y   +  EE       A   + E  V     +  R+ +  
Sbjct: 178 LYMGNNYQSCIITAQNTLNDYPYTKQREELSVLILRAKYAIAENSVEEKKDERYRDAIDE 237

Query: 252 --LIQERYPQGYWARYVETLVK 271
               +  +P+  + +  E + K
Sbjct: 238 YYAFKNEFPESKYVKEAEKIFK 259


>gi|268317073|ref|YP_003290792.1| outer membrane assembly lipoprotein YfiO [Rhodothermus marinus DSM
           4252]
 gi|262334607|gb|ACY48404.1| outer membrane assembly lipoprotein YfiO [Rhodothermus marinus DSM
           4252]
          Length = 1000

 Score = 92.9 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 68/211 (32%), Gaps = 34/211 (16%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
           Y  +  +      +Y+    +    N+ +A   FN+   + P +    ++L    ++ + 
Sbjct: 573 YRQAAAEGESDYALYQIGQAYYNAGNYEEALRTFNRLLEEHPESTWREEALYQIGYIHFL 632

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
             +Y QA +     +   P         Y +G +     R         +  +    R++
Sbjct: 633 NQEYDQAIAAYRRLLELAPNDPLAAKAQYGIGDALFNAGR--------LEAAVNAYKRVL 684

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP--RFQLVLAN----Y 220
           ERY  SP+V  A   +                        +AA    R Q ++ +    Y
Sbjct: 685 ERYPQSPFVADAATSIHFAL--------------------IAAGNEARAQALIDSFATAY 724

Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVS 251
            D    +E   R  EA       +EA   + 
Sbjct: 725 PDTRIVDELRFRRAEALYRSGRSEEAIRALE 755



 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 47/230 (20%), Positives = 89/230 (38%), Gaps = 31/230 (13%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           ++KA L  ++QN++ A E F +  R  P    A  +L  +A   Y  G+  +A +L  +Y
Sbjct: 439 FQKAWLQYRQQNYAAASEAFLELYRQDPRGPKAGDALFWAAESFYQLGRLDRAEALFRDY 498

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP----YVK 176
           +  +P+  +V+  +Y +G  Y +        Q+  +  +Q   + +  Y  +     Y  
Sbjct: 499 LRSFPDGAHVEAAHYALGWVYFR--------QQRYEAAIQAFQQFLRAYRRTEEAVPYRL 550

Query: 177 GARFY--------------VTVGRNQLAAKE-----VEIGRYYLKRGEYVAAIPRFQLVL 217
            A                 +   R   A  E      +IG+ Y   G Y  A+  F  +L
Sbjct: 551 DALLRLADSYYALKRYPEAIRYYRQAAAEGESDYALYQIGQAYYNAGNYEEALRTFNRLL 610

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
             + ++   EEA+ ++   +      D+A      + E  P    A   +
Sbjct: 611 EEHPESTWREEALYQIGYIHFLNQEYDQAIAAYRRLLELAPNDPLAAKAQ 660



 Score = 72.1 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 40/277 (14%), Positives = 82/277 (29%), Gaps = 68/277 (24%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           ++Y       +    ++  A  F +     +A   F    R FP       +     +V 
Sbjct: 460 ELYRQDPRGPKAGDALFWAAESFYQLGRLDRAEALFRDYLRSFPDGAHVEAAHYALGWVY 519

Query: 105 YSAGKYQQAASLGEEYITQYPESKNV---------------------------------- 130
           +   +Y+ A    ++++  Y  ++                                    
Sbjct: 520 FRQQRYEAAIQAFQQFLRAYRRTEEAVPYRLDALLRLADSYYALKRYPEAIRYYRQAAAE 579

Query: 131 ---DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR- 186
              DY  Y +G +Y              +  L+  +R++E +  S + + A + +     
Sbjct: 580 GESDYALYQIGQAYYNA--------GNYEEALRTFNRLLEEHPESTWREEALYQIGYIHF 631

Query: 187 ---------------------NQLAAK-EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
                                + LAAK +  IG      G   AA+  ++ VL  Y  + 
Sbjct: 632 LNQEYDQAIAAYRRLLELAPNDPLAAKAQYGIGDALFNAGRLEAAVNAYKRVLERYPQSP 691

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
              +A   +  A +A      A+ ++      YP   
Sbjct: 692 FVADAATSIHFALIAAGNEARAQALIDSFATAYPDTR 728



 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 51/268 (19%), Positives = 90/268 (33%), Gaps = 61/268 (22%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             V   +  R ++  A    +    ++A  Y+ + +  +P   +A ++LL  A+ Q   G
Sbjct: 133 PGVPATQAARALFWMAESAQRLGRPAEAIGYYRRLADTYPNTRLAPQALLAMAYTQVEMG 192

Query: 109 KYQQAASLGEEYITQYPESKNV-------DYVYYLVGMSYAQMIRDVPY----------- 150
            Y +AA   E    +YP +            VYY +G  Y + I +V             
Sbjct: 193 AYDEAARTFEVLAARYPAAPEARGLGLALAQVYYELG-DYRRAIDEVQRRLPDLKGEAQQ 251

Query: 151 -----------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV--------------- 184
                        R ++  + Y  R++E   +SPY + A + +                 
Sbjct: 252 QAWLLLAESYNQLRDSENAIVYYRRVLED-PDSPYYRRALYGLAWNYYFEGVYQWAADHF 310

Query: 185 ------GRNQLAAKEVEIGRYYLK-----RGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
                  R+ LA K      YY         E   A+  F+ V+  + D+  A  A   L
Sbjct: 311 RQVREGRRDTLAMK----ATYYEAVCRKLAREPQQALELFRTVVLEWPDSPLAPHAQYEL 366

Query: 234 VEAYVALALMDEAREVVSLIQERYPQGY 261
                 +   +EA +    +   YP   
Sbjct: 367 ALLLYEMRRWEEAHDAFDFLVRTYPDSE 394



 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 78/256 (30%), Gaps = 57/256 (22%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D    +  Y +AV     +   +A E F     ++P + +A  +    A + Y   ++++
Sbjct: 319 DTLAMKATYYEAVCRKLAREPQQALELFRTVVLEWPDSPLAPHAQYELALLLYEMRRWEE 378

Query: 113 AASLGEEYITQYPESKNVDYVYYLVG-----MSYAQ------------------------ 143
           A    +  +  YP+S+ +     + G     + +                          
Sbjct: 379 AHDAFDFLVRTYPDSELLGDALRMRGYTAIALGHFDEAYESFDRAVALQAASPQLRTEIA 438

Query: 144 -MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV------------------TV 184
                + Y Q+      +    +  +    P    A F+                     
Sbjct: 439 FQKAWLQYRQQNYAAASEAFLELYRQDPRGPKAGDALFWAAESFYQLGRLDRAEALFRDY 498

Query: 185 GRNQLAAKEVEIGRY-----YLKRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVE 235
            R+      VE   Y     Y ++  Y AAI  FQ  L  Y        +  +A+ RL +
Sbjct: 499 LRSFPDGAHVEAAHYALGWVYFRQQRYEAAIQAFQQFLRAYRRTEEAVPYRLDALLRLAD 558

Query: 236 AYVALALMDEAREVVS 251
           +Y AL    EA     
Sbjct: 559 SYYALKRYPEAIRYYR 574



 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 71/239 (29%), Gaps = 33/239 (13%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
             D R    ++ +A   L      +A       +  +P   +  ++ L      +  G+Y
Sbjct: 61  PDDPRVPEALFYEAEARLALGQTDEAAALLRVFAARYPTHPLVYEAQLALGKYFFDTGRY 120

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A     + +   P              +   M        R     + Y  R+ + Y 
Sbjct: 121 DDARQAFGQALR--PGVPAT-----QAARALFWMAESAQRLGRPA-EAIGYYRRLADTYP 172

Query: 171 NSPYVKGARFYVTVGRNQLAAK-------EVEIGRY----------------YLKRGEYV 207
           N+     A   +   + ++ A        EV   RY                Y + G+Y 
Sbjct: 173 NTRLAPQALLAMAYTQVEMGAYDEAARTFEVLAARYPAAPEARGLGLALAQVYYELGDYR 232

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
            AI   Q  L +    E  ++A   L E+Y  L   + A      + E  P   + R  
Sbjct: 233 RAIDEVQRRLPDLKG-EAQQQAWLLLAESYNQLRDSENAIVYYRRVLED-PDSPYYRRA 289



 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 70/213 (32%), Gaps = 22/213 (10%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
           V L +          +  A+    +  ++ + + F Q    +P      ++L   A  + 
Sbjct: 19  VALQAQPAPPGPAVSFAHALALHSDGFYTLSAQTFAQFRSTYPDDPRVPEALFYEAEARL 78

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
           + G+  +AA+L   +  +YP    V      +G           +D        Q   + 
Sbjct: 79  ALGQTDEAAALLRVFAARYPTHPLVYEAQLALG--------KYFFDTGRYDDARQAFGQA 130

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           +     +     A F++     +L              G    AI  ++ +   Y +   
Sbjct: 131 LRPGVPATQAARALFWMAESAQRL--------------GRPAEAIGYYRRLADTYPNTRL 176

Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           A +A+  +    V +   DEA     ++  RYP
Sbjct: 177 APQALLAMAYTQVEMGAYDEAARTFEVLAARYP 209



 Score = 39.7 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 35/251 (13%), Positives = 75/251 (29%), Gaps = 66/251 (26%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR--------------- 94
           +  D    +  Y              A   + +    +P +                   
Sbjct: 650 APNDPLAAKAQYGIGDALFNAGRLEAAVNAYKRVLERYPQSPFVADAATSIHFALIAAGN 709

Query: 95  ----KSLLMS------------------AFVQYSAGKYQQAASLGEEYITQYPESKNVD- 131
               ++L+ S                  A   Y +G+ ++A    E ++     S   D 
Sbjct: 710 EARAQALIDSFATAYPDTRIVDELRFRRAEALYRSGRSEEAIRALEAFVR---GSHAPDL 766

Query: 132 --YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
                Y +   YA+        Q       + + +++  +     +  A           
Sbjct: 767 MGEALYYLATLYAE--------QELYDEAERTLQQLLAAHAEHRRMPEAL---------- 808

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD-AEHAEEAMARLVEAYVALALMDEARE 248
               + +G   LK+  Y AA+  F+ + +   + +E    A+     A + L    EAR+
Sbjct: 809 ----LLLGNVQLKQERYEAALVSFRRLASMAPERSELLARALYGQSVALLELGRFAEARQ 864

Query: 249 VVSLIQERYPQ 259
            ++  Q R+P+
Sbjct: 865 ALTEAQARFPE 875



 Score = 39.7 bits (92), Expect = 0.47,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 71/203 (34%), Gaps = 24/203 (11%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
             +Y  A L+ +++ + +A     Q            ++LL+   VQ    +Y+ A    
Sbjct: 769 EALYYLATLYAEQELYDEAERTLQQLLAAHAEHRRMPEALLLLGNVQLKQERYEAALVSF 828

Query: 118 EEYITQYP-ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
               +  P  S+ +    Y   ++  ++ R             Q ++    R+      +
Sbjct: 829 RRLASMAPERSELLARALYGQSVALLELGRFA--------EARQALTEAQARFP--EDGQ 878

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
            A   + +G+ +LA  E   GR       Y A + R Q         E   EA+ RL E 
Sbjct: 879 PAI--LLLGQARLAEAE---GRPDEAERLYRAVVGRAQD--------EAGAEALYRLGEL 925

Query: 237 YVALALMDEAREVVSLIQERYPQ 259
            +       A E +S +   +P 
Sbjct: 926 LLRRGDPHRAIEELSRLPTLFPG 948


>gi|288926533|ref|ZP_06420451.1| lipoprotein [Prevotella buccae D17]
 gi|315609033|ref|ZP_07884003.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
 gi|288336675|gb|EFC75043.1| lipoprotein [Prevotella buccae D17]
 gi|315249237|gb|EFU29256.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
          Length = 282

 Score = 92.9 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 84/245 (34%), Gaps = 20/245 (8%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K +L   F      L G   + ++    D+          YE A        +++A  
Sbjct: 1   MKKISLAALFV--AILLSGCAHEFNQVYKSDNYPYK------YEYAKECFAAGKYTRAAT 52

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
              +          A++ L M A  +Y    YQ A+   ++Y + YP  +  +   Y VG
Sbjct: 53  LLGELVTVMKGTENAQECLYMYAMAEYCMRDYQTASEYFKKYYSSYPRGQYAEMAKYYVG 112

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
            S      +   DQ  T   +      ++ + +    + A+  +   +++L  KE+   +
Sbjct: 113 ESLYMSTPEPRLDQSQTYSAISAYQEYLDLFPDGKLKQQAQQRLFALQDKLVQKELYNAQ 172

Query: 199 YYLKRG-----------EYVAAIPRFQLVLANYSDAEHAEE-AMARLVEAYVALALMDEA 246
            Y   G            Y A I   Q  L  Y  +   E  A   +   Y    +  EA
Sbjct: 173 LYYDLGTYFGNCTSGGNNYQACIVTSQNALKEYPYSSKRERFATLLMKSKYELAKMSVEA 232

Query: 247 REVVS 251
           +++  
Sbjct: 233 KQMER 237


>gi|325297928|ref|YP_004257845.1| outer membrane assembly lipoprotein YfiO [Bacteroides salanitronis
           DSM 18170]
 gi|324317481|gb|ADY35372.1| outer membrane assembly lipoprotein YfiO [Bacteroides salanitronis
           DSM 18170]
          Length = 277

 Score = 92.9 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 52/271 (19%), Positives = 95/271 (35%), Gaps = 32/271 (11%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            I   ++V  L      ++    +   TD  Y+   YE A  +  +   S+A     +  
Sbjct: 5   IILSMLSVTMLSSCGEYNT----VLKSTDYEYK---YEAAKGYFAKGQNSRAATLLEELI 57

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
                   A +S  M A   ++ G Y  A+     Y T YP     +   +  G S    
Sbjct: 58  PILKGTSNAEESAYMLAMTYFNQGDYISASHYFNVYYTTYPRGTYTELARFFCGKSLYLD 117

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
             +   DQ +T   +  +   +E +  S     A+  +   +++L  KE    + Y   G
Sbjct: 118 TPEPRLDQTSTYKAIDELQMFIEYFPTSSRKDLAQNMIYELQDKLVEKEYLSAKLYYDLG 177

Query: 205 -------------EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---------- 241
                         Y+AA+   Q VL +Y   +  E+    ++ A   +A          
Sbjct: 178 SYTGNTSYSSTGNNYLAAVVTAQNVLRDYPYTKRREDLSILILRAKYDMAKESVLEKKEE 237

Query: 242 -LMDEAREVVSLIQERYPQGYWARYVETLVK 271
            + D   E  +  +  YP+  + + VE + K
Sbjct: 238 RMRDAIDEYYA-FKNEYPESKYIKEVEAIYK 267


>gi|154492873|ref|ZP_02032499.1| hypothetical protein PARMER_02512 [Parabacteroides merdae ATCC
           43184]
 gi|154087178|gb|EDN86223.1| hypothetical protein PARMER_02512 [Parabacteroides merdae ATCC
           43184]
          Length = 269

 Score = 92.5 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 46/187 (24%), Positives = 74/187 (39%), Gaps = 5/187 (2%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A  +   + +SK+    ++    F     A +SL + A   Y    YQ A+     Y
Sbjct: 34  YSYAKKYFNAKQYSKSATLLDELVPIFKGTANAEESLYLLAQSYYGQKDYQTASQYFNTY 93

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
            T YP+ +  +   Y  G        D   DQ  T   +  +   +E Y  S   K A+ 
Sbjct: 94  YTTYPKGEFTELARYYSGYGLYLDSPDPRLDQAQTYEAINQLQLYLEYYPQSERAKEAQN 153

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRG-----EYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
            +   + +LA KE+   R Y   G      Y++ +   Q  L NY  +++ EE M   + 
Sbjct: 154 IMFELQEKLAYKELLAVRLYFNLGTYMGNNYLSCVITAQNALKNYPYSKYREEFMFYTIR 213

Query: 236 AYVALAL 242
           A   LA+
Sbjct: 214 AKYELAV 220


>gi|311748467|ref|ZP_07722252.1| putative TPR repeat protein [Algoriphagus sp. PR1]
 gi|311302789|gb|EAZ81230.2| putative TPR repeat protein [Algoriphagus sp. PR1]
          Length = 296

 Score = 92.1 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 87/261 (33%), Gaps = 26/261 (9%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           I   I    L      +  +   +         E+Y  A  + +E  ++KA   +++   
Sbjct: 6   IIVLIVGIALTACGPFNKLEKSTNW-------EELYAGANKYYQEGEYNKAIILYDKVLP 58

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
               +  A  +    A   +   +Y +AA     +   Y  S   +   ++   +     
Sbjct: 59  VIRGSEKAELADYNYANCHFKTKRYIEAAGYFNNFYRTYNRSPLAEEALFMRAYALYLDA 118

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL--KR 203
            D   DQ++++  +  + + V  +  S   + A   +T    +   K  +    Y   K 
Sbjct: 119 PDFNLDQQSSQEAVGAIQQFVTLFPGSASYERAMEMLTDLEKRFEEKAYQQAEMYYTLKD 178

Query: 204 GEYVAAIPRF-----QLVLANYSDAEHAEEAMARLVE-----------AYVALALMDEAR 247
           G Y     R      Q    +Y ++++ EE   +LVE           A     L D A 
Sbjct: 179 GLYPGQNMRACAISIQNFAKDYPESKYNEELAYKLVEVTTKYAENSVYAKKEERLTD-AL 237

Query: 248 EVVSLIQERYPQGYWARYVET 268
               +   +YP+  +   VE 
Sbjct: 238 RFAGVFYRKYPESAYTSEVEK 258



 Score = 36.2 bits (83), Expect = 5.4,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 42/126 (33%), Gaps = 7/126 (5%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLM--SAFVQYSAGKYQQAASLGEEYITQYPES-- 127
           ++ +A E      + F      +++ +        Y     +  A   + +   YPES  
Sbjct: 147 SYERAMEMLTDLEKRFEEKAY-QQAEMYYTLKDGLYPGQNMRACAISIQNFAKDYPESKY 205

Query: 128 -KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
            + + Y    V   YA+       ++R T   L++      +Y  S Y      Y    R
Sbjct: 206 NEELAYKLVEVTTKYAENSVYAKKEERLT-DALRFAGVFYRKYPESAYTSEVEKYEAEAR 264

Query: 187 NQLAAK 192
            ++   
Sbjct: 265 EEMQEH 270


>gi|189462715|ref|ZP_03011500.1| hypothetical protein BACCOP_03412 [Bacteroides coprocola DSM 17136]
 gi|189430584|gb|EDU99568.1| hypothetical protein BACCOP_03412 [Bacteroides coprocola DSM 17136]
          Length = 278

 Score = 91.7 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 51/277 (18%), Positives = 91/277 (32%), Gaps = 34/277 (12%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K+ +    S  V    G           + V         YE A  +  +   SKA  
Sbjct: 1   MKKYIVMAILSAGVLSSCG---------EYNKVLKSTDNEYKYEAAKSYFAKGQNSKAAT 51

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                +        A +S  M A   Y+ G Y  A+     Y T YP     +   +  G
Sbjct: 52  LLEDLALIMKGTSNAEESAYMLAMTYYNQGDYITASHYFNTYYTTYPRGTYTELARFYSG 111

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
            +      +   DQ +T   ++ +   +E +  S   + A+  +   +++L  KE     
Sbjct: 112 KALYLDTPEPRLDQSSTYKAIEELQMFIEYFPESDRKELAQNMIFELQDKLVEKEFLSAL 171

Query: 199 YYLKRG-------------EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---- 241
            Y   G              Y AA+   Q +L  Y   +  E+    ++ A   +A    
Sbjct: 172 LYYDLGSYTGNTVYSSTGNNYQAAVVTAQNILREYPYTKRREDLSILILRAKYDMAKESV 231

Query: 242 -------LMDEAREVVSLIQERYPQGYWARYVETLVK 271
                  + +   E  + I E +P+  +   VE + K
Sbjct: 232 PEKKEDRMRETIDEYYAFINE-FPESKYKSEVERIFK 267


>gi|330901399|gb|EGH32818.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
           japonica str. M301072PT]
          Length = 167

 Score = 91.7 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 22/68 (32%), Positives = 36/68 (52%)

Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
            E+ +  YYL R  YVAA  R + V+ N+ +     + +A +VE+Y  L L D A   + 
Sbjct: 2   YEIHVADYYLTRQAYVAAANRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLE 61

Query: 252 LIQERYPQ 259
           +++  YP 
Sbjct: 62  VLKTNYPN 69


>gi|298373604|ref|ZP_06983593.1| lipoprotein [Bacteroidetes oral taxon 274 str. F0058]
 gi|298274656|gb|EFI16208.1| lipoprotein [Bacteroidetes oral taxon 274 str. F0058]
          Length = 270

 Score = 91.7 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 68/189 (35%), Gaps = 6/189 (3%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA-GVARKSLLMSAFVQYSAGKYQQAAS 115
             E +  A  +   + + KA    N       F+     +++ + A        Y  A+ 
Sbjct: 22  NEERFTAAKSYFLSKKYQKASTLLNDLVVANAFSGKKMEEAMYLLAESYLGDKDYYSASD 81

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
              EYI  +P         +     Y     D   DQ +T   +   +  ++ Y +   V
Sbjct: 82  SYAEYIKSFPRGDYAKDAKFKTAYCYYLDSPDARLDQTSTVHAINAFTEYIQIYPDGEKV 141

Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRG-----EYVAAIPRFQLVLANYSDAEHAEEAM 230
           + A  Y+   +N+LA K     + Y   G      Y +AI   Q  L  Y + ++ E+  
Sbjct: 142 QEAYNYIEELQNKLAYKSYLEAKLYYNLGLYLGNNYRSAIISAQNTLKQYPETKYREDLS 201

Query: 231 ARLVEAYVA 239
             +++A  A
Sbjct: 202 FLILKAKYA 210



 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 75/223 (33%), Gaps = 43/223 (19%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
           V  ++ +  + +  +Y  A  +L ++++  A + + +  + FP    A+ +   +A+  Y
Sbjct: 49  VVANAFSGKKMEEAMYLLAESYLGDKDYYSASDSYAEYIKSFPRGDYAKDAKFKTAYCYY 108

Query: 106 SAG--------KYQQAASLGEEYITQYPESKNVDYVY--------------YLVGMSYAQ 143
                          A +   EYI  YP+ + V   Y              YL    Y  
Sbjct: 109 LDSPDARLDQTSTVHAINAFTEYIQIYPDGEKVQEAYNYIEELQNKLAYKSYLEAKLYYN 168

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
           +   +       +  +      +++Y  + Y +   F +   +   A     +   Y   
Sbjct: 169 LGLYLG---NNYRSAIISAQNTLKQYPETKYREDLSFLILKAKYAEAKH--SVSELY--- 220

Query: 204 GEYVAAIPRFQLVLANY-------SDAEHAEEAMARLVEAYVA 239
                   RF  V+  Y        ++++ +EA    VEA   
Sbjct: 221 ------SERFSEVIDEYYKYSSEFQNSKNIKEAEHIFVEAKKQ 257


>gi|224024034|ref|ZP_03642400.1| hypothetical protein BACCOPRO_00751 [Bacteroides coprophilus DSM
           18228]
 gi|224017256|gb|EEF75268.1| hypothetical protein BACCOPRO_00751 [Bacteroides coprophilus DSM
           18228]
          Length = 284

 Score = 91.3 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 50/266 (18%), Positives = 96/266 (36%), Gaps = 27/266 (10%)

Query: 30  IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
           IA+  L      S  + Y   +    Y+ + YE A  +  +   +KA     +       
Sbjct: 5   IAMALLSAGVLTSCGE-YNKVLKSTDYEYK-YEAAKEYFAKGQNTKAATLLEELVNILKG 62

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
                ++L M A   ++ G Y  A+     Y T YP     +   +  G +      +  
Sbjct: 63  MMNGEEALYMQAMTYFNQGDYVTASHYFNTYYTTYPRGTYTELARFNCGRALYLDTPEPR 122

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG----- 204
            DQ +T   ++ +   +E +  S     A+  +   +++L  KE    + Y   G     
Sbjct: 123 LDQSSTYKAIEELQMFIEYFPMSSRKDQAQSMIFELQDKLVEKEYMSAKLYYDLGSYTGN 182

Query: 205 --------EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA-----------LMDE 245
                    Y+AA+   Q +L  Y   +  E+    ++ A   +A           + D 
Sbjct: 183 AVYSSTGNNYLAAVITAQNILKEYPYTKMREDLSILILRAKYGMARESVLEKKEDRMRDT 242

Query: 246 AREVVSLIQERYPQGYWARYVETLVK 271
             E  + I E +P+  + + VE++ K
Sbjct: 243 IDEYYAFINE-FPESKYRKEVESIFK 267


>gi|218261682|ref|ZP_03476417.1| hypothetical protein PRABACTJOHN_02085 [Parabacteroides johnsonii
           DSM 18315]
 gi|218223862|gb|EEC96512.1| hypothetical protein PRABACTJOHN_02085 [Parabacteroides johnsonii
           DSM 18315]
          Length = 269

 Score = 90.9 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 45/187 (24%), Positives = 74/187 (39%), Gaps = 5/187 (2%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A  +   + +SK+    ++       +  A +SL + A   Y    YQ A+     Y
Sbjct: 34  YSYAKKYFNAKQYSKSATLLDELVPVLKGSAQAEESLYLLAQSYYGQKDYQTASQYFNTY 93

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
            T YP+ +  +   Y  G        D   DQ  T   +  +   +E Y  S   K A+ 
Sbjct: 94  YTTYPKGEYTELARYYSGYGLYLDSPDPRLDQAQTYEAINQLQLYLEYYPQSERAKEAQN 153

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRG-----EYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
            +   + +LA KE+   R Y   G      Y++ +   Q  L NY  +++ EE M   + 
Sbjct: 154 IMFELQEKLAYKELLAVRLYFNLGTYMGNNYLSCVITAQNALKNYPYSKYREEFMFYTIR 213

Query: 236 AYVALAL 242
           A   LA+
Sbjct: 214 AKYELAV 220


>gi|213861767|ref|ZP_03386237.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Typhi str. M223]
          Length = 77

 Score = 90.9 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 10/77 (12%)

Query: 125 PESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPY 174
           P   N+DYV Y+ G++   +                D +  +      S++V  Y NS Y
Sbjct: 1   PTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQY 60

Query: 175 VKGARFYVTVGRNQLAA 191
              A   +   +++LA 
Sbjct: 61  TTDATKRLVFLKDRLAK 77


>gi|198274587|ref|ZP_03207119.1| hypothetical protein BACPLE_00739 [Bacteroides plebeius DSM 17135]
 gi|198272034|gb|EDY96303.1| hypothetical protein BACPLE_00739 [Bacteroides plebeius DSM 17135]
          Length = 278

 Score = 90.6 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 48/275 (17%), Positives = 91/275 (33%), Gaps = 34/275 (12%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K+   +  S  V    G   +  +    +           YE A  +  +   S+A  
Sbjct: 1   MKKYIAMVLLSAGVLSSCGEYNKVLKSTDYEYK---------YEAAKSYFAKGQNSRAAT 51

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
              +            +SL M     Y+ G +  A+     Y T YP     +   +  G
Sbjct: 52  ILEELIPILKGTANGEESLYMLGMTYYNQGDFVTASHYFNTYYTTYPRGTYTELARFHSG 111

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
            +      +   DQ +T   +Q +   +E +  S     A+  +   +++L  KE    +
Sbjct: 112 KALYLDTPEPRLDQSSTYKAIQELQMFMEYFPTSQRKDIAQNMIFELQDKLVEKEYLSSK 171

Query: 199 YYLKRG-------------EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---- 241
            Y   G              Y+AAI   Q VL  Y   +  EE    ++ A   +A    
Sbjct: 172 LYYDLGSYSGNASYSSTGNNYLAAIVTAQNVLKEYPYTKLREELSILILRAKYHMAKESV 231

Query: 242 -------LMDEAREVVSLIQERYPQGYWARYVETL 269
                  + +   E  +  +  +P+  + + VE +
Sbjct: 232 LDKREDRMRETVDEYYA-FKNEFPESKYMKEVEGI 265


>gi|254884530|ref|ZP_05257240.1| lipoprotein [Bacteroides sp. 4_3_47FAA]
 gi|294778637|ref|ZP_06744059.1| outer membrane assembly lipoprotein YfiO [Bacteroides vulgatus
           PC510]
 gi|254837323|gb|EET17632.1| lipoprotein [Bacteroides sp. 4_3_47FAA]
 gi|294447586|gb|EFG16164.1| outer membrane assembly lipoprotein YfiO [Bacteroides vulgatus
           PC510]
          Length = 285

 Score = 90.2 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 47/282 (16%), Positives = 96/282 (34%), Gaps = 32/282 (11%)

Query: 13  EAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN 72
             +  ++ K+ +     ++   L           Y   +    Y+ + YE A  +  +  
Sbjct: 2   RNYLNKMKKYIIIAL--VSGTVLTSCG------EYNKVLKSTDYEYK-YEAAKSYFGKGQ 52

Query: 73  FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
            +KA     +          A +SL M     Y+ G +  A+     Y   YP     + 
Sbjct: 53  NTKAATILEELITIMKGTDKAEESLYMLGMTYYNQGDFITASHYFTTYYNTYPRGVYTEQ 112

Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
             Y  G +      +   DQ +T   +Q +   +E +  S   + A+  +   +++L  K
Sbjct: 113 ARYFSGKALFLDTPEPRLDQSSTYKAIQELQMFMEYFPTSSRRQDAQQMIFDLQDKLVMK 172

Query: 193 EVEIGRYYLKRG-------------EYVAAIPRFQLVLANYSDAEHAEE-------AMAR 232
           +    + Y   G              Y++ I   Q  L +Y   +  E+       A   
Sbjct: 173 DYLAAKLYYDLGSYTGNSTYSTTGNNYLSCIVTAQNALKDYPYTKMREDLSILVLRAKYD 232

Query: 233 LVEAYVALALMDEAREVVSL---IQERYPQGYWARYVETLVK 271
           + +A V     +  RE +      +  +P   + + VE++ K
Sbjct: 233 MAKASVEEKKEERMRETIDEYYSFKNEFPDSKYTKEVESIYK 274


>gi|226227369|ref|YP_002761475.1| hypothetical protein GAU_1963 [Gemmatimonas aurantiaca T-27]
 gi|226090560|dbj|BAH39005.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 287

 Score = 89.4 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 87/241 (36%), Gaps = 16/241 (6%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L +  S+A   + G  R            D      +++ ++   + + +  A   F + 
Sbjct: 5   LMLLLSVAAA-VAGCSRGF-------RPQDFATPEALFKASLQEFERKKWDNAQLGFERL 56

Query: 84  S----RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
           +       P   +A  +    A       ++  AA   E     +P+           G 
Sbjct: 57  TNDLSSRDPL--LAP-AYFYLALTHERKHEFLLAAQAFERVTDGFPDDTLAPTAMLGSGR 113

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           SY  + R    D    +  +  +  ++  Y ++  V+ A+  ++      A K+   G +
Sbjct: 114 SYQSIWRRPSLDPEQGQKAVSVLRALLSSYPDAKEVEDAKARISTLEEWFAEKDYMTGVH 173

Query: 200 YLK-RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           Y++ R     AI  F+ V+  Y   + A  +  RL E Y  +   ++A E  + + + YP
Sbjct: 174 YVRVRRAIDPAIIYFKDVVTTYPTTKAARLSWLRLNELYTKIRWKEDAAETCTAMWKAYP 233

Query: 259 Q 259
            
Sbjct: 234 G 234


>gi|145220537|ref|YP_001131246.1| putative lipoprotein [Prosthecochloris vibrioformis DSM 265]
 gi|145206701|gb|ABP37744.1| putative lipoprotein [Chlorobium phaeovibrioides DSM 265]
          Length = 298

 Score = 89.0 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 48/285 (16%), Positives = 97/285 (34%), Gaps = 54/285 (18%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           L++ AL +    ++    G   Q         V      +E Y +A  F +++ + KA  
Sbjct: 7   LFRSALVVIVFASMALW-GCSSQK------PVVKAETQVKEGYSRASEFYQKEEYEKAAA 59

Query: 79  YFNQCSRDFPFAGVAR----KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
                     F+  A       L + A   + + +Y  ++ + +  + Q P S   +   
Sbjct: 60  ELEPLL----FSSRATALEDDVLFLLADSYFQSEQYLLSSDMYDRLLQQVPRSPFREQAG 115

Query: 135 YLVGMSYAQMIRDVPYDQRATKLM----------------------LQYMSRIVERYTNS 172
           +++  SY ++      DQ  T+                        L     +++   ++
Sbjct: 116 FMLAQSYEKLSPVYELDQEYTRKAIESYSLWLGEYGTRDSAAVSRDLDTYRELLKINPDN 175

Query: 173 PYVKG-----------------ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
              +                  A   + V  ++LAA    + R Y+   +Y AA   F  
Sbjct: 176 ASYRERFEGFSREMKRQGSITHATKAIPVLYDKLAASAYSVARQYVVLKKYKAAGISFDE 235

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           V++ YS      +A+   +E  V      EAR  +    ++YP+ 
Sbjct: 236 VVSRYSQTPWYRKALVGRIEVLVKRGKWFEARTAMDQFLQKYPES 280


>gi|150005556|ref|YP_001300300.1| hypothetical protein BVU_3041 [Bacteroides vulgatus ATCC 8482]
 gi|212693420|ref|ZP_03301548.1| hypothetical protein BACDOR_02936 [Bacteroides dorei DSM 17855]
 gi|237710477|ref|ZP_04540958.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|237726984|ref|ZP_04557465.1| lipoprotein [Bacteroides sp. D4]
 gi|319640778|ref|ZP_07995491.1| hypothetical protein HMPREF9011_01088 [Bacteroides sp. 3_1_40A]
 gi|149933980|gb|ABR40678.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
 gi|212664064|gb|EEB24638.1| hypothetical protein BACDOR_02936 [Bacteroides dorei DSM 17855]
 gi|229433840|gb|EEO43917.1| lipoprotein [Bacteroides dorei 5_1_36/D4]
 gi|229455199|gb|EEO60920.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|317387590|gb|EFV68456.1| hypothetical protein HMPREF9011_01088 [Bacteroides sp. 3_1_40A]
          Length = 278

 Score = 89.0 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 47/270 (17%), Positives = 91/270 (33%), Gaps = 30/270 (11%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            I   ++   L           Y   +    Y+ + YE A  +  +   +KA     +  
Sbjct: 5   IIIALVSGTVLTSCG------EYNKVLKSTDYEYK-YEAAKSYFGKGQNTKAATILEELI 57

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
                   A +SL M     Y+ G +  A+     Y   YP     +   Y  G +    
Sbjct: 58  TIMKGTDKAEESLYMLGMTYYNQGDFITASHYFTTYYNTYPRGVYTEQARYFSGKALFLD 117

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
             +   DQ +T   +Q +   +E +  S   + A+  +   +++L  K+    + Y   G
Sbjct: 118 TPEPRLDQSSTYKAIQELQMFMEYFPTSSRRQDAQQMIFDLQDKLVMKDYLAAKLYYDLG 177

Query: 205 -------------EYVAAIPRFQLVLANYSDAEHAEE-------AMARLVEAYVALALMD 244
                         Y++ I   Q  L +Y   +  E+       A   + +A V     +
Sbjct: 178 SYTGNSTYSTTGNNYLSCIVTAQNALKDYPYTKMREDLSILVLRAKYDMAKASVEEKKEE 237

Query: 245 EAREVVSL---IQERYPQGYWARYVETLVK 271
             RE +      +  +P   + + VE++ K
Sbjct: 238 RMRETIDEYYSFKNEFPDSKYTKEVESIYK 267


>gi|121999147|ref|YP_001003934.1| DNA uptake lipoprotein-like protein [Halorhodospira halophila SL1]
 gi|121590552|gb|ABM63132.1| DNA uptake lipoprotein-like protein [Halorhodospira halophila SL1]
          Length = 256

 Score = 89.0 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 81/234 (34%), Gaps = 38/234 (16%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S  +    R +Y +A+  ++  +   A    ++    +P    AR++LL +A+V+Y  G+
Sbjct: 32  SAQEREQARSLYAEALEAVERGDLEAAQGMLDELQEAYPETRHARQALLEAAYVEYRLGQ 91

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD---------------------- 147
           Y QA    E +       +              +   D                      
Sbjct: 92  YPQAIERAEIF------HRQAAQ--------TEEQADDEDLRYALYLRAAAAHALWDATE 137

Query: 148 --VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
                D    +    Y   IV  Y  S   + A   +   R+ +A +E+   R  L  G 
Sbjct: 138 GEAERDAAGARRAFGYYRDIVRDYPESERAEEAARRMNEIRSDVAEEELRRARRRLDDGA 197

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           Y  A  R   +   Y   + A +A+A  V+A   L    EA     +++ ++P 
Sbjct: 198 YAEAAERGAWIAEQYPGQQAAADALALQVDALERLGREREAEATRRMLEIKHPD 251


>gi|303237038|ref|ZP_07323608.1| outer membrane assembly lipoprotein YfiO [Prevotella disiens
           FB035-09AN]
 gi|302482425|gb|EFL45450.1| outer membrane assembly lipoprotein YfiO [Prevotella disiens
           FB035-09AN]
          Length = 288

 Score = 88.6 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 45/275 (16%), Positives = 83/275 (30%), Gaps = 30/275 (10%)

Query: 9   ICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL 68
           +C F   +  + K  L  F  +A         + ++       T        YE A    
Sbjct: 1   MCNFAIQSEFMKKNILITF--VATLLFTSCAHEYNQVFKSTDYTYK------YEYAKECF 52

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
               +S A                A + L M A  ++    Y+ A+   ++Y   YP   
Sbjct: 53  ANGKYSFAIPLLQDVVTIQKGTDNAEECLYMLAMSEFGMRDYEAASETFKKYFQTYPHGI 112

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
             +   + +G S  +   +   DQ  T   +      ++ Y N      A+  +   +++
Sbjct: 113 YAEMASFYIGQSLYEGTPEARLDQTPTVAAIAAFQDYLDLYPNGKMKSTAQQRLFALQDK 172

Query: 189 LAAKEVEIGRYYLKRGE------------YVAAIPRFQLVLANYSDAEHAEE-------- 228
           L  KE    + Y   G             Y A I   Q  L ++  +   E+        
Sbjct: 173 LIRKEYLNAKLYYNLGSYFGNCGNDGGNNYEACIITAQSALNDFPYSSLREDFAILVMKG 232

Query: 229 --AMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
              +A++      L    +A +        YP   
Sbjct: 233 KFELAQMSVEEKKLQRYQDAEDECYGFINEYPDSK 267


>gi|265756511|ref|ZP_06090717.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|263233699|gb|EEZ19314.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 278

 Score = 88.6 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 48/270 (17%), Positives = 92/270 (34%), Gaps = 30/270 (11%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            I   ++   L           Y   +    Y+ + YE A  +  +   +KA     +  
Sbjct: 5   IIIALVSGTVLTSCG------EYNKVLKSTDYEYK-YEAAKSYFGKGQNTKAATILEELI 57

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
                   A +SL M     Y+ G +  A+     Y   YP     + V Y  G +    
Sbjct: 58  TIMKGTDKAEESLYMLGMTYYNQGDFITASHYFTTYYNTYPRGVYTEQVRYFSGKALFLD 117

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
             +   DQ +T   +Q +   +E +  S   + A+  +   +++L  K+    + Y   G
Sbjct: 118 TPEPRLDQSSTYKAIQELQMFMEYFPTSSRRQDAQQMIFDLQDKLVMKDYLAAKLYYDLG 177

Query: 205 -------------EYVAAIPRFQLVLANYSDAEHAEE-------AMARLVEAYVALALMD 244
                         Y++ I   Q  L +Y   +  E+       A   + +A V     +
Sbjct: 178 SYTGNSTYSTTGNNYLSCIVTAQNALKDYPYTKMREDLSILVLRAKYDMAKASVEEKKEE 237

Query: 245 EAREVVSL---IQERYPQGYWARYVETLVK 271
             RE +      +  +P   + + VE++ K
Sbjct: 238 RMRETIDEYYSFKNEFPDSKYTKEVESIYK 267


>gi|284036226|ref|YP_003386156.1| outer membrane assembly lipoprotein YfiO [Spirosoma linguale DSM
           74]
 gi|283815519|gb|ADB37357.1| outer membrane assembly lipoprotein YfiO [Spirosoma linguale DSM
           74]
          Length = 299

 Score = 88.6 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 94/259 (36%), Gaps = 21/259 (8%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           I   I V FL+G     S+      +         Y+ A+ + K+ ++ +A   F +   
Sbjct: 9   ILLGIGVVFLLGSCSPFSK------LQKSGSDDAKYKGALEYYKKGDWYRAGLLFEELIP 62

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
               +  +  +    A+ QY   +Y  +A+L +++   +  S+      Y+   S  +  
Sbjct: 63  VLKGSNESEMAQFYYAYTQYQQQQYLLSATLFKKFYETFARSEYAQEAMYMYAYSLYKDT 122

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG- 204
                DQ  T      +   +  Y +S Y + +   +   R +L  K  E  + Y K   
Sbjct: 123 PSFNLDQSNTLTATSALQDFINAYPDSKYKEESTKLILELRGKLERKAYEKAKLYYKTSG 182

Query: 205 ----EYVAAIPRFQLVLANYSDAEHAEE-------AMARLVEAYVALALMDEAREVVSLI 253
                Y +A+        ++ D+ + EE       A   L +  +     +  +E +S  
Sbjct: 183 FNIASYKSAVIAINNFQKDFPDSGYNEELAYLKVDAEFSLAQNSLETKQKERYQEAISYH 242

Query: 254 QE---RYPQGYWARYVETL 269
           Q    +YP   + +  E +
Sbjct: 243 QAFVDKYPNSQFLKQSERM 261


>gi|193213682|ref|YP_001999635.1| TPR repeat-containing protein [Chlorobaculum parvum NCIB 8327]
 gi|193087159|gb|ACF12435.1| Tetratricopeptide TPR_2 repeat protein [Chlorobaculum parvum NCIB
           8327]
          Length = 309

 Score = 88.6 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 51/272 (18%), Positives = 88/272 (32%), Gaps = 47/272 (17%)

Query: 33  CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
           C  +     SS  +  + V+ V      Y++A   +  + + KA            F+  
Sbjct: 19  CIAISLSACSSSKLPAEQVSTVSQAESQYQRATELIDRKKYDKAIVVLESLL----FSTR 74

Query: 93  AR----KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
           A       L   A   Y   +Y  AA +    + Q P+S       + +  SY Q+    
Sbjct: 75  ATNLEDDVLHSLANSYYQKKQYLLAADMYRRLLQQTPDSPFAKSAQFELAKSYEQLSPFY 134

Query: 149 PYDQRATKLMLQYMSRIVERYT--NSPYVK-GARFY------------------------ 181
             DQ  T   +   S  ++ Y   +S   +  A  Y                        
Sbjct: 135 ELDQEYTVKAINEFSTYLDEYPLDDSAQAQSDAELYKELLKVNPTNASYKAKYDEAMAQL 194

Query: 182 ------------VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
                       +   R++LA     I   Y++  +Y AA   F +V+  Y D +  + A
Sbjct: 195 SNGAPASYSKSAILKLRDKLAHNRYSIALQYVRLKKYRAADIYFDVVINQYPDTKWVKSA 254

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGY 261
               V+  +      EAR+ +   Q+ YP   
Sbjct: 255 WLGKVDTNIRRNKWFEARQTIERFQQLYPDNS 286



 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 32/89 (35%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A+ +++ + +  A  YF+     +P     + + L          K+ +A    E +
Sbjct: 219 YSIALQYVRLKKYRAADIYFDVVINQYPDTKWVKSAWLGKVDTNIRRNKWFEARQTIERF 278

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
              YP++       Y   M +    R+  
Sbjct: 279 QQLYPDNSKEVEASYKKVMEHFSEARNPE 307


>gi|304382427|ref|ZP_07364926.1| conserved hypothetical protein [Prevotella marshii DSM 16973]
 gi|304336435|gb|EFM02672.1| conserved hypothetical protein [Prevotella marshii DSM 16973]
          Length = 274

 Score = 87.5 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 49/263 (18%), Positives = 90/263 (34%), Gaps = 24/263 (9%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
            F  A+C L+     +     +   TD  Y+   YE A        + +A    N+    
Sbjct: 4   SFLTAICGLLLLTSCAHEFNLVYRSTDYNYK---YEYAKECFARGKYQRAITLLNELIHI 60

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
                 A++ L M    +Y +  Y+ A+ + ++Y T YP+    +   + +G S  +   
Sbjct: 61  EKGTDNAQECLFMLGMAEYCSKDYEGASEVFKKYCTSYPKGFYAETAAFYIGESLYRSTP 120

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG-- 204
           +   DQ AT   +      ++ Y +S     A+  +   +++L  KE    + Y   G  
Sbjct: 121 EPRLDQSATVSAIAAYQEYLDLYQDSKLKSAAQQRLFDLQDKLVRKEYLSAKLYYNLGSY 180

Query: 205 ---------EYVAAIPRFQLVLANYSDAEHAEE-AMARLVEAYV---------ALALMDE 245
                     Y A I   Q  L +Y  +   E+ A+  +   +           L    +
Sbjct: 181 FGNCTSGGSNYEACIITAQNALKDYPYSNLREDFALLIMKSKFELAEQSVDSKRLERYQD 240

Query: 246 AREVVSLIQERYPQGYWARYVET 268
           A +        YP        E 
Sbjct: 241 AEDECYGFINEYPDSRERDTAEK 263


>gi|206889500|ref|YP_002249884.1| TPR domain protein, putative [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|206741438|gb|ACI20495.1| TPR domain protein, putative [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 287

 Score = 87.5 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 62/145 (42%), Gaps = 8/145 (5%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
           Q   +    S   ++  +E+Y+ A + +KE+ ++ A + F + ++++P   +   S    
Sbjct: 128 QKEPEQKKISPGQLKNPKEIYDSAHVDIKEKRYASARDKFQEITKNYPDFELLPNSYFWI 187

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
               YS  KY+ A    EE++ +YP+           GM++ ++        +  K    
Sbjct: 188 GETYYSEKKYEDAILAYEEFLKKYPKHDKAPGALLKEGMAFLEL--------KDKKTAKV 239

Query: 161 YMSRIVERYTNSPYVKGARFYVTVG 185
              R++ERY  S   + A+  +   
Sbjct: 240 VFERVIERYPKSKEAEIAQQKIAEI 264



 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 35/104 (33%), Gaps = 14/104 (13%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
                  I + Y +   +  +                 IG  Y    +Y  AI  ++  L
Sbjct: 163 ARDKFQEITKNYPDFELLPNSY--------------FWIGETYYSEKKYEDAILAYEEFL 208

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             Y   + A  A+ +   A++ L     A+ V   + ERYP+  
Sbjct: 209 KKYPKHDKAPGALLKEGMAFLELKDKKTAKVVFERVIERYPKSK 252



 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 50/137 (36%), Gaps = 22/137 (16%)

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
            SA V     +Y  A    +E    YP+ + +   Y+ +G +Y          ++  +  
Sbjct: 149 DSAHVDIKEKRYASARDKFQEITKNYPDFELLPNSYFWIGETYYS--------EKKYEDA 200

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
           +      +++Y       GA     + +  +A  E+          +   A   F+ V+ 
Sbjct: 201 ILAYEEFLKKYPKHDKAPGA-----LLKEGMAFLEL---------KDKKTAKVVFERVIE 246

Query: 219 NYSDAEHAEEAMARLVE 235
            Y  ++ AE A  ++ E
Sbjct: 247 RYPKSKEAEIAQQKIAE 263


>gi|332885276|gb|EGK05527.1| hypothetical protein HMPREF9456_02728 [Dysgonomonas mossii DSM
           22836]
          Length = 284

 Score = 87.1 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 65/182 (35%), Gaps = 6/182 (3%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YE A  +  ++ + +     ++    +  +   ++ L + A   +    Y  A      Y
Sbjct: 34  YEYAKKYFDQKKYGRTITLLDEILSAYTGSSKEQEILYLLAQSYFYDKDYTTATQYYTRY 93

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
             ++P+ +  +   +           D   DQ +T   +Q     +E +  S     A+ 
Sbjct: 94  YNKFPKGEFTELARFNSAYGLYLDSPDARLDQTSTYKGIQEFQNFLEYFPQSEKAPEAQD 153

Query: 181 YVTVGRNQLAAKEVEIGRYYL------KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
            +   + +LA KE    R Y       +   Y + +   +  L +Y  +E  EE    +V
Sbjct: 154 LMFKLQEKLAYKEFLAARLYYNLGLYNRENYYESCVVTAREALKSYPFSEFTEEFQILIV 213

Query: 235 EA 236
            A
Sbjct: 214 RA 215


>gi|289807701|ref|ZP_06538330.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 98

 Score = 87.1 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 16/96 (16%), Positives = 36/96 (37%), Gaps = 7/96 (7%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +    FL G     S++   D+        E+Y  A   L++ N+ +A  
Sbjct: 1   MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWKQAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
                   +PF   +++  L   +  Y   ++  +A
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDLIYAYYKKRRFAASA 89


>gi|323345700|ref|ZP_08085923.1| hypothetical protein HMPREF0663_12459 [Prevotella oralis ATCC
           33269]
 gi|323093814|gb|EFZ36392.1| hypothetical protein HMPREF0663_12459 [Prevotella oralis ATCC
           33269]
          Length = 274

 Score = 87.1 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 49/263 (18%), Positives = 85/263 (32%), Gaps = 24/263 (9%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
            F  ++C +      +     +    D  Y+   YE A     +  F +A          
Sbjct: 4   SFIASICAVFLLSNCAHEFNQVYKTNDYAYK---YEYAKECFAKGKFVRATTLLTDLITL 60

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
                   + L M A  QY +  Y+ AA    +Y   YP+ K  +   Y VG S      
Sbjct: 61  MKGTDNGEECLYMLAMSQYCSKDYEGAAQTFAKYYQSYPKGKYAEMAEYYVGQSLYMSTP 120

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG-- 204
           +   DQ  T   +      ++ Y ++   + A+  +   +++L  KE+   R Y   G  
Sbjct: 121 EPRLDQSQTISAIAAFQEYLDIYPDAKMKQMAQQRLFDLQDKLVKKELYSARLYYDLGSY 180

Query: 205 ---------EYVAAIPRFQLVLANYSDAEHAEE-AMARLVEAYV---------ALALMDE 245
                     Y A I   Q  L +Y   +  E+ ++  +   Y           L    +
Sbjct: 181 FNNCSYGGNNYEACIITAQNALKDYPFTKLREDFSVLIMKSKYELAAQSVDEKKLERYQD 240

Query: 246 AREVVSLIQERYPQGYWARYVET 268
           A +        YP   +    E 
Sbjct: 241 AEDECYGFINEYPDSKYKETAER 263


>gi|124006428|ref|ZP_01691262.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
 gi|123988085|gb|EAY27756.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
          Length = 245

 Score = 86.7 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 43/222 (19%), Positives = 82/222 (36%), Gaps = 10/222 (4%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            E Y  A+ +  +++F +A     +          +  + L  A+  Y   + Q AA   
Sbjct: 7   EEKYNGAISYYDKKDFYRAGLLLEELIPLIKGQKRSEIANLYYAYCHYYQRQRQLAAYYF 66

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           + + T +  SK V+   Y+   S  +   +   DQ  T   +      + R+  S Y + 
Sbjct: 67  KRFYTNFGASKYVEEAMYMYAFSLYKDSPEAYLDQSNTDQAIVASQNFLNRFPQSKYREE 126

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
               ++  R +L  K  E  + Y +   Y AA+  F     ++ D+ + EE     + + 
Sbjct: 127 CSRIISELRKKLETKAYENAKLYYRIRNYRAAVITFTNFQKDFPDSHYNEEVAYLKILSQ 186

Query: 238 VALA----LMDEAREVVSLIQE------RYPQGYWARYVETL 269
              A    L  +      +I+        YP   ++R  E L
Sbjct: 187 YEFAQVSTLRRQQERFQGVIKYYTEFIDAYPGSGYSRSAERL 228


>gi|332829535|gb|EGK02184.1| hypothetical protein HMPREF9455_01818 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 283

 Score = 84.8 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 65/185 (35%), Gaps = 5/185 (2%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A  +  E+ + +     ++    +  +   ++ L + A   +    Y  A      Y
Sbjct: 34  YTYAKKYFDEKKYGRTTTLLDEILSTYTGSSKEQEILFLMAQAYFYDKDYTTATQYYTRY 93

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
             ++P+    +   +           D   DQ +T   +Q     +E +  S     A+ 
Sbjct: 94  YNKFPKGDYTELARFNAAYGLYLDSPDARLDQTSTIRGIQEFQNFLEYFPQSEKAPEAQD 153

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRG-----EYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
            +   + +L+ KE    R Y   G      Y + I   +  L NY  +E +EE    +V 
Sbjct: 154 LMFKLQEKLSYKEFLAARLYFNLGLYMGNNYESCIVTSREALKNYPFSEFSEEFQILIVR 213

Query: 236 AYVAL 240
           +   L
Sbjct: 214 SRYEL 218


>gi|218779658|ref|YP_002430976.1| hypothetical protein Dalk_1811 [Desulfatibacillum alkenivorans AK-01]
 gi|218761042|gb|ACL03508.1| TPR repeat-containing protein [Desulfatibacillum alkenivorans AK-01]
          Length = 1059

 Score = 84.8 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 79/229 (34%), Gaps = 25/229 (10%)

Query: 45   DVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
            +  L+   D     E+ Y   +  ++++ + +A + FN+   +FP     R +    A  
Sbjct: 850  ESALEKYPDSPRAPEIRYHIGLCKMEQKRYGQARQAFNRTVEEFPGTVWGRLAAYHHAMS 909

Query: 104  QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
             Y  G+Y+ A    +  ++  PE       +Y  G+            Q   +       
Sbjct: 910  LYREGRYKDAQESLDRLLSMAPERGLAAEAFYHRGLCLML--------QGNNQEARLDFR 961

Query: 164  RIVERYTNSPYVKGARFYVTVGRNQLAAKEVE-IGRYYLKRGEYVAAIPRFQLVLANYSD 222
             + ERY      + A +         A   +   G  +    ++         +L  Y  
Sbjct: 962  IVRERY------EDALW---------AEHALYQTGLSFFNEQDFDNMAASMTELLRQYPQ 1006

Query: 223  AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
               A EA   L  A++ L L  +AR   + + ER P   WA      +K
Sbjct: 1007 TALAPEAWYHLGLAHMKLNLPGKARLDFTNVVERSPDSPWANQARDRLK 1055



 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 55/149 (36%), Gaps = 9/149 (6%)

Query: 39   ERQSSRDVYLDSVTDVRYQRE-VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
            + Q S D  L    +     E  Y + +  + + N  +A   F      +  A  A  +L
Sbjct: 918  DAQESLDRLLSMAPERGLAAEAFYHRGLCLMLQGNNQEARLDFRIVRERYEDALWAEHAL 977

Query: 98   LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
              +    ++   +   A+   E + QYP++      +Y +G+++ ++             
Sbjct: 978  YQTGLSFFNEQDFDNMAASMTELLRQYPQTALAPEAWYHLGLAHMKL--------NLPGK 1029

Query: 158  MLQYMSRIVERYTNSPYVKGARFYVTVGR 186
                 + +VER  +SP+   AR  +    
Sbjct: 1030 ARLDFTNVVERSPDSPWANQARDRLKELN 1058


>gi|32491283|ref|NP_871537.1| hypothetical protein WGLp534 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166490|dbj|BAC24680.1| yfiO [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 226

 Score = 84.8 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 23/149 (15%), Positives = 65/149 (43%), Gaps = 15/149 (10%)

Query: 99  MSAFVQYSAGKYQQAASLG-----EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY--- 150
               + Y+   Y+   +       +++I   P    +D++ Y+ G+    + ++      
Sbjct: 75  NIINLYYTYKDYEIENNSILEEIIDQFIESNPRCPYIDFLIYIQGLINMDLDKNTINFFI 134

Query: 151 -------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
                  + +   L L    +++ +Y NS + K ++ Y+     ++A  E++I ++Y K+
Sbjct: 135 YKKKFIENTKYAYLALNNFKKLIYKYPNSDFYKSSKNYIFHLNERIAFHELQIIKFYFKK 194

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
             Y A+  R   ++  + + + ++E++  
Sbjct: 195 HAYSASNFRILEMINKFPNTKSSKESLIY 223


>gi|317051988|ref|YP_004113104.1| outer membrane assembly lipoprotein YfiO [Desulfurispirillum
           indicum S5]
 gi|316947072|gb|ADU66548.1| outer membrane assembly lipoprotein YfiO [Desulfurispirillum
           indicum S5]
          Length = 210

 Score = 84.4 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 62/192 (32%), Gaps = 11/192 (5%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
            G  +++  D   D            E A    +   + +A + +         +    +
Sbjct: 16  AGCAKKADPDRVPDL-----------ETAHRLAERGQYDEARQEYRGVMNLADNSEAVAR 64

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
            +L  A      G++  A+   E Y+ ++P+    D     +   Y + IR +  D    
Sbjct: 65  IMLYIAHTYEKEGEWLDASIEYEHYLLRFPDHSAADDTMIRLMEMYMEQIRTIDRDVNPA 124

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           +       R    Y +SP     +         +A  E  I  +YL+  +  AA  R + 
Sbjct: 125 RKAYSLAHRFYREYQSSPRTGEVQVMEQQAFEIIAEHEAYILDFYLRTKKITAAKTRLER 184

Query: 216 VLANYSDAEHAE 227
           +  +  D     
Sbjct: 185 IERDDPDFFATP 196


>gi|213586732|ref|ZP_03368558.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-0664]
          Length = 62

 Score = 84.0 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 21/52 (40%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
            L   +  Y       A +  + ++   P   N+DYV Y+ G++   +   V
Sbjct: 1   QLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVMYMRGLTNMALDDSV 52


>gi|973202|gb|AAC13872.1| unknown [Dichelobacter nodosus]
          Length = 106

 Score = 84.0 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 37/74 (50%)

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
           N L   ++EI  +YL++G++VAA  R + +L +Y     A  A+A ++ AY  L     A
Sbjct: 1   NLLGKHDLEIADFYLRKGDFVAAAARAKNILEHYETTPSAPYALAIMIRAYRELGQKLLA 60

Query: 247 REVVSLIQERYPQG 260
            + + +    Y   
Sbjct: 61  DDAMRVFNMNYVDS 74


>gi|193214935|ref|YP_001996134.1| putative lipoprotein [Chloroherpeton thalassium ATCC 35110]
 gi|193088412|gb|ACF13687.1| putative lipoprotein [Chloroherpeton thalassium ATCC 35110]
          Length = 319

 Score = 84.0 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/247 (17%), Positives = 82/247 (33%), Gaps = 52/247 (21%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           A+  FFS+  C  V                      + ++ A    + +++  A     +
Sbjct: 28  AILGFFSLTACSSVA-------------PPVSEAPADQFDYAKRLYEAEDYQDAIMELQR 74

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
            S +     +    +   A   Y + +Y  A    +  +   P +K    VY+ + M Y 
Sbjct: 75  ISYNIRATELEDDVMFYLAQSYYKSEQYLLAVDTFKRLVRNTPGTKFARVVYFQIAMCYY 134

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYT-----------------------NSPY----- 174
            +     +DQ+ T+L +Q     ++ Y                        N  Y     
Sbjct: 135 NLSMPYQFDQQYTQLTIQQFQIYIDGYPAADSASIAAQIAELNNYADREKDNPEYQKLLG 194

Query: 175 -----------VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
                      ++ A   +   R +LA K  E    Y++   Y +A   F  V+  YSD+
Sbjct: 195 KLKAQYGLYDTLRIAEEKIRESREKLARKTFESAEQYIQLRAYKSAEVYFDEVILGYSDS 254

Query: 224 EHAEEAM 230
            + E+A+
Sbjct: 255 PYYEKAL 261



 Score = 35.9 bits (82), Expect = 6.8,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 33/72 (45%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
            +  R+ +E A  +++ + +  A  YF++    +  +    K+LL    VQ +  K+   
Sbjct: 218 EKLARKTFESAEQYIQLRAYKSAEVYFDEVILGYSDSPYYEKALLGKIDVQMTRKKWSDV 277

Query: 114 ASLGEEYITQYP 125
               E+Y  ++P
Sbjct: 278 LDTIEKYKARFP 289


>gi|332882355|ref|ZP_08449983.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332679739|gb|EGJ52708.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 289

 Score = 83.6 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/281 (16%), Positives = 98/281 (34%), Gaps = 32/281 (11%)

Query: 12  FEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ 71
           F    Y + +    IF  ++   L+        +V   +  D +     YE A  +  + 
Sbjct: 6   FAVQLYNMKR----IFLWLSGAMLLLASCNQYNNVMKTADYDYK-----YEAAKEYFVKG 56

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
            +S++     +            + L M A  ++  G +  A S  ++Y   YP+   V+
Sbjct: 57  QYSRSSVLLGELVTLMKGTSRGEECLYMLAMSEFCDGNFDVAHSYFKKYYQSYPKGVYVE 116

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
           Y  +  G S  + + D   DQ +T   ++     ++ Y  +      +  +   ++++  
Sbjct: 117 YARFYAGRSLYESVPDTRLDQSSTMAAVKEFQDFLDYYPYTHLKDRTQEMIFALQDKMVE 176

Query: 192 KEVEIGRYYLKRG-----------EYVAAIPRFQLVLANYS-DAEHAEEAMARLV-EAYV 238
           KE E  + Y   G            Y A I   +  L +Y   +    E  + ++  A  
Sbjct: 177 KEFEAAKLYYDLGSYMGNCSYGGSNYEACIVTARNALLDYPYASPERREEFSIMILRAKY 236

Query: 239 ALALMDEAREVVSLIQE----------RYPQGYWARYVETL 269
            LA      + +   ++           YP+  + +  + +
Sbjct: 237 QLAQQSVEEKRLERYRDTIDEYYGFMNEYPESKYLKDAQRI 277


>gi|319790450|ref|YP_004152083.1| tol-pal system protein YbgF [Thermovibrio ammonificans HB-1]
 gi|317114952|gb|ADU97442.1| tol-pal system protein YbgF [Thermovibrio ammonificans HB-1]
          Length = 233

 Score = 83.6 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 62/158 (39%), Gaps = 13/158 (8%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
            S++          SS+   +         +++Y +A   ++  NF KA + F Q  + +
Sbjct: 87  ISVSSAPSAPVGGSSSKQTVV-----QFGAKDLYRQAFDAMEAGNFDKAQQLFEQLVQQY 141

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
           P + +A  +L     + YS   YQ AA+  ++ I +YP    V      + + Y      
Sbjct: 142 PDSDLADNALYWIGEIYYSHNDYQTAANYFQQVIDKYPNGNKVPAAMLKLALCY------ 195

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
                  T+   + +  ++++Y  +P    A+  +   
Sbjct: 196 --RGMGNTQKAKEILKEVIDKYPGTPEASIAKVKLMEL 231



 Score = 69.4 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 43/115 (37%), Gaps = 14/115 (12%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
                  Q   ++V++Y +S     A ++              IG  Y    +Y  A   
Sbjct: 125 GNFDKAQQLFEQLVQQYPDSDLADNALYW--------------IGEIYYSHNDYQTAANY 170

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
           FQ V+  Y +      AM +L   Y  +    +A+E++  + ++YP    A   +
Sbjct: 171 FQQVIDKYPNGNKVPAAMLKLALCYRGMGNTQKAKEILKEVIDKYPGTPEASIAK 225


>gi|254448664|ref|ZP_05062122.1| TPR repeat protein [gamma proteobacterium HTCC5015]
 gi|198261672|gb|EDY85959.1| TPR repeat protein [gamma proteobacterium HTCC5015]
          Length = 277

 Score = 83.6 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 62/153 (40%), Gaps = 8/153 (5%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
            G     S      + +D   +R+ Y+ A  +L+E    +A + F     ++P    A  
Sbjct: 131 TGNSTTPSDTAEKTAPSDPAAERKAYQAAFDYLREGRHQEAIKAFEGVLNEYPDGQFADN 190

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +    A   Y + ++ +A +  ++ I  YP S  V   +  +G +Y ++        +  
Sbjct: 191 AQYWKAESHYVSKQFAEAEAGFKKVIEAYPNSNKVPDAHLKLGYTYYEL--------KQW 242

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +   + ++++VE Y  S     AR  + +   +
Sbjct: 243 EQSRKILAQVVENYPTSNAANLARKRLALLSQR 275



 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 49/151 (32%), Gaps = 22/151 (14%)

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
            +  P    A +    +AF     G++Q+A    E  + +YP+ +  D   Y    S+  
Sbjct: 142 EKTAPSDPAAERKAYQAAFDYLREGRHQEAIKAFEGVLNEYPDGQFADNAQYWKAESHYV 201

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
                    +          +++E Y NS  V  A   +                 Y + 
Sbjct: 202 S--------KQFAEAEAGFKKVIEAYPNSNKVPDAHLKLGYT--------------YYEL 239

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
            ++  +      V+ NY  +  A  A  RL 
Sbjct: 240 KQWEQSRKILAQVVENYPTSNAANLARKRLA 270



 Score = 52.0 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 44/120 (36%), Gaps = 15/120 (12%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            Q   D   + R  +  ++    ++  Y +  +   A+++                    
Sbjct: 156 YQAAFDYLREGRH-QEAIKAFEGVLNEYPDGQFADNAQYWKAESH--------------Y 200

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
              ++  A   F+ V+  Y ++    +A  +L   Y  L   +++R++++ + E YP   
Sbjct: 201 VSKQFAEAEAGFKKVIEAYPNSNKVPDAHLKLGYTYYELKQWEQSRKILAQVVENYPTSN 260



 Score = 40.5 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 30/79 (37%), Gaps = 1/79 (1%)

Query: 190 AAKEVEIGRY-YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           A ++     + YL+ G +  AI  F+ VL  Y D + A+ A     E++       EA  
Sbjct: 151 AERKAYQAAFDYLREGRHQEAIKAFEGVLNEYPDGQFADNAQYWKAESHYVSKQFAEAEA 210

Query: 249 VVSLIQERYPQGYWARYVE 267
               + E YP         
Sbjct: 211 GFKKVIEAYPNSNKVPDAH 229


>gi|330996269|ref|ZP_08320154.1| outer membrane assembly lipoprotein YfiO [Paraprevotella
           xylaniphila YIT 11841]
 gi|329573461|gb|EGG55068.1| outer membrane assembly lipoprotein YfiO [Paraprevotella
           xylaniphila YIT 11841]
          Length = 289

 Score = 82.9 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 44/281 (15%), Positives = 99/281 (35%), Gaps = 32/281 (11%)

Query: 12  FEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ 71
           F    Y + +    IF  ++   L+        +V   +  D +     YE A  +  + 
Sbjct: 6   FAVQLYNMKR----IFLWLSGAMLLLASCNQYNNVMKTADYDYK-----YEAAKEYFVKG 56

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
            +S++     +            + L M A  ++  G +  A S  ++Y   YP+   V+
Sbjct: 57  QYSRSSVLLGELVTLMKGTSRGEECLYMLAMSEFCDGNFDVAHSYFKKYYQSYPKGVYVE 116

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
           Y  +  G +  + + D   DQ +T   ++     ++ Y  +      +  +   ++++  
Sbjct: 117 YARFYAGRALYESVPDTRLDQSSTMAAVKEFQDFLDYYPYTSLKDRTQEMIFALQDKMVE 176

Query: 192 KEVEIGRYYLKRG-----------EYVAAIPRFQLVLANYS-DAEHAEEAMARLV-EAYV 238
           KE +  + Y   G            Y A I   +  L +Y   +    E  + ++  A  
Sbjct: 177 KEFQAAKLYYDLGSYMYNCSYGGSNYEACIVTARNALLDYPYASPERREEFSIMILRAKY 236

Query: 239 ALALMDEAREVVSLIQE----------RYPQGYWARYVETL 269
            LAL     + +   ++           YP+  + +  + +
Sbjct: 237 QLALQSVEEKRLDRYRDTIDEYYGFMNEYPESKYLKDAQRI 277


>gi|109946693|ref|YP_663921.1| competence lipoprotein [Helicobacter acinonychis str. Sheeba]
 gi|109713914|emb|CAJ98922.1| competence lipoprotein [Helicobacter acinonychis str. Sheeba]
          Length = 217

 Score = 82.5 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 73/201 (36%), Gaps = 11/201 (5%)

Query: 19  LYKFALTIFFSIAVCFLV-GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           +  F   +F  +AV  +  G   +  +D Y             Y+  +  +   N   A 
Sbjct: 1   MKHFKTFLFIIMAVIVVSTGCTNKKKKDEYNKPAIFW------YQGILREILFGNLETAD 54

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
            Y++    +   + +  +++L          +Y  A+   +EYI ++    NVDY+ +L 
Sbjct: 55  NYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTEDNVDYLTFLK 114

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE-- 195
             S+    ++   DQ      +  +   +E+Y NS Y     +     +  L   E+   
Sbjct: 115 LQSHYYAFKNHSKDQEFISNSIVNLGEFIEKYPNSRYRPYVEYM--QVKFILGQNELNRA 172

Query: 196 IGRYYLKRGEYVAAIPRFQLV 216
           I   Y KR +        + V
Sbjct: 173 IANVYRKRHKPEGVKRYLERV 193


>gi|302342342|ref|YP_003806871.1| hypothetical protein Deba_0907 [Desulfarculus baarsii DSM 2075]
 gi|301638955|gb|ADK84277.1| Tetratricopeptide TPR_2 repeat protein [Desulfarculus baarsii DSM
           2075]
          Length = 1085

 Score = 82.5 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 87/212 (41%), Gaps = 34/212 (16%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS- 115
              +  +    L+E+++++A   F +    FP      +++   A   Y   + + AA  
Sbjct: 448 ADALLSRGRSALEERDYNQALLAFQELMDRFPKDQAVGEAMFRFADAFYYENERKMAAKF 507

Query: 116 -----LGEEYITQYPESKNVDYVYYLVG---MSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
                  +  I  +P+S  V +   ++G   M++ +  R +            Y   ++ 
Sbjct: 508 HDVMFNYQRAIDLHPQSDQVPWALLMMGKASMAFGEPFRGMG-----------YFEIVIN 556

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y  SPYV  A        N+        G  + ++G++  A+  ++ VLA+Y  +++  
Sbjct: 557 DYPKSPYVPLA------LVNR--------GGAFQEQGKFAMAVAEYERVLASYPQSDYRV 602

Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           +A   L +AY  +A    A +V+  + +  PQ
Sbjct: 603 DAQWGLAKAYFGMARFRAASDVLLEMAKENPQ 634



 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/288 (12%), Positives = 89/288 (30%), Gaps = 70/288 (24%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRY-QREVYEKAVLFLKEQNFSKAYEYFN 81
           AL +    ++ F   +      ++ ++      Y    +  +   F ++  F+ A   + 
Sbjct: 530 ALLMMGKASMAFGEPFRGMGYFEIVINDYPKSPYVPLALVNRGGAFQEQGKFAMAVAEYE 589

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE-SKNVDYVYYLVGMS 140
           +    +P +     +    A   +   +++ A+ +  E   + P+       + Y +G +
Sbjct: 590 RVLASYPQSDYRVDAQWGLAKAYFGMARFRAASDVLLEMAKENPQMHLQNPELLYYLGEA 649

Query: 141 YAQM---------------IRDVPYD--------------QRATKLMLQYMSRIVERYTN 171
             Q+               IR    D              Q   +   +  +++++ Y +
Sbjct: 650 EFQLRDYNKARFYFLWALNIRPDMRDGDIILTRVGDSYGYQGQDRAAREIYAQVIDMYPD 709

Query: 172 SP-----------------------------------YVKGARFYVTVGRNQLAAKEVEI 196
           +                                    Y + A  Y      QLA  ++ +
Sbjct: 710 TDGALVARIRLAESPEKDIEHPWDIFQVKADLDAYRTYKEIADKYADRQVGQLAKVKLAV 769

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
             Y+ K+ E+V AI   +  L    +     E    +  A  A+ L++
Sbjct: 770 --YHYKKNEFVKAIDTLEKFLQLNPNTPFRPEVDYTMNLA--AIGLLE 813



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 61/199 (30%), Gaps = 23/199 (11%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
               +      +   YF     D+P +     +L+         GK+  A +  E  +  
Sbjct: 535 GKASMAFGEPFRGMGYFEIVINDYPKSPYVPLALVNRGGAFQEQGKFAMAVAEYERVLAS 594

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN-SPYVKGARFYV 182
           YP+S       + +  +Y  M R         +     +  + +             +Y+
Sbjct: 595 YPQSDYRVDAQWGLAKAYFGMAR--------FRAASDVLLEMAKENPQMHLQNPELLYYL 646

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
                QL  ++    R+Y            F   L    D    +  + R+ ++Y     
Sbjct: 647 GEAEFQL--RDYNKARFY------------FLWALNIRPDMRDGDIILTRVGDSYGYQGQ 692

Query: 243 MDEAREVVSLIQERYPQGY 261
              ARE+ + + + YP   
Sbjct: 693 DRAAREIYAQVIDMYPDTD 711



 Score = 46.3 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 42/99 (42%), Gaps = 1/99 (1%)

Query: 75  KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
            AY  + + +  +    V + + +  A   Y   ++ +A    E+++   P +     V 
Sbjct: 742 DAYRTYKEIADKYADRQVGQLAKVKLAVYHYKKNEFVKAIDTLEKFLQLNPNTPFRPEVD 801

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMS-RIVERYTNS 172
           Y + ++   ++  +  + +  +LM  Y+  R++    NS
Sbjct: 802 YTMNLAAIGLLEGLRAENKPMELMDAYLRNRVLLTRPNS 840


>gi|256421366|ref|YP_003122019.1| hypothetical protein Cpin_2327 [Chitinophaga pinensis DSM 2588]
 gi|256036274|gb|ACU59818.1| TPR repeat-containing protein [Chitinophaga pinensis DSM 2588]
          Length = 1023

 Score = 82.1 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 49/228 (21%), Positives = 84/228 (36%), Gaps = 30/228 (13%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFV 103
           + S  +   Q   Y      LK +++++A ++F    R       A +    + L SA  
Sbjct: 510 VPSSGEANAQTASYNMGYALLKAEDYTRALQHFEAAQRT--TGPNAARITTDAALRSADC 567

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
            Y    Y +A +L E+ I         DY  Y        +I  +   Q  T   +  + 
Sbjct: 568 YYMLKDYPKAMALYEKIIANNQ--PGSDYATYQK-----SIILGI---QGKTNEKVALLK 617

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
           ++  ++ +S +   A              ++EI   YL   +Y  AIP  + VL    + 
Sbjct: 618 QLGNKFPSSGFGNDA--------------DLEIANTYLAEEKYNEAIPYLENVLQKQPNG 663

Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
            +A  A+ +L   Y      D+A      + E+YP    A    T VK
Sbjct: 664 PNAPRALLKLGLCYFNKDNDDKALSYYRQVIEKYPNSPEANAALTAVK 711



 Score = 35.5 bits (81), Expect = 7.5,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 67/211 (31%), Gaps = 43/211 (20%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A  +  +    +A   + + + +        ++    A+  ++   +Q+A       
Sbjct: 122 YQLAKYYFHQNKLKEAIPLYEKANIENLSNAEIAEAKFELAYCYFNVKDFQKAQ------ 175

Query: 121 ITQYPESKNVDYV---YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
               P   ++  V   YY+    Y   I             L    R+V       Y   
Sbjct: 176 ----PLFGSIKEVQGKYYMSANYYYGFIAYYNR---QYNEALTSFQRVVN---EPKYSAI 225

Query: 178 ARFYVTVG------RNQL----------------AAKEVEIGRYYLKRGEYVAAIPRFQL 215
             +Y+         ++QL                A  +  +G+ Y +R EY  A+P  Q 
Sbjct: 226 VPYYIAEIYYFQNKKDQLISYGEPLVKKGGLYYEAELKQLLGQTYFERKEYQKALPYLQE 285

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEA 246
              N  +    +E + +L  +Y       +A
Sbjct: 286 FNDNADEVR--KEDIYQLSYSYYQTGNFSKA 314


>gi|281358385|ref|ZP_06244867.1| DNA uptake lipoprotein-like protein [Victivallis vadensis ATCC
           BAA-548]
 gi|281315212|gb|EFA99243.1| DNA uptake lipoprotein-like protein [Victivallis vadensis ATCC
           BAA-548]
          Length = 359

 Score = 81.7 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 67/162 (41%)

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
            K+ E F +     PFA  A ++ L  A++    GK +++       I  +P++K   Y 
Sbjct: 135 DKSIEVFEKALDRAPFAESAPEARLRLAYLFDQKGKVKESLEQLRIIIRDFPDAKACRYA 194

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
           Y  +     ++ R    D    +   +     +E+Y ++P     +  +   R+  A + 
Sbjct: 195 YLALANGLYELSRRGDGDGAYNRESYELFKTFLEKYPDAPEAPWVKVRMVRSRDIQAGRL 254

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
            E+  YY + G   A+      VL +Y D   A+ +   LV+
Sbjct: 255 YELAEYYERAGRKEASERYLAQVLKDYPDTTSADASERLLVK 296


>gi|257461254|ref|ZP_05626351.1| competence lipoprotein [Campylobacter gracilis RM3268]
 gi|257441282|gb|EEV16428.1| competence lipoprotein [Campylobacter gracilis RM3268]
          Length = 215

 Score = 81.3 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 70/193 (36%), Gaps = 10/193 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +   +  +   + + F+ G   +   +++  S          Y K +  +   +   A +
Sbjct: 1   MTNLSKILSALLFIAFIGGCSGKGDGELFNLSPEAW------YSKILEDINNASMEDAEK 54

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
           ++   S +   + +  +  L+ A+       Y++A    +EYI  Y  ++ ++Y  +L  
Sbjct: 55  HYTSFSSEHIASPLLEEMTLIMAWAFVEDENYEKANKYLDEYIRLYGTTQKIEYARFLKI 114

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE--I 196
            +          +Q+     +  + + +  Y  S Y       +T  R  LA  ++   I
Sbjct: 115 RANFDSFSRPNRNQKLMLNSIDEIRKFIAEYPQSEYRPLLETMLTKLR--LAEHQLNIDI 172

Query: 197 GRYYLKRGEYVAA 209
              Y +     +A
Sbjct: 173 KDLYQRTDRESSA 185


>gi|325295382|ref|YP_004281896.1| tol-pal system protein YbgF [Desulfurobacterium thermolithotrophum
           DSM 11699]
 gi|325065830|gb|ADY73837.1| tol-pal system protein YbgF [Desulfurobacterium thermolithotrophum
           DSM 11699]
          Length = 242

 Score = 81.3 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 53/130 (40%), Gaps = 8/130 (6%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
             +++Y++A   ++  +   A   F +    +P + +A  +L     + YS   Y+ AA+
Sbjct: 119 SDKDLYKQAFNSMEAGDLETAKSTFEKLVEQYPDSPLADNALYWIGEIYYSHNDYETAAN 178

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
             ++ I +YP    V      + +SY  M               +   +++E+Y N+P  
Sbjct: 179 YFKQVIEKYPNGNKVPAAMLKLALSYKGM--------GELDKAKEMFQQVIEKYPNTPEA 230

Query: 176 KGARFYVTVG 185
             A+  +   
Sbjct: 231 GIAKAKLMEI 240



 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 14/109 (12%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              +       ++VE+Y +SP    A ++              IG  Y    +Y  A   
Sbjct: 134 GDLETAKSTFEKLVEQYPDSPLADNALYW--------------IGEIYYSHNDYETAANY 179

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           F+ V+  Y +      AM +L  +Y  +  +D+A+E+   + E+YP   
Sbjct: 180 FKQVIEKYPNGNKVPAAMLKLALSYKGMGELDKAKEMFQQVIEKYPNTP 228



 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 34/147 (23%), Positives = 53/147 (36%), Gaps = 30/147 (20%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           + K L   AF    AG  + A S  E+ + QYP+S   D   Y +G  Y           
Sbjct: 119 SDKDLYKQAFNSMEAGDLETAKSTFEKLVEQYPDSPLADNALYWIGEIYYS--------H 170

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA----KEVEIGRYYLKRGEYVA 208
              +    Y  +++E+Y N   V  A   + +    +      KE+              
Sbjct: 171 NDYETAANYFKQVIEKYPNGNKVPAAMLKLALSYKGMGELDKAKEM-------------- 216

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVE 235
               FQ V+  Y +   A  A A+L+E
Sbjct: 217 ----FQQVIEKYPNTPEAGIAKAKLME 239



 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 35/91 (38%), Gaps = 1/91 (1%)

Query: 41  QSSRDVYLDSVTDVRYQR-EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
           +S+ +  ++   D       +Y    ++    ++  A  YF Q    +P       ++L 
Sbjct: 140 KSTFEKLVEQYPDSPLADNALYWIGEIYYSHNDYETAANYFKQVIEKYPNGNKVPAAMLK 199

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
            A      G+  +A  + ++ I +YP +   
Sbjct: 200 LALSYKGMGELDKAKEMFQQVIEKYPNTPEA 230


>gi|312129473|ref|YP_003996813.1| outer membrane assembly lipoprotein yfio [Leadbetterella byssophila
           DSM 17132]
 gi|311906019|gb|ADQ16460.1| outer membrane assembly lipoprotein YfiO [Leadbetterella byssophila
           DSM 17132]
          Length = 296

 Score = 80.9 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 94/260 (36%), Gaps = 24/260 (9%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
             +    +    R+ SR      V       E Y  AV + K+ ++ KA   F + +   
Sbjct: 8   LLVLSVLIFSCSREFSR------VQKKGTTEEKYAAAVKYYKKADYYKASVLFEEIAPLL 61

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
                A ++   +A+  Y  G YQ ++ L   +   Y  S   +  YY+   S  +    
Sbjct: 62  KGDSTAERTQFYNAYANYYLGNYQMSSYLFNTFYATYNNSPFAEEAYYMYAYSMYKDTPP 121

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG--- 204
              DQ  T   +  +   +  Y +S Y       +   R +L  K  E  + Y K     
Sbjct: 122 YNLDQTNTLTAIDALQTFINSYPDSKYADDCAKNLQDLRERLERKSYEKAKQYFKTRDPS 181

Query: 205 -----EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL----------MDEAREV 249
                 Y+A++        ++ D+++ EE  A  + A   LA            ++A E 
Sbjct: 182 WGGLSNYLASVVTIDNFKKDFPDSKYNEELSAMQITAQYELADLSLFNKQKERYNQAIEY 241

Query: 250 VSLIQERYPQGYWARYVETL 269
            +   ++YP   + + +E L
Sbjct: 242 YNKFIDKYPNSKYLKDLEKL 261



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 29/226 (12%), Positives = 71/226 (31%), Gaps = 26/226 (11%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG---- 108
           D   +R  +  A       N+  +   FN     +  +  A ++  M A+  Y       
Sbjct: 64  DSTAERTQFYNAYANYYLGNYQMSSYLFNTFYATYNNSPFAEEAYYMYAYSMYKDTPPYN 123

Query: 109 ----KYQQAASLGEEYITQYPESKNVDYVY--------------YLVGMSYAQMIRDVPY 150
                   A    + +I  YP+SK  D                 Y     Y +       
Sbjct: 124 LDQTNTLTAIDALQTFINSYPDSKYADDCAKNLQDLRERLERKSYEKAKQYFKTRDPSWG 183

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
                   +  +    + + +S Y +         + +LA   +    +  ++  Y  AI
Sbjct: 184 GLSNYLASVVTIDNFKKDFPDSKYNEELSAMQITAQYELADLSL----FNKQKERYNQAI 239

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
             +   +  Y ++++ ++      ++   L  + E  + +  ++++
Sbjct: 240 EYYNKFIDKYPNSKYLKDLEKLYDKSLKGLQKVAEIEKQIEEMKKQ 285


>gi|32266343|ref|NP_860375.1| hypothetical protein HH0844 [Helicobacter hepaticus ATCC 51449]
 gi|32262393|gb|AAP77441.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
          Length = 213

 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/150 (22%), Positives = 62/150 (41%), Gaps = 4/150 (2%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YE  +  +   N   A  YF+    +   + +  +++L+         +Y  AA   +EY
Sbjct: 34  YESIIKEINFGNLEGADGYFSSLQSEHINSPLIPEAMLILGQAHMEKDEYLLAAFYFDEY 93

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           + +Y   +N DYV YL  ++     ++   DQ      ++     ++ Y +S Y     +
Sbjct: 94  LKRYSSLENQDYVRYLKILTNFYGFKNYSKDQEFITQSIEDTKSFLQMYPHSRYAPYVEY 153

Query: 181 YVTVGRNQLAAKEVE--IGRYYLKRGEYVA 208
                + QL   E+   I R Y K+G+  A
Sbjct: 154 --IDLKFQLGQIELNRSIARVYQKQGKTQA 181


>gi|53804446|ref|YP_113695.1| hypothetical protein MCA1231 [Methylococcus capsulatus str. Bath]
 gi|53758207|gb|AAU92498.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath]
          Length = 285

 Score = 80.2 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 53/144 (36%), Gaps = 8/144 (5%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
           SR V     +D   +   Y++A   LK+  F++A + F   +  +P    A         
Sbjct: 146 SRPVAPPPASDGAAREAAYQRAFGTLKDGRFAEAIKEFKSFTARYPSGDYADNGQYWLGE 205

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y    +  A    ++ I  +P+S  V     L  ++Y      +  D        Q +
Sbjct: 206 AHYVNRDFSSAKEAFQKLIKNFPQSAKVPDAA-LK-LAY------IESDTGQIASARQML 257

Query: 163 SRIVERYTNSPYVKGARFYVTVGR 186
           + +++RY  S   K A   +   +
Sbjct: 258 NDVIKRYPGSSAAKQAEKRLQKMQ 281



 Score = 59.4 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 51/143 (35%), Gaps = 22/143 (15%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           AR++    AF     G++ +A    + +  +YP     D   Y +G ++      V  D 
Sbjct: 159 AREAAYQRAFGTLKDGRFAEAIKEFKSFTARYPSGDYADNGQYWLGEAHY-----VNRDF 213

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
            + K       ++++ +  S  V  A   +    +                G+  +A   
Sbjct: 214 SSAKEA---FQKLIKNFPQSAKVPDAALKLAYIES--------------DTGQIASARQM 256

Query: 213 FQLVLANYSDAEHAEEAMARLVE 235
              V+  Y  +  A++A  RL +
Sbjct: 257 LNDVIKRYPGSSAAKQAEKRLQK 279



 Score = 49.0 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 47/130 (36%), Gaps = 15/130 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            Q       D R     ++       RY +  Y    ++++                 Y+
Sbjct: 164 YQRAFGTLKDGRFA-EAIKEFKSFTARYPSGDYADNGQYWLGEAH-------------YV 209

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            R  + +A   FQ ++ N+  +    +A  +L         +  AR++++ + +RYP   
Sbjct: 210 NRD-FSSAKEAFQKLIKNFPQSAKVPDAALKLAYIESDTGQIASARQMLNDVIKRYPGSS 268

Query: 262 WARYVETLVK 271
            A+  E  ++
Sbjct: 269 AAKQAEKRLQ 278


>gi|194337847|ref|YP_002019641.1| putative lipoprotein [Pelodictyon phaeoclathratiforme BU-1]
 gi|194310324|gb|ACF45024.1| putative lipoprotein [Pelodictyon phaeoclathratiforme BU-1]
          Length = 298

 Score = 79.8 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 44/280 (15%), Positives = 89/280 (31%), Gaps = 48/280 (17%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
            + +    +A   L+     SS+   + + T V    E Y KAV    ++++  A     
Sbjct: 7   ISRSALMLLATGLLMSSGCSSSKPAKISATTRV---NEAYGKAVKMYDKRDYQGAALGLE 63

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV---YYLVG 138
                     +    L + A   Y +G+Y  A    E +     +  +  Y     +++ 
Sbjct: 64  SLLFTSRATALEDDVLFLLAQSYYHSGQYLLA---AEMFTKLQQQISSTPYARTAQFMLA 120

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYT---NSPYVKG------------------ 177
            SY Q+      DQ  T   +   +  ++ Y    +S                       
Sbjct: 121 KSYEQLSPHFELDQEHTAKAITQFATYLDLYPMVDSSKIASDVTTYRELLKINPDNASYK 180

Query: 178 ------------------ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
                             A   + V R +LA     I R Y++  +Y AA   +  ++  
Sbjct: 181 QSYATATTQFARIDTLRYAEKAIPVLREKLAKNTFFIARQYVQLKKYKAAGIFYDELIKR 240

Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           Y D  + + A    ++  +      +A + +    + +P 
Sbjct: 241 YPDTVYIKPAWEGKIDVLMKRKKWFDASQALDQYLQNFPD 280


>gi|254469021|ref|ZP_05082427.1| hypothetical protein KB13_1247 [beta proteobacterium KB13]
 gi|207087831|gb|EDZ65114.1| hypothetical protein KB13_1247 [beta proteobacterium KB13]
          Length = 320

 Score = 79.4 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 60/142 (42%), Gaps = 8/142 (5%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
               L  + D   ++ ++  A   +    + +A+E F++    +P +  A ++     ++
Sbjct: 182 ESDNLPPLIDEEQEQNMFSDAEGLMTSTKYKEAFELFDRFVTAYPNSQRAVEAKKNIGYI 241

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           Q++   Y+ + S  ++ I  +P+ + +  + Y    +  Q+ R             Q + 
Sbjct: 242 QFALKNYKASLSTYDKLIANHPDHELMPEILYGKANTEIQLTR--------ITKAKQTLR 293

Query: 164 RIVERYTNSPYVKGARFYVTVG 185
           RI++ Y N+  ++ A+  +   
Sbjct: 294 RIIKEYPNASIIESAKKRLKAL 315



 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 41/116 (35%), Gaps = 14/116 (12%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           K   +   R V  Y NS     A+  +   +  L                Y A++  +  
Sbjct: 212 KEAFELFDRFVTAYPNSQRAVEAKKNIGYIQFAL--------------KNYKASLSTYDK 257

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           ++AN+ D E   E +       + L  + +A++ +  I + YP        +  +K
Sbjct: 258 LIANHPDHELMPEILYGKANTEIQLTRITKAKQTLRRIIKEYPNASIIESAKKRLK 313


>gi|157164633|ref|YP_001467200.1| tRNA (guanine-N(1)-)-methyltransferase [Campylobacter concisus
           13826]
 gi|112801444|gb|EAT98788.1| putative lipoprotein [Campylobacter concisus 13826]
          Length = 215

 Score = 79.4 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 73/192 (38%), Gaps = 8/192 (4%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +F+  +     +    G   + +    L          E Y + +  +K+ +   A +
Sbjct: 1   MKRFSKFLAVVALLGLFSGCAEKYTELYNL-------TPDEWYAQVIADIKDGDLESADK 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES-KNVDYVYYLV 137
           ++   + +   + +  + LL+ A    +  +Y  A    +EYI +Y ++    ++  YL 
Sbjct: 54  HYVSMASEHVASPLLEQILLILAQAHANDEEYLMANHYLDEYIKRYGDNGPKTEFAQYLK 113

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +          +Q+  +  +  + + +  Y N+ Y       +   +  L   +++I 
Sbjct: 114 IKANFDSFTQPNRNQKLMEDSVTEIEKFLYMYPNTEYKPLIETMLIKFKLALYFLDMQIA 173

Query: 198 RYYLKRGEYVAA 209
             Y + G  V+A
Sbjct: 174 DLYKRTGRDVSA 185


>gi|114330318|ref|YP_746540.1| TPR repeat-containing protein [Nitrosomonas eutropha C91]
 gi|114307332|gb|ABI58575.1| Tetratricopeptide TPR_2 repeat protein [Nitrosomonas eutropha C91]
          Length = 273

 Score = 79.4 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 59/140 (42%), Gaps = 22/140 (15%)

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
           +++   +A+  +  G Y  + +  E +++++P+S       Y +G ++  M        R
Sbjct: 152 QRNRYDAAYALFKDGDYSGSIASFESFLSRHPQSALAPAAAYWIGNAHYAM--------R 203

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
                +    R++E Y +SP V      +       A+ +VEIG+         AA    
Sbjct: 204 NFDKAIAAQQRLIETYPDSPKVPDGLLNM-------ASSQVEIGQ-----KA--AARKTL 249

Query: 214 QLVLANYSDAEHAEEAMARL 233
             ++ NY   E AE+A  RL
Sbjct: 250 VNLITNYPGTEAAEKAKRRL 269



 Score = 75.2 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 46/126 (36%), Gaps = 8/126 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A    K+ ++S +   F       P + +A  +        Y+   + +A +  +  
Sbjct: 156 YDAAYALFKDGDYSGSIASFESFLSRHPQSALAPAAAYWIGNAHYAMRNFDKAIAAQQRL 215

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           I  YP+S  V       G+      + V   Q+A     + +  ++  Y  +   + A+ 
Sbjct: 216 IETYPDSPKVPD-----GLLNMASSQ-VEIGQKAA--ARKTLVNLITNYPGTEAAEKAKR 267

Query: 181 YVTVGR 186
            +   +
Sbjct: 268 RLGSLK 273



 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 35/111 (31%), Gaps = 14/111 (12%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
            +      + R+  S     A ++              IG  +     +  AI   Q ++
Sbjct: 171 SIASFESFLSRHPQSALAPAAAYW--------------IGNAHYAMRNFDKAIAAQQRLI 216

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
             Y D+    + +  +  + V +     AR+ +  +   YP    A   + 
Sbjct: 217 ETYPDSPKVPDGLLNMASSQVEIGQKAAARKTLVNLITNYPGTEAAEKAKR 267



 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 26/61 (42%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            K G+Y  +I  F+  L+ +  +  A  A   +  A+ A+   D+A      + E YP  
Sbjct: 163 FKDGDYSGSIASFESFLSRHPQSALAPAAAYWIGNAHYAMRNFDKAIAAQQRLIETYPDS 222

Query: 261 Y 261
            
Sbjct: 223 P 223


>gi|291276529|ref|YP_003516301.1| putative lipoprotein [Helicobacter mustelae 12198]
 gi|290963723|emb|CBG39557.1| putative lipoprotein [Helicobacter mustelae 12198]
          Length = 214

 Score = 79.0 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 73/188 (38%), Gaps = 10/188 (5%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
            + + ++ A    +G   +  ++ +             Y++ +  +K  +   A  +F+ 
Sbjct: 3   IIFVIYATAFLVFLGCSSKKEKNEFNKPAMYW------YQEMLKEIKSGSLENADNHFSS 56

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
              +   + +   ++L+         ++  A    +EY+ +Y  + NVDY+ YL   ++ 
Sbjct: 57  LQSEHINSPLLPDAMLILGKAHQVEKEFVLADYYFDEYLKRYATADNVDYITYLKIQTHY 116

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE--IGRYY 200
               +   DQ+  +  +  +   ++++ +S Y+          R  L   E+   I   Y
Sbjct: 117 LAFVNYSKDQQFLENAVIEIQNFLDKFPDSRYLD--LIKTMQLRLLLGRNELNRAIANVY 174

Query: 201 LKRGEYVA 208
            K+ +  A
Sbjct: 175 AKQKKPNA 182


>gi|212550503|ref|YP_002308820.1| hypothetical protein CFPG_146 [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212548741|dbj|BAG83409.1| conserved hypothetical protein [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 280

 Score = 78.6 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 80/198 (40%), Gaps = 10/198 (5%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YE A  +  ++ +++A       +         ++SL + A   Y    Y  A+   + Y
Sbjct: 35  YETAKKYFDDKKYNQAIILLEGAAPLMKHTAYEKESLYLLAQSFYKKKDYASASRYFQSY 94

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
            T +P+ +  +  ++    S         +DQ  T   +Q +   ++ Y+ S   +  ++
Sbjct: 95  YTSFPKGEYTESAHFYSAYSLYLASPSARFDQSDTYKAIQQLQDFLKYYSQSNKKEIVKY 154

Query: 181 YVTVGRNQLAAKEVEIGRYYLKR----------GEYVAAIPRFQLVLANYSDAEHAEEAM 230
            ++  + +LA KE+   R Y             G Y++ I   Q  L +Y  +++ E+ +
Sbjct: 155 ALSELQEKLALKELMAIRLYYDLGNYLLYPFPGGNYLSCIITAQNALKSYPFSKYREDFI 214

Query: 231 ARLVEAYVALALMDEARE 248
             +  A   +AL    +E
Sbjct: 215 YYIFMARYKIALQSIKKE 232


>gi|189347955|ref|YP_001944484.1| lipoprotein [Chlorobium limicola DSM 245]
 gi|189342102|gb|ACD91505.1| putative lipoprotein [Chlorobium limicola DSM 245]
          Length = 287

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 66/208 (31%), Gaps = 39/208 (18%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y KA+ +  +++F+ A                    L + A   Y + +Y  A  +    
Sbjct: 31  YGKALGYYNKEDFNDAALELEPVIFTSRATAFEDDVLFLLAQSYYKSEQYLLAVDMYSRL 90

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT--NS------ 172
           + Q P S       + +  S+ Q+      D   T   +Q  +  +E Y   +S      
Sbjct: 91  LQQVPSSPFARQAQFQLAKSHEQLSTHFELDHEHTLKAIQQFALYLEVYPGRDSAQITAD 150

Query: 173 -------------------PYV------------KGARFYVTVGRNQLAAKEVEIGRYYL 201
                               Y               A+  +   R +LA     I R Y+
Sbjct: 151 ADMYRELLKVNPANESYKERYANFQSELEGVESQDYAQKAIVKLREKLAKNTYYIARQYI 210

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEA 229
           +  +Y A+   F  V+  Y D  + E+A
Sbjct: 211 QLKKYKASGIYFDEVIKRYPDTIYFEQA 238



 Score = 40.5 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 28/66 (42%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A  +++ + +  +  YF++  + +P      ++      V     K+  A+   + Y
Sbjct: 203 YYIARQYIQLKKYKASGIYFDEVIKRYPDTIYFEQAWKGRIDVLIKRKKWFDASQAVDRY 262

Query: 121 ITQYPE 126
           +  +P+
Sbjct: 263 LQLFPD 268


>gi|313681433|ref|YP_004059171.1| outer membrane assembly lipoprotein yfio [Sulfuricurvum kujiense
           DSM 16994]
 gi|313154293|gb|ADR32971.1| outer membrane assembly lipoprotein YfiO [Sulfuricurvum kujiense
           DSM 16994]
          Length = 258

 Score = 77.9 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 68/184 (36%), Gaps = 10/184 (5%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
            IA+  L+      S+D+   +     +    YEK V  +   N  +A  YF+    +  
Sbjct: 6   LIAITTLILLTGCGSKDLEEFNKPAEYW----YEKMVTAVSNGNLERADSYFSSLQSEHI 61

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
            +    ++ ++ A    +  +Y  +    +EYI +Y   +  +Y  +L   +    + + 
Sbjct: 62  SSPFLSEATMIMAQAHMAHEEYLLSEHFLDEYIRRYATPEGREYAEFLKIKAKFLALPNP 121

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVK---GARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
             DQ      L  +      Y NS Y+         + + R  L     +I   Y + G+
Sbjct: 122 GRDQGLIDETLNSVETFKRSYPNSMYLPLVHSMETQLQLARGVLNE---QIAELYERLGK 178

Query: 206 YVAA 209
             AA
Sbjct: 179 PKAA 182


>gi|213585772|ref|ZP_03367598.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-0664]
          Length = 75

 Score = 77.5 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 30/82 (36%), Gaps = 7/82 (8%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +    +  +    FL G     S++   D+        E+Y  A   L++ N+ +A  
Sbjct: 1   MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWKQAIT 53

Query: 79  YFNQCSRDFPFAGVARKSLLMS 100
                   +PF   +++  L  
Sbjct: 54  QLEALDNRYPFGPYSQQVQLDL 75


>gi|268679494|ref|YP_003303925.1| outer membrane assembly lipoprotein YfiO [Sulfurospirillum
           deleyianum DSM 6946]
 gi|268617525|gb|ACZ11890.1| outer membrane assembly lipoprotein YfiO [Sulfurospirillum
           deleyianum DSM 6946]
          Length = 215

 Score = 77.5 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 75/191 (39%), Gaps = 11/191 (5%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           K A  +  +  + F+ G   +  +DV+    T        Y +    +K Q+  KA   +
Sbjct: 2   KIANVLIVASLMAFISGCASK-EKDVFNMPATYW------YGEITKEIKNQDLEKADSLY 54

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
              + +   + +  +++LM A       +Y  A    +EY+ +Y   +N D+V ++   +
Sbjct: 55  TSLASEHVESPLLPEAMLMLANAHSQDEEYLLANFYLDEYLRRYGNKENADHVRFMKIKA 114

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV--EIGR 198
             +   +   +Q+     +      + RY +S +   A+    + R Q+    +   I  
Sbjct: 115 NYEAFPNPNRNQQLLLDTIVQTKDFLVRYPDSKFAPLAQT--ILVRLQMGEYFLDENIQS 172

Query: 199 YYLKRGEYVAA 209
            Y +  +  AA
Sbjct: 173 LYARIDKPEAA 183


>gi|307638050|gb|ADN80500.1| competence lipoprotein [Helicobacter pylori 908]
          Length = 220

 Score = 77.5 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 75/201 (37%), Gaps = 8/201 (3%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           +L  F + +F ++A+  +        +     +   + + + +  + +      N   A 
Sbjct: 2   RLKHFKIFLFIAMAMIVIGTGCTNKKKKKDEYNKPAIFWYQGILREILFA----NLETAD 57

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
            Y++    +   + +  +++L          +Y  A+   +EYI ++    NVDY+ +L 
Sbjct: 58  NYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVDYLTFLK 117

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE-- 195
             S+    ++   DQ      +  +   +E+Y NS Y     +     +  L   E+   
Sbjct: 118 LQSHYYAFKNHSKDQEFISNAIVSLGEFIEKYPNSRYRPYVEYM--QIKFILGQNELNRA 175

Query: 196 IGRYYLKRGEYVAAIPRFQLV 216
           I   Y KR +        + +
Sbjct: 176 IANVYKKRHKPEGVKRYLERI 196


>gi|255321373|ref|ZP_05362533.1| outer membrane assembly lipoprotein YfiO [Campylobacter showae
           RM3277]
 gi|255301526|gb|EET80783.1| outer membrane assembly lipoprotein YfiO [Campylobacter showae
           RM3277]
          Length = 215

 Score = 77.1 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 73/194 (37%), Gaps = 17/194 (8%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
              L KF   +FF   VC + G   + +    L          + Y + +  +K ++   
Sbjct: 1   MKNLIKFLSAVFF---VCLIGGCADKYTELYNL-------TPDQWYSEIIGDIKNRDLES 50

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY----PESKNVD 131
           A +++   S +   + +  + LL+ A    +  +Y  A    +EY+ +Y    P S+   
Sbjct: 51  ADKHYTAMSSEHVASPLLEQILLILAQAHANDEEYLMANFYLDEYLKRYGDGGPRSE--- 107

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
           +  YL   +          +Q+  +  +  + + +  Y N+ Y       +   +  +  
Sbjct: 108 FAQYLKIKANFDSFSQPNRNQKLMQDSIAEIEKFLYIYPNTQYRPLIETMLVKFKLAIYN 167

Query: 192 KEVEIGRYYLKRGE 205
            +V+I   Y + G 
Sbjct: 168 LDVQIADLYERTGR 181


>gi|332704838|ref|ZP_08424926.1| tetratricopeptide domain-containing protein [Desulfovibrio
           africanus str. Walvis Bay]
 gi|332554987|gb|EGJ52031.1| tetratricopeptide domain-containing protein [Desulfovibrio
           africanus str. Walvis Bay]
          Length = 1057

 Score = 77.1 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 82/220 (37%), Gaps = 31/220 (14%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQ 104
             +    +    E+Y+ AV       + +A E + Q   + P     +  + L   A   
Sbjct: 392 VDEKGKPILTHEELYQVAVRHFINSEYKEAIEVYKQLRAN-PEVKGNMREEVLHNLAQAS 450

Query: 105 YSA------GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
           Y+         + +     E  I   P+S+ V      +G+++ + + ++P         
Sbjct: 451 YNLYRDTLRDHFHEVVGALEAAINFKPDSEKVPQALLQLGLAHLR-VDNIP-------EA 502

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
             Y   + ++Y     V                 +   G YY ++G+Y  A   +Q+V+ 
Sbjct: 503 SAYFKILTDKYPQDLNVPYI--------------DFYWGDYYYRKGKYREAADAYQVVVQ 548

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           ++ D+    +A   L  +   L   ++A ++V  I +R+P
Sbjct: 549 DHPDSPIIRDASLGLARSLEKLEYYEQAYQIVDFIDKRWP 588



 Score = 54.4 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 75/250 (30%), Gaps = 52/250 (20%)

Query: 49  DSVTDVRYQREVYEKAVLFLK------EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
             V     +  ++  A             +F +            P +    ++LL    
Sbjct: 432 PEVKGNMREEVLHNLAQASYNLYRDTLRDHFHEVVGALEAAINFKPDSEKVPQALLQLGL 491

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYV-------YYLVGMSYAQMIRDVPYDQRAT 155
                    +A++  +    +YP+  NV Y+       YY  G                 
Sbjct: 492 AHLRVDNIPEASAYFKILTDKYPQDLNVPYIDFYWGDYYYRKG---------------KY 536

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE--VEIGRYYLKR--GEYVA--- 208
           +        +V+ + +SP ++ A   +     +L   E   +I  +  KR    Y+    
Sbjct: 537 REAADAYQVVVQDHPDSPIIRDASLGLARSLEKLEYYEQAYQIVDFIDKRWPRFYIEDPE 596

Query: 209 -------AIPRFQLVLA------NY----SDAEHAEEAMARLVEAYVALALMDEAREVVS 251
                     R Q          NY      A   +  +AR+ + Y+     + AR++  
Sbjct: 597 FLRLSGELANRLQKFGEAKDDLWNYYNMQPAATGNDVILARIGDIYLRAGQRNAARDIYR 656

Query: 252 LIQERYPQGY 261
            +  RYP+  
Sbjct: 657 TVAARYPEDE 666



 Score = 42.0 bits (98), Expect = 0.088,   Method: Composition-based stats.
 Identities = 22/166 (13%), Positives = 54/166 (32%), Gaps = 19/166 (11%)

Query: 104 QYSAGKYQQAASLGEEYITQYPESK-NV-DYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
            +   +Y++A  + ++ +   PE K N+ + V + +  +   + RD   D      ++  
Sbjct: 412 HFINSEYKEAIEVYKQ-LRANPEVKGNMREEVLHNLAQASYNLYRDTLRD--HFHEVVGA 468

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
           +   +    +S  V  A   + +                L+      A   F+++   Y 
Sbjct: 469 LEAAINFKPDSEKVPQALLQLGLAH--------------LRVDNIPEASAYFKILTDKYP 514

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
              +         + Y       EA +   ++ + +P     R   
Sbjct: 515 QDLNVPYIDFYWGDYYYRKGKYREAADAYQVVVQDHPDSPIIRDAS 560


>gi|325996655|gb|ADZ52060.1| competence lipoprotein [Helicobacter pylori 2018]
          Length = 220

 Score = 77.1 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 75/202 (37%), Gaps = 10/202 (4%)

Query: 18  QLYKFALTIFFSIAVCFLV-GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
           +L  F + +F ++A+  +  G   +  +    +           Y+  +  +   N   A
Sbjct: 2   RLKHFKIFLFIAMAMIVIGTGCANKKKKKDEYNKPAIFW-----YQGILREILFANLETA 56

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
             Y++    +   + +  +++L          +Y  A+   +EYI ++    NVDY+ +L
Sbjct: 57  DNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVDYLTFL 116

Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE- 195
              S+    ++   DQ      +  +   +E+Y NS Y     +     +  L   E+  
Sbjct: 117 KLQSHYYAFKNHSKDQEFISNAIVSLGEFIEKYPNSRYRPYVEYM--QIKFILGQNELNR 174

Query: 196 -IGRYYLKRGEYVAAIPRFQLV 216
            I   Y KR +        + +
Sbjct: 175 AIANVYKKRHKPEGVKRYLERI 196


>gi|78188052|ref|YP_378390.1| putative lipoprotein [Chlorobium chlorochromatii CaD3]
 gi|78170251|gb|ABB27347.1| putative lipoprotein [Chlorobium chlorochromatii CaD3]
          Length = 311

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 44/265 (16%), Positives = 77/265 (29%), Gaps = 46/265 (17%)

Query: 5   LGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKA 64
           L + + I      +       I   ++   L G           + V+D       Y +A
Sbjct: 7   LFKNLSILAMTFSRFIASVCLIALPVSALSLSGCSSSRQPTTASEQVSDG------YARA 60

Query: 65  VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
              +K+ ++  A               +    L       Y   +Y  AA +  +     
Sbjct: 61  EALIKKGDYRSAVLVLEPILFTSRATALEDDVLFRLGQAYYHTEQYLLAADMFTKVQQL- 119

Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT-------------- 170
           P S       ++V  SY +M      DQ  T+  ++  +   E Y               
Sbjct: 120 PASPYAATAQFMVASSYEKMSPPFELDQAYTQKAIEEFALYRELYPLTDSVRSAEQAAFW 179

Query: 171 -------------------------NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
                                     S  V+ A   +T  R +LA     +  +Y + G+
Sbjct: 180 KEMLKVDAANETYKKNYAQAMVGMSRSDSVRYAGKAITTLREKLAHNAYSVALHYQQLGK 239

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAM 230
             AA      V+A Y D  + + AM
Sbjct: 240 LKAATIFLDEVIARYPDTSYYKLAM 264


>gi|317010057|gb|ADU80637.1| hypothetical protein HPIN_07240 [Helicobacter pylori India7]
          Length = 220

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 73/201 (36%), Gaps = 10/201 (4%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           + +K  L I  +I V       ++  +D Y             Y+  +  +   N   A 
Sbjct: 4   KHFKTFLFITMAIIVIGTGCANKKKKKDEYNKPAIFW------YQGILREILFANLETAD 57

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
            Y++    +   + +  +++L          +Y  A+   +EYI ++    NVDY+ +L 
Sbjct: 58  NYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVDYLTFLK 117

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE-- 195
             S+    ++   DQ      +  +   +E+Y NS Y     +     +  L   E+   
Sbjct: 118 LQSHYYAFKNHSKDQEFISNAIVSLGEFIEKYPNSRYRPYVEYM--QIKFILGQNELNRA 175

Query: 196 IGRYYLKRGEYVAAIPRFQLV 216
           I   Y KR +        + +
Sbjct: 176 IANVYKKRHKPEGVKRYLERI 196


>gi|152993490|ref|YP_001359211.1| hypothetical protein SUN_1907 [Sulfurovum sp. NBC37-1]
 gi|151425351|dbj|BAF72854.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
          Length = 216

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/192 (20%), Positives = 71/192 (36%), Gaps = 10/192 (5%)

Query: 21  KFALTIFFSIAVCFL-VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
            F  ++   IAV FL VG  +        +           Y++    +   N  KA  Y
Sbjct: 2   NFKKSLLLGIAVAFLFVGCSKDDDDVAEFNKPALYW-----YQQIGNSIAAGNMDKADAY 56

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
           +     +   + + + +++M A       +Y  A    +EY  ++   KN +Y+ Y+   
Sbjct: 57  YISLKSEHMRSPLMQTAMMMLAVAHMDNEEYLLAGYYLDEYNKRFGGEKNREYIEYMKLK 116

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV--EIG 197
           +    I+DV  DQ+     +      + RY  S Y         + R  +A   +   I 
Sbjct: 117 AAFLGIKDVYKDQKLIMDSINGAGTYLLRYPGSTYTP--LVKTILVRLHMAQYLLNENIA 174

Query: 198 RYYLKRGEYVAA 209
             Y + G+  AA
Sbjct: 175 ALYERTGKPEAA 186


>gi|224438166|ref|ZP_03659101.1| hypothetical protein HcinC1_09310 [Helicobacter cinaedi CCUG 18818]
 gi|313144611|ref|ZP_07806804.1| competence lipoprotein [Helicobacter cinaedi CCUG 18818]
 gi|313129642|gb|EFR47259.1| competence lipoprotein [Helicobacter cinaedi CCUG 18818]
          Length = 213

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 67/187 (35%), Gaps = 12/187 (6%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           +    +    A     G  +   ++V  +           YE  +  +   N   A  YF
Sbjct: 2   RIYAFMCLLFANLIFFGCAK---KEVEYNKPASYW-----YESIIKEINFGNLEGADGYF 53

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
           +    +   + +  +++L+         +Y  AA   +EY+ +Y    N DYV YL  ++
Sbjct: 54  SSLQSEHINSPLVPEAMLILGEAHMEKDEYLLAAFYFDEYLKRYTSLANQDYVRYLKILT 113

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE--IGR 198
                ++   DQ      ++     ++ Y NS Y     +     + QL   E+   I  
Sbjct: 114 NFYGFKNYSKDQEFIAQSIKEAQNFLQSYPNSRYTPYVEY--IYIKFQLGQIELYKAIAN 171

Query: 199 YYLKRGE 205
            Y K+ +
Sbjct: 172 VYDKQDK 178


>gi|110639391|ref|YP_679600.1| TPR repeat-containing protein [Cytophaga hutchinsonii ATCC 33406]
 gi|110282072|gb|ABG60258.1| TPR repeat protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 265

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 79/213 (37%), Gaps = 2/213 (0%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
           +VC L+ + + S      + +      +E    A+ +    +  KA       +      
Sbjct: 4   SVCALIVFLQVSCGK--FNHLQKTGTPQEKLTAAIEYYNNGDNYKAGVLLEDITPILKGK 61

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
           G A  +L   A   Y   +Y  +A   +++   YP SK V+   Y+   S      +   
Sbjct: 62  GEAETALYYLANNYYKQKQYMMSAYYFKDFYLTYPRSKYVEETMYMNVYSLYLNSPEYNL 121

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
           DQ +T   L+ M+  + RY  + Y+      V     +L  K  E    Y K G Y +A+
Sbjct: 122 DQTSTYDCLKAMTTFLTRYPKTIYLDQCNAIVDELNAKLMHKAFEHSMMYHKVGNYKSAV 181

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
                 +  Y ++ + E+A      +   LA  
Sbjct: 182 VAIGNFVNEYPNSIYGEKAYFTRFTSQYHLAKN 214


>gi|119358468|ref|YP_913112.1| putative lipoprotein [Chlorobium phaeobacteroides DSM 266]
 gi|119355817|gb|ABL66688.1| putative lipoprotein [Chlorobium phaeobacteroides DSM 266]
          Length = 298

 Score = 76.3 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 80/240 (33%), Gaps = 39/240 (16%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E Y  A+    ++++  A             + +    L   A   ++  +Y  +A +  
Sbjct: 40  ERYAAALADYNKKDYDDAALTLEALMFSVRGSALEDDVLFYLAQSYFNTKQYLLSAEMYS 99

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT-------- 170
             +     S       + +  S+ ++     +D   TK  +Q  +  +E+Y         
Sbjct: 100 RLLQLNAGSPYTPTAQFQLAKSHEKLSSHYEFDHEHTKKAIQQYALYIEQYPGRDSAVVA 159

Query: 171 ---------------NSPYVKG----------------ARFYVTVGRNQLAAKEVEIGRY 199
                          N+ Y                   A+  +   R++LA  +V I   
Sbjct: 160 ADIQTYQELLKINPANANYQDQLAVLKLESERSGSLSYAKNAIKTFRDKLARNKVSIAHQ 219

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           Y++ G+   A+  +  V+  Y D  + E A    V+A +      EA + +    + YP+
Sbjct: 220 YIQLGKPKGAVIFYDEVIRFYPDTIYLEAAWKGKVDALILRKKWMEAGQALDQYLQLYPE 279


>gi|313674445|ref|YP_004052441.1| hypothetical protein [Marivirga tractuosa DSM 4126]
 gi|312941143|gb|ADR20333.1| Tetratricopeptide TPR_1 repeat-containing protein [Marivirga
           tractuosa DSM 4126]
          Length = 1022

 Score = 75.9 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 46/218 (21%), Positives = 83/218 (38%), Gaps = 24/218 (11%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
               + +   + +D  Y    Y  A  +  ++ F K+ +YF +  ++   A     +++ 
Sbjct: 486 SSYEKSMRNSNSSDGWYANLNYGLAHAYYNDKQFEKSLQYFKEYLKNGKSATYYEDAVIR 545

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
            A   Y    Y  A +  ++ I     + N DY Y+  G+  +             KL  
Sbjct: 546 LADCYYVTKNYSLAINYYQKAIDD--RNSNSDYAYFQKGVVNS--------IDGEIKLAN 595

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
           Q   ++++ Y+NS Y   A       + QLA           + G+Y  AI  F  +L N
Sbjct: 596 QSFDKVIKDYSNSNYYDNA----IFQKAQLA----------FESGQYETAINGFSNLLKN 641

Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
              +     A ++   AY  L   + A E  +LI + Y
Sbjct: 642 LPQSPLRPYAYSKRALAYFNLQQYENAEEDYTLILQNY 679



 Score = 53.6 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 76/202 (37%), Gaps = 15/202 (7%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            ++K V+   +     A + F++  +D+  +     ++   A + + +G+Y+ A +    
Sbjct: 578 YFQKGVVNSIDGEIKLANQSFDKVIKDYSNSNYYDNAIFQKAQLAFESGQYETAINGFSN 637

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT---------KLMLQYMSRIVERYT 170
            +   P+S    Y Y    ++Y  + +    ++  T               ++ + E Y+
Sbjct: 638 LLKNLPQSPLRPYAYSKRALAYFNLQQYENAEEDYTLILQNYLTHSTANGALAGLQELYS 697

Query: 171 NSPYVKGARFYVTVGRN------QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
                     Y+   +N      ++   E +  +      +Y  AI  F+  + NY D  
Sbjct: 698 IMDKEGDLEQYLIAYKNANPNDGEVTKIEFDAAQSLYFNQKYDRAISSFKAYIDNYPDHS 757

Query: 225 HAEEAMARLVEAYVALALMDEA 246
              +A   L ++Y     ++EA
Sbjct: 758 LTADARYYLADSYYRNDQLNEA 779



 Score = 39.7 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 68/209 (32%), Gaps = 27/209 (12%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGV-ARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           A ++ +   + K  +Y          + + A+   L+ A   +   K+ +A    +EY +
Sbjct: 216 ANIYYQRGQYQKLIDYAEDLLPR--LSRLEAQNVKLLIADAYFEQNKFSEANEYFQEYRS 273

Query: 123 ----------QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI------- 165
                      Y     + YV Y   M        +  +    K  L   +         
Sbjct: 274 GNKGKLDRELLY----RMGYVAYQ--MKDYDEAIKLFEEVGIAKDSLSQYNAYYLGGLYL 327

Query: 166 -VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
             E Y  S         +   ++       ++ +  LK+G    A+      +  + ++ 
Sbjct: 328 RQENYRYSSNAYEQAKLLNYNQDIAEESHFQLAKLNLKQGNTANAVAELSSFIEKHPNSS 387

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLI 253
           +  +A   L EAY+     ++A E +  I
Sbjct: 388 YLTQANELLSEAYLNSNAYEQAIEFLESI 416



 Score = 38.9 bits (90), Expect = 0.81,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 38/92 (41%), Gaps = 10/92 (10%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV-ARKSL----LMSAFVQYSAGKYQ 111
             ++Y+  V + +++ ++ A   F +         + A  +     L+S ++ +S G+ +
Sbjct: 29  ADDIYQDGVEYFEQKQYTAAQNKFEEYQNHKNNERLKAENAEYYSALISIYLYHSDGEKR 88

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
                 + ++  +P        Y+ +G  Y +
Sbjct: 89  -----VKSFVEFHPTHPKASEAYFELGNFYFR 115



 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 73/218 (33%), Gaps = 53/218 (24%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQC----SRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           +Y    +  + +++ +A + F +          +             +      Y+ +++
Sbjct: 284 LYRMGYVAYQMKDYDEAIKLFEEVGIAKDSLSQYNAY------YLGGLYLRQENYRYSSN 337

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
             E+       ++++         S+ Q+ + +   Q  T   +  +S  +E++ NS Y+
Sbjct: 338 AYEQAKLLN-YNQDIAE------ESHFQLAK-LNLKQGNTANAVAELSSFIEKHPNSSYL 389

Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV-------------LANYSD 222
             A   ++                YL    Y  AI   + +             +  Y  
Sbjct: 390 TQANELLSEA--------------YLNSNAYEQAIEFLESINNKSIKLKEAYQKVTFYQG 435

Query: 223 AEHAEEAMARLVEAYVALALMDEAREV---VSLIQERY 257
           AE+  +A       Y A+ L  ++ +     SL+ E Y
Sbjct: 436 AEYFNQANY-----YRAMQLFKKSVDYPQNKSLLGETY 468



 Score = 35.1 bits (80), Expect = 9.6,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 64/211 (30%), Gaps = 22/211 (10%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
            T  +     +E    + +E+N++K+ +Y+ +   D              A+  +S   +
Sbjct: 97  PTHPKASEAYFELGNFYFREKNYAKSIQYYEKTDDDKLRGEDKTHFQFKLAYAYFSRRAF 156

Query: 111 QQAASLGEEYIT---QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +A            QY  + N     Y  G  Y +            +       ++  
Sbjct: 157 DEALPYFNRLKRRDNQYQSASN-----YYAGYIYFEQKDFDEALIDLERAAENDTYKVST 211

Query: 168 -------RYTNSPYVKGARFYVTVGRNQLAAKE-----VEIGRYYLKRGEYVAAIPRFQL 215
                   Y    Y +    Y      +L+  E     + I   Y ++ ++  A   FQ 
Sbjct: 212 ANMMANIYYQRGQY-QKLIDYAEDLLPRLSRLEAQNVKLLIADAYFEQNKFSEANEYFQE 270

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEA 246
             +     +   E + R+      +   DEA
Sbjct: 271 YRSGNKG-KLDRELLYRMGYVAYQMKDYDEA 300


>gi|77163685|ref|YP_342210.1| TPR repeat-containing protein [Nitrosococcus oceani ATCC 19707]
 gi|254435696|ref|ZP_05049203.1| tol-pal system protein YbgF, putative [Nitrosococcus oceani AFC27]
 gi|76881999|gb|ABA56680.1| TPR repeat protein [Nitrosococcus oceani ATCC 19707]
 gi|207088807|gb|EDZ66079.1| tol-pal system protein YbgF, putative [Nitrosococcus oceani AFC27]
          Length = 257

 Score = 75.9 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 50/134 (37%), Gaps = 8/134 (5%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
           V    + Y+ A+  LKE  + +A   F+Q  + +P +     +       +Y  G +  A
Sbjct: 128 VDSGEQTYQAALELLKEGRYEEAIAAFDQFPQQYPDSRYRPNAQYWLGEARYMLGDFNAA 187

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
           A   +  + QYPES  V       G++Y ++ +         +        ++ RY  S 
Sbjct: 188 ADTFQALVEQYPESAKVPDAMLKQGLAYYELAQ--------WEQAKAQFQAVMTRYPAST 239

Query: 174 YVKGARFYVTVGRN 187
             + A       + 
Sbjct: 240 ASRLAEERFEKMKR 253



 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 47/113 (41%), Gaps = 14/113 (12%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           +  +    +  ++Y +S Y   A++++   R  L              G++ AA   FQ 
Sbjct: 148 EEAIAAFDQFPQQYPDSRYRPNAQYWLGEARYML--------------GDFNAAADTFQA 193

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           ++  Y ++    +AM +   AY  LA  ++A+     +  RYP    +R  E 
Sbjct: 194 LVEQYPESAKVPDAMLKQGLAYYELAQWEQAKAQFQAVMTRYPASTASRLAEE 246



 Score = 62.1 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 52/146 (35%), Gaps = 26/146 (17%)

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
                ++ L         G+Y++A +  +++  QYP+S+      Y +G +   +     
Sbjct: 131 GEQTYQAALELL----KEGRYEEAIAAFDQFPQQYPDSRYRPNAQYWLGEARYML----- 181

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
                          +VE+Y  S  V  A     + +  LA  E+          ++  A
Sbjct: 182 ---GDFNAAADTFQALVEQYPESAKVPDA-----MLKQGLAYYELA---------QWEQA 224

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVE 235
             +FQ V+  Y  +  +  A  R  +
Sbjct: 225 KAQFQAVMTRYPASTASRLAEERFEK 250



 Score = 46.3 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 2/71 (2%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           LK G Y  AI  F      Y D+ +   A   L EA   L   + A +    + E+YP+ 
Sbjct: 142 LKEGRYEEAIAAFDQFPQQYPDSRYRPNAQYWLGEARYMLGDFNAAADTFQALVEQYPES 201

Query: 261 YWARYVETLVK 271
             A+  + ++K
Sbjct: 202 --AKVPDAMLK 210


>gi|303247252|ref|ZP_07333526.1| tol-pal system protein YbgF [Desulfovibrio fructosovorans JJ]
 gi|302491411|gb|EFL51299.1| tol-pal system protein YbgF [Desulfovibrio fructosovorans JJ]
          Length = 341

 Score = 75.9 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 50/127 (39%), Gaps = 8/127 (6%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
               VY K +     + + +A   F + +R+F  + +   +L  +    +  G +  AA 
Sbjct: 221 PADAVYAKGLSSFNARQYQQALGIFQEFARNFKTSSLMPNALFWTGECYFQLGDFANAAL 280

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
             +E I +YP+S       +  G+++ ++                    ++++Y +S + 
Sbjct: 281 AYQEVIEKYPKSPKHADALFKRGVAFMKL--------GNAGAAKLSFKEVIDKYPDSAFA 332

Query: 176 KGARFYV 182
             A+  +
Sbjct: 333 TRAKSMM 339



 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 47/142 (33%), Gaps = 22/142 (15%)

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           N     Y  G+S            R  +  L         +  S  +  A F+       
Sbjct: 220 NPADAVYAKGLSSFNA--------RQYQQALGIFQEFARNFKTSSLMPNALFWTGEC--- 268

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
                      Y + G++  A   +Q V+  Y  +    +A+ +   A++ L     A+ 
Sbjct: 269 -----------YFQLGDFANAALAYQEVIEKYPKSPKHADALFKRGVAFMKLGNAGAAKL 317

Query: 249 VVSLIQERYPQGYWARYVETLV 270
               + ++YP   +A   ++++
Sbjct: 318 SFKEVIDKYPDSAFATRAKSMM 339


>gi|297380560|gb|ADI35447.1| competence lipoprotein (comL) [Helicobacter pylori v225d]
          Length = 220

 Score = 75.5 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 73/201 (36%), Gaps = 10/201 (4%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           + +K  L I  +I V       ++  +D Y             Y+  +  +   N   A 
Sbjct: 4   KHFKTFLFITMAIIVIGTGCTNKKKKKDEYNKPAIFW------YQGILREILFANLETAD 57

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
            Y++    +   + +  +++L          +Y  A+   +EYI ++    NVDY+ +L 
Sbjct: 58  NYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVDYLTFLK 117

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE-- 195
             S+    ++   DQ      +  +   +E+Y NS Y     +     +  L   E+   
Sbjct: 118 LQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYM--QIKFILGQNELNRA 175

Query: 196 IGRYYLKRGEYVAAIPRFQLV 216
           I   Y KR +        + +
Sbjct: 176 IANVYKKRHKPEGVKRYLERI 196


>gi|300112860|ref|YP_003759435.1| tol-pal system protein YbgF [Nitrosococcus watsonii C-113]
 gi|299538797|gb|ADJ27114.1| tol-pal system protein YbgF [Nitrosococcus watsonii C-113]
          Length = 255

 Score = 75.5 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 51/134 (38%), Gaps = 8/134 (5%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
           V    + Y+ A+  LKE ++ +A   F+Q  + +P +     +       +Y  G +  A
Sbjct: 126 VDSGEQAYQVALGLLKEGHYEEAIAAFDQFLQQYPDSRYRPNAQYWLGEARYMLGDFNDA 185

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
               +  + QYPES  V       G++Y ++ +         +        ++ RY  S 
Sbjct: 186 VGTFQALVEQYPESAKVPDAMLKQGLAYYELAQ--------WEQAKAQFQAVMTRYPAST 237

Query: 174 YVKGARFYVTVGRN 187
             + A   +   + 
Sbjct: 238 ASRLAEERLEKMKR 251



 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 52/133 (39%), Gaps = 25/133 (18%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
             G Y++A +  ++++ QYP+S+      Y +G +   +              +     +
Sbjct: 141 KEGHYEEAIAAFDQFLQQYPDSRYRPNAQYWLGEARYML--------GDFNDAVGTFQAL 192

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           VE+Y  S  V  A     + +  LA  E+          ++  A  +FQ V+  Y  +  
Sbjct: 193 VEQYPESAKVPDA-----MLKQGLAYYELA---------QWEQAKAQFQAVMTRYPASTA 238

Query: 226 ---AEEAMARLVE 235
              AEE + ++  
Sbjct: 239 SRLAEERLEKMKR 251



 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 50/119 (42%), Gaps = 14/119 (11%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              +  +    + +++Y +S Y   A++++   R  L              G++  A+  
Sbjct: 143 GHYEEAIAAFDQFLQQYPDSRYRPNAQYWLGEARYML--------------GDFNDAVGT 188

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           FQ ++  Y ++    +AM +   AY  LA  ++A+     +  RYP    +R  E  ++
Sbjct: 189 FQALVEQYPESAKVPDAMLKQGLAYYELAQWEQAKAQFQAVMTRYPASTASRLAEERLE 247



 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 2/81 (2%)

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
            +  ++    LK G Y  AI  F   L  Y D+ +   A   L EA   L   ++A    
Sbjct: 130 EQAYQVALGLLKEGHYEEAIAAFDQFLQQYPDSRYRPNAQYWLGEARYMLGDFNDAVGTF 189

Query: 251 SLIQERYPQGYWARYVETLVK 271
             + E+YP+   A+  + ++K
Sbjct: 190 QALVEQYPES--AKVPDAMLK 208


>gi|294507597|ref|YP_003571655.1| hypothetical protein SRM_01782 [Salinibacter ruber M8]
 gi|294343925|emb|CBH24703.1| putative TPR-repeat protein [Salinibacter ruber M8]
          Length = 1064

 Score = 75.5 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 72/242 (29%), Gaps = 31/242 (12%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D V     +  +Y+             A +   +   DFP + +   +L     + +   
Sbjct: 637 DRVDGAGVEYALYQGGRALYYAGQPGAARDRLRRFVDDFPDSPLRPDALYRLGDIHFQEQ 696

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +Y+ A     + +  +PE+       Y +G ++              K  +Q    ++E 
Sbjct: 697 RYEAARDAFTQLLDDHPETARAAEAQYAIGDTHYNA--------GEMKDAVQAYRAVLET 748

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKE-----------------------VEIGRYYLKRGE 205
           Y   P    A   +    N    ++                           R   +RG+
Sbjct: 749 YPERPSASEAASSLFFALNAAGQQDRADKLIAAIANRVPDANMEDRLRYHRARAAYQRGD 808

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
              A+  F+  +   S      +A   L   Y      +EA+  +  + ++YP   +   
Sbjct: 809 SKRALRLFRTFVRTTSTEARVPDAYYYLGLLYADTDQYEEAKNYLRQLTDQYPDSEYLSD 868

Query: 266 VE 267
             
Sbjct: 869 AS 870



 Score = 75.2 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 88/256 (34%), Gaps = 35/256 (13%)

Query: 30  IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
           +A   L       +  +   +  +    +  ++KA    +   + +A   F   +   P 
Sbjct: 470 LATDNLDSALDAYTEAIDRGAAPESVTAKVRFQKAWSLYRNGRYGEAGTEFQALADAHPE 529

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
               +++L       Y   +Y  A    + Y+   P++       Y +  +Y +      
Sbjct: 530 TARGQEALFWGGDTFYQREQYGAARRQFQAYLDTSPDAPQRAGARYALAWTYFK------ 583

Query: 150 YDQRATKLMLQYMSRIVERY-----TNSPYVKGARFYVTVGRNQL--------------- 189
             QR  +   +   R ++ Y     ++ PY + AR  +      L               
Sbjct: 584 --QRRFEPAARSFRRFLDVYDRDSMSDVPYRQDARLRLADCYFALKRYDDARAAYDRVDG 641

Query: 190 AAKEVEI-----GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
           A  E  +       YY   G+  AA  R +  + ++ D+    +A+ RL + +      +
Sbjct: 642 AGVEYALYQGGRALYYA--GQPGAARDRLRRFVDDFPDSPLRPDALYRLGDIHFQEQRYE 699

Query: 245 EAREVVSLIQERYPQG 260
            AR+  + + + +P+ 
Sbjct: 700 AARDAFTQLLDDHPET 715



 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 78/236 (33%), Gaps = 34/236 (14%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
            + V   + +Y +A   L + + +      ++  R++P    AR + L  A      G  
Sbjct: 123 ASHVAAPQALYLEARAALAQGDDAGTRRLLSRLQREYPSHPRARTARLGLAQYYLDQGNP 182

Query: 111 QQAASLGEEYITQYPESKN-VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            +A S  +  I   P   +      YL+G            +Q      L Y  ++  RY
Sbjct: 183 DRAKSQLQ-TIATAPSRPDEGARALYLLG--------RTEQNQGNPNAALPYFKQVYSRY 233

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRY-----------------------YLKRGEY 206
            N+     A +   V + +L   +     +                       Y + G+Y
Sbjct: 234 PNAELAPAALYARGVTQVRLERYDRATASFERLGEQFPDSPFSENLGTILGEVYYRVGQY 293

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
             A    Q  L + + +  A   +  L E Y AL   ++A     LI E  P   +
Sbjct: 294 ENAATELQRRLPDLTGSTRA-RTLFLLGETYSALGRREDATTQYRLILEELPNSSY 348



 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 73/239 (30%), Gaps = 45/239 (18%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G  R   R    D          +Y    +  +EQ +  A + F Q   D P    A ++
Sbjct: 662 GAARDRLRRFVDDFPDSPLRPDALYRLGDIHFQEQRYEAARDAFTQLLDDHPETARAAEA 721

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV-----------------DYVYYLVGM 139
                   Y+AG+ + A       +  YPE  +                  D    L+  
Sbjct: 722 QYAIGDTHYNAGEMKDAVQAYRAVLETYPERPSASEAASSLFFALNAAGQQDRADKLIA- 780

Query: 140 SYAQMIRDVP-------------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
           + A  + D               Y +  +K  L+     V   +    V  A +Y+ +  
Sbjct: 781 AIANRVPDANMEDRLRYHRARAAYQRGDSKRALRLFRTFVRTTSTEARVPDAYYYLGLL- 839

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
                        Y    +Y  A    + +   Y D+E+  +A  RL E Y+     ++
Sbjct: 840 -------------YADTDQYEEAKNYLRQLTDQYPDSEYLSDASLRLGEIYLEEGANEQ 885



 Score = 37.8 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 57/183 (31%), Gaps = 22/183 (12%)

Query: 47   YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
              D   D    +  Y ++   L+    S A    +Q     P   +   + L    V+  
Sbjct: 895  EQDDTRDELRAQARYGQSQALLQLGRTSAADTLLSQILEAEPQGPLRNAARLGLGRVREE 954

Query: 107  AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
             G+  +A  L    I    + +      Y +G    + +R     Q   +  ++ + R+ 
Sbjct: 955  QGRTDEALDLYRRVIRA-SDGETGAEALYRLG----RQLRR----QGNPQTAIRELERMP 1005

Query: 167  ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
              +   P    AR  +               R Y  RGE   A+  +  V   Y     A
Sbjct: 1006 SLFAGHP-EWEARALLEQ------------ARAYRARGETGQAVQLYDEVQQAYGGTPFA 1052

Query: 227  EEA 229
            E A
Sbjct: 1053 ETA 1055


>gi|210135563|ref|YP_002302002.1| competence lipoprotein ComL [Helicobacter pylori P12]
 gi|210133531|gb|ACJ08522.1| competence lipoprotein ComL [Helicobacter pylori P12]
 gi|317179821|dbj|BAJ57607.1| competence lipoprotein [Helicobacter pylori F32]
          Length = 220

 Score = 75.5 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 73/201 (36%), Gaps = 10/201 (4%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           + +K  L I  +I V       ++  +D Y             Y+  +  +   N   A 
Sbjct: 4   KHFKTFLFITMAIIVIGTGCANKKKKKDEYNKPAIFW------YQGILREILFANLETAD 57

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
            Y++    +   + +  +++L          +Y  A+   +EYI ++    NVDY+ +L 
Sbjct: 58  NYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVDYLTFLK 117

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE-- 195
             S+    ++   DQ      +  +   +E+Y NS Y     +     +  L   E+   
Sbjct: 118 LQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYM--QIKFILGQNELNRA 175

Query: 196 IGRYYLKRGEYVAAIPRFQLV 216
           I   Y KR +        + +
Sbjct: 176 IANVYKKRHKPEGVKRYLERI 196


>gi|154148931|ref|YP_001406138.1| competence lipoprotein [Campylobacter hominis ATCC BAA-381]
 gi|153804940|gb|ABS51947.1| competence lipoprotein [Campylobacter hominis ATCC BAA-381]
          Length = 212

 Score = 75.5 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 70/189 (37%), Gaps = 13/189 (6%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + KF   + F++ +  + G   +   ++Y          +  +   +  +K+ N   A E
Sbjct: 1   MKKF---LIFAVFIAIISGCSAKKGDEIYN------LAPQAWFNLIIKDIKDSNLKAADE 51

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
           ++   S +   + +     L+ A        Y  A +  +EYI +Y     + Y  +L  
Sbjct: 52  HYVSFSSEHIGSPLLESMTLILAQAHTMEEDYTLANTYLDEYIRRYGTDDKIQYAKFLKI 111

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE--I 196
            S          +Q+  ++ +  +   + +Y ++ Y       +   + +LA  E+   I
Sbjct: 112 KSNFDSFNKPNRNQKLVQISIVEIQNFLMQYPDTKYKPLLETML--IKFRLAENELNKSI 169

Query: 197 GRYYLKRGE 205
              Y K G 
Sbjct: 170 KNLYEKTGR 178


>gi|145588461|ref|YP_001155058.1| TPR repeat-containing protein [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145046867|gb|ABP33494.1| Tetratricopeptide TPR_2 repeat protein [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
          Length = 243

 Score = 75.5 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 54/137 (39%), Gaps = 8/137 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S T    +++ Y+ A+   +  N  KA E F+  +  +P +     +L  S   +Y+   
Sbjct: 115 SGTVQPGEKKAYDDALKAFQAGNLKKADEGFSAFAAKYPKSPYLPLALYWSGNSKYANKD 174

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y  A S  +  I +YP    +     +V +  +Q+               +  S I+ +Y
Sbjct: 175 YAGAISQLQSLIKRYPNHPRIPAA--MVTLGNSQLESG------NKAAAKKTFSEIIAKY 226

Query: 170 TNSPYVKGARFYVTVGR 186
            ++   K A+  +   +
Sbjct: 227 PDTDAAKDAQQLMAATK 243



 Score = 51.7 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 41/118 (34%), Gaps = 14/118 (11%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K   +  S    +Y  SPY+  A ++    +                  +Y  AI +
Sbjct: 136 GNLKKADEGFSAFAAKYPKSPYLPLALYWSGNSK--------------YANKDYAGAISQ 181

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
            Q ++  Y +      AM  L  + +       A++  S I  +YP    A+  + L+
Sbjct: 182 LQSLIKRYPNHPRIPAAMVTLGNSQLESGNKAAAKKTFSEIIAKYPDTDAAKDAQQLM 239


>gi|329904213|ref|ZP_08273696.1| TPR repeat containing exported protein [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327548109|gb|EGF32830.1| TPR repeat containing exported protein [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 256

 Score = 75.2 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 52/141 (36%), Gaps = 8/141 (5%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
           V     +    +++ YE A+   K  ++  +   F    R +P +G A  +        Y
Sbjct: 121 VDGKETSVEPAEQKTYEAALALFKAGDYKTSGAAFTDFMRRYPQSGFAPSAQYFLGTTYY 180

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
           +   Y+ A +  +  +  YPE+         +   YA++               + +  +
Sbjct: 181 AQRDYRNAITAQQVVVKNYPENPKAADALLNIASCYAELKDRP--------AAKKSLETL 232

Query: 166 VERYTNSPYVKGARFYVTVGR 186
           V +Y +SP  + A+  +   R
Sbjct: 233 VAQYPSSPAAQTAKERLAALR 253



 Score = 69.8 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 53/142 (37%), Gaps = 22/142 (15%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           A +    +A   + AG Y+ + +   +++ +YP+S       Y +G +Y          Q
Sbjct: 131 AEQKTYEAALALFKAGDYKTSGAAFTDFMRRYPQSGFAPSAQYFLGTTYYA--------Q 182

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           R  +  +     +V+ Y  +P    A               + I   Y +  +  AA   
Sbjct: 183 RDYRNAITAQQVVVKNYPENPKAADAL--------------LNIASCYAELKDRPAAKKS 228

Query: 213 FQLVLANYSDAEHAEEAMARLV 234
            + ++A Y  +  A+ A  RL 
Sbjct: 229 LETLVAQYPSSPAAQTAKERLA 250



 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 38/102 (37%), Gaps = 14/102 (13%)

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
              +  + RY  S +   A+                +G  Y  + +Y  AI   Q+V+ N
Sbjct: 153 AAFTDFMRRYPQSGFAPSAQ--------------YFLGTTYYAQRDYRNAITAQQVVVKN 198

Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           Y +   A +A+  +   Y  L     A++ +  +  +YP   
Sbjct: 199 YPENPKAADALLNIASCYAELKDRPAAKKSLETLVAQYPSSP 240



 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 22/66 (33%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            K G+Y  +   F   +  Y  +  A  A   L   Y A      A     ++ + YP+ 
Sbjct: 143 FKAGDYKTSGAAFTDFMRRYPQSGFAPSAQYFLGTTYYAQRDYRNAITAQQVVVKNYPEN 202

Query: 261 YWARYV 266
             A   
Sbjct: 203 PKAADA 208


>gi|15645988|ref|NP_208169.1| competence lipoprotein (comL) [Helicobacter pylori 26695]
 gi|108563749|ref|YP_628065.1| competence lipoprotein [Helicobacter pylori HPAG1]
 gi|188528168|ref|YP_001910855.1| competence lipoprotein [Helicobacter pylori Shi470]
 gi|217034451|ref|ZP_03439864.1| hypothetical protein HP9810_11g33 [Helicobacter pylori 98-10]
 gi|254779917|ref|YP_003058023.1| hypothetical protein HELPY_1365 [Helicobacter pylori B38]
 gi|308183491|ref|YP_003927618.1| hypothetical protein HPPC_06800 [Helicobacter pylori PeCan4]
 gi|2314548|gb|AAD08420.1| competence lipoprotein (comL) [Helicobacter pylori 26695]
 gi|107837522|gb|ABF85391.1| competence lipoprotein [Helicobacter pylori HPAG1]
 gi|188144408|gb|ACD48825.1| competence lipoprotein [Helicobacter pylori Shi470]
 gi|216943121|gb|EEC22595.1| hypothetical protein HP9810_11g33 [Helicobacter pylori 98-10]
 gi|254001829|emb|CAX30072.1| Conserved hypothetical protein [Helicobacter pylori B38]
 gi|261837482|gb|ACX97248.1| competence lipoprotein [Helicobacter pylori 51]
 gi|261838898|gb|ACX98663.1| competence lipoprotein (comL) [Helicobacter pylori 52]
 gi|308064154|gb|ADO06041.1| hypothetical protein HPSAT_06685 [Helicobacter pylori Sat464]
 gi|308065676|gb|ADO07568.1| hypothetical protein HPPC_06800 [Helicobacter pylori PeCan4]
 gi|315586018|gb|ADU40399.1| competence lipoprotein [Helicobacter pylori 35A]
 gi|317013165|gb|ADU83773.1| hypothetical protein HPLT_06915 [Helicobacter pylori Lithuania75]
 gi|317176833|dbj|BAJ54622.1| competence lipoprotein [Helicobacter pylori F16]
 gi|317178334|dbj|BAJ56122.1| competence lipoprotein [Helicobacter pylori F30]
 gi|317181315|dbj|BAJ59099.1| competence lipoprotein [Helicobacter pylori F57]
 gi|332672817|gb|AEE69634.1| competence lipoprotein [Helicobacter pylori 83]
          Length = 220

 Score = 75.2 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 73/201 (36%), Gaps = 10/201 (4%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           + +K  L I  +I V       ++  +D Y             Y+  +  +   N   A 
Sbjct: 4   KHFKTFLFITMAIIVIGTGCANKKKKKDEYNKPAIFW------YQGILREILFANLETAD 57

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
            Y++    +   + +  +++L          +Y  A+   +EYI ++    NVDY+ +L 
Sbjct: 58  NYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVDYLTFLK 117

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE-- 195
             S+    ++   DQ      +  +   +E+Y NS Y     +     +  L   E+   
Sbjct: 118 LQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYM--QIKFILGQNELNRA 175

Query: 196 IGRYYLKRGEYVAAIPRFQLV 216
           I   Y KR +        + +
Sbjct: 176 IANVYKKRHKPEGVKRYLERI 196


>gi|255034845|ref|YP_003085466.1| TPR repeat-containing protein [Dyadobacter fermentans DSM 18053]
 gi|254947601|gb|ACT92301.1| TPR repeat-containing protein [Dyadobacter fermentans DSM 18053]
          Length = 1019

 Score = 75.2 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 83/205 (40%), Gaps = 38/205 (18%)

Query: 64  AVLFLKEQNFSKAYEYFN------QCSRDFPFAGVARKSLLMSAFVQ-YSAGKYQQAASL 116
           A  +L  +N+++A   +       +  +D+        +L   A    Y   +  +A   
Sbjct: 573 ADCYLAAKNYNEAIRTYEQVAAKGKVDKDY--------ALFQKARAYVYMNRE-AEAKRQ 623

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            E  I+QYP+SK++D  Y+ +         D+ +  ++    ++  +R++     S  + 
Sbjct: 624 FELLISQYPQSKHLDNAYFQLA--------DIDFQNQSYSAAVKGFTRMINEKPKSTLIP 675

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
            A                   + Y     Y  AI  F+ +L  YSD+  AE A+  + E+
Sbjct: 676 AALLRR--------------AQSYYNLQVYEQAIVDFRKILTEYSDSPSAESALEGIQES 721

Query: 237 YVALALMDEAREVVSLIQERYPQGY 261
           Y A+   +E  +V+ ++++  P   
Sbjct: 722 YSAVGRPEEFNQVLGVVRKNNPGNE 746



 Score = 72.5 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 84/253 (33%), Gaps = 34/253 (13%)

Query: 30  IAVCFLVGWERQSSRDVYLDSVTDVRYQRE--VYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
           +A C+L       +   Y       +  ++  +++KA  ++     ++A   F      +
Sbjct: 572 LADCYLAAKNYNEAIRTYEQVAAKGKVDKDYALFQKARAYVYMNREAEAKRQFELLISQY 631

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
           P +     +    A + +    Y  A       I + P+S  +         SY  +   
Sbjct: 632 PQSKHLDNAYFQLADIDFQNQSYSAAVKGFTRMINEKPKSTLIPAALLRRAQSYYNL--- 688

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV----------------------- 184
                +  +  +    +I+  Y++SP  + A   +                         
Sbjct: 689 -----QVYEQAIVDFRKILTEYSDSPSAESALEGIQESYSAVGRPEEFNQVLGVVRKNNP 743

Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
           G  +L   E +  R      +Y  AI   Q  L +Y  ++H  +A   +  +Y     ++
Sbjct: 744 GNEKLEGVEFDNVRNLYYAEKYENAITSLQEFLKSYPASKHQYDATYFIASSYDKTNRVN 803

Query: 245 EA-REVVSLIQER 256
           EA +    ++Q+ 
Sbjct: 804 EALQYYSKVVQQN 816



 Score = 42.8 bits (100), Expect = 0.045,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 72/211 (34%), Gaps = 35/211 (16%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A ++ ++ +++ A + + +  R  P   +     L     Q+    ++ A +  +     
Sbjct: 277 AEVYYEKGDYANAVKAYERYKRMRP-GAIPPTVALHYGHAQFRNNNFEGAITSLK----- 330

Query: 124 YPESKNVD----YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            P     D    Y  Y++G+S  +                   + +V+    + Y   A+
Sbjct: 331 -PIGNGKDSVSQYASYILGISNLKTNSLTNALTSFGNAASLDFNPVVKE--EAAY-NHAK 386

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             + +G N  A KE+           Y+A           Y +++H EEA   + E Y  
Sbjct: 387 VQLELGNNADAVKELN---------NYMA----------KYPESKHTEEATELVAEGYAN 427

Query: 240 LALMDEAREVVSLIQERY--PQGYWARYVET 268
            +    A + +  ++ R       + R    
Sbjct: 428 ASNSSAAIKYIEALKTRNAKINSTYQRLTYN 458



 Score = 38.6 bits (89), Expect = 0.94,   Method: Composition-based stats.
 Identities = 37/165 (22%), Positives = 63/165 (38%), Gaps = 23/165 (13%)

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
                ++ P           +    Y A KY+ A +  +E++  YP SK+     Y +  
Sbjct: 735 LGVVRKNNPGNEKLEGVEFDNVRNLYYAEKYENAITSLQEFLKSYPASKHQYDATYFIAS 794

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           SY +  R            LQY S++V++   S +V  A              E+EIG  
Sbjct: 795 SYDKTNR--------VNEALQYYSKVVQQN-RSQFVGAAAQRSA---------ELEIG-- 834

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
              RG +  A+  F+++  N  + +    A   L++ Y  L   D
Sbjct: 835 ---RGNFNNAVTNFRVLSRNAENKKDQATAWTGLMDTYFTLKSYD 876



 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 73/230 (31%), Gaps = 42/230 (18%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           +   Y  A + L+  N + A +  N     +P +    ++  + A    +A     A   
Sbjct: 378 EEAAYNHAKVQLELGNNADAVKELNNYMAKYPESKHTEEATELVAEGYANASNSSAAIKY 437

Query: 117 GE----EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT-- 170
            E                    Y   ++Y Q +  V ++    +  ++   + ++ +   
Sbjct: 438 IEALKTRNAKINST--------YQR-LTYNQGV--VDFNAGRFEQAIEMFDKSLK-HPID 485

Query: 171 ------------NSPYVKGARFYVTVGRNQL---------AAKEVEIGRY-YLKRGEYVA 208
                        S Y            NQ+         A K +    Y Y  + +Y  
Sbjct: 486 AELFNSASFYKAESVYGLKRVDEAATLYNQIAKNPKAGIYARKSLYALGYIYYNQKKYSQ 545

Query: 209 AIPRFQLVLANYSDAEH--AEEAMARLVEAYVALALMDEAREVVSLIQER 256
           A+P F+    N    E    E+A ARL + Y+A    +EA      +  +
Sbjct: 546 ALPYFRDFTNNIEGMEADMIEDAHARLADCYLAAKNYNEAIRTYEQVAAK 595



 Score = 35.9 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 63/213 (29%), Gaps = 38/213 (17%)

Query: 45  DVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-KSLLMSAF 102
           D ++ +  +    + +Y      + +  N+ KA  Y  +     P AG  R +S    A 
Sbjct: 113 DRFVKNHAEHPKAQLIYSDLGKYYYESGNYEKAITYLEKAVDL-PGAGAGRLESTYRLAM 171

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             ++  +   A  L  + +       N     +  G+   Q            +   Q  
Sbjct: 172 SYHNTKQPDLALPLFNQ-VKNEAGFDNAGDASFYAGVINYQK--------NNFEEAYQDF 222

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKE-----------------------VEIGRY 199
            R +E +    Y   A  ++     QL   +                       + +   
Sbjct: 223 KR-IEDHPY--YKNEAPNWIISSLYQLKKFDELLTYGERILGSQRGNTKLDDVALYVAEV 279

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
           Y ++G+Y  A+  ++        A     A+  
Sbjct: 280 YYEKGDYANAVKAYERYKRMRPGAIPPTVALHY 312


>gi|39995134|ref|NP_951085.1| TPR domain protein [Geobacter sulfurreducens PCA]
 gi|39981896|gb|AAR33358.1| TPR domain protein [Geobacter sulfurreducens PCA]
 gi|307634644|gb|ADI82887.2| TPR domain lipoprotein [Geobacter sulfurreducens KN400]
          Length = 278

 Score = 75.2 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 58/159 (36%), Gaps = 8/159 (5%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
            + A   +   +++ +        T+      +Y+K +   +  N+  A E F +     
Sbjct: 128 LAKAETGIEALQKKVAEQAPSPKETEKPTPEALYQKGLDAYRAGNYGVARESFTRFLEQH 187

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
           P   +A  +   +    YS  K++QA    +E I  YP  + V         +++++   
Sbjct: 188 PKHELAANARYWTGETYYSEKKFEQAILEFQEVIKNYPGKEKVPAAMLKQAAAFSEI--- 244

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
                   K     + ++ + Y +S   K A+  +   +
Sbjct: 245 -----GDAKSARFVLRKLADDYPSSEEAKRAKDRLKELK 278



 Score = 64.8 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 48/141 (34%), Gaps = 22/141 (15%)

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
               Y  G+   +             +  +  +R +E++        AR++         
Sbjct: 157 PEALYQKGLDAYRA--------GNYGVARESFTRFLEQHPKHELAANARYW--------- 199

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
                 G  Y    ++  AI  FQ V+ NY   E    AM +   A+  +     AR V+
Sbjct: 200 -----TGETYYSEKKFEQAILEFQEVIKNYPGKEKVPAAMLKQAAAFSEIGDAKSARFVL 254

Query: 251 SLIQERYPQGYWARYVETLVK 271
             + + YP    A+  +  +K
Sbjct: 255 RKLADDYPSSEEAKRAKDRLK 275


>gi|15612357|ref|NP_224010.1| hypothetical protein jhp1292 [Helicobacter pylori J99]
 gi|4155904|gb|AAD06874.1| putative [Helicobacter pylori J99]
          Length = 220

 Score = 75.2 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 73/201 (36%), Gaps = 10/201 (4%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           + +K  L I  ++ V       ++  +D Y             Y+  +  +   N   A 
Sbjct: 4   KHFKTFLFITMAVIVIGTGCANKKKKKDEYNKPAIFW------YQGILREILFANLETAD 57

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
            Y++    +   + +  +++L          +Y  A+   +EYI ++    NVDY+ +L 
Sbjct: 58  NYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVDYLTFLK 117

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE-- 195
             S+    ++   DQ      +  +   +E+Y NS Y     +     +  L   E+   
Sbjct: 118 LQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYM--QIKFILGQNELNRA 175

Query: 196 IGRYYLKRGEYVAAIPRFQLV 216
           I   Y KR +        + +
Sbjct: 176 IANVYKKRHKPEGVKRYLERI 196


>gi|223039677|ref|ZP_03609963.1| putative DNA repair protein RecN [Campylobacter rectus RM3267]
 gi|222879060|gb|EEF14155.1| putative DNA repair protein RecN [Campylobacter rectus RM3267]
          Length = 215

 Score = 75.2 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 76/195 (38%), Gaps = 11/195 (5%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
              L KF   +FF   VC + G   + +    L          + Y + +  +K ++   
Sbjct: 1   MKNLIKFLSAVFF---VCLVGGCADKYTELYNL-------TPEQWYSEIIGDIKNRDLES 50

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES-KNVDYVY 134
           A +++   S +   + +  + LL+ A    +  +Y  A    +EY+ +Y ++    ++  
Sbjct: 51  ADKHYTAMSSEHVASPLLEQILLILAQAHANDEEYLMANFYLDEYLKRYGDNGLRSEFAQ 110

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
           YL   +          +Q+  +  +  + + +  Y N+ Y       +   +  + + +V
Sbjct: 111 YLKIKANFDSFSQPNRNQKLMQDSIAEIEKFLYIYPNTQYRPLIETMLIKFKLAIYSMDV 170

Query: 195 EIGRYYLKRGEYVAA 209
           +I   Y + G   +A
Sbjct: 171 QIADLYERTGRSESA 185


>gi|167837696|ref|ZP_02464579.1| hypothetical protein Bpse38_14500 [Burkholderia thailandensis
           MSMB43]
          Length = 249

 Score = 75.2 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 18/137 (13%), Positives = 45/137 (32%), Gaps = 8/137 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
             T    + + +  A    +  NF  A   F      +P +     +       QY+   
Sbjct: 121 EGTVQPGETDAFNAASQQFRNGNFKGAAASFRAFIAKYPQSPYQPTAQYWLGNAQYALRD 180

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y+ + +  +  +  YP+          +G +  +        Q+A     +   ++V ++
Sbjct: 181 YKGSTATWQGIVKNYPQHPRAADALIAIGTNQFEQ------GQKAA--AKKTFEQVVSQF 232

Query: 170 TNSPYVKGARFYVTVGR 186
             S   + A+  +   +
Sbjct: 233 PGSNAAETAQSKLDAIK 249



 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 47/126 (37%), Gaps = 22/126 (17%)

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           Q+  G ++ AA+    +I +YP+S       Y +G +   +        R  K       
Sbjct: 138 QFRNGNFKGAAASFRAFIAKYPQSPYQPTAQYWLGNAQYAL--------RDYKGSTATWQ 189

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
            IV+ Y   P    A               + IG    ++G+  AA   F+ V++ +  +
Sbjct: 190 GIVKNYPQHPRAADAL--------------IAIGTNQFEQGQKAAAKKTFEQVVSQFPGS 235

Query: 224 EHAEEA 229
             AE A
Sbjct: 236 NAAETA 241



 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 15/109 (13%), Positives = 35/109 (32%), Gaps = 14/109 (12%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         + +Y  SPY   A++++       A   +          +Y  +   
Sbjct: 142 GNFKGAAASFRAFIAKYPQSPYQPTAQYWLGN-----AQYAL---------RDYKGSTAT 187

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +Q ++ NY     A +A+  +            A++    +  ++P   
Sbjct: 188 WQGIVKNYPQHPRAADALIAIGTNQFEQGQKAAAKKTFEQVVSQFPGSN 236



 Score = 39.3 bits (91), Expect = 0.64,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 22/59 (37%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            + G +  A   F+  +A Y  + +   A   L  A  AL     +      I + YPQ
Sbjct: 139 FRNGNFKGAAASFRAFIAKYPQSPYQPTAQYWLGNAQYALRDYKGSTATWQGIVKNYPQ 197


>gi|308062663|gb|ADO04551.1| hypothetical protein HPCU_07045 [Helicobacter pylori Cuz20]
          Length = 220

 Score = 74.8 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 73/201 (36%), Gaps = 10/201 (4%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           + +K  L I  +I V       ++  +D Y             Y+  +  +   N   A 
Sbjct: 4   KHFKTFLFITMAIIVIGTGCTNKKKKKDEYNKPAIFW------YQGILREILFANLETAD 57

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
            Y++    +   + +  +++L          +Y  A+   +EYI ++    NVDY+ +L 
Sbjct: 58  NYYSSLQSEHINSPLLPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVDYLTFLK 117

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE-- 195
             S+    ++   DQ      +  +   +E+Y NS Y     +     +  L   E+   
Sbjct: 118 LQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYM--QIKFILGQNELNRA 175

Query: 196 IGRYYLKRGEYVAAIPRFQLV 216
           I   Y KR +        + +
Sbjct: 176 IANVYKKRHKPEGVKRYLERI 196


>gi|308185160|ref|YP_003929293.1| hypothetical protein HPSJM_07080 [Helicobacter pylori SJM180]
 gi|308061080|gb|ADO02976.1| hypothetical protein HPSJM_07080 [Helicobacter pylori SJM180]
 gi|317014772|gb|ADU82208.1| putative lipoprotein [Helicobacter pylori Gambia94/24]
          Length = 220

 Score = 74.8 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 73/201 (36%), Gaps = 10/201 (4%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           + +K  L I  ++ V       ++  +D Y             Y+  +  +   N   A 
Sbjct: 4   KHFKTFLFIAMAVIVIGTGCANKKKKKDEYNKPAIFW------YQGILREILFANLETAD 57

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
            Y++    +   + +  +++L          +Y  A+   +EYI ++    NVDY+ +L 
Sbjct: 58  NYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVDYLTFLK 117

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE-- 195
             S+    ++   DQ      +  +   +E+Y NS Y     +     +  L   E+   
Sbjct: 118 LQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYM--QIKFILGQNELNRA 175

Query: 196 IGRYYLKRGEYVAAIPRFQLV 216
           I   Y KR +        + +
Sbjct: 176 IANVYKKRHKPEGVKRYLERI 196


>gi|83815162|ref|YP_445705.1| TPR repeat-containing protein [Salinibacter ruber DSM 13855]
 gi|83756556|gb|ABC44669.1| Tetratricopeptide repeat family [Salinibacter ruber DSM 13855]
          Length = 1064

 Score = 74.8 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 88/256 (34%), Gaps = 35/256 (13%)

Query: 30  IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
           +A   L       +  +   +  +    +  ++KA    +   + +A   F   +   P 
Sbjct: 470 LATDNLDSALDAYTEAIDRGAAPESVTAKVRFQKAWSLYRNGRYGEAGTEFQALADAHPE 529

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
               +++L       Y   +Y  A    + Y+   P++       Y +  +Y +      
Sbjct: 530 TARGQEALFWGGDTFYQREQYGAARRQFQAYLDTSPDAPQRAGARYALAWTYFK------ 583

Query: 150 YDQRATKLMLQYMSRIVERY-----TNSPYVKGARFYVTVGRNQL--------------- 189
             QR  +   +   R ++ Y     ++ PY + AR  +      L               
Sbjct: 584 --QRRFEPAARSFRRFLDVYDRDSMSDVPYRQDARLRLADCYFALKRYDDARAAYDRVDG 641

Query: 190 AAKEVEI-----GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
           A  E  +       YY   G+  AA  R +  + ++ D+    +A+ RL + +      +
Sbjct: 642 AGVEYALYQGGRALYYA--GQPGAARDRLRRFVDDFPDSPLRPDALYRLGDIHFQEQRYE 699

Query: 245 EAREVVSLIQERYPQG 260
            AR+  + + + +P+ 
Sbjct: 700 AARDAFTQLLDDHPET 715



 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 78/236 (33%), Gaps = 34/236 (14%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
            + V   + +Y +A   L + + +      ++  R++P    AR + L  A      G  
Sbjct: 123 ASHVAAPQALYLEARAALAQGDDAGTRRLLSRLQREYPSHPRARTARLGLAQYYLDQGNP 182

Query: 111 QQAASLGEEYITQYPESKN-VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            +A S  +  I   P   +      YL+G            +Q      L Y  ++  RY
Sbjct: 183 DRAKSQLQ-TIATAPSRPDEGAQALYLLG--------RTEQNQGNPNAALPYFKQVYSRY 233

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRY-----------------------YLKRGEY 206
            N+     A +   V + +L   +     +                       Y + G+Y
Sbjct: 234 PNAELAPAALYARGVTQVRLERYDRATASFERLGEQFPDSPFSENLGTILGEVYYRVGQY 293

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
             A    Q  L + + +  A   +  L E Y AL   ++A     LI E  P   +
Sbjct: 294 ENAATELQRRLPDLTGSTRA-RTLFLLGETYSALGRREDATTQYRLILEELPNSSY 348



 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 73/242 (30%), Gaps = 31/242 (12%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D V     +  +Y+             A +   +   DFP + +   +L     + +   
Sbjct: 637 DRVDGAGVEYALYQGGRALYYAGQPGAARDRLRRFVDDFPDSPLRPDALYRLGDIHFQEQ 696

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +Y+ A     + +  +PE+       Y +G ++              K  +Q    ++E 
Sbjct: 697 RYEAARDAFTQLLDDHPETARAAEAQYAIGDTHYNA--------GEMKDAVQAYRAVLET 748

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKE-----------------------VEIGRYYLKRGE 205
           Y  SP    A   +    N    ++                           R   +RG+
Sbjct: 749 YPESPSASEAASSLFFALNAAGQQDRADKLIAAIANRVPDANMEDRLRYHRARAAYQRGD 808

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
              A+  F+  +   S      +A   L   Y      +EA+  +  + ++YP   +   
Sbjct: 809 SKRALRLFRTFVRTTSTEARVPDAYYYLGLLYADTDQYEEAKNYLRQLTDQYPDSEYLSD 868

Query: 266 VE 267
             
Sbjct: 869 AS 870



 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 70/240 (29%), Gaps = 47/240 (19%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G  R   R    D          +Y    +  +EQ +  A + F Q   D P    A ++
Sbjct: 662 GAARDRLRRFVDDFPDSPLRPDALYRLGDIHFQEQRYEAARDAFTQLLDDHPETARAAEA 721

Query: 97  LLMSAFVQYSAGKYQQAASLGEE------------------YITQYPESKNVDYVYYLVG 138
                   Y+AG+ + A                        +       +  D    L+ 
Sbjct: 722 QYAIGDTHYNAGEMKDAVQAYRAVLETYPESPSASEAASSLFFALNAAGQQ-DRADKLIA 780

Query: 139 MSYAQMIRDVP-------------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            + A  + D               Y +  +K  L+     V   +    V  A +Y+ + 
Sbjct: 781 -AIANRVPDANMEDRLRYHRARAAYQRGDSKRALRLFRTFVRTTSTEARVPDAYYYLGLL 839

Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
                         Y    +Y  A    + +   Y D+E+  +A  RL E Y+     ++
Sbjct: 840 --------------YADTDQYEEAKNYLRQLTDQYPDSEYLSDASLRLGEIYLEEGANEQ 885



 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 57/183 (31%), Gaps = 22/183 (12%)

Query: 47   YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
              D   D    +  Y ++   L+    S A    +Q     P   +   + L    V+  
Sbjct: 895  EQDDTRDELRAQARYGQSQALLQLGRTSAADTLLSQILEAEPQGPLRNAARLGLGRVREE 954

Query: 107  AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
             G+  +A  L    I    + +      Y +G    + +R     Q   +  ++ + R+ 
Sbjct: 955  QGRTDEALDLYRRVIRA-SDGETGAEALYRLG----RQLRR----QGNPQTAIRELERMP 1005

Query: 167  ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
              +   P    AR  +               R Y  RGE   A+  +  V   Y     A
Sbjct: 1006 SLFAGHP-EWEARALLEQ------------ARAYRARGETGQAVQLYDEVQQAYGGTPFA 1052

Query: 227  EEA 229
            E A
Sbjct: 1053 ETA 1055


>gi|208435271|ref|YP_002266937.1| competence lipoprotein [Helicobacter pylori G27]
 gi|208433200|gb|ACI28071.1| competence lipoprotein [Helicobacter pylori G27]
          Length = 220

 Score = 74.8 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 73/201 (36%), Gaps = 10/201 (4%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           + +K  L I  +I V       ++  +D Y             Y+  +  +   N   A 
Sbjct: 4   KHFKTFLFITMAIIVIGTGCANKKKKKDEYNKPAIFW------YQGILREILFANLETAD 57

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
            Y++    +   + +  +++L          +Y  A+   +EYI ++    NVDY+ +L 
Sbjct: 58  NYYSSLQSEHINSPLVPEAMLALGQAHMKKREYVLASFYFDEYIKRFGTKDNVDYLTFLK 117

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE-- 195
             S+    ++   DQ      +  +   +E+Y NS Y     +     +  L   E+   
Sbjct: 118 LQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYM--QIKFILGQNELNRA 175

Query: 196 IGRYYLKRGEYVAAIPRFQLV 216
           I   Y KR +        + +
Sbjct: 176 IANVYKKRHKPEGVKRYLERI 196


>gi|110597344|ref|ZP_01385632.1| putative lipoprotein [Chlorobium ferrooxidans DSM 13031]
 gi|110341180|gb|EAT59648.1| putative lipoprotein [Chlorobium ferrooxidans DSM 13031]
          Length = 284

 Score = 74.8 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 72/232 (31%), Gaps = 39/232 (16%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G+             T      E Y KA     +++++ A               +    
Sbjct: 4   GYFSAVGVSSTKPPATVTALVNEGYAKAERLFAKKDYTGASLALESLIFTSRATALEDDV 63

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
           L + A   Y + +Y  A  +    + Q P +       +++  SY Q+      DQ+ T 
Sbjct: 64  LFLLAQSYYRSKEYLLAGDIYSRLLQQMPSTPYAKTAQFMLAKSYEQLSPHYELDQQYTV 123

Query: 157 LMLQYMSRIVERYTNSP---------------------------YVKGARFY-------- 181
             +   S  ++ Y  +                            Y + +  Y        
Sbjct: 124 KAIDQFSVYLDLYPVTDSLKISNEVDTYRELLKINPDNQSYKESYARASAQYARVDTVRY 183

Query: 182 ----VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
               +   R +LA     I R Y++ G+Y AA   +  V+  +SD  +  ++
Sbjct: 184 AARTIKEFREKLARNSFSIARNYVQLGKYKAAEIFYDEVIRRFSDTGYIHQS 235


>gi|152991092|ref|YP_001356814.1| hypothetical protein NIS_1349 [Nitratiruptor sp. SB155-2]
 gi|151422953|dbj|BAF70457.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
          Length = 212

 Score = 74.4 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 79/190 (41%), Gaps = 16/190 (8%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
              T+   +A C        SS+++   +  D+ +    Y+K V ++   +  KA EYF 
Sbjct: 7   CIATLALLLAGC--------SSKNISEYNKPDIYW----YQKMVRYVSTSDLDKADEYFT 54

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
               +   + + ++++L+ A       +Y  A    +E+I +Y   KNV +  +L   + 
Sbjct: 55  SLQSEHFSSPLLKEAMLIMAQAHMDNEEYLMAKYYLDEFIKRYGNDKNVAFAKFLKIKAS 114

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV--EIGRY 199
               R++  DQ+  +  +       + +  + Y+      +T     +A   +  EI   
Sbjct: 115 FLAFRNINRDQKLLQDTIAEAESYKKEFIENEYMPMVDTMLTKLY--MAEYVLNEEIVAL 172

Query: 200 YLKRGEYVAA 209
           Y +RG+  AA
Sbjct: 173 YERRGKMKAA 182


>gi|283780564|ref|YP_003371319.1| hypothetical protein Psta_2793 [Pirellula staleyi DSM 6068]
 gi|283439017|gb|ADB17459.1| Tetratricopeptide TPR_2 repeat protein [Pirellula staleyi DSM 6068]
          Length = 2545

 Score = 74.4 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 71/228 (31%), Gaps = 32/228 (14%)

Query: 44   RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
            R+V  D        R  Y       +   + +A   ++   R FP   +A  +    A  
Sbjct: 2322 REVMEDYPDPKYAPRVAYLLGQFAQELSQWDEAIRSYDMILRQFPDHTLAPDAQYKLAQC 2381

Query: 104  QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
               AG + QA          +P+S  +  V           I D  Y      +  Q   
Sbjct: 2382 YEEAGDFDQALEAYVTLAATHPKSPLIPNV--------MIRISDYFYKAEKFDIAAQVGE 2433

Query: 164  RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
            + +ER+    +             +LA     +G+ Y K  +Y  A   F      + D 
Sbjct: 2434 KFLERFEGHQHAP-----------RLA---FRVGQCYYKSKQYATAGKSFDQFSKLFPDD 2479

Query: 224  EHAEEAMARLVEAYVALALMDEAREVVSLIQER-----YPQGYWARYV 266
                +A+    E++     + EA      I+       Y +   A+Y 
Sbjct: 2480 ALGADALFWSGESFRLGGNLREA-----FIRYNNCRWKYAESEAAKYA 2522



 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 48/133 (36%), Gaps = 20/133 (15%)

Query: 135  YLVGMSYAQMIRD---VPYDQ---RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
            + +  SY ++ +    +  D       +   + +  ++E Y +  Y       V     Q
Sbjct: 2288 FRIAESYFELFKSHKTLERDDEKKTDLEAGRRILREVMEDYPDPKYAP----RVAYLLGQ 2343

Query: 189  LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
             A  E+          ++  AI  + ++L  + D   A +A  +L + Y      D+A E
Sbjct: 2344 FAQ-ELS---------QWDEAIRSYDMILRQFPDHTLAPDAQYKLAQCYEEAGDFDQALE 2393

Query: 249  VVSLIQERYPQGY 261
                +   +P+  
Sbjct: 2394 AYVTLAATHPKSP 2406



 Score = 43.2 bits (101), Expect = 0.037,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 54/160 (33%), Gaps = 26/160 (16%)

Query: 95   KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
            +  L+ A   +   ++  A S     + +YP +       + +G ++          Q+ 
Sbjct: 976  QMQLLLAKNFFKGQRFDIARSEFTTVVNRYPGTPQATEAEFGIGETFMS--------QKV 1027

Query: 155  TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
                     ++      S  V          R  LA           +RG+   A   F+
Sbjct: 1028 YDQAELVFEKLAR----STEV-DVVVRAEFLRGVLA----------FRRGDRDEARDIFR 1072

Query: 215  LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
             VL    + E A +A+  L E Y      ++  + ++L++
Sbjct: 1073 AVLERVPNVELANQALFNLAEVY---GAEEKYIDQLNLLR 1109


>gi|53720376|ref|YP_109362.1| hypothetical protein BPSL2766 [Burkholderia pseudomallei K96243]
 gi|67643928|ref|ZP_00442671.1| tol-pal system protein YbgF [Burkholderia mallei GB8 horse 4]
 gi|76809959|ref|YP_334630.1| TPR repeat-containing protein [Burkholderia pseudomallei 1710b]
 gi|121598217|ref|YP_992165.1| hypothetical protein BMASAVP1_A0825 [Burkholderia mallei SAVP1]
 gi|124384460|ref|YP_001028611.1| hypothetical protein BMA10229_A2659 [Burkholderia mallei NCTC
           10229]
 gi|126439148|ref|YP_001060217.1| tol-pal system protein YbgF [Burkholderia pseudomallei 668]
 gi|126449408|ref|YP_001081488.1| tol-pal system protein YbgF [Burkholderia mallei NCTC 10247]
 gi|126455302|ref|YP_001067481.1| tol-pal system protein YbgF [Burkholderia pseudomallei 1106a]
 gi|134280274|ref|ZP_01766985.1| tol-pal system protein YbgF [Burkholderia pseudomallei 305]
 gi|166998278|ref|ZP_02264138.1| tol-pal system protein YbgF [Burkholderia mallei PRL-20]
 gi|167720992|ref|ZP_02404228.1| tol-pal system protein YbgF [Burkholderia pseudomallei DM98]
 gi|167739949|ref|ZP_02412723.1| tol-pal system protein YbgF [Burkholderia pseudomallei 14]
 gi|167817186|ref|ZP_02448866.1| tol-pal system protein YbgF [Burkholderia pseudomallei 91]
 gi|167825599|ref|ZP_02457070.1| tol-pal system protein YbgF [Burkholderia pseudomallei 9]
 gi|167847083|ref|ZP_02472591.1| tol-pal system protein YbgF [Burkholderia pseudomallei B7210]
 gi|167895667|ref|ZP_02483069.1| tol-pal system protein YbgF [Burkholderia pseudomallei 7894]
 gi|167904060|ref|ZP_02491265.1| tol-pal system protein YbgF [Burkholderia pseudomallei NCTC 13177]
 gi|167912317|ref|ZP_02499408.1| tol-pal system protein YbgF [Burkholderia pseudomallei 112]
 gi|167920274|ref|ZP_02507365.1| tol-pal system protein YbgF [Burkholderia pseudomallei BCC215]
 gi|217420754|ref|ZP_03452259.1| tol-pal system protein YbgF [Burkholderia pseudomallei 576]
 gi|226194262|ref|ZP_03789861.1| tol-pal system protein YbgF [Burkholderia pseudomallei Pakistan 9]
 gi|237813607|ref|YP_002898058.1| tol-pal system protein YbgF [Burkholderia pseudomallei MSHR346]
 gi|242316228|ref|ZP_04815244.1| tol-pal system protein YbgF [Burkholderia pseudomallei 1106b]
 gi|254175753|ref|ZP_04882413.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
 gi|254180822|ref|ZP_04887420.1| tol-pal system protein YbgF [Burkholderia pseudomallei 1655]
 gi|254191660|ref|ZP_04898163.1| tol-pal system protein YbgF [Burkholderia pseudomallei Pasteur
           52237]
 gi|254194894|ref|ZP_04901324.1| tol-pal system protein YbgF [Burkholderia pseudomallei S13]
 gi|254202359|ref|ZP_04908722.1| tol-pal system protein YbgF [Burkholderia mallei FMH]
 gi|254207693|ref|ZP_04914043.1| tol-pal system protein YbgF [Burkholderia mallei JHU]
 gi|254258392|ref|ZP_04949446.1| tol-pal system protein YbgF [Burkholderia pseudomallei 1710a]
 gi|254299067|ref|ZP_04966517.1| tol-pal system protein YbgF [Burkholderia pseudomallei 406e]
 gi|254356405|ref|ZP_04972681.1| tol-pal system protein YbgF [Burkholderia mallei 2002721280]
 gi|52210790|emb|CAH36774.1| putative exported protein [Burkholderia pseudomallei K96243]
 gi|76579412|gb|ABA48887.1| TPR repeat [Burkholderia pseudomallei 1710b]
 gi|121227027|gb|ABM49545.1| conserved hypothetical protein [Burkholderia mallei SAVP1]
 gi|124292480|gb|ABN01749.1| conserved hypothetical protein [Burkholderia mallei NCTC 10229]
 gi|126218641|gb|ABN82147.1| tol-pal system protein YbgF [Burkholderia pseudomallei 668]
 gi|126228944|gb|ABN92484.1| tol-pal system protein YbgF [Burkholderia pseudomallei 1106a]
 gi|126242278|gb|ABO05371.1| tol-pal system protein YbgF [Burkholderia mallei NCTC 10247]
 gi|134248281|gb|EBA48364.1| tol-pal system protein YbgF [Burkholderia pseudomallei 305]
 gi|147746606|gb|EDK53683.1| tol-pal system protein YbgF [Burkholderia mallei FMH]
 gi|147751587|gb|EDK58654.1| tol-pal system protein YbgF [Burkholderia mallei JHU]
 gi|148025402|gb|EDK83556.1| tol-pal system protein YbgF [Burkholderia mallei 2002721280]
 gi|157809264|gb|EDO86434.1| tol-pal system protein YbgF [Burkholderia pseudomallei 406e]
 gi|157939331|gb|EDO95001.1| tol-pal system protein YbgF [Burkholderia pseudomallei Pasteur
           52237]
 gi|160696797|gb|EDP86767.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
 gi|169651643|gb|EDS84336.1| tol-pal system protein YbgF [Burkholderia pseudomallei S13]
 gi|184211361|gb|EDU08404.1| tol-pal system protein YbgF [Burkholderia pseudomallei 1655]
 gi|217396166|gb|EEC36183.1| tol-pal system protein YbgF [Burkholderia pseudomallei 576]
 gi|225933727|gb|EEH29715.1| tol-pal system protein YbgF [Burkholderia pseudomallei Pakistan 9]
 gi|237502979|gb|ACQ95297.1| tol-pal system protein YbgF [Burkholderia pseudomallei MSHR346]
 gi|238525397|gb|EEP88825.1| tol-pal system protein YbgF [Burkholderia mallei GB8 horse 4]
 gi|242139467|gb|EES25869.1| tol-pal system protein YbgF [Burkholderia pseudomallei 1106b]
 gi|243065358|gb|EES47544.1| tol-pal system protein YbgF [Burkholderia mallei PRL-20]
 gi|254217081|gb|EET06465.1| tol-pal system protein YbgF [Burkholderia pseudomallei 1710a]
          Length = 249

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 18/137 (13%), Positives = 44/137 (32%), Gaps = 8/137 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
             T    + + +  A    +  NF  A   F      +P +     +       QY+   
Sbjct: 121 EGTVQPGETDAFNAASQQFRNGNFKGAAASFRAFIAKYPQSPYQPTAQYWLGNAQYALRD 180

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y+ + +  +  +  YP+          +G         +   Q+A     +   ++V ++
Sbjct: 181 YKGSTATWQGLVKNYPQHPRAADALIAIG------TNQLEQGQKAA--AKKTFEQVVSQF 232

Query: 170 TNSPYVKGARFYVTVGR 186
             S   + A+  +   +
Sbjct: 233 PGSNAAETAQSKLDAIK 249



 Score = 54.0 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 48/126 (38%), Gaps = 22/126 (17%)

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           Q+  G ++ AA+    +I +YP+S       Y +G +   +        R  K       
Sbjct: 138 QFRNGNFKGAAASFRAFIAKYPQSPYQPTAQYWLGNAQYAL--------RDYKGSTATWQ 189

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
            +V+ Y   P    A               + IG   L++G+  AA   F+ V++ +  +
Sbjct: 190 GLVKNYPQHPRAADAL--------------IAIGTNQLEQGQKAAAKKTFEQVVSQFPGS 235

Query: 224 EHAEEA 229
             AE A
Sbjct: 236 NAAETA 241



 Score = 44.3 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 15/109 (13%), Positives = 36/109 (33%), Gaps = 14/109 (12%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         + +Y  SPY   A++++   +  L               +Y  +   
Sbjct: 142 GNFKGAAASFRAFIAKYPQSPYQPTAQYWLGNAQYAL--------------RDYKGSTAT 187

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +Q ++ NY     A +A+  +    +       A++    +  ++P   
Sbjct: 188 WQGLVKNYPQHPRAADALIAIGTNQLEQGQKAAAKKTFEQVVSQFPGSN 236



 Score = 39.7 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 22/59 (37%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            + G +  A   F+  +A Y  + +   A   L  A  AL     +      + + YPQ
Sbjct: 139 FRNGNFKGAAASFRAFIAKYPQSPYQPTAQYWLGNAQYALRDYKGSTATWQGLVKNYPQ 197


>gi|157736844|ref|YP_001489527.1| hypothetical protein Abu_0591 [Arcobacter butzleri RM4018]
 gi|157698698|gb|ABV66858.1| conserved hypothetical membrane protein [Arcobacter butzleri
           RM4018]
          Length = 226

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 68/178 (38%), Gaps = 10/178 (5%)

Query: 33  CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
           C    +   SS+     +   + +    Y K +  +   +  +A + +     +   +  
Sbjct: 24  CATFVFTGCSSKSEQEYNKPALYW----YNKMMKQIASGDLDEADDTYTSLESEHRNSPY 79

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
              ++++         +Y  A    +EYI ++  SK++DY  YL   +     +    DQ
Sbjct: 80  IPTAIMILVNAHIEEEEYALANFYLDEYIKKFGLSKDIDYARYLKIKANFLGFKYQFRDQ 139

Query: 153 RATKLMLQYMSRIVERYTNSPY---VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
           +     L  +    E+Y NSPY   V      + + +   A+ + EI   Y +R + +
Sbjct: 140 QLIDDTLSQIQEFKEKYKNSPYMPLVDTINSRLYMSK---ASFDQEISELYTRRDKPL 194


>gi|134095586|ref|YP_001100661.1| putative transmembrane protein [Herminiimonas arsenicoxydans]
 gi|133739489|emb|CAL62540.1| Conserved hypothetical protein; putative TPR repeat [Herminiimonas
           arsenicoxydans]
          Length = 245

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 53/128 (41%), Gaps = 8/128 (6%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
            ++ +Y+ A+   K  ++ K+   F    + +P +  A  +        Y+   Y+ A +
Sbjct: 123 SEQRMYDNALALFKAGDYKKSGTAFADFIQRYPQSAYAPSAQYWIGNAYYAQRDYRNAIT 182

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
             +  + +YP +         +  SY ++      D+ A K  L+    +V +Y N+P  
Sbjct: 183 AQQALLKKYPANPKAADAMLNIASSYTEL-----KDRTAAKKALES---LVAQYPNTPAA 234

Query: 176 KGARFYVT 183
           + A+  + 
Sbjct: 235 QTAKERLA 242



 Score = 68.6 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 57/145 (39%), Gaps = 22/145 (15%)

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
            ++ + +  +A   + AG Y+++ +   ++I +YP+S       Y +G +Y         
Sbjct: 121 ELSEQRMYDNALALFKAGDYKKSGTAFADFIQRYPQSAYAPSAQYWIGNAYYA------- 173

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
            QR  +  +     ++++Y  +P    A               + I   Y +  +  AA 
Sbjct: 174 -QRDYRNAITAQQALLKKYPANPKAADAM--------------LNIASSYTELKDRTAAK 218

Query: 211 PRFQLVLANYSDAEHAEEAMARLVE 235
              + ++A Y +   A+ A  RL  
Sbjct: 219 KALESLVAQYPNTPAAQTAKERLAN 243



 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 14/109 (12%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K      +  ++RY  S Y   A+++              IG  Y  + +Y  AI  
Sbjct: 138 GDYKKSGTAFADFIQRYPQSAYAPSAQYW--------------IGNAYYAQRDYRNAITA 183

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            Q +L  Y     A +AM  +  +Y  L     A++ +  +  +YP   
Sbjct: 184 QQALLKKYPANPKAADAMLNIASSYTELKDRTAAKKALESLVAQYPNTP 232


>gi|315636013|ref|ZP_07891272.1| competence lipoprotein [Arcobacter butzleri JV22]
 gi|315479669|gb|EFU70343.1| competence lipoprotein [Arcobacter butzleri JV22]
          Length = 223

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 68/178 (38%), Gaps = 10/178 (5%)

Query: 33  CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
           C    +   SS+     +   + +    Y K +  +   +  +A + +     +   +  
Sbjct: 21  CATFVFTGCSSKSEQEYNKPALYW----YNKMMKQIASGDLDEADDTYTSLESEHRNSPY 76

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
              ++++         +Y  A    +EYI ++  SK++DY  YL   +     +    DQ
Sbjct: 77  IPTAIMILVNAHIEEEEYALANFYLDEYIKKFGLSKDIDYARYLKIKANFLGFKYQFRDQ 136

Query: 153 RATKLMLQYMSRIVERYTNSPY---VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
           +     L  +    E+Y NSPY   V      + + +   A+ + EI   Y +R + +
Sbjct: 137 QLIDDTLSQIQEFKEKYKNSPYMPLVDTINSRLYMSK---ASFDQEISELYTRRDKPL 191


>gi|167563921|ref|ZP_02356837.1| hypothetical protein BoklE_15300 [Burkholderia oklahomensis EO147]
 gi|167571056|ref|ZP_02363930.1| hypothetical protein BoklC_14510 [Burkholderia oklahomensis C6786]
          Length = 249

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 18/137 (13%), Positives = 44/137 (32%), Gaps = 8/137 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
             T    + + +  A    +  NF  A   F      +P +     +       QY+   
Sbjct: 121 EGTVQPGETDAFNAASQQFRNGNFKGAAASFRAFIAKYPQSPYQPTAQYWLGNAQYALRD 180

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y+ + +  +  +  YP+          +G         +   Q+A     +   ++V ++
Sbjct: 181 YKGSTATWQGLVKNYPQHPRAADALIAIG------TNQLEQGQKAA--AKKTFEQVVSQF 232

Query: 170 TNSPYVKGARFYVTVGR 186
             S   + A+  +   +
Sbjct: 233 PGSNAAETAQSKLDAIK 249



 Score = 54.0 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 48/126 (38%), Gaps = 22/126 (17%)

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           Q+  G ++ AA+    +I +YP+S       Y +G +   +        R  K       
Sbjct: 138 QFRNGNFKGAAASFRAFIAKYPQSPYQPTAQYWLGNAQYAL--------RDYKGSTATWQ 189

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
            +V+ Y   P    A               + IG   L++G+  AA   F+ V++ +  +
Sbjct: 190 GLVKNYPQHPRAADAL--------------IAIGTNQLEQGQKAAAKKTFEQVVSQFPGS 235

Query: 224 EHAEEA 229
             AE A
Sbjct: 236 NAAETA 241



 Score = 44.3 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 15/109 (13%), Positives = 36/109 (33%), Gaps = 14/109 (12%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         + +Y  SPY   A++++   +  L               +Y  +   
Sbjct: 142 GNFKGAAASFRAFIAKYPQSPYQPTAQYWLGNAQYAL--------------RDYKGSTAT 187

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +Q ++ NY     A +A+  +    +       A++    +  ++P   
Sbjct: 188 WQGLVKNYPQHPRAADALIAIGTNQLEQGQKAAAKKTFEQVVSQFPGSN 236



 Score = 39.7 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 22/59 (37%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            + G +  A   F+  +A Y  + +   A   L  A  AL     +      + + YPQ
Sbjct: 139 FRNGNFKGAAASFRAFIAKYPQSPYQPTAQYWLGNAQYALRDYKGSTATWQGLVKNYPQ 197


>gi|261749495|ref|YP_003257181.1| hypothetical protein BPLAN_424 [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497588|gb|ACX84038.1| conserved hypothetical protein [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 227

 Score = 73.6 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 50/131 (38%), Gaps = 4/131 (3%)

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
            +  G +      +   DQ  T+  +  +++ + +Y NS  ++  R  +     ++  ++
Sbjct: 80  LFKRGFNEFIHSLNFDLDQTKTRAAINTLNQFITKYPNSQKIQEIRNIIVKLIKKIEKRD 139

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR----EV 249
             I   Y    +Y AA   F+  +  Y  + + E+A+ ++      +A   E      E 
Sbjct: 140 YYIANTYFIMRKYKAASIYFKDFIKKYPKSIYKEKALYKICIITYKMADNKEKALDFFEA 199

Query: 250 VSLIQERYPQG 260
                + YP  
Sbjct: 200 YQRYVKLYPDS 210



 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 27/71 (38%), Gaps = 4/71 (5%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY-QQAAS---L 116
           Y  A  +   + +  A  YF    + +P +    K+L     + Y      ++A      
Sbjct: 140 YYIANTYFIMRKYKAASIYFKDFIKKYPKSIYKEKALYKICIITYKMADNKEKALDFFEA 199

Query: 117 GEEYITQYPES 127
            + Y+  YP+S
Sbjct: 200 YQRYVKLYPDS 210



 Score = 38.6 bits (89), Expect = 0.99,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 53/157 (33%), Gaps = 27/157 (17%)

Query: 38  WERQSSRDVYLDSVTDVRYQREVYEKAVLF--------LKEQNFSKAYEYFNQCSRDFPF 89
           W   S +D+   +  +    R ++++            L +     A    NQ    +P 
Sbjct: 59  WNFFSKKDLSNSNGPNSEENR-LFKRGFNEFIHSLNFDLDQTKTRAAINTLNQFITKYPN 117

Query: 90  AGVARKSL--------------LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           +   ++                   A   +   KY+ A+   +++I +YP+S   +   Y
Sbjct: 118 SQKIQEIRNIIVKLIKKIEKRDYYIANTYFIMRKYKAASIYFKDFIKKYPKSIYKEKALY 177

Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
            + +   +M  +    +       +   R V+ Y +S
Sbjct: 178 KICIITYKMADN----KEKALDFFEAYQRYVKLYPDS 210


>gi|298737038|ref|YP_003729568.1| hypothetical protein HPB8_1547 [Helicobacter pylori B8]
 gi|298356232|emb|CBI67104.1| conserved hypothetical protein [Helicobacter pylori B8]
          Length = 220

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 73/201 (36%), Gaps = 10/201 (4%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           + +K  L I  ++ V       ++  +D Y             Y+  +  +   N   A 
Sbjct: 4   KYFKTFLFIAMAMIVIGTGCANKKKKKDEYNKPAIFW------YQGILREILFANLETAD 57

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
            Y++    +   + +  +++L          +Y  A+   +EYI ++    NVDY+ +L 
Sbjct: 58  NYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVDYLTFLK 117

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE-- 195
             S+    ++   DQ      +  +   +E+Y NS Y     +     +  L   E+   
Sbjct: 118 LQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYM--QIKFILGQNELNRA 175

Query: 196 IGRYYLKRGEYVAAIPRFQLV 216
           I   Y KR +        + +
Sbjct: 176 IANVYKKRHKPEGVKRYLERI 196


>gi|53725633|ref|YP_103662.1| hypothetical protein BMA2083 [Burkholderia mallei ATCC 23344]
 gi|52429056|gb|AAU49649.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344]
          Length = 234

 Score = 73.2 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 18/137 (13%), Positives = 44/137 (32%), Gaps = 8/137 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
             T    + + +  A    +  NF  A   F      +P +     +       QY+   
Sbjct: 106 EGTVQPGETDAFNAASQQFRNGNFKGAAASFRAFIAKYPQSPYQPTAQYWLGNAQYALRD 165

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y+ + +  +  +  YP+          +G         +   Q+A     +   ++V ++
Sbjct: 166 YKGSTATWQGLVKNYPQHPRAADALIAIG------TNQLEQGQKAA--AKKTFEQVVSQF 217

Query: 170 TNSPYVKGARFYVTVGR 186
             S   + A+  +   +
Sbjct: 218 PGSNAAETAQSKLDAIK 234



 Score = 53.2 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 48/126 (38%), Gaps = 22/126 (17%)

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           Q+  G ++ AA+    +I +YP+S       Y +G +   +        R  K       
Sbjct: 123 QFRNGNFKGAAASFRAFIAKYPQSPYQPTAQYWLGNAQYAL--------RDYKGSTATWQ 174

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
            +V+ Y   P    A               + IG   L++G+  AA   F+ V++ +  +
Sbjct: 175 GLVKNYPQHPRAADAL--------------IAIGTNQLEQGQKAAAKKTFEQVVSQFPGS 220

Query: 224 EHAEEA 229
             AE A
Sbjct: 221 NAAETA 226



 Score = 44.0 bits (103), Expect = 0.025,   Method: Composition-based stats.
 Identities = 15/109 (13%), Positives = 36/109 (33%), Gaps = 14/109 (12%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         + +Y  SPY   A++++   +  L               +Y  +   
Sbjct: 127 GNFKGAAASFRAFIAKYPQSPYQPTAQYWLGNAQYAL--------------RDYKGSTAT 172

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +Q ++ NY     A +A+  +    +       A++    +  ++P   
Sbjct: 173 WQGLVKNYPQHPRAADALIAIGTNQLEQGQKAAAKKTFEQVVSQFPGSN 221



 Score = 39.3 bits (91), Expect = 0.58,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 22/59 (37%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            + G +  A   F+  +A Y  + +   A   L  A  AL     +      + + YPQ
Sbjct: 124 FRNGNFKGAAASFRAFIAKYPQSPYQPTAQYWLGNAQYALRDYKGSTATWQGLVKNYPQ 182


>gi|298372047|ref|ZP_06982037.1| TPR-domain containing protein [Bacteroidetes oral taxon 274 str.
           F0058]
 gi|298274951|gb|EFI16502.1| TPR-domain containing protein [Bacteroidetes oral taxon 274 str.
           F0058]
          Length = 999

 Score = 73.2 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 75/203 (36%), Gaps = 26/203 (12%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           Y     +  ++ +  A ++F+Q     P   + +   +L       +    ++ A     
Sbjct: 498 YTAGYSYFYQEQWDNARQWFSQYLAKEPDKKSNLYYDALNRIGDCYFYRRDFRNAVDAYS 557

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           +       S +VDY  Y         I+ +   Q+     +  + R++++Y NS Y   A
Sbjct: 558 KVSGSN--STDVDYALYQKA-----FIKGL---QKKYGEEIADLQRLIKKYPNSVYAPKA 607

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
           +               EIGR Y+ + +Y  AI  +  VL NY     A +A+      Y 
Sbjct: 608 Q--------------YEIGRAYVLQNKYSKAIEEYNTVLTNYPQTPIARKAILETGMLYE 653

Query: 239 ALALMDEAREVVSLIQERYPQGY 261
            +   D+A      + E+YP   
Sbjct: 654 NMGQTDKAIAAYKNVVEKYPGSE 676



 Score = 59.7 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 73/225 (32%), Gaps = 39/225 (17%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y+KA +   ++ + +      +  + +P +  A K+            KY +A      
Sbjct: 571 LYQKAFIKGLQKKYGEEIADLQRLIKKYPNSVYAPKAQYEIGRAYVLQNKYSKAIEEYNT 630

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +T YP++          GM Y  M          T   +     +VE+Y  S     A 
Sbjct: 631 VLTNYPQTPIARKAILETGMLYENM--------GQTDKAIAAYKNVVEKYPGSEQTNVAL 682

Query: 180 FYVTVGR----------------------NQLAAKE-----VEIGRYYLKRGEYVAAIPR 212
             +                          N  A+KE     +   R Y K+  Y AA   
Sbjct: 683 ESIQNLYVDKNDVASYVNYSKSLGTTTVSNVSASKEDSLSYIAAERVYAKKD-YKAAADS 741

Query: 213 FQLVLANY---SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
           ++  L+ +   ++ ++   A   L E+Y     M+ A      + 
Sbjct: 742 WESYLSKFCKNNNTQNCINATYYLAESYYETKNMNMALSQYRALA 786



 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 81/232 (34%), Gaps = 33/232 (14%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++   V +  E+ +++A +Y +Q         + +++ L      +   +Y +A    + 
Sbjct: 421 LFRLGVNYFNERQYTQAEDYLSQSIALNNSQSITQQAYLFRGETHFRQKEYNKAIDDLKT 480

Query: 120 YITQYPESKNVD--YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYV 175
           + T+   +        +Y  G SY          Q       Q+ S+ + +  +  S   
Sbjct: 481 FTTKNKNNNTAAASKAFYTAGYSYFY--------QEQWDNARQWFSQYLAKEPDKKSNLY 532

Query: 176 KGARFYVTVG-------RNQLAAKEVEIG------RY--YLK------RGEYVAAIPRFQ 214
             A   +          RN + A     G       Y  Y K      + +Y   I   Q
Sbjct: 533 YDALNRIGDCYFYRRDFRNAVDAYSKVSGSNSTDVDYALYQKAFIKGLQKKYGEEIADLQ 592

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
            ++  Y ++ +A +A   +  AYV      +A E  + +   YPQ   AR  
Sbjct: 593 RLIKKYPNSVYAPKAQYEIGRAYVLQNKYSKAIEEYNTVLTNYPQTPIARKA 644



 Score = 40.5 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 64/201 (31%), Gaps = 37/201 (18%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAASLGEE 119
                 E+N+  A  Y         +A  A K      F      Y A KY +A     +
Sbjct: 242 GEASYNEKNYKDAITYLTL------YAKNASKVQREDMFILGISLYKANKYAEAIQYLSK 295

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
             T+  + +  +  Y+ +G    ++      D +  K+              S Y  G  
Sbjct: 296 ATTK--DDELAENAYFTIGQCALKI-----NDIQQAKMAF-----------KSAYSTGFS 337

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGE-YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
             +       A     I  Y  + G  +      F   L  Y  ++HA+E +  L  AY+
Sbjct: 338 KKIRE----EALYNYAIATY--RTGSVFGETTKAFDTFLNEYPLSKHADEILNLLATAYI 391

Query: 239 ALALMDEAREVVSLIQERYPQ 259
                 EA + ++ I    P 
Sbjct: 392 TEGNYAEALKAINSI--NNPN 410



 Score = 39.7 bits (92), Expect = 0.41,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 83/254 (32%), Gaps = 30/254 (11%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQN-FSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
           +  Y    +    +  +Y  A+   +  + F +  + F+    ++P +  A + L + A 
Sbjct: 329 KSAYSTGFSKKIREEALYNYAIATYRTGSVFGETTKAFDTFLNEYPLSKHADEILNLLAT 388

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNV---DYVYYLVGMSYAQ------------MIRD 147
              + G Y +A           P  K V   +YV + +G++Y                  
Sbjct: 389 AYITEGNYAEALKAINS--INNPNQKIVQAKEYVLFRLGVNYFNERQYTQAEDYLSQSIA 446

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPY---VKGARFYVTVGRN---QLAAKEVEIGRY-Y 200
           +   Q  T+    +       +    Y   +   + + T  +N     A+K      Y Y
Sbjct: 447 LNNSQSITQQAYLFRGE--THFRQKEYNKAIDDLKTFTTKNKNNNTAAASKAFYTAGYSY 504

Query: 201 LKRGEYVAAIPRFQLVLANYSD--AEHAEEAMARLVEAY-VALALMDEAREVVSLIQERY 257
             + ++  A   F   LA   D  +    +A+ R+ + Y       +       +     
Sbjct: 505 FYQEQWDNARQWFSQYLAKEPDKKSNLYYDALNRIGDCYFYRRDFRNAVDAYSKVSGSNS 564

Query: 258 PQGYWARYVETLVK 271
               +A Y +  +K
Sbjct: 565 TDVDYALYQKAFIK 578


>gi|78189867|ref|YP_380205.1| TPR repeat-containing protein [Chlorobium chlorochromatii CaD3]
 gi|78172066|gb|ABB29162.1| TPR repeat [Chlorobium chlorochromatii CaD3]
          Length = 287

 Score = 73.2 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 51/135 (37%), Gaps = 8/135 (5%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           ++          ++++ V    ++N+  A + F    + FP + +   +    A   +S 
Sbjct: 161 VEPTPATVNDASMFQEGVTLFGKKNYGAARQTFMALIKRFPTSLLVGDAQFYIADSFFSE 220

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +Y+QA    +E I +YP++       Y    S  ++I DV                +V 
Sbjct: 221 KRYEQAIVEYQEVIAKYPKNSKRPAALYRQARS-FELIGDVA-------NAKTRYKDVVN 272

Query: 168 RYTNSPYVKGARFYV 182
            Y  SP    A+  +
Sbjct: 273 VYPTSPEAALAKKKL 287



 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 34/109 (31%), Gaps = 14/109 (12%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           +      Q    +++R+  S  V  A+                I   +     Y  AI  
Sbjct: 184 KNYGAARQTFMALIKRFPTSLLVGDAQ--------------FYIADSFFSEKRYEQAIVE 229

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +Q V+A Y        A+ R   ++  +  +  A+     +   YP   
Sbjct: 230 YQEVIAKYPKNSKRPAALYRQARSFELIGDVANAKTRYKDVVNVYPTSP 278


>gi|73541317|ref|YP_295837.1| transmembrane protein [Ralstonia eutropha JMP134]
 gi|72118730|gb|AAZ60993.1| probable transmembrane protein [Ralstonia eutropha JMP134]
          Length = 284

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 19/145 (13%), Positives = 51/145 (35%), Gaps = 11/145 (7%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           S+ D    S    + +   Y+ A+   +  +F  A   F+   + +P +     +     
Sbjct: 151 SAEDRQGTSAPGEKPE---YDAALRHFQAGDFKSAGNSFSSFIKKYPQSPYVPLAQYWLG 207

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
              Y+   Y+ +  + ++ I   P    V     ++ ++  Q+       Q+      + 
Sbjct: 208 NSLYAQRDYKGSTWVLQQMIHANPTHPKVPDA--MIAVANNQLESG----QKPA--ARKT 259

Query: 162 MSRIVERYTNSPYVKGARFYVTVGR 186
           + ++V +Y  +   + A   +    
Sbjct: 260 LEQVVAKYPGTEGARTANNRLKTLH 284



 Score = 49.0 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 41/119 (34%), Gaps = 14/119 (11%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K      S  +++Y  SPYV  A++++           +   R Y K   +V     
Sbjct: 177 GDFKSAGNSFSSFIKKYPQSPYVPLAQYWL--------GNSLYAQRDY-KGSTWV----- 222

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
            Q ++          +AM  +    +       AR+ +  +  +YP    AR     +K
Sbjct: 223 LQQMIHANPTHPKVPDAMIAVANNQLESGQKPAARKTLEQVVAKYPGTEGARTANNRLK 281


>gi|113868783|ref|YP_727272.1| hypothetical protein H16_A2827 [Ralstonia eutropha H16]
 gi|113527559|emb|CAJ93904.1| hypothetical membrane associated protein [Ralstonia eutropha H16]
          Length = 252

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 18/126 (14%), Positives = 47/126 (37%), Gaps = 8/126 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A+   +  +F  A   F+   + +P +     +        Y+   Y+ + S+ +  
Sbjct: 135 YDAALKQFQAGDFKSAGSSFSAFVKKYPQSPYVPLAQYWLGNSLYAQRDYKGSTSVLQTM 194

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           I   P    V     ++ ++  Q+       Q+A     + + ++V +Y  +   + A  
Sbjct: 195 INNNPTHPKVPDA--MIAVANNQLESG----QKAA--ARKTLEQVVAKYPGTEGAQAASN 246

Query: 181 YVTVGR 186
            +   +
Sbjct: 247 RLKTLK 252



 Score = 56.7 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/140 (25%), Positives = 53/140 (37%), Gaps = 22/140 (15%)

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
            K    +A  Q+ AG ++ A S    ++ +YP+S  V    Y +G S           QR
Sbjct: 131 EKPEYDAALKQFQAGDFKSAGSSFSAFVKKYPQSPYVPLAQYWLGNSLYA--------QR 182

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
             K     +  ++      P V  A   + V  NQL            + G+  AA    
Sbjct: 183 DYKGSTSVLQTMINNNPTHPKVPDA--MIAVANNQL------------ESGQKAAARKTL 228

Query: 214 QLVLANYSDAEHAEEAMARL 233
           + V+A Y   E A+ A  RL
Sbjct: 229 EQVVAKYPGTEGAQAASNRL 248



 Score = 49.3 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 43/119 (36%), Gaps = 14/119 (11%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K      S  V++Y  SPYV  A++++    N L          Y +R  Y  +   
Sbjct: 145 GDFKSAGSSFSAFVKKYPQSPYVPLAQYWLG---NSL----------YAQRD-YKGSTSV 190

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
            Q ++ N        +AM  +    +       AR+ +  +  +YP    A+     +K
Sbjct: 191 LQTMINNNPTHPKVPDAMIAVANNQLESGQKAAARKTLEQVVAKYPGTEGAQAASNRLK 249


>gi|171463095|ref|YP_001797208.1| tol-pal system protein YbgF [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171192633|gb|ACB43594.1| tol-pal system protein YbgF [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 243

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 52/134 (38%), Gaps = 8/134 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S T    +++ Y+ A+   +  N  KA + F   +  +P +     +L      +Y+  +
Sbjct: 115 SGTVQPGEKKAYDDALKAFQAGNLKKADDSFAAFTAKYPKSPYLPLALYWGGNSKYANKE 174

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y  A S  +  I +YP    +     +V +  AQ+               +  S I+ +Y
Sbjct: 175 YAGAISQLQNLIKKYPNHPRIPAA--MVTLGNAQLESG------NKAAAKKIFSDIIAKY 226

Query: 170 TNSPYVKGARFYVT 183
            ++   K A+  + 
Sbjct: 227 PDTEAAKDAQQLIA 240



 Score = 54.0 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 45/118 (38%), Gaps = 14/118 (11%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K      +    +Y  SPY+  A ++   G ++ A KE            Y  AI +
Sbjct: 136 GNLKKADDSFAAFTAKYPKSPYLPLALYW--GGNSKYANKE------------YAGAISQ 181

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
            Q ++  Y +      AM  L  A +       A+++ S I  +YP    A+  + L+
Sbjct: 182 LQNLIKKYPNHPRIPAAMVTLGNAQLESGNKAAAKKIFSDIIAKYPDTEAAKDAQQLI 239


>gi|189500638|ref|YP_001960108.1| tol-pal system protein YbgF [Chlorobium phaeobacteroides BS1]
 gi|189496079|gb|ACE04627.1| tol-pal system protein YbgF [Chlorobium phaeobacteroides BS1]
          Length = 267

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 21/153 (13%), Positives = 47/153 (30%), Gaps = 8/153 (5%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
                 G    S+    + S       + +Y+    F     +  A + F      +P +
Sbjct: 123 TAADTAGVAPGSASAEAVPSSAPAIDDQGLYKAGKTFFDGYKYPSARKEFGLLLDTYPSS 182

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
             A  +    A   ++   +++A    +  I +YP+       Y+  G+S+  +      
Sbjct: 183 AFADDAQYYIAETYFNEKWFEKAILEYQLVIEKYPKGDKRPAAYFKQGLSFENI------ 236

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
               T         +V+ Y  S   +     + 
Sbjct: 237 --GDTTNAKVRYRELVQLYPESNEARIVNSKMQ 267



 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 40/114 (35%), Gaps = 14/114 (12%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
             +    +++ Y +S +   A+                I   Y     +  AI  +QLV+
Sbjct: 168 ARKEFGLLLDTYPSSAFADDAQ--------------YYIAETYFNEKWFEKAILEYQLVI 213

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
             Y   +    A  +   ++  +     A+     + + YP+   AR V + ++
Sbjct: 214 EKYPKGDKRPAAYFKQGLSFENIGDTTNAKVRYRELVQLYPESNEARIVNSKMQ 267


>gi|302038648|ref|YP_003798970.1| putative tol-Pal system protein YbgF [Candidatus Nitrospira
           defluvii]
 gi|300606712|emb|CBK43045.1| putative Tol-Pal system protein YbgF (modular protein) [Candidatus
           Nitrospira defluvii]
          Length = 558

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 46/132 (34%), Gaps = 8/132 (6%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
             RE YE+ +   K+ +   A + F +     P + +A  +        Y    + +A  
Sbjct: 433 ADRESYERTLTRFKDGDLDGARQGFAEFLLQHPHSDLAPNARFWLGESYYGKKDFSRAID 492

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
             ++    +P S+ V       G +Y  +        +  K     + ++++ Y  SP  
Sbjct: 493 AYDQVQLNHPASEKVPAALLKKGYAYLAL--------KDRKKAASALKQVIDLYPKSPEA 544

Query: 176 KGARFYVTVGRN 187
             A   +   + 
Sbjct: 545 NKAMDKLNQLKE 556



 Score = 45.9 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 42/109 (38%), Gaps = 14/109 (12%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
             Q  +  + ++ +S     ARF++              G  Y  + ++  AI  +  V 
Sbjct: 453 ARQGFAEFLLQHPHSDLAPNARFWL--------------GESYYGKKDFSRAIDAYDQVQ 498

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
            N+  +E    A+ +   AY+AL    +A   +  + + YP+   A   
Sbjct: 499 LNHPASEKVPAALLKKGYAYLALKDRKKAASALKQVIDLYPKSPEANKA 547



 Score = 44.0 bits (103), Expect = 0.021,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 42/129 (32%), Gaps = 22/129 (17%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           +  G    A     E++ Q+P S       + +G SY    +D           +    +
Sbjct: 445 FKDGDLDGARQGFAEFLLQHPHSDLAPNARFWLGESYYGK-KDFSR-------AIDAYDQ 496

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +   +  S  V  A          LA K+         R +   A    + V+  Y  + 
Sbjct: 497 VQLNHPASEKVPAALLKKGYAY--LALKD---------RKK---AASALKQVIDLYPKSP 542

Query: 225 HAEEAMARL 233
            A +AM +L
Sbjct: 543 EANKAMDKL 551


>gi|313675083|ref|YP_004053079.1| outer membrane assembly lipoprotein yfio [Marivirga tractuosa DSM
           4126]
 gi|312941781|gb|ADR20971.1| outer membrane assembly lipoprotein YfiO [Marivirga tractuosa DSM
           4126]
          Length = 280

 Score = 72.8 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 40/225 (17%), Positives = 81/225 (36%), Gaps = 16/225 (7%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A+ + ++  + KA     Q       +  A  +     +  Y   +Y  A+   + +
Sbjct: 43  YDAAISYYEQGEYYKANVLLEQILPIIKGSEKAEIANFYYGYTYYYQEQYLLASHYFKTF 102

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
              +  S+  +   ++   S  Q       DQ ++K  +  +   +  + NS YV  A  
Sbjct: 103 YDTFNRSEFAEEARFMFAFSLFQDSPRYNLDQTSSKEAIVALQGFINLFPNSEYVPKADA 162

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYV------AAIPRFQLVLANYSDAEHAEEAMARLV 234
            ++  R++L  K  E    Y    +++      AA+  F     ++  ++  EE     +
Sbjct: 163 ALSQLRSKLERKAYEKALLYYDLKKHMTGEFLKAALVEFDNFQDDFPGSQFTEEIRYLEI 222

Query: 235 EAYVALALMD----------EAREVVSLIQERYPQGYWARYVETL 269
           EA   LA +           EA +      E Y Q  +    E +
Sbjct: 223 EAMYKLAQVSIYSVRKERYLEAMDFYEDFIETYEQSNYLPKAEKI 267


>gi|239906856|ref|YP_002953597.1| hypothetical protein DMR_22200 [Desulfovibrio magneticus RS-1]
 gi|239796722|dbj|BAH75711.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 312

 Score = 72.8 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 51/128 (39%), Gaps = 8/128 (6%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
                VY K +     + + +A   F + +R+F  + +   ++  +    +  G +  AA
Sbjct: 191 SPADAVYAKGLTSFNSRQYQQALGIFQEFARNFKSSPLMANAMFWTGECYFQLGDFANAA 250

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
              +E I +YP+S       +  G++++++                    ++++Y +S +
Sbjct: 251 LSYQEVIEKYPKSAKHADALFKRGVAFSKL--------GNAGAAKLSFKEVIDKYPDSAF 302

Query: 175 VKGARFYV 182
              A+  +
Sbjct: 303 AARAKTMM 310



 Score = 53.6 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 47/140 (33%), Gaps = 22/140 (15%)

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
               Y  G++            R  +  L         + +SP +  A F+         
Sbjct: 193 ADAVYAKGLTSFNS--------RQYQQALGIFQEFARNFKSSPLMANAMFWTGEC----- 239

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
                    Y + G++  A   +Q V+  Y  +    +A+ +   A+  L     A+   
Sbjct: 240 ---------YFQLGDFANAALSYQEVIEKYPKSAKHADALFKRGVAFSKLGNAGAAKLSF 290

Query: 251 SLIQERYPQGYWARYVETLV 270
             + ++YP   +A   +T++
Sbjct: 291 KEVIDKYPDSAFAARAKTMM 310


>gi|298505600|gb|ADI84323.1| lytic transglycosylase domain protein [Geobacter sulfurreducens
           KN400]
          Length = 748

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 75/251 (29%), Gaps = 52/251 (20%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++ +A   +    + +A E   +    +P +   RK+ ++ A  Q++   Y+QA +    
Sbjct: 96  LFWQAEALMAATRYDEAEEVLQRLVGTWPDSPTLRKARMLLADAQFARKDYRQALASYIR 155

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           +I  YP   +         +    +           +  +Q +  I   Y  SP  + A 
Sbjct: 156 FIELYPSGTDSVTANLKTALCREGLDD--------PRRAVQELRAIWLAYPASPVAETAE 207

Query: 180 FYVTV----------------------------------------GRNQLAAK----EVE 195
             +                                           + QLA       ++
Sbjct: 208 QELKRLEALGFPAVPLTPDELLKRGTTLYNLGKYERALAVFNTIPLKEQLAGFNDRVALK 267

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           IG   LK   Y  A   F  ++      E A+EA   L  A       DEA      + E
Sbjct: 268 IGETLLKLRRYKDAARTFSSLIEREPKREIADEARFLLARAQNKAGNDDEAFLGFLKLAE 327

Query: 256 RYPQGYWARYV 266
             P   WA   
Sbjct: 328 TAPTSEWADNA 338



 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 72/202 (35%), Gaps = 31/202 (15%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
               LK + +  A   F+      P   +A ++  + A  Q  AG   +A      ++  
Sbjct: 269 GETLLKLRRYKDAARTFSSLIEREPKREIADEARFLLARAQNKAGNDDEAFLG---FLKL 325

Query: 124 ---YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
               P S+  D    L   ++ +  +    DQ      L  + +++  Y  +     A +
Sbjct: 326 AETAPTSEWADNAL-LEA-AFVRKFQGRYADQ------LAVLEKLLTTYPGTKLKPRAMW 377

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
                R                 G+Y +A   F+L+ A+   A++ E A+     +   +
Sbjct: 378 ETAWAR--------------YNTGDYRSAAESFRLLTAS---ADYRERALYWHGRSLQRI 420

Query: 241 ALMDEAREVVSLIQERYPQGYW 262
                AR+  +++ E YP  ++
Sbjct: 421 GEETVARQSFAMLAEEYPFSFY 442



 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 45/133 (33%), Gaps = 17/133 (12%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           + T       + E A +   +  ++       +    +P   +  +++  +A+ +Y+ G 
Sbjct: 329 APTSEWADNALLEAAFVRKFQGRYADQLAVLEKLLTTYPGTKLKPRAMWETAWARYNTGD 388

Query: 110 YQQAASLGEEYITQYPESKNVDY---VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
           Y    S  E +      + + DY     Y  G       R +      T +  Q  + + 
Sbjct: 389 Y---RSAAESFRLL---TASADYRERALYWHG-------RSLQRIGEET-VARQSFAMLA 434

Query: 167 ERYTNSPYVKGAR 179
           E Y  S Y   A 
Sbjct: 435 EEYPFSFYTFTAT 447



 Score = 40.5 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 5/90 (5%)

Query: 50  SVTDVRYQREVYEKAVLFL-----KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           S+ +   +RE+ ++A   L     K  N  +A+  F + +   P +  A  +LL +AFV+
Sbjct: 287 SLIEREPKREIADEARFLLARAQNKAGNDDEAFLGFLKLAETAPTSEWADNALLEAAFVR 346

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVY 134
              G+Y    ++ E+ +T YP +K      
Sbjct: 347 KFQGRYADQLAVLEKLLTTYPGTKLKPRAM 376


>gi|91216378|ref|ZP_01253345.1| putative TPR-repeat protein [Psychroflexus torquis ATCC 700755]
 gi|91185516|gb|EAS71892.1| putative TPR-repeat protein [Psychroflexus torquis ATCC 700755]
          Length = 1003

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 73/201 (36%), Gaps = 24/201 (11%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A  + K +N+     +F         +     + +     Q++ G+Y  A       
Sbjct: 502 YNIAYAYFKIKNYRSTISFFESFIAIERPSQRLHDAYVRLGDAQFALGQYWPAMEAYNSA 561

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           I    ++ N DY ++    SY  + R+           ++ ++  V+ Y  S Y   A  
Sbjct: 562 IAM--KNYNSDYAFFQKAYSYGFVDRNAQK--------IENLNLFVQSYPKSIYKDDAL- 610

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
                         E+G  Y+   E  AAI  +Q +L NY  + +  +A+++L   Y   
Sbjct: 611 -------------FELGNTYVAENEDQAAITTYQNILTNYKQSIYYPKALSKLALIYFNK 657

Query: 241 ALMDEAREVVSLIQERYPQGY 261
               EA   +  + + YP   
Sbjct: 658 GENQEALMRLKQLIKEYPNSQ 678



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/242 (13%), Positives = 85/242 (35%), Gaps = 48/242 (19%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
              +     ++E    ++ E     A   +     ++  +    K+L   A + ++ G+ 
Sbjct: 601 PKSIYKDDALFELGNTYVAENEDQAAITTYQNILTNYKQSIYYPKALSKLALIYFNKGEN 660

Query: 111 QQAASLGEEYITQYPESKNV------------------DYVYYLVGMSY----------- 141
           Q+A    ++ I +YP S+                    +Y  ++ G+ +           
Sbjct: 661 QEALMRLKQLIKEYPNSQEALQAVQTARLIYIDLGQTDEYATWVRGLDFVEVADSDIEEA 720

Query: 142 -AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
             +   +   D   T   ++   + +E + N      + FY+                  
Sbjct: 721 TYEAAENKFLDNE-TDKAIEGFKKYLEEFPNGKNSLKSNFYLAQSL-------------- 765

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI--QERYP 258
               +  A++P ++ V+ +   +E  EE++ RL + Y++    D+A   ++ +  +  + 
Sbjct: 766 FNSDQRQASVPYYEEVINS-RSSEFTEESLRRLAQIYLSEKNYDQAITSLNRLETEANFS 824

Query: 259 QG 260
           Q 
Sbjct: 825 QN 826



 Score = 45.5 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 67/229 (29%), Gaps = 31/229 (13%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQ--CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           Y   V   ++     A +YFN     R  P      K+    A V Y+ G Y  A    +
Sbjct: 426 YYYGVELFRDNQLKAAKDYFNSSLAERLDP--EFTAKATYWKAEVDYALGNYDMALIGYK 483

Query: 119 EYI---------TQYPESKNVDYVY-----YLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           E+            Y    N+ Y Y     Y   +S+ +    +    +        +  
Sbjct: 484 EFKGMPMAKQLSEFYSTDYNIAYAYFKIKNYRSTISFFESFIAIERPSQRLHDAYVRLGD 543

Query: 165 ----IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY---YLKRGEYVAAIPRFQLVL 217
               + + +        A       +N  +        Y   ++ R      I    L +
Sbjct: 544 AQFALGQYWP----AMEAYNSAIAMKNYNSDYAFFQKAYSYGFVDRNAQK--IENLNLFV 597

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
            +Y  + + ++A+  L   YVA      A      I   Y Q  +    
Sbjct: 598 QSYPKSIYKDDALFELGNTYVAENEDQAAITTYQNILTNYKQSIYYPKA 646



 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 75/219 (34%), Gaps = 44/219 (20%)

Query: 61  YEKAVLFLKEQNFSKAYEY-FNQCSRDFPFAGVARKSLLMSA--FVQYSAGKYQQAASLG 117
           Y ++ +  K  NF KA +    +     P +    +S L        ++   Y  A    
Sbjct: 209 YFQSDMNFKLGNFQKAIDLGMEKL----PKSNTRERSQLNKIIGESYFNLKDYTSAI--- 261

Query: 118 EEYITQYPESK----NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
            +Y+  Y   +    N DY  Y +G +Y Q            +L +   S          
Sbjct: 262 -QYLKDYKGDRGKWNNTDY--YQLGYAYYQT--------GQYELAIDEFS---------- 300

Query: 174 YVKGARFYVTVGRNQLAAKEV-EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA-MA 231
                   +  G++ +A      + + YLK  + + A+  F+ V     D +  E+A + 
Sbjct: 301 -------KILDGQDFVAQNAYYHLAKAYLKTDKKIQALNAFKNVTEMNFDDKLKEDAYLN 353

Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
               +Y          EV+    E YP    +  ++ L+
Sbjct: 354 YAKLSYEIGNTYQSVPEVLQAFIENYPTSQESDLIKDLL 392



 Score = 42.0 bits (98), Expect = 0.091,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 59/190 (31%), Gaps = 39/190 (20%)

Query: 64  AVLFLKEQNFSKAYEYFNQCS-RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG----- 117
              +   ++++ A +Y                       +  Y  G+Y+ A         
Sbjct: 248 GESYFNLKDYTSAIQYLKDYKGDR---GKWNNTDYYQLGYAYYQTGQYELAIDEFSKILD 304

Query: 118 -EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            ++++ Q          YY +  +Y +  + +          L     + E   +    +
Sbjct: 305 GQDFVAQN--------AYYHLAKAYLKTDKKI--------QALNAFKNVTEMNFDDKLKE 348

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
            A  Y+       A    EIG        Y +     Q  + NY  ++ ++     L+++
Sbjct: 349 DA--YLNY-----AKLSYEIG------NTYQSVPEVLQAFIENYPTSQESDLIKDLLIDS 395

Query: 237 YVALALMDEA 246
           Y+     ++A
Sbjct: 396 YLTSKNYEKA 405



 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 27/214 (12%), Positives = 69/214 (32%), Gaps = 23/214 (10%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           +  ++S +    +  +   A ++L E+N+ +A    N+   +  F+     +        
Sbjct: 779 EEVINSRSSEFTEESLRRLAQIYLSEKNYDQAITSLNRLETEANFSQNVVFAQSNLMKAY 838

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y    + +     E                  + +S   +  +V  D +   +    +  
Sbjct: 839 YEIENFDRTVIYAE------------------LILSKDNIDEEVLSDAK-IFIARASLEV 879

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
             E+   + Y + +       +   A        +  K   Y A+    Q +  NYS   
Sbjct: 880 GDEKRAETAYREVSTTATGKLK---AEALYYDAYFKNKSQNYEASTLVIQDLTKNYSRYR 936

Query: 225 HA-EEAMARLVEAYVALALMDEAREVVSLIQERY 257
               + +  + + + AL    +A  ++  I + +
Sbjct: 937 EFGVKGLLLMAKNFNALGDDYQATYILENIIKNF 970



 Score = 36.6 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 9/124 (7%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
                 + Y+    + +   +  A + F++      F  VA+ +    A       K  Q
Sbjct: 272 GKWNNTDYYQLGYAYYQTGQYELAIDEFSKILDGQDF--VAQNAYYHLAKAYLKTDKKIQ 329

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A +  +       + K  +  Y    ++YA++  ++    ++   +LQ     +E Y  S
Sbjct: 330 ALNAFKNVTEMNFDDKLKEDAY----LNYAKLSYEIGNTYQSVPEVLQAF---IENYPTS 382

Query: 173 PYVK 176
               
Sbjct: 383 QESD 386


>gi|261855155|ref|YP_003262438.1| tol-pal system protein YbgF [Halothiobacillus neapolitanus c2]
 gi|261835624|gb|ACX95391.1| tol-pal system protein YbgF [Halothiobacillus neapolitanus c2]
          Length = 321

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 43/134 (32%), Gaps = 8/134 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
                  Q+ +Y  A   LK+  + +A   F       P       +L       Y   K
Sbjct: 189 DAAATAKQQALYNAAFAQLKDGQYDQAITGFQAAIDADPQGQWTPSALFWQGETYYVEQK 248

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
             ++ +  ++ +TQ+P S  V       G         + YD    K       +++ +Y
Sbjct: 249 RDKSEAAYQKILTQFPNSDRVPDALLKTG--------YIAYDANKNKQARDIFQQVISKY 300

Query: 170 TNSPYVKGARFYVT 183
             S     A+  + 
Sbjct: 301 PQSQAANLAKQRLA 314



 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 50/148 (33%), Gaps = 34/148 (22%)

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA-QMIRDVPYDQ 152
           +++L  +AF Q   G+Y QA +  +  I   P+ +      +  G +Y  +  RD     
Sbjct: 196 QQALYNAAFAQLKDGQYDQAITGFQAAIDADPQGQWTPSALFWQGETYYVEQKRD----- 250

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
                      +I+ ++ NS  V  A                           Y A   +
Sbjct: 251 ----KSEAAYQKILTQFPNSDRVPDALLKTGYI-------------------AYDANKNK 287

Query: 213 -----FQLVLANYSDAEHAEEAMARLVE 235
                FQ V++ Y  ++ A  A  RL  
Sbjct: 288 QARDIFQQVISKYPQSQAANLAKQRLAR 315



 Score = 40.9 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 48/132 (36%), Gaps = 28/132 (21%)

Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
             Y    +    ++D  YDQ      +      ++      +   A F+           
Sbjct: 198 ALY---NAAFAQLKDGQYDQ-----AITGFQAAIDADPQGQWTPSALFWQGET------- 242

Query: 193 EVEIGRYYL--KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE-AYVALALMDEAREV 249
                 YY+  KR +  AA   +Q +L  + +++   +A+ +    AY A     +AR++
Sbjct: 243 ------YYVEQKRDKSEAA---YQKILTQFPNSDRVPDALLKTGYIAYDA-NKNKQARDI 292

Query: 250 VSLIQERYPQGY 261
              +  +YPQ  
Sbjct: 293 FQQVISKYPQSQ 304



 Score = 35.9 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 2/71 (2%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           LK G+Y  AI  FQ  +      +    A+    E Y      D++      I  ++P  
Sbjct: 207 LKDGQYDQAITGFQAAIDADPQGQWTPSALFWQGETYYVEQKRDKSEAAYQKILTQFPNS 266

Query: 261 YWARYVETLVK 271
              R  + L+K
Sbjct: 267 D--RVPDALLK 275


>gi|317011700|gb|ADU85447.1| competence lipoprotein ComL [Helicobacter pylori SouthAfrica7]
          Length = 220

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 56/147 (38%), Gaps = 4/147 (2%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           N   A  Y++    +   + +  +++L          +Y  A+   +EYI ++    NVD
Sbjct: 52  NLETADNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVD 111

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
           Y+ +L   S+    ++   DQ      +  +   +E+Y NS Y     +     +  L  
Sbjct: 112 YLTFLKLQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYM--QIKFILGQ 169

Query: 192 KEVE--IGRYYLKRGEYVAAIPRFQLV 216
            E+   I   Y KR +        + +
Sbjct: 170 NELNRAIANVYKKRHKPEGVKRYLERI 196


>gi|294341057|emb|CAZ89452.1| putative Tol-Pal system, YbgF protein [Thiomonas sp. 3As]
          Length = 271

 Score = 72.5 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 52/135 (38%), Gaps = 8/135 (5%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           T    ++  +E+A+   +  +F+ +          +P +     +    A  QY+  +Y+
Sbjct: 145 TVQPAEKAAFEQALATFRNGDFAGSATQLKAFLAQYPSSPYDADAQYWLANAQYAQKQYK 204

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            A +  +  I   P +  +     ++G++  Q+      + R      + ++ +V+ Y  
Sbjct: 205 DAIASFQGLIQSSPNNPRLPEA--MLGLANCQI------EVRQIVAARKTLNELVKTYPQ 256

Query: 172 SPYVKGARFYVTVGR 186
           S   +  R  +   R
Sbjct: 257 SEAAQAGRDRLAKLR 271



 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 50/143 (34%), Gaps = 22/143 (15%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           A K+    A   +  G +  +A+  + ++ QYP S       Y +  +           Q
Sbjct: 149 AEKAAFEQALATFRNGDFAGSATQLKAFLAQYPSSPYDADAQYWLANAQYA--------Q 200

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           +  K  +     +++   N+P +  A   +   +              ++  + VAA   
Sbjct: 201 KQYKDAIASFQGLIQSSPNNPRLPEAMLGLANCQ--------------IEVRQIVAARKT 246

Query: 213 FQLVLANYSDAEHAEEAMARLVE 235
              ++  Y  +E A+    RL +
Sbjct: 247 LNELVKTYPQSEAAQAGRDRLAK 269



 Score = 43.6 bits (102), Expect = 0.026,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 45/120 (37%), Gaps = 15/120 (12%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            +       +        Q +   + +Y +SPY   A++++   +               
Sbjct: 154 FEQALATFRNGDFAGSATQ-LKAFLAQYPSSPYDADAQYWLANAQ--------------Y 198

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + +Y  AI  FQ ++ +  +     EAM  L    + +  +  AR+ ++ + + YPQ  
Sbjct: 199 AQKQYKDAIASFQGLIQSSPNNPRLPEAMLGLANCQIEVRQIVAARKTLNELVKTYPQSE 258


>gi|300310548|ref|YP_003774640.1| Tol-Pal cell envelope complex subunit YbgF protein [Herbaspirillum
           seropedicae SmR1]
 gi|300073333|gb|ADJ62732.1| Tol-Pal cell envelope complex subunit YbgF protein [Herbaspirillum
           seropedicae SmR1]
          Length = 251

 Score = 72.5 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 50/131 (38%), Gaps = 8/131 (6%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
            +++ Y+ A+   K  ++  A   F    + +P +G A  +        Y+   Y+ A +
Sbjct: 129 SEQQAYDAALSQFKGGDYKGAANAFADFLKRYPQSGYAPSAQYWQGNSLYAQRDYKGAIA 188

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
             +  +  YP++         +  S A++               + + +++ +Y N+P  
Sbjct: 189 AQQVVVKNYPDNPKAADALLNIASSQAELKDKA--------AAKKTLEQLIAKYPNTPAA 240

Query: 176 KGARFYVTVGR 186
           +  +  +   +
Sbjct: 241 QTGKERMASLK 251



 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 52/142 (36%), Gaps = 22/142 (15%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           + +    +A  Q+  G Y+ AA+   +++ +YP+S       Y  G S           Q
Sbjct: 129 SEQQAYDAALSQFKGGDYKGAANAFADFLKRYPQSGYAPSAQYWQGNSLYA--------Q 180

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           R  K  +     +V+ Y ++P    A   +   + +L  K               AA   
Sbjct: 181 RDYKGAIAAQQVVVKNYPDNPKAADALLNIASSQAELKDK--------------AAAKKT 226

Query: 213 FQLVLANYSDAEHAEEAMARLV 234
            + ++A Y +   A+    R+ 
Sbjct: 227 LEQLIAKYPNTPAAQTGKERMA 248



 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 42/109 (38%), Gaps = 14/109 (12%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K      +  ++RY  S Y   A+++     N L          Y +R  Y  AI  
Sbjct: 144 GDYKGAANAFADFLKRYPQSGYAPSAQYWQG---NSL----------YAQRD-YKGAIAA 189

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            Q+V+ NY D   A +A+  +  +   L     A++ +  +  +YP   
Sbjct: 190 QQVVVKNYPDNPKAADALLNIASSQAELKDKAAAKKTLEQLIAKYPNTP 238



 Score = 38.9 bits (90), Expect = 0.80,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 21/66 (31%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            K G+Y  A   F   L  Y  + +A  A      +  A      A     ++ + YP  
Sbjct: 141 FKGGDYKGAANAFADFLKRYPQSGYAPSAQYWQGNSLYAQRDYKGAIAAQQVVVKNYPDN 200

Query: 261 YWARYV 266
             A   
Sbjct: 201 PKAADA 206


>gi|83718568|ref|YP_441917.1| hypothetical protein BTH_I1371 [Burkholderia thailandensis E264]
 gi|167580761|ref|ZP_02373635.1| hypothetical protein BthaT_21578 [Burkholderia thailandensis TXDOH]
 gi|167618864|ref|ZP_02387495.1| hypothetical protein BthaB_21312 [Burkholderia thailandensis Bt4]
 gi|257138088|ref|ZP_05586350.1| hypothetical protein BthaA_02539 [Burkholderia thailandensis E264]
 gi|83652393|gb|ABC36456.1| conserved hypothetical protein [Burkholderia thailandensis E264]
          Length = 249

 Score = 72.5 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 18/137 (13%), Positives = 45/137 (32%), Gaps = 8/137 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
             T    + + +  A    +  NF  A   F      +P +     +       QY+   
Sbjct: 121 EGTVQPGETDAFNAASQQFRNGNFKGAAASFRAFIAKYPQSPYQPTAQYWLGNAQYALRD 180

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y+ + +  +  +  YP+          +G         +   Q+A     + + ++V ++
Sbjct: 181 YKGSTATWQGLVKNYPQHPRAADALIAIG------TNQLEQGQKAA--AKKTLEQVVSQF 232

Query: 170 TNSPYVKGARFYVTVGR 186
             S   + A+  +   +
Sbjct: 233 PGSNAAETAQSKLDAIK 249



 Score = 52.0 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 47/126 (37%), Gaps = 22/126 (17%)

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           Q+  G ++ AA+    +I +YP+S       Y +G +   +        R  K       
Sbjct: 138 QFRNGNFKGAAASFRAFIAKYPQSPYQPTAQYWLGNAQYAL--------RDYKGSTATWQ 189

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
            +V+ Y   P    A               + IG   L++G+  AA    + V++ +  +
Sbjct: 190 GLVKNYPQHPRAADAL--------------IAIGTNQLEQGQKAAAKKTLEQVVSQFPGS 235

Query: 224 EHAEEA 229
             AE A
Sbjct: 236 NAAETA 241



 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 15/109 (13%), Positives = 37/109 (33%), Gaps = 14/109 (12%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         + +Y  SPY   A++++       A   +          +Y  +   
Sbjct: 142 GNFKGAAASFRAFIAKYPQSPYQPTAQYWLGN-----AQYAL---------RDYKGSTAT 187

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +Q ++ NY     A +A+  +    +       A++ +  +  ++P   
Sbjct: 188 WQGLVKNYPQHPRAADALIAIGTNQLEQGQKAAAKKTLEQVVSQFPGSN 236



 Score = 39.7 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 22/59 (37%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            + G +  A   F+  +A Y  + +   A   L  A  AL     +      + + YPQ
Sbjct: 139 FRNGNFKGAAASFRAFIAKYPQSPYQPTAQYWLGNAQYALRDYKGSTATWQGLVKNYPQ 197


>gi|39996584|ref|NP_952535.1| soluble lytic murein transglycosylase, putative [Geobacter
           sulfurreducens PCA]
 gi|39983465|gb|AAR34858.1| soluble lytic murein transglycosylase, putative [Geobacter
           sulfurreducens PCA]
          Length = 747

 Score = 72.1 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 76/251 (30%), Gaps = 52/251 (20%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++ +A   +    + +A E   +    +P +   RK+ ++ A  Q++  +Y+QA +    
Sbjct: 96  LFWQAEALMAATRYDEAEEVLQRLVGTWPDSPTLRKARMLLADAQFARKEYRQALASYIR 155

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           +I  YP   +         +    +           +  +Q +  I   Y  SP  + A 
Sbjct: 156 FIELYPSGTDSVTANLKTALCREGLDD--------PRRAVQELRAIWLAYPASPVAETAE 207

Query: 180 FYVTV----------------------------------------GRNQLAAK----EVE 195
             +                                           + QLA       ++
Sbjct: 208 QELKRLEALGFPAVPLTPDELLKRGTTLYNLGKYERALAVFNTIPLKEQLAGFNDRVALK 267

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           IG   LK   Y  A   F  ++      E A+EA   L  A       DEA      + E
Sbjct: 268 IGETLLKLRRYKDAARTFSSLIEREPKREIADEARFLLARAQNKAGNDDEAFLGFLKLAE 327

Query: 256 RYPQGYWARYV 266
             P   WA   
Sbjct: 328 TAPTSEWADNA 338



 Score = 52.4 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 72/202 (35%), Gaps = 31/202 (15%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
               LK + +  A   F+      P   +A ++  + A  Q  AG   +A      ++  
Sbjct: 269 GETLLKLRRYKDAARTFSSLIEREPKREIADEARFLLARAQNKAGNDDEAFLG---FLKL 325

Query: 124 ---YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
               P S+  D    L   ++ +  +    DQ      L  + +++  Y  +     A +
Sbjct: 326 AETAPTSEWADNAL-LEA-AFVRKFQGRYADQ------LAVLEKLLTTYPGTKLKPRAMW 377

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
                R                 G+Y +A   F+L+ A+   A++ E A+     +   +
Sbjct: 378 ETAWAR--------------YNTGDYRSAAESFRLLTAS---ADYRERALYWHGRSLQRI 420

Query: 241 ALMDEAREVVSLIQERYPQGYW 262
                AR+  +++ E YP  ++
Sbjct: 421 GEETVARQSFAMLAEEYPFSFY 442



 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 45/133 (33%), Gaps = 17/133 (12%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           + T       + E A +   +  ++       +    +P   +  +++  +A+ +Y+ G 
Sbjct: 329 APTSEWADNALLEAAFVRKFQGRYADQLAVLEKLLTTYPGTKLKPRAMWETAWARYNTGD 388

Query: 110 YQQAASLGEEYITQYPESKNVDY---VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
           Y    S  E +      + + DY     Y  G       R +      T +  Q  + + 
Sbjct: 389 Y---RSAAESFRLL---TASADYRERALYWHG-------RSLQRIGEET-VARQSFAMLA 434

Query: 167 ERYTNSPYVKGAR 179
           E Y  S Y   A 
Sbjct: 435 EEYPFSFYTFTAT 447



 Score = 40.5 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 5/90 (5%)

Query: 50  SVTDVRYQREVYEKAVLFL-----KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           S+ +   +RE+ ++A   L     K  N  +A+  F + +   P +  A  +LL +AFV+
Sbjct: 287 SLIEREPKREIADEARFLLARAQNKAGNDDEAFLGFLKLAETAPTSEWADNALLEAAFVR 346

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVY 134
              G+Y    ++ E+ +T YP +K      
Sbjct: 347 KFQGRYADQLAVLEKLLTTYPGTKLKPRAM 376


>gi|217032410|ref|ZP_03437904.1| hypothetical protein HPB128_164g10 [Helicobacter pylori B128]
 gi|216945889|gb|EEC24507.1| hypothetical protein HPB128_164g10 [Helicobacter pylori B128]
          Length = 207

 Score = 72.1 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 56/147 (38%), Gaps = 4/147 (2%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           N   A  Y++    +   + +  +++L          +Y  A+   +EYI ++    NVD
Sbjct: 39  NLETADNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVD 98

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
           Y+ +L   S+    ++   DQ      +  +   +E+Y NS Y     +     +  L  
Sbjct: 99  YLTFLKLQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYM--QIKFILGQ 156

Query: 192 KEVE--IGRYYLKRGEYVAAIPRFQLV 216
            E+   I   Y KR +        + +
Sbjct: 157 NELNRAIANVYKKRHKPEGVKRYLERI 183


>gi|226942083|ref|YP_002797157.1| YbgF [Laribacter hongkongensis HLHK9]
 gi|226717010|gb|ACO76148.1| YbgF [Laribacter hongkongensis HLHK9]
          Length = 253

 Score = 72.1 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 18/135 (13%), Positives = 44/135 (32%), Gaps = 8/135 (5%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
             V   +  Y++A+  L++++F KA           P A  A  +         +  ++Q
Sbjct: 127 PTVDPVQAGYDQALGLLRQRDFKKAIPALKSFIDANPQAAQAPDARYWLGVAYNAERQFQ 186

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            A    + +I   P    V            + +     D   +         +++++  
Sbjct: 187 PAIDTYQRFIELSPNHPRVPDA--------MRNLGGCQRDLGDSARAKSTWQALIKKFPK 238

Query: 172 SPYVKGARFYVTVGR 186
           S   + A+  +   +
Sbjct: 239 SEAAQKAKQQLASLK 253



 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 40/116 (34%), Gaps = 14/116 (12%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           QR  K  +  +   ++    +     AR+++ V  N  A              ++  AI 
Sbjct: 145 QRDFKKAIPALKSFIDANPQAAQAPDARYWLGVAYN--AE------------RQFQPAID 190

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
            +Q  +    +     +AM  L      L     A+     + +++P+   A+  +
Sbjct: 191 TYQRFIELSPNHPRVPDAMRNLGGCQRDLGDSARAKSTWQALIKKFPKSEAAQKAK 246


>gi|237752172|ref|ZP_04582652.1| TPR repeat-containing protein [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229376414|gb|EEO26505.1| TPR repeat-containing protein [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 222

 Score = 72.1 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 72/189 (38%), Gaps = 5/189 (2%)

Query: 19  LYKFALTIFFSIAVC-FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           +++      FS+ +  F      +++  + LD +   +     Y+  +  ++  +  KA 
Sbjct: 1   MFRIIKIAIFSLCLALFFSACSSKTNSGLALDEI--NKPADYWYQNMLKEIRNDDLEKAD 58

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
            YF     +   + +  +++L+         +Y  A    +E+  ++  + N+D++ +L 
Sbjct: 59  SYFVSLQSEHLNSPLLSEAMLILGRAHMQEEEYMLAGFYFDEFTKRFGNTDNIDFIRFLK 118

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG-RNQLAAKEVEI 196
             +          DQ+     ++      ++Y  S Y       +     + L   E EI
Sbjct: 119 LQANYFAFSKQFRDQQLLLDSIKDAKEFTQKYPYSRYRPMVDSMLLRLELSNLTLNE-EI 177

Query: 197 GRYYLKRGE 205
            R Y ++ +
Sbjct: 178 ARLYERKKK 186


>gi|283850381|ref|ZP_06367670.1| tol-pal system protein YbgF [Desulfovibrio sp. FW1012B]
 gi|283574407|gb|EFC22378.1| tol-pal system protein YbgF [Desulfovibrio sp. FW1012B]
          Length = 317

 Score = 71.7 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 50/125 (40%), Gaps = 8/125 (6%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
             VY K +     + + +A   F + +R+F  + +   +L  +    +  G +  AA   
Sbjct: 199 DAVYAKGLASFNAKQYQQALGIFQEFARNFKTSPLMPNALFWTGECYFQLGDFANAALSY 258

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           +E + +YP+S       +  G+++ ++                    ++++Y +S +   
Sbjct: 259 QEVVEKYPKSAKHADALFKRGVAFQKL--------GNAGAAKLSFKEVIDKYPDSAFAAR 310

Query: 178 ARFYV 182
           A+  +
Sbjct: 311 AKTMM 315



 Score = 54.4 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 46/138 (33%), Gaps = 22/138 (15%)

Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
             Y  G++            +  +  L         +  SP +  A F+           
Sbjct: 200 AVYAKGLASFNA--------KQYQQALGIFQEFARNFKTSPLMPNALFWTGEC------- 244

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
                  Y + G++  A   +Q V+  Y  +    +A+ +   A+  L     A+     
Sbjct: 245 -------YFQLGDFANAALSYQEVVEKYPKSAKHADALFKRGVAFQKLGNAGAAKLSFKE 297

Query: 253 IQERYPQGYWARYVETLV 270
           + ++YP   +A   +T++
Sbjct: 298 VIDKYPDSAFAARAKTMM 315


>gi|224370137|ref|YP_002604301.1| putative aspartyl/asparaginyl beta-hydroxylase (Aspartate
           beta-hydroxylase) (Peptide-aspartate beta-dioxygenase)
           [Desulfobacterium autotrophicum HRM2]
 gi|223692854|gb|ACN16137.1| putative aspartyl/asparaginyl beta-hydroxylase (Aspartate
           beta-hydroxylase) (Peptide-aspartate beta-dioxygenase)
           [Desulfobacterium autotrophicum HRM2]
          Length = 286

 Score = 71.7 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 51/141 (36%), Gaps = 8/141 (5%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
           V  +   +   ++ +Y  A L L +  F +A + F    + +P +  A  +    A   Y
Sbjct: 154 VDGEKTVEDTSEKGLYSAAKLLLDKGEFEQARKAFEAFLKPYPESDNADNARFWIAESYY 213

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               Y++A    ++ I  YP+   V    +  G ++A +                 +  +
Sbjct: 214 REKWYEKAILEYQKVIENYPKGNKVSAALFKQGYAFANLGEKAN--------ARLILKEL 265

Query: 166 VERYTNSPYVKGARFYVTVGR 186
           ++++  S     A   +   +
Sbjct: 266 IKKFPQSNEAGIAAEKLKSLQ 286



 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 41/122 (33%), Gaps = 14/122 (11%)

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
            D+   +   +     ++ Y  S     AR                I   Y +   Y  A
Sbjct: 176 LDKGEFEQARKAFEAFLKPYPESDNADNAR--------------FWIAESYYREKWYEKA 221

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
           I  +Q V+ NY        A+ +   A+  L     AR ++  + +++PQ   A      
Sbjct: 222 ILEYQKVIENYPKGNKVSAALFKQGYAFANLGEKANARLILKELIKKFPQSNEAGIAAEK 281

Query: 270 VK 271
           +K
Sbjct: 282 LK 283



 Score = 35.5 bits (81), Expect = 7.7,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 31/68 (45%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
               +  L +GE+  A   F+  L  Y ++++A+ A   + E+Y      ++A      +
Sbjct: 169 YSAAKLLLDKGEFEQARKAFEAFLKPYPESDNADNARFWIAESYYREKWYEKAILEYQKV 228

Query: 254 QERYPQGY 261
            E YP+G 
Sbjct: 229 IENYPKGN 236


>gi|296136888|ref|YP_003644130.1| tol-pal system protein YbgF [Thiomonas intermedia K12]
 gi|295797010|gb|ADG31800.1| tol-pal system protein YbgF [Thiomonas intermedia K12]
          Length = 271

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 52/135 (38%), Gaps = 8/135 (5%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           T    ++  +E+A+   +  +F+ +          +P +     +    A  QY+  +Y+
Sbjct: 145 TVQPAEKAAFEQALATFRNGDFAGSATQLKAFLAQYPSSPYDADAQYWLANAQYAQKQYK 204

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            A +  +  I   P +  +     ++G++  Q+      + R      + ++ +V+ Y  
Sbjct: 205 DAITTFQGLIQSSPNNPRLPEA--MLGLANCQI------EVRQIVAARKTLNELVKTYPQ 256

Query: 172 SPYVKGARFYVTVGR 186
           S   +  R  +   R
Sbjct: 257 SEAAQAGRDRLAKLR 271



 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 50/143 (34%), Gaps = 22/143 (15%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           A K+    A   +  G +  +A+  + ++ QYP S       Y +  +           Q
Sbjct: 149 AEKAAFEQALATFRNGDFAGSATQLKAFLAQYPSSPYDADAQYWLANAQYA--------Q 200

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           +  K  +     +++   N+P +  A   +   +              ++  + VAA   
Sbjct: 201 KQYKDAITTFQGLIQSSPNNPRLPEAMLGLANCQ--------------IEVRQIVAARKT 246

Query: 213 FQLVLANYSDAEHAEEAMARLVE 235
              ++  Y  +E A+    RL +
Sbjct: 247 LNELVKTYPQSEAAQAGRDRLAK 269



 Score = 43.6 bits (102), Expect = 0.028,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 45/120 (37%), Gaps = 15/120 (12%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            +       +        Q +   + +Y +SPY   A++++   +               
Sbjct: 154 FEQALATFRNGDFAGSATQ-LKAFLAQYPSSPYDADAQYWLANAQ--------------Y 198

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + +Y  AI  FQ ++ +  +     EAM  L    + +  +  AR+ ++ + + YPQ  
Sbjct: 199 AQKQYKDAITTFQGLIQSSPNNPRLPEAMLGLANCQIEVRQIVAARKTLNELVKTYPQSE 258


>gi|284036952|ref|YP_003386882.1| hypothetical protein Slin_2038 [Spirosoma linguale DSM 74]
 gi|283816245|gb|ADB38083.1| TPR repeat-containing protein [Spirosoma linguale DSM 74]
          Length = 1024

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 74/216 (34%), Gaps = 33/216 (15%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA------RKSLLMSAFVQY 105
            D    + +Y     +  ++++++A  YF          G A      + + +  A   +
Sbjct: 524 ADSYATKSLYGLGYAYFNKKDYTRALPYFRDFVSR---GGDADDRVQVQDATIRLADTYF 580

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
           +  +Y+ A    ++ I Q   + + DY  Y   +  + + RD                ++
Sbjct: 581 ATKQYENALRSYDQAIAQN--APDKDYASYQKALILSYVGRDA--------EAKAQFDQV 630

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
             +Y NS +V  +                +      ++G Y  AI  F  ++ +  ++  
Sbjct: 631 QRQYPNSRFVDESL--------------FQKANVDFEKGSYQVAIQGFTKLIQDKPNSAL 676

Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
              A+ +   AY  L   D A      I + Y +  
Sbjct: 677 IPAALLKRAIAYGNLQQYDPAVADYKRILDNYGESD 712



 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 76/209 (36%), Gaps = 23/209 (11%)

Query: 45  DVYLDSVTDVRYQRE-VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           D       + R+  E +++KA +  ++ ++  A + F +  +D P + +   +LL  A  
Sbjct: 628 DQVQRQYPNSRFVDESLFQKANVDFEKGSYQVAIQGFTKLIQDKPNSALIPAALLKRAIA 687

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
             +  +Y  A +  +  +  Y ES        L+G      I++   D    +   Q + 
Sbjct: 688 YGNLQQYDPAVADYKRILDNYGESDQAQSA--LLG------IQNTLNDAGRPEEFSQVLG 739

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
           +  +    S  V+  +               E  R     G+Y  AI  F   +  Y  +
Sbjct: 740 QYKKGNPGSTDVERVQ--------------FENARNIYASGKYEQAIQSFLNFMQEYPAS 785

Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSL 252
            +  +A   + E+Y     +  A    +L
Sbjct: 786 PNTNQARYYVAESYRQTNDVANALRYYNL 814



 Score = 49.3 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 86/242 (35%), Gaps = 36/242 (14%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           +   +  A L L + N + A +      + +P +    ++  +     +++  Y  A + 
Sbjct: 380 EEARFNHAKLQLDQNNGADAVKELTAFLKQYPDSKFENEANELVGEAYFASNNYPAAIAY 439

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT--NS-- 172
            E        +  ++   Y   ++Y Q I D        +  +    + ++ Y   NS  
Sbjct: 440 IEGLKR---RTPKIN-ATYQR-LTYNQGINDFN--AERYQQAVANFDKSLK-YPVENSLQ 491

Query: 173 ---------------PYVKGARFYVTVGR----NQLAAKEVEIGRY-YLKRGEYVAAIPR 212
                           Y      Y ++ +    +  A K +    Y Y  + +Y  A+P 
Sbjct: 492 QAAQFWKAESYSAGKQYDTAIPLYASISKAGGADSYATKSLYGLGYAYFNKKDYTRALPY 551

Query: 213 FQLVLANYSDAE---HAEEAMARLVEAYVALALMDEA-REVVSLIQERYPQGYWARYVET 268
           F+  ++   DA+     ++A  RL + Y A    + A R     I +  P   +A Y + 
Sbjct: 552 FRDFVSRGGDADDRVQVQDATIRLADTYFATKQYENALRSYDQAIAQNAPDKDYASYQKA 611

Query: 269 LV 270
           L+
Sbjct: 612 LI 613



 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 41/126 (32%), Gaps = 14/126 (11%)

Query: 45  DVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS--LLMSA 101
           D ++ + +      ++Y      +   Q+++KA ++  +  R        ++S      A
Sbjct: 116 DRFVKNNSQHPKAGQLYGDLGTYYYNRQDYTKAIDFLEKAVRQ--GGSSTQQSGYKYQLA 173

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
              Y+    Q+A  L  E I   P S +     Y  G    +         +     +  
Sbjct: 174 LSYYNTQNLQKALPLLNE-IKVDPNSTDAPAASYYAGTINFRN--------KNFNEAVAD 224

Query: 162 MSRIVE 167
             RI  
Sbjct: 225 FRRIEN 230


>gi|124266541|ref|YP_001020545.1| putative transmembrane protein [Methylibium petroleiphilum PM1]
 gi|124259316|gb|ABM94310.1| putative transmembrane protein [Methylibium petroleiphilum PM1]
          Length = 263

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 49/133 (36%), Gaps = 8/133 (6%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
              +  +Y +AV  L++ +F+ A   F+   R +P +G +  +L   A  QY    Y+ A
Sbjct: 139 EPEETRLYGEAVNVLRQGDFAGAVNAFSAFQRRYPSSGYSTAALYWLANAQYGKRDYKDA 198

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
                  +   P+          +     ++        + TK   + +  +++ Y  S 
Sbjct: 199 IPSFRALVAAAPDHPRAPEALLSIANCQLEL--------KDTKSARRTLDELLKNYPKSE 250

Query: 174 YVKGARFYVTVGR 186
             +  R  +   +
Sbjct: 251 AAQAGRERLASLK 263



 Score = 54.0 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 41/110 (37%), Gaps = 14/110 (12%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           Q      +   S    RY +S Y   A +++   +             Y KR  Y  AIP
Sbjct: 155 QGDFAGAVNAFSAFQRRYPSSGYSTAALYWLANAQ-------------YGKRD-YKDAIP 200

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            F+ ++A   D   A EA+  +    + L     AR  +  + + YP+  
Sbjct: 201 SFRALVAAAPDHPRAPEALLSIANCQLELKDTKSARRTLDELLKNYPKSE 250



 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 37/129 (28%), Gaps = 22/129 (17%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
             G +  A +    +  +YP S       Y +  +            R  K  +     +
Sbjct: 154 RQGDFAGAVNAFSAFQRRYPSSGYSTAALYWLANAQYGK--------RDYKDAIPSFRAL 205

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           V    + P    A   +   +              L+  +  +A      +L NY  +E 
Sbjct: 206 VAAAPDHPRAPEALLSIANCQ--------------LELKDTKSARRTLDELLKNYPKSEA 251

Query: 226 AEEAMARLV 234
           A+    RL 
Sbjct: 252 AQAGRERLA 260


>gi|34558261|ref|NP_908076.1| TPR repeat-containing protein [Wolinella succinogenes DSM 1740]
 gi|34483980|emb|CAE10976.1| conserved hypothetical protein-TPR repeat containing protein
           [Wolinella succinogenes]
          Length = 217

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 76/202 (37%), Gaps = 17/202 (8%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G  ++S      +   D       Y++ +  ++  +  KA + F     +   + +  ++
Sbjct: 19  GCSQKSDEAKEYNKPADYW-----YQRMLREIRASDLEKADDMFASLQSEHINSPLVPEA 73

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
           +L+         +Y  A    EEY+ ++  S+N D++ YL   +          +Q+   
Sbjct: 74  MLILGRAHMDDREYVLAEFYFEEYLKRFGTSENADFIGYLKLQANFFAFSRETLNQQLLL 133

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV--EIGRYYLKRGEYVAAIP--- 211
             +  +   +++Y  S Y   A   +      LA   +  EI R Y  +G+  AA     
Sbjct: 134 DSIDEVEEYIKKYPYSRYKPYADTMLLKL--HLANLHLNKEIARIYTIQGKEEAAENYRE 191

Query: 212 RF-----QLVLANYSDAEHAEE 228
           RF     + +++   D     +
Sbjct: 192 RFKHHWLKEIVSKEPDMPWYRQ 213


>gi|187735116|ref|YP_001877228.1| Tetratricopeptide TPR_2 repeat protein [Akkermansia muciniphila
           ATCC BAA-835]
 gi|187425168|gb|ACD04447.1| Tetratricopeptide TPR_2 repeat protein [Akkermansia muciniphila
           ATCC BAA-835]
          Length = 316

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 87/262 (33%), Gaps = 49/262 (18%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE---VYEKAVLFLKEQNFSKAYEYFNQ 82
           +F  +A         Q S +      T     ++   + ++A     + + S A + + +
Sbjct: 6   LFLMMAAVSGALALCQCSSEAPPPPGTVRMVDQQAIALMQEARAKEAKNDLSGAIKKYRR 65

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
                P +  A  +    A +  +  +  +A    ++ I ++P+S       Y   MS  
Sbjct: 66  VVEKHPLSREAPLARFRMAELYEARKEPAEAFDQYQKLIDRHPDSP-----LYRQAMSRQ 120

Query: 143 QMIR----------------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
           + +                 DV  D       L+++        N+PY   A   + V  
Sbjct: 121 KEMAFGAASGALTNRVLWMFDVRMDPTNVTEWLKHVRD------NAPYAPTAPQAMNVLG 174

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM--- 243
           N LAA           RG    AI  +Q ++ NY ++  A  A  ++   Y   A     
Sbjct: 175 NYLAA-----------RGRMKEAIEAYQNLVDNYPNSPLAPTAQLQIATLYRQAAADGDR 223

Query: 244 -----DEAREVVSLIQERYPQG 260
                  A+E      +RYP  
Sbjct: 224 NHVNVARAQEAYEDYLQRYPNS 245



 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 58/142 (40%), Gaps = 5/142 (3%)

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSA--GKYQQAASLGEEYITQYPESKNVDYVYY 135
           E+      + P+A  A +++ +     Y A  G+ ++A    +  +  YP S        
Sbjct: 151 EWLKHVRDNAPYAPTAPQAMNVLG--NYLAARGRMKEAIEAYQNLVDNYPNSPLAPTAQL 208

Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
            +   Y Q   D   +        +     ++RY NS     AR  +   + +L A+++E
Sbjct: 209 QIATLYRQAAADGDRNHVNVARAQEAYEDYLQRYPNSARAGAARADLAAMKRELVAQQLE 268

Query: 196 IGRYYL-KRGEYVAAIPRFQLV 216
           +  YYL K  +  AA+  +Q V
Sbjct: 269 VAEYYLTKMKDADAAVFCYQEV 290



 Score = 40.5 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 12/91 (13%)

Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
           + A   +   R + A  ++              AI +++ V+  +  +  A  A  R+ E
Sbjct: 38  QQAIALMQEARAKEAKNDLS------------GAIKKYRRVVEKHPLSREAPLARFRMAE 85

Query: 236 AYVALALMDEAREVVSLIQERYPQGYWARYV 266
            Y A     EA +    + +R+P     R  
Sbjct: 86  LYEARKEPAEAFDQYQKLIDRHPDSPLYRQA 116


>gi|254490143|ref|ZP_05103334.1| tol-pal system protein YbgF, putative [Methylophaga thiooxidans
           DMS010]
 gi|224464629|gb|EEF80887.1| tol-pal system protein YbgF, putative [Methylophaga thiooxydans
           DMS010]
          Length = 271

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 50/131 (38%), Gaps = 8/131 (6%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
              Y+ A+  L+   + +A          +P +     +       +Y   ++  AA+L 
Sbjct: 147 EAAYQSALQTLRSGQYQEAVTALQAFPEQYPDSIYLPNAYYWQGEAKYVLREFPDAAALF 206

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           +  I QYP S  V       G +  +M          T+  +  +++++++Y +S   K 
Sbjct: 207 QIVIDQYPASTKVADALLKRGFTEDEM--------GDTQRAIATLNQVIDQYPDSSAAKL 258

Query: 178 ARFYVTVGRNQ 188
           A+  +     Q
Sbjct: 259 AKVRLDRINQQ 269



 Score = 51.3 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 46/128 (35%), Gaps = 22/128 (17%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
            +G+YQ+A +  + +  QYP+S  +   YY  G +   +                    +
Sbjct: 158 RSGQYQEAVTALQAFPEQYPDSIYLPNAYYWQGEAKYVLREFPD--------AAALFQIV 209

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           +++Y  S  V  A        +++              G+   AI     V+  Y D+  
Sbjct: 210 IDQYPASTKVADALLKRGFTEDEM--------------GDTQRAIATLNQVIDQYPDSSA 255

Query: 226 AEEAMARL 233
           A+ A  RL
Sbjct: 256 AKLAKVRL 263



 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 42/112 (37%), Gaps = 14/112 (12%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           +  +  +    E+Y +S Y+  A ++    +             Y+ R    AA   FQ+
Sbjct: 163 QEAVTALQAFPEQYPDSIYLPNAYYWQGEAK-------------YVLREFPDAAAL-FQI 208

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
           V+  Y  +    +A+ +       +     A   ++ + ++YP    A+  +
Sbjct: 209 VIDQYPASTKVADALLKRGFTEDEMGDTQRAIATLNQVIDQYPDSSAAKLAK 260


>gi|171915546|ref|ZP_02931016.1| hypothetical protein VspiD_30275 [Verrucomicrobium spinosum DSM
           4136]
          Length = 986

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 20/180 (11%), Positives = 65/180 (36%), Gaps = 8/180 (4%)

Query: 7   RAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVL 66
           R + ++     ++     +   ++A    V   +++ ++               Y +  +
Sbjct: 360 RLMALYPEAKTEVEAAMFSNVVALADLLQVKTCQKACQEYLQAFPKGANAGTVAYIQGAV 419

Query: 67  FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
            ++     +A   F     + P      +  +M     +S G+  +A  + + YI ++P+
Sbjct: 420 AMQAGELREAANLFGVLVENQPNGTFTEQMYMMQGSAYFSLGELAEALRVYKRYIAKFPK 479

Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
             + +   Y   +        +P      +   + +   ++ +  S YV+ A++ + + +
Sbjct: 480 GASFEEAQYRAAI--------IPVFMGKFEEGWKLVEAFIKAHPRSQYVEDAKYRLMICK 531



 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/72 (13%), Positives = 24/72 (33%), Gaps = 3/72 (4%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
              R+    +          ++ K+ + F     D+P    +  + L  A   +    Y+
Sbjct: 89  PRKRFAPVFFTLGAAAFNLPDYPKSIKAFETFLTDWPTHEKSFDARLALARACFRNKDYE 148

Query: 112 QAA---SLGEEY 120
           +A    +  E +
Sbjct: 149 KALGLFAELERF 160


>gi|285019181|ref|YP_003376892.1| hypothetical protein XALc_2421 [Xanthomonas albilineans GPE PC73]
 gi|283474399|emb|CBA16900.1| hypothetical protein XALc_2421 [Xanthomonas albilineans]
          Length = 256

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 43/126 (34%), Gaps = 8/126 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A   LK   ++ +   F    + +P    A  +L       Y+   +  A S   + 
Sbjct: 133 YNLAFDALKAGKYADSANLFQSFLQKYPNGVYAPNALYWLGESYYATKNFDLAESQFRDL 192

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           I +YP           +G+S     R         +   Q + +++ +Y  S   + A+ 
Sbjct: 193 IGRYPTHDKAAGAMLKLGLSQYGEGR--------VQEAEQTLQQVIGKYPGSDAARTAQD 244

Query: 181 YVTVGR 186
            +   R
Sbjct: 245 RLQSIR 250



 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 46/140 (32%), Gaps = 22/140 (15%)

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
            ++    AF    AGKY  +A+L + ++ +YP         Y +G SY           +
Sbjct: 129 ERTSYNLAFDALKAGKYADSANLFQSFLQKYPNGVYAPNALYWLGESYYAT--------K 180

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
              L       ++ RY       GA   + + +                 G    A    
Sbjct: 181 NFDLAESQFRDLIGRYPTHDKAAGAMLKLGLSQ--------------YGEGRVQEAEQTL 226

Query: 214 QLVLANYSDAEHAEEAMARL 233
           Q V+  Y  ++ A  A  RL
Sbjct: 227 QQVIGKYPGSDAARTAQDRL 246



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 41/115 (35%), Gaps = 14/115 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                    +++Y N  Y   A +++              G  Y     +  A  +F+ +
Sbjct: 147 DSANLFQSFLQKYPNGVYAPNALYWL--------------GESYYATKNFDLAESQFRDL 192

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           +  Y   + A  AM +L  +      + EA + +  +  +YP    AR  +  ++
Sbjct: 193 IGRYPTHDKAAGAMLKLGLSQYGEGRVQEAEQTLQQVIGKYPGSDAARTAQDRLQ 247



 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 29/80 (36%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
              V     +Y     +   +NF  A   F      +P    A  ++L     QY  G+ 
Sbjct: 160 PNGVYAPNALYWLGESYYATKNFDLAESQFRDLIGRYPTHDKAAGAMLKLGLSQYGEGRV 219

Query: 111 QQAASLGEEYITQYPESKNV 130
           Q+A    ++ I +YP S   
Sbjct: 220 QEAEQTLQQVIGKYPGSDAA 239



 Score = 44.0 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 26/58 (44%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           LK G+Y  +   FQ  L  Y +  +A  A+  L E+Y A    D A      +  RYP
Sbjct: 140 LKAGKYADSANLFQSFLQKYPNGVYAPNALYWLGESYYATKNFDLAESQFRDLIGRYP 197


>gi|78224725|ref|YP_386472.1| TPR repeat-containing protein [Geobacter metallireducens GS-15]
 gi|78195980|gb|ABB33747.1| TPR repeat protein [Geobacter metallireducens GS-15]
          Length = 271

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 51/142 (35%), Gaps = 8/142 (5%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           +       +      +Y+K +   +  NF+ A E F +     P   +A  +   S    
Sbjct: 138 ETAQAKPPEPATPEALYQKGLDAYRSGNFAAARESFARFLEQHPKHELAVNAHYWSGEAY 197

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y   KY+QA    +E I  +P  + V     L        I DV       K     + +
Sbjct: 198 YGEKKYEQAILEFQEVIKNFPGKEKVPAAM-LKQAGAFNEIGDV-------KSARYVLRK 249

Query: 165 IVERYTNSPYVKGARFYVTVGR 186
           +++ + ++   + A+  +   +
Sbjct: 250 LIDEHPSTEEARRAKERLKALK 271



 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 46/147 (31%), Gaps = 22/147 (14%)

Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
           P         Y  G+   +                +  +R +E++        A      
Sbjct: 144 PPEPATPEALYQKGLDAYRS--------GNFAAARESFARFLEQHPKHELAVNA------ 189

Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
                       G  Y    +Y  AI  FQ V+ N+   E    AM +   A+  +  + 
Sbjct: 190 --------HYWSGEAYYGEKKYEQAILEFQEVIKNFPGKEKVPAAMLKQAGAFNEIGDVK 241

Query: 245 EAREVVSLIQERYPQGYWARYVETLVK 271
            AR V+  + + +P    AR  +  +K
Sbjct: 242 SARYVLRKLIDEHPSTEEARRAKERLK 268


>gi|312129683|ref|YP_003997023.1| tetratricopeptide tpr_1 repeat-containing protein [Leadbetterella
           byssophila DSM 17132]
 gi|311906229|gb|ADQ16670.1| Tetratricopeptide TPR_1 repeat-containing protein [Leadbetterella
           byssophila DSM 17132]
          Length = 996

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 49/251 (19%), Positives = 91/251 (36%), Gaps = 33/251 (13%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE--VYEKAVLFLKEQNFSKAYEYFNQCSR 85
             I  CFL+      +  VY D+       ++  +Y+K +        ++A   F+Q SR
Sbjct: 547 LRIGDCFLMAKNFSQALQVYDDAFKGNTSGKDYALYQKGMALRYLGRENEAKNTFDQFSR 606

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
            FP + +  + L  +  +   AG Y  A +     + +   S+   +V    G++Y+ + 
Sbjct: 607 TFPNSRLLDEVLFQNGNLAMEAGNYNGAINTFSNILKRQTNSELTAHVLLRRGIAYSNVE 666

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE--VEIGRYYLKR 203
           +            +    +I+ ++  S Y   A   +    +Q    E   EI   Y K 
Sbjct: 667 K--------YDNAISDFKQILNKFGKSKYASEAFLGIREALSQANRSEEFFEIAEVYKKN 718

Query: 204 ---------------------GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
                                 +Y AAI  F   ++ Y  + +  EA   + E+Y+ L  
Sbjct: 719 NPEGSSVQGLQFETAKDLFFAEKYDAAISAFTKFISQYPGSVYTPEANYLIGESYLGLKK 778

Query: 243 MDEAREVVSLI 253
             EA +    I
Sbjct: 779 TTEALKYYQTI 789



 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 62/213 (29%), Gaps = 34/213 (15%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSR--DFPFAGVARK-----SLLMSAFVQYSAGKYQQA 113
           Y    +    + +S A  +F              + +     + L        A  + QA
Sbjct: 506 YALGYMSFNNERYSDALRFFQDFKSGGR---GEASLQTSLDDANLRIGDCFLMAKNFSQA 562

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
             + ++        K  DY  Y  GM+   + R+                +    + NS 
Sbjct: 563 LQVYDDAFKGNTSGK--DYALYQKGMALRYLGRE--------NEAKNTFDQFSRTFPNSR 612

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
            +                   + G   ++ G Y  AI  F  +L   +++E     + R 
Sbjct: 613 LLDEVL--------------FQNGNLAMEAGNYNGAINTFSNILKRQTNSELTAHVLLRR 658

Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
             AY  +   D A      I  ++ +  +A   
Sbjct: 659 GIAYSNVEKYDNAISDFKQILNKFGKSKYASEA 691



 Score = 41.3 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 48/286 (16%), Positives = 90/286 (31%), Gaps = 60/286 (20%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS---RDFPFAGVARKSLL 98
           S     L+     +Y  E +      L + N S+  E+F       ++ P     +    
Sbjct: 673 SDFKQILNKFGKSKYASEAFLGIREALSQANRSE--EFFEIAEVYKKNNPEGSSVQGLQF 730

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG------------MSYAQMI- 145
            +A   + A KY  A S   ++I+QYP S       YL+G            + Y Q I 
Sbjct: 731 ETAKDLFFAEKYDAAISAFTKFISQYPGSVYTPEANYLIGESYLGLKKTTEALKYYQTIV 790

Query: 146 ---------------RDVPYDQRATKLMLQYMSRIV-------------ERYTNSPYVKG 177
                            + ++++  +   +  +++V             E +  S Y   
Sbjct: 791 NEGQLEYLSQAASRSAGIYFEKKQFEEAARNYNQVVNTTSDQREMIVAYEGWMKSQYELK 850

Query: 178 ARFYVTVGRNQL----------AAK--EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
                     ++          A    E+  G+ Y+    + +A  +F+  +    D   
Sbjct: 851 KYDQTLELAEKILTTGPEVVVGAKNRAELYKGKAYMGMSNWASAKIQFEKTIELGKDVSA 910

Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQG-YWARYVETLV 270
           A EA  RL E        D + + +  +   Y     W      L+
Sbjct: 911 A-EAKYRLGEIQYKQKEYDASIKTMQELASNYSDFLEWYENAFLLI 955



 Score = 37.8 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 67/219 (30%), Gaps = 41/219 (18%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFN----QCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D  YQ+  Y + V       F+ A +YF+    + S       +A ++ L  A   Y   
Sbjct: 425 DEAYQKLAYSQGVQEYNSGRFANAIQYFDKSLVKVSSR----DLAVQAKLWKAESLYQQD 480

Query: 109 KYQQAASLGEEYITQYPESKNVD-----YVY-YLVGMSYAQMIRDVPYDQRATKLMLQYM 162
           + Q A +L  E +T    S  +      Y   Y+             ++       L++ 
Sbjct: 481 QIQAAEALYRELLT---SSDKIARLKSQYALGYM------------SFNNERYSDALRFF 525

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
                    S     A       +  L    + IG  +L    +  A+  +        +
Sbjct: 526 QDF-----KSGGRGEAS-----LQTSLDDANLRIGDCFLMAKNFSQALQVYDDAFKG--N 573

Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
               + A+ +   A   L   +EA+         +P   
Sbjct: 574 TSGKDYALYQKGMALRYLGRENEAKNTFDQFSRTFPNSR 612



 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 55/171 (32%), Gaps = 36/171 (21%)

Query: 89  FAGVARKSL-LMSAFVQYSAG-------KYQQAASLGEEYITQ-----YPESKNVDYVYY 135
           F+  ++ +L   S    Y+ G        Y  A    + YI+       P   N+    Y
Sbjct: 13  FSAYSQNTLSYSSIESHYNNGVELFGKKAYSSARKEFQNYISLSAKSLNPNKFNLANAEY 72

Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
              MS                     + R V  + + P     +  +      LA +   
Sbjct: 73  YSAMSSLY---------SKALDADIEVERFVLNHGDHP-----KAKIIYA--DLAQR--- 113

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
               Y +RGEY  AI  ++  L+N +D     E   +L  +Y  L     A
Sbjct: 114 ----YYERGEYKDAIRYYEKALSNRADNLDTYEIRYQLGVSYYQLGDFQNA 160


>gi|30248244|ref|NP_840314.1| TPR repeat-containing protein [Nitrosomonas europaea ATCC 19718]
 gi|30180129|emb|CAD84131.1| TPR repeat [Nitrosomonas europaea ATCC 19718]
          Length = 275

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 45/126 (35%), Gaps = 8/126 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A   +K  ++S A   F      +P + +A  +        Y+   + +A +  +  
Sbjct: 158 YDAAYASIKSGDYSGAVTGFESFLAQYPQSALAPSAAYWVGNAYYALRDFDKAITAQQRL 217

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           I  YP S  V       G+      +     Q+A     + + +++  Y  +     A+ 
Sbjct: 218 IEIYPGSPKVAD-----GLLNMASSQ-AEMGQKAA--ARKTLEKLIASYPGTEAATKAKQ 269

Query: 181 YVTVGR 186
            +   +
Sbjct: 270 RLGTLK 275



 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 55/141 (39%), Gaps = 22/141 (15%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           A+++   +A+    +G Y  A +  E ++ QYP+S       Y VG +Y  +        
Sbjct: 153 AQRNRYDAAYASIKSGDYSGAVTGFESFLAQYPQSALAPSAAYWVGNAYYAL-------- 204

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           R     +    R++E Y  SP V      +   + ++  K               AA   
Sbjct: 205 RDFDKAITAQQRLIEIYPGSPKVADGLLNMASSQAEMGQK--------------AAARKT 250

Query: 213 FQLVLANYSDAEHAEEAMARL 233
            + ++A+Y   E A +A  RL
Sbjct: 251 LEKLIASYPGTEAATKAKQRL 271



 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 34/110 (30%), Gaps = 14/110 (12%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
            +      + +Y  S     A ++              +G  Y    ++  AI   Q ++
Sbjct: 173 AVTGFESFLAQYPQSALAPSAAYW--------------VGNAYYALRDFDKAITAQQRLI 218

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
             Y  +    + +  +  +   +     AR+ +  +   YP    A   +
Sbjct: 219 EIYPGSPKVADGLLNMASSQAEMGQKAAARKTLEKLIASYPGTEAATKAK 268



 Score = 40.1 bits (93), Expect = 0.31,   Method: Composition-based stats.
 Identities = 19/61 (31%), Positives = 27/61 (44%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           +K G+Y  A+  F+  LA Y  +  A  A   +  AY AL   D+A      + E YP  
Sbjct: 165 IKSGDYSGAVTGFESFLAQYPQSALAPSAAYWVGNAYYALRDFDKAITAQQRLIEIYPGS 224

Query: 261 Y 261
            
Sbjct: 225 P 225



 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 25/80 (31%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                     Y     +   ++F KA     +    +P +      LL  A  Q   G+ 
Sbjct: 185 PQSALAPSAAYWVGNAYYALRDFDKAITAQQRLIEIYPGSPKVADGLLNMASSQAEMGQK 244

Query: 111 QQAASLGEEYITQYPESKNV 130
             A    E+ I  YP ++  
Sbjct: 245 AAARKTLEKLIASYPGTEAA 264


>gi|85858722|ref|YP_460924.1| tol system periplasmic component [Syntrophus aciditrophicus SB]
 gi|85721813|gb|ABC76756.1| tol system periplasmic component [Syntrophus aciditrophicus SB]
          Length = 280

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 50/163 (30%), Gaps = 9/163 (5%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L  F +I            ++            + + Y  A  F KE  + KA   F   
Sbjct: 127 LETFLAIGDKNGHAAASNGTKAKDNVKAKTTSREDQ-YAAAYSFFKEGKYEKARTEFENY 185

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
            +  P    +  +        Y   KY++A    E+ I  YP+        +  G+ +  
Sbjct: 186 LKANPKTSYSDNAQFWIGETYYFEKKYEKAILEYEKVIKNYPDGNRAANALFKQGLCFLM 245

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
           +                   ++++ Y N+   + AR  +   +
Sbjct: 246 LEDKAS--------ARLIFQQVIKDYPNTSQARTARAKLLEIK 280



 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 54/141 (38%), Gaps = 26/141 (18%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
              +A+  +  GKY++A +  E Y+   P++   D   + +G +Y          ++  +
Sbjct: 162 QYAAAYSFFKEGKYEKARTEFENYLKANPKTSYSDNAQFWIGETYYF--------EKKYE 213

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR--FQ 214
             +    ++++ Y +      A F   +    L  K                A  R  FQ
Sbjct: 214 KAILEYEKVIKNYPDGNRAANALFKQGLCFLMLEDK----------------ASARLIFQ 257

Query: 215 LVLANYSDAEHAEEAMARLVE 235
            V+ +Y +   A  A A+L+E
Sbjct: 258 QVIKDYPNTSQARTARAKLLE 278



 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 37/109 (33%), Gaps = 14/109 (12%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           +         ++    + Y   A+                IG  Y    +Y  AI  ++ 
Sbjct: 176 EKARTEFENYLKANPKTSYSDNAQ--------------FWIGETYYFEKKYEKAILEYEK 221

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
           V+ NY D   A  A+ +    ++ L     AR +   + + YP    AR
Sbjct: 222 VIKNYPDGNRAANALFKQGLCFLMLEDKASARLIFQQVIKDYPNTSQAR 270


>gi|95930002|ref|ZP_01312742.1| Tetratricopeptide TPR_2 [Desulfuromonas acetoxidans DSM 684]
 gi|95133971|gb|EAT15630.1| Tetratricopeptide TPR_2 [Desulfuromonas acetoxidans DSM 684]
          Length = 292

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 54/141 (38%), Gaps = 9/141 (6%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQ-NFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
            +    +         +Y +A+  +++  +F+K+ + F Q  + +P   +A  ++     
Sbjct: 157 DEKPTAASATQDQPDALYHQALQLVQQGSDFTKSRDLFRQFIQSYPQHDLAVNAMYWIGE 216

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y   +Y+ A    ++ I +YP    +       G+++  +           +     +
Sbjct: 217 TLYGDKQYESAILQFQDVIQKYPNHPKMPAALMKQGLAFYAL--------GDVRNAKIIL 268

Query: 163 SRIVERYTNSPYVKGARFYVT 183
            ++V+ Y  +P    A+  + 
Sbjct: 269 QKVVDNYPQTPEADKAQERLK 289



 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 55/181 (30%), Gaps = 37/181 (20%)

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
            VA    L          K   A++  ++               Y   +   Q   D   
Sbjct: 146 PVAPAVQLNQ-----RDEKPTAASATQDQ-----------PDALYHQALQLVQQGSDFT- 188

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
                        + ++ Y        A ++              IG       +Y +AI
Sbjct: 189 ------KSRDLFRQFIQSYPQHDLAVNAMYW--------------IGETLYGDKQYESAI 228

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
            +FQ V+  Y +      A+ +   A+ AL  +  A+ ++  + + YPQ   A   +  +
Sbjct: 229 LQFQDVIQKYPNHPKMPAALMKQGLAFYALGDVRNAKIILQKVVDNYPQTPEADKAQERL 288

Query: 271 K 271
           K
Sbjct: 289 K 289


>gi|301063194|ref|ZP_07203745.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
 gi|300442689|gb|EFK06903.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
          Length = 861

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 47/123 (38%), Gaps = 8/123 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y K +    E+++  A  YF +   +FP   +  ++    A   Y    ++         
Sbjct: 742 YNKGIKAFGEEDYGVARGYFQKVMEEFPQTVIVDQAAYQYAMSYYREKDWKLTIFWLNWL 801

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +  YPE++    VYY +G+ Y          Q  T+    +  + V R+  + +   A+ 
Sbjct: 802 LETYPETRRAAEVYYHMGLCYLN--------QGKTEQARVWFQKTVNRFPGTNWAGFAKD 853

Query: 181 YVT 183
            + 
Sbjct: 854 RLQ 856



 Score = 51.3 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 38/114 (33%), Gaps = 14/114 (12%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
              Y  +++E +  +  V  A +             +     Y +  ++   I     +L
Sbjct: 757 ARGYFQKVMEEFPQTVIVDQAAY----------QYAMS----YYREKDWKLTIFWLNWLL 802

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
             Y +   A E    +   Y+     ++AR        R+P   WA + +  ++
Sbjct: 803 ETYPETRRAAEVYYHMGLCYLNQGKTEQARVWFQKTVNRFPGTNWAGFAKDRLQ 856


>gi|220903667|ref|YP_002478979.1| tol-pal system protein YbgF [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219867966|gb|ACL48301.1| tol-pal system protein YbgF [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 325

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 53/120 (44%), Gaps = 8/120 (6%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +++  V     + + +A   F    +++    +A ++    A   +   ++  AA   ++
Sbjct: 207 LFDAGVNAYNARKYDEAQRSFTDFLKNYKGHNLASEAQFYLAECYFQRNQFADAALSYDK 266

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            I +YP+S +    Y   G+S++++      +Q A       +  ++++Y NSP    A+
Sbjct: 267 VIKEYPKSSSAPGAYLKQGISFSKL------NQSAAAKAR--LEELIKKYPNSPEAARAK 318



 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 40/115 (34%), Gaps = 14/115 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              +  +  ++ Y        A+FY+                 Y +R ++  A   +  V
Sbjct: 222 EAQRSFTDFLKNYKGHNLASEAQFYLAEC--------------YFQRNQFADAALSYDKV 267

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           +  Y  +  A  A  +   ++  L     A+  +  + ++YP    A   +T +K
Sbjct: 268 IKEYPKSSSAPGAYLKQGISFSKLNQSAAAKARLEELIKKYPNSPEAARAKTFLK 322


>gi|253827087|ref|ZP_04869972.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
 gi|253510493|gb|EES89152.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
          Length = 207

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 72/185 (38%), Gaps = 6/185 (3%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
               +++  + LD V   +     Y+  +  ++  +  KA  YF     +   + +  ++
Sbjct: 5   ACSSKNNGGLALDEV--NKPADYWYQNMLKEIRNGDLEKADSYFTSLQSEHLHSPLLSEA 62

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
           +L+         +Y  A    +EY  ++ + +N+D++ +L   +          DQ+  +
Sbjct: 63  MLILGRAHMQEEEYLLAIFYFDEYTKRFGDGQNIDFINFLKLQANYFAFAKQFRDQQLLE 122

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV--EIGRYYLKRGEYVAAIPRFQ 214
             ++      ++Y  S Y       +     +LA   +  EI + Y K+ +  AA    Q
Sbjct: 123 KSIKDAQDFGQKYPYSRYRPIVDTMLLKL--ELANLSLNKEIIKLYDKKDKPQAAEYYQQ 180

Query: 215 LVLAN 219
            +  N
Sbjct: 181 KINEN 185


>gi|296123820|ref|YP_003631598.1| hypothetical protein Plim_3586 [Planctomyces limnophilus DSM 3776]
 gi|296016160|gb|ADG69399.1| Tetratricopeptide TPR_2 repeat protein [Planctomyces limnophilus
           DSM 3776]
          Length = 1077

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 83/240 (34%), Gaps = 25/240 (10%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           K  L     + +  + G++  + +   L            +   V   ++  +  A E F
Sbjct: 22  KARLACSSLLWLAMICGFQSFALQPT-LAQPPANSADLSDFNNGVGLYRQSRWGDAVESF 80

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
            Q  +  P +    +S +       +   Y +A ++  E++  +PE+ NV    Y V   
Sbjct: 81  RQFIKANPQSPRVPESQIYIGLALINQQNYVEARTVLREFLKNFPENSNVAQARYRVAEC 140

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
              ++ D P          Q +   +E+Y        A  Y+   + QL           
Sbjct: 141 SF-LLNDFP-------AAKQELQSYLEKYPQDALAPRALAYLGDVQLQL----------- 181

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ--ERYP 258
               +  AAI  F+     +     A++    L +AY A     E ++++  I   + +P
Sbjct: 182 ---KDPQAAITTFEEARKRFPAGALADDIEYGLAQAYSAAGKTAEGQKLLDAIAARQNHP 238



 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 52/163 (31%), Gaps = 22/163 (13%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y   ++  A     ++I   P+S  V      +G++       V             +  
Sbjct: 68  YRQSRWGDAVESFRQFIKANPQSPRVPESQIYIGLALINQQNYV--------EARTVLRE 119

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
            ++ +  +  V  AR+ V      L               ++ AA    Q  L  Y    
Sbjct: 120 FLKNFPENSNVAQARYRVAECSFLL--------------NDFPAAKQELQSYLEKYPQDA 165

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
            A  A+A L +  + L     A       ++R+P G  A  +E
Sbjct: 166 LAPRALAYLGDVQLQLKDPQAAITTFEEARKRFPAGALADDIE 208



 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/223 (13%), Positives = 73/223 (32%), Gaps = 31/223 (13%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
            + ++Y   +  + +QN+ +A     +  ++FP      ++    A   +    +  A  
Sbjct: 94  PESQIY-IGLALINQQNYVEARTVLREFLKNFPENSNVAQARYRVAECSFLLNDFPAAKQ 152

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
             + Y+ +YP+            ++Y   ++    D +A    +       +R+      
Sbjct: 153 ELQSYLEKYPQDALAP-----RALAYLGDVQLQLKDPQA---AITTFEEARKRFPAGALA 204

Query: 176 KGARFYV-------------TVGRNQLAAKE---------VEIGRYYLKRGEYVAAIPRF 213
               + +                 + +AA++         + +G       +Y  AI +F
Sbjct: 205 DDIEYGLAQAYSAAGKTAEGQKLLDAIAARQNHPHAADALLLLGNQASTAKDYPVAIRQF 264

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           +L+   Y  +  AE A+     A       D A      +  +
Sbjct: 265 ELLAERYPQSPLAETALTNRGYALFQTGQFDAAAAQFEKLAAQ 307



 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/268 (12%), Positives = 84/268 (31%), Gaps = 16/268 (5%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
           AV G+ + +F     +   +AL    + A            +    +   D      + +
Sbjct: 540 AVAGKYLSMFPQATQRRRAYALQ-GLAYAKAQQWAKAEAVIKQFEAEFPGDPAVAAALMD 598

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           +A +    + +  A   F +  R          +   + + ++  G Y+ A    EE+  
Sbjct: 599 QAEVAEAAKQWPVALADFEKLKRLAAGTTNEPFAWRGTGWSRFRLGDYKLA---AEEFAQ 655

Query: 123 Q---YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
               +P+        Y  G S+           + T+  L+   +  +R+         +
Sbjct: 656 LSAKFPQHPLQAEAMYYEGESWLLA--------KETEKALKVFQQAFDRF-TPKDAASVK 706

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             +           + + R   + G    A   ++ +L  +  AE  ++ +         
Sbjct: 707 EELKAPVLFGYRSGLMMARTLEQTGRLEQADQAYETLLKKFPKAEVFDQLLNEWALINYE 766

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVE 267
               ++A ++ + +    P+   A   +
Sbjct: 767 AGRFEQADKIFARLVAECPESPLADNAK 794



 Score = 45.9 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/164 (11%), Positives = 41/164 (25%), Gaps = 46/164 (28%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
                  +++  A   F   +  +P + +A  +L    +  +  G++  AA+   ++   
Sbjct: 248 GNQASTAKDYPVAIRQFELLAERYPQSPLAETALTNRGYALFQTGQFDAAAA---QFEKL 304

Query: 124 -----------YPESK--NVDYVYYLVGMSYAQ--------------------------- 143
                       P+ K     Y  Y  G+S                              
Sbjct: 305 AAQLEKTSSTWTPQQKQQAASY-LYWQGLSQKNGNQLEAALVTFAKSFDLAGGSSIAESV 363

Query: 144 --MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
                        T+       ++VE++        A   V   
Sbjct: 364 LYQQTLTARQLGQTQKAEALALQLVEKWPQGDSADDALLMVIDL 407



 Score = 42.0 bits (98), Expect = 0.087,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 46/130 (35%), Gaps = 16/130 (12%)

Query: 64   AVLFLKEQNFSKAYEYFNQCSRDFPFA---GVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
               + ++  F +A   F   ++D P +    +A K+  + A   +    ++QA    ++ 
Sbjct: 958  GRAYKQQAKFDEARAAFQIVTKD-PQSQQTELAAKAQFLLAETYFLQENWKQAFLEYQKV 1016

Query: 121  ITQY--PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
             + Y  PE +         G+            +   K  +    R++  + N  Y   A
Sbjct: 1017 YSNYAFPEWQAA-------GL---LQAAKCDEQRSQWKEAIATYERLLREFPNVSYATEA 1066

Query: 179  RFYVTVGRNQ 188
            +  +   R +
Sbjct: 1067 KERLEAARKR 1076



 Score = 36.2 bits (83), Expect = 4.4,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 30/76 (39%), Gaps = 1/76 (1%)

Query: 45  DVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           +  L          ++  + A++  +   F +A + F +   + P + +A  + L  A  
Sbjct: 741 ETLLKKFPKAEVFDQLLNEWALINYEAGRFEQADKIFARLVAECPESPLADNAKLSLAES 800

Query: 104 QYSAGKYQQAASLGEE 119
               G++ +A    EE
Sbjct: 801 DLIQGEFARARKSLEE 816


>gi|207091899|ref|ZP_03239686.1| hypothetical protein HpylHP_02181 [Helicobacter pylori
           HPKX_438_AG0C1]
          Length = 198

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 56/147 (38%), Gaps = 4/147 (2%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           N   A  Y++    +   + +  +++L          +Y  A+   +EYI ++    NVD
Sbjct: 30  NLETADNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVD 89

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
           Y+ +L   S+    ++   DQ      +  +   +E+Y NS Y     +     +  L  
Sbjct: 90  YLTFLKLQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYM--QIKFILGQ 147

Query: 192 KEVE--IGRYYLKRGEYVAAIPRFQLV 216
            E+   I   Y KR +        + +
Sbjct: 148 NELNRAIANVYKKRHKPEGVKRYLERI 174


>gi|326799635|ref|YP_004317454.1| Tetratricopeptide TPR_1 repeat-containing protein [Sphingobacterium
           sp. 21]
 gi|326550399|gb|ADZ78784.1| Tetratricopeptide TPR_1 repeat-containing protein [Sphingobacterium
           sp. 21]
          Length = 1048

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 62/210 (29%), Gaps = 31/210 (14%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +++  ++   + +              +P +  A  +     +  +  G+ + A    ++
Sbjct: 591 LFQSGIIRGLQGDADGKISIMTDLLARYPNSNYADDANFEIPYTFFLKGENEIAIQGLQD 650

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            I +YP S  V      +G+       +           ++   R+VE+Y  +   K A 
Sbjct: 651 MIEKYPRSSYVPRALVTIGLVQYNSDNN--------DAAVRTFQRVVEQYPTTEEAKQAL 702

Query: 180 FYVTVGR------------------NQLAAKE-----VEIGRYYLKRGEYVAAIPRFQLV 216
             +                        L+  E      ++   Y  RG+Y AAI      
Sbjct: 703 KSIQNIYIDKGDAQGFLDYAGTTAIGDLSTAEQDNITFQVANNYFSRGDYQAAIEAVNAY 762

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEA 246
              +      + A     E+        EA
Sbjct: 763 FDKFPKPIQEKFARFIRAESLYKTGHPQEA 792



 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 55/171 (32%), Gaps = 24/171 (14%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           ++       +    Y  A     + ++   ++K  DY  +  G+     IR +   Q   
Sbjct: 555 AIARLGDSYFMLKDYGNAMEQYNKLMST--KAKTQDYALFQSGI-----IRGL---QGDA 604

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
              +  M+ ++ RY NS Y   A F +          E+              AI   Q 
Sbjct: 605 DGKISIMTDLLARYPNSNYADDANFEIPYTFFLKGENEI--------------AIQGLQD 650

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
           ++  Y  + +   A+  +          D A      + E+YP    A+  
Sbjct: 651 MIEKYPRSSYVPRALVTIGLVQYNSDNNDAAVRTFQRVVEQYPTTEEAKQA 701



 Score = 42.4 bits (99), Expect = 0.076,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 72/214 (33%), Gaps = 23/214 (10%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           ++ L+  T    +R +   + L+L ++ +++A     +      +      ++       
Sbjct: 797 NIILNDWTSAYTERTLLSVSNLYLDQKKYNEAIAPLKKLELTAEYKSHYNFAINNLMVAY 856

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           ++   +     +   Y+ +Y +S   D         YA     +  D    +        
Sbjct: 857 FNIHDFDNTL-MYARYVKEYEKSSVEDKA---KADLYAAKAHMLKGDLSTARK------E 906

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           + +   NS  + GA                 IG+   + GEY AA      ++ N    +
Sbjct: 907 LNQAVANSQTIVGAEAK------------YNIGKLQYEAGEYKAAQETAFDLIKNMPSYD 954

Query: 225 H-AEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           +   ++   L + Y  L    +A+  +  I E Y
Sbjct: 955 YWVAKSFILLADCYTKLKDEFQAKSTLQSIIENY 988



 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 23/71 (32%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D  T    +   ++    +  ++N+ KA E+F +            +      +  +   
Sbjct: 105 DHPTSANTKAAYFQVGRSYFAKKNYPKAIEWFKKLDGGNLSGSENTEYRFKLGYSLFMTE 164

Query: 109 KYQQAASLGEE 119
            Y  A  L E 
Sbjct: 165 DYNAAKPLFER 175



 Score = 35.9 bits (82), Expect = 5.7,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 51/168 (30%), Gaps = 45/168 (26%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFA------------------- 90
             +  ++ Y+   +  K  N+ KA +   +       F                      
Sbjct: 288 KTQNNQDDYQIGYIAYKNGNYEKAIKELEKLTEPDAYFQSGMIILGDSFLKLGNKESARN 347

Query: 91  ------------GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                        +  + LL  A + Y    +Q A    +EY+  YP SKN+D       
Sbjct: 348 AFFRASKLDFDPSMKEQGLLNYAKLSYELEFHQVALDATQEYLKTYPRSKNLDEA----- 402

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
                ++ +V    +  +  +  +  I +R   +     A   VT  R
Sbjct: 403 ---KTLLAEVLLSTKNYRSAVDILESIPKR---TKEANAAYQKVTYFR 444



 Score = 35.5 bits (81), Expect = 7.7,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 33/100 (33%), Gaps = 12/100 (12%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
            +   + Y+  +   +   ++ AY    +         + ++       +     ++ QA
Sbjct: 26  WQSLNQAYKTGMELYERGKYASAYNQLGKVETIRTNTTI-QQDESDQISLLKENARFYQA 84

Query: 114 ASLGE-----------EYITQYPESKNVDYVYYLVGMSYA 142
               E           ++I  +P S N    Y+ VG SY 
Sbjct: 85  VCALELGNHDAEGLFLKFIKDHPTSANTKAAYFQVGRSYF 124



 Score = 35.1 bits (80), Expect = 9.8,   Method: Composition-based stats.
 Identities = 32/249 (12%), Positives = 67/249 (26%), Gaps = 60/249 (24%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL------ 97
           +D+           R +    ++     N   A   F +    +P    A+++L      
Sbjct: 649 QDMIEKYPRSSYVPRALVTIGLVQYNSDNNDAAVRTFQRVVEQYPTTEEAKQALKSIQNI 708

Query: 98  -LMSAFV------------------------------QYSAGKYQQAASLGEEYITQYPE 126
            +                                    +S G YQ A      Y  ++P+
Sbjct: 709 YIDKGDAQGFLDYAGTTAIGDLSTAEQDNITFQVANNYFSRGDYQAAIEAVNAYFDKFPK 768

Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
                +  ++   S  +            +  L   + I+  +  S Y +          
Sbjct: 769 PIQEKFARFIRAESLYKT--------GHPQEALHDFNIILNDW-TSAYTERTL------- 812

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
                  + +   YL + +Y  AI   + +        H   A+  L+ AY  +   D  
Sbjct: 813 -------LSVSNLYLDQKKYNEAIAPLKKLELTAEYKSHYNFAINNLMVAYFNIHDFDNT 865

Query: 247 REVVSLIQE 255
                 ++E
Sbjct: 866 LMYARYVKE 874


>gi|322435204|ref|YP_004217416.1| Tetratricopeptide repeat [Acidobacterium sp. MP5ACTX9]
 gi|321162931|gb|ADW68636.1| Tetratricopeptide repeat [Acidobacterium sp. MP5ACTX9]
          Length = 315

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 55/146 (37%), Gaps = 8/146 (5%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
           R       +    D    +E+Y+ A        +  A   F    + +P   +A  +   
Sbjct: 170 RGGKPSAAIPQAADGPTAQELYKSAYGDYMAAKYPVASSEFGDIIKAYPNDTLAGNAYYY 229

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
              + Y AGKY  AA   +  + Q+P++  +   Y   G +  ++        + T   +
Sbjct: 230 LGEIDYRAGKYATAARSYDRVLEQFPDNNKIPAAYLHKGQALIEL--------KQTDAGV 281

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVG 185
           + +  +++R+ +SP    AR  +   
Sbjct: 282 RELRALIQRFPSSPEATQARAKLNAL 307



 Score = 42.8 bits (100), Expect = 0.058,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 31/104 (29%), Gaps = 14/104 (13%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
                  I++ Y N      A +Y+                   + G+Y  A   +  VL
Sbjct: 206 ASSEFGDIIKAYPNDTLAGNAYYYLGEID--------------YRAGKYATAARSYDRVL 251

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             + D      A     +A + L   D     +  + +R+P   
Sbjct: 252 EQFPDNNKIPAAYLHKGQALIELKQTDAGVRELRALIQRFPSSP 295


>gi|256370729|ref|YP_003108554.1| hypothetical protein SMDSEM_178 [Candidatus Sulcia muelleri SMDSEM]
 gi|256009521|gb|ACU52881.1| hypothetical protein SMDSEM_178 [Candidatus Sulcia muelleri SMDSEM]
          Length = 643

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 42/85 (49%)

Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
           +GM Y +   D  +DQ+     ++   + ++ Y NS  +  A+  +      L  K++ I
Sbjct: 468 LGMCYYKQANDYNFDQQNNLKSIKVFLKFIKSYPNSLKLNTAKKMLYKAVLNLKKKQISI 527

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYS 221
           G +Y KR +Y A++  F+  + N+ 
Sbjct: 528 GNFYFKRKKYKASLFIFKDNIENFK 552


>gi|152981712|ref|YP_001354159.1| Tol-Pal cell envelope complex subunit YbgF [Janthinobacterium sp.
           Marseille]
 gi|151281789|gb|ABR90199.1| YbgF subunit of Tol-Pal Cell Envelope Complex [Janthinobacterium
           sp. Marseille]
          Length = 243

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 53/129 (41%), Gaps = 8/129 (6%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           + ++  Y+ A+   K  ++ K+   F    + +P +  A  +        Y+   Y+ A 
Sbjct: 120 QSEQSAYDSALALFKAGDYKKSGTAFGDFVQRYPESAYAPSAQYWIGNAYYAQRDYKNAI 179

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
           +  +  + +YP++         +  S  ++      D+ A K  L+    +V +Y N+P 
Sbjct: 180 TAQQALLKKYPDNPKAADALLNIASSQTEL-----KDRAAAKKTLES---LVAKYPNAPA 231

Query: 175 VKGARFYVT 183
            + A+  + 
Sbjct: 232 AQTAKERLA 240



 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 58/142 (40%), Gaps = 22/142 (15%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           + +S   SA   + AG Y+++ +   +++ +YPES       Y +G +Y          Q
Sbjct: 121 SEQSAYDSALALFKAGDYKKSGTAFGDFVQRYPESAYAPSAQYWIGNAYYA--------Q 172

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           R  K  +     ++++Y ++P    A   +   + +L               +  AA   
Sbjct: 173 RDYKNAITAQQALLKKYPDNPKAADALLNIASSQTEL--------------KDRAAAKKT 218

Query: 213 FQLVLANYSDAEHAEEAMARLV 234
            + ++A Y +A  A+ A  RL 
Sbjct: 219 LESLVAKYPNAPAAQTAKERLA 240



 Score = 56.7 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 39/107 (36%), Gaps = 14/107 (13%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         V+RY  S Y   A+++              IG  Y  + +Y  AI  
Sbjct: 136 GDYKKSGTAFGDFVQRYPESAYAPSAQYW--------------IGNAYYAQRDYKNAITA 181

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            Q +L  Y D   A +A+  +  +   L     A++ +  +  +YP 
Sbjct: 182 QQALLKKYPDNPKAADALLNIASSQTELKDRAAAKKTLESLVAKYPN 228



 Score = 39.3 bits (91), Expect = 0.56,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 24/86 (27%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           D               Y     +  ++++  A        + +P    A  +LL  A  Q
Sbjct: 147 DFVQRYPESAYAPSAQYWIGNAYYAQRDYKNAITAQQALLKKYPDNPKAADALLNIASSQ 206

Query: 105 YSAGKYQQAASLGEEYITQYPESKNV 130
                   A    E  + +YP +   
Sbjct: 207 TELKDRAAAKKTLESLVAKYPNAPAA 232


>gi|149176357|ref|ZP_01854971.1| hypothetical protein PM8797T_07539 [Planctomyces maris DSM 8797]
 gi|148844709|gb|EDL59058.1| hypothetical protein PM8797T_07539 [Planctomyces maris DSM 8797]
          Length = 1027

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 77/217 (35%), Gaps = 22/217 (10%)

Query: 38  WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
                   +    +       + ++ A+   K+  +  A E F +  +D+P       + 
Sbjct: 20  CLILLLLSLLPLPLVHADKASDEFQLAIGLYKQNRWELATERFQKYLKDYPTDASVPLAK 79

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
                   +  KYQ+A ++  E++ Q+P++ N+    Y +      ++ D+         
Sbjct: 80  FYLGLTLVNQQKYQEARTILREFVKQHPQNNNLPDALYRIAECSY-LLDDLD-------A 131

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
             +  +  ++ Y N    + A  Y               G   L+RG+   AI  FQ  L
Sbjct: 132 AEKEFTEFLKLYPNHALEEWAYPYF--------------GDVLLRRGKADLAIKSFQRSL 177

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
             +     AE+A   L  +Y+     DEA +    I 
Sbjct: 178 ERHPKGAMAEDAQFGLASSYLRNKQSDEAEKRFKAIA 214



 Score = 66.3 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 69/225 (30%), Gaps = 30/225 (13%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           +    D  TD       +   +  + +Q + +A     +  +  P       +L   A  
Sbjct: 63  QKYLKDYPTDASVPLAKFYLGLTLVNQQKYQEARTILREFVKQHPQNNNLPDALYRIAEC 122

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
            Y       A     E++  YP     ++ Y            DV   +    L ++   
Sbjct: 123 SYLLDDLDAAEKEFTEFLKLYPNHALEEWAY--------PYFGDVLLRRGKADLAIKSFQ 174

Query: 164 RIVERYTNSPYVKGARFYVT--VGRNQL---AAK-----------------EVEIGRYYL 201
           R +ER+      + A+F +     RN+    A K                 ++ +     
Sbjct: 175 RSLERHPKGAMAEDAQFGLASSYLRNKQSDEAEKRFKAIAGQKNHSRGSDAQMSLATSLF 234

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
            RG+Y +A   F  +   + ++     A      AY  L    +A
Sbjct: 235 DRGQYQSAADAFLELPEKFPESPLGITARLNAGYAYYDLKQYAKA 279



 Score = 64.8 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 73/197 (37%), Gaps = 25/197 (12%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A        +  A + F +    FP + +   + L + +  Y   +Y +A    +  +T+
Sbjct: 230 ATSLFDRGQYQSAADAFLELPEKFPESPLGITARLNAGYAYYDLKQYAKAIQQFD-LVTK 288

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
            P+        Y  G+S           ++     +      ++    SP  K +  Y  
Sbjct: 289 DPKH--AANALYWKGVSL--------KGEQQLPAAITAFELALKSKP-SPQQKESTTY-- 335

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
              + L           L+ G+  AA   F  V+  +  +E A++++   +EA +    +
Sbjct: 336 QLADAL-----------LRSGKPAAAKALFLEVVKQFPKSELADDSLHFAIEAALLTDEL 384

Query: 244 DEAREVVSLIQERYPQG 260
            EA ++ +  ++ +PQ 
Sbjct: 385 AEAEQLSAQFEKTFPQS 401



 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 74/218 (33%), Gaps = 23/218 (10%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                     Y +       +    A + + +  + F  +  A  S L +A   +   K 
Sbjct: 627 PESPLTAEAAYMQGRSLENNKQLDAAVDVYQKVLQQFAPSRYAMLSGLQAARTLFQLKKI 686

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
            +     E  + ++P+  N+D +     +   +  +    D        +   R++    
Sbjct: 687 DEVNLAYEALLQKFPKVDNLDKILDEWALINYEAEQFAKSD--------EIFRRLITETP 738

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE-A 229
           +S     AR         LA  ++  G+          A   F  + ++    +  ++ +
Sbjct: 739 DSELADNARL-------SLAESDLIAGKL-------EPAAKAFTELQSDPKSDKKVQQVS 784

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
           + RL+E  + L   +   +    + +R+P+  +A + +
Sbjct: 785 LYRLIEINLELQKWELVDKFSKELLKRFPENEYAAFAQ 822



 Score = 39.7 bits (92), Expect = 0.48,   Method: Composition-based stats.
 Identities = 14/119 (11%), Positives = 37/119 (31%), Gaps = 5/119 (4%)

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL-----KRGEYVA 208
                       +  Y  + +      +    ++      V + ++YL      + +Y  
Sbjct: 35  HADKASDEFQLAIGLYKQNRWELATERFQKYLKDYPTDASVPLAKFYLGLTLVNQQKYQE 94

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
           A    +  +  +    +  +A+ R+ E    L  +D A +  +   + YP      +  
Sbjct: 95  ARTILREFVKQHPQNNNLPDALYRIAECSYLLDDLDAAEKEFTEFLKLYPNHALEEWAY 153



 Score = 39.3 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 67/222 (30%), Gaps = 40/222 (18%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
             +  + +   Y+ A   L+    + A   F +  + FP + +A  SL  +        +
Sbjct: 324 KPSPQQKESTTYQLADALLRSGKPAAAKALFLEVVKQFPKSELADDSLHFAIEAALLTDE 383

Query: 110 YQQAASLGEEYITQYPE-----SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
             +A  L  ++   +P+      + +     L G      I D             +   
Sbjct: 384 LAEAEQLSAQFEKTFPQSGLRLHQEL-----LKG-----RILDAKGKPEDLATAATHFQN 433

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY---- 220
           ++     S                LA   + + R Y K  +Y  +I     VL  Y    
Sbjct: 434 VLN---ESK---------LENTQLLAR--LYLARTYQKLKQYDKSI----EVLDPYLKDP 475

Query: 221 ---SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
                +    +A+      + +     EA  +     +++P 
Sbjct: 476 KAVKTSSEYADALVLQSNNFNSQQKYAEAESLSKEYLKQFPN 517



 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 41/122 (33%), Gaps = 14/122 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            + + +  Y+Q+       + + IV+  + SP        +     QLA           
Sbjct: 562 YRQLAERNYEQKQWARAKTFFNEIVKLGSESPEFPAGLSGLAWSEFQLAEN--------- 612

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
                 AA   FQ  +  + ++    EA      +      +D A +V   + +++    
Sbjct: 613 -----AAAAEHFQQFVQKFPESPLTAEAAYMQGRSLENNKQLDAAVDVYQKVLQQFAPSR 667

Query: 262 WA 263
           +A
Sbjct: 668 YA 669


>gi|154174122|ref|YP_001407991.1| hypothetical protein CCV52592_1590 [Campylobacter curvus 525.92]
 gi|112803354|gb|EAU00698.1| conserved hypothetical protein [Campylobacter curvus 525.92]
          Length = 215

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 74/195 (37%), Gaps = 11/195 (5%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
             ++ KF  T+ F +    + G   + +    L          E Y + +  +K+ +   
Sbjct: 1   MRKISKFIATLGFVV---LIGGCAEKYTELYNL-------TPDEWYAQIITDIKDSDLEA 50

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY-PESKNVDYVY 134
           A +++   + +   + +  + LL+ A    +  +Y  A    +EYI +Y       ++  
Sbjct: 51  ADKHYTSMASEHVASPLLEQILLILAQAHVNEEEYLLANHYLDEYIKRYGDGGPKTEFAQ 110

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
           YL   +          +Q+  +  ++ + + +  Y N+ +       +   +  L    +
Sbjct: 111 YLKIKANFDSFSQPNRNQKLMEDSVKEIEKFLYMYPNTEFRPLIETMLIKFKLSLYYLNI 170

Query: 195 EIGRYYLKRGEYVAA 209
           +I   Y + G  V+A
Sbjct: 171 QIEDLYKRTGRDVSA 185


>gi|258591278|emb|CBE67575.1| exported protein of unknown function [NC10 bacterium 'Dutch
           sediment']
          Length = 419

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 46/133 (34%), Gaps = 8/133 (6%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
                E+Y  A+    + ++  A   F      +P + +   +        YS  +Y QA
Sbjct: 295 TESAGELYRNALNDYAKGDYELAISGFRSQIELYPNSSLLPNARYWLGESYYSQKQYDQA 354

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
            +     + Q+PE           G ++ +M                 + R+++++  S 
Sbjct: 355 VTEFAVLVKQHPEHPKAASALLKQGFAHLEMGDKP--------KGRTVLDRLLKQFPKSQ 406

Query: 174 YVKGARFYVTVGR 186
             + A+  ++  +
Sbjct: 407 ESRWAKERLSQIK 419



 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 52/135 (38%), Gaps = 22/135 (16%)

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
            Y   ++               +L +      +E Y NS  +  AR+++           
Sbjct: 301 LYRNALNDYAK--------GDYELAISGFRSQIELYPNSSLLPNARYWL----------- 341

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
              G  Y  + +Y  A+  F +++  + +   A  A+ +   A++ +    + R V+  +
Sbjct: 342 ---GESYYSQKQYDQAVTEFAVLVKQHPEHPKAASALLKQGFAHLEMGDKPKGRTVLDRL 398

Query: 254 QERYPQGYWARYVET 268
            +++P+   +R+ + 
Sbjct: 399 LKQFPKSQESRWAKE 413


>gi|78187936|ref|YP_375979.1| putative lipoprotein [Chlorobium luteolum DSM 273]
 gi|78167838|gb|ABB24936.1| putative lipoprotein [Chlorobium luteolum DSM 273]
          Length = 306

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 84/240 (35%), Gaps = 43/240 (17%)

Query: 61  YEKAVLFLKEQNFSKAYEYFN--QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           Y  A    +++ +  A         +       +    L + A   Y++ +Y  ++ + +
Sbjct: 50  YRNATELYQKKEYENAAASLEPQLFASRA--TPLEDDVLFLLAQSYYASKQYLLSSDMYD 107

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
             + Q P S   +   Y++  SY Q+      DQ  T+  ++  S  +  Y+ +     A
Sbjct: 108 RLLQQVPSSPYREASRYMLAKSYEQLSPAYERDQEYTRRAIEAFSEYLAEYSLNDAASTA 167

Query: 179 R------------------------FYVTVGR---------------NQLAAKEVEIGRY 199
           R                          + + R               ++L A    I   
Sbjct: 168 RDLDTYSELLKIDPSRASYQRGYEAAKLAMARQDSVKYASAAIPVLHDKLGAATYSIATQ 227

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           Y+K  +Y AA   F+ V+ NY D    ++A + LVE  V      +AR  +    + YP+
Sbjct: 228 YVKLKKYKAAAIYFENVVRNYGDTPWMKKAQSGLVEVQVKRGKWFDARRALDSYLQSYPE 287



 Score = 40.1 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 28/67 (41%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A  ++K + +  A  YF    R++      +K+      VQ   GK+  A    + Y
Sbjct: 222 YSIATQYVKLKKYKAAAIYFENVVRNYGDTPWMKKAQSGLVEVQVKRGKWFDARRALDSY 281

Query: 121 ITQYPES 127
           +  YPE 
Sbjct: 282 LQSYPED 288


>gi|118475750|ref|YP_892222.1| hypothetical protein CFF8240_1061 [Campylobacter fetus subsp. fetus
           82-40]
 gi|118414976|gb|ABK83396.1| conserved hypothetical protein [Campylobacter fetus subsp. fetus
           82-40]
          Length = 215

 Score = 69.8 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/183 (14%), Positives = 73/183 (39%), Gaps = 10/183 (5%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
           ++ F++++   VG   ++  +++  +          Y + +  +K  +   A +++   +
Sbjct: 7   SVIFAVSLLVFVGCSDKNDNELFNLTPDGW------YSQIIEDIKSNDLDSADKHYVSFA 60

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
            +   + +  + LL+ A       +Y  A    +EYI +Y   +++++  YL   +    
Sbjct: 61  SEHVASPLLEQMLLILAQAHVDEEQYILANFYLDEYIKRYGTKQSIEFAQYLKIKANFDS 120

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV--EIGRYYLK 202
                 +Q+  +  +  + + +  Y N+ Y       +   R  LA + +  +I   Y +
Sbjct: 121 FTKPNRNQKLMQDSIYEIEKFLNAYPNTQYRPLIETMLVKFR--LAKQYLDTQIYDLYER 178

Query: 203 RGE 205
              
Sbjct: 179 TDR 181


>gi|82523886|emb|CAI78609.1| hypothetical protein [uncultured delta proteobacterium]
          Length = 275

 Score = 69.8 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 15/142 (10%), Positives = 55/142 (38%), Gaps = 8/142 (5%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           ++ + +   +   ++  + Y +A     +  + ++ + F      +P   +   S    A
Sbjct: 141 TTNNDHKPIMNFKKFPEDKYAEAKELYDKGLYKESKKAFEDFMGYYPEDKLTGNSQFWIA 200

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
            + +  G Y+++    ++ +  +     V   Y   G++Y ++      D   T  ++  
Sbjct: 201 EIYFKEGDYKKSIFEYQKLMDNFKGHPKVPSAYLKQGLAYYKI------DDSFTGKLI-- 252

Query: 162 MSRIVERYTNSPYVKGARFYVT 183
           + ++++ +  +     A+  + 
Sbjct: 253 LEKLIKLFPGTEQANTAKNKLK 274



 Score = 42.0 bits (98), Expect = 0.086,   Method: Composition-based stats.
 Identities = 18/122 (14%), Positives = 39/122 (31%), Gaps = 14/122 (11%)

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
           YD+   K   +     +  Y        ++                I   Y K G+Y  +
Sbjct: 167 YDKGLYKESKKAFEDFMGYYPEDKLTGNSQ--------------FWIAEIYFKEGDYKKS 212

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
           I  +Q ++ N+        A  +   AY  +      + ++  + + +P    A   +  
Sbjct: 213 IFEYQKLMDNFKGHPKVPSAYLKQGLAYYKIDDSFTGKLILEKLIKLFPGTEQANTAKNK 272

Query: 270 VK 271
           +K
Sbjct: 273 LK 274


>gi|303328462|ref|ZP_07358899.1| TPR domain protein [Desulfovibrio sp. 3_1_syn3]
 gi|302861456|gb|EFL84393.1| TPR domain protein [Desulfovibrio sp. 3_1_syn3]
          Length = 328

 Score = 69.8 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 58/142 (40%), Gaps = 10/142 (7%)

Query: 38  WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
           W + S + V      D+     +++  V     + + +A   F    +++    +A ++ 
Sbjct: 190 WGQPSPQPVVQAPQKDISLA--LFDAGVNAFNARKYEEAQRSFTDFLKNYKDHNLAPEAQ 247

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
              A   +   ++  AA   +  I +YP+S      Y   G+S++++      +Q A   
Sbjct: 248 YYLAECYFQRNQFADAALAYDTVIKKYPKSTRTPGAYLKQGISFSKI------NQGAAAK 301

Query: 158 MLQYMSRIVERYTNSPYVKGAR 179
               M  +++++ NSP    A+
Sbjct: 302 AR--MQELIKKFPNSPEAARAK 321



 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/119 (11%), Positives = 42/119 (35%), Gaps = 14/119 (11%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           R  +   +  +  ++ Y +      A++Y+                 Y +R ++  A   
Sbjct: 221 RKYEEAQRSFTDFLKNYKDHNLAPEAQYYLAEC--------------YFQRNQFADAALA 266

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           +  V+  Y  +     A  +   ++  +     A+  +  + +++P    A   ++ +K
Sbjct: 267 YDTVIKKYPKSTRTPGAYLKQGISFSKINQGAAAKARMQELIKKFPNSPEAARAKSFLK 325


>gi|149178098|ref|ZP_01856693.1| hypothetical protein PM8797T_14224 [Planctomyces maris DSM 8797]
 gi|148843018|gb|EDL57386.1| hypothetical protein PM8797T_14224 [Planctomyces maris DSM 8797]
          Length = 484

 Score = 69.8 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 74/187 (39%), Gaps = 25/187 (13%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +++++      +N  +A E         P   +A  +L+++A      G+Y  A    + 
Sbjct: 223 LFDRSRPVFDTEN--RALEALKSIWLHDPTGPLADDALMLTASHYLKKGRYMDA----DR 276

Query: 120 YITQ----YPESKNVDYVYYLVG-----MSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             +     YP+S ++    +++G     MSY    +   YD    K   +     +  + 
Sbjct: 277 TFSLLREEYPKSPHLKDA-FMLGTHVKLMSY----QGPAYDATVLKDAGELKETTLRLFP 331

Query: 171 NSPYVKGARFY--VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
                + AR    +       A +E E  +Y+++RG+  +A     L++ +Y  +  A +
Sbjct: 332 E---AQQARLKEELKKIEQAKAKREWETVQYWMRRGKPKSAAIYCNLLIEHYPTSPFANQ 388

Query: 229 AMARLVE 235
           A   L E
Sbjct: 389 ARELLAE 395



 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 48/253 (18%), Positives = 87/253 (34%), Gaps = 46/253 (18%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+KA    K Q++ KA + F    + F    +   +  M A  Q++  KY  A    ++ 
Sbjct: 96  YQKANATFKAQDYKKAEKEFKAIVKKFKNDPIKEDAQFMVAESQFAQKKYSWAQDSYDQL 155

Query: 121 ITQYPESKNVDYV---YYLVGMSYAQ--------MIRDVPYD---------QRATKLMLQ 160
           +  +P S+++D      +++   + Q         I+ V  +             K    
Sbjct: 156 LVDFPSSRHLDQTTKRLFMIARYWLQEPSIVKGGDIQQVNLEDPGSETPEIPTDGKDRKS 215

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE----------VEIGRYYLKRGEYVAAI 210
             + +   +  S  V             +   +          +    +YLK+G Y+ A 
Sbjct: 216 RWALVPNLFDRSRPVFDTENRALEALKSIWLHDPTGPLADDALMLTASHYLKKGRYMDAD 275

Query: 211 PRFQLVLANYSDAEHAEEA---------MARLVEAYVALALMD---EAREVVSLIQERYP 258
             F L+   Y  + H ++A         M+    AY A  L D        + L    +P
Sbjct: 276 RTFSLLREEYPKSPHLKDAFMLGTHVKLMSYQGPAYDATVLKDAGELKETTLRL----FP 331

Query: 259 QGYWARYVETLVK 271
           +   AR  E L K
Sbjct: 332 EAQQARLKEELKK 344



 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 23/223 (10%), Positives = 57/223 (25%), Gaps = 68/223 (30%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +    A   + A  Y++A    +  + ++      +   ++V  S     +         
Sbjct: 94  AEYQKANATFKAQDYKKAEKEFKAIVKKFKNDPIKEDAQFMVAESQFAQKKYSW------ 147

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL-------------- 201
                   +++  + +S ++      +             I RY+L              
Sbjct: 148 --AQDSYDQLLVDFPSSRHLDQTTKRL-----------FMIARYWLQEPSIVKGGDIQQV 194

Query: 202 ------------------KRGEYVAA-------------IPRFQLVLANY----SDAEHA 226
                             ++  +                  R    L +          A
Sbjct: 195 NLEDPGSETPEIPTDGKDRKSRWALVPNLFDRSRPVFDTENRALEALKSIWLHDPTGPLA 254

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
           ++A+      Y+      +A    SL++E YP+    +    L
Sbjct: 255 DDALMLTASHYLKKGRYMDADRTFSLLREEYPKSPHLKDAFML 297


>gi|260062000|ref|YP_003195080.1| hypothetical protein RB2501_10422 [Robiginitalea biformata
           HTCC2501]
 gi|88783562|gb|EAR14733.1| hypothetical protein RB2501_10422 [Robiginitalea biformata
           HTCC2501]
          Length = 1006

 Score = 69.8 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 64/201 (31%), Gaps = 24/201 (11%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+    + K +++  A  +F + +R  P       + +      + + +Y+ A    ++ 
Sbjct: 504 YQMGYTYFKLRDYGNAATHFQRFARSAPDGARKTDAWMRLGDSYFVSSRYRPAIEAYDQ- 562

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
                 S   DY  Y   +SY          Q  TK     +   + R+ NS     A  
Sbjct: 563 -ALATGSPERDYAAYQKAISYG------FLGQEQTKR--DALDTFIGRFPNSSLKDDAL- 612

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
                         E+G  Y++      AI  +  ++     +     A  R    Y   
Sbjct: 613 -------------FELGNSYVQSAADNQAIASYDRLIRESPGSSLVPAAKMRKGLVYYNG 659

Query: 241 ALMDEAREVVSLIQERYPQGY 261
               +A  V   + ++YP   
Sbjct: 660 GQNQQALTVFKEVADQYPNSQ 680



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 38/118 (32%), Gaps = 8/118 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+KA+ +          +  +     FP + +   +L         +    QA +  +  
Sbjct: 576 YQKAISYGFLGQEQTKRDALDTFIGRFPNSSLKDDALFELGNSYVQSAADNQAIASYDRL 635

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           I + P S  V       G+ Y    ++        +  L     + ++Y NS     A
Sbjct: 636 IRESPGSSLVPAAKMRKGLVYYNGGQN--------QQALTVFKEVADQYPNSQEAMQA 685



 Score = 44.7 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 49/175 (28%), Gaps = 27/175 (15%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              +     +++A  Y  +                +  +  Y  G Y+ A     ++   
Sbjct: 250 GESYFNLGRYAEAIPYLEKYQGKR--GRWNNTDYYLLGYAHYKQGDYENAI---RQFNKI 304

Query: 124 YPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
                +V    YY +G  Y ++ +         +  L       +      +    R   
Sbjct: 305 VGGDDSVAQNAYYHLGECYLELDKK--------QEALNAFRNASQM----EFSPEIRQDA 352

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
            +   +L+         Y     Y       Q  +  Y D E  EE    LV++Y
Sbjct: 353 FLNYARLS---------YEVGNPYQPVPRVLQEYMEAYPDGEDHEEVRELLVDSY 398



 Score = 43.2 bits (101), Expect = 0.037,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 64/218 (29%), Gaps = 26/218 (11%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
            ++  YQ+  +   V     + +  A E F +  +         +S    A   ++ G +
Sbjct: 418 ASEATYQKVAFFYGVEQFLAEAYPGALESFEKAIQAGADPRYTARSRYWKAESAFAVGNF 477

Query: 111 QQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +QA +   ++      +   +Y    Y +G +Y ++        R       +  R    
Sbjct: 478 EQALTQYAQFRASSAAASLEEYADLDYQMGYTYFKL--------RDYGNAATHFQRFARS 529

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
             +      A   +              G  Y     Y  AI  +   LA    +   + 
Sbjct: 530 APDGARKTDAWMRL--------------GDSYFVSSRYRPAIEAYDQALAT--GSPERDY 573

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
           A  +   +Y  L      R+ +     R+P        
Sbjct: 574 AAYQKAISYGFLGQEQTKRDALDTFIGRFPNSSLKDDA 611


>gi|226227346|ref|YP_002761452.1| hypothetical protein GAU_1940 [Gemmatimonas aurantiaca T-27]
 gi|226090537|dbj|BAH38982.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 285

 Score = 69.4 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 16/136 (11%), Positives = 35/136 (25%), Gaps = 8/136 (5%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                   +++   +  L   + S A   F +    +P +     +    A         
Sbjct: 158 PPTGPGPNQLFTNGMDQLNRGSTSTARTLFQELITTYPTSDYVPDAQYWIAESLAKENNL 217

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A +     ++ +P S       Y            +   Q       Q   +++ +Y 
Sbjct: 218 AAADAAYAAVVSAHPTSAKAPTALYKRA--------QLLLRQNNATQAKQLFEQVIAKYP 269

Query: 171 NSPYVKGARFYVTVGR 186
            S     A   +   R
Sbjct: 270 RSNEAALAEETLKTLR 285



 Score = 42.0 bits (98), Expect = 0.088,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 47/132 (35%), Gaps = 17/132 (12%)

Query: 143 QMIRDVPYDQ---RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
             +     DQ    +T         ++  Y  S YV  A++++      LA         
Sbjct: 165 NQLFTNGMDQLNRGSTSTARTLFQELITTYPTSDYVPDAQYWIAE---SLA--------- 212

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
             K     AA   +  V++ +  +  A  A+ +  +  +      +A+++   +  +YP+
Sbjct: 213 --KENNLAAADAAYAAVVSAHPTSAKAPTALYKRAQLLLRQNNATQAKQLFEQVIAKYPR 270

Query: 260 GYWARYVETLVK 271
              A   E  +K
Sbjct: 271 SNEAALAEETLK 282


>gi|242309719|ref|ZP_04808874.1| competence lipoprotein [Helicobacter pullorum MIT 98-5489]
 gi|239523720|gb|EEQ63586.1| competence lipoprotein [Helicobacter pullorum MIT 98-5489]
          Length = 222

 Score = 69.4 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 68/176 (38%), Gaps = 6/176 (3%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
                +S+  + LD V   +     Y+  +  ++  +  KA  YF     +   + +  +
Sbjct: 19  GACSSKSNSGLALDEV--NKPADYWYQSMLKEIRNGDLEKADSYFTSLQSEHLNSPLLSE 76

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           ++L+         +Y  AA   +EY  ++   +N+D++ +L   +          DQ+  
Sbjct: 77  AMLILGRAHMQEEEYLLAAFYFDEYTKRFGNEQNIDFIKFLKLQANYFAFAKQFRDQQLL 136

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV--EIGRYYLKRGEYVAA 209
              +Q      ++Y  S Y       +     +LA   +  EI + Y K+ +  AA
Sbjct: 137 AKSIQEAQDFSQKYPYSRYRPMVDTMLLKL--ELANLSLNKEIIKLYNKKDKQQAA 190


>gi|325107331|ref|YP_004268399.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces
           brasiliensis DSM 5305]
 gi|324967599|gb|ADY58377.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces
           brasiliensis DSM 5305]
          Length = 1054

 Score = 69.4 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 73/236 (30%), Gaps = 31/236 (13%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
           FF++ +         SS         D       Y   +    ++ +  A +        
Sbjct: 12  FFALLLILCGQVLSLSSSVALAAPADDE------YTLGITLYGQKRWDLAADTLKNYLET 65

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
           +P         +  A    +  KY +A ++  +++  +P++KN     Y V      +  
Sbjct: 66  YPDHENVPLGKVYLAQSYVNQQKYAEARTILRDFLKAHPQNKNAAQAQYRVAECSYFLDD 125

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
                    K  ++     +++  N    + A  Y+                 YL+ G+ 
Sbjct: 126 --------YKAAIKDFQAFLDQNPNDALSEWALPYL--------------ADSYLRDGQP 163

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQERYPQGY 261
             A   F+  L  + +    E+++  L  AY        A  E   LI    P G 
Sbjct: 164 GKAELSFKQSLQTFPEGRFQEDSLFGLARAYELQNEPKSAIAEYQKLIAL--PDGD 217



 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 67/198 (33%), Gaps = 30/198 (15%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A  +L++    KA   F Q  + FP       SL   A       + + A +  ++ I  
Sbjct: 154 ADSYLRDGQPGKAELSFKQSLQTFPEGRFQEDSLFGLARAYELQNEPKSAIAEYQKLIAL 213

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
            P+          +GM Y Q        Q+   L  +  + + + Y  S  V  A     
Sbjct: 214 -PDGDRAAEALVNLGMLYFQ--------QQNYNLAAEVFTLLAKDYPESSLVPLAN---- 260

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL--ANYSDAEHAEEAMARLVEAYVALA 241
                     +  G  Y    ++  AI R +L      YS       A   L + Y +  
Sbjct: 261 ----------LNAGYAYYSLNQWDKAIERLELAKTSEAYSAT-----AQYWLAQTYKSQG 305

Query: 242 LMDEAREVVSLIQERYPQ 259
            +D+A + +  +++  P 
Sbjct: 306 QIDKAIQQLEELRQNNPS 323



 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 67/187 (35%), Gaps = 27/187 (14%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
               R    +    +L+ ++QN++ A E F   ++D+P + +   + L + +  YS  ++
Sbjct: 214 PDGDRAAEALVNLGMLYFQQQNYNLAAEVFTLLAKDYPESSLVPLANLNAGYAYYSLNQW 273

Query: 111 QQAASLGEEYITQYPESK-NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            +A    E        S+       Y +  +Y          Q      +Q +  + +  
Sbjct: 274 DKAIERLE----LAKTSEAYSATAQYWLAQTY--------KSQGQIDKAIQQLEELRQNN 321

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
                 +  +  V            ++   Y ++  Y  A   +Q  L  +S  + AE A
Sbjct: 322 P----SEDLQPRVVY----------QLADTYFQQASYAKAAGVYQEYLKAFSTGDQAEAA 367

Query: 230 MARLVEA 236
              LVE+
Sbjct: 368 WLHLVES 374



 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 16/126 (12%), Positives = 32/126 (25%), Gaps = 11/126 (8%)

Query: 64   AVLFLKEQNFSKAYEYFNQCSRDFPFAGV--ARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
               ++ + NF +A + F              A +S    A        Y+ A        
Sbjct: 936  GRSYIAQANFDQARQTFQAVLDRIAGQKTLAAAQSQFYLAETSLMQKNYEDALKEYIRVA 995

Query: 122  TQYPESKNVDYV-YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
              +P   ++     +  G     +              +Q    +   Y  S +   A  
Sbjct: 996  VLFPGFPDLQSAALFQAGQCDEVL--------GHPTQAIQSYENLRRLYPESEFASRAAE 1047

Query: 181  YVTVGR 186
             +   R
Sbjct: 1048 RIEKLR 1053


>gi|118580269|ref|YP_901519.1| hypothetical protein Ppro_1849 [Pelobacter propionicus DSM 2379]
 gi|118502979|gb|ABK99461.1| hypothetical protein Ppro_1849 [Pelobacter propionicus DSM 2379]
          Length = 297

 Score = 69.0 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 37/110 (33%), Gaps = 8/110 (7%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              F+ E  + +A   + +    FP +     +    A   Y   +Y+ A      +   
Sbjct: 41  GDAFMAEGEYYRAITEYKKLIILFPASRRVEDAGFRIAMAYYRGEEYEAAVRAFAAFQVN 100

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
           +P S       Y  GMS+  + R         +      SR+V  Y +S 
Sbjct: 101 HPGSGYAPQAGYYEGMSHLGLNR--------PEKAENSFSRVVATYPDSD 142



 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 58/171 (33%), Gaps = 26/171 (15%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
             +  L       + G+Y +A +  ++ I  +P S+ V+   + + M+Y +         
Sbjct: 33  TEEVQLKLGDAFMAEGEYYRAITEYKKLIILFPASRRVEDAGFRIAMAYYRG-------- 84

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              +  ++  +     +  S Y   A +Y   G + L                   A   
Sbjct: 85  EEYEAAVRAFAAFQVNHPGSGYAPQAGYY--EGMSHLG------------LNRPEKAENS 130

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEA--REVVSLIQERYPQGY 261
           F  V+A Y D++    A+  L  + +     D A  R+ +      YP   
Sbjct: 131 FSRVVATYPDSDSGRRAL--LGNSLIRFDRKDTAGCRQQLERYLADYPGDE 179



 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 39/110 (35%), Gaps = 14/110 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             +    +++  +  S  V+ A F + +               Y +  EY AA+  F   
Sbjct: 52  RAITEYKKLIILFPASRRVEDAGFRIAMA--------------YYRGEEYEAAVRAFAAF 97

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
             N+  + +A +A      +++ L   ++A    S +   YP     R  
Sbjct: 98  QVNHPGSGYAPQAGYYEGMSHLGLNRPEKAENSFSRVVATYPDSDSGRRA 147



 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/146 (13%), Positives = 52/146 (35%), Gaps = 9/146 (6%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           + + +      R +   +  A+ + + + +  A   F     + P +G A ++       
Sbjct: 58  KKLIILFPASRRVEDAGFRIAMAYYRGEEYEAAVRAFAAFQVNHPGSGYAPQAGYYEGMS 117

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
                + ++A +     +  YP+S +         +    +IR   +D++ T    Q + 
Sbjct: 118 HLGLNRPEKAENSFSRVVATYPDSDSG-----RRALLGNSLIR---FDRKDTAGCRQQLE 169

Query: 164 RIVERYTNSPYVKGARFYVTVG-RNQ 188
           R +  Y            +++  RN+
Sbjct: 170 RYLADYPGDERAHNVSEAISLLDRNR 195



 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 32/70 (45%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +++G  ++  GEY  AI  ++ ++  +  +   E+A  R+  AY      + A    +  
Sbjct: 38  LKLGDAFMAEGEYYRAITEYKKLIILFPASRRVEDAGFRIAMAYYRGEEYEAAVRAFAAF 97

Query: 254 QERYPQGYWA 263
           Q  +P   +A
Sbjct: 98  QVNHPGSGYA 107


>gi|82523862|emb|CAI78810.1| hypothetical protein [uncultured candidate division WS3 bacterium]
          Length = 310

 Score = 69.0 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 45/126 (35%), Gaps = 8/126 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y++A L   +  +  A + F    +++P    A  +        Y    +  A    +  
Sbjct: 192 YDRAYLDFSKGKYQLAIQGFTDYLKNYPGTERADNAQYWIGECYYVQRDHDSAIEAFQRV 251

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           + QYP+          +G +   + R+        +  ++ +  ++ERY  +   + AR 
Sbjct: 252 LDQYPDGNKAPGAMLKIGYALLSLDRE--------REAIRQLKTVMERYPQTSEAEHARA 303

Query: 181 YVTVGR 186
            +    
Sbjct: 304 KLLSLN 309



 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 54/138 (39%), Gaps = 22/138 (15%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +    A++ +S GKYQ A     +Y+  YP ++  D   Y +G  Y      V  D  + 
Sbjct: 190 AAYDRAYLDFSKGKYQLAIQGFTDYLKNYPGTERADNAQYWIGECYY-----VQRDHDS- 243

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
              ++   R++++Y +     GA   +      L            +R     AI + + 
Sbjct: 244 --AIEAFQRVLDQYPDGNKAPGAMLKIGYALLSLDR----------ERE----AIRQLKT 287

Query: 216 VLANYSDAEHAEEAMARL 233
           V+  Y     AE A A+L
Sbjct: 288 VMERYPQTSEAEHARAKL 305



 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 14/113 (12%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           +L +Q  +  ++ Y  +     A++++                YY++R    +AI  FQ 
Sbjct: 205 QLAIQGFTDYLKNYPGTERADNAQYWIGEC-------------YYVQRDH-DSAIEAFQR 250

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           VL  Y D   A  AM ++  A ++L    EA   +  + ERYPQ   A +   
Sbjct: 251 VLDQYPDGNKAPGAMLKIGYALLSLDREREAIRQLKTVMERYPQTSEAEHARA 303


>gi|225851488|ref|YP_002731722.1| tetratricopeptide repeat domain protein [Persephonella marina
           EX-H1]
 gi|225645952|gb|ACO04138.1| tetratricopeptide repeat domain protein [Persephonella marina
           EX-H1]
          Length = 934

 Score = 69.0 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 100/245 (40%), Gaps = 27/245 (11%)

Query: 28  FSIAVCFLVGWERQSSRDV--YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           F +A  F+   +   +RD+   L    D   Q+  Y  A  +  E  + +A + F   + 
Sbjct: 531 FLLAYIFMRKGDIDKARDILRELSKGDDKIAQQAGYLYAYSYFSEGKYIEAIKAFRDYAE 590

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
            +    +   ++L  A   Y+AG+ ++A  + +++I ++  +       Y         +
Sbjct: 591 KYRGTELGNLAVLRMADSYYNAGQKEKARKIYQQFIEEHANTPEAIDAAY--------QL 642

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
             +  ++    +  Q   + +E+Y   P+V   +              +++G  Y ++ E
Sbjct: 643 TVLEMEESGADVASQI-EKFIEKYPQYPFVSLLK--------------LQLGDLYTEKQE 687

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
           Y  A   ++ ++    D + +E A+ +L          D+A ++++   + YP+G +   
Sbjct: 688 YDKAEKIYRELIEA--DIKESEYALYKLGYLKYISGDKDQAVKILTRYIKIYPRGEFNVQ 745

Query: 266 VETLV 270
            + L+
Sbjct: 746 AKELL 750



 Score = 42.8 bits (100), Expect = 0.050,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 63/214 (29%), Gaps = 36/214 (16%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
              +  +Y+   L     +  +A +   +  + +P      ++  + A +    G   +A
Sbjct: 704 KESEYALYKLGYLKYISGDKDQAVKILTRYIKIYPRGEFNVQAKELLAKIFEEQGDLDKA 763

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
            ++ ++           D   + + M   +  R              Y   I  R+    
Sbjct: 764 IAVMKKL-------PATDENKFKLAMLLYKAGRYT--------EAKSYFEEIYTRFPKYR 808

Query: 174 ---------------YVKGARFYVTVG-----RNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
                          Y + A  Y+         N +A     IG  Y K  +   A+  F
Sbjct: 809 ADIAFYLGKIQFENGYFQNALRYLEEALNSSDYNNVAESYYLIGLIYEKLEDIENALNSF 868

Query: 214 QLVLANYSD-AEHAEEAMARLVEAYVALALMDEA 246
             V+  Y D  E   +A  ++ E         EA
Sbjct: 869 INVIYLYPDATEQVIKARLKVAEIMKKQGRRSEA 902



 Score = 35.9 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 8/68 (11%), Positives = 23/68 (33%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
               +V  +  +  +    +      N+  A E   +  + +P  G +  +  +   + Y
Sbjct: 83  EKPQAVLGIPEKNALLADGIESFFRGNYITAREKLEKLIKKYPKTGFSGTAHYLLGLIYY 142

Query: 106 SAGKYQQA 113
                ++A
Sbjct: 143 RMDNKKEA 150


>gi|326802361|ref|YP_004320180.1| Tetratricopeptide TPR_1 repeat-containing protein [Sphingobacterium
           sp. 21]
 gi|326553125|gb|ADZ81510.1| Tetratricopeptide TPR_1 repeat-containing protein [Sphingobacterium
           sp. 21]
          Length = 845

 Score = 69.0 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 68/209 (32%), Gaps = 27/209 (12%)

Query: 61  YEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           Y  A    +  +FS A +YF              +    +        S   Y +A    
Sbjct: 354 YGLAYAAFRNDSFSIAADYFERFLAVEGSSLEENMRHDVIARLGDSYLSLRNYDRANEYY 413

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           ++ I    ++ N DY  +  G+     I+ +  D  A    L  +  ++E++  S Y   
Sbjct: 414 DQLI--NSKAPNQDYALFQRGI-----IQGLQGDNEAK---LSTLRSVIEQFPGSNYADD 463

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
                            E+   Y    +Y AAI   Q ++  Y  + +   A+  +    
Sbjct: 464 VA--------------FEVPYTYFITEDYDAAIEGLQQMIEQYPRSSYVPRALMTIGLVQ 509

Query: 238 VALALMDEAREVVSLIQERYPQGYWARYV 266
                 + A+     + E+YP    A+  
Sbjct: 510 YNKDETEAAKATFQRVVEKYPTTEEAKQA 538



 Score = 65.9 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 33/238 (13%), Positives = 69/238 (28%), Gaps = 40/238 (16%)

Query: 45  DVYLDSVTDVRYQRE---VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           + Y D + + +   +   ++++ ++   + +              FP +  A        
Sbjct: 410 NEYYDQLINSKAPNQDYALFQRGIIQGLQGDNEAKLSTLRSVIEQFPGSNYADDVAFEVP 469

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           +  +    Y  A    ++ I QYP S  V      +G+               T+     
Sbjct: 470 YTYFITEDYDAAIEGLQQMIEQYPRSSYVPRALMTIGLVQYNKDE--------TEAAKAT 521

Query: 162 MSRIVERYTNSPYVK--------------GARFYVTVG------------RNQLAAKEVE 195
             R+VE+Y  +   K               A  Y+               ++ LA    +
Sbjct: 522 FQRVVEKYPTTEEAKQALRSIENIYLDQGDASSYIQYATGANIGDLSTAEQDNLA---FQ 578

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +      RGEY  A+         +      + A      +        EA   +++I
Sbjct: 579 VANSLFTRGEYGPAVEAINAYFDKFPKPIQEKHARYIRGVSLYHTGHPKEALHDLNII 636



 Score = 40.1 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 82/236 (34%), Gaps = 32/236 (13%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKY 110
            D+ YQ+  Y + + F  E+ F  +   F +  + FP  A +A  +    A   Y   KY
Sbjct: 269 ADMVYQKVTYYRGLEFYNERAFENSISLFMRSEK-FPIDAEMAALATYWKAEAMYEVRKY 327

Query: 111 QQAASLGEEYITQYPESKNV---DYVYYLVGMSYAQMIRDVPYDQRATKLML-------- 159
           ++A      ++   P ++N    +Y  Y  G++YA    D                    
Sbjct: 328 REAVENFSRFLRL-PAARNTNVYNYANY--GLAYAAFRNDSFSIAADYFERFLAVEGSSL 384

Query: 160 --QYMSRIVERYTNS----PYVKGARFYVTVGRNQLAAKEVEIGRYYLKR-------GEY 206
                  ++ R  +S         A  Y     N  A  +        +R       G+ 
Sbjct: 385 EENMRHDVIARLGDSYLSLRNYDRANEYYDQLINSKAPNQDYAL---FQRGIIQGLQGDN 441

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
            A +   + V+  +  + +A++    +   Y      D A E +  + E+YP+  +
Sbjct: 442 EAKLSTLRSVIEQFPGSNYADDVAFEVPYTYFITEDYDAAIEGLQQMIEQYPRSSY 497


>gi|91202534|emb|CAJ72173.1| hypothetical protein kustd1428 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 611

 Score = 69.0 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 29/220 (13%), Positives = 61/220 (27%), Gaps = 22/220 (10%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
             D    +  YE    +        A + +    + +  +  A+ +L       Y     
Sbjct: 244 PNDKMVVKAYYELGNYYYDLGFNFLALQEYQVVVKKYITSLFAKDALFKIGDCYYRLNDP 303

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           + A     ++I  YP+   +              I D    Q           R++  Y 
Sbjct: 304 ESAIRAYFQFIYGYPKDPLIADA--------FMGIGDSLMMQGFYVRAKDTYERVLNGYP 355

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            +     A+              + I +   K  +Y  AI         Y+  +   E  
Sbjct: 356 EAEIAAKAQ--------------LNIAKALAKMEKYREAIRALMEARELYNSLQVGVEIE 401

Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
             + +   +L   ++A+ V+           +A     L+
Sbjct: 402 YLIGKCLFSLKEYEDAKTVLGNFLANAGNERYAEDASFLL 441



 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 67/221 (30%), Gaps = 43/221 (19%)

Query: 45  DVYLDSVTDVRYQREVYEK-----------AVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
           + Y +++  +   RE+Y                    + +  A         +      A
Sbjct: 375 EKYREAIRALMEARELYNSLQVGVEIEYLIGKCLFSLKEYEDAKTVLGNFLANAGNERYA 434

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY-----LVGMSYAQMIRDV 148
             +  +     Y+   Y +A  + +  +  YP S NV    Y     L  M +       
Sbjct: 435 EDASFLLGECFYNNENYVEAFQVFKRALETYPNSSNVPRGMYFLGKSLRAMHFYDS---- 490

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
                     ++     ++ +  + Y            +++A   +EIG  Y     Y  
Sbjct: 491 ---------AIKTFREGIQFWPTNEYA-----------DKMA---MEIGWCYFDDDNYAR 527

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           A   F+  +  Y  ++   E M  L +A       ++A + 
Sbjct: 528 AQEGFKDFIKKYPYSKVLIEGMVGLADALFCEKKYEQAVKA 568



 Score = 49.0 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 70/228 (30%), Gaps = 45/228 (19%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
               + +  + +A + + +    +P A +A K+ L  A       KY++A     E    
Sbjct: 331 GDSLMMQGFYVRAKDTYERVLNGYPEAEIAAKAQLNIAKALAKMEKYREAIRALMEAREL 390

Query: 124 YPESKNVD-YVYYLVGMSYAQM-----------------------------IRDVPYDQR 153
           Y  S  V   + YL+G     +                             + +  Y+  
Sbjct: 391 Y-NSLQVGVEIEYLIGKCLFSLKEYEDAKTVLGNFLANAGNERYAEDASFLLGECFYNNE 449

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
                 Q   R +E Y NS  V      +         K +    +Y       +AI  F
Sbjct: 450 NYVEAFQVFKRALETYPNSSNVP---RGMYFL-----GKSLRAMHFYD------SAIKTF 495

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +  +  +   E+A++    +   Y        A+E      ++YP   
Sbjct: 496 REGIQFWPTNEYADKMAMEIGWCYFDDDNYARAQEGFKDFIKKYPYSK 543



 Score = 45.9 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 60/177 (33%), Gaps = 22/177 (12%)

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
            KA + + +    +P   +  K+        Y  G    A    +  + +Y  S      
Sbjct: 230 DKAAQIYQRAQIKYPNDKMVVKAYYELGNYYYDLGFNFLALQEYQVVVKKYITSLFAKDA 289

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
            + +G  Y ++           +  ++   + +  Y   P +  A               
Sbjct: 290 LFKIGDCYYRLND--------PESAIRAYFQFIYGYPKDPLIADAF-------------- 327

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
           + IG   + +G YV A   ++ VL  Y +AE A +A   + +A   +    EA   +
Sbjct: 328 MGIGDSLMMQGFYVRAKDTYERVLNGYPEAEIAAKAQLNIAKALAKMEKYREAIRAL 384



 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 25/51 (49%)

Query: 67  FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +  + N+++A E F    + +P++ V  + ++  A   +   KY+QA    
Sbjct: 519 YFDDDNYARAQEGFKDFIKKYPYSKVLIEGMVGLADALFCEKKYEQAVKAY 569


>gi|149196489|ref|ZP_01873543.1| hypothetical protein LNTAR_08364 [Lentisphaera araneosa HTCC2155]
 gi|149140169|gb|EDM28568.1| hypothetical protein LNTAR_08364 [Lentisphaera araneosa HTCC2155]
          Length = 364

 Score = 68.6 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 67/183 (36%), Gaps = 5/183 (2%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YEK+       +  +A E++       P++  A  S+L    +Q        A S   + 
Sbjct: 104 YEKSGSSNFFGSSEEAIEFYEALIAQAPYSKGASTSMLRIGMLQQDDNDDIAAMSTYHKL 163

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           I  YP+S    Y    +       +R +  +    +     +   + +Y   P +  A+ 
Sbjct: 164 IATYPKSDEAGYARIYIAQFNIFSMRGIHGNLELMREAKTQLRLFINQYNKHPLLSEAKD 223

Query: 181 YVTVGRNQLAAKEVEIGRYYLK-RGEYVAAIPRFQL-VLANYSDAEH--AEEA-MARLVE 235
            +       A +   +  +YL       AA  R+   V+ +Y D E     EA + +L +
Sbjct: 224 QLASLEEVEAERTYNLALFYLDPVHSRPAAAKRYLYKVVVDYPDTEAAVVAEAKLEKLDK 283

Query: 236 AYV 238
           +Y 
Sbjct: 284 SYK 286


>gi|224826142|ref|ZP_03699245.1| tol-pal system protein YbgF [Lutiella nitroferrum 2002]
 gi|224601779|gb|EEG07959.1| tol-pal system protein YbgF [Lutiella nitroferrum 2002]
          Length = 258

 Score = 68.6 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 42/125 (33%), Gaps = 8/125 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+KA+  L+ ++F  A E   +     P A  A  ++        +  +Y  A  +   +
Sbjct: 142 YDKAIALLRNRDFPHATEALKRFIDQNPGAVEAVDAMYWLGVAHAAQRQYDAAIDIHRRF 201

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           + + P                 + I +   D     +    + R+++ Y  S     A+ 
Sbjct: 202 VERNPNHPKAPDAL--------RNIANCQRDLGQVDVAKATLHRLIKLYPKSAAAVKAKE 253

Query: 181 YVTVG 185
            +   
Sbjct: 254 QLKQM 258



 Score = 53.6 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 46/137 (33%), Gaps = 22/137 (16%)

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
             A        +  A    + +I Q P +       Y +G+++A         QR     
Sbjct: 143 DKAIALLRNRDFPHATEALKRFIDQNPGAVEAVDAMYWLGVAHAA--------QRQYDAA 194

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
           +    R VER  N P    A   +   +  L    V++ +         A + R   ++ 
Sbjct: 195 IDIHRRFVERNPNHPKAPDALRNIANCQRDLGQ--VDVAK---------ATLHR---LIK 240

Query: 219 NYSDAEHAEEAMARLVE 235
            Y  +  A +A  +L +
Sbjct: 241 LYPKSAAAVKAKEQLKQ 257



 Score = 40.1 bits (93), Expect = 0.31,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 41/114 (35%), Gaps = 14/114 (12%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
             + + R +++   +     A +++ V             +      +Y AAI   +  +
Sbjct: 157 ATEALKRFIDQNPGAVEAVDAMYWLGVA---------HAAQ-----RQYDAAIDIHRRFV 202

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
               +   A +A+  +      L  +D A+  +  + + YP+   A   +  +K
Sbjct: 203 ERNPNHPKAPDALRNIANCQRDLGQVDVAKATLHRLIKLYPKSAAAVKAKEQLK 256


>gi|194290405|ref|YP_002006312.1| periplasmic protein, associated to tol-pal complex [Cupriavidus
           taiwanensis LMG 19424]
 gi|193224240|emb|CAQ70249.1| periplasmic protein, associated to Tol-Pal complex [Cupriavidus
           taiwanensis LMG 19424]
          Length = 252

 Score = 68.6 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 16/126 (12%), Positives = 46/126 (36%), Gaps = 8/126 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A+   +  +F  A   F+   + +P +     +        Y+   Y+ +  + +  
Sbjct: 135 YDAALKQFQAGDFKSAGNSFSAFVKKYPQSPYLPLAQYWLGNSLYAQRDYKGSTFVLQNM 194

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +   P    V     ++ ++  Q+       Q+A     + + ++V +Y  +   + A  
Sbjct: 195 VNANPTHPKVPDA--MIAIANNQLESG----QKAA--ARKTLEQVVAKYPGTEGAQAASN 246

Query: 181 YVTVGR 186
            +   +
Sbjct: 247 RLKTLK 252



 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/140 (24%), Positives = 55/140 (39%), Gaps = 22/140 (15%)

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
            K    +A  Q+ AG ++ A +    ++ +YP+S  +    Y +G S          D +
Sbjct: 131 EKPEYDAALKQFQAGDFKSAGNSFSAFVKKYPQSPYLPLAQYWLGNSLYAQ-----RDYK 185

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
            +  +LQ M   V      P V  A   + +  NQL            + G+  AA    
Sbjct: 186 GSTFVLQNM---VNANPTHPKVPDA--MIAIANNQL------------ESGQKAAARKTL 228

Query: 214 QLVLANYSDAEHAEEAMARL 233
           + V+A Y   E A+ A  RL
Sbjct: 229 EQVVAKYPGTEGAQAASNRL 248



 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 42/119 (35%), Gaps = 14/119 (11%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K      S  V++Y  SPY+  A++++    N L          Y +R  Y  +   
Sbjct: 145 GDFKSAGNSFSAFVKKYPQSPYLPLAQYWLG---NSL----------YAQRD-YKGSTFV 190

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
            Q ++          +AM  +    +       AR+ +  +  +YP    A+     +K
Sbjct: 191 LQNMVNANPTHPKVPDAMIAIANNQLESGQKAAARKTLEQVVAKYPGTEGAQAASNRLK 249


>gi|218780988|ref|YP_002432306.1| tol-pal system protein YbgF [Desulfatibacillum alkenivorans AK-01]
 gi|218762372|gb|ACL04838.1| tol-pal system protein YbgF [Desulfatibacillum alkenivorans AK-01]
          Length = 302

 Score = 68.6 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 21/145 (14%), Positives = 51/145 (35%), Gaps = 8/145 (5%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
             +             + + Y +A     E    KA E F      FP +  A  +L   
Sbjct: 166 TQTEAQTAPVPAKELDEDQAYAQAKKDFDEMRLEKAREGFKNFLARFPNSSKADNALFWM 225

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
               +    Y++A    ++ I ++P++  V   Y+  G++++ +  +             
Sbjct: 226 GETFFKEKWYEKAILQYQDVIEKHPKANKVPAAYFKQGLAFSMLGDNSN--------ARL 277

Query: 161 YMSRIVERYTNSPYVKGARFYVTVG 185
             + +++++ NS     A+  +   
Sbjct: 278 IWTELIKKFPNSAEAGWAQKKLDAL 302



 Score = 54.0 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 44/120 (36%), Gaps = 14/120 (11%)

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
            +D+   +   +     + R+ NS     A F++              G  + K   Y  
Sbjct: 192 DFDEMRLEKAREGFKNFLARFPNSSKADNALFWM--------------GETFFKEKWYEK 237

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           AI ++Q V+  +  A     A  +   A+  L     AR + + + +++P    A + + 
Sbjct: 238 AILQYQDVIEKHPKANKVPAAYFKQGLAFSMLGDNSNARLIWTELIKKFPNSAEAGWAQK 297


>gi|218961350|ref|YP_001741125.1| hypothetical protein; putative signal peptide [Candidatus
           Cloacamonas acidaminovorans]
 gi|167730007|emb|CAO80919.1| hypothetical protein; putative signal peptide [Candidatus
           Cloacamonas acidaminovorans]
          Length = 976

 Score = 68.6 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 78/215 (36%), Gaps = 30/215 (13%)

Query: 46  VYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFA-GVARKSLLMSAFV 103
            YL    +   + E+Y      + +++N+++A     Q  R++  +  +  +   + A  
Sbjct: 342 TYLKQTPNELMKAELYYTLGYFYFQQKNYTEAIRQLGQA-RNYETSRELNSRIDFLIAEA 400

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG-MSYAQMIRDVPYDQRATKLMLQYM 162
            Y AG    A      Y+++YP     D  Y+ +G +S+ +         +         
Sbjct: 401 FYFAGNSNLAKDAFNRYLSRYPSGNKADKAYFYLGYLSFQE---------KDYTEAKNNF 451

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
             ++  Y  S Y   A +Y       LA  +  +  Y L   +Y+        +     +
Sbjct: 452 QELINLYPESFYCNEALYY-------LAEMDFYLANYNLALKKYL-------YLYEKNPE 497

Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
            E    A+ R+ + Y  +   D++   +  +   Y
Sbjct: 498 NEVI--AL-RIAQIYFYIGDYDQSENFLQNLVPNY 529



 Score = 51.7 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 66/211 (31%), Gaps = 42/211 (19%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM--SAFVQYSAGKYQQAASLGE 118
           Y + +  L ++N   A E      +  P      K+ L     +  +    Y +A     
Sbjct: 321 YLERLKLLFKKNPQNAIEQLQTYLKQTP--NELMKAELYYTLGYFYFQQKNYTEAIRQLG 378

Query: 119 EYITQYPESKN--------VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           +    Y  S+         +   +Y  G S                L     +R + RY 
Sbjct: 379 Q-ARNYETSRELNSRIDFLIAEAFYFAGNSN---------------LAKDAFNRYLSRYP 422

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
           +      A FY+                   +  +Y  A   FQ ++  Y ++ +  EA+
Sbjct: 423 SGNKADKAYFYLGYLS--------------FQEKDYTEAKNNFQELINLYPESFYCNEAL 468

Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             L E    LA  + A +    + E+ P+  
Sbjct: 469 YYLAEMDFYLANYNLALKKYLYLYEKNPENE 499



 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 38/273 (13%), Positives = 87/273 (31%), Gaps = 61/273 (22%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDS----VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           F IA  F        ++D +        +  +  +  +    L  +E+++++A   F + 
Sbjct: 395 FLIAEAFYFAGNSNLAKDAFNRYLSRYPSGNKADKAYFYLGYLSFQEKDYTEAKNNFQEL 454

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN-------VDYVYYL 136
              +P +    ++L   A + +    Y  A    ++Y+  Y ++         +  +Y+ 
Sbjct: 455 INLYPESFYCNEALYYLAEMDFYLANYNLAL---KKYLYLYEKNPENEVIALRIAQIYFY 511

Query: 137 VG----MSYAQMIRDVPYD-----------QRATKLMLQYM------------------S 163
           +G               YD           ++     L+                     
Sbjct: 512 IGDYDQSENFLQNLVPNYDICLLKGNIMLAKKNYSPALEQFLLAEGFATDNVRKIEAQSY 571

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQ--------LAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           R +  Y    +   +  Y+ + R +        LAAK     R      +Y  A+  +  
Sbjct: 572 RALCLYQMKRFKDASTLYLKLSREKESPDTYLFLAAKSAYAAR------DYHLALELYNN 625

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
            +  Y ++ H  EA+  +   Y  +   + A +
Sbjct: 626 FIDKYPESSHFLEALTDIANTYYNMGNYERAVD 658


>gi|73540501|ref|YP_295021.1| TPR repeat-containing protein [Ralstonia eutropha JMP134]
 gi|72117914|gb|AAZ60177.1| TPR repeat [Ralstonia eutropha JMP134]
          Length = 252

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 16/141 (11%), Positives = 49/141 (34%), Gaps = 8/141 (5%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
           V     T    ++  Y+ A+   +  +F  +   F    + +P +     +        Y
Sbjct: 120 VEGREGTVQPNEKPEYDAALKQFQAGDFKSSGNSFAAFVKKYPQSPYLPLAQYWLGNALY 179

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
           +   Y+ + ++ +  +   P          ++ ++  Q+       Q+A     + + ++
Sbjct: 180 AQRDYKGSTTVLQNMLQANPTHPKAPDA--MIAIANNQLESG----QKAA--ARKTLEQV 231

Query: 166 VERYTNSPYVKGARFYVTVGR 186
           V +Y  +   + A   +   +
Sbjct: 232 VAKYPGTEGAQAASNRLKTLK 252



 Score = 43.6 bits (102), Expect = 0.027,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 43/119 (36%), Gaps = 14/119 (11%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K      +  V++Y  SPY+  A++++    N L          Y +R  Y  +   
Sbjct: 145 GDFKSSGNSFAAFVKKYPQSPYLPLAQYWLG---NAL----------YAQRD-YKGSTTV 190

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
            Q +L        A +AM  +    +       AR+ +  +  +YP    A+     +K
Sbjct: 191 LQNMLQANPTHPKAPDAMIAIANNQLESGQKAAARKTLEQVVAKYPGTEGAQAASNRLK 249


>gi|189459860|ref|ZP_03008645.1| hypothetical protein BACCOP_00490 [Bacteroides coprocola DSM 17136]
 gi|189433470|gb|EDV02455.1| hypothetical protein BACCOP_00490 [Bacteroides coprocola DSM 17136]
          Length = 1007

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 71/220 (32%), Gaps = 46/220 (20%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                    +YE+   F++ ++   A + ++   + +P + ++R++      + Y   KY
Sbjct: 614 PESQYLDDALYEQGRAFVQLEDNDNAVKRYSLLVQRYPESPLSRRAANEIGLLYYQNDKY 673

Query: 111 QQAASLGEEYITQYPESKNV------------------DYVYYLVGMSYAQMIRDVPYD- 151
            +A +  ++ I+ YP S+                    DY+ ++  +           D 
Sbjct: 674 NEAIAAYKKVISTYPGSEEARLAQRDLKSIYIDLNRVDDYMAFVSTIPGGANFDVNERDS 733

Query: 152 -----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
                      +           R ++ +    +   A +Y+ +                
Sbjct: 734 LTYVAAERVYMRGNITEAKNSFVRYLQSFPQGAFSVDAHYYLGLID-------------- 779

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE-AYVA 239
                Y  A+     V+  Y D + + EAMA   + AY  
Sbjct: 780 YNEKNYTGAVSHLDKVVE-YPDNKFSGEAMAMCADIAYRE 818



 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 62/153 (40%), Gaps = 24/153 (15%)

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
             +Y +   L    IT +PES+ +D   Y  G ++ Q+  +           ++  S +V
Sbjct: 596 QREYGKKIELLNRLITGFPESQYLDDALYEQGRAFVQLEDN--------DNAVKRYSLLV 647

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
           +RY  SP  + A                EIG  Y +  +Y  AI  ++ V++ Y  +E A
Sbjct: 648 QRYPESPLSRRAAN--------------EIGLLYYQNDKYNEAIAAYKKVISTYPGSEEA 693

Query: 227 EEAMARLVEAYVALALMDEAREVVSLI--QERY 257
             A   L   Y+ L  +D+    VS I     +
Sbjct: 694 RLAQRDLKSIYIDLNRVDDYMAFVSTIPGGANF 726



 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 84/236 (35%), Gaps = 36/236 (15%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAAS 115
           ++        +  F  A EYF+Q  +        +++   + +     +Y   +Y  AAS
Sbjct: 435 LFRLGTQAFAQAAFENAIEYFSQSLQL---GRYNQQTQADAYYWRGESKYRLEQYGAAAS 491

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER--YTNSP 173
              +Y+   P+ ++ +Y     G++   +       Q+     L + +R  E      + 
Sbjct: 492 DYRQYLEFAPDRRSTEY-----GLALYNLGYTAFK-QKQYDKALTWFTRCAESGIRLEND 545

Query: 174 YVKGARFYVTVGR-------------NQLAAKEVEIGRYYL--------KRGEYVAAIPR 212
            V      +                  Q +   + +  Y L         + EY   I  
Sbjct: 546 VVADVYNRMGDCNFYARRFDAADAQYAQASGYSMSLSDYSLFQQSIIKGLQREYGKKIEL 605

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
              ++  + ++++ ++A+     A+V L   D A +  SL+ +RYP+   +R    
Sbjct: 606 LNRLITGFPESQYLDDALYEQGRAFVQLEDNDNAVKRYSLLVQRYPESPLSRRAAN 661



 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 52/151 (34%), Gaps = 23/151 (15%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           +    Y  A      ++ Q P++   D   Y++  +  ++              ++ +  
Sbjct: 42  FLRRDYAAAQQTLSRFVQQKPQASLADEAAYMIACTSYELKSP---------DCIKQLEG 92

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
            +E+Y +S Y    +                I   Y  + +Y  AI  F+    +     
Sbjct: 93  YLEQYPDSRYANRVQS--------------LIASAYFFQEKYPEAIACFKGCQFDLLADS 138

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQE 255
             +    R+  AY+ +  + EA    S+++E
Sbjct: 139 ERDACTLRMGTAYLKMGNLQEAAVWFSILKE 169



 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 82/262 (31%), Gaps = 49/262 (18%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR--KSLLMS 100
           S+ + L            Y +     + + +  A   + Q     P         +L   
Sbjct: 456 SQSLQLGRYNQQTQADAYYWRGESKYRLEQYGAAASDYRQYLEFAPDRRSTEYGLALYNL 515

Query: 101 AFVQYSAGKYQQAAS----LGEEYITQYPESKNVDYVYYLVG------------------ 138
            +  +   +Y +A +      E  I    E+  V  VY  +G                  
Sbjct: 516 GYTAFKQKQYDKALTWFTRCAESGIRL--ENDVVADVYNRMGDCNFYARRFDAADAQYAQ 573

Query: 139 -------MSYAQMIRD--VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
                  +S   + +   +   QR     ++ ++R++  +  S Y+  A           
Sbjct: 574 ASGYSMSLSDYSLFQQSIIKGLQREYGKKIELLNRLITGFPESQYLDDAL---------- 623

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
                E GR +++  +   A+ R+ L++  Y ++  +  A   +   Y      +EA   
Sbjct: 624 ----YEQGRAFVQLEDNDNAVKRYSLLVQRYPESPLSRRAANEIGLLYYQNDKYNEAIAA 679

Query: 250 VSLIQERYPQGYWARYVETLVK 271
              +   YP    AR  +  +K
Sbjct: 680 YKKVISTYPGSEEARLAQRDLK 701



 Score = 40.9 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 51/209 (24%), Gaps = 54/209 (25%)

Query: 75  KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
              +        +P +  A +   + A   +   KY +A +  +                
Sbjct: 85  DCIKQLEGYLEQYPDSRYANRVQSLIASAYFFQEKYPEAIACFKG--------------- 129

Query: 135 YLVGMSYAQMIRDVPYD------------QRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
                    ++ D   D                +    + S + E   +S Y   A +++
Sbjct: 130 -----CQFDLLADSERDACTLRMGTAYLKMGNLQEAAVWFSILKEV--SSEYHIDAVYHL 182

Query: 183 TVGRNQLAAKE--------------------VEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
                     +                      I   +L RG Y  A       L  Y  
Sbjct: 183 AYIDYVQKQYDKALQGFREAGESSKYAALSPYYIADIHLVRGNYQQARQIASTYLEAYPR 242

Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVS 251
            E A E      EA   L     A + +S
Sbjct: 243 QEKAIEMKRICGEACYGLKQYAAAIDYLS 271



 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 18/166 (10%), Positives = 46/166 (27%), Gaps = 22/166 (13%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
            Y     +   +  +Y+  + F     +S+A     + +       + + + L       
Sbjct: 272 AYRSETEEHAERNSLYKLGMSFFYTGVYSEAAAALGEVTTV--QDALTQNAYLHMGLAYL 329

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
              +  +A    E+      +    +  +Y   +   +               +    R 
Sbjct: 330 QLKERNRARMAFEQASAMNYDRDIKEQAFYNYALCIHETSYS------PFAESVTVFERF 383

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           +  + NS Y +    Y+                 Y+    Y+AA+ 
Sbjct: 384 LNEFPNSVYTEKVNDYLIEV--------------YMNTRSYMAALN 415


>gi|297171139|gb|ADI22150.1| uncharacterized protein conserved in bacteria [uncultured
           myxobacterium HF0200_19H16]
          Length = 283

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 18/135 (13%), Positives = 52/135 (38%), Gaps = 10/135 (7%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAG 108
           S T+      ++ +A+   ++  ++ A  +F++        +  A  +L      +++  
Sbjct: 151 SSTEDPAASLLFTQALGAYQKGKYNDAILFFDEFIRAFEESSKYA-DALYWLGECEFAKE 209

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
            Y  + +  + Y+   P+      V   +G+SY ++         A      +  +++ R
Sbjct: 210 NYGNSIAAYKRYLKLEPKGDKGADVLLKLGLSYERLH--------AFNEAAVFFKKLLLR 261

Query: 169 YTNSPYVKGARFYVT 183
           +  S     A+ ++ 
Sbjct: 262 FPGSALADLAKAHLK 276



 Score = 44.3 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 39/135 (28%), Gaps = 27/135 (20%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y  GKY  A    +E+I  + ES       Y +G                    +    R
Sbjct: 169 YQKGKYNDAILFFDEFIRAFEESSKYADALYWLGECEFAK--------ENYGNSIAAYKR 220

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
            ++              + +   +L                +  A   F+ +L  +  + 
Sbjct: 221 YLKLEPKGDKGADVLLKLGLSYERL--------------HAFNEAAVFFKKLLLRFPGS- 265

Query: 225 HAEEAMARLVEAYVA 239
               A+A L +A++ 
Sbjct: 266 ----ALADLAKAHLK 276



 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 37/115 (32%), Gaps = 14/115 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             + +    +  +  S     A +++          E     Y    G  +AA  R+   
Sbjct: 176 DAILFFDEFIRAFEESSKYADALYWLGEC-------EFAKENY----GNSIAAYKRY--- 221

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           L      +   + + +L  +Y  L   +EA      +  R+P    A   +  +K
Sbjct: 222 LKLEPKGDKGADVLLKLGLSYERLHAFNEAAVFFKKLLLRFPGSALADLAKAHLK 276


>gi|297569166|ref|YP_003690510.1| hypothetical protein [Desulfurivibrio alkaliphilus AHT2]
 gi|296925081|gb|ADH85891.1| Tetratricopeptide TPR_4 [Desulfurivibrio alkaliphilus AHT2]
          Length = 703

 Score = 67.8 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/220 (20%), Positives = 85/220 (38%), Gaps = 42/220 (19%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS------AGKYQ 111
           +E+++ AV   + +++ +A   F +  R+ P +  A ++L  +A ++           ++
Sbjct: 60  QELWQSAVGAAEREDWRRAAIDFERLHREHPTSPFAEEALWRAATLRKKIAATEPDPDWE 119

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           +   L   +  +YP+S   +  Y  +G+++ +M        R  +  L Y    VERY +
Sbjct: 120 RIRDLFRRFTVEYPDSPQAEEAYLEMGIAHFKM--------RFLREALTYFRLFVERYPD 171

Query: 172 SPYVKGAR----------FYVTVGRNQLAAKEV--------------EIGRYYLKRGEYV 207
           S  V  AR            V         KE+               +G  Y ++G Y 
Sbjct: 172 SELVPRARHWQARTLIEVARVDEAIEIF--KELTEEPELAFRLEVMTNLGLAYDQQGAYW 229

Query: 208 AAIPRFQLVLANYSDAEH--AEEAMARLVEAYVALALMDE 245
            A+  FQ +     +  H    E +  L +AY  +    E
Sbjct: 230 EALATFQELQRVAPEEYHLQNPEFLLLLGQAYFRVGREQE 269


>gi|150010168|ref|YP_001304911.1| TPR domain-containing protein [Parabacteroides distasonis ATCC
           8503]
 gi|149938592|gb|ABR45289.1| TPR-domain containing protein [Parabacteroides distasonis ATCC
           8503]
          Length = 999

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/239 (12%), Positives = 72/239 (30%), Gaps = 45/239 (18%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
               + +   + ++  ++KA   +     +       +   +     +  +   +Y +A 
Sbjct: 466 NDAYFWRGESYYRQGEYNKAISDYRTYLNNTRQRNTDMYALAHYNLGYSYFKLKEYGEAL 525

Query: 115 SLGEEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM-------------- 158
           +   +Y+      ++      Y  +G       +    ++  T+                
Sbjct: 526 NRFRQYVNLESNQQTPAYADAYNRIGDCLFHNRQFAMAEENYTRAAQLQPSAGDYSVYQK 585

Query: 159 -------------LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
                        +  M R++  +  S YV  A                E GR Y+    
Sbjct: 586 GFLLGLQKDYKGKISVMDRLIREFPESQYVDDAL--------------FEKGRSYVLLDN 631

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
             AA   F+ ++ ++  +  A +A  +L   Y      ++A +    +   YP    A+
Sbjct: 632 NQAAAASFEQLMRDFPQSSLARKAGVQLGLIYFNDNQPEKAADAYKSVISNYPGSEEAK 690



 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/268 (17%), Positives = 95/268 (35%), Gaps = 57/268 (21%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
             I +C +VG    S +  Y            ++ +       +N+S   +      +  
Sbjct: 4   ILIPLCLVVGSHMASGQRSY-----QFDAPNRLFVEGKELFSLKNYSGCIDKLEAYKQHS 58

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM--- 144
             A + +++  M  +  Y  G+   A  L ++Y+  YP S++ D V +L+G ++      
Sbjct: 59  TDADLIQEADYMLVYSAYEQGR-PNAVELLKDYLDVYPASRHADEVNFLIGSAHFGQGEY 117

Query: 145 -----------IRDVPYDQRAT---------------KLMLQYMSRIVERYTNSPYVKGA 178
                      I  +  +Q+                 +    Y +RI +    + Y + +
Sbjct: 118 QKAIFWFNESNIDMLSPEQQEAYCFRLAYSLLQIGDMEKARGYFARIEQI--GTKYREAS 175

Query: 179 RFYVTVG-------RNQLAA----KEV---------EIGRYYLKRGEYVAAIPRFQLVLA 218
            +YV           N L      K++          I + Y  + +Y   I   + +LA
Sbjct: 176 TYYVAYIDYATGKYNNALVEFTRLKDLPDYKERSLCYITQIYFIQNKYEKVISEGKELLA 235

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEA 246
           +Y D+E+  E    +  AY  L   D+A
Sbjct: 236 SYPDSENNSEVYRIMGNAYYHLGNEDQA 263



 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 76/216 (35%), Gaps = 33/216 (15%)

Query: 46  VYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFP----FAGVARKSLLMS 100
           V L+S        + Y +        + F+ A E + + ++  P    ++   +  LL  
Sbjct: 532 VNLESNQQTPAYADAYNRIGDCLFHNRQFAMAEENYTRAAQLQPSAGDYSVYQKGFLLGL 591

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
                    Y+   S+ +  I ++PES+ VD   +  G SY  +  +        +    
Sbjct: 592 ------QKDYKGKISVMDRLIREFPESQYVDDALFEKGRSYVLLDNN--------QAAAA 637

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
              +++  +  S   + A   + +               Y    +   A   ++ V++NY
Sbjct: 638 SFEQLMRDFPQSSLARKAGVQLGLI--------------YFNDNQPEKAADAYKSVISNY 683

Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
             +E A+ A+  L   Y+ L  ++      + +   
Sbjct: 684 PGSEEAKVALQDLKSVYIELNDINSFAAYANSLGGN 719



 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 76/234 (32%), Gaps = 36/234 (15%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-KSLLMSAFVQYSAGKYQQAASLGE 118
           +++            KA + F++      +   +R  +        Y  G+Y +A S   
Sbjct: 431 LFQLGTQAFTNMELDKAVDLFSRAISLGAYNLESRNDAYFWRGESYYRQGEYNKAISDYR 490

Query: 119 EYITQYPESKNVD-YVY--YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SP 173
            Y+      +N D Y    Y +G SY ++        +     L    + V   +N  +P
Sbjct: 491 TYLN-NTRQRNTDMYALAHYNLGYSYFKL--------KEYGEALNRFRQYVNLESNQQTP 541

Query: 174 YVKGARFYVTVG-------------RNQLAAKEVEIGRY--YLK------RGEYVAAIPR 212
               A   +                  + A  +   G Y  Y K      + +Y   I  
Sbjct: 542 AYADAYNRIGDCLFHNRQFAMAEENYTRAAQLQPSAGDYSVYQKGFLLGLQKDYKGKISV 601

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
              ++  + ++++ ++A+     +YV L     A      +   +PQ   AR  
Sbjct: 602 MDRLIREFPESQYVDDALFEKGRSYVLLDNNQAAAASFEQLMRDFPQSSLARKA 655



 Score = 41.6 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 49/167 (29%), Gaps = 32/167 (19%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S TD   + ++Y   V +  + N+S A     +  R+     +++ + L           
Sbjct: 272 SSTDSPLRGDLYILGVCYYNKGNYSSAVNALGRTVREN--DALSQNAYLYLGQSYLKLKD 329

Query: 110 YQQAASLGE-----EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
              A    E      +     + K      Y    +YA +I +  +        +     
Sbjct: 330 KNNARMAFEAAATSSFDK---QVKEA--AMY----NYALLIHETAF--TGFGESVTIFED 378

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
            +  + NS Y      Y+                 YL    Y AA+ 
Sbjct: 379 FLNDFPNSKYADKVNDYLVEV--------------YLTTKNYQAALN 411


>gi|325998244|gb|ADZ50452.1| competence lipoprotein [Helicobacter pylori 2017]
          Length = 166

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 64/165 (38%), Gaps = 6/165 (3%)

Query: 18  QLYKFALTIFFSIAVCFLV-GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
           +L  F + +F ++A+  +  G   +  +    +           Y+  +  +   N   A
Sbjct: 2   RLKHFKIFLFIAMAMIVIGTGCANKKKKKDEYNKPAIFW-----YQGILREILFANLETA 56

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
             Y++    +   + +  +++L          +Y  A+   +EYI ++    NVDY+ +L
Sbjct: 57  DNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVDYLTFL 116

Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              S+    ++   DQ      +  +   +E+Y NS Y     + 
Sbjct: 117 KLQSHYYAFKNHSKDQEFISNAIVSLGEFIEKYPNSRYRPYVEYM 161


>gi|116748203|ref|YP_844890.1| TPR repeat-containing protein [Syntrophobacter fumaroxidans MPOB]
 gi|116697267|gb|ABK16455.1| Tetratricopeptide TPR_2 repeat protein [Syntrophobacter
           fumaroxidans MPOB]
          Length = 264

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 48/126 (38%), Gaps = 8/126 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YEKA    +   +  A + F      +P + +A  +L       +S  +YQ A  + ++ 
Sbjct: 147 YEKATRAYQSGKYEVARKEFQSFLSKYPKSELADNALFTVGECYFSEKRYQDAIEVYQQV 206

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           + QYP    V       G ++ Q+          +        R+VE+Y  +P  + A  
Sbjct: 207 LDQYPRGNKVPNALLKQGTAFQQL--------GDSTAARILYERLVEKYPGTPQAQAAEK 258

Query: 181 YVTVGR 186
            +   R
Sbjct: 259 KLKQMR 264



 Score = 56.7 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 38/116 (32%), Gaps = 14/116 (12%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           ++  +     + +Y  S     A                 +G  Y     Y  AI  +Q 
Sbjct: 160 EVARKEFQSFLSKYPKSELADNAL--------------FTVGECYFSEKRYQDAIEVYQQ 205

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           VL  Y        A+ +   A+  L     AR +   + E+YP    A+  E  +K
Sbjct: 206 VLDQYPRGNKVPNALLKQGTAFQQLGDSTAARILYERLVEKYPGTPQAQAAEKKLK 261



 Score = 38.6 bits (89), Expect = 0.90,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 2/71 (2%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            + G+Y  A   FQ  L+ Y  +E A+ A+  + E Y +     +A EV   + ++YP+G
Sbjct: 154 YQSGKYEVARKEFQSFLSKYPKSELADNALFTVGECYFSEKRYQDAIEVYQQVLDQYPRG 213

Query: 261 YWARYVETLVK 271
              +    L+K
Sbjct: 214 N--KVPNALLK 222


>gi|194333587|ref|YP_002015447.1| tol-pal system protein YbgF [Prosthecochloris aestuarii DSM 271]
 gi|194311405|gb|ACF45800.1| tol-pal system protein YbgF [Prosthecochloris aestuarii DSM 271]
          Length = 258

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 49/135 (36%), Gaps = 8/135 (5%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
                 R  R +++  +    E ++++A + F+     +P + +A  +   +A   Y+  
Sbjct: 132 PVTAGSRDDRALFDAGMNAFNEYDYAEARKEFSALLSAYPQSALADDAQYYTAETYYNEK 191

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
            Y++A    +  I +YPE       Y+  G+S+  +                    +++ 
Sbjct: 192 WYEKAILEYQLVIEKYPEGDKRPAAYFKQGLSFENI--------GDATNAGVRYKELIQL 243

Query: 169 YTNSPYVKGARFYVT 183
           Y +S         + 
Sbjct: 244 YPDSNEAGIVGPKLQ 258



 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 30/105 (28%), Gaps = 14/105 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              +  S ++  Y  S     A+                    Y     Y  AI  +QLV
Sbjct: 158 EARKEFSALLSAYPQSALADDAQ--------------YYTAETYYNEKWYEKAILEYQLV 203

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +  Y + +    A  +   ++  +     A      + + YP   
Sbjct: 204 IEKYPEGDKRPAAYFKQGLSFENIGDATNAGVRYKELIQLYPDSN 248


>gi|325923405|ref|ZP_08185070.1| tol-pal system protein YbgF [Xanthomonas gardneri ATCC 19865]
 gi|325546120|gb|EGD17309.1| tol-pal system protein YbgF [Xanthomonas gardneri ATCC 19865]
          Length = 274

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 45/135 (33%), Gaps = 8/135 (5%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           T    +R  Y  A   LK   +  A + F      +P       +L       Y+   +Q
Sbjct: 142 TASNEERTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQ 201

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            A +   + + +YP           +G+S     ++            Q + ++V +Y  
Sbjct: 202 LAEAQFRDLVGRYPTHDKAAGGLLKLGLSQYGEGKN--------DEAQQTLQQVVSQYPG 253

Query: 172 SPYVKGARFYVTVGR 186
           S   + A+  +   R
Sbjct: 254 SDAARVAQERLQSIR 268



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 41/115 (35%), Gaps = 14/115 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              Q     +E Y N  Y   A +++              G  Y     +  A  +F+ +
Sbjct: 165 DASQLFLSFLELYPNGVYTPNALYWL--------------GESYYATRNFQLAEAQFRDL 210

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           +  Y   + A   + +L  +       DEA++ +  +  +YP    AR  +  ++
Sbjct: 211 VGRYPTHDKAAGGLLKLGLSQYGEGKNDEAQQTLQQVVSQYPGSDAARVAQERLQ 265



 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 23/58 (39%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           LK G+Y  A   F   L  Y +  +   A+  L E+Y A      A      +  RYP
Sbjct: 158 LKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVGRYP 215


>gi|158522219|ref|YP_001530089.1| Tol-Pal system YbgF [Desulfococcus oleovorans Hxd3]
 gi|158511045|gb|ABW68012.1| Tol-Pal system YbgF [Desulfococcus oleovorans Hxd3]
          Length = 275

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 46/128 (35%), Gaps = 8/128 (6%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
             +Y  A    ++ N+  A + F +    FP + +A  +        +    Y++A    
Sbjct: 156 ERLYGMARQHYEQGNYDAARKGFEELIARFPKSDLADNARFWIGESYFREKWYEKAILEY 215

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           ++ I  YP    V       G++++ +          T      ++++V+++  S   K 
Sbjct: 216 QKAIDDYPRGNKVPAALLKQGIAFSYI--------GKTTEARVVLNKLVKQFPGSSDAKI 267

Query: 178 ARFYVTVG 185
               +   
Sbjct: 268 GEQKLAEL 275



 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 42/115 (36%), Gaps = 14/115 (12%)

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
           Y+Q       +    ++ R+  S     AR                IG  Y +   Y  A
Sbjct: 166 YEQGNYDAARKGFEELIARFPKSDLADNAR--------------FWIGESYFREKWYEKA 211

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
           I  +Q  + +Y        A+ +   A+  +    EAR V++ + +++P    A+
Sbjct: 212 ILEYQKAIDDYPRGNKVPAALLKQGIAFSYIGKTTEARVVLNKLVKQFPGSSDAK 266


>gi|77918025|ref|YP_355840.1| hypothetical protein Pcar_0410 [Pelobacter carbinolicus DSM 2380]
 gi|77544108|gb|ABA87670.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
          Length = 222

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 14/105 (13%)

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
               ++ +  + Y   A+F++                 Y   G+Y  A+  FQ V+ NY 
Sbjct: 128 FESFLDHFPANNYAGNAQFWLGEC--------------YYNLGQYDRAVQEFQKVVDNYP 173

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
            +  A EA+ R+  A   L   ++AR+ +  +Q+RYP    AR  
Sbjct: 174 LSGKAPEALLRMAPALRQLNQYEKARQALQALQQRYPNSAAARKA 218



 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 42/123 (34%), Gaps = 8/123 (6%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
              ++Y KA        + +  + F      FP    A  +        Y+ G+Y +A  
Sbjct: 104 SATKIYLKAFGDYASGRYHQGIKGFESFLDHFPANNYAGNAQFWLGECYYNLGQYDRAVQ 163

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
             ++ +  YP S         +  +  Q+ +         +   Q +  + +RY NS   
Sbjct: 164 EFQKVVDNYPLSGKAPEALLRMAPALRQLNQ--------YEKARQALQALQQRYPNSAAA 215

Query: 176 KGA 178
           + A
Sbjct: 216 RKA 218



 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 44/130 (33%), Gaps = 22/130 (16%)

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           AF  Y++G+Y Q     E ++  +P +       + +G  Y  +              +Q
Sbjct: 112 AFGDYASGRYHQGIKGFESFLDHFPANNYAGNAQFWLGECYYNL--------GQYDRAVQ 163

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
              ++V+ Y  S     A   +     QL               +Y  A    Q +   Y
Sbjct: 164 EFQKVVDNYPLSGKAPEALLRMAPALRQL--------------NQYEKARQALQALQQRY 209

Query: 221 SDAEHAEEAM 230
            ++  A +AM
Sbjct: 210 PNSAAARKAM 219



 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 22/55 (40%)

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           G Y   I  F+  L ++    +A  A   L E Y  L   D A +    + + YP
Sbjct: 119 GRYHQGIKGFESFLDHFPANNYAGNAQFWLGECYYNLGQYDRAVQEFQKVVDNYP 173


>gi|256838989|ref|ZP_05544499.1| TPR-domain-containing protein [Parabacteroides sp. D13]
 gi|298374536|ref|ZP_06984494.1| TPR-domain containing protein [Bacteroides sp. 3_1_19]
 gi|256739908|gb|EEU53232.1| TPR-domain-containing protein [Parabacteroides sp. D13]
 gi|298268904|gb|EFI10559.1| TPR-domain containing protein [Bacteroides sp. 3_1_19]
          Length = 999

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/239 (12%), Positives = 72/239 (30%), Gaps = 45/239 (18%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
               + +   + ++  ++KA   +     +       +   +     +  +   +Y +A 
Sbjct: 466 NDAYFWRGESYYRQGEYNKAISDYRTYLNNTRQRNTDMYALAHYNLGYSYFKLKEYGEAL 525

Query: 115 SLGEEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM-------------- 158
           +   +Y+      ++      Y  +G       +    ++  T+                
Sbjct: 526 NRFRQYVNLESNQQTPAYADAYNRIGDCLFHNRQFAMAEENYTRAAQLQPSAGDYSVYQK 585

Query: 159 -------------LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
                        +  M R++  +  S YV  A                E GR Y+    
Sbjct: 586 GFLLGLQKDYKGKISVMDRLIREFPESQYVDDAL--------------FEKGRSYVLLDN 631

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
             AA   F+ ++ ++  +  A +A  +L   Y      ++A +    +   YP    A+
Sbjct: 632 NQAAAASFEQLMRDFPQSSLARKAGVQLGLIYFNDNQPEKAADAYKSVISNYPGSEEAK 690



 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 94/268 (35%), Gaps = 57/268 (21%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
             I +C +VG    S +  Y            ++ +       +N+S   +      +  
Sbjct: 4   ILIPLCLVVGSHMASGQRSY-----QFDAPNRLFVEGKELFSLKNYSGCIDKLEAYKQHS 58

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM--- 144
             A + +++  M  +  Y  G+   A  L ++Y+  YP S++ D V +L+G ++      
Sbjct: 59  TDADLIQEADYMLVYSAYEQGR-PNAVELLKDYLDVYPASRHADEVNFLIGSAHFGQGEY 117

Query: 145 -----------IRDVPYDQRAT---------------KLMLQYMSRIVERYTNSPYVKGA 178
                      I  +  +Q+                 +    Y +RI +    + Y + +
Sbjct: 118 QKAIFWFNESNIDMLSPEQQEAYCFRLAYSLLQIGDMEKARGYFARIEQI--GTKYREAS 175

Query: 179 RFYVTVG-------RNQLAA----------KE---VEIGRYYLKRGEYVAAIPRFQLVLA 218
            +YV           N L            KE     I + Y  + +Y   I   + +LA
Sbjct: 176 TYYVAYIDYATGKYNNALVEFTRLKDLPDYKERSLYYITQIYFIQNKYEKVISEGKELLA 235

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEA 246
           +Y D+E+  E    +  AY  L   D+A
Sbjct: 236 SYPDSENNSEVYRIMGNAYYHLGNEDQA 263



 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 76/216 (35%), Gaps = 33/216 (15%)

Query: 46  VYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFP----FAGVARKSLLMS 100
           V L+S        + Y +        + F+ A E + + ++  P    ++   +  LL  
Sbjct: 532 VNLESNQQTPAYADAYNRIGDCLFHNRQFAMAEENYTRAAQLQPSAGDYSVYQKGFLLGL 591

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
                    Y+   S+ +  I ++PES+ VD   +  G SY  +  +        +    
Sbjct: 592 ------QKDYKGKISVMDRLIREFPESQYVDDALFEKGRSYVLLDNN--------QAAAA 637

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
              +++  +  S   + A   + +               Y    +   A   ++ V++NY
Sbjct: 638 SFEQLMRDFPQSSLARKAGVQLGLI--------------YFNDNQPEKAADAYKSVISNY 683

Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
             +E A+ A+  L   Y+ L  ++      + +   
Sbjct: 684 PGSEEAKVALQDLKSVYIELNDINSFAAYANSLGGN 719



 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 76/234 (32%), Gaps = 36/234 (15%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-KSLLMSAFVQYSAGKYQQAASLGE 118
           +++            KA + F++      +   +R  +        Y  G+Y +A S   
Sbjct: 431 LFQLGTQAFTNMELDKAVDLFSRAISLGAYNLESRNDAYFWRGESYYRQGEYNKAISDYR 490

Query: 119 EYITQYPESKNVD-YVY--YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SP 173
            Y+      +N D Y    Y +G SY ++        +     L    + V   +N  +P
Sbjct: 491 TYLN-NTRQRNTDMYALAHYNLGYSYFKL--------KEYGEALNRFRQYVNLESNQQTP 541

Query: 174 YVKGARFYVTVG-------------RNQLAAKEVEIGRY--YLK------RGEYVAAIPR 212
               A   +                  + A  +   G Y  Y K      + +Y   I  
Sbjct: 542 AYADAYNRIGDCLFHNRQFAMAEENYTRAAQLQPSAGDYSVYQKGFLLGLQKDYKGKISV 601

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
              ++  + ++++ ++A+     +YV L     A      +   +PQ   AR  
Sbjct: 602 MDRLIREFPESQYVDDALFEKGRSYVLLDNNQAAAASFEQLMRDFPQSSLARKA 655



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 49/167 (29%), Gaps = 32/167 (19%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S TD   + ++Y   V +  + N+S A     +  R+     +++ + L           
Sbjct: 272 SSTDSPLRGDLYILGVCYYNKGNYSSAVNALGRTVREN--DALSQNAYLYLGQSYLKLKD 329

Query: 110 YQQAASLGE-----EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
              A    E      +     + K      Y    +YA +I +  +        +     
Sbjct: 330 KNNARMAFEAAATSSFDK---QVKEA--AMY----NYALLIHETAF--TGFGESVTIFED 378

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
            +  + NS Y      Y+                 YL    Y AA+ 
Sbjct: 379 FLNDFPNSKYADKVNDYLVEV--------------YLTTKNYQAALN 411


>gi|294661410|ref|YP_003573286.1| hypothetical protein Aasi_1962 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|227336561|gb|ACP21158.1| hypothetical protein Aasi_1962 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 1031

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 68/220 (30%), Gaps = 31/220 (14%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D       Y+KA+++     F +A +         P      K+L   A++     +
Sbjct: 575 KTEDNYPAHNRYQKALIYGLLGKFVEAKQNLESIINTCPHTAYYEKALFEYAYLALQHQE 634

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y  A      +I + P S  V        ++   +        +      +    +++ Y
Sbjct: 635 YDLAIKSFTNFIQKKPYSTLVPDALLHRAVAKVNL--------KQYAEAGKDYETLLKDY 686

Query: 170 TNSPYVKGARFYVTVGR-----------------------NQLAAKEVEIGRYYLKRGEY 206
              P  + A   +                             LAA   E  +       Y
Sbjct: 687 PTHPNAQSALLELPNLVVQEGKPEKLQQYLASYKAANPSSETLAAISFEAAKNLFYSQNY 746

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
             A+ + +  + +Y ++   +EA   + EAY  LA  ++A
Sbjct: 747 TPAVQQLKEFITSYPNSTLIDEANFLIAEAYYRLAEDEQA 786



 Score = 49.3 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 62/213 (29%), Gaps = 30/213 (14%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQY 105
           D      YQ  +Y    +    + +  A   F Q                 L+ +A   Y
Sbjct: 502 DKKNTNYYQDALYGLGYVLFNTEKYKAALPLFLQYINIPNITNDNNWRLDVLVRTADCYY 561

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
           +   Y +A  L  +    YP         Y   + Y  + + V           Q +  I
Sbjct: 562 AIKDYHKALDLYTKTEDNYPAHNR-----YQKALIYGLLGKFV--------EAKQNLESI 608

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           +    ++ Y + A F                    L+  EY  AI  F   +     +  
Sbjct: 609 INTCPHTAYYEKALFEYAYLA--------------LQHQEYDLAIKSFTNFIQKKPYSTL 654

Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
             +A+     A V L    EA +    + + YP
Sbjct: 655 VPDALLHRAVAKVNLKQYAEAGKDYETLLKDYP 687



 Score = 49.0 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 85/218 (38%), Gaps = 28/218 (12%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           +E A      QN++ A +   +    +P + +  ++  + A   Y   + +QA       
Sbjct: 734 FEAAKNLFYSQNYTPAVQQLKEFITSYPNSTLIDEANFLIAEAYYRLAEDEQAL------ 787

Query: 121 ITQYPESKNVDYVYYLV-----------------GMSYAQMIRDVPYDQRATKLMLQYMS 163
           I  +  SKN    +Y                    +++ + +++   +++ T   L+ + 
Sbjct: 788 IQYHITSKNKQTPFYNRILLRIASLAYKHKDFNTALTHYKQLKESASNKKETYYALEGIM 847

Query: 164 RIVERYTNSPYVKGARFYVT----VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
           +  +       V  A   +     +  N ++   + +G+  LK+ +Y  A   F+ ++ N
Sbjct: 848 KTSDALQQYEEVNKAASQIINQGNITINAVSQAALYLGKTALKQAKYQEAHEHFKQIVKN 907

Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
             D  +A EA   +   Y  L    ++ E + ++ +++
Sbjct: 908 GQDM-YAAEAQYLIAYTYYQLREFKQSLEALFILNKQF 944



 Score = 40.5 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 68/209 (32%), Gaps = 14/209 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y    +  + + F  A  Y        P         L++A   +    Y  A    E Y
Sbjct: 218 YMIMEVLYQAKRFQAAINYIKDVQTKQPTLKNYEDIELLTAESYFFLKDYASATRHYENY 277

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ--YMSRIVERYTNSPYVKGA 178
           I   P S+    V+Y +  S  +   +    +   +L LQ  Y++++   Y    Y+K +
Sbjct: 278 IHLQP-SEVTHEVFYRLAYSLYKSGENYKALKYLKELALQDDYLAQLASYYMGLIYIKTS 336

Query: 179 RF-----------YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
           +             +            +  +   + G+   +I   Q    +Y ++ H  
Sbjct: 337 QKNLALAAFDQARQMNFINEIQTEASFQYAQLSYELGKLTISIDALQKFKRSYPNSPHIT 396

Query: 228 EAMARLVEAYVALALMDEAREVVSLIQER 256
                L + Y      D A   +  +QE+
Sbjct: 397 TVDQLLSQVYFHTNHYDLAIAHIESLQEK 425


>gi|238756014|ref|ZP_04617338.1| hypothetical protein yruck0001_31450 [Yersinia ruckeri ATCC 29473]
 gi|238705739|gb|EEP98132.1| hypothetical protein yruck0001_31450 [Yersinia ruckeri ATCC 29473]
          Length = 259

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 49/137 (35%), Gaps = 9/137 (6%)

Query: 50  SVTDVRYQREVYEKAVL-FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           +      +   Y  AV   L+++ + +A   F    + +P +     +      + Y+ G
Sbjct: 131 APASTGDENSDYNAAVSLALEKKQYDQAITAFQGFVKQYPKSTYQPNANYWLGQLYYNKG 190

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           K   AA      +  YP+S       Y VG+   +  +                 +++++
Sbjct: 191 KKDDAAYYYAVVVKNYPKSPKSADAMYKVGVIMQEKGQG--------DKAKAVYQQVIKQ 242

Query: 169 YTNSPYVKGARFYVTVG 185
           Y N+   K A+  ++  
Sbjct: 243 YPNTETAKQAQKRLSAL 259



 Score = 54.4 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 49/129 (37%), Gaps = 14/129 (10%)

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           S       +  +++     +      V++Y  S Y   A +++              G+ 
Sbjct: 140 SDYNAAVSLALEKKQYDQAITAFQGFVKQYPKSTYQPNANYWL--------------GQL 185

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           Y  +G+   A   + +V+ NY  +  + +AM ++          D+A+ V   + ++YP 
Sbjct: 186 YYNKGKKDDAAYYYAVVVKNYPKSPKSADAMYKVGVIMQEKGQGDKAKAVYQQVIKQYPN 245

Query: 260 GYWARYVET 268
              A+  + 
Sbjct: 246 TETAKQAQK 254



 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 48/126 (38%), Gaps = 22/126 (17%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +Y QA +  + ++ QYP+S       Y +G  Y    +              Y + +V+
Sbjct: 153 KQYDQAITAFQGFVKQYPKSTYQPNANYWLGQLYYNKGKKDD--------AAYYYAVVVK 204

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y  SP    A + V V                 ++G+   A   +Q V+  Y + E A+
Sbjct: 205 NYPKSPKSADAMYKVGVIMQ--------------EKGQGDKAKAVYQQVIKQYPNTETAK 250

Query: 228 EAMARL 233
           +A  RL
Sbjct: 251 QAQKRL 256


>gi|301308217|ref|ZP_07214171.1| TPR-domain containing protein [Bacteroides sp. 20_3]
 gi|300833687|gb|EFK64303.1| TPR-domain containing protein [Bacteroides sp. 20_3]
          Length = 999

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/239 (12%), Positives = 72/239 (30%), Gaps = 45/239 (18%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
               + +   + ++  ++KA   +     +       +   +     +  +   +Y +A 
Sbjct: 466 NDAYFWRGESYYRQGEYNKAISDYRTYLNNTRQRNTDMYALAHYNLGYSYFKLKEYGEAL 525

Query: 115 SLGEEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM-------------- 158
           +   +Y+      ++      Y  +G       +    ++  T+                
Sbjct: 526 NRFRQYVNLESNQQTPAYADAYNRIGDCLFHNRQFAMAEENYTRAAQLQPSAGDYSVYQK 585

Query: 159 -------------LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
                        +  M R++  +  S YV  A                E GR Y+    
Sbjct: 586 GFLLGLQKDYKGKISVMDRLIREFPESQYVDDAL--------------FEKGRSYVLLDN 631

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
             AA   F+ ++ ++  +  A +A  +L   Y      ++A +    +   YP    A+
Sbjct: 632 NQAAAASFEQLMRDFPQSSLARKAGVQLGLIYFNDNQPEKAADAYKSVISNYPGSEEAK 690



 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 94/268 (35%), Gaps = 57/268 (21%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
             I +C +VG    S +  Y            ++ +       +N+S   +      +  
Sbjct: 4   ILIPLCLVVGSHMASGQRSY-----QFDAPNRLFVEGKELFSLKNYSGCIDKLEAYKQHS 58

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA----- 142
             A + +++  M  +  Y  G+   A  L ++Y+  YP S++ D V +L+G ++      
Sbjct: 59  TDADLIQEADYMLVYSAYEQGRL-NAVELLKDYLDVYPASRHADEVNFLIGSAHFGLGEY 117

Query: 143 ---------QMIRDVPYDQRAT---------------KLMLQYMSRIVERYTNSPYVKGA 178
                      I  +  +Q+                 +    Y +RI +    + Y + +
Sbjct: 118 QKAIFWFNESNIDMLSPEQQEAYCFRLAYSLLQTGDMEKARGYFARIEQI--GTKYREAS 175

Query: 179 RFYVTVG-------RNQLAA----------KE---VEIGRYYLKRGEYVAAIPRFQLVLA 218
            +YV           N L            KE     I + Y  + +Y   I   + +LA
Sbjct: 176 TYYVAYIDYATGKYNNALVEFTRLKDLSDYKERSLYYITQIYFIQNKYEKVISEGKELLA 235

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEA 246
           +Y D+E+  E    +  AY  L   D+A
Sbjct: 236 SYPDSENNSEVYRIMGNAYYHLGNEDQA 263



 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 76/216 (35%), Gaps = 33/216 (15%)

Query: 46  VYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFP----FAGVARKSLLMS 100
           V L+S        + Y +        + F+ A E + + ++  P    ++   +  LL  
Sbjct: 532 VNLESNQQTPAYADAYNRIGDCLFHNRQFAMAEENYTRAAQLQPSAGDYSVYQKGFLLGL 591

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
                    Y+   S+ +  I ++PES+ VD   +  G SY  +  +        +    
Sbjct: 592 ------QKDYKGKISVMDRLIREFPESQYVDDALFEKGRSYVLLDNN--------QAAAA 637

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
              +++  +  S   + A   + +               Y    +   A   ++ V++NY
Sbjct: 638 SFEQLMRDFPQSSLARKAGVQLGLI--------------YFNDNQPEKAADAYKSVISNY 683

Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
             +E A+ A+  L   Y+ L  ++      + +   
Sbjct: 684 PGSEEAKVALQDLKSVYIELNDINSFAAYANSLGGN 719



 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 76/234 (32%), Gaps = 36/234 (15%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-KSLLMSAFVQYSAGKYQQAASLGE 118
           +++            KA + F++      +   +R  +        Y  G+Y +A S   
Sbjct: 431 LFQLGTQAFTNMELDKAVDLFSRAISLGAYNLESRNDAYFWRGESYYRQGEYNKAISDYR 490

Query: 119 EYITQYPESKNVD-YVY--YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SP 173
            Y+      +N D Y    Y +G SY ++        +     L    + V   +N  +P
Sbjct: 491 TYLN-NTRQRNTDMYALAHYNLGYSYFKL--------KEYGEALNRFRQYVNLESNQQTP 541

Query: 174 YVKGARFYVTVG-------------RNQLAAKEVEIGRY--YLK------RGEYVAAIPR 212
               A   +                  + A  +   G Y  Y K      + +Y   I  
Sbjct: 542 AYADAYNRIGDCLFHNRQFAMAEENYTRAAQLQPSAGDYSVYQKGFLLGLQKDYKGKISV 601

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
              ++  + ++++ ++A+     +YV L     A      +   +PQ   AR  
Sbjct: 602 MDRLIREFPESQYVDDALFEKGRSYVLLDNNQAAAASFEQLMRDFPQSSLARKA 655



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 49/167 (29%), Gaps = 32/167 (19%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S TD   + ++Y   V +  + N+S A     +  R+     +++ + L           
Sbjct: 272 SSTDSPLRGDLYILGVCYYNKGNYSSAVNALGRTVREN--DALSQNAYLYLGQSYLKLKD 329

Query: 110 YQQAASLGE-----EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
              A    E      +     + K      Y    +YA +I +  +        +     
Sbjct: 330 KNNARMAFEAAATSSFDK---QVKEA--AMY----NYALLIHETAF--TGFGESVTIFED 378

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
            +  + NS Y      Y+                 YL    Y AA+ 
Sbjct: 379 FLNDFPNSKYADKVNDYLVEV--------------YLTTKNYQAALN 411


>gi|284052491|ref|ZP_06382701.1| TPR repeat-containing serine/threonin protein kinase [Arthrospira
           platensis str. Paraca]
          Length = 755

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 69/206 (33%), Gaps = 32/206 (15%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L     IA   LVG          L+    V+ +  + ++ V  L+  +   A + FN+ 
Sbjct: 334 LWTVVGIAATGLVGLMVIFGLFQVLNRPDPVKSEAAL-KRGVERLESGDPEAAIKAFNRS 392

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
            + FP    A +     A   Y   KY+QA +   + I   P + ++   Y+   ++Y Q
Sbjct: 393 IQLFPDNSEAFR---KRANAYYDLQKYEQAIADYTQAIKLDPTNPDI---YFNRSLAYHQ 446

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
           M              +  +++++                   +  LA            +
Sbjct: 447 M--------GDFGNAINDLNQVIRLNPEDTDA--------FYQRGLAHY---------TQ 481

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEA 229
             Y AAI  +  V+    D   A  A
Sbjct: 482 ENYEAAILDYTEVIRRQPDHSEAYRA 507



 Score = 45.5 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 58/181 (32%), Gaps = 33/181 (18%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y++ +    ++N+  A   + +  R  P    A ++          AG  Q   +   E 
Sbjct: 472 YQRGLAHYTQENYEAAILDYTEVIRRQPDHSEAYRAR---GSAHVKAGNLQAGMADYTEA 528

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           I   P+S      YY  G +   +           +  L   ++++    ++     A  
Sbjct: 529 IRLNPQSAA---AYYNRGRARFHL--------GDYQGALADYNQVISWEPDN-----AEA 572

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA-EHAEEAMARL-VEAYV 238
           Y                  Y+  G Y AAI      +     A ++    +A L V+ Y 
Sbjct: 573 YGNRCST------------YINLGNYEAAIESCSRSIQLNPTAMDYNNRCIAYLNVQNYD 620

Query: 239 A 239
           A
Sbjct: 621 A 621



 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 24/87 (27%), Gaps = 19/87 (21%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ------Y- 105
           + +     Y +        ++  A   +NQ     P           +A         Y 
Sbjct: 532 NPQSAAAYYNRGRARFHLGDYQGALADYNQVISWEP----------DNAEAYGNRCSTYI 581

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDY 132
           + G Y+ A       I   P    +DY
Sbjct: 582 NLGNYEAAIESCSRSIQLNPT--AMDY 606


>gi|22126929|ref|NP_670352.1| tol-pal system protein YbgF [Yersinia pestis KIM 10]
 gi|45440864|ref|NP_992403.1| tol-pal system protein YbgF [Yersinia pestis biovar Microtus str.
           91001]
 gi|51595505|ref|YP_069696.1| tol-pal system protein YbgF [Yersinia pseudotuberculosis IP 32953]
 gi|108806601|ref|YP_650517.1| tol-pal system protein YbgF [Yersinia pestis Antiqua]
 gi|108813032|ref|YP_648799.1| tol-pal system protein YbgF [Yersinia pestis Nepal516]
 gi|145599835|ref|YP_001163911.1| tol-pal system protein YbgF [Yersinia pestis Pestoides F]
 gi|153950529|ref|YP_001401829.1| tol-pal system protein YbgF [Yersinia pseudotuberculosis IP 31758]
 gi|162419419|ref|YP_001605924.1| tol-pal system protein YbgF [Yersinia pestis Angola]
 gi|166211659|ref|ZP_02237694.1| tol-pal system protein YbgF [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167399977|ref|ZP_02305495.1| tol-pal system protein YbgF [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167424105|ref|ZP_02315858.1| tol-pal system protein YbgF [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|170025176|ref|YP_001721681.1| tol-pal system protein YbgF [Yersinia pseudotuberculosis YPIII]
 gi|186894558|ref|YP_001871670.1| tol-pal system protein YbgF [Yersinia pseudotuberculosis PB1/+]
 gi|229894004|ref|ZP_04509190.1| SecB-dependent secretory protein [Yersinia pestis Pestoides A]
 gi|229903472|ref|ZP_04518585.1| SecB-dependent secretory protein [Yersinia pestis Nepal516]
 gi|270487252|ref|ZP_06204326.1| tol-pal system protein YbgF [Yersinia pestis KIM D27]
 gi|21959968|gb|AAM86603.1|AE013906_7 hypothetical protein y3053 [Yersinia pestis KIM 10]
 gi|45435722|gb|AAS61280.1| conserved hypothetical protein [Yersinia pestis biovar Microtus
           str. 91001]
 gi|51588787|emb|CAH20401.1| conserved putative exported protein [Yersinia pseudotuberculosis IP
           32953]
 gi|108776680|gb|ABG19199.1| hypothetical protein YPN_2872 [Yersinia pestis Nepal516]
 gi|108778514|gb|ABG12572.1| hypothetical protein YPA_0604 [Yersinia pestis Antiqua]
 gi|145211531|gb|ABP40938.1| hypothetical protein YPDSF_2570 [Yersinia pestis Pestoides F]
 gi|152962024|gb|ABS49485.1| tol-pal system protein YbgF [Yersinia pseudotuberculosis IP 31758]
 gi|162352234|gb|ABX86182.1| tol-pal system protein YbgF [Yersinia pestis Angola]
 gi|166207430|gb|EDR51910.1| tol-pal system protein YbgF [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167050685|gb|EDR62093.1| tol-pal system protein YbgF [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167056954|gb|EDR66717.1| tol-pal system protein YbgF [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|169751710|gb|ACA69228.1| tol-pal system protein YbgF [Yersinia pseudotuberculosis YPIII]
 gi|186697584|gb|ACC88213.1| tol-pal system protein YbgF [Yersinia pseudotuberculosis PB1/+]
 gi|229679242|gb|EEO75345.1| SecB-dependent secretory protein [Yersinia pestis Nepal516]
 gi|229703889|gb|EEO90902.1| SecB-dependent secretory protein [Yersinia pestis Pestoides A]
 gi|270335756|gb|EFA46533.1| tol-pal system protein YbgF [Yersinia pestis KIM D27]
 gi|320014266|gb|ADV97837.1| SecB-dependent secretory protein [Yersinia pestis biovar Medievalis
           str. Harbin 35]
          Length = 269

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 52/156 (33%), Gaps = 9/156 (5%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVL-FLKEQNFSKAYEYFNQCSRDFPF 89
                 G     +             +   Y  AV   L+++ + +A   F    + +P 
Sbjct: 122 TAAGSSGNADAGAAASTAAPAASTGDENSDYNVAVSLALEKKQYDQAITAFQSFVKQYPK 181

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +     +      + Y+ GK   AA      +  YP+S       + VG+        + 
Sbjct: 182 STYQPNANYWLGQLYYNKGKKDDAAYYYAVVVKNYPKSPKSSEAMFKVGV--------IM 233

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            D+  +        +++++Y N+   K A+  ++  
Sbjct: 234 QDKGQSDKAKAVYQQVIKQYPNTDAAKQAQKRLSAL 269



 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 50/129 (38%), Gaps = 14/129 (10%)

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           S   +   +  +++     +      V++Y  S Y   A +++              G+ 
Sbjct: 150 SDYNVAVSLALEKKQYDQAITAFQSFVKQYPKSTYQPNANYWL--------------GQL 195

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           Y  +G+   A   + +V+ NY  +  + EAM ++          D+A+ V   + ++YP 
Sbjct: 196 YYNKGKKDDAAYYYAVVVKNYPKSPKSSEAMFKVGVIMQDKGQSDKAKAVYQQVIKQYPN 255

Query: 260 GYWARYVET 268
              A+  + 
Sbjct: 256 TDAAKQAQK 264


>gi|224369817|ref|YP_002603981.1| TPR domain family protein [Desulfobacterium autotrophicum HRM2]
 gi|223692534|gb|ACN15817.1| TPR domain family protein [Desulfobacterium autotrophicum HRM2]
          Length = 231

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 48/125 (38%), Gaps = 8/125 (6%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y  A   + E+NF +A   F +    +P + +A  +L       YS G +Q+A +  ++
Sbjct: 113 LYNSARSLVLEENFHEAARLFREFLTRYPNSELADNALYWLGECHYSLGNFQEAINTFKD 172

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +T YP+   V         +Y  +                Y+  +V  Y  +P  + A 
Sbjct: 173 VVTLYPKGGKVPDALLKTAYAYLSLDD--------ADRAHHYLKLVVRGYPFTPAGEKAE 224

Query: 180 FYVTV 184
             +  
Sbjct: 225 QKLKA 229



 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 36/106 (33%), Gaps = 14/106 (13%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
                  +     + RY NS     A +++      L              G +  AI  
Sbjct: 124 ENFHEAARLFREFLTRYPNSELADNALYWLGECHYSL--------------GNFQEAINT 169

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           F+ V+  Y       +A+ +   AY++L   D A   + L+   YP
Sbjct: 170 FKDVVTLYPKGGKVPDALLKTAYAYLSLDDADRAHHYLKLVVRGYP 215



 Score = 53.2 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 46/147 (31%), Gaps = 23/147 (15%)

Query: 84  SRDFPFAGVARKSLL-MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
            ++ P        LL  SA        + +AA L  E++T+YP S+  D   Y +G  + 
Sbjct: 99  QKNNPHPVYGEPILLYNSARSLVLEENFHEAARLFREFLTRYPNSELADNALYWLGECHY 158

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
            +           +  +     +V  Y     V  A                     YL 
Sbjct: 159 SL--------GNFQEAINTFKDVVTLYPKGGKVPDALLKTAYA--------------YLS 196

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEA 229
             +   A    +LV+  Y      E+A
Sbjct: 197 LDDADRAHHYLKLVVRGYPFTPAGEKA 223



 Score = 42.0 bits (98), Expect = 0.086,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 23/75 (30%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                    +Y          NF +A   F      +P  G    +LL +A+   S    
Sbjct: 141 PNSELADNALYWLGECHYSLGNFQEAINTFKDVVTLYPKGGKVPDALLKTAYAYLSLDDA 200

Query: 111 QQAASLGEEYITQYP 125
            +A    +  +  YP
Sbjct: 201 DRAHHYLKLVVRGYP 215



 Score = 40.5 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
             +  A   F+  L  Y ++E A+ A+  L E + +L    EA      +   YP+G   
Sbjct: 124 ENFHEAARLFREFLTRYPNSELADNALYWLGECHYSLGNFQEAINTFKDVVTLYPKGG-- 181

Query: 264 RYVETLVK 271
           +  + L+K
Sbjct: 182 KVPDALLK 189


>gi|82703825|ref|YP_413391.1| hypothetical protein Nmul_A2712 [Nitrosospira multiformis ATCC
           25196]
 gi|82411890|gb|ABB75999.1| conserved hypothetical protein [Nitrosospira multiformis ATCC
           25196]
          Length = 304

 Score = 67.1 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 44/126 (34%), Gaps = 8/126 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YE      K   + +A   FN   R +P +  A  +        Y+  +++ A +  E  
Sbjct: 187 YENGYDLFKTGKYKEAISSFNSFLRSYPESSFAASAHYWIGNSFYALREFKNAVAAQETL 246

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           I  YP+S  V      +  S  ++ +               +  ++ +Y  S     A+ 
Sbjct: 247 IKIYPDSPKVPDAMLNIASSQLELNKK--------DAARTILESVIVKYPGSDAADKAKR 298

Query: 181 YVTVGR 186
            +T  +
Sbjct: 299 RLTSIK 304



 Score = 55.5 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 41/113 (36%), Gaps = 14/113 (12%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           K  +   +  +  Y  S +   A +++                +Y  R  +  A+   + 
Sbjct: 200 KEAISSFNSFLRSYPESSFAASAHYWIGN-------------SFYALRE-FKNAVAAQET 245

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           ++  Y D+    +AM  +  + + L   D AR ++  +  +YP    A   + 
Sbjct: 246 LIKIYPDSPKVPDAMLNIASSQLELNKKDAARTILESVIVKYPGSDAADKAKR 298



 Score = 40.5 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 24/61 (39%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            K G+Y  AI  F   L +Y ++  A  A   +  ++ AL     A      + + YP  
Sbjct: 194 FKTGKYKEAISSFNSFLRSYPESSFAASAHYWIGNSFYALREFKNAVAAQETLIKIYPDS 253

Query: 261 Y 261
            
Sbjct: 254 P 254


>gi|148262284|ref|YP_001228990.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4]
 gi|146395784|gb|ABQ24417.1| Tetratricopeptide TPR_2 repeat protein [Geobacter uraniireducens
           Rf4]
          Length = 275

 Score = 67.1 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 47/133 (35%), Gaps = 8/133 (6%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
            +    +Y++ +  LK  +  KA EYF +    FP   +   +        Y   KY QA
Sbjct: 151 EQAPDALYQRGLDTLKGGDPQKAREYFTKFIELFPKHELTANARYWLGETYYHEKKYDQA 210

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
               +E I  YP  + V        M++ ++           K       +++E    + 
Sbjct: 211 ILEFQEVIKNYPGKEKVPAAMLKQAMAFKEL--------GDAKSARYVYKKLIEDSPYTD 262

Query: 174 YVKGARFYVTVGR 186
             + A+  +   +
Sbjct: 263 EARIAKEKLKELK 275



 Score = 64.4 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 48/144 (33%), Gaps = 22/144 (15%)

Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           +      Y  G+   +            +   +Y ++ +E +        AR+++     
Sbjct: 151 EQAPDALYQRGLDTLKG--------GDPQKAREYFTKFIELFPKHELTANARYWL----- 197

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
                    G  Y    +Y  AI  FQ V+ NY   E    AM +   A+  L     AR
Sbjct: 198 ---------GETYYHEKKYDQAILEFQEVIKNYPGKEKVPAAMLKQAMAFKELGDAKSAR 248

Query: 248 EVVSLIQERYPQGYWARYVETLVK 271
            V   + E  P    AR  +  +K
Sbjct: 249 YVYKKLIEDSPYTDEARIAKEKLK 272



 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 27/83 (32%), Gaps = 3/83 (3%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                     Y     +  E+ + +A   F +  +++P       ++L  A      G  
Sbjct: 185 PKHELTANARYWLGETYYHEKKYDQAILEFQEVIKNYPGKEKVPAAMLKQAMAFKELGDA 244

Query: 111 QQAASLGEEYITQYPESKNVDYV 133
           + A  + ++ I    +S   D  
Sbjct: 245 KSARYVYKKLIE---DSPYTDEA 264


>gi|46580339|ref|YP_011147.1| TPR domain-containing protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120602284|ref|YP_966684.1| TPR repeat-containing protein [Desulfovibrio vulgaris DP4]
 gi|46449756|gb|AAS96406.1| TPR domain protein [Desulfovibrio vulgaris str. Hildenborough]
 gi|120562513|gb|ABM28257.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio vulgaris DP4]
 gi|311233682|gb|ADP86536.1| tol-pal system protein YbgF [Desulfovibrio vulgaris RCH1]
          Length = 312

 Score = 67.1 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 50/124 (40%), Gaps = 8/124 (6%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y+  +     +N+  A + F   +  FP   +   +        +    +  AA   E+
Sbjct: 194 LYDTGISSFNSRNYKDALKSFKDFTDTFPNHKLTSNAWFWQGETNFQMNNFPAAALAYEQ 253

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            I+++P+S  +       G+ + +  +    D    +     +  +++++ +SP  K A+
Sbjct: 254 VISKFPKSSKLPSALLKQGICFYKTGK---KDAGKIR-----LEELIKKHPDSPEAKRAQ 305

Query: 180 FYVT 183
            Y+ 
Sbjct: 306 QYIK 309



 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/138 (13%), Positives = 43/138 (31%), Gaps = 22/138 (15%)

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
            Y  G+S            R  K  L+      + + N      A F+            
Sbjct: 194 LYDTGISSFNS--------RNYKDALKSFKDFTDTFPNHKLTSNAWFWQ----------- 234

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
              G    +   + AA   ++ V++ +  +     A+ +    +      D  +  +  +
Sbjct: 235 ---GETNFQMNNFPAAALAYEQVISKFPKSSKLPSALLKQGICFYKTGKKDAGKIRLEEL 291

Query: 254 QERYPQGYWARYVETLVK 271
            +++P    A+  +  +K
Sbjct: 292 IKKHPDSPEAKRAQQYIK 309


>gi|206585491|gb|ACI15551.1| serine/threonine protein kinase [Arthrospira platensis S6]
          Length = 732

 Score = 67.1 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 69/206 (33%), Gaps = 32/206 (15%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L     IA   LVG          L+    V+ +  + ++ V  L+  +   A + FN+ 
Sbjct: 311 LWTVVGIAATGLVGLMVIFGLFQVLNRPDPVKSEAAL-KRGVERLESGDPEAAIKAFNRS 369

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
            + FP    A +     A   Y   KY+QA +   + I   P + ++   Y+   ++Y Q
Sbjct: 370 IQLFPDNSEAFR---KRANAYYDLQKYEQAIADYTQAIKLDPTNPDI---YFNRSLAYHQ 423

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
           M              +  +++++                   +  LA            +
Sbjct: 424 M--------GDFGNAINDLNQVIRLNPEDTDA--------FYQRGLAHY---------TQ 458

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEA 229
             Y AAI  +  V+    D   A  A
Sbjct: 459 ENYEAAILDYTEVIRRQPDHSEAYRA 484



 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 58/181 (32%), Gaps = 33/181 (18%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y++ +    ++N+  A   + +  R  P    A ++          AG  Q   +   E 
Sbjct: 449 YQRGLAHYTQENYEAAILDYTEVIRRQPDHSEAYRAR---GSAHVKAGNLQAGMADYTEA 505

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           I   P+S      YY  G +   +           +  L   ++++    ++     A  
Sbjct: 506 IRLNPQSAA---AYYNRGRARFHL--------GDYQGALADYNQVISWEPDN-----AEA 549

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA-EHAEEAMARL-VEAYV 238
           Y                  Y+  G Y AAI      +     A ++    +A L V+ Y 
Sbjct: 550 YGNRCST------------YINLGNYEAAIESCSRSIQLNPTAMDYNNRCIAYLNVQNYD 597

Query: 239 A 239
           A
Sbjct: 598 A 598



 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 24/87 (27%), Gaps = 19/87 (21%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ------Y- 105
           + +     Y +        ++  A   +NQ     P           +A         Y 
Sbjct: 509 NPQSAAAYYNRGRARFHLGDYQGALADYNQVISWEP----------DNAEAYGNRCSTYI 558

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDY 132
           + G Y+ A       I   P    +DY
Sbjct: 559 NLGNYEAAIESCSRSIQLNPT--AMDY 583


>gi|253702174|ref|YP_003023363.1| tol-pal system protein YbgF [Geobacter sp. M21]
 gi|251777024|gb|ACT19605.1| tol-pal system protein YbgF [Geobacter sp. M21]
          Length = 283

 Score = 67.1 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 50/146 (34%), Gaps = 8/146 (5%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
           +    +   +    +    +    +Y+K    +KE N  KA E F+      P   +A  
Sbjct: 142 MAKMEKGVEEQAKKAAQLQQAPDYLYQKGYEAMKEGNLPKARELFSSFLEHHPKHNLAAN 201

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +        YS  K++ A    E  I  YP+           GM++         +   T
Sbjct: 202 AQYWIGESYYSEKKFEDAVLEFENVIKNYPDKDKAPAAMLKQGMAF--------RELGDT 253

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFY 181
           K     + R+VE +  S   K AR  
Sbjct: 254 KSANYILKRLVEEHPKSEEAKIAREK 279



 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 49/136 (36%), Gaps = 23/136 (16%)

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
           DY  Y  G    + +++            +  S  +E +        A+++         
Sbjct: 164 DY-LYQKG---YEAMKEGNLP-----KARELFSSFLEHHPKHNLAANAQYW--------- 205

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
                IG  Y    ++  A+  F+ V+ NY D + A  AM +   A+  L     A  ++
Sbjct: 206 -----IGESYYSEKKFEDAVLEFENVIKNYPDKDKAPAAMLKQGMAFRELGDTKSANYIL 260

Query: 251 SLIQERYPQGYWARYV 266
             + E +P+   A+  
Sbjct: 261 KRLVEEHPKSEEAKIA 276


>gi|237751395|ref|ZP_04581875.1| competence lipoprotein [Helicobacter bilis ATCC 43879]
 gi|229372761|gb|EEO23152.1| competence lipoprotein [Helicobacter bilis ATCC 43879]
          Length = 210

 Score = 67.1 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 63/169 (37%), Gaps = 9/169 (5%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
                ++V  +           YE     ++  N   A  +F+    +   + +  +++L
Sbjct: 14  CSNKDKEVVYNQPASFW-----YEGIFKNIRLGNLETADSHFSSLQSEHLNSPLIPEAML 68

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
                  S  +Y  +    +EY+ +Y  + N DY+ +L   S+    ++   DQ+     
Sbjct: 69  ALGQAHLSNEEYILSDFYFKEYLKRYGNANNADYISFLRLKSHLYAFKNASKDQQFMTDS 128

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE--IGRYYLKRGE 205
           +  +   +E+Y NS Y+          +  L   E+   I R Y K  +
Sbjct: 129 IILIQEFMEKYPNSRYMPFVHEM--EVKFVLGQNELNKAIARVYEKNDQ 175


>gi|149366874|ref|ZP_01888908.1| putative exported protein [Yersinia pestis CA88-4125]
 gi|165924608|ref|ZP_02220440.1| tol-pal system protein YbgF [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165938319|ref|ZP_02226877.1| tol-pal system protein YbgF [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166011572|ref|ZP_02232470.1| tol-pal system protein YbgF [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|167419821|ref|ZP_02311574.1| tol-pal system protein YbgF [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|218928294|ref|YP_002346169.1| tol-pal system protein YbgF [Yersinia pestis CO92]
 gi|229841063|ref|ZP_04461222.1| SecB-dependent secretory protein [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229843167|ref|ZP_04463313.1| SecB-dependent secretory protein [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|294503131|ref|YP_003567193.1| hypothetical protein YPZ3_1021 [Yersinia pestis Z176003]
 gi|115346905|emb|CAL19792.1| putative exported protein [Yersinia pestis CO92]
 gi|149291248|gb|EDM41323.1| putative exported protein [Yersinia pestis CA88-4125]
 gi|165913697|gb|EDR32316.1| tol-pal system protein YbgF [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165923668|gb|EDR40800.1| tol-pal system protein YbgF [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165989520|gb|EDR41821.1| tol-pal system protein YbgF [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166962562|gb|EDR58583.1| tol-pal system protein YbgF [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|229689514|gb|EEO81575.1| SecB-dependent secretory protein [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229697429|gb|EEO87476.1| SecB-dependent secretory protein [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|262361167|gb|ACY57888.1| hypothetical protein YPD4_0979 [Yersinia pestis D106004]
 gi|262365276|gb|ACY61833.1| hypothetical protein YPD8_1148 [Yersinia pestis D182038]
 gi|294353590|gb|ADE63931.1| hypothetical protein YPZ3_1021 [Yersinia pestis Z176003]
          Length = 269

 Score = 67.1 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 52/156 (33%), Gaps = 9/156 (5%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVL-FLKEQNFSKAYEYFNQCSRDFPF 89
                 G     +             +   Y  AV   L+++ + +A   F    + +P 
Sbjct: 122 TAAGSSGNADAGAAASTAAPAASTGDENSDYNVAVSLALEKKQYDQAITVFQSFVKQYPK 181

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +     +      + Y+ GK   AA      +  YP+S       + VG+        + 
Sbjct: 182 STYQPNANYWLGQLYYNKGKKDDAAYYYAVVVKNYPKSPKSSEAMFKVGV--------IM 233

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            D+  +        +++++Y N+   K A+  ++  
Sbjct: 234 QDKGQSDKAKAVYQQVIKQYPNTDAAKQAQKRLSAL 269



 Score = 54.4 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 50/129 (38%), Gaps = 14/129 (10%)

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           S   +   +  +++     +      V++Y  S Y   A +++              G+ 
Sbjct: 150 SDYNVAVSLALEKKQYDQAITVFQSFVKQYPKSTYQPNANYWL--------------GQL 195

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           Y  +G+   A   + +V+ NY  +  + EAM ++          D+A+ V   + ++YP 
Sbjct: 196 YYNKGKKDDAAYYYAVVVKNYPKSPKSSEAMFKVGVIMQDKGQSDKAKAVYQQVIKQYPN 255

Query: 260 GYWARYVET 268
              A+  + 
Sbjct: 256 TDAAKQAQK 264



 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 45/126 (35%), Gaps = 22/126 (17%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +Y QA ++ + ++ QYP+S       Y +G  Y    +              Y + +V+
Sbjct: 163 KQYDQAITVFQSFVKQYPKSTYQPNANYWLGQLYYNKGKKDD--------AAYYYAVVVK 214

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y  SP    A F V V        +     Y              Q V+  Y + + A+
Sbjct: 215 NYPKSPKSSEAMFKVGVIMQDKGQSDKAKAVY--------------QQVIKQYPNTDAAK 260

Query: 228 EAMARL 233
           +A  RL
Sbjct: 261 QAQKRL 266


>gi|308271858|emb|CBX28466.1| hypothetical protein N47_G37900 [uncultured Desulfobacterium sp.]
          Length = 281

 Score = 67.1 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 52/128 (40%), Gaps = 8/128 (6%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
            + E+Y  A+     + ++ A +   +    +P +  A           Y    Y++A  
Sbjct: 160 SEDEIYASALKLYDGEKYAAARQKLQEILSKYPNSDKADNCQFWIGESYYQEKWYEKAIV 219

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
             ++ I +YP+   +       G+S+  +      D++ +KL    ++ +++++ NS   
Sbjct: 220 EYQKVIEKYPKGNKMKASLLKQGLSFYNLG-----DKKNSKL---VLNELIQKFPNSNEA 271

Query: 176 KGARFYVT 183
           K A   + 
Sbjct: 272 KIAESKLK 279



 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 46/122 (37%), Gaps = 14/122 (11%)

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
           YD        Q +  I+ +Y NS      +                IG  Y +   Y  A
Sbjct: 172 YDGEKYAAARQKLQEILSKYPNSDKADNCQ--------------FWIGESYYQEKWYEKA 217

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
           I  +Q V+  Y      + ++ +   ++  L     ++ V++ + +++P    A+  E+ 
Sbjct: 218 IVEYQKVIEKYPKGNKMKASLLKQGLSFYNLGDKKNSKLVLNELIQKFPNSNEAKIAESK 277

Query: 270 VK 271
           +K
Sbjct: 278 LK 279


>gi|196228082|ref|ZP_03126949.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
 gi|196227485|gb|EDY21988.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
          Length = 1038

 Score = 67.1 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 65/185 (35%), Gaps = 13/185 (7%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
            +FA T    +A   L      +   +           +++  +A     +  ++ A   
Sbjct: 5   RRFAPTAIVCLASSILG-----TGPAMAQAPAAPQTLDQQMMAEAQQLFDQGKYADAAAK 59

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI--TQYPE--SKNVDYVYY 135
           F +  + FP      ++   + +  Y AG+Y QA +  ++ +     P   +   +    
Sbjct: 60  FEELVKKFPQVPTVPQANFSAGYSFYLAGEYDQAIADFKKVLDAKNLPAEYAPTAELALS 119

Query: 136 LVGMSY----AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
           +   +     A+M  +    +      ++     + +Y NS   + A +  ++   QL+ 
Sbjct: 120 MTAQALSAKAAKMAPEDQRRKTTLDDAVKGFDAFLAKYPNSEEAESATYGKSLALFQLSR 179

Query: 192 KEVEI 196
            +  I
Sbjct: 180 YDEAI 184



 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 58/192 (30%), Gaps = 26/192 (13%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                    ++            S+A   F + + DFP +  A  S    A +     KY
Sbjct: 571 PKSQYTPAALFALGKAQAGTNQASEALNTFKKVATDFPKSDPAPFSYFERASILQKEQKY 630

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
               +  +E+I  YP S  +   Y      +   I+ +  D       +      V +  
Sbjct: 631 DDCVTTMKEFIKNYPNSPALFQAY-----DFIAQIQTMKKDGGM--DAVATYEEFVAKKP 683

Query: 171 NSPYVKGARFYVTVGRN--------QLAAKEVEIGRYYLKRGEYVAAIPR----FQLVLA 218
             P    A   +              LA +E        KR E+   I +     + +L 
Sbjct: 684 KDPSTPDALLKLAALWKGYTDSQGTYLAIEE-------AKRTEWKKGIEKSLQAAEKLLT 736

Query: 219 NYSDAEHAEEAM 230
            + D+    +A+
Sbjct: 737 EFPDSPQVAKAL 748



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/200 (12%), Positives = 55/200 (27%), Gaps = 23/200 (11%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            +A   ++   F  A           P   +A  +      +    GK  +A    +E  
Sbjct: 472 ARAGAQIELGQFDPAIAALKDTLSKNPPKDLAVDANFYLGTIYAKTGKVAEAIKQFKEVR 531

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
            ++  +   +  +Y VG             +   K  +  +    ++Y  S Y   A   
Sbjct: 532 DKFSGTPQAEQAHYQVG---------QMLSETDAKGAIPELESFFKKYPKSQYTPAA--- 579

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
           +       A              +   A+  F+ V  ++  ++ A  +            
Sbjct: 580 LFALGKAQAG-----------TNQASEALNTFKKVATDFPKSDPAPFSYFERASILQKEQ 628

Query: 242 LMDEAREVVSLIQERYPQGY 261
             D+    +    + YP   
Sbjct: 629 KYDDCVTTMKEFIKNYPNSP 648



 Score = 46.3 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 62/211 (29%), Gaps = 42/211 (19%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           +D    +          +    ++ K    ++A + F +    F     A +        
Sbjct: 491 KDTLSKNPPKDLAVDANFYLGTIYAKTGKVAEAIKQFKEVRDKFSGTPQAEQ-------A 543

Query: 104 QYSAG------KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
            Y  G        + A    E +  +YP+S+      + +G + A   +           
Sbjct: 544 HYQVGQMLSETDAKGAIPELESFFKKYPKSQYTPAALFALGKAQAGTNQ--------ASE 595

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
            L    ++   +  S     +       R  +  KE           +Y   +   +  +
Sbjct: 596 ALNTFKKVATDFPKSDPAPFSY----FERASILQKE----------QKYDDCVTTMKEFI 641

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEARE 248
            NY ++         L +AY  +A +   ++
Sbjct: 642 KNYPNSPA-------LFQAYDFIAQIQTMKK 665



 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 72/199 (36%), Gaps = 23/199 (11%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           K ++  KA  YF++  + +P + +    +L  A  Q   G++  A +  ++ +++ P   
Sbjct: 442 KHKDAPKAIHYFDEGIKMYPKSKLLGSMVLARAGAQIELGQFDPAIAALKDTLSKNPPKD 501

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
                 + +G  YA+               ++    + ++++ +P  + A          
Sbjct: 502 LAVDANFYLGTIYAKT--------GKVAEAIKQFKEVRDKFSGTPQAEQA---------- 543

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
                 ++G+   +      AIP  +     Y  +++   A+  L +A        EA  
Sbjct: 544 ----HYQVGQMLSETDA-KGAIPELESFFKKYPKSQYTPAALFALGKAQAGTNQASEALN 598

Query: 249 VVSLIQERYPQGYWARYVE 267
               +   +P+   A +  
Sbjct: 599 TFKKVATDFPKSDPAPFSY 617



 Score = 44.3 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 40/179 (22%), Positives = 71/179 (39%), Gaps = 14/179 (7%)

Query: 97  LLMSAFVQ--YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
             M A  Q  +  GKY  AA+  EE + ++P+   V    +  G S+        YDQ  
Sbjct: 38  QQMMAEAQQLFDQGKYADAAAKFEELVKKFPQVPTVPQANFSAGYSFYLAG---EYDQ-- 92

Query: 155 TKLMLQYMSRIV--ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA-AIP 211
               +    +++  +    + Y   A   +++    L+AK  ++     +R   +  A+ 
Sbjct: 93  ---AIADFKKVLDAKNLP-AEYAPTAELALSMTAQALSAKAAKMAPEDQRRKTTLDDAVK 148

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
            F   LA Y ++E AE A      A   L+  DEA   +     ++ Q    +  E L+
Sbjct: 149 GFDAFLAKYPNSEEAESATYGKSLALFQLSRYDEAITALKANLAKFIQSPTVQDSEYLL 207



 Score = 39.3 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 13/103 (12%), Positives = 32/103 (31%), Gaps = 9/103 (8%)

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE----EYITQYPESKN 129
             A + F+     +P +  A  +    +   +   +Y +A +  +    ++I     S  
Sbjct: 144 DDAVKGFDAFLAKYPNSEEAESATYGKSLALFQLSRYDEAITALKANLAKFIQ----SPT 199

Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRA-TKLMLQYMSRIVERYTN 171
           V    YL+G++ A                         + + +
Sbjct: 200 VQDSEYLLGLTMAAKATSEKQKPGPEAAKADAEFDEAEKLFRD 242


>gi|123443144|ref|YP_001007118.1| tol-pal system protein YbgF [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|332160931|ref|YP_004297508.1| tol-pal system protein YbgF [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|122090105|emb|CAL12968.1| putative exported protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|318604838|emb|CBY26336.1| TPR repeat containing exported protein; Putative periplasmic
           protein contains a protein prenylyltransferase domain
           [Yersinia enterocolitica subsp. palearctica Y11]
 gi|325665161|gb|ADZ41805.1| tol-pal system protein YbgF [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330864067|emb|CBX74144.1| uncharacterized protein ybgF [Yersinia enterocolitica W22703]
          Length = 269

 Score = 67.1 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 49/126 (38%), Gaps = 9/126 (7%)

Query: 61  YEKAVL-FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  AV   L+++ + +A   F    + +P +     +      + Y+ GK   AA     
Sbjct: 152 YNAAVSLALEKKQYDQAITAFQGFVKQYPKSTYQPNANYWLGQLYYNKGKKDDAAYYYAV 211

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       + VG+        +  D+  +        +++++Y N+   K A+
Sbjct: 212 VVKNYPKSPKSSEAMFKVGV--------IMQDKGQSDKAKAVYQQVIKQYPNTDAAKQAQ 263

Query: 180 FYVTVG 185
             ++  
Sbjct: 264 KRLSAL 269



 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 14/129 (10%)

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           S       +  +++     +      V++Y  S Y   A +++              G+ 
Sbjct: 150 SDYNAAVSLALEKKQYDQAITAFQGFVKQYPKSTYQPNANYWL--------------GQL 195

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           Y  +G+   A   + +V+ NY  +  + EAM ++          D+A+ V   + ++YP 
Sbjct: 196 YYNKGKKDDAAYYYAVVVKNYPKSPKSSEAMFKVGVIMQDKGQSDKAKAVYQQVIKQYPN 255

Query: 260 GYWARYVET 268
              A+  + 
Sbjct: 256 TDAAKQAQK 264


>gi|298292992|ref|YP_003694931.1| tol-pal system protein YbgF [Starkeya novella DSM 506]
 gi|296929503|gb|ADH90312.1| tol-pal system protein YbgF [Starkeya novella DSM 506]
          Length = 321

 Score = 67.1 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 41/134 (30%), Gaps = 22/134 (16%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           + K L   A+       Y Q+A+  E++I  YP  +     YY +G +  Q         
Sbjct: 196 SPKDLYDLAYGYMLRQDYAQSATSFEQFIKLYPNDRAAPDAYYWLGETQFQR-------- 247

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           +  K   Q   ++   Y N+     A   +      +  K+              AA   
Sbjct: 248 KTYKEAAQNFLKVSTDYPNAVKAPDALLRLGQSLAAIGEKD--------------AACAT 293

Query: 213 FQLVLANYSDAEHA 226
              V   Y  A   
Sbjct: 294 LNAVNNKYPRASAT 307



 Score = 51.3 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 20/123 (16%)

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           ++Y  M+R   Y Q AT        + ++ Y N      A +++   +            
Sbjct: 203 LAYGYMLRQ-DYAQSAT-----SFEQFIKLYPNDRAAPDAYYWLGETQ------------ 244

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
              +R  Y  A   F  V  +Y +A  A +A+ RL ++  A+   D A   ++ +  +YP
Sbjct: 245 --FQRKTYKEAAQNFLKVSTDYPNAVKAPDALLRLGQSLAAIGEKDAACATLNAVNNKYP 302

Query: 259 QGY 261
           +  
Sbjct: 303 RAS 305



 Score = 43.6 bits (102), Expect = 0.034,   Method: Composition-based stats.
 Identities = 14/95 (14%), Positives = 38/95 (40%), Gaps = 6/95 (6%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           + +      +++Y+ A  ++  Q+++++   F Q  + +P    A  +       Q+   
Sbjct: 189 NPMPPSNSPKDLYDLAYGYMLRQDYAQSATSFEQFIKLYPNDRAAPDAYYWLGETQFQRK 248

Query: 109 KYQQAASLGEEYITQ---YPESKNVDYVYYLVGMS 140
            Y++A    + ++     YP +         +G S
Sbjct: 249 TYKEA---AQNFLKVSTDYPNAVKAPDALLRLGQS 280



 Score = 38.6 bits (89), Expect = 0.91,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 27/76 (35%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
             D       Y       + + + +A + F + S D+P A  A  +LL       + G+ 
Sbjct: 228 PNDRAAPDAYYWLGETQFQRKTYKEAAQNFLKVSTDYPNAVKAPDALLRLGQSLAAIGEK 287

Query: 111 QQAASLGEEYITQYPE 126
             A +       +YP 
Sbjct: 288 DAACATLNAVNNKYPR 303


>gi|297539674|ref|YP_003675443.1| tol-pal system protein YbgF [Methylotenera sp. 301]
 gi|297259021|gb|ADI30866.1| tol-pal system protein YbgF [Methylotenera sp. 301]
          Length = 282

 Score = 67.1 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 59/143 (41%), Gaps = 8/143 (5%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
           S  V   +      + ++ E A    KE     A+  +++  +D+P + +A ++     +
Sbjct: 144 STPVVAAAPAKNTQEYQLLELANGLSKESKHKDAFNAYDKFLKDYPNSTLAAEATYGLGY 203

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
            Q++   Y+ A +  ++ I  +PES  V     ++ M+ +Q+   +           + +
Sbjct: 204 SQFALKNYKSAIATQQKVIDLHPESPKVPDA--MLNMANSQI--QLGLVPG----AKKTL 255

Query: 163 SRIVERYTNSPYVKGARFYVTVG 185
             ++ ++ NS     A+  +   
Sbjct: 256 RDLIAQFPNSEVTPTAQKRLKAL 278



 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 39/106 (36%), Gaps = 14/106 (13%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           K       + ++ Y NS     A + +   +  L                Y +AI   Q 
Sbjct: 175 KDAFNAYDKFLKDYPNSTLAAEATYGLGYSQFAL--------------KNYKSAIATQQK 220

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           V+  + ++    +AM  +  + + L L+  A++ +  +  ++P   
Sbjct: 221 VIDLHPESPKVPDAMLNMANSQIQLGLVPGAKKTLRDLIAQFPNSE 266



 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 49/137 (35%), Gaps = 22/137 (16%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
           LL  A       K++ A +  ++++  YP S       Y +G S   +        +  K
Sbjct: 161 LLELANGLSKESKHKDAFNAYDKFLKDYPNSTLAAEATYGLGYSQFAL--------KNYK 212

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             +    ++++ +  SP V  A   +   + QL              G    A    + +
Sbjct: 213 SAIATQQKVIDLHPESPKVPDAMLNMANSQIQL--------------GLVPGAKKTLRDL 258

Query: 217 LANYSDAEHAEEAMARL 233
           +A + ++E    A  RL
Sbjct: 259 IAQFPNSEVTPTAQKRL 275


>gi|186477206|ref|YP_001858676.1| tol-pal system protein YbgF [Burkholderia phymatum STM815]
 gi|184193665|gb|ACC71630.1| tol-pal system protein YbgF [Burkholderia phymatum STM815]
          Length = 249

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 21/137 (15%), Positives = 51/137 (37%), Gaps = 8/137 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
             T    + E +  A    +  +F  A   F      +P +     +        Y+   
Sbjct: 121 EGTVQPGETEAFNAASQQFRSGDFKNAAASFRSFITRYPQSPYQPTAQYWLGNALYALRD 180

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y+ + S+ +  + +YP+         L+ ++  Q+ +     Q+A     + + +IV +Y
Sbjct: 181 YKGSTSVWQGVVQKYPQHPRAPEA--LLAIANNQLEQG----QKAA--AKKTLEQIVAQY 232

Query: 170 TNSPYVKGARFYVTVGR 186
             S   + A+  ++  +
Sbjct: 233 GGSDVAQSAQSKLSQIK 249



 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 35/109 (32%), Gaps = 14/109 (12%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         + RY  SPY   A++++           +   R      +Y  +   
Sbjct: 142 GDFKNAAASFRSFITRYPQSPYQPTAQYWL--------GNALYALR------DYKGSTSV 187

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +Q V+  Y     A EA+  +    +       A++ +  I  +Y    
Sbjct: 188 WQGVVQKYPQHPRAPEALLAIANNQLEQGQKAAAKKTLEQIVAQYGGSD 236



 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 54/132 (40%), Gaps = 22/132 (16%)

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           Q+ +G ++ AA+    +IT+YP+S       Y +G +   +        R  K       
Sbjct: 138 QFRSGDFKNAAASFRSFITRYPQSPYQPTAQYWLGNALYAL--------RDYKGSTSVWQ 189

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
            +V++Y   P    A               + I    L++G+  AA    + ++A Y  +
Sbjct: 190 GVVQKYPQHPRAPEAL--------------LAIANNQLEQGQKAAAKKTLEQIVAQYGGS 235

Query: 224 EHAEEAMARLVE 235
           + A+ A ++L +
Sbjct: 236 DVAQSAQSKLSQ 247


>gi|197119877|ref|YP_002140304.1| TPR domain-containing protein [Geobacter bemidjiensis Bem]
 gi|197089237|gb|ACH40508.1| TPR domain lipoprotein [Geobacter bemidjiensis Bem]
          Length = 283

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 48/146 (32%), Gaps = 8/146 (5%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
           +    +   +         +    +Y+K    +KE N  KA E F+      P   +A  
Sbjct: 142 MAKMEKGVEEQAKKEAELQQAPEYLYQKGYEAMKEGNLPKARELFSSFLEHHPKHNLAAN 201

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +        YS  K++ A    E  I  YP            GM++         +   +
Sbjct: 202 AQYWIGESYYSEKKFENAVLEFENVIKNYPNKDKAPAAMLKQGMAF--------RELGDS 253

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFY 181
           K     + ++VE +  S   K AR  
Sbjct: 254 KSANYILKKLVEEHPKSEEAKIAREK 279



 Score = 47.8 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 41/110 (37%), Gaps = 14/110 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              +  S  +E +        A+++              IG  Y    ++  A+  F+ V
Sbjct: 181 KARELFSSFLEHHPKHNLAANAQYW--------------IGESYYSEKKFENAVLEFENV 226

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
           + NY + + A  AM +   A+  L     A  ++  + E +P+   A+  
Sbjct: 227 IKNYPNKDKAPAAMLKQGMAFRELGDSKSANYILKKLVEEHPKSEEAKIA 276


>gi|237746663|ref|ZP_04577143.1| tol-Pal cell envelope complex subunit YbgF [Oxalobacter formigenes
           HOxBLS]
 gi|229378014|gb|EEO28105.1| tol-Pal cell envelope complex subunit YbgF [Oxalobacter formigenes
           HOxBLS]
          Length = 245

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 46/137 (33%), Gaps = 8/137 (5%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             VT    + + Y +A       ++  A   ++   + FP + +A K+        Y  G
Sbjct: 116 KEVTVEADEGQSYSRAEELFAAADYKGAVSAYSDFLKRFPKSHLAAKAQYQLGNAYYMQG 175

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
            Y+ A       + +YP++                 +       +      + +S +V +
Sbjct: 176 DYKSALKNQSAVVRRYPKNPITPEA--------MLNMASCQIGLKDLASAKKTLSELVRK 227

Query: 169 YTNSPYVKGARFYVTVG 185
           Y  S   KGA+  +   
Sbjct: 228 YPASEAAKGAKERLAQL 244



 Score = 53.6 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 14/113 (12%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           K  +   S  ++R+  S     A++ +              G  Y  +G+Y +A+     
Sbjct: 141 KGAVSAYSDFLKRFPKSHLAAKAQYQL--------------GNAYYMQGDYKSALKNQSA 186

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           V+  Y       EAM  +    + L  +  A++ +S +  +YP    A+  + 
Sbjct: 187 VVRRYPKNPITPEAMLNMASCQIGLKDLASAKKTLSELVRKYPASEAAKGAKE 239



 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 49/131 (37%), Gaps = 22/131 (16%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           ++A  Y+ A S   +++ ++P+S       Y +G +Y          Q   K  L+  S 
Sbjct: 135 FAAADYKGAVSAYSDFLKRFPKSHLAAKAQYQLGNAYYM--------QGDYKSALKNQSA 186

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V RY  +P    A   +   +  L               +  +A      ++  Y  +E
Sbjct: 187 VVRRYPKNPITPEAMLNMASCQIGL--------------KDLASAKKTLSELVRKYPASE 232

Query: 225 HAEEAMARLVE 235
            A+ A  RL +
Sbjct: 233 AAKGAKERLAQ 243


>gi|291569640|dbj|BAI91912.1| serine/threonine protein kinase containing TPR domain [Arthrospira
           platensis NIES-39]
          Length = 732

 Score = 66.7 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 69/206 (33%), Gaps = 32/206 (15%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L     IA   LVG          L+    V+ +  + ++ V  L+  +   A + FN+ 
Sbjct: 311 LWTVVGIAATGLVGLMVIFGLFQVLNRPDPVKSEAAL-KRGVERLEAGDPEAAIKAFNRS 369

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
            + FP    A +     A   Y   KY+QA +   + I   P + ++   Y+   ++Y Q
Sbjct: 370 IQLFPDNSEAFR---KRANAYYDLQKYEQAIADYTQAIKLDPTNPDI---YFNRSLAYHQ 423

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
           M              +  +++++                   +  LA            +
Sbjct: 424 M--------GDFGNAINDLNQVIRLNPEDTDA--------FYQRGLAHY---------TQ 458

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEA 229
             Y AAI  +  V+    D   A  A
Sbjct: 459 ENYEAAILDYTEVIRRQPDHSEAYRA 484



 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 58/181 (32%), Gaps = 33/181 (18%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y++ +    ++N+  A   + +  R  P    A ++          AG  Q   +   E 
Sbjct: 449 YQRGLAHYTQENYEAAILDYTEVIRRQPDHSEAYRAR---GSAHVKAGNLQAGMADYTEA 505

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           I   P+S      YY  G +   +           +  L   ++++    ++     A  
Sbjct: 506 IRLNPQSAA---AYYNRGRARFHL--------GDYQGALADYNQVISWEPDN-----AEA 549

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA-EHAEEAMARL-VEAYV 238
           Y                  Y+  G Y AAI      +     A ++    +A L V+ Y 
Sbjct: 550 YGNRCST------------YINLGNYEAAIESCSRSIQLNPTAMDYNNRCIAYLNVQNYD 597

Query: 239 A 239
           A
Sbjct: 598 A 598



 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 24/87 (27%), Gaps = 19/87 (21%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ------Y- 105
           + +     Y +        ++  A   +NQ     P           +A         Y 
Sbjct: 509 NPQSAAAYYNRGRARFHLGDYQGALADYNQVISWEP----------DNAEAYGNRCSTYI 558

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDY 132
           + G Y+ A       I   P    +DY
Sbjct: 559 NLGNYEAAIESCSRSIQLNPT--AMDY 583


>gi|311747248|ref|ZP_07721033.1| putative ATP synthase F1, delta subunit [Algoriphagus sp. PR1]
 gi|126578959|gb|EAZ83123.1| putative ATP synthase F1, delta subunit [Algoriphagus sp. PR1]
          Length = 995

 Score = 66.7 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 69/219 (31%), Gaps = 31/219 (14%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            Y  AV+   + N  +A    N     +P +     +L     +      Y +A+    +
Sbjct: 581 YYRLAVVQNFQNNNQQALGQLNTLISRYPNSLYYEDALFQKGQINMEETNYSEASRAFSD 640

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            IT  P S  V Y      ++   M        +  +  +     I++++ N+   + A 
Sbjct: 641 LITGKPNSPFVPYALESRAVANFSM--------QNYEQTISDYKTILDKHPNAQNSETAL 692

Query: 180 FYVTVGR----------NQLAAK-------------EVEIGRYYLKRGEYVAAIPRFQLV 216
             +              + LA               E E  +       Y  A    +  
Sbjct: 693 KGLQETLALQGRSGEFSDYLARYKGSNPSSSSVQTLEFESAKSMYFDKNYTQASKALENY 752

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           L NY  +    +A+  L ++Y  L    +A E    +++
Sbjct: 753 LRNYPQSAQRLDALYFLGDSYFQLGDKTKALEQFKALEQ 791



 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 71/208 (34%), Gaps = 29/208 (13%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYF----NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
           + +Y     +   Q +S+A E F    ++             ++L      Y   ++ +A
Sbjct: 504 KSLYGLGYSYFNSQQYSRAEEEFKTYTDRLRSRQNKENY-DDAMLRLGDCYYVQKRFSEA 562

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
           ++  ++       +K +DY YY + +                +  L  ++ ++ RY NS 
Sbjct: 563 SATFQQ--AINDGNKGIDYAYYRLAVVQNFQN--------NNQQALGQLNTLISRYPNSL 612

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
           Y + A                + G+  ++   Y  A   F  ++    ++     A+   
Sbjct: 613 YYEDAL--------------FQKGQINMEETNYSEASRAFSDLITGKPNSPFVPYALESR 658

Query: 234 VEAYVALALMDEAREVVSLIQERYPQGY 261
             A  ++   ++       I +++P   
Sbjct: 659 AVANFSMQNYEQTISDYKTILDKHPNAQ 686



 Score = 39.7 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 26/212 (12%), Positives = 67/212 (31%), Gaps = 28/212 (13%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           +E A     ++N+++A +      R++P +     +L       +  G   +A    +  
Sbjct: 730 FESAKSMYFDKNYTQASKALENYLRNYPQSAQRLDALYFLGDSYFQLGDKTKALEQFKA- 788

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           + Q P S       + +G+        +  +    +  + Y+               AR 
Sbjct: 789 LEQEPASPQRLRAMHRIGI--------MELELGNFEQAIPYLKTS---------AANARS 831

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN---YSDAEHAEEAMARLVEAY 237
            +       A + + +  +  +  +Y  AI     +L       ++    +A+    ++ 
Sbjct: 832 KIEEAE---AVEGLMVANF--ETRKYNEAISNADQLLTLDGIIPES--TPKALLTKAKSE 884

Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETL 269
                  +A   +  +   Y     A  +  L
Sbjct: 885 RETNQKADAEITLMTLVNEYKTIQGAEGLYWL 916



 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 83/260 (31%), Gaps = 59/260 (22%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN----------QCSRDFPFAGVAR 94
           + Y++S      + E+Y+  +   + +N+ +A EY            Q S  +      +
Sbjct: 268 EAYINSRKGTLSREEIYKAGISLFEIENYPRAAEYLKNSASATDELGQASSYYLGHAYLK 327

Query: 95  K-------------------------SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
           +                         +L+  A V    G +Q A +  ++Y+ +YP   +
Sbjct: 328 QENFQFASTSFAAAAKSDFNKQIQEDALVNYAKVNLQKGSFQLAITALDDYLEKYPNGSH 387

Query: 130 VDYVY------------YLVGMSYAQMI-RDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
              +             YL  +     I       Q A + +     + +  Y +  Y  
Sbjct: 388 KAEMETLLSEALVNTNDYLRAIEQMDRITNKSARIQTAYQKV--AFYQAMVYYRDQRY-D 444

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA------AIPRFQLVLANYSDAEHAE--E 228
           GA  Y+         K + +  ++ K   Y A      AI  +Q  ++       A   +
Sbjct: 445 GAIAYLDKSLAYPIDKTMVLESHFWKGESYSADGNLPEAIKSYQQAISLGRTTSSAYLTK 504

Query: 229 AMARLVEAYVALALMDEARE 248
           ++  L  +Y        A E
Sbjct: 505 SLYGLGYSYFNSQQYSRAEE 524


>gi|332525606|ref|ZP_08401761.1| putative transmembrane protein [Rubrivivax benzoatilyticus JA2]
 gi|332109171|gb|EGJ10094.1| putative transmembrane protein [Rubrivivax benzoatilyticus JA2]
          Length = 247

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 20/133 (15%), Positives = 48/133 (36%), Gaps = 8/133 (6%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
              +R  YE A+  L+  +F KA    +     +P +G    +       QY    Y+ A
Sbjct: 123 TADERAAYEDAMGVLRTGDFDKASTALSGFLTRYPSSGYVDSARFWLGNAQYGRRDYKGA 182

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
            +    ++   P+         L+ ++ +Q       + + T+   + +  +++ Y  S 
Sbjct: 183 IASFRAFVAAAPQHPRAPEA--LLALANSQA------EAKDTRAARRTIDELLKTYPKSE 234

Query: 174 YVKGARFYVTVGR 186
                +  +   +
Sbjct: 235 AAVAGKERLASLK 247



 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 38/109 (34%), Gaps = 14/109 (12%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
                    +S  + RY +S YV  ARF++   +                R +Y  AI  
Sbjct: 140 GDFDKASTALSGFLTRYPSSGYVDSARFWLGNAQ--------------YGRRDYKGAIAS 185

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           F+  +A       A EA+  L  +         AR  +  + + YP+  
Sbjct: 186 FRAFVAAAPQHPRAPEALLALANSQAEAKDTRAARRTIDELLKTYPKSE 234



 Score = 36.2 bits (83), Expect = 5.4,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 39/129 (30%), Gaps = 22/129 (17%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
             G + +A++    ++T+YP S  VD   + +G +            R  K  +      
Sbjct: 138 RTGDFDKASTALSGFLTRYPSSGYVDSARFWLGNAQYGR--------RDYKGAIASFRAF 189

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           V      P    A   +    N  A              +  AA      +L  Y  +E 
Sbjct: 190 VAAAPQHPRAPEA---LLALANSQAE-----------AKDTRAARRTIDELLKTYPKSEA 235

Query: 226 AEEAMARLV 234
           A     RL 
Sbjct: 236 AVAGKERLA 244


>gi|237738478|ref|ZP_04568959.1| tetratricopeptide repeat family protein [Fusobacterium mortiferum
           ATCC 9817]
 gi|229420358|gb|EEO35405.1| tetratricopeptide repeat family protein [Fusobacterium mortiferum
           ATCC 9817]
          Length = 942

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 42/216 (19%), Positives = 76/216 (35%), Gaps = 26/216 (12%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG-VARKSLLMSAFVQYSAGKYQQA 113
                VY + +  +    +  A  YF    +D      +  K         +   KY+ A
Sbjct: 506 SSPNSVYLRGIASMGMGKYQDASNYFIIVEQDTTTTPELMEKIKFNKLRNAFLWEKYEDA 565

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
              GEEYI+QYP  +N   V     +SY +M           +   +Y +++      + 
Sbjct: 566 IKYGEEYISQYPNGENRAEVLDKTALSYFRMDN--------FEKSKEYYTQLQSIPNYNE 617

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
           Y                    +I   Y  +G+Y  A+ ++Q V   Y D+++ E A    
Sbjct: 618 YAT-----------------FQIADSYYAQGKYDEALGKYQEVYTKYPDSKYGESANYWY 660

Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
           + + + L   DE  +      ++YP       +  L
Sbjct: 661 LNSLINLKKYDEFEKAKEEFIKKYPNSEMKENIYIL 696



 Score = 54.0 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 80/211 (37%), Gaps = 29/211 (13%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
           +G +  S   + L    +  Y++ +Y+    +L ++N+  A E F +             
Sbjct: 110 IGDKNSSEEYLKLIDTKNEYYEKAIYDTGTTYLSQENYPLAEESFQRIIALN--GKYYND 167

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           ++L  + + Y+ G Y ++ +   +Y     + KN+ ++ YL+G SY ++ +         
Sbjct: 168 AILSMSLLSYNKGDYNRSIAYLNQYAQLK-DKKNIVFMNYLLGSSYYKLNQ--------V 218

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
            L  +Y    V+   +S Y + A   +                 Y  +GE    + + Q 
Sbjct: 219 DLATRYFEESVKESKDSTYGRKASLNLVEI--------------YSNKGE----LEKAQG 260

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEA 246
            +    +     E M  L ++Y       +A
Sbjct: 261 KIDILQNTPDYSEGMRILGDSYATKGDYQKA 291


>gi|293397220|ref|ZP_06641493.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
 gi|291420240|gb|EFE93496.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
          Length = 261

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 45/124 (36%), Gaps = 9/124 (7%)

Query: 61  YEKAVL-FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  AV   L+++ + +A   F    + +P +     +      + Y+ GK   AA     
Sbjct: 145 YNAAVSLALEKKQYDQAISAFQGFIKQYPKSTYQPNANYWLGQLFYNKGKKDDAAYYFAV 204

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       Y VG+        +  ++           +++++Y  S   K A 
Sbjct: 205 VVKNYPKSPKAPDAMYKVGI--------IMQEKGQADKAKAVFQQVIKQYPTSDAAKQAN 256

Query: 180 FYVT 183
             + 
Sbjct: 257 KRIA 260



 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 47/129 (36%), Gaps = 14/129 (10%)

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           S       +  +++     +      +++Y  S Y   A +++                +
Sbjct: 143 SDYNAAVSLALEKKQYDQAISAFQGFIKQYPKSTYQPNANYWLGQL-------------F 189

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           Y K  +  AA   F +V+ NY  +  A +AM ++          D+A+ V   + ++YP 
Sbjct: 190 YNKGKKDDAA-YYFAVVVKNYPKSPKAPDAMYKVGIIMQEKGQADKAKAVFQQVIKQYPT 248

Query: 260 GYWARYVET 268
              A+    
Sbjct: 249 SDAAKQANK 257



 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 29/83 (34%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                     Y    LF  +     A  YF    +++P +  A  ++     +    G+ 
Sbjct: 173 PKSTYQPNANYWLGQLFYNKGKKDDAAYYFAVVVKNYPKSPKAPDAMYKVGIIMQEKGQA 232

Query: 111 QQAASLGEEYITQYPESKNVDYV 133
            +A ++ ++ I QYP S      
Sbjct: 233 DKAKAVFQQVIKQYPTSDAAKQA 255


>gi|262382545|ref|ZP_06075682.1| TPR repeat-containing protein [Bacteroides sp. 2_1_33B]
 gi|262295423|gb|EEY83354.1| TPR repeat-containing protein [Bacteroides sp. 2_1_33B]
          Length = 999

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/239 (12%), Positives = 72/239 (30%), Gaps = 45/239 (18%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
               + +   + ++  ++KA   +     +       +   +     +  +   +Y +A 
Sbjct: 466 NDAYFWRGESYYRQGEYNKAISDYRTYLNNTRQRNTDMYALAHYNLGYSYFKLKEYGEAL 525

Query: 115 SLGEEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM-------------- 158
           +   +Y+      ++      Y  +G       +    ++  T+                
Sbjct: 526 NRFRQYVNMESNQQTPAYADAYNRIGDCLFHNRQFAMAEENYTRAAQLQPSAGDYSVYQK 585

Query: 159 -------------LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
                        +  M R++  +  S YV  A                E GR Y+    
Sbjct: 586 GFLLGLQKDYKGKISVMDRLIREFPESQYVDDAL--------------FEKGRSYVLLDN 631

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
             AA   F+ ++ ++  +  A +A  +L   Y      ++A E    +   YP    A+
Sbjct: 632 NQAAAASFEQLMRDFPQSSLARKAGVQLGLIYFNDNQPEKAAEAYKSVISNYPGSEEAK 690



 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 70/197 (35%), Gaps = 31/197 (15%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++      + E+N+++A +          ++   +  LL           Y+   S+ + 
Sbjct: 554 LFHNRQFAMAEENYTRAAQLQPSAGD---YSVYQKGFLLGL------QKDYKGKISVMDR 604

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            I ++PES+ VD   +  G SY  +  +        +       +++  +  S   + A 
Sbjct: 605 LIREFPESQYVDDALFEKGRSYVLLDNN--------QAAAASFEQLMRDFPQSSLARKAG 656

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             + +               Y    +   A   ++ V++NY  +E A+ A+  L   Y+ 
Sbjct: 657 VQLGLI--------------YFNDNQPEKAAEAYKSVISNYPGSEEAKVALQDLKSVYIE 702

Query: 240 LALMDEAREVVSLIQER 256
           L  ++      + +   
Sbjct: 703 LNDINSFAAYANSLGGN 719



 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 48/268 (17%), Positives = 93/268 (34%), Gaps = 57/268 (21%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
             I +C +VG    S +  Y            ++ +       +N+S   +      +  
Sbjct: 4   ILIPLCLVVGSHMASGQRSY-----QFDAPNRLFVEGKELFSLKNYSGCIDKLEAYKQHS 58

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM--- 144
               + +++  M  +  Y  G+   A  L ++Y+  YP S++ D V +L+G ++      
Sbjct: 59  TDVDLIQEADYMLVYSAYEQGR-PNAVELLKDYLDVYPASRHADEVNFLIGSAHFGQGEY 117

Query: 145 -----------IRDVPYDQRAT---------------KLMLQYMSRIVERYTNSPYVKGA 178
                      I  +  +Q+                 +    Y +RI +    + Y + +
Sbjct: 118 QKAIFWFNESNIDMLSPEQQEAYCFRLAYSLLQTGDMEKARGYFARIEQI--GTKYREAS 175

Query: 179 RFYVTVG-------RNQLAA----------KE---VEIGRYYLKRGEYVAAIPRFQLVLA 218
            +YV           N L            KE     I + Y  + +Y   I   + +LA
Sbjct: 176 TYYVAYIDYATGKYNNALVEFTRLKDLPDYKERSLYYITQIYFIQNKYEKVISEGKELLA 235

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEA 246
           +Y D+E+  E    +  AY  L   D+A
Sbjct: 236 SYPDSENNSEVYRIMGNAYYHLRNEDQA 263



 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 76/234 (32%), Gaps = 36/234 (15%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-KSLLMSAFVQYSAGKYQQAASLGE 118
           +++            KA + F++      +   +R  +        Y  G+Y +A S   
Sbjct: 431 LFQLGTQAFTNMELDKAVDLFSRAISLGAYNLESRNDAYFWRGESYYRQGEYNKAISDYR 490

Query: 119 EYITQYPESKNVD-YVY--YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SP 173
            Y+      +N D Y    Y +G SY ++        +     L    + V   +N  +P
Sbjct: 491 TYLN-NTRQRNTDMYALAHYNLGYSYFKL--------KEYGEALNRFRQYVNMESNQQTP 541

Query: 174 YVKGARFYVTVG-------------RNQLAAKEVEIGRY--YLK------RGEYVAAIPR 212
               A   +                  + A  +   G Y  Y K      + +Y   I  
Sbjct: 542 AYADAYNRIGDCLFHNRQFAMAEENYTRAAQLQPSAGDYSVYQKGFLLGLQKDYKGKISV 601

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
              ++  + ++++ ++A+     +YV L     A      +   +PQ   AR  
Sbjct: 602 MDRLIREFPESQYVDDALFEKGRSYVLLDNNQAAAASFEQLMRDFPQSSLARKA 655



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 36/84 (42%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                    ++EK   ++   N   A   F Q  RDFP + +ARK+ +    + ++  + 
Sbjct: 610 PESQYVDDALFEKGRSYVLLDNNQAAAASFEQLMRDFPQSSLARKAGVQLGLIYFNDNQP 669

Query: 111 QQAASLGEEYITQYPESKNVDYVY 134
           ++AA   +  I+ YP S+      
Sbjct: 670 EKAAEAYKSVISNYPGSEEAKVAL 693



 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 49/167 (29%), Gaps = 32/167 (19%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S TD   + ++Y   V +  + N+S A     +  R+     +++ + L           
Sbjct: 272 SSTDSPLRGDLYILGVCYYNKGNYSSAVNALGRTVREN--DALSQNAYLYLGQSYLKLKD 329

Query: 110 YQQAASLGE-----EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
              A    E      +     + K      Y    +YA +I +  +        +     
Sbjct: 330 KNNARMAFEAAATSSFDK---QVKEA--AMY----NYALLIHETAF--TGFGESVTIFED 378

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
            +  + NS Y      Y+                 YL    Y AA+ 
Sbjct: 379 FLNDFPNSKYADKVNDYLVEV--------------YLTTKNYQAALN 411


>gi|198273957|ref|ZP_03206489.1| hypothetical protein BACPLE_00093 [Bacteroides plebeius DSM 17135]
 gi|198273035|gb|EDY97304.1| hypothetical protein BACPLE_00093 [Bacteroides plebeius DSM 17135]
          Length = 1005

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 81/227 (35%), Gaps = 46/227 (20%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
             +  D  +       +YE+   F++ ++   A + ++   + +P + ++RK+      +
Sbjct: 607 NKLITDYPSSAYLDDALYEQGRAFVQMEDSENAIKRYSLLVQRYPESELSRKAANEIGLL 666

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVY---------------YLV------GMSYA 142
            Y   +Y++A +  ++ IT+YP S                      Y+       G +  
Sbjct: 667 YYQNDRYEEAIAAYKQVITKYPGSAEARLAQRDLKSIYVDLNKVDDYMAFASTVPGGATF 726

Query: 143 QMIRDVPYDQRATKLML---------QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
            +         A +              ++R ++ +    +   A +Y+ +         
Sbjct: 727 NVSERDSLTYTAAERAYMRGDIAGAKTSLTRYLQSFPQGAFSVDASYYLGLID------- 779

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE-AYVA 239
                    + +Y AA  R + VL  +S +++  +A+A   + AY  
Sbjct: 780 -------YNQKDYAAAAARLEEVLR-FSGSKYEGKALALCADMAYNQ 818



 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 34/145 (23%), Positives = 53/145 (36%), Gaps = 22/145 (15%)

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
              Y     +  + IT YP S  +D   Y  G ++ QM          ++  ++  S +V
Sbjct: 596 QRDYAGKIQVLNKLITDYPSSAYLDDALYEQGRAFVQM--------EDSENAIKRYSLLV 647

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
           +RY  S   + A                EIG  Y +   Y  AI  ++ V+  Y  +  A
Sbjct: 648 QRYPESELSRKAAN--------------EIGLLYYQNDRYEEAIAAYKQVITKYPGSAEA 693

Query: 227 EEAMARLVEAYVALALMDEAREVVS 251
             A   L   YV L  +D+     S
Sbjct: 694 RLAQRDLKSIYVDLNKVDDYMAFAS 718



 Score = 43.6 bits (102), Expect = 0.034,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 87/215 (40%), Gaps = 28/215 (13%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLG 117
           +Y       K++ ++ A ++F +C ++       VA  +        +   ++++A    
Sbjct: 512 LYCLGYSLFKQKQYNSARDWFVRCVQNGRTQEASVAGDAYNRIGDCYFYERRFEEAR--- 568

Query: 118 EEYITQYPESKNV-DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
           ++Y      S ++ DY  +  G+     ++ +  D       +Q +++++  Y +S Y+ 
Sbjct: 569 QQYAQAVVTSPSLGDYSLFQEGI-----VKGLQRD--YAGK-IQVLNKLITDYPSSAYLD 620

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
            A                E GR +++  +   AI R+ L++  Y ++E + +A   +   
Sbjct: 621 DAL--------------YEQGRAFVQMEDSENAIKRYSLLVQRYPESELSRKAANEIGLL 666

Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           Y      +EA      +  +YP    AR  +  +K
Sbjct: 667 YYQNDRYEEAIAAYKQVITKYPGSAEARLAQRDLK 701



 Score = 38.9 bits (90), Expect = 0.78,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 83/232 (35%), Gaps = 28/232 (12%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAAS 115
           ++        + ++  A +YF +  +        +K+   + +     +Y   +Y +AA+
Sbjct: 435 LFRMGTQLFAQADYRNAIDYFTRSLQL---GQYNQKTKADAYYWRGESKYRLERYPEAAN 491

Query: 116 LGEEYITQYPESKNVDY--VYYLVGMSYAQMIR-DVPYD----------QRATKLMLQYM 162
               Y+    +  + +Y    Y +G S  +  + +   D           +   +     
Sbjct: 492 DMRLYLEFASDKNSQEYGLALYCLGYSLFKQKQYNSARDWFVRCVQNGRTQEASVAGDAY 551

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN---QLAAKEVE---IGRYYLKRGEYVAAIPRFQLV 216
           +RI + Y      + AR            L    +    I +   +  +Y   I     +
Sbjct: 552 NRIGDCYFYERRFEEARQQYAQAVVTSPSLGDYSLFQEGIVKGLQR--DYAGKIQVLNKL 609

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           + +Y  + + ++A+     A+V +   + A +  SL+ +RYP+   +R    
Sbjct: 610 ITDYPSSAYLDDALYEQGRAFVQMEDSENAIKRYSLLVQRYPESELSRKAAN 661



 Score = 35.5 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 27/59 (45%), Gaps = 1/59 (1%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y   ++   +++++ A     +    F  +    K+L + A + Y+  +Y +A +L + 
Sbjct: 773 YYLGLIDYNQKDYAAAAARLEEVL-RFSGSKYEGKALALCADMAYNQKEYAKALNLYKR 830



 Score = 35.5 bits (81), Expect = 8.5,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 68/197 (34%), Gaps = 36/197 (18%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
             L   +   +   VY  A +   +Q +  A + F +   D  F  +A       A +  
Sbjct: 166 AVLKETSKDFHNDAVYNLAYIDYVQQKYDTALQGFREVQDDRKFQKLAP---YYIADIYL 222

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
             G Y QA  + + Y+  Y E K+   +         ++  +  Y Q+     +Q + R 
Sbjct: 223 IKGNYAQARKVADAYLALYSEEKHAAQM--------NRISGEAAYGQKDYAAAIQSLERY 274

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
            E        +            LA  ++  G  Y   G Y  A+ R          A  
Sbjct: 275 HE-------AEEVPAR-------LAMYKL--GMSYFNTGVYSKALSRLGE-------ATG 311

Query: 226 AEEAMARLVEAYVALAL 242
           A++A+A    AY+ + L
Sbjct: 312 AQDALA--QNAYLHMGL 326


>gi|315453520|ref|YP_004073790.1| putative lipoprotein [Helicobacter felis ATCC 49179]
 gi|315132572|emb|CBY83200.1| putative lipoprotein [Helicobacter felis ATCC 49179]
          Length = 213

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 72/200 (36%), Gaps = 12/200 (6%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            ++ S+A   L     + ++D   +           Y+  +  +   N   A  Y++   
Sbjct: 3   VLWLSLACALLWLGCAKKNKDAIYNRPAIFW-----YQGILREILFMNLETADNYYSSLQ 57

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
            +   + +   ++L          ++  A    +EYI ++    NVDY+ YL   +    
Sbjct: 58  SEHINSPLVPVAMLALGQAHLKKKEFVLAEYYFDEYIKRFGNESNVDYLKYLKLQARYYS 117

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE--IGRYYLK 202
            ++   DQ      +  ++  V++Y NS ++    +     +  L   E+   I   Y K
Sbjct: 118 FKNHSKDQEFMSNTIGMLNDFVDKYPNSRFINQVEYM--QVKFILGQNELNRAIANVYKK 175

Query: 203 RGEYVAA---IPRFQLVLAN 219
           R +       + R   VL  
Sbjct: 176 RHQKEGVKRYLDRVDEVLEK 195


>gi|238765243|ref|ZP_04626172.1| hypothetical protein ykris0001_32580 [Yersinia kristensenii ATCC
           33638]
 gi|238696515|gb|EEP89303.1| hypothetical protein ykris0001_32580 [Yersinia kristensenii ATCC
           33638]
          Length = 260

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 49/126 (38%), Gaps = 9/126 (7%)

Query: 61  YEKAVL-FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  AV   L+++ + +A   F    + +P +     +      + Y+ GK   AA     
Sbjct: 143 YNAAVSLALEKKQYDQAITAFQGFVKQYPKSTYQPNANYWLGQLYYNKGKKDDAAYYYAV 202

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       + VG+        +  D+  +        +++++Y N+   K A+
Sbjct: 203 VVKNYPKSPKSSEAMFKVGV--------IMQDKGQSDKAKAVYQQVIKQYPNTDAAKQAQ 254

Query: 180 FYVTVG 185
             ++  
Sbjct: 255 KRLSAL 260



 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 14/129 (10%)

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           S       +  +++     +      V++Y  S Y   A +++              G+ 
Sbjct: 141 SDYNAAVSLALEKKQYDQAITAFQGFVKQYPKSTYQPNANYWL--------------GQL 186

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           Y  +G+   A   + +V+ NY  +  + EAM ++          D+A+ V   + ++YP 
Sbjct: 187 YYNKGKKDDAAYYYAVVVKNYPKSPKSSEAMFKVGVIMQDKGQSDKAKAVYQQVIKQYPN 246

Query: 260 GYWARYVET 268
              A+  + 
Sbjct: 247 TDAAKQAQK 255


>gi|238790500|ref|ZP_04634269.1| hypothetical protein yfred0001_12300 [Yersinia frederiksenii ATCC
           33641]
 gi|238721444|gb|EEQ13115.1| hypothetical protein yfred0001_12300 [Yersinia frederiksenii ATCC
           33641]
          Length = 260

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 52/156 (33%), Gaps = 9/156 (5%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVL-FLKEQNFSKAYEYFNQCSRDFPF 89
           A           +             +   Y  AV   L+++ + +A   F    + +P 
Sbjct: 113 AATGSSDTATAGAAAATAAPAASTGDENSDYNAAVSLALEKKQYDQAITAFQSFVKQYPK 172

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +     +      + Y+ GK   AA      +  YP+S       + VG+        + 
Sbjct: 173 STYQPNANYWLGQLYYNKGKKDDAAYYYAVVVKNYPKSPKSSEAMFKVGV--------IM 224

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            D+  +        +++++Y N+   K A+  ++  
Sbjct: 225 QDKGQSDKAKAVYQQVIKQYPNTDAAKQAQKRLSAL 260



 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 14/129 (10%)

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           S       +  +++     +      V++Y  S Y   A +++              G+ 
Sbjct: 141 SDYNAAVSLALEKKQYDQAITAFQSFVKQYPKSTYQPNANYWL--------------GQL 186

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           Y  +G+   A   + +V+ NY  +  + EAM ++          D+A+ V   + ++YP 
Sbjct: 187 YYNKGKKDDAAYYYAVVVKNYPKSPKSSEAMFKVGVIMQDKGQSDKAKAVYQQVIKQYPN 246

Query: 260 GYWARYVET 268
              A+  + 
Sbjct: 247 TDAAKQAQK 255


>gi|212703389|ref|ZP_03311517.1| hypothetical protein DESPIG_01432 [Desulfovibrio piger ATCC 29098]
 gi|212673235|gb|EEB33718.1| hypothetical protein DESPIG_01432 [Desulfovibrio piger ATCC 29098]
          Length = 161

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 55/145 (37%), Gaps = 8/145 (5%)

Query: 35  LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94
                 Q +                +Y+  +   + + + +A   F    +++P   +A 
Sbjct: 18  TGSTWGQPTPQPEAKPAAKKDISLALYDAGLNAFQARKYDEAQRSFADFMKNYPTHSMAP 77

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
            +    A   +   ++  AA   +  IT++ +S      Y   G+ +++M      +Q+A
Sbjct: 78  DAQYYLAECYFQRNQFPDAALAYDTVITKFSKSNRTPGAYLKQGICFSKM------NQKA 131

Query: 155 TKLMLQYMSRIVERYTNSPYVKGAR 179
                  M+ ++++Y NSP    A+
Sbjct: 132 AAKAR--MNELIKKYPNSPEAARAK 154



 Score = 51.7 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/144 (13%), Positives = 48/144 (33%), Gaps = 22/144 (15%)

Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           K++    Y  G++  Q         R      +  +  ++ Y        A++Y+     
Sbjct: 37  KDISLALYDAGLNAFQA--------RKYDEAQRSFADFMKNYPTHSMAPDAQYYLAEC-- 86

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
                       Y +R ++  A   +  V+  +S +     A  +    +  +     A+
Sbjct: 87  ------------YFQRNQFPDAALAYDTVITKFSKSNRTPGAYLKQGICFSKMNQKAAAK 134

Query: 248 EVVSLIQERYPQGYWARYVETLVK 271
             ++ + ++YP    A   +  +K
Sbjct: 135 ARMNELIKKYPNSPEAARAKNFLK 158


>gi|91776689|ref|YP_546445.1| tetratricopeptide region [Methylobacillus flagellatus KT]
 gi|91710676|gb|ABE50604.1| Tetratricopeptide region [Methylobacillus flagellatus KT]
          Length = 274

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 58/138 (42%), Gaps = 9/138 (6%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
            ++  D    R++ E A        F +A++ + +  + +P + +   +LL     Q+S 
Sbjct: 140 PNNNADNPEARDL-EAARALAASGKFKEAFDAYGKFLQTYPRSALVPDALLGLGSAQFSL 198

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
             Y+ + S  ++ I+Q+PES  V    + +  S    I+    D        + +  +++
Sbjct: 199 KNYKASISTQQKLISQHPESDKVPDAMFSIANS---QIQLSDVD-----GAKKTLRELLD 250

Query: 168 RYTNSPYVKGARFYVTVG 185
           ++ +      A+  + V 
Sbjct: 251 KFPDHELAPSAKRRLNVL 268



 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 42/104 (40%), Gaps = 14/104 (13%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           K       + ++ Y  S  V  A   +   +  L                Y A+I   Q 
Sbjct: 165 KEAFDAYGKFLQTYPRSALVPDALLGLGSAQFSL--------------KNYKASISTQQK 210

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           +++ + +++   +AM  +  + + L+ +D A++ +  + +++P 
Sbjct: 211 LISQHPESDKVPDAMFSIANSQIQLSDVDGAKKTLRELLDKFPD 254


>gi|312888741|ref|ZP_07748306.1| TPR repeat-containing protein [Mucilaginibacter paludis DSM 18603]
 gi|311298785|gb|EFQ75889.1| TPR repeat-containing protein [Mucilaginibacter paludis DSM 18603]
          Length = 1020

 Score = 66.3 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 71/227 (31%), Gaps = 38/227 (16%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++++ ++   +          N     FP +  A  S    A+  +  G   +A S    
Sbjct: 591 LFQRGMIQGLQGALDSKINTLNSVLSQFPNSNYADDSAFEIAYAYFMKGNGDKAISDLLA 650

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            I +YP S  +      +G+      +D         L ++   ++V+ Y ++   K A 
Sbjct: 651 MIAKYPRSSYIPRALVTIGLVNYNAGKD--------DLAVESFKQVVKDYPSTDEAKQAL 702

Query: 180 FYVTVGRN--------------------QLAAKE--VEIG--RYYLKRGEYVAAIPRFQL 215
             +                           A +E  +       YLK G++   +     
Sbjct: 703 KQIEKIYTDKGDAQTFITYAATTPIGNYTTAQQESIMYTAANNLYLK-GDWQGTVNAVNG 761

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
               +    + +++     ++ V+L   DEA     +    Y    W
Sbjct: 762 YFDKFPKPIYDKQSKFIRAQSLVSLNRGDEA-----VNDYNYILNDW 803



 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 67/207 (32%), Gaps = 39/207 (18%)

Query: 68  LKEQNFSKAYEYFNQCSRDFPFAGVARK--------SLLMSAFVQYSAGKYQQAASLGEE 119
             ++ + KA  YF +          A +        ++  +A   +    Y +A    + 
Sbjct: 526 FGDEQYKKAATYFERFLA-------AEQLDKNSINDAITRTADSYFVMKNYGKAMDYYDR 578

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            I  + + +  DY  +  GM        +   Q A    +  ++ ++ ++ NS Y   + 
Sbjct: 579 IINGHEKGE--DYALFQRGM--------IQGLQGALDSKINTLNSVLSQFPNSNYADDSA 628

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                          EI   Y  +G    AI     ++A Y  + +   A+  +      
Sbjct: 629 --------------FEIAYAYFMKGNGDKAISDLLAMIAKYPRSSYIPRALVTIGLVNYN 674

Query: 240 LALMDEAREVVSLIQERYPQGYWARYV 266
               D A E    + + YP    A+  
Sbjct: 675 AGKDDLAVESFKQVVKDYPSTDEAKQA 701



 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 36/102 (35%), Gaps = 19/102 (18%)

Query: 59  EVYEK---AVLFLKEQNFSKAYEYFNQCS--RDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
           E+Y     AV    +  +  A E F      R  P +    +S L          +Y +A
Sbjct: 28  EIYRTFHAAVDLFDKGAYVAAAEQFRMVEKSRLMPSSQPEFESQLSLLK---ENCQYYEA 84

Query: 114 ASLGE-----------EYITQYPESKNVDYVYYLVGMSYAQM 144
               E           ++I ++PE+      Y+ +G SY + 
Sbjct: 85  VCALELGNDDAENMLLKFIKEHPENPFTKVAYFQIGKSYYKQ 126



 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 39/127 (30%), Gaps = 15/127 (11%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +AV  L+  N   A     +  ++ P     + +        Y  G Y  A    ++ 
Sbjct: 81  YYEAVCALELGN-DDAENMLLKFIKEHPENPFTKVAYFQIGKSYYKQGNYILAIVWFDKV 139

Query: 121 I--TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
                   S N +Y  +  G +Y              K      S +  +   SPY + A
Sbjct: 140 QAGEL-SGSANTEY-KFRKGYAYFMT--------GNFKNAQLLFSEVKNK--KSPYTEDA 187

Query: 179 RFYVTVG 185
            +Y    
Sbjct: 188 IYYFAYI 194


>gi|149278745|ref|ZP_01884880.1| hypothetical protein PBAL39_06201 [Pedobacter sp. BAL39]
 gi|149230364|gb|EDM35748.1| hypothetical protein PBAL39_06201 [Pedobacter sp. BAL39]
          Length = 1005

 Score = 66.3 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 67/207 (32%), Gaps = 29/207 (14%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A    +++ + KA  YF +    +         + L  A   +    Y  A +   +
Sbjct: 518 YALAYAAFEDERYGKAASYFERFLRGNDKDTKTVNDATLRLADAYFVNKSYGNALTNYNK 577

Query: 120 YITQYPESKNV--DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
            I     +K    DY  +  GM     I+ +   Q   K  +  M  ++++Y NS Y   
Sbjct: 578 II----ANKGAGEDYALFQRGM-----IQGLEN-QNDAK--INTMQELLQQYPNSNYADD 625

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           A                E    Y  +G++  +      +++ Y  + +   A+  +    
Sbjct: 626 AG--------------FETAYTYFNKGDFDKSRSDLTGLISKYPRSSYVPRALVTIGLVQ 671

Query: 238 VALALMDEAREVVSLIQERYPQGYWAR 264
                 D A E    +   Y     A+
Sbjct: 672 YNQDQDDAALETFKKVINEYGSSEEAK 698



 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 38/235 (16%), Positives = 76/235 (32%), Gaps = 48/235 (20%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++++ ++   E           +  + +P +  A  +   +A+  ++ G + ++ S    
Sbjct: 590 LFQRGMIQGLENQNDAKINTMQELLQQYPNSNYADDAGFETAYTYFNKGDFDKSRSDLTG 649

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            I++YP S  V      +G+      +D           L+   +++  Y +S     A+
Sbjct: 650 LISKYPRSSYVPRALVTIGLVQYNQDQD--------DAALETFKKVINEYGSSE---EAK 698

Query: 180 FYVTVGRNQLAAKEVE-----------IGRY----------------YLKRGEYVA--AI 210
             +   +N    K              IG +                YLK     A  A+
Sbjct: 699 QSLESIKNIYVDKGDSQGFISYAQTTPIGDFSTAEQDNIIFQGANNRYLKGDAQGAFEAV 758

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
             +      +  A H +EA     E+ V L   DEA     +    Y    W   
Sbjct: 759 NAY---FDKFPKAIHDKEAKFIRAESLVKLGRPDEA-----IPDYEYILNDWTSD 805



 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 71/218 (32%), Gaps = 51/218 (23%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRD--------FPFAGVARKSLLMSAFVQYSAGKYQ 111
           +Y KA    + + + +A   F +            + FA  A       A+  +   +Y 
Sbjct: 478 IYWKAEASYELRKYGEAVSNFEKFLDMPGASNTEVYNFANYA------LAYAAFEDERYG 531

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           +AAS  E ++                             D +        +      + N
Sbjct: 532 KAASYFERFLR------------------------GNDKDTKTVNDA--TLRLADAYFVN 565

Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG-------EYVAAIPRFQLVLANYSDAE 224
             Y      Y  +  N+ A ++  +     +RG       +  A I   Q +L  Y ++ 
Sbjct: 566 KSYGNALTNYNKIIANKGAGEDYAL----FQRGMIQGLENQNDAKINTMQELLQQYPNSN 621

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           +A++A       Y      D++R  ++ +  +YP+  +
Sbjct: 622 YADDAGFETAYTYFNKGDFDKSRSDLTGLISKYPRSSY 659



 Score = 37.0 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 42/137 (30%), Gaps = 22/137 (16%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           ++K  L I   +A  F     + S       +          Y   +  L  + +  A +
Sbjct: 1   MHKKYLFIPLFVAGSFTASHAQSSMLVNLNKN----------YLSGLELLDNEKYVAAAQ 50

Query: 79  YFNQCS-----------RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
            F                +   + +   +   +A      G    A S  + +I +YP +
Sbjct: 51  QFRLVEQARQKASTQQESNAELSLLKENAKFYAAVCALELGN-DDAESQFQNFIREYPLN 109

Query: 128 KNVDYVYYLVGMSYAQM 144
            N    Y+ VG SY   
Sbjct: 110 ANTKLAYFHVGKSYFAQ 126


>gi|327399142|ref|YP_004340011.1| tol-pal system protein YbgF [Hippea maritima DSM 10411]
 gi|327181771|gb|AEA33952.1| tol-pal system protein YbgF [Hippea maritima DSM 10411]
          Length = 261

 Score = 65.9 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 57/139 (41%), Gaps = 8/139 (5%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
            +          V      ++KA+   K++++  A E F    +DF  + +   ++   A
Sbjct: 125 KTTTTPPKMQPRVAEDEAAFDKALALFKKKDYGSAIEAFKAFKKDFKDSKLMPDAVFYLA 184

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
              ++ G+Y +A    +  I  YP+S  +       G+++ +M   V  +          
Sbjct: 185 ESYFAKGEYDRAIINYDYLINTYPKSSKIAKATLKEGLAFIKMGDKVDGN--------YL 236

Query: 162 MSRIVERYTNSPYVKGARF 180
           + ++++++ NS   K A+ 
Sbjct: 237 LQKVIKQFPNSLEAKEAKK 255



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 28/61 (45%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            K+ +Y +AI  F+    ++ D++   +A+  L E+Y A    D A      +   YP+ 
Sbjct: 151 FKKKDYGSAIEAFKAFKKDFKDSKLMPDAVFYLAESYFAKGEYDRAIINYDYLINTYPKS 210

Query: 261 Y 261
            
Sbjct: 211 S 211



 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/141 (10%), Positives = 48/141 (34%), Gaps = 22/141 (15%)

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
           D   +   ++  +         +     ++      + + +S  +  A            
Sbjct: 140 DEAAFDKALALFKK--------KDYGSAIEAFKAFKKDFKDSKLMPDAV----------- 180

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
                +   Y  +GEY  AI  +  ++  Y  +    +A  +   A++ +    +   ++
Sbjct: 181 ---FYLAESYFAKGEYDRAIINYDYLINTYPKSSKIAKATLKEGLAFIKMGDKVDGNYLL 237

Query: 251 SLIQERYPQGYWARYVETLVK 271
             + +++P    A+  + ++K
Sbjct: 238 QKVIKQFPNSLEAKEAKKILK 258



 Score = 45.5 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/140 (13%), Positives = 42/140 (30%), Gaps = 22/140 (15%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +    A   +    Y  A    + +   + +SK +    + +  SY              
Sbjct: 142 AAFDKALALFKKKDYGSAIEAFKAFKKDFKDSKLMPDAVFYLAESYFAK--------GEY 193

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
              +     ++  Y  S  +  A     +   ++  K           G Y+      Q 
Sbjct: 194 DRAIINYDYLINTYPKSSKIAKATLKEGLAFIKMGDK---------VDGNYL-----LQK 239

Query: 216 VLANYSDAEHAEEAMARLVE 235
           V+  + ++  A+EA   L +
Sbjct: 240 VIKQFPNSLEAKEAKKILKK 259



 Score = 38.9 bits (90), Expect = 0.82,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 30/91 (32%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G   ++ +    D          V+  A  +  +  + +A   ++     +P +    K+
Sbjct: 157 GSAIEAFKAFKKDFKDSKLMPDAVFYLAESYFAKGEYDRAIINYDYLINTYPKSSKIAKA 216

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
            L         G       L ++ I Q+P S
Sbjct: 217 TLKEGLAFIKMGDKVDGNYLLQKVIKQFPNS 247


>gi|21232446|ref|NP_638363.1| hypothetical protein XCC3016 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66767471|ref|YP_242233.1| hypothetical protein XC_1143 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|188990577|ref|YP_001902587.1| Putative secreted protein [Xanthomonas campestris pv. campestris
           str. B100]
 gi|21114227|gb|AAM42287.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66572803|gb|AAY48213.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167732337|emb|CAP50529.1| Putative secreted protein [Xanthomonas campestris pv. campestris]
          Length = 272

 Score = 65.9 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 44/131 (33%), Gaps = 8/131 (6%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
            +R  Y  A   LK   +  A + F      +P       +L       Y+   +Q A +
Sbjct: 144 EERTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEA 203

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
              + +++YP           +G+S     ++            Q + ++  +Y  S   
Sbjct: 204 QFRDLVSRYPTHDKAAGGLLKLGLSQYGEGKNT--------EAQQTLQQVATQYPGSDAA 255

Query: 176 KGARFYVTVGR 186
           + A+  +   R
Sbjct: 256 RVAQERLQSIR 266



 Score = 47.0 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 41/115 (35%), Gaps = 14/115 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              Q     +E Y N  Y   A +++              G  Y     +  A  +F+ +
Sbjct: 163 DASQLFLSFLELYPNGVYTPNALYWL--------------GESYYATRNFQLAEAQFRDL 208

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           ++ Y   + A   + +L  +        EA++ +  +  +YP    AR  +  ++
Sbjct: 209 VSRYPTHDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERLQ 263



 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 23/58 (39%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           LK G+Y  A   F   L  Y +  +   A+  L E+Y A      A      +  RYP
Sbjct: 156 LKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYP 213


>gi|209523829|ref|ZP_03272382.1| serine/threonine protein kinase with TPR repeats [Arthrospira
           maxima CS-328]
 gi|209495861|gb|EDZ96163.1| serine/threonine protein kinase with TPR repeats [Arthrospira
           maxima CS-328]
          Length = 754

 Score = 65.9 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 68/206 (33%), Gaps = 32/206 (15%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L     IA   LVG          L     V+ +  + ++ V  L+  +   A + F + 
Sbjct: 333 LWTVVGIAATGLVGLIVIFGLFQVLSRPDPVKSEAAL-KRGVERLEAGDPEAAIKAFTRS 391

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
            + FP    A +     A   Y   KY+QA +   + I   P + ++   Y+   ++Y Q
Sbjct: 392 IQLFPDNSEAFR---KRANAYYDLQKYEQAIADYTQAIKLDPTNPDI---YFNRSLAYHQ 445

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
           M        R     +  +++++                   +  LA            +
Sbjct: 446 M--------RDFGNAINDLNQVIRLNPEDTDA--------FYQRGLAHY---------SQ 480

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEA 229
             Y AAI  +  V+    +   A  A
Sbjct: 481 ENYEAAILDYTEVIRRQPNNSEAYRA 506



 Score = 45.9 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 49/163 (30%), Gaps = 31/163 (19%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y++ +    ++N+  A   + +  R  P    A ++          +G  Q   +   E 
Sbjct: 471 YQRGLAHYSQENYEAAILDYTEVIRRQPNNSEAYRAR---GSAHVKSGNLQAGMADYTEA 527

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           I   PES      YY  G +   +           +  L   ++++    ++     A  
Sbjct: 528 IRLNPESAA---AYYNRGRARFHL--------GDYQGALADYNQVISWEPDN-----AEA 571

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
           Y                  Y+  G Y AAI      +     A
Sbjct: 572 YGNRCST------------YINLGNYEAAIESCSRSIQLNPTA 602



 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 23/87 (26%), Gaps = 19/87 (21%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ------Y- 105
           +       Y +        ++  A   +NQ     P           +A         Y 
Sbjct: 531 NPESAAAYYNRGRARFHLGDYQGALADYNQVISWEP----------DNAEAYGNRCSTYI 580

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDY 132
           + G Y+ A       I   P    +DY
Sbjct: 581 NLGNYEAAIESCSRSIQLNPT--AMDY 605


>gi|220904238|ref|YP_002479550.1| tol-pal system protein YbgF [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219868537|gb|ACL48872.1| tol-pal system protein YbgF [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 487

 Score = 65.9 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 48/133 (36%), Gaps = 8/133 (6%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             V  ++ ++  YE A+  +      +    F    +++P    A  +        Y+ G
Sbjct: 359 KPVRPIKGEKAAYEAALKVVMAGRPVEGISRFETFLQEYPQGTYAPNAEYWIGEGLYTQG 418

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           KY++A +   +    YP+           GM  +++           +   Q  S+++ R
Sbjct: 419 KYREALAQFRKVDASYPQHHKNADALLKTGMCLSRL--------GDKEAAGQAYSQLLAR 470

Query: 169 YTNSPYVKGARFY 181
           +  S   + AR  
Sbjct: 471 FPKSEAARLARTR 483



 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 38/107 (35%), Gaps = 14/107 (13%)

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
               ++ Y    Y   A              E  IG     +G+Y  A+ +F+ V A+Y 
Sbjct: 390 FETFLQEYPQGTYAPNA--------------EYWIGEGLYTQGKYREALAQFRKVDASYP 435

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
                 +A+ +       L   + A +  S +  R+P+   AR   T
Sbjct: 436 QHHKNADALLKTGMCLSRLGDKEAAGQAYSQLLARFPKSEAARLART 482



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 39/124 (31%), Gaps = 22/124 (17%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
            AG+  +  S  E ++ +YP+        Y +G             Q   +  L    ++
Sbjct: 379 MAGRPVEGISRFETFLQEYPQGTYAPNAEYWIGEGLYT--------QGKYREALAQFRKV 430

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
              Y        A     +  ++L  KE              AA   +  +LA +  +E 
Sbjct: 431 DASYPQHHKNADALLKTGMCLSRLGDKE--------------AAGQAYSQLLARFPKSEA 476

Query: 226 AEEA 229
           A  A
Sbjct: 477 ARLA 480


>gi|94311605|ref|YP_584815.1| TPR repeat-containing protein [Cupriavidus metallidurans CH34]
 gi|93355457|gb|ABF09546.1| conserved hypothetical protein; putative exported protein
           [Cupriavidus metallidurans CH34]
          Length = 252

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 15/132 (11%), Positives = 47/132 (35%), Gaps = 8/132 (6%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
             ++  Y+ A+   +  +F  A   F+  ++ +P +     +        Y+   Y+ + 
Sbjct: 129 PTEKPEYDAALKQFQSGDFKGAGNAFSAFAKKYPQSPYLPLAQFWLGNSLYAQRDYKGST 188

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
            + +  +  +P          ++ ++  Q        Q+A     + +  +V +Y  +  
Sbjct: 189 YVLDTMVKNFPTHPKAPDA--MIAIANNQFESG----QKAA--AKKTLEAVVAKYPGTEG 240

Query: 175 VKGARFYVTVGR 186
            + A   +   +
Sbjct: 241 AQAASNRLKTLK 252



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 39/119 (32%), Gaps = 14/119 (11%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K      S   ++Y  SPY+  A+       N L          Y +R  Y  +   
Sbjct: 145 GDFKGAGNAFSAFAKKYPQSPYLPLAQ---FWLGNSL----------YAQRD-YKGSTYV 190

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
              ++ N+     A +AM  +            A++ +  +  +YP    A+     +K
Sbjct: 191 LDTMVKNFPTHPKAPDAMIAIANNQFESGQKAAAKKTLEAVVAKYPGTEGAQAASNRLK 249


>gi|187927782|ref|YP_001898269.1| tol-pal system protein YbgF [Ralstonia pickettii 12J]
 gi|187724672|gb|ACD25837.1| tol-pal system protein YbgF [Ralstonia pickettii 12J]
          Length = 261

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 18/126 (14%), Positives = 41/126 (32%), Gaps = 8/126 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A+   +  +F  A   F+   + +P +     +        Y+   Y+ ++ + E  
Sbjct: 144 YDAALKAFQGGDFKGAGNQFSAFVKKYPQSPYLPLAQFWLGNALYAQRDYKGSSYVLENM 203

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
               P+          V              Q+A     + +  +V +Y  +   K A+ 
Sbjct: 204 ARSNPQHPKAPDALLQVA------TNQGESGQKAA--ARKTLESVVSQYPGTEQAKTAQS 255

Query: 181 YVTVGR 186
            +   R
Sbjct: 256 RLKSMR 261



 Score = 40.5 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 42/119 (35%), Gaps = 14/119 (11%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K      S  V++Y  SPY+  A+       N L          Y +R  Y  +   
Sbjct: 154 GDFKGAGNQFSAFVKKYPQSPYLPLAQ---FWLGNAL----------YAQRD-YKGSSYV 199

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
            + +  +      A +A+ ++            AR+ +  +  +YP    A+  ++ +K
Sbjct: 200 LENMARSNPQHPKAPDALLQVATNQGESGQKAAARKTLESVVSQYPGTEQAKTAQSRLK 258


>gi|262193342|ref|YP_003264551.1| hypothetical protein Hoch_0016 [Haliangium ochraceum DSM 14365]
 gi|262076689|gb|ACY12658.1| conserved hypothetical protein [Haliangium ochraceum DSM 14365]
          Length = 293

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 41/140 (29%), Gaps = 8/140 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
                    E+Y +     +  ++  A     Q    +P    A  +        Y    
Sbjct: 154 QAAKPPSPDELYSQGRAAFERGDYGGAQTLLRQLVTQYPSDTRADDAQYYRGEAYYREQD 213

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y  A    ++   +Y +S   D   +  G + AQ +R              Y   + ++Y
Sbjct: 214 YGAAIREFQKVFDKYEDSSLADDALFRAGEA-AQTLRRCS-------EARAYFGVLRQKY 265

Query: 170 TNSPYVKGARFYVTVGRNQL 189
             S  V  ++      +  L
Sbjct: 266 PRSNLVNKSKSKDQELKRDL 285



 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 14/104 (13%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
               + ++V +Y +      A+                 G  Y +  +Y AAI  FQ V 
Sbjct: 180 AQTLLRQLVTQYPSDTRADDAQ--------------YYRGEAYYREQDYGAAIREFQKVF 225

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             Y D+  A++A+ R  EA   L    EAR    +++++YP+  
Sbjct: 226 DKYEDSSLADDALFRAGEAAQTLRRCSEARAYFGVLRQKYPRSN 269



 Score = 39.3 bits (91), Expect = 0.50,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 33/101 (32%), Gaps = 12/101 (11%)

Query: 178 ARFYVTVGRNQLAAKEVEIGR------YY------LKRGEYVAAIPRFQLVLANYSDAEH 225
               + +   +LA  EV+  +       Y       +RG+Y  A    + ++  Y     
Sbjct: 137 VEERLILLEERLAKLEVQAAKPPSPDELYSQGRAAFERGDYGGAQTLLRQLVTQYPSDTR 196

Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
           A++A     EAY        A      + ++Y     A   
Sbjct: 197 ADDAQYYRGEAYYREQDYGAAIREFQKVFDKYEDSSLADDA 237


>gi|241662343|ref|YP_002980703.1| tol-pal system protein YbgF [Ralstonia pickettii 12D]
 gi|309780842|ref|ZP_07675583.1| tol-pal system protein YbgF [Ralstonia sp. 5_7_47FAA]
 gi|240864370|gb|ACS62031.1| tol-pal system protein YbgF [Ralstonia pickettii 12D]
 gi|308920524|gb|EFP66180.1| tol-pal system protein YbgF [Ralstonia sp. 5_7_47FAA]
          Length = 261

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 18/126 (14%), Positives = 41/126 (32%), Gaps = 8/126 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A+   +  +F  A   F+   + +P +     +        Y+   Y+ ++ + E  
Sbjct: 144 YDAALKAFQGGDFKGAGNQFSAFVKKYPQSPYLPLAQFWLGNALYAQRDYKGSSYVLENM 203

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
               P+          V              Q+A     + +  +V +Y  +   K A+ 
Sbjct: 204 ARSNPQHPKAPDALLQVA------TNQGESGQKAA--ARKTLESVVSQYPGTEQAKTAQS 255

Query: 181 YVTVGR 186
            +   R
Sbjct: 256 RLKSMR 261



 Score = 40.1 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 42/119 (35%), Gaps = 14/119 (11%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K      S  V++Y  SPY+  A+       N L          Y +R  Y  +   
Sbjct: 154 GDFKGAGNQFSAFVKKYPQSPYLPLAQ---FWLGNAL----------YAQRD-YKGSSYV 199

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
            + +  +      A +A+ ++            AR+ +  +  +YP    A+  ++ +K
Sbjct: 200 LENMARSNPQHPKAPDALLQVATNQGESGQKAAARKTLESVVSQYPGTEQAKTAQSRLK 258


>gi|15639360|ref|NP_218809.1| hypothetical protein TP0369 [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189025602|ref|YP_001933374.1| hypothetical protein TPASS_0369 [Treponema pallidum subsp. pallidum
           SS14]
 gi|14285869|sp|O83384|Y369_TREPA RecName: Full=Uncharacterized protein TP_0369; Flags: Precursor
 gi|3322653|gb|AAC65360.1| predicted coding region TP0369 [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189018177|gb|ACD70795.1| hypothetical protein TPASS_0369 [Treponema pallidum subsp. pallidum
           SS14]
          Length = 516

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 5/83 (6%)

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
            G  + A +   ++  Q+P  + +D  ++L G +Y     ++   QR  +L L+    I+
Sbjct: 435 QGNARDALASLGDFFAQFPSHERMDEAWFLRGQAY-----EINGAQRNVRLALEAYKTIL 489

Query: 167 ERYTNSPYVKGARFYVTVGRNQL 189
           ER+ +SPY K A       +N  
Sbjct: 490 ERFPHSPYWKKADERARFIKNFF 512


>gi|322418106|ref|YP_004197329.1| tol-pal system protein YbgF [Geobacter sp. M18]
 gi|320124493|gb|ADW12053.1| tol-pal system protein YbgF [Geobacter sp. M18]
          Length = 283

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 51/146 (34%), Gaps = 8/146 (5%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
           +G   +   +    +   ++    +Y++     K    +KA E+F       P   +A  
Sbjct: 142 LGTLEKGVAEQQKKAADLLKSPEALYQQGYDAFKAGQGAKAREFFASFLLQHPKHSLAAN 201

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +        Y+   Y+QA    +E I  YP+           GM++         +   +
Sbjct: 202 AQYWIGESYYAEKNYEQAVLEFQEVIKTYPDKDKAPAAMLKQGMAF--------RELGDS 253

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFY 181
           K     M ++VE +  S   K A+  
Sbjct: 254 KSANYIMKKLVEEHPKSEEAKIAKEK 279



 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 45/138 (32%), Gaps = 22/138 (15%)

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
               Y  G    +  +             ++ +  + ++        A+++         
Sbjct: 163 PEALYQQGYDAFKAGQGA--------KAREFFASFLLQHPKHSLAANAQYW--------- 205

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
                IG  Y     Y  A+  FQ V+  Y D + A  AM +   A+  L     A  ++
Sbjct: 206 -----IGESYYAEKNYEQAVLEFQEVIKTYPDKDKAPAAMLKQGMAFRELGDSKSANYIM 260

Query: 251 SLIQERYPQGYWARYVET 268
             + E +P+   A+  + 
Sbjct: 261 KKLVEEHPKSEEAKIAKE 278


>gi|171912815|ref|ZP_02928285.1| hypothetical protein VspiD_16585 [Verrucomicrobium spinosum DSM
           4136]
          Length = 463

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 55/161 (34%), Gaps = 6/161 (3%)

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            + +    ++ P+   A  +      V    G    A +  +  +  YP +K      + 
Sbjct: 167 VKMYEGVIKNSPYGKYAPYAQFAIGEVYQDDGDKPMANASYQAVVENYPNTKLASEAQFR 226

Query: 137 VGMSYAQMIRDVPYDQ--RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
           +G   +   R     Q   AT+  L+          +      A   +       + + +
Sbjct: 227 IGAISSAAARKTQDAQNLTATRDALETYKMAN---PSGERTSEAESLIQEVNTSQSYRSL 283

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
           EIG++Y K G+  AA   +   +  +   + A +A  RL  
Sbjct: 284 EIGKFYEKAGKPKAAAIYYNEAIK-FGAPDAAADARTRLAN 323



 Score = 50.1 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 84/256 (32%), Gaps = 48/256 (18%)

Query: 42  SSRDVYLDSVTDVRYQRE----VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
            S++  + SV++ + Q      +   A       N  +A   +      + F   A ++ 
Sbjct: 39  KSKEDAVPSVSEKQSQEAAADAMLRDARTASSTGNAGRAQSIYKDVVARYKFTDAAAEAQ 98

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
              +    + GK Q A    +++I  Y +S               Q   ++  + +A K 
Sbjct: 99  FELSRGLRATGKLQDAYEGFQKFIDNYRQSPRFSEAL--------QQQFEIAEEAKAGKK 150

Query: 158 MLQYM--------SRIVERY-------TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
               +        S +V+ Y           Y   A+                IG  Y  
Sbjct: 151 QPSLLLIPMKLDKSELVKMYEGVIKNSPYGKYAPYAQ--------------FAIGEVYQD 196

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARL-VEAYVALALMDEAR------EVVSLIQE 255
            G+   A   +Q V+ NY + + A EA  R+   +  A     +A+      + +   + 
Sbjct: 197 DGDKPMANASYQAVVENYPNTKLASEAQFRIGAISSAAARKTQDAQNLTATRDALETYKM 256

Query: 256 RYPQGYWARYVETLVK 271
             P G      E+L++
Sbjct: 257 ANPSGERTSEAESLIQ 272


>gi|238752129|ref|ZP_04613612.1| hypothetical protein yrohd0001_570 [Yersinia rohdei ATCC 43380]
 gi|238709706|gb|EEQ01941.1| hypothetical protein yrohd0001_570 [Yersinia rohdei ATCC 43380]
          Length = 269

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 48/126 (38%), Gaps = 9/126 (7%)

Query: 61  YEKAVL-FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  AV   L+++ + +A   F    + +P +     +      + Y+ GK   AA     
Sbjct: 152 YNAAVSLALEKKQYDQAITAFQSFVKQYPKSTYQPNANYWLGQLYYNKGKKDDAAYYYAV 211

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       + VG+        +  D+  +        +++++Y  +   K A+
Sbjct: 212 VVKNYPKSPKSSEAMFKVGV--------IMQDKGQSDKAKAVYQQVIKQYPTTDAAKQAQ 263

Query: 180 FYVTVG 185
             ++  
Sbjct: 264 KRLSAL 269



 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 14/129 (10%)

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           S       +  +++     +      V++Y  S Y   A +++              G+ 
Sbjct: 150 SDYNAAVSLALEKKQYDQAITAFQSFVKQYPKSTYQPNANYWL--------------GQL 195

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           Y  +G+   A   + +V+ NY  +  + EAM ++          D+A+ V   + ++YP 
Sbjct: 196 YYNKGKKDDAAYYYAVVVKNYPKSPKSSEAMFKVGVIMQDKGQSDKAKAVYQQVIKQYPT 255

Query: 260 GYWARYVET 268
              A+  + 
Sbjct: 256 TDAAKQAQK 264


>gi|21243866|ref|NP_643448.1| hypothetical protein XAC3140 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21109467|gb|AAM37984.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 272

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 44/130 (33%), Gaps = 8/130 (6%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           +R  Y  A   LK   +  A + F      +P       +L       Y+   +Q A + 
Sbjct: 145 ERTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQ 204

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
             + +++YP           +G+S     ++            Q + ++  +Y  S   +
Sbjct: 205 FRDLVSRYPTHDKAAGGLLKLGLSQYGEGKN--------NEAQQTLQQVASQYPGSDAAR 256

Query: 177 GARFYVTVGR 186
            A+  +   R
Sbjct: 257 VAQERLQSIR 266



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 42/115 (36%), Gaps = 14/115 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              Q     +E Y N  Y   A +++              G  Y     +  A  +F+ +
Sbjct: 163 DASQLFLSFLELYPNGVYTPNALYWL--------------GESYYATRNFQLAEAQFRDL 208

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           ++ Y   + A   + +L  +       +EA++ +  +  +YP    AR  +  ++
Sbjct: 209 VSRYPTHDKAAGGLLKLGLSQYGEGKNNEAQQTLQQVASQYPGSDAARVAQERLQ 263



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 23/58 (39%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           LK G+Y  A   F   L  Y +  +   A+  L E+Y A      A      +  RYP
Sbjct: 156 LKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYP 213


>gi|78048826|ref|YP_365001.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|294665413|ref|ZP_06730701.1| secreted protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
 gi|78037256|emb|CAJ25001.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|292604824|gb|EFF48187.1| secreted protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
          Length = 272

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 44/130 (33%), Gaps = 8/130 (6%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           +R  Y  A   LK   +  A + F      +P       +L       Y+   +Q A + 
Sbjct: 145 ERTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQ 204

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
             + +++YP           +G+S     ++            Q + ++  +Y  S   +
Sbjct: 205 FRDLVSRYPTHDKAAGGLLKLGLSQYGEGKN--------NEAQQTLQQVASQYPGSDAAR 256

Query: 177 GARFYVTVGR 186
            A+  +   R
Sbjct: 257 VAQERLQSIR 266



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 42/115 (36%), Gaps = 14/115 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              Q     +E Y N  Y   A +++              G  Y     +  A  +F+ +
Sbjct: 163 DASQLFLSFLELYPNGVYTPNALYWL--------------GESYYATRNFQLAEAQFRDL 208

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           ++ Y   + A   + +L  +       +EA++ +  +  +YP    AR  +  ++
Sbjct: 209 VSRYPTHDKAAGGLLKLGLSQYGEGKNNEAQQTLQQVASQYPGSDAARVAQERLQ 263



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 23/58 (39%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           LK G+Y  A   F   L  Y +  +   A+  L E+Y A      A      +  RYP
Sbjct: 156 LKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYP 213


>gi|325929355|ref|ZP_08190485.1| tol-pal system protein YbgF [Xanthomonas perforans 91-118]
 gi|325540267|gb|EGD11879.1| tol-pal system protein YbgF [Xanthomonas perforans 91-118]
          Length = 242

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 44/130 (33%), Gaps = 8/130 (6%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           +R  Y  A   LK   +  A + F      +P       +L       Y+   +Q A + 
Sbjct: 115 ERTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQ 174

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
             + +++YP           +G+S     ++            Q + ++  +Y  S   +
Sbjct: 175 FRDLVSRYPTHDKAAGGLLKLGLSQYGEGKN--------NEAQQTLQQVASQYPGSDAAR 226

Query: 177 GARFYVTVGR 186
            A+  +   R
Sbjct: 227 VAQERLQSIR 236



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 42/115 (36%), Gaps = 14/115 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              Q     +E Y N  Y   A +++              G  Y     +  A  +F+ +
Sbjct: 133 DASQLFLSFLELYPNGVYTPNALYWL--------------GESYYATRNFQLAEAQFRDL 178

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           ++ Y   + A   + +L  +       +EA++ +  +  +YP    AR  +  ++
Sbjct: 179 VSRYPTHDKAAGGLLKLGLSQYGEGKNNEAQQTLQQVASQYPGSDAARVAQERLQ 233



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 23/58 (39%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           LK G+Y  A   F   L  Y +  +   A+  L E+Y A      A      +  RYP
Sbjct: 126 LKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYP 183


>gi|294626854|ref|ZP_06705446.1| secreted protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           11122]
 gi|292598868|gb|EFF43013.1| secreted protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           11122]
          Length = 272

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 44/130 (33%), Gaps = 8/130 (6%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           +R  Y  A   LK   +  A + F      +P       +L       Y+   +Q A + 
Sbjct: 145 ERTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQ 204

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
             + +++YP           +G+S     ++            Q + ++  +Y  S   +
Sbjct: 205 FRDLVSRYPTHDKAAGGLLKLGLSQYGEGKN--------NEAQQTLQQVASQYPGSDAAR 256

Query: 177 GARFYVTVGR 186
            A+  +   R
Sbjct: 257 VAQERLQSIR 266



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 42/115 (36%), Gaps = 14/115 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              Q     +E Y N  Y   A +++              G  Y     +  A  +F+ +
Sbjct: 163 DASQLFLSFLELYPNGVYTPNALYWL--------------GESYYATRNFQLAEAQFRDL 208

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           ++ Y   + A   + +L  +       +EA++ +  +  +YP    AR  +  ++
Sbjct: 209 VSRYPTHDKAAGGLLKLGLSQYGEGKNNEAQQTLQQVASQYPGSDAARVAQERLQ 263



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 23/58 (39%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           LK G+Y  A   F   L  Y +  +   A+  L E+Y A      A      +  RYP
Sbjct: 156 LKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYP 213


>gi|304395721|ref|ZP_07377604.1| tol-pal system protein YbgF [Pantoea sp. aB]
 gi|304357015|gb|EFM21379.1| tol-pal system protein YbgF [Pantoea sp. aB]
          Length = 264

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 47/134 (35%), Gaps = 9/134 (6%)

Query: 50  SVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           +          Y  AV   L+++ + +A        + +P +     +      + Y+ G
Sbjct: 136 APAQTGDANSDYNAAVALILEKKQYDQAISALQAWVKRYPDSTYQPNANYWLGQLNYNKG 195

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           K   AA      +  YP+S         VG+        +  +++ T        ++++ 
Sbjct: 196 KKDDAAYYYATVVKNYPKSPKAAEALLKVGV--------IMQEKKDTAKAKAVFQQVIKL 247

Query: 169 YTNSPYVKGARFYV 182
           Y ++   K A+  +
Sbjct: 248 YPDTESAKQAQKRL 261



 Score = 45.9 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 45/126 (35%), Gaps = 22/126 (17%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +Y QA S  + ++ +YP+S       Y +G       +              Y + +V+
Sbjct: 158 KQYDQAISALQAWVKRYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYYATVVK 209

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y  SP    A   V V                 ++ +   A   FQ V+  Y D E A+
Sbjct: 210 NYPKSPKAAEALLKVGVIMQ--------------EKKDTAKAKAVFQQVIKLYPDTESAK 255

Query: 228 EAMARL 233
           +A  RL
Sbjct: 256 QAQKRL 261



 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             S       +  +++     +  +   V+RY +S Y   A +++               
Sbjct: 143 ANSDYNAAVALILEKKQYDQAISALQAWVKRYPDSTYQPNANYWLGQLN----------- 191

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
                +G+   A   +  V+ NY  +  A EA+ ++           +A+ V   + + Y
Sbjct: 192 ---YNKGKKDDAAYYYATVVKNYPKSPKAAEALLKVGVIMQEKKDTAKAKAVFQQVIKLY 248

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 249 PDTESAKQAQK 259



 Score = 40.9 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 2/71 (2%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           L++ +Y  AI   Q  +  Y D+ +   A   L +        D+A    + + + YP+ 
Sbjct: 155 LEKKQYDQAISALQAWVKRYPDSTYQPNANYWLGQLNYNKGKKDDAAYYYATVVKNYPKS 214

Query: 261 YWARYVETLVK 271
              +  E L+K
Sbjct: 215 --PKAAEALLK 223


>gi|78358000|ref|YP_389449.1| TPR repeat-containing protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78220405|gb|ABB39754.1| TPR repeat [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 1154

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 78/223 (34%), Gaps = 33/223 (14%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF---PFAGVARKSLLMSA 101
           D   + V       E+  +A   +   +   A E   +  R     P   +  + L + +
Sbjct: 485 DEDGNPVDPPPTSAELLFRAKAAMNNGDQQTALETLEELRRRNDLEP--ELQEEMLYLLS 542

Query: 102 FVQYSAGK------YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
            V YS GK      Y    S   E +     S+ +      +G+   ++           
Sbjct: 543 DVLYSRGKDDLLASYDTITSALTEAMNYNLSSERIPGALLRMGLINLKI--------GNI 594

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           +    Y + +   + +   +      +              G ++  +G+Y  A  +FQ 
Sbjct: 595 REAEAYFNILKREHPDDENIP-----LIY---------YYWGDHFFNKGQYQKAADQFQF 640

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           V+ N+ D+    E+   L  A   L   D+A ++V  I++R+P
Sbjct: 641 VVQNHPDSRFVRESSVGLARALYRLGYYDQAYQIVDYIEKRWP 683



 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 60/185 (32%), Gaps = 21/185 (11%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
             D       Y     F  +  + KA + F    ++ P +   R+S +  A   Y  G Y
Sbjct: 609 PDDENIPLIYYYWGDHFFNKGQYQKAADQFQFVVQNHPDSRFVRESSVGLARALYRLGYY 668

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
            QA  + +    ++P      YV Y     +  M+ DV Y  +  +    +         
Sbjct: 669 DQAYQIVDYIEKRWPRF----YVEY---PPFLNMMGDVSYRMQKYEKARIHYWTYYNIDP 721

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
           +          +              G  YL++ +  AA   ++     + D +    ++
Sbjct: 722 DGEEADLILARL--------------GDIYLRQDKTDAAREVYEEAARKFPDRDGGLISL 767

Query: 231 ARLVE 235
            RL E
Sbjct: 768 MRLAE 772



 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 76/226 (33%), Gaps = 33/226 (14%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y +    L   ++        +       +     +LL    +    G  ++A +    
Sbjct: 545 LYSRGKDDLLA-SYDTITSALTEAMNYNLSSERIPGALLRMGLINLKIGNIREAEAYFNI 603

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
              ++P+ +N+  +YY  G        D  +++   +        +V+ + +S +V+ + 
Sbjct: 604 LKREHPDDENIPLIYYYWG--------DHFFNKGQYQKAADQFQFVVQNHPDSRFVRESS 655

Query: 180 FYVTVGRNQLAAKE--VEIG--------RYY--------------LKRGEYVAAIPRFQL 215
             +     +L   +   +I         R+Y               +  +Y  A   +  
Sbjct: 656 VGLARALYRLGYYDQAYQIVDYIEKRWPRFYVEYPPFLNMMGDVSYRMQKYEKARIHYWT 715

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
                 D E A+  +ARL + Y+     D AREV      ++P   
Sbjct: 716 YYNIDPDGEEADLILARLGDIYLRQDKTDAAREVYEEAARKFPDRD 761



 Score = 38.6 bits (89), Expect = 0.91,   Method: Composition-based stats.
 Identities = 7/54 (12%), Positives = 22/54 (40%)

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
           + +   + P + +A  + +  A       +Y +A +   ++  +YP  + +   
Sbjct: 800 YLKIINEHPQSDLAPLAQVKLAMWYLWNRQYPEAMAAATDFAEKYPAGELLPRA 853


>gi|299067717|emb|CBJ38926.1| putative associated to Tol-Pal complex protein (ygcF) [Ralstonia
           solanacearum CMR15]
          Length = 257

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 17/132 (12%), Positives = 40/132 (30%), Gaps = 8/132 (6%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
             ++  Y+ A+   +  +F  A   F+   + +P +     +        Y+   Y+ + 
Sbjct: 134 PGEQTEYDAALKTFQSGDFKGAGNQFSAFVKKYPQSPYLPLAQFWLGNALYAQRDYKGST 193

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
            + E      P+          V              Q+A     + +  ++  Y  +  
Sbjct: 194 YVLENMARANPQHPKAPEALLQVA------TNQGESGQKAA--ARKTLESVIAEYPGTEQ 245

Query: 175 VKGARFYVTVGR 186
            K A   +   R
Sbjct: 246 AKTATSRLKTMR 257



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 39/119 (32%), Gaps = 14/119 (11%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K      S  V++Y  SPY+  A+       N L          Y +R  Y  +   
Sbjct: 150 GDFKGAGNQFSAFVKKYPQSPYLPLAQ---FWLGNAL----------YAQRD-YKGSTYV 195

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
            + +         A EA+ ++            AR+ +  +   YP    A+   + +K
Sbjct: 196 LENMARANPQHPKAPEALLQVATNQGESGQKAAARKTLESVIAEYPGTEQAKTATSRLK 254


>gi|317047359|ref|YP_004115007.1| tol-pal system protein YbgF [Pantoea sp. At-9b]
 gi|316948976|gb|ADU68451.1| tol-pal system protein YbgF [Pantoea sp. At-9b]
          Length = 269

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 51/144 (35%), Gaps = 9/144 (6%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           S D    + T        Y  AV   L+++ + +A        + +P +     +     
Sbjct: 134 SSDSAAAAPTQSGDANSDYNAAVALILEKKQYDQAITALQAWVKRYPDSTYQPNANYWLG 193

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
            + Y+ GK   AA      +  YP+S       + VG+        +  ++  T      
Sbjct: 194 QLFYNKGKKDDAAYYFATVVKNYPKSPKAAEALFKVGV--------IMQEKNDTAKAKAV 245

Query: 162 MSRIVERYTNSPYVKGARFYVTVG 185
             ++++++ NS   K A+  +   
Sbjct: 246 YQQVIKQFPNSESAKLAQKRLAGL 269



 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 48/131 (36%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             S       +  +++     +  +   V+RY +S Y   A +++               
Sbjct: 148 ANSDYNAAVALILEKKQYDQAITALQAWVKRYPDSTYQPNANYWLGQL------------ 195

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
            +Y K  +  AA   F  V+ NY  +  A EA+ ++           +A+ V   + +++
Sbjct: 196 -FYNKGKKDDAA-YYFATVVKNYPKSPKAAEALFKVGVIMQEKNDTAKAKAVYQQVIKQF 253

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 254 PNSESAKLAQK 264



 Score = 41.6 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 47/127 (37%), Gaps = 22/127 (17%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +Y QA +  + ++ +YP+S       Y +G  +    +              Y + +V+
Sbjct: 163 KQYDQAITALQAWVKRYPDSTYQPNANYWLGQLFYNKGKKDD--------AAYYFATVVK 214

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y  SP    A F V V                 ++ +   A   +Q V+  + ++E A+
Sbjct: 215 NYPKSPKAAEALFKVGVIMQ--------------EKNDTAKAKAVYQQVIKQFPNSESAK 260

Query: 228 EAMARLV 234
            A  RL 
Sbjct: 261 LAQKRLA 267



 Score = 39.7 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 2/71 (2%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           L++ +Y  AI   Q  +  Y D+ +   A   L + +      D+A    + + + YP+ 
Sbjct: 160 LEKKQYDQAITALQAWVKRYPDSTYQPNANYWLGQLFYNKGKKDDAAYYFATVVKNYPKS 219

Query: 261 YWARYVETLVK 271
              +  E L K
Sbjct: 220 --PKAAEALFK 228


>gi|238797728|ref|ZP_04641222.1| hypothetical protein ymoll0001_12360 [Yersinia mollaretii ATCC
           43969]
 gi|238718369|gb|EEQ10191.1| hypothetical protein ymoll0001_12360 [Yersinia mollaretii ATCC
           43969]
          Length = 257

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 49/126 (38%), Gaps = 9/126 (7%)

Query: 61  YEKAVL-FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  AV   L+++ + +A   F    + +P +     +      + Y+ GK   AA     
Sbjct: 140 YNAAVSLALEKKQYDQAITAFQGFVKQYPKSTYQPNANYWLGQLYYNKGKKDDAAYYYAV 199

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       + VG+        +  D+  +        +++++Y N+   K A+
Sbjct: 200 VVKNYPKSPKSSEAMFKVGV--------IMQDKGQSDKAKAVYQQVIKQYPNTDAAKQAQ 251

Query: 180 FYVTVG 185
             ++  
Sbjct: 252 KRLSAL 257



 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 14/129 (10%)

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           S       +  +++     +      V++Y  S Y   A +++              G+ 
Sbjct: 138 SDYNAAVSLALEKKQYDQAITAFQGFVKQYPKSTYQPNANYWL--------------GQL 183

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           Y  +G+   A   + +V+ NY  +  + EAM ++          D+A+ V   + ++YP 
Sbjct: 184 YYNKGKKDDAAYYYAVVVKNYPKSPKSSEAMFKVGVIMQDKGQSDKAKAVYQQVIKQYPN 243

Query: 260 GYWARYVET 268
              A+  + 
Sbjct: 244 TDAAKQAQK 252


>gi|238785871|ref|ZP_04629839.1| hypothetical protein yberc0001_38270 [Yersinia bercovieri ATCC
           43970]
 gi|238713241|gb|EEQ05285.1| hypothetical protein yberc0001_38270 [Yersinia bercovieri ATCC
           43970]
          Length = 260

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 49/126 (38%), Gaps = 9/126 (7%)

Query: 61  YEKAVL-FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  AV   L+++ + +A   F    + +P +     +      + Y+ GK   AA     
Sbjct: 143 YNAAVSLALEKKQYDQAITAFQGFVKQYPKSTYQPNANYWLGQLYYNKGKKDDAAYYYAV 202

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       + VG+        +  D+  +        +++++Y N+   K A+
Sbjct: 203 VVKNYPKSPKSSEAMFKVGV--------IMQDKGQSDKAKAVYQQVIKQYPNTDAAKQAQ 254

Query: 180 FYVTVG 185
             ++  
Sbjct: 255 KRLSAL 260



 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 14/129 (10%)

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           S       +  +++     +      V++Y  S Y   A +++              G+ 
Sbjct: 141 SDYNAAVSLALEKKQYDQAITAFQGFVKQYPKSTYQPNANYWL--------------GQL 186

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           Y  +G+   A   + +V+ NY  +  + EAM ++          D+A+ V   + ++YP 
Sbjct: 187 YYNKGKKDDAAYYYAVVVKNYPKSPKSSEAMFKVGVIMQDKGQSDKAKAVYQQVIKQYPN 246

Query: 260 GYWARYVET 268
              A+  + 
Sbjct: 247 TDAAKQAQK 255


>gi|91781921|ref|YP_557127.1| putative transmembrane protein [Burkholderia xenovorans LB400]
 gi|91685875|gb|ABE29075.1| Putative transmembrane protein [Burkholderia xenovorans LB400]
          Length = 249

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 50/132 (37%), Gaps = 8/132 (6%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
             + E +  A    +  +F  A   F      FP +     +        Y+   Y+ + 
Sbjct: 126 PGETESFNAASQQFRNGDFKNAAASFRTFISRFPNSPYQPTAQYWLGNALYALRDYKGST 185

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
           ++ +  +  YP+         L+ ++  Q+ +     Q+A     + + +IV +Y+ S  
Sbjct: 186 AIWQGVVKNYPQHPRAPEA--LLAIANNQLEQG----QKAA--ARKTLEQIVAQYSGSDV 237

Query: 175 VKGARFYVTVGR 186
            + A+  ++  +
Sbjct: 238 AQSAQSKLSQIK 249



 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 37/109 (33%), Gaps = 14/109 (12%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         + R+ NSPY   A++++           +   R      +Y  +   
Sbjct: 142 GDFKNAAASFRTFISRFPNSPYQPTAQYWL--------GNALYALR------DYKGSTAI 187

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +Q V+ NY     A EA+  +    +       AR+ +  I  +Y    
Sbjct: 188 WQGVVKNYPQHPRAPEALLAIANNQLEQGQKAAARKTLEQIVAQYSGSD 236



 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 52/132 (39%), Gaps = 22/132 (16%)

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           Q+  G ++ AA+    +I+++P S       Y +G +   +        R  K       
Sbjct: 138 QFRNGDFKNAAASFRTFISRFPNSPYQPTAQYWLGNALYAL--------RDYKGSTAIWQ 189

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
            +V+ Y   P    A               + I    L++G+  AA    + ++A YS +
Sbjct: 190 GVVKNYPQHPRAPEAL--------------LAIANNQLEQGQKAAARKTLEQIVAQYSGS 235

Query: 224 EHAEEAMARLVE 235
           + A+ A ++L +
Sbjct: 236 DVAQSAQSKLSQ 247


>gi|289661911|ref|ZP_06483492.1| tol-pal system protein YbgF [Xanthomonas campestris pv. vasculorum
           NCPPB702]
 gi|289667002|ref|ZP_06488077.1| tol-pal system protein YbgF [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 272

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 44/130 (33%), Gaps = 8/130 (6%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           +R  Y  A   LK   +  A + F      +P       +L       Y+   +Q A + 
Sbjct: 145 ERTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQ 204

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
             + +++YP           +G+S     ++            Q + ++  +Y  S   +
Sbjct: 205 FRDLVSRYPTHDKAAGGLLKLGLSQYGEGKN--------NEAQQTLQQVASQYPGSDAAR 256

Query: 177 GARFYVTVGR 186
            A+  +   R
Sbjct: 257 VAQERLQSIR 266



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 42/115 (36%), Gaps = 14/115 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              Q     +E Y N  Y   A +++              G  Y     +  A  +F+ +
Sbjct: 163 DASQLFLSFLELYPNGVYTPNALYWL--------------GESYYATRNFQLAEAQFRDL 208

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           ++ Y   + A   + +L  +       +EA++ +  +  +YP    AR  +  ++
Sbjct: 209 VSRYPTHDKAAGGLLKLGLSQYGEGKNNEAQQTLQQVASQYPGSDAARVAQERLQ 263



 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 23/58 (39%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           LK G+Y  A   F   L  Y +  +   A+  L E+Y A      A      +  RYP
Sbjct: 156 LKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYP 213


>gi|302343855|ref|YP_003808384.1| tol-pal system protein YbgF [Desulfarculus baarsii DSM 2075]
 gi|301640468|gb|ADK85790.1| tol-pal system protein YbgF [Desulfarculus baarsii DSM 2075]
          Length = 285

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 20/143 (13%), Positives = 52/143 (36%), Gaps = 8/143 (5%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
            +     +       +E Y  A+   ++++F  A + F +  +D P    A  +      
Sbjct: 150 EKTGPSSAAPAKLSDKERYNLALRLYEQKSFDAARDRFEELLKDKPDGAYAASAQFWVGE 209

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             YS  ++++A     + I +Y ++          G++++ +           +     +
Sbjct: 210 CYYSQKRFEEAILAYNQVIKRYAKNAKAPAAMLKQGLAFSAL--------GDKRTAKIVL 261

Query: 163 SRIVERYTNSPYVKGARFYVTVG 185
           +++V  Y  S     A+ Y+   
Sbjct: 262 NKLVNTYPKSSQAGLAKKYLAKM 284



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 41/112 (36%), Gaps = 14/112 (12%)

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
           Y+Q++          +++   +  Y   A+                +G  Y  +  +  A
Sbjct: 175 YEQKSFDAARDRFEELLKDKPDGAYAASAQ--------------FWVGECYYSQKRFEEA 220

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           I  +  V+  Y+    A  AM +   A+ AL     A+ V++ +   YP+  
Sbjct: 221 ILAYNQVIKRYAKNAKAPAAMLKQGLAFSALGDKRTAKIVLNKLVNTYPKSS 272


>gi|197119964|ref|YP_002140391.1| lipoprotein [Geobacter bemidjiensis Bem]
 gi|197089324|gb|ACH40595.1| lipoprotein, putative [Geobacter bemidjiensis Bem]
          Length = 304

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 35/73 (47%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A+ +LK + +  A E F   +  +P     RK+L M     ++   Y  A +  +E+
Sbjct: 69  YKIALSYLKGEKWGAAVEKFRTLAGRYPEEETGRKALFMVGESYFAKKDYAAALAAYQEF 128

Query: 121 ITQYPESKNVDYV 133
           I++YP+    D  
Sbjct: 129 ISRYPQETQADEA 141



 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 48/141 (34%), Gaps = 22/141 (15%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           +  G Y +A S  E  +  +P         Y + +SY +  +            ++    
Sbjct: 39  FDEGDYYRAISEYERVLYFFPAEPAAKAAQYKIALSYLKGEK--------WGAAVEKFRT 90

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +  RY      + A                 +G  Y  + +Y AA+  +Q  ++ Y    
Sbjct: 91  LAGRYPEEETGRKAL--------------FMVGESYFAKKDYAAALAAYQEFISRYPQET 136

Query: 225 HAEEAMARLVEAYVALALMDE 245
            A+EA  ++   Y+     ++
Sbjct: 137 QADEARMKMGWCYLLQGQWEQ 157



 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 48/160 (30%), Gaps = 19/160 (11%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
             AV  ++     ++      +   +  +  +         E ++ +A   + +    FP
Sbjct: 5   IAAVLLILACSVGAT----FAAPLQLTAESAL-SFGDHLFDEGDYYRAISEYERVLYFFP 59

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ---YPESKNVDYVYYLVGMSYAQMI 145
               A+ +    A       K+    +  E++ T    YPE +      ++VG SY    
Sbjct: 60  AEPAAKAAQYKIALSYLKGEKW---GAAVEKFRTLAGRYPEEETGRKALFMVGESYFAK- 115

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
                  +     L      + RY        AR  +   
Sbjct: 116 -------KDYAAALAAYQEFISRYPQETQADEARMKMGWC 148



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 43/110 (39%), Gaps = 14/110 (12%)

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
           +D+      +    R++  +   P  K A++ + +               YLK  ++ AA
Sbjct: 39  FDEGDYYRAISEYERVLYFFPAEPAAKAAQYKIALS--------------YLKGEKWGAA 84

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           + +F+ +   Y + E   +A+  + E+Y A      A         RYPQ
Sbjct: 85  VEKFRTLAGRYPEEETGRKALFMVGESYFAKKDYAAALAAYQEFISRYPQ 134



 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 6/66 (9%), Positives = 27/66 (40%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
             +   ++ ++     +  +++++ A   + +    +P    A ++ +   +     G++
Sbjct: 96  PEEETGRKALFMVGESYFAKKDYAAALAAYQEFISRYPQETQADEARMKMGWCYLLQGQW 155

Query: 111 QQAASL 116
           +Q A  
Sbjct: 156 EQGAGA 161


>gi|283780651|ref|YP_003371406.1| hypothetical protein Psta_2881 [Pirellula staleyi DSM 6068]
 gi|283439104|gb|ADB17546.1| Tetratricopeptide TPR_2 repeat protein [Pirellula staleyi DSM 6068]
          Length = 1076

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/257 (11%), Positives = 80/257 (31%), Gaps = 31/257 (12%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            +F    +         +               R+ +  A  F     F  A + +    
Sbjct: 11  VVFLLAGMLAGGALSFTTVAQAQEKPAESPPAARQKFVDAGNFQNNGAFDLAVDEWQAFL 70

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
           + +P   +A K+            K ++A +  E+ +  YP+ + ++ +   +G     +
Sbjct: 71  KAYPTDPLAGKARYYLGVCLLQQKKPEEALAAFEKVLADYPKFEQMEDLLVNLGSCQYSL 130

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
            +                +++ + +  S +V+ +                    +Y    
Sbjct: 131 GQAGK--AEMFGKAATSYAKLAKDFPKSKFVEESL-------------------FYQGES 169

Query: 205 EYVA-----AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            Y A     ++  ++ ++ ++  +   EE +  L      L   + A      + + +P+
Sbjct: 170 LYSAGKKGESLAPYEQLIKDFPKSTRREETLYALGCTQEELGKYEPALATFETLLKEFPE 229

Query: 260 GYWA-----RYVETLVK 271
              A     R  E L++
Sbjct: 230 SKLATEVTMRKAEALLQ 246



 Score = 52.8 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 60/221 (27%), Gaps = 37/221 (16%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
           S+      G        +  D     R +  +Y       +   +  A   F    ++FP
Sbjct: 169 SLYSAGKKGESLAPYEQLIKDFPKSTRREETLYALGCTQEELGKYEPALATFETLLKEFP 228

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQA------ASLGEEYITQYPESKNVDYVYYLVGMSYA 142
            + +A +  +  A      G    A       +  + +          DY     G + A
Sbjct: 229 ESKLATEVTMRKAEALLQKGDLAAAEKLFGEVAAVKGF-------SQADYALLRQGTALA 281

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
           +  +               + ++V  + +S YV  A               +   RY+ +
Sbjct: 282 KQEKFP--------EAAAVLVKLVTDFGSSAYVADAT--------------LGAARYFYR 319

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
                 A    + V+        A EA   L   Y+     
Sbjct: 320 ANNDAEAETWLKKVVEA--KTPAAAEAAHWLARLYIKTGKP 358



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/230 (11%), Positives = 68/230 (29%), Gaps = 24/230 (10%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
            + + + +  D  +     +  Y    +     +F+ +   ++     +P +  A  +L 
Sbjct: 584 AKSTLQKLMTDFASSTVLDQAHYRMGEILYAANDFAGSATEYSVVVTKYPESPFAPYALY 643

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
              +    + ++ +A       I ++   + V    Y   ++                  
Sbjct: 644 GQGWSLLKSKEFAKAVESFTSVIDKHASHELVADSQYGRAVA--------RRQAGDAAGS 695

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQ-LAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
           L      +++                   + LA     +        +Y  A+  F  +L
Sbjct: 696 LADFDAYLKK----ELTPD--QKCDALYERGLAQ----VA-----IMKYADAVASFDELL 740

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
              +    A++ +  L  A  +L    EA  +   I + YP+   A    
Sbjct: 741 KVNAKYSAADKVLYELAWAQKSLDKHAEAVPLFEKIAKDYPESPLAAEAW 790



 Score = 45.9 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/203 (10%), Positives = 56/203 (27%), Gaps = 21/203 (10%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
             +  D           +       +++ +  A + + +     P   +   +     + 
Sbjct: 774 EKIAKDYPESPLAAEAWFRVGEDQYEKKTYDVAVKSYTEAMGKKPAGELGEMTSYKLGWA 833

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
            +   +YQ A       +  +P         ++      +M      D            
Sbjct: 834 NFQLKQYQPALDSFSSQVKDHPAGPLSADGIFMKAECLFRMENY--KDAYPAYEAAS--- 888

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
                   + +       +T+     +A ++          ++  A+     + A ++D+
Sbjct: 889 -------KTKFSSPTYEMLTLLHGGQSAAQLS---------KWDDALKLLSQIPAKFADS 932

Query: 224 EHAEEAMARLVEAYVALALMDEA 246
               EA   +  A   L  +DEA
Sbjct: 933 PLLPEATYEIGWAKQNLGKLDEA 955



 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 68/199 (34%), Gaps = 24/199 (12%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC-SRDFPFAGVARKSLLMSAFVQYSA 107
             +T  +    +YE+ +  +    ++ A   F++    +  ++  A K L   A+ Q S 
Sbjct: 705 KELTPDQKCDALYERGLAQVAIMKYADAVASFDELLKVNAKYSA-ADKVLYELAWAQKSL 763

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            K+ +A  L E+    YPES      ++ VG    +         +   + ++  +  + 
Sbjct: 764 DKHAEAVPLFEKIAKDYPESPLAAEAWFRVGEDQYEK--------KTYDVAVKSYTEAMG 815

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
           +       +   + +     QL               +Y  A+  F   + ++     + 
Sbjct: 816 KKPAGELGEMTSYKLGWANFQL--------------KQYQPALDSFSSQVKDHPAGPLSA 861

Query: 228 EAMARLVEAYVALALMDEA 246
           + +    E    +    +A
Sbjct: 862 DGIFMKAECLFRMENYKDA 880



 Score = 38.9 bits (90), Expect = 0.78,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 78/255 (30%), Gaps = 59/255 (23%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D  +  +    +Y  A   L  + F +A ++     + +  A +   +  ++A      G
Sbjct: 409 DHASHEQAPLALYSAAFTALDLKKFDEALKHAADFEKAYATAPLLPDTKYVAAEANLQLG 468

Query: 109 KYQQAASLG----EEY----------ITQ---------Y--------PE------SKNVD 131
           K  +A +      E++          I           Y        P+       + V 
Sbjct: 469 KLPEAEAAYRELVEKFASHAEADTWKIRLARTLLLEKKYDDLVTTVTPQITTLKKHELVA 528

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
             ++LVG +     +         K     ++  +                         
Sbjct: 529 EAHFLVGSAQFFADK--------FKEAETSLNASLAADPKWRQADETM------------ 568

Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
             + + R   K  +  AA    Q ++ +++ +   ++A  R+ E   A      +    S
Sbjct: 569 --LLVARTQRKLDQVDAAKSTLQKLMTDFASSTVLDQAHYRMGEILYAANDFAGSATEYS 626

Query: 252 LIQERYPQGYWARYV 266
           ++  +YP+  +A Y 
Sbjct: 627 VVVTKYPESPFAPYA 641


>gi|17545456|ref|NP_518858.1| hypothetical protein RSc0737 [Ralstonia solanacearum GMI1000]
 gi|17427748|emb|CAD14267.1| probable transmembrane protein [Ralstonia solanacearum GMI1000]
          Length = 274

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 17/132 (12%), Positives = 40/132 (30%), Gaps = 8/132 (6%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
             ++  Y+ A+   +  +F  A   F+   + +P +     +        Y+   Y+ + 
Sbjct: 151 PGEKTEYDAALKTFQSGDFKGAGNQFSAFVKKYPQSPYLPLAQFWLGNALYAQRDYKGST 210

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
            + E      P+          V              Q+A     + +  ++  Y  +  
Sbjct: 211 YVLENMARANPQHPKAPEALLQVA------TNQGESGQKAA--ARKTLETVIAEYPGTEQ 262

Query: 175 VKGARFYVTVGR 186
            K A   +   R
Sbjct: 263 AKTATSRLKTMR 274



 Score = 42.4 bits (99), Expect = 0.074,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 39/119 (32%), Gaps = 14/119 (11%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K      S  V++Y  SPY+  A+       N L          Y +R  Y  +   
Sbjct: 167 GDFKGAGNQFSAFVKKYPQSPYLPLAQ---FWLGNAL----------YAQRD-YKGSTYV 212

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
            + +         A EA+ ++            AR+ +  +   YP    A+   + +K
Sbjct: 213 LENMARANPQHPKAPEALLQVATNQGESGQKAAARKTLETVIAEYPGTEQAKTATSRLK 271



 Score = 42.0 bits (98), Expect = 0.088,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 54/140 (38%), Gaps = 22/140 (15%)

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
            K+   +A   + +G ++ A +    ++ +YP+S  +    + +G +          D +
Sbjct: 153 EKTEYDAALKTFQSGDFKGAGNQFSAFVKKYPQSPYLPLAQFWLGNALYAQ-----RDYK 207

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
            +  +L+ M+R        P    A               +++     + G+  AA    
Sbjct: 208 GSTYVLENMARAN---PQHPKAPEAL--------------LQVATNQGESGQKAAARKTL 250

Query: 214 QLVLANYSDAEHAEEAMARL 233
           + V+A Y   E A+ A +RL
Sbjct: 251 ETVIAEYPGTEQAKTATSRL 270


>gi|222054652|ref|YP_002537014.1| tol-pal system protein YbgF [Geobacter sp. FRC-32]
 gi|221563941|gb|ACM19913.1| tol-pal system protein YbgF [Geobacter sp. FRC-32]
          Length = 241

 Score = 64.8 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 46/141 (32%), Gaps = 8/141 (5%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           +    +       ++ Y KA       N++ A + F    + +P +     ++       
Sbjct: 107 NREPSAAEGDSAHQDTYVKAFGLFSANNYNAAIDAFEAFMKAYPDSEYVGNAMYWVGECY 166

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y+   Y +A     + I+ +P+   V      VG +   M               + +  
Sbjct: 167 YTQHNYNEALESFSKVISTFPDGNKVPDAMLKVGYTLISMNEPA--------KAKESLQA 218

Query: 165 IVERYTNSPYVKGARFYVTVG 185
           +V+++  S     AR  +   
Sbjct: 219 LVDKFPKSQAAAKAREKLVRL 239



 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 47/116 (40%), Gaps = 15/116 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             +      ++ Y +S YV  A ++V                 Y  +  Y  A+  F  V
Sbjct: 137 AAIDAFEAFMKAYPDSEYVGNAMYWVGEC--------------YYTQHNYNEALESFSKV 182

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV-ETLVK 271
           ++ + D     +AM ++    +++    +A+E +  + +++P+   A    E LV+
Sbjct: 183 ISTFPDGNKVPDAMLKVGYTLISMNEPAKAKESLQALVDKFPKSQAAAKAREKLVR 238



 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 2/68 (2%)

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
             Y AAI  F+  +  Y D+E+   AM  + E Y      +EA E  S +   +P G   
Sbjct: 133 NNYNAAIDAFEAFMKAYPDSEYVGNAMYWVGECYYTQHNYNEALESFSKVISTFPDGN-- 190

Query: 264 RYVETLVK 271
           +  + ++K
Sbjct: 191 KVPDAMLK 198


>gi|271499766|ref|YP_003332791.1| tol-pal system protein YbgF [Dickeya dadantii Ech586]
 gi|270343321|gb|ACZ76086.1| tol-pal system protein YbgF [Dickeya dadantii Ech586]
          Length = 270

 Score = 64.8 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 46/126 (36%), Gaps = 9/126 (7%)

Query: 61  YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A    L+++ + +A   F    + +P +     +      + Y+ GK   +A     
Sbjct: 153 YNAAASLVLEKKQYDQAIAAFQNFVKRYPDSTYQPNANYWLGQLFYNKGKKDDSAYYFAN 212

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       + VG+        +  ++  T        ++++ Y N+   K A+
Sbjct: 213 VVKNYPKSPKAPEAMFKVGL--------IMQEKGQTDKAKAVYQQVIKNYPNTDGAKQAQ 264

Query: 180 FYVTVG 185
             +   
Sbjct: 265 KRLDSL 270



 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 47/131 (35%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  +++     +      V+RY +S Y   A +++               
Sbjct: 149 ANTDYNAAASLVLEKKQYDQAIAAFQNFVKRYPDSTYQPNANYWLGQL------------ 196

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
            +Y K  +  +A   F  V+ NY  +  A EAM ++          D+A+ V   + + Y
Sbjct: 197 -FYNKGKKDDSA-YYFANVVKNYPKSPKAPEAMFKVGLIMQEKGQTDKAKAVYQQVIKNY 254

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 255 PNTDGAKQAQK 265


>gi|238793899|ref|ZP_04637519.1| hypothetical protein yinte0001_25140 [Yersinia intermedia ATCC
           29909]
 gi|238726802|gb|EEQ18336.1| hypothetical protein yinte0001_25140 [Yersinia intermedia ATCC
           29909]
          Length = 260

 Score = 64.8 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 52/156 (33%), Gaps = 9/156 (5%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVL-FLKEQNFSKAYEYFNQCSRDFPF 89
           +           +             +   Y  AV   L+++ F +A   F    + +P 
Sbjct: 113 SAAGSSDTAAAGAAAATAAPAASTGDENSDYNAAVSLALEKKQFDQAITAFQGFVKQYPK 172

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +     +      + Y+ GK   AA      +  YP+S       + VG+        + 
Sbjct: 173 STYQPNANYWLGQLYYNKGKKDDAAYYYAVVVKNYPKSPKSSEAMFKVGV--------IM 224

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            D+  +        +++++Y N+   K A+  ++  
Sbjct: 225 QDKGQSDKAKAVYQQVIKQYPNTDAAKQAQKRLSAL 260



 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 14/129 (10%)

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           S       +  +++     +      V++Y  S Y   A +++              G+ 
Sbjct: 141 SDYNAAVSLALEKKQFDQAITAFQGFVKQYPKSTYQPNANYWL--------------GQL 186

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           Y  +G+   A   + +V+ NY  +  + EAM ++          D+A+ V   + ++YP 
Sbjct: 187 YYNKGKKDDAAYYYAVVVKNYPKSPKSSEAMFKVGVIMQDKGQSDKAKAVYQQVIKQYPN 246

Query: 260 GYWARYVET 268
              A+  + 
Sbjct: 247 TDAAKQAQK 255


>gi|300692235|ref|YP_003753230.1| associated to Tol-Pal complex protein (ygcF) [Ralstonia
           solanacearum PSI07]
 gi|299079295|emb|CBJ51967.1| putative associated to Tol-Pal complex protein (ygcF) [Ralstonia
           solanacearum PSI07]
          Length = 274

 Score = 64.8 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 17/132 (12%), Positives = 40/132 (30%), Gaps = 8/132 (6%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
             ++  Y+ A+   +  +F  A   F+   + +P +     +        Y+   Y+ + 
Sbjct: 151 PGEKTEYDAALKTFQSGDFKGAGNQFSAFVKKYPQSPYLPLAQFWLGNALYAQRDYKGST 210

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
            + E      P+          +              Q+A     + +  +V  Y  +  
Sbjct: 211 YVLENMARANPQHPKAPEALLQIA------TNQGESGQKAA--ARKTLEAVVAEYPGTEQ 262

Query: 175 VKGARFYVTVGR 186
            K A   +   R
Sbjct: 263 AKTASSRLKTMR 274



 Score = 43.2 bits (101), Expect = 0.038,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 39/119 (32%), Gaps = 14/119 (11%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K      S  V++Y  SPY+  A+       N L          Y +R  Y  +   
Sbjct: 167 GDFKGAGNQFSAFVKKYPQSPYLPLAQ---FWLGNAL----------YAQRD-YKGSTYV 212

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
            + +         A EA+ ++            AR+ +  +   YP    A+   + +K
Sbjct: 213 LENMARANPQHPKAPEALLQIATNQGESGQKAAARKTLEAVVAEYPGTEQAKTASSRLK 271



 Score = 40.9 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 54/140 (38%), Gaps = 22/140 (15%)

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
            K+   +A   + +G ++ A +    ++ +YP+S  +    + +G +          D +
Sbjct: 153 EKTEYDAALKTFQSGDFKGAGNQFSAFVKKYPQSPYLPLAQFWLGNALYAQ-----RDYK 207

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
            +  +L+ M+R        P    A               ++I     + G+  AA    
Sbjct: 208 GSTYVLENMARAN---PQHPKAPEAL--------------LQIATNQGESGQKAAARKTL 250

Query: 214 QLVLANYSDAEHAEEAMARL 233
           + V+A Y   E A+ A +RL
Sbjct: 251 EAVVAEYPGTEQAKTASSRL 270


>gi|310819959|ref|YP_003952317.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309393031|gb|ADO70490.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1]
          Length = 1109

 Score = 64.8 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 71/224 (31%), Gaps = 35/224 (15%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           ++ A   L    + +A + +     + P    A K+L  +A    +  ++  A  L E  
Sbjct: 687 FKLADQLLAAGQYDEAAKKYLLLVEEAPRHEFADKALNNAAIAYENTRRFDSALKLYERI 746

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-- 178
             +YP SK  D   + V +      +   +D       +    ++V+ Y  S   + A  
Sbjct: 747 YREYPNSKLADAALFRVAV---NAEKSYDFD-----KAVVNYQKLVKDYPTSQEREAALY 798

Query: 179 -RFYVTVGRN----------QLAA----------KEVEIGRYYLKRGEYVAAIPRFQLVL 217
               +   +            LA            +      Y K  ++   I      +
Sbjct: 799 NAARLMEAQQRYPEAAKAFVHLAEQYPKAEDAPKHQYRAALIYEKNQDWWRTIRELNTFV 858

Query: 218 ANYSDAEH----AEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           + ++          EA  R+ +A++ L     A    ++    +
Sbjct: 859 SAFAKKPAQGELVVEAKKRIGDAFLKLNDERNAERAWTVAASEF 902



 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 52/164 (31%), Gaps = 29/164 (17%)

Query: 105 YSAGKYQQAASLGEEYITQY-------PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
           +       AA   +E   +Y       P  +  D       ++Y           R    
Sbjct: 687 FKLADQLLAAGQYDEAAKKYLLLVEEAPRHEFADKALNNAAIAYENT--------RRFDS 738

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
            L+   RI   Y NS     A F V    N  A K  +          +  A+  +Q ++
Sbjct: 739 ALKLYERIYREYPNSKLADAALFRV--AVN--AEKSYD----------FDKAVVNYQKLV 784

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            +Y  ++  E A+        A     EA +    + E+YP+  
Sbjct: 785 KDYPTSQEREAALYNAARLMEAQQRYPEAAKAFVHLAEQYPKAE 828



 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 30/79 (37%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           + +  D  T    +  +Y  A L   +Q + +A + F   +  +P A  A K    +A +
Sbjct: 781 QKLVKDYPTSQEREAALYNAARLMEAQQRYPEAAKAFVHLAEQYPKAEDAPKHQYRAALI 840

Query: 104 QYSAGKYQQAASLGEEYIT 122
                 + +       +++
Sbjct: 841 YEKNQDWWRTIRELNTFVS 859



 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 51/137 (37%), Gaps = 4/137 (2%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
           +Y +          ++  AV   K  +F KA   + +  +D+P +     +L  +A +  
Sbjct: 746 IYREYPNSKLADAALFRVAVNAEKSYDFDKAVVNYQKLVKDYPTSQEREAALYNAARLME 805

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
           +  +Y +AA        QYP++++     Y   + Y +  +D     R     +   ++ 
Sbjct: 806 AQQRYPEAAKAFVHLAEQYPKAEDAPKHQYRAALIY-EKNQDWWRTIRELNTFVSAFAKK 864

Query: 166 VERYTNSPYVKGARFYV 182
                    V  A+  +
Sbjct: 865 PA---QGELVVEAKKRI 878



 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 59/181 (32%), Gaps = 25/181 (13%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           NF  +   + +  ++FP   +   +  +  +      ++ ++ +  ++ I +YP+S+   
Sbjct: 165 NFGLSIALYQRLIQEFPDYRLNDGAWYLLGYCLEKQNQFDESHATYQQLIARYPKSRFAI 224

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
             +  +G  Y     D                    R  + P    A + +         
Sbjct: 225 EAWVRIGEHYFDSYSD-----AEALAKAAQAYEAATRDPSHPLYDKALYKLGWA------ 273

Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
                   Y +   +  ++ RF  +   Y   +        L E +    L +EA + V+
Sbjct: 274 --------YYRMDRFDESVDRFLDLADFYETQKQT------LGEGFGGGDLREEALQYVA 319

Query: 252 L 252
           +
Sbjct: 320 I 320


>gi|91787862|ref|YP_548814.1| hypothetical protein Bpro_1986 [Polaromonas sp. JS666]
 gi|91697087|gb|ABE43916.1| Tetratricopeptide TPR_2 [Polaromonas sp. JS666]
          Length = 253

 Score = 64.8 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 49/141 (34%), Gaps = 8/141 (5%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
           V          +++ +E A+  L++ +F+ A   F    + +P +G    +L      QY
Sbjct: 121 VDGKEFVAEPAEKQEFEAALATLRKGDFAAAQTSFVAFMKRYPQSGYTSSALFWLGNAQY 180

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
           +   Y+ A +     +T  P           +     ++        +  K   + +  +
Sbjct: 181 ALRNYRDAVANFRTLVTLEPGHMRAPEALLSMANCQVEL--------KDVKSARKTLEDL 232

Query: 166 VERYTNSPYVKGARFYVTVGR 186
           V+ Y  S     A+  +   +
Sbjct: 233 VKAYPQSEAASVAKERLVRLK 253



 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 44/143 (30%), Gaps = 22/143 (15%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           A K    +A      G +  A +    ++ +YP+S       + +G +   +        
Sbjct: 131 AEKQEFEAALATLRKGDFAAAQTSFVAFMKRYPQSGYTSSALFWLGNAQYAL-------- 182

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           R  +  +     +V           A   +   + +L               +  +A   
Sbjct: 183 RNYRDAVANFRTLVTLEPGHMRAPEALLSMANCQVEL--------------KDVKSARKT 228

Query: 213 FQLVLANYSDAEHAEEAMARLVE 235
            + ++  Y  +E A  A  RLV 
Sbjct: 229 LEDLVKAYPQSEAASVAKERLVR 251



 Score = 42.8 bits (100), Expect = 0.055,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 36/105 (34%), Gaps = 14/105 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                    ++RY  S Y   A F++   +  L                Y  A+  F+ +
Sbjct: 150 AAQTSFVAFMKRYPQSGYTSSALFWLGNAQYAL--------------RNYRDAVANFRTL 195

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +        A EA+  +    V L  +  AR+ +  + + YPQ  
Sbjct: 196 VTLEPGHMRAPEALLSMANCQVELKDVKSARKTLEDLVKAYPQSE 240


>gi|296162178|ref|ZP_06844974.1| tol-pal system protein YbgF [Burkholderia sp. Ch1-1]
 gi|295887564|gb|EFG67386.1| tol-pal system protein YbgF [Burkholderia sp. Ch1-1]
          Length = 249

 Score = 64.8 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 48/132 (36%), Gaps = 8/132 (6%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
             + E +  A    +  +F  A   F      FP +     +        Y+   Y+ + 
Sbjct: 126 PGETESFNAASQQFRNGDFKNAAASFRTFISKFPNSPYQPTAQYWLGNALYALRDYKGST 185

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
           +  +  +  YP+         L+ ++  Q+ +     Q+A     + + +IV +Y  S  
Sbjct: 186 ATWQGVVKNYPQHPRAPEA--LLAIANNQLEQG----QKAA--ARKTLEQIVAQYGGSDV 237

Query: 175 VKGARFYVTVGR 186
            + A+  ++  +
Sbjct: 238 AQSAQSKLSQIK 249



 Score = 52.0 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 37/109 (33%), Gaps = 14/109 (12%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         + ++ NSPY   A++++           +   R      +Y  +   
Sbjct: 142 GDFKNAAASFRTFISKFPNSPYQPTAQYWL--------GNALYALR------DYKGSTAT 187

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +Q V+ NY     A EA+  +    +       AR+ +  I  +Y    
Sbjct: 188 WQGVVKNYPQHPRAPEALLAIANNQLEQGQKAAARKTLEQIVAQYGGSD 236



 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 51/132 (38%), Gaps = 22/132 (16%)

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           Q+  G ++ AA+    +I+++P S       Y +G +   +        R  K       
Sbjct: 138 QFRNGDFKNAAASFRTFISKFPNSPYQPTAQYWLGNALYAL--------RDYKGSTATWQ 189

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
            +V+ Y   P    A               + I    L++G+  AA    + ++A Y  +
Sbjct: 190 GVVKNYPQHPRAPEAL--------------LAIANNQLEQGQKAAARKTLEQIVAQYGGS 235

Query: 224 EHAEEAMARLVE 235
           + A+ A ++L +
Sbjct: 236 DVAQSAQSKLSQ 247



 Score = 35.5 bits (81), Expect = 7.6,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 24/59 (40%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            + G++  A   F+  ++ + ++ +   A   L  A  AL     +      + + YPQ
Sbjct: 139 FRNGDFKNAAASFRTFISKFPNSPYQPTAQYWLGNALYALRDYKGSTATWQGVVKNYPQ 197


>gi|194337184|ref|YP_002018978.1| tol-pal system protein YbgF [Pelodictyon phaeoclathratiforme BU-1]
 gi|194309661|gb|ACF44361.1| tol-pal system protein YbgF [Pelodictyon phaeoclathratiforme BU-1]
          Length = 262

 Score = 64.8 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 48/143 (33%), Gaps = 8/143 (5%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
           Q +  V             + E+    LK +N+  + E F    +  P + +A ++    
Sbjct: 128 QQNDTVQSAQKPSALTDAALLEEGRERLKSKNYVASRESFGLLMQRTPPSALADQAQFFI 187

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           A   +    Y++A    +  I +Y +S       Y   +S  + I D             
Sbjct: 188 AESYFGEKWYEKAILEYQVVIAKYLKSNKRPEALYKQALS-FEFIGDPA-------NAKA 239

Query: 161 YMSRIVERYTNSPYVKGARFYVT 183
               +V  Y ++P    AR  + 
Sbjct: 240 RFKDLVNVYPDAPQATQARKKLQ 262



 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 33/103 (32%), Gaps = 14/103 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              +    +++R   S     A+                I   Y     Y  AI  +Q+V
Sbjct: 162 ASRESFGLLMQRTPPSALADQAQ--------------FFIAESYFGEKWYEKAILEYQVV 207

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           +A Y  +    EA+ +   ++  +     A+     +   YP 
Sbjct: 208 IAKYLKSNKRPEALYKQALSFEFIGDPANAKARFKDLVNVYPD 250


>gi|120436880|ref|YP_862566.1| hypothetical protein GFO_2543 [Gramella forsetii KT0803]
 gi|117579030|emb|CAL67499.1| conserved hypothetical protein, secreted [Gramella forsetii KT0803]
          Length = 1006

 Score = 64.8 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/211 (18%), Positives = 70/211 (33%), Gaps = 33/211 (15%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-----KSLLMSAFVQYSAGKYQQAAS 115
           Y     + K+ ++S+A  YF      +  +  A       +LL      Y   +Y  A  
Sbjct: 505 YNIGYAYFKKNDYSQAVNYFKS----YASSSNAEGAKKNDALLRLGDTYYVTSQYWPAME 560

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
             +  I       N DY  +   +SY  + R+           ++ ++    +Y  SPY 
Sbjct: 561 AYQNAINN--GVSNADYAAFQKAISYGFVNRNDTK--------IEELNSFTGKYPRSPYR 610

Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
                         A  E+  G  Y+       AI  +  ++ +   +    +AM R   
Sbjct: 611 DD------------AMYEL--GNTYVASNNTTQAIQSYNRLIRDVPQSALVPKAMLRQGL 656

Query: 236 AYVALALMDEAREVVSLIQERYPQGYWARYV 266
            Y      ++A E +  +   YP    A+  
Sbjct: 657 IYYNNNDGNKALERLRKVVADYPNTPEAKQA 687



 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 75/213 (35%), Gaps = 46/213 (21%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
              +YE    ++   N ++A + +N+  RD P + +  K++L    + Y+     +A   
Sbjct: 611 DDAMYELGNTYVASNNTTQAIQSYNRLIRDVPQSALVPKAMLRQGLIYYNNNDGNKALER 670

Query: 117 GEEYITQYPESKNV------------------DYVYYLVGMSYAQMIRDVPYDQRATK-- 156
             + +  YP +                     +Y  ++  + + + + D   D    +  
Sbjct: 671 LRKVVADYPNTPEAKQAVSTARNVYVDLGRTDEYASWVRNIDFVE-VSDADLDNTTYEAA 729

Query: 157 ----------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
                       +    + ++ + N  +   A                 + + Y + G  
Sbjct: 730 ENQYLNNNSAKAIANFEKYIQNFPNGIHSINAN--------------FYLAQLYYRDGNV 775

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             +IP ++ V +     E +E+A+ARL + Y+ 
Sbjct: 776 EKSIPNYRYVTSK-PKNEFSEQALARLSQIYLE 807



 Score = 39.7 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 72/213 (33%), Gaps = 24/213 (11%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           R++    V+D       YE A       N +KA   F +  ++FP    +  +    A +
Sbjct: 709 RNIDFVEVSDADLDNTTYEAAENQYLNNNSAKAIANFEKYIQNFPNGIHSINANFYLAQL 768

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
            Y  G  +++      Y+T  P+++  +             +  +  +++     L  + 
Sbjct: 769 YYRDGNVEKSIPNY-RYVTSKPKNEFSEQAL--------ARLSQIYLEKKDYTHALPLLE 819

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN-YSD 222
           ++ ++             V   +  L          Y + G +  A      VL N  ++
Sbjct: 820 KLEKQ-------ADNEQNVVFAQQNLMKS-------YFETGNFGKANEYADKVLNNSTAE 865

Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
            E   +A   +  A V      +AR     +Q+
Sbjct: 866 TEARNDARIMVARAAVKSGNDTKARSAYKEVQK 898



 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 58/196 (29%), Gaps = 34/196 (17%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
              +     + +A  Y       +                +  Y  G Y+ A S   + +
Sbjct: 251 GESYFNLGKYEEAIPYLKG----YNGMRGKWNNTDYYQLGYAYYKQGNYEAAISEFNKIV 306

Query: 122 TQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
                   +    YY +  SY +       DQ+  +  L            S     A+ 
Sbjct: 307 D---GKNAIAQNAYYHLAQSYLES------DQK--QQALNAFKN------ASEMEFDAKI 349

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
                 N  A    EIG        Y +        L  Y ++E  +E  + L+++++  
Sbjct: 350 QQDALLNY-AKLSYEIG------NSYESPSQVLINYLNKYPESEKRQEMESLLIDSFITS 402

Query: 241 ALMDEAREVVSLIQER 256
              +EA   + L++  
Sbjct: 403 KNYEEA---MRLLENN 415


>gi|121604949|ref|YP_982278.1| hypothetical protein Pnap_2048 [Polaromonas naphthalenivorans CJ2]
 gi|120593918|gb|ABM37357.1| Tetratricopeptide TPR_2 repeat protein [Polaromonas
           naphthalenivorans CJ2]
          Length = 253

 Score = 64.8 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 52/151 (34%), Gaps = 20/151 (13%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           S   V          +++ +E A+  L++  F+ A   F   ++ +P +G    +L   A
Sbjct: 117 SKVSVDGREFAAEPAEKQEFEAALASLRKGEFAAAQTSFTAFTKRYPQSGYKSSALFWLA 176

Query: 102 FVQYSAGKYQQA------ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
             QY+   Y+ A       +  +      PE          +     ++        +  
Sbjct: 177 NAQYALRDYKSAVNNFRTVASAD------PEHVRAPEALLSMANCQVEL--------KDA 222

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
           K   + +  +V+ Y  S     A+  ++  +
Sbjct: 223 KSARKTLEELVKTYPQSEAASVAKERLSKLK 253



 Score = 49.3 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 38/105 (36%), Gaps = 14/105 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                 +   +RY  S Y   A F++   +  L               +Y +A+  F+ V
Sbjct: 150 AAQTSFTAFTKRYPQSGYKSSALFWLANAQYAL--------------RDYKSAVNNFRTV 195

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            +   +   A EA+  +    V L     AR+ +  + + YPQ  
Sbjct: 196 ASADPEHVRAPEALLSMANCQVELKDAKSARKTLEELVKTYPQSE 240



 Score = 40.9 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/143 (13%), Positives = 42/143 (29%), Gaps = 22/143 (15%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           A K    +A      G++  A +    +  +YP+S       + +  +   +        
Sbjct: 131 AEKQEFEAALASLRKGEFAAAQTSFTAFTKRYPQSGYKSSALFWLANAQYAL-------- 182

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           R  K  +     +            A   +   + +L               +  +A   
Sbjct: 183 RDYKSAVNNFRTVASADPEHVRAPEALLSMANCQVEL--------------KDAKSARKT 228

Query: 213 FQLVLANYSDAEHAEEAMARLVE 235
            + ++  Y  +E A  A  RL +
Sbjct: 229 LEELVKTYPQSEAASVAKERLSK 251


>gi|118578970|ref|YP_900220.1| putative lipoprotein [Pelobacter propionicus DSM 2379]
 gi|118501680|gb|ABK98162.1| lipoprotein, putative [Pelobacter propionicus DSM 2379]
          Length = 236

 Score = 64.8 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 43/124 (34%), Gaps = 8/124 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y KA       +FS A + F     + P +     +L       Y+   + QAA+  ++ 
Sbjct: 120 YVKAFGLYSANSFSAAIQAFQAFLANSPGSDYTPNALYWIGECHYTLSDFPQAAAAFKKL 179

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
              YP+S         +G            D+       +    ++ +Y +SP    AR 
Sbjct: 180 AEGYPKSAKAPDALLKLG---YTQTAMKQRDR-----ATRTFESLIRQYPSSPAASRARE 231

Query: 181 YVTV 184
            +T 
Sbjct: 232 RLTA 235



 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 41/139 (29%), Gaps = 22/139 (15%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +  + AF  YSA  +  A    + ++   P S       Y +G  +  +           
Sbjct: 118 AEYVKAFGLYSANSFSAAIQAFQAFLANSPGSDYTPNALYWIGECHYTLSDFP------- 170

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
                   ++ E Y  S     A   +   +  +  ++               A   F+ 
Sbjct: 171 -QAAAAFKKLAEGYPKSAKAPDALLKLGYTQTAMKQRD--------------RATRTFES 215

Query: 216 VLANYSDAEHAEEAMARLV 234
           ++  Y  +  A  A  RL 
Sbjct: 216 LIRQYPSSPAASRARERLT 234



 Score = 49.3 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 31/105 (29%), Gaps = 14/105 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             +Q     +     S Y   A +++                 Y       AA   F+ +
Sbjct: 134 AAIQAFQAFLANSPGSDYTPNALYWIGECH-------------YTLSDFPQAAAA-FKKL 179

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
              Y  +  A +A+ +L     A+   D A      +  +YP   
Sbjct: 180 AEGYPKSAKAPDALLKLGYTQTAMKQRDRATRTFESLIRQYPSSP 224



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 35/104 (33%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
            F +          Q+ +    +S         +Y          +F +A   F + +  
Sbjct: 123 AFGLYSANSFSAAIQAFQAFLANSPGSDYTPNALYWIGECHYTLSDFPQAAAAFKKLAEG 182

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           +P +  A  +LL   + Q +  +  +A    E  I QYP S   
Sbjct: 183 YPKSAKAPDALLKLGYTQTAMKQRDRATRTFESLIRQYPSSPAA 226



 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 2/68 (2%)

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
             + AAI  FQ  LAN   +++   A+  + E +  L+   +A      + E YP+   A
Sbjct: 130 NSFSAAIQAFQAFLANSPGSDYTPNALYWIGECHYTLSDFPQAAAAFKKLAEGYPKS--A 187

Query: 264 RYVETLVK 271
           +  + L+K
Sbjct: 188 KAPDALLK 195


>gi|238757960|ref|ZP_04619141.1| hypothetical protein yaldo0001_8360 [Yersinia aldovae ATCC 35236]
 gi|238703714|gb|EEP96250.1| hypothetical protein yaldo0001_8360 [Yersinia aldovae ATCC 35236]
          Length = 260

 Score = 64.8 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 49/126 (38%), Gaps = 9/126 (7%)

Query: 61  YEKAVL-FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  AV   L+++ + +A   F    + +P +     +      + Y+ GK   AA     
Sbjct: 143 YNAAVSLALEKKQYDQAITAFQSFVKQYPKSTYQPNANYWLGQLYYNKGKKDDAAYYYAV 202

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       + VG+        +  D+  +        +++++Y N+   K A+
Sbjct: 203 VVKNYPKSPKSSEAMFKVGV--------IMQDKGQSDKAKAVYQQVIKQYPNTDAAKQAQ 254

Query: 180 FYVTVG 185
             ++  
Sbjct: 255 KRLSAL 260



 Score = 54.0 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 14/129 (10%)

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           S       +  +++     +      V++Y  S Y   A +++              G+ 
Sbjct: 141 SDYNAAVSLALEKKQYDQAITAFQSFVKQYPKSTYQPNANYWL--------------GQL 186

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           Y  +G+   A   + +V+ NY  +  + EAM ++          D+A+ V   + ++YP 
Sbjct: 187 YYNKGKKDDAAYYYAVVVKNYPKSPKSSEAMFKVGVIMQDKGQSDKAKAVYQQVIKQYPN 246

Query: 260 GYWARYVET 268
              A+  + 
Sbjct: 247 TDAAKQAQK 255


>gi|255012572|ref|ZP_05284698.1| TPR domain-containing protein [Bacteroides sp. 2_1_7]
          Length = 999

 Score = 64.8 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/239 (11%), Positives = 71/239 (29%), Gaps = 45/239 (18%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
               + +   + ++  ++KA   +     +       +   +     +  +   +Y +A 
Sbjct: 466 NDAYFWRGESYYRQGEYNKAISDYRTYLNNTRQRNTDMYALAHYNLGYSYFKLKEYGEAL 525

Query: 115 SLGEEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM-------------- 158
           +   +Y+      ++      Y  +G       +    ++  T+                
Sbjct: 526 NRFRQYVNLESNQQTPAYADAYNRIGDCLFHNRQFAMAEENYTRAAQLQPSAGDYSVYQK 585

Query: 159 -------------LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
                        +  M R++  +  S YV  A                E GR Y+    
Sbjct: 586 GFLLGLQKDYKGKISVMDRLIREFPESQYVDDAL--------------FEKGRSYVLLDN 631

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
              A   F+ ++ ++  +  A +A  +L   Y      ++A +    +   YP    A+
Sbjct: 632 NQTAAASFEQLMRDFPQSSLARKAGVQLGLIYFNDNQPEKAADAYKSVISNYPGSEEAK 690



 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 94/268 (35%), Gaps = 57/268 (21%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
             I +C +VG    S +  Y            ++ +       +N+S   +      +  
Sbjct: 4   ILIPLCLVVGSHMASGQRSY-----QFDAPNRLFVEGKELFSLKNYSGCIDKLEAYKQHS 58

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM--- 144
             A + +++  M  +  Y  G+   A  L ++Y+  YP S++ D V +L+G ++      
Sbjct: 59  TDADLIQEADYMLVYSAYEQGR-PNAVELLKDYLDVYPASRHADEVNFLIGSAHFGQGEY 117

Query: 145 -----------IRDVPYDQRAT---------------KLMLQYMSRIVERYTNSPYVKGA 178
                      I  +  +Q+                 +    Y +RI +    + Y + +
Sbjct: 118 QKAIFWFNESNIDMLSPEQQEAYCFRLAYSLLQIGDMEKARGYFARIEQI--GTKYREAS 175

Query: 179 RFYVTVG-------RNQLAA----------KE---VEIGRYYLKRGEYVAAIPRFQLVLA 218
            +YV           N L            KE     I + Y  + +Y   I   + +LA
Sbjct: 176 TYYVAYIDYATGKYNNALVEFTRLKDLPDYKERSLYYITQIYFIQNKYEKVISEGKELLA 235

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEA 246
           +Y D+E+  E    +  AY  L   D+A
Sbjct: 236 SYPDSENNSEVYRIMGNAYYHLGNEDQA 263



 Score = 59.4 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 76/216 (35%), Gaps = 33/216 (15%)

Query: 46  VYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFP----FAGVARKSLLMS 100
           V L+S        + Y +        + F+ A E + + ++  P    ++   +  LL  
Sbjct: 532 VNLESNQQTPAYADAYNRIGDCLFHNRQFAMAEENYTRAAQLQPSAGDYSVYQKGFLLGL 591

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
                    Y+   S+ +  I ++PES+ VD   +  G SY  +  +        +    
Sbjct: 592 ------QKDYKGKISVMDRLIREFPESQYVDDALFEKGRSYVLLDNN--------QTAAA 637

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
              +++  +  S   + A   + +               Y    +   A   ++ V++NY
Sbjct: 638 SFEQLMRDFPQSSLARKAGVQLGLI--------------YFNDNQPEKAADAYKSVISNY 683

Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
             +E A+ A+  L   Y+ L  ++      + +   
Sbjct: 684 PGSEEAKVALQDLKSVYIELNDINSFAAYANSLGGN 719



 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 76/234 (32%), Gaps = 36/234 (15%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-KSLLMSAFVQYSAGKYQQAASLGE 118
           +++            KA + F++      +   +R  +        Y  G+Y +A S   
Sbjct: 431 LFQLGTQAFTNMELDKAVDLFSRAISLGAYNLESRNDAYFWRGESYYRQGEYNKAISDYR 490

Query: 119 EYITQYPESKNVD-YVY--YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SP 173
            Y+      +N D Y    Y +G SY ++        +     L    + V   +N  +P
Sbjct: 491 TYLN-NTRQRNTDMYALAHYNLGYSYFKL--------KEYGEALNRFRQYVNLESNQQTP 541

Query: 174 YVKGARFYVTVG-------------RNQLAAKEVEIGRY--YLK------RGEYVAAIPR 212
               A   +                  + A  +   G Y  Y K      + +Y   I  
Sbjct: 542 AYADAYNRIGDCLFHNRQFAMAEENYTRAAQLQPSAGDYSVYQKGFLLGLQKDYKGKISV 601

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
              ++  + ++++ ++A+     +YV L     A      +   +PQ   AR  
Sbjct: 602 MDRLIREFPESQYVDDALFEKGRSYVLLDNNQTAAASFEQLMRDFPQSSLARKA 655



 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 49/167 (29%), Gaps = 32/167 (19%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S TD   + ++Y   V +  + N+S A     +  R+     +++ + L           
Sbjct: 272 SSTDSPLRGDLYILGVCYYNKGNYSSAVNALGRTVREN--DALSQNAYLYLGQSYLKLKD 329

Query: 110 YQQAASLGE-----EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
              A    E      +     + K      Y    +YA +I +  +        +     
Sbjct: 330 KNNARMAFEAAATSSFDK---QVKEA--AMY----NYALLIHETAF--TGFGESVTIFED 378

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
            +  + NS Y      Y+                 YL    Y AA+ 
Sbjct: 379 FLNDFPNSKYADKVNDYLVEV--------------YLTTKNYQAALN 411


>gi|302338557|ref|YP_003803763.1| hypothetical protein Spirs_2047 [Spirochaeta smaragdinae DSM 11293]
 gi|301635742|gb|ADK81169.1| conserved hypothetical protein [Spirochaeta smaragdinae DSM 11293]
          Length = 314

 Score = 64.8 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 77/203 (37%), Gaps = 11/203 (5%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           R+V LD+     +    Y  A   +  +N+  A         +FP +   R        +
Sbjct: 52  REVILDNDAQKLHGAAYYWLARSEMALKNYDDAARDLEYFLENFPKSSFYRDGSYWKGRL 111

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
            +    +  A     ++I  YP+ + V   YY +G S   +           +   +  +
Sbjct: 112 LFLQNDFDNAIRALYDFIEAYPDHEFVANAYYWIGESLFAL--------GHLEKAQRIFN 163

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY-LKRGEYVAAIPRFQLVLANYSD 222
            I+  Y  S  V+ +R+ +++   ++  +E E+ R   +   EY++A+  FQ     Y  
Sbjct: 164 LIITDYPASFKVEASRYRLSLI--EMKEREEELMRLLKMSHEEYLSALEEFQRREKMYDQ 221

Query: 223 AEHAEEAMARLVEAYVALALMDE 245
           A    +     + A    AL+ E
Sbjct: 222 AISGYQRKLTALTANDKEALVQE 244



 Score = 38.6 bits (89), Expect = 0.94,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 44/128 (34%), Gaps = 21/128 (16%)

Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF---YVTVGRNQLAAK 192
           L G +Y  + R      +      + +   +E +  S + +   +    +   +N     
Sbjct: 63  LHGAAYYWLARS-EMALKNYDDAARDLEYFLENFPKSSFYRDGSYWKGRLLFLQN----- 116

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
                       ++  AI      +  Y D E    A   + E+  AL  +++A+ + +L
Sbjct: 117 ------------DFDNAIRALYDFIEAYPDHEFVANAYYWIGESLFALGHLEKAQRIFNL 164

Query: 253 IQERYPQG 260
           I   YP  
Sbjct: 165 IITDYPAS 172


>gi|188996311|ref|YP_001930562.1| Tetratricopeptide TPR_2 repeat protein [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188931378|gb|ACD66008.1| Tetratricopeptide TPR_2 repeat protein [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 938

 Score = 64.4 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 46/221 (20%), Positives = 89/221 (40%), Gaps = 31/221 (14%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKY 110
           D+  ++  Y  A  F    +F +A + F++    +        RK+LL  A   Y+ G+ 
Sbjct: 563 DLIAKKAYYLYAYTFFSSGDFVRASQEFSKFLEKYKNDDDIYTRKALLRLADSYYNLGER 622

Query: 111 QQAASLGEEYITQYPESKN-VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
             A ++ +++IT+Y  +K+ +D  Y L+ +       DV             +   + +Y
Sbjct: 623 DLAVNIYKDFITKYSGTKDSIDAAYNLIILESKGSSEDVE----------SMIKSFLAKY 672

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
            N P     +  +                 Y  +G+   AI  +Q V A  S+++ +  A
Sbjct: 673 PNYPLANILKIQLAEI--------------YQNKGKIEDAIKIYQEVAA--SNSKESALA 716

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
             +L E+Y  L  +D+A++V  LI          +    L+
Sbjct: 717 TYKLAESYYKLNQLDKAKQV--LIDYLNTNNEEYKVPSKLL 755



 Score = 42.8 bits (100), Expect = 0.054,   Method: Composition-based stats.
 Identities = 17/49 (34%), Positives = 27/49 (55%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
           +LL  A   Y+ G    A S  E++I +Y + KN+ Y YYL+G+    +
Sbjct: 113 ALLSDAIDYYNKGDLLFAESSLEKFIEKYKDHKNLFYAYYLLGVVKYNL 161



 Score = 39.3 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 43/133 (32%), Gaps = 14/133 (10%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           ++ A + L++ ++ KA  YF +     P      +         Y     + A S  E  
Sbjct: 784 FKLAKILLQKGDYDKASAYFKELLEKHP--EKVNELSFYIGKTYYLMNNEKDAVSYLENG 841

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
                   +    YYL+GM Y +               L Y    +  Y  +  +  A+ 
Sbjct: 842 TKS-SNYNDAAESYYLLGMIYNK---------ENPNKALNYFLNGIYLYPEAKDIT-AKS 890

Query: 181 YVTVGRNQL-AAK 192
            +   +  L A K
Sbjct: 891 RIEAAKILLKAEK 903


>gi|329964267|ref|ZP_08301368.1| tetratricopeptide repeat protein [Bacteroides fluxus YIT 12057]
 gi|328525572|gb|EGF52615.1| tetratricopeptide repeat protein [Bacteroides fluxus YIT 12057]
          Length = 1010

 Score = 64.4 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 73/212 (34%), Gaps = 31/212 (14%)

Query: 46  VYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDF-PFAGVA--RKSLLMSA 101
           V L+   +     + Y +     L  + F +A  Y+ +      P    +  + +L+   
Sbjct: 544 VQLEKGENPTALADAYNRIGDCNLHVRRFDEAKRYYTKAESLGTPAGDYSFYQLALVAG- 602

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
                   Y    SL +   ++YP S       Y  G SY Q            +  +  
Sbjct: 603 ----LQKDYNGKVSLLDRLASKYPHSPYAINALYEKGRSYVQSNNS--------RQAIAA 650

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
              ++ +Y  SP  + A                EIG  Y +  +Y  AI  ++ V+  Y 
Sbjct: 651 FRELLNKYPESPVSRKAAA--------------EIGLLYYQNDDYDRAIEAYKHVVTQYP 696

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +E A  AM  L   YV    +DE   + + +
Sbjct: 697 GSEEARLAMRDLKSIYVDANRVDEFATLAAQM 728



 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/307 (12%), Positives = 84/307 (27%), Gaps = 68/307 (22%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           +K +  +  ++    L+   + S ++            + +Y++     +++ +S A   
Sbjct: 3   HKISRILCTALCCAPLLATAQTSEKNT---------SPQGLYQEGQSLFQQKAYSAAISP 53

Query: 80  FNQCSRDF-----PFAGVARK--SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
                +       P +    +  +  M     Y      Q+  L   ++ +YP++ + + 
Sbjct: 54  LQAFIKQMDADGKPLSATGERQEAEYMLVCAAYELR-VPQSIELLRNFLDEYPDTPHANR 112

Query: 133 VYYLVGMSYA-----------------QMIRDVPYDQ------------RATKLMLQYMS 163
           +Y L+  +Y                   ++     D                K    +  
Sbjct: 113 IYALIASAYFFEGKYDDALAMFNSARLDLLGSEERDDMTYRLATCYLKTGNVKEAAIWFE 172

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKE--------------------VEIGRYYLKR 203
            +  R T   Y     +Y++  R      +                      I   YL +
Sbjct: 173 TL--RSTGKKYAADCSYYLSYIRYTQGRYDEALSGFLPLQDCTKYEALVPYYIAEIYLIK 230

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
             Y  A    Q  L+ Y    H  E    L  A        EA +      E        
Sbjct: 231 KNYDKAEIVAQNYLSAYPGQPHTGEMYRVLGTAEYHFGKYHEAMKSFERYLENNAGTTHR 290

Query: 264 RYVETLV 270
           R    ++
Sbjct: 291 RDALYML 297



 Score = 49.3 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 76/254 (29%), Gaps = 61/254 (24%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK--------SLLMSAFVQYSAG 108
              +Y     + +     +A  +FN       +  + R+        +    A++ +   
Sbjct: 478 ADALYWLGEAYYRLGRMQEAARHFND------YLTLTRQRDTEMFALAYYNLAYIAFHQK 531

Query: 109 KYQQAASLGEEYITQ----YPESKNVDYVYYLVGMSY----------------------- 141
            Y  A S    ++       P    +   Y  +G                          
Sbjct: 532 DYATAESRFRNFVQLEKGENPT--ALADAYNRIGDCNLHVRRFDEAKRYYTKAESLGTPA 589

Query: 142 ----AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
                  +  V   Q+     +  + R+  +Y +SPY            N L  K    G
Sbjct: 590 GDYSFYQLALVAGLQKDYNGKVSLLDRLASKYPHSPYA----------INALYEK----G 635

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           R Y++      AI  F+ +L  Y ++  + +A A +   Y      D A E    +  +Y
Sbjct: 636 RSYVQSNNSRQAIAAFRELLNKYPESPVSRKAAAEIGLLYYQNDDYDRAIEAYKHVVTQY 695

Query: 258 PQGYWARYVETLVK 271
           P    AR     +K
Sbjct: 696 PGSEEARLAMRDLK 709



 Score = 42.8 bits (100), Expect = 0.047,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 73/210 (34%), Gaps = 15/210 (7%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A ++L ++N+ KA          +P      +   +    +Y  GKY +A    E Y
Sbjct: 221 YYIAEIYLIKKNYDKAEIVAQNYLSAYPGQPHTGEMYRVLGTAEYHFGKYHEAMKSFERY 280

Query: 121 ITQYPESKNVDYVYYLVGMSYAQ-----MIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
           +     + +     Y++GMS  Q      + D+  +       L   + +          
Sbjct: 281 LENNAGTTHRRDALYMLGMSCYQCGVYSQVPDILGEVTTGNDALSQNAYLHMGLAYLQLA 340

Query: 176 KGARFYVTVGRNQLAAKEVEI---GRYYLKR-------GEYVAAIPRFQLVLANYSDAEH 225
              +  +   +   +  +++I     Y             +  ++  F+  L  + ++ +
Sbjct: 341 DKTKARMAFEQAAASNADLKIKEQAAYNYALCIHETSYSAFGESVTVFEKFLNEFPNSPY 400

Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQE 255
           A++    LVE Y+     D A + +  I  
Sbjct: 401 ADKVSNYLVEVYMNTRSYDAALKSIERITH 430



 Score = 39.3 bits (91), Expect = 0.62,   Method: Composition-based stats.
 Identities = 33/236 (13%), Positives = 76/236 (32%), Gaps = 40/236 (16%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAAS 115
           +++          F +A  YFNQ +          ++   + +      Y  G+ Q+AA 
Sbjct: 443 LFQLGTQSFANTRFEQAIGYFNQSTAL---GQYNLQTKADALYWLGEAYYRLGRMQEAAR 499

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQM--IRDVPYDQRATKLMLQYMSRIVERYTNSP 173
              +Y+T     ++ +    +  ++Y  +  I     D    +   +   ++ +    +P
Sbjct: 500 HFNDYLTL-TRQRDTE----MFALAYYNLAYIAFHQKDYATAESRFRNFVQLEKG--ENP 552

Query: 174 YV-KGARFYVTVGRNQLAAKEVEIGRYYLK----------------------RGEYVAAI 210
                A   +      +   + E  RYY K                      + +Y   +
Sbjct: 553 TALADAYNRIGDCNLHVRRFD-EAKRYYTKAESLGTPAGDYSFYQLALVAGLQKDYNGKV 611

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
                + + Y  + +A  A+     +YV      +A      +  +YP+   +R  
Sbjct: 612 SLLDRLASKYPHSPYAINALYEKGRSYVQSNNSRQAIAAFRELLNKYPESPVSRKA 667



 Score = 37.8 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 35/135 (25%), Gaps = 53/135 (39%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP- 211
            A    +    + +  + NSPY      Y+                 Y+    Y AA+  
Sbjct: 379 SAFGESVTVFEKFLNEFPNSPYADKVSNYLVEV--------------YMNTRSYDAALKS 424

Query: 212 ------------------------------RFQLVLANYSDAEHA--------EEAMARL 233
                                         RF+  +  ++ +            +A+  L
Sbjct: 425 IERITHPSKAILEAKQKILFQLGTQSFANTRFEQAIGYFNQSTALGQYNLQTKADALYWL 484

Query: 234 VEAYVALALMDEARE 248
            EAY  L  M EA  
Sbjct: 485 GEAYYRLGRMQEAAR 499


>gi|298529331|ref|ZP_07016734.1| Tetratricopeptide TPR_2 repeat protein [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298510767|gb|EFI34670.1| Tetratricopeptide TPR_2 repeat protein [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 874

 Score = 64.4 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 69/233 (29%), Gaps = 36/233 (15%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR--DFPFAGVARKSLL 98
             +         ++    E+     + +    ++ A + F +       P      + L 
Sbjct: 225 TPAELQEEPPPAEMDRYEEMIAAGQMAMSGAEYAIAADIFEELKNDPQLP-EEHTEEVLY 283

Query: 99  MSAFVQYSA------GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
             A   +        G +Q      E  ++  P S  +      +G  + Q+  +     
Sbjct: 284 SYAQANFQEHSHDIPGNFQDVLRPFERAVSANPGSDRLPEALLNMGYIHLQVGNEP---- 339

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
                   Y   + +R+     V    +Y+              G +Y  R  Y  A   
Sbjct: 340 ----EARGYFDLLRDRFPEHEAVPATHYYM--------------GEHYKDRERYEEAADE 381

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
           F+ V+  Y   +  + A   L      L L ++A +++      Y    W RY
Sbjct: 382 FEEVVQEYPQDDLVKPAAVALTRVLNELNLDEQAGDMLE-----YIDNRWPRY 429



 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 74/239 (30%), Gaps = 38/239 (15%)

Query: 49  DSVTDVRYQREVYEKAVLFLKE------QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
             + +   +  +Y  A    +E       NF      F +     P +    ++LL   +
Sbjct: 271 PQLPEEHTEEVLYSYAQANFQEHSHDIPGNFQDVLRPFERAVSANPGSDRLPEALLNMGY 330

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
           +    G   +A    +    ++PE + V   +Y +G  Y         D+   +      
Sbjct: 331 IHLQVGNEPEARGYFDLLRDRFPEHEAVPATHYYMGEHY--------KDRERYEEAADEF 382

Query: 163 SRIVERYTNSPYV-----------------KGARFYVTVGRNQLAAKEVE-------IGR 198
             +V+ Y     V                 + A   +    N+     ++        G 
Sbjct: 383 EEVVQEYPQDDLVKPAAVALTRVLNELNLDEQAGDMLEYIDNRWPRYHLDDPDFLVLAGN 442

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
              +  +Y  A  +F   +    D +  + +MAR+ +        D ARE+      +Y
Sbjct: 443 ILYRNEDYQDAREKFMHYINLLPDGDQVDVSMARVGDILYQQGHEDSAREMYEQTARQY 501



 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 64/175 (36%), Gaps = 41/175 (23%)

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            + + S +FP + +A  +LL  A      G Y +A    E++  +Y              
Sbjct: 528 LYERISEEFPDSPLAPVALLRLADWNLDNGLYDEAMDNVEDFYDRY-------------- 573

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIV-ERYTNSPY--VKGARFYVTVGRNQLAAKEVE 195
            S+ +M        RA +  +     +V E + +  Y  +  A             K++ 
Sbjct: 574 -SHREMW------PRALQTGVDAFESLVAENFPDQEYDDIIDAWERHDYLNE---NKDM- 622

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
                L R   +A       + + Y D E+ +E++ RL E ++ +  +DE     
Sbjct: 623 -----LDREALLA-------LASAYWDMENMQESL-RLAEPFLDMDKIDEHNIAA 664


>gi|115374590|ref|ZP_01461869.1| tetratricopeptide repeat domain protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|115368356|gb|EAU67312.1| tetratricopeptide repeat domain protein [Stigmatella aurantiaca
           DW4/3-1]
          Length = 1077

 Score = 64.4 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 71/224 (31%), Gaps = 35/224 (15%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           ++ A   L    + +A + +     + P    A K+L  +A    +  ++  A  L E  
Sbjct: 655 FKLADQLLAAGQYDEAAKKYLLLVEEAPRHEFADKALNNAAIAYENTRRFDSALKLYERI 714

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-- 178
             +YP SK  D   + V +      +   +D       +    ++V+ Y  S   + A  
Sbjct: 715 YREYPNSKLADAALFRVAV---NAEKSYDFD-----KAVVNYQKLVKDYPTSQEREAALY 766

Query: 179 -RFYVTVGRN----------QLAA----------KEVEIGRYYLKRGEYVAAIPRFQLVL 217
               +   +            LA            +      Y K  ++   I      +
Sbjct: 767 NAARLMEAQQRYPEAAKAFVHLAEQYPKAEDAPKHQYRAALIYEKNQDWWRTIRELNTFV 826

Query: 218 ANYSDAEH----AEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           + ++          EA  R+ +A++ L     A    ++    +
Sbjct: 827 SAFAKKPAQGELVVEAKKRIGDAFLKLNDERNAERAWTVAASEF 870



 Score = 44.0 bits (103), Expect = 0.020,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 52/164 (31%), Gaps = 29/164 (17%)

Query: 105 YSAGKYQQAASLGEEYITQY-------PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
           +       AA   +E   +Y       P  +  D       ++Y           R    
Sbjct: 655 FKLADQLLAAGQYDEAAKKYLLLVEEAPRHEFADKALNNAAIAYENT--------RRFDS 706

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
            L+   RI   Y NS     A F V    N  A K  +          +  A+  +Q ++
Sbjct: 707 ALKLYERIYREYPNSKLADAALFRV--AVN--AEKSYD----------FDKAVVNYQKLV 752

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            +Y  ++  E A+        A     EA +    + E+YP+  
Sbjct: 753 KDYPTSQEREAALYNAARLMEAQQRYPEAAKAFVHLAEQYPKAE 796



 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 30/79 (37%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           + +  D  T    +  +Y  A L   +Q + +A + F   +  +P A  A K    +A +
Sbjct: 749 QKLVKDYPTSQEREAALYNAARLMEAQQRYPEAAKAFVHLAEQYPKAEDAPKHQYRAALI 808

Query: 104 QYSAGKYQQAASLGEEYIT 122
                 + +       +++
Sbjct: 809 YEKNQDWWRTIRELNTFVS 827



 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 51/137 (37%), Gaps = 4/137 (2%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
           +Y +          ++  AV   K  +F KA   + +  +D+P +     +L  +A +  
Sbjct: 714 IYREYPNSKLADAALFRVAVNAEKSYDFDKAVVNYQKLVKDYPTSQEREAALYNAARLME 773

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
           +  +Y +AA        QYP++++     Y   + Y +  +D     R     +   ++ 
Sbjct: 774 AQQRYPEAAKAFVHLAEQYPKAEDAPKHQYRAALIY-EKNQDWWRTIRELNTFVSAFAKK 832

Query: 166 VERYTNSPYVKGARFYV 182
                    V  A+  +
Sbjct: 833 PA---QGELVVEAKKRI 846



 Score = 36.2 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 59/181 (32%), Gaps = 25/181 (13%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           NF  +   + +  ++FP   +   +  +  +      ++ ++ +  ++ I +YP+S+   
Sbjct: 133 NFGLSIALYQRLIQEFPDYRLNDGAWYLLGYCLEKQNQFDESHATYQQLIARYPKSRFAI 192

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
             +  +G  Y     D                    R  + P    A + +         
Sbjct: 193 EAWVRIGEHYFDSYSD-----AEALAKAAQAYEAATRDPSHPLYDKALYKLGWA------ 241

Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
                   Y +   +  ++ RF  +   Y   +        L E +    L +EA + V+
Sbjct: 242 --------YYRMDRFDESVDRFLDLADFYETQKQT------LGEGFGGGDLREEALQYVA 287

Query: 252 L 252
           +
Sbjct: 288 I 288


>gi|148265712|ref|YP_001232418.1| tetratricopeptide domain-containing protein [Geobacter
           uraniireducens Rf4]
 gi|146399212|gb|ABQ27845.1| Tetratricopeptide domain protein [Geobacter uraniireducens Rf4]
          Length = 239

 Score = 64.4 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 46/138 (33%), Gaps = 8/138 (5%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           +       +    ++ Y KA       N+S A E F    + +P +  A  ++       
Sbjct: 107 NKEAAPSDNDSAPQDAYIKAFGLFSANNYSGAIEAFEAFVKSYPDSEYAGNAVYWVGECY 166

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y+   Y +A     + +  YP+   V      +G S   M   +             +  
Sbjct: 167 YTQHNYSKALESFSKVVVDYPKGNKVPDAMLKIGYSLISMNEPL--------KARAELQS 218

Query: 165 IVERYTNSPYVKGARFYV 182
           +V +Y  SP    AR  +
Sbjct: 219 LVGKYPKSPAAAKARERL 236



 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 47/143 (32%), Gaps = 22/143 (15%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           A +   + AF  +SA  Y  A    E ++  YP+S+      Y VG  Y          Q
Sbjct: 118 APQDAYIKAFGLFSANNYSGAIEAFEAFVKSYPDSEYAGNAVYWVGECYYT--------Q 169

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
                 L+  S++V  Y     V  A   +                  +   E + A   
Sbjct: 170 HNYSKALESFSKVVVDYPKGNKVPDAMLKIGYSL--------------ISMNEPLKARAE 215

Query: 213 FQLVLANYSDAEHAEEAMARLVE 235
            Q ++  Y  +  A +A  RL  
Sbjct: 216 LQSLVGKYPKSPAAAKARERLGR 238



 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 40/104 (38%), Gaps = 14/104 (13%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
            ++     V+ Y +S Y   A ++V                 Y  +  Y  A+  F  V+
Sbjct: 138 AIEAFEAFVKSYPDSEYAGNAVYWVGEC--------------YYTQHNYSKALESFSKVV 183

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            +Y       +AM ++  + +++    +AR  +  +  +YP+  
Sbjct: 184 VDYPKGNKVPDAMLKIGYSLISMNEPLKARAELQSLVGKYPKSP 227


>gi|94967621|ref|YP_589669.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94549671|gb|ABF39595.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
           Ellin345]
          Length = 294

 Score = 64.4 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 43/133 (32%), Gaps = 8/133 (6%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
                  +Y  A+       +  A   F    + +    +A  +    A ++Y  G +  
Sbjct: 157 QAPPADVLYNNALRDYNAGKYDLASGEFGDFMKFYADNDLAGNAQFYIADIEYRQGNFDN 216

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A    ++ + QYP            G +  ++       Q+     ++ +  ++ RY  S
Sbjct: 217 AVKDYDKVLEQYPSGNKAPAAQLKKGFALLEL------GQKDAG--VRELRSLINRYPRS 268

Query: 173 PYVKGARFYVTVG 185
              + AR  +   
Sbjct: 269 IEAQQARDRLARL 281



 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 48/131 (36%), Gaps = 22/131 (16%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y+AGKY  A+    +++  Y ++       + +         D+ Y Q      ++   +
Sbjct: 172 YNAGKYDLASGEFGDFMKFYADNDLAGNAQFYIA--------DIEYRQGNFDNAVKDYDK 223

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           ++E+Y +      A+        +L  K+              A +   + ++  Y  + 
Sbjct: 224 VLEQYPSGNKAPAAQLKKGFALLELGQKD--------------AGVRELRSLINRYPRSI 269

Query: 225 HAEEAMARLVE 235
            A++A  RL  
Sbjct: 270 EAQQARDRLAR 280



 Score = 38.9 bits (90), Expect = 0.75,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 28/78 (35%), Gaps = 1/78 (1%)

Query: 184 VGRNQLAAK-EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
              N LA   +  I     ++G +  A+  +  VL  Y     A  A  +   A + L  
Sbjct: 191 YADNDLAGNAQFYIADIEYRQGNFDNAVKDYDKVLEQYPSGNKAPAAQLKKGFALLELGQ 250

Query: 243 MDEAREVVSLIQERYPQG 260
            D     +  +  RYP+ 
Sbjct: 251 KDAGVRELRSLINRYPRS 268


>gi|116619653|ref|YP_821809.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116222815|gb|ABJ81524.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 310

 Score = 64.4 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/123 (12%), Positives = 39/123 (31%), Gaps = 7/123 (5%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
             +++Y+ A    +   +  A + F    + +    +A  +    A + Y    Y  A  
Sbjct: 168 PAQKLYDTARGDYQGGKYDLAVQEFADYLKYYGNTDLAPNAQFYVAMIHYGQKNYDDAVK 227

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
             +  + +YP++          G +  +M                    ++ R+  +   
Sbjct: 228 EFDMVLEKYPDNNKTPEALLYKGRALVKM-------PGHKTDGAAEFMEVIRRFPKTDEA 280

Query: 176 KGA 178
           + A
Sbjct: 281 QQA 283



 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 46/139 (33%), Gaps = 21/139 (15%)

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
            +  + L  +A   Y  GKY  A     +Y+  Y  +       + V M +         
Sbjct: 166 PMPAQKLYDTARGDYQGGKYDLAVQEFADYLKYYGNTDLAPNAQFYVAMIHY-------- 217

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
            Q+     ++    ++E+Y ++     A  Y      ++            K     AA 
Sbjct: 218 GQKNYDDAVKEFDMVLEKYPDNNKTPEALLYKGRALVKMPGH---------KTD--GAAE 266

Query: 211 PRFQLVLANYSDAEHAEEA 229
             F  V+  +   + A++A
Sbjct: 267 --FMEVIRRFPKTDEAQQA 283



 Score = 45.5 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 39/107 (36%), Gaps = 17/107 (15%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
           L +Q  +  ++ Y N+     A+                +   +  +  Y  A+  F +V
Sbjct: 187 LAVQEFADYLKYYGNTDLAPNAQ--------------FYVAMIHYGQKNYDDAVKEFDMV 232

Query: 217 LANYSDAEHAEEAMARLVEAYVAL--ALMDEAREVVSLIQERYPQGY 261
           L  Y D     EA+     A V +     D A E + +I  R+P+  
Sbjct: 233 LEKYPDNNKTPEALLYKGRALVKMPGHKTDGAAEFMEVI-RRFPKTD 278


>gi|308186085|ref|YP_003930216.1| hypothetical protein Pvag_0562 [Pantoea vagans C9-1]
 gi|308056595|gb|ADO08767.1| Uncharacterized protein precursor [Pantoea vagans C9-1]
          Length = 264

 Score = 64.4 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 47/137 (34%), Gaps = 9/137 (6%)

Query: 50  SVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           +          Y  AV   L+++ + +A        + +P +     +      + Y+ G
Sbjct: 136 APAQTGDANSDYNAAVALILEKKQYDQAISALQAWVKRYPDSTYQPNANYWLGQLNYNKG 195

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           K   AA      +  YP+S         VG+        +  +++ T        ++++ 
Sbjct: 196 KKDDAAYYYATVVKNYPKSPKAAEALLKVGV--------IMQEKKDTAKAKAVFQQVIKL 247

Query: 169 YTNSPYVKGARFYVTVG 185
           Y ++   K A+  +   
Sbjct: 248 YPDTESAKQAQKRLASL 264



 Score = 45.5 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 45/127 (35%), Gaps = 22/127 (17%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +Y QA S  + ++ +YP+S       Y +G       +              Y + +V+
Sbjct: 158 KQYDQAISALQAWVKRYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYYATVVK 209

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y  SP    A   V V                 ++ +   A   FQ V+  Y D E A+
Sbjct: 210 NYPKSPKAAEALLKVGVIMQ--------------EKKDTAKAKAVFQQVIKLYPDTESAK 255

Query: 228 EAMARLV 234
           +A  RL 
Sbjct: 256 QAQKRLA 262



 Score = 39.7 bits (92), Expect = 0.38,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 2/71 (2%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           L++ +Y  AI   Q  +  Y D+ +   A   L +        D+A    + + + YP+ 
Sbjct: 155 LEKKQYDQAISALQAWVKRYPDSTYQPNANYWLGQLNYNKGKKDDAAYYYATVVKNYPKS 214

Query: 261 YWARYVETLVK 271
              +  E L+K
Sbjct: 215 --PKAAEALLK 223


>gi|163783489|ref|ZP_02178480.1| hypothetical protein HG1285_08749 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881253|gb|EDP74766.1| hypothetical protein HG1285_08749 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 850

 Score = 64.4 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 17/143 (11%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            E+Y   + F  E  + +A  YF +            K+LL  A   Y+ G Y++A  L 
Sbjct: 494 EEIYLMGMSFFIEGKYREAIAYFKRLLDR---GEFKSKALLRIADSYYNLGNYERAKELY 550

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           +E +T YP+S         + ++  ++       Q+ TK + + +     ++  SP +  
Sbjct: 551 KEILTFYPDSTEAFDAT--LALAQIEL-------QKPTKDLEKLVRDFERKFPGSPMITD 601

Query: 178 -----ARFYVTVGRNQLAAKEVE 195
                A  Y+  GR   A + +E
Sbjct: 602 LKYQLANLYIKEGRRSEARRILE 624



 Score = 40.1 bits (93), Expect = 0.37,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 67/207 (32%), Gaps = 43/207 (20%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y KA+       +S+  +                KS L+ A     +       +L  ++
Sbjct: 440 YHKALALFNAGRYSEVIKVLKGKEDL--------KSRLLKA----KSAISIGNGALARKF 487

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +T     +      YL+GMS+          +   +  + Y  R+++R     +   A  
Sbjct: 488 LT-----EESGEEIYLMGMSFF--------IEGKYREAIAYFKRLLDR---GEFKSKALL 531

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
                          I   Y   G Y  A   ++ +L  Y D+  A +A   L +  +  
Sbjct: 532 R--------------IADSYYNLGNYERAKELYKEILTFYPDSTEAFDATLALAQIELQK 577

Query: 241 ALMDEAREVVSLIQERYPQGYWARYVE 267
              D   ++V   + ++P       ++
Sbjct: 578 PTKDL-EKLVRDFERKFPGSPMITDLK 603


>gi|254253148|ref|ZP_04946466.1| hypothetical protein BDAG_02400 [Burkholderia dolosa AUO158]
 gi|124895757|gb|EAY69637.1| hypothetical protein BDAG_02400 [Burkholderia dolosa AUO158]
          Length = 307

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 45/137 (32%), Gaps = 8/137 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
             T    + +    A    +  NF  A   F      +P +     +       QY+   
Sbjct: 179 EGTVQPGETDALSAAQQQFRNGNFKAAAASFRSFIAKYPQSPYQPTAQYWLGNAQYALRD 238

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y+ + +  +  +++YP+          +G         +   Q+A     +   ++V +Y
Sbjct: 239 YRGSTATWQAIVSKYPQHPRAADALVAIG------TNQLEQGQKAA--AKKTFEQVVSQY 290

Query: 170 TNSPYVKGARFYVTVGR 186
             S   + A+  +   +
Sbjct: 291 AGSNAAQTAQGKLETIK 307



 Score = 42.0 bits (98), Expect = 0.090,   Method: Composition-based stats.
 Identities = 14/109 (12%), Positives = 35/109 (32%), Gaps = 14/109 (12%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         + +Y  SPY   A++++       A   +          +Y  +   
Sbjct: 200 GNFKAAAASFRSFIAKYPQSPYQPTAQYWLGN-----AQYAL---------RDYRGSTAT 245

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +Q +++ Y     A +A+  +    +       A++    +  +Y    
Sbjct: 246 WQAIVSKYPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYAGSN 294



 Score = 39.3 bits (91), Expect = 0.52,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 25/66 (37%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +   +   + G + AA   F+  +A Y  + +   A   L  A  AL     +      I
Sbjct: 190 LSAAQQQFRNGNFKAAAASFRSFIAKYPQSPYQPTAQYWLGNAQYALRDYRGSTATWQAI 249

Query: 254 QERYPQ 259
             +YPQ
Sbjct: 250 VSKYPQ 255


>gi|194366889|ref|YP_002029499.1| tol-pal system protein YbgF [Stenotrophomonas maltophilia R551-3]
 gi|194349693|gb|ACF52816.1| tol-pal system protein YbgF [Stenotrophomonas maltophilia R551-3]
          Length = 272

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 46/137 (33%), Gaps = 8/137 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S+     +R  Y  A   LK   +  + + F    + +P    A  +L       Y+   
Sbjct: 138 SLAATGDERTTYNVAFDSLKAGKYDDSAQLFLSFLQLYPNGVYAPNALYWLGESYYATRN 197

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           +  A +   E +++YP           VG+S           +       Q +  +V +Y
Sbjct: 198 FPMAETQFRELLSRYPTHDKAAGGLLKVGLSQY--------GEGKVDQAQQTLETVVAQY 249

Query: 170 TNSPYVKGARFYVTVGR 186
             S   + A+  +   R
Sbjct: 250 PGSDAARTAQDRLQSIR 266



 Score = 45.5 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 43/115 (37%), Gaps = 14/115 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              Q     ++ Y N  Y   A +++              G  Y     +  A  +F+ +
Sbjct: 163 DSAQLFLSFLQLYPNGVYAPNALYWL--------------GESYYATRNFPMAETQFREL 208

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           L+ Y   + A   + ++  +      +D+A++ +  +  +YP    AR  +  ++
Sbjct: 209 LSRYPTHDKAAGGLLKVGLSQYGEGKVDQAQQTLETVVAQYPGSDAARTAQDRLQ 263


>gi|172059752|ref|YP_001807404.1| tol-pal system protein YbgF [Burkholderia ambifaria MC40-6]
 gi|171992269|gb|ACB63188.1| tol-pal system protein YbgF [Burkholderia ambifaria MC40-6]
          Length = 249

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 45/137 (32%), Gaps = 8/137 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
             T    + +    A    +  NF  A   F      +P +     +       QY+   
Sbjct: 121 EGTVQPGETDALSAAQQQFRNGNFKAAAASFRSFIAKYPQSPYQPTAQYWLGNAQYALRD 180

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y+ + +  +  +++YP+          +G         +   Q+A     +   ++V +Y
Sbjct: 181 YRGSTATWQAIVSKYPQHPRAADALVAIG------TNQLEQGQKAA--AKKTFEQVVSQY 232

Query: 170 TNSPYVKGARFYVTVGR 186
             S   + A+  +   +
Sbjct: 233 AGSNAAQTAQGKIESIK 249



 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/109 (12%), Positives = 35/109 (32%), Gaps = 14/109 (12%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         + +Y  SPY   A++++       A   +          +Y  +   
Sbjct: 142 GNFKAAAASFRSFIAKYPQSPYQPTAQYWLGN-----AQYAL---------RDYRGSTAT 187

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +Q +++ Y     A +A+  +    +       A++    +  +Y    
Sbjct: 188 WQAIVSKYPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYAGSN 236



 Score = 39.3 bits (91), Expect = 0.56,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 25/66 (37%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +   +   + G + AA   F+  +A Y  + +   A   L  A  AL     +      I
Sbjct: 132 LSAAQQQFRNGNFKAAAASFRSFIAKYPQSPYQPTAQYWLGNAQYALRDYRGSTATWQAI 191

Query: 254 QERYPQ 259
             +YPQ
Sbjct: 192 VSKYPQ 197


>gi|292490343|ref|YP_003525782.1| tol-pal system protein YbgF [Nitrosococcus halophilus Nc4]
 gi|291578938|gb|ADE13395.1| tol-pal system protein YbgF [Nitrosococcus halophilus Nc4]
          Length = 254

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 51/149 (34%), Gaps = 10/149 (6%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
             + +    +DS  D       Y+ A+  LKE  + +A   F Q  + +P +     +  
Sbjct: 112 PSEMTEAGTMDSAPDSGEPA--YQAALKLLKEGRYEEAMAAFRQFPQQYPESRYRPNAQY 169

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
                 Y    +  AA   +    QYPES  V       G++Y ++           +  
Sbjct: 170 WLGESYYMLRDFSAAAQAFQALAEQYPESAKVPDAMLKQGLAYYEL--------EQWEQA 221

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRN 187
              +  ++ RY  S   + A   +   + 
Sbjct: 222 KAQLQEVMARYPASTVSRLAEDRLEKMKR 250



 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 46/116 (39%), Gaps = 14/116 (12%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           +  +    +  ++Y  S Y   A++++              G  Y    ++ AA   FQ 
Sbjct: 145 EEAMAAFRQFPQQYPESRYRPNAQYWL--------------GESYYMLRDFSAAAQAFQA 190

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           +   Y ++    +AM +   AY  L   ++A+  +  +  RYP    +R  E  ++
Sbjct: 191 LAEQYPESAKVPDAMLKQGLAYYELEQWEQAKAQLQEVMARYPASTVSRLAEDRLE 246



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 56/149 (37%), Gaps = 29/149 (19%)

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
              A ++ L         G+Y++A +   ++  QYPES+      Y +G SY  +     
Sbjct: 128 GEPAYQAALKLL----KEGRYEEAMAAFRQFPQQYPESRYRPNAQYWLGESYYML----- 178

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
              R      Q    + E+Y  S  V  A     + +  LA  E+          ++  A
Sbjct: 179 ---RDFSAAAQAFQALAEQYPESAKVPDA-----MLKQGLAYYEL---------EQWEQA 221

Query: 210 IPRFQLVLANYSDAEH---AEEAMARLVE 235
             + Q V+A Y  +     AE+ + ++  
Sbjct: 222 KAQLQEVMARYPASTVSRLAEDRLEKMKR 250



 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 2/71 (2%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           LK G Y  A+  F+     Y ++ +   A   L E+Y  L     A +    + E+YP+ 
Sbjct: 139 LKEGRYEEAMAAFRQFPQQYPESRYRPNAQYWLGESYYMLRDFSAAAQAFQALAEQYPES 198

Query: 261 YWARYVETLVK 271
             A+  + ++K
Sbjct: 199 --AKVPDAMLK 207


>gi|115350729|ref|YP_772568.1| hypothetical protein Bamb_0675 [Burkholderia ambifaria AMMD]
 gi|115280717|gb|ABI86234.1| conserved hypothetical protein [Burkholderia ambifaria AMMD]
          Length = 249

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 45/137 (32%), Gaps = 8/137 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
             T    + +    A    +  NF  A   F      +P +     +       QY+   
Sbjct: 121 EGTVQPGETDALNAAQQQFRNGNFKAAAASFRSFIAKYPQSPYQPTAQYWLGNAQYALRD 180

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y+ + +  +  +++YP+          +G         +   Q+A     +   ++V +Y
Sbjct: 181 YRGSTATWQTVVSKYPQHPRAADALVAIG------TNQLEQGQKAA--AKKTFEQVVSQY 232

Query: 170 TNSPYVKGARFYVTVGR 186
             S   + A+  +   +
Sbjct: 233 AGSNAAQTAQGKIESIK 249



 Score = 43.6 bits (102), Expect = 0.028,   Method: Composition-based stats.
 Identities = 15/109 (13%), Positives = 35/109 (32%), Gaps = 14/109 (12%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         + +Y  SPY   A++++       A   +          +Y  +   
Sbjct: 142 GNFKAAAASFRSFIAKYPQSPYQPTAQYWLGN-----AQYAL---------RDYRGSTAT 187

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +Q V++ Y     A +A+  +    +       A++    +  +Y    
Sbjct: 188 WQTVVSKYPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYAGSN 236



 Score = 38.9 bits (90), Expect = 0.83,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 25/66 (37%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +   +   + G + AA   F+  +A Y  + +   A   L  A  AL     +      +
Sbjct: 132 LNAAQQQFRNGNFKAAAASFRSFIAKYPQSPYQPTAQYWLGNAQYALRDYRGSTATWQTV 191

Query: 254 QERYPQ 259
             +YPQ
Sbjct: 192 VSKYPQ 197


>gi|218264397|ref|ZP_03478254.1| hypothetical protein PRABACTJOHN_03950 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222035|gb|EEC94685.1| hypothetical protein PRABACTJOHN_03950 [Parabacteroides johnsonii
           DSM 18315]
          Length = 999

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 65/218 (29%), Gaps = 36/218 (16%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ-------YSAG 108
           Y    Y     + K +++S A   F    R +      +++    A          Y   
Sbjct: 504 YALAYYNLGYSYFKLRDYSAALNRF----RQYVDLESNQQAA-SLADAYNRIGDCLYQNR 558

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           ++  A           P     DY  Y  G             Q+  +  +  M R++  
Sbjct: 559 QFSLAEENYSRAAQLSPS--AGDYSIYQKGFLLGL--------QKDYRGKISAMDRLISE 608

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y  S YV  A                E GR Y+      +A   F+ ++  +  +  A +
Sbjct: 609 YPESQYVDDAL--------------FEKGRSYVLLENSSSAAQAFEKLIREFPQSSLARK 654

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
           A  +L   Y      ++A      +   YP    A+  
Sbjct: 655 AGIQLGLLYYNDNQPEKALTAYKQVISNYPGSEEAKIA 692



 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 95/258 (36%), Gaps = 52/258 (20%)

Query: 39  ERQSSRDVYLDSVTDVRY-QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
            + S+ D  +    + +Y    ++EK   ++  +N S A + F +  R+FP + +ARK+ 
Sbjct: 597 GKISAMDRLISEYPESQYVDDALFEKGRSYVLLENSSSAAQAFEKLIREFPQSSLARKAG 656

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNV------------------DYVYYL--V 137
           +    + Y+  + ++A +  ++ I+ YP S+                     Y  Y+  +
Sbjct: 657 IQLGLLYYNDNQPEKALTAYKQVISNYPGSEEAKIALQDLKSVYIDLNDINAYASYVNSI 716

Query: 138 G------------MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           G            ++Y    +             + +   ++ +    +   A FY+   
Sbjct: 717 GGNIRLEVGEQDSLTYIAAEKLFMR--GDNDGARRSLVNYLQTFPEGAFSSNANFYLGSI 774

Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
               A KE +             A+ RF+ V+A+  D +  EE++AR  E          
Sbjct: 775 --AFAKKEFD------------EAVQRFKSVIAS-GDTKFLEESVARTAEIEYLGNDYPA 819

Query: 246 AREVVSLIQ--ERYPQGY 261
           A E    +Q     P+  
Sbjct: 820 ALESFKRLQIVAENPENK 837



 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 77/234 (32%), Gaps = 36/234 (15%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-KSLLMSAFVQYSAGKYQQAASLGE 118
           +++           + A   F++  +   +   AR  +        Y  G+Y+ A S   
Sbjct: 431 LFQLGTQAFANVKLNDAVSLFSRAIQLGSYNMEARNDAYFWRGESYYRMGEYENAISDYR 490

Query: 119 EYITQYPESKNVDY---VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
            Y+      +N D     YY +G SY ++        R     L    + V+  +N    
Sbjct: 491 TYLN-NTRQRNTDMYALAYYNLGYSYFKL--------RDYSAALNRFRQYVDLESNQQAA 541

Query: 176 --KGARFYVTVG-------------RNQLAAKEVEIGRY--YLK------RGEYVAAIPR 212
               A   +                 ++ A      G Y  Y K      + +Y   I  
Sbjct: 542 SLADAYNRIGDCLYQNRQFSLAEENYSRAAQLSPSAGDYSIYQKGFLLGLQKDYRGKISA 601

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
              +++ Y ++++ ++A+     +YV L     A +    +   +PQ   AR  
Sbjct: 602 MDRLISEYPESQYVDDALFEKGRSYVLLENSSSAAQAFEKLIREFPQSSLARKA 655



 Score = 53.6 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/273 (13%), Positives = 94/273 (34%), Gaps = 57/273 (20%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
             I +C +VG      +  Y     D      ++ +       +N++   +      +  
Sbjct: 4   ILIPLCIVVGSHVAYGQRSYQFDAPDR-----LFVEGKELFSLKNYAGCIDKLEAYKQHS 58

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM--- 144
             A + +++  M  +  Y  G+   A  L ++Y+ +YP S++ D + Y++G  + +    
Sbjct: 59  TDADLIQEADYMLVYAAYEQGR-PNADELLKDYLEEYPASRHSDEIGYMIGSVHFERGEY 117

Query: 145 -----------IRDVPYDQRAT---------------KLMLQYMSRIVERYTNSPYVKGA 178
                      I  +  +Q+                 +    Y +RI +      Y + +
Sbjct: 118 EKAIFWFNEADIDMLSPEQQEAYSFRLAYSLLQTGEMEKARGYFARIEQI--GDKYKEAS 175

Query: 179 RFYVTVGRNQLAAK--------------------EVEIGRYYLKRGEYVAAIPRFQLVLA 218
            +YV      +                       +  I + Y  + +Y   +   + +L+
Sbjct: 176 TYYVAYIDYAMGNYNNALIEFSRLKESPKYREQSQYYIAQIYFIQSKYEKVVKEGEELLS 235

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
            Y  +++  E    + ++Y  L    +A +++S
Sbjct: 236 LYPGSKNNSEMFRIVGDSYYHLGDQGKAIQMLS 268



 Score = 49.3 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 74/201 (36%), Gaps = 31/201 (15%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           ++ + D   +   Y  A +     N++ A   F++            +S    A + +  
Sbjct: 164 IEQIGDKYKEASTYYVAYIDYAMGNYNNALIEFSRLKES---PKYREQSQYYIAQIYFIQ 220

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            KY++    GEE ++ YP SKN   ++ +VG SY  +              +Q +     
Sbjct: 221 SKYEKVVKEGEELLSLYPGSKNNSEMFRIVGDSYYHLGDQ--------GKAIQML----- 267

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
               S YV      +          ++ I G  Y  +G Y +A+      +    + E  
Sbjct: 268 ----SKYVSSTENPL--------RSDLYILGVCYFNKGNYSSAVNALSRTVR--QNDELT 313

Query: 227 EEAMARLVEAYVALALMDEAR 247
           + A   L ++Y+ L   + AR
Sbjct: 314 QNAYLYLGQSYLKLGDKNNAR 334



 Score = 43.2 bits (101), Expect = 0.038,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 50/170 (29%), Gaps = 38/170 (22%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S T+   + ++Y   V +  + N+S A    ++  R      + + + L         G 
Sbjct: 272 SSTENPLRSDLYILGVCYFNKGNYSSAVNALSRTVRQN--DELTQNAYLYLGQSYLKLGD 329

Query: 110 Y--------QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
                      A S  ++ I         +   Y    +YA +I +  +        +  
Sbjct: 330 KNNARMAFEAAATSSFDKQIK--------EVAMY----NYALLIHETAF--TGFGESVTI 375

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
               +  + NS Y      Y+                 YL    Y AA+ 
Sbjct: 376 FEDFLNDFPNSQYADKVNDYLVEV--------------YLTTKNYEAALK 411


>gi|171321508|ref|ZP_02910449.1| tol-pal system protein YbgF [Burkholderia ambifaria MEX-5]
 gi|171093216|gb|EDT38423.1| tol-pal system protein YbgF [Burkholderia ambifaria MEX-5]
          Length = 249

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 45/137 (32%), Gaps = 8/137 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
             T    + +    A    +  NF  A   F      +P +     +       QY+   
Sbjct: 121 EGTVQPGETDALSAAQQQFRNGNFKAAAASFRGFIAKYPQSPYQPTAQYWLGNAQYALRD 180

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y+ + +  +  +++YP+          +G         +   Q+A     +   ++V +Y
Sbjct: 181 YRGSTATWQAIVSKYPQHPRAADALVAIG------TNQLEQGQKAA--AKKTFEQVVSQY 232

Query: 170 TNSPYVKGARFYVTVGR 186
             S   + A+  +   +
Sbjct: 233 AGSNAAQTAQGKIESIK 249



 Score = 41.6 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 14/109 (12%), Positives = 35/109 (32%), Gaps = 14/109 (12%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         + +Y  SPY   A++++       A   +          +Y  +   
Sbjct: 142 GNFKAAAASFRGFIAKYPQSPYQPTAQYWLGN-----AQYAL---------RDYRGSTAT 187

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +Q +++ Y     A +A+  +    +       A++    +  +Y    
Sbjct: 188 WQAIVSKYPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYAGSN 236



 Score = 39.3 bits (91), Expect = 0.55,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 25/66 (37%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +   +   + G + AA   F+  +A Y  + +   A   L  A  AL     +      I
Sbjct: 132 LSAAQQQFRNGNFKAAAASFRGFIAKYPQSPYQPTAQYWLGNAQYALRDYRGSTATWQAI 191

Query: 254 QERYPQ 259
             +YPQ
Sbjct: 192 VSKYPQ 197


>gi|166712981|ref|ZP_02244188.1| hypothetical protein Xoryp_16440 [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 272

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 43/130 (33%), Gaps = 8/130 (6%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           +R  Y  A   LK   +  A + F      +P       +L       Y+   +Q A + 
Sbjct: 145 ERTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQ 204

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
             + +++YP           +G+S     ++            Q +  +  +Y  S   +
Sbjct: 205 FRDLVSRYPTHDKAAGGLLKLGLSQYGEGKN--------NEAQQTLQHVASQYPGSDAAR 256

Query: 177 GARFYVTVGR 186
            A+  +   R
Sbjct: 257 VAQERLQSIR 266



 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 42/115 (36%), Gaps = 14/115 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              Q     +E Y N  Y   A +++              G  Y     +  A  +F+ +
Sbjct: 163 DASQLFLSFLELYPNGVYTPNALYWL--------------GESYYATRNFQLAEAQFRDL 208

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           ++ Y   + A   + +L  +       +EA++ +  +  +YP    AR  +  ++
Sbjct: 209 VSRYPTHDKAAGGLLKLGLSQYGEGKNNEAQQTLQHVASQYPGSDAARVAQERLQ 263



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 23/58 (39%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           LK G+Y  A   F   L  Y +  +   A+  L E+Y A      A      +  RYP
Sbjct: 156 LKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYP 213


>gi|237756217|ref|ZP_04584781.1| Tetratricopeptide repeat family protein [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237691627|gb|EEP60671.1| Tetratricopeptide repeat family protein [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 964

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 44/221 (19%), Positives = 88/221 (39%), Gaps = 31/221 (14%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKY 110
           D+  ++  Y  A  F    +F +A + F++    +        RK+LL  A   Y+ G+ 
Sbjct: 589 DLIAKKAYYLYAYTFFSSGDFVRASQEFSKFLEKYKNDDDIYTRKALLRLADSYYNLGER 648

Query: 111 QQAASLGEEYITQYPESKN-VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
             A ++ +++IT+Y  +K+ +D  Y L+ +       DV             +   + +Y
Sbjct: 649 DLAVNIYKDFITKYSGTKDSIDAAYNLIILESKGSSEDVE----------SMIKSFLTKY 698

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
              P     +  +                 Y  +G+   AI  +Q V A   +++ +  A
Sbjct: 699 PKYPLANILKIQLAEI--------------YQNKGKIENAIKIYQEVAAV--NSKESALA 742

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
             +L E+Y  L  +D+A++V  LI          + +  L+
Sbjct: 743 TYKLAESYYKLNQLDKAKQV--LIDYLNTNNEEYKLLSKLL 781



 Score = 44.3 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 54/155 (34%), Gaps = 15/155 (9%)

Query: 40  RQSSRDVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
           +Q+  D  +    +++   +V ++ A + L++ ++ KA  YF +     P      +   
Sbjct: 788 KQNDLDNSIKIYEELKENDDVKFKLAKILLQKGDYDKALTYFKELLEKHP--EKVNEISF 845

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
                 Y     + A S  E          +    YYL+GM Y +               
Sbjct: 846 YIGKTYYLMNDKKDAVSYLENGTKS-SNYNDAAVSYYLLGMIYNK---------ENPNKA 895

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQL-AAK 192
           L Y    +  Y +S  +  A+  +   +  L A K
Sbjct: 896 LNYFLNGIYLYPSSKDIT-AKSRIEAAKILLKAEK 929



 Score = 42.4 bits (99), Expect = 0.064,   Method: Composition-based stats.
 Identities = 17/49 (34%), Positives = 27/49 (55%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
           +LL  A   Y+ G    A S  E++I +Y + KN+ Y YYL+G+    +
Sbjct: 139 ALLSDAIDYYNKGDLLFAESNLEKFIEKYKDHKNLFYAYYLLGVVKYNL 187


>gi|255531080|ref|YP_003091452.1| tetratricopeptide domain-containing protein [Pedobacter heparinus
           DSM 2366]
 gi|255344064|gb|ACU03390.1| Tetratricopeptide domain protein [Pedobacter heparinus DSM 2366]
          Length = 1005

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 66/211 (31%), Gaps = 33/211 (15%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK-----SLLMSAFVQYSAGKYQQAAS 115
           Y  A    +++ + KA  YF      F       +     + +  A   +    Y  A  
Sbjct: 518 YALAYSAFEDEKYGKAALYFE----RFLKGNDKDQKTVNDATIRLADSYFVNKSYGNALV 573

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
                I      +  DY  +  GM     I+ +   Q   K  +  M  +++++ NS Y 
Sbjct: 574 NYNRIIDSKASGE--DYALFQRGM-----IQGLDN-QNDAK--INTMQNLLKQFPNSNYA 623

Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
             A F +                 Y  +GE   +      +++ Y ++ +   A+  +  
Sbjct: 624 DDAGFEMAYT--------------YFNKGELDKSKSDLISLVSQYPNSSYVPRALVTIGL 669

Query: 236 AYVALALMDEAREVVSLIQERYPQGYWARYV 266
                   D A E    +   YP    A+  
Sbjct: 670 VQYNQDQDDAALESFKKVIRDYPSTEEAKQA 700



 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 72/232 (31%), Gaps = 42/232 (18%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++++ ++   +              + FP +  A  +    A+  ++ G+  ++ S    
Sbjct: 590 LFQRGMIQGLDNQNDAKINTMQNLLKQFPNSNYADDAGFEMAYTYFNKGELDKSKSDLIS 649

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            ++QYP S  V      +G+      +D           L+   +++  Y ++   K A 
Sbjct: 650 LVSQYPNSSYVPRALVTIGLVQYNQDQD--------DAALESFKKVIRDYPSTEEAKQAL 701

Query: 180 FYVTVGRNQLAAKEVEI--------GRY----------------YLKRGEYVA--AIPRF 213
             +          +  I        G Y                YLK     A  AI  +
Sbjct: 702 ESIKNIYVDKGDSQGFINYAGTTPLGNYSNAEQDNILFQGANNLYLKGDAKGAFEAINAY 761

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
                 +  A H +EA     E+ V L   +EA     +    Y    W   
Sbjct: 762 ---FDKFPKAIHDKEAKFIRAESLVKLGRPNEA-----VPDYEYILNDWTSD 805



 Score = 45.1 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 71/217 (32%), Gaps = 51/217 (23%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRD--------FPFAGVARKSLLMSAFVQYSAGKYQQ 112
           Y KA    + + F +A  +F              + FA  A       A+  +   KY +
Sbjct: 479 YWKAEACYELRKFGEAVRHFETFLDMPGASKTGVYNFANYA------LAYSAFEDEKYGK 532

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           AA   E ++                             DQ+        ++     + N 
Sbjct: 533 AALYFERFLK------------------------GNDKDQKTVNDATIRLAD--SYFVNK 566

Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG-------EYVAAIPRFQLVLANYSDAEH 225
            Y      Y  +  ++ + ++  +     +RG       +  A I   Q +L  + ++ +
Sbjct: 567 SYGNALVNYNRIIDSKASGEDYAL----FQRGMIQGLDNQNDAKINTMQNLLKQFPNSNY 622

Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           A++A   +   Y     +D+++  +  +  +YP   +
Sbjct: 623 ADDAGFEMAYTYFNKGELDKSKSDLISLVSQYPNSSY 659



 Score = 42.8 bits (100), Expect = 0.049,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 50/157 (31%), Gaps = 30/157 (19%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K  L I   +A  F  G+ + S       +          Y+  +  L  + +  A +
Sbjct: 1   MSKKYLFIPLLLAGGFTAGYAQTSVLVNLNKN----------YQTGLELLDNEKYVAAAQ 50

Query: 79  YFNQCS--RDFPFAGVARKSLLMS---------AFVQYSAGKYQQAASLGEEYITQYPES 127
            F      R  P       + L           A      G    A SL + +I  YP +
Sbjct: 51  QFRLVEQLRQKPGTQQESNAELSMLKENAKFYAAVCALELGNSD-AESLFQNFIKDYPLN 109

Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
            N    Y+ VG SY          Q+  +  L++  +
Sbjct: 110 PNTKLAYFHVGKSYFA--------QKNYQKALEWFEK 138


>gi|198282219|ref|YP_002218540.1| tol-pal system protein YbgF [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218666817|ref|YP_002424584.1| hypothetical protein AFE_0070 [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|198246740|gb|ACH82333.1| tol-pal system protein YbgF [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218519030|gb|ACK79616.1| conserved hypothetical protein [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 272

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 15/135 (11%)

Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
           +G +  Q   D+   Q      +  +   +++Y  S  V  A +++   +  L   +   
Sbjct: 147 LGQADYQRAFDLLR-QGKYGSAVTGLQGFIQKYPQSSLVPDAYYWLGQAQYVLGQND--- 202

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
                      AA+    +V A +S +  A EAM R+ E Y A+    +AR V+S I  +
Sbjct: 203 -----------AALKSLHVVEAQFSQSSKAPEAMLRMAEIYQAIGQSGKARTVLSKIISQ 251

Query: 257 YPQGYWARYVETLVK 271
           YP    A+  E  ++
Sbjct: 252 YPSTPSAQKAEAQLQ 266



 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 48/135 (35%), Gaps = 22/135 (16%)

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           ++    AF     GKY  A +  + +I +YP+S  V   YY +G +   + ++       
Sbjct: 149 QADYQRAFDLLRQGKYGSAVTGLQGFIQKYPQSSLVPDAYYWLGQAQYVLGQN------- 201

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
               L+ +  +  +++ S     A   +                 Y   G+   A     
Sbjct: 202 -DAALKSLHVVEAQFSQSSKAPEAMLRMAEI--------------YQAIGQSGKARTVLS 246

Query: 215 LVLANYSDAEHAEEA 229
            +++ Y     A++A
Sbjct: 247 KIISQYPSTPSAQKA 261



 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/125 (13%), Positives = 41/125 (32%), Gaps = 8/125 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y++A   L++  +  A        + +P + +   +       QY  G+   A       
Sbjct: 152 YQRAFDLLRQGKYGSAVTGLQGFIQKYPQSSLVPDAYYWLGQAQYVLGQNDAALKSLHVV 211

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
             Q+ +S         +   Y  +          +      +S+I+ +Y ++P  + A  
Sbjct: 212 EAQFSQSSKAPEAMLRMAEIYQAI--------GQSGKARTVLSKIISQYPSTPSAQKAEA 263

Query: 181 YVTVG 185
            +   
Sbjct: 264 QLQAL 268


>gi|325981316|ref|YP_004293718.1| tol-pal system protein YbgF [Nitrosomonas sp. AL212]
 gi|325530835|gb|ADZ25556.1| tol-pal system protein YbgF [Nitrosomonas sp. AL212]
          Length = 300

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/146 (15%), Positives = 53/146 (36%), Gaps = 8/146 (5%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
            S      +       +   Y++A    K   ++     F     ++P + +A  +    
Sbjct: 163 DSGSLSVNELAPPGPAENAAYKEAYDSFKNGEYANTIAQFENFLENYPQSTLAPGAAYWI 222

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
              +Y+   YQ A    ++ I++YP+S  V      +  S  +M      D+ A +  L+
Sbjct: 223 GNARYALRDYQLAIDAQKKLISKYPDSNKVPDALLNIATSQFEMG-----DRNAGRKTLE 277

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGR 186
               ++  + +S     A+  +   +
Sbjct: 278 N---LLLSHPHSEAAGKAKQRLANIK 300



 Score = 45.5 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 36/103 (34%), Gaps = 14/103 (13%)

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
           +      +E Y  S    GA +++   R  L               +Y  AI   + +++
Sbjct: 199 IAQFENFLENYPQSTLAPGAAYWIGNARYAL--------------RDYQLAIDAQKKLIS 244

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            Y D+    +A+  +  +   +   +  R+ +  +   +P   
Sbjct: 245 KYPDSNKVPDALLNIATSQFEMGDRNAGRKTLENLLLSHPHSE 287



 Score = 42.8 bits (100), Expect = 0.049,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 24/61 (39%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            K GEY   I +F+  L NY  +  A  A   +  A  AL     A +    +  +YP  
Sbjct: 190 FKNGEYANTIAQFENFLENYPQSTLAPGAAYWIGNARYALRDYQLAIDAQKKLISKYPDS 249

Query: 261 Y 261
            
Sbjct: 250 N 250


>gi|218778517|ref|YP_002429835.1| hypothetical protein Dalk_0662 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218759901|gb|ACL02367.1| TPR repeat-containing protein [Desulfatibacillum alkenivorans
           AK-01]
          Length = 876

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/287 (12%), Positives = 86/287 (29%), Gaps = 59/287 (20%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
              G +      +  ++       ++++ KAV   K   +  A   F+   + +P +   
Sbjct: 221 ATAGHDFSYDGPLLSEANGSGTPDQDLFSKAVEEYKTGQWQDAIRDFSILEQSYPLSEKL 280

Query: 94  RKSLLMSAFVQY------SAGKYQQAASLGEEYITQYPESKNVDYVY-YLV--------- 137
             +  ++A   +         ++   A      + Q+P S+       YLV         
Sbjct: 281 EPAAFLTARAYHGLYGANLTKRFVDVAEKYRRAVKQFPNSRFAPQAIVYLVQMYKKVGNY 340

Query: 138 --GMSYAQMIRDVPYDQRAT-----------------KLMLQYMSRIVERYTNSPYVK-- 176
               +YA ++ D   D+  +                  L L     ++  Y +S YV+  
Sbjct: 341 PEAAAYADLVWDKYKDRAMSPDFMLLRGQALLANGQKDLALGVFDMLLGYYPDSEYVEAT 400

Query: 177 ---------------GARFYVTVG--RNQLAAKEV-----EIGRYYLKRGEYVAAIPRFQ 214
                           +   +     ++  A          +G  Y +      A   F 
Sbjct: 401 LLEKAKVMHEERAYKKSLEMLQEIEKKDPQARFIYPDFSRYMGENYYQLKANPKARELFF 460

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             +  + D    +    ++ +++    + D+A  +  ++   +P   
Sbjct: 461 QTVNTFPDTPDKDILFTKIGDSFKDQGMQDKAAMIYKMVVSNFPGSD 507



 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 78/259 (30%), Gaps = 46/259 (17%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM--SAF 102
           D   D V      + ++  A  + +    S A     + SR +      + + +M   A 
Sbjct: 620 DKVRDVVPFEEMPQLMFIVANAYRETGMCSWALTQLEKVSRFY---DDPKPADIMFIMAD 676

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
                G+ + A  L E ++ QYP        Y+ +         D+  ++  T   +Q +
Sbjct: 677 CNKKVGEIENARRLFETFVLQYPGEPRFVEAYHQLA--------DIYLERGETDPAIQAL 728

Query: 163 SRIVERYTNSPYVKGARFYVTVGR----------------------------NQLAAKEV 194
              +     + Y           +                            N  AA ++
Sbjct: 729 RVCLR--PGTQYSDDFNLMFQYAKLLKNKGEYQDAVEAFNKAVDLVMKSDPPNTQAAVDI 786

Query: 195 E--IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           +  IG  Y +      A+  F+  L              +L   Y +L     A E++  
Sbjct: 787 QEGIGDLYEEMELTSKAVKHFEQALELSGGPNSYPALQFKLARCYASLGEAARAMEILES 846

Query: 253 IQERYPQGYWARYVETLVK 271
           +     +  WA+  +  ++
Sbjct: 847 LARSG-ENVWAKAAKAKLE 864



 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 27/215 (12%), Positives = 64/215 (29%), Gaps = 33/215 (15%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGV------ARKSLLMSAFV-QYSAGKYQQAASL 116
           A L   E+ +  +           PF  +      A  + L + F   +    +      
Sbjct: 559 ARLAHDEKRYEDSVSILLGLLARHPFTKLHDDVREALLASLEAIFTRDHREKDFAHIVEY 618

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            ++     P  + +  + ++V  +Y         +       L  + ++   Y + P   
Sbjct: 619 YDKVRDVVP-FEEMPQLMFIVANAY--------RETGMCSWALTQLEKVSRFY-DDPKPA 668

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
              F +     ++   E+E  R              F+  +  Y       EA  +L + 
Sbjct: 669 DIMFIMADCNKKVG--EIENAR------------RLFETFVLQYPGEPRFVEAYHQLADI 714

Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           Y+     D A + + +     P   ++     + +
Sbjct: 715 YLERGETDPAIQALRVCLR--PGTQYSDDFNLMFQ 747


>gi|307728549|ref|YP_003905773.1| tol-pal system protein YbgF [Burkholderia sp. CCGE1003]
 gi|307583084|gb|ADN56482.1| tol-pal system protein YbgF [Burkholderia sp. CCGE1003]
          Length = 249

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 48/132 (36%), Gaps = 8/132 (6%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
             + + +  A    +  +F  A   F      FP +     +       QY+   Y+ + 
Sbjct: 126 PGETDAFNAASQQFRNGDFKSAAASFRSFIAKFPNSPYQPTAQYWLGNAQYALRDYKGST 185

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
           +  +  +  YP+         L+ ++  Q    +   Q+A     + + +IV +Y  S  
Sbjct: 186 ATWQGVVKNYPQHPRAPEA--LLAIANNQ----IEQGQKAA--AKKTLEQIVAQYGGSNV 237

Query: 175 VKGARFYVTVGR 186
            + A+  ++  +
Sbjct: 238 AQSAQSKLSQIK 249



 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 37/109 (33%), Gaps = 14/109 (12%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         + ++ NSPY   A++++       A   +          +Y  +   
Sbjct: 142 GDFKSAAASFRSFIAKFPNSPYQPTAQYWLGN-----AQYAL---------RDYKGSTAT 187

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +Q V+ NY     A EA+  +    +       A++ +  I  +Y    
Sbjct: 188 WQGVVKNYPQHPRAPEALLAIANNQIEQGQKAAAKKTLEQIVAQYGGSN 236



 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 25/59 (42%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            + G++ +A   F+  +A + ++ +   A   L  A  AL     +      + + YPQ
Sbjct: 139 FRNGDFKSAAASFRSFIAKFPNSPYQPTAQYWLGNAQYALRDYKGSTATWQGVVKNYPQ 197


>gi|189426318|ref|YP_001953495.1| tol-pal system protein YbgF [Geobacter lovleyi SZ]
 gi|189422577|gb|ACD96975.1| tol-pal system protein YbgF [Geobacter lovleyi SZ]
          Length = 248

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 42/146 (28%), Gaps = 10/146 (6%)

Query: 39  ERQSSRDVYLDSVTDVRY--QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
                  V  D V   R       Y KA       NF+ A + F    ++ P +     +
Sbjct: 100 ATSKVEVVNPDPVPKGRDAGPPPAYVKAFGLYSTNNFATAIQAFELFIKELPASEYVPNA 159

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
                   YS+     A    ++ +  +P           +G SY          Q+   
Sbjct: 160 YYWIGECYYSSSDLPNAHVAFQKVVDGWPRHSKAADALLKIGYSYLA--------QKQQD 211

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYV 182
                  R++  Y  SP    AR  +
Sbjct: 212 KAKSSFERLIRSYPGSPAAVKARERL 237



 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 45/136 (33%), Gaps = 22/136 (16%)

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           AF  YS   +  A    E +I + P S+ V   YY +G  Y                   
Sbjct: 127 AFGLYSTNNFATAIQAFELFIKELPASEYVPNAYYWIGECYYSSSDLPN--------AHV 178

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
              ++V+ +        A   +                 YL + +   A   F+ ++ +Y
Sbjct: 179 AFQKVVDGWPRHSKAADALLKIGYS--------------YLAQKQQDKAKSSFERLIRSY 224

Query: 221 SDAEHAEEAMARLVEA 236
             +  A +A  RL+ +
Sbjct: 225 PGSPAAVKARERLMSS 240



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 37/104 (35%), Gaps = 14/104 (13%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
            +Q     ++    S YV  A +++                YY       A +  FQ V+
Sbjct: 139 AIQAFELFIKELPASEYVPNAYYWIGEC-------------YYSSSDLPNAHVA-FQKVV 184

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             +     A +A+ ++  +Y+A    D+A+     +   YP   
Sbjct: 185 DGWPRHSKAADALLKIGYSYLAQKQQDKAKSSFERLIRSYPGSP 228



 Score = 42.4 bits (99), Expect = 0.063,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 29/104 (27%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
            F +          Q+      +           Y     +    +   A+  F +    
Sbjct: 127 AFGLYSTNNFATAIQAFELFIKELPASEYVPNAYYWIGECYYSSSDLPNAHVAFQKVVDG 186

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           +P    A  +LL   +   +  +  +A S  E  I  YP S   
Sbjct: 187 WPRHSKAADALLKIGYSYLAQKQQDKAKSSFERLIRSYPGSPAA 230


>gi|265754620|ref|ZP_06089672.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|263234734|gb|EEZ20302.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 967

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 72/222 (32%), Gaps = 46/222 (20%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D          +YE+   F++ ++ + A   FN   + FP + VAR++      + Y   
Sbjct: 574 DYPESQYMDDALYEQGRAFVQMEDNANAIARFNILVKKFPESSVARRAANEIGLLYYQDD 633

Query: 109 KYQQAASLGEEYITQYPESKNV------------------DYVYYLVGMSYAQMIRDVPY 150
           KY +A    ++ I  YP S+                    +Y  +   +           
Sbjct: 634 KYPEAIQAYKQVIASYPGSEEARLAQRDLKSIYIDLNKVDEYANFASTIPGGANFDVNER 693

Query: 151 D------------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           D            +          +R ++ +    +   A +Y+ +              
Sbjct: 694 DSLTYVAAERVYMRGEVTEARNSFTRYLQTFPEGAFSLNANYYIGLID------------ 741

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE-AYVA 239
               +  Y +A      VL  Y + +++E+AM    E AY A
Sbjct: 742 --YNQKAYESAARHLDKVLE-YPNNKYSEDAMLMGAEMAYTA 780



 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 74/214 (34%), Gaps = 26/214 (12%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLG 117
           +Y     + K++N+  A  +F +          A ++          +   +++QA    
Sbjct: 474 LYNLGYTYFKQKNYGNAGTWFTRFVDRGSANERAMQADAYNRIGDCNFYDRRFEQARQDY 533

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
              +   P     DY  Y         +R +  D       +Q ++R++  Y  S Y+  
Sbjct: 534 ARAVEIDPS--LGDYSLYQEA-----FVRGLQRD---YNGKVQTLNRLISDYPESQYMDD 583

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           A                E GR +++  +   AI RF +++  + ++  A  A   +   Y
Sbjct: 584 AL--------------YEQGRAFVQMEDNANAIARFNILVKKFPESSVARRAANEIGLLY 629

Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
                  EA +    +   YP    AR  +  +K
Sbjct: 630 YQDDKYPEAIQAYKQVIASYPGSEEARLAQRDLK 663



 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 76/233 (32%), Gaps = 37/233 (15%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y++A +   +++++   +  N+   D+P +     +L               A +    
Sbjct: 548 LYQEAFVRGLQRDYNGKVQTLNRLISDYPESQYMDDALYEQGRAFVQMEDNANAIARFNI 607

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            + ++PES         +G+ Y Q  +            +Q   +++  Y  S   + A+
Sbjct: 608 LVKKFPESSVARRAANEIGLLYYQDDKYP--------EAIQAYKQVIASYPGSEEARLAQ 659

Query: 180 FYVTVGRNQL----------------AAKEV-------EIG--RYYLKRGEYVAAIPRFQ 214
             +      L                A  +V        +   R Y+ RGE   A   F 
Sbjct: 660 RDLKSIYIDLNKVDEYANFASTIPGGANFDVNERDSLTYVAAERVYM-RGEVTEARNSFT 718

Query: 215 LVLANYSDAEHAEEAMARLVEA-YVALALMDEAREVVSLIQERYPQGYWARYV 266
             L  + +   +  A   +    Y   A    AR +  +++  YP   ++   
Sbjct: 719 RYLQTFPEGAFSLNANYYIGLIDYNQKAYESAARHLDKVLE--YPNNKYSEDA 769



 Score = 40.1 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 75/248 (30%), Gaps = 52/248 (20%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +  L +   +  C L G  +Q +           R  RE   K    +         E
Sbjct: 1   MKRKTLLMAALMGGCSLQGMAQQITPKDVAGDKEYNRVCREYELKGGDSM---------E 51

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +P +    + L + A   +  GKY++A +L                      
Sbjct: 52  LLQAYLDKYPDSRHKNRVLSLIASAYFMEGKYKEAIALFRS------------------- 92

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL------AAK 192
               + + D   D  A +L   Y+            ++ A  + T+ +         A  
Sbjct: 93  -CDLEALPDKERDDCAMRLATSYLKE--------DNLREAAVWFTLLKEVSPLYQDDAVY 143

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM--ARLVEAYVALALMDEAREVV 250
            +    Y  KR  Y  A+  FQ +  +         A+    + E Y+      +AR V 
Sbjct: 144 NLAYIDYVEKR--YDKALKSFQSLQND-----AVYAALVPYYIGEIYLVKGNYQQARTVA 196

Query: 251 SLIQERYP 258
               E+YP
Sbjct: 197 KAYLEQYP 204



 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 29/59 (49%), Gaps = 1/59 (1%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y   ++   ++ +  A  + ++    +P    +  ++LM A + Y+A  Y++A  + ++
Sbjct: 735 YYIGLIDYNQKAYESAARHLDKVLE-YPNNKYSEDAMLMGAEMAYTAKDYEKALHIYKQ 792



 Score = 36.2 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 20/153 (13%), Positives = 45/153 (29%), Gaps = 24/153 (15%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +YE  + +     +SKA     + +       +++ + L       +  +  +A    E+
Sbjct: 248 LYELGMSYYYTGVYSKAVATLGEMASVH--DALSQNAYLHMGLAYLNLKERNRARMAFEQ 305

Query: 120 YITQYPESKNV-DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
               +     V +   Y   +   +               +    R +  + NSPY +  
Sbjct: 306 -AANFSFDPKVKEQALYNYALCIHETSYS------PFAESVTVFERFLNEFPNSPYTERV 358

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
             Y+                 Y+    Y AA+ 
Sbjct: 359 NDYLIEV--------------YMNTRSYEAALK 377


>gi|53715697|ref|YP_101689.1| hypothetical protein BF4417 [Bacteroides fragilis YCH46]
 gi|52218562|dbj|BAD51155.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
          Length = 1002

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/206 (19%), Positives = 75/206 (36%), Gaps = 31/206 (15%)

Query: 44  RDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSR-DFPFAGVA--RKSLLM 99
           + + L+   +     + Y +    +L  +NF +A  Y++Q    + P    +  + +L+ 
Sbjct: 533 KYISLEKGENKTALADAYNRIGDCYLDVRNFDEAKHYYSQAEAMNTPSGDYSFYQLALVS 592

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
                     Y    +L      +YP S       Y  G SY  M  +        +  +
Sbjct: 593 G-----LQKDYSGKITLLNRLAGKYPASPYAISALYEKGRSYVLMDNN--------QQAI 639

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
                ++ +Y  SP  + A                EIG  Y +  +Y  AI  ++ V+  
Sbjct: 640 ASFKELLAKYPESPVSRKAAA--------------EIGLLYYQNEDYDQAINAYKQVVQK 685

Query: 220 YSDAEHAEEAMARLVEAYVALALMDE 245
           Y  ++ A  AM  L   YV +  +DE
Sbjct: 686 YPGSDEARLAMRDLKSIYVDMNRIDE 711



 Score = 51.7 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/277 (13%), Positives = 77/277 (27%), Gaps = 60/277 (21%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K    +  ++A C  V  + Q+S  +             +Y++      ++N++ A  
Sbjct: 1   MKKKISRLICAVACCVPVALQAQTSEKI--------TSPVNLYKEGKELFLQKNYAAAMP 52

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                 R      +  ++  M     Y     + A +    Y+  YP++ + + +Y L+ 
Sbjct: 53  PLRTFVRQKADVNLKEEAEYMLVCSAYELKD-RNAIAQLRNYLDTYPDTPHANRIYALIA 111

Query: 139 MSYAQM-----------------IRDVPYDQ------------RATKLMLQYMSRIVERY 169
            +Y                    + +   D                K    +   +    
Sbjct: 112 SAYFYQGNYDEALALFNSSRLDLLGNEERDDMTYQLATCYLKVGNVKEAAIWFETLKASS 171

Query: 170 TNSPYVKGARFYVTVGRNQLAAKE--------------------VEIGRYYLKRGEYVAA 209
               Y     +Y++  R      +                      I   Y  +  Y  A
Sbjct: 172 P--KYANDCSYYISYIRYTQKRYDEALKGFLPLQDDVKYKALVPYYIAEIYAVKKNYDKA 229

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
               Q  L+ Y   EH  E    L +AY       +A
Sbjct: 230 QIVAQNYLSAYPQNEHVAEMYRILGDAYYHFGDYHKA 266



 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 72/214 (33%), Gaps = 28/214 (13%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           Y    +   ++++++A  +F +     +      +A  +             + +A    
Sbjct: 512 YNLGYIAFHQKDYTQAQNWFRKYISLEKGENKTALA-DAYNRIGDCYLDVRNFDEAKHYY 570

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
            +       + + DY +Y + +                   +  ++R+  +Y  SPY   
Sbjct: 571 SQAEAMN--TPSGDYSFYQLALVSGLQKDYSGK--------ITLLNRLAGKYPASPYAIS 620

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           A                E GR Y+       AI  F+ +LA Y ++  + +A A +   Y
Sbjct: 621 AL--------------YEKGRSYVLMDNNQQAIASFKELLAKYPESPVSRKAAAEIGLLY 666

Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
                 D+A      + ++YP    AR     +K
Sbjct: 667 YQNEDYDQAINAYKQVVQKYPGSDEARLAMRDLK 700



 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 29/234 (12%), Positives = 73/234 (31%), Gaps = 36/234 (15%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAAS 115
           +++          F +A  YF++           R++   + +      Y   + ++A  
Sbjct: 434 LFQLGTQAFANTQFEQAIGYFDRSLGL---GQYNRQTKADALYWRGEAYYRLNRMEEAKR 490

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV--ERYTNSP 173
              +Y+    ++ N  Y      +++  +   + + Q+       +  + +  E+  N  
Sbjct: 491 NFTDYLQLTQQTHNEMYA-----LAHYNL-GYIAFHQKDYTQAQNWFRKYISLEKGENKT 544

Query: 174 YVKGARFYVTVG----RNQ-LAAKEVEIGR----------YYL------KRGEYVAAIPR 212
            +  A   +       RN   A                  +Y        + +Y   I  
Sbjct: 545 ALADAYNRIGDCYLDVRNFDEAKHYYSQAEAMNTPSGDYSFYQLALVSGLQKDYSGKITL 604

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
              +   Y  + +A  A+     +YV +    +A      +  +YP+   +R  
Sbjct: 605 LNRLAGKYPASPYAISALYEKGRSYVLMDNNQQAIASFKELLAKYPESPVSRKA 658



 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 64/212 (30%), Gaps = 28/212 (13%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A ++  ++N+ KA          +P      +   +     Y  G Y +A +    Y
Sbjct: 214 YYIAEIYAVKKNYDKAQIVAQNYLSAYPQNEHVAEMYRILGDAYYHFGDYHKAVASFRNY 273

Query: 121 ITQYPESKNVD--YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           + +    +N       Y++G+SY Q                + +  +     +    + A
Sbjct: 274 LEK----ENTPRRDALYMLGLSYFQT--------GVFSKAAETLGEVTTE--SDALTQNA 319

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
             ++ +    LA K          R  +  A            +      A+     +Y 
Sbjct: 320 YLHMGLAYLHLAEKNKA-------RMAFEQAA--ASNANLKIKEQAAYNYALCIHETSYS 370

Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLV 270
           A     E+  V       +P   +A  V + +
Sbjct: 371 AFG---ESVTVFEKFLNEFPNSEYAEMVSSYL 399



 Score = 35.5 bits (81), Expect = 7.7,   Method: Composition-based stats.
 Identities = 20/162 (12%), Positives = 46/162 (28%), Gaps = 22/162 (13%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              +   +  +Y   + + +   FSKA E   + + +     + + + L          +
Sbjct: 275 EKENTPRRDALYMLGLSYFQTGVFSKAAETLGEVTTE--SDALTQNAYLHMGLAYLHLAE 332

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
             +A    E+        K  +   Y   +   +          A    +    + +  +
Sbjct: 333 KNKARMAFEQAAASNANLKIKEQAAYNYALCIHETSYS------AFGESVTVFEKFLNEF 386

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
            NS Y +    Y+                 Y+    Y AA+ 
Sbjct: 387 PNSEYAEMVSSYLVEV--------------YMNTRSYEAALK 414


>gi|325300114|ref|YP_004260031.1| Tetratricopeptide TPR_2 repeat-containing protein [Bacteroides
           salanitronis DSM 18170]
 gi|324319667|gb|ADY37558.1| Tetratricopeptide TPR_2 repeat-containing protein [Bacteroides
           salanitronis DSM 18170]
          Length = 1003

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 75/214 (35%), Gaps = 45/214 (21%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D          +YE+   F++++N + A E +    + FP + ++RK+      + Y   
Sbjct: 611 DYPASPYIDDALYEQGRAFVQQENNAGAIERYTVLLQRFPESPLSRKASNEIGLLYYQED 670

Query: 109 KYQQAASLGEEYITQYPESKNV------------------DYVYYLVGMSYAQMIRDVPY 150
           KY +A +  ++ I+ YP S+                    DY+ ++  +           
Sbjct: 671 KYSEAIAAYKKVISDYPGSEEARLAQRDLKSIYIDLNRVDDYLSFVSTLPGGANFDVNER 730

Query: 151 D------------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           D            +  T+      +R ++ +    +   A +Y+ +    +A  E     
Sbjct: 731 DSLTYVAAERVYMRGETEEAKASFTRYLQSFPQGAFSVNASYYLGL----MAYNE----- 781

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
                  Y  A      VLA Y D + + EAM  
Sbjct: 782 -----KNYTEASAYLDKVLA-YPDNKFSGEAMKL 809



 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 61/159 (38%), Gaps = 24/159 (15%)

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           AFV+     Y          +T YP S  +D   Y  G ++ Q   +           ++
Sbjct: 589 AFVKGLQRDYAGKIQTLNRLLTDYPASPYIDDALYEQGRAFVQQENNAG--------AIE 640

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
             + +++R+  SP  + A                EIG  Y +  +Y  AI  ++ V+++Y
Sbjct: 641 RYTVLLQRFPESPLSRKASN--------------EIGLLYYQEDKYSEAIAAYKKVISDY 686

Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLI--QERY 257
             +E A  A   L   Y+ L  +D+    VS +     +
Sbjct: 687 PGSEEARLAQRDLKSIYIDLNRVDDYLSFVSTLPGGANF 725



 Score = 39.7 bits (92), Expect = 0.44,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 79/235 (33%), Gaps = 35/235 (14%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAAS 115
           ++   +L   +  F  A  YF Q           R++   + +     +Y   +Y QAAS
Sbjct: 435 LFRIGILAFAQAAFENAIGYFTQSIDL---GRYDRQTKADAYYWRGESKYRLEQYAQAAS 491

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY- 174
               Y+   P     +Y   L  + Y      V + Q+  +  L + +R  +        
Sbjct: 492 DYRLYLEYTPGRTGEEYALALYNLGY------VAFKQKQYEQALTWFTRCSQAQVKDRRI 545

Query: 175 VKGARFYVTVGR---NQLAA-KEVEI---------GRYYLKRGEYVAAIPR--------F 213
           V      +        + A    +           G Y L +  +V  + R         
Sbjct: 546 VADVYNRMGDCHFHARRFAEASALYAQASAADPSLGDYSLFQEAFVKGLQRDYAGKIQTL 605

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
             +L +Y  + + ++A+     A+V       A E  +++ +R+P+   +R    
Sbjct: 606 NRLLTDYPASPYIDDALYEQGRAFVQQENNAGAIERYTVLLQRFPESPLSRKASN 660



 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 50/173 (28%), Gaps = 34/173 (19%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           + Y  S    + +   Y   + + +   +SKA +  N+ +   P   + + + L S    
Sbjct: 271 ETYCGSPEGGKDREAQYALGMSYYQTGVYSKAVDALNKATGR-P-DALTQNAYLHSGLAY 328

Query: 105 YSAGKYQQAASLGEE-----YITQYPESKNV-DYVYYLVGMSYAQMIRDVPYDQRATKLM 158
                  +A    E+     +       +NV +   Y   +   +               
Sbjct: 329 LQLKDRTRARMAFEQASAMTF------DRNVQEQALYNYALCIHETSYS------PFAES 376

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           +    R +  + NS Y      Y+                 Y+    Y AA+ 
Sbjct: 377 VTVFERFLNEFPNSAYAAKVNDYLVEV--------------YMNTRSYQAALN 415



 Score = 35.5 bits (81), Expect = 7.7,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 50/150 (33%), Gaps = 23/150 (15%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           +    Y  A      Y+ Q   ++  +   Y++  +  ++       +R        +  
Sbjct: 42  FLRHDYAAAQQTLTHYLQQDTSAEFAEEAAYMLACTSYEL-NKPGRIRR--------LKA 92

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
            VE+Y +S YV                    IG  Y     Y  AI  F+     +    
Sbjct: 93  FVEQYPDSRYVNRVNA--------------LIGSAYFFDKNYPEAIMYFEKCNVRWLADG 138

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQ 254
             +E + RL  +Y+    + +A    S+++
Sbjct: 139 ERDEVLLRLGTSYLKGGALKDAALWFSILK 168


>gi|170701075|ref|ZP_02892052.1| tol-pal system protein YbgF [Burkholderia ambifaria IOP40-10]
 gi|170134015|gb|EDT02366.1| tol-pal system protein YbgF [Burkholderia ambifaria IOP40-10]
          Length = 249

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 45/137 (32%), Gaps = 8/137 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
             T    + +    A    +  NF  A   F      +P +     +       QY+   
Sbjct: 121 EGTVQPGETDALSAAQQQFRNGNFKAAAASFRSFIAKYPQSPYQPTAQYWLGNAQYALRD 180

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y+ + +  +  +++YP+          +G         +   Q+A     +   ++V +Y
Sbjct: 181 YRGSTATWQTVVSKYPQHPRAADALVAIG------TNQLEQGQKAA--AKKTFEQVVSQY 232

Query: 170 TNSPYVKGARFYVTVGR 186
             S   + A+  +   +
Sbjct: 233 AGSNAAQTAQGKIESIK 249



 Score = 43.6 bits (102), Expect = 0.027,   Method: Composition-based stats.
 Identities = 15/109 (13%), Positives = 35/109 (32%), Gaps = 14/109 (12%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         + +Y  SPY   A++++       A   +          +Y  +   
Sbjct: 142 GNFKAAAASFRSFIAKYPQSPYQPTAQYWLGN-----AQYAL---------RDYRGSTAT 187

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +Q V++ Y     A +A+  +    +       A++    +  +Y    
Sbjct: 188 WQTVVSKYPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYAGSN 236



 Score = 38.6 bits (89), Expect = 0.86,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 25/66 (37%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +   +   + G + AA   F+  +A Y  + +   A   L  A  AL     +      +
Sbjct: 132 LSAAQQQFRNGNFKAAAASFRSFIAKYPQSPYQPTAQYWLGNAQYALRDYRGSTATWQTV 191

Query: 254 QERYPQ 259
             +YPQ
Sbjct: 192 VSKYPQ 197


>gi|167586271|ref|ZP_02378659.1| tol-pal system protein YbgF [Burkholderia ubonensis Bu]
          Length = 249

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 18/143 (12%), Positives = 49/143 (34%), Gaps = 8/143 (5%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           + V     T    + + +  A    ++ NF  A   F      +P +     +       
Sbjct: 115 KTVDGVEGTVQPGETDAFNAAQQQFRDGNFKAAAASFRSFITKYPQSPYQPSAQYWLGNA 174

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           QY+   Y+ + +  +  ++++P+          +G         +   Q+A     +   
Sbjct: 175 QYALRDYRGSTATWQGIVSKFPQHPRAADALVAIG------TNQLEQGQKAA--AKKTFE 226

Query: 164 RIVERYTNSPYVKGARFYVTVGR 186
           ++V +Y  +   + A+  +   +
Sbjct: 227 QVVSQYNGTSAAQTAQGKLQTIK 249



 Score = 42.8 bits (100), Expect = 0.053,   Method: Composition-based stats.
 Identities = 14/120 (11%), Positives = 37/120 (30%), Gaps = 15/120 (12%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
               +    D    K         + +Y  SPY   A++++       A   +       
Sbjct: 132 FNAAQQQFRD-GNFKAAAASFRSFITKYPQSPYQPSAQYWLGN-----AQYAL------- 178

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
              +Y  +   +Q +++ +     A +A+  +    +       A++    +  +Y    
Sbjct: 179 --RDYRGSTATWQGIVSKFPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYNGTS 236


>gi|239815675|ref|YP_002944585.1| tol-pal system protein YbgF [Variovorax paradoxus S110]
 gi|239802252|gb|ACS19319.1| tol-pal system protein YbgF [Variovorax paradoxus S110]
          Length = 249

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 18/137 (13%), Positives = 49/137 (35%), Gaps = 8/137 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
             T    ++  ++ A+   +   F++A   F +  + +P +G    +L      QY+   
Sbjct: 121 EFTADPKEKADFDAALGIFRAGQFAQAQTAFAEFVKRYPQSGYNASALFWLGNAQYATRN 180

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y +A +     ++  P+          +     ++        + T+   + +  + + Y
Sbjct: 181 YNEAIANFRSMLSLAPDHAKAPEAVLSIANCQIEL--------KDTRAARRTLEDLTKAY 232

Query: 170 TNSPYVKGARFYVTVGR 186
             S   +  R  ++  R
Sbjct: 233 PQSEAAQAGRERLSRLR 249



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 36/105 (34%), Gaps = 14/105 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                 +  V+RY  S Y   A F++   +                   Y  AI  F+ +
Sbjct: 146 QAQTAFAEFVKRYPQSGYNASALFWLGNAQ--------------YATRNYNEAIANFRSM 191

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           L+   D   A EA+  +    + L     AR  +  + + YPQ  
Sbjct: 192 LSLAPDHAKAPEAVLSIANCQIELKDTRAARRTLEDLTKAYPQSE 236



 Score = 40.1 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 21/142 (14%), Positives = 46/142 (32%), Gaps = 22/142 (15%)

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
            K+   +A   + AG++ QA +   E++ +YP+S       + +G +            R
Sbjct: 128 EKADFDAALGIFRAGQFAQAQTAFAEFVKRYPQSGYNASALFWLGNAQYAT--------R 179

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
                +     ++    +      A   +   + +L               +  AA    
Sbjct: 180 NYNEAIANFRSMLSLAPDHAKAPEAVLSIANCQIEL--------------KDTRAARRTL 225

Query: 214 QLVLANYSDAEHAEEAMARLVE 235
           + +   Y  +E A+    RL  
Sbjct: 226 EDLTKAYPQSEAAQAGRERLSR 247


>gi|134294842|ref|YP_001118577.1| hypothetical protein Bcep1808_0730 [Burkholderia vietnamiensis G4]
 gi|134137999|gb|ABO53742.1| conserved hypothetical protein [Burkholderia vietnamiensis G4]
          Length = 249

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 45/137 (32%), Gaps = 8/137 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
             T    + +    A    +  NF  A   F      +P +     +       QY+   
Sbjct: 121 EGTVQPGETDALSAAQQQFRNGNFKAAAASFRSFIAKYPQSPYQPTAQYWLGNAQYALRD 180

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y+ + +  +  +++YP+          +G         +   Q+A     +   ++V +Y
Sbjct: 181 YRGSTATWQAIVSKYPQHPRAADALVAIG------TNQLEQGQKAA--AKKTFEQVVSQY 232

Query: 170 TNSPYVKGARFYVTVGR 186
             S   + A+  +   +
Sbjct: 233 AGSNAAQTAQGKIESIK 249



 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/109 (12%), Positives = 35/109 (32%), Gaps = 14/109 (12%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         + +Y  SPY   A++++       A   +          +Y  +   
Sbjct: 142 GNFKAAAASFRSFIAKYPQSPYQPTAQYWLGN-----AQYAL---------RDYRGSTAT 187

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +Q +++ Y     A +A+  +    +       A++    +  +Y    
Sbjct: 188 WQAIVSKYPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYAGSN 236



 Score = 38.9 bits (90), Expect = 0.72,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 25/66 (37%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +   +   + G + AA   F+  +A Y  + +   A   L  A  AL     +      I
Sbjct: 132 LSAAQQQFRNGNFKAAAASFRSFIAKYPQSPYQPTAQYWLGNAQYALRDYRGSTATWQAI 191

Query: 254 QERYPQ 259
             +YPQ
Sbjct: 192 VSKYPQ 197


>gi|237709421|ref|ZP_04539902.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|229456477|gb|EEO62198.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 967

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 72/222 (32%), Gaps = 46/222 (20%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D          +YE+   F++ ++ + A   FN   + FP + VAR++      + Y   
Sbjct: 574 DYPESQYMDDALYEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAANEIGLLYYQDD 633

Query: 109 KYQQAASLGEEYITQYPESKNV------------------DYVYYLVGMSYAQMIRDVPY 150
           KY +A    ++ I  YP S+                    +Y  +   +           
Sbjct: 634 KYPEAIQAYKQVIASYPGSEEARLAQRDLKSIYIDLNKVDEYANFASTIPGGANFDVNER 693

Query: 151 D------------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           D            +          +R ++ +    +   A +Y+ +              
Sbjct: 694 DSLTYVAAERVYMRGEVTEARNSFTRYLQTFPEGAFSLNANYYIGLID------------ 741

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE-AYVA 239
               +  Y +A      VL  Y + +++E+AM    E AY A
Sbjct: 742 --YNQKAYESAARHLDKVLE-YPNNKYSEDAMLMGAEMAYTA 780



 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 74/214 (34%), Gaps = 26/214 (12%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLG 117
           +Y     + K++N+  A  +F +          A ++          +   +++QA    
Sbjct: 474 LYNLGYTYFKQKNYGNAGTWFTRFVDRGSANERAMQADAYNRIGDCNFYDRRFEQARQDY 533

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
              +   P     DY  Y         +R +  D       +Q ++R++  Y  S Y+  
Sbjct: 534 ARAVEIDPS--LGDYSLYQEA-----FVRGLQRD---YNGKVQTLNRLISDYPESQYMDD 583

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           A                E GR +++  +   AI RF +++  + ++  A  A   +   Y
Sbjct: 584 AL--------------YEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAANEIGLLY 629

Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
                  EA +    +   YP    AR  +  +K
Sbjct: 630 YQDDKYPEAIQAYKQVIASYPGSEEARLAQRDLK 663



 Score = 40.1 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 75/248 (30%), Gaps = 52/248 (20%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +  L +   +  C L G  +Q +           R  RE   K    +         E
Sbjct: 1   MKRKTLLMAALMGGCSLQGMAQQITPKDVAGDKEYNRVCREYELKGGDSM---------E 51

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +P +    + L + A   +  GKY++A +L                      
Sbjct: 52  LLQAYLDKYPDSRHKNRVLSLIASAYFMEGKYKEAIALFRS------------------- 92

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL------AAK 192
               + + D   D  A +L   Y+            ++ A  + T+ +         A  
Sbjct: 93  -CDLEALPDKERDDCAMRLATSYLKE--------DNLREAAVWFTLLKEVSPLYQDDAVY 143

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM--ARLVEAYVALALMDEAREVV 250
            +    Y  KR  Y  A+  FQ +  +         A+    + E Y+      +AR V 
Sbjct: 144 NLAYIDYVEKR--YDKALKSFQSLQND-----AVYAALVPYYIGEIYLVKGNYQQARTVA 196

Query: 251 SLIQERYP 258
               E+YP
Sbjct: 197 KAYLEQYP 204



 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 29/59 (49%), Gaps = 1/59 (1%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y   ++   ++ +  A  + ++    +P    +  ++LM A + Y+A  Y++A  + ++
Sbjct: 735 YYIGLIDYNQKAYESAARHLDKVLE-YPNNKYSEDAMLMGAEMAYTAKDYEKALHIYKQ 792



 Score = 36.2 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 76/233 (32%), Gaps = 31/233 (13%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A         ++A   F +  + FP    +  +      + Y+   Y+ AA   ++ 
Sbjct: 698 YVAAERVYMRGEVTEARNSFTRYLQTFPEGAFSLNANYYIGLIDYNQKAYESAARHLDKV 757

Query: 121 ITQYPESKNVDYVY------------YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +  YP +K  +               Y   +   + ++D        +L    M R    
Sbjct: 758 LE-YPNNKYSEDAMLMGAEMAYTAKDYEKALHIYKQLKDKAASMERRQLAKTGMLRSAHM 816

Query: 169 YTNSPYVKGARFYVTVGRNQLAAK----EVEIGRYYLKRGEYVAAIPRFQLVLANY---- 220
             N   +      +    + LA      E+    +Y +   Y+ A       + +     
Sbjct: 817 LGNEEEI------IFTATDLLADTKLAPELSNEAHYYRAKAYLDAGK-TDGAMEDLKILA 869

Query: 221 SDAEHAE--EAMARLVEAYVALALMDEA-REVVSLIQERYPQGYWARYVETLV 270
            D  +    EA  ++ + Y      D+A +EV++ I+   P  YW      L+
Sbjct: 870 KDTRNVYGAEAKYKVAQIYFDGGQTDKAEQEVLNYIEVSTPHTYWLARSFVLL 922



 Score = 36.2 bits (83), Expect = 5.2,   Method: Composition-based stats.
 Identities = 20/153 (13%), Positives = 45/153 (29%), Gaps = 24/153 (15%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +YE  + +     +SKA     + +       +++ + L       +  +  +A    E+
Sbjct: 248 LYELGMSYYYTGVYSKAAATLGEMASVH--DALSQNAYLHMGLAYLNLKERNRARMAFEQ 305

Query: 120 YITQYPESKNV-DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
               +     V +   Y   +   +               +    R +  + NSPY +  
Sbjct: 306 -AANFSFDPKVKEQALYNYALCIHETSYS------PFAESVTVFERFLNEFPNSPYTERV 358

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
             Y+                 Y+    Y AA+ 
Sbjct: 359 NDYLIEV--------------YMNTRSYEAALK 377


>gi|237724975|ref|ZP_04555456.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|229436713|gb|EEO46790.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
          Length = 967

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 72/222 (32%), Gaps = 46/222 (20%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D          +YE+   F++ ++ + A   FN   + FP + VAR++      + Y   
Sbjct: 574 DYPESQYMDDALYEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAANEIGLLYYQDD 633

Query: 109 KYQQAASLGEEYITQYPESKNV------------------DYVYYLVGMSYAQMIRDVPY 150
           KY +A    ++ I  YP S+                    +Y  +   +           
Sbjct: 634 KYPEAIQAYKQVIASYPGSEEARLAQRDLKSIYIDLNKVDEYANFASTIPGGANFDVNER 693

Query: 151 D------------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           D            +          +R ++ +    +   A +Y+ +              
Sbjct: 694 DSLTYVAAERVYMRGEVTEARNSFTRYLQTFPEGAFSLNANYYIGLID------------ 741

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE-AYVA 239
               +  Y +A      VL  Y + +++E+AM    E AY A
Sbjct: 742 --YNQKAYESAARHLDKVLE-YPNNKYSEDAMLMGAEMAYTA 780



 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 74/214 (34%), Gaps = 26/214 (12%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLG 117
           +Y     + K++N+  A  +F +          A ++          +   +++QA    
Sbjct: 474 LYNLGYTYFKQKNYGNAGTWFTRFVDRGSANERAMQADAYNRIGDCNFYDRRFEQARQDY 533

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
              +   P     DY  Y         +R +  D       +Q ++R++  Y  S Y+  
Sbjct: 534 ARAVEIDPS--LGDYSLYQEA-----FVRGLQRD---YNGKVQTLNRLISDYPESQYMDD 583

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           A                E GR +++  +   AI RF +++  + ++  A  A   +   Y
Sbjct: 584 AL--------------YEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAANEIGLLY 629

Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
                  EA +    +   YP    AR  +  +K
Sbjct: 630 YQDDKYPEAIQAYKQVIASYPGSEEARLAQRDLK 663



 Score = 40.1 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 75/248 (30%), Gaps = 52/248 (20%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +  L +   +  C L G  +Q +           R  RE   K    +         E
Sbjct: 1   MKRKTLLMAALMGGCSLQGMAQQITPKDVAGDKEYNRVCREYELKGGDSM---------E 51

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +P +    + L + A   +  GKY++A +L                      
Sbjct: 52  LLQAYLDKYPDSRHKNRVLSLIASAYFMEGKYKEAIALFRS------------------- 92

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL------AAK 192
               + + D   D  A +L   Y+            ++ A  + T+ +         A  
Sbjct: 93  -CDLEALPDKERDDCAMRLATSYLKE--------DNLREAAVWFTLLKEVSPLYQDDAVY 143

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM--ARLVEAYVALALMDEAREVV 250
            +    Y  KR  Y  A+  FQ +  +         A+    + E Y+      +AR V 
Sbjct: 144 NLAYIDYVEKR--YDKALKSFQSLQND-----AVYAALVPYYIGEIYLVKGNYQQARTVA 196

Query: 251 SLIQERYP 258
               E+YP
Sbjct: 197 KAYLEQYP 204



 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 29/59 (49%), Gaps = 1/59 (1%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y   ++   ++ +  A  + ++    +P    +  ++LM A + Y+A  Y++A  + ++
Sbjct: 735 YYIGLIDYNQKAYESAARHLDKVLE-YPNNKYSEDAMLMGAEMAYTAKDYEKALHIYKQ 792



 Score = 36.2 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 76/233 (32%), Gaps = 31/233 (13%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A         ++A   F +  + FP    +  +      + Y+   Y+ AA   ++ 
Sbjct: 698 YVAAERVYMRGEVTEARNSFTRYLQTFPEGAFSLNANYYIGLIDYNQKAYESAARHLDKV 757

Query: 121 ITQYPESKNVDYVY------------YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +  YP +K  +               Y   +   + ++D        +L    M R    
Sbjct: 758 LE-YPNNKYSEDAMLMGAEMAYTAKDYEKALHIYKQLKDKAASMERRQLAKTGMLRSAHM 816

Query: 169 YTNSPYVKGARFYVTVGRNQLAAK----EVEIGRYYLKRGEYVAAIPRFQLVLANY---- 220
             N   +      +    + LA      E+    +Y +   Y+ A       + +     
Sbjct: 817 LGNEEEI------IFTATDLLADTKLAPELSNEAHYYRAKAYLDAGK-TDGAMEDLKILA 869

Query: 221 SDAEHAE--EAMARLVEAYVALALMDEA-REVVSLIQERYPQGYWARYVETLV 270
            D  +    EA  ++ + Y      D+A +EV++ I+   P  YW      L+
Sbjct: 870 KDTRNVYGAEAKYKVAQIYFDGGQTDKAEQEVLNYIEVSTPHTYWLARSFVLL 922



 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 20/153 (13%), Positives = 45/153 (29%), Gaps = 24/153 (15%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +YE  + +     +SKA     + +       +++ + L       +  +  +A    E+
Sbjct: 248 LYELGMSYYYTGVYSKAAATLGEMASVH--DALSQNAYLHMGLAYLNLKERNRARMAFEQ 305

Query: 120 YITQYPESKNV-DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
               +     V +   Y   +   +               +    R +  + NSPY +  
Sbjct: 306 -AANFSFDPKVKEQALYNYALCIHETSYS------PFAESVTVFERFLNEFPNSPYTERV 358

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
             Y+                 Y+    Y AA+ 
Sbjct: 359 NDYLIEV--------------YMNTRSYEAALK 377


>gi|161525758|ref|YP_001580770.1| tol-pal system protein YbgF [Burkholderia multivorans ATCC 17616]
 gi|189349520|ref|YP_001945148.1| hypothetical protein BMULJ_00649 [Burkholderia multivorans ATCC
           17616]
 gi|221201004|ref|ZP_03574044.1| tol-pal system protein YbgF [Burkholderia multivorans CGD2M]
 gi|221206544|ref|ZP_03579557.1| tol-pal system protein YbgF [Burkholderia multivorans CGD2]
 gi|221214398|ref|ZP_03587369.1| tol-pal system protein YbgF [Burkholderia multivorans CGD1]
 gi|160343187|gb|ABX16273.1| tol-pal system protein YbgF [Burkholderia multivorans ATCC 17616]
 gi|189333542|dbj|BAG42612.1| conserved hypothetical protein [Burkholderia multivorans ATCC
           17616]
 gi|221165655|gb|EED98130.1| tol-pal system protein YbgF [Burkholderia multivorans CGD1]
 gi|221173853|gb|EEE06287.1| tol-pal system protein YbgF [Burkholderia multivorans CGD2]
 gi|221178854|gb|EEE11261.1| tol-pal system protein YbgF [Burkholderia multivorans CGD2M]
          Length = 249

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/143 (13%), Positives = 47/143 (32%), Gaps = 8/143 (5%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           + +     T    + +    A    +  NF  A   F      +P +     +       
Sbjct: 115 KTIDGVEGTVQPGETDALNAAQQQFRNGNFKAAAASFRSFIAKYPQSPYQPTAQYWLGNA 174

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           QY+   Y+ + +  +  +++YP+          +G         +   Q+A     +   
Sbjct: 175 QYALRDYRGSTATWQAIVSKYPQHPRAADALVAIG------TNQLEQGQKAA--AKKTFE 226

Query: 164 RIVERYTNSPYVKGARFYVTVGR 186
           ++V +Y  S   + A+  +   +
Sbjct: 227 QVVSQYAGSNAAQTAQGKLESIK 249



 Score = 40.9 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 14/109 (12%), Positives = 35/109 (32%), Gaps = 14/109 (12%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         + +Y  SPY   A++++   +  L               +Y  +   
Sbjct: 142 GNFKAAAASFRSFIAKYPQSPYQPTAQYWLGNAQYAL--------------RDYRGSTAT 187

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +Q +++ Y     A +A+  +    +       A++    +  +Y    
Sbjct: 188 WQAIVSKYPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYAGSN 236



 Score = 38.9 bits (90), Expect = 0.82,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 25/66 (37%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +   +   + G + AA   F+  +A Y  + +   A   L  A  AL     +      I
Sbjct: 132 LNAAQQQFRNGNFKAAAASFRSFIAKYPQSPYQPTAQYWLGNAQYALRDYRGSTATWQAI 191

Query: 254 QERYPQ 259
             +YPQ
Sbjct: 192 VSKYPQ 197


>gi|60683635|ref|YP_213779.1| TPR repeat-containing protein [Bacteroides fragilis NCTC 9343]
 gi|253566489|ref|ZP_04843942.1| TPR repeat-containing protein [Bacteroides sp. 3_2_5]
 gi|265767358|ref|ZP_06095024.1| TPR repeat-containing protein [Bacteroides sp. 2_1_16]
 gi|60495069|emb|CAH09888.1| putative TPR-repeat protein [Bacteroides fragilis NCTC 9343]
 gi|251944661|gb|EES85136.1| TPR repeat-containing protein [Bacteroides sp. 3_2_5]
 gi|263252663|gb|EEZ24175.1| TPR repeat-containing protein [Bacteroides sp. 2_1_16]
 gi|301165147|emb|CBW24717.1| putative TPR-repeat protein [Bacteroides fragilis 638R]
          Length = 1002

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/206 (19%), Positives = 75/206 (36%), Gaps = 31/206 (15%)

Query: 44  RDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSR-DFPFAGVA--RKSLLM 99
           + + L+   +     + Y +    +L  +NF +A  Y++Q    + P    +  + +L+ 
Sbjct: 533 KYISLEKGENKTALADAYNRIGDCYLDVRNFDEAKHYYSQAEAMNTPSGDYSFYQLALVS 592

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
                     Y    +L      +YP S       Y  G SY  M  +        +  +
Sbjct: 593 G-----LQKDYSGKITLLNRLAGKYPASPYAISALYEKGRSYVLMDNN--------QQAI 639

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
                ++ +Y  SP  + A                EIG  Y +  +Y  AI  ++ V+  
Sbjct: 640 ASFKELLAKYPESPVSRKAAA--------------EIGLLYYQNEDYDQAINAYKQVVQK 685

Query: 220 YSDAEHAEEAMARLVEAYVALALMDE 245
           Y  ++ A  AM  L   YV +  +DE
Sbjct: 686 YPGSDEARLAMRDLKSIYVDMNRIDE 711



 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/277 (14%), Positives = 78/277 (28%), Gaps = 60/277 (21%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K    +  ++A C  V  + Q+S  +             +Y++      ++N++ A  
Sbjct: 1   MKKKISRLICAVACCVPVALQAQTSEKI--------TSPVNLYKEGKELFLQKNYAAAMP 52

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                 R      +  ++  M     Y     + A +    Y+  YP++ + + +Y L+ 
Sbjct: 53  PLRTFVRQKADVNLKEEAEYMLVCSAYELKD-RNAIAQLRNYLDTYPDTPHANRIYALIA 111

Query: 139 MSYAQM-----------------IRDVPYDQ------------RATKLMLQYMSRIVERY 169
            +Y                    + +   D                K    +   +    
Sbjct: 112 SAYFYQGNYDEALALFNSSRLDLLGNEERDDMTYQLATCYLKVGNVKEAAIWFETLKASS 171

Query: 170 TNSPYVKGARFYVTVGRNQLAAKE--------------------VEIGRYYLKRGEYVAA 209
               Y     +Y++  R      +                      I   Y  +  Y  A
Sbjct: 172 P--KYANDCSYYISYIRYTQKRYDEALKGFLPLQDDAKYKALVPYYIAEIYAVKKNYDKA 229

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
               Q  L+ Y   EHA E    L +AY       +A
Sbjct: 230 QIVAQNYLSAYPQNEHAAEMYRILGDAYYHFGDYHKA 266



 Score = 49.3 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 72/214 (33%), Gaps = 28/214 (13%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           Y    +   ++++++A  +F +     +      +A  +             + +A    
Sbjct: 512 YNLGYIAFHQKDYTQAQNWFRKYISLEKGENKTALA-DAYNRIGDCYLDVRNFDEAKHYY 570

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
            +       + + DY +Y + +                   +  ++R+  +Y  SPY   
Sbjct: 571 SQAEAMN--TPSGDYSFYQLALVSGLQKDYSGK--------ITLLNRLAGKYPASPYAIS 620

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           A                E GR Y+       AI  F+ +LA Y ++  + +A A +   Y
Sbjct: 621 AL--------------YEKGRSYVLMDNNQQAIASFKELLAKYPESPVSRKAAAEIGLLY 666

Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
                 D+A      + ++YP    AR     +K
Sbjct: 667 YQNEDYDQAINAYKQVVQKYPGSDEARLAMRDLK 700



 Score = 41.3 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 29/234 (12%), Positives = 73/234 (31%), Gaps = 36/234 (15%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAAS 115
           +++          F +A  YF++           R++   + +      Y   + ++A  
Sbjct: 434 LFQLGTQAFANTQFEQAIGYFDRSLGL---GQYNRQTKADALYWRGEAYYRLNRMEEAKR 490

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV--ERYTNSP 173
              +Y+    ++ N  Y      +++  +   + + Q+       +  + +  E+  N  
Sbjct: 491 NFTDYLQLTQQTHNEMYA-----LAHYNL-GYIAFHQKDYTQAQNWFRKYISLEKGENKT 544

Query: 174 YVKGARFYVTVG----RNQ-LAAKEVEIGR----------YYL------KRGEYVAAIPR 212
            +  A   +       RN   A                  +Y        + +Y   I  
Sbjct: 545 ALADAYNRIGDCYLDVRNFDEAKHYYSQAEAMNTPSGDYSFYQLALVSGLQKDYSGKITL 604

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
              +   Y  + +A  A+     +YV +    +A      +  +YP+   +R  
Sbjct: 605 LNRLAGKYPASPYAISALYEKGRSYVLMDNNQQAIASFKELLAKYPESPVSRKA 658



 Score = 40.9 bits (95), Expect = 0.17,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 65/212 (30%), Gaps = 28/212 (13%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A ++  ++N+ KA          +P    A +   +     Y  G Y +A +    Y
Sbjct: 214 YYIAEIYAVKKNYDKAQIVAQNYLSAYPQNEHAAEMYRILGDAYYHFGDYHKAVASFRNY 273

Query: 121 ITQYPESKNVD--YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           + +    +N       Y++G+SY Q                + +  +     +    + A
Sbjct: 274 LEK----ENTPRRDALYMLGLSYFQT--------GVFSKAAETLGEVTTE--SDALTQNA 319

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
             ++ +    LA K          R  +  A            +      A+     +Y 
Sbjct: 320 YLHMGLAYLHLAEKNKA-------RMAFEQAA--ASNANLKIKEQAAYNYALCIHETSYS 370

Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLV 270
           A     E+  V       +P   +A  V + +
Sbjct: 371 AFG---ESVTVFEKFLNEFPNSEYAEMVSSYL 399



 Score = 35.5 bits (81), Expect = 7.7,   Method: Composition-based stats.
 Identities = 20/162 (12%), Positives = 46/162 (28%), Gaps = 22/162 (13%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              +   +  +Y   + + +   FSKA E   + + +     + + + L          +
Sbjct: 275 EKENTPRRDALYMLGLSYFQTGVFSKAAETLGEVTTE--SDALTQNAYLHMGLAYLHLAE 332

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
             +A    E+        K  +   Y   +   +          A    +    + +  +
Sbjct: 333 KNKARMAFEQAAASNANLKIKEQAAYNYALCIHETSYS------AFGESVTVFEKFLNEF 386

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
            NS Y +    Y+                 Y+    Y AA+ 
Sbjct: 387 PNSEYAEMVSSYLVEV--------------YMNTRSYEAALK 414


>gi|224417743|ref|ZP_03655749.1| TPR repeat-containing protein [Helicobacter canadensis MIT 98-5491]
          Length = 171

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 59/151 (39%), Gaps = 4/151 (2%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
            +  KA  YF     +   + +  +++L+         +Y  A    +EY  ++ + +N+
Sbjct: 1   GDLEKADSYFTSLQSEHLHSPLLSEAMLILGRAHMQEEEYLLAIFYFDEYTKRFGDGQNI 60

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
           D++ +L   +          DQ+  +  ++      ++Y  S Y       +     +LA
Sbjct: 61  DFINFLKLQANYFAFAKQFRDQQLLEKSIKDAQDFGQKYPYSRYRPIVDTMLLKL--ELA 118

Query: 191 AKEV--EIGRYYLKRGEYVAAIPRFQLVLAN 219
              +  EI + Y K+ +  AA    Q +  N
Sbjct: 119 NLSLNKEIIKLYDKKDKPQAAEYYQQKINEN 149


>gi|307721713|ref|YP_003892853.1| DNA uptake lipoprotein [Sulfurimonas autotrophica DSM 16294]
 gi|306979806|gb|ADN09841.1| DNA uptake lipoprotein [Sulfurimonas autotrophica DSM 16294]
          Length = 246

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 66/192 (34%), Gaps = 7/192 (3%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K    +  ++    L     +   +    +V         Y K V  +   +  KA +
Sbjct: 1   MKKQIYILLMALTFSLLFSACTKEVDEYNKPAVYW-------YGKIVESISAGSIDKADD 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
           Y++    +   + +  ++ ++ A       +Y        EY+ +Y  +   ++  +L  
Sbjct: 54  YYSSLQGEHIGSPLLPEATMILAIAHMHNEEYLLTEHFLNEYVRRYANANEREFAEFLKI 113

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
            +  + + +   DQ   +  ++      + Y +S Y       +T      A+    I  
Sbjct: 114 KAKYKALPNPRRDQVLIQEAIKDAKTFKQNYPHSMYYSLVDTMLTNLYLADASLNEAIAD 173

Query: 199 YYLKRGEYVAAI 210
            Y++  +  AA 
Sbjct: 174 LYVRLDKPKAAA 185


>gi|94987535|ref|YP_595468.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)proteins [Lawsonia intracellularis PHE/MN1-00]
 gi|94731784|emb|CAJ55147.1| Outer membrane protein and related peptidoglycan-associated
           (lipo)proteins [Lawsonia intracellularis PHE/MN1-00]
          Length = 1076

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 81/233 (34%), Gaps = 35/233 (15%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
            S+      ++   R    +    ++ L+  N  +A  YF    R FP +    ++ L  
Sbjct: 487 TSTNKAMNFNLRSPRVAEALMRLGMVNLRIGNQDEAAGYFGALRRKFPQSEFIPEAYLAL 546

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
              Q+S G+Y  A    +  +  YPESK V           ++ + +  + Q      L 
Sbjct: 547 GKDQFSKGEYADAVKTFQLILDNYPESKAVQDA--------SRFMAEALFKQGHYSRALI 598

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
            +  +  R+    Y++         +         +G  Y +         R    L  Y
Sbjct: 599 LVDFVDRRWPR-LYLEDPN----YLK--------MVGDLYSRE-------NRLDDALKAY 638

Query: 221 -------SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
                   +A+ + + + ++  +Y    LM   ++V   + +++P+   A   
Sbjct: 639 WTYYNLVPEAKDSHDTLFKIGTSYFKKGLMQGGKDVFEELLKKFPKSDSAPKA 691



 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 73/234 (31%), Gaps = 49/234 (20%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC-----------SRDFPFAGVA 93
           D   + V        + E+A   ++     KA +                   + F+ + 
Sbjct: 411 DEKGNPVGKPPDTTAIIEEAKKNMRAGQVQKAKDLLATLKGHALVQEQHEEVLYLFSELN 470

Query: 94  RKSLLMSAFVQYSA---GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
            K         Y       Y+   +   + +     S  V      +GM   ++      
Sbjct: 471 EKI--------YKDRWIEGYEPIITSTNKAMNFNLRSPRVAEALMRLGMVNLRI------ 516

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
                     Y   +  ++  S ++  A  Y+ +G++Q              +GEY  A+
Sbjct: 517 --GNQDEAAGYFGALRRKFPQSEFIPEA--YLALGKDQ------------FSKGEYADAV 560

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
             FQL+L NY +++  ++A   + EA         A     LI   +    W R
Sbjct: 561 KTFQLILDNYPESKAVQDASRFMAEALFKQGHYSRA-----LILVDFVDRRWPR 609



 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 51/131 (38%), Gaps = 24/131 (18%)

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSA--GKYQQAASLGEEYITQYPESKNVDYVYYL 136
           Y+ +   ++P +  A+++ +      +         A ++ ++++ +YPES        +
Sbjct: 725 YYKKILDEYPNSPEAQQAAIRL--AAWKLWHRDIPTAMTMAQQFLDKYPESPYAPRAEEI 782

Query: 137 VGMSYAQMIRDVPYDQRATKLMLQY--MSRIVERYTNSPYVKGARFYV-TVGRNQLAAKE 193
           +            +DQ    L LQ     RI+  +   PY++ A   +    R  LA   
Sbjct: 783 IA---------RGFDQSFA-LALQEENYERILSLWEKYPYLQIAYKDMTDELRVALA--- 829

Query: 194 VEIGRYYLKRG 204
               R YL RG
Sbjct: 830 ----RAYLNRG 836



 Score = 45.5 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 78/236 (33%), Gaps = 34/236 (14%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ------ 104
                    +++    + K+       + F +  + FP +  A K+LL     Q      
Sbjct: 646 PEAKDSHDTLFKIGTSYFKKGLMQGGKDVFEELLKKFPKSDSAPKALLALGEEQVIKENP 705

Query: 105 --------YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
                   +            ++ + +YP S        +   ++    RD+P       
Sbjct: 706 TIQELVTIFENPSSTIPEIYYKKILDEYPNSPEAQQAA-IRLAAWKLWHRDIPT------ 758

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ---LAAKEVEIGRYYLKRGEYVAAIPRF 213
             +    + +++Y  SPY   A   +  G +Q   LA +E      Y +    ++   ++
Sbjct: 759 -AMTMAQQFLDKYPESPYAPRAEEIIARGFDQSFALALQE----ENYERI---LSLWEKY 810

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
             +   Y D    +E    L  AY+     ++  ++++   E      +  YV  L
Sbjct: 811 PYLQIAYKD--MTDELRVALARAYLNRGDEEKGMDLLNQFLESPQDPNYGDYVYNL 864



 Score = 35.9 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 31/83 (37%)

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
           ++A   + +G   L+ G    A   F  +   +  +E   EA   L +   +     +A 
Sbjct: 501 RVAEALMRLGMVNLRIGNQDEAAGYFGALRRKFPQSEFIPEAYLALGKDQFSKGEYADAV 560

Query: 248 EVVSLIQERYPQGYWARYVETLV 270
           +   LI + YP+    +     +
Sbjct: 561 KTFQLILDNYPESKAVQDASRFM 583


>gi|256819391|ref|YP_003140670.1| hypothetical protein Coch_0551 [Capnocytophaga ochracea DSM 7271]
 gi|256580974|gb|ACU92109.1| Tetratricopeptide TPR_2 repeat protein [Capnocytophaga ochracea DSM
           7271]
          Length = 1001

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 71/213 (33%), Gaps = 25/213 (11%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAG 108
           +     Y +  Y  A     ++N++ A   F +  +  P  +     ++L  A   +  G
Sbjct: 492 APKTEEYAKGFYGLAYANFNQKNYAGAIANFEKYLKQNPKNSSWKHDAILRLADSYFVTG 551

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           KY  A     + I    +S + DY  Y   +SY  + R            ++ + R V+ 
Sbjct: 552 KYWPAMEGYNKLIEA--KSSDQDYAAYQKAISYGFVDRLNSK--------IEDLERFVKN 601

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y +S     A                E+G  Y+ +G     +  +Q +   Y        
Sbjct: 602 YKSSNLRPNAL--------------FELGNAYVTKGNTQKGLQYYQQLAKEYKGNVLVPR 647

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           AM R    Y       +A  +   I + YP   
Sbjct: 648 AMLREGLVYYNRNENQKALTLFQTIAKDYPNTN 680



 Score = 39.7 bits (92), Expect = 0.44,   Method: Composition-based stats.
 Identities = 35/247 (14%), Positives = 78/247 (31%), Gaps = 48/247 (19%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           +   D      Y++  + + +    E  +++A +Y  +       + +A ++   +    
Sbjct: 413 EKSNDPKDKETYKKVAFYRGLELFNELQYNEALKYLQKAIGGN--SALAARATYWAGETA 470

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
           Y    Y+ A S   +++      K  +Y   +Y  G++YA       ++Q+     +   
Sbjct: 471 YQLKDYKGAESYFTQFLHNSSAPKTEEYAKGFY--GLAYAN------FNQKNYAGAIANF 522

Query: 163 SRIVERYT-NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG----------------E 205
            + +++   NS +   A          LA      G+Y+                     
Sbjct: 523 EKYLKQNPKNSSWKHDAILR-------LADSYFVTGKYWPAMEGYNKLIEAKSSDQDYAA 575

Query: 206 YVAAIPR------------FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           Y  AI               +  + NY  +     A+  L  AYV      +  +    +
Sbjct: 576 YQKAISYGFVDRLNSKIEDLERFVKNYKSSNLRPNALFELGNAYVTKGNTQKGLQYYQQL 635

Query: 254 QERYPQG 260
            + Y   
Sbjct: 636 AKEYKGN 642



 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 84/228 (36%), Gaps = 44/228 (19%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
              ++E    ++ + N  K  +Y+ Q ++++    +  +++L    V Y+  + Q+A +L
Sbjct: 609 PNALFELGNAYVTKGNTQKGLQYYQQLAKEYKGNVLVPRAMLREGLVYYNRNENQKALTL 668

Query: 117 GEEYITQYPESKNV------------------DYVYYLVGMSYAQMIR-----------D 147
            +     YP +                     +Y  +  G+ Y ++             +
Sbjct: 669 FQTIAKDYPNTNEASQAVASAKLIYVDMGNVNEYASWAKGLGYVEVTDLELEGATYEAAE 728

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
             Y Q  TK  +    + ++ + N      A              E  + + Y   G+  
Sbjct: 729 RQYMQNNTKEAISGFEKYLKEFPNGMRRTNA--------------EFFLAQMYFNSGQKA 774

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
            A+  ++ V  + S+ E+ E+++ R+ +  +      +A+  +  ++ 
Sbjct: 775 KALTHYENVTKSGSN-EYGEQSLTRVCQILLEAGSYLKAKPYLEDLER 821


>gi|170691333|ref|ZP_02882498.1| tol-pal system protein YbgF [Burkholderia graminis C4D1M]
 gi|170143538|gb|EDT11701.1| tol-pal system protein YbgF [Burkholderia graminis C4D1M]
          Length = 252

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 48/132 (36%), Gaps = 8/132 (6%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
             + + +  A    +  +F  A   F      FP +     +        Y+   Y+ + 
Sbjct: 129 PGETDAFNAASQQFRNGDFKNAAASFRSFIAKFPSSPYQPTAQYWLGNALYALRDYKGST 188

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
           +  +  +  YP+         L+ ++  Q+ +     Q+A     + + +IV +Y  S  
Sbjct: 189 ATWQGVVKNYPQHPRAPEA--LLAIANNQLEQG----QKAA--AKKTLEQIVAQYGGSDV 240

Query: 175 VKGARFYVTVGR 186
            + A+  ++  +
Sbjct: 241 AQSAQSKLSQIK 252



 Score = 49.0 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 37/109 (33%), Gaps = 14/109 (12%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         + ++ +SPY   A++++           +   R      +Y  +   
Sbjct: 145 GDFKNAAASFRSFIAKFPSSPYQPTAQYWL--------GNALYALR------DYKGSTAT 190

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +Q V+ NY     A EA+  +    +       A++ +  I  +Y    
Sbjct: 191 WQGVVKNYPQHPRAPEALLAIANNQLEQGQKAAAKKTLEQIVAQYGGSD 239



 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 50/132 (37%), Gaps = 22/132 (16%)

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           Q+  G ++ AA+    +I ++P S       Y +G +   +        R  K       
Sbjct: 141 QFRNGDFKNAAASFRSFIAKFPSSPYQPTAQYWLGNALYAL--------RDYKGSTATWQ 192

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
            +V+ Y   P    A               + I    L++G+  AA    + ++A Y  +
Sbjct: 193 GVVKNYPQHPRAPEAL--------------LAIANNQLEQGQKAAAKKTLEQIVAQYGGS 238

Query: 224 EHAEEAMARLVE 235
           + A+ A ++L +
Sbjct: 239 DVAQSAQSKLSQ 250


>gi|315224829|ref|ZP_07866650.1| TPR-domain containing protein [Capnocytophaga ochracea F0287]
 gi|314945232|gb|EFS97260.1| TPR-domain containing protein [Capnocytophaga ochracea F0287]
          Length = 1001

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 71/213 (33%), Gaps = 25/213 (11%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAG 108
           +     Y +  Y  A     ++N++ A   F +  +  P  +     ++L  A   +  G
Sbjct: 492 APKTEEYAKGFYGLAYANFNQKNYAGAIANFEKYLKQNPKNSSWKHDAILRLADSYFVTG 551

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           KY  A     + I    +S + DY  Y   +SY  + R            ++ + R V+ 
Sbjct: 552 KYWPAMEGYNKLIEA--KSSDQDYAAYQKAISYGFVDRLNSK--------IEDLERFVKN 601

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y +S     A                E+G  Y+ +G     +  +Q +   Y        
Sbjct: 602 YKSSNLRPNAL--------------FELGNAYVTKGNTQKGLQYYQQLAKEYKGNVLVPR 647

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           AM R    Y       +A  +   I + YP   
Sbjct: 648 AMLREGLVYYNRNENQKALTLFQTIAKDYPNTN 680



 Score = 39.7 bits (92), Expect = 0.44,   Method: Composition-based stats.
 Identities = 35/247 (14%), Positives = 78/247 (31%), Gaps = 48/247 (19%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           +   D      Y++  + + +    E  +++A +Y  +       + +A ++   +    
Sbjct: 413 EKSNDPKDKETYKKVAFYRGLELFNELQYNEALKYLQKAIGGN--SALAARATYWAGETA 470

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
           Y    Y+ A S   +++      K  +Y   +Y  G++YA       ++Q+     +   
Sbjct: 471 YQLKDYKGAESYFTQFLHNSSAPKTEEYAKGFY--GLAYAN------FNQKNYAGAIANF 522

Query: 163 SRIVERYT-NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG----------------E 205
            + +++   NS +   A          LA      G+Y+                     
Sbjct: 523 EKYLKQNPKNSSWKHDAILR-------LADSYFVTGKYWPAMEGYNKLIEAKSSDQDYAA 575

Query: 206 YVAAIPR------------FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           Y  AI               +  + NY  +     A+  L  AYV      +  +    +
Sbjct: 576 YQKAISYGFVDRLNSKIEDLERFVKNYKSSNLRPNALFELGNAYVTKGNTQKGLQYYQQL 635

Query: 254 QERYPQG 260
            + Y   
Sbjct: 636 AKEYKGN 642



 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 85/228 (37%), Gaps = 44/228 (19%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
              ++E    ++ + N  K  +Y+ Q ++++    +  +++L    V Y+  + Q+A +L
Sbjct: 609 PNALFELGNAYVTKGNTQKGLQYYQQLAKEYKGNVLVPRAMLREGLVYYNRNENQKALTL 668

Query: 117 GEEYITQYPESKNV------------------DYVYYLVGMSYAQMIR-----------D 147
            +     YP +                     +Y  +  G+ Y ++             +
Sbjct: 669 FQTIAKDYPNTNEASQAVASAKLIYVDMGNVNEYASWAKGLGYVEVTDLELEGATYEAAE 728

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
             Y Q  TK  +    + ++ + N      A              E  +G+ Y   G+  
Sbjct: 729 RQYMQNNTKEAISGFEKYLKEFPNGMRRTNA--------------EFYLGQMYFNSGQKS 774

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
            A+  ++ V  + S+ E+ E+++ R+ +  +      +A+  +  ++ 
Sbjct: 775 KALTHYENVTKSGSN-EYGEQSLTRVCQILLEAGSYLKAKPYLEDLER 821


>gi|83943920|ref|ZP_00956377.1| hypothetical protein EE36_09755 [Sulfitobacter sp. EE-36]
 gi|83954493|ref|ZP_00963204.1| hypothetical protein NAS141_14768 [Sulfitobacter sp. NAS-14.1]
 gi|83840777|gb|EAP79948.1| hypothetical protein NAS141_14768 [Sulfitobacter sp. NAS-14.1]
 gi|83845167|gb|EAP83047.1| hypothetical protein EE36_09755 [Sulfitobacter sp. EE-36]
          Length = 283

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 42/120 (35%), Gaps = 10/120 (8%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY-QQAASLGEE 119
           +E+A   L + +F  A + F   ++ +P   +  ++ L         G   + A +    
Sbjct: 164 FERAKAALADGDFRSAADQFATFNQTYPGGPLGPEADLRRGDALDGLGDTREAARAYLAS 223

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           +    P         Y +G S   +          T+     +  +  R+  SP+V  A+
Sbjct: 224 FSAD-PAGPVAAEALYQLGSSLGAL--------GQTQEACVTLGEVASRFPTSPFVAQAQ 274



 Score = 38.6 bits (89), Expect = 0.86,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 33/111 (29%), Gaps = 16/111 (14%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA-KEVEIGRYYLKRGEYVAAIP 211
              +      +   + Y   P    A        + L   +E    R       Y+A+  
Sbjct: 174 GDFRSAADQFATFNQTYPGGPLGPEADLRRGDALDGLGDTRE--AAR------AYLAS-- 223

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
                 +       A EA+ +L  +  AL    EA   +  +  R+P   +
Sbjct: 224 -----FSADPAGPVAAEALYQLGSSLGALGQTQEACVTLGEVASRFPTSPF 269


>gi|320107210|ref|YP_004182800.1| transporter auxiliary protein [Terriglobus saanensis SP1PR4]
 gi|319925731|gb|ADV82806.1| transporter auxiliary protein, TonB-ExbB-ExbD/TolA-TolQ-TolR (TonB)
           family [Terriglobus saanensis SP1PR4]
          Length = 314

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 52/125 (41%), Gaps = 8/125 (6%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           R++Y+ A        ++ A   F    + +P   +A  +      + Y AGK+  AA   
Sbjct: 187 RDLYQTAYGDFVGAKYTLASAEFGDVVKFYPDDPLAGNAYFYLGEIDYKAGKFNSAAKNY 246

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           +  + QYP +  +   +   G S   + ++        +  ++ +  +++R+ NSP    
Sbjct: 247 DHVLEQYPGNAKIPVSHLRKGQSLIALKQN--------EAGIRELRSLIQRFPNSPEATQ 298

Query: 178 ARFYV 182
           AR  +
Sbjct: 299 ARSKL 303



 Score = 40.9 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 35/105 (33%), Gaps = 14/105 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
           L       +V+ Y + P    A FY+                   K G++ +A   +  V
Sbjct: 204 LASAEFGDVVKFYPDDPLAGNAYFYLGEID--------------YKAGKFNSAAKNYDHV 249

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           L  Y        +  R  ++ +AL   +     +  + +R+P   
Sbjct: 250 LEQYPGNAKIPVSHLRKGQSLIALKQNEAGIRELRSLIQRFPNSP 294


>gi|212692725|ref|ZP_03300853.1| hypothetical protein BACDOR_02223 [Bacteroides dorei DSM 17855]
 gi|212664661|gb|EEB25233.1| hypothetical protein BACDOR_02223 [Bacteroides dorei DSM 17855]
          Length = 967

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 72/222 (32%), Gaps = 46/222 (20%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D          +YE+   F++ ++ + A   FN   + FP + VAR++      + Y   
Sbjct: 574 DYPESQYMDDALYEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAANEIGLLYYQDD 633

Query: 109 KYQQAASLGEEYITQYPESKNV------------------DYVYYLVGMSYAQMIRDVPY 150
           KY +A    ++ I  YP S+                    +Y  +   +           
Sbjct: 634 KYPEAIQAYKQVIASYPGSEEARLAQRDLKSIYIDLNKVDEYANFASTIPGGANFDVNER 693

Query: 151 D------------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           D            +          +R ++ +    +   A +Y+ +              
Sbjct: 694 DSLTYVAAERVYMRGEVTEARNSFTRYLQTFPEGAFSLNANYYIGLID------------ 741

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE-AYVA 239
               +  Y +A      VL  Y + +++E+AM    E AY A
Sbjct: 742 --YNQKAYESAARHLDKVLE-YPNNKYSEDAMLMGAEMAYTA 780



 Score = 62.1 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 74/214 (34%), Gaps = 26/214 (12%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLG 117
           +Y     + K++N+  A  +F +          A ++          +   +++QA    
Sbjct: 474 LYNLGYTYFKQKNYGNAGTWFTRFVDRGSANERAMQADAYNRIGDCNFYDRRFEQARQDY 533

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
              +   P     DY  Y         +R +  D       +Q ++R++  Y  S Y+  
Sbjct: 534 ARAVEIDPS--LGDYSLYQEA-----FVRGLQRD---YNGKVQTLNRLISDYPESQYMDD 583

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           A                E GR +++  +   AI RF +++  + ++  A  A   +   Y
Sbjct: 584 AL--------------YEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAANEIGLLY 629

Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
                  EA +    +   YP    AR  +  +K
Sbjct: 630 YQDDKYPEAIQAYKQVIASYPGSEEARLAQRDLK 663



 Score = 40.1 bits (93), Expect = 0.37,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 75/248 (30%), Gaps = 52/248 (20%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +  L +   +  C L G  +Q +           R  RE   K    +         E
Sbjct: 1   MKRKTLLMAALMGGCSLQGMAQQITPKDVAGDKEYNRVCREYELKGGDSM---------E 51

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +P +    + L + A   +  GKY++A +L                      
Sbjct: 52  LLQAYLDKYPDSRHKNRVLSLIASAYFMEGKYKEAIALFRS------------------- 92

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL------AAK 192
               + + D   D  A +L   Y+            ++ A  + T+ +         A  
Sbjct: 93  -CDLEALPDKERDDCAMRLATSYLKE--------DNLREAAVWFTLLKEVSPLYQDDAVY 143

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM--ARLVEAYVALALMDEAREVV 250
            +    Y  KR  Y  A+  FQ +  +         A+    + E Y+      +AR V 
Sbjct: 144 NLAYIDYVEKR--YDKALKSFQSLQND-----AVYAALVPYYIGEIYLVKGNYQQARTVA 196

Query: 251 SLIQERYP 258
               E+YP
Sbjct: 197 KAYLEQYP 204



 Score = 37.8 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 29/59 (49%), Gaps = 1/59 (1%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y   ++   ++ +  A  + ++    +P    +  ++LM A + Y+A  Y++A  + ++
Sbjct: 735 YYIGLIDYNQKAYESAARHLDKVLE-YPNNKYSEDAMLMGAEMAYTAKDYEKALHIYKQ 792



 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 76/232 (32%), Gaps = 29/232 (12%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A         ++A   F +  + FP    +  +      + Y+   Y+ AA   ++ 
Sbjct: 698 YVAAERVYMRGEVTEARNSFTRYLQTFPEGAFSLNANYYIGLIDYNQKAYESAARHLDKV 757

Query: 121 ITQYPESKNVDYVY------------YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +  YP +K  +               Y   +   + ++D        +L    M R    
Sbjct: 758 LE-YPNNKYSEDAMLMGAEMAYTAKDYEKALHIYKQLKDKAASMERRQLAKTGMLRSAHM 816

Query: 169 YTNSPYVKGARFYVTVGRNQLAAK----EVEIGRYYLKRGEYVAAIP--RFQLVLANY-S 221
             N   +      +    + LA      E+    +Y +   Y+ A    R    L     
Sbjct: 817 LGNEEEI------IFTATDLLADTKLAPELSNEAHYYRAKAYLDAGKTDRAMEDLKILAK 870

Query: 222 DAEHAE--EAMARLVEAYVALALMDEA-REVVSLIQERYPQGYWARYVETLV 270
           D  +    EA  ++ + Y      D+A +EV++ I+   P  YW      L+
Sbjct: 871 DTRNVYGAEAKYKVAQIYFDGGQTDKAEQEVLNYIEVSTPHTYWLARSFVLL 922



 Score = 36.2 bits (83), Expect = 5.4,   Method: Composition-based stats.
 Identities = 20/153 (13%), Positives = 45/153 (29%), Gaps = 24/153 (15%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +YE  + +     +SKA     + +       +++ + L       +  +  +A    E+
Sbjct: 248 LYELGMSYYYTGVYSKAAATLGEMASVH--DALSQNAYLHMGLAYLNLKERNRARMAFEQ 305

Query: 120 YITQYPESKNV-DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
               +     V +   Y   +   +               +    R +  + NSPY +  
Sbjct: 306 -AANFSFDPKVKEQALYNYALCIHETSYS------PFAESVTVFERFLNEFPNSPYTERV 358

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
             Y+                 Y+    Y AA+ 
Sbjct: 359 NDYLIEV--------------YMNTRSYEAALK 377


>gi|213027104|ref|ZP_03341551.1| hypothetical protein Salmonelentericaenterica_33679 [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 262

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 50/156 (32%), Gaps = 9/156 (5%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89
           +        R   R   L +          Y  A+  +++++    A   F    + +P 
Sbjct: 115 SGAATAADPRSGCRYGNLRAPVQSGDANTDYNAAIALVQDKSRQDDAIVAFQNFIKKYPD 174

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +     +      + Y+ GK   AA      +  YP+S       Y VG+        + 
Sbjct: 175 STYQPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGV--------IM 226

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            D+  T        +++ +Y  +   K A+  +   
Sbjct: 227 QDKGDTAKAKAVYQQVINKYPGTDGAKQAQKRLNAM 262



 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      +++Y +S Y   A +++               
Sbjct: 141 ANTDYNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLN----------- 189

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
                +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 190 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVINKY 246

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 247 PGTDGAKQAQK 257



 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I +YP+S       Y +G       +              Y + +V+ Y 
Sbjct: 159 DDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 210

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A + V V                  +G+   A   +Q V+  Y   + A++A 
Sbjct: 211 KSPKAADAMYKVGVIMQ--------------DKGDTAKAKAVYQQVINKYPGTDGAKQAQ 256

Query: 231 ARL 233
            RL
Sbjct: 257 KRL 259


>gi|298529948|ref|ZP_07017350.1| tol-pal system protein YbgF [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298509322|gb|EFI33226.1| tol-pal system protein YbgF [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 245

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 51/129 (39%), Gaps = 15/129 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
                ++ +D++  +   Q     ++ Y   P    A +++                +Y+
Sbjct: 129 YNQALELYFDEQ-AEQARQAFREFIDTYPEHPLAPNAWYWLAET-------------FYM 174

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +  EY  +I  F+ VL ++ +   A +A+ ++  AY  L     AR  + ++ E YP+  
Sbjct: 175 E-KEYPQSILTFRQVLEHFPEDPKAPDALLKIGYAYKRLEDKRNARFYLGVLLEDYPESS 233

Query: 262 WARYVETLV 270
            A      +
Sbjct: 234 AADKARETL 242



 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 48/141 (34%), Gaps = 8/141 (5%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
               +        +++Y +A+    ++   +A + F +    +P   +A  +    A   
Sbjct: 113 KNEKEPDKPASEAKQLYNQALELYFDEQAEQARQAFREFIDTYPEHPLAPNAWYWLAETF 172

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y   +Y Q+     + +  +PE          +G +Y ++           +    Y+  
Sbjct: 173 YMEKEYPQSILTFRQVLEHFPEDPKAPDALLKIGYAYKRLEDK--------RNARFYLGV 224

Query: 165 IVERYTNSPYVKGARFYVTVG 185
           ++E Y  S     AR  +   
Sbjct: 225 LLEDYPESSAADKARETLDSL 245



 Score = 36.6 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 30/93 (32%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
            RQ+ R+               Y  A  F  E+ + ++   F Q    FP    A  +LL
Sbjct: 144 ARQAFREFIDTYPEHPLAPNAWYWLAETFYMEKEYPQSILTFRQVLEHFPEDPKAPDALL 203

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
              +        + A       +  YPES   D
Sbjct: 204 KIGYAYKRLEDKRNARFYLGVLLEDYPESSAAD 236


>gi|254522781|ref|ZP_05134836.1| putative secreted protein [Stenotrophomonas sp. SKA14]
 gi|219720372|gb|EED38897.1| putative secreted protein [Stenotrophomonas sp. SKA14]
          Length = 272

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 46/137 (33%), Gaps = 8/137 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S+     +R  Y  A   LK   +  + + F    + +P    A  +L       Y+   
Sbjct: 138 SLAATGDERTSYNVAFESLKAGKYDDSAQLFLSFLQLYPNGVYAPNALYWLGESYYATRN 197

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           +  A +   E +++YP           VG+S           +       Q +  +V +Y
Sbjct: 198 FPMAETQFRELLSRYPTHDKAAGGLLKVGLSQY--------GEGKVDQAQQTLETVVAQY 249

Query: 170 TNSPYVKGARFYVTVGR 186
             S   + A+  +   R
Sbjct: 250 PGSDAARTAQDRLQSIR 266



 Score = 45.5 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 43/115 (37%), Gaps = 14/115 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              Q     ++ Y N  Y   A +++              G  Y     +  A  +F+ +
Sbjct: 163 DSAQLFLSFLQLYPNGVYAPNALYWL--------------GESYYATRNFPMAETQFREL 208

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           L+ Y   + A   + ++  +      +D+A++ +  +  +YP    AR  +  ++
Sbjct: 209 LSRYPTHDKAAGGLLKVGLSQYGEGKVDQAQQTLETVVAQYPGSDAARTAQDRLQ 263



 Score = 43.6 bits (102), Expect = 0.030,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 45/140 (32%), Gaps = 22/140 (15%)

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
            ++    AF    AGKY  +A L   ++  YP         Y +G SY            
Sbjct: 145 ERTSYNVAFESLKAGKYDDSAQLFLSFLQLYPNGVYAPNALYWLGESYYATRNFPM---- 200

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
                      ++ RY                 ++ A   +++G      G+   A    
Sbjct: 201 ----AETQFRELLSRYPT--------------HDKAAGGLLKVGLSQYGEGKVDQAQQTL 242

Query: 214 QLVLANYSDAEHAEEAMARL 233
           + V+A Y  ++ A  A  RL
Sbjct: 243 ETVVAQYPGSDAARTAQDRL 262


>gi|325522841|gb|EGD01310.1| tol-pal system protein YbgF [Burkholderia sp. TJI49]
          Length = 249

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 45/137 (32%), Gaps = 8/137 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
             T    + +    A    +  NF  A   F      +P +     +       QY+   
Sbjct: 121 EGTVQPGETDALSAAQQQFRNGNFKAAAASFRSFIAKYPQSPYQPTAQYWLGNAQYALRD 180

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y+ + +  +  +++YP+          +G         +   Q+A     +   ++V +Y
Sbjct: 181 YRGSTATWQAIVSKYPQHPRAADALVAIG------TNQLEQGQKAA--AKKTFEQVVSQY 232

Query: 170 TNSPYVKGARFYVTVGR 186
             S   + A+  +   +
Sbjct: 233 AGSNAAQTAQGKLETIK 249



 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/109 (12%), Positives = 35/109 (32%), Gaps = 14/109 (12%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         + +Y  SPY   A++++       A   +          +Y  +   
Sbjct: 142 GNFKAAAASFRSFIAKYPQSPYQPTAQYWLGN-----AQYAL---------RDYRGSTAT 187

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +Q +++ Y     A +A+  +    +       A++    +  +Y    
Sbjct: 188 WQAIVSKYPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYAGSN 236



 Score = 38.9 bits (90), Expect = 0.73,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 25/66 (37%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +   +   + G + AA   F+  +A Y  + +   A   L  A  AL     +      I
Sbjct: 132 LSAAQQQFRNGNFKAAAASFRSFIAKYPQSPYQPTAQYWLGNAQYALRDYRGSTATWQAI 191

Query: 254 QERYPQ 259
             +YPQ
Sbjct: 192 VSKYPQ 197


>gi|303248292|ref|ZP_07334554.1| tol-pal system protein YbgF [Desulfovibrio fructosovorans JJ]
 gi|302490317|gb|EFL50229.1| tol-pal system protein YbgF [Desulfovibrio fructosovorans JJ]
          Length = 413

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 36/108 (33%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           K A      +A+    G  + +       +         +Y          ++  A   F
Sbjct: 292 KAAYNRALQLAINGNAGAAKAAFEQFLAANPKSPLAPNALYWVGEGAFSSGDYKTAIGDF 351

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
            + ++ +P    A  +L   A  Q   G   +A +  E Y+  YP ++
Sbjct: 352 EKVAKGWPGHSKAADALYKMAMAQEKTGDTAEARASYERYLKDYPNAE 399



 Score = 46.3 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 42/134 (31%), Gaps = 8/134 (5%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           T    ++  Y +A+      N   A   F Q     P + +A  +L       +S+G Y+
Sbjct: 286 TASPAEKAAYNRALQLAINGNAGAAKAAFEQFLAANPKSPLAPNALYWVGEGAFSSGDYK 345

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            A    E+    +P         Y + M+  +           T        R ++ Y N
Sbjct: 346 TAIGDFEKVAKGWPGHSKAADALYKMAMAQEKT--------GDTAEARASYERYLKDYPN 397

Query: 172 SPYVKGARFYVTVG 185
           +      R  +   
Sbjct: 398 AELAGLVRQKLQTL 411



 Score = 42.4 bits (99), Expect = 0.069,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 31/100 (31%), Gaps = 14/100 (14%)

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
             + +     SP    A ++              +G      G+Y  AI  F+ V   + 
Sbjct: 314 FEQFLAANPKSPLAPNALYW--------------VGEGAFSSGDYKTAIGDFEKVAKGWP 359

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
               A +A+ ++  A        EAR       + YP   
Sbjct: 360 GHSKAADALYKMAMAQEKTGDTAEARASYERYLKDYPNAE 399


>gi|322833829|ref|YP_004213856.1| tol-pal system protein YbgF [Rahnella sp. Y9602]
 gi|321169030|gb|ADW74729.1| tol-pal system protein YbgF [Rahnella sp. Y9602]
          Length = 263

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/148 (15%), Positives = 51/148 (34%), Gaps = 9/148 (6%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVL-FLKEQNFSKAYEYFNQCSRDFPFAGVAR 94
            G    +       +          Y  AV   L+++ + +A   F    + +P +    
Sbjct: 121 SGSAATTPDAGAAQAPASTGDVNSDYNAAVSLALEKKQYDEAIAAFQSFVKKYPDSTYQP 180

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
            +      + Y+ GK   AA      +  YP+S       + VG+        +  ++  
Sbjct: 181 NANYWLGQLYYNKGKKDDAAYYFAVVVKNYPKSPKSSDAMFKVGV--------IMQEKGQ 232

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYV 182
                   +++V++Y N+   K A+  +
Sbjct: 233 ADKAKAVFAQVVKQYPNTDAAKQAQKRL 260



 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 51/129 (39%), Gaps = 14/129 (10%)

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           S       +  +++     +      V++Y +S Y   A +++              G+ 
Sbjct: 144 SDYNAAVSLALEKKQYDEAIAAFQSFVKKYPDSTYQPNANYWL--------------GQL 189

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           Y  +G+   A   F +V+ NY  +  + +AM ++          D+A+ V + + ++YP 
Sbjct: 190 YYNKGKKDDAAYYFAVVVKNYPKSPKSSDAMFKVGVIMQEKGQADKAKAVFAQVVKQYPN 249

Query: 260 GYWARYVET 268
              A+  + 
Sbjct: 250 TDAAKQAQK 258



 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 47/126 (37%), Gaps = 22/126 (17%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +Y +A +  + ++ +YP+S       Y +G  Y    +              Y + +V+
Sbjct: 157 KQYDEAIAAFQSFVKKYPDSTYQPNANYWLGQLYYNKGKKDD--------AAYYFAVVVK 208

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y  SP    A F V V                 ++G+   A   F  V+  Y + + A+
Sbjct: 209 NYPKSPKSSDAMFKVGVIMQ--------------EKGQADKAKAVFAQVVKQYPNTDAAK 254

Query: 228 EAMARL 233
           +A  RL
Sbjct: 255 QAQKRL 260


>gi|94268878|ref|ZP_01291311.1| TPR repeat [delta proteobacterium MLMS-1]
 gi|93451429|gb|EAT02275.1| TPR repeat [delta proteobacterium MLMS-1]
          Length = 374

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 45/125 (36%), Gaps = 8/125 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y++    L+E ++ +AY+  ++   +      A  +  +     Y  G+Y+ A    +  
Sbjct: 258 YQQGKNHLEEGDYRQAYDLLSRHLEETATGDQAADTRFLLGESLYGQGEYELAILEYQRV 317

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           I ++P    +       GM++ ++        R          R+   + +S     AR 
Sbjct: 318 IAEFPNHDRIPRALLRQGMAFEEL--------REPSTATIIYERLAGDHPDSEEAAQARQ 369

Query: 181 YVTVG 185
            +   
Sbjct: 370 RLQEM 374


>gi|325104639|ref|YP_004274293.1| Tetratricopeptide TPR_1 repeat-containing protein [Pedobacter
           saltans DSM 12145]
 gi|324973487|gb|ADY52471.1| Tetratricopeptide TPR_1 repeat-containing protein [Pedobacter
           saltans DSM 12145]
          Length = 1008

 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 67/212 (31%), Gaps = 25/212 (11%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y      L+ +N+ KA  Y ++    +         + L  A   + +  Y  A S    
Sbjct: 518 YALGYAALEGENYGKAATYLDKFLKGNEKDQSTINDATLRLADAYFGSKNYGAALSYYNR 577

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            I     S+  DY  +  G+    M      +Q  TK+    +  ++ ++ NS Y   A 
Sbjct: 578 IIASKTSSE--DYALFQRGVIEGLM------NQPDTKIA--TLQSLLNKFPNSNYADDAG 627

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                          EI   Y   G+   +      ++  Y  + +   A+  +   Y  
Sbjct: 628 --------------FEIAYTYFLIGQGEKSRSDLVALIEKYPRSSYVPRALVTIGLVYYD 673

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLVK 271
                 A +    +   Y     A+    L++
Sbjct: 674 QQNDAAALDAFKKVVSEYKSTDEAQQAIKLIE 705



 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 62/209 (29%), Gaps = 36/209 (17%)

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
                     FP +  A  +    A+  +  G+ +++ S     I +YP S  V      
Sbjct: 607 IATLQSLLNKFPNSNYADDAGFEIAYTYFLIGQGEKSRSDLVALIEKYPRSSYVPRALVT 666

Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN--------- 187
           +G+ Y         DQ+     L    ++V  Y ++   + A   +              
Sbjct: 667 IGLVYY--------DQQNDAAALDAFKKVVSEYKSTDEAQQAIKLIERIYIDSGNATGFI 718

Query: 188 -----------QLAAKE---VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
                       +A ++    +       RG++  A+         +  A   ++A    
Sbjct: 719 DYANTTSIGNYTVAEQDNIMFQAANARYLRGDWNGAVESINAYFDKFPKAIQDKQAKFIR 778

Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYW 262
            E+Y  L          ++I   Y    W
Sbjct: 779 AESYKNLGKY-----APAIIDYEYILNDW 802



 Score = 39.7 bits (92), Expect = 0.41,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 43/115 (37%), Gaps = 18/115 (15%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSR-DFPFAGVARK----SLLMSAFVQYSAG-----KY 110
           Y+ A+  L++  ++ A   F    + ++  +  A      S +      Y A      K 
Sbjct: 32  YKNALELLEKGKYATASSLFRDVEKLNYTTSEQADNRVDISEIKINAQYYRALCALELKN 91

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
             A  L   +I Q+PES      Y+ VG  Y +        Q   K  L + +++
Sbjct: 92  DDAIDLFLSFIRQHPESAKTKQAYFQVGRYYFR--------QANYKEALNWFTKV 138


>gi|38637810|ref|NP_942784.1| hypothetical protein PHG146 [Ralstonia eutropha H16]
 gi|32527148|gb|AAP85898.1| conserved hypothetical protein [Ralstonia eutropha H16]
          Length = 166

 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 50/141 (35%), Gaps = 8/141 (5%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
           V     T    ++  Y+ A+   +  +F  A   F+   + +P +     +        Y
Sbjct: 34  VEDRQGTSQPGEKPEYDAALKHFQAGDFKSAGNAFSSFIKKYPQSPYLPLAQYWLGNSLY 93

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
           +   Y+ +  +  + I   P    V     ++ ++  Q+       Q+A     + + ++
Sbjct: 94  AQRDYKGSTWVLHKMIDANPRHPKVPDA--MIAVANNQLESG----QKAAGR--ETLEQV 145

Query: 166 VERYTNSPYVKGARFYVTVGR 186
           V +Y  +   + A   +   +
Sbjct: 146 VAKYPGTEGARAADNRLKTLK 166



 Score = 40.5 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 40/119 (33%), Gaps = 14/119 (11%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K      S  +++Y  SPY+  A++++           +   R Y K   +V     
Sbjct: 59  GDFKSAGNAFSSFIKKYPQSPYLPLAQYWL--------GNSLYAQRDY-KGSTWV----- 104

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
              ++          +AM  +    +        RE +  +  +YP    AR  +  +K
Sbjct: 105 LHKMIDANPRHPKVPDAMIAVANNQLESGQKAAGRETLEQVVAKYPGTEGARAADNRLK 163


>gi|58581293|ref|YP_200309.1| hypothetical protein XOO1670 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84623211|ref|YP_450583.1| hypothetical protein XOO_1554 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|58425887|gb|AAW74924.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84367151|dbj|BAE68309.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 272

 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 43/130 (33%), Gaps = 8/130 (6%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           +R  Y  A   LK   +  A + F      +P       +L       Y+   +Q A + 
Sbjct: 145 ERTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQ 204

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
             + +++YP           +G+S     ++            + +  +  +Y  S   +
Sbjct: 205 FRDLVSRYPTHDKAAGGLLKLGLSQYGEGKN--------NEAQRTLQHVASQYPGSDAAR 256

Query: 177 GARFYVTVGR 186
            A+  +   R
Sbjct: 257 VAQERLQSIR 266



 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 41/115 (35%), Gaps = 14/115 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              Q     +E Y N  Y   A +++              G  Y     +  A  +F+ +
Sbjct: 163 DASQLFLSFLELYPNGVYTPNALYWL--------------GESYYATRNFQLAEAQFRDL 208

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           ++ Y   + A   + +L  +       +EA+  +  +  +YP    AR  +  ++
Sbjct: 209 VSRYPTHDKAAGGLLKLGLSQYGEGKNNEAQRTLQHVASQYPGSDAARVAQERLQ 263



 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 23/58 (39%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           LK G+Y  A   F   L  Y +  +   A+  L E+Y A      A      +  RYP
Sbjct: 156 LKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYP 213


>gi|298529295|ref|ZP_07016698.1| tol-pal system protein YbgF [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298510731|gb|EFI34634.1| tol-pal system protein YbgF [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 292

 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 65/143 (45%), Gaps = 10/143 (6%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
           S D  L+ V D +  R +Y++A+    ++ + +A   + + + ++P   +   +      
Sbjct: 156 SDDPDLEPVGDPQTARALYQRALDSFYDREYERAQSLWEEFAENYPEHDLISNAYFWQGE 215

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY- 161
             Y   +Y +AA   +E I+ YP+S  +       GMS+ ++ R         +   Q  
Sbjct: 216 SFYQMQEYAEAALAYQEVISNYPDSNKITASMLKQGMSFIELGR---------EEAGQLV 266

Query: 162 MSRIVERYTNSPYVKGARFYVTV 184
           ++ ++E Y +S   + AR +++ 
Sbjct: 267 LNELLEEYPDSAEARRARAFISE 289



 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 47/145 (32%), Gaps = 22/145 (15%)

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
                    Y   +       D  YD R  +          E Y     +  A F+    
Sbjct: 165 GDPQTARALYQRAL-------DSFYD-REYERAQSLWEEFAENYPEHDLISNAYFWQ--- 213

Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
                      G  + +  EY  A   +Q V++NY D+     +M +   +++ L   + 
Sbjct: 214 -----------GESFYQMQEYAEAALAYQEVISNYPDSNKITASMLKQGMSFIELGREEA 262

Query: 246 AREVVSLIQERYPQGYWARYVETLV 270
            + V++ + E YP    AR     +
Sbjct: 263 GQLVLNELLEEYPDSAEARRARAFI 287


>gi|188577426|ref|YP_001914355.1| tol-pal system protein YbgF, putative [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|188521878|gb|ACD59823.1| tol-pal system protein YbgF, putative [Xanthomonas oryzae pv.
           oryzae PXO99A]
          Length = 268

 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 43/130 (33%), Gaps = 8/130 (6%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           +R  Y  A   LK   +  A + F      +P       +L       Y+   +Q A + 
Sbjct: 141 ERTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQ 200

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
             + +++YP           +G+S     ++            + +  +  +Y  S   +
Sbjct: 201 FRDLVSRYPTHDKAAGGLLKLGLSQYGEGKN--------NEAQRTLQHVASQYPGSDAAR 252

Query: 177 GARFYVTVGR 186
            A+  +   R
Sbjct: 253 VAQERLQSIR 262



 Score = 45.9 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 41/115 (35%), Gaps = 14/115 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              Q     +E Y N  Y   A +++              G  Y     +  A  +F+ +
Sbjct: 159 DASQLFLSFLELYPNGVYTPNALYWL--------------GESYYATRNFQLAEAQFRDL 204

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           ++ Y   + A   + +L  +       +EA+  +  +  +YP    AR  +  ++
Sbjct: 205 VSRYPTHDKAAGGLLKLGLSQYGEGKNNEAQRTLQHVASQYPGSDAARVAQERLQ 259



 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 23/58 (39%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           LK G+Y  A   F   L  Y +  +   A+  L E+Y A      A      +  RYP
Sbjct: 152 LKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYP 209


>gi|254458707|ref|ZP_05072131.1| competence lipoprotein [Campylobacterales bacterium GD 1]
 gi|207084473|gb|EDZ61761.1| competence lipoprotein [Campylobacterales bacterium GD 1]
          Length = 294

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 68/186 (36%), Gaps = 4/186 (2%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L   F ++   ++ +    S+++   +   V +    Y K V  + + +  KA  Y++  
Sbjct: 3   LKSSFFLSAFAVIIFFSGCSKELEEYNKPAVYW----YGKIVKNISDGDLEKADNYYSSL 58

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
             +   + +  ++ ++ A       +Y  +     EYI +Y  +   +   +L   S   
Sbjct: 59  QGEHIGSPLLPEATMILAIAHMYYEEYLLSEHFLNEYIKRYATANEKEDAEFLKIKSKYL 118

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
            + +   DQ   +  ++   +    Y NS Y        T      AA    I   Y++ 
Sbjct: 119 ALPNPRRDQALIEEAIKEAQKFKHNYPNSMYYAVVDTMQTRLYMAEAALNETIADLYVRL 178

Query: 204 GEYVAA 209
            +  +A
Sbjct: 179 DKPKSA 184



 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 10/84 (11%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA-YVAL-------ALMDE 245
           + I   Y    EY+ +       +  Y+ A   E+A    +++ Y+AL       AL++E
Sbjct: 75  LAIAHMYY--EEYLLSEHFLNEYIKRYATANEKEDAEFLKIKSKYLALPNPRRDQALIEE 132

Query: 246 AREVVSLIQERYPQGYWARYVETL 269
           A +     +  YP   +   V+T+
Sbjct: 133 AIKEAQKFKHNYPNSMYYAVVDTM 156


>gi|94987495|ref|YP_595428.1| hypothetical protein LI1053 [Lawsonia intracellularis PHE/MN1-00]
 gi|94731744|emb|CAJ55107.1| uncharacterized protein conserved in bacteria [Lawsonia
           intracellularis PHE/MN1-00]
          Length = 305

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 22/143 (15%), Positives = 54/143 (37%), Gaps = 10/143 (6%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
             Q++      +   +     +Y+  V    E+ + +A + F   +  +    +   +  
Sbjct: 166 GAQTNSQPKQSTPNKIDTATVLYDTGVKLFNERKYKEALQSFTDFTNTYGTHKLISNAWF 225

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
                 Y  G Y  AA   E+ I++YP+S  +   Y+   + + +            K  
Sbjct: 226 WRGEANYQLGSYPAAALDYEQVISKYPKSGKIVSCYFKQALCFYK---------TGKKDA 276

Query: 159 LQY-MSRIVERYTNSPYVKGARF 180
            ++ +  +++++  SP  K A+ 
Sbjct: 277 AKFRLEEVIKKFPTSPEAKRAKQ 299



 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 45/129 (34%), Gaps = 22/129 (17%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           ++  KY++A     ++   Y   K +   ++  G +  Q+         +         +
Sbjct: 195 FNERKYKEALQSFTDFTNTYGTHKLISNAWFWRGEANYQL--------GSYPAAALDYEQ 246

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           ++ +Y  S  +    F   +              +Y K G+  AA  R + V+  +  + 
Sbjct: 247 VISKYPKSGKIVSCYFKQALC-------------FY-KTGKKDAAKFRLEEVIKKFPTSP 292

Query: 225 HAEEAMARL 233
            A+ A   L
Sbjct: 293 EAKRAKQIL 301



 Score = 42.8 bits (100), Expect = 0.052,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 47/147 (31%), Gaps = 22/147 (14%)

Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
           P   +   V Y  G+            +R  K  LQ  +     Y     +  A F+   
Sbjct: 178 PNKIDTATVLYDTGVKLFN--------ERKYKEALQSFTDFTNTYGTHKLISNAWFWRGE 229

Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
              QL              G Y AA   ++ V++ Y  +        +    +      D
Sbjct: 230 ANYQL--------------GSYPAAALDYEQVISKYPKSGKIVSCYFKQALCFYKTGKKD 275

Query: 245 EAREVVSLIQERYPQGYWARYVETLVK 271
            A+  +  + +++P    A+  + ++K
Sbjct: 276 AAKFRLEEVIKKFPTSPEAKRAKQILK 302


>gi|159030624|emb|CAO88292.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 722

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 86/234 (36%), Gaps = 29/234 (12%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           +DV   +   +   R  Y  A+  L++     A +      + +P   +A + LL     
Sbjct: 72  KDVADANAPSLDRSRARYLLAMDLLRKYEGGPALKQLEGLEKQYP--VLAPQILLKQGRA 129

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM---SYAQ-MIRDVPYDQRATKLML 159
              +   ++A  + ++ I  YP+S  V   YY +G    SY + +++  P   R   L+ 
Sbjct: 130 HELSNDSERAREIWQKLIKTYPQSPVVAEAYYSLGKYDPSYQEKLLKQYPRHPRTLALIR 189

Query: 160 QYMSRIVERYTNSPYVKGARFY-----VTVGRNQLAA---KEVEIGRY------YLKRGE 205
           Q +    +++    +++ A+       +   R++L      ++    +      Y + G 
Sbjct: 190 QRLQENPDQFP--LWLQLAKANPFDPTLNQARDRLVKDYANQLTPADWAMIGAGYWQSGL 247

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           Y  A   +             E+A  R          + EAR     + + YPQ
Sbjct: 248 YEKAYKAYAKA------TPSPEQA-YRYARGLQIAKKLPEARSAYQKLIKTYPQ 294



 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 73/240 (30%), Gaps = 29/240 (12%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
           A+     W+       Y           + Y  A      +   +A   + +  + +P A
Sbjct: 236 AMIGAGYWQSGLYEKAYKAYAKATPSPEQAYRYARGLQIAKKLPEARSAYQKLIKTYPQA 295

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
                 LL  A         + A +  +  + Q+P+                +++     
Sbjct: 296 PETGLGLLRLA----QISPNRDAIAYLDRIVKQFPD--RAPEALEAKA----KLLNS--- 342

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
                +   Q    ++ +Y  S             R  +A +         K G+Y  A 
Sbjct: 343 --TNAQAASQTWQTLLNKYPKSDEAAD-------YRWLMAQRA-------AKSGDYAKAW 386

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
              Q +  N  D++ A +A   + +    L    EA++  +    R+P  Y+A     L+
Sbjct: 387 QWAQPIAVNNPDSQTAPKAAFWVGKWAQKLGKNQEAKQAFTYTISRHPHSYYAWRSAVLL 446


>gi|303326957|ref|ZP_07357399.1| TPR domain protein [Desulfovibrio sp. 3_1_syn3]
 gi|302862945|gb|EFL85877.1| TPR domain protein [Desulfovibrio sp. 3_1_syn3]
          Length = 406

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 42/133 (31%), Gaps = 8/133 (6%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
                 + +   Y+ A+      + ++    F +  + +P       +        Y+ G
Sbjct: 278 KPAASAKGEDAAYKAALKVALSGHSAEGISRFREFLQQYPQGRYTANAEYWIGECLYAQG 337

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
            Y++A +  +   T YP            GMS +++               Q    ++  
Sbjct: 338 NYKEALAQFQTVNTNYPRHHKNADALLKAGMSLSRLGDKPG--------AAQKYRTLLAD 389

Query: 169 YTNSPYVKGARFY 181
           + NS   + AR  
Sbjct: 390 FPNSEAARMARSR 402



 Score = 53.6 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 35/114 (30%), Gaps = 14/114 (12%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
             +   +      +++Y    Y   A +++                    +G Y  A+ +
Sbjct: 300 GHSAEGISRFREFLQQYPQGRYTANAEYWIGECL--------------YAQGNYKEALAQ 345

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
           FQ V  NY       +A+ +   +   L     A +    +   +P    AR  
Sbjct: 346 FQTVNTNYPRHHKNADALLKAGMSLSRLGDKPGAAQKYRTLLADFPNSEAARMA 399



 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 26/140 (18%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           A K+ L  A     +G   +  S   E++ QYP+ +      Y +G             Q
Sbjct: 289 AYKAALKVA----LSGHSAEGISRFREFLQQYPQGRYTANAEYWIGECLYA--------Q 336

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K  L     +   Y        A     +  ++L  K                A  +
Sbjct: 337 GNYKEALAQFQTVNTNYPRHHKNADALLKAGMSLSRLGDK--------------PGAAQK 382

Query: 213 FQLVLANYSDAEHAEEAMAR 232
           ++ +LA++ ++E A  A +R
Sbjct: 383 YRTLLADFPNSEAARMARSR 402



 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 24/79 (30%), Gaps = 14/79 (17%)

Query: 205 EYVAA------------IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
            Y AA            I RF+  L  Y    +   A   + E   A     EA      
Sbjct: 289 AYKAALKVALSGHSAEGISRFREFLQQYPQGRYTANAEYWIGECLYAQGNYKEALAQFQT 348

Query: 253 IQERYPQGYWARYVETLVK 271
           +   YP     +  + L+K
Sbjct: 349 VNTNYP--RHHKNADALLK 365


>gi|167041145|gb|ABZ05905.1| hypothetical protein ALOHA_HF4000001A02ctg1g30 [uncultured marine
           microorganism HF4000_001A02]
          Length = 161

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 47/132 (35%), Gaps = 8/132 (6%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA-GKYQQA 113
           +   +++ KA          +A E         P   ++  +  + A V Y     +  A
Sbjct: 22  KSAEDLFSKAEQKRNMGEAKEALELLKTIVDKHPEHEISPDAQYLIAEVYYRDMRDFTTA 81

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
                +   Q+P+SK V +  ++ G   A M+ D        +   +Y +  +E+Y N  
Sbjct: 82  IKQYGDLRIQFPDSKQVPFSLFMQGFISANMLADF-------EKAKEYYTEFLEKYPNHE 134

Query: 174 YVKGARFYVTVG 185
             +   F +   
Sbjct: 135 LYQSVGFELKYL 146



 Score = 42.0 bits (98), Expect = 0.089,   Method: Composition-based stats.
 Identities = 17/116 (14%), Positives = 43/116 (37%), Gaps = 14/116 (12%)

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
            +    K  L+ +  IV+++        A++ +                YY    ++  A
Sbjct: 35  RNMGEAKEALELLKTIVDKHPEHEISPDAQYLIAEV-------------YYRDMRDFTTA 81

Query: 210 IPRFQLVLANYSDAEHAEEAMARLV-EAYVALALMDEAREVVSLIQERYPQGYWAR 264
           I ++  +   + D++    ++      +   LA  ++A+E  +   E+YP     +
Sbjct: 82  IKQYGDLRIQFPDSKQVPFSLFMQGFISANMLADFEKAKEYYTEFLEKYPNHELYQ 137


>gi|222823961|ref|YP_002575535.1| conserved hypothetical lipoprotein [Campylobacter lari RM2100]
 gi|222539183|gb|ACM64284.1| conserved hypothetical lipoprotein [Campylobacter lari RM2100]
          Length = 218

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 74/187 (39%), Gaps = 7/187 (3%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K  +     IA  FL     + + D+Y  S  +       Y++ +  L+E+N   A +
Sbjct: 1   MKKLFIF-SLIIAGLFLGACSSKKAEDLYNLSSMEW------YQQIIKDLQEKNLEAADK 53

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
           ++   + +     +  ++LL+ A    S  +Y+ A    +EY+ ++ +S+NV Y+ YL  
Sbjct: 54  HYTSMAAEHIADPLLEQTLLILAQAHISEEEYEMANFYLDEYLNKFGDSQNVAYIRYLKI 113

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
            +          +Q      ++ +    + Y N  Y       +T     +   +  I  
Sbjct: 114 KAKFDSFAVPNRNQALMLKTIEEIKEYNQSYPNVQYNDLIDTMLTKFNLAVFYLDTSIAE 173

Query: 199 YYLKRGE 205
            Y K+  
Sbjct: 174 LYQKKNR 180


>gi|312171771|emb|CBX80029.1| Hypothetical protein ybgF precursor [Erwinia amylovora ATCC
           BAA-2158]
          Length = 259

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 44/137 (32%), Gaps = 9/137 (6%)

Query: 46  VYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
               + T        Y  AV   L+++ +  A   F    + +P +     +      + 
Sbjct: 127 AVASAPTQSGDANTDYNAAVALVLEKKQYDSAISAFQTFVKKYPESTYQPNANYWLGQLN 186

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y+ GK   AA      +  YP+S       + VG+   +                    +
Sbjct: 187 YNKGKKDDAAYYFATVVKMYPKSPKSADALFKVGVIMQEKGDKA--------KAKAVYQQ 238

Query: 165 IVERYTNSPYVKGARFY 181
           +++ Y +S   K A+  
Sbjct: 239 VIKLYPDSEAAKTAQKR 255



 Score = 48.6 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 37/111 (33%), Gaps = 14/111 (12%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
            +      V++Y  S Y   A +++                    +G+   A   F  V+
Sbjct: 158 AISAFQTFVKKYPESTYQPNANYWLGQLN--------------YNKGKKDDAAYYFATVV 203

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
             Y  +  + +A+ ++           +A+ V   + + YP    A+  + 
Sbjct: 204 KMYPKSPKSADALFKVGVIMQEKGDKAKAKAVYQQVIKLYPDSEAAKTAQK 254



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 44/122 (36%), Gaps = 22/122 (18%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +Y  A S  + ++ +YPES       Y +G       +              Y + +V+
Sbjct: 153 KQYDSAISAFQTFVKKYPESTYQPNANYWLGQLNYNKGKKDD--------AAYYFATVVK 204

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y  SP    A F V V                 ++G+   A   +Q V+  Y D+E A+
Sbjct: 205 MYPKSPKSADALFKVGVIMQ--------------EKGDKAKAKAVYQQVIKLYPDSEAAK 250

Query: 228 EA 229
            A
Sbjct: 251 TA 252



 Score = 40.9 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 28/66 (42%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           L++ +Y +AI  FQ  +  Y ++ +   A   L +        D+A    + + + YP+ 
Sbjct: 150 LEKKQYDSAISAFQTFVKKYPESTYQPNANYWLGQLNYNKGKKDDAAYYFATVVKMYPKS 209

Query: 261 YWARYV 266
             +   
Sbjct: 210 PKSADA 215


>gi|222054196|ref|YP_002536558.1| tol-pal system protein YbgF [Geobacter sp. FRC-32]
 gi|221563485|gb|ACM19457.1| tol-pal system protein YbgF [Geobacter sp. FRC-32]
          Length = 275

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 55/150 (36%), Gaps = 8/150 (5%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G++    +     +    +    +Y+K +  L++ +  K+ EY ++    FP   +A   
Sbjct: 134 GFDEFQKKMAEAKAAEAEQTPEALYQKGLETLRKGDPQKSREYLSRFLELFPKHDLAANV 193

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
                   YS  KY QA    +E I  Y  ++ +        M++ ++           K
Sbjct: 194 HYWLGETYYSEKKYDQAILEFQEIIKNYSGNEKIPAAMLKQAMAFKEL--------GDAK 245

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
                  ++ E Y ++   + A+  +   +
Sbjct: 246 SARYVYKKVAEDYPHTDEARIAKEKLKDLK 275



 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 48/141 (34%), Gaps = 22/141 (15%)

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
               Y  G+   +            +   +Y+SR +E +          +++        
Sbjct: 154 PEALYQKGLETLRK--------GDPQKSREYLSRFLELFPKHDLAANVHYWL-------- 197

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
                 G  Y    +Y  AI  FQ ++ NYS  E    AM +   A+  L     AR V 
Sbjct: 198 ------GETYYSEKKYDQAILEFQEIIKNYSGNEKIPAAMLKQAMAFKELGDAKSARYVY 251

Query: 251 SLIQERYPQGYWARYVETLVK 271
             + E YP    AR  +  +K
Sbjct: 252 KKVAEDYPHTDEARIAKEKLK 272



 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 50/130 (38%), Gaps = 22/130 (16%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
             G  Q++      ++  +P+      V+Y +G +Y    +   YDQ      +     I
Sbjct: 166 RKGDPQKSREYLSRFLELFPKHDLAANVHYWLGETYYSEKK---YDQ-----AILEFQEI 217

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           ++ Y+ +  +  A     + +  +A KE+   +         +A   ++ V  +Y   + 
Sbjct: 218 IKNYSGNEKIPAA-----MLKQAMAFKELGDAK---------SARYVYKKVAEDYPHTDE 263

Query: 226 AEEAMARLVE 235
           A  A  +L +
Sbjct: 264 ARIAKEKLKD 273


>gi|187479387|ref|YP_787412.1| hypothetical protein BAV2917 [Bordetella avium 197N]
 gi|115423974|emb|CAJ50527.1| putative exported protein [Bordetella avium 197N]
          Length = 228

 Score = 62.4 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 18/133 (13%), Positives = 47/133 (35%), Gaps = 8/133 (6%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
               ++  ++ A    ++  + +A E     +  +P + +A  +       +Y++  Y+ 
Sbjct: 104 GDPQEQAAFDGATDLYRKGQYKEAAESLAAFTALYPNSDLAPTAQFYLGSARYASRDYKG 163

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A       + + P++        ++  S  ++                 + RIV  Y NS
Sbjct: 164 AIEQLSNLLQKSPDNARAPDALLVIAGSQIELNNRAG--------AKTTLQRIVRDYPNS 215

Query: 173 PYVKGARFYVTVG 185
           P    A+  + + 
Sbjct: 216 PAANTAKSRLQLL 228



 Score = 45.5 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 41/116 (35%), Gaps = 14/116 (12%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           K   + ++     Y NS     A+FY+   R             Y  R  Y  AI +   
Sbjct: 125 KEAAESLAAFTALYPNSDLAPTAQFYLGSAR-------------YASRD-YKGAIEQLSN 170

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           +L    D   A +A+  +  + + L     A+  +  I   YP    A   ++ ++
Sbjct: 171 LLQKSPDNARAPDALLVIAGSQIELNNRAGAKTTLQRIVRDYPNSPAANTAKSRLQ 226


>gi|317052296|ref|YP_004113412.1| tetratricopeptide repeat-containing protein [Desulfurispirillum
           indicum S5]
 gi|316947380|gb|ADU66856.1| Tetratricopeptide TPR_1 repeat-containing protein
           [Desulfurispirillum indicum S5]
          Length = 293

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 47/129 (36%), Gaps = 8/129 (6%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
              +Y++A+ F +   F +A   F+Q  ++FP + +A  SL     + Y+   Y  A   
Sbjct: 171 PSPLYDQAMNFYRIGEFPQALIAFDQVFKNFPTSNLADNSLYWIGEIYYAQNDYVSAFEY 230

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            +    QYP+       Y   G +  +        Q      L  ++     + + P + 
Sbjct: 231 FDRVTRQYPDGSKTPDAYLKKGFALER--------QGKYAEALDVLNYTANMFPDHPVLP 282

Query: 177 GARFYVTVG 185
            A   +   
Sbjct: 283 LAEQMIRQL 291



 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 37/94 (39%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
             V+ +  T       +Y    ++  + ++  A+EYF++ +R +P       + L   F 
Sbjct: 195 DQVFKNFPTSNLADNSLYWIGEIYYAQNDYVSAFEYFDRVTRQYPDGSKTPDAYLKKGFA 254

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
               GKY +A  +       +P+   +     ++
Sbjct: 255 LERQGKYAEALDVLNYTANMFPDHPVLPLAEQMI 288



 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 37/133 (27%), Gaps = 22/133 (16%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
           L   A   Y  G++ QA    ++    +P S   D   Y +G  Y      V        
Sbjct: 174 LYDQAMNFYRIGEFPQALIAFDQVFKNFPTSNLADNSLYWIGEIYYAQNDYVS------- 226

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              +Y  R+  +Y +      A                       ++G+Y  A+      
Sbjct: 227 -AFEYFDRVTRQYPDGSKTPDAYLKKGFALE--------------RQGKYAEALDVLNYT 271

Query: 217 LANYSDAEHAEEA 229
              + D      A
Sbjct: 272 ANMFPDHPVLPLA 284



 Score = 42.4 bits (99), Expect = 0.067,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 34/104 (32%), Gaps = 16/104 (15%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE-IGRYYLKRGEYVAAIPRFQL 215
             L    ++ + +  S                LA   +  IG  Y  + +YV+A   F  
Sbjct: 189 QALIAFDQVFKNFPTS---------------NLADNSLYWIGEIYYAQNDYVSAFEYFDR 233

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           V   Y D     +A  +   A        EA +V++     +P 
Sbjct: 234 VTRQYPDGSKTPDAYLKKGFALERQGKYAEALDVLNYTANMFPD 277



 Score = 38.9 bits (90), Expect = 0.80,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 28/70 (40%), Gaps = 1/70 (1%)

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
            +Y + GE+  A+  F  V  N+  +  A+ ++  + E Y A      A E    +  +Y
Sbjct: 180 NFY-RIGEFPQALIAFDQVFKNFPTSNLADNSLYWIGEIYYAQNDYVSAFEYFDRVTRQY 238

Query: 258 PQGYWARYVE 267
           P G       
Sbjct: 239 PDGSKTPDAY 248


>gi|118594346|ref|ZP_01551693.1| TPR repeat [Methylophilales bacterium HTCC2181]
 gi|118440124|gb|EAV46751.1| TPR repeat [Methylophilales bacterium HTCC2181]
          Length = 293

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 19/140 (13%), Positives = 52/140 (37%), Gaps = 8/140 (5%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
             +  + D   +   Y++A   L+   + +A+  F++    +P A    ++     + Q+
Sbjct: 157 TEVPPLIDKNIEVAAYDEANALLRATKYQEAFIAFDRFISAYPKAEKIAEAKYNLGYAQF 216

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
           +   Y  A     + I  + +S  V    Y +     Q+ +             + +  +
Sbjct: 217 ALKNYNAAIKTYSKVIELHVDSAIVPESMYGIANCEIQLAK--------IGNAKKTLRDL 268

Query: 166 VERYTNSPYVKGARFYVTVG 185
           ++R+ N+  +  A+  +   
Sbjct: 269 MQRFPNAEIIPKAKTRLKAL 288



 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 43/116 (37%), Gaps = 14/116 (12%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           +       R +  Y  +  +  A++ +   +  L                Y AAI  +  
Sbjct: 185 QEAFIAFDRFISAYPKAEKIAEAKYNLGYAQFAL--------------KNYNAAIKTYSK 230

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           V+  + D+    E+M  +    + LA +  A++ +  + +R+P        +T +K
Sbjct: 231 VIELHVDSAIVPESMYGIANCEIQLAKIGNAKKTLRDLMQRFPNAEIIPKAKTRLK 286


>gi|227537433|ref|ZP_03967482.1| TPR domain protein [Sphingobacterium spiritivorum ATCC 33300]
 gi|227242707|gb|EEI92722.1| TPR domain protein [Sphingobacterium spiritivorum ATCC 33300]
          Length = 1040

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 64/210 (30%), Gaps = 31/210 (14%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++++ ++   + N S          + +P +  A        +  ++ G+Y QA S  + 
Sbjct: 620 LFQRGIIQGLQGNSSGKIATLQSVVQKYPKSNYADDVAFEIPYTYFTLGQYDQAISGLQS 679

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            + +YP S  V      +G+       +           L+   R+V++Y+ +   K A 
Sbjct: 680 MVEKYPRSSYVPRALVTIGLVQYNQDNN--------DAALKTFQRVVDQYSTTDEAKQAM 731

Query: 180 FYVTVGR------------------NQLAAKE-----VEIGRYYLKRGEYVAAIPRFQLV 216
             +                        L+  E              RG Y  A+      
Sbjct: 732 RSIENIYLDKGDATGYIRYATGTNIGDLSTSEQDSRAFSTATTLFSRGNYQGAVEAVNAY 791

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEA 246
              +      + A     E+  AL    EA
Sbjct: 792 FDKFPKPIQEKYARFIRAESNAALGKNQEA 821



 Score = 55.5 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 28/210 (13%), Positives = 66/210 (31%), Gaps = 42/210 (20%)

Query: 68  LKEQNFSKAYEYFN-----------QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
            + +N++ +  YF            + +           ++   A   +S   Y +A + 
Sbjct: 552 FRNENYNTSANYFERFLSMGGKEGIELNTR-------NDAIARLADSYFSLKNYGRAMTE 604

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            ++ I    ++++ DY  +  G+                   +  +  +V++Y  S Y  
Sbjct: 605 YDKLI--NSKAQSQDYALFQRGIIQGLQGNSSGK--------IATLQSVVQKYPKSNYAD 654

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
              F +                 Y   G+Y  AI   Q ++  Y  + +   A+  +   
Sbjct: 655 DVAFEIPYT--------------YFTLGQYDQAISGLQSMVEKYPRSSYVPRALVTIGLV 700

Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYV 266
                  D A +    + ++Y     A+  
Sbjct: 701 QYNQDNNDAALKTFQRVVDQYSTTDEAKQA 730



 Score = 35.5 bits (81), Expect = 7.2,   Method: Composition-based stats.
 Identities = 8/65 (12%), Positives = 22/65 (33%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D       +   ++    +  ++++ KA E+F +            +     A+ ++   
Sbjct: 132 DYPASPNSKAAYFQIGRSYYAKKDYKKAIEWFTKIDGKNLAGAENTEYRFKLAYSRFMTE 191

Query: 109 KYQQA 113
            Y  A
Sbjct: 192 DYTSA 196


>gi|207728191|ref|YP_002256585.1| hypothetical protein RSMK04568 [Ralstonia solanacearum MolK2]
 gi|300704848|ref|YP_003746451.1| associated to tol-pal complex protein (ygcf) [Ralstonia
           solanacearum CFBP2957]
 gi|206591436|emb|CAQ57048.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
 gi|299072512|emb|CBJ43862.1| putative associated to Tol-Pal complex protein (ygcF) [Ralstonia
           solanacearum CFBP2957]
          Length = 257

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 17/129 (13%), Positives = 41/129 (31%), Gaps = 8/129 (6%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
             +++ Y+ A+   +  +F  A   F+   + +P +     +        Y+   Y+ + 
Sbjct: 134 PGEKDEYDAALKTFQGGDFKGAGNQFSAFVKKYPQSPYLPLAQFWLGNALYAQRDYKGST 193

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
            + E      P+          V              Q+A     + +  +V +Y  +  
Sbjct: 194 YVLENMARANPQHPKAPEALLQVA------TNQGESGQKAA--ARKTLEAVVAQYPGTEQ 245

Query: 175 VKGARFYVT 183
            K A   + 
Sbjct: 246 AKTASSRLK 254



 Score = 42.8 bits (100), Expect = 0.058,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 14/119 (11%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K      S  V++Y  SPY+  A+       N L          Y +R  Y  +   
Sbjct: 150 GDFKGAGNQFSAFVKKYPQSPYLPLAQ---FWLGNAL----------YAQRD-YKGSTYV 195

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
            + +         A EA+ ++            AR+ +  +  +YP    A+   + +K
Sbjct: 196 LENMARANPQHPKAPEALLQVATNQGESGQKAAARKTLEAVVAQYPGTEQAKTASSRLK 254


>gi|222056474|ref|YP_002538836.1| Lytic transglycosylase catalytic [Geobacter sp. FRC-32]
 gi|221565763|gb|ACM21735.1| Lytic transglycosylase catalytic [Geobacter sp. FRC-32]
          Length = 717

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 74/240 (30%), Gaps = 43/240 (17%)

Query: 14  AWAYQLYKFALTIFFSIAVCFLV-----------GWERQSSRDVYLDSVTDVRYQRE--- 59
                L   AL I FSI+                  +    +D      + ++  +    
Sbjct: 1   MLFRSLTALALIILFSISASGTTLFPLPDEALQEASKHFRDKDYGPARESALKAPQSGIR 60

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKYQQAASLGE 118
            +   +  +K + + +A  Y    + +FP     A   L   A       K+ +A +   
Sbjct: 61  DFILGMAAIKLEQWQEAISYLGYAAHNFPLLGDYA---LYNQATAFSRQDKHPEALASLG 117

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           + +  YPES       YL G         +          L+  +  +ERY        A
Sbjct: 118 KMLKVYPESPINRAAIYLKGNELYASGNFID--------ALKTYTDFIERYPQGADSLTA 169

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA---MARLVE 235
            +   + R QL              G+  AA    + +  NY  +    +A   + RL +
Sbjct: 170 LYRSALCREQL--------------GDPAAAASILRSIPINYPASSLTPKASLDLERLAQ 215



 Score = 52.4 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 56/167 (33%), Gaps = 15/167 (8%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y +A  F ++    +A     +  + +P + + R ++ +     Y++G +  A     +
Sbjct: 96  LYNQATAFSRQDKHPEALASLGKMLKVYPESPINRAAIYLKGNELYASGNFIDALKTYTD 155

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           +I +YP+  +     Y   +   Q+                 +  I   Y  S     A 
Sbjct: 156 FIERYPQGADSLTALYRSALCREQL--------GDPAAAASILRSIPINYPASSLTPKAS 207

Query: 180 FYVTVG------RNQLAAKEVE-IGRYYLKRGEYVAAIPRFQLVLAN 219
             +            L+  E+   G      G+Y  AI  F  VL  
Sbjct: 208 LDLERLAQTGIKIEPLSTNEIFRQGTILFDLGKYAQAIKTFDSVLQK 254



 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 77/237 (32%), Gaps = 30/237 (12%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREV-----YEKAVLFLKEQNFSKAYEYFNQCSRD 86
              L    + +      DSV       E+     ++KA    K +++  A + F    + 
Sbjct: 232 GTILFDLGKYAQAIKTFDSVLQKSSNPEINVRFQFKKAQALFKSRHYKDAEQLFTALGKV 291

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
                +  +     A      GK  +A S        +P++   D       +  A  IR
Sbjct: 292 NSGKVLNGEIRFWLARTLAKNGKEDEAVSAYLLLADTWPKAALADDA-----LLEAAQIR 346

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
                Q+ T    Q + R +  Y  S   K   + +   R               +  +Y
Sbjct: 347 KS---QKKTDEAQQLLQRSLFLYPESGLKKSLLWEIAWER--------------YQAKDY 389

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
            AA   F   LA Y +    + A+    ++  A    + A+   S +   +P GY+A
Sbjct: 390 KAASDWFGK-LAGYEN--ARDRALYWRGKSLAAAGDQEGAKASFSQLMTEFPLGYYA 443


>gi|95929134|ref|ZP_01311878.1| N-acetylmuramoyl-L-alanine amidase [Desulfuromonas acetoxidans DSM
           684]
 gi|95134632|gb|EAT16287.1| N-acetylmuramoyl-L-alanine amidase [Desulfuromonas acetoxidans DSM
           684]
          Length = 582

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 56/153 (36%), Gaps = 23/153 (15%)

Query: 84  SRDFPFAGV--ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
              + +  +  A +        QY    + +  +  + ++ Q+P+ +     YYL+G S+
Sbjct: 32  DARYAYQQLLRAPQKQ------QYRHH-WDKVFTQLQHFVDQHPDHEKAPGAYYLLGQSH 84

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            + + ++   ++  +  + Y   +  RY +S     A           A  + E+     
Sbjct: 85  -EKLYEISRVKKDARAAVDYYQSLARRYPSSSLADDALL-------FSARLQCEV----- 131

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
             G   AA    Q++L  Y   +  + A   L 
Sbjct: 132 -LGAEQAARNDCQVILQRYPSGDMHKRARELLA 163



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/136 (22%), Positives = 55/136 (40%), Gaps = 14/136 (10%)

Query: 140 SYAQMIRDVPYDQ--RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
           +Y Q++R     Q       +   +   V+++ +     GA + +     +L     EI 
Sbjct: 36  AYQQLLRAPQKQQYRHHWDKVFTQLQHFVDQHPDHEKAPGAYYLLGQSHEKL----YEIS 91

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM---ARLVEAYVALALMDEAREVVSLIQ 254
           R  +K+    AA+  +Q +   Y  +  A++A+   ARL      L     AR    +I 
Sbjct: 92  R--VKKDA-RAAVDYYQSLARRYPSSSLADDALLFSARLQ--CEVLGAEQAARNDCQVIL 146

Query: 255 ERYPQGYWARYVETLV 270
           +RYP G   +    L+
Sbjct: 147 QRYPSGDMHKRARELL 162


>gi|207744074|ref|YP_002260466.1| hypothetical protein RSIPO_02260 [Ralstonia solanacearum IPO1609]
 gi|206595478|emb|CAQ62405.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609]
          Length = 257

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 17/129 (13%), Positives = 41/129 (31%), Gaps = 8/129 (6%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
             +++ Y+ A+   +  +F  A   F+   + +P +     +        Y+   Y+ + 
Sbjct: 134 PGEKDEYDAALKTFQGGDFKGAGNQFSAFVKKYPQSPYLPLAQFWLGNALYAQRDYKGST 193

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
            + E      P+          V              Q+A     + +  +V +Y  +  
Sbjct: 194 YVLENMARANPQHPKAPEALLQVA------TNQGESGQKAA--ARKTLEAVVVQYPGTEQ 245

Query: 175 VKGARFYVT 183
            K A   + 
Sbjct: 246 AKTASSRLK 254



 Score = 42.0 bits (98), Expect = 0.099,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 14/119 (11%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K      S  V++Y  SPY+  A+       N L          Y +R  Y  +   
Sbjct: 150 GDFKGAGNQFSAFVKKYPQSPYLPLAQ---FWLGNAL----------YAQRD-YKGSTYV 195

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
            + +         A EA+ ++            AR+ +  +  +YP    A+   + +K
Sbjct: 196 LENMARANPQHPKAPEALLQVATNQGESGQKAAARKTLEAVVVQYPGTEQAKTASSRLK 254


>gi|292487663|ref|YP_003530536.1| Hypothetical protein ybgF [Erwinia amylovora CFBP1430]
 gi|292898900|ref|YP_003538269.1| exported protein [Erwinia amylovora ATCC 49946]
 gi|291198748|emb|CBJ45857.1| putative exported protein [Erwinia amylovora ATCC 49946]
 gi|291553083|emb|CBA20128.1| Hypothetical protein ybgF precursor [Erwinia amylovora CFBP1430]
          Length = 259

 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 44/137 (32%), Gaps = 9/137 (6%)

Query: 46  VYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
               + T        Y  AV   L+++ +  A   F    + +P +     +      + 
Sbjct: 127 AVASAPTQSGDANTDYNAAVALVLEKKQYDSAISAFQTFVKKYPDSTYQPNANYWLGQLN 186

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y+ GK   AA      +  YP+S       + VG+   +                    +
Sbjct: 187 YNKGKKDDAAYYFATVVKMYPKSPKSADALFKVGVIMQEKGDKA--------KAKAVYQQ 238

Query: 165 IVERYTNSPYVKGARFY 181
           +++ Y +S   K A+  
Sbjct: 239 VIKLYPDSEAAKTAQKR 255



 Score = 49.3 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 38/111 (34%), Gaps = 14/111 (12%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
            +      V++Y +S Y   A +++                    +G+   A   F  V+
Sbjct: 158 AISAFQTFVKKYPDSTYQPNANYWLGQLN--------------YNKGKKDDAAYYFATVV 203

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
             Y  +  + +A+ ++           +A+ V   + + YP    A+  + 
Sbjct: 204 KMYPKSPKSADALFKVGVIMQEKGDKAKAKAVYQQVIKLYPDSEAAKTAQK 254



 Score = 47.0 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 45/125 (36%), Gaps = 22/125 (17%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +Y  A S  + ++ +YP+S       Y +G       +              Y + +V+
Sbjct: 153 KQYDSAISAFQTFVKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYFATVVK 204

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y  SP    A F V V                 ++G+   A   +Q V+  Y D+E A+
Sbjct: 205 MYPKSPKSADALFKVGVIMQ--------------EKGDKAKAKAVYQQVIKLYPDSEAAK 250

Query: 228 EAMAR 232
            A  R
Sbjct: 251 TAQKR 255



 Score = 42.4 bits (99), Expect = 0.064,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 28/66 (42%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           L++ +Y +AI  FQ  +  Y D+ +   A   L +        D+A    + + + YP+ 
Sbjct: 150 LEKKQYDSAISAFQTFVKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFATVVKMYPKS 209

Query: 261 YWARYV 266
             +   
Sbjct: 210 PKSADA 215


>gi|212703030|ref|ZP_03311158.1| hypothetical protein DESPIG_01068 [Desulfovibrio piger ATCC 29098]
 gi|212673618|gb|EEB34101.1| hypothetical protein DESPIG_01068 [Desulfovibrio piger ATCC 29098]
          Length = 341

 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 19/146 (13%), Positives = 38/146 (26%), Gaps = 8/146 (5%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
                 SS     D+   V  ++  Y+  +  +      +            P    A  
Sbjct: 199 APGADSSSDGATADTSVPVTDEKAAYQAGLDLILSGRLDEGMARMQALLDQHPSGAYAAN 258

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +         S G+ ++A         +YP+           GM        +   Q   
Sbjct: 259 AEYWLGEALSSQGRNEEALKHFRNVEARYPKHHKNADALLRTGM--------ILRQQGDA 310

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFY 181
               +   ++V+R+  S      R  
Sbjct: 311 AGAGKAFRQVVQRFPASAAAAIIRKK 336


>gi|296272366|ref|YP_003654997.1| hypothetical protein Arnit_0826 [Arcobacter nitrofigilis DSM 7299]
 gi|296096540|gb|ADG92490.1| conserved hypothetical protein [Arcobacter nitrofigilis DSM 7299]
          Length = 222

 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 68/193 (35%), Gaps = 13/193 (6%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
              +L      A+       ++  ++    ++         Y K    +   +   A + 
Sbjct: 10  KSLSLVFIAGFAMTLTSCSSKKGPKEYGQPAIYW-------YNKIANDIATSDLEGADDA 62

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
           +     +   + +   +L +       A +Y+ A    +EY  ++  SK++DY  YL   
Sbjct: 63  YISLESEHKNSPLLATALQILVNAHIDAEEYELANFYIDEYTKRFGVSKSIDYFRYLKIK 122

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY---VKGARFYVTVGRNQLAAKEVEI 196
           +          +Q       + ++  + ++ NSPY   V      + + +   A+ + EI
Sbjct: 123 ANFLSFSSEFREQNLITQTQKEINEFMVKFPNSPYMPLVGTINARLAMAK---ASFDKEI 179

Query: 197 GRYYLKRGEYVAA 209
              Y +  +  AA
Sbjct: 180 ADLYKRVDKPKAA 192


>gi|283833961|ref|ZP_06353702.1| putative periplasmic protein [Citrobacter youngae ATCC 29220]
 gi|291070092|gb|EFE08201.1| putative periplasmic protein [Citrobacter youngae ATCC 29220]
          Length = 262

 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 47/134 (35%), Gaps = 9/134 (6%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           +          Y  A+  +++++    A E F    + +P +     +      + Y+ G
Sbjct: 134 APAQTGDANTDYNAAIALVQDKSRQDDAIEAFQNFIKKYPDSTYLPNANYWLGQLNYNKG 193

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           K   AA      +  YP+S       Y VG+        +  D+  T        +++ +
Sbjct: 194 KKDDAAFYFASVVKNYPKSPKAADAMYKVGV--------IMQDKGDTAKAKAVYQQVITK 245

Query: 169 YTNSPYVKGARFYV 182
           Y  +   K A+  +
Sbjct: 246 YPGTDGAKQAQKRL 259



 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 46/131 (35%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      ++     +++Y +S Y+  A +++               
Sbjct: 141 ANTDYNAAIALVQDKSRQDDAIEAFQNFIKKYPDSTYLPNANYWLGQLN----------- 189

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
             Y K  +  AA   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 190 --YNKGKKDDAAFY-FASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVITKY 246

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 247 PGTDGAKQAQK 257



 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 42/123 (34%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I +YP+S  +    Y +G       +              Y + +V+ Y 
Sbjct: 159 DDAIEAFQNFIKKYPDSTYLPNANYWLGQLNYNKGKKDD--------AAFYFASVVKNYP 210

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A + V V                  +G+   A   +Q V+  Y   + A++A 
Sbjct: 211 KSPKAADAMYKVGVIMQ--------------DKGDTAKAKAVYQQVITKYPGTDGAKQAQ 256

Query: 231 ARL 233
            RL
Sbjct: 257 KRL 259


>gi|254880860|ref|ZP_05253570.1| TPR domain-containing protein [Bacteroides sp. 4_3_47FAA]
 gi|254833653|gb|EET13962.1| TPR domain-containing protein [Bacteroides sp. 4_3_47FAA]
          Length = 967

 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 72/222 (32%), Gaps = 46/222 (20%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D          +YE+   F++ ++ + A   FN   + FP + VAR++      + Y   
Sbjct: 574 DYPESQYMDDALYEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAANEIGLLYYQDD 633

Query: 109 KYQQAASLGEEYITQYPESKNV------------------DYVYYLVGMSYAQMIRDVPY 150
           KY +A    ++ I  YP S+                    +Y  +   +           
Sbjct: 634 KYPEAIQAYKQVIAGYPGSEEARLAQRDLKSIYIDLNKVDEYANFASTIPGGANFDVNER 693

Query: 151 D------------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           D            +          +R ++ +    +   A +Y+ +              
Sbjct: 694 DSLTYVAAERVYMRGEVAEARNSFTRYLQTFPEGAFSLNANYYIGLID------------ 741

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE-AYVA 239
               +  Y +A      VL  Y + +++E+AM    E AY A
Sbjct: 742 --YNQKAYESAARHLDKVLE-YPNNKYSEDAMLMGAEMAYTA 780



 Score = 61.3 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 73/214 (34%), Gaps = 26/214 (12%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLG 117
           +Y     + K++N+  A  +F +            ++          +   +++QA    
Sbjct: 474 LYNLGYTYFKQKNYGNAGTWFTRFVDRGSINERTMQADAYNRIGDCNFYDRRFEQARQDY 533

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
              +   P     DY  Y         +R +  D       +Q ++R++  Y  S Y+  
Sbjct: 534 ARAVEIDPS--LGDYSLYQEA-----FVRGLQRD---YNGKVQTLNRLISDYPESQYMDD 583

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           A                E GR +++  +   AI RF +++  + ++  A  A   +   Y
Sbjct: 584 AL--------------YEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAANEIGLLY 629

Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
                  EA +    +   YP    AR  +  +K
Sbjct: 630 YQDDKYPEAIQAYKQVIAGYPGSEEARLAQRDLK 663



 Score = 40.1 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 75/248 (30%), Gaps = 52/248 (20%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +  L +   +  C L G  +Q +           R  RE   K    +         E
Sbjct: 1   MKRKTLLMAALMGGCSLQGMAQQITPKDVAGDKEYNRVCREYELKGGDSM---------E 51

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +P +    + L + A   +  GKY++A +L                      
Sbjct: 52  LLQAYLDKYPDSRHKNRVLSLIASAYFMEGKYKEAIALFRS------------------- 92

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL------AAK 192
               + + D   D  A +L   Y+            ++ A  + T+ +         A  
Sbjct: 93  -CDLEALPDKERDDCAMRLATSYLKE--------DNLREAAVWFTLLKEVSPLYQDDAVY 143

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM--ARLVEAYVALALMDEAREVV 250
            +    Y  KR  Y  A+  FQ +  +         A+    + E Y+      +AR V 
Sbjct: 144 NLAYIDYVEKR--YDKALKSFQSLQND-----AVYAALVPYYIGEIYLVKGNYQQARTVA 196

Query: 251 SLIQERYP 258
               E+YP
Sbjct: 197 KAYLEQYP 204



 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 29/59 (49%), Gaps = 1/59 (1%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y   ++   ++ +  A  + ++    +P    +  ++LM A + Y+A  Y++A  + ++
Sbjct: 735 YYIGLIDYNQKAYESAARHLDKVLE-YPNNKYSEDAMLMGAEMAYTAKDYEKALHIYKQ 792



 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 76/233 (32%), Gaps = 31/233 (13%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A         ++A   F +  + FP    +  +      + Y+   Y+ AA   ++ 
Sbjct: 698 YVAAERVYMRGEVAEARNSFTRYLQTFPEGAFSLNANYYIGLIDYNQKAYESAARHLDKV 757

Query: 121 ITQYPESKNVDYVY------------YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +  YP +K  +               Y   +   + ++D        +L    M R    
Sbjct: 758 LE-YPNNKYSEDAMLMGAEMAYTAKDYEKALHIYKQLKDKAASMERRRLAKTGMLRSAHM 816

Query: 169 YTNSPYVKGARFYVTVGRNQLAAK----EVEIGRYYLKRGEYVAAIPRFQLVLANY---- 220
             N   +      +    + LA      E+    +Y +   Y+ A       + +     
Sbjct: 817 LGNEEEI------IFAATDLLADTKLAPELSNEAHYYRAKAYLDAGK-TDGAMEDLKVLA 869

Query: 221 SDAEHAE--EAMARLVEAYVALALMDEA-REVVSLIQERYPQGYWARYVETLV 270
            D  +    EA  ++ + Y      D+A +EV++ I+   P  YW      L+
Sbjct: 870 KDTRNVYGAEAKYKVAQIYFDGGQTDKAEQEVLNYIEVSTPHTYWLARSFVLL 922



 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 20/153 (13%), Positives = 45/153 (29%), Gaps = 24/153 (15%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +YE  + +     +SKA     + +       +++ + L       +  +  +A    E+
Sbjct: 248 LYELGMSYYYTGVYSKAAATLGEMASVH--DALSQNAYLHMGLAYLNLKERNRARMAFEQ 305

Query: 120 YITQYPESKNV-DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
               +     V +   Y   +   +               +    R +  + NSPY +  
Sbjct: 306 -AANFSFDPKVKEQALYNYALCIHETSYS------PFAESVTVFERFLNEFPNSPYTERV 358

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
             Y+                 Y+    Y AA+ 
Sbjct: 359 NDYLIEV--------------YMNTRSYEAALK 377


>gi|150003900|ref|YP_001298644.1| hypothetical protein BVU_1333 [Bacteroides vulgatus ATCC 8482]
 gi|149932324|gb|ABR39022.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
          Length = 967

 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 72/222 (32%), Gaps = 46/222 (20%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D          +YE+   F++ ++ + A   FN   + FP + VAR++      + Y   
Sbjct: 574 DYPESQYMDDALYEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAANEIGLLYYQDD 633

Query: 109 KYQQAASLGEEYITQYPESKNV------------------DYVYYLVGMSYAQMIRDVPY 150
           KY +A    ++ I  YP S+                    +Y  +   +           
Sbjct: 634 KYPEAIQAYKQVIAGYPGSEEARLAQRDLKSIYIDLNKVDEYANFASTIPGGANFDVNER 693

Query: 151 D------------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           D            +          +R ++ +    +   A +Y+ +              
Sbjct: 694 DSLTYVAAERVYMRGEVAEARNSFTRYLQTFPEGAFSLNANYYIGLID------------ 741

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE-AYVA 239
               +  Y +A      VL  Y + +++E+AM    E AY A
Sbjct: 742 --YNQKAYESAARHLDKVLE-YPNNKYSEDAMLMGAEMAYTA 780



 Score = 61.3 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 73/214 (34%), Gaps = 26/214 (12%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLG 117
           +Y     + K++N+  A  +F +            ++          +   +++QA    
Sbjct: 474 LYNLGYTYFKQKNYGNAGTWFTRFVDRGSINERTMQADAYNRIGDCNFYDRRFEQARQDY 533

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
              +   P     DY  Y         +R +  D       +Q ++R++  Y  S Y+  
Sbjct: 534 ARAVEIDPS--LGDYSLYQEA-----FVRGLQRD---YNGKVQTLNRLISDYPESQYMDD 583

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           A                E GR +++  +   AI RF +++  + ++  A  A   +   Y
Sbjct: 584 AL--------------YEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAANEIGLLY 629

Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
                  EA +    +   YP    AR  +  +K
Sbjct: 630 YQDDKYPEAIQAYKQVIAGYPGSEEARLAQRDLK 663



 Score = 40.1 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 75/248 (30%), Gaps = 52/248 (20%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +  L +   +  C L G  +Q +           R  RE   K    +         E
Sbjct: 1   MKRKTLLMAALMGGCSLQGMAQQITPKDVAGDKEYNRVCREYELKGGDSM---------E 51

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                   +P +    + L + A   +  GKY++A +L                      
Sbjct: 52  LLQAYLDKYPDSRHKNRVLSLIASAYFMEGKYKEAIALFRS------------------- 92

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL------AAK 192
               + + D   D  A +L   Y+            ++ A  + T+ +         A  
Sbjct: 93  -CDLEALPDKERDDCAMRLATSYLKE--------DNLREAAVWFTLLKEVSPLYQDDAVY 143

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM--ARLVEAYVALALMDEAREVV 250
            +    Y  KR  Y  A+  FQ +  +         A+    + E Y+      +AR V 
Sbjct: 144 NLAYIDYVEKR--YDKALKSFQSLQND-----AVYAALVPYYIGEIYLVKGNYQQARTVA 196

Query: 251 SLIQERYP 258
               E+YP
Sbjct: 197 KAYLEQYP 204



 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 29/59 (49%), Gaps = 1/59 (1%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y   ++   ++ +  A  + ++    +P    +  ++LM A + Y+A  Y++A  + ++
Sbjct: 735 YYIGLIDYNQKAYESAARHLDKVLE-YPNNKYSEDAMLMGAEMAYTAKDYEKALHIYKQ 792



 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 76/233 (32%), Gaps = 31/233 (13%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A         ++A   F +  + FP    +  +      + Y+   Y+ AA   ++ 
Sbjct: 698 YVAAERVYMRGEVAEARNSFTRYLQTFPEGAFSLNANYYIGLIDYNQKAYESAARHLDKV 757

Query: 121 ITQYPESKNVDYVY------------YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +  YP +K  +               Y   +   + ++D        +L    M R    
Sbjct: 758 LE-YPNNKYSEDAMLMGAEMAYTAKDYEKALHIYKQLKDKAASMERRRLAKTGMLRSAHM 816

Query: 169 YTNSPYVKGARFYVTVGRNQLAAK----EVEIGRYYLKRGEYVAAIPRFQLVLANY---- 220
             N   +      +    + LA      E+    +Y +   Y+ A       + +     
Sbjct: 817 LGNEEEI------IFAATDLLADTKLAPELSNEAHYYRAKAYLDAGK-TDGAMEDLKVLA 869

Query: 221 SDAEHAE--EAMARLVEAYVALALMDEA-REVVSLIQERYPQGYWARYVETLV 270
            D  +    EA  ++ + Y      D+A +EV++ I+   P  YW      L+
Sbjct: 870 KDTRNVYGAEAKYKVAQIYFDGGQTDKAEQEVLNYIEVSTPHTYWLARSFVLL 922



 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 20/153 (13%), Positives = 45/153 (29%), Gaps = 24/153 (15%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +YE  + +     +SKA     + +       +++ + L       +  +  +A    E+
Sbjct: 248 LYELGMSYYYTGVYSKAAATLGEMASVH--DALSQNAYLHMGLAYLNLKERNRARMAFEQ 305

Query: 120 YITQYPESKNV-DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
               +     V +   Y   +   +               +    R +  + NSPY +  
Sbjct: 306 -AANFSFDPKVKEQALYNYALCIHETSYS------PFAESVTVFERFLNEFPNSPYTERV 358

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
             Y+                 Y+    Y AA+ 
Sbjct: 359 NDYLIEV--------------YMNTRSYEAALK 377


>gi|190575560|ref|YP_001973405.1| putative TPR repeat exported protein [Stenotrophomonas maltophilia
           K279a]
 gi|190013482|emb|CAQ47117.1| putative TPR repeat exported protein [Stenotrophomonas maltophilia
           K279a]
          Length = 272

 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 8/137 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S+     +R  Y  A   LK   +  + + F    + +P    A  +L       Y+   
Sbjct: 138 SLAATGDERTSYNVAFDSLKAGKYDDSAQLFLSFLQLYPNGVYAPNALYWLGESYYATRN 197

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           +  A +   E + +YP           VG+S           +       Q +  +V +Y
Sbjct: 198 FPMAETQFRELLARYPTHDKAAGGLLKVGLSQY--------GEGKVDQAQQTLESVVAQY 249

Query: 170 TNSPYVKGARFYVTVGR 186
             S   + A+  +   R
Sbjct: 250 PGSDAARTAQDRLQSIR 266



 Score = 44.3 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 43/115 (37%), Gaps = 14/115 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              Q     ++ Y N  Y   A +++              G  Y     +  A  +F+ +
Sbjct: 163 DSAQLFLSFLQLYPNGVYAPNALYWL--------------GESYYATRNFPMAETQFREL 208

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           LA Y   + A   + ++  +      +D+A++ +  +  +YP    AR  +  ++
Sbjct: 209 LARYPTHDKAAGGLLKVGLSQYGEGKVDQAQQTLESVVAQYPGSDAARTAQDRLQ 263



 Score = 42.0 bits (98), Expect = 0.080,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 41/128 (32%), Gaps = 22/128 (17%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
            AGKY  +A L   ++  YP         Y +G SY                       +
Sbjct: 157 KAGKYDDSAQLFLSFLQLYPNGVYAPNALYWLGESYYATRNFPM--------AETQFREL 208

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           + RY                 ++ A   +++G      G+   A    + V+A Y  ++ 
Sbjct: 209 LARYPT--------------HDKAAGGLLKVGLSQYGEGKVDQAQQTLESVVAQYPGSDA 254

Query: 226 AEEAMARL 233
           A  A  RL
Sbjct: 255 ARTAQDRL 262



 Score = 35.1 bits (80), Expect = 9.4,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 24/58 (41%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           LK G+Y  +   F   L  Y +  +A  A+  L E+Y A      A      +  RYP
Sbjct: 156 LKAGKYDDSAQLFLSFLQLYPNGVYAPNALYWLGESYYATRNFPMAETQFRELLARYP 213


>gi|255689982|ref|ZP_05413657.1| TPR-domain containing protein [Bacteroides finegoldii DSM 17565]
 gi|260624589|gb|EEX47460.1| TPR-domain containing protein [Bacteroides finegoldii DSM 17565]
          Length = 1005

 Score = 62.1 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 43/206 (20%), Positives = 77/206 (37%), Gaps = 31/206 (15%)

Query: 44  RDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSR-DFPFAGVA--RKSLLM 99
           + + L+   +     + Y +    +L  +NF +A  Y++Q  + + P    +  + +L+ 
Sbjct: 534 KYIRLEKGENTTALADAYNRVGDCYLHVRNFEEAKHYYSQAEQMNTPSGDYSFYQLALVS 593

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
                     Y    +L    + +YP S       Y  G SY  M  +           +
Sbjct: 594 G-----LQKDYSGKITLLNRLVGKYPASPYAVNAIYEKGRSYVLMDNN--------NQAI 640

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
                ++ +Y  SP  + A                EIG  Y ++ +Y  AI  ++ V+  
Sbjct: 641 TSFKELMNKYPESPVSRKAAA--------------EIGLLYYQKDDYNQAIEAYKQVIEK 686

Query: 220 YSDAEHAEEAMARLVEAYVALALMDE 245
           Y  +E A  AM  L   YV L  +DE
Sbjct: 687 YPGSEEARMAMRDLKSIYVDLNRIDE 712



 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 33/236 (13%), Positives = 76/236 (32%), Gaps = 45/236 (19%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                    +YEK   ++   N ++A   F +    +P + V+RK+      + Y    Y
Sbjct: 614 PASPYAVNAIYEKGRSYVLMDNNNQAITSFKELMNKYPESPVSRKAAAEIGLLYYQKDDY 673

Query: 111 QQAASLGEEYITQYPESKNVDYVY------YL--------VGMSYAQ----MIRDVPYD- 151
            QA    ++ I +YP S+            Y+          ++ A            D 
Sbjct: 674 NQAIEAYKQVIEKYPGSEEARMAMRDLKSIYVDLNRIDEFAALANAMPGHIRFDANEQDS 733

Query: 152 -----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
                      +   +      ++ ++ +    +   A +++ +  ++    ++ +    
Sbjct: 734 LTYTAAEKIYMRGRLEEAKTSFNKYLQTFPEGAFSLNAHYHLCLIGSEQKNYDMIL---- 789

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           L  G+           L  Y +   AEEA+    E         +A     +++E+
Sbjct: 790 LHSGK-----------LLEYPNNPFAEEALILRAEVQFNQQQTADALTSYKMLKEK 834



 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 75/225 (33%), Gaps = 28/225 (12%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYS 106
              +  Y    Y    +    +++S+A  YF +     +      +A  +          
Sbjct: 502 QPNNETYALANYNLGYIAFHRKDYSQASHYFQKYIRLEKGENTTALA-DAYNRVGDCYLH 560

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
              +++A     +       + + DY +Y + +                   +  ++R+V
Sbjct: 561 VRNFEEAKHYYSQAEQMN--TPSGDYSFYQLALVSGLQKDYSGK--------ITLLNRLV 610

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
            +Y  SPY   A                E GR Y+       AI  F+ ++  Y ++  +
Sbjct: 611 GKYPASPYAVNAI--------------YEKGRSYVLMDNNNQAITSFKELMNKYPESPVS 656

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
            +A A +   Y      ++A E    + E+YP    AR     +K
Sbjct: 657 RKAAAEIGLLYYQKDDYNQAIEAYKQVIEKYPGSEEARMAMRDLK 701



 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/264 (13%), Positives = 73/264 (27%), Gaps = 55/264 (20%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
           +C  +            D  T       +Y++     +E+N++ A        +  P   
Sbjct: 9   ICAAICCTPIIGFAQTSDKFTST---DNLYKEGKELFQEKNYAAALPALKAFVKQKPATS 65

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-------- 143
           + + +  M A   Y      +   +  +Y+ +YP++   + +Y L+   Y          
Sbjct: 66  LLQDAEYMLASSAYELKDKNR-IEILRKYLDRYPDTPYANRIYALLASCYFYEGKYDEAL 124

Query: 144 ---------MIRDVPYDQ------------RATKLMLQYMSRIVERYTNSPYVKGARFYV 182
                    ++ +   D                +    +   +        Y K   +Y+
Sbjct: 125 ALFNSADLGLLGNEERDDCTYQLATCYLKTNNLREAAIWFETLRANSP--KYAKDCDYYL 182

Query: 183 TVGRNQLAAKE--------------------VEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
           +  R                             I   Y +   Y  A    Q  L+ Y +
Sbjct: 183 SYIRYTQKRYNEALKGFLPLQDDSKYKALVPYYIAEIYAQLQNYDKAQIVAQNYLSAYPN 242

Query: 223 AEHAEEAMARLVEAYVALALMDEA 246
            EH  E    L +AY       +A
Sbjct: 243 NEHTAEMYRILGDAYYHFGQYHQA 266



 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/169 (13%), Positives = 50/169 (29%), Gaps = 22/169 (13%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
           S + YLD       +  +Y   + + + + +SKA E   + +       + + + L    
Sbjct: 269 SFNEYLDKDHSAARRDALYMLGLSYYQTKVYSKAAETLGKVTTTN--DALTQNAYLHMGL 326

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
                 +  +A    E+        +  +   Y   +   +          A    +   
Sbjct: 327 SYLQLAEKNKARMAFEQAAASNANMQIKEQAAYNYALCLHETSFS------AFGESVTAF 380

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
            + +  +  SPY +    Y+                 Y+    Y AA+ 
Sbjct: 381 EKFLNEFPTSPYAEKVSSYLVEV--------------YMNTRSYDAALK 415


>gi|288817423|ref|YP_003431770.1| hypothetical protein HTH_0102 [Hydrogenobacter thermophilus TK-6]
 gi|288786822|dbj|BAI68569.1| hypothetical protein HTH_0102 [Hydrogenobacter thermophilus TK-6]
 gi|308751030|gb|ADO44513.1| TPR repeat-containing protein [Hydrogenobacter thermophilus TK-6]
          Length = 846

 Score = 62.1 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 57/132 (43%), Gaps = 13/132 (9%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           +   E+Y   + +  E ++  + +YF   S +   + +  K+LL      Y+ GK + A 
Sbjct: 487 KTDEELYLLGLSYFLEGDYESSAKYFKSISSN---SPLKPKALLKLGDALYNEGKVESAK 543

Query: 115 SLGEEYITQYPESKNVDYV-YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
           +   E I++YP S+   Y    L+GM   + I DV         M Q +   + +Y NS 
Sbjct: 544 AYYYEIISKYPNSEQAKYATLSLIGMG-GKNIGDV--------QMQQLLEDYLRKYPNSA 594

Query: 174 YVKGARFYVTVG 185
             +  ++ +   
Sbjct: 595 VSEDLKYQLAQI 606



 Score = 40.1 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 67/198 (33%), Gaps = 46/198 (23%)

Query: 80  FNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
             +    +P  +            +  +  G ++ A    E+     P         Y  
Sbjct: 400 LEEIRNRYPALYREYT-------GWFYFKKGDWENAVRYLED-----P---------YYK 438

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK----- 192
            ++Y  M           K     ++ +  R +    V  A+  + +G  +LA       
Sbjct: 439 ALAYFNM-----------KDYKGVLNILESRNSERDRVLKAKSALFLGDPKLARSFLTDK 487

Query: 193 ---EVEI-GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
              E+ + G  Y   G+Y ++   F+ + +N   +    +A+ +L +A      ++ A+ 
Sbjct: 488 TDEELYLLGLSYFLEGDYESSAKYFKSISSN---SPLKPKALLKLGDALYNEGKVESAKA 544

Query: 249 VVSLIQERYPQGYWARYV 266
               I  +YP    A+Y 
Sbjct: 545 YYYEIISKYPNSEQAKYA 562


>gi|300777177|ref|ZP_07087035.1| TPR repeat-containing protein [Chryseobacterium gleum ATCC 35910]
 gi|300502687|gb|EFK33827.1| TPR repeat-containing protein [Chryseobacterium gleum ATCC 35910]
          Length = 987

 Score = 62.1 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 73/206 (35%), Gaps = 29/206 (14%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+    + K + F +A  YF Q   + P       + L  A + Y+     +A ++ ++ 
Sbjct: 508 YDLGYAYFKSKKFDQAATYFKQYLAN-PKPEFKNDAELRLADIHYANNDLNEAIAIYDK- 565

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
                     DY  Y   M+              T+  +  +  ++ +Y +S Y   A+ 
Sbjct: 566 -----NEDATDYTLYQKAMALGFK--------GDTQAKINNLKNLLSKYPDSEYYDDAQ- 611

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
                         EIG  Y  + ++  +   F  V+   SD +    A     + Y+  
Sbjct: 612 -------------YEIGTAYAAQDDFANSNDYFGKVIKGSSDKDLIANASIYRAQNYIDQ 658

Query: 241 ALMDEAREVVSLIQERYPQGYWARYV 266
              D+A   +  + E+Y    +A+ V
Sbjct: 659 NQNDKALSELKSLGEQYKNTAYAQKV 684



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 69/209 (33%), Gaps = 34/209 (16%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y        + N+ +A +YF +            ++L   A V Y  G Y  A    E+ 
Sbjct: 436 YLLGTEEFNKGNYDEAEKYFLRSLGFNINKEFNSRALYWLAQVYYQKGNYPSAIVRYEKL 495

Query: 121 IT-QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           +   +PE + + Y     G +Y +         +       Y  + +       +   A 
Sbjct: 496 LNENFPEKQQLPYDL---GYAYFKS--------KKFDQAATYFKQYLAN-PKPEFKNDAE 543

Query: 180 FYVTVGRNQLAAKEVE--IGRY-----------YLK------RGEYVAAIPRFQLVLANY 220
             +       A  ++   I  Y           Y K      +G+  A I   + +L+ Y
Sbjct: 544 LRLADI--HYANNDLNEAIAIYDKNEDATDYTLYQKAMALGFKGDTQAKINNLKNLLSKY 601

Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREV 249
            D+E+ ++A   +  AY A      + + 
Sbjct: 602 PDSEYYDDAQYEIGTAYAAQDDFANSNDY 630



 Score = 42.4 bits (99), Expect = 0.063,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 63/216 (29%), Gaps = 30/216 (13%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           +      +Y+KA+    + +              +P +     +         +   +  
Sbjct: 567 EDATDYTLYQKAMALGFKGDTQAKINNLKNLLSKYPDSEYYDDAQYEIGTAYAAQDDFAN 626

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           +     + I     S + D    L+  +     ++   DQ      L  +  + E+Y N+
Sbjct: 627 SNDYFGKVIK---GSSDKD----LIANASIYRAQNYI-DQNQNDKALSELKSLGEQYKNT 678

Query: 173 PYVKG---ARFYVTVGRNQLAAKE-------------------VEIGRYYLKRGEYVAAI 210
            Y +    A   +      ++  E                   +  G+    + +Y  AI
Sbjct: 679 AYAQKVVQAAKPIFTKNGDVSGYETFARNIGVNVDAAEIDEINLSTGKQLFAKKDYKNAI 738

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
             ++  L      E   +A   L E+Y       +A
Sbjct: 739 SYYEKYLTQNPTGEGLYQAKYELGESYYQTNNSTKA 774



 Score = 36.2 bits (83), Expect = 4.3,   Method: Composition-based stats.
 Identities = 6/58 (10%), Positives = 17/58 (29%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
                   ++++  A  Y+ +     P      ++        Y      +A  + +E
Sbjct: 723 STGKQLFAKKDYKNAISYYEKYLTQNPTGEGLYQAKYELGESYYQTNNSTKALLVLQE 780


>gi|319639870|ref|ZP_07994599.1| hypothetical protein HMPREF9011_00196 [Bacteroides sp. 3_1_40A]
 gi|317388534|gb|EFV69384.1| hypothetical protein HMPREF9011_00196 [Bacteroides sp. 3_1_40A]
          Length = 960

 Score = 62.1 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 72/222 (32%), Gaps = 46/222 (20%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D          +YE+   F++ ++ + A   FN   + FP + VAR++      + Y   
Sbjct: 567 DYPESQYMDDALYEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAANEIGLLYYQDD 626

Query: 109 KYQQAASLGEEYITQYPESKNV------------------DYVYYLVGMSYAQMIRDVPY 150
           KY +A    ++ I  YP S+                    +Y  +   +           
Sbjct: 627 KYPEAIQAYKQVIAGYPGSEEARLAQRDLKSIYIDLNKVDEYANFASTIPGGANFDVNER 686

Query: 151 D------------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           D            +          +R ++ +    +   A +Y+ +              
Sbjct: 687 DSLTYVAAERVYMRGEVAEARNSFTRYLQTFPEGAFSLNANYYIGLID------------ 734

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE-AYVA 239
               +  Y +A      VL  Y + +++E+AM    E AY A
Sbjct: 735 --YNQKAYESAARHLDKVLE-YPNNKYSEDAMLMGAEMAYTA 773



 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 73/214 (34%), Gaps = 26/214 (12%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLG 117
           +Y     + K++N+  A  +F +            ++          +   +++QA    
Sbjct: 467 LYNLGYTYFKQKNYGNAGTWFTRFVDRGSINERTMQADAYNRIGDCNFYDRRFEQARQDY 526

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
              +   P     DY  Y         +R +  D       +Q ++R++  Y  S Y+  
Sbjct: 527 ARAVEIDPS--LGDYSLYQEA-----FVRGLQRD---YNGKVQTLNRLISDYPESQYMDD 576

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           A                E GR +++  +   AI RF +++  + ++  A  A   +   Y
Sbjct: 577 AL--------------YEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAANEIGLLY 622

Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
                  EA +    +   YP    AR  +  +K
Sbjct: 623 YQDDKYPEAIQAYKQVIAGYPGSEEARLAQRDLK 656



 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 29/59 (49%), Gaps = 1/59 (1%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y   ++   ++ +  A  + ++    +P    +  ++LM A + Y+A  Y++A  + ++
Sbjct: 728 YYIGLIDYNQKAYESAARHLDKVLE-YPNNKYSEDAMLMGAEMAYTAKDYEKALHIYKQ 785



 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 76/233 (32%), Gaps = 31/233 (13%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A         ++A   F +  + FP    +  +      + Y+   Y+ AA   ++ 
Sbjct: 691 YVAAERVYMRGEVAEARNSFTRYLQTFPEGAFSLNANYYIGLIDYNQKAYESAARHLDKV 750

Query: 121 ITQYPESKNVDYVY------------YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +  YP +K  +               Y   +   + ++D        +L    M R    
Sbjct: 751 LE-YPNNKYSEDAMLMGAEMAYTAKDYEKALHIYKQLKDKAASMERRRLAKTGMLRSAHM 809

Query: 169 YTNSPYVKGARFYVTVGRNQLAAK----EVEIGRYYLKRGEYVAAIPRFQLVLANY---- 220
             N   +      +    + LA      E+    +Y +   Y+ A       + +     
Sbjct: 810 LGNEEEI------IFAATDLLADTKLAPELSNEAHYYRAKAYLDAGK-TDGAMEDLKVLA 862

Query: 221 SDAEHAE--EAMARLVEAYVALALMDEA-REVVSLIQERYPQGYWARYVETLV 270
            D  +    EA  ++ + Y      D+A +EV++ I+   P  YW      L+
Sbjct: 863 KDTRNVYGAEAKYKVAQIYFDGGQTDKAEQEVLNYIEVSTPHTYWLARSFVLL 915



 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 20/153 (13%), Positives = 45/153 (29%), Gaps = 24/153 (15%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +YE  + +     +SKA     + +       +++ + L       +  +  +A    E+
Sbjct: 241 LYELGMSYYYTGVYSKAAATLGEMASVH--DALSQNAYLHMGLAYLNLKERNRARMAFEQ 298

Query: 120 YITQYPESKNV-DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
               +     V +   Y   +   +               +    R +  + NSPY +  
Sbjct: 299 -AANFSFDPKVKEQALYNYALCIHETSYS------PFAESVTVFERFLNEFPNSPYTERV 351

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
             Y+                 Y+    Y AA+ 
Sbjct: 352 NDYLIEV--------------YMNTRSYEAALK 370



 Score = 35.9 bits (82), Expect = 6.7,   Method: Composition-based stats.
 Identities = 41/241 (17%), Positives = 72/241 (29%), Gaps = 52/241 (21%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           +   +  C L G  +Q +           R  RE   K    +         E       
Sbjct: 1   MAALMGGCSLQGMAQQITPKDVAGDKEYNRVCREYELKGGDSM---------ELLQAYLD 51

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
            +P +    + L + A   +  GKY++A +L                          + +
Sbjct: 52  KYPDSRHKNRVLSLIASAYFMEGKYKEAIALFRS--------------------CDLEAL 91

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL------AAKEVEIGRY 199
            D   D  A +L   Y+            ++ A  + T+ +         A   +    Y
Sbjct: 92  PDKERDDCAMRLATSYLKE--------DNLREAAVWFTLLKEVSPLYQDDAVYNLAYIDY 143

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAM--ARLVEAYVALALMDEAREVVSLIQERY 257
             KR  Y  A+  FQ +  +         A+    + E Y+      +AR V     E+Y
Sbjct: 144 VEKR--YDKALKSFQSLQND-----AVYAALVPYYIGEIYLVKGNYQQARTVAKAYLEQY 196

Query: 258 P 258
           P
Sbjct: 197 P 197


>gi|294775054|ref|ZP_06740583.1| putative tol-pal system protein YbgF [Bacteroides vulgatus PC510]
 gi|294451098|gb|EFG19569.1| putative tol-pal system protein YbgF [Bacteroides vulgatus PC510]
          Length = 960

 Score = 62.1 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 72/222 (32%), Gaps = 46/222 (20%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D          +YE+   F++ ++ + A   FN   + FP + VAR++      + Y   
Sbjct: 567 DYPESQYMDDALYEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAANEIGLLYYQDD 626

Query: 109 KYQQAASLGEEYITQYPESKNV------------------DYVYYLVGMSYAQMIRDVPY 150
           KY +A    ++ I  YP S+                    +Y  +   +           
Sbjct: 627 KYPEAIQAYKQVIAGYPGSEEARLAQRDLKSIYIDLNKVDEYANFASTIPGGANFDVNER 686

Query: 151 D------------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           D            +          +R ++ +    +   A +Y+ +              
Sbjct: 687 DSLTYVAAERVYMRGEVAEARNSFTRYLQTFPEGAFSLNANYYIGLID------------ 734

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE-AYVA 239
               +  Y +A      VL  Y + +++E+AM    E AY A
Sbjct: 735 --YNQKAYESAARHLDKVLE-YPNNKYSEDAMLMGAEMAYTA 773



 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 73/214 (34%), Gaps = 26/214 (12%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLG 117
           +Y     + K++N+  A  +F +            ++          +   +++QA    
Sbjct: 467 LYNLGYTYFKQKNYGNAGTWFTRFVDRGSINERTMQADAYNRIGDCNFYDRRFEQARQDY 526

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
              +   P     DY  Y         +R +  D       +Q ++R++  Y  S Y+  
Sbjct: 527 ARAVEIDPS--LGDYSLYQEA-----FVRGLQRD---YNGKVQTLNRLISDYPESQYMDD 576

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           A                E GR +++  +   AI RF +++  + ++  A  A   +   Y
Sbjct: 577 AL--------------YEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAANEIGLLY 622

Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
                  EA +    +   YP    AR  +  +K
Sbjct: 623 YQDDKYPEAIQAYKQVIAGYPGSEEARLAQRDLK 656



 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 29/59 (49%), Gaps = 1/59 (1%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y   ++   ++ +  A  + ++    +P    +  ++LM A + Y+A  Y++A  + ++
Sbjct: 728 YYIGLIDYNQKAYESAARHLDKVLE-YPNNKYSEDAMLMGAEMAYTAKDYEKALHIYKQ 785



 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 76/233 (32%), Gaps = 31/233 (13%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A         ++A   F +  + FP    +  +      + Y+   Y+ AA   ++ 
Sbjct: 691 YVAAERVYMRGEVAEARNSFTRYLQTFPEGAFSLNANYYIGLIDYNQKAYESAARHLDKV 750

Query: 121 ITQYPESKNVDYVY------------YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +  YP +K  +               Y   +   + ++D        +L    M R    
Sbjct: 751 LE-YPNNKYSEDAMLMGAEMAYTAKDYEKALHIYKQLKDKAASMERRRLAKTGMLRSAHM 809

Query: 169 YTNSPYVKGARFYVTVGRNQLAAK----EVEIGRYYLKRGEYVAAIPRFQLVLANY---- 220
             N   +      +    + LA      E+    +Y +   Y+ A       + +     
Sbjct: 810 LGNEEEI------IFAATDLLADTKLAPELSNEAHYYRAKAYLDAGK-TDGAMEDLKVLA 862

Query: 221 SDAEHAE--EAMARLVEAYVALALMDEA-REVVSLIQERYPQGYWARYVETLV 270
            D  +    EA  ++ + Y      D+A +EV++ I+   P  YW      L+
Sbjct: 863 KDTRNVYGAEAKYKVAQIYFDGGQTDKAEQEVLNYIEVSTPHTYWLARSFVLL 915



 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 20/153 (13%), Positives = 45/153 (29%), Gaps = 24/153 (15%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +YE  + +     +SKA     + +       +++ + L       +  +  +A    E+
Sbjct: 241 LYELGMSYYYTGVYSKAAATLGEMASVH--DALSQNAYLHMGLAYLNLKERNRARMAFEQ 298

Query: 120 YITQYPESKNV-DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
               +     V +   Y   +   +               +    R +  + NSPY +  
Sbjct: 299 -AANFSFDPKVKEQALYNYALCIHETSYS------PFAESVTVFERFLNEFPNSPYTERV 351

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
             Y+                 Y+    Y AA+ 
Sbjct: 352 NDYLIEV--------------YMNTRSYEAALK 370


>gi|220935395|ref|YP_002514294.1| hypothetical protein Tgr7_2227 [Thioalkalivibrio sp. HL-EbGR7]
 gi|219996705|gb|ACL73307.1| conserved hypothetical protein [Thioalkalivibrio sp. HL-EbGR7]
          Length = 265

 Score = 62.1 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 53/135 (39%), Gaps = 8/135 (5%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           +   +++ Y  A   L+E  + ++   F +    +P +G+A  +       +Y +  +  
Sbjct: 136 NSAEEQQSYRAAFDLLREGRYEQSVSAFRRFLEAYPESGLASNAQYWLGEAKYVSRDFPS 195

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A +  E+ + QYP+S  V      +G ++ ++               + + ++   +  S
Sbjct: 196 ALTEFEKVLRQYPDSNKVADAQLKLGFTHYEL--------GQWDKARETLEQVRRDHAGS 247

Query: 173 PYVKGARFYVTVGRN 187
              + A   +   R+
Sbjct: 248 AVARLAEQRLQRMRD 262



 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 47/116 (40%), Gaps = 14/116 (12%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           +  +    R +E Y  S     A++++   +             Y+ R  + +A+  F+ 
Sbjct: 157 EQSVSAFRRFLEAYPESGLASNAQYWLGEAK-------------YVSRD-FPSALTEFEK 202

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           VL  Y D+    +A  +L   +  L   D+ARE +  ++  +     AR  E  ++
Sbjct: 203 VLRQYPDSNKVADAQLKLGFTHYELGQWDKARETLEQVRRDHAGSAVARLAEQRLQ 258


>gi|227114919|ref|ZP_03828575.1| hypothetical protein PcarbP_18240 [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 258

 Score = 62.1 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 46/135 (34%), Gaps = 9/135 (6%)

Query: 50  SVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           +          Y  AV   L+++ + +A   F    + +P +     +      + Y+ G
Sbjct: 130 APASTGDANTDYNAAVALVLEKKQYDQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKG 189

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           K   AA      +  YP+S         VG+        +  ++           ++V+ 
Sbjct: 190 KKDDAAYYFANVVKNYPKSPKSSEALLKVGV--------IMQEKGQADKAKAVYQQVVKM 241

Query: 169 YTNSPYVKGARFYVT 183
           Y N+   K A+  + 
Sbjct: 242 YPNTESAKQAQKRLA 256



 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 40/112 (35%), Gaps = 14/112 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             +      V++Y +S Y   A +++                    +G+   A   F  V
Sbjct: 156 QAISAFQAFVKKYPDSTYQPNANYWLGQLN--------------YNKGKKDDAAYYFANV 201

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           + NY  +  + EA+ ++          D+A+ V   + + YP    A+  + 
Sbjct: 202 VKNYPKSPKSSEALLKVGVIMQEKGQADKAKAVYQQVVKMYPNTESAKQAQK 253



 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 46/127 (36%), Gaps = 22/127 (17%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +Y QA S  + ++ +YP+S       Y +G       +              Y + +V+
Sbjct: 152 KQYDQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYFANVVK 203

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y  SP    A   V V                 ++G+   A   +Q V+  Y + E A+
Sbjct: 204 NYPKSPKSSEALLKVGVIMQ--------------EKGQADKAKAVYQQVVKMYPNTESAK 249

Query: 228 EAMARLV 234
           +A  RL 
Sbjct: 250 QAQKRLA 256



 Score = 44.3 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 2/71 (2%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           L++ +Y  AI  FQ  +  Y D+ +   A   L +        D+A    + + + YP+ 
Sbjct: 149 LEKKQYDQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFANVVKNYPKS 208

Query: 261 YWARYVETLVK 271
              +  E L+K
Sbjct: 209 --PKSSEALLK 217


>gi|317476438|ref|ZP_07935687.1| tetratricopeptide [Bacteroides eggerthii 1_2_48FAA]
 gi|316907464|gb|EFV29169.1| tetratricopeptide [Bacteroides eggerthii 1_2_48FAA]
          Length = 1010

 Score = 62.1 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 41/229 (17%), Positives = 79/229 (34%), Gaps = 45/229 (19%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
             +YEK   +++ +N S+A   F +    +P + V+RK+      + Y    Y +A    
Sbjct: 629 NALYEKGRSYVQSRNNSQAIATFRELLNKYPESPVSRKAAAEIGLLYYQNDDYDRAIEAY 688

Query: 118 EEYITQYPESKNVDYVY------Y---------------LVGMSYAQMIRDVPYDQRATK 156
           +  IT+YP S+            Y               + G    +          A +
Sbjct: 689 KHVITKYPGSEEARLAMRDLKSIYVEANRVDEFAALAAQMPGAIRFEPSEQDSLTYIAAE 748

Query: 157 L---------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
                          +R ++ Y N  +   A +Y+++       KE         + + V
Sbjct: 749 KVYMKGELTPAKASFTRYLQSYPNGAFSLNAHYYLSII-----GKE---------QKDEV 794

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           A +     +L  Y D+ ++EEA+    E        ++A      +Q R
Sbjct: 795 AVLEHAGKLLE-YPDSPYSEEALLMRGEILFNHKEYEQAMADYKQLQAR 842



 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 75/218 (34%), Gaps = 26/218 (11%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQA 113
           Y    Y  A +   +++++ A + F +  +          +            A ++ +A
Sbjct: 516 YALAYYNLAYIAFHKKDYATAQDRFQKFIQLQKSGDATVLADAYNRIGDCHMQARRFDEA 575

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
                        +   DY YY + +        V   Q+     +  ++++  +Y NSP
Sbjct: 576 KQYYTRAENL--GTPAGDYSYYQLAL--------VAGLQKNYDGKVALLNQLANKYPNSP 625

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
           Y            N L  K    GR Y++      AI  F+ +L  Y ++  + +A A +
Sbjct: 626 YA----------INALYEK----GRSYVQSRNNSQAIATFRELLNKYPESPVSRKAAAEI 671

Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
              Y      D A E    +  +YP    AR     +K
Sbjct: 672 GLLYYQNDDYDRAIEAYKHVITKYPGSEEARLAMRDLK 709



 Score = 59.4 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 68/211 (32%), Gaps = 41/211 (19%)

Query: 44  RDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDF-PFAGVARKSLLMSA 101
           + + L    D     + Y +     ++ + F +A +Y+ +      P             
Sbjct: 542 KFIQLQKSGDATVLADAYNRIGDCHMQARRFDEAKQYYTRAENLGTPAGD---------- 591

Query: 102 FVQYS-------AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           +  Y           Y    +L  +   +YP S       Y  G SY Q         R 
Sbjct: 592 YSYYQLALVAGLQKNYDGKVALLNQLANKYPNSPYAINALYEKGRSYVQS--------RN 643

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
               +     ++ +Y  SP  + A                EIG  Y +  +Y  AI  ++
Sbjct: 644 NSQAIATFRELLNKYPESPVSRKAAA--------------EIGLLYYQNDDYDRAIEAYK 689

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDE 245
            V+  Y  +E A  AM  L   YV    +DE
Sbjct: 690 HVITKYPGSEEARLAMRDLKSIYVEANRVDE 720



 Score = 42.0 bits (98), Expect = 0.086,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 72/254 (28%), Gaps = 59/254 (23%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD-------FPFAGVARKSLLMSAFVQ 104
                 R +YE+     +++ F+ A        +         P AG   ++  M    +
Sbjct: 26  EKTTSPRRLYEEGQNLFRQKAFAAAMSPLQAFIKQTGAEGNPLPTAGEKEEAEYMLVCAE 85

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA-----------------QMIRD 147
           Y       +  L  EY+  YP++ + + +Y L+  +Y                   ++ +
Sbjct: 86  YELR-SPNSIELLREYLDTYPDTPHANRIYALIASAYFFEGKYDDALAMFNSARLDLLGN 144

Query: 148 VPYDQ------------RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE-- 193
              D                K    +   +  R T+S Y     +Y++  R      +  
Sbjct: 145 EERDDMTYRLATCYLKTGNVKEAAIWFETL--RSTSSKYAADCTYYLSYIRYSQQRYDDA 202

Query: 194 ------------------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
                               I   YL +  Y  A    Q  L+ Y   ++  E       
Sbjct: 203 LSGFLSLQDNAKYKVLVPYYIAEIYLIKKNYDKAEIVAQNYLSAYPGQKYTGEMYRIQGT 262

Query: 236 AYVALALMDEAREV 249
           A        EA + 
Sbjct: 263 ADYHFGKYHEAVKA 276



 Score = 35.5 bits (81), Expect = 9.1,   Method: Composition-based stats.
 Identities = 29/226 (12%), Positives = 57/226 (25%), Gaps = 67/226 (29%)

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            E   +    +P    A +   + A   +  GKY  A ++          ++  D + Y 
Sbjct: 94  IELLREYLDTYPDTPHANRIYALIASAYFFEGKYDDALAMFNSARLDLLGNEERDDMTYR 153

Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE--- 193
           +   Y +            K    +   +  R T+S Y     +Y++  R      +   
Sbjct: 154 LATCYLKT--------GNVKEAAIWFETL--RSTSSKYAADCTYYLSYIRYSQQRYDDAL 203

Query: 194 -----------------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA---------- 226
                              I   YL +  Y  A    Q  L+ Y   ++           
Sbjct: 204 SGFLSLQDNAKYKVLVPYYIAEIYLIKKNYDKAEIVAQNYLSAYPGQKYTGEMYRIQGTA 263

Query: 227 ---------------------------EEAMARLVEAYVALALMDE 245
                                       +A+  L  +Y    +  +
Sbjct: 264 DYHFGKYHEAVKAFGHYLKDNAEPAARRDALYMLGMSYYRTGVYSQ 309


>gi|62179324|ref|YP_215741.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|224582569|ref|YP_002636367.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|62126957|gb|AAX64660.1| putative periplasmic protein [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|224467096|gb|ACN44926.1| hypothetical protein SPC_0751 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|322713795|gb|EFZ05366.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
          Length = 262

 Score = 62.1 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 21/156 (13%), Positives = 48/156 (30%), Gaps = 9/156 (5%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89
           +           +      +          Y  A+  +++++    A   F    + +P 
Sbjct: 115 SGAATTATPAPDAGTATSGAPVQSGDANTDYNAAIALVQDKSRQDDAIVAFQNFIKKYPD 174

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +     +      + Y+ GK   AA      +  YP+S       Y VG+        + 
Sbjct: 175 STYQPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGV--------IM 226

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            D+  T        +++ +Y  +   K A+  +   
Sbjct: 227 QDKGDTAKAKAVYQQVINKYPGTDGAKQAQKRLNAM 262



 Score = 51.3 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      +++Y +S Y   A +++              G
Sbjct: 141 ANTDYNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWL--------------G 186

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           +    +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 187 QLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVINKY 246

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 247 PGTDGAKQAQK 257



 Score = 49.0 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I +YP+S       Y +G       +              Y + +V+ Y 
Sbjct: 159 DDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 210

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A + V V                  +G+   A   +Q V+  Y   + A++A 
Sbjct: 211 KSPKAADAMYKVGVIMQ--------------DKGDTAKAKAVYQQVINKYPGTDGAKQAQ 256

Query: 231 ARL 233
            RL
Sbjct: 257 KRL 259


>gi|16764120|ref|NP_459735.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|161615016|ref|YP_001588981.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|167995343|ref|ZP_02576433.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168240608|ref|ZP_02665540.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|168264360|ref|ZP_02686333.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|168467687|ref|ZP_02701524.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|194442204|ref|YP_002039991.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194449345|ref|YP_002044784.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|197261877|ref|ZP_03161951.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|16419260|gb|AAL19694.1| putative periplasmic protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|161364380|gb|ABX68148.1| hypothetical protein SPAB_02776 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194400867|gb|ACF61089.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194407649|gb|ACF67868.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|195629168|gb|EDX48536.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197240132|gb|EDY22752.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|205326988|gb|EDZ13752.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205339982|gb|EDZ26746.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205347197|gb|EDZ33828.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|261246013|emb|CBG23815.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267992491|gb|ACY87376.1| hypothetical protein STM14_0872 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301157341|emb|CBW16830.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312911777|dbj|BAJ35751.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|321226329|gb|EFX51380.1| TPR repeat containing exported protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|323129062|gb|ADX16492.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|332987687|gb|AEF06670.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 262

 Score = 62.1 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 21/156 (13%), Positives = 48/156 (30%), Gaps = 9/156 (5%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89
           +           +      +          Y  A+  +++++    A   F    + +P 
Sbjct: 115 SGAATTATPAPDAGTATSGAPVQSGDANTDYNAAIALVQDKSRQDDAIVAFQNFIKKYPD 174

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +     +      + Y+ GK   AA      +  YP+S       Y VG+        + 
Sbjct: 175 STYQPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGV--------IM 226

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            D+  T        +++ +Y  +   K A+  +   
Sbjct: 227 QDKGDTAKAKAVYQQVINKYPGTDGAKQAQKRLNAM 262



 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      +++Y +S Y   A +++              G
Sbjct: 141 ANTDYNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWL--------------G 186

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           +    +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 187 QLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVINKY 246

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 247 PGTDGAKQAQK 257



 Score = 49.0 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I +YP+S       Y +G       +              Y + +V+ Y 
Sbjct: 159 DDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 210

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A + V V                  +G+   A   +Q V+  Y   + A++A 
Sbjct: 211 KSPKAADAMYKVGVIMQ--------------DKGDTAKAKAVYQQVINKYPGTDGAKQAQ 256

Query: 231 ARL 233
            RL
Sbjct: 257 KRL 259


>gi|303256188|ref|ZP_07342204.1| putative tol-pal system protein YbgF [Burkholderiales bacterium
           1_1_47]
 gi|331001244|ref|ZP_08324870.1| tol-pal system protein YbgF [Parasutterella excrementihominis YIT
           11859]
 gi|302860917|gb|EFL83992.1| putative tol-pal system protein YbgF [Burkholderiales bacterium
           1_1_47]
 gi|329568971|gb|EGG50767.1| tol-pal system protein YbgF [Parasutterella excrementihominis YIT
           11859]
          Length = 230

 Score = 62.1 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 53/130 (40%), Gaps = 9/130 (6%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           ++  ++E+ ++ +   ++ + ++A + F+  ++ +    V   +L       Y  G + Q
Sbjct: 110 EISAKQEL-DRCLSVFQKGDANQAIKCFSGMTQKYSKTKVYPDALYWLGSSYYMKGNFAQ 168

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
             +  +  I+ Y +   V   Y LVGM+          D + T        ++++ Y  S
Sbjct: 169 TIATEQRLISGYSKHAKVPEAYLLVGMAQM--------DSKKTAEAKATFDKLIKLYPKS 220

Query: 173 PYVKGARFYV 182
                A+  +
Sbjct: 221 SAAGLAKKQM 230


>gi|218131427|ref|ZP_03460231.1| hypothetical protein BACEGG_03045 [Bacteroides eggerthii DSM 20697]
 gi|217986359|gb|EEC52696.1| hypothetical protein BACEGG_03045 [Bacteroides eggerthii DSM 20697]
          Length = 1010

 Score = 62.1 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 41/229 (17%), Positives = 79/229 (34%), Gaps = 45/229 (19%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
             +YEK   +++ +N S+A   F +    +P + V+RK+      + Y    Y +A    
Sbjct: 629 NALYEKGRSYVQSRNNSQAIATFRELLNKYPESPVSRKAAAEIGLLYYQNDDYDRAIEAY 688

Query: 118 EEYITQYPESKNVDYVY------Y---------------LVGMSYAQMIRDVPYDQRATK 156
           +  IT+YP S+            Y               + G    +          A +
Sbjct: 689 KHVITKYPGSEEARLAMRDLKSIYVEANRVDEFAALAAQMPGAIRFEPSEQDSLTYIAAE 748

Query: 157 L---------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
                          +R ++ Y N  +   A +Y+++       KE         + + V
Sbjct: 749 KVYMKGELTPAKASFTRYLQSYPNGAFSLNAHYYLSII-----GKE---------QKDEV 794

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           A +     +L  Y D+ ++EEA+    E        ++A      +Q R
Sbjct: 795 AVLEHAGKLLE-YPDSPYSEEALLMRGEILFNHKEYEQAMADYKQLQAR 842



 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 68/211 (32%), Gaps = 41/211 (19%)

Query: 44  RDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDF-PFAGVARKSLLMSA 101
           + + L    D     + Y +     ++ + F +A +Y+ +      P             
Sbjct: 542 KFIQLQKSGDATVLADAYNRIGDCHMQARRFDEAKQYYTRAENLGTPAGD---------- 591

Query: 102 FVQYS-------AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           +  Y           Y    +L  +   +YP S       Y  G SY Q         R 
Sbjct: 592 YSYYQLALVAGLQKNYDGKVALLNQLANKYPNSPYAINALYEKGRSYVQS--------RN 643

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
               +     ++ +Y  SP  + A                EIG  Y +  +Y  AI  ++
Sbjct: 644 NSQAIATFRELLNKYPESPVSRKAAA--------------EIGLLYYQNDDYDRAIEAYK 689

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDE 245
            V+  Y  +E A  AM  L   YV    +DE
Sbjct: 690 HVITKYPGSEEARLAMRDLKSIYVEANRVDE 720



 Score = 59.0 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 75/218 (34%), Gaps = 26/218 (11%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQA 113
           Y    Y  A +   +++++ A + F +  +          +            A ++ +A
Sbjct: 516 YALAYYNLAYITFHKKDYATAQDRFQKFIQLQKSGDATVLADAYNRIGDCHMQARRFDEA 575

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
                        +   DY YY + +        V   Q+     +  ++++  +Y NSP
Sbjct: 576 KQYYTRAENL--GTPAGDYSYYQLAL--------VAGLQKNYDGKVALLNQLANKYPNSP 625

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
           Y            N L  K    GR Y++      AI  F+ +L  Y ++  + +A A +
Sbjct: 626 YA----------INALYEK----GRSYVQSRNNSQAIATFRELLNKYPESPVSRKAAAEI 671

Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
              Y      D A E    +  +YP    AR     +K
Sbjct: 672 GLLYYQNDDYDRAIEAYKHVITKYPGSEEARLAMRDLK 709



 Score = 42.8 bits (100), Expect = 0.056,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 72/254 (28%), Gaps = 59/254 (23%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD-------FPFAGVARKSLLMSAFVQ 104
                 + +YE+     +++ F+ A        +         P AG   ++  M    +
Sbjct: 26  EKTTSPQRLYEEGQNLFRQKAFAAAMSPLQAFIKQTGAEGNPLPTAGEKEEAEYMLVCAE 85

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA-----------------QMIRD 147
           Y       +  L  EY+  YP++ + + +Y L+  +Y                   ++ +
Sbjct: 86  YELR-SPNSIELLREYLDTYPDTPHANRIYALIASAYFFEGKYDDALAMFNSARLDLLGN 144

Query: 148 VPYDQ------------RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE-- 193
              D                K    +   +  R T+S Y     +Y++  R      +  
Sbjct: 145 EERDDMTYRLATCYLKTGNVKEAAIWFETL--RSTSSKYAADCTYYLSYIRYSQQRYDDA 202

Query: 194 ------------------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
                               I   YL +  Y  A    Q  L+ Y   ++  E       
Sbjct: 203 LSGFLSLQDNAKYKALVPYYIAEIYLIKKNYDKAEIVAQNYLSAYPGQKYTGEMYRIQGT 262

Query: 236 AYVALALMDEAREV 249
           A        EA + 
Sbjct: 263 ADYHFGKYHEAVKA 276



 Score = 35.1 bits (80), Expect = 9.4,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 58/185 (31%), Gaps = 27/185 (14%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A  +LK  N  +A  +F         +  A       ++++YS  +Y  A S    +
Sbjct: 152 YRLATCYLKTGNVKEAAIWFETLRST--SSKYAADCTYYLSYIRYSQQRYDDALSG---F 206

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           ++    +K    V Y +   Y          ++            +  Y    Y     +
Sbjct: 207 LSLQDNAKYKALVPYYIAEIY--------LIKKNYDKAEIVAQNYLSAYPGQKYTGEM-Y 257

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
            +                Y+   G+Y  A+  F   L + ++     +A+  L  +Y   
Sbjct: 258 RIQG-----------TADYHF--GKYHEAVKAFGHYLKDNAEPAARRDALYMLGMSYYRT 304

Query: 241 ALMDE 245
            +  +
Sbjct: 305 GVYSQ 309


>gi|56414133|ref|YP_151208.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|168820115|ref|ZP_02832115.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|197249869|ref|YP_002145711.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197363055|ref|YP_002142692.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|198246203|ref|YP_002214720.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|205352014|ref|YP_002225815.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207856194|ref|YP_002242845.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|238911683|ref|ZP_04655520.1| hypothetical protein SentesTe_11172 [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|56128390|gb|AAV77896.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197094532|emb|CAR60052.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|197213572|gb|ACH50969.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197940719|gb|ACH78052.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|205271795|emb|CAR36629.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205343137|gb|EDZ29901.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|206707997|emb|CAR32286.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|320085021|emb|CBY94810.1| Uncharacterized protein ybgF Flags: Precursor [Salmonella enterica
           subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|326622476|gb|EGE28821.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|326627055|gb|EGE33398.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 262

 Score = 62.1 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 21/156 (13%), Positives = 48/156 (30%), Gaps = 9/156 (5%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89
           +           +      +          Y  A+  +++++    A   F    + +P 
Sbjct: 115 SGTATTATPAPDAGTATSGAPVQSGDANTDYNAAIALVQDKSRQDDAIVAFQNFIKKYPD 174

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +     +      + Y+ GK   AA      +  YP+S       Y VG+        + 
Sbjct: 175 STYQPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGV--------IM 226

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            D+  T        +++ +Y  +   K A+  +   
Sbjct: 227 QDKGDTAKAKAVYQQVINKYPGTDGAKQAQKRLNAM 262



 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      +++Y +S Y   A +++               
Sbjct: 141 ANTDYNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLN----------- 189

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
                +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 190 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVINKY 246

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 247 PGTDGAKQAQK 257



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I +YP+S       Y +G       +              Y + +V+ Y 
Sbjct: 159 DDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 210

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A + V V                  +G+   A   +Q V+  Y   + A++A 
Sbjct: 211 KSPKAADAMYKVGVIMQ--------------DKGDTAKAKAVYQQVINKYPGTDGAKQAQ 256

Query: 231 ARL 233
            RL
Sbjct: 257 KRL 259


>gi|104783065|ref|YP_609563.1| hypothetical protein PSEEN4085 [Pseudomonas entomophila L48]
 gi|95112052|emb|CAK16779.1| conserved hypothetical protein [Pseudomonas entomophila L48]
          Length = 269

 Score = 62.1 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 49/136 (36%), Gaps = 8/136 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D   ++  YE A   +K+++F KA + F    R +P +  A  +      V  + G 
Sbjct: 142 EPGDPAKEKLFYEAAFDLIKQKDFDKASQAFAAFLRKYPNSQYAGNAQYWLGEVNLAKGD 201

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            Q A     +    YP+   V    Y +         DV      T  +   + +++ +Y
Sbjct: 202 LQGAGQAFAKVSQLYPQHSKVPDSLYKLA--------DVERRMGHTDKVKGILQQVITQY 253

Query: 170 TNSPYVKGARFYVTVG 185
             +   + A+  +   
Sbjct: 254 PGTSAAQLAQRDLQKL 269



 Score = 52.8 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 45/120 (37%), Gaps = 14/120 (11%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           Q+      Q  +  + +Y NS Y   A++++      LA  +++             A  
Sbjct: 162 QKDFDKASQAFAAFLRKYPNSQYAGNAQYWLGEVN--LAKGDLQ------------GAGQ 207

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
            F  V   Y       +++ +L +    +   D+ + ++  +  +YP    A+  +  ++
Sbjct: 208 AFAKVSQLYPQHSKVPDSLYKLADVERRMGHTDKVKGILQQVITQYPGTSAAQLAQRDLQ 267


>gi|85858811|ref|YP_461013.1| TPR repeat-containing protein [Syntrophus aciditrophicus SB]
 gi|85721902|gb|ABC76845.1| tetratricopeptide repeat domain protein [Syntrophus aciditrophicus
           SB]
          Length = 836

 Score = 62.1 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 72/213 (33%), Gaps = 27/213 (12%)

Query: 52  TDVRYQREV--YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
            D+R + ++  +  A    +  N+ +AY  +    R +P +   +  L     + Y  G+
Sbjct: 262 PDLRSRNDLVNFRLAECLEQAGNYEEAYAAYEDVIRKYPTSRYKQDVLYKMGEILYRTGR 321

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ--RATKLMLQYMSRIVE 167
           +  A      Y+  YP+        +L+G  + Q  R        R           +  
Sbjct: 322 FTHAIEKLRNYLAGYPDGPYASRSSFLLGYCFQQTGRQTDGALWYRNALNKWDNFEELPA 381

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
                              + L   ++ +  +  +  +Y  A   F   L  Y +    +
Sbjct: 382 -------------------DVL--YDLGLTLFSWQ--DYSRAASLFATYLNLYPEGGSKK 418

Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            AM  L  ++  L     A +V SL+ E YP+ 
Sbjct: 419 SAMFYLGRSFYTLNRFASALKVFSLLLENYPES 451



 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 65/215 (30%), Gaps = 41/215 (19%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
           R++ R+  + +  D    R V+E A +      + +A    +              +LL 
Sbjct: 171 RKTGRESDVKNSLDSPSPR-VFETANIHFDACRYERAAAILSSIVSK----KHNDDALLE 225

Query: 100 -----SAFVQY-----SAGKYQQ-AASLGEEYITQYP--ESKNVDYVYYLVGMSYAQMIR 146
                 A   +       G +   A    +  + +YP   S+N D V + +     Q   
Sbjct: 226 NSLRLLADCYFFLGKGKDGSFNLKAVDAYKHILRRYPDLRSRN-DLVNFRLAECLEQA-- 282

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
                    +        ++ +Y  S Y +   + +                   + G +
Sbjct: 283 ------GNYEEAYAAYEDVIRKYPTSRYKQDVLYKMGEIL--------------YRTGRF 322

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
             AI + +  LA Y D  +A  +   L   +    
Sbjct: 323 THAIEKLRNYLAGYPDGPYASRSSFLLGYCFQQTG 357



 Score = 59.0 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 63/199 (31%), Gaps = 35/199 (17%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
            DV     T    Q  +Y+   +  +   F+ A E        +P    A +S  +  + 
Sbjct: 293 EDVIRKYPTSRYKQDVLYKMGEILYRTGRFTHAIEKLRNYLAGYPDGPYASRSSFLLGYC 352

Query: 104 QYSAGK-------YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
               G+       Y+ A +  + +    P       V Y +G++     +D         
Sbjct: 353 FQQTGRQTDGALWYRNALNKWDNFEEL-PAD-----VLYDLGLTLFSW-QDYSR------ 399

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                 +  +  Y      K A                 +GR +     + +A+  F L+
Sbjct: 400 -AASLFATYLNLYPEGGSKKSAM--------------FYLGRSFYTLNRFASALKVFSLL 444

Query: 217 LANYSDAEHAEEAMARLVE 235
           L NY ++  A E++  +  
Sbjct: 445 LENYPESGEAYESILFMAN 463



 Score = 49.3 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 35/115 (30%), Gaps = 15/115 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKG-ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
             +     I+ RY +         F +     Q    E            Y A    ++ 
Sbjct: 249 KAVDAYKHILRRYPDLRSRNDLVNFRLAECLEQAGNYE----------EAYAA----YED 294

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
           V+  Y  + + ++ + ++ E          A E +      YP G +A     L+
Sbjct: 295 VIRKYPTSRYKQDVLYKMGEILYRTGRFTHAIEKLRNYLAGYPDGPYASRSSFLL 349


>gi|83647594|ref|YP_436029.1| hypothetical protein HCH_04913 [Hahella chejuensis KCTC 2396]
 gi|83635637|gb|ABC31604.1| uncharacterized protein conserved in bacteria [Hahella chejuensis
           KCTC 2396]
          Length = 278

 Score = 62.1 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 59/151 (39%), Gaps = 8/151 (5%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
                + + ++  +       +++ Y++A   +K + + KA E  +   +  P + ++  
Sbjct: 136 SASSGEETLELTPNKAPPSAAEQQEYDQAFDLIKRREYDKAVEALHAFIKKHPDSELSAN 195

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +      V     K +QA       + +YPE +      Y +G++Y ++  +        
Sbjct: 196 AYYWLGEVYLVIPKLEQARQAFVVVVGKYPEHRKAPDAMYKLGVTYHRLGDNA------- 248

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
               +Y+S  V R+  +     A+ Y+   +
Sbjct: 249 -EAKKYLSETVSRFPGTSPANLAKDYLRQVQ 278



 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 50/130 (38%), Gaps = 19/130 (14%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
             +I+   YD       ++ +   ++++ +S     A +++              G  YL
Sbjct: 165 FDLIKRREYD-----KAVEALHAFIKKHPDSELSANAYYWL--------------GEVYL 205

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
              +   A   F +V+  Y +   A +AM +L   Y  L    EA++ +S    R+P   
Sbjct: 206 VIPKLEQARQAFVVVVGKYPEHRKAPDAMYKLGVTYHRLGDNAEAKKYLSETVSRFPGTS 265

Query: 262 WARYVETLVK 271
            A   +  ++
Sbjct: 266 PANLAKDYLR 275


>gi|323524836|ref|YP_004226989.1| tol-pal system protein YbgF [Burkholderia sp. CCGE1001]
 gi|323381838|gb|ADX53929.1| tol-pal system protein YbgF [Burkholderia sp. CCGE1001]
          Length = 249

 Score = 62.1 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 17/132 (12%), Positives = 49/132 (37%), Gaps = 8/132 (6%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
             + + +  A    +  +F  A   F      +P +     +        Y+   Y+ + 
Sbjct: 126 PGETDAFNAASQQFRNGDFKNAAASFRSFISKYPNSPYQPTAQYWLGNALYALRDYKGST 185

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
           +  +  + +YP+         L+ ++  Q+ +     Q+A     + + +I+ +Y  S  
Sbjct: 186 ATWQGVVARYPQHPRAPEA--LLAIANNQLEQG----QKAA--ARKTLEQILAQYGGSDV 237

Query: 175 VKGARFYVTVGR 186
            + A+  ++  +
Sbjct: 238 AQSAQSKLSQIK 249



 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 37/109 (33%), Gaps = 14/109 (12%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         + +Y NSPY   A++++           +   R      +Y  +   
Sbjct: 142 GDFKNAAASFRSFISKYPNSPYQPTAQYWL--------GNALYALR------DYKGSTAT 187

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +Q V+A Y     A EA+  +    +       AR+ +  I  +Y    
Sbjct: 188 WQGVVARYPQHPRAPEALLAIANNQLEQGQKAAARKTLEQILAQYGGSD 236


>gi|187922762|ref|YP_001894404.1| tol-pal system protein YbgF [Burkholderia phytofirmans PsJN]
 gi|187713956|gb|ACD15180.1| tol-pal system protein YbgF [Burkholderia phytofirmans PsJN]
          Length = 252

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 47/126 (37%), Gaps = 8/126 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           +  A    +  +F  A   F      FP +     +        Y+   Y+ + +  +  
Sbjct: 135 FNAASQQFRNGDFKNAAASFRTFIAKFPNSPYQPTAQYWLGNALYALRDYKGSTATWQGV 194

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           + +YP+         L+ ++  Q+ +     Q+A     + + +IV +Y  S   + A+ 
Sbjct: 195 VQKYPQHPRAPEA--LLAIANNQLEQG----QKAA--AKKTLEQIVAQYGGSDVAQSAQS 246

Query: 181 YVTVGR 186
            ++  +
Sbjct: 247 KLSQIK 252



 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 36/109 (33%), Gaps = 14/109 (12%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         + ++ NSPY   A++++           +   R      +Y  +   
Sbjct: 145 GDFKNAAASFRTFIAKFPNSPYQPTAQYWL--------GNALYALR------DYKGSTAT 190

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +Q V+  Y     A EA+  +    +       A++ +  I  +Y    
Sbjct: 191 WQGVVQKYPQHPRAPEALLAIANNQLEQGQKAAAKKTLEQIVAQYGGSD 239



 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 51/132 (38%), Gaps = 22/132 (16%)

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           Q+  G ++ AA+    +I ++P S       Y +G +   +        R  K       
Sbjct: 141 QFRNGDFKNAAASFRTFIAKFPNSPYQPTAQYWLGNALYAL--------RDYKGSTATWQ 192

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
            +V++Y   P    A               + I    L++G+  AA    + ++A Y  +
Sbjct: 193 GVVQKYPQHPRAPEAL--------------LAIANNQLEQGQKAAAKKTLEQIVAQYGGS 238

Query: 224 EHAEEAMARLVE 235
           + A+ A ++L +
Sbjct: 239 DVAQSAQSKLSQ 250


>gi|319956171|ref|YP_004167434.1| hypothetical protein Nitsa_0415 [Nitratifractor salsuginis DSM
           16511]
 gi|319418575|gb|ADV45685.1| hypothetical protein Nitsa_0415 [Nitratifractor salsuginis DSM
           16511]
          Length = 218

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 58/185 (31%), Gaps = 9/185 (4%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
             +I    L G      +    +           Y+     +      KA + +     +
Sbjct: 9   LLAILTVTLGGCFGIGEKKQEYNKSAQAW-----YDAIQSSISHDELEKADKQYLSLRSE 63

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
              + +   ++L  A    +  +Y  A    +E++ +Y      +Y  +L   +    I 
Sbjct: 64  HIDSALLPTAMLALAQAHMADEEYLLANYYLDEFLKKYARGAWAEYARFLKLKASFLGIH 123

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE--IGRYYLKRG 204
           D+  DQ+     L         +  S Y    +  +     ++A   +   I   Y + G
Sbjct: 124 DINKDQKLVADTLAQCQSFYASHRGSRYAPLVQTMIVRL--EMAQYLLNADIAHLYDRIG 181

Query: 205 EYVAA 209
           +  AA
Sbjct: 182 KAEAA 186


>gi|158338709|ref|YP_001519886.1| TPR domain-containing protein [Acaryochloris marina MBIC11017]
 gi|158308950|gb|ABW30567.1| TPR domain protein [Acaryochloris marina MBIC11017]
          Length = 374

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 35/103 (33%), Gaps = 10/103 (9%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
              ++Y +     +  N+  A    NQ     P    A  S        Y   +Y+ A +
Sbjct: 247 TPDDLYVQGTDKFQRGNYQGAIADLNQSIDLNPQNAFAYNSR---GNAYYELQQYEDAIA 303

Query: 116 LGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATK 156
             ++ I   P     DY   Y+  G+++  M  +    Q   K
Sbjct: 304 QYDQAIALNP-----DYAEAYFNRGLAHQLMGNNAQAQQDHLK 341


>gi|295675610|ref|YP_003604134.1| tol-pal system protein YbgF [Burkholderia sp. CCGE1002]
 gi|295435453|gb|ADG14623.1| tol-pal system protein YbgF [Burkholderia sp. CCGE1002]
          Length = 249

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 50/132 (37%), Gaps = 8/132 (6%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
             + E +  A    +  +F  A   F      +P +     +        Y+   Y+ + 
Sbjct: 126 PGETEAFNAASQQFRSGDFKSAAASFRSFISKYPSSPYQPTAQYWLGNALYALRDYKGST 185

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
           ++ +  + +YP+         L+ ++  Q+ +     Q+A     + + +IV +Y  S  
Sbjct: 186 AVWQGIVAKYPQHPRAPEA--LLAIANNQLEQG----QKAA--AKKTLEQIVAQYAGSDV 237

Query: 175 VKGARFYVTVGR 186
            + A+  ++  +
Sbjct: 238 AQSAQSKLSQIK 249



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 35/109 (32%), Gaps = 14/109 (12%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         + +Y +SPY   A++++           +   R Y       A    
Sbjct: 142 GDFKSAAASFRSFISKYPSSPYQPTAQYWL--------GNALYALRDY---KGSTAVW-- 188

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            Q ++A Y     A EA+  +    +       A++ +  I  +Y    
Sbjct: 189 -QGIVAKYPQHPRAPEALLAIANNQLEQGQKAAAKKTLEQIVAQYAGSD 236


>gi|15838493|ref|NP_299181.1| hypothetical protein XF1895 [Xylella fastidiosa 9a5c]
 gi|9106988|gb|AAF84701.1|AE004009_8 conserved hypothetical protein [Xylella fastidiosa 9a5c]
          Length = 271

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/154 (12%), Positives = 49/154 (31%), Gaps = 10/154 (6%)

Query: 39  ERQSSRDVYLDSVTDVRYQRE--VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
             + S +++ D+        E   Y  A   LK   ++ A E F    + +P       +
Sbjct: 124 MSEQSPNIHGDASALTISNEERIAYNVAFDALKNSKYADAAELFLSFLQLYPNGVYTPNA 183

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
           L       Y+   +  A +     +++YP             +  A   ++         
Sbjct: 184 LYWLGESYYAMHDFVSAEAQFRSLLSRYPTHDKASGSLLKEALCQANQGKNDD------- 236

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
                + +++ +Y  +   + A+  +   +   A
Sbjct: 237 -AQHSLEQVLSQYPGTDAARLAQERLQSIKLSQA 269



 Score = 42.0 bits (98), Expect = 0.097,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 43/115 (37%), Gaps = 14/115 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              +     ++ Y N  Y   A +++              G  Y    ++V+A  +F+ +
Sbjct: 162 DAAELFLSFLQLYPNGVYTPNALYWL--------------GESYYAMHDFVSAEAQFRSL 207

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           L+ Y   + A  ++ +           D+A+  +  +  +YP    AR  +  ++
Sbjct: 208 LSRYPTHDKASGSLLKEALCQANQGKNDDAQHSLEQVLSQYPGTDAARLAQERLQ 262



 Score = 38.6 bits (89), Expect = 0.91,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 23/58 (39%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           LK  +Y  A   F   L  Y +  +   A+  L E+Y A+     A      +  RYP
Sbjct: 155 LKNSKYADAAELFLSFLQLYPNGVYTPNALYWLGESYYAMHDFVSAEAQFRSLLSRYP 212


>gi|46446024|ref|YP_007389.1| hypothetical protein pc0390 [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|46399665|emb|CAF23114.1| hypothetical protein pc0390 [Candidatus Protochlamydia amoebophila
           UWE25]
          Length = 468

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 54/148 (36%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A   +++     P + +   +L   A +      +++A    +  I ++P+ +     Y 
Sbjct: 151 ALTIYDEIIVAMPNSDMTVNALYSKAQLLQKMESFREAIETYQILIRRFPKHEMTPLCYL 210

Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
            +  SY+Q       +     L      +  E +      + A  YV   ++  A    +
Sbjct: 211 KIAESYSQQSVYEFQNPDILALAELNSRKFKEEFPREEKTELAERYVQRIKDMYAKGLCD 270

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDA 223
           +G +Y + G   AA   F+  +  + D 
Sbjct: 271 MGLFYERMGHPDAAAIYFRSSIEEFPDT 298



 Score = 41.3 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 30/80 (37%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           S    +       RY  + Y K   +  +QN+  A + F +    FP +  A ++     
Sbjct: 25  SKSRPFSSQQEAQRYLNQHYNKGCHYYNKQNWRFAMDEFEKVVYFFPNSTEAAEAYYYLG 84

Query: 102 FVQYSAGKYQQAASLGEEYI 121
              +   +Y  A +   +Y+
Sbjct: 85  VCYFERKEYDFANNAFSKYL 104



 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 36/121 (29%), Gaps = 32/121 (26%)

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            +    + Y+ Q+          Y  G  Y           +  +  +    ++V  + N
Sbjct: 31  SSQQEAQRYLNQH----------YNKGCHYYNK--------QNWRFAMDEFEKVVYFFPN 72

Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
           S     A +Y+ V               Y +R EY  A   F   L +       E+A+ 
Sbjct: 73  STEAAEAYYYLGVC--------------YFERKEYDFANNAFSKYLTSVEQPAFFEDAVH 118

Query: 232 R 232
            
Sbjct: 119 Y 119


>gi|226945711|ref|YP_002800784.1| tol-pal system YbgF-like protein [Azotobacter vinelandii DJ]
 gi|226720638|gb|ACO79809.1| tol-pal system YbgF-like protein [Azotobacter vinelandii DJ]
          Length = 273

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 47/136 (34%), Gaps = 8/136 (5%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
             D   ++  Y+ A   +K ++F KA + F      +P +  A  +      V  + G  
Sbjct: 146 PADPEKEKLYYDAAFDLIKTKDFEKASQAFTAFLHKYPNSQYAGNAQYWLGEVNLAKGDL 205

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           Q A          YP+   V    Y +         DV      T+     + +++ +Y 
Sbjct: 206 QGAGQAFARVSQNYPKHSKVPDSLYKLA--------DVERRLGNTEKAKSALQQVIAQYP 257

Query: 171 NSPYVKGARFYVTVGR 186
            +   + A+  +   R
Sbjct: 258 GTSAAQLAQRDLQTMR 273



 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 46/119 (38%), Gaps = 14/119 (11%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           +  +   Q  +  + +Y NS Y   A++++      LA  +++             A   
Sbjct: 166 KDFEKASQAFTAFLHKYPNSQYAGNAQYWLGEVN--LAKGDLQ------------GAGQA 211

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           F  V  NY       +++ +L +    L   ++A+  +  +  +YP    A+  +  ++
Sbjct: 212 FARVSQNYPKHSKVPDSLYKLADVERRLGNTEKAKSALQQVIAQYPGTSAAQLAQRDLQ 270


>gi|83746169|ref|ZP_00943223.1| Tol system periplasmic component YbgF [Ralstonia solanacearum
           UW551]
 gi|83727135|gb|EAP74259.1| Tol system periplasmic component YbgF [Ralstonia solanacearum
           UW551]
          Length = 232

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 17/129 (13%), Positives = 41/129 (31%), Gaps = 8/129 (6%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
             +++ Y+ A+   +  +F  A   F+   + +P +     +        Y+   Y+ + 
Sbjct: 109 PGEKDEYDAALKTFQGGDFKGAGNQFSAFVKKYPQSPYLPLAQFWLGNALYAQRDYKGST 168

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
            + E      P+          V              Q+A     + +  +V +Y  +  
Sbjct: 169 YVLENMARANPQHPKAPEALLQVA------TNQGESGQKAA--ARKTLEAVVVQYPGTEQ 220

Query: 175 VKGARFYVT 183
            K A   + 
Sbjct: 221 AKTASSRLK 229



 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 14/119 (11%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K      S  V++Y  SPY+  A+       N L          Y +R  Y  +   
Sbjct: 125 GDFKGAGNQFSAFVKKYPQSPYLPLAQ---FWLGNAL----------YAQRD-YKGSTYV 170

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
            + +         A EA+ ++            AR+ +  +  +YP    A+   + +K
Sbjct: 171 LENMARANPQHPKAPEALLQVATNQGESGQKAAARKTLEAVVVQYPGTEQAKTASSRLK 229


>gi|168230634|ref|ZP_02655692.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|168238900|ref|ZP_02663958.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|194471411|ref|ZP_03077395.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194736266|ref|YP_002113857.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|200389992|ref|ZP_03216603.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|194457775|gb|EDX46614.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194711768|gb|ACF90989.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197288322|gb|EDY27703.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|199602437|gb|EDZ00983.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205334782|gb|EDZ21546.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|322615816|gb|EFY12734.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322621375|gb|EFY18231.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322623632|gb|EFY20470.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322628906|gb|EFY25687.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322634884|gb|EFY31614.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322636588|gb|EFY33292.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322641773|gb|EFY38407.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322647829|gb|EFY44309.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322651361|gb|EFY47743.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322652662|gb|EFY49011.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322658643|gb|EFY54904.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322664928|gb|EFY61119.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322668403|gb|EFY64559.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322670509|gb|EFY66642.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322675249|gb|EFY71325.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322679675|gb|EFY75716.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322684849|gb|EFY80848.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323191724|gb|EFZ76977.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323200618|gb|EFZ85693.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323202289|gb|EFZ87337.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323205442|gb|EFZ90408.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323212130|gb|EFZ96955.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323216149|gb|EGA00878.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323221360|gb|EGA05779.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323226783|gb|EGA10974.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323230997|gb|EGA15113.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323234170|gb|EGA18259.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323238135|gb|EGA22193.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323243570|gb|EGA27588.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323251394|gb|EGA35266.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323260622|gb|EGA44231.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323264693|gb|EGA48195.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323270957|gb|EGA54392.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
          Length = 262

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 45/126 (35%), Gaps = 9/126 (7%)

Query: 61  YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A+  +++++    A   F    + +P +     +      + Y+ GK   AA     
Sbjct: 145 YNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFAS 204

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       Y VG+        +  D+  T        +++ +Y  +   K A+
Sbjct: 205 VVKNYPKSPKAADAMYKVGV--------IMQDKGDTAKAKAVYQQVINKYPGTDGAKQAQ 256

Query: 180 FYVTVG 185
             +   
Sbjct: 257 KRLNAM 262



 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      +++Y +S Y   A +++               
Sbjct: 141 ANTDYNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLN----------- 189

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
                +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 190 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVINKY 246

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 247 PGTDGAKQAQK 257



 Score = 49.0 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I +YP+S       Y +G       +              Y + +V+ Y 
Sbjct: 159 DDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 210

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A + V V                  +G+   A   +Q V+  Y   + A++A 
Sbjct: 211 KSPKAADAMYKVGVIMQ--------------DKGDTAKAKAVYQQVINKYPGTDGAKQAQ 256

Query: 231 ARL 233
            RL
Sbjct: 257 KRL 259


>gi|16759689|ref|NP_455306.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29142538|ref|NP_805880.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|167554284|ref|ZP_02348025.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|213427707|ref|ZP_03360457.1| hypothetical protein SentesTyphi_20229 [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213582021|ref|ZP_03363847.1| hypothetical protein SentesTyph_12824 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213857529|ref|ZP_03384500.1| hypothetical protein SentesT_20489 [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|25340111|pir||AB0593 probable exported protein STY0796 [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16501982|emb|CAD05212.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29138169|gb|AAO69740.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|205321484|gb|EDZ09323.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
          Length = 262

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 45/126 (35%), Gaps = 9/126 (7%)

Query: 61  YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A+  +++++    A   F    + +P +     +      + Y+ GK   AA     
Sbjct: 145 YNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFAS 204

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       Y VG+        +  D+  T        +++ +Y  +   K A+
Sbjct: 205 VVKNYPKSPKAADAMYKVGV--------IMQDKGDTAKAKAVYQQVINKYPGTDGAKQAQ 256

Query: 180 FYVTVG 185
             +   
Sbjct: 257 KRLNAM 262



 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      +++Y +S Y   A +++               
Sbjct: 141 ANTDYNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLN----------- 189

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
                +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 190 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVINKY 246

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 247 PGTDGAKQAQK 257



 Score = 49.0 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I +YP+S       Y +G       +              Y + +V+ Y 
Sbjct: 159 DDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 210

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A + V V                  +G+   A   +Q V+  Y   + A++A 
Sbjct: 211 KSPKAADAMYKVGVIMQ--------------DKGDTAKAKAVYQQVINKYPGTDGAKQAQ 256

Query: 231 ARL 233
            RL
Sbjct: 257 KRL 259


>gi|301062450|ref|ZP_07203102.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
 gi|300443450|gb|EFK07563.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
          Length = 313

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 50/184 (27%), Gaps = 31/184 (16%)

Query: 92  VARKS------LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
              +           A      G Y +A S  E +I  +P  + V     L+G+ Y    
Sbjct: 29  YTEQVVIDATGQFDFAHSLMDKGDYSRAISEFERFIYFFPTDRRVPQARQLIGLCYLND- 87

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
                         +  +        SP  K +               +  G  Y + G 
Sbjct: 88  -------GKFGEARKVFAACYRADPESPLAKKSL--------------LLTGESYYREGV 126

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
           Y  A   F  VL          EA+ RL    +      EA E    ++   P   +   
Sbjct: 127 YDKAEGFFGEVLKRDPSFSLRNEALYRLGWTRMQENRWREASEDFKRVE---PGSLFYEK 183

Query: 266 VETL 269
            + L
Sbjct: 184 ADRL 187



 Score = 45.9 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/129 (13%), Positives = 42/129 (32%), Gaps = 14/129 (10%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           ++ A   + + ++S+A   F +    FP      ++  +      + GK+ +A    + +
Sbjct: 41  FDFAHSLMDKGDYSRAISEFERFIYFFPTDRRVPQARQLIGLCYLNDGKFGEAR---KVF 97

Query: 121 ITQYPESKNVDYV---YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
              Y              L G SY +        +        +   +++R  +      
Sbjct: 98  AACYRADPESPLAKKSLLLTGESYYR--------EGVYDKAEGFFGEVLKRDPSFSLRNE 149

Query: 178 ARFYVTVGR 186
           A + +   R
Sbjct: 150 ALYRLGWTR 158



 Score = 45.1 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 50/130 (38%), Gaps = 11/130 (8%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
            TD R  +      + +L +  F +A + F  C R  P + +A+KSLL++    Y  G Y
Sbjct: 68  PTDRRVPQARQLIGLCYLNDGKFGEARKVFAACYRADPESPLAKKSLLLTGESYYREGVY 127

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
            +A     E + + P     +   Y +G +  Q  R         +   +   R+     
Sbjct: 128 DKAEGFFGEVLKRDPSFSLRNEALYRLGWTRMQENR--------WREASEDFKRVE---P 176

Query: 171 NSPYVKGARF 180
            S + + A  
Sbjct: 177 GSLFYEKADR 186


>gi|260597141|ref|YP_003209712.1| hypothetical protein CTU_13490 [Cronobacter turicensis z3032]
 gi|260216318|emb|CBA29306.1| Uncharacterized protein ybgF [Cronobacter turicensis z3032]
          Length = 236

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 47/126 (37%), Gaps = 9/126 (7%)

Query: 61  YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A+  +++++   +A   F+   + +P +     +      + Y+ GK   AA     
Sbjct: 119 YNAAIALVQDKSRQDEAITAFSNFIKQYPDSTYQPNAHYWLGQLNYNKGKKDDAAYYFAS 178

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       Y VG+        +  D+  T        +++ +Y  +   K A+
Sbjct: 179 VVKNYPKSPKAADAMYKVGV--------IMQDKGDTAKAKAVYQQVISKYPGTEGAKQAQ 230

Query: 180 FYVTVG 185
             +   
Sbjct: 231 KRLNAM 236



 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 44/123 (35%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
            +A +    +I QYP+S      +Y +G       +              Y + +V+ Y 
Sbjct: 133 DEAITAFSNFIKQYPDSTYQPNAHYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 184

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A + V V                  +G+   A   +Q V++ Y   E A++A 
Sbjct: 185 KSPKAADAMYKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTEGAKQAQ 230

Query: 231 ARL 233
            RL
Sbjct: 231 KRL 233



 Score = 49.0 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 44/131 (33%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +   S  +++Y +S Y   A +++               
Sbjct: 115 ANTDYNAAIALVQDKSRQDEAITAFSNFIKQYPDSTYQPNAHYWLGQLN----------- 163

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
                +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 164 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVISKY 220

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 221 PGTEGAKQAQK 231


>gi|291279228|ref|YP_003496063.1| hypothetical protein DEFDS_0831 [Deferribacter desulfuricans SSM1]
 gi|290753930|dbj|BAI80307.1| hypothetical protein [Deferribacter desulfuricans SSM1]
          Length = 647

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 65/198 (32%), Gaps = 29/198 (14%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK-----YQ 111
             +V  +A  ++    ++ A                A+++      V Y  G+     Y 
Sbjct: 136 AEKVLAEADEYVNNGLYNNAITKLLDLISTHKNDFYAQEAYYKLGMVYYKLGEDDPKNYL 195

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           +AA    ++ +++P+        Y   +S  +               +    R++  Y N
Sbjct: 196 KAADYLADFASKFPDHYLASDALYYSALSKEKA--------GMYYEAIFDYKRVILTYPN 247

Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
           +   K + F +                 Y   G+Y  AI   +     + D     E +A
Sbjct: 248 TLNAKKSYFKIVNI--------------YENIGQYDKAINALKEYSDKFEDNSV--EVLA 291

Query: 232 RLVEAYVALALMDEAREV 249
           R+ + Y  L  ++ A+E 
Sbjct: 292 RIGKLYFLLKDIELAKEY 309



 Score = 39.3 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 78/217 (35%), Gaps = 28/217 (12%)

Query: 53  DVRYQREVYEKAVLFLKEQ-----NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           D   Q   Y+  +++ K       N+ KA +Y    +  FP   +A  +L  SA  +  A
Sbjct: 169 DFYAQEAYYKLGMVYYKLGEDDPKNYLKAADYLADFASKFPDHYLASDALYYSALSKEKA 228

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           G Y +A    +  I  YP + N    Y+   ++  + I             +  +    +
Sbjct: 229 GMYYEAIFDYKRVILTYPNTLNAKKSYF-KIVNIYENIGQYD-------KAINALKEYSD 280

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
           ++ ++         +      L  K++E+ + Y      +  I +   +L    D     
Sbjct: 281 KFEDN--SVEVLARIGKLYFLL--KDIELAKEYF-----IKIIDKKNDILKLGPDT---- 327

Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
             +  + + +     +D A  + S I   YP+  +A 
Sbjct: 328 --LFAIAKTFEVKGEIDYAINIYSKIYNIYPESKYAD 362


>gi|209517618|ref|ZP_03266456.1| tol-pal system protein YbgF [Burkholderia sp. H160]
 gi|209501914|gb|EEA01932.1| tol-pal system protein YbgF [Burkholderia sp. H160]
          Length = 252

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/132 (13%), Positives = 50/132 (37%), Gaps = 8/132 (6%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
             + + +  A    +  +F  A   F      +P +     +        Y+   Y+ + 
Sbjct: 129 PGETDAFNAASQQFRSGDFKNAAASFRSFISKYPNSPYQPTAQYWLGNALYALRDYKGST 188

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
           ++ +  + +YP+         L+ ++  Q+ +     Q+A     + + +IV +Y  S  
Sbjct: 189 AVWQGVVAKYPQHPRAPEA--LLAIANNQLEQG----QKAA--AKKTLEQIVAQYGGSDV 240

Query: 175 VKGARFYVTVGR 186
            + A+  ++  +
Sbjct: 241 AQSAQSKLSQIK 252



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 35/109 (32%), Gaps = 14/109 (12%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         + +Y NSPY   A++++           +   R Y       A    
Sbjct: 145 GDFKNAAASFRSFISKYPNSPYQPTAQYWL--------GNALYALRDY---KGSTAVW-- 191

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            Q V+A Y     A EA+  +    +       A++ +  I  +Y    
Sbjct: 192 -QGVVAKYPQHPRAPEALLAIANNQLEQGQKAAAKKTLEQIVAQYGGSD 239


>gi|283780565|ref|YP_003371320.1| hypothetical protein Psta_2794 [Pirellula staleyi DSM 6068]
 gi|283439018|gb|ADB17460.1| Tetratricopeptide domain protein [Pirellula staleyi DSM 6068]
          Length = 789

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 68/200 (34%), Gaps = 17/200 (8%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
               A     +   +FP +G    +LL  A V  + G+ Q+A  +    ++    S    
Sbjct: 596 KLDLAAAMCQRLQTEFPESGFVDDALLQLAEVARTQGELQRAIGIFSRLVSM-QTSTLRG 654

Query: 132 YVYYLVGMSYAQMIRDVPYDQ--RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
              + V + Y  M          +      Q   ++ + + +S  V  A   +       
Sbjct: 655 EAQFGVALCYDDMSAKAEPAAAAQLQDRAFQEYKKVYDEFPDSGRVGEAVAKM------- 707

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
                    YY  + +Y  A+  F+ VLA+  DA+  +  +         +    EAR+ 
Sbjct: 708 -------ANYYYIQKDYARAVDTFETVLASQPDAKFLDVILFNYGRCLYRMERKAEARQR 760

Query: 250 VSLIQERYPQGYWARYVETL 269
              +   +P+   A   + +
Sbjct: 761 FDQLISEFPESPLAADAKKI 780



 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 33/87 (37%), Gaps = 10/87 (11%)

Query: 64  AVLFLKEQN-FSKAYEYFNQC---SRDFPFAGVARKSL--LMSAFVQYSAGKYQQAASLG 117
              +L  +  + +A  YF               A+++   L      Y A  Y +   + 
Sbjct: 101 GNFYLDRERAYDRARPYFESVAAEENR----DEAQRAEATLKLGICYYHARNYGKCFQIM 156

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQM 144
            + I  YP S  V+  YY +G+ + Q+
Sbjct: 157 RDVIEDYPVSPQVNEAYYYIGLGHFQL 183



 Score = 43.6 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 38/147 (25%), Gaps = 53/147 (36%)

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG-E 205
           D   D   T   ++    ++ERY  S +   A   +              G +YL R   
Sbjct: 65  DARLDAEETDKAVEIWKSVIERYPRSKHRFEASLRL--------------GNFYLDRERA 110

Query: 206 Y---------VAA------IPRF-----------------------QLVLANYSDAEHAE 227
           Y         VAA        R                        + V+ +Y  +    
Sbjct: 111 YDRARPYFESVAAEENRDEAQRAEATLKLGICYYHARNYGKCFQIMRDVIEDYPVSPQVN 170

Query: 228 EAMARLVEAYVALALMDEAREVVSLIQ 254
           EA   +   +  L     A   +  + 
Sbjct: 171 EAYYYIGLGHFQLGHYSRAISALEKVG 197



 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 34/90 (37%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           + VY +     R    V + A  +  ++++++A + F       P A      L      
Sbjct: 688 KKVYDEFPDSGRVGEAVAKMANYYYIQKDYARAVDTFETVLASQPDAKFLDVILFNYGRC 747

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYV 133
            Y   +  +A    ++ I+++PES      
Sbjct: 748 LYRMERKAEARQRFDQLISEFPESPLAADA 777


>gi|218886421|ref|YP_002435742.1| hypothetical protein DvMF_1325 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218757375|gb|ACL08274.1| TPR repeat-containing protein [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 1122

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 78/229 (34%), Gaps = 36/229 (15%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS--RDFPFAGVARKSLLMSAF 102
           D   + V       E+ E+A  F+   ++ KA E        RD P      + L +   
Sbjct: 453 DEKGNPVPAPPVPAELLEQAKTFMVNADYPKALELLETLKGLRDTPKDMY-EEVLYLIGD 511

Query: 103 VQYSAGK------YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
           V Y+  K      + +  +   E +    +S  V      +G+   ++          ++
Sbjct: 512 VLYAQNKDNILPVFDKIITATSEAMNYNLKSHRVPQALLRLGLLNTRI--------GNSQ 563

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
               Y + +  +Y +                 LA      G    KRG+Y  A  +FQ +
Sbjct: 564 EAEGYFNLLRRQYPHDENAA------------LAMY--YAGEEAYKRGDYQKAADKFQSI 609

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
           + ++ ++++  E    L      +    +A    S++   +    W R+
Sbjct: 610 VQDFPESKYVREGSVSLARTLYKMGYYQQA---ASILD--FVDKRWGRF 653



 Score = 53.6 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 7/83 (8%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
             D      +Y       K  ++ KA + F    +DFP +   R+  +  A   Y  G Y
Sbjct: 577 PHDENAALAMYYAGEEAYKRGDYQKAADKFQSIVQDFPESKYVREGSVSLARTLYKMGYY 636

Query: 111 QQAASLGE-------EYITQYPE 126
           QQAAS+ +        +  +YP+
Sbjct: 637 QQAASILDFVDKRWGRFYLEYPQ 659


>gi|204930030|ref|ZP_03221051.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|204321024|gb|EDZ06225.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
          Length = 262

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 45/126 (35%), Gaps = 9/126 (7%)

Query: 61  YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A+  +++++    A   F    + +P +     +      + Y+ GK   AA     
Sbjct: 145 YNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFAS 204

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       Y VG+        +  D+  T        +++ +Y  +   K A+
Sbjct: 205 VVKNYPKSPKAADAMYKVGV--------IMQDKGDTAKAKAVYQQVINKYPGTDGAKQAQ 256

Query: 180 FYVTVG 185
             +   
Sbjct: 257 KRLNAM 262



 Score = 51.3 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      +++Y +S Y   A +++              G
Sbjct: 141 ANTDYNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWL--------------G 186

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           +    +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 187 QLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVINKY 246

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 247 PGTDGAKQAQK 257



 Score = 49.0 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I +YP+S       Y +G       +              Y + +V+ Y 
Sbjct: 159 DDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 210

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A + V V                  +G+   A   +Q V+  Y   + A++A 
Sbjct: 211 KSPKAADAMYKVGVIMQ--------------DKGDTAKAKAVYQQVINKYPGTDGAKQAQ 256

Query: 231 ARL 233
            RL
Sbjct: 257 KRL 259


>gi|319779139|ref|YP_004130052.1| TPR repeat containing exported protein [Taylorella equigenitalis
           MCE9]
 gi|317109163|gb|ADU91909.1| TPR repeat containing exported protein [Taylorella equigenitalis
           MCE9]
          Length = 220

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 17/144 (11%), Positives = 55/144 (38%), Gaps = 8/144 (5%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
           + + D+   +      ++  Y+ A+   ++ N+  +       +  +P + +   +L   
Sbjct: 84  KGTGDITAPTQVGDPTEQNAYDTALDLFRQGNYQASATALANFTSAYPTSVLVPSALFYE 143

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
              +Y+   ++ + S     + QYP          ++  ++ ++     Y          
Sbjct: 144 GGSRYAIKDFKGSISTLNRMVEQYPNDPQAGDALLVIAGNHYELNNINEY--------KS 195

Query: 161 YMSRIVERYTNSPYVKGARFYVTV 184
            ++RI+++Y  +P    A+  + +
Sbjct: 196 TLNRIIKQYPGTPAADTAKERLNM 219



 Score = 53.6 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 53/141 (37%), Gaps = 22/141 (15%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
             ++   +A   +  G YQ +A+    + + YP S  V    +  G S   +        
Sbjct: 99  TEQNAYDTALDLFRQGNYQASATALANFTSAYPTSVLVPSALFYEGGSRYAI-------- 150

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           +  K  +  ++R+VE+Y N P    A   + +  N     E+          EY + + R
Sbjct: 151 KDFKGSISTLNRMVEQYPNDPQAGDAL--LVIAGNH---YELN------NINEYKSTLNR 199

Query: 213 FQLVLANYSDAEHAEEAMARL 233
              ++  Y     A+ A  RL
Sbjct: 200 ---IIKQYPGTPAADTAKERL 217



 Score = 39.3 bits (91), Expect = 0.50,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 39/120 (32%), Gaps = 15/120 (12%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
                D+   Q   +     ++     Y  S  V  A FY    R               
Sbjct: 104 YDTALDLFR-QGNYQASATALANFTSAYPTSVLVPSALFYEGGSR--------------Y 148

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
              ++  +I     ++  Y +   A +A+  +   +  L  ++E +  ++ I ++YP   
Sbjct: 149 AIKDFKGSISTLNRMVEQYPNDPQAGDALLVIAGNHYELNNINEYKSTLNRIIKQYPGTP 208


>gi|319943000|ref|ZP_08017283.1| hypothetical protein HMPREF0551_0129 [Lautropia mirabilis ATCC
           51599]
 gi|319743542|gb|EFV95946.1| hypothetical protein HMPREF0551_0129 [Lautropia mirabilis ATCC
           51599]
          Length = 273

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 53/132 (40%), Gaps = 8/132 (6%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
            + ++  +E A+   ++ NF  A + F + ++ +P +     +L      QY+ G Y  A
Sbjct: 150 EQAEKNEFEAALALFRKSNFKAADQAFAKFAKTYPESPYLPTALYWQGGAQYAQGNYNGA 209

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
            +  +  I ++P+S        L+G        +   D    K   Q   RI + + N+P
Sbjct: 210 VNTLQSLIQRFPDSARKADALLLIG--------NAQVDAGNDKAARQTFIRIGKEHPNTP 261

Query: 174 YVKGARFYVTVG 185
               AR  +   
Sbjct: 262 AANAARERLKAM 273



 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 45/141 (31%), Gaps = 22/141 (15%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           A K+   +A   +    ++ A     ++   YPES  +    Y  G           Y Q
Sbjct: 152 AEKNEFEAALALFRKSNFKAADQAFAKFAKTYPESPYLPTALYWQG--------GAQYAQ 203

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
                 +  +  +++R+ +S     A               + IG   +  G   AA   
Sbjct: 204 GNYNGAVNTLQSLIQRFPDSARKADAL--------------LLIGNAQVDAGNDKAARQT 249

Query: 213 FQLVLANYSDAEHAEEAMARL 233
           F  +   + +   A  A  RL
Sbjct: 250 FIRIGKEHPNTPAANAARERL 270



 Score = 51.3 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 41/119 (34%), Gaps = 14/119 (11%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K   Q  ++  + Y  SPY+  A ++    +                +G Y  A+  
Sbjct: 167 SNFKAADQAFAKFAKTYPESPYLPTALYWQGGAQ--------------YAQGNYNGAVNT 212

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
            Q ++  + D+    +A+  +  A V       AR+    I + +P    A      +K
Sbjct: 213 LQSLIQRFPDSARKADALLLIGNAQVDAGNDKAARQTFIRIGKEHPNTPAANAARERLK 271



 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 29/80 (36%), Gaps = 2/80 (2%)

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
             E E      ++  + AA   F      Y ++ +   A+     A  A    + A   +
Sbjct: 154 KNEFEAALALFRKSNFKAADQAFAKFAKTYPESPYLPTALYWQGGAQYAQGNYNGAVNTL 213

Query: 251 SLIQERYPQGYWARYVETLV 270
             + +R+P    AR  + L+
Sbjct: 214 QSLIQRFPDS--ARKADALL 231



 Score = 40.5 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 26/83 (31%), Gaps = 6/83 (7%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                    +Y +      + N++ A        + FP +     +LL+    Q  AG  
Sbjct: 184 PESPYLPTALYWQGGAQYAQGNYNGAVNTLQSLIQRFPDSARKADALLLIGNAQVDAGND 243

Query: 111 QQAASLGEEYITQ---YPESKNV 130
           + A      +I     +P +   
Sbjct: 244 KAARQT---FIRIGKEHPNTPAA 263


>gi|33594230|ref|NP_881874.1| putative periplasmic protein [Bordetella pertussis Tohama I]
 gi|33598304|ref|NP_885947.1| putative periplasmic protein [Bordetella parapertussis 12822]
 gi|33603214|ref|NP_890774.1| putative periplasmic protein [Bordetella bronchiseptica RB50]
 gi|33564305|emb|CAE43606.1| putative periplasmic protein [Bordetella pertussis Tohama I]
 gi|33566862|emb|CAE39077.1| putative periplasmic protein [Bordetella parapertussis]
 gi|33568845|emb|CAE34603.1| putative periplasmic protein [Bordetella bronchiseptica RB50]
 gi|332383644|gb|AEE68491.1| putative periplasmic protein [Bordetella pertussis CS]
          Length = 229

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/132 (12%), Positives = 44/132 (33%), Gaps = 8/132 (6%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           + ++  Y+ A+   ++  +  A E        +P + +A  +       +Y+   ++ A 
Sbjct: 106 QQEQAAYDGAIDLFRKGQYKDAAESLAAFIALYPNSQLAPTAQFYLGSSRYAMKDFKGAI 165

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
                 +   P +        ++  S  ++                 + RIV  Y  +P 
Sbjct: 166 EQLNNLVQNAPTNARAPDALLVIAGSQIELNNRAG--------AKATLQRIVRDYPTTPA 217

Query: 175 VKGARFYVTVGR 186
              A+  + + +
Sbjct: 218 ANTAKSRLQLLQ 229



 Score = 43.2 bits (101), Expect = 0.040,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 41/116 (35%), Gaps = 14/116 (12%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           K   + ++  +  Y NS     A+FY+   R                  ++  AI +   
Sbjct: 125 KDAAESLAAFIALYPNSQLAPTAQFYLGSSR--------------YAMKDFKGAIEQLNN 170

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           ++ N      A +A+  +  + + L     A+  +  I   YP    A   ++ ++
Sbjct: 171 LVQNAPTNARAPDALLVIAGSQIELNNRAGAKATLQRIVRDYPTTPAANTAKSRLQ 226


>gi|306991541|pdb|2XEV|A Chain A, Crystal Structure Of The Tpr Domain Of Xanthomonas
           Campestris Ybgf
 gi|306991542|pdb|2XEV|B Chain B, Crystal Structure Of The Tpr Domain Of Xanthomonas
           Campestris Ybgf
 gi|306991543|pdb|2XEV|C Chain C, Crystal Structure Of The Tpr Domain Of Xanthomonas
           Campestris Ybgf
          Length = 129

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 43/130 (33%), Gaps = 8/130 (6%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
            R  Y  A   LK   +  A + F      +P       +L       Y+   +Q A + 
Sbjct: 2   ARTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQ 61

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
             + +++YP           +G+S     ++            Q + ++  +Y  S   +
Sbjct: 62  FRDLVSRYPTHDKAAGGLLKLGLSQYGEGKNT--------EAQQTLQQVATQYPGSDAAR 113

Query: 177 GARFYVTVGR 186
            A+  +   R
Sbjct: 114 VAQERLQSIR 123



 Score = 44.0 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 41/115 (35%), Gaps = 14/115 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              Q     +E Y N  Y   A +++              G  Y     +  A  +F+ +
Sbjct: 20  DASQLFLSFLELYPNGVYTPNALYWL--------------GESYYATRNFQLAEAQFRDL 65

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           ++ Y   + A   + +L  +        EA++ +  +  +YP    AR  +  ++
Sbjct: 66  VSRYPTHDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERLQ 120



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 27/80 (33%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
              V     +Y     +   +NF  A   F      +P    A   LL     QY  GK 
Sbjct: 33  PNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYGEGKN 92

Query: 111 QQAASLGEEYITQYPESKNV 130
            +A    ++  TQYP S   
Sbjct: 93  TEAQQTLQQVATQYPGSDAA 112



 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 26/70 (37%)

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           +A     +    LK G+Y  A   F   L  Y +  +   A+  L E+Y A      A  
Sbjct: 1   MARTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEA 60

Query: 249 VVSLIQERYP 258
               +  RYP
Sbjct: 61  QFRDLVSRYP 70


>gi|253687645|ref|YP_003016835.1| tol-pal system protein YbgF [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251754223|gb|ACT12299.1| tol-pal system protein YbgF [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 258

 Score = 61.3 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 46/135 (34%), Gaps = 9/135 (6%)

Query: 50  SVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           +          Y  AV   L+++ + +A   F    + +P +     +      + Y+ G
Sbjct: 130 APASTGDANTDYNAAVALVLEKKQYDQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKG 189

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           K   AA      +  YP+S         VG+        +  ++           ++V+ 
Sbjct: 190 KKDDAAYYFANVVKNYPKSPKSSEALLKVGV--------IMQEKGQADKAKAVYQQVVKM 241

Query: 169 YTNSPYVKGARFYVT 183
           Y N+   K A+  + 
Sbjct: 242 YPNTESAKQAQKRLA 256



 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 42/112 (37%), Gaps = 14/112 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             +      V++Y +S Y   A +++              G+    +G+   A   F  V
Sbjct: 156 QAISAFQAFVKKYPDSTYQPNANYWL--------------GQLNYNKGKKDDAAYYFANV 201

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           + NY  +  + EA+ ++          D+A+ V   + + YP    A+  + 
Sbjct: 202 VKNYPKSPKSSEALLKVGVIMQEKGQADKAKAVYQQVVKMYPNTESAKQAQK 253



 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 46/127 (36%), Gaps = 22/127 (17%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +Y QA S  + ++ +YP+S       Y +G       +              Y + +V+
Sbjct: 152 KQYDQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYFANVVK 203

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y  SP    A   V V                 ++G+   A   +Q V+  Y + E A+
Sbjct: 204 NYPKSPKSSEALLKVGVIMQ--------------EKGQADKAKAVYQQVVKMYPNTESAK 249

Query: 228 EAMARLV 234
           +A  RL 
Sbjct: 250 QAQKRLA 256



 Score = 43.6 bits (102), Expect = 0.029,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 2/71 (2%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           L++ +Y  AI  FQ  +  Y D+ +   A   L +        D+A    + + + YP+ 
Sbjct: 149 LEKKQYDQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFANVVKNYPKS 208

Query: 261 YWARYVETLVK 271
              +  E L+K
Sbjct: 209 --PKSSEALLK 217


>gi|213962073|ref|ZP_03390338.1| TPR-domain containing protein [Capnocytophaga sputigena Capno]
 gi|213955426|gb|EEB66743.1| TPR-domain containing protein [Capnocytophaga sputigena Capno]
          Length = 1001

 Score = 61.3 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 69/215 (32%), Gaps = 25/215 (11%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYS 106
             +     Y +  Y  A     + N++ A   F +  +  P        ++L  A   + 
Sbjct: 490 PAAAKTEEYSKGYYGLAYSQFNQHNYATAIVNFEKYLKQNPKDNVWKHDAMLRLADSYFV 549

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
            GKY  A     + I +  +S + DY  Y   +SY  + R            ++ + R V
Sbjct: 550 TGKYWPAMEGYNKLIEE--KSADQDYAAYQKAISYGFVDRLPSK--------IEDLERFV 599

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
           + Y  S     A                E+   Y+ +G     +  +Q ++  Y      
Sbjct: 600 KNYKGSNLRPNAL--------------FELANAYVTKGSTEKGVQYYQQLIKEYKGNVLV 645

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             AM R    Y       +A  +   I + YP   
Sbjct: 646 PRAMLREGLVYYNKGEDQKALTLFKTIAKDYPNTN 680



 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 30/101 (29%), Gaps = 14/101 (13%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              +  ++ + +A  Y  +          +        +  Y    Y+ A    E++   
Sbjct: 252 GESYFNQKKYKEAIPYLQKYKGKK--GKFSNTDYYYLGYAFYKNNDYKAAI---EQFNKI 306

Query: 124 YPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
              + NV    YY +   Y +       DQ+  +  L    
Sbjct: 307 VGGNDNVAQNAYYHLAECYLK------TDQK--QQALNAFR 339



 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 84/230 (36%), Gaps = 48/230 (20%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
              ++E A  ++ + +  K  +Y+ Q  +++    +  +++L    V Y+ G+ Q+A +L
Sbjct: 609 PNALFELANAYVTKGSTEKGVQYYQQLIKEYKGNVLVPRAMLREGLVYYNKGEDQKALTL 668

Query: 117 GEEYITQYPE---------------------SKNVDYV----------YYLVGMSYAQMI 145
            +     YP                      S+   +             L G SY    
Sbjct: 669 FKTIAKDYPNTNEASQAVASAKLIYVDMGKVSEYAAWAKSLGYVEVTDLELEGASYEAAE 728

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
           R     Q  +K  +    + ++ + N      A              E  +G+ Y   G+
Sbjct: 729 RQYL--QNNSKEAIAAFEKYLKDFPNGLRRTNA--------------EFYLGQLYFNSGQ 772

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
              A+  ++ V  + S+ E+ E+A+ R+ +  +      +A+  +  +++
Sbjct: 773 KAKALTHYENVSKSGSN-EYGEQALTRVCQILLDAGSYLKAKPYLEELEK 821



 Score = 36.6 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 82/248 (33%), Gaps = 53/248 (21%)

Query: 52  TDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCS---------RDFPFAG---------- 91
            +     E Y + A L+ ++ N+++A E++N              F F            
Sbjct: 97  PESPMSSEAYLQMANLYFQQGNYAEALEWYNAIDELGVSSEEKARFNFQKGYCLFHTGKQ 156

Query: 92  ---------------VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY---- 132
                           A  +     ++ Y +  Y +A S   E       SKNV Y    
Sbjct: 157 AESKPYFESVQNNPLYADNAKYYLGYIAYDSDDYAKAESYFREVQDDATLSKNVSYFQAN 216

Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLM--LQYMSRIV-ERYTNSPYVKGARFYVTVGRNQL 189
           +Y+   + Y + I +       TK    +  +++I+ E Y N    K A  Y+   + + 
Sbjct: 217 MYFKQAL-YDEAIEEGQKQLAKTKSAQEISELNKIIGESYFNQKKYKEAIPYLQKYKGK- 274

Query: 190 AAKEVEIGRYY------LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
              +     YY       K  +Y AAI +F  ++    +      A   L E Y+     
Sbjct: 275 -KGKFSNTDYYYLGYAFYKNNDYKAAIEQFNKIVGGNDNVAQN--AYYHLAECYLKTDQK 331

Query: 244 DEAREVVS 251
            +A     
Sbjct: 332 QQALNAFR 339



 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 68/207 (32%), Gaps = 24/207 (11%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
            VTD+  +   YE A     + N  +A   F +  +DFP       +      + +++G+
Sbjct: 713 EVTDLELEGASYEAAERQYLQNNSKEAIAAFEKYLKDFPNGLRRTNAEFYLGQLYFNSGQ 772

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
             +A +  E  +++   ++  +             +  +  D  +      Y+  + +  
Sbjct: 773 KAKALTHYEN-VSKSGSNEYGEQAL--------TRVCQILLDAGSYLKAKPYLEELEKT- 822

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS-DAEHAEE 228
                   A+       N +        R       Y  AI     VL   S D     +
Sbjct: 823 -----ATIAQNRTYAQSNLM--------RVCYNEKLYDKAIEYANKVLEEKSIDTRIKND 869

Query: 229 AMARLVEAYVALALMDEAREVVSLIQE 255
           A   L  AY      D+AR+    +Q+
Sbjct: 870 AYIVLARAYTQAGNDDQARKYYQEVQK 896


>gi|293603402|ref|ZP_06685829.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
 gi|292818175|gb|EFF77229.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
          Length = 228

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/151 (11%), Positives = 45/151 (29%), Gaps = 8/151 (5%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
                  S      +      ++  Y+ A+   ++  +  A E     +  +P + +A  
Sbjct: 86  SAKPGAPSGTNPPGTAAGDPQEQAAYDGAMDLFRKGQYKDAAESLAAFTALYPNSQLAPS 145

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +       +Y    ++ A       + + P++        ++       I          
Sbjct: 146 AQFYLGSSRYGMKDFKGAIEQLTAMVQKSPDNARAPDALLIIA---GGQIELNNR----- 197

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
                 + RIV  Y N+     A+  + + +
Sbjct: 198 AGAKATLQRIVRDYPNAQAASTAKSRLQLLQ 228



 Score = 42.0 bits (98), Expect = 0.079,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 39/116 (33%), Gaps = 14/116 (12%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           K   + ++     Y NS     A+FY+   R                  ++  AI +   
Sbjct: 124 KDAAESLAAFTALYPNSQLAPSAQFYLGSSR--------------YGMKDFKGAIEQLTA 169

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           ++    D   A +A+  +    + L     A+  +  I   YP    A   ++ ++
Sbjct: 170 MVQKSPDNARAPDALLIIAGGQIELNNRAGAKATLQRIVRDYPNAQAASTAKSRLQ 225


>gi|315638115|ref|ZP_07893298.1| competence lipoprotein ComL [Campylobacter upsaliensis JV21]
 gi|315481795|gb|EFU72416.1| competence lipoprotein ComL [Campylobacter upsaliensis JV21]
          Length = 215

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 69/177 (38%), Gaps = 15/177 (8%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            +  S+ + F      ++  ++Y  S +        Y + +  L++++  KA  +++  +
Sbjct: 5   LLILSLIITFFTACSTKNKDELYNLSPSQW------YAQIIKDLQDKDLEKADTHYSGMA 58

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
            +     +   +L++ A       +YQ A    +EY  ++  SKNVDY  YL   +  + 
Sbjct: 59  SEHIADPLLEPTLIILAQAHMDEEEYQLAEFYLDEYNKKFGNSKNVDYTRYLKIKAKFEA 118

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
                 +Q       Q +   ++ Y N+ Y    +  +T            I  +YL
Sbjct: 119 FAVPNRNQALMLQSQQEIDNFLKEYPNTQYKPLVQTMLTK---------FNIAVFYL 166


>gi|291278704|ref|YP_003495539.1| hypothetical protein DEFDS_0275 [Deferribacter desulfuricans SSM1]
 gi|290753406|dbj|BAI79783.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
          Length = 257

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 49/141 (34%), Gaps = 25/141 (17%)

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           A+  Y  GKY ++ +   E++ +YP     D   Y +G  Y      +          + 
Sbjct: 139 AYELYMKGKYFESLNKFNEFLKKYPNDDLSDNAMYWIGEIYYSQKDYI--------KCID 190

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
            M  ++++Y     V  A   +                 Y++ G+   A+   + +L NY
Sbjct: 191 TMKDLIKKYPQGNKVPDAYLKMAYA--------------YIEIGDQDNAVKYLKYLLDNY 236

Query: 221 SDAEHAEEA---MARLVEAYV 238
                A  A   +  L  +Y 
Sbjct: 237 PATRAASLAKQKLDELGVSYE 257



 Score = 59.4 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 20/133 (15%), Positives = 52/133 (39%), Gaps = 8/133 (6%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D   +  +Y  A     +  + ++   FN+  + +P   ++  ++     + YS   Y +
Sbjct: 128 DSADKTTIYSYAYELYMKGKYFESLNKFNEFLKKYPNDDLSDNAMYWIGEIYYSQKDYIK 187

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
                ++ I +YP+   V   Y  +  +Y ++      DQ      ++Y+  +++ Y  +
Sbjct: 188 CIDTMKDLIKKYPQGNKVPDAYLKMAYAYIEIG-----DQDN---AVKYLKYLLDNYPAT 239

Query: 173 PYVKGARFYVTVG 185
                A+  +   
Sbjct: 240 RAASLAKQKLDEL 252



 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 43/129 (33%), Gaps = 31/129 (24%)

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
            Y  Y+ G                    L   +  +++Y N               + L+
Sbjct: 139 AYELYMKG---------------KYFESLNKFNEFLKKYPN---------------DDLS 168

Query: 191 AKEVE-IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
              +  IG  Y  + +Y+  I   + ++  Y       +A  ++  AY+ +   D A + 
Sbjct: 169 DNAMYWIGEIYYSQKDYIKCIDTMKDLIKKYPQGNKVPDAYLKMAYAYIEIGDQDNAVKY 228

Query: 250 VSLIQERYP 258
           +  + + YP
Sbjct: 229 LKYLLDNYP 237



 Score = 43.6 bits (102), Expect = 0.028,   Method: Composition-based stats.
 Identities = 10/87 (11%), Positives = 27/87 (31%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
            +       D      +Y    ++  ++++ K  +      + +P       + L  A+ 
Sbjct: 156 NEFLKKYPNDDLSDNAMYWIGEIYYSQKDYIKCIDTMKDLIKKYPQGNKVPDAYLKMAYA 215

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNV 130
               G    A    +  +  YP ++  
Sbjct: 216 YIEIGDQDNAVKYLKYLLDNYPATRAA 242



 Score = 36.2 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 1/68 (1%)

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           Y+K G+Y  ++ +F   L  Y + + ++ AM  + E Y +     +  + +  + ++YPQ
Sbjct: 143 YMK-GKYFESLNKFNEFLKKYPNDDLSDNAMYWIGEIYYSQKDYIKCIDTMKDLIKKYPQ 201

Query: 260 GYWARYVE 267
           G       
Sbjct: 202 GNKVPDAY 209


>gi|319762345|ref|YP_004126282.1| tol-pal system protein ybgf [Alicycliphilus denitrificans BC]
 gi|330825734|ref|YP_004389037.1| tol-pal system protein YbgF [Alicycliphilus denitrificans K601]
 gi|317116906|gb|ADU99394.1| tol-pal system protein YbgF [Alicycliphilus denitrificans BC]
 gi|329311106|gb|AEB85521.1| tol-pal system protein YbgF [Alicycliphilus denitrificans K601]
          Length = 262

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 47/132 (35%), Gaps = 8/132 (6%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
             ++  +E A+   +   F +A   F    R +P +G    +       QY+   Y++A 
Sbjct: 139 PAEKRDFEAALAVFRSGKFPEAATAFGNFVRQYPQSGYVPSARFWLGNAQYATRDYKEAI 198

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
           +  +  +   P+            +S    I +   + + T+   + +  ++  Y  S  
Sbjct: 199 ANFKGLLAAAPDHARAPEA----ALS----IANCQIELKDTRAARKTLEDLLRAYPQSEA 250

Query: 175 VKGARFYVTVGR 186
              A+  +   +
Sbjct: 251 AAAAKERLARLK 262



 Score = 45.5 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 49/143 (34%), Gaps = 22/143 (15%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           A K    +A   + +GK+ +AA+    ++ QYP+S  V    + +G +            
Sbjct: 140 AEKRDFEAALAVFRSGKFPEAATAFGNFVRQYPQSGYVPSARFWLGNAQYAT-------- 191

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           R  K  +     ++    +      A   +   + +L               +  AA   
Sbjct: 192 RDYKEAIANFKGLLAAAPDHARAPEAALSIANCQIEL--------------KDTRAARKT 237

Query: 213 FQLVLANYSDAEHAEEAMARLVE 235
            + +L  Y  +E A  A  RL  
Sbjct: 238 LEDLLRAYPQSEAAAAAKERLAR 260



 Score = 43.2 bits (101), Expect = 0.035,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 36/105 (34%), Gaps = 14/105 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                    V +Y  S YV  ARF++   +                  +Y  AI  F+ +
Sbjct: 159 EAATAFGNFVRQYPQSGYVPSARFWLGNAQ--------------YATRDYKEAIANFKGL 204

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           LA   D   A EA   +    + L     AR+ +  +   YPQ  
Sbjct: 205 LAAAPDHARAPEAALSIANCQIELKDTRAARKTLEDLLRAYPQSE 249


>gi|300770842|ref|ZP_07080719.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33861]
 gi|300762115|gb|EFK58934.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33861]
          Length = 1040

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 63/210 (30%), Gaps = 31/210 (14%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++++ ++   + N S          + +P +  A        +  ++ G+Y  A S  + 
Sbjct: 620 LFQRGIIQGLQGNSSGKIATLQSVVQKYPKSNYADDVAFEIPYTYFTLGQYDHAISGLQS 679

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            + +YP S  V      +G+       +           L+   R+V++Y+ +   K A 
Sbjct: 680 MVEKYPRSSYVPRALVTIGLVQYNQDNN--------DAALKTFQRVVDQYSTTDEAKQAM 731

Query: 180 FYVTVGR------------------NQLAAKE-----VEIGRYYLKRGEYVAAIPRFQLV 216
             +                        L+  E              RG Y  A+      
Sbjct: 732 RSIENIYLDKGDATGYIRYATGTNIGDLSTSEQDSRAFSTATTLFSRGNYQGAVEAVNAY 791

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEA 246
              +      + A     E+  AL    EA
Sbjct: 792 FDKFPKPIQEKYARFIRAESNAALGKNQEA 821



 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 64/201 (31%), Gaps = 42/201 (20%)

Query: 68  LKEQNFSKAYEYFN-----------QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
            + +N++ +  YF            + +           ++   A   +S   Y +A + 
Sbjct: 552 FRNENYNTSANYFERFLSMGGKEGIELNTR-------NDAIARLADSYFSLKNYGRAMTE 604

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            ++ I    ++++ DY  +  G+                   +  +  +V++Y  S Y  
Sbjct: 605 YDKLI--NSKAQSQDYALFQRGIIQGLQGNSSGK--------IATLQSVVQKYPKSNYAD 654

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
              F +                 Y   G+Y  AI   Q ++  Y  + +   A+  +   
Sbjct: 655 DVAFEIPYT--------------YFTLGQYDHAISGLQSMVEKYPRSSYVPRALVTIGLV 700

Query: 237 YVALALMDEAREVVSLIQERY 257
                  D A +    + ++Y
Sbjct: 701 QYNQDNNDAALKTFQRVVDQY 721



 Score = 35.5 bits (81), Expect = 7.6,   Method: Composition-based stats.
 Identities = 8/65 (12%), Positives = 22/65 (33%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D       +   ++    +  ++++ KA E+F +            +     A+ ++   
Sbjct: 132 DYPASPNSKAAYFQIGRSYYAKKDYKKAIEWFTKIDGKNLAGAENTEYRFKLAYSRFMTE 191

Query: 109 KYQQA 113
            Y  A
Sbjct: 192 DYTSA 196


>gi|124006636|ref|ZP_01691468.1| tetratricopeptide repeat family [Microscilla marina ATCC 23134]
 gi|123987791|gb|EAY27482.1| tetratricopeptide repeat family [Microscilla marina ATCC 23134]
          Length = 1020

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 67/206 (32%), Gaps = 40/206 (19%)

Query: 61  YEKAVLFLKEQNFSKAYEYFN-----------QCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           Y     +   + + KA  YF                  P++     ++   A   Y   K
Sbjct: 527 YGLGYAYYNLREYDKALPYFQQCVTSWQLRTAAEEETTPYSD----AVTRLADCFYVQKK 582

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y  A  L +E I    +    DY YY  G+        +   Q    L  Q    +V+ +
Sbjct: 583 YANALHLYDELIAG--KHPEQDYAYYQQGV--------IKVAQGDYDLAKQKFEDVVQNF 632

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
            NS Y   A +   +                L+ G Y  AI  F  ++     +     A
Sbjct: 633 PNSRYYDQALYEKALID--------------LENGHYSVAIAGFSTLMKERPHSLLRPNA 678

Query: 230 MARLVEAYVALALMDEA-REVVSLIQ 254
           + +   +Y      +EA ++  ++++
Sbjct: 679 LLKRALSYQNFDNTNEAIKDYKAILK 704



 Score = 59.4 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 72/211 (34%), Gaps = 23/211 (10%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
            +Q   DV  +      Y + +YEKA++ L+  ++S A   F+   ++ P + +   +LL
Sbjct: 621 AKQKFEDVVQNFPNSRYYDQALYEKALIDLENGHYSVAIAGFSTLMKERPHSLLRPNALL 680

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
             A    +     +A    +  +  +P             +S   ++         T  +
Sbjct: 681 KRALSYQNFDNTNEAIKDYKAILKDHPTHSTAPSAL----LSLQDLLTQAGR----TDEL 732

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
            + +    +   NS             RN  A +           G+Y  AI  F+  ++
Sbjct: 733 NEILRNYKKVNPNSK-----ALLTIDLRN--AEQAFF-------DGKYSEAIILFKAYIS 778

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREV 249
            Y +      A   L EAY+     + A   
Sbjct: 779 KYPEGGS-PNAKYYLGEAYLNSGDNENALRY 808



 Score = 39.7 bits (92), Expect = 0.48,   Method: Composition-based stats.
 Identities = 16/128 (12%), Positives = 43/128 (33%), Gaps = 3/128 (2%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K      +   +   +      S  VY       ++    +++      ++N+  A +
Sbjct: 1   MQKLIRYSLYLKTLYLFIFCVVTLSSTVYAQHTHVFKHPDRYFKRGKALFAKKNYVAAKQ 60

Query: 79  YFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL--GEEYITQYPESKNVDYVYY 135
            F     ++          +    +V Y A   +Q+ +    ++++  +P    V   +Y
Sbjct: 61  QFEDFLQKNKEETKHQENLIEARFYVAYLALILEQSNATKLYQKFVRTHPTHPKVAQAHY 120

Query: 136 LVGMSYAQ 143
             G  Y +
Sbjct: 121 AWGNYYYE 128


>gi|163854961|ref|YP_001629259.1| putative periplasmic protein [Bordetella petrii DSM 12804]
 gi|163258689|emb|CAP40988.1| putative periplasmic protein [Bordetella petrii]
          Length = 225

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/148 (12%), Positives = 54/148 (36%), Gaps = 8/148 (5%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
             Q   +    +      ++  Y+ A+   ++  + +A E        +P + +A  +  
Sbjct: 86  PGQGGANNPPGATAADPREQAAYDGAIDQFRKGQYKEAAESLAAFVALYPNSQLAPTAKF 145

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
                +Y+A  Y+ A     + + + P++        ++  S  ++              
Sbjct: 146 YLGSSRYAAKDYKGAIEQLNQLVQESPDNARAPDALLVIAGSQIELNNRAG--------A 197

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGR 186
              + RIV+ Y ++P  + A+  + + +
Sbjct: 198 KASLQRIVKDYPSTPAAETAKSRLQLLQ 225



 Score = 42.4 bits (99), Expect = 0.071,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 42/116 (36%), Gaps = 14/116 (12%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           K   + ++  V  Y NS     A+FY+   R                  +Y  AI +   
Sbjct: 121 KEAAESLAAFVALYPNSQLAPTAKFYLGSSR--------------YAAKDYKGAIEQLNQ 166

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           ++    D   A +A+  +  + + L     A+  +  I + YP    A   ++ ++
Sbjct: 167 LVQESPDNARAPDALLVIAGSQIELNNRAGAKASLQRIVKDYPSTPAAETAKSRLQ 222


>gi|156934763|ref|YP_001438678.1| tol-pal system protein YbgF [Cronobacter sakazakii ATCC BAA-894]
 gi|156533017|gb|ABU77843.1| hypothetical protein ESA_02603 [Cronobacter sakazakii ATCC BAA-894]
          Length = 265

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 47/126 (37%), Gaps = 9/126 (7%)

Query: 61  YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A+  +++++   +A   F+   + +P +     +      + Y+ GK   AA     
Sbjct: 148 YNAAIALVQDKSRQDEAITAFSNFIKQYPDSTYQPNAHYWLGQLNYNKGKKDDAAYYFAS 207

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       Y VG+        +  D+  T        +++ +Y  +   K A+
Sbjct: 208 VVKNYPKSPKAADAMYKVGV--------IMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQ 259

Query: 180 FYVTVG 185
             +   
Sbjct: 260 KRLNAM 265



 Score = 50.1 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 44/123 (35%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
            +A +    +I QYP+S      +Y +G       +              Y + +V+ Y 
Sbjct: 162 DEAITAFSNFIKQYPDSTYQPNAHYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 213

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A + V V                  +G+   A   +Q V++ Y   + A++A 
Sbjct: 214 KSPKAADAMYKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 259

Query: 231 ARL 233
            RL
Sbjct: 260 KRL 262



 Score = 49.3 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 44/131 (33%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +   S  +++Y +S Y   A +++               
Sbjct: 144 ANTDYNAAIALVQDKSRQDEAITAFSNFIKQYPDSTYQPNAHYWLGQLN----------- 192

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
                +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 193 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVISKY 249

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 250 PGTDGAKQAQK 260


>gi|193212310|ref|YP_001998263.1| tol-pal system protein YbgF [Chlorobaculum parvum NCIB 8327]
 gi|193085787|gb|ACF11063.1| tol-pal system protein YbgF [Chlorobaculum parvum NCIB 8327]
          Length = 263

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 51/139 (36%), Gaps = 8/139 (5%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
           V   S ++      +  + +L +++++++ A E F +     P +     +    A   Y
Sbjct: 132 VSKPSASEASMSENLLSEGLLLMEKKDYNSARERFKEFMSKNPNSPKVSDAQFYLAESYY 191

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               Y++A    +  I +Y +S       Y  G++  + I D                 +
Sbjct: 192 EEQWYEKAILEYQVVIAKYTKSAKRPAALYKQGLA-FEQIGD-------KANAKARYRDV 243

Query: 166 VERYTNSPYVKGARFYVTV 184
           V  Y+ +P  + A+  +  
Sbjct: 244 VNLYSKTPEARLAKKKMDA 262



 Score = 38.9 bits (90), Expect = 0.72,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 32/90 (35%), Gaps = 14/90 (15%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
             +     + +  NSP V  A+                +   Y +   Y  AI  +Q+V+
Sbjct: 162 ARERFKEFMSKNPNSPKVSDAQ--------------FYLAESYYEEQWYEKAILEYQVVI 207

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAR 247
           A Y+ +     A+ +   A+  +     A+
Sbjct: 208 AKYTKSAKRPAALYKQGLAFEQIGDKANAK 237



 Score = 38.6 bits (89), Expect = 0.86,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 28/60 (46%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           +++ +Y +A  RF+  ++   ++    +A   L E+Y      ++A     ++  +Y + 
Sbjct: 154 MEKKDYNSARERFKEFMSKNPNSPKVSDAQFYLAESYYEEQWYEKAILEYQVVIAKYTKS 213


>gi|89900878|ref|YP_523349.1| hypothetical protein Rfer_2094 [Rhodoferax ferrireducens T118]
 gi|89345615|gb|ABD69818.1| Tetratricopeptide TPR_2 [Rhodoferax ferrireducens T118]
          Length = 259

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/137 (15%), Positives = 49/137 (35%), Gaps = 8/137 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
             T    ++  +E A+   ++ +FS A   F +  + +P  G    +L      QY+   
Sbjct: 131 EFTAEPAEKRDFEAALAVFRKGDFSAAQSVFLEFLKRYPATGYGPSALFWLGNAQYATRD 190

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y++A       I + PE          +     ++        + T+   + +  +++ Y
Sbjct: 191 YKEAMINFRSLIAREPEHVRAPEAVLSIANCQIEL--------KDTRGARKTLEDLIKAY 242

Query: 170 TNSPYVKGARFYVTVGR 186
             S     A+  +   +
Sbjct: 243 PQSEAAIAAKERLPRLK 259



 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 38/105 (36%), Gaps = 14/105 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                    ++RY  + Y   A F++   +             Y  R  Y  A+  F+ +
Sbjct: 156 AAQSVFLEFLKRYPATGYGPSALFWLGNAQ-------------YATRD-YKEAMINFRSL 201

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +A   +   A EA+  +    + L     AR+ +  + + YPQ  
Sbjct: 202 IAREPEHVRAPEAVLSIANCQIELKDTRGARKTLEDLIKAYPQSE 246



 Score = 35.1 bits (80), Expect = 9.9,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 45/124 (36%), Gaps = 4/124 (3%)

Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           L G+   Q++RDV   QR  K   Q ++  + ++  +      R            ++ E
Sbjct: 88  LRGL-NEQLVRDVAELQRQQKDTAQGVNDRLRQFEPTKVTVDGRE---FTAEPAEKRDFE 143

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
                 ++G++ AA   F   L  Y    +   A+  L  A  A     EA      +  
Sbjct: 144 AALAVFRKGDFSAAQSVFLEFLKRYPATGYGPSALFWLGNAQYATRDYKEAMINFRSLIA 203

Query: 256 RYPQ 259
           R P+
Sbjct: 204 REPE 207


>gi|227356661|ref|ZP_03841047.1| YbgF protein [Proteus mirabilis ATCC 29906]
 gi|227163169|gb|EEI48100.1| YbgF protein [Proteus mirabilis ATCC 29906]
          Length = 247

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 48/126 (38%), Gaps = 9/126 (7%)

Query: 61  YEKAVL-FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A+   L  +++ KA    N   + +P +     +      + Y  G   QAAS    
Sbjct: 130 YNAAIDIVLNSKDYDKAIVALNNFIKSYPKSSYQSNAQFWLGQMYYLKGNKDQAASTFAI 189

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S+     +Y +G+        +  ++           ++V++Y NS   K A+
Sbjct: 190 VVKNYPKSQKASEAFYKIGL--------IMQEKGQKDNAKAIYQQVVKQYPNSAGAKLAQ 241

Query: 180 FYVTVG 185
             +   
Sbjct: 242 KQLAAL 247



 Score = 51.7 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 50/129 (38%), Gaps = 14/129 (10%)

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           +      D+  + +     +  ++  ++ Y  S Y   A+F++                Y
Sbjct: 128 ADYNAAIDIVLNSKDYDKAIVALNNFIKSYPKSSYQSNAQFWLGQM-------------Y 174

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           YLK  +  AA   F +V+ NY  ++ A EA  ++          D A+ +   + ++YP 
Sbjct: 175 YLKGNKDQAAST-FAIVVKNYPKSQKASEAFYKIGLIMQEKGQKDNAKAIYQQVVKQYPN 233

Query: 260 GYWARYVET 268
              A+  + 
Sbjct: 234 SAGAKLAQK 242


>gi|313673764|ref|YP_004051875.1| tetratricopeptide tpr_1 repeat-containing protein [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312940520|gb|ADR19712.1| Tetratricopeptide TPR_1 repeat-containing protein [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 863

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 60/158 (37%), Gaps = 18/158 (11%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           +    Y+   +L ++ I + P  K  +   ++ G+SY ++ ++     +A          
Sbjct: 149 FKDKDYEAVITLADKLIEKNPLDKYGEEALFIQGLSYLELGKESD---KALFSAASTFDE 205

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
            + ++  S  +  A       + +L            K      AI  +Q ++ N  D +
Sbjct: 206 FIRKFPRSKLLPEAMLKSAETKEKLG----------FKNE----AIFVYQEMIKNVKDEK 251

Query: 225 HAEEAMARLVEAYVALALMDEAREVVS-LIQERYPQGY 261
           +   A  ++ E +  L   D+A +  +  +Q+  P+  
Sbjct: 252 YLNIAYTKIGELFSELGQPDKALKYFTDYLQKTKPENS 289



 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 65/198 (32%), Gaps = 40/198 (20%)

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS---------YAQMIRDVPYD 151
           A+  Y  G+ +++A L +  I     +   ++V Y++ ++              + +  D
Sbjct: 654 AYALYMVGEKEKSAQLIKS-IKL--VNDETEFVRYMLNITPNRFNINNYNEDQFQKIISD 710

Query: 152 QRATK--LMLQYMSRIVERYTNSPYVK-------GARFYVTVGRNQL---------AAKE 193
            R T      Q                        +   +    N L           K 
Sbjct: 711 LRKTNSLKAYQLSLDYSRNKPLGIKSAIDILENMDSADKMVNLDNFLKIIEKQPDNIKKS 770

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANY--------SDAEHAEEAMARLVEAYVALALMDE 245
               R Y K  E V     +Q  + NY         D  +  EA+  L ++Y+A    D 
Sbjct: 771 AY--RLYFKSAENVFISKNYQNAIKNYLNYIKYAPKDDPNHPEALYFLGKSYIATGDNDL 828

Query: 246 AREVVSLIQERYPQGYWA 263
           A + ++ + +R+P   +A
Sbjct: 829 ALKYLTDLTKRFPNNQYA 846



 Score = 42.8 bits (100), Expect = 0.048,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 79/269 (29%), Gaps = 58/269 (21%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
             D         ++  +     K++++       ++     P      ++L +       
Sbjct: 128 VEDQTYKNEESEKLLTQLKNKFKDKDYEAVITLADKLIEKNPLDKYGEEALFIQGLSYLE 187

Query: 107 AGK-----YQQAASLGEEYITQYPESKNVDYVY-------------------YLVGMSY- 141
            GK        AAS  +E+I ++P SK +                       Y   +   
Sbjct: 188 LGKESDKALFSAASTFDEFIRKFPRSKLLPEAMLKSAETKEKLGFKNEAIFVYQEMIKNV 247

Query: 142 ---------AQMIRDVPYDQRATKLMLQYMSRIVER----------YTNSPYVKGARFYV 182
                       I ++  +       L+Y +  +++          Y  S Y +      
Sbjct: 248 KDEKYLNIAYTKIGELFSELGQPDKALKYFTDYLQKTKPENSPIYGYVGSIYAQKGD--F 305

Query: 183 TVGRNQLAAKE------------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
               +  +  +              +   Y  +G+  AA+  F      Y D  + + AM
Sbjct: 306 EKASDFFSKYKPKKIDEITPSTLYWMAVTYEHKGDEDAALKLFTTFYNKYQDNNYTDMAM 365

Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQ 259
            +  E  +     D A +++   + ++PQ
Sbjct: 366 YKSGEILLKKGKNDIALDILKDAKNKFPQ 394



 Score = 41.3 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 9/83 (10%)

Query: 105 YSAGKYQQAASLGEEYITQYP-ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           + +  YQ A      YI   P +  N     Y +G SY   I     D     L L+Y++
Sbjct: 783 FISKNYQNAIKNYLNYIKYAPKDDPNHPEALYFLGKSY---IATGDND-----LALKYLT 834

Query: 164 RIVERYTNSPYVKGARFYVTVGR 186
            + +R+ N+ Y   A++ +   +
Sbjct: 835 DLTKRFPNNQYATLAKYEIEDIK 857



 Score = 38.6 bits (89), Expect = 0.92,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 78/210 (37%), Gaps = 26/210 (12%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL-------LMSAFVQYSA 107
           + +  ++  A  +  + + ++A  Y ++   +FP      ++L              Y  
Sbjct: 478 KKEEIIFNLASEYFGKGDMAQASTYIDRLINEFPKTKYLAEALKLKEEMEYSRIKSLYDN 537

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGM---SYAQMIRDVPYDQRATKLMLQYMSR 164
            KY  A    E+Y+T   ++  +   +Y   +    +   I  +  D     L      +
Sbjct: 538 KKYADALKNIEKYLTSN-KNPILRDKWYQ--LWEDIFFAYINSLKSDPIKFGL---NARQ 591

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
            +  + NS  V   +  +T  +N     E E     LK  +Y   I  +Q    N +D +
Sbjct: 592 FITLFPNSKRVAELKDQIT--KNL--QNEFESI---LKTNDYYTIIVFYQ---KNRNDLD 641

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQ 254
            +++    + +   AL ++ E  +   LI+
Sbjct: 642 RSDKREYYISKVAYALYMVGEKEKSAQLIK 671



 Score = 36.2 bits (83), Expect = 5.4,   Method: Composition-based stats.
 Identities = 7/54 (12%), Positives = 19/54 (35%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
           D  +   +Y     ++   +   A +Y    ++ FP    A  +      +++ 
Sbjct: 806 DPNHPEALYFLGKSYIATGDNDLALKYLTDLTKRFPNNQYATLAKYEIEDIKWK 859


>gi|256830595|ref|YP_003159323.1| N-acetylmuramoyl-L-alanine amidase [Desulfomicrobium baculatum DSM
           4028]
 gi|256579771|gb|ACU90907.1| N-acetylmuramoyl-L-alanine amidase [Desulfomicrobium baculatum DSM
           4028]
          Length = 644

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/170 (11%), Positives = 52/170 (30%), Gaps = 16/170 (9%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           +L I  ++A+         +S            +   +  +    L+ + +    + F +
Sbjct: 6   SLGIVLTLALVLGFACTALASAKSEYTRGV-SAFNSLLANEKRSGLRTE-WEAVMKPFLR 63

Query: 83  CSRDFPFAGVARKSLLMSAFVQ-------YSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
                P +  A +S+              +S     +A    +  +  YP+    D   +
Sbjct: 64  AVGADPKSEYAPRSMFFLGRCYEELARRSFSRTDRLKALEAYDRMLAVYPKHGWADDALF 123

Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            +G+ + +  +D            +  + ++  Y     V  AR  +   
Sbjct: 124 RMGLVWLEQFKDPVR-------ASKVFTAVLNDYPKGDKVPEARERLAQI 166



 Score = 38.9 bits (90), Expect = 0.73,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 40/111 (36%), Gaps = 14/111 (12%)

Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
           P+S+      + +G  Y ++ R   + +      L+   R++  Y    +   A F + +
Sbjct: 69  PKSEYAPRSMFFLGRCYEELARR-SFSRTDRLKALEAYDRMLAVYPKHGWADDALFRMGL 127

Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
                         +  +  + V A   F  VL +Y   +   EA  RL +
Sbjct: 128 V-------------WLEQFKDPVRASKVFTAVLNDYPKGDKVPEARERLAQ 165



 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 49/131 (37%), Gaps = 11/131 (8%)

Query: 135 YLVGMSYAQMI---RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
           Y  G+S    +         +   + +++   R V     S Y   + F++     +LA 
Sbjct: 31  YTRGVSAFNSLLANEKRSGLRTEWEAVMKPFLRAVGADPKSEYAPRSMFFLGRCYEELAR 90

Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY-VALALMDEAREVV 250
           +          R + + A+  +  +LA Y     A++A+ R+   +         A +V 
Sbjct: 91  RSFS-------RTDRLKALEAYDRMLAVYPKHGWADDALFRMGLVWLEQFKDPVRASKVF 143

Query: 251 SLIQERYPQGY 261
           + +   YP+G 
Sbjct: 144 TAVLNDYPKGD 154


>gi|317491199|ref|ZP_07949635.1| tol-pal system protein YbgF [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316920746|gb|EFV42069.1| tol-pal system protein YbgF [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 267

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 45/126 (35%), Gaps = 9/126 (7%)

Query: 61  YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y +AV   L ++   +A   F    + +P +     +      + Y+ GK   +A     
Sbjct: 150 YNRAVDLVLVKKQNDQAITAFQSFVKQYPDSTYQPNANYWLGQLFYNKGKKDDSAYYFAV 209

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       Y VG+        +  ++           +++++Y  S   K A+
Sbjct: 210 VVKNYPKSPKAPEAMYKVGV--------IMQEKGQVDKAKAVYQQVIKQYPTSDSAKQAQ 261

Query: 180 FYVTVG 185
             +   
Sbjct: 262 KRIAAL 267



 Score = 59.4 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 50/131 (38%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +      D+   ++     +      V++Y +S Y   A +++               
Sbjct: 146 ANTDYNRAVDLVLVKKQNDQAITAFQSFVKQYPDSTYQPNANYWLGQL------------ 193

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
            +Y K  +  +A   F +V+ NY  +  A EAM ++         +D+A+ V   + ++Y
Sbjct: 194 -FYNKGKKDDSA-YYFAVVVKNYPKSPKAPEAMYKVGVIMQEKGQVDKAKAVYQQVIKQY 251

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 252 PTSDSAKQAQK 262



 Score = 45.5 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 47/127 (37%), Gaps = 22/127 (17%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +  QA +  + ++ QYP+S       Y +G  +    +              Y + +V+
Sbjct: 161 KQNDQAITAFQSFVKQYPDSTYQPNANYWLGQLFYNKGKKDD--------SAYYFAVVVK 212

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y  SP    A + V V                 ++G+   A   +Q V+  Y  ++ A+
Sbjct: 213 NYPKSPKAPEAMYKVGVIMQ--------------EKGQVDKAKAVYQQVIKQYPTSDSAK 258

Query: 228 EAMARLV 234
           +A  R+ 
Sbjct: 259 QAQKRIA 265



 Score = 39.3 bits (91), Expect = 0.56,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 1/89 (1%)

Query: 47  YLDSVTDVRY-QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
           ++    D  Y     Y    LF  +     +  YF    +++P +  A +++     +  
Sbjct: 173 FVKQYPDSTYQPNANYWLGQLFYNKGKKDDSAYYFAVVVKNYPKSPKAPEAMYKVGVIMQ 232

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVY 134
             G+  +A ++ ++ I QYP S +     
Sbjct: 233 EKGQVDKAKAVYQQVIKQYPTSDSAKQAQ 261


>gi|197284483|ref|YP_002150355.1| hypothetical protein PMI0586 [Proteus mirabilis HI4320]
 gi|194681970|emb|CAR41404.1| putative exported protein [Proteus mirabilis HI4320]
          Length = 257

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 48/126 (38%), Gaps = 9/126 (7%)

Query: 61  YEKAVL-FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A+   L  +++ KA    N   + +P +     +      + Y  G   QAAS    
Sbjct: 140 YNAAIDIVLNSKDYDKAIVALNNFIKSYPKSSYQSNAQFWLGQMYYLKGNKDQAASTFAI 199

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S+     +Y +G+        +  ++           ++V++Y NS   K A+
Sbjct: 200 VVKNYPKSQKASEAFYKIGL--------IMQEKGQKDNAKAIYQQVVKQYPNSAGAKLAQ 251

Query: 180 FYVTVG 185
             +   
Sbjct: 252 KQLAAL 257



 Score = 51.7 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 50/129 (38%), Gaps = 14/129 (10%)

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           +      D+  + +     +  ++  ++ Y  S Y   A+F++                Y
Sbjct: 138 ADYNAAIDIVLNSKDYDKAIVALNNFIKSYPKSSYQSNAQFWLGQM-------------Y 184

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           YLK  +  AA   F +V+ NY  ++ A EA  ++          D A+ +   + ++YP 
Sbjct: 185 YLKGNKDQAAST-FAIVVKNYPKSQKASEAFYKIGLIMQEKGQKDNAKAIYQQVVKQYPN 243

Query: 260 GYWARYVET 268
              A+  + 
Sbjct: 244 SAGAKLAQK 252


>gi|119510384|ref|ZP_01629518.1| Serine/Threonine protein kinase with TPR repeats [Nodularia
           spumigena CCY9414]
 gi|119464913|gb|EAW45816.1| Serine/Threonine protein kinase with TPR repeats [Nodularia
           spumigena CCY9414]
          Length = 671

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 78/254 (30%), Gaps = 75/254 (29%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFN---QCSRD------------FPFAGVAR-------- 94
            ++Y++ +   +  N+  A E F        +            +      +        
Sbjct: 314 EKLYQEGLKKYQAGNYQAAVENFTQAIALDSENASAYNKRGNAFYQLGDYQQAKADTTKA 373

Query: 95  --------KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
                    +     F  Y  GKY++A S   + I     +    Y YY  G++  QM  
Sbjct: 374 IELNPQNANAYYDRGFALYELGKYKEAISDYTKAIELNSGN---AYAYYGRGLALVQM-- 428

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL-----AAKEVEI----- 196
                 +  +   +  S  +    N  Y+  A     + R +L     A ++ +      
Sbjct: 429 ------QENRDANEDFSTAIRLQPN--YI-EAYLQRGILRRRLKIYRTANQDFDAIIKIN 479

Query: 197 ---GRYYLKRG--------EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA--LALM 243
               R Y ++G        +Y AAI  +   +    +      A+A L    +   L   
Sbjct: 480 PDDARPYYQKGLIQASNNQKY-AAIKEYTQAINRNPNY-----AVAYLRRGNMHSELGYK 533

Query: 244 DEA-REVVSLIQER 256
            EA  +   ++Q  
Sbjct: 534 LEATEDYNRVLQLN 547


>gi|293651727|pdb|2WQH|A Chain A, Crystal Structure Of Ctpr3y3
          Length = 125

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 45/117 (38%), Gaps = 14/117 (11%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y     + K+ ++ +A EY+ +    +P      ++        Y  G Y +A    ++ 
Sbjct: 13  YNLGNAYYKQGDYDEAIEYYQKALELYPNNA---EAWYNLGNAYYKQGDYDEAIEYYQKA 69

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           +  YP +      +Y +G +Y +        Q      ++Y  + +E Y N+   K 
Sbjct: 70  LELYPNN---AEAWYNLGNAYYK--------QGDYDEAIEYYQKALELYPNNAEAKQ 115



 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 46/130 (35%), Gaps = 28/130 (21%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           + ++        Y  G Y +A    ++ +  YP +      +Y +G +Y +        Q
Sbjct: 8   SAEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNN---AEAWYNLGNAYYK--------Q 56

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
                 ++Y  + +E Y N+                       +G  Y K+G+Y  AI  
Sbjct: 57  GDYDEAIEYYQKALELYPNNAEAW-----------------YNLGNAYYKQGDYDEAIEY 99

Query: 213 FQLVLANYSD 222
           +Q  L  Y +
Sbjct: 100 YQKALELYPN 109



 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 32/136 (23%), Positives = 47/136 (34%), Gaps = 28/136 (20%)

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           N    +Y +G +Y +        Q      ++Y  + +E Y N+                
Sbjct: 7   NSAEAWYNLGNAYYK--------QGDYDEAIEYYQKALELYPNNAEAW------------ 46

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
                  +G  Y K+G+Y  AI  +Q  L  Y +     EA   L  AY      DEA E
Sbjct: 47  -----YNLGNAYYKQGDYDEAIEYYQKALELYPN---NAEAWYNLGNAYYKQGDYDEAIE 98

Query: 249 VVSLIQERYPQGYWAR 264
                 E YP    A+
Sbjct: 99  YYQKALELYPNNAEAK 114


>gi|294637419|ref|ZP_06715710.1| putative tol-pal system protein YbgF [Edwardsiella tarda ATCC
           23685]
 gi|291089412|gb|EFE21973.1| putative tol-pal system protein YbgF [Edwardsiella tarda ATCC
           23685]
          Length = 252

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 9/123 (7%)

Query: 61  YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y +AV   L ++   +A   F    + +P +     +      + YS GK   AA     
Sbjct: 137 YNRAVDLVLVKKQNDQAISAFQTFIKQYPDSTYQPNANYWLGQLYYSKGKKDDAAYYYAV 196

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       Y VG+        +  ++  +        +++++Y NS   K A+
Sbjct: 197 VVKNYPKSPKAPESMYKVGV--------IMQEKGQSDKAHAVFQQVLKQYPNSEAAKLAQ 248

Query: 180 FYV 182
             +
Sbjct: 249 KRL 251



 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 49/131 (37%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +      D+   ++     +      +++Y +S Y   A +++              G
Sbjct: 133 ANTDYNRAVDLVLVKKQNDQAISAFQTFIKQYPDSTYQPNANYWL--------------G 178

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           + Y  +G+   A   + +V+ NY  +  A E+M ++          D+A  V   + ++Y
Sbjct: 179 QLYYSKGKKDDAAYYYAVVVKNYPKSPKAPESMYKVGVIMQEKGQSDKAHAVFQQVLKQY 238

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 239 PNSEAAKLAQK 249



 Score = 43.6 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 47/126 (37%), Gaps = 22/126 (17%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +  QA S  + +I QYP+S       Y +G  Y    +              Y + +V+
Sbjct: 148 KQNDQAISAFQTFIKQYPDSTYQPNANYWLGQLYYSKGKKDD--------AAYYYAVVVK 199

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y  SP    + + V V                 ++G+   A   FQ VL  Y ++E A+
Sbjct: 200 NYPKSPKAPESMYKVGVIMQ--------------EKGQSDKAHAVFQQVLKQYPNSEAAK 245

Query: 228 EAMARL 233
            A  RL
Sbjct: 246 LAQKRL 251


>gi|320105078|ref|YP_004180669.1| tetratricopeptide repeat-containing protein [Isosphaera pallida
           ATCC 43644]
 gi|319752360|gb|ADV64120.1| Tetratricopeptide TPR_1 repeat-containing protein [Isosphaera
           pallida ATCC 43644]
          Length = 500

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 49/138 (35%), Gaps = 31/138 (22%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV--------QYSAGKYQQAASLGEEYIT 122
            ++ +A  Y+ Q   ++P +  A ++ L +            Y     ++  +L  ++ T
Sbjct: 334 GSYDEAARYYTQVVTEYPKSPEALRARLDAIDAKLKAYVGPNYDGQHLEECKTLIRQFQT 393

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ---------------YMSRIVE 167
             P+   ++   Y   +     I+    DQ A +  L+                   I  
Sbjct: 394 LAPDQPEINAALY-RAL---DQIK----DQEAQRAFLRGEYYMSIGKVTSAEYMFGSIPR 445

Query: 168 RYTNSPYVKGARFYVTVG 185
           ++  S YV+ AR  + + 
Sbjct: 446 KWPQSRYVEPARERLEIL 463



 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 61/164 (37%), Gaps = 11/164 (6%)

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            +   +     P   +A ++ L+ A    S G Y +AA    + +T+YP+S        L
Sbjct: 303 VQLLERIRHHDPQGPLAPRAALLIADYYASIGSYDEAARYYTQVVTEYPKSPEA-----L 357

Query: 137 VGM-----SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY-VTVGRNQLA 190
                   +  +      YD +  +     + +      + P +  A +  +   ++Q A
Sbjct: 358 RARLDAIDAKLKAYVGPNYDGQHLEECKTLIRQFQTLAPDQPEINAALYRALDQIKDQEA 417

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
            +    G YY+  G+  +A   F  +   +  + + E A  RL 
Sbjct: 418 QRAFLRGEYYMSIGKVTSAEYMFGSIPRKWPQSRYVEPARERLE 461



 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 58/199 (29%), Gaps = 54/199 (27%)

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD------YVY--YL 136
           R +        +      VQ+  G++  A    ++ I  YP ++++D      Y    Y 
Sbjct: 161 RRYENTSWGEAAQFKLGLVQFRRGRFTAARDSFDKAIKTYPGTRHLDVILAHQYALGEYW 220

Query: 137 VGMSYAQMIRD----------VPYDQRATKLMLQYMS-----RIVE----RYTNS-PYVK 176
           + M+  ++ +             +D + T   L   S     R+V+        S     
Sbjct: 221 LKMASPELAQGRIVDPETSPLRQFDDKLTTAALTSASTTADGRVVKLARANDPASYQIPL 280

Query: 177 GARFYVTVGRNQL-----AAK---------------------EVEIGRYYLKRGEYVAAI 210
               ++   + +L                              + I  YY   G Y  A 
Sbjct: 281 DKPSWIDRLKGRLPLVDSGGHGVQLLERIRHHDPQGPLAPRAALLIADYYASIGSYDEAA 340

Query: 211 PRFQLVLANYSDAEHAEEA 229
             +  V+  Y  +  A  A
Sbjct: 341 RYYTQVVTEYPKSPEALRA 359


>gi|42523572|ref|NP_968952.1| hypothetical protein Bd2102 [Bdellovibrio bacteriovorus HD100]
 gi|39575778|emb|CAE79945.1| conserved hypothetical protein with TRP repeat [Bdellovibrio
           bacteriovorus HD100]
          Length = 224

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 47/121 (38%), Gaps = 8/121 (6%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +YEK   +   Q + +A   F Q    +P +  + ++    A   +    Y+ +    +E
Sbjct: 106 IYEKGKRYFNGQQYDRAIREFGQLLEKYPLSQHSVEARFFIAESYFLKKDYRSSLGQIDE 165

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +TQYP+     ++   +G      I ++      T+   +    + + + N    K AR
Sbjct: 166 MVTQYPQHDLTGFILLRMG-----QISEIN---SQTEEAAEIYKTVAKNFKNENLKKQAR 217

Query: 180 F 180
            
Sbjct: 218 K 218



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/139 (13%), Positives = 47/139 (33%), Gaps = 22/139 (15%)

Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
             Y  G  Y        YD+      ++   +++E+Y  S +   AR             
Sbjct: 105 AIYEKGKRYFN---GQQYDR-----AIREFGQLLEKYPLSQHSVEAR------------- 143

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
              I   Y  + +Y +++ +   ++  Y   +     + R+ +     +  +EA E+   
Sbjct: 144 -FFIAESYFLKKDYRSSLGQIDEMVTQYPQHDLTGFILLRMGQISEINSQTEEAAEIYKT 202

Query: 253 IQERYPQGYWARYVETLVK 271
           + + +      +    L +
Sbjct: 203 VAKNFKNENLKKQARKLAQ 221


>gi|124514219|gb|EAY55734.1| putative TPR-domain containing protein [Leptospirillum rubarum]
          Length = 274

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 46/116 (39%), Gaps = 8/116 (6%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
                +Y +A+   +  ++  + + F Q    +P + +A  +       +++   Y +A 
Sbjct: 150 PSADILYRQAMNDYQTGHYQLSKKEFGQVVSLYPQSHLASSAEFWVGQSEFNMKHYDKAV 209

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           S   + I  YP+S      Y+ +G SY  + +         K  +    R++E + 
Sbjct: 210 SSFLQVIKNYPDSPKRAVAYFKLGRSYESLGKK--------KDAIHSYRRVLELFP 257



 Score = 54.4 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 44/134 (32%), Gaps = 25/134 (18%)

Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
           P S ++    Y   M+  Q            +L  +   ++V  Y  S     A      
Sbjct: 149 PPSADI---LYRQAMNDYQT--------GHYQLSKKEFGQVVSLYPQSHLASSA------ 191

Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
                   E  +G+       Y  A+  F  V+ NY D+     A  +L  +Y +L    
Sbjct: 192 --------EFWVGQSEFNMKHYDKAVSSFLQVIKNYPDSPKRAVAYFKLGRSYESLGKKK 243

Query: 245 EAREVVSLIQERYP 258
           +A      + E +P
Sbjct: 244 DAIHSYRRVLELFP 257



 Score = 42.4 bits (99), Expect = 0.066,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 44/124 (35%), Gaps = 22/124 (17%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y  G YQ +     + ++ YP+S       + VG S   M        +     +    +
Sbjct: 163 YQTGHYQLSKKEFGQVVSLYPQSHLASSAEFWVGQSEFNM--------KHYDKAVSSFLQ 214

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +++ Y +SP    A F +              GR Y   G+   AI  ++ VL  +    
Sbjct: 215 VIKNYPDSPKRAVAYFKL--------------GRSYESLGKKKDAIHSYRRVLELFPLER 260

Query: 225 HAEE 228
             +E
Sbjct: 261 QLDE 264



 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 24/68 (35%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
                  +++ KA   F Q  +++P +     +         S GK + A       +  
Sbjct: 196 GQSEFNMKHYDKAVSSFLQVIKNYPDSPKRAVAYFKLGRSYESLGKKKDAIHSYRRVLEL 255

Query: 124 YPESKNVD 131
           +P  + +D
Sbjct: 256 FPLERQLD 263


>gi|206561549|ref|YP_002232314.1| hypothetical protein BCAL3205 [Burkholderia cenocepacia J2315]
 gi|198037591|emb|CAR53529.1| putative exported protein [Burkholderia cenocepacia J2315]
          Length = 249

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/137 (13%), Positives = 45/137 (32%), Gaps = 8/137 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
             T    + +    A    +  NF  A   F      +P +     +       QY+   
Sbjct: 121 EGTVQPGETDALSAAQQQFRNGNFKAAAASFRAFIAKYPQSPYQPTAQYWYGNAQYALRD 180

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y+ + +  +  ++++P+          +G         +   Q+A     +   ++V +Y
Sbjct: 181 YRGSTATWQGIVSKFPQHPRAADALVAIG------TNQLEQGQKAA--AKKTFEQVVSQY 232

Query: 170 TNSPYVKGARFYVTVGR 186
             S   + A+  +   +
Sbjct: 233 AGSNAAQTAQGKLETIK 249



 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/109 (12%), Positives = 36/109 (33%), Gaps = 14/109 (12%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         + +Y  SPY   A+++                +Y L+  +Y  +   
Sbjct: 142 GNFKAAAASFRAFIAKYPQSPYQPTAQYW------------YGNAQYALR--DYRGSTAT 187

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +Q +++ +     A +A+  +    +       A++    +  +Y    
Sbjct: 188 WQGIVSKFPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYAGSN 236


>gi|150024618|ref|YP_001295444.1| TPR domain-containing protein [Flavobacterium psychrophilum
           JIP02/86]
 gi|149771159|emb|CAL42626.1| TPR-domain containing protein [Flavobacterium psychrophilum
           JIP02/86]
          Length = 1003

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 77/222 (34%), Gaps = 37/222 (16%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-------KSLLM 99
           Y ++   V +    Y  A    K + + +A  +F +      +  V++        + L 
Sbjct: 491 YPEAKETVEFANVNYNMAYSHFKLKEYEQAGNFFQK------YIEVSKDDKTRLTDAYLR 544

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
            A  ++   +Y  A    ++ I    ++ + DY  +   + Y  M ++           +
Sbjct: 545 LADSKFVTTRYAAALEAYDKAIIL--KTFDADYAAFQKAICYGFMGKN--------DKKI 594

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
              ++ ++ Y NS Y   A                E+   Y    E  ++I  +  ++A 
Sbjct: 595 AGFNQFLKTYPNSQYRDDAL--------------FELANTYTTENETASSIKTYDQLIAE 640

Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            S+  +  +A+ R    Y      ++A      +   +P+  
Sbjct: 641 NSNGSYVSKALLRQGLIYYNADKDEQALTKFKKVVANFPKSE 682



 Score = 49.3 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 34/119 (28%), Gaps = 10/119 (8%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
               K    FNQ  + +P +     +L   A    +  +   +    ++ I +      V
Sbjct: 588 GKNDKKIAGFNQFLKTYPNSQYRDDALFELANTYTTENETASSIKTYDQLIAENSNGSYV 647

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF--YVTVGRN 187
                  G+ Y    +D        +  L    ++V  +  S     A     +    N
Sbjct: 648 SKALLRQGLIYYNADKD--------EQALTKFKKVVANFPKSEEALEAVKTARLIYVDN 698



 Score = 42.0 bits (98), Expect = 0.082,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 78/232 (33%), Gaps = 20/232 (8%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
              YQ+  + + +    + ++ +A   F +   +      + +     A  +Y    +  
Sbjct: 421 KTAYQKVAFYRGLELFTDGSYKEALAIFKKSIAEQKDPKFSARGTFWKAETEYILNDFTN 480

Query: 113 AASLGEEYITQYPESK----------NVDYVY-----YLVGMSYAQMIRDVPYDQRATKL 157
           A    ++++  YPE+K          N+ Y +     Y    ++ Q   +V  D + T+L
Sbjct: 481 ALLSFKQFLG-YPEAKETVEFANVNYNMAYSHFKLKEYEQAGNFFQKYIEVSKDDK-TRL 538

Query: 158 MLQYMSRIVERYTNSPYVK--GARFYVTVGRNQLAAKE-VEIGRYYLKRGEYVAAIPRFQ 214
              Y+     ++  + Y     A     + +   A     +    Y   G+    I  F 
Sbjct: 539 TDAYLRLADSKFVTTRYAAALEAYDKAIILKTFDADYAAFQKAICYGFMGKNDKKIAGFN 598

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
             L  Y ++++ ++A+  L   Y        + +    +      G +    
Sbjct: 599 QFLKTYPNSQYRDDALFELANTYTTENETASSIKTYDQLIAENSNGSYVSKA 650



 Score = 35.9 bits (82), Expect = 5.9,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 57/158 (36%), Gaps = 31/158 (19%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
              ++E A  +  E   + + + ++Q   +        K+LL    + Y+A K +QA + 
Sbjct: 611 DDALFELANTYTTENETASSIKTYDQLIAENSNGSYVSKALLRQGLIYYNADKDEQALTK 670

Query: 117 GEEYITQYPESKNV------------------DYVYYLVGMSYAQMIRDVPYD------- 151
            ++ +  +P+S+                    +Y  ++  + +   I D   D       
Sbjct: 671 FKKVVANFPKSEEALEAVKTARLIYVDNGKVDEYATWVKSLDFVN-ISDSDLDNDSWEAA 729

Query: 152 -----QRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
                Q   K  +  +S  ++ + N   +  A FY+  
Sbjct: 730 EKQYLQGNNKQAITNLSSYIKTFPNGIRILKANFYLAE 767


>gi|265984711|ref|ZP_06097446.1| tol-Pal system YbgF [Brucella sp. 83/13]
 gi|264663303|gb|EEZ33564.1| tol-Pal system YbgF [Brucella sp. 83/13]
          Length = 488

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 54/135 (40%), Gaps = 8/135 (5%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G +  S+ +  + S+        +Y+ A  +L   ++  A   F +  + +P   +  ++
Sbjct: 344 GIQTGSAANDAVASLPTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEA 403

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
                   Y  G+Y +AA+L  +    YP+SK      + +GM+  +M            
Sbjct: 404 RFWLGESLYGQGRYPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNH--------D 455

Query: 157 LMLQYMSRIVERYTN 171
           +     ++I +RY  
Sbjct: 456 VACATFAQIPQRYPK 470



 Score = 44.0 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 8/104 (7%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           SL  +A+    +G Y+ A +   E++ +YP         + +G S     R         
Sbjct: 366 SLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYP------- 418

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
                        Y +S       F + +   ++   +V    +
Sbjct: 419 -EAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATF 461



 Score = 39.3 bits (91), Expect = 0.55,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 14/107 (13%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         V+RY   P    ARF++                    +G Y  A   
Sbjct: 378 GDYKAAEAGFREHVKRYPADPMTAEARFWLGESL--------------YGQGRYPEAATL 423

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           F     +Y D++ A E M +L  A   +   D A    + I +RYP+
Sbjct: 424 FIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYPK 470



 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 23/68 (33%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +    YL  G+Y AA   F+  +  Y       EA   L E+        EA  +    
Sbjct: 368 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 427

Query: 254 QERYPQGY 261
           Q  YP   
Sbjct: 428 QRDYPDSK 435


>gi|254488580|ref|ZP_05101785.1| tetratricopeptide TPR_2 [Roseobacter sp. GAI101]
 gi|214045449|gb|EEB86087.1| tetratricopeptide TPR_2 [Roseobacter sp. GAI101]
          Length = 277

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 49/158 (31%), Gaps = 17/158 (10%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREV-------YEKAVLFLKEQNFSKAYEYFNQC 83
           A   L G E  ++    +          E+       +E+A   L + +F  A + F   
Sbjct: 121 ATSTLGGGEMPATNTAPIAPAAPSTNTAELAVGEASDFERAKAALADGDFRTAADQFATF 180

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGK-YQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
           +  +P   +  ++ L         G   + A +    +    P         Y +G S  
Sbjct: 181 NETYPGGPLGSEADLRRGDALRGLGDIREAARAYLASFSAD-PVGPVAPEALYQLGQSLG 239

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
            +           +     +  +  R+  SP+V  A+ 
Sbjct: 240 AL--------GQVQEGCVTLDEVATRFPASPFVPQAQA 269


>gi|254719696|ref|ZP_05181507.1| TPR repeat-containing protein [Brucella sp. 83/13]
 gi|306837845|ref|ZP_07470707.1| tol-pal system protein YbgF [Brucella sp. NF 2653]
 gi|306407084|gb|EFM63301.1| tol-pal system protein YbgF [Brucella sp. NF 2653]
          Length = 484

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 54/135 (40%), Gaps = 8/135 (5%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G +  S+ +  + S+        +Y+ A  +L   ++  A   F +  + +P   +  ++
Sbjct: 340 GIQTGSAANDAVASLPTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEA 399

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
                   Y  G+Y +AA+L  +    YP+SK      + +GM+  +M            
Sbjct: 400 RFWLGESLYGQGRYPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNH--------D 451

Query: 157 LMLQYMSRIVERYTN 171
           +     ++I +RY  
Sbjct: 452 VACATFAQIPQRYPK 466



 Score = 44.0 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 8/104 (7%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           SL  +A+    +G Y+ A +   E++ +YP         + +G S     R         
Sbjct: 362 SLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYP------- 414

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
                        Y +S       F + +   ++   +V    +
Sbjct: 415 -EAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATF 457



 Score = 39.3 bits (91), Expect = 0.55,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 14/107 (13%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         V+RY   P    ARF++                    +G Y  A   
Sbjct: 374 GDYKAAEAGFREHVKRYPADPMTAEARFWLGESL--------------YGQGRYPEAATL 419

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           F     +Y D++ A E M +L  A   +   D A    + I +RYP+
Sbjct: 420 FIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYPK 466



 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 23/68 (33%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +    YL  G+Y AA   F+  +  Y       EA   L E+        EA  +    
Sbjct: 364 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 423

Query: 254 QERYPQGY 261
           Q  YP   
Sbjct: 424 QRDYPDSK 431


>gi|220906220|ref|YP_002481531.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC
           7425]
 gi|219862831|gb|ACL43170.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425]
          Length = 542

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/227 (12%), Positives = 65/227 (28%), Gaps = 49/227 (21%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           +  A+ I   +++      +           +++       + +A+   ++Q++  A   
Sbjct: 218 FNLAIPINTFLSLASRTALKGFPVP--VAAPLSNQPTTDNFFLQAIAKYRQQDYRGAIAD 275

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQ-----YSAGKYQQAASLGEEYITQYPESKNVDYVY 134
           F++  R  P         L  A+       Y    Y+ A +  +  I   P+   +D  Y
Sbjct: 276 FDRAIRLNP--------QLDLAYSNRGLARYGLQDYRGAVADFDRAIRLNPQ---LDLAY 324

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
           Y  G++   +        +  +       + +           A       R +L     
Sbjct: 325 YNRGLARYGL--------QDYRGARADFDQAIRLNPKD---ADAYNNRGSVRRELQDYRG 373

Query: 195 EIGRY-------------YLKRG-------EYVAAIPRFQLVLANYS 221
            +  +             Y  RG       +Y  A+  F   +    
Sbjct: 374 AVADFDRAIRLNPKFDLAYYNRGITRRKLQDYGGALADFDQAIRLNP 420



 Score = 35.5 bits (81), Expect = 7.4,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 37/112 (33%), Gaps = 14/112 (12%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            Y + +   K Q++  A   F+Q  R  P    A  +     FV+Y    Y  A +  ++
Sbjct: 392 YYNRGITRRKLQDYGGALADFDQAIRLNP--RDA-DAYNNRGFVRYGLQDYGGALADFDQ 448

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            I   PE  ++                 V Y  +  +  +    + +    +
Sbjct: 449 AIRLNPEDADI-----------YNNRGFVRYGLQDYRGAIADFDQAIRLQPD 489


>gi|218549685|ref|YP_002383476.1| tol-pal system protein YbgF [Escherichia fergusonii ATCC 35469]
 gi|218357226|emb|CAQ89861.1| putative RNA binding protein [Escherichia fergusonii ATCC 35469]
 gi|324114317|gb|EGC08286.1| tol-pal system protein YbgF [Escherichia fergusonii B253]
 gi|325498075|gb|EGC95934.1| tol-pal system protein YbgF [Escherichia fergusonii ECD227]
          Length = 263

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 45/126 (35%), Gaps = 9/126 (7%)

Query: 61  YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A+  +++++    A   F    + +P +     +      + Y+ GK   AA     
Sbjct: 146 YNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       + VG+        +  D+  T        +++ +Y  S   K A+
Sbjct: 206 VVKNYPKSPKAADAMFKVGV--------IMQDKGDTAKAKAVYQQVINKYPGSDGAKQAQ 257

Query: 180 FYVTVG 185
             +   
Sbjct: 258 KRLNAM 263



 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 46/131 (35%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      +++Y +S Y+  A +++              G
Sbjct: 142 ANTDYNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYLPNANYWL--------------G 187

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           +    +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 188 QLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVINKY 247

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 248 PGSDGAKQAQK 258



 Score = 49.3 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 43/123 (34%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I +YP+S  +    Y +G       +              Y + +V+ Y 
Sbjct: 160 DDAIVAFQNFIKKYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A F V V                  +G+   A   +Q V+  Y  ++ A++A 
Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVINKYPGSDGAKQAQ 257

Query: 231 ARL 233
            RL
Sbjct: 258 KRL 260


>gi|157369524|ref|YP_001477513.1| tol-pal system protein YbgF [Serratia proteamaculans 568]
 gi|157321288|gb|ABV40385.1| Tol-Pal system YbgF [Serratia proteamaculans 568]
          Length = 266

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 45/124 (36%), Gaps = 9/124 (7%)

Query: 61  YEKAVL-FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  AV   L+++ + +A   F    + +P +     +      + Y+ GK   AA     
Sbjct: 150 YNAAVSLALEKKQYDQAISAFQSFVKQYPKSTYQPNANYWLGQLFYNKGKKDDAAYYYAV 209

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  Y +S       Y VG+        +  ++           +++++Y  S   K A+
Sbjct: 210 VVKNYAKSPKAPDAMYKVGI--------IMQEKGQADKAKAVFQQVIKQYPTSAAAKQAK 261

Query: 180 FYVT 183
             V 
Sbjct: 262 SRVA 265



 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 50/129 (38%), Gaps = 14/129 (10%)

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           S       +  +++     +      V++Y  S Y   A +++                +
Sbjct: 148 SDYNAAVSLALEKKQYDQAISAFQSFVKQYPKSTYQPNANYWLGQL-------------F 194

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           Y K  +  AA   + +V+ NY+ +  A +AM ++          D+A+ V   + ++YP 
Sbjct: 195 YNKGKKDDAA-YYYAVVVKNYAKSPKAPDAMYKVGIIMQEKGQADKAKAVFQQVIKQYPT 253

Query: 260 GYWARYVET 268
              A+  ++
Sbjct: 254 SAAAKQAKS 262


>gi|107021873|ref|YP_620200.1| hypothetical protein Bcen_0315 [Burkholderia cenocepacia AU 1054]
 gi|116688821|ref|YP_834444.1| hypothetical protein Bcen2424_0798 [Burkholderia cenocepacia
           HI2424]
 gi|170732120|ref|YP_001764067.1| tol-pal system protein YbgF [Burkholderia cenocepacia MC0-3]
 gi|105892062|gb|ABF75227.1| conserved hypothetical protein [Burkholderia cenocepacia AU 1054]
 gi|116646910|gb|ABK07551.1| conserved hypothetical protein [Burkholderia cenocepacia HI2424]
 gi|169815362|gb|ACA89945.1| tol-pal system protein YbgF [Burkholderia cenocepacia MC0-3]
          Length = 249

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/137 (13%), Positives = 45/137 (32%), Gaps = 8/137 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
             T    + +    A    +  NF  A   F      +P +     +       QY+   
Sbjct: 121 EGTVQPGETDALSAAQQQFRNGNFKAAAASFRAFIAKYPQSPYQPTAQYWYGNAQYALRD 180

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y+ + +  +  ++++P+          +G         +   Q+A     +   ++V +Y
Sbjct: 181 YRGSTATWQGIVSKFPQHPRAADALVAIG------TNQLEQGQKAA--AKKTFEQVVSQY 232

Query: 170 TNSPYVKGARFYVTVGR 186
             S   + A+  +   +
Sbjct: 233 AGSNAAQTAQGKLETIK 249



 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/109 (12%), Positives = 36/109 (33%), Gaps = 14/109 (12%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         + +Y  SPY   A+++                +Y L+  +Y  +   
Sbjct: 142 GNFKAAAASFRAFIAKYPQSPYQPTAQYW------------YGNAQYALR--DYRGSTAT 187

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +Q +++ +     A +A+  +    +       A++    +  +Y    
Sbjct: 188 WQGIVSKFPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYAGSN 236


>gi|260173188|ref|ZP_05759600.1| TPR domain-containing protein [Bacteroides sp. D2]
 gi|315921462|ref|ZP_07917702.1| TPR domain-containing protein [Bacteroides sp. D2]
 gi|313695337|gb|EFS32172.1| TPR domain-containing protein [Bacteroides sp. D2]
          Length = 1005

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 43/206 (20%), Positives = 78/206 (37%), Gaps = 31/206 (15%)

Query: 44  RDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSR-DFPFAGVA--RKSLLM 99
           + + L+   +     + Y +    +L  ++F +A  Y++Q  + + P    +  + +L+ 
Sbjct: 534 KYIQLEKGENTTALADAYNRIGDCYLHVRSFEEAKHYYSQAEQMNTPSGDYSFYQLALVS 593

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
                     Y    +L    + +YP S       Y  G SY  M  +           +
Sbjct: 594 G-----LQKDYSGKITLLNRLVGKYPSSPYAVNAIYEKGRSYVLMDNN--------NQAI 640

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
                ++ +Y  SP  + A                EIG  Y ++G+Y  AI  ++ V+  
Sbjct: 641 TSFKELLSKYPESPVSRKAAA--------------EIGLLYYQKGDYNQAIGAYKEVIEK 686

Query: 220 YSDAEHAEEAMARLVEAYVALALMDE 245
           Y  +E A  AM  L   YV L  +DE
Sbjct: 687 YPGSEEARLAMRDLKSIYVDLNRIDE 712



 Score = 54.0 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 74/214 (34%), Gaps = 28/214 (13%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           Y    +    +++++A  YF +     +      +A  +             +++A    
Sbjct: 513 YNLGYIAFHRKDYTQASNYFQKYIQLEKGENTTALA-DAYNRIGDCYLHVRSFEEAKHYY 571

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
            +       + + DY +Y + +                   +  ++R+V +Y +SPY   
Sbjct: 572 SQAEQMN--TPSGDYSFYQLALVSGLQKDYSGK--------ITLLNRLVGKYPSSPYAVN 621

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           A                E GR Y+       AI  F+ +L+ Y ++  + +A A +   Y
Sbjct: 622 AI--------------YEKGRSYVLMDNNNQAITSFKELLSKYPESPVSRKAAAEIGLLY 667

Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
                 ++A      + E+YP    AR     +K
Sbjct: 668 YQKGDYNQAIGAYKEVIEKYPGSEEARLAMRDLK 701



 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/267 (14%), Positives = 76/267 (28%), Gaps = 55/267 (20%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
           +C  +            D  T       +Y++     +E+N++ A        +  P A 
Sbjct: 9   ICAAICCTPMIGFAQTSDKFTST---DNLYKEGKELFQEKNYAAALPALKAFVKQKPAAS 65

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-------- 143
           + + +  M A   Y      +   +  +Y+ +YP++   + +Y L+   Y          
Sbjct: 66  LLQDAEYMLASSAYELKDKNR-IEILRKYLDRYPDTPYANRIYALLASCYFYEGKYDEAL 124

Query: 144 ---------MIRDVPYDQ------------RATKLMLQYMSRIVERYTNSPYVKGARFYV 182
                    ++ +   D                +    +   +        Y K   +Y+
Sbjct: 125 ALFNSADLGLLGNEERDDCTYQLATCYLKTDNLREAAIWFETLRANSP--KYAKDCDYYL 182

Query: 183 TVGRNQLAAKE--------------------VEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
           +  R                             I   Y +   Y  A    Q  L+ Y +
Sbjct: 183 SYIRYTQKRYNEALKGFLPLQDDSKYKALVPYYIAEIYAQLQNYDKAQIVAQNYLSAYPN 242

Query: 223 AEHAEEAMARLVEAYVALALMDEAREV 249
            EHA E    L +AY       +A E 
Sbjct: 243 NEHAAEMYRILGDAYYHFGQYHQAVEA 269



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 74/210 (35%), Gaps = 16/210 (7%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A ++ + QN+ KA          +P    A +   +     Y  G+Y QA      Y
Sbjct: 214 YYIAEIYAQLQNYDKAQIVAQNYLSAYPNNEHAAEMYRILGDAYYHFGQYHQAVEAFNNY 273

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR-----ATKLMLQYMSRIVERYTNSPYV 175
           + +   +   D   Y++G+SY Q        +           L   + +    +     
Sbjct: 274 LNKDHSAPRRD-ALYMLGLSYYQTKVYSKAAETLGKVTTANDALTQNAYLHMGLSYLQLA 332

Query: 176 KGARFYVTVGRNQLAAKEVEI---GRYYL-------KRGEYVAAIPRFQLVLANYSDAEH 225
           + ++  +   +   ++  ++I     Y             +  ++  F+  L  +  + +
Sbjct: 333 EKSKARMAFEQAAASSANMQIKEQAAYNYALCLHETSFSAFGESVTAFEKFLNEFPTSPY 392

Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQE 255
           AE+  + LVE Y+     D A + +  I +
Sbjct: 393 AEKVSSYLVEVYMNTRSYDAALKSIDRIAK 422



 Score = 40.9 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 79/212 (37%), Gaps = 29/212 (13%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL--LMSAFVQ 104
           Y +S    +   E+    +L+ ++ ++++A   + +    +P +  AR ++  L S +V 
Sbjct: 650 YPESPVSRKAAAEI---GLLYYQKGDYNQAIGAYKEVIEKYPGSEEARLAMRDLKSIYVD 706

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
            +      A +         P     D       ++YA   +   Y +   +     +++
Sbjct: 707 LNRIDEFAALANAM------PGHIRFD-ANEQDSLTYAAAEK--IYIKGRMEEAKTSLNK 757

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
            ++ +    +   A +Y+ +  N+    ++ +    L  G+           L  Y +  
Sbjct: 758 YLQTFPEGAFSLNAHYYLCLIGNEQKNYDMVL----LHSGK-----------LLEYPNNP 802

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            AEEA+    E       M EA     +++E+
Sbjct: 803 FAEEALILRAEVQFNQQNMAEALASYKMLKEK 834


>gi|327393168|dbj|BAK10590.1| TPR domain protein YbgF [Pantoea ananatis AJ13355]
          Length = 268

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 46/123 (37%), Gaps = 9/123 (7%)

Query: 61  YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  AV   L+++ + +A        + +P +     +      + Y+ GK   AA     
Sbjct: 151 YNAAVALILEKKQYDQAIAALQAWVKRYPDSTYQPNANYWLGQLFYNKGKKDDAAYYYAT 210

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            + QYP+S         VG+        +  ++  T        ++++ Y ++   K A+
Sbjct: 211 VVKQYPKSPKAAEALLKVGV--------IMQEKNDTAKAKAVYQQVIKLYPDTESAKQAQ 262

Query: 180 FYV 182
             +
Sbjct: 263 KRL 265



 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 47/126 (37%), Gaps = 22/126 (17%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +Y QA +  + ++ +YP+S       Y +G  +    +              Y + +V+
Sbjct: 162 KQYDQAIAALQAWVKRYPDSTYQPNANYWLGQLFYNKGKKDD--------AAYYYATVVK 213

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
           +Y  SP    A   V V                 ++ +   A   +Q V+  Y D E A+
Sbjct: 214 QYPKSPKAAEALLKVGVIMQ--------------EKNDTAKAKAVYQQVIKLYPDTESAK 259

Query: 228 EAMARL 233
           +A  RL
Sbjct: 260 QAQKRL 265



 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 46/131 (35%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             S       +  +++     +  +   V+RY +S Y   A +++               
Sbjct: 147 ANSDYNAAVALILEKKQYDQAIAALQAWVKRYPDSTYQPNANYWLGQL------------ 194

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
            +Y K  +  AA   +  V+  Y  +  A EA+ ++           +A+ V   + + Y
Sbjct: 195 -FYNKGKKDDAA-YYYATVVKQYPKSPKAAEALLKVGVIMQEKNDTAKAKAVYQQVIKLY 252

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 253 PDTESAKQAQK 263



 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 2/71 (2%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           L++ +Y  AI   Q  +  Y D+ +   A   L + +      D+A    + + ++YP+ 
Sbjct: 159 LEKKQYDQAIAALQAWVKRYPDSTYQPNANYWLGQLFYNKGKKDDAAYYYATVVKQYPKS 218

Query: 261 YWARYVETLVK 271
              +  E L+K
Sbjct: 219 --PKAAEALLK 227


>gi|291616742|ref|YP_003519484.1| YbgF [Pantoea ananatis LMG 20103]
 gi|291151772|gb|ADD76356.1| YbgF [Pantoea ananatis LMG 20103]
          Length = 268

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 46/123 (37%), Gaps = 9/123 (7%)

Query: 61  YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  AV   L+++ + +A        + +P +     +      + Y+ GK   AA     
Sbjct: 151 YNAAVALILEKKQYDQAIAALQAWVKRYPDSTYQPNANYWLGQLFYNKGKKDDAAYYYAT 210

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            + QYP+S         VG+        +  ++  T        ++++ Y ++   K A+
Sbjct: 211 VVKQYPKSPKAAEALLKVGV--------IMQEKNDTAKAKAVYQQVIKLYPDTESAKQAQ 262

Query: 180 FYV 182
             +
Sbjct: 263 KRL 265



 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 47/126 (37%), Gaps = 22/126 (17%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +Y QA +  + ++ +YP+S       Y +G  +    +              Y + +V+
Sbjct: 162 KQYDQAIAALQAWVKRYPDSTYQPNANYWLGQLFYNKGKKDD--------AAYYYATVVK 213

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
           +Y  SP    A   V V                 ++ +   A   +Q V+  Y D E A+
Sbjct: 214 QYPKSPKAAEALLKVGVIMQ--------------EKNDTAKAKAVYQQVIKLYPDTESAK 259

Query: 228 EAMARL 233
           +A  RL
Sbjct: 260 QAQKRL 265



 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 46/131 (35%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             S       +  +++     +  +   V+RY +S Y   A +++               
Sbjct: 147 ANSDYNAAVALILEKKQYDQAIAALQAWVKRYPDSTYQPNANYWLGQL------------ 194

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
            +Y K  +  AA   +  V+  Y  +  A EA+ ++           +A+ V   + + Y
Sbjct: 195 -FYNKGKKDDAA-YYYATVVKQYPKSPKAAEALLKVGVIMQEKNDTAKAKAVYQQVIKLY 252

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 253 PDTESAKQAQK 263



 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 2/71 (2%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           L++ +Y  AI   Q  +  Y D+ +   A   L + +      D+A    + + ++YP+ 
Sbjct: 159 LEKKQYDQAIAALQAWVKRYPDSTYQPNANYWLGQLFYNKGKKDDAAYYYATVVKQYPKS 218

Query: 261 YWARYVETLVK 271
              +  E L+K
Sbjct: 219 --PKAAEALLK 227


>gi|332993880|gb|AEF03935.1| tetratricopeptide TPR_2 [Alteromonas sp. SN2]
          Length = 262

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 47/128 (36%), Gaps = 22/128 (17%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
            + +Y +A    + +I ++P S+     +Y +G              +     ++  + +
Sbjct: 154 KSREYDKAIPAFQSFIQRFPNSEYAPNAHYWLGQLLFNK--------QQWNDAIEQFNIV 205

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
             R+++S     A   + V     A           + G+   A   FQ V++ Y ++  
Sbjct: 206 SNRFSDSVKRPDALLKLGVI----AE----------RTGDSSGARNFFQQVISEYPNSSA 251

Query: 226 AEEAMARL 233
              A +RL
Sbjct: 252 KRLAESRL 259



 Score = 54.4 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 39/116 (33%), Gaps = 14/116 (12%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           R     +      ++R+ NS Y   A +++                    + ++  AI +
Sbjct: 156 REYDKAIPAFQSFIQRFPNSEYAPNAHYWLGQLL--------------FNKQQWNDAIEQ 201

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           F +V   +SD+    +A+ +L            AR     +   YP     R  E+
Sbjct: 202 FNIVSNRFSDSVKRPDALLKLGVIAERTGDSSGARNFFQQVISEYPNSSAKRLAES 257



 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 28/67 (41%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y    L   +Q ++ A E FN  S  F  +     +LL    +    G    A +  ++ 
Sbjct: 183 YWLGQLLFNKQQWNDAIEQFNIVSNRFSDSVKRPDALLKLGVIAERTGDSSGARNFFQQV 242

Query: 121 ITQYPES 127
           I++YP S
Sbjct: 243 ISEYPNS 249


>gi|261214663|ref|ZP_05928944.1| tol-Pal system YbgF [Brucella abortus bv. 3 str. Tulya]
 gi|260916270|gb|EEX83131.1| tol-Pal system YbgF [Brucella abortus bv. 3 str. Tulya]
          Length = 488

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 53/136 (38%), Gaps = 8/136 (5%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
            G +   + +  + S+        +Y+ A  +L   ++  A   F +  + +P   +  +
Sbjct: 343 GGIQTGGAANDAVASLPTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAE 402

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +        Y  G+Y +AA+L  +    YP+SK      + +GM+  +M           
Sbjct: 403 ARFWLGESLYGQGRYPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNH-------- 454

Query: 156 KLMLQYMSRIVERYTN 171
            +     ++I +RY  
Sbjct: 455 DVACATFAQIPQRYPK 470



 Score = 44.0 bits (103), Expect = 0.022,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 8/104 (7%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           SL  +A+    +G Y+ A +   E++ +YP         + +G S     R         
Sbjct: 366 SLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYP------- 418

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
                        Y +S       F + +   ++   +V    +
Sbjct: 419 -EAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATF 461



 Score = 39.7 bits (92), Expect = 0.47,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 14/107 (13%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         V+RY   P    ARF++                    +G Y  A   
Sbjct: 378 GDYKAAEAGFREHVKRYPADPMTAEARFWLGESL--------------YGQGRYPEAATL 423

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           F     +Y D++ A E M +L  A   +   D A    + I +RYP+
Sbjct: 424 FIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYPK 470



 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 23/68 (33%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +    YL  G+Y AA   F+  +  Y       EA   L E+        EA  +    
Sbjct: 368 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 427

Query: 254 QERYPQGY 261
           Q  YP   
Sbjct: 428 QRDYPDSK 435


>gi|255535140|ref|YP_003095511.1| TPR-domain containing protein [Flavobacteriaceae bacterium 3519-10]
 gi|255341336|gb|ACU07449.1| TPR-domain containing protein [Flavobacteriaceae bacterium 3519-10]
          Length = 987

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 77/207 (37%), Gaps = 31/207 (14%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+    + K + F++A +YF++  ++ P       + L  A   Y+  +  +A ++ ++ 
Sbjct: 508 YDLGYAYFKSKKFAQAQKYFSEYLKN-PKTEFKNDAELRLADTYYADNQLNEAIAIYDK- 565

Query: 121 ITQYPESKNVD-YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
                 ++N D Y  +   M+              T+  +  +  ++ +Y +S Y   A 
Sbjct: 566 ------TENADDYTLFQKAMALGFK--------GDTEAKISSLKSLLSKYKSSEYADDAL 611

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                          EIG  Y    ++  A   F  V+ + SD +    A     + Y+ 
Sbjct: 612 --------------YEIGTAYAANEDFTNANDYFSQVIKSSSDQDLVANAQIYRAQNYID 657

Query: 240 LALMDEAREVVSLIQERYPQGYWARYV 266
           L   ++A      +  +Y    +A  V
Sbjct: 658 LNQNEKALTEFRALANQYKNTSYAAKV 684



 Score = 42.4 bits (99), Expect = 0.061,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 68/211 (32%), Gaps = 40/211 (18%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
                 + NF  A +YF +            ++    A   Y  G Y  A    E  +  
Sbjct: 439 GTEEFNKGNFDAAEKYFLRSLEFNINKEFNTRATYWLAQTYYQKGNYPSAIVRYERIL-- 496

Query: 124 YPESKNVDYVY---YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
              ++N        Y +G +Y +         +      +Y S  ++    + +   A  
Sbjct: 497 ---NENFAEKQQLTYDLGYAYFKS--------KKFAQAQKYFSEYLKN-PKTEFKNDAEL 544

Query: 181 YVT---VGRNQLAAKEVEIGRY-----------YLK------RGEYVAAIPRFQLVLANY 220
            +       NQL      I  Y           + K      +G+  A I   + +L+ Y
Sbjct: 545 RLADTYYADNQLNE---AIAIYDKTENADDYTLFQKAMALGFKGDTEAKISSLKSLLSKY 601

Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVS 251
             +E+A++A+  +  AY A      A +  S
Sbjct: 602 KSSEYADDALYEIGTAYAANEDFTNANDYFS 632



 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 29/226 (12%), Positives = 65/226 (28%), Gaps = 33/226 (14%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           T+      +++KA+    + +              +  +  A  +L        +   + 
Sbjct: 566 TENADDYTLFQKAMALGFKGDTEAKISSLKSLLSKYKSSEYADDALYEIGTAYAANEDFT 625

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            A     + I    +   V         +Y  + ++        +  L     +  +Y N
Sbjct: 626 NANDYFSQVIKSSSDQDLVANAQIYRAQNYIDLNQN--------EKALTEFRALANQYKN 677

Query: 172 SPYVKGARF--YVTVGR-NQLAAKE-------------------VEIGRYYLKRGEYVAA 209
           + Y             + N +A  +                   +   R Y    +Y  A
Sbjct: 678 TSYAAKVVQAARPAFMKTNDIAGYQSFAQSAGVKLDASELDEINLSSARNYYASKDYKNA 737

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           IP ++  L      +   +A   L E+Y        A + + ++QE
Sbjct: 738 IPLYEKYLTQNPTGDGLFQAQYELGESYYQ---SKNAAKSLLVLQE 780



 Score = 40.1 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 48/266 (18%), Positives = 88/266 (33%), Gaps = 58/266 (21%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL----- 97
           S+ +   S  D+    ++Y +A  ++      KA   F   +  +     A K +     
Sbjct: 632 SQVIKSSSDQDLVANAQIY-RAQNYIDLNQNEKALTEFRALANQYKNTSYAAKVVQAARP 690

Query: 98  -------------------------------LMSAFVQYSAGKYQQAASLGEEYITQYPE 126
                                          L SA   Y++  Y+ A  L E+Y+TQ P 
Sbjct: 691 AFMKTNDIAGYQSFAQSAGVKLDASELDEINLSSARNYYASKDYKNAIPLYEKYLTQNPT 750

Query: 127 SKNVDYVYYLVGMSYAQM---------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
              +    Y +G SY Q          +++V   Q   +   Q  +RI + Y        
Sbjct: 751 GDGLFQAQYELGESYYQSKNAAKSLLVLQEVAGVQNDYQQDAQ--TRIAQIYLEQNNTNE 808

Query: 178 ARFYVTVGRNQ-------LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH-AEEA 229
           A+ Y+    N         A  E+   + Y     +  A     LVL+N  ++    E+A
Sbjct: 809 AKKYLEPLANSANVNVKNFANLELM--KIYADEKNFAQAEKFADLVLSNSKNSPSITEQA 866

Query: 230 MARLVEAYVALALMDEAREVVSLIQE 255
                 + +      EA+   + +++
Sbjct: 867 KVIKARSLMNKGRDTEAKTAYAALEK 892


>gi|254694355|ref|ZP_05156183.1| TPR repeat-containing protein [Brucella abortus bv. 3 str. Tulya]
          Length = 484

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 53/136 (38%), Gaps = 8/136 (5%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
            G +   + +  + S+        +Y+ A  +L   ++  A   F +  + +P   +  +
Sbjct: 339 GGIQTGGAANDAVASLPTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAE 398

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +        Y  G+Y +AA+L  +    YP+SK      + +GM+  +M           
Sbjct: 399 ARFWLGESLYGQGRYPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNH-------- 450

Query: 156 KLMLQYMSRIVERYTN 171
            +     ++I +RY  
Sbjct: 451 DVACATFAQIPQRYPK 466



 Score = 44.0 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 8/104 (7%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           SL  +A+    +G Y+ A +   E++ +YP         + +G S     R         
Sbjct: 362 SLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYP------- 414

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
                        Y +S       F + +   ++   +V    +
Sbjct: 415 -EAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATF 457



 Score = 39.7 bits (92), Expect = 0.48,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 14/107 (13%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         V+RY   P    ARF++                    +G Y  A   
Sbjct: 374 GDYKAAEAGFREHVKRYPADPMTAEARFWLGESL--------------YGQGRYPEAATL 419

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           F     +Y D++ A E M +L  A   +   D A    + I +RYP+
Sbjct: 420 FIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYPK 466



 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 23/68 (33%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +    YL  G+Y AA   F+  +  Y       EA   L E+        EA  +    
Sbjct: 364 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 423

Query: 254 QERYPQGY 261
           Q  YP   
Sbjct: 424 QRDYPDSK 431


>gi|78065361|ref|YP_368130.1| hypothetical protein Bcep18194_A3887 [Burkholderia sp. 383]
 gi|77966106|gb|ABB07486.1| conserved hypothetical protein [Burkholderia sp. 383]
          Length = 249

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/137 (13%), Positives = 45/137 (32%), Gaps = 8/137 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
             T    + +    A    +  NF  A   F      +P +     +       QY+   
Sbjct: 121 EGTVQPGETDALSAAQQQFRNGNFKAAAASFRAFIAKYPQSPYQPTAQYWYGNAQYALRD 180

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y+ + +  +  ++++P+          +G         +   Q+A     +   ++V +Y
Sbjct: 181 YRGSTATWQGIVSKFPQHPRAADALVAIG------TNQLEQGQKAA--AKKTFEQVVSQY 232

Query: 170 TNSPYVKGARFYVTVGR 186
             S   + A+  +   +
Sbjct: 233 AGSNAAQTAQGKLETIK 249



 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/109 (12%), Positives = 36/109 (33%), Gaps = 14/109 (12%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         + +Y  SPY   A+++                +Y L+  +Y  +   
Sbjct: 142 GNFKAAAASFRAFIAKYPQSPYQPTAQYW------------YGNAQYALR--DYRGSTAT 187

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +Q +++ +     A +A+  +    +       A++    +  +Y    
Sbjct: 188 WQGIVSKFPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYAGSN 236


>gi|323697640|ref|ZP_08109552.1| tol-pal system protein YbgF [Desulfovibrio sp. ND132]
 gi|323457572|gb|EGB13437.1| tol-pal system protein YbgF [Desulfovibrio desulfuricans ND132]
          Length = 318

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 40/113 (35%), Gaps = 8/113 (7%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +YEK         F  A + F+     +P   +   +L       YS   Y QA    +E
Sbjct: 199 LYEKGYAQYNAGAFPAARQTFDDFLARYPKNDLTPNALYWKGETYYSEQDYAQAILAFKE 258

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
              ++P+          +GMSY     D   D       + Y+  +VE +  S
Sbjct: 259 VTGRFPKHDKAAAALLKIGMSY-----DRVGDPDN---AIFYLRALVEDFPKS 303



 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 44/129 (34%), Gaps = 22/129 (17%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +L    + QY+AG +  A    ++++ +YP++       Y  G +Y          ++  
Sbjct: 198 ALYEKGYAQYNAGAFPAARQTFDDFLARYPKNDLTPNALYWKGETYYS--------EQDY 249

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
              +     +  R+        A                 IG  Y + G+   AI   + 
Sbjct: 250 AQAILAFKEVTGRFPKHDKAAAALLK--------------IGMSYDRVGDPDNAIFYLRA 295

Query: 216 VLANYSDAE 224
           ++ ++  + 
Sbjct: 296 LVEDFPKSS 304



 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 39/129 (30%), Gaps = 22/129 (17%)

Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
             Y  G +             A     Q     + RY  +     A ++           
Sbjct: 198 ALYEKGYAQYNA--------GAFPAARQTFDDFLARYPKNDLTPNALYWK---------- 239

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
               G  Y    +Y  AI  F+ V   +   + A  A+ ++  +Y  +   D A   +  
Sbjct: 240 ----GETYYSEQDYAQAILAFKEVTGRFPKHDKAAAALLKIGMSYDRVGDPDNAIFYLRA 295

Query: 253 IQERYPQGY 261
           + E +P+  
Sbjct: 296 LVEDFPKSS 304



 Score = 44.0 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 32/92 (34%), Gaps = 4/92 (4%)

Query: 33  CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
                  RQ+  D       +      +Y K   +  EQ++++A   F + +  FP    
Sbjct: 209 AGAFPAARQTFDDFLARYPKNDLTPNALYWKGETYYSEQDYAQAILAFKEVTGRFPKHDK 268

Query: 93  ARKSLLMSAFVQYSAGKYQQAA----SLGEEY 120
           A  +LL         G    A     +L E++
Sbjct: 269 AAAALLKIGMSYDRVGDPDNAIFYLRALVEDF 300


>gi|332878926|ref|ZP_08446641.1| putative tol-pal system protein YbgF [Capnocytophaga sp. oral taxon
           329 str. F0087]
 gi|332683277|gb|EGJ56159.1| putative tol-pal system protein YbgF [Capnocytophaga sp. oral taxon
           329 str. F0087]
          Length = 1000

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 73/214 (34%), Gaps = 25/214 (11%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYS 106
             +     Y +  Y  A     ++++++A   F +  +  P        ++L  A   + 
Sbjct: 489 PSASKTDEYPKAFYGLAYANFNQRHYAEAIVNFEKYLKQNPKDEDFKHDAMLRLADSYFV 548

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
            GKY  A     + I    +S + DY  Y   +SY  + R            ++ + R +
Sbjct: 549 TGKYWPAMEGYNKLIES--KSADQDYAAYQKAISYGFVDRPNNK--------IEDLERFI 598

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
           + Y  S     A              E+  G  Y+ +G+    +  +Q +  +Y      
Sbjct: 599 KNYPTSNLRPNAL------------YEL--GNTYVTQGDTDKGLQYYQQLAKDYKGNALV 644

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
             AM R    Y       +A  +   I + YP+ 
Sbjct: 645 PRAMLREGLVYYNRGENQKALSLFKAIAKDYPKT 678



 Score = 39.3 bits (91), Expect = 0.54,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 28/69 (40%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
            VTD+  +   YE A   L + N  +A   F +  + FP       +    A   Y+ GK
Sbjct: 712 EVTDLELESATYEAAERQLLQNNNKEAIVAFEKYLQQFPNGMRRTNAEFYLAQALYNTGK 771

Query: 110 YQQAASLGE 118
             +A +  E
Sbjct: 772 KAEALTHYE 780



 Score = 38.9 bits (90), Expect = 0.84,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 58/164 (35%), Gaps = 29/164 (17%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
            T       +YE    ++ + +  K  +Y+ Q ++D+    +  +++L    V Y+ G+ 
Sbjct: 602 PTSNLRPNALYELGNTYVTQGDTDKGLQYYQQLAKDYKGNALVPRAMLREGLVYYNRGEN 661

Query: 111 QQAASLGEEYITQYPESKNV------------------DYVYYLVGMSYAQMIR------ 146
           Q+A SL +     YP++                     DY  +   + Y ++        
Sbjct: 662 QKALSLFKAIAKDYPKTTEASQAVSSAKLIYVDMGQVNDYAAWAKSLGYVEVTDLELESA 721

Query: 147 -----DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
                +    Q   K  +    + ++++ N      A FY+   
Sbjct: 722 TYEAAERQLLQNNNKEAIVAFEKYLQQFPNGMRRTNAEFYLAQA 765



 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 52/193 (26%), Gaps = 31/193 (16%)

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            E   +  +++P + +   +L        + G   +     ++    Y  +  V      
Sbjct: 591 IEDLERFIKNYPTSNLRPNALYELGNTYVTQGDTDKGLQYYQQLAKDYKGNALVPRAMLR 650

Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA--RFYVTVG----RNQLA 190
            G+ Y              +  L     I + Y  +     A     +        N  A
Sbjct: 651 EGLVYYNR--------GENQKALSLFKAIAKDYPKTTEASQAVSSAKLIYVDMGQVNDYA 702

Query: 191 AKE-----VEIGRYYLKRGEYVAA------------IPRFQLVLANYSDAEHAEEAMARL 233
           A       VE+    L+   Y AA            I  F+  L  + +      A   L
Sbjct: 703 AWAKSLGYVEVTDLELESATYEAAERQLLQNNNKEAIVAFEKYLQQFPNGMRRTNAEFYL 762

Query: 234 VEAYVALALMDEA 246
            +A        EA
Sbjct: 763 AQALYNTGKKAEA 775



 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 41/247 (16%), Positives = 79/247 (31%), Gaps = 53/247 (21%)

Query: 50  SVTDVRYQREVYEK-----AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
             +     RE+Y+K      V    E  ++ A  Y ++   D   + +A ++   +A   
Sbjct: 412 EKSSDPKDRELYKKVAFYRGVELFNELQYADALTYLDKAIADN--SAIAARAAYWAAEAA 469

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
           Y    Y +AA+  +++      SK  +Y   +Y  G++YA       ++QR     +   
Sbjct: 470 YQLKNYPKAATYFQQFFANPSASKTDEYPKAFY--GLAYAN------FNQRHYAEAIVNF 521

Query: 163 SRIVERYTNSPYVK-GARFYVTVGRNQLAAKEVEIGRYYLKRG----------------E 205
            + +++       K  A          LA      G+Y+                     
Sbjct: 522 EKYLKQNPKDEDFKHDAMLR-------LADSYFVTGKYWPAMEGYNKLIESKSADQDYAA 574

Query: 206 YVAAIPR------------FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           Y  AI               +  + NY  +     A+  L   YV     D+  +    +
Sbjct: 575 YQKAISYGFVDRPNNKIEDLERFIKNYPTSNLRPNALYELGNTYVTQGDTDKGLQYYQQL 634

Query: 254 QERYPQG 260
            + Y   
Sbjct: 635 AKDYKGN 641


>gi|319900806|ref|YP_004160534.1| Tetratricopeptide TPR_1 repeat-containing protein [Bacteroides
           helcogenes P 36-108]
 gi|319415837|gb|ADV42948.1| Tetratricopeptide TPR_1 repeat-containing protein [Bacteroides
           helcogenes P 36-108]
          Length = 1010

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 33/80 (41%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
            +       +YEK   +++  N  +A   F +    +P +  +RK+      + Y    Y
Sbjct: 622 PSSPYAVNALYEKGRSYVQSNNSHQAIAAFRELLSKYPESPASRKAAAEIGLLYYQNNDY 681

Query: 111 QQAASLGEEYITQYPESKNV 130
            +A    +  ITQYP S+  
Sbjct: 682 DRAIEAYKHVITQYPGSEEA 701



 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 46/125 (36%), Gaps = 8/125 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A++   +++++      N+ +  +P +  A  +L         +    QA +   E 
Sbjct: 595 YQLALVAGLQKDYNGKISLLNRLANKYPSSPYAVNALYEKGRSYVQSNNSHQAIAAFREL 654

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +++YPES         +G+ Y     D           ++    ++ +Y  S   + A  
Sbjct: 655 LSKYPESPASRKAAAEIGLLYY-QNNDYDR-------AIEAYKHVITQYPGSEEARLAMR 706

Query: 181 YVTVG 185
            +   
Sbjct: 707 DLKSI 711



 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 79/249 (31%), Gaps = 51/249 (20%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQC-----SRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
              +Y       +     +A  YFN+       R+     +   +    A++ ++   Y 
Sbjct: 478 ADALYWLGESCYRLNRMREAARYFNEYLTLTGERN---TEMFALAYYNLAYIAFNQKDYS 534

Query: 112 QAASLGEEYITQ----YPES---------------KNVDYV--YYLVGMS--------YA 142
            A      +I       P +               +  D    YY    S          
Sbjct: 535 TAEGYFRSFIQLEKGKNPTALADACNRIGDCNLHVRRFDEAKRYYTKAESLGTPAGDYSF 594

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
             +  V   Q+     +  ++R+  +Y +SPY            N L  K    GR Y++
Sbjct: 595 YQLALVAGLQKDYNGKISLLNRLANKYPSSPYA----------VNALYEK----GRSYVQ 640

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
                 AI  F+ +L+ Y ++  + +A A +   Y      D A E    +  +YP    
Sbjct: 641 SNNSHQAIAAFRELLSKYPESPASRKAAAEIGLLYYQNNDYDRAIEAYKHVITQYPGSEE 700

Query: 263 ARYVETLVK 271
           AR     +K
Sbjct: 701 ARLAMRDLK 709



 Score = 43.6 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 39/285 (13%), Positives = 79/285 (27%), Gaps = 68/285 (23%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           +K +  +  +I    L+   + S ++            + +Y++     +++ +S A   
Sbjct: 3   HKISRILCTAICCAPLLATAQTSEKNT---------SAQRLYQEGQSLFQQKAYSAAISP 53

Query: 80  FNQCSRD-------FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
                R         P  G  +++  M A   Y      Q+      ++ +YP++ + + 
Sbjct: 54  LQTYIRQTDAKGKPLPATGERQEAEYMLACTSYELRN-PQSMERLRTFLEEYPDTPHANR 112

Query: 133 VYYLVGMSYA-----------------QMIRDVPYDQ------------RATKLMLQYMS 163
           +Y L+   Y                   ++     D                K    +  
Sbjct: 113 IYALIASIYFFEAKYDDALAMFNSSRLDLLDSEERDDMTYRLATCYLKTGNAKEAAIWFE 172

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKE--------------------VEIGRYYLKR 203
            +  R T   Y     +Y++  R      E                      I   YL +
Sbjct: 173 TL--RSTGRKYTADCNYYISYIRYIQGRHEEALSGFLPLQDNNKYKALVPYYIAEIYLIK 230

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
             Y  A    Q  L+ +    +  E    L  A        EA  
Sbjct: 231 KNYDKAEIVAQNYLSAHPGQTYTAEMYRVLGTAEYHSGKFHEAMT 275



 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 67/192 (34%), Gaps = 41/192 (21%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
           Y +S    +   E+    +L+ +  ++ +A E +      +P +  AR ++     +   
Sbjct: 658 YPESPASRKAAAEI---GLLYYQNNDYDRAIEAYKHVITQYPGSEEARLAMRDLKSIYVD 714

Query: 107 AGKYQQAASLGEEY---ITQYPESKN-----VDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
           A +  + A+L  +    I   P  ++          Y+ G                    
Sbjct: 715 ANRIDEFAALASQMPGEIRFDPSEQDSLTYMAAEKIYMKG---------------EASSA 759

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
              ++R ++ + N  +   A +Y+ +       KE         + +  A +     +L 
Sbjct: 760 KNSLTRYLQNFPNGSFSLNAHYYLCII-----GKE---------QKDDEAVLEHAGKLLE 805

Query: 219 NYSDAEHAEEAM 230
            Y D  ++EEA+
Sbjct: 806 -YPDNTYSEEAL 816



 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 79/210 (37%), Gaps = 15/210 (7%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A ++L ++N+ KA           P      +   +    +Y +GK+ +A +  ++Y
Sbjct: 221 YYIAEIYLIKKNYDKAEIVAQNYLSAHPGQTYTAEMYRVLGTAEYHSGKFHEAMTSFDKY 280

Query: 121 ITQYPESKNVDYVYYLVGMSYAQ-----MIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
           +    E+ +     Y+ G+S  Q      +  +  +  + K  L   + +          
Sbjct: 281 LEYGTEAIHRRDALYMSGISCYQCGVYSKVPAILGEVTSEKDALSQNAYLHMGLAYLQLA 340

Query: 176 KGARFYVTVGRNQLAAKEVEI---GRYYL----KRGEYVA---AIPRFQLVLANYSDAEH 225
             A+  +   +   +  +++I     Y          Y A   ++  F+  L  + ++ +
Sbjct: 341 DKAKARMAFEQAAASNSDLKIKEQASYNYALCIHETAYSAFGESVTVFEKFLNEFPNSPY 400

Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQE 255
           A++  + LVE Y+     D A + +  I  
Sbjct: 401 ADKVGSYLVEVYMNTRSYDAALKSIERITH 430


>gi|50120314|ref|YP_049481.1| tol-pal system protein YbgF [Pectobacterium atrosepticum SCRI1043]
 gi|49610840|emb|CAG74285.1| putative exported protein [Pectobacterium atrosepticum SCRI1043]
          Length = 258

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 45/135 (33%), Gaps = 9/135 (6%)

Query: 50  SVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           +          Y  A    L+++ + +A   F    + +P +     +      + Y+ G
Sbjct: 130 APASTGDANSDYNAAAALVLEKKQYDQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKG 189

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           K   AA      +  YP+S         VG+        +  ++           ++V+ 
Sbjct: 190 KKDDAAYYFANVVKNYPKSPKSSEALLKVGV--------IMQEKGQADKAKAVYQQVVKM 241

Query: 169 YTNSPYVKGARFYVT 183
           Y N+   K A+  + 
Sbjct: 242 YPNTESAKQAQKRLA 256



 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             S       +  +++     +      V++Y +S Y   A +++               
Sbjct: 137 ANSDYNAAAALVLEKKQYDQAISAFQAFVKKYPDSTYQPNANYWLGQLN----------- 185

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
                +G+   A   F  V+ NY  +  + EA+ ++          D+A+ V   + + Y
Sbjct: 186 ---YNKGKKDDAAYYFANVVKNYPKSPKSSEALLKVGVIMQEKGQADKAKAVYQQVVKMY 242

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 243 PNTESAKQAQK 253



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 46/127 (36%), Gaps = 22/127 (17%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +Y QA S  + ++ +YP+S       Y +G       +              Y + +V+
Sbjct: 152 KQYDQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYFANVVK 203

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y  SP    A   V V                 ++G+   A   +Q V+  Y + E A+
Sbjct: 204 NYPKSPKSSEALLKVGVIMQ--------------EKGQADKAKAVYQQVVKMYPNTESAK 249

Query: 228 EAMARLV 234
           +A  RL 
Sbjct: 250 QAQKRLA 256



 Score = 43.6 bits (102), Expect = 0.034,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 2/71 (2%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           L++ +Y  AI  FQ  +  Y D+ +   A   L +        D+A    + + + YP+ 
Sbjct: 149 LEKKQYDQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFANVVKNYPKS 208

Query: 261 YWARYVETLVK 271
              +  E L+K
Sbjct: 209 --PKSSEALLK 217


>gi|161504088|ref|YP_001571200.1| tol-pal system protein YbgF [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|160865435|gb|ABX22058.1| hypothetical protein SARI_02186 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 262

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 47/156 (30%), Gaps = 9/156 (5%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89
           +           +      +          Y  A+  +++++    A   F    + +P 
Sbjct: 115 SGAATAASPAPDAGTATSGAPVQSGDANTDYNAAIALVQDKSRQDDAIVAFQNFIKKYPD 174

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +     +      + Y+ GK   AA      +  YP+S       Y VG+        + 
Sbjct: 175 STYQPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGV--------IM 226

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            D+           +++ +Y  +   K A+  +   
Sbjct: 227 QDKGDMAKAKAVYQQVINKYPGTDGAKQAQKRLNAM 262



 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 44/131 (33%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      +++Y +S Y   A +++               
Sbjct: 141 ANTDYNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLN----------- 189

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
                +G+   A   F  V+ NY  +  A +AM ++         M +A+ V   +  +Y
Sbjct: 190 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDMAKAKAVYQQVINKY 246

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 247 PGTDGAKQAQK 257



 Score = 49.0 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I +YP+S       Y +G       +              Y + +V+ Y 
Sbjct: 159 DDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 210

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A + V V                  +G+   A   +Q V+  Y   + A++A 
Sbjct: 211 KSPKAADAMYKVGVIMQ--------------DKGDMAKAKAVYQQVINKYPGTDGAKQAQ 256

Query: 231 ARL 233
            RL
Sbjct: 257 KRL 259


>gi|157146632|ref|YP_001453950.1| tol-pal system protein YbgF [Citrobacter koseri ATCC BAA-895]
 gi|157083837|gb|ABV13515.1| hypothetical protein CKO_02398 [Citrobacter koseri ATCC BAA-895]
          Length = 262

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 44/126 (34%), Gaps = 9/126 (7%)

Query: 61  YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A+  +++++    A   F    + +P +     +      + Y+ GK   AA     
Sbjct: 145 YNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDDAAFYFAS 204

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       Y VG+        +  D+           +++ +Y  +   K A+
Sbjct: 205 VVKNYPKSPKAADAMYKVGV--------IMQDKGDAAKAKAVYQQVISKYPGTDGAKQAQ 256

Query: 180 FYVTVG 185
             +   
Sbjct: 257 KRLNAM 262



 Score = 50.1 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 44/131 (33%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      +++Y +S Y   A +++               
Sbjct: 141 ANTDYNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLN----------- 189

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
             Y K  +  AA   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 190 --YNKGKKDDAAFY-FASVVKNYPKSPKAADAMYKVGVIMQDKGDAAKAKAVYQQVISKY 246

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 247 PGTDGAKQAQK 257



 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 40/123 (32%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I +YP+S       Y +G       +              Y + +V+ Y 
Sbjct: 159 DDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAFYFASVVKNYP 210

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A + V V                 K     A    +Q V++ Y   + A++A 
Sbjct: 211 KSPKAADAMYKVGVIMQ-------------DKGDAAKAKAV-YQQVISKYPGTDGAKQAQ 256

Query: 231 ARL 233
            RL
Sbjct: 257 KRL 259


>gi|299529323|ref|ZP_07042762.1| hypothetical protein CTS44_01083 [Comamonas testosteroni S44]
 gi|298722701|gb|EFI63619.1| hypothetical protein CTS44_01083 [Comamonas testosteroni S44]
          Length = 253

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 49/137 (35%), Gaps = 8/137 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
             T  R +++ +E+A+   +   F +A + F    R +P +G            QY+   
Sbjct: 125 EFTADRNEQQEFEQALGMFRSGKFPEAGQAFAAFLRQWPKSGYTPSVRFWLGNSQYATRD 184

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y+ A +     +T  P           +     ++        + TK   + +  +++ Y
Sbjct: 185 YKNAIANFRSVMTNAPMHARAPEAALSIANCLVEL--------KDTKAARKTLEELLQAY 236

Query: 170 TNSPYVKGARFYVTVGR 186
            NS     A+  +   +
Sbjct: 237 PNSEAAGIAKSKLATLK 253



 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 36/105 (34%), Gaps = 14/105 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              Q  +  + ++  S Y    RF++   +             Y  R  Y  AI  F+ V
Sbjct: 150 EAGQAFAAFLRQWPKSGYTPSVRFWLGNSQ-------------YATRD-YKNAIANFRSV 195

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           + N      A EA   +    V L     AR+ +  + + YP   
Sbjct: 196 MTNAPMHARAPEAALSIANCLVELKDTKAARKTLEELLQAYPNSE 240



 Score = 35.5 bits (81), Expect = 7.4,   Method: Composition-based stats.
 Identities = 20/133 (15%), Positives = 41/133 (30%), Gaps = 22/133 (16%)

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
            +     A   + +GK+ +A      ++ Q+P+S     V + +G S          D  
Sbjct: 132 EQQEFEQALGMFRSGKFPEAGQAFAAFLRQWPKSGYTPSVRFWLGNSQY-----ATRD-- 184

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
             K  +     ++           A   +     +L               +  AA    
Sbjct: 185 -YKNAIANFRSVMTNAPMHARAPEAALSIANCLVEL--------------KDTKAARKTL 229

Query: 214 QLVLANYSDAEHA 226
           + +L  Y ++E A
Sbjct: 230 EELLQAYPNSEAA 242


>gi|164688410|ref|ZP_02212438.1| hypothetical protein CLOBAR_02055 [Clostridium bartlettii DSM
           16795]
 gi|164602823|gb|EDQ96288.1| hypothetical protein CLOBAR_02055 [Clostridium bartlettii DSM
           16795]
          Length = 478

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 46/135 (34%), Gaps = 15/135 (11%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMS 100
           ++   ++    +    +Y  A  + +  ++  A +Y+    + +  +        ++   
Sbjct: 343 KEQEKEATEIAKGAENLYFSANKYKQAGDYKTAIKYYEYSLKANDTY---KFREDAIYNM 399

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNV-DYVYYLVGMSYAQMIRDVPYDQRATKLML 159
           A      G    A    ++++  Y  S N  D  YY +GM Y +  R         +   
Sbjct: 400 ALSYQKLGDDDNAIKYYKKFVNTYKASSNFYDDSYYHLGMLYYKNDR--------LQDAK 451

Query: 160 QYMSRIVERYTNSPY 174
                +     NSPY
Sbjct: 452 NAFYDLRGSDPNSPY 466



 Score = 42.4 bits (99), Expect = 0.075,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 25/79 (31%), Gaps = 1/79 (1%)

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           A         Y + G+Y  AI  ++  L      +  E+A+  +  +Y  L   D A + 
Sbjct: 356 AENLYFSANKYKQAGDYKTAIKYYEYSLKANDTYKFREDAIYNMALSYQKLGDDDNAIKY 415

Query: 250 VSLIQERYP-QGYWARYVE 267
                  Y     +     
Sbjct: 416 YKKFVNTYKASSNFYDDSY 434


>gi|228474051|ref|ZP_04058792.1| TPR repeat protein [Capnocytophaga gingivalis ATCC 33624]
 gi|228274565|gb|EEK13406.1| TPR repeat protein [Capnocytophaga gingivalis ATCC 33624]
          Length = 996

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 76/214 (35%), Gaps = 24/214 (11%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           L   T   Y   +Y        ++ + +A EYF++  +  P A     + L      ++A
Sbjct: 489 LKETTLAEYPNALYGLGYALFNQKKYVEAAEYFSKYIQTQPEASRLADANLRLGDSYFAA 548

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           GKY  A    ++ IT      N DY  +   +SY      V    +     ++ ++  + 
Sbjct: 549 GKYWPAMEAYDKVITAN--VSNTDYAAFQKAISYGI----VDRVPKK----IEALNAFIT 598

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y  S   + A              E+     Y+ +G+   A   ++++ + Y +  +  
Sbjct: 599 HYPKSNLREDAI------------YEL--ANTYVGQGKMEKASELYEMLQSQYQEGTYTA 644

Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            AM R            +A  +   I ++YP   
Sbjct: 645 RAMLREGLMLYNKNENQKALAIFKKITQKYPSSP 678



 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 39/253 (15%), Positives = 78/253 (30%), Gaps = 61/253 (24%)

Query: 54  VRYQREVYEK-----AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
                ++Y++     A+    + NF +A  YF +       + V  ++   S    Y   
Sbjct: 415 TSPDPKIYQQVAFLYALQLYGDGNFKEALPYFQKAKNSKAQSQVQARATYWSGETHYQLH 474

Query: 109 KYQQAASLGEEYITQ-------YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           +Y +A      ++         YP         Y +G +     + V           +Y
Sbjct: 475 EYPEAQRDFSAFLALKETTLAEYPN------ALYGLGYALFNQKKYV--------EAAEY 520

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV------------AA 209
            S+ ++    +  +  A          L       G+Y+     Y             AA
Sbjct: 521 FSKYIQTQPEASRLADANLR-------LGDSYFAAGKYWPAMEAYDKVITANVSNTDYAA 573

Query: 210 ----------------IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
                           I      + +Y  +   E+A+  L   YV    M++A E+  ++
Sbjct: 574 FQKAISYGIVDRVPKKIEALNAFITHYPKSNLREDAIYELANTYVGQGKMEKASELYEML 633

Query: 254 QERYPQGYWARYV 266
           Q +Y +G +    
Sbjct: 634 QSQYQEGTYTARA 646



 Score = 44.7 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 82/234 (35%), Gaps = 47/234 (20%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                 +  +YE A  ++ +    KA E +      +       +++L    + Y+  + 
Sbjct: 601 PKSNLREDAIYELANTYVGQGKMEKASELYEMLQSQYQEGTYTARAMLREGLMLYNKNEN 660

Query: 111 QQAASLGEEYITQYPESKNV------------------DYVYYLVGMSYAQ----MIRDV 148
           Q+A ++ ++   +YP S                     +Y  +   + Y +     I   
Sbjct: 661 QKALAIFKKITQKYPSSPEAMQAVSSAKNIYAEMGKMEEYAAWAKALGYVKVSDSEIDSA 720

Query: 149 PYD-------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            +D       Q   +     + + ++ Y        A              E  + + Y 
Sbjct: 721 AFDAAERLYVQNKKQEAKVALEKYLKDYPKGTGASQA--------------EFYLAQIYF 766

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
              +   A+P ++ VLA   + E++E+ + RL   Y+     ++  +V+ L++E
Sbjct: 767 DENQKDKALPLYEKVLAQGRN-EYSEQVLVRLSNIYLE---KEDTDKVLPLLEE 816



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 53/183 (28%), Gaps = 26/183 (14%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              +   + ++KA  Y                 L    F  Y  G YQ+A       I  
Sbjct: 251 GESYFNLKQYTKAIPYLEAYKGKN--GTYTDTDLYYLGFAYYQQGDYQKAIGQFNRII-- 306

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
             +++     YY +   Y +  +         +  L       +   +S   K A     
Sbjct: 307 NGKNQVAQNAYYHLAQCYLKTGQK--------QQALNAFRNAYQMNFSSEIKKDAHLNY- 357

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
                 A    E+G        Y +     Q  +  Y + +H +E    L+++Y+     
Sbjct: 358 ------ARLSYEVG------NAYESTPTVIQAYIDTYPN-DHTQELKELLLDSYITSGNF 404

Query: 244 DEA 246
             A
Sbjct: 405 PSA 407


>gi|71901733|ref|ZP_00683805.1| TPR repeat [Xylella fastidiosa Ann-1]
 gi|71728505|gb|EAO30664.1| TPR repeat [Xylella fastidiosa Ann-1]
          Length = 271

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 49/154 (31%), Gaps = 10/154 (6%)

Query: 39  ERQSSRDVYLDSVTDVRYQRE--VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
             + S +V+ D+        E   Y  A   LK   ++ A E F    + +P       +
Sbjct: 124 MSEQSPNVHGDASALTISNEERIAYNVAFDALKNSKYADAAELFMSFLKLYPNGVYTPNA 183

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
           L       Y+   +  A +     +++YP             +  A   ++         
Sbjct: 184 LYWLGESYYAMHDFVSAEAQFRTLLSRYPTHDKASGSLLKEALCQANQGKN--------D 235

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
                + +++ +Y  +   + A+  +   +   A
Sbjct: 236 AAQHSLEQVLSQYPGTDAARLAQERLQSMKLSQA 269



 Score = 42.0 bits (98), Expect = 0.091,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 42/115 (36%), Gaps = 14/115 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              +     ++ Y N  Y   A +++              G  Y    ++V+A  +F+ +
Sbjct: 162 DAAELFMSFLKLYPNGVYTPNALYWL--------------GESYYAMHDFVSAEAQFRTL 207

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           L+ Y   + A  ++ +           D A+  +  +  +YP    AR  +  ++
Sbjct: 208 LSRYPTHDKASGSLLKEALCQANQGKNDAAQHSLEQVLSQYPGTDAARLAQERLQ 262



 Score = 40.5 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 23/58 (39%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           LK  +Y  A   F   L  Y +  +   A+  L E+Y A+     A      +  RYP
Sbjct: 155 LKNSKYADAAELFMSFLKLYPNGVYTPNALYWLGESYYAMHDFVSAEAQFRTLLSRYP 212


>gi|322379083|ref|ZP_08053486.1| competence lipoprotein [Helicobacter suis HS1]
 gi|322379947|ref|ZP_08054224.1| competence lipoprotein [Helicobacter suis HS5]
 gi|321147645|gb|EFX42268.1| competence lipoprotein [Helicobacter suis HS5]
 gi|321148575|gb|EFX43072.1| competence lipoprotein [Helicobacter suis HS1]
          Length = 213

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 57/153 (37%), Gaps = 7/153 (4%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           N   A  Y++    +   + +   +++          ++  A    +EYI ++    N+D
Sbjct: 45  NLETADNYYSSLQSEHINSPLVPDAMIALGQAHLKKKEFVLAEYYFDEYIKRFGNQSNID 104

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
           Y+ +L   +     ++   DQ      L  ++  V++Y +S ++    +     +  L  
Sbjct: 105 YLKFLKLQARYYAFKNHSKDQEFMSNTLGMLNDFVDKYPHSRFLNQVEYM--QVKFILGQ 162

Query: 192 KEVE--IGRYYLKRGEYVAA---IPRFQLVLAN 219
            E+   I   Y KR +       + R   VL  
Sbjct: 163 NELNRAIANVYRKRHQKEGVKRYMERVDEVLEK 195


>gi|254496227|ref|ZP_05109121.1| outer membrane protein [Legionella drancourtii LLAP12]
 gi|254354532|gb|EET13173.1| outer membrane protein [Legionella drancourtii LLAP12]
          Length = 319

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 63/150 (42%), Gaps = 25/150 (16%)

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              P  + + Y      ++  +++++  YD       L  M+  V++Y    Y   A+++
Sbjct: 193 RTNPADEQISY------LAAYELVKNRRYD-----DALNSMNLFVQKYPRGGYTANAQYW 241

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
           +              G  YL + +Y  A+  F +VL  ++ +  +  +M ++  AY A+ 
Sbjct: 242 L--------------GELYLVKKDYAKAVEHFNVVLQQFATSSKSAASMLKVGYAYDAMG 287

Query: 242 LMDEAREVVSLIQERYPQGYWARYVETLVK 271
              EA++ +  +   YP    A+   + ++
Sbjct: 288 NKPEAKKYLQQVVRAYPGTPTAQLANSKLQ 317



 Score = 43.6 bits (102), Expect = 0.029,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 33/70 (47%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y    L+L +++++KA E+FN   + F  +  +  S+L   +   + G   +A    ++ 
Sbjct: 240 YWLGELYLVKKDYAKAVEHFNVVLQQFATSSKSAASMLKVGYAYDAMGNKPEAKKYLQQV 299

Query: 121 ITQYPESKNV 130
           +  YP +   
Sbjct: 300 VRAYPGTPTA 309



 Score = 38.6 bits (89), Expect = 0.89,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 42/134 (31%), Gaps = 8/134 (5%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           T+   ++  Y  A   +K + +  A    N   + +P  G    +      +      Y 
Sbjct: 194 TNPADEQISYLAAYELVKNRRYDDALNSMNLFVQKYPRGGYTANAQYWLGELYLVKKDYA 253

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           +A       + Q+  S         VG +Y  M               +Y+ ++V  Y  
Sbjct: 254 KAVEHFNVVLQQFATSSKSAASMLKVGYAYDAMGNKP--------EAKKYLQQVVRAYPG 305

Query: 172 SPYVKGARFYVTVG 185
           +P  + A   +   
Sbjct: 306 TPTAQLANSKLQTI 319


>gi|237748797|ref|ZP_04579277.1| tol-Pal cell envelope complex subunit YbgF [Oxalobacter formigenes
           OXCC13]
 gi|229380159|gb|EEO30250.1| tol-Pal cell envelope complex subunit YbgF [Oxalobacter formigenes
           OXCC13]
          Length = 244

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/137 (13%), Positives = 41/137 (29%), Gaps = 8/137 (5%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
              T    +   Y  A    K  ++  A   +N   + +P + +   +        Y  G
Sbjct: 116 KESTADSNENAAYATAEDKFKAGDYKGAVSAYNSFLKQYPKSNLIASAQYQLGNAYYLQG 175

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
            Y+ A       + +YP+++        +      +               + +S +  +
Sbjct: 176 DYKNALKQQSAVVKRYPKNQVTPDAMLNMASCQIGLNDIAG--------AKKTLSELARK 227

Query: 169 YTNSPYVKGARFYVTVG 185
           Y  S   K A+  +   
Sbjct: 228 YPKSGAAKKAKERLVQL 244



 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 51/120 (42%), Gaps = 15/120 (12%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K  +   +  +++Y  S              N +A+ + ++G  Y  +G+Y  A+ +
Sbjct: 138 GDYKGAVSAYNSFLKQYPKS--------------NLIASAQYQLGNAYYLQGDYKNALKQ 183

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV-ETLVK 271
              V+  Y   +   +AM  +    + L  +  A++ +S +  +YP+   A+   E LV+
Sbjct: 184 QSAVVKRYPKNQVTPDAMLNMASCQIGLNDIAGAKKTLSELARKYPKSGAAKKAKERLVQ 243


>gi|126662007|ref|ZP_01733006.1| TPR-domain containing protein [Flavobacteria bacterium BAL38]
 gi|126625386|gb|EAZ96075.1| TPR-domain containing protein [Flavobacteria bacterium BAL38]
          Length = 1003

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 68/208 (32%), Gaps = 37/208 (17%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK-------SLLMSAFVQYSAGKYQQA 113
           Y  A  + K + +  A EYF+       F+   +        + L      + A KY  A
Sbjct: 504 YNLAYSYFKLKEYESAIEYFDS------FSKSVKDDKIRLTDAYLRLGDCNFMAAKYWPA 557

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
                + I    +S + DY  +  G+SY   +             ++ + +  + Y  S 
Sbjct: 558 MDAYNKAIDM--KSVDADYAAFQKGISYG-FVSKPDRK-------IEDLEKFAKTYPTSQ 607

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
           Y   A              E+  G  Y+ + +    I  +  +++ Y  + +  +A+ + 
Sbjct: 608 YADDAL------------YEL--GNTYVNQNQNEKGIATYDKLISGYKSSSYVAKAILKQ 653

Query: 234 VEAYVALALMDEAREVVSLIQERYPQGY 261
              Y      D A      +   YP   
Sbjct: 654 GLIYYNGNKEDLALTKFKKVVAEYPNSP 681



 Score = 54.4 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 84/244 (34%), Gaps = 46/244 (18%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
            T       +YE    ++ +    K    +++    +  +    K++L    + Y+  K 
Sbjct: 604 PTSQYADDALYELGNTYVNQNQNEKGIATYDKLISGYKSSSYVAKAILKQGLIYYNGNKE 663

Query: 111 QQAASLGEEYITQYPESKNV------------------DYVYYLVGMSYAQMIR-DVPYD 151
             A +  ++ + +YP S                     +Y  ++  +S+ ++   D+  D
Sbjct: 664 DLALTKFKKVVAEYPNSPESLEAVSTARLIYVDKGQVDEYATWVKTLSFVEVSDADLDND 723

Query: 152 ----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
                     Q  +K  +   S  V ++ N  +   A                 + + Y 
Sbjct: 724 TYESAEKQYLQNNSKQAISGFSSYVSKFPNGLHALKAN--------------FYLAQLYF 769

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI--QERYPQ 259
                  ++  ++ V+A  S  E  E+A+ARL + Y+     D A  V+  +  +  +PQ
Sbjct: 770 ADNLEANSVKHYEFVIAQ-SRNEFTEQALARLCQVYLKEKNYDSAIPVLKRLEAEAEFPQ 828

Query: 260 GYWA 263
               
Sbjct: 829 NTTY 832



 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 38/111 (34%), Gaps = 10/111 (9%)

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            E   + ++ +P +  A  +L        +  + ++  +  ++ I+ Y  S  V      
Sbjct: 593 IEDLEKFAKTYPTSQYADDALYELGNTYVNQNQNEKGIATYDKLISGYKSSSYVAKAILK 652

Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA--RFYVTVG 185
            G+ Y    ++         L L    ++V  Y NSP    A     +   
Sbjct: 653 QGLIYYNGNKE--------DLALTKFKKVVAEYPNSPESLEAVSTARLIYV 695



 Score = 43.2 bits (101), Expect = 0.038,   Method: Composition-based stats.
 Identities = 24/222 (10%), Positives = 69/222 (31%), Gaps = 39/222 (17%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           +  +    +   ++ +     ++LKE+N+  A     +   +  F      +        
Sbjct: 782 EFVIAQSRNEFTEQALARLCQVYLKEKNYDSAIPVLKRLEAEAEFPQNTTYAQSNLMKSY 841

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR--ATKLMLQYM 162
           Y    +  A    +                    +   ++   +  D +    +  ++  
Sbjct: 842 YEKQDFTNAVVYAD------------------KVLKNDKIDDRIKSDAQIIVARSAIKTN 883

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYL-----KRGEYVAAIPRFQLV 216
                     P  K A   +     ++A  E+     YY      K G++  +    Q +
Sbjct: 884 DE--------PKAKEAYAKLQ----KIAKGELAAEALYYDAYFKNKEGKFEPSNVVVQKI 931

Query: 217 LANYSDAEHA-EEAMARLVEAYVALALMDEAREVVSLIQERY 257
             +YS  ++   +++  + + +  L    +A  ++  + E +
Sbjct: 932 AKDYSGYKYFGAKSLVIMAKNFYGLKDSFQATYILESVIENF 973



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 32/239 (13%), Positives = 74/239 (30%), Gaps = 54/239 (22%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           + +    + ++  AY  F +   +   A    ++    A  +Y+  ++++A    ++++ 
Sbjct: 430 RGLELYTDGDYKGAYALFKKSISENKEAKFTARATFWKAETEYNLDQFEEAKLSFKQFLN 489

Query: 123 -----QYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
                  PE KN +Y   Y     SY ++        +  +  ++Y          S  V
Sbjct: 490 ATEASNTPEFKNANYNLAY-----SYFKL--------KEYESAIEYFDSF------SKSV 530

Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI------------------------- 210
           K  +  +T    +L        +Y+     Y  AI                         
Sbjct: 531 KDDKIRLTDAYLRLGDCNFMAAKYWPAMDAYNKAIDMKSVDADYAAFQKGISYGFVSKPD 590

Query: 211 ---PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
                 +     Y  +++A++A+  L   YV     ++       +   Y    +    
Sbjct: 591 RKIEDLEKFAKTYPTSQYADDALYELGNTYVNQNQNEKGIATYDKLISGYKSSSYVAKA 649


>gi|261822328|ref|YP_003260434.1| tol-pal system protein YbgF [Pectobacterium wasabiae WPP163]
 gi|261606341|gb|ACX88827.1| tol-pal system protein YbgF [Pectobacterium wasabiae WPP163]
          Length = 258

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 51/150 (34%), Gaps = 12/150 (8%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGV 92
             VG +  ++      S  D       Y  A    L+++ + +A   F    + +P +  
Sbjct: 117 AAVGTDTGAANTAAPASTGDANSD---YNAAAALVLEKKQYDQAISAFQAFVKKYPDSTY 173

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
              +      + Y+ GK   AA      +  YP+S         VG+        +  ++
Sbjct: 174 QPNANYWLGQLNYNKGKKDDAAYYFANVVKNYPKSPKSSEALLKVGV--------IMQEK 225

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYV 182
                      ++V+ Y N+   K A+  +
Sbjct: 226 GQADKAKAVYQQVVKMYPNTESAKQAQKRL 255



 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             S       +  +++     +      V++Y +S Y   A +++               
Sbjct: 137 ANSDYNAAAALVLEKKQYDQAISAFQAFVKKYPDSTYQPNANYWLGQLN----------- 185

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
                +G+   A   F  V+ NY  +  + EA+ ++          D+A+ V   + + Y
Sbjct: 186 ---YNKGKKDDAAYYFANVVKNYPKSPKSSEALLKVGVIMQEKGQADKAKAVYQQVVKMY 242

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 243 PNTESAKQAQK 253



 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 46/126 (36%), Gaps = 22/126 (17%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +Y QA S  + ++ +YP+S       Y +G       +              Y + +V+
Sbjct: 152 KQYDQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYFANVVK 203

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y  SP    A   V V                 ++G+   A   +Q V+  Y + E A+
Sbjct: 204 NYPKSPKSSEALLKVGVIMQ--------------EKGQADKAKAVYQQVVKMYPNTESAK 249

Query: 228 EAMARL 233
           +A  RL
Sbjct: 250 QAQKRL 255



 Score = 43.2 bits (101), Expect = 0.035,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 2/71 (2%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           L++ +Y  AI  FQ  +  Y D+ +   A   L +        D+A    + + + YP+ 
Sbjct: 149 LEKKQYDQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFANVVKNYPKS 208

Query: 261 YWARYVETLVK 271
              +  E L+K
Sbjct: 209 --PKSSEALLK 217


>gi|319793388|ref|YP_004155028.1| toL-pal system protein ybgf [Variovorax paradoxus EPS]
 gi|315595851|gb|ADU36917.1| tol-pal system protein YbgF [Variovorax paradoxus EPS]
          Length = 249

 Score = 60.1 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 17/132 (12%), Positives = 48/132 (36%), Gaps = 8/132 (6%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
             ++  +E A+   +   F+++   F +  + +P +G    +L      QY+   Y +A 
Sbjct: 126 PKEKADFEAALGIFRAGQFAQSQTAFAEFVKRYPQSGYNASALFWLGNAQYATRNYNEAI 185

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
           +     ++  P+          +     ++        + T+   + +  + + Y  S  
Sbjct: 186 ANFRSMLSLAPDHAKAPEAVLSIANCQIEL--------KDTRSARRTLEDLAKAYPQSEA 237

Query: 175 VKGARFYVTVGR 186
            +  R  ++  R
Sbjct: 238 AQAGRERLSRLR 249



 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 36/105 (34%), Gaps = 14/105 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                 +  V+RY  S Y   A F++   +                   Y  AI  F+ +
Sbjct: 146 QSQTAFAEFVKRYPQSGYNASALFWLGNAQ--------------YATRNYNEAIANFRSM 191

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           L+   D   A EA+  +    + L     AR  +  + + YPQ  
Sbjct: 192 LSLAPDHAKAPEAVLSIANCQIELKDTRSARRTLEDLAKAYPQSE 236



 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 46/142 (32%), Gaps = 22/142 (15%)

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
            K+   +A   + AG++ Q+ +   E++ +YP+S       + +G +            R
Sbjct: 128 EKADFEAALGIFRAGQFAQSQTAFAEFVKRYPQSGYNASALFWLGNAQYAT--------R 179

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
                +     ++    +      A   +   + +L               +  +A    
Sbjct: 180 NYNEAIANFRSMLSLAPDHAKAPEAVLSIANCQIEL--------------KDTRSARRTL 225

Query: 214 QLVLANYSDAEHAEEAMARLVE 235
           + +   Y  +E A+    RL  
Sbjct: 226 EDLAKAYPQSEAAQAGRERLSR 247


>gi|242238604|ref|YP_002986785.1| tol-pal system protein YbgF [Dickeya dadantii Ech703]
 gi|242130661|gb|ACS84963.1| tol-pal system protein YbgF [Dickeya dadantii Ech703]
          Length = 269

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 47/126 (37%), Gaps = 9/126 (7%)

Query: 61  YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  AV   L+++ + +A   F    + +P +     +      + Y+ GK   +A     
Sbjct: 152 YNAAVALVLEKKQYDQAITAFQNFVKKYPDSTYQPNANYWLGQLFYNKGKKDDSAYYFAN 211

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       + VG+        +  ++  +        ++V+ Y N+   K A+
Sbjct: 212 VVKNYPKSPKASEAMFKVGV--------IMQEKGQSDKAKAIYQQVVKNYPNTDGAKQAQ 263

Query: 180 FYVTVG 185
             +   
Sbjct: 264 KRLAGL 269



 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 47/129 (36%), Gaps = 14/129 (10%)

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           S       +  +++     +      V++Y +S Y   A +++                +
Sbjct: 150 SDYNAAVALVLEKKQYDQAITAFQNFVKKYPDSTYQPNANYWLGQL-------------F 196

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           Y K  +  +A   F  V+ NY  +  A EAM ++          D+A+ +   + + YP 
Sbjct: 197 YNKGKKDDSA-YYFANVVKNYPKSPKASEAMFKVGVIMQEKGQSDKAKAIYQQVVKNYPN 255

Query: 260 GYWARYVET 268
              A+  + 
Sbjct: 256 TDGAKQAQK 264



 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 46/127 (36%), Gaps = 22/127 (17%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +Y QA +  + ++ +YP+S       Y +G  +    +              Y + +V+
Sbjct: 163 KQYDQAITAFQNFVKKYPDSTYQPNANYWLGQLFYNKGKKDD--------SAYYFANVVK 214

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y  SP    A F V V   +    +     Y              Q V+ NY + + A+
Sbjct: 215 NYPKSPKASEAMFKVGVIMQEKGQSDKAKAIY--------------QQVVKNYPNTDGAK 260

Query: 228 EAMARLV 234
           +A  RL 
Sbjct: 261 QAQKRLA 267


>gi|255011465|ref|ZP_05283591.1| TPR repeat-containing protein [Bacteroides fragilis 3_1_12]
 gi|313149284|ref|ZP_07811477.1| TPR domain-containing protein [Bacteroides fragilis 3_1_12]
 gi|313138051|gb|EFR55411.1| TPR domain-containing protein [Bacteroides fragilis 3_1_12]
          Length = 1002

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/206 (19%), Positives = 74/206 (35%), Gaps = 31/206 (15%)

Query: 44  RDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSR-DFPFAGVA--RKSLLM 99
           + + L+   +     + Y +    +L  +NF +A  Y++Q    + P    +  + +L+ 
Sbjct: 533 KYISLEKGENKTALADAYNRIGDCYLDVRNFDEAKHYYSQAEAMNTPSGDYSFYQLALVS 592

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
                     Y    +       +YP S       Y  G SY  M  +        +  +
Sbjct: 593 G-----LQKDYSGKITWLNRLAGKYPASPYAISALYEKGRSYVLMDNN--------QQAI 639

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
                ++ +Y  SP  + A                EIG  Y +  +Y  AI  ++ V+  
Sbjct: 640 TSFKELLAKYPESPVSRKAAA--------------EIGLLYYQNEDYNQAIDAYKQVVQK 685

Query: 220 YSDAEHAEEAMARLVEAYVALALMDE 245
           Y  ++ A  AM  L   YV +  +DE
Sbjct: 686 YPGSDEARLAMRDLKSIYVDMNRIDE 711



 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/294 (14%), Positives = 83/294 (28%), Gaps = 62/294 (21%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K    +  ++A C  V  + Q+S  +             +Y++      ++N++ A  
Sbjct: 1   MKKKISRLICAVACCVPVALQAQTSEKI--------TSPVNLYKEGKELFLQKNYAAAMP 52

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                 R      +  ++  M     Y     + A +    Y+  YP++ + + +Y L+ 
Sbjct: 53  PLRTFVRQKADVNLKEEAEYMLVCSAYELKD-RNAIAQLRSYLDTYPDTPHANRIYALIA 111

Query: 139 MSYAQM-----------------IRDVPYDQ------------RATKLMLQYMSRIVERY 169
            +Y                    + +   D                K    +   +    
Sbjct: 112 SAYFYQGNYDEALALFNSSRLDLLGNEERDDMTYRLATCYLKVGNVKEAAIWFETLKASS 171

Query: 170 TNSPYVKGARFYVTVGRNQLAAKE--------------------VEIGRYYLKRGEYVAA 209
               Y     +Y++  R      +                      I   Y  +  Y  A
Sbjct: 172 P--KYANDCSYYISYIRYTQKRYDEALKGFLPLQDDAKYKALVPYYIAEIYAIKKNYDKA 229

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS--LIQERYPQGY 261
               Q  L+ Y   EHA E    L +AY       +A       L +E  P+  
Sbjct: 230 QIVAQNYLSAYPQNEHAAEMYRILGDAYYHFGDYHKAVTSFRNYLEKENAPRRD 283



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 73/214 (34%), Gaps = 28/214 (13%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           Y    +   ++++ +A  +F +     +      +A  +             + +A    
Sbjct: 512 YNLGYIAFHQKDYVQAQNWFRKYISLEKGENKTALA-DAYNRIGDCYLDVRNFDEAKHYY 570

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
            +       + + DY +Y + +                   + +++R+  +Y  SPY   
Sbjct: 571 SQAEAMN--TPSGDYSFYQLALVSGLQKDYSGK--------ITWLNRLAGKYPASPYAIS 620

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           A                E GR Y+       AI  F+ +LA Y ++  + +A A +   Y
Sbjct: 621 AL--------------YEKGRSYVLMDNNQQAITSFKELLAKYPESPVSRKAAAEIGLLY 666

Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
                 ++A +    + ++YP    AR     +K
Sbjct: 667 YQNEDYNQAIDAYKQVVQKYPGSDEARLAMRDLK 700



 Score = 40.9 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 27/218 (12%), Positives = 75/218 (34%), Gaps = 26/218 (11%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL--L 98
            S +++          ++   E  +L+ + +++++A + + Q  + +P +  AR ++  L
Sbjct: 640 TSFKELLAKYPESPVSRKAAAEIGLLYYQNEDYNQAIDAYKQVVQKYPGSDEARLAMRDL 699

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
            S +V  +      A +         P +   D       ++Y    +         +  
Sbjct: 700 KSIYVDMNRIDEFAALASAM------PGNIRFD-ASEQDSLTYMAAEKIYMR--GRVEQA 750

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
            +   + ++ + +  +   A +Y+ +   +    ++               I      L 
Sbjct: 751 KESFGKYLQTFPDGAFGLNAHYYLCLIGKEQKNYDM---------------ILEHSGKLL 795

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            Y D   +EEA+    E         +A     +++E+
Sbjct: 796 EYPDNPFSEEALIMRAEVQFNKVQFADALASYKMLKEK 833


>gi|332704255|ref|ZP_08424343.1| tol-pal system protein YbgF [Desulfovibrio africanus str. Walvis
           Bay]
 gi|332554404|gb|EGJ51448.1| tol-pal system protein YbgF [Desulfovibrio africanus str. Walvis
           Bay]
          Length = 242

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 55/154 (35%), Gaps = 10/154 (6%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
              LV     +  D     +T  +  R  Y+KA+  + ++    A    N+   DFP + 
Sbjct: 97  GAVLVAASGTTMVDAGTKGLTPAQKAR--YDKALALVWDKKPEAARTLLNEFLVDFPTSN 154

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
           +   +L       YS  +Y  A    ++ + ++P           +G SY Q+       
Sbjct: 155 LTPNALYWLGETYYSQKRYSLAILTFKDVMRRFPVHSKASDAALKIGYSYEQL------- 207

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
              T+        +++ Y +S   + AR  +   
Sbjct: 208 -GDTQNARLVFKNLLKTYPDSNSAELARTKLKQL 240



 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 49/143 (34%), Gaps = 22/143 (15%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           A+K+    A       K + A +L  E++  +P S       Y +G +Y          Q
Sbjct: 119 AQKARYDKALALVWDKKPEAARTLLNEFLVDFPTSNLTPNALYWLGETYYS--------Q 170

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           +   L +     ++ R+        A   +     QL              G+   A   
Sbjct: 171 KRYSLAILTFKDVMRRFPVHSKASDAALKIGYSYEQL--------------GDTQNARLV 216

Query: 213 FQLVLANYSDAEHAEEAMARLVE 235
           F+ +L  Y D+  AE A  +L +
Sbjct: 217 FKNLLKTYPDSNSAELARTKLKQ 239



 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 41/117 (35%), Gaps = 16/117 (13%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           +     ++  +  +  S     A +++              G  Y  +  Y  AI  F+ 
Sbjct: 137 EAARTLLNEFLVDFPTSNLTPNALYWL--------------GETYYSQKRYSLAILTFKD 182

Query: 216 VLANYS-DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           V+  +   ++ ++ A+     +Y  L     AR V   + + YP    A    T +K
Sbjct: 183 VMRRFPVHSKASDAALKI-GYSYEQLGDTQNARLVFKNLLKTYPDSNSAELARTKLK 238


>gi|206602339|gb|EDZ38820.1| putative TPR domain-containing protein [Leptospirillum sp. Group II
           '5-way CG']
          Length = 274

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 46/116 (39%), Gaps = 8/116 (6%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
                +Y +A+   +  ++  + + F Q    +P + +A  +       +++   Y +A 
Sbjct: 150 PSADILYRQAMNDYQTGHYQLSKKEFGQVVSLYPQSHLASSAEFWVGQSEFNMKHYDKAV 209

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           S   + I  YP+S      Y+ +G SY  + +         K  +    R++E + 
Sbjct: 210 SSFLQVIKNYPDSPKRAVAYFKLGRSYESLGKK--------KDAIHSYRRVLELFP 257



 Score = 54.0 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 43/131 (32%), Gaps = 23/131 (17%)

Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
            + D + Y   M+  Q            +L  +   ++V  Y  S     A         
Sbjct: 150 PSAD-ILYRQAMNDYQT--------GHYQLSKKEFGQVVSLYPQSHLASSA--------- 191

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
                E  +G+       Y  A+  F  V+ NY D+     A  +L  +Y +L    +A 
Sbjct: 192 -----EFWVGQSEFNMKHYDKAVSSFLQVIKNYPDSPKRAVAYFKLGRSYESLGKKKDAI 246

Query: 248 EVVSLIQERYP 258
                + E +P
Sbjct: 247 HSYRRVLELFP 257



 Score = 42.0 bits (98), Expect = 0.089,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 44/124 (35%), Gaps = 22/124 (17%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y  G YQ +     + ++ YP+S       + VG S   M        +     +    +
Sbjct: 163 YQTGHYQLSKKEFGQVVSLYPQSHLASSAEFWVGQSEFNM--------KHYDKAVSSFLQ 214

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +++ Y +SP    A F +              GR Y   G+   AI  ++ VL  +    
Sbjct: 215 VIKNYPDSPKRAVAYFKL--------------GRSYESLGKKKDAIHSYRRVLELFPLER 260

Query: 225 HAEE 228
             +E
Sbjct: 261 QLDE 264



 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 24/68 (35%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
                  +++ KA   F Q  +++P +     +         S GK + A       +  
Sbjct: 196 GQSEFNMKHYDKAVSSFLQVIKNYPDSPKRAVAYFKLGRSYESLGKKKDAIHSYRRVLEL 255

Query: 124 YPESKNVD 131
           +P  + +D
Sbjct: 256 FPLERQLD 263


>gi|52842259|ref|YP_096058.1| outer membrane protein [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|52629370|gb|AAU28111.1| outer membrane protein [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
          Length = 322

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 53/140 (37%), Gaps = 25/140 (17%)

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              P  + + Y      ++  +++++  YD       ++ M   V++Y    Y   A   
Sbjct: 193 RANPADEQISY------LAAYELVKNKRYD-----EAIKSMQTFVQKYPRGGYTANA--- 238

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
                      E  +G  YL + +Y  AI  F++VL  Y  +  A  ++ +   AY    
Sbjct: 239 -----------EYWLGELYLVKKDYSKAIEHFEIVLQQYPSSSKAAASLLKSGYAYAEKG 287

Query: 242 LMDEAREVVSLIQERYPQGY 261
              EA++    + + YP   
Sbjct: 288 DKQEAKKRFQQVVKTYPDTP 307



 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 49/151 (32%), Gaps = 8/151 (5%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
            G      + V   S  +   ++  Y  A   +K + + +A +      + +P  G    
Sbjct: 178 AGSSNGKPQPVVAVSRANPADEQISYLAAYELVKNKRYDEAIKSMQTFVQKYPRGGYTAN 237

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +      +      Y +A    E  + QYP S          G +YA+            
Sbjct: 238 AEYWLGELYLVKKDYSKAIEHFEIVLQQYPSSSKAAASLLKSGYAYAEK--------GDK 289

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
           +   +   ++V+ Y ++P  + A   +    
Sbjct: 290 QEAKKRFQQVVKTYPDTPTAQLASSKLEAIN 320



 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 47/136 (34%), Gaps = 22/136 (16%)

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
            +   ++A+      +Y +A    + ++ +YP         Y +G  Y           +
Sbjct: 199 EQISYLAAYELVKNKRYDEAIKSMQTFVQKYPRGGYTANAEYWLGELYLVK--------K 250

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
                +++   ++++Y +S     +                     Y ++G+   A  RF
Sbjct: 251 DYSKAIEHFEIVLQQYPSSSKAAASLLKSGYA--------------YAEKGDKQEAKKRF 296

Query: 214 QLVLANYSDAEHAEEA 229
           Q V+  Y D   A+ A
Sbjct: 297 QQVVKTYPDTPTAQLA 312


>gi|21673472|ref|NP_661537.1| hypothetical protein CT0640 [Chlorobium tepidum TLS]
 gi|21646577|gb|AAM71879.1| conserved hypothetical protein [Chlorobium tepidum TLS]
          Length = 262

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 47/126 (37%), Gaps = 8/126 (6%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
             +  + ++ +K  +++ A E FN      P +     +    A   Y+   Y++A    
Sbjct: 143 EALLSEGLIKMKRGDYAGARESFNAFMTGNPKSPKVADAQFFLAETYYNEKWYEKAILEY 202

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           +  I +Y +S       Y  G+S+A++  +                 ++  Y  SP  K 
Sbjct: 203 QTVIARYTKSPKRPAALYKQGLSFAKIGDEAN--------AKARYKDVLNLYPQSPEAKL 254

Query: 178 ARFYVT 183
           A+  + 
Sbjct: 255 AQKNLD 260



 Score = 42.8 bits (100), Expect = 0.050,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 37/112 (33%), Gaps = 16/112 (14%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
             +  +  +     SP V  A+                +   Y     Y  AI  +Q V+
Sbjct: 161 ARESFNAFMTGNPKSPKVADAQ--------------FFLAETYYNEKWYEKAILEYQTVI 206

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAR-EVVSLIQERYPQGYWARYVET 268
           A Y+ +     A+ +   ++  +     A+     ++   YPQ   A+  + 
Sbjct: 207 ARYTKSPKRPAALYKQGLSFAKIGDEANAKARYKDVLNL-YPQSPEAKLAQK 257


>gi|320539137|ref|ZP_08038808.1| tol-pal system protein [Serratia symbiotica str. Tucson]
 gi|320030775|gb|EFW12783.1| tol-pal system protein [Serratia symbiotica str. Tucson]
          Length = 258

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 49/152 (32%), Gaps = 11/152 (7%)

Query: 33  CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVL-FLKEQNFSKAYEYFNQCSRDFPFAG 91
             + G    S+    + S          Y  AV   L+++ +  A   F    + +P + 
Sbjct: 116 AAVAGTSNGSTSTSVVPSNQGDENSN--YNTAVSLALEKKQYDPAISAFQSFVKQYPKST 173

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
               +      + Y+ GK   AA      +  Y +S       Y VG+        +  +
Sbjct: 174 YQPNANYWLGQLFYNKGKKDDAAYYFAVVVKNYAKSPKAPDAMYKVGI--------IMQE 225

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
           +           +++++Y  S     A+  V 
Sbjct: 226 KGQADKAKAVFQQVIKQYPTSAAATLAKSRVA 257



 Score = 54.4 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 46/121 (38%), Gaps = 14/121 (11%)

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           S       +  +++     +      V++Y  S Y   A +++                +
Sbjct: 140 SNYNTAVSLALEKKQYDPAISAFQSFVKQYPKSTYQPNANYWLGQL-------------F 186

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           Y K  +  AA   F +V+ NY+ +  A +AM ++          D+A+ V   + ++YP 
Sbjct: 187 YNKGKKDDAA-YYFAVVVKNYAKSPKAPDAMYKVGIIMQEKGQADKAKAVFQQVIKQYPT 245

Query: 260 G 260
            
Sbjct: 246 S 246



 Score = 42.4 bits (99), Expect = 0.068,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 27/66 (40%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           L++ +Y  AI  FQ  +  Y  + +   A   L + +      D+A    +++ + Y + 
Sbjct: 150 LEKKQYDPAISAFQSFVKQYPKSTYQPNANYWLGQLFYNKGKKDDAAYYFAVVVKNYAKS 209

Query: 261 YWARYV 266
             A   
Sbjct: 210 PKAPDA 215


>gi|158422150|ref|YP_001523442.1| TPR repeat-containing protein [Azorhizobium caulinodans ORS 571]
 gi|158329039|dbj|BAF86524.1| TPR repeat precursor [Azorhizobium caulinodans ORS 571]
          Length = 306

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 41/141 (29%), Gaps = 23/141 (16%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
             K L    +       Y QA    ++++  YP  +      +++G +            
Sbjct: 181 TPKDLYDLGYSYVQRQDYPQAEQTFKQFLQTYPTDRLTPDATFMLGETLYLR-------- 232

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           +  K   +   ++  +Y N      A   +      L  +E              AA   
Sbjct: 233 QTYKEAAEQFLQVSTKYPNFTRAPDALLRLGQSLAALNERE--------------AACAT 278

Query: 213 FQLVLANYSD-AEHAEEAMAR 232
           F  V   +     +  +A+ R
Sbjct: 279 FAEVDRKFPRATSNVRQAVER 299



 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/147 (13%), Positives = 50/147 (34%), Gaps = 15/147 (10%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              + R      V      +++Y+    +++ Q++ +A + F Q  + +P   +   +  
Sbjct: 164 GSGAQRPPVAAGVAAASTPKDLYDLGYSYVQRQDYPQAEQTFKQFLQTYPTDRLTPDATF 223

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQ---YPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           M     Y    Y++A    E+++     YP           +G S A +           
Sbjct: 224 MLGETLYLRQTYKEA---AEQFLQVSTKYPNFTRAPDALLRLGQSLAALNER-------- 272

Query: 156 KLMLQYMSRIVERYTN-SPYVKGARFY 181
           +      + +  ++   +  V+ A   
Sbjct: 273 EAACATFAEVDRKFPRATSNVRQAVER 299



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 41/125 (32%), Gaps = 22/125 (17%)

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
            Y +G SY Q                Q   + ++ Y        A F +           
Sbjct: 185 LYDLGYSYVQRQDYP--------QAEQTFKQFLQTYPTDRLTPDATFMLGETL------- 229

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
                 YL R  Y  A  +F  V   Y +   A +A+ RL ++  AL   + A    + +
Sbjct: 230 ------YL-RQTYKEAAEQFLQVSTKYPNFTRAPDALLRLGQSLAALNEREAACATFAEV 282

Query: 254 QERYP 258
             ++P
Sbjct: 283 DRKFP 287



 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 4/73 (5%)

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA-YVALALMDEAREVVSLIQERYP 258
           Y++R +Y  A   F+  L  Y       +A   L E  Y+     + A + + +   +YP
Sbjct: 192 YVQRQDYPQAEQTFKQFLQTYPTDRLTPDATFMLGETLYLRQTYKEAAEQFLQV-STKYP 250

Query: 259 QGYWARYVETLVK 271
              + R  + L++
Sbjct: 251 N--FTRAPDALLR 261


>gi|299137478|ref|ZP_07030660.1| Lytic transglycosylase catalytic [Acidobacterium sp. MP5ACTX8]
 gi|298600883|gb|EFI57039.1| Lytic transglycosylase catalytic [Acidobacterium sp. MP5ACTX8]
          Length = 801

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 53/138 (38%), Gaps = 7/138 (5%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                 +  +Y    ++L +++ + A   +    + FP +  A  +   +A++ Y    Y
Sbjct: 411 PQSRWLEEALYSGGNMYLLKRDSAHAIAEYTLLGQHFPRSTYAPNAHWRAAWLSYRLRHY 470

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             AA L +E IT YP    +    Y  G    +M  DV          + Y   +   Y 
Sbjct: 471 GDAARLMDEQITNYPAGTEIPGALYWRG----RMYEDVE---GNFGQAINYYKTLDASYV 523

Query: 171 NSPYVKGARFYVTVGRNQ 188
           NS Y   AR  + V  N+
Sbjct: 524 NSYYAMLARQRIAVLGNR 541


>gi|154491758|ref|ZP_02031384.1| hypothetical protein PARMER_01374 [Parabacteroides merdae ATCC
           43184]
 gi|154087999|gb|EDN87044.1| hypothetical protein PARMER_01374 [Parabacteroides merdae ATCC
           43184]
          Length = 999

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 65/218 (29%), Gaps = 36/218 (16%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ-------YSAG 108
           Y    Y     + K +++S A   F    R +      R++    A          Y   
Sbjct: 504 YALAYYNLGYSYFKLRDYSAALNRF----RQYVDLESNRQAA-SLADAYNRIGDCLYQNR 558

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           ++  A           P     DY  Y  G             Q+  K  +  M R++  
Sbjct: 559 QFSLAEENYSRAAQLSPS--AGDYSIYQKGFLLGL--------QKDYKGKISAMDRLISE 608

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y  S YV  A                E GR Y+      +A   F+ ++  +  +  A +
Sbjct: 609 YPESQYVDDAL--------------FEKGRSYVLLENSSSAAQAFEKLIREFPLSSLARK 654

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
           A  +L   Y      ++A      +   YP    A+  
Sbjct: 655 AGIQLGLLYYNDNQPEKALAAYKQVISNYPGSEEAKIA 692



 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 93/249 (37%), Gaps = 50/249 (20%)

Query: 39  ERQSSRDVYLDSVTDVRY-QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
            + S+ D  +    + +Y    ++EK   ++  +N S A + F +  R+FP + +ARK+ 
Sbjct: 597 GKISAMDRLISEYPESQYVDDALFEKGRSYVLLENSSSAAQAFEKLIREFPLSSLARKAG 656

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNV------------------DYVYYL--V 137
           +    + Y+  + ++A +  ++ I+ YP S+                     Y  Y+  +
Sbjct: 657 IQLGLLYYNDNQPEKALAAYKQVISNYPGSEEAKIALQDLKSVYIDLNDINAYASYVNSI 716

Query: 138 G------------MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           G            ++Y    +             + +   ++ +    +   A FY+   
Sbjct: 717 GGNIRLEVGEQDSLTYIAAEKLFMR--GDNDGARRSLINYLQTFPEGAFSSNANFYLGSI 774

Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
               A KE +             AI RF+ V+A+  D +  EE++AR  E          
Sbjct: 775 --AFAKKEFD------------EAIQRFKSVIAS-GDTKFLEESVARTAEIEYLSKDYPA 819

Query: 246 AREVVSLIQ 254
           A E    +Q
Sbjct: 820 ALESFKRLQ 828



 Score = 55.5 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 39/273 (14%), Positives = 95/273 (34%), Gaps = 57/273 (20%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
             I +C +VG      +  Y     D      ++ +       +N++   +      +  
Sbjct: 4   ILIPLCIVVGSHVAYGQRSYQFDAPDR-----LFVEGKELFSLKNYAGCIDKLEAYKQHS 58

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM--- 144
             A + +++  M  +  Y  G+   A  L ++Y+ +YP S++ D + Y++G  + +    
Sbjct: 59  TNADLIQEADYMLVYAAYEQGR-PNADELLKDYLEEYPASRHSDEIGYMIGSVHFKRGEY 117

Query: 145 -----------IRDVPYDQRAT---------------KLMLQYMSRIVERYTNSPYVKGA 178
                      I  +  +Q+                 +    Y +RI +      Y + +
Sbjct: 118 EKAIFWFNEADIDMLSPEQQEAYSFRLAYSLLQTGEMEKARGYFARIEQV--GDKYKEAS 175

Query: 179 RFYVTVGRNQLAAK--------------------EVEIGRYYLKRGEYVAAIPRFQLVLA 218
            +YV      +                       +  I + Y  + +Y   +   + +L+
Sbjct: 176 TYYVAYIDYAMGNYNNALIEFSRLKESPKYREQSQYYIAQIYFIQSKYEKVVKEGEELLS 235

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
            Y D+++  E    + ++Y  L   ++A  ++S
Sbjct: 236 LYPDSKNNSEMYRIVGDSYYHLGDQEKAIRMLS 268



 Score = 52.8 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 75/234 (32%), Gaps = 36/234 (15%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-KSLLMSAFVQYSAGKYQQAASLGE 118
           +++             A   F+Q  +   +   AR  +        Y  G+Y+ A S   
Sbjct: 431 LFQLGTQAFANVKLDDAVSLFSQAIQLGSYNMEARNDAYFWRGESYYRMGEYENAISDYR 490

Query: 119 EYITQYPESKNVDY---VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
            Y+      +N D     YY +G SY ++        R     L    + V+  +N    
Sbjct: 491 TYLN-NTRQRNTDMYALAYYNLGYSYFKL--------RDYSAALNRFRQYVDLESNRQAA 541

Query: 176 --KGARFYVTVG-------------RNQLAAKEVEIGRY--YLK------RGEYVAAIPR 212
               A   +                 ++ A      G Y  Y K      + +Y   I  
Sbjct: 542 SLADAYNRIGDCLYQNRQFSLAEENYSRAAQLSPSAGDYSIYQKGFLLGLQKDYKGKISA 601

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
              +++ Y ++++ ++A+     +YV L     A +    +   +P    AR  
Sbjct: 602 MDRLISEYPESQYVDDALFEKGRSYVLLENSSSAAQAFEKLIREFPLSSLARKA 655



 Score = 46.3 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 74/201 (36%), Gaps = 31/201 (15%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           ++ V D   +   Y  A +     N++ A   F++            +S    A + +  
Sbjct: 164 IEQVGDKYKEASTYYVAYIDYAMGNYNNALIEFSRLKES---PKYREQSQYYIAQIYFIQ 220

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            KY++    GEE ++ YP+SKN   +Y +VG SY  +           +  ++ +     
Sbjct: 221 SKYEKVVKEGEELLSLYPDSKNNSEMYRIVGDSYYHLGDQ--------EKAIRML----- 267

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
               S YV      +          ++ I G  Y  +G Y   +      +    + E  
Sbjct: 268 ----SKYVSSTENPL--------RSDLYILGVCYFNKGNYSNTVNALSRTVR--QNDELT 313

Query: 227 EEAMARLVEAYVALALMDEAR 247
           + A   L ++Y+ L   + AR
Sbjct: 314 QNAYLYLGQSYLKLGDKNNAR 334



 Score = 39.3 bits (91), Expect = 0.55,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 49/170 (28%), Gaps = 38/170 (22%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S T+   + ++Y   V +  + N+S      ++  R      + + + L         G 
Sbjct: 272 SSTENPLRSDLYILGVCYFNKGNYSNTVNALSRTVRQN--DELTQNAYLYLGQSYLKLGD 329

Query: 110 Y--------QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
                      A S  ++ I         +   Y    +YA +I +  +        +  
Sbjct: 330 KNNARMAFEAAATSSFDKQIK--------EVAMY----NYALLIHETAF--TGFGESVTI 375

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
               +  + NS Y      Y+                 YL    Y AA+ 
Sbjct: 376 FEDFLNDFPNSQYADKVNDYLVEV--------------YLTTKNYEAALK 411


>gi|251790480|ref|YP_003005201.1| tol-pal system protein YbgF [Dickeya zeae Ech1591]
 gi|247539101|gb|ACT07722.1| tol-pal system protein YbgF [Dickeya zeae Ech1591]
          Length = 272

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 46/126 (36%), Gaps = 9/126 (7%)

Query: 61  YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A    L+++ + +A   F    + +P +     +      + Y+ GK   +A     
Sbjct: 155 YNAAASLVLEKKQYDQAIVAFQNFVKKYPDSTYQPNANYWLGQLFYNKGKKDDSAYYFAN 214

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       + VG+        +  ++  T        ++++ Y N+   K A+
Sbjct: 215 VVKSYPKSPKASEAMFKVGL--------IMQEKGQTDKAKAVYQQVIKNYPNTDGAKQAQ 266

Query: 180 FYVTVG 185
             +   
Sbjct: 267 KRLDSL 272



 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 47/131 (35%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  +++     +      V++Y +S Y   A +++               
Sbjct: 151 ANTDYNAAASLVLEKKQYDQAIVAFQNFVKKYPDSTYQPNANYWLGQL------------ 198

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
            +Y K  +  +A   F  V+ +Y  +  A EAM ++          D+A+ V   + + Y
Sbjct: 199 -FYNKGKKDDSA-YYFANVVKSYPKSPKASEAMFKVGLIMQEKGQTDKAKAVYQQVIKNY 256

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 257 PNTDGAKQAQK 267



 Score = 49.0 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 48/126 (38%), Gaps = 22/126 (17%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +Y QA    + ++ +YP+S       Y +G  +    +              Y + +V+
Sbjct: 166 KQYDQAIVAFQNFVKKYPDSTYQPNANYWLGQLFYNKGKKDD--------SAYYFANVVK 217

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y  SP    A F V +                 ++G+   A   +Q V+ NY + + A+
Sbjct: 218 SYPKSPKASEAMFKVGLIMQ--------------EKGQTDKAKAVYQQVIKNYPNTDGAK 263

Query: 228 EAMARL 233
           +A  RL
Sbjct: 264 QAQKRL 269


>gi|71275794|ref|ZP_00652078.1| TPR repeat [Xylella fastidiosa Dixon]
 gi|71900393|ref|ZP_00682526.1| TPR repeat [Xylella fastidiosa Ann-1]
 gi|170730226|ref|YP_001775659.1| hypothetical protein Xfasm12_1070 [Xylella fastidiosa M12]
 gi|71163372|gb|EAO13090.1| TPR repeat [Xylella fastidiosa Dixon]
 gi|71729825|gb|EAO31923.1| TPR repeat [Xylella fastidiosa Ann-1]
 gi|167965019|gb|ACA12029.1| conserved hypothetical protein [Xylella fastidiosa M12]
          Length = 271

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/154 (12%), Positives = 49/154 (31%), Gaps = 10/154 (6%)

Query: 39  ERQSSRDVYLDSVTDVRYQRE--VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
             + S +V+ D+        E   Y  A   LK   ++ A E F    + +P       +
Sbjct: 124 MSEQSPNVHGDASALTISNEERIAYNVAFDALKNSKYADAAELFISFLQLYPNGVYTPNA 183

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
           +       Y+   +  A +     +++YP             +  A   ++         
Sbjct: 184 IYWLGESYYAMHDFVSAEAQFRSLLSRYPTHDKASGSLLKEALCQANQGKNDD------- 236

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
                + +++ +Y  +   + A+  +   +   A
Sbjct: 237 -AQHSLEQVLSQYPGTDAARLAQERLQSMKLSQA 269



 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 43/115 (37%), Gaps = 14/115 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              +     ++ Y N  Y   A +++              G  Y    ++V+A  +F+ +
Sbjct: 162 DAAELFISFLQLYPNGVYTPNAIYWL--------------GESYYAMHDFVSAEAQFRSL 207

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           L+ Y   + A  ++ +           D+A+  +  +  +YP    AR  +  ++
Sbjct: 208 LSRYPTHDKASGSLLKEALCQANQGKNDDAQHSLEQVLSQYPGTDAARLAQERLQ 262



 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 23/58 (39%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           LK  +Y  A   F   L  Y +  +   A+  L E+Y A+     A      +  RYP
Sbjct: 155 LKNSKYADAAELFISFLQLYPNGVYTPNAIYWLGESYYAMHDFVSAEAQFRSLLSRYP 212


>gi|296103327|ref|YP_003613473.1| tol-pal system protein YbgF [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295057786|gb|ADF62524.1| tol-pal system protein YbgF [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 264

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 45/123 (36%), Gaps = 9/123 (7%)

Query: 61  YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A+  +++++    A   F    + +P +     +      + Y+ GK   AA     
Sbjct: 146 YNAAIALVQDKSRQDDAIVAFQNFVKKYPDSTYQPNANYWLGQLNYNKGKKDDAAFYFAS 205

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       + VG+        +  D+  T        ++V ++  +   K A+
Sbjct: 206 VVKNYPKSPKAPDAMFKVGV--------IMQDKGDTAKAKAVYQQVVAKFPGTEGAKQAQ 257

Query: 180 FYV 182
             +
Sbjct: 258 KRL 260



 Score = 52.0 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 44/131 (33%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      V++Y +S Y   A +++               
Sbjct: 142 ANTDYNAAIALVQDKSRQDDAIVAFQNFVKKYPDSTYQPNANYWLGQLN----------- 190

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
             Y K  +  AA   F  V+ NY  +  A +AM ++           +A+ V   +  ++
Sbjct: 191 --YNKGKKDDAAFY-FASVVKNYPKSPKAPDAMFKVGVIMQDKGDTAKAKAVYQQVVAKF 247

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 248 PGTEGAKQAQK 258


>gi|42527006|ref|NP_972104.1| hypothetical protein TDE1498 [Treponema denticola ATCC 35405]
 gi|41817430|gb|AAS12015.1| conserved hypothetical protein [Treponema denticola ATCC 35405]
          Length = 501

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 33/92 (35%), Gaps = 7/92 (7%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
           LL       S G    A +  E++   Y  S N+D   +L G +Y     ++    +  K
Sbjct: 412 LLDMIRGYISEGNAASALNSAEDFFKNY--SVNLDEALFLRGQAY-----ELNGPNKNIK 464

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
             L+    + + Y  S +   A   +   +  
Sbjct: 465 KALEAYQTLTKAYPESKFWDKADARIRYIKKF 496



 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 30/74 (40%), Gaps = 5/74 (6%)

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAREVVSLIQ 254
           R Y+  G   +A+   +    NY  + + +EA+    +AY        + +A E    + 
Sbjct: 417 RGYISEGNAASALNSAEDFFKNY--SVNLDEALFLRGQAYELNGPNKNIKKALEAYQTLT 474

Query: 255 ERYPQGYWARYVET 268
           + YP+  +    + 
Sbjct: 475 KAYPESKFWDKADA 488


>gi|264677755|ref|YP_003277661.1| hypothetical protein CtCNB1_1619 [Comamonas testosteroni CNB-2]
 gi|262208267|gb|ACY32365.1| hypothetical conserved protein [Comamonas testosteroni CNB-2]
          Length = 253

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 49/137 (35%), Gaps = 8/137 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
             T  R +++ +E+A+   +   F +A + F    R +P +G            QY+   
Sbjct: 125 EFTADRNEQQEFEQALGMFRSGKFPEAGQAFAAFLRQWPKSGYTPSVRFWLGNSQYATRD 184

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y+ A +     +T  P           +     ++        + TK   + +  +++ Y
Sbjct: 185 YKNAIANFRSVMTNAPMHARAPEAALSIANCLVEL--------KDTKAARKTLEELLQAY 236

Query: 170 TNSPYVKGARFYVTVGR 186
            NS     A+  +   +
Sbjct: 237 PNSEAAGIAKSKLATLK 253



 Score = 40.9 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 36/105 (34%), Gaps = 14/105 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              Q  +  + ++  S Y    RF++   +             Y  R  Y  AI  F+ V
Sbjct: 150 EAGQAFAAFLRQWPKSGYTPSVRFWLGNSQ-------------YATRD-YKNAIANFRSV 195

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           + N      A EA   +    V L     AR+ +  + + YP   
Sbjct: 196 MTNAPMHARAPEAALSIANCLVELKDTKAARKTLEELLQAYPNSE 240



 Score = 35.5 bits (81), Expect = 9.0,   Method: Composition-based stats.
 Identities = 20/133 (15%), Positives = 41/133 (30%), Gaps = 22/133 (16%)

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
            +     A   + +GK+ +A      ++ Q+P+S     V + +G S          D  
Sbjct: 132 EQQEFEQALGMFRSGKFPEAGQAFAAFLRQWPKSGYTPSVRFWLGNSQY-----ATRD-- 184

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
             K  +     ++           A   +     +L               +  AA    
Sbjct: 185 -YKNAIANFRSVMTNAPMHARAPEAALSIANCLVEL--------------KDTKAARKTL 229

Query: 214 QLVLANYSDAEHA 226
           + +L  Y ++E A
Sbjct: 230 EELLQAYPNSEAA 242


>gi|121608001|ref|YP_995808.1| hypothetical protein Veis_1013 [Verminephrobacter eiseniae EF01-2]
 gi|121552641|gb|ABM56790.1| Tetratricopeptide TPR_2 repeat protein [Verminephrobacter eiseniae
           EF01-2]
          Length = 265

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 18/132 (13%), Positives = 47/132 (35%), Gaps = 8/132 (6%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
             ++  +E A+   +   F+ A   F+   R +P +G    +       QY+  +YQ+A 
Sbjct: 142 PAEKRDFEAALAVFRAGKFADAGLAFSSFVRQYPRSGFMPSARFWLGNAQYATREYQEAI 201

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
               + ++  P           +     ++        + T+   + +  +++ Y  S  
Sbjct: 202 VNFRQLLSDTPGHARAPEAALSIANCQMEL--------KDTRSARKTLEDLLQAYPQSEA 253

Query: 175 VKGARFYVTVGR 186
              A+  +   +
Sbjct: 254 ALAAKERLAYLK 265



 Score = 38.9 bits (90), Expect = 0.81,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 38/101 (37%), Gaps = 14/101 (13%)

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
             S  V +Y  S ++  ARF++   +                  EY  AI  F+ +L++ 
Sbjct: 166 AFSSFVRQYPRSGFMPSARFWLGNAQ--------------YATREYQEAIVNFRQLLSDT 211

Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
                A EA   +    + L     AR+ +  + + YPQ  
Sbjct: 212 PGHARAPEAALSIANCQMELKDTRSARKTLEDLLQAYPQSE 252


>gi|227327558|ref|ZP_03831582.1| hypothetical protein PcarcW_09600 [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 258

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 46/134 (34%), Gaps = 9/134 (6%)

Query: 50  SVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           +          Y  AV   L+++ + +A   F    + +P +     +      + Y+ G
Sbjct: 130 APASTGDANTDYNAAVALVLEKKQYDQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKG 189

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           K   AA      +  YP+S         VG+        +  ++           ++V+ 
Sbjct: 190 KKDDAAYYFANVVKNYPKSPKSSEALLKVGV--------IMQEKGQVDKAKAVYQQVVKM 241

Query: 169 YTNSPYVKGARFYV 182
           Y N+   K A+  +
Sbjct: 242 YPNTESAKQAQKRL 255



 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 41/112 (36%), Gaps = 14/112 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             +      V++Y +S Y   A +++                    +G+   A   F  V
Sbjct: 156 QAISAFQAFVKKYPDSTYQPNANYWLGQLN--------------YNKGKKDDAAYYFANV 201

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           + NY  +  + EA+ ++         +D+A+ V   + + YP    A+  + 
Sbjct: 202 VKNYPKSPKSSEALLKVGVIMQEKGQVDKAKAVYQQVVKMYPNTESAKQAQK 253



 Score = 49.0 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 47/129 (36%), Gaps = 22/129 (17%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +Y QA S  + ++ +YP+S       Y +G       +              Y + +V+
Sbjct: 152 KQYDQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYFANVVK 203

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y  SP    A   V V                 ++G+   A   +Q V+  Y + E A+
Sbjct: 204 NYPKSPKSSEALLKVGVIMQ--------------EKGQVDKAKAVYQQVVKMYPNTESAK 249

Query: 228 EAMARLVEA 236
           +A  RL  +
Sbjct: 250 QAQKRLSAS 258



 Score = 43.6 bits (102), Expect = 0.033,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 2/71 (2%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           L++ +Y  AI  FQ  +  Y D+ +   A   L +        D+A    + + + YP+ 
Sbjct: 149 LEKKQYDQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFANVVKNYPKS 208

Query: 261 YWARYVETLVK 271
              +  E L+K
Sbjct: 209 --PKSSEALLK 217


>gi|221068060|ref|ZP_03544165.1| tol-pal system protein YbgF [Comamonas testosteroni KF-1]
 gi|220713083|gb|EED68451.1| tol-pal system protein YbgF [Comamonas testosteroni KF-1]
          Length = 253

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 51/137 (37%), Gaps = 8/137 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
             T  R +++ +E+A+   +   F +A + F    R +P +G            QY+   
Sbjct: 125 EFTADRNEQQDFEQALGMFRSGKFPEAGQAFAAFLRQWPKSGYTPSVRFWLGNSQYATRD 184

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y+ A +     +T  P             +S    I +   + + TK   + +  +++ Y
Sbjct: 185 YKNAIANFRSVMTTTPMHARSPEA----ALS----IANCQVELKDTKAARKTLEELLQAY 236

Query: 170 TNSPYVKGARFYVTVGR 186
            NS     A+  +   +
Sbjct: 237 PNSEAAGIAKSKLATLK 253



 Score = 40.1 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 35/105 (33%), Gaps = 14/105 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              Q  +  + ++  S Y    RF++   +             Y  R  Y  AI  F+ V
Sbjct: 150 EAGQAFAAFLRQWPKSGYTPSVRFWLGNSQ-------------YATRD-YKNAIANFRSV 195

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +        + EA   +    V L     AR+ +  + + YP   
Sbjct: 196 MTTTPMHARSPEAALSIANCQVELKDTKAARKTLEELLQAYPNSE 240



 Score = 35.9 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 44/133 (33%), Gaps = 27/133 (20%)

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
            ++L M     + +GK+ +A      ++ Q+P+S     V + +G S          D  
Sbjct: 137 EQALGM-----FRSGKFPEAGQAFAAFLRQWPKSGYTPSVRFWLGNSQY-----ATRD-- 184

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
             K  +     ++           A   +   + +L               +  AA    
Sbjct: 185 -YKNAIANFRSVMTTTPMHARSPEAALSIANCQVEL--------------KDTKAARKTL 229

Query: 214 QLVLANYSDAEHA 226
           + +L  Y ++E A
Sbjct: 230 EELLQAYPNSEAA 242


>gi|261341332|ref|ZP_05969190.1| putative periplasmic protein [Enterobacter cancerogenus ATCC 35316]
 gi|288316637|gb|EFC55575.1| putative periplasmic protein [Enterobacter cancerogenus ATCC 35316]
          Length = 262

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 45/123 (36%), Gaps = 9/123 (7%)

Query: 61  YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A+  +++++    A   F    + +P +     +      + Y+ GK   AA     
Sbjct: 144 YNAAIALVQDKSRQDDAIVAFQNFVKKYPDSTYQPNANYWLGQLNYNKGKKDDAAFYFAS 203

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       + VG+        +  D+  T        ++V ++  +   K A+
Sbjct: 204 VVKNYPKSPKAPDAMFKVGV--------IMQDKGDTAKAKAVYQQVVAKFPGTEGAKQAQ 255

Query: 180 FYV 182
             +
Sbjct: 256 KRL 258



 Score = 52.0 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 44/131 (33%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      V++Y +S Y   A +++               
Sbjct: 140 ANTDYNAAIALVQDKSRQDDAIVAFQNFVKKYPDSTYQPNANYWLGQLN----------- 188

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
             Y K  +  AA   F  V+ NY  +  A +AM ++           +A+ V   +  ++
Sbjct: 189 --YNKGKKDDAAFY-FASVVKNYPKSPKAPDAMFKVGVIMQDKGDTAKAKAVYQQVVAKF 245

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 246 PGTEGAKQAQK 256


>gi|307823679|ref|ZP_07653907.1| tol-pal system protein YbgF [Methylobacter tundripaludum SV96]
 gi|307734973|gb|EFO05822.1| tol-pal system protein YbgF [Methylobacter tundripaludum SV96]
          Length = 285

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 46/133 (34%), Gaps = 8/133 (6%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
           +Q++     ++   V  +++ Y++A   L+  + ++A   FN      P    A  +   
Sbjct: 143 KQAAVQTSGEASAPVGDEKQQYQQAYEALRNGHNAQAIAEFNTLLGKNPKGEYANNAQYW 202

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
                        A       I  YP S  V      +G         +  +Q+      
Sbjct: 203 LGEAYRVNQDIDSARKAFSGVIENYPGSSKVPDALLKLG--------TIEVEQKNPVKAR 254

Query: 160 QYMSRIVERYTNS 172
           +Y++R+   + +S
Sbjct: 255 EYLTRVTVDFPSS 267



 Score = 44.0 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 15/104 (14%), Positives = 36/104 (34%), Gaps = 14/104 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             +   + ++ +     Y   A++++                 Y    +  +A   F  V
Sbjct: 178 QAIAEFNTLLGKNPKGEYANNAQYWLGEA--------------YRVNQDIDSARKAFSGV 223

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           + NY  +    +A+ +L    V      +ARE ++ +   +P  
Sbjct: 224 IENYPGSSKVPDALLKLGTIEVEQKNPVKAREYLTRVTVDFPSS 267



 Score = 38.9 bits (90), Expect = 0.71,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 2/71 (2%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           L+ G    AI  F  +L      E+A  A   L EAY     +D AR+  S + E YP  
Sbjct: 171 LRNGHNAQAIAEFNTLLGKNPKGEYANNAQYWLGEAYRVNQDIDSARKAFSGVIENYPGS 230

Query: 261 YWARYVETLVK 271
              +  + L+K
Sbjct: 231 S--KVPDALLK 239


>gi|118369961|ref|XP_001018183.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89299950|gb|EAR97938.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 3418

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 70/205 (34%), Gaps = 40/205 (19%)

Query: 64   AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
             + ++   + +KA   F +    +R        +  LL         G+   A S   ++
Sbjct: 1780 GLCYMNIGDMNKAIAAFKKQGQINRLH------KDYLLNLGKAYIKKGQTVDAISTLSKF 1833

Query: 121  ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
            +  YP+ +              +++  +   Q+  K  ++ +  ++E+Y         + 
Sbjct: 1834 MNLYPDIEET-----------YELLNYLFDLQQQPKKQIKILQNLLEKYPK-------KT 1875

Query: 181  YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
             +           + I     K+  Y  AI  ++  L     +   +    R+   YV  
Sbjct: 1876 KLN----------LNIADIQYKQKLYQEAIESYEKYLKENEGSREIQ---YRVAMCYVRK 1922

Query: 241  ALMDEAREVVSLIQERYPQGYWARY 265
             L+ EA E+++     YP     RY
Sbjct: 1923 NLLKEANEILNKSIALYPDMIEYRY 1947



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 60/186 (32%), Gaps = 34/186 (18%)

Query: 77   YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
             +        +P      K  L  A +QY    YQ+A    E+Y+ +   S+ +    Y 
Sbjct: 1861 IKILQNLLEKYP---KKTKLNLNIADIQYKQKLYQEAIESYEKYLKENEGSREI---QYR 1914

Query: 137  VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN---SPY-----------VKGARFYV 182
            V M Y +            K   + +++ +  Y +     Y            + ++  +
Sbjct: 1915 VAMCYVRK--------NLLKEANEILNKSIALYPDMIEYRYHLANVNLALGNYEESQKNI 1966

Query: 183  TVGRNQLAAKE--VEI-GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             +           + I  +    + +Y  A+ + ++ L  Y   +   E    L   Y  
Sbjct: 1967 ELLLEHNPDHISGLFILAKLQFIQKDYKNALEKLEICLNTY---DQIPELYYLLGCCYKK 2023

Query: 240  LALMDE 245
            L + D 
Sbjct: 2024 LGMKDL 2029



 Score = 35.9 bits (82), Expect = 5.9,   Method: Composition-based stats.
 Identities = 26/212 (12%), Positives = 60/212 (28%), Gaps = 35/212 (16%)

Query: 1    MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQRE 59
            +   L + I  +  +  +     +     ++  +      +  ++     +  D +++  
Sbjct: 2201 IQKDLTKTIEFYNEFDVKFVDQNVNALLVLSQAYFQQENTEKCQEFLNKLLQIDNKHENA 2260

Query: 60   VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            +Y + +L++K +   KA   F + +          KS      ++    KY +A S   +
Sbjct: 2261 LYLQGMLYVKLKQIDKAILEFQK-NDQH------DKSFYQLGVLKKKQKKYDEARSSFNK 2313

Query: 120  YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
             I                   Y +    + Y Q+       +            Y++   
Sbjct: 2314 AIQLNSNDPL-----------YYEAFGKLEYGQKEYLKACNHFE---------KYLQKVA 2353

Query: 180  FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
                   N  A         Y     Y  AI 
Sbjct: 2354 NPEIEIINLNAQS-------YYNIKMYKEAIN 2378


>gi|39997647|ref|NP_953598.1| putative lipoprotein [Geobacter sulfurreducens PCA]
 gi|39984539|gb|AAR35925.1| lipoprotein, putative [Geobacter sulfurreducens PCA]
 gi|298506587|gb|ADI85310.1| TPR domain lipoprotein [Geobacter sulfurreducens KN400]
          Length = 242

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 43/136 (31%), Gaps = 8/136 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           +  +     + Y KA       NF+ A E F     + P +  A  +L       YS   
Sbjct: 110 APREKDGPPDAYLKAFGLYSANNFAGAVEAFQAFLAEHPDSEYAGNALYWIGECHYSRSD 169

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
             +A         +YP S  V       G +   M        +  +   + +  +  +Y
Sbjct: 170 LPRALDAFRLVAERYPASTKVPDALLKSGYTLYAM--------KEPERAREILESLAAKY 221

Query: 170 TNSPYVKGARFYVTVG 185
             SP    AR  + V 
Sbjct: 222 PRSPAAAKARERLAVA 237



 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 45/140 (32%), Gaps = 30/140 (21%)

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           AF  YSA  +  A    + ++ ++P+S+      Y +G  +     D+P         L 
Sbjct: 124 AFGLYSANNFAGAVEAFQAFLAEHPDSEYAGNALYWIGECHYSRS-DLPR-------ALD 175

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA-- 218
               + ERY  S  V  A          +   E                  R + +L   
Sbjct: 176 AFRLVAERYPASTKVPDALLKSGYTLYAMKEPE------------------RAREILESL 217

Query: 219 --NYSDAEHAEEAMARLVEA 236
              Y  +  A +A  RL  A
Sbjct: 218 AAKYPRSPAAAKARERLAVA 237



 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 38/104 (36%), Gaps = 14/104 (13%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
            ++     +  + +S Y   A +++                    R +   A+  F+LV 
Sbjct: 136 AVEAFQAFLAEHPDSEYAGNALYWIGECH--------------YSRSDLPRALDAFRLVA 181

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             Y  +    +A+ +      A+   + ARE++  +  +YP+  
Sbjct: 182 ERYPASTKVPDALLKSGYTLYAMKEPERAREILESLAAKYPRSP 225



 Score = 42.8 bits (100), Expect = 0.057,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 32/87 (36%), Gaps = 1/87 (1%)

Query: 46  VYLDSVTDVRYQ-REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
            +L    D  Y    +Y          +  +A + F   +  +P +     +LL S +  
Sbjct: 142 AFLAEHPDSEYAGNALYWIGECHYSRSDLPRALDAFRLVAERYPASTKVPDALLKSGYTL 201

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVD 131
           Y+  + ++A  + E    +YP S    
Sbjct: 202 YAMKEPERAREILESLAAKYPRSPAAA 228



 Score = 35.5 bits (81), Expect = 9.2,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 2/68 (2%)

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
             +  A+  FQ  LA + D+E+A  A+  + E + + + +  A +   L+ ERYP     
Sbjct: 131 NNFAGAVEAFQAFLAEHPDSEYAGNALYWIGECHYSRSDLPRALDAFRLVAERYPAST-- 188

Query: 264 RYVETLVK 271
           +  + L+K
Sbjct: 189 KVPDALLK 196


>gi|307610773|emb|CBX00385.1| hypothetical protein LPW_21061 [Legionella pneumophila 130b]
          Length = 326

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 53/140 (37%), Gaps = 25/140 (17%)

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              P  + + Y      ++  +++++  YD       ++ M   V++Y    Y   A   
Sbjct: 197 RANPADEQISY------LAAYELVKNKRYD-----EAIKSMQTFVQKYPRGGYTANA--- 242

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
                      E  +G  YL + +Y  AI  F++VL  Y  +  A  ++ +   AY    
Sbjct: 243 -----------EYWLGELYLVKKDYPKAIEHFEIVLQQYPSSSKAAASLLKSGYAYAEKG 291

Query: 242 LMDEAREVVSLIQERYPQGY 261
              EA++    + + YP   
Sbjct: 292 DTQEAKKRFQQVVKTYPDTP 311



 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 50/151 (33%), Gaps = 8/151 (5%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
            G      + V   S  +   ++  Y  A   +K + + +A +      + +P  G    
Sbjct: 182 TGPSNSKPQPVIAVSRANPADEQISYLAAYELVKNKRYDEAIKSMQTFVQKYPRGGYTAN 241

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +      +      Y +A    E  + QYP S          G +YA+           T
Sbjct: 242 AEYWLGELYLVKKDYPKAIEHFEIVLQQYPSSSKAAASLLKSGYAYAEK--------GDT 293

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
           +   +   ++V+ Y ++P  + A   +    
Sbjct: 294 QEAKKRFQQVVKTYPDTPTAQLASSKLEAIN 324



 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/136 (16%), Positives = 49/136 (36%), Gaps = 22/136 (16%)

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
            +   ++A+      +Y +A    + ++ +YP         Y +G     + +D P    
Sbjct: 203 EQISYLAAYELVKNKRYDEAIKSMQTFVQKYPRGGYTANAEYWLG-ELYLVKKDYP---- 257

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
                +++   ++++Y +S     +                     Y ++G+   A  RF
Sbjct: 258 ---KAIEHFEIVLQQYPSSSKAAASLLKSGYA--------------YAEKGDTQEAKKRF 300

Query: 214 QLVLANYSDAEHAEEA 229
           Q V+  Y D   A+ A
Sbjct: 301 QQVVKTYPDTPTAQLA 316


>gi|57242172|ref|ZP_00370112.1| competence lipoprotein (comL) [Campylobacter upsaliensis RM3195]
 gi|57017364|gb|EAL54145.1| competence lipoprotein (comL) [Campylobacter upsaliensis RM3195]
          Length = 215

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 69/177 (38%), Gaps = 15/177 (8%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            +  S+ + F      ++  ++Y  S +        Y + +  L++++  KA  +++  +
Sbjct: 5   LLILSLIITFFTACSTKNKDELYNLSSSQW------YTQIIKDLQDKDLEKADTHYSGMA 58

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
            +     +   +L++ A       +YQ A    +EY  ++  SKNVDY  YL   +  + 
Sbjct: 59  SEHIADPLLEPTLIILAQAHMDEEEYQLAEFYLDEYNKKFGNSKNVDYTRYLKIKAKFEA 118

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
                 +Q       Q +   ++ Y N+ Y    +  +T            I  +YL
Sbjct: 119 FAVPNRNQALMLQSQQEIDNFLKEYPNTQYKPLVQTMLTK---------FNIAVFYL 166


>gi|167035187|ref|YP_001670418.1| tol-pal system protein YbgF [Pseudomonas putida GB-1]
 gi|166861675|gb|ABZ00083.1| tol-pal system protein YbgF [Pseudomonas putida GB-1]
          Length = 268

 Score = 59.7 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 51/136 (37%), Gaps = 8/136 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D   ++  Y+ A   +K+++F KA + FN   R +P +  A  +      V  + G 
Sbjct: 141 EPGDPAKEKLYYDAAFDLIKQKDFDKASQAFNAFLRKYPNSQYAGNAQYWLGEVNLAKGD 200

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
              A+    +   +YP+   V    Y +         DV      T  +   + +++ +Y
Sbjct: 201 LPGASQAFAQVSQKYPKHSKVPDSLYKLA--------DVERRMGHTDKVKGILQQVITQY 252

Query: 170 TNSPYVKGARFYVTVG 185
             +   + A+  +   
Sbjct: 253 PGTSAAQLAQRDLQKL 268



 Score = 54.4 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 44/120 (36%), Gaps = 14/120 (11%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           Q+      Q  +  + +Y NS Y   A++++      LA  ++              A  
Sbjct: 161 QKDFDKASQAFNAFLRKYPNSQYAGNAQYWLGEVN--LAKGDL------------PGASQ 206

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
            F  V   Y       +++ +L +    +   D+ + ++  +  +YP    A+  +  ++
Sbjct: 207 AFAQVSQKYPKHSKVPDSLYKLADVERRMGHTDKVKGILQQVITQYPGTSAAQLAQRDLQ 266


>gi|325474068|gb|EGC77256.1| hypothetical protein HMPREF9353_01606 [Treponema denticola F0402]
          Length = 517

 Score = 59.7 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 33/92 (35%), Gaps = 7/92 (7%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
           LL       S G    A +  E++   Y  S N+D   +L G +Y     ++    +  K
Sbjct: 428 LLDMIRGYISEGNAASALNSAEDFFKNY--SVNLDEALFLRGQAY-----ELNGPNKNIK 480

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
             L+    + + Y  S +   A   +   +  
Sbjct: 481 KALEAYQTLTKAYPESKFWDKADARIRYIKKF 512



 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 30/74 (40%), Gaps = 5/74 (6%)

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAREVVSLIQ 254
           R Y+  G   +A+   +    NY  + + +EA+    +AY        + +A E    + 
Sbjct: 433 RGYISEGNAASALNSAEDFFKNY--SVNLDEALFLRGQAYELNGPNKNIKKALEAYQTLT 490

Query: 255 ERYPQGYWARYVET 268
           + YP+  +    + 
Sbjct: 491 KAYPESKFWDKADA 504


>gi|15606983|ref|NP_214365.1| hypothetical protein aq_1989 [Aquifex aeolicus VF5]
 gi|2984229|gb|AAC07758.1| putative protein [Aquifex aeolicus VF5]
          Length = 853

 Score = 59.4 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 57/131 (43%), Gaps = 12/131 (9%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
               EVY   + +  +  + KA  YF + +++        K+LL  A   Y+ G+ ++A 
Sbjct: 495 ETPEEVYLTGLSYFIDGEYEKAIPYFEKLTQN---EEYRLKALLKLADSYYNLGQKEKAR 551

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
           ++    +++Y ++        L+G++  ++       +  TK + + +    E+Y NSP 
Sbjct: 552 AIYTLILSKYSQNPEAKEA--LLGVAQIEI-------EAPTKELEKIVKDFEEKYPNSPL 602

Query: 175 VKGARFYVTVG 185
           +   +  +   
Sbjct: 603 LPELKLQLARI 613


>gi|187251683|ref|YP_001876165.1| putative tol-pal system protein [Elusimicrobium minutum Pei191]
 gi|186971843|gb|ACC98828.1| Putative Tol-Pal system protein [Elusimicrobium minutum Pei191]
          Length = 229

 Score = 59.4 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 59/137 (43%), Gaps = 8/137 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S   V     V+E A + L ++ +  A E F      FP   + +++  +     ++  +
Sbjct: 101 SAKAVILPTTVFETAKVNLDDKKYDSAIEGFKLYIEKFPEGELVQEAYNLIGDAYFAKKE 160

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y+ AA      I +YP+SK      Y   + YA+ I  +P +++      QY+  I++ Y
Sbjct: 161 YKSAAIEYANLIKKYPKSKKTP--SYR--LKYAKSI--IPLNKKT--EAKQYLQSIIQDY 212

Query: 170 TNSPYVKGARFYVTVGR 186
             S   K A+  +   +
Sbjct: 213 PKSSEAKVAQRELGKLK 229



 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/121 (15%), Positives = 44/121 (36%), Gaps = 14/121 (11%)

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
           V  D +     ++     +E++     V+ A                 IG  Y  + EY 
Sbjct: 117 VNLDDKKYDSAIEGFKLYIEKFPEGELVQEAYN--------------LIGDAYFAKKEYK 162

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
           +A   +  ++  Y  ++       +  ++ + L    EA++ +  I + YP+   A+  +
Sbjct: 163 SAAIEYANLIKKYPKSKKTPSYRLKYAKSIIPLNKKTEAKQYLQSIIQDYPKSSEAKVAQ 222

Query: 268 T 268
            
Sbjct: 223 R 223



 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 31/68 (45%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            E  +  L   +Y +AI  F+L +  + + E  +EA   + +AY A      A    + +
Sbjct: 112 FETAKVNLDDKKYDSAIEGFKLYIEKFPEGELVQEAYNLIGDAYFAKKEYKSAAIEYANL 171

Query: 254 QERYPQGY 261
            ++YP+  
Sbjct: 172 IKKYPKSK 179


>gi|160872344|ref|ZP_02062476.1| TPR repeat protein [Rickettsiella grylli]
 gi|159121143|gb|EDP46481.1| TPR repeat protein [Rickettsiella grylli]
          Length = 357

 Score = 59.4 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 17/125 (13%), Positives = 44/125 (35%), Gaps = 8/125 (6%)

Query: 66  LFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
             LK + +++A   F   ++ FP       +      +    G+   A    +++IT+Y 
Sbjct: 231 QLLKTKQYNEAISAFEAFNKKFPNDLNGANADYFLGQLYLLQGQADSAIRFFKQFITRYS 290

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           +   V       G++Y                      +++++Y +S   + A   +   
Sbjct: 291 QDARVPDAMLQCGLAYFAKGDKA--------AATGLFEKLIQQYPDSKAAQAAEARLQQF 342

Query: 186 RNQLA 190
           +  ++
Sbjct: 343 KAMIS 347



 Score = 45.5 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 42/115 (36%), Gaps = 14/115 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             +       +++ N      A              +  +G+ YL +G+  +AI  F+  
Sbjct: 240 EAISAFEAFNKKFPNDLNGANA--------------DYFLGQLYLLQGQADSAIRFFKQF 285

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           +  YS      +AM +   AY A      A  +   + ++YP    A+  E  ++
Sbjct: 286 ITRYSQDARVPDAMLQCGLAYFAKGDKAAATGLFEKLIQQYPDSKAAQAAEARLQ 340


>gi|74318222|ref|YP_315962.1| TPR repeat-containing protein [Thiobacillus denitrificans ATCC
           25259]
 gi|74057717|gb|AAZ98157.1| conserved hypothetical protein containg TPR repeat [Thiobacillus
           denitrificans ATCC 25259]
          Length = 265

 Score = 59.4 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 31/79 (39%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
            +   YE A+   ++  +  A   F    + +P + +A  +     +  Y+   Y+ A +
Sbjct: 143 SESRAYEAALGQFRQGKYEDAIASFKGFLKTYPASTLAANAQYWVGYAYYALKDYKAALA 202

Query: 116 LGEEYITQYPESKNVDYVY 134
             ++ +  YP S  V    
Sbjct: 203 QQQKLVAAYPASPKVPDAL 221



 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 42/110 (38%), Gaps = 14/110 (12%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           Q   +  +      ++ Y  S     A+++V                 Y    +Y AA+ 
Sbjct: 157 QGKYEDAIASFKGFLKTYPASTLAANAQYWVGYA--------------YYALKDYKAALA 202

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           + Q ++A Y  +    +A+  +  + +AL  M  AR+ +  I  ++P   
Sbjct: 203 QQQKLVAAYPASPKVPDALLNMATSQIALDDMAGARKTLEQIVAKHPGTN 252



 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 2/71 (2%)

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
           A E  +G++  ++G+Y  AI  F+  L  Y  +  A  A   +  AY AL     A    
Sbjct: 147 AYEAALGQF--RQGKYEDAIASFKGFLKTYPASTLAANAQYWVGYAYYALKDYKAALAQQ 204

Query: 251 SLIQERYPQGY 261
             +   YP   
Sbjct: 205 QKLVAAYPASP 215


>gi|166365876|ref|YP_001658149.1| lytic transglycosylase catalytic precursor [Microcystis aeruginosa
           NIES-843]
 gi|166088249|dbj|BAG02957.1| lytic transglycosylase catalytic precursor [Microcystis aeruginosa
           NIES-843]
          Length = 722

 Score = 59.4 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 44/237 (18%), Positives = 88/237 (37%), Gaps = 31/237 (13%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           +DV   +   +   R  Y  A+  L++     A +      + +P   +A + LL     
Sbjct: 72  KDVADANAPSLDRSRARYLLAMDLLRKYEGGPALKQLEGLEKQYP--VLAPQILLKQGRA 129

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM---SYAQ-MIRDVPYDQRATKLML 159
              +   ++A  + ++ +  YP+S  V   YY +G    SY + ++++ P   R   L+ 
Sbjct: 130 HELSNDSEKAQEIWQKLLETYPQSPVVAEAYYSLGKYDPSYHEKLLKEYPRHPRTLALIR 189

Query: 160 QYMSRIVERYTNSPYVKGARFY-----VTVGRNQL----------AAKEVEIGRYYLKRG 204
           Q +    +++    +++ A+       +   R++L          A   + IG  Y + G
Sbjct: 190 QRLQENPDQFP--LWLQLAKANPFDPTLNQARDRLVKDYAEQLTPADWAM-IGAGYWQSG 246

Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            Y  A   +             E+A  R          + EAR     + + YPQ  
Sbjct: 247 LYEKAYKAYAKA------TPSPEQA-YRYARGLQIAKKLPEARSAYQKLIKTYPQAS 296



 Score = 52.4 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 74/240 (30%), Gaps = 29/240 (12%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
           A+     W+       Y           + Y  A      +   +A   + +  + +P A
Sbjct: 236 AMIGAGYWQSGLYEKAYKAYAKATPSPEQAYRYARGLQIAKKLPEARSAYQKLIKTYPQA 295

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
                 LL  A         + A +  +  + Q+P+                +++     
Sbjct: 296 SETGLGLLRLA----QISPNRDAIAYLDRIVKQFPD--RAPEALEAKA----KLLNS--- 342

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
                +   Q    ++ +Y  S             R  +A +         K G+Y  A 
Sbjct: 343 --TNAQAASQTWQTLLNKYPKSDEAAD-------YRWLMAQRA-------AKSGDYAKAW 386

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
              Q +  N SD++ A +A   + +    L    EA++  +    R+P  Y+A     L+
Sbjct: 387 QWAQPIAVNNSDSQTAPKAAFWVGKWAQKLGKNQEAKQAFTYTISRHPHSYYAWRSAVLL 446


>gi|188994328|ref|YP_001928580.1| hypothetical protein PGN_0464 [Porphyromonas gingivalis ATCC 33277]
 gi|188594008|dbj|BAG32983.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC
           33277]
          Length = 995

 Score = 59.4 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/225 (17%), Positives = 76/225 (33%), Gaps = 50/225 (22%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +YEK    +     + A E FN   +  P +  AR+S L    + Y+ G+ ++A    + 
Sbjct: 621 LYEKGCGAVLSGKHNVAEEAFNAVVKRSPDSREARQSSLQLGLLYYNTGRTKEAIRTYQR 680

Query: 120 YITQYPESKNV------------------DYVYYLVGMSYAQMIRDVPYDQ--------- 152
            I +YP S+                    +Y  Y+ G+     I     +Q         
Sbjct: 681 IIDRYPRSEETTVALSDLRSIYLEEDRIDEYSAYVRGLKDKVSIAPSETEQLGFLSAERK 740

Query: 153 --RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
             R      + +   +ERY        A              E+ +     + G   AA 
Sbjct: 741 YRRRQPDARRDLEAYLERYPQGSDRHKA--------------ELYLADLDYQAGNADAAY 786

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALA-LMDEAREVVSLIQ 254
            R+  ++    ++    E     ++A + L  +  E +E  + +Q
Sbjct: 787 NRYSRLV----NSPGLPE--DYKIDARLRLGRMQYERKEYKAALQ 825



 Score = 45.9 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 57/206 (27%), Gaps = 25/206 (12%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG-VARKSLLMSAFVQYSAGKYQQAAS 115
               Y         + +  A E F +       A  ++  +       +Y    +  A  
Sbjct: 508 PLGYYRLGYSLFNAERYDMALEAFKEYVSRSGIAPNLSADAYARIGDCRYMKRDFHGARE 567

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
                   YP     DY               +    +     +Q + +++  + +S ++
Sbjct: 568 AYSMAYRVYPSG--GDYALLRRA--------RLEGLAKQYADQIQTLDKLIREFPDSRHL 617

Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
             A  Y       L+ K   +                F  V+    D+  A ++  +L  
Sbjct: 618 T-AALYEKGCGAVLSGKH-NVAE------------EAFNAVVKRSPDSREARQSSLQLGL 663

Query: 236 AYVALALMDEAREVVSLIQERYPQGY 261
            Y       EA      I +RYP+  
Sbjct: 664 LYYNTGRTKEAIRTYQRIIDRYPRSE 689



 Score = 40.9 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 32/240 (13%), Positives = 61/240 (25%), Gaps = 60/240 (25%)

Query: 75  KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
            A          +P      K+ L  A + Y AG    A +    Y      S  +   Y
Sbjct: 747 DARRDLEAYLERYPQGSDRHKAELYLADLDYQAGN---ADAAYNRYSRLV-NSPGLPEDY 802

Query: 135 -----------------YLVGMSYAQMIRDVP-----YDQ-----RATKLMLQYMSRIVE 167
                            Y   +   Q + D        DQ       +    +   R+++
Sbjct: 803 KIDARLRLGRMQYERKEYKAALQSFQSVLDTDGAEAVRDQAVQGVTESAYADKDYRRVID 862

Query: 168 ---------RYTNSP--YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA------- 209
                       ++   Y   +   + + R  +A  E+    +    G   A        
Sbjct: 863 VIAGLKNQAALPHTLRLYRAKSYQALKMNREAIADYELLAEDFSTATGA-EAVVMQAQLE 921

Query: 210 --IPR---FQLVLANY-----SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
               R    + +L  +                 L + Y        AR+ +  +++ YP 
Sbjct: 922 MEAKRLSKAKFILEKFIAKSTPQQYWLARGFILLSDIYKKEGDTFTARQYLESLEKNYPN 981


>gi|54294941|ref|YP_127356.1| hypothetical protein lpl2020 [Legionella pneumophila str. Lens]
 gi|53754773|emb|CAH16260.1| hypothetical protein lpl2020 [Legionella pneumophila str. Lens]
          Length = 322

 Score = 59.4 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 53/140 (37%), Gaps = 25/140 (17%)

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              P  + + Y      ++  +++++  YD       ++ M   V++Y    Y   A   
Sbjct: 193 RANPADEQISY------LAAYELVKNKRYD-----EAIKSMQTFVQKYPRGGYTANA--- 238

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
                      E  +G  YL + +Y  AI  F++VL  Y  +  A  ++ +   AY    
Sbjct: 239 -----------EYWLGELYLVKKDYPKAIEHFEIVLQQYPSSSKAAASLLKSGYAYAEKG 287

Query: 242 LMDEAREVVSLIQERYPQGY 261
              EA++    + + YP   
Sbjct: 288 DTQEAKKRFQQVVKTYPDTP 307



 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 50/151 (33%), Gaps = 8/151 (5%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
            G      + V   S  +   ++  Y  A   +K + + +A +      + +P  G    
Sbjct: 178 AGPSNSKPQPVIAVSRANPADEQISYLAAYELVKNKRYDEAIKSMQTFVQKYPRGGYTAN 237

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +      +      Y +A    E  + QYP S          G +YA+           T
Sbjct: 238 AEYWLGELYLVKKDYPKAIEHFEIVLQQYPSSSKAAASLLKSGYAYAEK--------GDT 289

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
           +   +   ++V+ Y ++P  + A   +    
Sbjct: 290 QEAKKRFQQVVKTYPDTPTAQLASSKLEAIN 320



 Score = 52.8 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 46/136 (33%), Gaps = 22/136 (16%)

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
            +   ++A+      +Y +A    + ++ +YP         Y +G  Y            
Sbjct: 199 EQISYLAAYELVKNKRYDEAIKSMQTFVQKYPRGGYTANAEYWLGELYLVKKDYP----- 253

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
                +++   ++++Y +S     +                     Y ++G+   A  RF
Sbjct: 254 ---KAIEHFEIVLQQYPSSSKAAASLLKSGYA--------------YAEKGDTQEAKKRF 296

Query: 214 QLVLANYSDAEHAEEA 229
           Q V+  Y D   A+ A
Sbjct: 297 QQVVKTYPDTPTAQLA 312


>gi|189346281|ref|YP_001942810.1| tol-pal system protein YbgF [Chlorobium limicola DSM 245]
 gi|189340428|gb|ACD89831.1| tol-pal system protein YbgF [Chlorobium limicola DSM 245]
          Length = 255

 Score = 59.4 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 49/134 (36%), Gaps = 8/134 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
             + V     + +  +  L + +FS+A E F+   + +P + +   +    A   ++   
Sbjct: 130 KASSVLTDSALLKDGMQKLAKNSFSEARESFSLLMQTYPKSDLVDDAQFTIAESYFNEKW 189

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y++A    +  I +Y +S       Y   +++ Q+   V                +V  Y
Sbjct: 190 YEKAVLEYQVVIARYTKSNKRPAALYKQALAFEQLGDQVN--------ARARFRDVVSVY 241

Query: 170 TNSPYVKGARFYVT 183
            +S     A+  + 
Sbjct: 242 PSSSEAALAKKKLQ 255



 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 39/115 (33%), Gaps = 14/115 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              +  S +++ Y  S  V  A+                I   Y     Y  A+  +Q+V
Sbjct: 155 EARESFSLLMQTYPKSDLVDDAQ--------------FTIAESYFNEKWYEKAVLEYQVV 200

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           +A Y+ +     A+ +   A+  L     AR     +   YP    A   +  ++
Sbjct: 201 IARYTKSNKRPAALYKQALAFEQLGDQVNARARFRDVVSVYPSSSEAALAKKKLQ 255


>gi|253702301|ref|YP_003023490.1| tetratricopeptide TPR_2 repeat protein [Geobacter sp. M21]
 gi|251777151|gb|ACT19732.1| tetratricopeptide TPR_2 repeat protein [Geobacter sp. M21]
          Length = 304

 Score = 59.4 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 51/141 (36%), Gaps = 22/141 (15%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           +  G Y +A S  E  +  +P         Y + +SY +  +          + ++    
Sbjct: 39  FDQGDYYRAISEYERVLYFFPAEPAAKAAQYKIALSYLKGEK--------WGVAVEKFRT 90

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +  R+ +    + A                 +G  Y  + ++ +A+  +Q  ++ Y    
Sbjct: 91  LAGRHPDEETGRKAL--------------FMVGETYFAKKDHASALAAYQEFVSRYPQES 136

Query: 225 HAEEAMARLVEAYVALALMDE 245
            ++EA  ++   Y++    ++
Sbjct: 137 QSDEARMKMGWCYLSQGQWEQ 157



 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 44/125 (35%), Gaps = 15/125 (12%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A+ +LK + +  A E F   +   P     RK+L M     ++   +  A +  +E+
Sbjct: 69  YKIALSYLKGEKWGVAVEKFRTLAGRHPDEETGRKALFMVGETYFAKKDHASALAAYQEF 128

Query: 121 ITQYPESKNVDYVYYLVGMSYAQM---------IRDVPY------DQRATKLMLQYMSRI 165
           +++YP+    D     +G  Y             R +P       D +           +
Sbjct: 129 VSRYPQESQSDEARMKMGWCYLSQGQWEQGAGAFRGIPRESARHEDGQRLAAAAGEFPLL 188

Query: 166 VERYT 170
             +  
Sbjct: 189 PRKSP 193



 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 47/160 (29%), Gaps = 19/160 (11%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
            +A+  +      ++      S   +  +  +         + ++ +A   + +    FP
Sbjct: 5   IVAILLIFACSVGAA----FASPLQLTAESAL-SFGDHLFDQGDYYRAISEYERVLYFFP 59

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ---YPESKNVDYVYYLVGMSYAQMI 145
               A+ +    A       K+  A    E++ T    +P+ +      ++VG +Y    
Sbjct: 60  AEPAAKAAQYKIALSYLKGEKWGVAV---EKFRTLAGRHPDEETGRKALFMVGETYFAKK 116

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
                        L      V RY        AR  +   
Sbjct: 117 DHAS--------ALAAYQEFVSRYPQESQSDEARMKMGWC 148



 Score = 43.2 bits (101), Expect = 0.038,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 14/110 (12%)

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
           +DQ      +    R++  +   P  K A++ + +               YLK  ++  A
Sbjct: 39  FDQGDYYRAISEYERVLYFFPAEPAAKAAQYKIALS--------------YLKGEKWGVA 84

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           + +F+ +   + D E   +A+  + E Y A      A         RYPQ
Sbjct: 85  VEKFRTLAGRHPDEETGRKALFMVGETYFAKKDHASALAAYQEFVSRYPQ 134


>gi|327403579|ref|YP_004344417.1| hypothetical protein Fluta_1587 [Fluviicola taffensis DSM 16823]
 gi|327319087|gb|AEA43579.1| Tetratricopeptide TPR_1 repeat-containing protein [Fluviicola
           taffensis DSM 16823]
          Length = 1028

 Score = 59.4 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 83/212 (39%), Gaps = 27/212 (12%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG-VARKSLLMSAFVQYSAGKYQQAASLGEE 119
           + + V   ++  +  A + F    + +P +  V+ K++  SA  ++   KY +A     +
Sbjct: 432 FNRGVELFQKSEYQNAIKAFELVDK-YPISPEVSAKAMYWSADAEFYLKKYSEAVKKYSQ 490

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           ++              + G   + +  D  Y+     L L+   +  + + N  Y+K + 
Sbjct: 491 FMG-------------MSGSQSSGLRSDAMYNTGYAYLALKDPIKTQDAFRN--YLKESN 535

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS-----DAEHAEEAMARLV 234
             +T   N+ A   + +G  Y +  +    I   QL + NY         + ++A+  + 
Sbjct: 536 --LTDL-NKKADAHMRVGDEYFRNPKADNGIN--QLAIDNYKAAYNLKVGYDDQALYYMA 590

Query: 235 EAYVALALMDEAREVVSLIQERYPQGYWARYV 266
             Y  +   DE  + ++ +   YP+  + +  
Sbjct: 591 RTYGYMGKSDEKIQSLTDLINNYPKSRYMQRS 622



 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 69/207 (33%), Gaps = 18/207 (8%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
            + +Y  A  +       +  +       ++P +   ++S+   A V Y      +A   
Sbjct: 583 DQALYYMARTYGYMGKSDEKIQSLTDLINNYPKSRYMQRSIEEIALVYYQRENLDKAERY 642

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS---RIVERYTNSP 173
            ++ I+ YP S  V   Y+ +G    +        +     +L   +    I ER   S 
Sbjct: 643 YKQIISDYPTSSRVPEAYHYLGDIAFKRSN-FNQAETFYLKVLNEFNLNDTICEREVTSL 701

Query: 174 YVKGARFYVTVGRNQLAAK---EVEIG-----RYY------LKRGEYVAAIPRFQLVLAN 219
                   +      LA K      I       YY       ++ E+ A+I  F   L  
Sbjct: 702 ADVYRAQRLLNKIESLAGKYSCADSIATQVEDEYYRQGFDLYEKSEWNASIVEFDKYLNK 761

Query: 220 YSDAEHAEEAMARLVEAYVALALMDEA 246
           Y + +   +AM +  +A   L    +A
Sbjct: 762 YPNGKFYRDAMNQKADALYRLKKESDA 788



 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 53/146 (36%), Gaps = 26/146 (17%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDY---VYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           +   +Y  A      +IT Y  SKN  Y     Y  G+S  ++  +           +  
Sbjct: 38  FEKEQYSAARKEFRLFITDYKGSKNDSYYIKALYYEGLSALELFNN---------DAIDL 88

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
           +      Y  S Y            N L     +IGRYY ++ +Y  +I  F  +  +  
Sbjct: 89  LETFNREYPESIYRD----------NIL----FQIGRYYYQKKDYKRSIVYFNQLNRSSV 134

Query: 222 DAEHAEEAMARLVEAYVALALMDEAR 247
           + E+ EE   +L  AY       E++
Sbjct: 135 EKENQEEYYFKLGYAYFDEKQYPESK 160



 Score = 39.7 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 66/203 (32%), Gaps = 23/203 (11%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
            + + E Y +     ++  ++ +   F++    +P     R ++   A   Y   K   A
Sbjct: 729 TQVEDEYYRQGFDLYEKSEWNASIVEFDKYLNKYPNGKFYRDAMNQKADALYRLKKESDA 788

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
            ++ +  IT      N DY      ++  +  + + ++    +  L Y  R  E  +N  
Sbjct: 789 IAIYK--ITL--AGPNDDYTE----LASVRTAKFL-FNGTQKEAALPYYKRTEESSSNPE 839

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
           Y+  AR  +      L                Y  A+   Q VL      +   EA    
Sbjct: 840 YLNNARIGLMRCHFLL--------------ENYANAVEYAQKVLGVQQTTQLKLEAEYIK 885

Query: 234 VEAYVALALMDEAREVVSLIQER 256
             +      + EA   +  + + 
Sbjct: 886 GVSLSKEKRVAEAEISLEYVVKN 908


>gi|16116639|emb|CAC82711.1| YbgF protein [Erwinia chrysanthemi]
          Length = 274

 Score = 59.4 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 46/126 (36%), Gaps = 9/126 (7%)

Query: 61  YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A    L+++ + +A   F    + +P +     +      + Y+ GK   AA     
Sbjct: 157 YNTAASLVLEKKQYDQAIVAFQNFVKKYPDSTYQPNANYWLGQLFYNKGKKDDAAYYFAN 216

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       + VG+        +  ++  T        ++V+ Y N+   K A+
Sbjct: 217 VVKNYPKSPKASEAMFKVGV--------IMQEKGQTDKAKAVYQQVVKTYPNTDGAKQAQ 268

Query: 180 FYVTVG 185
             +   
Sbjct: 269 KRLAGL 274



 Score = 56.7 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 47/131 (35%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  +++     +      V++Y +S Y   A +++               
Sbjct: 153 ANTDYNTAASLVLEKKQYDQAIVAFQNFVKKYPDSTYQPNANYWLGQL------------ 200

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
            +Y K  +  AA   F  V+ NY  +  A EAM ++          D+A+ V   + + Y
Sbjct: 201 -FYNKGKKDDAA-YYFANVVKNYPKSPKASEAMFKVGVIMQEKGQTDKAKAVYQQVVKTY 258

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 259 PNTDGAKQAQK 269



 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 47/127 (37%), Gaps = 22/127 (17%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +Y QA    + ++ +YP+S       Y +G  +    +              Y + +V+
Sbjct: 168 KQYDQAIVAFQNFVKKYPDSTYQPNANYWLGQLFYNKGKKDD--------AAYYFANVVK 219

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y  SP    A F V V                 ++G+   A   +Q V+  Y + + A+
Sbjct: 220 NYPKSPKASEAMFKVGVIMQ--------------EKGQTDKAKAVYQQVVKTYPNTDGAK 265

Query: 228 EAMARLV 234
           +A  RL 
Sbjct: 266 QAQKRLA 272


>gi|294507873|ref|YP_003571931.1| Conserved hypothetical protein, containing tetratricopeptide repeat
           domain [Salinibacter ruber M8]
 gi|294344201|emb|CBH24979.1| Conserved hypothetical protein, containing tetratricopeptide repeat
           domain [Salinibacter ruber M8]
          Length = 639

 Score = 59.4 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 75/235 (31%), Gaps = 30/235 (12%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                 +   Y++  + +   +  +A   F++ + +   + +A ++    A + +  G++
Sbjct: 414 PETAAAEEGQYQRGRIAVLRDSLDRARLLFSRLAANAQSSDLADQAQYELALLHFYQGEF 473

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMS--------------YAQMIRDVPYDQRATK 156
              A+     I++ P +   +    L  +                   +R     Q A  
Sbjct: 474 DATAARAAS-ISENPSADVANDAIALKTLLQEARGPDSLDTPLRTFARVRLYER-QHAYG 531

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             L  +  ++ R+   P    ARF        LA  +              AA+  F+ V
Sbjct: 532 RALDSLDALLRRHPRHPLADDARFRRANI--HLARHDTS------------AALTAFRAV 577

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
              +  +  A+ ++ R      A      A E    +   YP    A    + ++
Sbjct: 578 PERHPRSPFADRSLFRSASLLEANGRPAAAVETYDRLLSEYPTSLLAGDARSRLR 632



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 68/214 (31%), Gaps = 49/214 (22%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK-------- 109
           + ++  A      Q +  A          +P +GVA ++  +   +              
Sbjct: 295 QILFGFARRAADAQRYGVATRACEAIQEQYPRSGVAPEAQKLRGDLYRRWADQGADSTTA 354

Query: 110 ------YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
                 Y +A +  + ++ + P   +       +G       R++           + +S
Sbjct: 355 AQDSVRYARARTAYKTFLRENPGHADYPAALLRLGTLQIDAYRNLD-------DAQETLS 407

Query: 164 RIVERYTNSPYVKGARF---YVTVGRNQL----------------------AAKEVEIGR 198
           ++V  +  +   +  ++    + V R+ L                      A  E+ +  
Sbjct: 408 QLVSNHPETAAAEEGQYQRGRIAVLRDSLDRARLLFSRLAANAQSSDLADQAQYELALLH 467

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
           +Y   GE+ A   R   +  N   A+ A +A+A 
Sbjct: 468 FYQ--GEFDATAARAASISEN-PSADVANDAIAL 498



 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 37/115 (32%), Gaps = 8/115 (6%)

Query: 73  FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
           + +A +  +   R  P   +A  +    A +  +      A +       ++P S   D 
Sbjct: 530 YGRALDSLDALLRRHPRHPLADDARFRRANIHLARHDTSAALTAFRAVPERHPRSPFAD- 588

Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
                  S  +    +  + R     ++   R++  Y  S     AR  + V R 
Sbjct: 589 ------RSLFRSASLLEANGRPA-AAVETYDRLLSEYPTSLLAGDARSRLRVLRR 636


>gi|116048899|ref|YP_792300.1| hypothetical protein PA14_51690 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115584120|gb|ABJ10135.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 274

 Score = 59.4 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 48/137 (35%), Gaps = 8/137 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D   ++  Y+ A   +K ++F KA + FN   R +P +  +  +      V  + G 
Sbjct: 146 EPGDPAKEKLYYDAAFDLIKSKDFDKASQAFNAFLRKYPNSQYSGNAQYWLGEVNLAKGD 205

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            Q A          YP S+ V    Y +         DV             + +++ +Y
Sbjct: 206 LQGAGQAFARVSQSYPSSQKVPDSLYKLA--------DVERRLGNNDKAKGILQQVISQY 257

Query: 170 TNSPYVKGARFYVTVGR 186
             +   + A+  +   R
Sbjct: 258 PGTSAAQLAQRDLKNLR 274



 Score = 58.6 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 57/147 (38%), Gaps = 22/147 (14%)

Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
           P     + +YY        +I+   +D        Q  +  + +Y NS Y   A++++  
Sbjct: 147 PGDPAKEKLYYDAA---FDLIKSKDFD-----KASQAFNAFLRKYPNSQYSGNAQYWLGE 198

Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
               LA  +++             A   F  V  +Y  ++   +++ +L +    L   D
Sbjct: 199 VN--LAKGDLQ------------GAGQAFARVSQSYPSSQKVPDSLYKLADVERRLGNND 244

Query: 245 EAREVVSLIQERYPQGYWARYVETLVK 271
           +A+ ++  +  +YP    A+  +  +K
Sbjct: 245 KAKGILQQVISQYPGTSAAQLAQRDLK 271


>gi|15596171|ref|NP_249665.1| hypothetical protein PA0974 [Pseudomonas aeruginosa PAO1]
 gi|254239322|ref|ZP_04932645.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|254245257|ref|ZP_04938579.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|5815421|gb|AAD52665.1|AF177774_2 periplasmic protein [Pseudomonas aeruginosa]
 gi|9946881|gb|AAG04363.1|AE004530_16 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
 gi|126171253|gb|EAZ56764.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|126198635|gb|EAZ62698.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
          Length = 274

 Score = 59.4 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 48/137 (35%), Gaps = 8/137 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D   ++  Y+ A   +K ++F KA + FN   R +P +  +  +      V  + G 
Sbjct: 146 EPGDPAKEKLYYDAAFDLIKSKDFDKASQAFNAFLRKYPNSQYSGNAQYWLGEVNLAKGD 205

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            Q A          YP S+ V    Y +         DV             + +++ +Y
Sbjct: 206 LQGAGQAFARVSQSYPSSQKVPDSLYKLA--------DVERRLGNNDKAKGILQQVISQY 257

Query: 170 TNSPYVKGARFYVTVGR 186
             +   + A+  +   R
Sbjct: 258 PGTSAAQLAQRDLKNLR 274



 Score = 58.6 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 57/147 (38%), Gaps = 22/147 (14%)

Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
           P     + +YY        +I+   +D        Q  +  + +Y NS Y   A++++  
Sbjct: 147 PGDPAKEKLYYDAA---FDLIKSKDFD-----KASQAFNAFLRKYPNSQYSGNAQYWLGE 198

Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
               LA  +++             A   F  V  +Y  ++   +++ +L +    L   D
Sbjct: 199 VN--LAKGDLQ------------GAGQAFARVSQSYPSSQKVPDSLYKLADVERRLGNND 244

Query: 245 EAREVVSLIQERYPQGYWARYVETLVK 271
           +A+ ++  +  +YP    A+  +  +K
Sbjct: 245 KAKGILQQVISQYPGTSAAQLAQRDLK 271


>gi|307130111|ref|YP_003882127.1| SecB-dependent secretory protein [Dickeya dadantii 3937]
 gi|306527640|gb|ADM97570.1| SecB-dependent secretory protein [Dickeya dadantii 3937]
          Length = 274

 Score = 59.4 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 46/126 (36%), Gaps = 9/126 (7%)

Query: 61  YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A    L+++ + +A   F    + +P +     +      + Y+ GK   AA     
Sbjct: 157 YNTAASLVLEKKQYDQAIVAFQNFVKKYPDSTYQPNANYWLGQLFYNKGKKDDAAYYFAN 216

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       + VG+        +  ++  T        ++V+ Y N+   K A+
Sbjct: 217 VVKNYPKSPKASEAMFKVGV--------IMQEKGQTDKAKAVYQQVVKTYPNTDGAKQAQ 268

Query: 180 FYVTVG 185
             +   
Sbjct: 269 KRLAGL 274



 Score = 56.7 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 47/131 (35%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  +++     +      V++Y +S Y   A +++               
Sbjct: 153 ANTDYNTAASLVLEKKQYDQAIVAFQNFVKKYPDSTYQPNANYWLGQL------------ 200

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
            +Y K  +  AA   F  V+ NY  +  A EAM ++          D+A+ V   + + Y
Sbjct: 201 -FYNKGKKDDAA-YYFANVVKNYPKSPKASEAMFKVGVIMQEKGQTDKAKAVYQQVVKTY 258

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 259 PNTDGAKQAQK 269



 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 47/127 (37%), Gaps = 22/127 (17%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +Y QA    + ++ +YP+S       Y +G  +    +              Y + +V+
Sbjct: 168 KQYDQAIVAFQNFVKKYPDSTYQPNANYWLGQLFYNKGKKDD--------AAYYFANVVK 219

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y  SP    A F V V                 ++G+   A   +Q V+  Y + + A+
Sbjct: 220 NYPKSPKASEAMFKVGVIMQ--------------EKGQTDKAKAVYQQVVKTYPNTDGAK 265

Query: 228 EAMARLV 234
           +A  RL 
Sbjct: 266 QAQKRLA 272


>gi|289548649|ref|YP_003473637.1| hypothetical protein Thal_0878 [Thermocrinis albus DSM 14484]
 gi|289182266|gb|ADC89510.1| Tetratricopeptide TPR_2 repeat protein [Thermocrinis albus DSM
           14484]
          Length = 850

 Score = 59.4 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 70/202 (34%), Gaps = 44/202 (21%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +A+ +   +N+ +      +  R         ++ L+ A      G   +A S     
Sbjct: 435 YYRALAYFNMKNYKEVITTLEKDDRL--------QARLLKAEAYLLLGNPAKARSYL--- 483

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
                 +   D   YL+G+SY          +      +++ SR+ E   +SP    A  
Sbjct: 484 ------TPQTDRELYLLGLSYFM--------EEDYNKAVEFFSRVPE---SSPLRPQALL 526

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY-VA 239
            +              G  +   G+   A   ++ V+  Y D  +A +A   L+EA    
Sbjct: 527 KM--------------GDAFYNMGDLSKAQETYRKVIEEYPDTPYARQATLALLEAKPTN 572

Query: 240 LALMDEAREVVSLIQERYPQGY 261
           + +  E + +   +++  P   
Sbjct: 573 MNIEQETKLIEDYLKKD-PDSP 593



 Score = 51.3 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 56/131 (42%), Gaps = 11/131 (8%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           +  RE+Y   + +  E++++KA E+F++       + +  ++LL      Y+ G   +A 
Sbjct: 486 QTDRELYLLGLSYFMEEDYNKAVEFFSRVPES---SPLRPQALLKMGDAFYNMGDLSKAQ 542

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
               + I +YP++           ++  +        ++ TKL+  Y+    ++  +SP 
Sbjct: 543 ETYRKVIEEYPDTPYARQA----TLALLEAKPTNMNIEQETKLIEDYL----KKDPDSPT 594

Query: 175 VKGARFYVTVG 185
            +  +  +   
Sbjct: 595 AQHLKLQLAKL 605



 Score = 42.0 bits (98), Expect = 0.095,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 56/139 (40%), Gaps = 19/139 (13%)

Query: 135 YLVGMSYAQM------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           Y   ++Y  M      I  +  D R    +L+  + ++           AR Y+T   ++
Sbjct: 435 YYRALAYFNMKNYKEVITTLEKDDRLQARLLKAEAYLLLGNP-----AKARSYLTPQTDR 489

Query: 189 LAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
               E+ + G  Y    +Y  A+  F  V  +   +    +A+ ++ +A+  +  + +A+
Sbjct: 490 ----ELYLLGLSYFMEEDYNKAVEFFSRVPES---SPLRPQALLKMGDAFYNMGDLSKAQ 542

Query: 248 EVVSLIQERYPQGYWARYV 266
           E    + E YP   +AR  
Sbjct: 543 ETYRKVIEEYPDTPYARQA 561


>gi|88810550|ref|ZP_01125807.1| hypothetical protein NB231_15758 [Nitrococcus mobilis Nb-231]
 gi|88792180|gb|EAR23290.1| hypothetical protein NB231_15758 [Nitrococcus mobilis Nb-231]
          Length = 275

 Score = 59.4 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 54/135 (40%), Gaps = 8/135 (5%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D   ++  YE+A   L++  ++++ + F++    +P +  A  +        Y    + Q
Sbjct: 146 DSSEEQTAYERAFNTLRDGRYARSQQEFHEFLHHYPDSQYADNARYWLGESYYVERHFDQ 205

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A    ++ +  +P S         +G         + ++Q       + + ++++RY NS
Sbjct: 206 AMQQFQKVLDDFPHSGKRPGAQLKIG--------FIQHEQGKLDRARKTLGKVIQRYPNS 257

Query: 173 PYVKGARFYVTVGRN 187
                A+  + +  N
Sbjct: 258 TAANLAQQRLRLIGN 272



 Score = 54.0 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 46/119 (38%), Gaps = 15/119 (12%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            +   +   D R  +   Q     +  Y +S Y   AR+++                YY+
Sbjct: 154 YERAFNTLRDGRYAR-SQQEFHEFLHHYPDSQYADNARYWLGE-------------SYYV 199

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           +R  +  A+ +FQ VL ++  +     A  ++         +D AR+ +  + +RYP  
Sbjct: 200 ER-HFDQAMQQFQKVLDDFPHSGKRPGAQLKIGFIQHEQGKLDRARKTLGKVIQRYPNS 257


>gi|117923779|ref|YP_864396.1| hypothetical protein Mmc1_0465 [Magnetococcus sp. MC-1]
 gi|117607535|gb|ABK42990.1| Tetratricopeptide TPR_2 repeat protein [Magnetococcus sp. MC-1]
          Length = 377

 Score = 59.4 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 20/138 (14%), Positives = 51/138 (36%), Gaps = 8/138 (5%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
              +      +E Y++A L++    + +A E F+   + +    +A  +      + Y  
Sbjct: 240 PKVLPQATNAKEAYDQAKLYVTSGQYDRAQELFDGFLKQYGSDPLADNAQYWLGEMHYVQ 299

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
             ++ A       + ++P S  V      +G S+ ++           +   + + ++V+
Sbjct: 300 RNFRSALVEFNNVLVKWPNSGKVPDSLLKIGFSFYEL--------EDYENARRALEQLVQ 351

Query: 168 RYTNSPYVKGARFYVTVG 185
            Y N+  V  A   +   
Sbjct: 352 NYPNANAVPLAMQRLKRI 369



 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 51/137 (37%), Gaps = 22/137 (16%)

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
             A +  ++G+Y +A  L + ++ QY      D   Y +G  +          QR  +  
Sbjct: 254 DQAKLYVTSGQYDRAQELFDGFLKQYGSDPLADNAQYWLGEMHYV--------QRNFRSA 305

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
           L   + ++ ++ NS  V  +   +                +Y +  +Y  A    + ++ 
Sbjct: 306 LVEFNNVLVKWPNSGKVPDSLLKIGF-------------SFY-ELEDYENARRALEQLVQ 351

Query: 219 NYSDAEHAEEAMARLVE 235
           NY +A     AM RL  
Sbjct: 352 NYPNANAVPLAMQRLKR 368



 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 44/103 (42%), Gaps = 14/103 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              +     +++Y + P    A++++          E+     Y++R  + +A+  F  V
Sbjct: 267 RAQELFDGFLKQYGSDPLADNAQYWLG---------EMH----YVQR-NFRSALVEFNNV 312

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           L  + ++    +++ ++  ++  L   + AR  +  + + YP 
Sbjct: 313 LVKWPNSGKVPDSLLKIGFSFYELEDYENARRALEQLVQNYPN 355


>gi|222111171|ref|YP_002553435.1| tol-pal system protein ybgf [Acidovorax ebreus TPSY]
 gi|221730615|gb|ACM33435.1| tol-pal system protein YbgF [Acidovorax ebreus TPSY]
          Length = 261

 Score = 59.4 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 49/132 (37%), Gaps = 8/132 (6%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
             ++  +E A+   +   F +A   F+   R +P +G    +       QY+   Y++A 
Sbjct: 138 PAEKRDFEAALALFRAGKFGEASNAFSGFVRQYPQSGYVPSARFWLGNAQYATRDYKEAI 197

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
           +  +  ++  P+            +S    I +   + + T+   + +  ++  Y  S  
Sbjct: 198 NNFKALLSAAPDHARAPEA----ALS----IANCQIELKDTRAARKTLEDLLRVYPQSEA 249

Query: 175 VKGARFYVTVGR 186
              A+  +   +
Sbjct: 250 AAAAKERLARLK 261



 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 37/105 (35%), Gaps = 14/105 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                 S  V +Y  S YV  ARF++   +                  +Y  AI  F+ +
Sbjct: 158 EASNAFSGFVRQYPQSGYVPSARFWLGNAQ--------------YATRDYKEAINNFKAL 203

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           L+   D   A EA   +    + L     AR+ +  +   YPQ  
Sbjct: 204 LSAAPDHARAPEAALSIANCQIELKDTRAARKTLEDLLRVYPQSE 248



 Score = 44.3 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 49/143 (34%), Gaps = 22/143 (15%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           A K    +A   + AGK+ +A++    ++ QYP+S  V    + +G +            
Sbjct: 139 AEKRDFEAALALFRAGKFGEASNAFSGFVRQYPQSGYVPSARFWLGNAQYAT-------- 190

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           R  K  +     ++    +      A   +   + +L               +  AA   
Sbjct: 191 RDYKEAINNFKALLSAAPDHARAPEAALSIANCQIEL--------------KDTRAARKT 236

Query: 213 FQLVLANYSDAEHAEEAMARLVE 235
            + +L  Y  +E A  A  RL  
Sbjct: 237 LEDLLRVYPQSEAAAAAKERLAR 259


>gi|34541292|ref|NP_905771.1| TPR domain-containing protein [Porphyromonas gingivalis W83]
 gi|34397608|gb|AAQ66670.1| TPR domain protein [Porphyromonas gingivalis W83]
          Length = 995

 Score = 59.4 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/225 (17%), Positives = 76/225 (33%), Gaps = 50/225 (22%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +YEK    +     + A E FN   +  P +  AR+S L    + Y+ G+ ++A    + 
Sbjct: 621 LYEKGCGAVLSGKHNVAEEAFNAVVKRSPDSREARQSSLQLGLLYYNTGRTKEAIRTYQR 680

Query: 120 YITQYPESKNV------------------DYVYYLVGMSYAQMIRDVPYDQ--------- 152
            I +YP S+                    +Y  Y+ G+     I     +Q         
Sbjct: 681 IIDRYPRSEETTVALSDLRSIYLEEDRIDEYSTYVRGLKDKVSIAPSETEQLGFLSAERK 740

Query: 153 --RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
             R      + +   +ERY        A              E+ +     + G   AA 
Sbjct: 741 YRRRQPDARRDLEAYLERYPQGSDRHKA--------------ELYLADLDYQAGNADAAY 786

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALA-LMDEAREVVSLIQ 254
            R+  ++    ++    E     ++A + L  +  E +E  + +Q
Sbjct: 787 NRYSRLV----NSPGLPE--DYKIDARLRLGRMQYERKEYKAALQ 825



 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 57/206 (27%), Gaps = 25/206 (12%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG-VARKSLLMSAFVQYSAGKYQQAAS 115
               Y         + +  A E F +       A  ++  +       +Y    +  A  
Sbjct: 508 PLGYYRLGYSLFNAERYDMALEAFKEYVSRSGIAPNLSADAYARIGDCRYMKRDFHGARE 567

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
                   YP     DY               +    +     +Q + +++  + +S ++
Sbjct: 568 AYSMAYRVYPSG--GDYALLRRA--------RLEGLAKQYADQIQTLDKLIREFPDSRHL 617

Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
             A  Y       L+ K   +                F  V+    D+  A ++  +L  
Sbjct: 618 T-AALYEKGCGAVLSGKH-NVAE------------EAFNAVVKRSPDSREARQSSLQLGL 663

Query: 236 AYVALALMDEAREVVSLIQERYPQGY 261
            Y       EA      I +RYP+  
Sbjct: 664 LYYNTGRTKEAIRTYQRIIDRYPRSE 689



 Score = 40.9 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 32/240 (13%), Positives = 61/240 (25%), Gaps = 60/240 (25%)

Query: 75  KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
            A          +P      K+ L  A + Y AG    A +    Y      S  +   Y
Sbjct: 747 DARRDLEAYLERYPQGSDRHKAELYLADLDYQAGN---ADAAYNRYSRLV-NSPGLPEDY 802

Query: 135 -----------------YLVGMSYAQMIRDVP-----YDQ-----RATKLMLQYMSRIVE 167
                            Y   +   Q + D        DQ       +    +   R+++
Sbjct: 803 KIDARLRLGRMQYERKEYKAALQSFQSVLDTDGAEAVRDQAVQGVTESAYADKDYRRVID 862

Query: 168 ---------RYTNSP--YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA------- 209
                       ++   Y   +   + + R  +A  E+    +    G   A        
Sbjct: 863 VIAGLKNQAALPHTLRLYRAKSYQALKMNREAIADYELLAEDFSTATGA-EAVVMQAQLE 921

Query: 210 --IPR---FQLVLANY-----SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
               R    + +L  +                 L + Y        AR+ +  +++ YP 
Sbjct: 922 MEAKRLSKAKSILEKFIAKSTPQQYWLARGFILLSDIYKKEGDTFTARQYLESLEKNYPN 981


>gi|225849933|ref|YP_002730167.1| Tetratricopeptide repeat family protein [Persephonella marina
           EX-H1]
 gi|225645117|gb|ACO03303.1| Tetratricopeptide repeat family protein [Persephonella marina
           EX-H1]
          Length = 228

 Score = 59.4 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 51/153 (33%), Gaps = 25/153 (16%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
                + V      +E+Y+ A+    +    +A +YF     ++P + +   +L      
Sbjct: 89  EKEGAEKVRIPDNPKELYKYALNAYYKGKTEEARKYFQIFVEEYPGSDMYDNALFWIGQT 148

Query: 104 QYSAGKYQQAASLGEEYI-----------TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
            Y+ G Y++A    +  I            +YP              SY ++        
Sbjct: 149 YYTEGDYEKAIEAFDRLINDCETGKAQECNKYPV------AMLKKAYSYIKL-------- 194

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
              +   + +  IV R+ ++   + A   + V 
Sbjct: 195 GEIEEAKKLLKEIVRRFPDTEESELASRKLEVL 227



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 19/112 (16%)

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
           T+   +Y    VE Y  S     A                 IG+ Y   G+Y  AI  F 
Sbjct: 118 TEEARKYFQIFVEEYPGSDMYDNAL--------------FWIGQTYYTEGDYEKAIEAFD 163

Query: 215 LVLANYSDAEH-----AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            ++ +    +         AM +   +Y+ L  ++EA++++  I  R+P   
Sbjct: 164 RLINDCETGKAQECNKYPVAMLKKAYSYIKLGEIEEAKKLLKEIVRRFPDTE 215



 Score = 40.9 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 45/127 (35%), Gaps = 18/127 (14%)

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y  GK ++A    + ++ +YP S   D   + +G +Y          +   +  ++  
Sbjct: 112 AYYK-GKTEEARKYFQIFVEEYPGSDMYDNALFWIGQTYYT--------EGDYEKAIEAF 162

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
            R++    N      A+         L          Y+K GE   A    + ++  + D
Sbjct: 163 DRLI----NDCETGKAQECNKYPVAMLKK-----AYSYIKLGEIEEAKKLLKEIVRRFPD 213

Query: 223 AEHAEEA 229
            E +E A
Sbjct: 214 TEESELA 220


>gi|146310898|ref|YP_001175972.1| tol-pal system protein YbgF [Enterobacter sp. 638]
 gi|145317774|gb|ABP59921.1| Tetratricopeptide TPR_2 repeat protein [Enterobacter sp. 638]
          Length = 264

 Score = 59.4 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 45/123 (36%), Gaps = 9/123 (7%)

Query: 61  YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A+  +++++    A   F    + +P +     +      + Y+ GK   AA     
Sbjct: 146 YNAAIALVQDKSRQDDAIAAFQSFVKKYPDSTYQPNANYWLGQLNYNKGKKDDAAFYFAS 205

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       + VG+        +  D+  T        ++V +Y  +   K A+
Sbjct: 206 VVKNYPKSPKASDAMFKVGV--------IMQDKGDTAKAKAVYQQVVSKYPGTEGAKQAQ 257

Query: 180 FYV 182
             +
Sbjct: 258 KRL 260



 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 44/131 (33%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      V++Y +S Y   A +++               
Sbjct: 142 ANTDYNAAIALVQDKSRQDDAIAAFQSFVKKYPDSTYQPNANYWLGQLN----------- 190

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
             Y K  +  AA   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 191 --YNKGKKDDAAFY-FASVVKNYPKSPKASDAMFKVGVIMQDKGDTAKAKAVYQQVVSKY 247

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 248 PGTEGAKQAQK 258



 Score = 49.0 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 43/123 (34%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A +  + ++ +YP+S       Y +G       +              Y + +V+ Y 
Sbjct: 160 DDAIAAFQSFVKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAFYFASVVKNYP 211

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A F V V                  +G+   A   +Q V++ Y   E A++A 
Sbjct: 212 KSPKASDAMFKVGVIMQ--------------DKGDTAKAKAVYQQVVSKYPGTEGAKQAQ 257

Query: 231 ARL 233
            RL
Sbjct: 258 KRL 260


>gi|28198798|ref|NP_779112.1| hypothetical protein PD0896 [Xylella fastidiosa Temecula1]
 gi|182681497|ref|YP_001829657.1| tol-pal system protein YbgF [Xylella fastidiosa M23]
 gi|28056889|gb|AAO28761.1| conserved hypothetical protein [Xylella fastidiosa Temecula1]
 gi|182631607|gb|ACB92383.1| tol-pal system protein YbgF [Xylella fastidiosa M23]
          Length = 271

 Score = 59.4 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 49/154 (31%), Gaps = 10/154 (6%)

Query: 39  ERQSSRDVYLDSVTDVRYQRE--VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
             + S +V+ D+        E   Y  A   LK   ++ A E F    + +P       +
Sbjct: 124 MSEQSPNVHGDASALTISNEERIAYNVAFDALKNSKYADAAELFMSFLQLYPNGVYTPNA 183

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
           L       Y+   +  A +     +++YP             +  A   ++         
Sbjct: 184 LYWLGESYYAMHDFVSAEAQFRTLLSRYPTHDKASGSLLKEALCQANQGKN--------D 235

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
                + +++ +Y  +   + A+  +   +   A
Sbjct: 236 AAQHSLEQVLSQYPGTDAARLAQERLQSMKLSQA 269



 Score = 42.4 bits (99), Expect = 0.070,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 42/115 (36%), Gaps = 14/115 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              +     ++ Y N  Y   A +++              G  Y    ++V+A  +F+ +
Sbjct: 162 DAAELFMSFLQLYPNGVYTPNALYWL--------------GESYYAMHDFVSAEAQFRTL 207

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           L+ Y   + A  ++ +           D A+  +  +  +YP    AR  +  ++
Sbjct: 208 LSRYPTHDKASGSLLKEALCQANQGKNDAAQHSLEQVLSQYPGTDAARLAQERLQ 262



 Score = 40.1 bits (93), Expect = 0.31,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 23/58 (39%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           LK  +Y  A   F   L  Y +  +   A+  L E+Y A+     A      +  RYP
Sbjct: 155 LKNSKYADAAELFMSFLQLYPNGVYTPNALYWLGESYYAMHDFVSAEAQFRTLLSRYP 212


>gi|283784495|ref|YP_003364360.1| tetratricopeptide repeat exported protein [Citrobacter rodentium
           ICC168]
 gi|282947949|emb|CBG87513.1| putative tetratricopeptide repeat exported protein [Citrobacter
           rodentium ICC168]
          Length = 263

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 45/123 (36%), Gaps = 9/123 (7%)

Query: 61  YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A+  +++++    A   F    + +P +     +      + Y+ GK   AA     
Sbjct: 146 YNAAIALVQDKSRQDDAIAAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFAS 205

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       + VG+        +  D+  T        +++ +Y  +   K A+
Sbjct: 206 VVKNYPKSPKAADAMFKVGV--------IMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257

Query: 180 FYV 182
             +
Sbjct: 258 KRL 260



 Score = 51.7 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      +++Y +S Y   A +++              G
Sbjct: 142 ANTDYNAAIALVQDKSRQDDAIAAFQNFIKKYPDSTYQPNANYWL--------------G 187

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           +    +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 188 QLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 247

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 248 PGTDGAKQAQK 258



 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 43/123 (34%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A +  + +I +YP+S       Y +G       +              Y + +V+ Y 
Sbjct: 160 DDAIAAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A F V V                  +G+   A   +Q V++ Y   + A++A 
Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257

Query: 231 ARL 233
            RL
Sbjct: 258 KRL 260


>gi|218893055|ref|YP_002441924.1| hypothetical protein PLES_43401 [Pseudomonas aeruginosa LESB58]
 gi|218773283|emb|CAW29095.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58]
          Length = 274

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 48/137 (35%), Gaps = 8/137 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D   ++  Y+ A   +K ++F KA + FN   R +P +  +  +      V  + G 
Sbjct: 146 EPGDPAKEKLYYDAAFDLIKSKDFDKASQAFNAFLRKYPNSQYSGNAQYWLGEVNLAKGD 205

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            Q A          YP S+ V    Y +         DV             + +++ +Y
Sbjct: 206 LQGAGQAFARVSQSYPSSQKVPDSLYKLA--------DVERRLGNNDKAKGILQQVISQY 257

Query: 170 TNSPYVKGARFYVTVGR 186
             +   + A+  +   R
Sbjct: 258 PGTSAAQLAQRDLKNLR 274



 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 57/147 (38%), Gaps = 22/147 (14%)

Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
           P     + +YY        +I+   +D        Q  +  + +Y NS Y   A++++  
Sbjct: 147 PGDPAKEKLYYDAA---FDLIKSKDFD-----KASQAFNAFLRKYPNSQYSGNAQYWLGE 198

Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
               LA  +++             A   F  V  +Y  ++   +++ +L +    L   D
Sbjct: 199 VN--LAKGDLQ------------GAGQAFARVSQSYPSSQKVPDSLYKLADVERRLGNND 244

Query: 245 EAREVVSLIQERYPQGYWARYVETLVK 271
           +A+ ++  +  +YP    A+  +  +K
Sbjct: 245 KAKGILQQVISQYPGTSAAQLAQRDLK 271


>gi|83814353|ref|YP_445962.1| TPR repeat-containing protein [Salinibacter ruber DSM 13855]
 gi|83755747|gb|ABC43860.1| tetratricopeptide repeat domain protein [Salinibacter ruber DSM
           13855]
          Length = 627

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 72/223 (32%), Gaps = 28/223 (12%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                 +   Y++  + +   +  +A   F++ + +   + +A ++    A + +  G++
Sbjct: 402 PETTAAEEGQYQRGRIAVLRDSLDRARLLFSRLAANAQSSDLADQAQYELALLHFYQGEF 461

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGM--------SYAQMIRDVPY-----DQRATKL 157
              A+     I++ P +   +    L  +        S    +R          Q A   
Sbjct: 462 DATAARAAS-ISENPSADVANDAIALKTLLQEARGPDSLDTPLRTFARVRLHERQHAYGR 520

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
            L  +  ++ R+   P    ARF        LA  +              AA+  F+ V 
Sbjct: 521 ALDSLDALLRRHPRHPLADDARFRRANI--HLARHDTS------------AALTAFRAVP 566

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
             +  +  A+ ++ R      A      A E    +   YP  
Sbjct: 567 ERHPRSPFADRSLFRSASLLEANGRPAAAVETYDRLLSEYPTS 609



 Score = 49.0 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 68/214 (31%), Gaps = 49/214 (22%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK-------- 109
           + ++  A      Q +  A          +P +GVA ++  +   +              
Sbjct: 283 QILFGFARRAADAQRYGVATRACEAIQEQYPRSGVAPEAQKLRGDLYRRWADQGADSTTA 342

Query: 110 ------YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
                 Y +A +  + ++ + P   +       +G       R++           + +S
Sbjct: 343 AQDSVRYARARTAYKTFLRENPGHADYPAALLRLGTLQIDAYRNLD-------DAQETLS 395

Query: 164 RIVERYTNSPYVKGARF---YVTVGRNQL----------------------AAKEVEIGR 198
           ++V  +  +   +  ++    + V R+ L                      A  E+ +  
Sbjct: 396 QLVSNHPETTAAEEGQYQRGRIAVLRDSLDRARLLFSRLAANAQSSDLADQAQYELALLH 455

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
           +Y   GE+ A   R   +  N   A+ A +A+A 
Sbjct: 456 FYQ--GEFDATAARAASISEN-PSADVANDAIAL 486



 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 35/120 (29%), Gaps = 22/120 (18%)

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y +A    +  + ++P     D   +     +             T   L     + ER+
Sbjct: 518 YGRALDSLDALLRRHPRHPLADDARFRRANIHLARHD--------TSAALTAFRAVPERH 569

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
             SP+   + F                       G   AA+  +  +L+ Y  +  A +A
Sbjct: 570 PRSPFADRSLFRSASLLEA--------------NGRPAAAVETYDRLLSEYPTSLLAGDA 615



 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 15/106 (14%), Positives = 33/106 (31%), Gaps = 8/106 (7%)

Query: 73  FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
           + +A +  +   R  P   +A  +    A +  +      A +       ++P S   D 
Sbjct: 518 YGRALDSLDALLRRHPRHPLADDARFRRANIHLARHDTSAALTAFRAVPERHPRSPFAD- 576

Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
                  S  +    +  + R     ++   R++  Y  S     A
Sbjct: 577 ------RSLFRSASLLEANGRPA-AAVETYDRLLSEYPTSLLAGDA 615


>gi|71736705|ref|YP_275905.1| hypothetical protein PSPPH_3765 [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|298488201|ref|ZP_07006237.1| tol-pal system protein [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|71557258|gb|AAZ36469.1| conserved hypothetical protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|298157259|gb|EFH98343.1| tol-pal system protein [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
          Length = 272

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 8/136 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D   ++  YE A   +K ++F KA + F    R +P +  A  +      V  + G 
Sbjct: 145 EPPDPTKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 204

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            Q A     +   QYP+   V    Y +         DV      T  +   + ++V +Y
Sbjct: 205 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 256

Query: 170 TNSPYVKGARFYVTVG 185
             +   + A+  +   
Sbjct: 257 PGTSAAQLAQRDLQRL 272



 Score = 48.6 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
             +I+   +D        Q  +  + +Y NS Y   A++++      LA  +++      
Sbjct: 160 FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 206

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
                  A   F  V   Y       +++ +L +    L   D+ + ++  +  +YP   
Sbjct: 207 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 260

Query: 262 WARYVETLVK 271
            A+  +  ++
Sbjct: 261 AAQLAQRDLQ 270


>gi|237730723|ref|ZP_04561204.1| tetratricopeptide TPR_2 repeat protein [Citrobacter sp. 30_2]
 gi|226906262|gb|EEH92180.1| tetratricopeptide TPR_2 repeat protein [Citrobacter sp. 30_2]
          Length = 263

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 46/123 (37%), Gaps = 9/123 (7%)

Query: 61  YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A+  +++++    A E F    + +P +     +      + Y+ GK   AA     
Sbjct: 146 YNAAIALVQDKSRQDDAIEAFQNFIKKYPDSTYLPNANYWLGQLNYNKGKKDDAAFYFAS 205

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  +P+S       Y VG+        +  D+   +       +++ +Y  +   K A+
Sbjct: 206 VVKNFPKSPKAADAMYKVGV--------IMQDKGDKEKAKAVYQQVITKYPGTDGAKQAQ 257

Query: 180 FYV 182
             +
Sbjct: 258 KRL 260



 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 47/131 (35%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      ++     +++Y +S Y+  A +++               
Sbjct: 142 ANTDYNAAIALVQDKSRQDDAIEAFQNFIKKYPDSTYLPNANYWLGQLN----------- 190

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
             Y K  +  AA   F  V+ N+  +  A +AM ++          ++A+ V   +  +Y
Sbjct: 191 --YNKGKKDDAAFY-FASVVKNFPKSPKAADAMYKVGVIMQDKGDKEKAKAVYQQVITKY 247

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 248 PGTDGAKQAQK 258



 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 40/123 (32%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I +YP+S  +    Y +G       +              Y + +V+ + 
Sbjct: 160 DDAIEAFQNFIKKYPDSTYLPNANYWLGQLNYNKGKKDD--------AAFYFASVVKNFP 211

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A + V V       KE     Y              Q V+  Y   + A++A 
Sbjct: 212 KSPKAADAMYKVGVIMQDKGDKEKAKAVY--------------QQVITKYPGTDGAKQAQ 257

Query: 231 ARL 233
            RL
Sbjct: 258 KRL 260


>gi|56476930|ref|YP_158519.1| hypothetical protein ebA2654 [Aromatoleum aromaticum EbN1]
 gi|56312973|emb|CAI07618.1| hypothetical protein ebA2654 [Aromatoleum aromaticum EbN1]
          Length = 246

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 48/122 (39%), Gaps = 8/122 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YE A+  LKE  +  A   F Q  R  P +     +   +      A +   A++     
Sbjct: 129 YEAALNLLKEGRYKDALTGFEQFIRQHPQSTFLPGAHFWAGNAALQAKEVAAASTYFNTV 188

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +  +P+         ++G++ +Q           TK   + + ++VER+ +S   + AR 
Sbjct: 189 LKTWPQDAAAPDA--MLGLANSQQALG------DTKTSQETLKKLVERFPDSSAAQAARQ 240

Query: 181 YV 182
            +
Sbjct: 241 RL 242



 Score = 53.6 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 14/106 (13%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           K  L    + + ++  S ++ GA  +   G   L AKEV     Y            F  
Sbjct: 142 KDALTGFEQFIRQHPQSTFLPGA--HFWAGNAALQAKEVAAASTY------------FNT 187

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           VL  +     A +AM  L  +  AL     ++E +  + ER+P   
Sbjct: 188 VLKTWPQDAAAPDAMLGLANSQQALGDTKTSQETLKKLVERFPDSS 233


>gi|261380689|ref|ZP_05985262.1| putative periplasmic protein [Neisseria subflava NJ9703]
 gi|284796400|gb|EFC51747.1| putative periplasmic protein [Neisseria subflava NJ9703]
          Length = 251

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 50/134 (37%), Gaps = 13/134 (9%)

Query: 48  LDSVTDVRYQREV--YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
           + S TD   Q E+  Y +A  + +  N+S A     +       + +AR+++ +    Q 
Sbjct: 121 VPSETDSAAQNELRLYNQAQKYYQRNNYSAAVAILKEADGGN-GSEIARRNMYLLLQSQQ 179

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSR 164
             G  +    +G  Y  ++  S       Y +G    +   +D+               +
Sbjct: 180 RLGNCESVIEIGNRYANRFRNSPQAPDAMYSIGQCQYKLQQKDIAR---------STWRK 230

Query: 165 IVERYTNSPYVKGA 178
           +++ + NS   K A
Sbjct: 231 LIQSFPNSEAAKRA 244



 Score = 43.6 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 20/150 (13%), Positives = 42/150 (28%), Gaps = 48/150 (32%)

Query: 170 TNSPYVKGARFYVTVG---------RNQLAAKEVEI---GRYYLKRGEYVAA-------- 209
             +  +   +  +             +  A  E+ +    + Y +R  Y AA        
Sbjct: 100 PKAQRLDDRKLKMNYLANGGGVPSETDSAAQNELRLYNQAQKYYQRNNYSAAVAILKEAD 159

Query: 210 ------IPR---------------FQLVLA-------NYSDAEHAEEAMARLVEAYVALA 241
                 I R                + V+         + ++  A +AM  + +    L 
Sbjct: 160 GGNGSEIARRNMYLLLQSQQRLGNCESVIEIGNRYANRFRNSPQAPDAMYSIGQCQYKLQ 219

Query: 242 LMDEAREVVSLIQERYPQGYWARYVETLVK 271
             D AR     + + +P    A+     +K
Sbjct: 220 QKDIARSTWRKLIQSFPNSEAAKRASISLK 249


>gi|34495566|ref|NP_899781.1| hypothetical protein CV_0111 [Chromobacterium violaceum ATCC 12472]
 gi|34101421|gb|AAQ57790.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
           12472]
          Length = 246

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 39/113 (34%), Gaps = 8/113 (7%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+KA+  L+ ++F  A    +   +  P A  A ++         +  +Y  A  +   +
Sbjct: 130 YDKALNLLRARDFPNAINALSLFIQQNPQAPQAAEASYWLGVAHTALRQYDAAIDIHRRF 189

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
           + QYP +               + I +   D            R+++ Y  + 
Sbjct: 190 VEQYPNNHFAPDAL--------RNIGNCQRDLGQVDQAKNTYRRLIKLYPKTD 234



 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 39/105 (37%), Gaps = 14/105 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             +  +S  +++   +P    A +++ V    L               +Y AAI   +  
Sbjct: 144 NAINALSLFIQQNPQAPQAAEASYWLGVAHTAL--------------RQYDAAIDIHRRF 189

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +  Y +   A +A+  +      L  +D+A+     + + YP+  
Sbjct: 190 VEQYPNNHFAPDALRNIGNCQRDLGQVDQAKNTYRRLIKLYPKTD 234



 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 28/66 (42%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           L+  ++  AI    L +     A  A EA   L  A+ AL   D A ++     E+YP  
Sbjct: 137 LRARDFPNAINALSLFIQQNPQAPQAAEASYWLGVAHTALRQYDAAIDIHRRFVEQYPNN 196

Query: 261 YWARYV 266
           ++A   
Sbjct: 197 HFAPDA 202


>gi|307545158|ref|YP_003897637.1| hypothetical protein HELO_2568 [Halomonas elongata DSM 2581]
 gi|307217182|emb|CBV42452.1| hypothetical protein HELO_2568 [Halomonas elongata DSM 2581]
          Length = 268

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 43/119 (36%), Gaps = 14/119 (11%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           R      Q     ++ Y  S     A +++    +  A  E++            AA   
Sbjct: 160 RDFGAAKQAFQSFIDDYPQSGLTANAYYWLGELHS--AESELD------------AAADA 205

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           F  V+ +Y D+    +A+ +L          + +RE++  +Q  YP    A   +  ++
Sbjct: 206 FNRVIESYPDSNKVPDALYKLGLLKARQGDPEASRELLERVQNDYPDSSAANLADDFLR 264



 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 47/115 (40%), Gaps = 8/115 (6%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           RE Y+ A   ++ ++F  A + F     D+P +G+   +      +  +  +   AA   
Sbjct: 147 REAYQAAFAKVQARDFGAAKQAFQSFIDDYPQSGLTANAYYWLGELHSAESELDAAADAF 206

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
              I  YP+S  V    Y +G+  A+       D  A++     + R+   Y +S
Sbjct: 207 NRVIESYPDSNKVPDALYKLGLLKARQG-----DPEASRE---LLERVQNDYPDS 253


>gi|121594095|ref|YP_985991.1| hypothetical protein Ajs_1725 [Acidovorax sp. JS42]
 gi|120606175|gb|ABM41915.1| Tetratricopeptide TPR_2 repeat protein [Acidovorax sp. JS42]
          Length = 261

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 49/132 (37%), Gaps = 8/132 (6%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
             ++  +E A+   +   F +A   F+   R +P +G    +       QY+   Y++A 
Sbjct: 138 PAEKRDFEAALALFRAGKFGEASNAFSGFVRQYPQSGYVPSARFWLGNAQYATRDYKEAI 197

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
           +  +  ++  P+            +S    I +   + + T+   + +  ++  Y  S  
Sbjct: 198 NNFKALLSAAPDHARAPEA----ALS----IANCQIELKDTRAARKTLEDLLRVYPQSEA 249

Query: 175 VKGARFYVTVGR 186
              A+  +   +
Sbjct: 250 AAAAKERLARLK 261



 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 37/105 (35%), Gaps = 14/105 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                 S  V +Y  S YV  ARF++   +                  +Y  AI  F+ +
Sbjct: 158 EASNAFSGFVRQYPQSGYVPSARFWLGNAQ--------------YATRDYKEAINNFKAL 203

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           L+   D   A EA   +    + L     AR+ +  +   YPQ  
Sbjct: 204 LSAAPDHARAPEAALSIANCQIELKDTRAARKTLEDLLRVYPQSE 248



 Score = 44.3 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 49/143 (34%), Gaps = 22/143 (15%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           A K    +A   + AGK+ +A++    ++ QYP+S  V    + +G +            
Sbjct: 139 AEKRDFEAALALFRAGKFGEASNAFSGFVRQYPQSGYVPSARFWLGNAQYAT-------- 190

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           R  K  +     ++    +      A   +   + +L               +  AA   
Sbjct: 191 RDYKEAINNFKALLSAAPDHARAPEAALSIANCQIEL--------------KDTRAARKT 236

Query: 213 FQLVLANYSDAEHAEEAMARLVE 235
            + +L  Y  +E A  A  RL  
Sbjct: 237 LEDLLRVYPQSEAAAAAKERLAR 259


>gi|218777993|ref|YP_002429311.1| hypothetical protein Dalk_0133 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218759377|gb|ACL01843.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 616

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 78/228 (34%), Gaps = 37/228 (16%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
            D    R +  +A + L+ + +++A   + +  +  P      ++  + A   + A + +
Sbjct: 150 EDPDNVRVLLTRAAVLLQLKKWNEASAVYEKVLKTAPEES---QTYFLLAETYHKANQPE 206

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           +A S+ + +I   P S +V   ++ +G     M            L  Q     +    +
Sbjct: 207 KAISVYQRFIENLPNSPDVISAWFFIGRVAYNM--------GDYALAAQAFEETLLLKPD 258

Query: 172 SPYVKGARFYVTVGRNQLAAKE--------------------VEIGRYYLKRGEYVAAIP 211
                  +  +     +L   E                    + +G+YYL R E   A  
Sbjct: 259 FE---QVQLNLAEVYRELGNDEKVQAIYSKMMRDAPSNTLPYLGLGQYYLSRRELEKANE 315

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            F  +   +       + +A    +Y+      EA E+ S + ++ P 
Sbjct: 316 VFGKLREEHPQDPLVAKGIAH---SYMNNGYFAEAAEIFSALHKQTPN 360



 Score = 44.0 bits (103), Expect = 0.025,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 77/216 (35%), Gaps = 33/216 (15%)

Query: 47  YLDSVTDVRYQREVYEKAVLFL--KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           YLD       +    ++ +L +  ++ N+  A E      ++ P      + LL  A V 
Sbjct: 109 YLDKAIAKDPESRFLKQGLLEILVEKGNYQGALEESALLLKEDPDN---VRVLLTRAAVL 165

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
               K+ +A+++ E+ +   PE       Y+L+  +Y +  +         +  +    R
Sbjct: 166 LQLKKWNEASAVYEKVLKTAPEESQT---YFLLAETYHKANQ--------PEKAISVYQR 214

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
            +E   NSP V  A                 IGR     G+Y  A   F+  L    D E
Sbjct: 215 FIENLPNSPDVISAW--------------FFIGRVAYNMGDYALAAQAFEETLLLKPDFE 260

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
             +     L E Y  L   ++ + + S +    P  
Sbjct: 261 QVQ---LNLAEVYRELGNDEKVQAIYSKMMRDAPSN 293



 Score = 38.6 bits (89), Expect = 0.98,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 74/238 (31%), Gaps = 65/238 (27%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              +L  +   KA E F +   + P   +  K     A    + G + +A    E +   
Sbjct: 301 GQYYLSRRELEKANEVFGKLREEHPQDPLVAKG---IAHSYMNNGYFAEA---AEIFSAL 354

Query: 124 YPESKN-------VDYV----------------------YYLVGMSYAQMIRDVPYDQRA 154
           + ++ N       + Y                       YY  G+ Y+  +   P D  A
Sbjct: 355 HKQTPNDGELSYFLAYALESTGRKQEALEAYQSIPPKSSYYFQGLIYSAYLTGKPEDAMA 414

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI------------------ 196
               L+ +         + +V  A       + Q   KE+ +                  
Sbjct: 415 ALEALKAVESADHL--ETEFVIHASN----LQQQAGNKELAVKALTDRIEEEPDNINLLY 468

Query: 197 --GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM-DEAREVVS 251
             G  Y K+G+  A I   + VL    D     +A+  L   Y  L     EA+++V+
Sbjct: 469 SLGVLYDKQGDKQACIETMKQVLKIEPD---NADALNFLGYTYADLGQNLQEAKKLVA 523


>gi|218778835|ref|YP_002430153.1| tol-pal system protein YbgF [Desulfatibacillum alkenivorans AK-01]
 gi|218760219|gb|ACL02685.1| tol-pal system protein YbgF [Desulfatibacillum alkenivorans AK-01]
          Length = 276

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 45/131 (34%), Gaps = 8/131 (6%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
              E Y  A L  + +   KA   F     D P   +A  +        Y    Y +A  
Sbjct: 140 SPEEQYAGAYLHYQNREQDKAIRAFKAFLADNPDHDLADNAQYWIGEAYYDQKMYPEAIE 199

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
             ++ + +YP+          +G SY  +           +   +++ ++V  Y  S  V
Sbjct: 200 AFKQVVKKYPDQNKAPAALLKIGYSYLAVDN--------PEQASKFLRQVVTDYPFSDLV 251

Query: 176 KGARFYVTVGR 186
             A+  ++  +
Sbjct: 252 NKAQNKLSDLQ 262



 Score = 52.4 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 40/112 (35%), Gaps = 14/112 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             ++     +    +      A+++              IG  Y  +  Y  AI  F+ V
Sbjct: 159 KAIRAFKAFLADNPDHDLADNAQYW--------------IGEAYYDQKMYPEAIEAFKQV 204

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           +  Y D   A  A+ ++  +Y+A+   ++A + +  +   YP        + 
Sbjct: 205 VKKYPDQNKAPAALLKIGYSYLAVDNPEQASKFLRQVVTDYPFSDLVNKAQN 256



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 25/70 (35%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           +    D+          Y     +  ++ + +A E F Q  + +P    A  +LL   + 
Sbjct: 165 KAFLADNPDHDLADNAQYWIGEAYYDQKMYPEAIEAFKQVVKKYPDQNKAPAALLKIGYS 224

Query: 104 QYSAGKYQQA 113
             +    +QA
Sbjct: 225 YLAVDNPEQA 234


>gi|289829585|ref|ZP_06547145.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
          Length = 194

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 45/126 (35%), Gaps = 9/126 (7%)

Query: 61  YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A+  +++++    A   F    + +P +     +      + Y+ GK   AA     
Sbjct: 77  YNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFAS 136

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       Y VG+        +  D+  T        +++ +Y  +   K A+
Sbjct: 137 VVKNYPKSPKAADAMYKVGV--------IMQDKGDTAKAKAVYQQVINKYPGTDGAKQAQ 188

Query: 180 FYVTVG 185
             +   
Sbjct: 189 KRLNAM 194



 Score = 49.0 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      +++Y +S Y   A +++               
Sbjct: 73  ANTDYNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLN----------- 121

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
                +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 122 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVINKY 178

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 179 PGTDGAKQAQK 189



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I +YP+S       Y +G       +              Y + +V+ Y 
Sbjct: 91  DDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 142

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A + V V                  +G+   A   +Q V+  Y   + A++A 
Sbjct: 143 KSPKAADAMYKVGVIMQ--------------DKGDTAKAKAVYQQVINKYPGTDGAKQAQ 188

Query: 231 ARL 233
            RL
Sbjct: 189 KRL 191


>gi|332528332|ref|ZP_08404332.1| hypothetical protein HGR_00485 [Hylemonella gracilis ATCC 19624]
 gi|332042203|gb|EGI78529.1| hypothetical protein HGR_00485 [Hylemonella gracilis ATCC 19624]
          Length = 291

 Score = 59.0 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 49/134 (36%), Gaps = 8/134 (5%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
            R +R  +E  +   ++ +F  A   F +  + +P +G A  +       QY+   Y++A
Sbjct: 152 ERAERRDFETGLGLFRKGDFPGAQNAFAEFIKRYPSSGYAPSAFFWLGNAQYATQDYKEA 211

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
                  ++Q  +          +     ++        + TK   + +  +++ Y  S 
Sbjct: 212 IENFRILLSQSQDHARAPEAVLAIANCQVEL--------KDTKGARKTLEELIKAYPKSD 263

Query: 174 YVKGARFYVTVGRN 187
               A+  +   ++
Sbjct: 264 AAATAKQRLPRLKD 277



 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 40/104 (38%), Gaps = 14/104 (13%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
                +  ++RY +S Y   A F++   +                  +Y  AI  F+++L
Sbjct: 174 AQNAFAEFIKRYPSSGYAPSAFFWLGNAQ--------------YATQDYKEAIENFRILL 219

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +   D   A EA+  +    V L     AR+ +  + + YP+  
Sbjct: 220 SQSQDHARAPEAVLAIANCQVELKDTKGARKTLEELIKAYPKSD 263



 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 35/106 (33%), Gaps = 11/106 (10%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK----EVEIGRYYLKRGEYV 207
           QR  K  L  +   V                  GR  LA +    + E G    ++G++ 
Sbjct: 120 QRQYKEALAALEERVR-------ALEPERVSVDGREFLAERAERRDFETGLGLFRKGDFP 172

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            A   F   +  Y  + +A  A   L  A  A     EA E   ++
Sbjct: 173 GAQNAFAEFIKRYPSSGYAPSAFFWLGNAQYATQDYKEAIENFRIL 218


>gi|311103959|ref|YP_003976812.1| tol-pal system protein YbgF [Achromobacter xylosoxidans A8]
 gi|310758648|gb|ADP14097.1| tol-pal system protein YbgF [Achromobacter xylosoxidans A8]
          Length = 229

 Score = 59.0 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 17/135 (12%), Positives = 47/135 (34%), Gaps = 8/135 (5%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
                ++  Y+ A+   ++  + +A E     +  +P + +A  +       +Y+   ++
Sbjct: 103 AGDPQEQAAYDGAIDLFRKGQYKEASESLAAFTALYPASQLAPSAQFYLGSSRYALKDFK 162

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            A       + + P++        ++  S  +M                 + RIV  Y  
Sbjct: 163 GAIEQLNAMVQKAPDNARAPDALLVIAGSQIEMNNRAG--------AKTTLQRIVRDYPT 214

Query: 172 SPYVKGARFYVTVGR 186
           +P    A+  + + +
Sbjct: 215 TPAASTAKSRLQLLQ 229



 Score = 39.3 bits (91), Expect = 0.63,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 40/116 (34%), Gaps = 14/116 (12%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           K   + ++     Y  S     A+FY+   R  L               ++  AI +   
Sbjct: 125 KEASESLAAFTALYPASQLAPSAQFYLGSSRYAL--------------KDFKGAIEQLNA 170

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           ++    D   A +A+  +  + + +     A+  +  I   YP    A   ++ ++
Sbjct: 171 MVQKAPDNARAPDALLVIAGSQIEMNNRAGAKTTLQRIVRDYPTTPAASTAKSRLQ 226


>gi|317153576|ref|YP_004121624.1| tol-pal system protein YbgF [Desulfovibrio aespoeensis Aspo-2]
 gi|316943827|gb|ADU62878.1| tol-pal system protein YbgF [Desulfovibrio aespoeensis Aspo-2]
          Length = 296

 Score = 59.0 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 47/129 (36%), Gaps = 8/129 (6%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
            +  Y+  +      +F  A   F++  + +   G+   +L       YS   Y QA   
Sbjct: 174 AQATYDAGLAKYNGGDFEGARGAFDEFLKKYSSDGLTPNALYWKGETYYSQKDYAQAILT 233

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            +E  ++YP+          +GMSY     D   D       + Y+  +VE +  S    
Sbjct: 234 FKEVTSRYPKHAKSASALLKIGMSY-----DRVGDPDN---AVFYLRALVEDFPKSAPAT 285

Query: 177 GARFYVTVG 185
            AR  +T  
Sbjct: 286 LARKELTRL 294



 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/143 (11%), Positives = 49/143 (34%), Gaps = 24/143 (16%)

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           + +  ++   +   +Y+ G ++ A    +E++ +Y          Y  G +Y        
Sbjct: 170 SAMGAQATYDAGLAKYNGGDFEGARGAFDEFLKKYSSDGLTPNALYWKGETYYS------ 223

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
             Q+     +     +  RY        A   + +  +++   +  +  +YL+       
Sbjct: 224 --QKDYAQAILTFKEVTSRYPKHAKSASALLKIGMSYDRVGDPDNAV--FYLR------- 272

Query: 210 IPRFQLVLANYSDAEHAEEAMAR 232
                 ++ ++   + A   +AR
Sbjct: 273 -----ALVEDFP--KSAPATLAR 288



 Score = 42.4 bits (99), Expect = 0.060,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 28/64 (43%)

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           G  Y  + +Y  AI  F+ V + Y     +  A+ ++  +Y  +   D A   +  + E 
Sbjct: 218 GETYYSQKDYAQAILTFKEVTSRYPKHAKSASALLKIGMSYDRVGDPDNAVFYLRALVED 277

Query: 257 YPQG 260
           +P+ 
Sbjct: 278 FPKS 281


>gi|206901168|ref|YP_002250157.1| TPR repeat protein [Dictyoglomus thermophilum H-6-12]
 gi|206740271|gb|ACI19329.1| TPR repeat protein [Dictyoglomus thermophilum H-6-12]
          Length = 153

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 32/77 (41%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
                E YEKA     E  + +A E + +  +D+P +  A  +    A        Y++A
Sbjct: 62  KTPDEEAYEKARDLYYEGKYKEAIEAYRKFLKDYPKSEYADDAQYEIALCYEFTEDYKKA 121

Query: 114 ASLGEEYITQYPESKNV 130
               E+ I  YP S+ V
Sbjct: 122 IEEYEKLIKNYPNSEYV 138



 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 37/83 (44%), Gaps = 8/83 (9%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y  GKY++A     +++  YP+S+  D   Y + + Y              K  ++   +
Sbjct: 76  YYEGKYKEAIEAYRKFLKDYPKSEYADDAQYEIALCYEFT--------EDYKKAIEEYEK 127

Query: 165 IVERYTNSPYVKGARFYVTVGRN 187
           +++ Y NS YV+ A+  +   + 
Sbjct: 128 LIKNYPNSEYVEAAKSSIEYLKE 150



 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 31/74 (41%), Gaps = 14/74 (18%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           K  ++   + ++ Y  S Y   A++ + +               Y    +Y  AI  ++ 
Sbjct: 82  KEAIEAYRKFLKDYPKSEYADDAQYEIALC--------------YEFTEDYKKAIEEYEK 127

Query: 216 VLANYSDAEHAEEA 229
           ++ NY ++E+ E A
Sbjct: 128 LIKNYPNSEYVEAA 141



 Score = 40.5 bits (94), Expect = 0.24,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 27/59 (45%)

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           G+Y  AI  ++  L +Y  +E+A++A   +   Y       +A E    + + YP   +
Sbjct: 79  GKYKEAIEAYRKFLKDYPKSEYADDAQYEIALCYEFTEDYKKAIEEYEKLIKNYPNSEY 137


>gi|28871115|ref|NP_793734.1| hypothetical protein PSPTO_3970 [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|28854365|gb|AAO57429.1| conserved protein of unknown function [Pseudomonas syringae pv.
           tomato str. DC3000]
          Length = 272

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 8/136 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D   ++  YE A   +K ++F KA + F    R +P +  A  +      V  + G 
Sbjct: 145 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 204

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            Q A     +   QYP+   V    Y +         DV      T  +   + ++V +Y
Sbjct: 205 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 256

Query: 170 TNSPYVKGARFYVTVG 185
             +   + A+  +   
Sbjct: 257 PGTSAAQLAQRDLQRL 272



 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
             +I+   +D        Q  +  + +Y NS Y   A++++      LA  +++      
Sbjct: 160 FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 206

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
                  A   F  V   Y       +++ +L +    L   D+ + ++  +  +YP   
Sbjct: 207 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 260

Query: 262 WARYVETLVK 271
            A+  +  ++
Sbjct: 261 AAQLAQRDLQ 270


>gi|251772666|gb|EES53230.1| TPR domain-containing protein [Leptospirillum ferrodiazotrophum]
          Length = 277

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 50/128 (39%), Gaps = 8/128 (6%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
                 +Y +A    +  ++  A   F++  +++P + +A  ++   A   Y+   Y++A
Sbjct: 151 TESPDMIYHQAYADYQAGHYDIAISEFDRLVKEYPDSHLASSAVFWEAQSHYNLKHYKRA 210

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
            +L +  I +Y +S      YY  G  Y ++           K  ++   R++E +    
Sbjct: 211 LALYDAVIHKYVDSPKKATSYYKKGQVYEKL--------GNKKAAVKSYKRVLELFPLEQ 262

Query: 174 YVKGARFY 181
            +      
Sbjct: 263 QLDDLSKR 270


>gi|29348225|ref|NP_811728.1| TPR domain-containing protein [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29340128|gb|AAO77922.1| TPR domain-containing protein [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 1003

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 81/280 (28%), Gaps = 60/280 (21%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K    I  ++  C  +    Q+S  +             +Y++     +E+N++ A  
Sbjct: 1   MKKRISRIICTLLCCAPIAISAQTSEKI--------TSPVNLYKEGKELFQEKNYAAAIP 52

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                 +  P A + + +  M     Y      +   L  +Y+  YP++   + +Y L+ 
Sbjct: 53  ALKAFVKQKPTASLLQDAEYMLVSSAYELKDKNR-IELLRKYLDCYPDTPYANRIYSLLA 111

Query: 139 MSYA-----------------QMIRDVPYDQR------------ATKLMLQYMSRIVERY 169
             Y                   ++ +   D R              K    +   +    
Sbjct: 112 SCYFYEGKYDEALALFNSTRLDLLGNEERDDRTYQLATCYMKTDNLKEAAIWFETLRASS 171

Query: 170 TNSPYVKGARFYVTVGRNQLAAKE--------------------VEIGRYYLKRGEYVAA 209
               Y K   +Y+   R      +                      I   Y  +  Y  A
Sbjct: 172 P--KYAKDCSYYLAYIRYTQKRYDEALKDFLPLQDDPKYKELVPYYIAEIYAIKKNYDKA 229

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
               Q  L+ Y + EHA E    L +AY       +A E 
Sbjct: 230 QIVAQNYLSAYPNNEHAAEMYRILGDAYYHFGQYHQAVEA 269



 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 72/207 (34%), Gaps = 28/207 (13%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           Y    +    +++++A  YF +     +      +A  +         +   +++A    
Sbjct: 513 YNLGYIAFHRKDYTQASNYFQKYIQLEKGENRTALA-DAYNRIGDCHLNVRNFEEAKHYY 571

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
            +       + + DY +Y + +                   +  ++R+V +Y +SPY   
Sbjct: 572 SQAEQMN--TPSGDYSFYQLALVSGLQKDYTGK--------ITLLNRLVGKYPSSPYAVN 621

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           A                E GR Y+       AI  F+ +L  Y ++  + +A A +   Y
Sbjct: 622 AI--------------YEKGRSYVLMDNNSQAITSFKELLEKYPESPVSRKAAAEIGLLY 667

Query: 238 VALALMDEAREVVSLIQERYPQGYWAR 264
                 D+A      + E+YP    AR
Sbjct: 668 YQNGNFDQAINAYKQVIEKYPGSEEAR 694



 Score = 56.7 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 81/236 (34%), Gaps = 45/236 (19%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
            +       +YEK   ++   N S+A   F +    +P + V+RK+      + Y  G +
Sbjct: 614 PSSPYAVNAIYEKGRSYVLMDNNSQAITSFKELLEKYPESPVSRKAAAEIGLLYYQNGNF 673

Query: 111 QQAASLGEEYITQYPESKNVDYVY------YL--------VGMSYAQ----MIRDVPYD- 151
            QA +  ++ I +YP S+            Y+          ++ A            D 
Sbjct: 674 DQAINAYKQVIEKYPGSEEARLAMRDMKSIYVDLNRIDEFAALANAMPGHIRFDASEQDS 733

Query: 152 -----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
                      +  T+     +++ ++ +    +   A +Y+    N+    ++ +    
Sbjct: 734 LTYAAAEKIYARGRTEEAKSSLNKYLQTFPEGAFSLNAHYYLCQIGNEQKNYDMVL---- 789

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           L  G+           L  Y +   AEEA+    E       M EA     +++E+
Sbjct: 790 LHSGK-----------LLEYPNNPFAEEALIMRAEVQFNQQQMAEALASYKMLKEK 834



 Score = 51.7 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 45/125 (36%), Gaps = 8/125 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A++   +++++      N+    +P +  A  ++              QA +  +E 
Sbjct: 587 YQLALVSGLQKDYTGKITLLNRLVGKYPSSPYAVNAIYEKGRSYVLMDNNSQAITSFKEL 646

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           + +YPES         +G+ Y Q               +    +++E+Y  S   + A  
Sbjct: 647 LEKYPESPVSRKAAAEIGLLYYQN--------GNFDQAINAYKQVIEKYPGSEEARLAMR 698

Query: 181 YVTVG 185
            +   
Sbjct: 699 DMKSI 703



 Score = 40.9 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 65/218 (29%), Gaps = 70/218 (32%)

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE----------------------YI--- 121
           +P    A ++L+M A VQ++  +  +A +  +                       ++   
Sbjct: 798 YPNNPFAEEALIMRAEVQFNQQQMAEALASYKMLKEKATNVERRQLAETGILRCAFLLRD 857

Query: 122 ---------------TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
                             PE KN     Y    +Y          Q+A K  L     + 
Sbjct: 858 DVETIHAATEVLAEAKLSPELKN--EALYYRAKAYKN--------QKADKKALDDFRELA 907

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
           +   NS Y   A+               ++ +      EY AA       +       HA
Sbjct: 908 KDTRNS-YGAEAK--------------YQVAQALYDAKEYAAAEKELLNYIE--QSTPHA 950

Query: 227 E---EAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
                +   L + YVA+    +AR+ +  +Q+ Y    
Sbjct: 951 YWLARSFVLLSDVYVAMGKDLDARQYLLSLQQNYQGND 988



 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 81/233 (34%), Gaps = 38/233 (16%)

Query: 50  SVTDVRYQREV--YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
            + D    +E+  Y  A ++  ++N+ KA          +P    A +   +     Y  
Sbjct: 201 PLQDDPKYKELVPYYIAEIYAIKKNYDKAQIVAQNYLSAYPNNEHAAEMYRILGDAYYHF 260

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           G+Y QA      Y+ +   +   D   Y++G+SY Q         +      + + ++  
Sbjct: 261 GQYHQAVEAFTGYLDRDHSAPRRD-ALYMLGLSYYQT--------KVYSKAAEMLGQVTT 311

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKE---------------VEI---GRYYLKR------ 203
              N    + A  ++ +   QLA K                ++I     Y          
Sbjct: 312 A--NDALTQNAYLHMGLSYLQLAEKNKARMAFEQAAASNANLQIKEQAAYNYALCLHETS 369

Query: 204 -GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
              +  ++  F+  L  +  + +AE+    LVE Y+     + A + +  I +
Sbjct: 370 YSAFGESVTAFEKFLNEFPTSPYAEKVSNYLVEVYINTRSYEAALKSIERIAK 422



 Score = 37.0 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 30/236 (12%), Positives = 73/236 (30%), Gaps = 40/236 (16%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAAS 115
           +++         NF +A +Y NQ           R++   + +      Y   +  +AA 
Sbjct: 435 LFQLGTQSFANANFEQALQYLNQSITI---GQYNRQTKADAYYWCGESYYRLNRMMEAAR 491

Query: 116 LGEEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV--ERYTN 171
               Y+     P ++       +  ++   +   + + ++       Y  + +  E+  N
Sbjct: 492 DFNAYLQLTTQPNNE-------MYALANYNL-GYIAFHRKDYTQASNYFQKYIQLEKGEN 543

Query: 172 SPYVKGARFYVTVGRNQL-----AAKEVEIGR----------YYLK------RGEYVAAI 210
              +  A   +      +     A                  +Y        + +Y   I
Sbjct: 544 RTALADAYNRIGDCHLNVRNFEEAKHYYSQAEQMNTPSGDYSFYQLALVSGLQKDYTGKI 603

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
                ++  Y  + +A  A+     +YV +    +A      + E+YP+   +R  
Sbjct: 604 TLLNRLVGKYPSSPYAVNAIYEKGRSYVLMDNNSQAITSFKELLEKYPESPVSRKA 659



 Score = 35.1 bits (80), Expect = 9.5,   Method: Composition-based stats.
 Identities = 22/172 (12%), Positives = 50/172 (29%), Gaps = 22/172 (12%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
           YLD       +  +Y   + + + + +SKA E   Q +       + + + L        
Sbjct: 273 YLDRDHSAPRRDALYMLGLSYYQTKVYSKAAEMLGQVTT--ANDALTQNAYLHMGLSYLQ 330

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
             +  +A    E+        +  +   Y   +   +          A    +    + +
Sbjct: 331 LAEKNKARMAFEQAAASNANLQIKEQAAYNYALCLHETSYS------AFGESVTAFEKFL 384

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
             +  SPY +    Y+                 Y+    Y AA+   + +  
Sbjct: 385 NEFPTSPYAEKVSNYLVEV--------------YINTRSYEAALKSIERIAK 422


>gi|317402472|gb|EFV83040.1| periplasmic protein [Achromobacter xylosoxidans C54]
          Length = 230

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 17/137 (12%), Positives = 48/137 (35%), Gaps = 8/137 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           +      ++  Y+ A+   ++  + +A E     +  +P + +A  +       +Y+   
Sbjct: 102 ATAGDPQEQAAYDGAIDLFRKGQYKEASESLAAFTALYPASQLAPSAQFYLGSSRYALKD 161

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           ++ A       + + P++        ++  S  +M                 + RIV  Y
Sbjct: 162 FKGAIEQLNAMVQKAPDNARAPDALLVIAGSQIEMNNRAG--------AKTTLQRIVRDY 213

Query: 170 TNSPYVKGARFYVTVGR 186
             +P    A+  + + +
Sbjct: 214 PTTPAANTAKSRLQLLQ 230



 Score = 38.9 bits (90), Expect = 0.83,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 40/116 (34%), Gaps = 14/116 (12%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           K   + ++     Y  S     A+FY+   R  L               ++  AI +   
Sbjct: 126 KEASESLAAFTALYPASQLAPSAQFYLGSSRYAL--------------KDFKGAIEQLNA 171

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           ++    D   A +A+  +  + + +     A+  +  I   YP    A   ++ ++
Sbjct: 172 MVQKAPDNARAPDALLVIAGSQIEMNNRAGAKTTLQRIVRDYPTTPAANTAKSRLQ 227


>gi|148270125|ref|YP_001244585.1| TPR repeat-containing protein [Thermotoga petrophila RKU-1]
 gi|147735669|gb|ABQ47009.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga petrophila
           RKU-1]
          Length = 357

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 85/239 (35%), Gaps = 41/239 (17%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           LD   +     E+  K  L +++    +  ++ ++     P      ++        Y+ 
Sbjct: 124 LDIDENYAPAYEL--KGSLLVEQGKIEEGIKFLDKAVEIDP---WLVQAYASLGEAYYNL 178

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           G Y++A    E  +   P  K     Y+++  +Y +M R          L ++ + R++E
Sbjct: 179 GDYEKAIHYWERELEYNPNDKIT---YFMITEAYYEMNRK--------DLAVKALERLLE 227

Query: 168 RYTNS-----------------PYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAA 209
              ++                    +     +   + +    E+E   R  LK G Y   
Sbjct: 228 IDPDNIPALYQLSQLYRELGNEEKAREMEEKIMNCKPK-YPTELEPWARVMLKHGRYKEV 286

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
               + ++ +   +     A   LV  YV L  +D+ARE++  I +     +W  Y + 
Sbjct: 287 AEELEKIVES---SPLNTLARLLLVVPYVKLGQIDKAREILDDIGQN---NFWYYYGKK 339


>gi|225024318|ref|ZP_03713510.1| hypothetical protein EIKCOROL_01193 [Eikenella corrodens ATCC
           23834]
 gi|224942903|gb|EEG24112.1| hypothetical protein EIKCOROL_01193 [Eikenella corrodens ATCC
           23834]
          Length = 221

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 45/129 (34%), Gaps = 10/129 (7%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
            Q + Y++A+   +   +S+A +      R    +   + +L +           +    
Sbjct: 99  PQEQAYQQALQLYRSGLYSQALQQLRFAERSGSGSRTEQNALFLLMQSHEKLRNCESVIL 158

Query: 116 LGEEYITQYPESKNVDYVYYLVGMS-YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
            G+ + T++  +       Y VG   +    RD+               ++++ Y NSP 
Sbjct: 159 TGQRFATRFAANPKAAEALYSVGSCQWGMQQRDIAR---------VTWRKLIQTYPNSPA 209

Query: 175 VKGARFYVT 183
            + A   + 
Sbjct: 210 ARRAGQRIQ 218


>gi|110598525|ref|ZP_01386794.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031]
 gi|110339829|gb|EAT58335.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031]
          Length = 261

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 57/142 (40%), Gaps = 8/142 (5%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
           +SS        T++  ++++ ++ V+   ++++S A E F +  + +P + +   +    
Sbjct: 127 KSSAVTDTLKTTEISPEKKLLDEGVVLFGKKSYSAARESFGKLIQGYPKSPLLSDAQFYL 186

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           A   +    +++A    +  I +Y +S       +   + + ++          T     
Sbjct: 187 AESYFLEKWFEKAILEYQVVIAKYTKSSKRPAALFKQAICFEKI--------GDTASAKA 238

Query: 161 YMSRIVERYTNSPYVKGARFYV 182
             S +V  Y  SP  K A+  +
Sbjct: 239 RYSSLVSVYPASPEAKLAKKKL 260



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 39/112 (34%), Gaps = 14/112 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              +   ++++ Y  SP +  A+                +   Y     +  AI  +Q+V
Sbjct: 161 AARESFGKLIQGYPKSPLLSDAQ--------------FYLAESYFLEKWFEKAILEYQVV 206

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           +A Y+ +     A+ +    +  +     A+   S +   YP    A+  + 
Sbjct: 207 IAKYTKSSKRPAALFKQAICFEKIGDTASAKARYSSLVSVYPASPEAKLAKK 258


>gi|253569409|ref|ZP_04846819.1| TPR domain-containing protein [Bacteroides sp. 1_1_6]
 gi|251841428|gb|EES69509.1| TPR domain-containing protein [Bacteroides sp. 1_1_6]
          Length = 1003

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 81/280 (28%), Gaps = 60/280 (21%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K    I  ++  C  +    Q+S  +             +Y++     +E+N++ A  
Sbjct: 1   MKKRISRIICTLLCCAPIAISAQTSEKI--------TSPVNLYKEGKELFQEKNYAAAIP 52

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                 +  P A + + +  M     Y      +   L  +Y+  YP++   + +Y L+ 
Sbjct: 53  ALKAFVKQKPTASLLQDAEYMLVSSAYELKDKNR-IELLRKYLDCYPDTPYANRIYSLLA 111

Query: 139 MSYA-----------------QMIRDVPYDQR------------ATKLMLQYMSRIVERY 169
             Y                   ++ +   D R              K    +   +    
Sbjct: 112 SCYFYEGKYDEALALFNSTRLDLLGNEERDDRTYQLATCYMKTDNLKEAAIWFETLRASS 171

Query: 170 TNSPYVKGARFYVTVGRNQLAAKE--------------------VEIGRYYLKRGEYVAA 209
               Y K   +Y+   R      +                      I   Y  +  Y  A
Sbjct: 172 P--KYAKDCSYYLAYIRYTQKRYDEALKDFLPLQDDPKYKELVPYYIAEIYAIKKNYDKA 229

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
               Q  L+ Y + EHA E    L +AY       +A E 
Sbjct: 230 QIVAQNYLSAYPNNEHAAEMYRILGDAYYHFGQYHQAVEA 269



 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 72/207 (34%), Gaps = 28/207 (13%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           Y    +    +++++A  YF +     +      +A  +         +   +++A    
Sbjct: 513 YNLGYIAFHRKDYTQASNYFQKYIQLEKGENRTALA-DAYNRIGDCHLNVRNFEEAKHYY 571

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
            +       + + DY +Y + +                   +  ++R+V +Y +SPY   
Sbjct: 572 SQAEQMN--TPSGDYSFYQLALVSGLQKDYTGK--------ITLLNRLVGKYPSSPYAVN 621

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           A                E GR Y+       AI  F+ +L  Y ++  + +A A +   Y
Sbjct: 622 AI--------------YEKGRSYVLMDNNGQAITSFKELLEKYPESPVSRKAAAEIGLLY 667

Query: 238 VALALMDEAREVVSLIQERYPQGYWAR 264
                 D+A      + E+YP    AR
Sbjct: 668 YQNGNFDQAINAYKQVIEKYPGSEEAR 694



 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 80/236 (33%), Gaps = 45/236 (19%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
            +       +YEK   ++   N  +A   F +    +P + V+RK+      + Y  G +
Sbjct: 614 PSSPYAVNAIYEKGRSYVLMDNNGQAITSFKELLEKYPESPVSRKAAAEIGLLYYQNGNF 673

Query: 111 QQAASLGEEYITQYPESKNVDYVY------YL--------VGMSYAQ----MIRDVPYD- 151
            QA +  ++ I +YP S+            Y+          ++ A            D 
Sbjct: 674 DQAINAYKQVIEKYPGSEEARLAMRDMKSIYVDLNRIDEFAALANAMPGHIRFDASEQDS 733

Query: 152 -----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
                      +  T+     +++ ++ +    +   A +Y+    N+    ++ +    
Sbjct: 734 LTYAAAEKIYARGRTEEAKSSLNKYLQTFPEGAFSLNAHYYLCQIGNEQKNYDMVL---- 789

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           L  G+           L  Y +   AEEA+    E       M EA     +++E+
Sbjct: 790 LHSGK-----------LLEYPNNPFAEEALIMRAEVQFNQQQMAEALASYKMLKEK 834



 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 45/125 (36%), Gaps = 8/125 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A++   +++++      N+    +P +  A  ++              QA +  +E 
Sbjct: 587 YQLALVSGLQKDYTGKITLLNRLVGKYPSSPYAVNAIYEKGRSYVLMDNNGQAITSFKEL 646

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           + +YPES         +G+ Y Q               +    +++E+Y  S   + A  
Sbjct: 647 LEKYPESPVSRKAAAEIGLLYYQN--------GNFDQAINAYKQVIEKYPGSEEARLAMR 698

Query: 181 YVTVG 185
            +   
Sbjct: 699 DMKSI 703



 Score = 40.5 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 65/218 (29%), Gaps = 70/218 (32%)

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE----------------------YI--- 121
           +P    A ++L+M A VQ++  +  +A +  +                       ++   
Sbjct: 798 YPNNPFAEEALIMRAEVQFNQQQMAEALASYKMLKEKATNVERRQLAETGILRCAFLLRD 857

Query: 122 ---------------TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
                             PE KN     Y    +Y          Q+A K  L     + 
Sbjct: 858 DVETIHAATEVLAEAKLSPELKN--EALYYRAKAYKN--------QKADKKALDDFRELA 907

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
           +   NS Y   A+               ++ +      EY AA       +       HA
Sbjct: 908 KDTRNS-YGAEAK--------------YQVAQALYDAKEYAAAEKELLNYIE--QSTPHA 950

Query: 227 E---EAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
                +   L + YVA+    +AR+ +  +Q+ Y    
Sbjct: 951 YWLARSFVLLSDVYVAMGKDLDARQYLLSLQQNYQGND 988



 Score = 38.9 bits (90), Expect = 0.83,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 81/233 (34%), Gaps = 38/233 (16%)

Query: 50  SVTDVRYQREV--YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
            + D    +E+  Y  A ++  ++N+ KA          +P    A +   +     Y  
Sbjct: 201 PLQDDPKYKELVPYYIAEIYAIKKNYDKAQIVAQNYLSAYPNNEHAAEMYRILGDAYYHF 260

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           G+Y QA      Y+ +   +   D   Y++G+SY Q         +      + + ++  
Sbjct: 261 GQYHQAVEAFTGYLDRDHSAPRRD-ALYMLGLSYYQT--------KVYSKAAEMLGQVTT 311

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKE---------------VEI---GRYYLKR------ 203
              N    + A  ++ +   QLA K                ++I     Y          
Sbjct: 312 A--NDALTQNAYLHMGLSYLQLAEKNKARMAFEQAAASNANLQIKEQAAYNYALCLHETS 369

Query: 204 -GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
              +  ++  F+  L  +  + +AE+    LVE Y+     + A + +  I +
Sbjct: 370 YSAFGESVTAFEKFLNEFPTSPYAEKVSNYLVEVYMNTRSYEAALKSIERIAK 422



 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 30/236 (12%), Positives = 73/236 (30%), Gaps = 40/236 (16%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAAS 115
           +++         NF +A +Y NQ           R++   + +      Y   +  +AA 
Sbjct: 435 LFQLGTQSFANANFEQALQYLNQSIAI---GQYNRQTKADAYYWCGESYYRLNRMMEAAR 491

Query: 116 LGEEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV--ERYTN 171
               Y+     P ++       +  ++   +   + + ++       Y  + +  E+  N
Sbjct: 492 DFNAYLQLTTQPNNE-------MYALANYNL-GYIAFHRKDYTQASNYFQKYIQLEKGEN 543

Query: 172 SPYVKGARFYVTVGRNQL-----AAKEVEIGR----------YYLK------RGEYVAAI 210
              +  A   +      +     A                  +Y        + +Y   I
Sbjct: 544 RTALADAYNRIGDCHLNVRNFEEAKHYYSQAEQMNTPSGDYSFYQLALVSGLQKDYTGKI 603

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
                ++  Y  + +A  A+     +YV +    +A      + E+YP+   +R  
Sbjct: 604 TLLNRLVGKYPSSPYAVNAIYEKGRSYVLMDNNGQAITSFKELLEKYPESPVSRKA 659



 Score = 36.2 bits (83), Expect = 5.4,   Method: Composition-based stats.
 Identities = 22/172 (12%), Positives = 50/172 (29%), Gaps = 22/172 (12%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
           YLD       +  +Y   + + + + +SKA E   Q +       + + + L        
Sbjct: 273 YLDRDHSAPRRDALYMLGLSYYQTKVYSKAAEMLGQVTT--ANDALTQNAYLHMGLSYLQ 330

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
             +  +A    E+        +  +   Y   +   +          A    +    + +
Sbjct: 331 LAEKNKARMAFEQAAASNANLQIKEQAAYNYALCLHETSYS------AFGESVTAFEKFL 384

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
             +  SPY +    Y+                 Y+    Y AA+   + +  
Sbjct: 385 NEFPTSPYAEKVSNYLVEV--------------YMNTRSYEAALKSIERIAK 422


>gi|330877971|gb|EGH12120.1| tol-pal system protein YbgF [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 253

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 8/136 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D   ++  YE A   +K ++F KA + F    R +P +  A  +      V  + G 
Sbjct: 126 EPPDPTKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 185

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            Q A     +   QYP+   V    Y +         DV      T  +   + ++V +Y
Sbjct: 186 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 237

Query: 170 TNSPYVKGARFYVTVG 185
             +   + A+  +   
Sbjct: 238 PGTSAAQLAQRDLQRL 253



 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
             +I+   +D        Q  +  + +Y NS Y   A++++      LA  +++      
Sbjct: 141 FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 187

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
                  A   F  V   Y       +++ +L +    L   D+ + ++  +  +YP   
Sbjct: 188 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 241

Query: 262 WARYVETLVK 271
            A+  +  ++
Sbjct: 242 AAQLAQRDLQ 251


>gi|270159823|ref|ZP_06188479.1| tetratricopeptide repeat protein [Legionella longbeachae D-4968]
 gi|289165419|ref|YP_003455557.1| hypothetical protein LLO_2086 [Legionella longbeachae NSW150]
 gi|269988162|gb|EEZ94417.1| tetratricopeptide repeat protein [Legionella longbeachae D-4968]
 gi|288858592|emb|CBJ12473.1| putative conserved hypothetical protein [Legionella longbeachae
           NSW150]
          Length = 318

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 59/150 (39%), Gaps = 25/150 (16%)

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              P  + + Y      ++  ++I++  YD       +  M+  V++Y    Y   A+++
Sbjct: 192 RANPADEQISY------LAAYELIKNKRYD-----DAITAMNVFVQKYPKGGYTANAQYW 240

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
           +              G  YL + +Y  +I  F  VL  +  +  +  +M ++  AY    
Sbjct: 241 L--------------GELYLVKKDYSKSIEHFNTVLQQFPTSSKSAASMLKVGYAYAEQG 286

Query: 242 LMDEAREVVSLIQERYPQGYWARYVETLVK 271
              EA++ +  +   YP    A+   + ++
Sbjct: 287 NKQEAKKFLQQVVRAYPNTPTAQLASSKLR 316



 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 43/125 (34%), Gaps = 8/125 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A   +K + +  A    N   + +P  G    +      +      Y ++       
Sbjct: 202 YLAAYELIKNKRYDDAITAMNVFVQKYPKGGYTANAQYWLGELYLVKKDYSKSIEHFNTV 261

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           + Q+P S         VG +YA+        Q   +   +++ ++V  Y N+P  + A  
Sbjct: 262 LQQFPTSSKSAASMLKVGYAYAE--------QGNKQEAKKFLQQVVRAYPNTPTAQLASS 313

Query: 181 YVTVG 185
            +   
Sbjct: 314 KLRTI 318



 Score = 45.9 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/136 (13%), Positives = 45/136 (33%), Gaps = 22/136 (16%)

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
            +   ++A+      +Y  A +    ++ +YP+        Y +G  Y           +
Sbjct: 198 EQISYLAAYELIKNKRYDDAITAMNVFVQKYPKGGYTANAQYWLGELYLVK--------K 249

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
                +++ + +++++  S     +   V                 Y ++G    A    
Sbjct: 250 DYSKSIEHFNTVLQQFPTSSKSAASMLKVGYA--------------YAEQGNKQEAKKFL 295

Query: 214 QLVLANYSDAEHAEEA 229
           Q V+  Y +   A+ A
Sbjct: 296 QQVVRAYPNTPTAQLA 311


>gi|54297970|ref|YP_124339.1| hypothetical protein lpp2025 [Legionella pneumophila str. Paris]
 gi|53751755|emb|CAH13177.1| hypothetical protein lpp2025 [Legionella pneumophila str. Paris]
          Length = 322

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 53/140 (37%), Gaps = 25/140 (17%)

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              P  + + Y      ++  +++++  YD       ++ M   V++Y    Y   A   
Sbjct: 193 RANPADEQISY------LAAYELVKNKRYD-----EAIKSMQIFVQKYPRGGYTANA--- 238

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
                      E  +G  YL + +Y  AI  F++VL  Y  +  A  ++ +   AY    
Sbjct: 239 -----------EYWLGELYLVKKDYSKAIEHFEIVLQQYPSSSKAAASLLKSGYAYAEKG 287

Query: 242 LMDEAREVVSLIQERYPQGY 261
              EA++    + + YP   
Sbjct: 288 DKQEAKKRFQQVVKTYPDTP 307



 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 49/151 (32%), Gaps = 8/151 (5%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
            G      + V   S  +   ++  Y  A   +K + + +A +      + +P  G    
Sbjct: 178 TGSSNSKPQPVVAVSRANPADEQISYLAAYELVKNKRYDEAIKSMQIFVQKYPRGGYTAN 237

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +      +      Y +A    E  + QYP S          G +YA+            
Sbjct: 238 AEYWLGELYLVKKDYSKAIEHFEIVLQQYPSSSKAAASLLKSGYAYAEK--------GDK 289

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
           +   +   ++V+ Y ++P  + A   +    
Sbjct: 290 QEAKKRFQQVVKTYPDTPTAQLASSKLEAIN 320



 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 47/136 (34%), Gaps = 22/136 (16%)

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
            +   ++A+      +Y +A    + ++ +YP         Y +G  Y           +
Sbjct: 199 EQISYLAAYELVKNKRYDEAIKSMQIFVQKYPRGGYTANAEYWLGELYLVK--------K 250

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
                +++   ++++Y +S     +                     Y ++G+   A  RF
Sbjct: 251 DYSKAIEHFEIVLQQYPSSSKAAASLLKSGYA--------------YAEKGDKQEAKKRF 296

Query: 214 QLVLANYSDAEHAEEA 229
           Q V+  Y D   A+ A
Sbjct: 297 QQVVKTYPDTPTAQLA 312


>gi|78776614|ref|YP_392929.1| DNA uptake lipoprotein-like [Sulfurimonas denitrificans DSM 1251]
 gi|78497154|gb|ABB43694.1| DNA uptake lipoprotein-like protein [Sulfurimonas denitrificans DSM
           1251]
          Length = 286

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 56/152 (36%), Gaps = 4/152 (2%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y K V  +   +   A  Y++    +   + +  ++ +M +       +Y  +    +EY
Sbjct: 36  YTKIVEHVSNGDLESADNYYSSLQGEHIGSPLLPEATMMLSIAHMQEEEYLLSEHFLDEY 95

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           I +Y      +   +L   +  + + +   DQ   +  +       + Y +S Y +    
Sbjct: 96  IKRYATPNEKENAEFLKIKAKYKALPNPRRDQVLIEEAIAQGELFKQAYPDSMYYEVVNT 155

Query: 181 YVTVGRNQLAAKEV--EIGRYYLKRGEYVAAI 210
            +T     LA   +  EI   Y +  +  +A+
Sbjct: 156 MLTRLY--LAQFVLNEEISDLYDRLDKPKSAL 185


>gi|260429456|ref|ZP_05783433.1| tetratricopeptide TPR_2 repeat protein [Citreicella sp. SE45]
 gi|260420079|gb|EEX13332.1| tetratricopeptide TPR_2 repeat protein [Citreicella sp. SE45]
          Length = 281

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 43/125 (34%), Gaps = 14/125 (11%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           + +A   L   +F  A + F    + FP + +   +LL         G  ++A      +
Sbjct: 162 FRRAQEALASGDFQSAADQFASFRQTFPGSPLEPAALLGEGKALADVGNTREA---ARRF 218

Query: 121 ITQ---YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           +     YPES       + +G S   +         +       +S +  RY  S  V  
Sbjct: 219 LDTYANYPESDAAPEALWRLGASLGAL--------GSVSEACVTLSEVSARYPGSASVTD 270

Query: 178 ARFYV 182
           A+  +
Sbjct: 271 AQAEM 275



 Score = 49.3 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 46/119 (38%), Gaps = 19/119 (15%)

Query: 147 DVPYDQRA-----TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
           D    Q A      +      +   + +  SP    A   +  G+  LA    ++G    
Sbjct: 161 DFRRAQEALASGDFQSAADQFASFRQTFPGSPLEPAAL--LGEGK-ALA----DVGN--- 210

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            R     A  RF    ANY +++ A EA+ RL  +  AL  + EA   +S +  RYP  
Sbjct: 211 TRE----AARRFLDTYANYPESDAAPEALWRLGASLGALGSVSEACVTLSEVSARYPGS 265


>gi|301062461|ref|ZP_07203112.1| tol-pal system protein YbgF [delta proteobacterium NaphS2]
 gi|300443435|gb|EFK07549.1| tol-pal system protein YbgF [delta proteobacterium NaphS2]
          Length = 285

 Score = 58.6 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/141 (12%), Positives = 54/141 (38%), Gaps = 8/141 (5%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
              +    +   +++YE  +   +++ +  +   F    +++P + +A  +         
Sbjct: 153 AQPEPEIKIPADQKLYEVNMDLYRKEKYDDSIVGFKTFLKEYPKSKLADNAAFWIGESHM 212

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
           +  +Y+QA    ++ I QYP+   V        +++ ++                 + ++
Sbjct: 213 ALKQYEQAILAFQKVIKQYPKGNKVPNALLRQALAFDELNDKTS--------AKLLLKKL 264

Query: 166 VERYTNSPYVKGARFYVTVGR 186
           +++Y  S   K A+  +   +
Sbjct: 265 IKQYPKSNEAKIAKNKLKKMK 285



 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 39/110 (35%), Gaps = 14/110 (12%)

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
               ++ Y  S     A F++      L               +Y  AI  FQ V+  Y 
Sbjct: 187 FKTFLKEYPKSKLADNAAFWIGESHMAL--------------KQYEQAILAFQKVIKQYP 232

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
                  A+ R   A+  L     A+ ++  + ++YP+   A+  +  +K
Sbjct: 233 KGNKVPNALLRQALAFDELNDKTSAKLLLKKLIKQYPKSNEAKIAKNKLK 282



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 35/85 (41%), Gaps = 8/85 (9%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y   KY  +    + ++ +YP+SK  D   + +G S+  +        +  +  +    +
Sbjct: 175 YRKEKYDDSIVGFKTFLKEYPKSKLADNAAFWIGESHMAL--------KQYEQAILAFQK 226

Query: 165 IVERYTNSPYVKGARFYVTVGRNQL 189
           ++++Y     V  A     +  ++L
Sbjct: 227 VIKQYPKGNKVPNALLRQALAFDEL 251



 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 32/61 (52%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            ++ +Y  +I  F+  L  Y  ++ A+ A   + E+++AL   ++A      + ++YP+G
Sbjct: 175 YRKEKYDDSIVGFKTFLKEYPKSKLADNAAFWIGESHMALKQYEQAILAFQKVIKQYPKG 234

Query: 261 Y 261
            
Sbjct: 235 N 235


>gi|170723152|ref|YP_001750840.1| tol-pal system protein YbgF [Pseudomonas putida W619]
 gi|169761155|gb|ACA74471.1| tol-pal system protein YbgF [Pseudomonas putida W619]
          Length = 271

 Score = 58.6 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 51/136 (37%), Gaps = 8/136 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D   ++  Y+ A   +K+++F KA + F    R +P +  A  +      V  + G 
Sbjct: 144 EPGDPAKEKLYYDAAFDLIKQKDFDKASQAFGAFLRKYPNSQYAGNAQYWLGEVNLAKGD 203

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            Q A+    +   +YP+   V    Y +         DV      T  +   + +++ +Y
Sbjct: 204 LQSASQAFAQVSQKYPKHSKVPDSLYKLA--------DVERRMGHTDKVKGILQQVITQY 255

Query: 170 TNSPYVKGARFYVTVG 185
             +   + A+  +   
Sbjct: 256 PGTSAAQLAQRDLQKL 271



 Score = 53.6 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 45/120 (37%), Gaps = 14/120 (11%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           Q+      Q     + +Y NS Y   A++++      LA  +++            +A  
Sbjct: 164 QKDFDKASQAFGAFLRKYPNSQYAGNAQYWLGEVN--LAKGDLQ------------SASQ 209

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
            F  V   Y       +++ +L +    +   D+ + ++  +  +YP    A+  +  ++
Sbjct: 210 AFAQVSQKYPKHSKVPDSLYKLADVERRMGHTDKVKGILQQVITQYPGTSAAQLAQRDLQ 269


>gi|238026335|ref|YP_002910566.1| hypothetical protein bglu_1g06690 [Burkholderia glumae BGR1]
 gi|237875529|gb|ACR27862.1| Hypothetical protein bglu_1g06690 [Burkholderia glumae BGR1]
          Length = 249

 Score = 58.6 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 14/120 (11%), Positives = 38/120 (31%), Gaps = 8/120 (6%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
             T    + + +  A    +  +F  A   F      +P +     +       QY+   
Sbjct: 121 EGTVQPGETDAFNAASQQFRSGDFKGAAASFRAFIAKYPQSPYQPVAQYWLGNAQYALRD 180

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y+ + +  +  +  YP+          +G         +   Q+A     +   +++ ++
Sbjct: 181 YKGSTATWQALVKAYPQHPRAGDALVAIG------TNQLEQGQKAA--AKRTFEQVLSQF 232



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 22/119 (18%)

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           Q+ +G ++ AA+    +I +YP+S       Y +G +   +      D + +    Q   
Sbjct: 138 QFRSGDFKGAAASFRAFIAKYPQSPYQPVAQYWLGNAQYAL-----RDYKGSTATWQA-- 190

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
            +V+ Y   P    A               V IG   L++G+  AA   F+ VL+ +  
Sbjct: 191 -LVKAYPQHPRAGDAL--------------VAIGTNQLEQGQKAAAKRTFEQVLSQFQG 234



 Score = 35.5 bits (81), Expect = 7.2,   Method: Composition-based stats.
 Identities = 13/107 (12%), Positives = 33/107 (30%), Gaps = 14/107 (13%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         + +Y  SPY   A++++       A   +          +Y  +   
Sbjct: 142 GDFKGAAASFRAFIAKYPQSPYQPVAQYWLGN-----AQYAL---------RDYKGSTAT 187

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           +Q ++  Y     A +A+  +    +       A+     +  ++  
Sbjct: 188 WQALVKAYPQHPRAGDALVAIGTNQLEQGQKAAAKRTFEQVLSQFQG 234



 Score = 35.5 bits (81), Expect = 8.1,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 23/59 (38%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            + G++  A   F+  +A Y  + +   A   L  A  AL     +      + + YPQ
Sbjct: 139 FRSGDFKGAAASFRAFIAKYPQSPYQPVAQYWLGNAQYALRDYKGSTATWQALVKAYPQ 197


>gi|325274585|ref|ZP_08140641.1| tol-pal system protein YbgF [Pseudomonas sp. TJI-51]
 gi|324100227|gb|EGB98017.1| tol-pal system protein YbgF [Pseudomonas sp. TJI-51]
          Length = 268

 Score = 58.6 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 51/136 (37%), Gaps = 8/136 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D   ++  Y+ A   +K+++F KA + F    R +P +  A  +      V  + G 
Sbjct: 141 EPGDPAKEKLYYDAAFDLIKQKDFDKASQAFTAFLRKYPNSQYAGNAQYWLGEVNLAKGD 200

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            Q A+    +   +YP+   V    Y +         DV      T  +   + +++ +Y
Sbjct: 201 LQGASQAFAQVSQKYPKHSKVPDSLYKLA--------DVERRMGHTDKVKSILQQVITQY 252

Query: 170 TNSPYVKGARFYVTVG 185
             +   + A+  +   
Sbjct: 253 PGTSAAQLAQRDLQKL 268



 Score = 54.4 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 45/120 (37%), Gaps = 14/120 (11%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           Q+      Q  +  + +Y NS Y   A++++      LA  +++             A  
Sbjct: 161 QKDFDKASQAFTAFLRKYPNSQYAGNAQYWLGEVN--LAKGDLQ------------GASQ 206

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
            F  V   Y       +++ +L +    +   D+ + ++  +  +YP    A+  +  ++
Sbjct: 207 AFAQVSQKYPKHSKVPDSLYKLADVERRMGHTDKVKSILQQVITQYPGTSAAQLAQRDLQ 266


>gi|237800228|ref|ZP_04588689.1| tol-pal system protein YbgF [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|237806416|ref|ZP_04593120.1| tol-pal system protein YbgF [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331023085|gb|EGI03142.1| tol-pal system protein YbgF [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331027529|gb|EGI07584.1| tol-pal system protein YbgF [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 252

 Score = 58.6 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 8/136 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D   ++  YE A   +K ++F KA + F    R +P +  A  +      V  + G 
Sbjct: 125 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 184

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            Q A     +   QYP+   V    Y +         DV      T  +   + ++V +Y
Sbjct: 185 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 236

Query: 170 TNSPYVKGARFYVTVG 185
             +   + A+  +   
Sbjct: 237 PGTSAAQLAQRDLQRL 252



 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
             +I+   +D        Q  +  + +Y NS Y   A++++      LA  +++      
Sbjct: 140 FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 186

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
                  A   F  V   Y       +++ +L +    L   D+ + ++  +  +YP   
Sbjct: 187 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 240

Query: 262 WARYVETLVK 271
            A+  +  ++
Sbjct: 241 AAQLAQRDLQ 250


>gi|148359616|ref|YP_001250823.1| outer membrane protein [Legionella pneumophila str. Corby]
 gi|296107658|ref|YP_003619359.1| outer membrane protein [Legionella pneumophila 2300/99 Alcoy]
 gi|148281389|gb|ABQ55477.1| outer membrane protein [Legionella pneumophila str. Corby]
 gi|295649560|gb|ADG25407.1| outer membrane protein [Legionella pneumophila 2300/99 Alcoy]
          Length = 322

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 53/140 (37%), Gaps = 25/140 (17%)

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              P  + + Y      ++  +++++  YD       ++ M   V++Y    Y   A   
Sbjct: 193 RANPADEQISY------LAAYELVKNKRYD-----EAIKSMQIFVQKYPRGGYTANA--- 238

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
                      E  +G  YL + +Y  AI  F++VL  Y  +  A  ++ +   AY    
Sbjct: 239 -----------EYWLGELYLVKKDYSKAIEHFEIVLQQYPSSSKAAASLLKSGYAYAEKG 287

Query: 242 LMDEAREVVSLIQERYPQGY 261
              EA++    + + YP   
Sbjct: 288 DKQEAKKRFQQVVKTYPDTP 307



 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 49/151 (32%), Gaps = 8/151 (5%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
            G      + V   S  +   ++  Y  A   +K + + +A +      + +P  G    
Sbjct: 178 AGSSNSKPQPVVAVSRANPADEQISYLAAYELVKNKRYDEAIKSMQIFVQKYPRGGYTAN 237

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +      +      Y +A    E  + QYP S          G +YA+            
Sbjct: 238 AEYWLGELYLVKKDYSKAIEHFEIVLQQYPSSSKAAASLLKSGYAYAEK--------GDK 289

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
           +   +   ++V+ Y ++P  + A   +    
Sbjct: 290 QEAKKRFQQVVKTYPDTPTAQLASSKLEAIN 320



 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 47/136 (34%), Gaps = 22/136 (16%)

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
            +   ++A+      +Y +A    + ++ +YP         Y +G  Y           +
Sbjct: 199 EQISYLAAYELVKNKRYDEAIKSMQIFVQKYPRGGYTANAEYWLGELYLVK--------K 250

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
                +++   ++++Y +S     +                     Y ++G+   A  RF
Sbjct: 251 DYSKAIEHFEIVLQQYPSSSKAAASLLKSGYA--------------YAEKGDKQEAKKRF 296

Query: 214 QLVLANYSDAEHAEEA 229
           Q V+  Y D   A+ A
Sbjct: 297 QQVVKTYPDTPTAQLA 312


>gi|254516701|ref|ZP_05128760.1| tetratricopeptide TPR_2 repeat protein [gamma proteobacterium
           NOR5-3]
 gi|219675124|gb|EED31491.1| tetratricopeptide TPR_2 repeat protein [gamma proteobacterium
           NOR5-3]
          Length = 304

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 42/126 (33%), Gaps = 12/126 (9%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
            V +   + E Y  A   ++ Q F +A   F      FP    A  +        Y    
Sbjct: 174 EVAEQPGEGEAYRAAYALVRGQEFDQAVSAFTAFLERFPAGRYAPNAHYWLGE-LYLVTD 232

Query: 110 YQQAASLGEEYITQ---YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
                +  + ++     YP +  +    Y +G  +         D+       ++++R++
Sbjct: 233 PADPEASRQAFMLLLNQYPTNAKIPDALYKLGRVHFMKGN---RDRSR-----EFLNRVI 284

Query: 167 ERYTNS 172
             Y +S
Sbjct: 285 REYPDS 290



 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 46/131 (35%), Gaps = 21/131 (16%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
             ++R   +DQ      +   +  +ER+    Y   A +++              G  YL
Sbjct: 189 YALVRGQEFDQ-----AVSAFTAFLERFPAGRYAPNAHYWL--------------GELYL 229

Query: 202 KRG--EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
                +  A+   F L+L  Y       +A+ +L   +      D +RE ++ +   YP 
Sbjct: 230 VTDPADPEASRQAFMLLLNQYPTNAKIPDALYKLGRVHFMKGNRDRSREFLNRVIREYPD 289

Query: 260 GYWARYVETLV 270
              AR     +
Sbjct: 290 SSAARLAGDFL 300


>gi|311280378|ref|YP_003942609.1| tol-pal system protein YbgF [Enterobacter cloacae SCF1]
 gi|308749573|gb|ADO49325.1| tol-pal system protein YbgF [Enterobacter cloacae SCF1]
          Length = 263

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 41/123 (33%), Gaps = 9/123 (7%)

Query: 61  YEKAVLFL-KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A+  +        A   F    + +P +     +      + Y+ GK   AA     
Sbjct: 146 YNAAIALVKDASRQDDAIAAFQSFIKKYPDSTYQPNANYWLGQLNYNKGKKDDAAFYFAS 205

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       Y VG+        +  D+  T        ++V +Y  +   K A+
Sbjct: 206 VVKNYPKSPKAADAMYKVGV--------IMQDKGDTAKAKAVYQQVVSKYPGTEGAKQAQ 257

Query: 180 FYV 182
             +
Sbjct: 258 KRL 260



 Score = 50.1 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 43/131 (32%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D       +      +++Y +S Y   A +++               
Sbjct: 142 ANTDYNAAIALVKDASRQDDAIAAFQSFIKKYPDSTYQPNANYWLGQLN----------- 190

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
             Y K  +  AA   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 191 --YNKGKKDDAAFY-FASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVVSKY 247

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 248 PGTEGAKQAQK 258



 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 43/123 (34%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A +  + +I +YP+S       Y +G       +              Y + +V+ Y 
Sbjct: 160 DDAIAAFQSFIKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAFYFASVVKNYP 211

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A + V V                  +G+   A   +Q V++ Y   E A++A 
Sbjct: 212 KSPKAADAMYKVGVIMQ--------------DKGDTAKAKAVYQQVVSKYPGTEGAKQAQ 257

Query: 231 ARL 233
            RL
Sbjct: 258 KRL 260


>gi|307579951|gb|ADN63920.1| tol-pal system protein YbgF [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 259

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 49/154 (31%), Gaps = 10/154 (6%)

Query: 39  ERQSSRDVYLDSVTDVRYQRE--VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
             + S +V+ D+        E   Y  A   LK   ++ A E F    + +P       +
Sbjct: 112 MSEQSPNVHGDASALTISNEERIAYNVAFDALKNSKYADAAELFMSFLQLYPNGVYTPNA 171

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
           L       Y+   +  A +     +++YP             +  A   ++         
Sbjct: 172 LYWLGESYYAMHDFVSAEAQFRTLLSRYPTHDKASGSLLKEALCQANQGKN--------D 223

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
                + +++ +Y  +   + A+  +   +   A
Sbjct: 224 AAQHSLEQVLSQYPGTDAARLAQERLQSMKLSQA 257



 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 42/115 (36%), Gaps = 14/115 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              +     ++ Y N  Y   A +++              G  Y    ++V+A  +F+ +
Sbjct: 150 DAAELFMSFLQLYPNGVYTPNALYWL--------------GESYYAMHDFVSAEAQFRTL 195

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           L+ Y   + A  ++ +           D A+  +  +  +YP    AR  +  ++
Sbjct: 196 LSRYPTHDKASGSLLKEALCQANQGKNDAAQHSLEQVLSQYPGTDAARLAQERLQ 250



 Score = 39.7 bits (92), Expect = 0.44,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 23/58 (39%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           LK  +Y  A   F   L  Y +  +   A+  L E+Y A+     A      +  RYP
Sbjct: 143 LKNSKYADAAELFMSFLQLYPNGVYTPNALYWLGESYYAMHDFVSAEAQFRTLLSRYP 200


>gi|326316640|ref|YP_004234312.1| tol-pal system protein YbgF [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323373476|gb|ADX45745.1| tol-pal system protein YbgF [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 268

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 46/132 (34%), Gaps = 8/132 (6%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
             ++  +E A+   +   F  A   F    R +P +G    +       QY+   Y++A 
Sbjct: 145 PAEKRDFEAALAVFRSGKFPDAVSAFGNFLRQYPRSGYMPSARFWLGNAQYATRDYKEAI 204

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
           +  +  +   P+            +S    I +   + + T+   + +  ++  Y  S  
Sbjct: 205 NNFKALLAASPDHARAPEA----ALS----IANCQIELKDTRAARKTLEDLLRAYPQSEA 256

Query: 175 VKGARFYVTVGR 186
              A+  +   +
Sbjct: 257 AAAAKERLARLK 268



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 46/143 (32%), Gaps = 22/143 (15%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           A K    +A   + +GK+  A S    ++ QYP S  +    + +G +            
Sbjct: 146 AEKRDFEAALAVFRSGKFPDAVSAFGNFLRQYPRSGYMPSARFWLGNAQYAT-------- 197

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           R  K  +     ++    +      A   +   + +L               +  AA   
Sbjct: 198 RDYKEAINNFKALLAASPDHARAPEAALSIANCQIEL--------------KDTRAARKT 243

Query: 213 FQLVLANYSDAEHAEEAMARLVE 235
            + +L  Y  +E A  A  RL  
Sbjct: 244 LEDLLRAYPQSEAAAAAKERLAR 266



 Score = 43.2 bits (101), Expect = 0.041,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 37/105 (35%), Gaps = 14/105 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             +      + +Y  S Y+  ARF++   +                  +Y  AI  F+ +
Sbjct: 165 DAVSAFGNFLRQYPRSGYMPSARFWLGNAQ--------------YATRDYKEAINNFKAL 210

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           LA   D   A EA   +    + L     AR+ +  +   YPQ  
Sbjct: 211 LAASPDHARAPEAALSIANCQIELKDTRAARKTLEDLLRAYPQSE 255


>gi|289803195|ref|ZP_06533824.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 176

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 46/126 (36%), Gaps = 9/126 (7%)

Query: 61  YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A+  +++++    A   F    + +P +     +      + Y+ GK   AA     
Sbjct: 59  YNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFAS 118

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       Y VG+        +  D+  T        +++++Y  +   K A+
Sbjct: 119 VVKNYPKSPKAADAMYKVGV--------IMQDKGDTDKSESGYQQVIKKYPGTDGAKQAQ 170

Query: 180 FYVTVG 185
             +   
Sbjct: 171 KRLNAM 176



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 43/131 (32%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      +++Y +S Y   A +++               
Sbjct: 55  ANTDYNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLN----------- 103

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
                +G+   A   F  V+ NY  +  A +AM ++          D++      + ++Y
Sbjct: 104 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTDKSESGYQQVIKKY 160

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 161 PGTDGAKQAQK 171


>gi|332884569|gb|EGK04827.1| hypothetical protein HMPREF9456_03297 [Dysgonomonas mossii DSM
           22836]
          Length = 998

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 86/249 (34%), Gaps = 49/249 (19%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE- 119
           Y  A   L++ +  +A   F   SR+      A  +    A+  +  G+Y QA +     
Sbjct: 142 YRMAYASLQKGDRKEAKNLFGLLSRN--SKKYAEPASYYLAYANFKEGEYDQAIATFRRL 199

Query: 120 ---------------------------------YITQYPESKNVDYVYYLVGMSYAQM-- 144
                                            +I+ YP SKN+  VY L+G SY ++  
Sbjct: 200 KSKPEYKENATFFLIQSEFLQGNMNGTISEGQDFISSYPGSKNIAEVYRLLGSSYYRLGN 259

Query: 145 ----IRDVPYDQRATKLML-QYMSRIVERYTNS-PY--VKGARFYVTVGRNQLAA-KEVE 195
               IR+    +  T     + M ++ E Y  +  Y     A   V    ++L    ++ 
Sbjct: 260 IQSTIRNYEQYRATTSTPFREDMYQLAEAYYQTGAYGNAVEALKDVASTTDKLGQAGQML 319

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA--RLVEAYVALALMDEAREVVSLI 253
           +G+ YLK  +   A+  F+    +  D   +E A+    ++          EA       
Sbjct: 320 LGQSYLKLNDTQNAVMAFEAAARSEFDPSISEGALYNNVMIRNRDGGGAFGEAITASQRF 379

Query: 254 QERYPQGYW 262
             +YP   +
Sbjct: 380 LAQYPNSKY 388



 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 68/192 (35%), Gaps = 24/192 (12%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
             + L  +NFS+A  Y+ Q     P    A  S    AFV      Y    +     + +
Sbjct: 550 GDINLYNRNFSEAERYYAQAVSSNP--ENADYSEFQKAFVLGLQRNYSGKVTALNSMMAK 607

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
           YP S+ +D   Y    +     ++        +  +  + ++++ +  S   + A   + 
Sbjct: 608 YPNSQYIDDALYEKSRALVMQNKE--------QEAISVLEKMLKDHPKSNLAQKAGVQL- 658

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
                        G+ Y        +   ++ V+ANY ++E A  A+  L   Y  +  +
Sbjct: 659 -------------GQLYFNTNNPRKSAEAYKQVIANYPNSEEARTAIESLEAVYKDMNDI 705

Query: 244 DEAREVVSLIQE 255
                 V+ + +
Sbjct: 706 SSYASYVNSLGK 717



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/245 (13%), Positives = 74/245 (30%), Gaps = 58/245 (23%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQC-------SRDFPFAGVARKSLLMSAFVQYSAGK 109
               + +  +  +  ++  A   +           +++P       +L   A+ Q+    
Sbjct: 466 NEAYFWRGDIAYRSADYGTAARDYTAYIGQASPSQKNYP------LALYNLAYAQFQDKV 519

Query: 110 YQQAASLGEEYITQ--YPESKNVDYVYYLVG--MSYAQMIRDVPY-------------DQ 152
           Y  A +  ++YI+     +S N       +G    Y +   +                D 
Sbjct: 520 YSSALNNFKKYISAESNKQSPNYSDALNRIGDINLYNRNFSEAERYYAQAVSSNPENADY 579

Query: 153 RATKLML------------QYMSRIVERYTNSPYVKGA-RFYVTVGRNQLAAKEVEIGRY 199
              +                 ++ ++ +Y NS Y+  A          Q   +E      
Sbjct: 580 SEFQKAFVLGLQRNYSGKVTALNSMMAKYPNSQYIDDALYEKSRALVMQNKEQE------ 633

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
                    AI   + +L ++  +  A++A  +L + Y       ++ E    +   YP 
Sbjct: 634 ---------AISVLEKMLKDHPKSNLAQKAGVQLGQLYFNTNNPRKSAEAYKQVIANYPN 684

Query: 260 GYWAR 264
              AR
Sbjct: 685 SEEAR 689



 Score = 35.9 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 40/132 (30%), Gaps = 20/132 (15%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           + T   ++ ++Y+ A  + +   +  A E     +       + +   ++          
Sbjct: 272 ATTSTPFREDMYQLAEAYYQTGAYGNAVEALKDVAST--TDKLGQAGQMLLGQSYLKLND 329

Query: 110 YQQAASLGE-----EYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
            Q A    E     E+        ++     Y        MIR+      A    +    
Sbjct: 330 TQNAVMAFEAAARSEF------DPSISEGALY-----NNVMIRNRDGG-GAFGEAITASQ 377

Query: 164 RIVERYTNSPYV 175
           R + +Y NS Y 
Sbjct: 378 RFLAQYPNSKYT 389


>gi|283779529|ref|YP_003370284.1| hypothetical protein Psta_1749 [Pirellula staleyi DSM 6068]
 gi|283437982|gb|ADB16424.1| hypothetical protein Psta_1749 [Pirellula staleyi DSM 6068]
          Length = 443

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 72/167 (43%), Gaps = 10/167 (5%)

Query: 75  KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
           +A    ++   D P   +A  + L +A   +++GK+ +A     +    YP S++    +
Sbjct: 225 QALRVLDKIRIDDPTGRLADDATLAAANEHFASGKWTKADDWYTDLRQAYPTSEHQFLAH 284

Query: 135 YLVGM-SYAQMIRDVPYDQRATKLMLQYMSRIVERYTN-----SPYVKGARFYVTVGRNQ 188
           YL G+ +         Y   +     + + +I  ++ N     S ++  A   +   +  
Sbjct: 285 YL-GLKAKLNSYMGPDYSANSLDEAEKLIKQIRRQFPNEAAKESDFLDRAAAEIRYKK-- 341

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
            A K   +  YY KRGEY AA   ++ + A++SD   +  +  RL E
Sbjct: 342 -AEKVWNVASYYDKRGEYRAAAHHYRRIAADFSDTPFSSRSDQRLAE 387



 Score = 43.2 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 41/112 (36%), Gaps = 20/112 (17%)

Query: 35  LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY---------------EY 79
           L       +         D +  +++Y +A        + +A                  
Sbjct: 77  LSLKNLGKTTKRLAGQGPDRKLAQQLYREAEEL-----YKEAAAAEGSRRKEMFFAAAAK 131

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           F + +  +P + + + +L M+    +   +Y +A +  E  I QYP ++++D
Sbjct: 132 FEEAADRWPSSALEQDALFMTGESYFFCDEYPEANTFYERLIKQYPNNRHLD 183


>gi|189218837|ref|YP_001939478.1| TPR repeats containing protein [Methylacidiphilum infernorum V4]
 gi|189185695|gb|ACD82880.1| TPR repeats containing protein [Methylacidiphilum infernorum V4]
          Length = 771

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 57/164 (34%), Gaps = 21/164 (12%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKA---------VLFLKE 70
            K  L    ++A C    W+    ++               Y +            +L +
Sbjct: 208 TKDPLAKSKALARCGWAAWKSGQPKEAERFFTQASGGPP--YTEGNRLANSGLFQFYLSQ 265

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           + + +A +++ + S  F       K LL           Y +A +L + +I +YP S  V
Sbjct: 266 KRYKEAIQFYEKHSNGFIETE-KEKLLLDLVNAYLEIKDYAKALTLLDSFIAEYPRSALV 324

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
           D   Y   +++  + R           +   + +   +Y +SPY
Sbjct: 325 DLAAYERVLAHYYLDRSS---------LETNIEQFSLQYPSSPY 359



 Score = 42.4 bits (99), Expect = 0.068,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 2/72 (2%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM-SAFVQYSAGKYQQAASLGE 118
           +Y KA  + +   FS A   + +       + V+ +++LM  A   Y   K+ +AASL +
Sbjct: 364 LYLKAEDYNRTGRFSLALPLWEKLDSVHS-SFVSPEAILMGKANSNYGLEKWAEAASLYK 422

Query: 119 EYITQYPESKNV 130
            ++T YP SK V
Sbjct: 423 SFLTGYPHSKEV 434



 Score = 40.5 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 72/222 (32%), Gaps = 23/222 (10%)

Query: 38  WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC-SRDFPFAGVARKS 96
                S +    S  +       Y  A   LK++   +A  YF +      P       S
Sbjct: 566 CSYVQSYEDNYKSGAETIPTELYYWIASQLLKKEKREQAALYFKKVVQSANPKDKYYSSS 625

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
           L + A  +     +++A +   E+    P S +   V  L+G++  Q+            
Sbjct: 626 LWLLAETERKLMNWKEANTYYLEFQKSDPNSASNSPV--LLGLAETQIALG------QFA 677

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              + +  ++ +         AR              + IG  YL +  Y  A   +  +
Sbjct: 678 EAQKNLEEVMLKEPEGENNAKAR--------------MLIGDSYLAQKNYREAAKAYTTL 723

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
              Y D      AM +   ++      D+A      ++E+YP
Sbjct: 724 SLIYQDDHITPRAMQKAALSFSKAGDNDQAAFWEKKLKEKYP 765



 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 65/219 (29%), Gaps = 17/219 (7%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
            +    S+  V       ++A+   ++  + +A   F +             +L   A  
Sbjct: 21  SEKVNPSIEIVPTADLELDRAIALYRQGRYEEAIRVFYRILPQLSPGKKTE-ALFSMADC 79

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD----------VPYDQR 153
               GK  +A  + +  I   P S  V   Y+  G   ++              V     
Sbjct: 80  YRLIGKKAEAIRIYQLLIQNDPSSAFVPTAYFWEGKLLSEQGDFAKAAPALKIAVEKGDP 139

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR----YYLKRGEYVAA 209
            T     +   + +    +   +   + +    ++     VE       YY    ++  A
Sbjct: 140 QTSQAASFFLALCQL--QTKEEEKGVYRLRELVDKAPDLRVEAAGVLATYYESILDWAHA 197

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           +  + +V+    D     +A+AR   A        EA  
Sbjct: 198 LEYWSVVVRETKDPLAKSKALARCGWAAWKSGQPKEAER 236


>gi|66044665|ref|YP_234506.1| TPR repeat-containing protein [Pseudomonas syringae pv. syringae
           B728a]
 gi|63255372|gb|AAY36468.1| TPR repeat [Pseudomonas syringae pv. syringae B728a]
          Length = 248

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 8/136 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D   ++  YE A   +K ++F KA + F    R +P +  A  +      V  + G 
Sbjct: 121 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 180

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            Q A     +   QYP+   V    Y +         DV      T  +   + ++V +Y
Sbjct: 181 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 232

Query: 170 TNSPYVKGARFYVTVG 185
             +   + A+  +   
Sbjct: 233 PGTSAAQLAQRDLQRL 248



 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
             +I+   +D        Q  +  + +Y NS Y   A++++      LA  +++      
Sbjct: 136 FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 182

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
                  A   F  V   Y       +++ +L +    L   D+ + ++  +  +YP   
Sbjct: 183 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 236

Query: 262 WARYVETLVK 271
            A+  +  ++
Sbjct: 237 AAQLAQRDLQ 246


>gi|187251318|ref|YP_001875800.1| hypothetical protein Emin_0908 [Elusimicrobium minutum Pei191]
 gi|186971478|gb|ACC98463.1| hypothetical protein Emin_0908 [Elusimicrobium minutum Pei191]
          Length = 209

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/158 (12%), Positives = 49/158 (31%), Gaps = 10/158 (6%)

Query: 30  IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
           + +  L G     +        T+       Y       ++ N+ +A   + +   +   
Sbjct: 62  LTMAILFGEPENLTAVTEKYPKTNAALYAAYY-MGDYNYEQGNYPEAVSLYKKV-AEGKN 119

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
             +A  + +  A    +   Y+ +    E++I + P+   +  VY    +S     +   
Sbjct: 120 KELAHVAQISLAAAYQANKDYEASILTAEDFINKNPQHYAIAQVYLTKALSQELAGKK-- 177

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
                 +        I  R+ N+ +   A+  +     
Sbjct: 178 ------EAAAADYKIIESRFPNTYFAAFAKNKLKELNK 209


>gi|241760457|ref|ZP_04758550.1| periplasmic protein [Neisseria flavescens SK114]
 gi|241318961|gb|EER55463.1| periplasmic protein [Neisseria flavescens SK114]
          Length = 251

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 50/134 (37%), Gaps = 13/134 (9%)

Query: 48  LDSVTDVRYQREV--YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
           + S TD   Q E+  Y +A  + +  NFS A     +       + +AR+++ +    Q 
Sbjct: 121 VPSETDSAAQNELRLYNQAQKYYQRNNFSAAVAILKEADGGN-GSEIARRNMYLLLQSQQ 179

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSR 164
             G  +    +G  Y  ++  S       Y +G    +   +D+               +
Sbjct: 180 RLGNCESVIEIGNRYANRFRNSPQAPDAMYSIGQCQYKLQQKDIAR---------STWRK 230

Query: 165 IVERYTNSPYVKGA 178
           +++ + NS   K A
Sbjct: 231 LIQSFPNSEAAKRA 244



 Score = 42.0 bits (98), Expect = 0.088,   Method: Composition-based stats.
 Identities = 19/150 (12%), Positives = 42/150 (28%), Gaps = 48/150 (32%)

Query: 170 TNSPYVKGARFYVTVG---------RNQLAAKEVEI---GRYYLKRGEYVAA-------- 209
             +  +   +  +             +  A  E+ +    + Y +R  + AA        
Sbjct: 100 PKAQRLDDRKLKMNYLANGGGVPSETDSAAQNELRLYNQAQKYYQRNNFSAAVAILKEAD 159

Query: 210 ------IPR---------------FQLVLA-------NYSDAEHAEEAMARLVEAYVALA 241
                 I R                + V+         + ++  A +AM  + +    L 
Sbjct: 160 GGNGSEIARRNMYLLLQSQQRLGNCESVIEIGNRYANRFRNSPQAPDAMYSIGQCQYKLQ 219

Query: 242 LMDEAREVVSLIQERYPQGYWARYVETLVK 271
             D AR     + + +P    A+     +K
Sbjct: 220 QKDIARSTWRKLIQSFPNSEAAKRASISLK 249


>gi|120612057|ref|YP_971735.1| hypothetical protein Aave_3404 [Acidovorax citrulli AAC00-1]
 gi|120590521|gb|ABM33961.1| Tetratricopeptide TPR_2 repeat protein [Acidovorax citrulli
           AAC00-1]
          Length = 268

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 46/132 (34%), Gaps = 8/132 (6%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
             ++  +E A+   +   F  A   F    R +P +G    +       QY+   Y++A 
Sbjct: 145 PAEKRDFEAALAVFRSGKFPDAVSAFGNFLRQYPRSGYVPSARFWLGNAQYATRDYKEAI 204

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
           +  +  +   P+            +S    I +   + + T+   + +  ++  Y  S  
Sbjct: 205 NNFKALLAASPDHARAPEA----ALS----IANCQIELKDTRAARKTLEDLLRAYPQSEA 256

Query: 175 VKGARFYVTVGR 186
              A+  +   +
Sbjct: 257 AAAAKERLARLK 268



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 46/143 (32%), Gaps = 22/143 (15%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           A K    +A   + +GK+  A S    ++ QYP S  V    + +G +            
Sbjct: 146 AEKRDFEAALAVFRSGKFPDAVSAFGNFLRQYPRSGYVPSARFWLGNAQYAT-------- 197

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           R  K  +     ++    +      A   +   + +L               +  AA   
Sbjct: 198 RDYKEAINNFKALLAASPDHARAPEAALSIANCQIEL--------------KDTRAARKT 243

Query: 213 FQLVLANYSDAEHAEEAMARLVE 235
            + +L  Y  +E A  A  RL  
Sbjct: 244 LEDLLRAYPQSEAAAAAKERLAR 266



 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 37/105 (35%), Gaps = 14/105 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             +      + +Y  S YV  ARF++   +                  +Y  AI  F+ +
Sbjct: 165 DAVSAFGNFLRQYPRSGYVPSARFWLGNAQ--------------YATRDYKEAINNFKAL 210

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           LA   D   A EA   +    + L     AR+ +  +   YPQ  
Sbjct: 211 LAASPDHARAPEAALSIANCQIELKDTRAARKTLEDLLRAYPQSE 255


>gi|253997442|ref|YP_003049506.1| tol-pal system protein YbgF [Methylotenera mobilis JLW8]
 gi|253984121|gb|ACT48979.1| tol-pal system protein YbgF [Methylotenera mobilis JLW8]
          Length = 269

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 43/116 (37%), Gaps = 14/116 (12%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           K       + ++ Y NS     A + +   +  L                Y ++I   Q 
Sbjct: 162 KDAFNTYDKFLKDYPNSSSASEAMYGLGYSQFAL--------------KNYKSSIATQQK 207

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           ++  Y+D+    +AM  +  + + L L+  A++ +  +  ++P        +  +K
Sbjct: 208 LIDTYADSPKVPDAMFNMANSQIQLGLVPGAKKTLRDLIAKFPNSELTPAAQKRLK 263



 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 52/134 (38%), Gaps = 8/134 (5%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
                + ++ E A    KE     A+  +++  +D+P +  A +++    + Q++   Y+
Sbjct: 140 EKNTQEYQLLELANGLSKESKHKDAFNTYDKFLKDYPNSSSASEAMYGLGYSQFALKNYK 199

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            + +  ++ I  Y +S  V    + +  S  Q+               + +  ++ ++ N
Sbjct: 200 SSIATQQKLIDTYADSPKVPDAMFNMANSQIQL--------GLVPGAKKTLRDLIAKFPN 251

Query: 172 SPYVKGARFYVTVG 185
           S     A+  +   
Sbjct: 252 SELTPAAQKRLKAL 265



 Score = 45.5 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 52/137 (37%), Gaps = 22/137 (16%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
           LL  A       K++ A +  ++++  YP S +     Y +G S   +        +  K
Sbjct: 148 LLELANGLSKESKHKDAFNTYDKFLKDYPNSSSASEAMYGLGYSQFAL--------KNYK 199

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             +    ++++ Y +SP V  A F +   + QL              G    A    + +
Sbjct: 200 SSIATQQKLIDTYADSPKVPDAMFNMANSQIQL--------------GLVPGAKKTLRDL 245

Query: 217 LANYSDAEHAEEAMARL 233
           +A + ++E    A  RL
Sbjct: 246 IAKFPNSELTPAAQKRL 262


>gi|330896137|gb|EGH28358.1| tol-pal system protein YbgF [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 253

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 8/136 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D   ++  YE A   +K ++F KA + F    R +P +  A  +      V  + G 
Sbjct: 126 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 185

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            Q A     +   QYP+   V    Y +         DV      T  +   + ++V +Y
Sbjct: 186 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 237

Query: 170 TNSPYVKGARFYVTVG 185
             +   + A+  +   
Sbjct: 238 PGTSAAQLAQRDLQRL 253



 Score = 47.8 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
             +I+   +D        Q  +  + +Y NS Y   A++++      LA  +++      
Sbjct: 141 FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 187

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
                  A   F  V   Y       +++ +L +    L   D+ + ++  +  +YP   
Sbjct: 188 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 241

Query: 262 WARYVETLVK 271
            A+  +  ++
Sbjct: 242 AAQLAQRDLQ 251


>gi|330892248|gb|EGH24909.1| tol-pal system protein YbgF [Pseudomonas syringae pv. mori str.
           301020]
          Length = 248

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 8/136 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D   ++  YE A   +K ++F KA + F    R +P +  A  +      V  + G 
Sbjct: 121 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 180

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            Q A     +   QYP+   V    Y +         DV      T  +   + ++V +Y
Sbjct: 181 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 232

Query: 170 TNSPYVKGARFYVTVG 185
             +   + A+  +   
Sbjct: 233 PGTSAAQLAQRDLQRL 248



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
             +I+   +D        Q  +  + +Y NS Y   A++++      LA  +++      
Sbjct: 136 FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 182

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
                  A   F  V   Y       +++ +L +    L   D+ + ++  +  +YP   
Sbjct: 183 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 236

Query: 262 WARYVETLVK 271
            A+  +  ++
Sbjct: 237 AAQLAQRDLQ 246


>gi|270295358|ref|ZP_06201559.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270274605|gb|EFA20466.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 1014

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 33/73 (45%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
             +YEK   +++  N  +A   F +    +P + V+RK+      + Y    Y +A    
Sbjct: 633 NALYEKGRSYVQSNNSRQAIATFRELLAKYPESPVSRKAAAEIGLLYYQNDDYDRAIEAY 692

Query: 118 EEYITQYPESKNV 130
           +  +TQYP S+  
Sbjct: 693 KHVVTQYPGSEEA 705



 Score = 54.4 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 71/226 (31%), Gaps = 50/226 (22%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM-------SAFVQYSAGK--- 109
            Y    +   ++++S A   F                 L         A      G    
Sbjct: 524 YYNLGYIAFHQKDYSTAENRFRNF------------VQLEKGENPTALADAYNRIGDCNL 571

Query: 110 ----YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               +++A     +       +   DY  Y + + Y          Q+     +  + R+
Sbjct: 572 HVRRFEEAKQYYAKAENLN--TPAGDYAVYQLALVYGM--------QKNYTEKVSMLDRL 621

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
             +Y NSPY            N L  K    GR Y++      AI  F+ +LA Y ++  
Sbjct: 622 AAKYPNSPYA----------INALYEK----GRSYVQSNNSRQAIATFRELLAKYPESPV 667

Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           + +A A +   Y      D A E    +  +YP    AR     +K
Sbjct: 668 SRKAAAEIGLLYYQNDDYDRAIEAYKHVVTQYPGSEEARLAMRDLK 713



 Score = 52.8 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 49/126 (38%), Gaps = 8/126 (6%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           VY+ A+++  ++N+++     ++ +  +P +  A  +L         +   +QA +   E
Sbjct: 598 VYQLALVYGMQKNYTEKVSMLDRLAAKYPNSPYAINALYEKGRSYVQSNNSRQAIATFRE 657

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            + +YPES         +G+ Y     D           ++    +V +Y  S   + A 
Sbjct: 658 LLAKYPESPVSRKAAAEIGLLYY-QNDDYDR-------AIEAYKHVVTQYPGSEEARLAM 709

Query: 180 FYVTVG 185
             +   
Sbjct: 710 RDLKSI 715



 Score = 40.5 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 29/235 (12%), Positives = 72/235 (30%), Gaps = 38/235 (16%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAAS 115
           +++          F +A  YFNQ            ++   + +      Y   + ++AA 
Sbjct: 447 LFQLGTQSFANTQFEQAIGYFNQSVTL---GQYNLQTKADALYWLGESYYRLNRMREAAR 503

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQM--IRDVPYDQRATKLMLQYMSRIVERYTNSP 173
              EY++     ++ +    +  ++Y  +  I     D    +   +   ++ +    +P
Sbjct: 504 NFNEYLSL-TRQRDTE----MFALAYYNLGYIAFHQKDYSTAENRFRNFVQLEKG--ENP 556

Query: 174 YV-KGARFYVTVGRNQLAAKE---------------------VEIGRYYLKRGEYVAAIP 211
                A   +      +   E                      ++   Y  +  Y   + 
Sbjct: 557 TALADAYNRIGDCNLHVRRFEEAKQYYAKAENLNTPAGDYAVYQLALVYGMQKNYTEKVS 616

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
               + A Y ++ +A  A+     +YV      +A      +  +YP+   +R  
Sbjct: 617 MLDRLAAKYPNSPYAINALYEKGRSYVQSNNSRQAIATFRELLAKYPESPVSRKA 671



 Score = 39.7 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 38/271 (14%), Positives = 85/271 (31%), Gaps = 74/271 (27%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL--LMSAFVQ 104
           Y +S    +   E+    +L+ +  ++ +A E +      +P +  AR ++  L S +V 
Sbjct: 662 YPESPVSRKAAAEI---GLLYYQNDDYDRAIEAYKHVVTQYPGSEEARLAMRDLKSIYVD 718

Query: 105 ------------------------------------YSAGKYQQAASLGEEYITQYPESK 128
                                               Y  G+   A      Y+  YP   
Sbjct: 719 ANRVDEFAALAAQMPGEIRFEPSEQDSLTYIAAEKVYMKGEATPAKESFTRYLQSYPGGA 778

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
                +Y + +        +  +Q+  + +L++  +++E Y ++PY + A          
Sbjct: 779 FSLNAHYYLCV--------IGKEQKDEEAVLEHAGKLLE-YPDNPYSEEALLMHGEILFN 829

Query: 189 LAAKEVEIGRY-YLKRGEYVA----------------------AIPRFQLVLANYSDAEH 225
               ++ +  Y  L+     A                       I     +LA    +  
Sbjct: 830 RQQYDLALADYKKLQAKATTAERRQLGAIGVLRCGALMHDDAEVINAATALLAEAKLSPE 889

Query: 226 AE-EAMARLVEAYVALALMDEAREVVSLIQE 255
              EA+    +AY+      +A + + L+ +
Sbjct: 890 LRNEALYYRAKAYLNQKADKKAMDDLQLLAK 920



 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 72/214 (33%), Gaps = 19/214 (8%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFA-GVARKSLLM--SAFVQYSAGKYQQAASLG 117
           Y  A ++L ++ + KA           P        + L       +Y  GKY +A    
Sbjct: 221 YYIAEIYLLKKQYDKAEIVAQNALSAHPDGLSYTHTAELNRILGTAEYHFGKYHEAVKSF 280

Query: 118 EEYITQYPESK-NVDYVYYLVGMSYAQ-----MIRDVPYDQRATKLMLQYMSRIVERYTN 171
            +YI    ES  +     Y++GMSY Q      +  V     A    L   + +      
Sbjct: 281 GQYIEHNAESAAHRRDALYMLGMSYYQCGVYSQVPSVLGRVTAENDALSQNAYLHMGLAY 340

Query: 172 SPYVKGARFYVTVGRNQLAAKEVEI---GRYYLKR-------GEYVAAIPRFQLVLANYS 221
                  +  +   +   +  ++++     Y             +  ++  F+  L  + 
Sbjct: 341 LQLADKTKARMAFEQAAASNADMKVKEQAAYNYALCIHETSYSAFGESVTVFEKFLNEFP 400

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           ++ +AE+    LVE Y+     D A + +  I  
Sbjct: 401 NSPYAEKVSNYLVEVYMNTRSYDAALKSIDRISH 434



 Score = 36.2 bits (83), Expect = 4.3,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 61/220 (27%), Gaps = 34/220 (15%)

Query: 75  KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
           K+ +       ++P    A +   + A   +  G Y  A ++          S+  D + 
Sbjct: 92  KSIDLLRAFLDEYPDTPHANRIYALIASAYFFEGNYDDALAMFNSVRLDLLGSEERDDMT 151

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE- 193
           Y +   Y +            K    +   +  R T+  Y     +Y++  R      + 
Sbjct: 152 YRLATCYLKT--------GNVKEAAIWFETL--RSTSRKYTADCAYYISYIRYTQGRYDE 201

Query: 194 -------------------VEIGRYYLKRGEYVAAIPRFQLVLANYSD---AEHAEEAMA 231
                                I   YL + +Y  A    Q  L+ + D     H  E   
Sbjct: 202 ALSGFLPLQDNAKYKDLVPYYIAEIYLLKKQYDKAEIVAQNALSAHPDGLSYTHTAELNR 261

Query: 232 RLVEAYVALALMDEA-REVVSLIQERYPQGYWARYVETLV 270
            L  A        EA +     I+         R    ++
Sbjct: 262 ILGTAEYHFGKYHEAVKSFGQYIEHNAESAAHRRDALYML 301


>gi|153008552|ref|YP_001369767.1| Tol-Pal system YbgF [Ochrobactrum anthropi ATCC 49188]
 gi|151560440|gb|ABS13938.1| Tol-Pal system YbgF [Ochrobactrum anthropi ATCC 49188]
          Length = 505

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 51/140 (36%), Gaps = 8/140 (5%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
                     ++    + S+        +Y+ +  +L   ++  A   F +  + +P   
Sbjct: 356 GAAPGATSGGNAAGDTVASLPTDDNPSSLYQASYQYLMSGDYKAAETGFREHVKRYPADP 415

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
              ++        Y  G+Y +AA++  +    YP+SK      + +GM+  +M      D
Sbjct: 416 NTAEARFWLGESLYGQGRYPEAATVFIDTQRDYPDSKRAPENMFKLGMTLEKMDN---RD 472

Query: 152 QRATKLMLQYMSRIVERYTN 171
                +     ++I ERY  
Sbjct: 473 -----VACATFAQIPERYPK 487



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 29/79 (36%), Gaps = 3/79 (3%)

Query: 194 VEIGRY-YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           +    Y YL  G+Y AA   F+  +  Y    +  EA   L E+        EA  V   
Sbjct: 384 LYQASYQYLMSGDYKAAETGFREHVKRYPADPNTAEARFWLGESLYGQGRYPEAATVFID 443

Query: 253 IQERYPQGYWARYVETLVK 271
            Q  YP     R  E + K
Sbjct: 444 TQRDYPDSK--RAPENMFK 460



 Score = 40.5 bits (94), Expect = 0.24,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 31/98 (31%), Gaps = 8/98 (8%)

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           +    +G Y+ A +   E++ +YP   N     + +G S     R               
Sbjct: 389 YQYLMSGDYKAAETGFREHVKRYPADPNTAEARFWLGESLYGQGRYP--------EAATV 440

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
                  Y +S       F + +   ++  ++V    +
Sbjct: 441 FIDTQRDYPDSKRAPENMFKLGMTLEKMDNRDVACATF 478



 Score = 40.1 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 36/107 (33%), Gaps = 14/107 (13%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         V+RY   P    ARF++                    +G Y  A   
Sbjct: 395 GDYKAAETGFREHVKRYPADPNTAEARFWLGESL--------------YGQGRYPEAATV 440

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           F     +Y D++ A E M +L      +   D A    + I ERYP+
Sbjct: 441 FIDTQRDYPDSKRAPENMFKLGMTLEKMDNRDVACATFAQIPERYPK 487


>gi|189423894|ref|YP_001951071.1| tol-pal system protein YbgF [Geobacter lovleyi SZ]
 gi|189420153|gb|ACD94551.1| tol-pal system protein YbgF [Geobacter lovleyi SZ]
          Length = 271

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 52/147 (35%), Gaps = 22/147 (14%)

Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
           P  +      YL G+   +       D  + +  L      +E+      V  AR++   
Sbjct: 144 PGKEATADALYLKGLESFK-----GGDMPSARTQLTSF---IEKNPGHDLVPNARYW--- 192

Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
                      IG  Y     Y  AI  FQ V+  Y   E A  AM +   ++ AL  + 
Sbjct: 193 -----------IGETYYGEKNYEQAILEFQEVVKQYPKKEKAPAAMLKQALSFKALKDLK 241

Query: 245 EAREVVSLIQERYPQGYWARYVETLVK 271
             + ++  +   YP+   A+    ++K
Sbjct: 242 STQYLLKRLIGDYPKSDEAKKARVILK 268



 Score = 52.8 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 44/137 (32%), Gaps = 8/137 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           +         +Y K +   K  +   A           P   +   +        Y    
Sbjct: 143 APGKEATADALYLKGLESFKGGDMPSARTQLTSFIEKNPGHDLVPNARYWIGETYYGEKN 202

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y+QA    +E + QYP+ +          +S+  +      D ++T+     + R++  Y
Sbjct: 203 YEQAILEFQEVVKQYPKKEKAPAAMLKQALSFKAL-----KDLKSTQY---LLKRLIGDY 254

Query: 170 TNSPYVKGARFYVTVGR 186
             S   K AR  +   +
Sbjct: 255 PKSDEAKKARVILKEVK 271


>gi|306844685|ref|ZP_07477270.1| tol-pal system protein YbgF [Brucella sp. BO1]
 gi|306274857|gb|EFM56627.1| tol-pal system protein YbgF [Brucella sp. BO1]
          Length = 484

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 51/130 (39%), Gaps = 8/130 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           S+    + S+        +Y+ A  +L   ++  A   F +  + +P   +  ++     
Sbjct: 345 SAASDAVASLPTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLG 404

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
              Y  G+Y +AA+L  +    YP+SK      + +GM+  +M            +    
Sbjct: 405 ESLYGQGRYPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNH--------DVACAT 456

Query: 162 MSRIVERYTN 171
            ++I +RY  
Sbjct: 457 FAQIPQRYPK 466



 Score = 43.6 bits (102), Expect = 0.030,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 8/104 (7%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           SL  +A+    +G Y+ A +   E++ +YP         + +G S     R         
Sbjct: 362 SLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYP------- 414

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
                        Y +S       F + +   ++   +V    +
Sbjct: 415 -EAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATF 457



 Score = 39.3 bits (91), Expect = 0.62,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 14/107 (13%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         V+RY   P    ARF++                    +G Y  A   
Sbjct: 374 GDYKAAEAGFREHVKRYPADPMTAEARFWLGESL--------------YGQGRYPEAATL 419

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           F     +Y D++ A E M +L  A   +   D A    + I +RYP+
Sbjct: 420 FIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYPK 466



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 23/68 (33%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +    YL  G+Y AA   F+  +  Y       EA   L E+        EA  +    
Sbjct: 364 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 423

Query: 254 QERYPQGY 261
           Q  YP   
Sbjct: 424 QRDYPDSK 431


>gi|302130602|ref|ZP_07256592.1| tol-pal system protein YbgF [Pseudomonas syringae pv. tomato NCPPB
           1108]
          Length = 248

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 8/136 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D   ++  YE A   +K ++F KA + F    R +P +  A  +      V  + G 
Sbjct: 121 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 180

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            Q A     +   QYP+   V    Y +         DV      T  +   + ++V +Y
Sbjct: 181 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 232

Query: 170 TNSPYVKGARFYVTVG 185
             +   + A+  +   
Sbjct: 233 PGTSAAQLAQRDLQRL 248



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
             +I+   +D        Q  +  + +Y NS Y   A++++      LA  +++      
Sbjct: 136 FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 182

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
                  A   F  V   Y       +++ +L +    L   D+ + ++  +  +YP   
Sbjct: 183 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 236

Query: 262 WARYVETLVK 271
            A+  +  ++
Sbjct: 237 AAQLAQRDLQ 246


>gi|325107898|ref|YP_004268966.1| hypothetical protein Plabr_1332 [Planctomyces brasiliensis DSM
           5305]
 gi|324968166|gb|ADY58944.1| hypothetical protein Plabr_1332 [Planctomyces brasiliensis DSM
           5305]
          Length = 532

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 81/239 (33%), Gaps = 43/239 (17%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPF---------------------------AGVA 93
           YEKA    ++ +F  A   F   ++D+                               + 
Sbjct: 83  YEKAQAMYEQGDFKGAETAFEDITQDYATDESGFFRRRRLGNILKPKSALQASYYDNPLV 142

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD---YVYYLVGMSYAQMIRDVPY 150
             SL M A  +Y   K   A S+  + + QYP ++++D      + + M++         
Sbjct: 143 EDSLFMLAESRYKQEKLPGAESVYIQLLQQYPNTRHLDKSTERLFDIAMTWMDFKTTTSD 202

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
           + +         +   E  +NS Y + + F +  G+      E   GR          A+
Sbjct: 203 EVKVASHSDTGRASKPEVVSNSDYERPSFFNMFDGKRPWTDTE---GR----------AL 249

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
              + +  N      A++A+      Y+ +    EA E   +++E +P     +    L
Sbjct: 250 EALKAIWMNDPTGPLADDALMLTASHYLRVGRHAEASETFRMLREEFPDSPHLKDAYVL 308



 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 70/165 (42%), Gaps = 6/165 (3%)

Query: 75  KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
           +A E       + P   +A  +L+++A      G++ +A+        ++P+S ++    
Sbjct: 247 RALEALKAIWMNDPTGPLADDALMLTASHYLRVGRHAEASETFRMLREEFPDSPHLKDA- 305

Query: 135 YLVGMSYAQMI--RDVPYDQRATKLMLQYMSRIVERYTN-SPYVKGARFYVTVGRNQLA- 190
           Y++G SY      +   Y+ R+     +  +R +  + + SP  +          +  A 
Sbjct: 306 YVLG-SYVTQASYQGAAYEDRSLIESRELKTRALTMFRDLSPEERKRLEEEVYRVDDAAV 364

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
           A+E E   YYL +G + A       ++  Y  +++A +A   L +
Sbjct: 365 AREFERSLYYLNKGNFDAVEMYCNYIVNKYPQSKYAGKARGLLAQ 409


>gi|149927734|ref|ZP_01915986.1| hypothetical protein LMED105_16053 [Limnobacter sp. MED105]
 gi|149823560|gb|EDM82790.1| hypothetical protein LMED105_16053 [Limnobacter sp. MED105]
          Length = 248

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/145 (14%), Positives = 48/145 (33%), Gaps = 10/145 (6%)

Query: 44  RDVYLDSVTDVRYQREV--YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           + V LD         +   Y+  +   K  N+  A   F      +  + +  +      
Sbjct: 112 KAVQLDGEELTVPPEQFNDYQAGLDHFKAGNYKDAALQFQDFLNKYKQSKLEPQVRYFLG 171

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
             Q++ G+Y+ A     +    +P+S           +S A    ++           + 
Sbjct: 172 STQFAQGEYKTALVTQRDLAKDFPDSPRAPDAL----LSMASSQLELKSIPG----AKKT 223

Query: 162 MSRIVERYTNSPYVKGARFYVTVGR 186
           +  ++ +Y NSP    A+  +   +
Sbjct: 224 LGELIAKYPNSPAAASAKARLEALK 248



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 42/127 (33%), Gaps = 22/127 (17%)

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
           Y  G+ + +            K         + +Y  S      R               
Sbjct: 131 YQAGLDHFKA--------GNYKDAALQFQDFLNKYKQSKLEPQVR--------------Y 168

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
            +G     +GEY  A+   + +  ++ D+  A +A+  +  + + L  +  A++ +  + 
Sbjct: 169 FLGSTQFAQGEYKTALVTQRDLAKDFPDSPRAPDALLSMASSQLELKSIPGAKKTLGELI 228

Query: 255 ERYPQGY 261
            +YP   
Sbjct: 229 AKYPNSP 235



 Score = 46.3 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 51/146 (34%), Gaps = 28/146 (19%)

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
           F     ++ L      + AG Y+ AA   ++++ +Y +SK    V Y +G +        
Sbjct: 128 FNDY--QAGLD----HFKAGNYKDAALQFQDFLNKYKQSKLEPQVRYFLGSTQFA----- 176

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
              Q   K  L     + + + +SP    A   +   +              L+      
Sbjct: 177 ---QGEYKTALVTQRDLAKDFPDSPRAPDALLSMASSQ--------------LELKSIPG 219

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLV 234
           A      ++A Y ++  A  A ARL 
Sbjct: 220 AKKTLGELIAKYPNSPAAASAKARLE 245


>gi|320323044|gb|EFW79133.1| tol-pal system protein YbgF [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320329684|gb|EFW85673.1| tol-pal system protein YbgF [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 208

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 8/136 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D   ++  YE A   +K ++F KA + F    R +P +  A  +      V  + G 
Sbjct: 81  EPPDPTKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 140

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            Q A     +   QYP+   V    Y +         DV      T  +   + ++V +Y
Sbjct: 141 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 192

Query: 170 TNSPYVKGARFYVTVG 185
             +   + A+  +   
Sbjct: 193 PGTSAAQLAQRDLQRL 208



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
             +I+   +D        Q  +  + +Y NS Y   A++++      LA  +++      
Sbjct: 96  FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 142

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
                  A   F  V   Y       +++ +L +    L   D+ + ++  +  +YP   
Sbjct: 143 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 196

Query: 262 WARYVETLVK 271
            A+  +  ++
Sbjct: 197 AAQLAQRDLQ 206


>gi|152987540|ref|YP_001349883.1| TPR repeat-containing protein [Pseudomonas aeruginosa PA7]
 gi|150962698|gb|ABR84723.1| TPR repeat [Pseudomonas aeruginosa PA7]
          Length = 274

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 57/147 (38%), Gaps = 22/147 (14%)

Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
           P     + +YY        +I+   +D        Q  +  + +Y NS Y   A++++  
Sbjct: 147 PGDPAKEKLYYDAA---FDLIKSKDFD-----KASQAFTAFLRKYPNSQYSGNAQYWLGE 198

Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
               LA  +++             A   F  V  +Y  ++   +++ +L +    L   D
Sbjct: 199 VN--LAKGDLQ------------GAGQAFARVSQSYPSSQKVPDSLYKLADVERRLGNND 244

Query: 245 EAREVVSLIQERYPQGYWARYVETLVK 271
           +A+ ++  +  +YP    A+  +  +K
Sbjct: 245 KAKGILQQVISQYPGTSAAQLSQRDLK 271



 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 47/137 (34%), Gaps = 8/137 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D   ++  Y+ A   +K ++F KA + F    R +P +  +  +      V  + G 
Sbjct: 146 EPGDPAKEKLYYDAAFDLIKSKDFDKASQAFTAFLRKYPNSQYSGNAQYWLGEVNLAKGD 205

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            Q A          YP S+ V    Y +         DV             + +++ +Y
Sbjct: 206 LQGAGQAFARVSQSYPSSQKVPDSLYKLA--------DVERRLGNNDKAKGILQQVISQY 257

Query: 170 TNSPYVKGARFYVTVGR 186
             +   + ++  +   R
Sbjct: 258 PGTSAAQLSQRDLKNLR 274


>gi|312796782|ref|YP_004029704.1| Tol system periplasmic component YbgF [Burkholderia rhizoxinica HKI
           454]
 gi|312168557|emb|CBW75560.1| Tol system periplasmic component YbgF [Burkholderia rhizoxinica HKI
           454]
          Length = 249

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/132 (12%), Positives = 46/132 (34%), Gaps = 8/132 (6%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
             + + +  A+   K  +F  A   F      +P +     +        Y+   Y+ + 
Sbjct: 126 PGETDAFNAALQLFKNGDFKGATSGFKAFVSKYPNSPYQPTAQYWLGNALYAQRDYKAST 185

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
           ++ +  +T+YP           +  +  +  + V           + + +++ +Y+ S  
Sbjct: 186 TVWQGVVTKYPTHPRAPEALLAIANNQLEQGQKVS--------AKRTLGQVLAQYSGSNA 237

Query: 175 VKGARFYVTVGR 186
              A+  ++  R
Sbjct: 238 AHAAQSRLSQIR 249



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 49/131 (37%), Gaps = 22/131 (16%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           +  G ++ A S  + ++++YP S       Y +G +           QR  K        
Sbjct: 139 FKNGDFKGATSGFKAFVSKYPNSPYQPTAQYWLGNALYA--------QRDYKASTTVWQG 190

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V +Y   P    A               + I    L++G+ V+A      VLA YS + 
Sbjct: 191 VVTKYPTHPRAPEAL--------------LAIANNQLEQGQKVSAKRTLGQVLAQYSGSN 236

Query: 225 HAEEAMARLVE 235
            A  A +RL +
Sbjct: 237 AAHAAQSRLSQ 247



 Score = 45.1 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 38/109 (34%), Gaps = 14/109 (12%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         V +Y NSPY   A++++    N L          Y +R  Y A+   
Sbjct: 142 GDFKGATSGFKAFVSKYPNSPYQPTAQYWLG---NAL----------YAQRD-YKASTTV 187

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +Q V+  Y     A EA+  +    +       A+  +  +  +Y    
Sbjct: 188 WQGVVTKYPTHPRAPEALLAIANNQLEQGQKVSAKRTLGQVLAQYSGSN 236


>gi|302038647|ref|YP_003798969.1| putative tol-Pal system protein YbgF [Candidatus Nitrospira
           defluvii]
 gi|300606711|emb|CBK43044.1| putative Tol-Pal system protein YbgF [Candidatus Nitrospira
           defluvii]
          Length = 259

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 46/131 (35%), Gaps = 8/131 (6%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
                +  A        F  A   F +  +DFP   +   +        Y    Y +A  
Sbjct: 137 TPTSAFNLAYNDYLNGKFDLAVGGFQRFIKDFPSTSLTPNAHYWLGESYYGQKDYIRAMQ 196

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
             E  + +Y  ++ V    + +G+S A+           T    +Y+ R++E Y+ S   
Sbjct: 197 SFEHVVNEYAGNEKVPAALFKLGLSAAET--------GDTAKSRKYLKRVIEEYSTSDEA 248

Query: 176 KGARFYVTVGR 186
           K A+  +   R
Sbjct: 249 KLAKAKMAEIR 259



 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 48/137 (35%), Gaps = 22/137 (16%)

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
             A+  Y  GK+  A    + +I  +P +      +Y +G SY      +          
Sbjct: 143 NLAYNDYLNGKFDLAVGGFQRFIKDFPSTSLTPNAHYWLGESYYGQKDYI--------RA 194

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
           +Q    +V  Y  +  V  A F +           +         G+   +    + V+ 
Sbjct: 195 MQSFEHVVNEYAGNEKVPAALFKLG----------LSAAE----TGDTAKSRKYLKRVIE 240

Query: 219 NYSDAEHAEEAMARLVE 235
            YS ++ A+ A A++ E
Sbjct: 241 EYSTSDEAKLAKAKMAE 257



 Score = 45.1 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 43/112 (38%), Gaps = 14/112 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
           L +    R ++ + ++     A +++              G  Y  + +Y+ A+  F+ V
Sbjct: 156 LAVGGFQRFIKDFPSTSLTPNAHYWL--------------GESYYGQKDYIRAMQSFEHV 201

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           +  Y+  E    A+ +L  +        ++R+ +  + E Y     A+  + 
Sbjct: 202 VNEYAGNEKVPAALFKLGLSAAETGDTAKSRKYLKRVIEEYSTSDEAKLAKA 253


>gi|254000098|ref|YP_003052161.1| tol-pal system protein YbgF [Methylovorus sp. SIP3-4]
 gi|253986777|gb|ACT51634.1| tol-pal system protein YbgF [Methylovorus sp. SIP3-4]
          Length = 270

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 55/138 (39%), Gaps = 8/138 (5%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           +        + +  + A   L+   F ++++ + +  + +P +  A  ++    F Q+S 
Sbjct: 136 VTEAPASSSEAKDLDAANALLQASKFKESFDAYQKFLQAYPASTHAADAMYGLGFSQFSL 195

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
             Y+ A +  ++ + QYP+S       + +  S    I+    D        + +  ++ 
Sbjct: 196 KNYKAAIATQQKLLKQYPDSAKAPEASFNIANS---QIQLADID-----GAKKTLRDLIS 247

Query: 168 RYTNSPYVKGARFYVTVG 185
           +Y  S  +  A+  + V 
Sbjct: 248 QYPKSDVIPRAQSRLKVL 265



 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 45/116 (38%), Gaps = 14/116 (12%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           K       + ++ Y  S +   A + +   +  L                Y AAI   Q 
Sbjct: 162 KESFDAYQKFLQAYPASTHAADAMYGLGFSQFSL--------------KNYKAAIATQQK 207

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           +L  Y D+  A EA   +  + + LA +D A++ +  +  +YP+       ++ +K
Sbjct: 208 LLKQYPDSAKAPEASFNIANSQIQLADIDGAKKTLRDLISQYPKSDVIPRAQSRLK 263



 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 53/136 (38%), Gaps = 22/136 (16%)

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
           L +A     A K++++    ++++  YP S +     Y +G S   +        +  K 
Sbjct: 149 LDAANALLQASKFKESFDAYQKFLQAYPASTHAADAMYGLGFSQFSL--------KNYKA 200

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
            +    +++++Y +S     A F +   + QLA  +               A    + ++
Sbjct: 201 AIATQQKLLKQYPDSAKAPEASFNIANSQIQLADID--------------GAKKTLRDLI 246

Query: 218 ANYSDAEHAEEAMARL 233
           + Y  ++    A +RL
Sbjct: 247 SQYPKSDVIPRAQSRL 262


>gi|330815666|ref|YP_004359371.1| hypothetical protein bgla_1g07230 [Burkholderia gladioli BSR3]
 gi|327368059|gb|AEA59415.1| hypothetical protein bgla_1g07230 [Burkholderia gladioli BSR3]
          Length = 249

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/120 (11%), Positives = 38/120 (31%), Gaps = 8/120 (6%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
             T    + + +  A    +  +F  A   F      +P +     +       QY+   
Sbjct: 121 EGTVQPGETDAFNAASQQFRAGDFKGAAASFRAFIAKYPQSPYQPVAQYWLGNAQYALRD 180

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y+ + +  +  +  +P+          +G         +   Q+A     +   ++V ++
Sbjct: 181 YKGSTATWQALVKAFPQHPRAGDALVAIG------TNQLEQGQKAA--AKRTFEQVVSQF 232



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 47/119 (39%), Gaps = 22/119 (18%)

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           Q+ AG ++ AA+    +I +YP+S       Y +G +   +      D + +    Q   
Sbjct: 138 QFRAGDFKGAAASFRAFIAKYPQSPYQPVAQYWLGNAQYAL-----RDYKGSTATWQA-- 190

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
            +V+ +   P    A               V IG   L++G+  AA   F+ V++ +  
Sbjct: 191 -LVKAFPQHPRAGDAL--------------VAIGTNQLEQGQKAAAKRTFEQVVSQFQG 234



 Score = 35.9 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 12/107 (11%), Positives = 33/107 (30%), Gaps = 14/107 (13%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         + +Y  SPY   A++++       A   +          +Y  +   
Sbjct: 142 GDFKGAAASFRAFIAKYPQSPYQPVAQYWLGN-----AQYAL---------RDYKGSTAT 187

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           +Q ++  +     A +A+  +    +       A+     +  ++  
Sbjct: 188 WQALVKAFPQHPRAGDALVAIGTNQLEQGQKAAAKRTFEQVVSQFQG 234


>gi|256045304|ref|ZP_05448198.1| TPR repeat-containing protein [Brucella melitensis bv. 1 str.
           Rev.1]
          Length = 484

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 50/127 (39%), Gaps = 8/127 (6%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           +  + S+        +Y+ A  +L   ++  A   F +  + +P   +  ++        
Sbjct: 348 NDAVASLPTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESL 407

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y  G+Y +AA+L  +    YP+SK      + +GM+  +M            +     ++
Sbjct: 408 YGQGRYPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNH--------DVACATFAQ 459

Query: 165 IVERYTN 171
           I +RY  
Sbjct: 460 IPQRYPK 466



 Score = 43.6 bits (102), Expect = 0.029,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 8/104 (7%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           SL  +A+    +G Y+ A +   E++ +YP         + +G S     R         
Sbjct: 362 SLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYP------- 414

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
                        Y +S       F + +   ++   +V    +
Sbjct: 415 -EAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATF 457



 Score = 39.3 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 14/107 (13%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         V+RY   P    ARF++                    +G Y  A   
Sbjct: 374 GDYKAAEAGFREHVKRYPADPMTAEARFWLGESL--------------YGQGRYPEAATL 419

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           F     +Y D++ A E M +L  A   +   D A    + I +RYP+
Sbjct: 420 FIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYPK 466



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 23/68 (33%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +    YL  G+Y AA   F+  +  Y       EA   L E+        EA  +    
Sbjct: 364 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 423

Query: 254 QERYPQGY 261
           Q  YP   
Sbjct: 424 QRDYPDSK 431


>gi|313497576|gb|ADR58942.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
          Length = 266

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 52/136 (38%), Gaps = 8/136 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D   ++  Y+ A   +K+++F KA + FN   R +P +  A  +      V  + G 
Sbjct: 139 QPGDPAKEKLYYDAAFDLIKQKDFDKASQAFNAFLRKYPNSQYAGNAQYWLGEVNLAKGD 198

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            Q A+    +   +YP+   V    Y +         DV      T  +   + ++V +Y
Sbjct: 199 LQGASQAFAQVSQKYPKHSKVPDSLYKLA--------DVERRMGHTDKVKGILQQVVTQY 250

Query: 170 TNSPYVKGARFYVTVG 185
             +   + A+  +   
Sbjct: 251 PGTSAAQLAQRDLQKL 266



 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 45/120 (37%), Gaps = 14/120 (11%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           Q+      Q  +  + +Y NS Y   A++++      LA  +++             A  
Sbjct: 159 QKDFDKASQAFNAFLRKYPNSQYAGNAQYWLGEVN--LAKGDLQ------------GASQ 204

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
            F  V   Y       +++ +L +    +   D+ + ++  +  +YP    A+  +  ++
Sbjct: 205 AFAQVSQKYPKHSKVPDSLYKLADVERRMGHTDKVKGILQQVVTQYPGTSAAQLAQRDLQ 264


>gi|265991729|ref|ZP_06104286.1| tol-Pal system YbgF [Brucella melitensis bv. 1 str. Rev.1]
 gi|263002685|gb|EEZ15088.1| tol-Pal system YbgF [Brucella melitensis bv. 1 str. Rev.1]
          Length = 488

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 50/127 (39%), Gaps = 8/127 (6%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           +  + S+        +Y+ A  +L   ++  A   F +  + +P   +  ++        
Sbjct: 352 NDAVASLPTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESL 411

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y  G+Y +AA+L  +    YP+SK      + +GM+  +M            +     ++
Sbjct: 412 YGQGRYPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNH--------DVACATFAQ 463

Query: 165 IVERYTN 171
           I +RY  
Sbjct: 464 IPQRYPK 470



 Score = 43.6 bits (102), Expect = 0.029,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 8/104 (7%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           SL  +A+    +G Y+ A +   E++ +YP         + +G S     R         
Sbjct: 366 SLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYP------- 418

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
                        Y +S       F + +   ++   +V    +
Sbjct: 419 -EAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATF 461



 Score = 39.3 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 14/107 (13%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         V+RY   P    ARF++                    +G Y  A   
Sbjct: 378 GDYKAAEAGFREHVKRYPADPMTAEARFWLGESL--------------YGQGRYPEAATL 423

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           F     +Y D++ A E M +L  A   +   D A    + I +RYP+
Sbjct: 424 FIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYPK 470



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 23/68 (33%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +    YL  G+Y AA   F+  +  Y       EA   L E+        EA  +    
Sbjct: 368 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 427

Query: 254 QERYPQGY 261
           Q  YP   
Sbjct: 428 QRDYPDSK 435


>gi|238920736|ref|YP_002934251.1| tol-pal system protein YbgF, [Edwardsiella ictaluri 93-146]
 gi|238870305|gb|ACR70016.1| tol-pal system protein YbgF, putative [Edwardsiella ictaluri
           93-146]
          Length = 252

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 9/123 (7%)

Query: 61  YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y +AV   L ++   +A   F    + +P +     +      + YS GK   AA     
Sbjct: 137 YNRAVDLVLVKKQNDQAISAFQTFIKQYPDSTYQPNANYWLGQLFYSKGKKDDAAYYYAV 196

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       Y VG+        +  ++           +++++Y NS   K A+
Sbjct: 197 VVKNYPKSPKAAESMYKVGV--------IMQEKGQADKANAVYQQVIKQYPNSDAAKLAQ 248

Query: 180 FYV 182
             +
Sbjct: 249 KRM 251



 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 47/127 (37%), Gaps = 14/127 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
                D+   ++     +      +++Y +S Y   A +++                +Y 
Sbjct: 137 YNRAVDLVLVKKQNDQAISAFQTFIKQYPDSTYQPNANYWLGQL-------------FYS 183

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           K  +  AA   + +V+ NY  +  A E+M ++          D+A  V   + ++YP   
Sbjct: 184 KGKKDDAA-YYYAVVVKNYPKSPKAAESMYKVGVIMQEKGQADKANAVYQQVIKQYPNSD 242

Query: 262 WARYVET 268
            A+  + 
Sbjct: 243 AAKLAQK 249


>gi|330968883|gb|EGH68949.1| tol-pal system protein YbgF [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 208

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 8/136 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D   ++  YE A   +K ++F KA + F    R +P +  A  +      V  + G 
Sbjct: 81  EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 140

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            Q A     +   QYP+   V    Y +         DV      T  +   + ++V +Y
Sbjct: 141 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 192

Query: 170 TNSPYVKGARFYVTVG 185
             +   + A+  +   
Sbjct: 193 PGTSAAQLAQRDLQRL 208



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
             +I+   +D        Q  +  + +Y NS Y   A++++      LA  +++      
Sbjct: 96  FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 142

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
                  A   F  V   Y       +++ +L +    L   D+ + ++  +  +YP   
Sbjct: 143 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 196

Query: 262 WARYVETLVK 271
            A+  +  ++
Sbjct: 197 AAQLAQRDLQ 206


>gi|325105317|ref|YP_004274971.1| tetratricopeptide TPR_3 [Pedobacter saltans DSM 12145]
 gi|324974165|gb|ADY53149.1| tetratricopeptide TPR_3 [Pedobacter saltans DSM 12145]
          Length = 604

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 50/126 (39%), Gaps = 7/126 (5%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y KA    ++    +A    +   + +P   +A   LL  A +  +   Y+QA S  E+ 
Sbjct: 482 YAKAEFLREQHLHEQALSKLDSVLKAYPNTDLADDILLSKAKIYEAKRDYKQAISYYEKL 541

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
              +  S  +D   Y +G+ Y   I++        +    Y  ++++ +  S Y   AR 
Sbjct: 542 CNDFSNSIWIDDAIYNIGIIYQDKIQNN-------QSASLYYEKLIKDHPGSIYTIDARK 594

Query: 181 YVTVGR 186
              + R
Sbjct: 595 RFRLLR 600


>gi|26987959|ref|NP_743384.1| hypothetical protein PP_1224 [Pseudomonas putida KT2440]
 gi|60416287|sp|P0A130|Y1224_PSEPK RecName: Full=Uncharacterized protein PP_1224; Flags: Precursor
 gi|60416350|sp|P0A131|YOPRL_PSEPU RecName: Full=Uncharacterized protein in oprL 3'region; AltName:
           Full=ORF2; Flags: Precursor
 gi|24982672|gb|AAN66848.1|AE016313_7 conserved hypothetical protein [Pseudomonas putida KT2440]
 gi|861088|emb|CAA52295.1| hypothetical protein [Pseudomonas putida]
          Length = 268

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 52/136 (38%), Gaps = 8/136 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D   ++  Y+ A   +K+++F KA + FN   R +P +  A  +      V  + G 
Sbjct: 141 QPGDPAKEKLYYDAAFDLIKQKDFDKASQAFNAFLRKYPNSQYAGNAQYWLGEVNLAKGD 200

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            Q A+    +   +YP+   V    Y +         DV      T  +   + ++V +Y
Sbjct: 201 LQGASQAFAQVSQKYPKHSKVPDSLYKLA--------DVERRMGHTDKVKGILQQVVTQY 252

Query: 170 TNSPYVKGARFYVTVG 185
             +   + A+  +   
Sbjct: 253 PGTSAAQLAQRDLQKL 268



 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 45/120 (37%), Gaps = 14/120 (11%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           Q+      Q  +  + +Y NS Y   A++++      LA  +++             A  
Sbjct: 161 QKDFDKASQAFNAFLRKYPNSQYAGNAQYWLGEVN--LAKGDLQ------------GASQ 206

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
            F  V   Y       +++ +L +    +   D+ + ++  +  +YP    A+  +  ++
Sbjct: 207 AFAQVSQKYPKHSKVPDSLYKLADVERRMGHTDKVKGILQQVVTQYPGTSAAQLAQRDLQ 266


>gi|329956615|ref|ZP_08297188.1| tetratricopeptide repeat protein [Bacteroides clarus YIT 12056]
 gi|328523987|gb|EGF51063.1| tetratricopeptide repeat protein [Bacteroides clarus YIT 12056]
          Length = 1010

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 71/203 (34%), Gaps = 45/203 (22%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
             +YEK   +++ +N ++A   F +    +P + V+RK+      + Y    Y  A    
Sbjct: 629 NALYEKGRSYVQSRNSNQAIATFRELLNKYPESPVSRKAATEIGLLYYQNDDYNHAIEAY 688

Query: 118 EEYITQYPESKNVDYVY------Y---------------LVGMSYAQMIRDVPYDQRATK 156
           +  I++YP S+            Y               + G+   +          A +
Sbjct: 689 KYVISKYPGSEEARLAMRDLKSIYVEANRVDEFAALAAQMPGVIRFEPSEQDSLTYIAAE 748

Query: 157 L---------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
                       +   R ++ Y N  +   A +Y+++       KE         + +  
Sbjct: 749 KVYMKGEISPARESFIRYLQSYPNGAFSLNAHYYLSLI-----GKE---------QKDET 794

Query: 208 AAIPRFQLVLANYSDAEHAEEAM 230
           A +     +L  Y D+ ++EEA+
Sbjct: 795 AVLEHTSKLLE-YPDSPYSEEAL 816



 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 73/218 (33%), Gaps = 26/218 (11%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQA 113
           Y    Y  A +   +++++ A + F +  +          +              ++ +A
Sbjct: 516 YALAYYNLAYIAFHKKDYATAQDRFLKFIQLQKNGNATVLADAYNRIGDCYMHVRRFDEA 575

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
                        +   DY YY + +        V   Q+     +  ++++  +Y NSP
Sbjct: 576 RQYYTRAENL--GTPAGDYSYYQLAL--------VSGLQKNYDGKITLLNQLASKYPNSP 625

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
           Y            N L  K    GR Y++      AI  F+ +L  Y ++  + +A   +
Sbjct: 626 YA----------VNALYEK----GRSYVQSRNSNQAIATFRELLNKYPESPVSRKAATEI 671

Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
              Y      + A E    +  +YP    AR     +K
Sbjct: 672 GLLYYQNDDYNHAIEAYKYVISKYPGSEEARLAMRDLK 709



 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 44/126 (34%), Gaps = 8/126 (6%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            Y+ A++   ++N+       NQ +  +P +  A  +L         +    QA +   E
Sbjct: 594 YYQLALVSGLQKNYDGKITLLNQLASKYPNSPYAVNALYEKGRSYVQSRNSNQAIATFRE 653

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            + +YPES         +G+ Y Q               ++    ++ +Y  S   + A 
Sbjct: 654 LLNKYPESPVSRKAATEIGLLYYQNDD--------YNHAIEAYKYVISKYPGSEEARLAM 705

Query: 180 FYVTVG 185
             +   
Sbjct: 706 RDLKSI 711



 Score = 42.8 bits (100), Expect = 0.055,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 74/236 (31%), Gaps = 40/236 (16%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAAS 115
           +++          F +A  YFNQ            ++   + +      Y   + Q+AA 
Sbjct: 443 LFQLGTQSFANTQFEQAINYFNQSIAL---GQYNLQTKADALYWRGESYYRLNRMQEAAR 499

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQM--IRDVPYDQRATKLMLQYMSRIVERYTNSP 173
              EY++  P+ KN +    +  ++Y  +  I     D    +       ++ +   N+ 
Sbjct: 500 NFNEYLSLAPQ-KNTE----MYALAYYNLAYIAFHKKDYATAQDRFLKFIQLQKN-GNAT 553

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKR-----------------------GEYVAAI 210
            +  A   +      +     +  R Y  R                         Y   I
Sbjct: 554 VLADAYNRIGDCYMHVRR--FDEARQYYTRAENLGTPAGDYSYYQLALVSGLQKNYDGKI 611

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
                + + Y ++ +A  A+     +YV     ++A      +  +YP+   +R  
Sbjct: 612 TLLNQLASKYPNSPYAVNALYEKGRSYVQSRNSNQAIATFRELLNKYPESPVSRKA 667



 Score = 42.0 bits (98), Expect = 0.091,   Method: Composition-based stats.
 Identities = 39/314 (12%), Positives = 83/314 (26%), Gaps = 82/314 (26%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA--- 76
           +K    ++ ++    L+   + S +         +   + +YE+     +++ F+ A   
Sbjct: 3   HKIYRIVYTALCCAPLLATAQTSEK---------ITSPQRLYEEGRNLFQQKAFAAAMSP 53

Query: 77  ----------------------------------------YEYFNQCSRDFPFAGVARKS 96
                                                    E        +P    A + 
Sbjct: 54  LHTFVKQLNAEGNPLFAAGDKEEAEYMLVCAEYELRSPNSIELLRSYLDVYPDTPHANRI 113

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
             + A   +  GKY +A ++          ++  D + Y +   + +            K
Sbjct: 114 YALIASAYFFEGKYDEALAMFNSARLDLLSNEERDDMTYRLATCFLKT--------GNVK 165

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE--------------------VEI 196
               +   +  R T S Y     +Y++  R      E                      I
Sbjct: 166 EAAIWFETL--RSTGSKYAADCTYYLSYIRYSQQRYENALSGFLSLQDNTKYKTLVPYYI 223

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
              YL +  Y  A    Q  L+ Y + ++  E       A        EA E  +   + 
Sbjct: 224 AEIYLIKKNYDKAEIVAQNYLSAYPNQKYTGEMYRIQGTADYHSGKYHEAAEAFNQYLKD 283

Query: 257 YPQGYWARYVETLV 270
             +    R    ++
Sbjct: 284 NVESTRRRDALYML 297



 Score = 39.3 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 63/193 (32%), Gaps = 50/193 (25%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL--LMSAF 102
           + Y +S    +   E+    +L+ +  +++ A E +      +P +  AR ++  L S +
Sbjct: 656 NKYPESPVSRKAATEI---GLLYYQNDDYNHAIEAYKYVISKYPGSEEARLAMRDLKSIY 712

Query: 103 VQ------------------------------------YSAGKYQQAASLGEEYITQYPE 126
           V+                                    Y  G+   A      Y+  YP 
Sbjct: 713 VEANRVDEFAALAAQMPGVIRFEPSEQDSLTYIAAEKVYMKGEISPARESFIRYLQSYPN 772

Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
                  +Y     Y  +I     D+ A    L++ S+++E Y +SPY + A        
Sbjct: 773 GAFSLNAHY-----YLSLIGKEQKDETAV---LEHTSKLLE-YPDSPYSEEALLMRGEIL 823

Query: 187 NQLAAKEVEIGRY 199
                 E  +  Y
Sbjct: 824 FNHKEYERALADY 836



 Score = 38.9 bits (90), Expect = 0.72,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 63/202 (31%), Gaps = 27/202 (13%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
               LD +++       Y  A  FLK  N  +A  +F         +  A       +++
Sbjct: 135 NSARLDLLSNEERDDMTYRLATCFLKTGNVKEAAIWFETLRST--GSKYAADCTYYLSYI 192

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           +YS  +Y+ A S    +++    +K    V Y +   Y          ++          
Sbjct: 193 RYSQQRYENALSG---FLSLQDNTKYKTLVPYYIAEIY--------LIKKNYDKAEIVAQ 241

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
             +  Y N  Y     + +    +                G+Y  A   F   L +  ++
Sbjct: 242 NYLSAYPNQKYTGEM-YRIQGTAD-------------YHSGKYHEAAEAFNQYLKDNVES 287

Query: 224 EHAEEAMARLVEAYVALALMDE 245
               +A+  L  +Y    +  +
Sbjct: 288 TRRRDALYMLGMSYYQTGVYSQ 309



 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 77/215 (35%), Gaps = 25/215 (11%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A ++L ++N+ KA          +P      +   +     Y +GKY +AA    +Y
Sbjct: 221 YYIAEIYLIKKNYDKAEIVAQNYLSAYPNQKYTGEMYRIQGTADYHSGKYHEAAEAFNQY 280

Query: 121 ITQYPESKNVDYVYYLVGMSYAQM---------IRDVPYDQRA-----------TKLMLQ 160
           +    ES       Y++GMSY Q          + +V  D+ A             L L 
Sbjct: 281 LKDNVESTRRRDALYMLGMSYYQTGVYSQVPVILGEVTTDKDALTQNAYLHMGLAYLQLA 340

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
             ++    +  +     A   +       A+    +  +      +  ++  F+  L  +
Sbjct: 341 DRNKARMAFEQAA-ASDADQKIKE----QASYNYALCIHETSYSAFGESVTVFEHFLNEF 395

Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
            ++ +A++    LVE Y+     D A + +  I  
Sbjct: 396 PNSVYADKVSNYLVEVYMNTRSYDAALKSIERIAR 430


>gi|293977887|ref|YP_003543317.1| hypothetical protein DMIN_01700 [Candidatus Sulcia muelleri DMIN]
 gi|292667818|gb|ADE35453.1| hypothetical protein DMIN_01700 [Candidatus Sulcia muelleri DMIN]
          Length = 324

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 63/172 (36%), Gaps = 16/172 (9%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL-----MSAFVQYSAGKYQQA 113
           EV  +A    K + + KA   FN+           +K L        A   +   KY  A
Sbjct: 55  EVVSEAEYLFKNKYYKKALINFNKIINK----SFLKKELYYNIIKKIALCYFYLKKYDLA 110

Query: 114 ASLGEEYITQYPESKNVDYV---YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
                 ++    ++ N D      + +GM Y     D  + Q+     ++    + + Y 
Sbjct: 111 I----NFLKILLKTDNSDSAEENIFNLGMCYYLQSNDYFFFQKNRMKYIKIFLFLRKNYP 166

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
           NS Y+      +      L  K+  IG YY    +Y ++   F+ ++ +Y D
Sbjct: 167 NSRYLPRIDKILYNAFITLKKKKESIGMYYFNTKKYNSSRIVFKQIINDYQD 218


>gi|241764617|ref|ZP_04762632.1| tol-pal system protein YbgF [Acidovorax delafieldii 2AN]
 gi|241365938|gb|EER60568.1| tol-pal system protein YbgF [Acidovorax delafieldii 2AN]
          Length = 256

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 48/126 (38%), Gaps = 8/126 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           +E A+   +   F++A   F    R +P +G    +       QY+A +Y++A    +  
Sbjct: 139 FEAALAIFRSGKFAEANAAFAGFVRQYPRSGYVPSARFWLGNAQYAAREYKEAIGNFKLL 198

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +++ P             +S    I +   + + T+   + +  ++  Y  S     A+ 
Sbjct: 199 LSEAPNHARAPEA----ALS----IANCQIELKETRTARKTLEDLLRAYPQSEAAVAAKE 250

Query: 181 YVTVGR 186
            +   +
Sbjct: 251 RLFRLK 256



 Score = 45.1 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 47/143 (32%), Gaps = 22/143 (15%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           A K    +A   + +GK+ +A +    ++ QYP S  V    + +G +            
Sbjct: 134 AEKRDFEAALAIFRSGKFAEANAAFAGFVRQYPRSGYVPSARFWLGNAQYAA-------- 185

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           R  K  +     ++    N      A   +   + +L  KE    R              
Sbjct: 186 REYKEAIGNFKLLLSEAPNHARAPEAALSIANCQIEL--KETRTAR------------KT 231

Query: 213 FQLVLANYSDAEHAEEAMARLVE 235
            + +L  Y  +E A  A  RL  
Sbjct: 232 LEDLLRAYPQSEAAVAAKERLFR 254



 Score = 42.0 bits (98), Expect = 0.095,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 39/105 (37%), Gaps = 14/105 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                 +  V +Y  S YV  ARF++   +           R      EY  AI  F+L+
Sbjct: 153 EANAAFAGFVRQYPRSGYVPSARFWLGNAQ--------YAAR------EYKEAIGNFKLL 198

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           L+   +   A EA   +    + L     AR+ +  +   YPQ  
Sbjct: 199 LSEAPNHARAPEAALSIANCQIELKETRTARKTLEDLLRAYPQSE 243


>gi|23502551|ref|NP_698678.1| hypothetical protein BR1693 [Brucella suis 1330]
 gi|62290565|ref|YP_222358.1| hypothetical protein BruAb1_1678 [Brucella abortus bv. 1 str.
           9-941]
 gi|82700481|ref|YP_415055.1| TPR repeat-containing molluscan rhodopsin [Brucella melitensis
           biovar Abortus 2308]
 gi|161619623|ref|YP_001593510.1| tol-pal system protein YbgF [Brucella canis ATCC 23365]
 gi|225628262|ref|ZP_03786296.1| tol-pal system protein YbgF [Brucella ceti str. Cudo]
 gi|225853149|ref|YP_002733382.1| Tol-Pal system protein YbgF [Brucella melitensis ATCC 23457]
 gi|256370102|ref|YP_003107613.1| hypothetical protein BMI_I1713 [Brucella microti CCM 4915]
 gi|260568780|ref|ZP_05839248.1| TPR repeat-containing protein [Brucella suis bv. 4 str. 40]
 gi|260755393|ref|ZP_05867741.1| tol-Pal system YbgF [Brucella abortus bv. 6 str. 870]
 gi|260758614|ref|ZP_05870962.1| tol-Pal system YbgF [Brucella abortus bv. 4 str. 292]
 gi|260762447|ref|ZP_05874784.1| tol-Pal system YbgF [Brucella abortus bv. 2 str. 86/8/59]
 gi|260884409|ref|ZP_05896023.1| tol-Pal system YbgF [Brucella abortus bv. 9 str. C68]
 gi|261222818|ref|ZP_05937099.1| tol-Pal system YbgF [Brucella ceti B1/94]
 gi|261315939|ref|ZP_05955136.1| tol-Pal system YbgF [Brucella pinnipedialis M163/99/10]
 gi|261316199|ref|ZP_05955396.1| tol-Pal system YbgF [Brucella pinnipedialis B2/94]
 gi|261325735|ref|ZP_05964932.1| tol-Pal system YbgF [Brucella neotomae 5K33]
 gi|261750849|ref|ZP_05994558.1| tol-Pal system YbgF [Brucella suis bv. 5 str. 513]
 gi|261757347|ref|ZP_06001056.1| TPR repeat-containing protein [Brucella sp. F5/99]
 gi|265987262|ref|ZP_06099819.1| tol-Pal system YbgF [Brucella pinnipedialis M292/94/1]
 gi|265995566|ref|ZP_06108123.1| tol-Pal system YbgF [Brucella melitensis bv. 3 str. Ether]
 gi|265998777|ref|ZP_06111334.1| tol-Pal system YbgF [Brucella ceti M490/95/1]
 gi|265999342|ref|ZP_05465891.2| TPR repeat-containing protein [Brucella melitensis bv. 2 str. 63/9]
 gi|297248965|ref|ZP_06932673.1| periplasmic protein [Brucella abortus bv. 5 str. B3196]
 gi|23348551|gb|AAN30593.1| conserved domain protein [Brucella suis 1330]
 gi|62196697|gb|AAX74997.1| conserved domain protein [Brucella abortus bv. 1 str. 9-941]
 gi|82616582|emb|CAJ11661.1| TPR repeat:Molluscan rhodopsin C-terminal tail [Brucella melitensis
           biovar Abortus 2308]
 gi|161336434|gb|ABX62739.1| tol-pal system protein YbgF [Brucella canis ATCC 23365]
 gi|225616108|gb|EEH13156.1| tol-pal system protein YbgF [Brucella ceti str. Cudo]
 gi|225641514|gb|ACO01428.1| tol-pal system protein YbgF [Brucella melitensis ATCC 23457]
 gi|256000265|gb|ACU48664.1| hypothetical protein BMI_I1713 [Brucella microti CCM 4915]
 gi|260154164|gb|EEW89246.1| TPR repeat-containing protein [Brucella suis bv. 4 str. 40]
 gi|260668932|gb|EEX55872.1| tol-Pal system YbgF [Brucella abortus bv. 4 str. 292]
 gi|260672873|gb|EEX59694.1| tol-Pal system YbgF [Brucella abortus bv. 2 str. 86/8/59]
 gi|260675501|gb|EEX62322.1| tol-Pal system YbgF [Brucella abortus bv. 6 str. 870]
 gi|260873937|gb|EEX81006.1| tol-Pal system YbgF [Brucella abortus bv. 9 str. C68]
 gi|260921402|gb|EEX88055.1| tol-Pal system YbgF [Brucella ceti B1/94]
 gi|261295422|gb|EEX98918.1| tol-Pal system YbgF [Brucella pinnipedialis B2/94]
 gi|261301715|gb|EEY05212.1| tol-Pal system YbgF [Brucella neotomae 5K33]
 gi|261304965|gb|EEY08462.1| tol-Pal system YbgF [Brucella pinnipedialis M163/99/10]
 gi|261737331|gb|EEY25327.1| TPR repeat-containing protein [Brucella sp. F5/99]
 gi|261740602|gb|EEY28528.1| tol-Pal system YbgF [Brucella suis bv. 5 str. 513]
 gi|262553466|gb|EEZ09235.1| tol-Pal system YbgF [Brucella ceti M490/95/1]
 gi|262766850|gb|EEZ12468.1| tol-Pal system YbgF [Brucella melitensis bv. 3 str. Ether]
 gi|263093358|gb|EEZ17427.1| TPR repeat-containing protein [Brucella melitensis bv. 2 str. 63/9]
 gi|264659459|gb|EEZ29720.1| tol-Pal system YbgF [Brucella pinnipedialis M292/94/1]
 gi|297174098|gb|EFH33455.1| periplasmic protein [Brucella abortus bv. 5 str. B3196]
 gi|326409707|gb|ADZ66772.1| Tol-Pal system protein YbgF [Brucella melitensis M28]
          Length = 488

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 50/127 (39%), Gaps = 8/127 (6%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           +  + S+        +Y+ A  +L   ++  A   F +  + +P   +  ++        
Sbjct: 352 NDAVASLPTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESL 411

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y  G+Y +AA+L  +    YP+SK      + +GM+  +M            +     ++
Sbjct: 412 YGQGRYPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNH--------DVACATFAQ 463

Query: 165 IVERYTN 171
           I +RY  
Sbjct: 464 IPQRYPK 470



 Score = 43.6 bits (102), Expect = 0.030,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 8/104 (7%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           SL  +A+    +G Y+ A +   E++ +YP         + +G S     R         
Sbjct: 366 SLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYP------- 418

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
                        Y +S       F + +   ++   +V    +
Sbjct: 419 -EAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATF 461



 Score = 39.3 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 14/107 (13%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         V+RY   P    ARF++                    +G Y  A   
Sbjct: 378 GDYKAAEAGFREHVKRYPADPMTAEARFWLGESL--------------YGQGRYPEAATL 423

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           F     +Y D++ A E M +L  A   +   D A    + I +RYP+
Sbjct: 424 FIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYPK 470



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 23/68 (33%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +    YL  G+Y AA   F+  +  Y       EA   L E+        EA  +    
Sbjct: 368 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 427

Query: 254 QERYPQGY 261
           Q  YP   
Sbjct: 428 QRDYPDSK 435


>gi|306841412|ref|ZP_07474114.1| tol-pal system protein YbgF [Brucella sp. BO2]
 gi|306288518|gb|EFM59870.1| tol-pal system protein YbgF [Brucella sp. BO2]
          Length = 484

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 50/127 (39%), Gaps = 8/127 (6%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           +  + S+        +Y+ A  +L   ++  A   F +  + +P   +  ++        
Sbjct: 348 NDAVASLPTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESL 407

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y  G+Y +AA+L  +    YP+SK      + +GM+  +M            +     ++
Sbjct: 408 YGQGRYPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNH--------DVACATFAQ 459

Query: 165 IVERYTN 171
           I +RY  
Sbjct: 460 IPQRYPK 466



 Score = 43.6 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 8/104 (7%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           SL  +A+    +G Y+ A +   E++ +YP         + +G S     R         
Sbjct: 362 SLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYP------- 414

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
                        Y +S       F + +   ++   +V    +
Sbjct: 415 -EAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATF 457



 Score = 39.3 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 14/107 (13%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         V+RY   P    ARF++                    +G Y  A   
Sbjct: 374 GDYKAAEAGFREHVKRYPADPMTAEARFWLGESL--------------YGQGRYPEAATL 419

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           F     +Y D++ A E M +L  A   +   D A    + I +RYP+
Sbjct: 420 FIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYPK 466



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 23/68 (33%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +    YL  G+Y AA   F+  +  Y       EA   L E+        EA  +    
Sbjct: 364 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 423

Query: 254 QERYPQGY 261
           Q  YP   
Sbjct: 424 QRDYPDSK 431


>gi|261754102|ref|ZP_05997811.1| tol-Pal system YbgF [Brucella suis bv. 3 str. 686]
 gi|261743855|gb|EEY31781.1| tol-Pal system YbgF [Brucella suis bv. 3 str. 686]
          Length = 488

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 50/127 (39%), Gaps = 8/127 (6%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           +  + S+        +Y+ A  +L   ++  A   F +  + +P   +  ++        
Sbjct: 352 NDAVASLPTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESL 411

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y  G+Y +AA+L  +    YP+SK      + +GM+  +M            +     ++
Sbjct: 412 YGQGRYPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNH--------DVACATFAQ 463

Query: 165 IVERYTN 171
           I +RY  
Sbjct: 464 IPQRYPK 470



 Score = 43.6 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 8/104 (7%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           SL  +A+    +G Y+ A +   E++ +YP         + +G S     R         
Sbjct: 366 SLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYP------- 418

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
                        Y +S       F + +   ++   +V    +
Sbjct: 419 -EAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATF 461



 Score = 39.3 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 14/107 (13%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         V+RY   P    ARF++                    +G Y  A   
Sbjct: 378 GDYKAAEAGFREHVKRYPADPMTAEARFWLGESL--------------YGQGRYPEAATL 423

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           F     +Y D++ A E M +L  A   +   D A    + I +RYP+
Sbjct: 424 FIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYPK 470



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 23/68 (33%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +    YL  G+Y AA   F+  +  Y       EA   L E+        EA  +    
Sbjct: 368 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 427

Query: 254 QERYPQGY 261
           Q  YP   
Sbjct: 428 QRDYPDSK 435


>gi|254703472|ref|ZP_05165300.1| TPR repeat-containing protein [Brucella suis bv. 3 str. 686]
          Length = 484

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 50/127 (39%), Gaps = 8/127 (6%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           +  + S+        +Y+ A  +L   ++  A   F +  + +P   +  ++        
Sbjct: 348 NDAVASLPTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESL 407

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y  G+Y +AA+L  +    YP+SK      + +GM+  +M            +     ++
Sbjct: 408 YGQGRYPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNH--------DVACATFAQ 459

Query: 165 IVERYTN 171
           I +RY  
Sbjct: 460 IPQRYPK 466



 Score = 43.6 bits (102), Expect = 0.030,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 8/104 (7%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           SL  +A+    +G Y+ A +   E++ +YP         + +G S     R         
Sbjct: 362 SLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYP------- 414

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
                        Y +S       F + +   ++   +V    +
Sbjct: 415 -EAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATF 457



 Score = 39.3 bits (91), Expect = 0.62,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 14/107 (13%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         V+RY   P    ARF++                    +G Y  A   
Sbjct: 374 GDYKAAEAGFREHVKRYPADPMTAEARFWLGESL--------------YGQGRYPEAATL 419

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           F     +Y D++ A E M +L  A   +   D A    + I +RYP+
Sbjct: 420 FIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYPK 466



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 23/68 (33%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +    YL  G+Y AA   F+  +  Y       EA   L E+        EA  +    
Sbjct: 364 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 423

Query: 254 QERYPQGY 261
           Q  YP   
Sbjct: 424 QRDYPDSK 431


>gi|253700248|ref|YP_003021437.1| lytic transglycosylase catalytic [Geobacter sp. M21]
 gi|251775098|gb|ACT17679.1| Lytic transglycosylase catalytic [Geobacter sp. M21]
          Length = 709

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 80/251 (31%), Gaps = 40/251 (15%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
            F  T   + AV F               S    +   E    A   ++ +++  A E  
Sbjct: 1   MFNRTAIAAAAVLFCTA---------LPASAVTFKPADEALASAASRMQAKDYRTAKEAA 51

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
           ++ +     +        M         ++++AA         YP     DY  Y  G+S
Sbjct: 52  SKVNDKGVRS-------FMVGMAAARLEQWEEAAGQLATAADAYPI--LADYALYYQGLS 102

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
             ++ R   +DQ      L  + R++++Y  S  V+ A   + +  + LAA         
Sbjct: 103 LTKLER---HDQ-----ALTPLYRLLKQYPESRLVRAA---LILYSDTLAA--------- 142

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
              G Y  A   +   +  Y     +  A+         L     A + +  I   YP  
Sbjct: 143 --AGHYNEAQQSYSTFVERYPLGNDSISALYGSALCKEKLGDPIAAAKALRGIYLNYPAS 200

Query: 261 YWARYVETLVK 271
            ++      ++
Sbjct: 201 PFSDKSARDLQ 211



 Score = 41.6 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 22/165 (13%), Positives = 56/165 (33%), Gaps = 8/165 (4%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           K   +    +A   L  WE  + +         +     +Y + +   K +   +A    
Sbjct: 57  KGVRSFMVGMAAARLEQWEEAAGQLATAADAYPILADYALYYQGLSLTKLERHDQALTPL 116

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
            +  + +P + + R +L++ +    +AG Y +A      ++ +YP   +     Y   + 
Sbjct: 117 YRLLKQYPESRLVRAALILYSDTLAAAGHYNEAQQSYSTFVERYPLGNDSISALYGSALC 176

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
             ++   +           + +  I   Y  SP+   +   +   
Sbjct: 177 KEKLGDPI--------AAAKALRGIYLNYPASPFSDKSARDLQRL 213


>gi|189024785|ref|YP_001935553.1| TPR repeat-containing protein [Brucella abortus S19]
 gi|237816071|ref|ZP_04595067.1| tol-pal system protein YbgF [Brucella abortus str. 2308 A]
 gi|254689862|ref|ZP_05153116.1| TPR repeat-containing protein [Brucella abortus bv. 6 str. 870]
 gi|254698013|ref|ZP_05159841.1| TPR repeat-containing protein [Brucella abortus bv. 2 str. 86/8/59]
 gi|254700355|ref|ZP_05162183.1| TPR repeat-containing protein [Brucella suis bv. 5 str. 513]
 gi|254708439|ref|ZP_05170267.1| TPR repeat-containing protein [Brucella pinnipedialis M163/99/10]
 gi|254708708|ref|ZP_05170519.1| TPR repeat-containing protein [Brucella pinnipedialis B2/94]
 gi|254730897|ref|ZP_05189475.1| TPR repeat-containing protein [Brucella abortus bv. 4 str. 292]
 gi|256030234|ref|ZP_05443848.1| TPR repeat-containing protein [Brucella pinnipedialis M292/94/1]
 gi|256061731|ref|ZP_05451868.1| TPR repeat-containing protein [Brucella neotomae 5K33]
 gi|256114262|ref|ZP_05455007.1| TPR repeat-containing protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|256160409|ref|ZP_05458098.1| TPR repeat-containing protein [Brucella ceti M490/95/1]
 gi|256255615|ref|ZP_05461151.1| TPR repeat-containing protein [Brucella ceti B1/94]
 gi|256258116|ref|ZP_05463652.1| TPR repeat-containing protein [Brucella abortus bv. 9 str. C68]
 gi|260167909|ref|ZP_05754720.1| TPR repeat-containing protein [Brucella sp. F5/99]
 gi|294850946|ref|ZP_06791622.1| TPR repeat containing exported protein [Brucella sp. NVSL 07-0026]
 gi|189020357|gb|ACD73079.1| TPR repeat-containing protein [Brucella abortus S19]
 gi|237788734|gb|EEP62946.1| tol-pal system protein YbgF [Brucella abortus str. 2308 A]
 gi|294821589|gb|EFG38585.1| TPR repeat containing exported protein [Brucella sp. NVSL 07-0026]
 gi|326539414|gb|ADZ87629.1| tol-pal system protein YbgF [Brucella melitensis M5-90]
          Length = 484

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 50/127 (39%), Gaps = 8/127 (6%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           +  + S+        +Y+ A  +L   ++  A   F +  + +P   +  ++        
Sbjct: 348 NDAVASLPTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESL 407

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y  G+Y +AA+L  +    YP+SK      + +GM+  +M            +     ++
Sbjct: 408 YGQGRYPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNH--------DVACATFAQ 459

Query: 165 IVERYTN 171
           I +RY  
Sbjct: 460 IPQRYPK 466



 Score = 43.6 bits (102), Expect = 0.030,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 8/104 (7%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           SL  +A+    +G Y+ A +   E++ +YP         + +G S     R         
Sbjct: 362 SLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYP------- 414

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
                        Y +S       F + +   ++   +V    +
Sbjct: 415 -EAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATF 457



 Score = 39.3 bits (91), Expect = 0.62,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 14/107 (13%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         V+RY   P    ARF++                    +G Y  A   
Sbjct: 374 GDYKAAEAGFREHVKRYPADPMTAEARFWLGESL--------------YGQGRYPEAATL 419

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           F     +Y D++ A E M +L  A   +   D A    + I +RYP+
Sbjct: 420 FIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYPK 466



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 23/68 (33%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +    YL  G+Y AA   F+  +  Y       EA   L E+        EA  +    
Sbjct: 364 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 423

Query: 254 QERYPQGY 261
           Q  YP   
Sbjct: 424 QRDYPDSK 431


>gi|114765729|ref|ZP_01444827.1| hypothetical protein 1100011001327_R2601_12438 [Pelagibaca
           bermudensis HTCC2601]
 gi|114541946|gb|EAU44981.1| hypothetical protein R2601_12438 [Roseovarius sp. HTCC2601]
          Length = 276

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 43/129 (33%), Gaps = 14/129 (10%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           ++  + +A   L   +F  A + F      FP + +   +LL         G      + 
Sbjct: 153 EQNDFRRAQEALASGDFQGAADQFATFRETFPGSPLEPDALLAEGKALDQTGD---TRTA 209

Query: 117 GEEYIT---QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
              ++     YPES       + +G +   +        ++       ++ +  RY  +P
Sbjct: 210 ARRFLDAYANYPESDAAPEALWRLGTALGAL--------QSVNEACVTLAEVGARYPGTP 261

Query: 174 YVKGARFYV 182
            V  A   +
Sbjct: 262 AVAEAEAEM 270



 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 45/121 (37%), Gaps = 19/121 (15%)

Query: 146 RDVPYDQRA-----TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
            D    Q A      +      +   E +  SP    A          LA      G+  
Sbjct: 155 NDFRRAQEALASGDFQGAADQFATFRETFPGSPLEPDA---------LLAE-----GKAL 200

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            + G+   A  RF    ANY +++ A EA+ RL  A  AL  ++EA   ++ +  RYP  
Sbjct: 201 DQTGDTRTAARRFLDAYANYPESDAAPEALWRLGTALGALQSVNEACVTLAEVGARYPGT 260

Query: 261 Y 261
            
Sbjct: 261 P 261


>gi|302187149|ref|ZP_07263822.1| tol-pal system protein YbgF [Pseudomonas syringae pv. syringae 642]
          Length = 208

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 8/136 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D   ++  YE A   +K ++F KA + F    R +P +  A  +      V  + G 
Sbjct: 81  EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 140

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            Q A     +   QYP+   V    Y +         DV      T  +   + ++V +Y
Sbjct: 141 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 192

Query: 170 TNSPYVKGARFYVTVG 185
             +   + A+  +   
Sbjct: 193 PGTSAAQLAQRDLQRL 208



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
             +I+   +D        Q  +  + +Y NS Y   A++++      LA  +++      
Sbjct: 96  FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 142

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
                  A   F  V   Y       +++ +L +    L   D+ + ++  +  +YP   
Sbjct: 143 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 196

Query: 262 WARYVETLVK 271
            A+  +  ++
Sbjct: 197 AAQLAQRDLQ 206


>gi|261219283|ref|ZP_05933564.1| tol-Pal system YbgF [Brucella ceti M13/05/1]
 gi|261322344|ref|ZP_05961541.1| tol-Pal system YbgF [Brucella ceti M644/93/1]
 gi|260924372|gb|EEX90940.1| tol-Pal system YbgF [Brucella ceti M13/05/1]
 gi|261295034|gb|EEX98530.1| tol-Pal system YbgF [Brucella ceti M644/93/1]
          Length = 488

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 50/127 (39%), Gaps = 8/127 (6%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           +  + S+        +Y+ A  +L   ++  A   F +  + +P   +  ++        
Sbjct: 352 NDAVASLPTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESL 411

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y  G+Y +AA+L  +    YP+SK      + +GM+  +M            +     ++
Sbjct: 412 YGQGRYPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNH--------DVACATFAQ 463

Query: 165 IVERYTN 171
           I +RY  
Sbjct: 464 IPQRYPK 470



 Score = 43.6 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 8/104 (7%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           SL  +A+    +G Y+ A +   E++ +YP         + +G S     R         
Sbjct: 366 SLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYP------- 418

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
                        Y +S       F + +   ++   +V    +
Sbjct: 419 -EAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATF 461



 Score = 39.3 bits (91), Expect = 0.63,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 14/107 (13%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         V+RY   P    ARF++                    +G Y  A   
Sbjct: 378 GDYKAAEAGFREHVKRYPADPMTAEARFWLGESL--------------YGQGRYPEAATL 423

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           F     +Y D++ A E M +L  A   +   D A    + I +RYP+
Sbjct: 424 FIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYPK 470



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 23/68 (33%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +    YL  G+Y AA   F+  +  Y       EA   L E+        EA  +    
Sbjct: 368 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 427

Query: 254 QERYPQGY 261
           Q  YP   
Sbjct: 428 QRDYPDSK 435


>gi|330868620|gb|EGH03329.1| tol-pal system protein YbgF [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 262

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 48/131 (36%), Gaps = 8/131 (6%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D   ++  YE A   +K ++F KA + F    R +P +  A  +      V  + G 
Sbjct: 135 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 194

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            Q A     +   QYP+   V    Y +         DV      T  +   + ++V +Y
Sbjct: 195 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 246

Query: 170 TNSPYVKGARF 180
             +   + A+ 
Sbjct: 247 PGTSAAQLAQR 257



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
             +I+   +D        Q  +  + +Y NS Y   A++++      LA  +++      
Sbjct: 150 FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 196

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
                  A   F  V   Y       +++ +L +    L   D+ + ++  +  +YP   
Sbjct: 197 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 250

Query: 262 WARYVETLVK 271
            A+  +  ++
Sbjct: 251 AAQLAQRDLQ 260


>gi|213969193|ref|ZP_03397332.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
 gi|213926191|gb|EEB59747.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
          Length = 203

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 8/136 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D   ++  YE A   +K ++F KA + F    R +P +  A  +      V  + G 
Sbjct: 76  EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 135

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            Q A     +   QYP+   V    Y +         DV      T  +   + ++V +Y
Sbjct: 136 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 187

Query: 170 TNSPYVKGARFYVTVG 185
             +   + A+  +   
Sbjct: 188 PGTSAAQLAQRDLQRL 203



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
             +I+   +D        Q  +  + +Y NS Y   A++++      LA  +++      
Sbjct: 91  FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 137

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
                  A   F  V   Y       +++ +L +    L   D+ + ++  +  +YP   
Sbjct: 138 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 191

Query: 262 WARYVETLVK 271
            A+  +  ++
Sbjct: 192 AAQLAQRDLQ 201


>gi|260547190|ref|ZP_05822928.1| TPR repeat-containing protein [Brucella abortus NCTC 8038]
 gi|260095555|gb|EEW79433.1| TPR repeat-containing protein [Brucella abortus NCTC 8038]
          Length = 321

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 50/127 (39%), Gaps = 8/127 (6%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           +  + S+        +Y+ A  +L   ++  A   F +  + +P   +  ++        
Sbjct: 185 NDAVASLPTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESL 244

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y  G+Y +AA+L  +    YP+SK      + +GM+  +M            +     ++
Sbjct: 245 YGQGRYPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNH--------DVACATFAQ 296

Query: 165 IVERYTN 171
           I +RY  
Sbjct: 297 IPQRYPK 303



 Score = 43.6 bits (102), Expect = 0.033,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 8/104 (7%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           SL  +A+    +G Y+ A +   E++ +YP         + +G S     R         
Sbjct: 199 SLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYP------- 251

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
                        Y +S       F + +   ++   +V    +
Sbjct: 252 -EAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATF 294



 Score = 38.9 bits (90), Expect = 0.68,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 14/107 (13%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         V+RY   P    ARF++                    +G Y  A   
Sbjct: 211 GDYKAAEAGFREHVKRYPADPMTAEARFWLGESL--------------YGQGRYPEAATL 256

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           F     +Y D++ A E M +L  A   +   D A    + I +RYP+
Sbjct: 257 FIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYPK 303



 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 23/68 (33%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +    YL  G+Y AA   F+  +  Y       EA   L E+        EA  +    
Sbjct: 201 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 260

Query: 254 QERYPQGY 261
           Q  YP   
Sbjct: 261 QRDYPDSK 268


>gi|254714555|ref|ZP_05176366.1| TPR repeat-containing protein [Brucella ceti M644/93/1]
 gi|254717452|ref|ZP_05179263.1| TPR repeat-containing protein [Brucella ceti M13/05/1]
          Length = 484

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 50/127 (39%), Gaps = 8/127 (6%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           +  + S+        +Y+ A  +L   ++  A   F +  + +P   +  ++        
Sbjct: 348 NDAVASLPTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESL 407

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y  G+Y +AA+L  +    YP+SK      + +GM+  +M            +     ++
Sbjct: 408 YGQGRYPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNH--------DVACATFAQ 459

Query: 165 IVERYTN 171
           I +RY  
Sbjct: 460 IPQRYPK 466



 Score = 43.6 bits (102), Expect = 0.033,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 8/104 (7%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           SL  +A+    +G Y+ A +   E++ +YP         + +G S     R         
Sbjct: 362 SLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYP------- 414

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
                        Y +S       F + +   ++   +V    +
Sbjct: 415 -EAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATF 457



 Score = 38.9 bits (90), Expect = 0.65,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 14/107 (13%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         V+RY   P    ARF++                    +G Y  A   
Sbjct: 374 GDYKAAEAGFREHVKRYPADPMTAEARFWLGESL--------------YGQGRYPEAATL 419

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           F     +Y D++ A E M +L  A   +   D A    + I +RYP+
Sbjct: 420 FIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYPK 466



 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 23/68 (33%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +    YL  G+Y AA   F+  +  Y       EA   L E+        EA  +    
Sbjct: 364 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 423

Query: 254 QERYPQGY 261
           Q  YP   
Sbjct: 424 QRDYPDSK 431


>gi|163845273|ref|YP_001622928.1| tol-pal system protein YbgF [Brucella suis ATCC 23445]
 gi|163675996|gb|ABY40106.1| tol-pal system protein YbgF [Brucella suis ATCC 23445]
          Length = 465

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 50/127 (39%), Gaps = 8/127 (6%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           +  + S+        +Y+ A  +L   ++  A   F +  + +P   +  ++        
Sbjct: 329 NDAVASLPTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESL 388

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y  G+Y +AA+L  +    YP+SK      + +GM+  +M            +     ++
Sbjct: 389 YGQGRYPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNH--------DVACATFAQ 440

Query: 165 IVERYTN 171
           I +RY  
Sbjct: 441 IPQRYPK 447



 Score = 43.2 bits (101), Expect = 0.035,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 8/104 (7%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           SL  +A+    +G Y+ A +   E++ +YP         + +G S     R         
Sbjct: 343 SLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYP------- 395

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
                        Y +S       F + +   ++   +V    +
Sbjct: 396 -EAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATF 438



 Score = 38.9 bits (90), Expect = 0.70,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 14/107 (13%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         V+RY   P    ARF++                    +G Y  A   
Sbjct: 355 GDYKAAEAGFREHVKRYPADPMTAEARFWLGESL--------------YGQGRYPEAATL 400

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           F     +Y D++ A E M +L  A   +   D A    + I +RYP+
Sbjct: 401 FIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYPK 447



 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 23/68 (33%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +    YL  G+Y AA   F+  +  Y       EA   L E+        EA  +    
Sbjct: 345 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 404

Query: 254 QERYPQGY 261
           Q  YP   
Sbjct: 405 QRDYPDSK 412


>gi|289626504|ref|ZP_06459458.1| tol-pal system protein YbgF [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
          Length = 248

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 48/131 (36%), Gaps = 8/131 (6%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D   ++  YE A   +K ++F KA + F    R +P +  A  +      V  + G 
Sbjct: 121 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 180

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            Q A     +   QYP+   V    Y +         DV      T  +   + ++V +Y
Sbjct: 181 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 232

Query: 170 TNSPYVKGARF 180
             +   + A+ 
Sbjct: 233 PGTSAAQLAQR 243



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
             +I+   +D        Q  +  + +Y NS Y   A++++      LA  +++      
Sbjct: 136 FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 182

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
                  A   F  V   Y       +++ +L +    L   D+ + ++  +  +YP   
Sbjct: 183 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 236

Query: 262 WARYVETLVK 271
            A+  +  ++
Sbjct: 237 AAQLAQRDLQ 246


>gi|239907804|ref|YP_002954545.1| hypothetical protein DMR_31680 [Desulfovibrio magneticus RS-1]
 gi|239797670|dbj|BAH76659.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 978

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 50/165 (30%), Gaps = 27/165 (16%)

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
           AG Y +      E I   P S  V      +GM   +                 Y + + 
Sbjct: 387 AGHYDEIQKALNEAINVNPNSYRVPETLLQLGMLNLR--------VGNIPEAKGYFNVLT 438

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
            +Y        A   +              G YY  RGEY  A   ++ V+  + +++  
Sbjct: 439 RKYP-----TDASVPMVN---------FAWGEYYFDRGEYKKAEEEYKNVVEKFPESKFV 484

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
            E    + +  V L    EA ++       Y    W RY     +
Sbjct: 485 REGAMGMAKTLVRLGRYKEAAQIA-----DYIDKRWPRYYTEFPQ 524



 Score = 46.3 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/236 (13%), Positives = 78/236 (33%), Gaps = 51/236 (21%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           A   ++   + +A +  +   + +P  +     + L ++  + Y  G +++A      + 
Sbjct: 492 AKTLVRLGRYKEAAQIADYIDKRWPRYYTEF-PQILRITGDIAYKNGDFKKARDCYMLFY 550

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              P++K+ D V   +G  YA++              + + +  ++ Y +S     A+  
Sbjct: 551 NMEPDAKDADLVLAKLGDIYARLGNKPG--------AVDFYNLAIKDYPDSEGGLVAKMR 602

Query: 182 VTV-------------------------------GRNQ-------LAAKEVEIGRYYLKR 203
           +                                  R+        LA   +++  + L +
Sbjct: 603 LAEQGVHDQPTISEMFPLFDKPQYGSPEEIYRSIIRDHPQSPLAPLAQ--LKLAMWLLHQ 660

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
             Y  ++      L  Y  +E A +A    + A+  +A    A +    +   Y +
Sbjct: 661 QNYPGSLKESAAYLERYPQSELAPKAEETAITAFERMAADMLAHKDYDRLVAAYKE 716



 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 73/216 (33%), Gaps = 32/216 (14%)

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
             ++ +  +  N+     P +    ++LL    +    G   +A         +YP   +
Sbjct: 387 AGHYDEIQKALNEAINVNPNSYRVPETLLQLGMLNLRVGNIPEAKGYFNVLTRKYPTDAS 446

Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
           V  V +  G  Y         D+   K   +    +VE++  S +V+     +     +L
Sbjct: 447 VPMVNFAWGEYYF--------DRGEYKKAEEEYKNVVEKFPESKFVREGAMGMAKTLVRL 498

Query: 190 AAKE--VEIG--------RYY--------------LKRGEYVAAIPRFQLVLANYSDAEH 225
              +   +I         RYY               K G++  A   + L      DA+ 
Sbjct: 499 GRYKEAAQIADYIDKRWPRYYTEFPQILRITGDIAYKNGDFKKARDCYMLFYNMEPDAKD 558

Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           A+  +A+L + Y  L     A +  +L  + YP   
Sbjct: 559 ADLVLAKLGDIYARLGNKPGAVDFYNLAIKDYPDSE 594



 Score = 44.0 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 58/190 (30%), Gaps = 31/190 (16%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
            TD       +     +     + KA E +      FP +   R+  +  A      G+Y
Sbjct: 442 PTDASVPMVNFAWGEYYFDRGEYKKAEEEYKNVVEKFPESKFVREGAMGMAKTLVRLGRY 501

Query: 111 QQAASLGEEYI-TQYPESKNVDYVYYLVGMSYAQMIRDVPYD----QRATKLMLQYMSRI 165
           ++AA + + YI  ++P        YY    +    I  +  D        K         
Sbjct: 502 KEAAQIAD-YIDKRWPR-------YY----TEFPQILRITGDIAYKNGDFKKARDCYMLF 549

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
                ++         +              G  Y + G    A+  + L + +Y D+E 
Sbjct: 550 YNMEPDAKDADLVLAKL--------------GDIYARLGNKPGAVDFYNLAIKDYPDSEG 595

Query: 226 AEEAMARLVE 235
              A  RL E
Sbjct: 596 GLVAKMRLAE 605



 Score = 35.5 bits (81), Expect = 8.2,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 39/116 (33%), Gaps = 15/116 (12%)

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           I  +P+S         + M              + K    Y+    ERY  S     A  
Sbjct: 637 IRDHPQSPLAPLAQLKLAMWLLHQQNY----PGSLKESAAYL----ERYPQSELAPKAEE 688

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN---YSDAEHAEEAMARL 233
                  ++AA ++   + Y +    VAA   ++L+  N    SD      A+A L
Sbjct: 689 TAITAFERMAA-DMLAHKDYDRL---VAAYKEYRLINTNRGLLSDTTRLGLALAYL 740


>gi|301384812|ref|ZP_07233230.1| tol-pal system protein YbgF [Pseudomonas syringae pv. tomato Max13]
 gi|302063534|ref|ZP_07255075.1| tol-pal system protein YbgF [Pseudomonas syringae pv. tomato K40]
          Length = 208

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 8/136 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D   ++  YE A   +K ++F KA + F    R +P +  A  +      V  + G 
Sbjct: 81  EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 140

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            Q A     +   QYP+   V    Y +         DV      T  +   + ++V +Y
Sbjct: 141 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 192

Query: 170 TNSPYVKGARFYVTVG 185
             +   + A+  +   
Sbjct: 193 PGTSAAQLAQRDLQRL 208



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
             +I+   +D        Q  +  + +Y NS Y   A++++      LA  +++      
Sbjct: 96  FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 142

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
                  A   F  V   Y       +++ +L +    L   D+ + ++  +  +YP   
Sbjct: 143 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 196

Query: 262 WARYVETLVK 271
            A+  +  ++
Sbjct: 197 AAQLAQRDLQ 206


>gi|331016447|gb|EGH96503.1| tol-pal system protein YbgF [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 208

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 8/136 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D   ++  YE A   +K ++F KA + F    R +P +  A  +      V  + G 
Sbjct: 81  EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 140

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            Q A     +   QYP+   V    Y +         DV      T  +   + ++V +Y
Sbjct: 141 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 192

Query: 170 TNSPYVKGARFYVTVG 185
             +   + A+  +   
Sbjct: 193 PGTSAAQLAQRDLQRL 208



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
             +I+   +D        Q  +  + +Y NS Y   A++++      LA  +++      
Sbjct: 96  FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 142

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
                  A   F  V   Y       +++ +L +    L   D+ + ++  +  +YP   
Sbjct: 143 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 196

Query: 262 WARYVETLVK 271
            A+  +  ++
Sbjct: 197 AAQLAQRDLQ 206


>gi|213161789|ref|ZP_03347499.1| hypothetical protein Salmoneentericaenterica_18034 [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
          Length = 152

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 45/126 (35%), Gaps = 9/126 (7%)

Query: 61  YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A+  +++++    A   F    + +P +     +      + Y+ GK   AA     
Sbjct: 35  YNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFAS 94

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       Y VG+        +  D+  T        +++ +Y  +   K A+
Sbjct: 95  VVKNYPKSPKAADAMYKVGV--------IMQDKGDTAKAKAVYQQVINKYPGTDGAKQAQ 146

Query: 180 FYVTVG 185
             +   
Sbjct: 147 KRLNAM 152



 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      +++Y +S Y   A +++               
Sbjct: 31  ANTDYNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLN----------- 79

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
                +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 80  ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVINKY 136

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 137 PGTDGAKQAQK 147



 Score = 45.5 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I +YP+S       Y +G       +              Y + +V+ Y 
Sbjct: 49  DDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 100

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A + V V                  +G+   A   +Q V+  Y   + A++A 
Sbjct: 101 KSPKAADAMYKVGVIMQ--------------DKGDTAKAKAVYQQVINKYPGTDGAKQAQ 146

Query: 231 ARL 233
            RL
Sbjct: 147 KRL 149


>gi|186684702|ref|YP_001867898.1| TPR repeat-containing serine/threonin protein kinase [Nostoc
           punctiforme PCC 73102]
 gi|186467154|gb|ACC82955.1| serine/threonine protein kinase with TPR repeats [Nostoc
           punctiforme PCC 73102]
          Length = 687

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 54/155 (34%), Gaps = 18/155 (11%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           K  L +   IA   ++G                   Q+E+Y++ +      N+  A + F
Sbjct: 278 KKLLIVLAGIAGLIILGVGVW----FLNLPKPINNAQKELYQEGLDKYDAGNYEGAVKDF 333

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
           N      P   +A           Y  G Y+QA +   + I   P+  N    Y+  G +
Sbjct: 334 NHVIELDPKNALAYN---KRGDTYYRLGDYEQAQADSSQAILLNPQDGN---AYFDRGFA 387

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
           ++++           K  +   ++ ++  ++  Y 
Sbjct: 388 FSEL--------GKYKEAIADYTQAIKLNSDDAYA 414


>gi|189465275|ref|ZP_03014060.1| hypothetical protein BACINT_01621 [Bacteroides intestinalis DSM
           17393]
 gi|189437549|gb|EDV06534.1| hypothetical protein BACINT_01621 [Bacteroides intestinalis DSM
           17393]
          Length = 1010

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 33/73 (45%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
             +YEK   +++  N  +A   F +    +P + V+RK+      + Y    Y +A    
Sbjct: 629 NALYEKGRSYVQTNNSRQAIAAFKELLDKYPESPVSRKAAAEIGLLYYQNDDYDRAIEAY 688

Query: 118 EEYITQYPESKNV 130
           +  +TQYP S+  
Sbjct: 689 KHVVTQYPGSEEA 701



 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/225 (18%), Positives = 76/225 (33%), Gaps = 36/225 (16%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK---- 109
             Y    Y  A +   E++++ A   F + ++          +    A      G     
Sbjct: 514 ETYALAYYNLAYIAFHEKDYTLAQNRFLKFTQL----EKGENAT-ALADAYNRIGDCHLH 568

Query: 110 ---YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
              + +A     +       +   DY +Y + +        V   Q+     +  ++R+ 
Sbjct: 569 VRRFDEAKQYYNKAENM--GTPAGDYSFYQLAL--------VAGLQKDYDGKVALLNRLS 618

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
            +Y NSPY            N L  K    GR Y++      AI  F+ +L  Y ++  +
Sbjct: 619 GKYPNSPYA----------INALYEK----GRSYVQTNNSRQAIAAFKELLDKYPESPVS 664

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
            +A A +   Y      D A E    +  +YP    AR     +K
Sbjct: 665 RKAAAEIGLLYYQNDDYDRAIEAYKHVVTQYPGSEEARLAMRDLK 709



 Score = 39.7 bits (92), Expect = 0.38,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 76/304 (25%), Gaps = 80/304 (26%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD----- 86
           +C  +      +     + +T     + +Y++     +++ ++ A        R      
Sbjct: 9   LCTALCCAPLLATAQTSEKIT---SPQRLYQEGQSLFQQKAYAAAIPPLQAFVRQVDAEG 65

Query: 87  --------------------------------------FPFAGVARKSLLMSAFVQYSAG 108
                                                 +P    A +   + A V +  G
Sbjct: 66  KPLPAEGERMEAEYMLVCAAYELKDTKSIDKLRAYLDEYPDTPYANRIYALMASVYFFEG 125

Query: 109 KYQQAAS--LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
            Y  A +             ++  D + Y +   Y +            K    +   + 
Sbjct: 126 NYDAAMAMFNASRLDLL--GNEERDDMTYRLATCYLKT--------GNVKEAAIWFETL- 174

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKE--------------------VEIGRYYLKRGEY 206
            R T+  YV    +Y++  R      +                      I   YL +  Y
Sbjct: 175 -RSTSKKYVADCTYYLSYIRYTQQRYDDALTGFLSLQDNEKYKALAPYYIAEIYLIKKNY 233

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
             A    Q  L+ Y + E+  E    L +A        EA            +    R  
Sbjct: 234 DKAEIVAQNYLSAYPNNEYTAEMYRVLGDADYHFGKYHEAMGAFEKYLANNKEEAPRRDA 293

Query: 267 ETLV 270
             ++
Sbjct: 294 LYML 297



 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 63/183 (34%), Gaps = 51/183 (27%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL--LMSAF 102
           D Y +S    +   E+    +L+ +  ++ +A E +      +P +  AR ++  L S +
Sbjct: 656 DKYPESPVSRKAAAEI---GLLYYQNDDYDRAIEAYKHVVTQYPGSEEARLAMRDLKSIY 712

Query: 103 VQ------------------------------------YSAGKYQQAASLGEEYITQYPE 126
           V                                     Y  G    A +    Y+  YP 
Sbjct: 713 VDANRVDEFAELAAKVPGEIRFDASEQDSLTYIAAEKVYMKGDIAPAKASFTRYLLSYPN 772

Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-RFYVTVG 185
                  +Y + +        +  +Q+  + +L++  +++E Y ++PY + A      + 
Sbjct: 773 GAFSLNAHYYLCV--------IGKEQKDEEAVLEHAGKLLE-YPDTPYSQEALIARAEIL 823

Query: 186 RNQ 188
            N+
Sbjct: 824 FNR 826



 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 58/190 (30%), Gaps = 27/190 (14%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A  +LK  N  +A  +F                    ++++Y+  +Y  A +    +
Sbjct: 152 YRLATCYLKTGNVKEAAIWFETLRST--SKKYVADCTYYLSYIRYTQQRYDDALTG---F 206

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           ++     K      Y +   Y          ++            +  Y N+ Y      
Sbjct: 207 LSLQDNEKYKALAPYYIAEIY--------LIKKNYDKAEIVAQNYLSAYPNNEYTAEMYR 258

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
            +                Y+   G+Y  A+  F+  LAN  +     +A+  L  +Y   
Sbjct: 259 VLGD------------ADYHF--GKYHEAMGAFEKYLANNKEEAPRRDALYMLGLSYYHS 304

Query: 241 ALMDEAREVV 250
            +  +A   +
Sbjct: 305 GVYTKAANTL 314



 Score = 35.9 bits (82), Expect = 5.9,   Method: Composition-based stats.
 Identities = 18/173 (10%), Positives = 48/173 (27%), Gaps = 22/173 (12%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
                ++  +   +  +Y   + +     ++KA     + +       +++ + L     
Sbjct: 278 EKYLANNKEEAPRRDALYMLGLSYYHSGVYTKAANTLGEVATGN--DALSQNAYLHMGLS 335

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
               G   +A    E+        +  +   Y   +   +          A    +    
Sbjct: 336 YLQMGDKNKARMAFEQASASNANMQIKEQAAYNYALCIHETSYS------AFGESVTVFE 389

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
           + +  + NS YV     Y+                 Y+    Y AA+   + +
Sbjct: 390 KFLNEFPNSQYVDKVSSYLVEV--------------YMNTRSYEAALKSIERI 428


>gi|330950599|gb|EGH50859.1| tol-pal system protein YbgF [Pseudomonas syringae Cit 7]
          Length = 208

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 8/136 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D   ++  YE A   +K ++F KA + F    R +P +  A  +      V  + G 
Sbjct: 81  EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 140

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            Q A     +   QYP+   V    Y +         DV      T  +   + ++V +Y
Sbjct: 141 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 192

Query: 170 TNSPYVKGARFYVTVG 185
             +   + A+  +   
Sbjct: 193 PGTSAAQLAQRDLQRL 208



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
             +I+   +D        Q  +  + +Y NS Y   A++++      LA  +++      
Sbjct: 96  FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 142

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
                  A   F  V   Y       +++ +L +    L   D+ + ++  +  +YP   
Sbjct: 143 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 196

Query: 262 WARYVETLVK 271
            A+  +  ++
Sbjct: 197 AAQLAQRDLQ 206


>gi|218885367|ref|YP_002434688.1| tol-pal system protein YbgF [Desulfovibrio vulgaris str. 'Miyazaki
           F']
 gi|218756321|gb|ACL07220.1| tol-pal system protein YbgF [Desulfovibrio vulgaris str. 'Miyazaki
           F']
          Length = 333

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/121 (12%), Positives = 48/121 (39%), Gaps = 8/121 (6%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y++ +    E+ +  + + F   +  F    +   +        +    + ++A   E+
Sbjct: 215 LYDQGMTAFNERRYKDSVKAFTDFTNTFGDHKLTSNAWFWQGEANFQQQDFARSALAYEQ 274

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            I++YP+S          G+ + ++ +    D    +     +  ++++  +SP  + A+
Sbjct: 275 VISKYPKSPKYASSLLKQGICFYKLGK---KDAGKVR-----LEELIKKLPDSPEAQRAK 326

Query: 180 F 180
            
Sbjct: 327 K 327



 Score = 44.3 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 45/131 (34%), Gaps = 22/131 (16%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           ++  +Y+ +     ++   + + K     ++  G +  Q        Q   +  L Y  +
Sbjct: 223 FNERRYKDSVKAFTDFTNTFGDHKLTSNAWFWQGEANFQQ-------QDFARSALAY-EQ 274

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           ++ +Y  SP    +     +   +L  K+              A   R + ++    D+ 
Sbjct: 275 VISKYPKSPKYASSLLKQGICFYKLGKKD--------------AGKVRLEELIKKLPDSP 320

Query: 225 HAEEAMARLVE 235
            A+ A   L E
Sbjct: 321 EAQRAKKFLSE 331



 Score = 35.9 bits (82), Expect = 6.7,   Method: Composition-based stats.
 Identities = 15/145 (10%), Positives = 40/145 (27%), Gaps = 38/145 (26%)

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA--------RFYVTVG 185
            Y  GM+           +R  K  ++  +     + +      A               
Sbjct: 215 LYDQGMTAFN--------ERRYKDSVKAFTDFTNTFGDHKLTSNAWFWQGEANFQQQDFA 266

Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
           R+ LA                      ++ V++ Y  +     ++ +    +  L   D 
Sbjct: 267 RSALA----------------------YEQVISKYPKSPKYASSLLKQGICFYKLGKKDA 304

Query: 246 AREVVSLIQERYPQGYWARYVETLV 270
            +  +  + ++ P    A+  +  +
Sbjct: 305 GKVRLEELIKKLPDSPEAQRAKKFL 329


>gi|330964832|gb|EGH65092.1| tol-pal system protein YbgF [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 208

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 8/136 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D   ++  YE A   +K ++F KA + F    R +P +  A  +      V  + G 
Sbjct: 81  EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 140

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            Q A     +   QYP+   V    Y +         DV      T  +   + ++V +Y
Sbjct: 141 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 192

Query: 170 TNSPYVKGARFYVTVG 185
             +   + A+  +   
Sbjct: 193 PGTSAAQLAQRDLQRL 208



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
             +I+   +D        Q  +  + +Y NS Y   A++++      LA  +++      
Sbjct: 96  FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 142

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
                  A   F  V   Y       +++ +L +    L   D+ + ++  +  +YP   
Sbjct: 143 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 196

Query: 262 WARYVETLVK 271
            A+  +  ++
Sbjct: 197 AAQLAQRDLQ 206


>gi|330872645|gb|EGH06794.1| tol-pal system protein YbgF [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 208

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 8/136 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D   ++  YE A   +K ++F KA + F    R +P +  A  +      V  + G 
Sbjct: 81  EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 140

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            Q A     +   QYP+   V    Y +         DV      T  +   + ++V +Y
Sbjct: 141 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 192

Query: 170 TNSPYVKGARFYVTVG 185
             +   + A+  +   
Sbjct: 193 PGTSAAQLAQRDLQRL 208



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
             +I+   +D        Q  +  + +Y NS Y   A++++      LA  +++      
Sbjct: 96  FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 142

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
                  A   F  V   Y       +++ +L +    L   D+ + ++  +  +YP   
Sbjct: 143 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 196

Query: 262 WARYVETLVK 271
            A+  +  ++
Sbjct: 197 AAQLAQRDLQ 206


>gi|257487002|ref|ZP_05641043.1| hypothetical protein PsyrptA_27255 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|330988977|gb|EGH87080.1| tol-pal system protein YbgF [Pseudomonas syringae pv. lachrymans
           str. M301315]
 gi|331009356|gb|EGH89412.1| tol-pal system protein YbgF [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 208

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 8/136 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D   ++  YE A   +K ++F KA + F    R +P +  A  +      V  + G 
Sbjct: 81  EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 140

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            Q A     +   QYP+   V    Y +         DV      T  +   + ++V +Y
Sbjct: 141 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 192

Query: 170 TNSPYVKGARFYVTVG 185
             +   + A+  +   
Sbjct: 193 PGTSAAQLAQRDLQRL 208



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
             +I+   +D        Q  +  + +Y NS Y   A++++      LA  +++      
Sbjct: 96  FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 142

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
                  A   F  V   Y       +++ +L +    L   D+ + ++  +  +YP   
Sbjct: 143 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 196

Query: 262 WARYVETLVK 271
            A+  +  ++
Sbjct: 197 AAQLAQRDLQ 206


>gi|70732081|ref|YP_261837.1| hypothetical protein PFL_4756 [Pseudomonas fluorescens Pf-5]
 gi|68346380|gb|AAY93986.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5]
          Length = 270

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 48/131 (36%), Gaps = 8/131 (6%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D   ++  Y+ A   +K ++F KA + F+   R +P +  A  +      V  + G 
Sbjct: 143 EPGDPAKEKLYYDAAFDLIKAKDFDKASQAFSAFLRKYPNSQYAGNAQYWLGEVNLAKGD 202

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            Q A     +    YP+   V    Y +         DV      T  +   + ++V +Y
Sbjct: 203 LQGAGQAFAKVSQLYPKHAKVPDSLYKLA--------DVERRLGHTDRVKGILQQVVAQY 254

Query: 170 TNSPYVKGARF 180
             +   + A+ 
Sbjct: 255 PGTSAAQLAQR 265



 Score = 49.3 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 52/147 (35%), Gaps = 22/147 (14%)

Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
           P     + +YY        +I+   +D        Q  S  + +Y NS Y   A++++  
Sbjct: 144 PGDPAKEKLYYDAA---FDLIKAKDFD-----KASQAFSAFLRKYPNSQYAGNAQYWLGE 195

Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
               LA  +++             A   F  V   Y       +++ +L +    L   D
Sbjct: 196 VN--LAKGDLQ------------GAGQAFAKVSQLYPKHAKVPDSLYKLADVERRLGHTD 241

Query: 245 EAREVVSLIQERYPQGYWARYVETLVK 271
             + ++  +  +YP    A+  +  ++
Sbjct: 242 RVKGILQQVVAQYPGTSAAQLAQRDLQ 268


>gi|329295950|ref|ZP_08253286.1| tol-pal system protein YbgF [Plautia stali symbiont]
          Length = 205

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/143 (13%), Positives = 49/143 (34%), Gaps = 9/143 (6%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
            +    +          Y  AV   L+++ + ++        + +P +     +      
Sbjct: 71  SNTAAAAPAQTGDANTDYNAAVALILEKKQYDQSITALQAWVKKYPDSTYQPNANYWLGQ 130

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
           + Y+ GK   AA      +  YP+S       + VG+        +  ++  T       
Sbjct: 131 LFYNKGKKDDAAYYFATVVKNYPKSPKAAEALFKVGV--------IMQEKNDTAKAKAVY 182

Query: 163 SRIVERYTNSPYVKGARFYVTVG 185
            ++++++ NS   K A+  +   
Sbjct: 183 QQVIKQFPNSESAKQAQKRLAAM 205



 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 43/112 (38%), Gaps = 14/112 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             +  +   V++Y +S Y   A +++                +Y K  +  AA   F  V
Sbjct: 103 QSITALQAWVKKYPDSTYQPNANYWLGQL-------------FYNKGKKDDAA-YYFATV 148

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           + NY  +  A EA+ ++           +A+ V   + +++P    A+  + 
Sbjct: 149 VKNYPKSPKAAEALFKVGVIMQEKNDTAKAKAVYQQVIKQFPNSESAKQAQK 200



 Score = 39.7 bits (92), Expect = 0.47,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 48/127 (37%), Gaps = 22/127 (17%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +Y Q+ +  + ++ +YP+S       Y +G  +    +              Y + +V+
Sbjct: 99  KQYDQSITALQAWVKKYPDSTYQPNANYWLGQLFYNKGKKDD--------AAYYFATVVK 150

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y  SP    A F V V                 ++ +   A   +Q V+  + ++E A+
Sbjct: 151 NYPKSPKAAEALFKVGVIMQ--------------EKNDTAKAKAVYQQVIKQFPNSESAK 196

Query: 228 EAMARLV 234
           +A  RL 
Sbjct: 197 QAQKRLA 203



 Score = 36.2 bits (83), Expect = 5.4,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 30/71 (42%), Gaps = 2/71 (2%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           L++ +Y  +I   Q  +  Y D+ +   A   L + +      D+A    + + + YP+ 
Sbjct: 96  LEKKQYDQSITALQAWVKKYPDSTYQPNANYWLGQLFYNKGKKDDAAYYFATVVKNYPKS 155

Query: 261 YWARYVETLVK 271
              +  E L K
Sbjct: 156 --PKAAEALFK 164


>gi|313202057|ref|YP_004040715.1| tol-pal system protein ybgf [Methylovorus sp. MP688]
 gi|312441373|gb|ADQ85479.1| tol-pal system protein YbgF [Methylovorus sp. MP688]
          Length = 270

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 55/138 (39%), Gaps = 8/138 (5%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           +        + +  + A   L+   F ++++ + +  + +P +  A  ++    F Q+S 
Sbjct: 136 VTEAPASSSEAKDLDAANALLQASKFKESFDAYQKFLQAYPASTHAADAMYGLGFSQFSL 195

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
             Y+ A +  ++ + QYP+S       + +  S    I+    D        + +  ++ 
Sbjct: 196 KNYKAAIATQQKLLKQYPDSAKAPEASFNIANS---QIQLADID-----GAKKTLRDLIS 247

Query: 168 RYTNSPYVKGARFYVTVG 185
           +Y  S  +  A+  + V 
Sbjct: 248 QYPKSDVIPHAQSRLKVL 265



 Score = 55.9 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 46/116 (39%), Gaps = 14/116 (12%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           K       + ++ Y  S +   A + +   +  L                Y AAI   Q 
Sbjct: 162 KESFDAYQKFLQAYPASTHAADAMYGLGFSQFSL--------------KNYKAAIATQQK 207

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           +L  Y D+  A EA   +  + + LA +D A++ +  +  +YP+     + ++ +K
Sbjct: 208 LLKQYPDSAKAPEASFNIANSQIQLADIDGAKKTLRDLISQYPKSDVIPHAQSRLK 263



 Score = 53.6 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 53/136 (38%), Gaps = 22/136 (16%)

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
           L +A     A K++++    ++++  YP S +     Y +G S   +        +  K 
Sbjct: 149 LDAANALLQASKFKESFDAYQKFLQAYPASTHAADAMYGLGFSQFSL--------KNYKA 200

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
            +    +++++Y +S     A F +   + QLA  +               A    + ++
Sbjct: 201 AIATQQKLLKQYPDSAKAPEASFNIANSQIQLADID--------------GAKKTLRDLI 246

Query: 218 ANYSDAEHAEEAMARL 233
           + Y  ++    A +RL
Sbjct: 247 SQYPKSDVIPHAQSRL 262


>gi|289674680|ref|ZP_06495570.1| tol-pal system protein YbgF [Pseudomonas syringae pv. syringae FF5]
 gi|330936709|gb|EGH40897.1| tol-pal system protein YbgF [Pseudomonas syringae pv. pisi str.
           1704B]
 gi|330975319|gb|EGH75385.1| tol-pal system protein YbgF [Pseudomonas syringae pv. aptata str.
           DSM 50252]
          Length = 208

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 8/136 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D   ++  YE A   +K ++F KA + F    R +P +  A  +      V  + G 
Sbjct: 81  EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 140

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            Q A     +   QYP+   V    Y +         DV      T  +   + ++V +Y
Sbjct: 141 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 192

Query: 170 TNSPYVKGARFYVTVG 185
             +   + A+  +   
Sbjct: 193 PGTSAAQLAQRDLQRL 208



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
             +I+   +D        Q  +  + +Y NS Y   A++++      LA  +++      
Sbjct: 96  FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 142

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
                  A   F  V   Y       +++ +L +    L   D+ + ++  +  +YP   
Sbjct: 143 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 196

Query: 262 WARYVETLVK 271
            A+  +  ++
Sbjct: 197 AAQLAQRDLQ 206


>gi|167763754|ref|ZP_02435881.1| hypothetical protein BACSTE_02134 [Bacteroides stercoris ATCC
           43183]
 gi|167697870|gb|EDS14449.1| hypothetical protein BACSTE_02134 [Bacteroides stercoris ATCC
           43183]
          Length = 1010

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 1/83 (1%)

Query: 49  DSVTDVRYQ-REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           D   +  Y    +YEK   +++ +N S+A   F +    +P + V+RK+      + Y  
Sbjct: 619 DKYPNSPYAVSALYEKGRSYVQGRNNSQAIATFRELLNKYPESPVSRKAATEIGLLYYQN 678

Query: 108 GKYQQAASLGEEYITQYPESKNV 130
             Y +A    +  ITQYP S+  
Sbjct: 679 DDYNRAIEAYKYVITQYPGSEEA 701



 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 76/223 (34%), Gaps = 36/223 (16%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK------ 109
           Y    Y  A +   +++++ A + F +  +       A  + +  A      G       
Sbjct: 516 YALAYYNLAYIAFHKKDYATAQDRFLKFIQL----RKAGDATV-LADAYNRVGDCYMQVR 570

Query: 110 -YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
            + +A             +   DY YY + +          YD + T      ++R+ ++
Sbjct: 571 RFDEAKQYYTRAENL--GTPAGDYSYYQLALVSGLQK---DYDGKIT-----LLNRLADK 620

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y NSPY   A                E GR Y++      AI  F+ +L  Y ++  + +
Sbjct: 621 YPNSPYAVSAL--------------YEKGRSYVQGRNNSQAIATFRELLNKYPESPVSRK 666

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           A   +   Y      + A E    +  +YP    AR     +K
Sbjct: 667 AATEIGLLYYQNDDYNRAIEAYKYVITQYPGSEEARLAMRDLK 709



 Score = 39.7 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 37/253 (14%), Positives = 70/253 (27%), Gaps = 59/253 (23%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD-----FPFAGVA--RKSLLMSAFVQY 105
            +   + +YE+     +++ F+ A        +       P +      ++  M    +Y
Sbjct: 27  KITSPQRLYEEGESLFRQKAFAAAMPPLQAFIKQTDAEGAPVSAAGNKEEAEYMLVCAEY 86

Query: 106 SAGKYQQAASLGEEYITQYPESKNV-----------------DYVYYLVGMSYAQMIRDV 148
                  +  L  EY+  YP++ +                  D    +   S   ++ + 
Sbjct: 87  ELRN-PNSIELLREYLDAYPDTPHANRICALIASAYFFEGKYDDALAMFNSSRLDLLSNE 145

Query: 149 PYDQ------------RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR-------NQL 189
             D                K    +   +  R T S Y     +Y+   R       + L
Sbjct: 146 ERDDMTYRLATCYLKTGNVKEAAIWFETL--RSTGSRYTADCTYYLAYIRYSQQRYDDAL 203

Query: 190 ---------AAKE----VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                    A  E      I   YL +  Y  A    Q  L+ Y + ++  E       A
Sbjct: 204 NGFLSLQDNAKYEALVPYYIAEIYLIKKNYDKAEIVAQNYLSAYPNQKYTGEMYRIQGTA 263

Query: 237 YVALALMDEAREV 249
                   EA + 
Sbjct: 264 DYHFGKYHEAIKA 276



 Score = 39.3 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 59/175 (33%), Gaps = 50/175 (28%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL--LMSAF 102
           + Y +S    +   E+    +L+ +  ++++A E +      +P +  AR ++  L S +
Sbjct: 656 NKYPESPVSRKAATEI---GLLYYQNDDYNRAIEAYKYVITQYPGSEEARLAMRDLKSIY 712

Query: 103 VQ------------------------------------YSAGKYQQAASLGEEYITQYPE 126
           V+                                    Y  G+   A      Y+  YP 
Sbjct: 713 VEANRVDEFAALAAQMPGVIRFEPNEQDSLTYIAAEKVYMKGEIIPARESFTRYLQSYPN 772

Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                  +Y     Y  +I     D+      L++  +++E Y +SPY + A   
Sbjct: 773 GAFSLNAHY-----YLSLIGKEQKDETGV---LEHTGKLLE-YPDSPYSEEALLM 818


>gi|148559585|ref|YP_001259547.1| TPR repeat-containing molluscan rhodopsin [Brucella ovis ATCC
           25840]
 gi|148370842|gb|ABQ60821.1| TPR repeat:Molluscan rhodopsin C- tail [Brucella ovis ATCC 25840]
          Length = 488

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 50/127 (39%), Gaps = 8/127 (6%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           +  + S+        +Y+ A  +L   ++  A   F +  + +P   +  ++        
Sbjct: 352 NDAVASLPTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESL 411

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y  G+Y +AA+L  +    YP+SK      + +GM+  +M            +     ++
Sbjct: 412 YGQGRYPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNH--------DVACATFAQ 463

Query: 165 IVERYTN 171
           I +RY  
Sbjct: 464 IPQRYPK 470



 Score = 43.2 bits (101), Expect = 0.036,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 8/104 (7%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           SL  +A+    +G Y+ A +   E++ +YP         + +G S     R         
Sbjct: 366 SLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYP------- 418

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
                        Y +S       F + +   ++   +V    +
Sbjct: 419 -EAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATF 461



 Score = 38.9 bits (90), Expect = 0.77,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 14/107 (13%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         V+RY   P    ARF++                    +G Y  A   
Sbjct: 378 GDYKAAEAGFREHVKRYPADPMTAEARFWLGESL--------------YGQGRYPEAATL 423

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           F     +Y D++ A E M +L  A   +   D A    + I +RYP+
Sbjct: 424 FIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYPK 470



 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 23/68 (33%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +    YL  G+Y AA   F+  +  Y       EA   L E+        EA  +    
Sbjct: 368 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 427

Query: 254 QERYPQGY 261
           Q  YP   
Sbjct: 428 QRDYPDSK 435


>gi|220925334|ref|YP_002500636.1| tol-pal system protein YbgF [Methylobacterium nodulans ORS 2060]
 gi|219949941|gb|ACL60333.1| tol-pal system protein YbgF [Methylobacterium nodulans ORS 2060]
          Length = 304

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 36/99 (36%), Gaps = 8/99 (8%)

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           K+    A+      +Y+QA     ++I  +P    V    Y +G +Y Q  R        
Sbjct: 179 KADYEMAYAYVLQRQYEQAEMSLRQFIQSHPRDALVPDATYWLGETYLQRNR-------- 230

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
           T+   +   ++   Y  S     A   +    N L A+E
Sbjct: 231 TREAAEQFLKVSTDYARSRKAPEAMLKLGASLNALGARE 269



 Score = 48.6 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 46/110 (41%), Gaps = 14/110 (12%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           QR  +     + + ++ +     V  A +++              G  YL+R     A  
Sbjct: 191 QRQYEQAEMSLRQFIQSHPRDALVPDATYWL--------------GETYLQRNRTREAAE 236

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +F  V  +Y+ +  A EAM +L  +  AL   ++A   ++ ++ ++PQ  
Sbjct: 237 QFLKVSTDYARSRKAPEAMLKLGASLNALGAREQACATLAELERKFPQAS 286


>gi|153805821|ref|ZP_01958489.1| hypothetical protein BACCAC_00058 [Bacteroides caccae ATCC 43185]
 gi|149130498|gb|EDM21704.1| hypothetical protein BACCAC_00058 [Bacteroides caccae ATCC 43185]
          Length = 1005

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/269 (14%), Positives = 76/269 (28%), Gaps = 55/269 (20%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
           +C  +            D  T       +Y++     +E+N++ A        +  P A 
Sbjct: 9   ICATICCAPIIGFAQTGDKFT---SADNLYKEGKELFQEKNYAAALPALKAFVKQKPTAS 65

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA--------- 142
           + + +  M     Y      +   L  +Y+  YP++   + +Y L+   Y          
Sbjct: 66  LLQDAEYMLVSSAYELNDKNR-IELLRKYLDHYPDTPYANRIYSLLASCYFYEGKYDEAM 124

Query: 143 --------QMIRDVPYDQR------------ATKLMLQYMSRIVERYTNSPYVKGARFYV 182
                    ++ +   D R              +    +   +        Y     +Y+
Sbjct: 125 ALFNSTDLDLLNNEERDDRTYQLATCYLKTNDLREAAIWFETLRANSP--KYATDCDYYI 182

Query: 183 TVGRNQLAAKE--------------------VEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
           +  R                             I   Y++   Y  A    Q  L+ Y +
Sbjct: 183 SYIRYTQKRYNEALKGFLPLQDNAKYKALVPYYIAEIYVQLKNYDKAQIVAQNYLSAYPN 242

Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVS 251
            EHA E    L +AY       +A E  S
Sbjct: 243 NEHAAEMYRILGDAYYHFGQYPQAVEAFS 271



 Score = 54.0 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 73/214 (34%), Gaps = 28/214 (13%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           Y    +    +++++A  YF +     +      +A  +             +++A    
Sbjct: 513 YNLGYIAFHRKDYTQASNYFQKYIQLEKGENTTALA-DAYNRIGDCHLHVRNFEEAKHYY 571

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
            +       + + DY +Y + +                   +  ++R+V +Y  SPY   
Sbjct: 572 SQAEQMN--TPSGDYSFYQLALVSGLQKDYTGK--------ITLLNRLVGKYPASPYAVN 621

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           A                E GR Y+       AI  F+ +L  Y ++  + +A A +   +
Sbjct: 622 AI--------------YEKGRSYVLMDNNNQAITSFKELLNKYPESPVSRKAAAEIGLLF 667

Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
                 ++A E    + E+YP    AR     +K
Sbjct: 668 YQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLK 701



 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 34/80 (42%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                    +YEK   ++   N ++A   F +    +P + V+RK+      + Y  G Y
Sbjct: 614 PASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLNKYPESPVSRKAAAEIGLLFYQKGDY 673

Query: 111 QQAASLGEEYITQYPESKNV 130
            QA    ++ I +YP S+  
Sbjct: 674 NQAIEAYKQVIEKYPGSEEA 693



 Score = 48.6 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 46/125 (36%), Gaps = 8/125 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A++   +++++      N+    +P +  A  ++              QA +  +E 
Sbjct: 587 YQLALVSGLQKDYTGKITLLNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKEL 646

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           + +YPES         +G+ + Q               ++   +++E+Y  S   + A  
Sbjct: 647 LNKYPESPVSRKAAAEIGLLFYQK--------GDYNQAIEAYKQVIEKYPGSEEARLAMR 698

Query: 181 YVTVG 185
            +   
Sbjct: 699 DLKSI 703



 Score = 44.3 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 77/220 (35%), Gaps = 36/220 (16%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A ++++ +N+ KA          +P    A +   +     Y  G+Y QA      Y
Sbjct: 214 YYIAEIYVQLKNYDKAQIVAQNYLSAYPNNEHAAEMYRILGDAYYHFGQYPQAVEAFSNY 273

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           + +       D   Y++G+SY Q         +      + + ++     N    + A  
Sbjct: 274 LDREHAVPRRD-ALYMLGLSYYQT--------KVYSKAAETLGKVTTE--NDALTQNAYL 322

Query: 181 YVTVGRNQLAAK---------------EVEI---GRYYL-------KRGEYVAAIPRFQL 215
           ++ +   QLA K                ++I     Y             +  ++  F+ 
Sbjct: 323 HMGLSYLQLAEKNKARMAFEQAAASNANMQIKEQAAYNYALCLHETSFSAFGESVTAFEK 382

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
            L  +  + +AE+  + LVE Y+     D A + +  I +
Sbjct: 383 FLNEFPTSPYAEKVSSYLVEVYMNTRSYDAALKSIDRIAK 422



 Score = 40.5 bits (94), Expect = 0.24,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 77/218 (35%), Gaps = 26/218 (11%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL--L 98
            S +++          ++   E  +LF ++ ++++A E + Q    +P +  AR ++  L
Sbjct: 641 TSFKELLNKYPESPVSRKAAAEIGLLFYQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDL 700

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
            S +V  +      A +         P     D       ++Y    +         +  
Sbjct: 701 KSIYVDLNRIDEFAALANAM------PGHIRFD-ANEQDSLTYTAAEKIYMK--GRMEEA 751

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
              +++ ++ +    +   A +Y+ +  ++    ++ +    L  G+           L 
Sbjct: 752 KTSLNKYLQTFPEGAFSLNAHYYLCLIGSEQKNYDMIL----LHSGK-----------LL 796

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            Y +   AEEA+    E         EA     +++E+
Sbjct: 797 EYPNNPFAEEALILRAEVQFNQQNTAEALASYKMLKEK 834



 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/165 (13%), Positives = 50/165 (30%), Gaps = 22/165 (13%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
           YLD    V  +  +Y   + + + + +SKA E   + + +     + + + L        
Sbjct: 273 YLDREHAVPRRDALYMLGLSYYQTKVYSKAAETLGKVTTEN--DALTQNAYLHMGLSYLQ 330

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
             +  +A    E+        +  +   Y   +   +          A    +    + +
Sbjct: 331 LAEKNKARMAFEQAAASNANMQIKEQAAYNYALCLHETSFS------AFGESVTAFEKFL 384

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
             +  SPY +    Y+                 Y+    Y AA+ 
Sbjct: 385 NEFPTSPYAEKVSSYLVEV--------------YMNTRSYDAALK 415


>gi|317153857|ref|YP_004121905.1| tetratricopeptide domain-containing protein [Desulfovibrio
           aespoeensis Aspo-2]
 gi|316944108|gb|ADU63159.1| tetratricopeptide domain protein [Desulfovibrio aespoeensis Aspo-2]
          Length = 1061

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 41/103 (39%), Gaps = 14/103 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
               Y   + + Y +   +                     G YY K G+Y+ A  +FQ +
Sbjct: 509 EAKAYFKVLQDNYPDDDNIPSIS--------------YYWGEYYYKMGDYLKAADQFQYL 554

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           +  Y + +  +EA   L ++      +++A ++V  I +R+P 
Sbjct: 555 IQTYPEHQLVKEAAYYLADSLNRTGFVEQAYQIVDYIDKRWPD 597



 Score = 48.6 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 67/274 (24%), Gaps = 88/274 (32%)

Query: 73  FSKAYEYFNQCSRDFP-----------FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           F +A  YF     ++P           +               Y  G Y +AA   +  I
Sbjct: 507 FPEAKAYFKVLQDNYPDDDNIPSISYYWGEY-----------YYKMGDYLKAADQFQYLI 555

Query: 122 TQYPESKNVDYVYYLVGMS-----------------------YAQMIRDVPYDQRATKLM 158
             YPE + V    Y +  S                       Y     +        ++ 
Sbjct: 556 QTYPEHQLVKEAAYYLADSLNRTGFVEQAYQIVDYIDKRWPDYYMENAEFLRLAGGVEMA 615

Query: 159 LQYMSRIVERY-------TNSPYVKGARFYVTVGRNQLAA-------KEVEIGRY----- 199
           L  +      Y        +S         +     +           E  +  Y     
Sbjct: 616 LDKLQEAKNHYFTYYNLNPDSEGADVVLARIGDIYVRQGEKGAAKQIYERAVLDYPDKEG 675

Query: 200 -------------YLK--RGEYVAAIPR---------FQLVLANYSDAEHAEEAMARLVE 235
                        Y     G+ V+   R         +Q ++  Y D+  A  A  +L  
Sbjct: 676 GLIARMRLAEEGIYDDPTMGDMVSVFDRPYNLRPEMIYQEIVERYPDSPLAPIAQLKLAM 735

Query: 236 AYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
            +       EA      + E+YP     R   TL
Sbjct: 736 WHAFNKQYPEALGAAQDLIEKYPDSPLVRTARTL 769


>gi|262197144|ref|YP_003268353.1| hypothetical protein Hoch_3961 [Haliangium ochraceum DSM 14365]
 gi|262080491|gb|ACY16460.1| Tetratricopeptide TPR_2 repeat protein [Haliangium ochraceum DSM
           14365]
          Length = 1058

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/140 (23%), Positives = 58/140 (41%), Gaps = 23/140 (16%)

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
              + A+L  + + ++P+ +  D V YLVG +          +Q+  +  L+Y  ++VER
Sbjct: 161 DLDEPAALYRQLLAEFPQFRRADLVLYLVGFA--------AREQQQYQESLEYFGQVVER 212

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y +SP    A               + IG +Y   G++  A   +  VLA   D+   + 
Sbjct: 213 YPDSPLYGDAW--------------MMIGEHYFSTGQWPEARAAYANVLAR-PDSPTYDL 257

Query: 229 AMARLVEAYVALALMDEARE 248
           A+ +   A   L   D A  
Sbjct: 258 ALFKTAWADWKLGDPDLAAR 277



 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 80/231 (34%), Gaps = 28/231 (12%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y       ++Q + ++ EYF Q    +P + +   + +M     +S G++ +A +    
Sbjct: 186 LYLVGFAAREQQQYQESLEYFGQVVERYPDSPLYGDAWMMIGEHYFSTGQWPEARAAYAN 245

Query: 120 YITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSRIVE 167
            + + P+S   D   +    +              + + D+  +   +   +Q   R   
Sbjct: 246 VLAR-PDSPTYDLALFKTAWADWKLGDPDLAARRFKQVLDLAVEAETSGSAVQRRRRAQL 304

Query: 168 RYTNSPY-----VKGARFYVTVGRNQLA-----AKE----VEIGRYYLKRGEYVAAIPRF 213
           R     Y      +          + LA            V +   Y  + EY  A   +
Sbjct: 305 RDEALEYLVVVFTEDRSISAQEVYDFLASIGGTRYSRDVLVRVADAYFGQSEYERAAQTY 364

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY-PQGYWA 263
           + ++        A E    +VEAYVA    ++    + L+ E Y P   WA
Sbjct: 365 RFLIDMKPTGIEAAEYQRAVVEAYVAALQPEQVEAEMRLLVENYGPASKWA 415



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 58/188 (30%), Gaps = 22/188 (11%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              + +   F KA  ++ +  ++FP   +A ++ + +  +   A + Q+A          
Sbjct: 662 GERYAEAGEFEKAASFYLRIPQEFPQHTMAAQAQMNAGVMYEKAKRPQRAGQAYLALAAS 721

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
           YP+SK      +  G    + +              +    + E +  S     A F   
Sbjct: 722 YPDSKEAPKAAFAAGQ-LYESVAYFDR-------AAEAYEVVAETFPRSEQSADALFNAG 773

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
           + R  L   E               AI  +Q     Y     A E   R+   Y      
Sbjct: 774 LLRQSLDQNE--------------RAIEHYQTYAKRYRGKADAAEVAFRIGVVYENAERY 819

Query: 244 DEAREVVS 251
           D+A +   
Sbjct: 820 DDAADAYR 827



 Score = 38.9 bits (90), Expect = 0.74,   Method: Composition-based stats.
 Identities = 27/224 (12%), Positives = 71/224 (31%), Gaps = 29/224 (12%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF----AGVARKSLLMSAFV--Q 104
             D      ++    +F    ++ +A + +      +P          + L   A     
Sbjct: 566 PADPELVGVIFRNGEMFYDYGDYDEAIKRYGLIVTKYPDDQNAGPAGDRILESLAKAEDY 625

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY--DQRATKLMLQYM 162
            +  ++ +     + + ++  +S+       L  +    + +      +    +    + 
Sbjct: 626 ENIEEWARKLKTAKAFQSKEQQSR-------LDRLIVESIGKSGERYAEAGEFEKAASFY 678

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
            RI + +        A+              +  G  Y K      A   +  + A+Y D
Sbjct: 679 LRIPQEFPQHTMAAQAQ--------------MNAGVMYEKAKRPQRAGQAYLALAASYPD 724

Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
           ++ A +A     + Y ++A  D A E   ++ E +P+   +   
Sbjct: 725 SKEAPKAAFAAGQLYESVAYFDRAAEAYEVVAETFPRSEQSADA 768



 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 64/204 (31%), Gaps = 42/204 (20%)

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEY-ITQYPESKNVDYVYYLVGM--SYAQMI 145
               +R  L+  A   +   +Y++AA     + I   P         Y   +  +Y   +
Sbjct: 336 GTRYSRDVLVRVADAYFGQSEYERAAQTY-RFLIDMKPTGIEA--AEYQRAVVEAYVAAL 392

Query: 146 RDVPYDQRATKLMLQYMSRIVERY-TNSPYVKG------ARFYVTVGRNQLAAKEVEIGR 198
           +         + +   M  +VE Y   S + +        +         +        +
Sbjct: 393 Q--------PEQVEAEMRLLVENYGPASKWAEQNAKFPTRKARSERLTEAMVRN---TAK 441

Query: 199 YY-------LKRGE------YVAAIPRFQLVLANYSDAEHAEEAMARLVEA---YVALAL 242
            Y        KR +      Y  A   +Q  L  Y   EH   A  R + A   Y  L  
Sbjct: 442 NYHAEAQAAEKRDKKPDLALYTQAADLYQTYLTAY--TEHENAAEVRFLRAEILYFKLGK 499

Query: 243 MDEAREVVSLIQERYPQGYWARYV 266
           ++EA +    + ++ P G + +  
Sbjct: 500 LEEAGDEYLAVAQQTPVGKYHKDA 523



 Score = 35.1 bits (80), Expect = 9.9,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 60/168 (35%), Gaps = 18/168 (10%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                  +  +    L+     F +A E +   +  FP +  +  +L  +  ++ S  + 
Sbjct: 723 PDSKEAPKAAFAAGQLYESVAYFDRAAEAYEVVAETFPRSEQSADALFNAGLLRQSLDQN 782

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           ++A    + Y  +Y    +   V + +G+ Y    R                 R ++ + 
Sbjct: 783 ERAIEHYQTYAKRYRGKADAAEVAFRIGVVYENAERYDD--------AADAYRRYLKGHA 834

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR--GEYVAAIPRFQLV 216
            S        +V     ++   E+  GR  LKR   E+ AA+  F+ +
Sbjct: 835 RS------GRHVVEAHTRVGRSELAAGR--LKRAGNEFDAALKVFRRL 874


>gi|268316245|ref|YP_003289964.1| Extracellular ligand-binding receptor [Rhodothermus marinus DSM
           4252]
 gi|262333779|gb|ACY47576.1| Extracellular ligand-binding receptor [Rhodothermus marinus DSM
           4252]
          Length = 476

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 53/135 (39%), Gaps = 11/135 (8%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           AL + + + +  L  W            +  +      + +A+   +  ++  AY  F +
Sbjct: 8   ALLMVWLLGLTGLGAWA-------QPAEIPRIEAAETEFVQALQAFERGDYGLAYRQFRR 60

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
               +P       + +M+A   Y  G+Y       +E++ +YP S+       L  ++ A
Sbjct: 61  VIDAYPAHRRTTAAWIMAAKALYRMGEYDHVIRWADEFVARYPTSRYRSEAERLRHLAEA 120

Query: 143 QMIRDVPYDQRATKL 157
            + R     Q+AT+L
Sbjct: 121 ALHRR----QQATRL 131


>gi|317478355|ref|ZP_07937519.1| tetratricopeptide [Bacteroides sp. 4_1_36]
 gi|316905514|gb|EFV27304.1| tetratricopeptide [Bacteroides sp. 4_1_36]
          Length = 1014

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 33/73 (45%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
             +YEK   +++  N  +A   F +    +P + V+RK+      + Y    Y +A    
Sbjct: 633 NALYEKGRSYVQSNNSPQAIAAFRELLGKYPESPVSRKAAAEIGLLYYQNDDYDRAIEAY 692

Query: 118 EEYITQYPESKNV 130
           +  +TQYP S+  
Sbjct: 693 KHVVTQYPGSEEA 705



 Score = 52.0 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 45/126 (35%), Gaps = 8/126 (6%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            Y+ A++   ++++S      ++ +  +P +  A  +L         +    QA +   E
Sbjct: 598 YYQLALVAGLQKDYSGKVTLLDRLAVKYPNSPYAINALYEKGRSYVQSNNSPQAIAAFRE 657

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            + +YPES         +G+ Y     D           ++    +V +Y  S   + A 
Sbjct: 658 LLGKYPESPVSRKAAAEIGLLYY-QNDDYDR-------AIEAYKHVVTQYPGSEEARLAM 709

Query: 180 FYVTVG 185
             +   
Sbjct: 710 RDLKSI 715



 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 68/226 (30%), Gaps = 50/226 (22%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM-------SAFVQYSAGK--- 109
            Y    +   ++++S A   F                 L         A      G    
Sbjct: 524 YYNLGYIAFHQKDYSTAENRFRNF------------VQLEKGENPTALADAYNRIGDCNL 571

Query: 110 ----YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               + +A     +  +    +   DY YY + +                   +  + R+
Sbjct: 572 HVRRFDEAKQYYTKAESL--GTPAGDYSYYQLALVAGLQKDYSGK--------VTLLDRL 621

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
             +Y NSPY            N L  K    GR Y++      AI  F+ +L  Y ++  
Sbjct: 622 AVKYPNSPYA----------INALYEK----GRSYVQSNNSPQAIAAFRELLGKYPESPV 667

Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           + +A A +   Y      D A E    +  +YP    AR     +K
Sbjct: 668 SRKAAAEIGLLYYQNDDYDRAIEAYKHVVTQYPGSEEARLAMRDLK 713



 Score = 43.6 bits (102), Expect = 0.029,   Method: Composition-based stats.
 Identities = 40/309 (12%), Positives = 87/309 (28%), Gaps = 68/309 (22%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           +K +  +  ++    L+   + S +             + +Y++     +++ ++ A   
Sbjct: 3   HKISRILCTALCCAPLLASAQTSEKST---------SPKRLYQEGQTLFQQKAYAAAISP 53

Query: 80  FNQCSRD-------FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
                R         P  G  +++  M     Y      ++  L   ++ +YP++ + + 
Sbjct: 54  LQAYVRQMNADGKPLPDTGERQEAEYMLVCAAYELRD-PKSIDLLRAFLDEYPDTPHANR 112

Query: 133 VYYLVGMSYA---------QMIRDVPYDQRATKLMLQYMSRIVERYTNS----------- 172
           +Y L+  SY           M      D   T+       R+   Y  +           
Sbjct: 113 IYALIASSYFFEGNYDDALAMFNSARLDLLGTEERDDMTYRLATCYLKTGNVKEAAIWFE 172

Query: 173 -------PYVKGARFYVTVGRNQLAAKE--------------------VEIGRYYLKRGE 205
                   Y     +Y++  R      +                      I   YL + +
Sbjct: 173 TLRSTSRKYAADCAYYISYIRYTQGRYDEALSGFLPLQDNAKYKNLVPYYIAEIYLLKKQ 232

Query: 206 YVAAIPRFQLVLANYSD---AEHAEEAMARLVEAYVALALMDEA-REVVSLIQERYPQGY 261
           Y  A    Q  L+ + D     H  E    L  A        EA +     ++       
Sbjct: 233 YDKAEIVAQNALSAHPDGLSYTHTAELNRILGTAEYHFGKYHEAIKSFEQYLEHNAESAT 292

Query: 262 WARYVETLV 270
             R    ++
Sbjct: 293 HRRDALYML 301



 Score = 40.9 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 38/271 (14%), Positives = 85/271 (31%), Gaps = 74/271 (27%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL--LMSAFVQ 104
           Y +S    +   E+    +L+ +  ++ +A E +      +P +  AR ++  L S +V 
Sbjct: 662 YPESPVSRKAAAEI---GLLYYQNDDYDRAIEAYKHVVTQYPGSEEARLAMRDLKSIYVD 718

Query: 105 ------------------------------------YSAGKYQQAASLGEEYITQYPESK 128
                                               Y  G+   A      Y+  YP   
Sbjct: 719 ANRVDEFAALAAQMPGEIRFEPSEQDSLTYIAAEKVYMKGEAAPAKESFTRYLQSYPGGA 778

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
                +Y + +        +  +Q+  + +L++  +++E Y ++PY + A          
Sbjct: 779 FSLNAHYYLCV--------IGKEQKDDEAVLEHAGKLLE-YPDNPYSEEALLMHGEILFN 829

Query: 189 LAAKEVEIGRYY-LKRGEYVA----------------------AIPRFQLVLANYSDAEH 225
               ++ +  Y  L+     A                       I     +LA    +  
Sbjct: 830 RQQYDLALADYKKLQAKATTAERRQLGAIGVLRCGALMHDDAEVINAATALLAEAKLSPE 889

Query: 226 AE-EAMARLVEAYVALALMDEAREVVSLIQE 255
              EA+    +AY+      +A + + L+ +
Sbjct: 890 LRNEALYYRAKAYLNQKADKKAMDDLQLLAK 920



 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 72/214 (33%), Gaps = 19/214 (8%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFA-GVARKSLLM--SAFVQYSAGKYQQAASLG 117
           Y  A ++L ++ + KA           P        + L       +Y  GKY +A    
Sbjct: 221 YYIAEIYLLKKQYDKAEIVAQNALSAHPDGLSYTHTAELNRILGTAEYHFGKYHEAIKSF 280

Query: 118 EEYITQYPESK-NVDYVYYLVGMSYAQ-----MIRDVPYDQRATKLMLQYMSRIVERYTN 171
           E+Y+    ES  +     Y++GMSY Q      +  +  +       L   + +      
Sbjct: 281 EQYLEHNAESATHRRDALYMLGMSYYQCGVYSQVPAILGEVTTENDALSQNAYLHMGLAY 340

Query: 172 SPYVKGARFYVTVGR----------NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
                  +  +   +           + AA    +  +      +  ++  F+  L  + 
Sbjct: 341 LQLADKTKARMAFEQAAASNADPKIKEQAAYNYALCIHETSYSAFGESVTVFEKFLNEFP 400

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           ++ +AE+    LVE Y+     D A + +  I  
Sbjct: 401 NSPYAEKVSNYLVEVYMNTRSYDAALKSIDRISH 434



 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 30/236 (12%), Positives = 74/236 (31%), Gaps = 40/236 (16%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAAS 115
           +++          F +A  YFNQ            ++   + +      Y   + ++AA 
Sbjct: 447 LFQLGTQSFANTQFEQAIGYFNQSVTL---GQYNLQTKADALYWLGESYYRLNRMREAAR 503

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQM--IRDVPYDQRATKLMLQYMSRIVERYTNSP 173
              EY++     ++ +    +  ++Y  +  I     D    +   +   ++ +    +P
Sbjct: 504 NFNEYLSL-TRQRDTE----MFALAYYNLGYIAFHQKDYSTAENRFRNFVQLEKG--ENP 556

Query: 174 YV-KGARFYVTVGRNQLAAKEVEIGRYYLK----------------------RGEYVAAI 210
                A   +      +   + E  +YY K                      + +Y   +
Sbjct: 557 TALADAYNRIGDCNLHVRRFD-EAKQYYTKAESLGTPAGDYSYYQLALVAGLQKDYSGKV 615

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
                +   Y ++ +A  A+     +YV      +A      +  +YP+   +R  
Sbjct: 616 TLLDRLAVKYPNSPYAINALYEKGRSYVQSNNSPQAIAAFRELLGKYPESPVSRKA 671


>gi|160891540|ref|ZP_02072543.1| hypothetical protein BACUNI_03992 [Bacteroides uniformis ATCC 8492]
 gi|156858947|gb|EDO52378.1| hypothetical protein BACUNI_03992 [Bacteroides uniformis ATCC 8492]
          Length = 1014

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 33/73 (45%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
             +YEK   +++  N  +A   F +    +P + V+RK+      + Y    Y +A    
Sbjct: 633 NALYEKGRSYVQSNNSPQAIAAFRELLGKYPESPVSRKAAAEIGLLYYQNDDYDRAIEAY 692

Query: 118 EEYITQYPESKNV 130
           +  +TQYP S+  
Sbjct: 693 KHVVTQYPGSEEA 705



 Score = 52.0 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 45/126 (35%), Gaps = 8/126 (6%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            Y+ A++   ++++S      ++ +  +P +  A  +L         +    QA +   E
Sbjct: 598 YYQLALVAGLQKDYSGKVTLLDRLAVKYPNSPYAINALYEKGRSYVQSNNSPQAIAAFRE 657

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            + +YPES         +G+ Y     D           ++    +V +Y  S   + A 
Sbjct: 658 LLGKYPESPVSRKAAAEIGLLYY-QNDDYDR-------AIEAYKHVVTQYPGSEEARLAM 709

Query: 180 FYVTVG 185
             +   
Sbjct: 710 RDLKSI 715



 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 68/226 (30%), Gaps = 50/226 (22%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM-------SAFVQYSAGK--- 109
            Y    +   ++++S A   F                 L         A      G    
Sbjct: 524 YYNLGYIAFHQKDYSTAENRFRNF------------VQLEKGENPTALADAYNRIGDCNL 571

Query: 110 ----YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               + +A     +  +    +   DY YY + +                   +  + R+
Sbjct: 572 HVRRFDEAKQYYTKAESL--GTPAGDYSYYQLALVAGLQKDYSGK--------VTLLDRL 621

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
             +Y NSPY            N L  K    GR Y++      AI  F+ +L  Y ++  
Sbjct: 622 AVKYPNSPYA----------INALYEK----GRSYVQSNNSPQAIAAFRELLGKYPESPV 667

Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           + +A A +   Y      D A E    +  +YP    AR     +K
Sbjct: 668 SRKAAAEIGLLYYQNDDYDRAIEAYKHVVTQYPGSEEARLAMRDLK 713



 Score = 40.9 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 38/271 (14%), Positives = 85/271 (31%), Gaps = 74/271 (27%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL--LMSAFVQ 104
           Y +S    +   E+    +L+ +  ++ +A E +      +P +  AR ++  L S +V 
Sbjct: 662 YPESPVSRKAAAEI---GLLYYQNDDYDRAIEAYKHVVTQYPGSEEARLAMRDLKSIYVD 718

Query: 105 ------------------------------------YSAGKYQQAASLGEEYITQYPESK 128
                                               Y  G+   A      Y+  YP   
Sbjct: 719 ANRVDEFAALAAQMPGEIRFEPSEQDSLTYIAAEKVYMKGEAAPAKESFTRYLQSYPGGA 778

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
                +Y + +        +  +Q+  + +L++  +++E Y ++PY + A          
Sbjct: 779 FSLNAHYYLCV--------IGKEQKDDEAVLEHAGKLLE-YPDNPYSEEALLMHGEILFN 829

Query: 189 LAAKEVEIGRYY-LKRGEYVA----------------------AIPRFQLVLANYSDAEH 225
               ++ +  Y  L+     A                       I     +LA    +  
Sbjct: 830 RQQYDLALADYKKLQAKATTAERRQLGAIGVLRCGALMHDDAEVINAATALLAEAKLSPE 889

Query: 226 AE-EAMARLVEAYVALALMDEAREVVSLIQE 255
              EA+    +AY+      +A + + L+ +
Sbjct: 890 LRNEALYYRAKAYLNQKADKKAMDDLQLLAK 920



 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 72/214 (33%), Gaps = 19/214 (8%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFA-GVARKSLLM--SAFVQYSAGKYQQAASLG 117
           Y  A ++L ++ + KA           P        + L       +Y  GKY +A    
Sbjct: 221 YYIAEIYLLKKQYDKAEIVAQNALSAHPDGLSYTHTAELNRILGTAEYHFGKYHEAIKSF 280

Query: 118 EEYITQYPESK-NVDYVYYLVGMSYAQ-----MIRDVPYDQRATKLMLQYMSRIVERYTN 171
           E+Y+    ES  +     Y++GMSY Q      +  +  +       L   + +      
Sbjct: 281 EQYLEHNAESATHRRDALYMLGMSYYQCGVYSQVPAILGEVTTENDALSQNAYLHMGLAY 340

Query: 172 SPYVKGARFYVTVGR----------NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
                  +  +   +           + AA    +  +      +  ++  F+  L  + 
Sbjct: 341 LQLADKTKARMAFEQAAASNADPKIKEQAAYNYALCIHETSYSAFGESVTVFEKFLNEFP 400

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           ++ +AE+    LVE Y+     D A + +  I  
Sbjct: 401 NSPYAEKVSNYLVEVYMNTRSYDAALKSIDRISH 434



 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 30/236 (12%), Positives = 74/236 (31%), Gaps = 40/236 (16%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAAS 115
           +++          F +A  YFNQ            ++   + +      Y   + ++AA 
Sbjct: 447 LFQLGTQSFANTQFEQAIGYFNQSVTL---GQYNLQTKADALYWLGESYYRLNRMREAAR 503

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQM--IRDVPYDQRATKLMLQYMSRIVERYTNSP 173
              EY++     ++ +    +  ++Y  +  I     D    +   +   ++ +    +P
Sbjct: 504 NFNEYLSL-TRQRDTE----MFALAYYNLGYIAFHQKDYSTAENRFRNFVQLEKG--ENP 556

Query: 174 YV-KGARFYVTVGRNQLAAKEVEIGRYYLK----------------------RGEYVAAI 210
                A   +      +   + E  +YY K                      + +Y   +
Sbjct: 557 TALADAYNRIGDCNLHVRRFD-EAKQYYTKAESLGTPAGDYSYYQLALVAGLQKDYSGKV 615

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
                +   Y ++ +A  A+     +YV      +A      +  +YP+   +R  
Sbjct: 616 TLLDRLAVKYPNSPYAINALYEKGRSYVQSNNSPQAIAAFRELLGKYPESPVSRKA 671



 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 48/309 (15%), Positives = 91/309 (29%), Gaps = 51/309 (16%)

Query: 1   MSAVLGRAICIFEAWA-----------YQLYKFALTIF----FSIAVCFLVGWERQSSRD 45
           +S +L  A+C     A            +LYK   T+F    ++ A+  L  +  Q + D
Sbjct: 5   ISRILCTALCCAPLLASAQTSEKSTSPKRLYKEGQTLFQQKAYAAAISPLQAYVHQMNAD 64

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
                 T  R + E Y       + ++     +       ++P    A +   + A   +
Sbjct: 65  GKPLPATGERQEAE-YMLVCAAYELRDPKS-IDLLRAFLDEYPDTPHANRIYALIASSYF 122

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
             G Y  A ++          ++  D + Y +   Y +            K    +   +
Sbjct: 123 FEGNYDDALAMFNSARLDLLGTEERDDMTYRLATCYLKT--------GNVKEAAIWFETL 174

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKE--------------------VEIGRYYLKRGE 205
             R T+  Y     +Y++  R      +                      I   YL + +
Sbjct: 175 --RSTSRKYAADCAYYISYIRYTQGRYDEALSGFLPLQDNAKYKNLVPYYIAEIYLLKKQ 232

Query: 206 YVAAIPRFQLVLANYSD---AEHAEEAMARLVEAYVALALMDEA-REVVSLIQERYPQGY 261
           Y  A    Q  L+ + D     H  E    L  A        EA +     ++       
Sbjct: 233 YDKAEIVAQNALSAHPDGLSYTHTAELNRILGTAEYHFGKYHEAIKSFEQYLEHNAESAT 292

Query: 262 WARYVETLV 270
             R    ++
Sbjct: 293 HRRDALYML 301


>gi|77460621|ref|YP_350128.1| hypothetical protein Pfl01_4400 [Pseudomonas fluorescens Pf0-1]
 gi|77384624|gb|ABA76137.1| putative exported protein [Pseudomonas fluorescens Pf0-1]
          Length = 279

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 47/131 (35%), Gaps = 8/131 (6%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D   ++  Y+ A   +K ++F KA + F    R +P +  A  +      V  + G 
Sbjct: 152 EPADPAKEKLYYDAAFDLIKAKDFDKASQAFAAFLRKYPNSQYAGNAQYWLGEVNLAKGD 211

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            Q A     +    YP+   V    Y +         DV      T  +   + ++V +Y
Sbjct: 212 LQGAGQAFAKVSQLYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 263

Query: 170 TNSPYVKGARF 180
             +   + A+ 
Sbjct: 264 PGTSAAQLAQR 274



 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
             +I+   +D        Q  +  + +Y NS Y   A++++      LA  +++      
Sbjct: 167 FDLIKAKDFD-----KASQAFAAFLRKYPNSQYAGNAQYWLGEVN--LAKGDLQ------ 213

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
                  A   F  V   Y       +++ +L +    L   D+ + ++  +  +YP   
Sbjct: 214 ------GAGQAFAKVSQLYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 267

Query: 262 WARYVETLVK 271
            A+  +  ++
Sbjct: 268 AAQLAQRDLQ 277


>gi|148546496|ref|YP_001266598.1| Tol-Pal system, YbgF [Pseudomonas putida F1]
 gi|148510554|gb|ABQ77414.1| Tol-Pal system, YbgF [Pseudomonas putida F1]
          Length = 268

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 52/136 (38%), Gaps = 8/136 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D   ++  Y+ A   +K+++F KA + F+   R +P +  A  +      V  + G 
Sbjct: 141 QPGDPAKEKLYYDAAFDLIKQKDFDKASQAFSAFLRKYPNSQYAGNAQYWLGEVNLAKGD 200

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            Q A+    +   +YP+   V    Y +         DV      T  +   + ++V +Y
Sbjct: 201 LQGASQAFAQVSQKYPKHSKVPDSLYKLA--------DVERRMGHTDKVKGILQQVVTQY 252

Query: 170 TNSPYVKGARFYVTVG 185
             +   + A+  +   
Sbjct: 253 PGTSAAQLAQRDLQKL 268



 Score = 54.4 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 45/120 (37%), Gaps = 14/120 (11%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           Q+      Q  S  + +Y NS Y   A++++      LA  +++             A  
Sbjct: 161 QKDFDKASQAFSAFLRKYPNSQYAGNAQYWLGEVN--LAKGDLQ------------GASQ 206

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
            F  V   Y       +++ +L +    +   D+ + ++  +  +YP    A+  +  ++
Sbjct: 207 AFAQVSQKYPKHSKVPDSLYKLADVERRMGHTDKVKGILQQVVTQYPGTSAAQLAQRDLQ 266


>gi|225872179|ref|YP_002753634.1| transporter auxiliary protein, TonB-ExbB-ExbD/TolA-TolQ-TolR (TonB)
           family [Acidobacterium capsulatum ATCC 51196]
 gi|225794587|gb|ACO34677.1| transporter auxiliary protein, TonB-ExbB-ExbD/TolA-TolQ-TolR (TonB)
           family [Acidobacterium capsulatum ATCC 51196]
          Length = 314

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 41/141 (29%), Gaps = 22/141 (15%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
                 +++Y+ A+   +   +  A   F    +D+P   ++  +        Y   KY 
Sbjct: 175 PAFPPIKQLYQVALSDYEGGRYKLAASEFGDVVKDYPLDELSGSAQFYIGESNYRLHKYH 234

Query: 112 QAASLGEEYITQYPESKNVD-------YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
            A    E  +  +  +           Y      ++  +    V             +  
Sbjct: 235 DAIKAYENVLQNFAGNSKAPASRLHKAYAE----LALGERESGV-----------HDLKA 279

Query: 165 IVERYTNSPYVKGARFYVTVG 185
           ++ RY  +P    AR  +   
Sbjct: 280 LIARYPQTPEASQARVRLHGL 300



 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 46/130 (35%), Gaps = 26/130 (20%)

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
            Y V +S  +  R         KL       +V+ Y        A+              
Sbjct: 183 LYQVALSDYEGGR--------YKLAASEFGDVVKDYPLDELSGSAQ-------------- 220

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV--VS 251
             IG    +  +Y  AI  ++ VL N++    A  +  RL +AY  LAL +    V  + 
Sbjct: 221 FYIGESNYRLHKYHDAIKAYENVLQNFAGNSKAPAS--RLHKAYAELALGERESGVHDLK 278

Query: 252 LIQERYPQGY 261
            +  RYPQ  
Sbjct: 279 ALIARYPQTP 288



 Score = 38.6 bits (89), Expect = 0.92,   Method: Composition-based stats.
 Identities = 14/89 (15%), Positives = 30/89 (33%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           DV  D   D       +       +   +  A + +    ++F     A  S L  A+ +
Sbjct: 205 DVVKDYPLDELSGSAQFYIGESNYRLHKYHDAIKAYENVLQNFAGNSKAPASRLHKAYAE 264

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYV 133
            + G+ +      +  I +YP++      
Sbjct: 265 LALGERESGVHDLKALIARYPQTPEASQA 293



 Score = 36.6 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 20/145 (13%), Positives = 50/145 (34%), Gaps = 24/145 (16%)

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
           F  + +   +  +   Y  G+Y+ AAS   + +  YP  +      + +G S  ++ +  
Sbjct: 177 FPPIKQLYQVALSD--YEGGRYKLAASEFGDVVKDYPLDELSGSAQFYIGESNYRLHK-- 232

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
                     ++    +++ +  +     +R +       L  +E              +
Sbjct: 233 ------YHDAIKAYENVLQNFAGNSKAPASRLHKAYAELALGERE--------------S 272

Query: 209 AIPRFQLVLANYSDAEHAEEAMARL 233
            +   + ++A Y     A +A  RL
Sbjct: 273 GVHDLKALIARYPQTPEASQARVRL 297


>gi|87307368|ref|ZP_01089513.1| hypothetical protein DSM3645_17635 [Blastopirellula marina DSM
           3645]
 gi|87290108|gb|EAQ81997.1| hypothetical protein DSM3645_17635 [Blastopirellula marina DSM
           3645]
          Length = 1065

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 74/230 (32%), Gaps = 38/230 (16%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY---SAGKYQQAASLGE 118
             AV  LK   ++ A   F    ++ P + +   +LL      Y    +G  +   S  +
Sbjct: 75  NLAVCQLKLDKYADAAGNFYAILKNNPKSELREDALLNLGSTYYSWAKSGSPKMFDSAAK 134

Query: 119 EYITQY---PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY- 174
            +   Y   P+ KN D   Y  G S+         DQ+     L     +VE++T SPY 
Sbjct: 135 TFEQLYKEYPQGKNADQALYFAGESFYLS------DQKD--RSLGPYKALVEQFTQSPYR 186

Query: 175 -------------------VKGARFYVTVG---RNQLAAKEVEIGRYYLKRGEYVAAIPR 212
                                             +  A   +      L + ++  A   
Sbjct: 187 ADGAYAWGVTLEELNKPTEAADVYSKFLAAFPDHDLAAEVRMRQAETVLNQNDFAKAEQM 246

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
              V A+       + A+ RL  A +    + +A  + + I   YP+  +
Sbjct: 247 LTTVTAD-PQFPLIDHALYRLAFARLKQEKLADAGAIYAQIAADYPKSKY 295



 Score = 53.6 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 64/200 (32%), Gaps = 16/200 (8%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y  AV F K + +  A E +++  +      +A K+    A  Q    KY  AA     
Sbjct: 36  IYSDAVAFQKAEEYGLAAEEWSKFLKRHGDDPLAEKARNNLAVCQLKLDKYADAAGNFYA 95

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +   P+S+  +     +G +Y    +      +      +   ++ + Y        A 
Sbjct: 96  ILKNNPKSELREDALLNLGSTYYSWAKSGS--PKMFDSAAKTFEQLYKEYPQGKNADQAL 153

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                            G  +    +   ++  ++ ++  ++ + +  +           
Sbjct: 154 --------------YFAGESFYLSDQKDRSLGPYKALVEQFTQSPYRADGAYAWGVTLEE 199

Query: 240 LALMDEAREVVSLIQERYPQ 259
           L    EA +V S     +P 
Sbjct: 200 LNKPTEAADVYSKFLAAFPD 219



 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 80/224 (35%), Gaps = 55/224 (24%)

Query: 53   DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
            D   ++  Y+      ++++++ A + F   +  +P   +A  +  M     Y   ++  
Sbjct: 810  DDVGEKSAYKLGWAQYQQRDYAAASDAFAVQTSKYPNGPLAADASFMRGECLYKKDQFAD 869

Query: 113  AASLG-----EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY---DQRATK-----LML 159
            A S       +                    +S +  +RD+      Q A +       +
Sbjct: 870  ALSAYGQVKSDR-------------------LS-SNDMRDLWRLHAGQSAAQLKKWDESI 909

Query: 160  QYMSRIVERYTNSPYVKGARFYV-----------TVGRNQLAAKEVE-----------IG 197
            ++M+ ++ +  +SP    A++ +              +  LAA ++            +G
Sbjct: 910  RWMNELLTQSPDSPVAAEAQYELGWANYNQKKTDEAIQRFLAAADLSPGKTGARARFMLG 969

Query: 198  RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
              Y ++ +Y AA  +F+ V+  +  A+  +E      +A   L 
Sbjct: 970  ELYFEKKDYEAAEGQFKRVVLGFGGAKSLDEVKPWQAKAAYELG 1013



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 39/97 (40%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           + V     +       +Y      +++Q   +A + F+Q         +A +SL   A  
Sbjct: 616 QTVVDKFASSSLAPHALYGLGWSHIQQQQGKEARDAFSQLLTKHNDHQLAPQSLHARAVA 675

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
           +  +  +  AAS  + Y+ + P++ +     YL G+ 
Sbjct: 676 RRLSNDFAGAASDVDAYLKKSPQAADKADALYLKGLC 712



 Score = 39.3 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 31/85 (36%), Gaps = 6/85 (7%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
           +     +Y++           ++   + Q     P    A ++L   AF       +  A
Sbjct: 373 IDQADALYDQPQRR------GESVRLYQQIVTQHPKDPQAPQALYNGAFAALETQDHAAA 426

Query: 114 ASLGEEYITQYPESKNVDYVYYLVG 138
           A L + ++ Q+P+ + +    Y+  
Sbjct: 427 ARLAKTFVNQFPQHELLLDAKYVAA 451



 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 44/110 (40%), Gaps = 14/110 (12%)

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
           ++    ++Q      +  + ++ ++  NSP    A + +              G YY   
Sbjct: 560 LLSRAQHEQGDDTAAIATVRKMQKQLPNSPLADHAAYRL--------------GEYYYAA 605

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           G++  A   +Q V+  ++ +  A  A+  L  +++      EAR+  S +
Sbjct: 606 GDFAKAAAEYQTVVDKFASSSLAPHALYGLGWSHIQQQQGKEARDAFSQL 655



 Score = 35.1 bits (80), Expect = 9.7,   Method: Composition-based stats.
 Identities = 19/171 (11%), Positives = 53/171 (30%), Gaps = 28/171 (16%)

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           A     A +Y  AA    +++ ++ +    +     + +   ++ +              
Sbjct: 40  AVAFQKAEEYGLAAEEWSKFLKRHGDDPLAEKARNNLAVCQLKLDKYAD--------AAG 91

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK------RGEYVAAIPRFQ 214
               I++    S   + A               + +G  Y           + +A   F+
Sbjct: 92  NFYAILKNNPKSELREDAL--------------LNLGSTYYSWAKSGSPKMFDSAAKTFE 137

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
            +   Y   ++A++A+    E++      D +      + E++ Q  +   
Sbjct: 138 QLYKEYPQGKNADQALYFAGESFYLSDQKDRSLGPYKALVEQFTQSPYRAD 188


>gi|312115988|ref|YP_004013584.1| tol-pal system protein YbgF [Rhodomicrobium vannielii ATCC 17100]
 gi|311221117|gb|ADP72485.1| tol-pal system protein YbgF [Rhodomicrobium vannielii ATCC 17100]
          Length = 308

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 44/134 (32%), Gaps = 14/134 (10%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           D    ++      R ++E+    L  + +S A  YF Q    +P   VA  +        
Sbjct: 171 DATPAALPASGGARALFEQGTGALNRREYSAAETYFQQVVDQYPSDPVAGPAYYWLGETA 230

Query: 105 YSAGKYQQAASLGEEYITQ---YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           + +G+Y    +  + ++     YP ++        + +S  ++                 
Sbjct: 231 FVSGEY---RTAADRFLKTFTAYPNTERAPEALLKLAISLRRLGEKA--------AACDS 279

Query: 162 MSRIVERYTNSPYV 175
            + +  RY   P  
Sbjct: 280 FAELQRRYPQGPKA 293



 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 43/110 (39%), Gaps = 14/110 (12%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           +R       Y  ++V++Y + P    A +++              G      GEY  A  
Sbjct: 196 RREYSAAETYFQQVVDQYPSDPVAGPAYYWL--------------GETAFVSGEYRTAAD 241

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           RF      Y + E A EA+ +L  +   L     A +  + +Q RYPQG 
Sbjct: 242 RFLKTFTAYPNTERAPEALLKLAISLRRLGEKAAACDSFAELQRRYPQGP 291


>gi|304312646|ref|YP_003812244.1| hypothetical protein HDN1F_30200 [gamma proteobacterium HdN1]
 gi|301798379|emb|CBL46603.1| Hypothetical protein HDN1F_30200 [gamma proteobacterium HdN1]
          Length = 1047

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 60/169 (35%), Gaps = 24/169 (14%)

Query: 65  VLFLKEQ-NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              L+   N+++A + +    R+ P       +  + A       + ++A +  +    +
Sbjct: 144 KESLESGANYARAIQLYEDQIRNAPEGTDLSDTWYLLAKAYDLNAEPEKALAALDTMAER 203

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
           YP S  +D V +  G  Y  M              L    ++++      Y + A +   
Sbjct: 204 YPNSPLMDEVQFRRGEQYFVM--------GNNDKALAAYKQVLKAGPEGKYYENALYKYG 255

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY-SDAEHAEEAMA 231
                             ++GEY AA+  F  +L  Y  +AE  E+ MA
Sbjct: 256 WSL--------------YRQGEYEAALTPFITLLDRYLPNAETVEQQMA 290



 Score = 42.8 bits (100), Expect = 0.057,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 36/79 (45%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
             R    +Y++A +   E   ++A   + + +   P + V  K+   +A +    G Y+Q
Sbjct: 695 QERRATAIYKQAEMLEHEGMKAEAARQYQKVASVEPNSEVRIKADYDAANLLMETGDYEQ 754

Query: 113 AASLGEEYITQYPESKNVD 131
           A  + EE+  ++P+ +   
Sbjct: 755 AVRVLEEFQRKFPKHELAA 773



 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 26/71 (36%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A L ++  ++ +A     +  R FP   +A       +      G    AA   E+ 
Sbjct: 740 YDAANLLMETGDYEQAVRVLEEFQRKFPKHELAATVPAKLSVAYQKLGNIDGAAHALEQV 799

Query: 121 ITQYPESKNVD 131
            T   ++  + 
Sbjct: 800 ATLNADNPELA 810



 Score = 38.9 bits (90), Expect = 0.77,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 41/131 (31%), Gaps = 9/131 (6%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
            D   ++          Y  A  +       KA    +  +  +P + +  +        
Sbjct: 161 EDQIRNAPEGTDLSDTWYLLAKAYDLNAEPEKALAALDTMAERYPNSPLMDEVQFRRGEQ 220

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
            +  G   +A +  ++ +   PE K  +   Y  G S  +        Q   +  L    
Sbjct: 221 YFVMGNNDKALAAYKQVLKAGPEGKYYENALYKYGWSLYR--------QGEYEAALTPFI 272

Query: 164 RIVERY-TNSP 173
            +++RY  N+ 
Sbjct: 273 TLLDRYLPNAE 283


>gi|296127379|ref|YP_003634631.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
 gi|296019195|gb|ADG72432.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
          Length = 346

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 43/126 (34%), Gaps = 9/126 (7%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A     E N+ K+  Y+ + +  FP    A ++L   A   Y+   Y +A       +  
Sbjct: 226 AHKTFVEGNYVKSRMYYTKIAELFPRTEYAEEALFRIAQSYYNEKNYNRAIDYYNR-VRL 284

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
                        +G+SY ++ R             + +   V  Y  +P    AR Y+ 
Sbjct: 285 NNVYTLDAEALLYIGLSYFKVGRYSD--------SYKALDNFVSEYPANPNASRAREYMQ 336

Query: 184 VGRNQL 189
             +  L
Sbjct: 337 ALQETL 342



 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 40/90 (44%), Gaps = 2/90 (2%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                 +  ++  A  +  E+N+++A +Y+N+   +  +   A  +LL      +  G+Y
Sbjct: 250 PRTEYAEEALFRIAQSYYNEKNYNRAIDYYNRVRLNNVYTLDAE-ALLYIGLSYFKVGRY 308

Query: 111 QQAASLGEEYITQYPESKNVDYV-YYLVGM 139
             +    + ++++YP + N      Y+  +
Sbjct: 309 SDSYKALDNFVSEYPANPNASRAREYMQAL 338



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 70/213 (32%), Gaps = 34/213 (15%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
                 ++ + +A  YF +             ++L  A V ++  +Y +A    E+++  
Sbjct: 153 GYQLFLQKKYGEALSYFLRAD--------GELAVLGRARVYFNMNEYDRAFETYEDFLKY 204

Query: 124 YPESKNVDYVY--YLV---GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
              S   D V   YL+    M++   +               Y ++I E +  + Y + A
Sbjct: 205 NKTSIYYDEVVRTYLIQVPAMAHKTFVEG------NYVKSRMYYTKIAELFPRTEYAEEA 258

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
            F               I + Y     Y  AI  +  V  N      A EA+  +  +Y 
Sbjct: 259 LFR--------------IAQSYYNEKNYNRAIDYYNRVRLNNVYTLDA-EALLYIGLSYF 303

Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
            +    ++ + +      YP    A      ++
Sbjct: 304 KVGRYSDSYKALDNFVSEYPANPNASRAREYMQ 336


>gi|330959273|gb|EGH59533.1| tol-pal system protein YbgF [Pseudomonas syringae pv. maculicola
           str. ES4326]
          Length = 207

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 8/136 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D   ++  YE A   +K ++F KA + F    R +P +  A  +      V  + G 
Sbjct: 80  EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 139

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            Q A     +   QYP+   V    Y +         DV      T  +   + ++V +Y
Sbjct: 140 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 191

Query: 170 TNSPYVKGARFYVTVG 185
             +   + A+  +   
Sbjct: 192 PGTSAAQLAQRDLQRL 207



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 44/119 (36%), Gaps = 14/119 (11%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           +      Q  +  + +Y NS Y   A++++      LA  +++             A   
Sbjct: 101 KDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------------GAGQA 146

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           F  V   Y       +++ +L +    L   D+ + ++  +  +YP    A+  +  ++
Sbjct: 147 FAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTSAAQLAQRDLQ 205


>gi|254412800|ref|ZP_05026573.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
 gi|196180535|gb|EDX75526.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
          Length = 595

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 66/206 (32%), Gaps = 35/206 (16%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
            D    +E +E+ V  LK  N   A E F++  +  P   +   +           G +Q
Sbjct: 200 PDRIKAQEFFEQGVEHLKSGNVQGAIEAFDESIQLNPNNPL---AYGNRGIAYDDLGAHQ 256

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            A     + I   P + +    YY  G++          D    +  ++  + +++R +N
Sbjct: 257 AAVEDYTKLIELAPSNTD---AYYQRGLARY--------DLEDWQGAVEDFTELIQRKSN 305

Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
                          +  A     I  Y  +  +Y AAI      +        A  A  
Sbjct: 306 ---------------DDQAYYHRGIANY--QLNQYKAAIADLDQAIQLNPQNAQAYAARG 348

Query: 232 RLVEAYVALALMDEA-REVVSLIQER 256
            ++ A   +    EA  +    I+  
Sbjct: 349 LVLSA---MGNQQEAMADYTQAIEYN 371


>gi|224025229|ref|ZP_03643595.1| hypothetical protein BACCOPRO_01963 [Bacteroides coprophilus DSM
           18228]
 gi|224018465|gb|EEF76463.1| hypothetical protein BACCOPRO_01963 [Bacteroides coprophilus DSM
           18228]
          Length = 1004

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 71/216 (32%), Gaps = 57/216 (26%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
            +       +YE+   F+  ++ S A   ++   + +P + ++RK+      + Y   +Y
Sbjct: 613 PSSQYLDDALYEQGRAFVLMEDHSNAINRYSLLVQRYPESPLSRKAANEIGLLYYQTDQY 672

Query: 111 QQAASLGEEYITQYPESKNV------------------DYVYYLVGMSYAQMIRD----- 147
            +A +  ++ IT YP S+                    DY      M++A  I       
Sbjct: 673 DKAIAAYKKVITAYPGSEEARLAQRDLKSIYIDLNKVDDY------MAFASQIPGGANFD 726

Query: 148 -VPYD------------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
               D            +           R ++ +    +   A +Y+ V          
Sbjct: 727 VNERDSLTYVAAERVYMRGEIAEAKNSFVRYLQSFPQGAFSVNASYYLGVIA-------- 778

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
                   + +Y +A      VL  Y D++ + EAM
Sbjct: 779 ------YNQQDYASASSWLDKVLE-YPDSKFSTEAM 807



 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 43/191 (22%), Positives = 68/191 (35%), Gaps = 28/191 (14%)

Query: 70  EQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
            + F +A   + Q     P F   +   L   AFV+     Y        + +T YP S+
Sbjct: 560 ARRFDEARSLYAQAVAYDPSFGDYS---LFQEAFVKGLQRDYAGKIGTLNQLLTAYPSSQ 616

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
            +D   Y  G ++  M              +   S +V+RY  SP  + A          
Sbjct: 617 YLDDALYEQGRAFVLMEDHSN--------AINRYSLLVQRYPESPLSRKAAN-------- 660

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
                 EIG  Y +  +Y  AI  ++ V+  Y  +E A  A   L   Y+ L  +D+   
Sbjct: 661 ------EIGLLYYQTDQYDKAIAAYKKVITAYPGSEEARLAQRDLKSIYIDLNKVDDYMA 714

Query: 249 VVSLI--QERY 257
             S I     +
Sbjct: 715 FASQIPGGANF 725



 Score = 52.4 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 76/224 (33%), Gaps = 46/224 (20%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQ----CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           +Y       K++ ++KA  +F +     +       VA  +        + A ++ +A S
Sbjct: 511 LYNLGYCAFKQKQYNKALNWFERCVPLVASR--ERTVAADASNRIGDCYFYARRFDEARS 568

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ--------YMSRIVE 167
                              Y   ++Y     D    Q A    LQ         +++++ 
Sbjct: 569 ------------------LYAQAVAYDPSFGDYSLFQEAFVKGLQRDYAGKIGTLNQLLT 610

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y +S Y+  A                E GR ++   ++  AI R+ L++  Y ++  + 
Sbjct: 611 AYPSSQYLDDAL--------------YEQGRAFVLMEDHSNAINRYSLLVQRYPESPLSR 656

Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           +A   +   Y      D+A      +   YP    AR  +  +K
Sbjct: 657 KAANEIGLLYYQTDQYDKAIAAYKKVITAYPGSEEARLAQRDLK 700



 Score = 42.8 bits (100), Expect = 0.048,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 58/152 (38%), Gaps = 25/152 (16%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM-IRDVPYDQRATKLMLQYMS 163
           +    Y  A    + Y+ Q  E+  +D   Y++  +  ++ + D           ++ +S
Sbjct: 42  FLRQDYAAARQTLDRYVRQNGETDLLDEAAYMLACTSYELKMPDC----------IEALS 91

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
             +E Y  S Y       +             I   +  +G+Y+ +I  F+    +    
Sbjct: 92  AYLEAYPESRYAN----RMQSL----------IASAWFFKGKYLESIATFKGCDIDMLSE 137

Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           E  +E   RL  AY+ +  ++EA    S+++ 
Sbjct: 138 EERDECTMRLGTAYMKIGNLEEAGIWFSVLKA 169



 Score = 42.0 bits (98), Expect = 0.083,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 59/201 (29%), Gaps = 54/201 (26%)

Query: 45  DVYLDSVTDVRYQREVYE-KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR--KSLLMSA 101
           D +L S     +  E++           +++ A +        +  +   R  K++    
Sbjct: 234 DTWLASYEGQEHASEMHRISGEAAYGLNDYTGAVKQLE----QYRQSTENRDRKAMYKLG 289

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVP 149
              Y+ G Y QAA+   E     P+       Y  +G++Y             +    + 
Sbjct: 290 MSYYNMGVYSQAAACLGE--ATGPKDALTQNAYLHMGLAYLQLKERNQARMAFEQASTMD 347

Query: 150 YDQRATKLML-------------------QYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
           +D+   +  L                       R +  Y NSPY      Y+        
Sbjct: 348 FDRSIREQALYNYALCIHETSYSPFAESVTVFERFLNEYPNSPYTDKVNDYLIEV----- 402

Query: 191 AKEVEIGRYYLKRGEYVAAIP 211
                    Y+    Y+AA+ 
Sbjct: 403 ---------YMNTKSYLAALK 414



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 79/239 (33%), Gaps = 42/239 (17%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAAS 115
           ++        +  F  A EYF+Q  +        +++   + +     +Y   KY+ AA+
Sbjct: 434 LFRLGTQAFAQAAFENAIEYFSQSLQL---GQYNQQTKADAYYWRGESKYRMEKYEAAAT 490

Query: 116 LGEEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
              +Y+       S+      Y +G    +        Q+     L +  R V     S 
Sbjct: 491 DLRQYLEFATNKNSQEYGLALYNLGYCAFK--------QKQYNKALNWFERCVPL-VASR 541

Query: 174 Y---VKGARFYV----------TVGRNQLAA---KEVEIGRYYLKRGEYVAAIPR----- 212
                  A   +             R+  A     +   G Y L +  +V  + R     
Sbjct: 542 ERTVAADASNRIGDCYFYARRFDEARSLYAQAVAYDPSFGDYSLFQEAFVKGLQRDYAGK 601

Query: 213 ---FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
                 +L  Y  +++ ++A+     A+V +     A    SL+ +RYP+   +R    
Sbjct: 602 IGTLNQLLTAYPSSQYLDDALYEQGRAFVLMEDHSNAINRYSLLVQRYPESPLSRKAAN 660


>gi|107100430|ref|ZP_01364348.1| hypothetical protein PaerPA_01001455 [Pseudomonas aeruginosa PACS2]
 gi|296390667|ref|ZP_06880142.1| tol-pal system protein YbgF [Pseudomonas aeruginosa PAb1]
 gi|313105861|ref|ZP_07792124.1| hypothetical protein PA39016_000110158 [Pseudomonas aeruginosa
           39016]
 gi|310878626|gb|EFQ37220.1| hypothetical protein PA39016_000110158 [Pseudomonas aeruginosa
           39016]
          Length = 213

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 48/137 (35%), Gaps = 8/137 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D   ++  Y+ A   +K ++F KA + FN   R +P +  +  +      V  + G 
Sbjct: 85  EPGDPAKEKLYYDAAFDLIKSKDFDKASQAFNAFLRKYPNSQYSGNAQYWLGEVNLAKGD 144

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            Q A          YP S+ V    Y +         DV             + +++ +Y
Sbjct: 145 LQGAGQAFARVSQSYPSSQKVPDSLYKLA--------DVERRLGNNDKAKGILQQVISQY 196

Query: 170 TNSPYVKGARFYVTVGR 186
             +   + A+  +   R
Sbjct: 197 PGTSAAQLAQRDLKNLR 213



 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 52/130 (40%), Gaps = 19/130 (14%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
             +I+   +D        Q  +  + +Y NS Y   A++++      LA  +++      
Sbjct: 100 FDLIKSKDFD-----KASQAFNAFLRKYPNSQYSGNAQYWLGEVN--LAKGDLQ------ 146

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
                  A   F  V  +Y  ++   +++ +L +    L   D+A+ ++  +  +YP   
Sbjct: 147 ------GAGQAFARVSQSYPSSQKVPDSLYKLADVERRLGNNDKAKGILQQVISQYPGTS 200

Query: 262 WARYVETLVK 271
            A+  +  +K
Sbjct: 201 AAQLAQRDLK 210


>gi|289650950|ref|ZP_06482293.1| tol-pal system protein YbgF [Pseudomonas syringae pv. aesculi str.
           2250]
          Length = 208

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 48/131 (36%), Gaps = 8/131 (6%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D   ++  YE A   +K ++F KA + F    R +P +  A  +      V  + G 
Sbjct: 81  EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 140

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            Q A     +   QYP+   V    Y +         DV      T  +   + ++V +Y
Sbjct: 141 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 192

Query: 170 TNSPYVKGARF 180
             +   + A+ 
Sbjct: 193 PGTSAAQLAQR 203



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
             +I+   +D        Q  +  + +Y NS Y   A++++      LA  +++      
Sbjct: 96  FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 142

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
                  A   F  V   Y       +++ +L +    L   D+ + ++  +  +YP   
Sbjct: 143 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 196

Query: 262 WARYVETLVK 271
            A+  +  ++
Sbjct: 197 AAQLAQRDLQ 206


>gi|118581443|ref|YP_902693.1| TPR domain-containing protein [Pelobacter propionicus DSM 2379]
 gi|118504153|gb|ABL00636.1| TPR domain protein [Pelobacter propionicus DSM 2379]
          Length = 272

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 45/141 (31%), Gaps = 22/141 (15%)

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
               YL G+   +                 + +  +  +     V  AR++         
Sbjct: 151 ADAIYLKGLEAFKAGNMP--------AARDFFATFIAEHPKHELVGNARYWTAEAL---- 198

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
                          Y AAI  FQ V+ N+        AM +   A+ A+   + AR V+
Sbjct: 199 ----------YAEKNYEAAIVSFQDVIKNHPKLSKIPAAMLKQGRAFKAIKDPNSARYVL 248

Query: 251 SLIQERYPQGYWARYVETLVK 271
             +   YP+   A+    L+K
Sbjct: 249 KKLIATYPKSEEAKRAGELLK 269



 Score = 56.7 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 51/153 (33%), Gaps = 13/153 (8%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
            LVG   +S +        D      +Y K +   K  N   A ++F     + P   + 
Sbjct: 133 GLVGKGAESEKFKDATPPADA-----IYLKGLEAFKAGNMPAARDFFATFIAEHPKHELV 187

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
             +   +A   Y+   Y+ A    ++ I  +P+   +       G +  + I+D      
Sbjct: 188 GNARYWTAEALYAEKNYEAAIVSFQDVIKNHPKLSKIPAAMLKQGRA-FKAIKDPN---- 242

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
                   + +++  Y  S   K A   +   +
Sbjct: 243 ---SARYVLKKLIATYPKSEEAKRAGELLKEIK 272


>gi|296109346|ref|YP_003616295.1| TPR repeat-containing protein [Methanocaldococcus infernus ME]
 gi|295434160|gb|ADG13331.1| TPR repeat-containing protein [Methanocaldococcus infernus ME]
          Length = 534

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 49/130 (37%), Gaps = 18/130 (13%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           R+ YEK + +  E  + KA E F++  +  P       +    A   Y   +Y++A    
Sbjct: 4   RKYYEKGLKYYNEGRYEKAIECFDKAIKLDPNNP---AAWYYKADSLYKLERYEKAIECF 60

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP---- 173
           ++ I   P +      +Y    S  ++ R         +  ++   + ++   N+P    
Sbjct: 61  DKAIKLDPNNPA---AWYYKADSLYKLER--------YEKAIECFDKAIKLDPNNPAAWY 109

Query: 174 YVKGARFYVT 183
           Y   + + + 
Sbjct: 110 YKADSLYKLE 119


>gi|298491818|ref|YP_003721995.1| TPR repeat-containing protein ['Nostoc azollae' 0708]
 gi|298233736|gb|ADI64872.1| TPR repeat-containing protein ['Nostoc azollae' 0708]
          Length = 731

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/240 (12%), Positives = 81/240 (33%), Gaps = 45/240 (18%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKY 110
           TD     + Y++     +++++ +A E F Q   +   F+       +     +Y+   Y
Sbjct: 454 TDSLTFIDYYDRGNEAYQKRDYEQAIENFTQGIKKKSTFSKF----YINRGNARYNLNDY 509

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           + A +   + +   P+           G +Y  +       ++  +  +   +  +    
Sbjct: 510 EGALADYNQALKINPQEVK---ALVNRGNAYYMLADYSSDPEQEYQKAINNFNTAIHI-- 564

Query: 171 NSPYVKGARFYVTVGRNQLA------AKEV--EIGRY-------------YLKRG--EYV 207
            +     A     + R+Q+A        E    I  +             Y +RG   Y 
Sbjct: 565 -NVRDTEAYIRRGIVRSQMAKYSSNYQHEYQKSIADFTEAIKLNTSKAEAYFQRGLARYQ 623

Query: 208 AA------IPRFQLVLANYSDAEHAEEAMARLVEAYVALAL--MDEAREVVSLIQERYPQ 259
            A         ++  + +++ A +      R+ + Y+   +   + A+   + +Q+ + Q
Sbjct: 624 FAQYSSNYAREYKQAIVDFTQAININ---PRMAKVYLKRGMVHYELAQYGENTVQQNHAQ 680


>gi|163848374|ref|YP_001636418.1| hypothetical protein Caur_2828 [Chloroflexus aurantiacus J-10-fl]
 gi|222526297|ref|YP_002570768.1| tetratricopeptide repeat-containing protein [Chloroflexus sp.
            Y-400-fl]
 gi|163669663|gb|ABY36029.1| Tetratricopeptide TPR_2 repeat protein [Chloroflexus aurantiacus
            J-10-fl]
 gi|222450176|gb|ACM54442.1| Tetratricopeptide TPR_2 repeat protein [Chloroflexus sp. Y-400-fl]
          Length = 1113

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 46/137 (33%), Gaps = 20/137 (14%)

Query: 52   TDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAG 108
             + R     Y +A+L ++   + +A    N       +FP      ++        Y+ G
Sbjct: 993  ANDRIAESFYRRALLAIRNGEYDQAIRDLNRATALQANFP------EAYYWLGRAYYAQG 1046

Query: 109  KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
            + + A    ++ IT  P         Y   + Y+ +I +   DQ            ++ R
Sbjct: 1047 RSESALQAIQQAITLNPN--------YSEAIFYSGLIAE---DQANFAAARDAYQTLISR 1095

Query: 169  YTNSPYVKGARFYVTVG 185
               S + + A   +   
Sbjct: 1096 EPTSEWGQRALAQIERL 1112



 Score = 49.3 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 66/219 (30%), Gaps = 45/219 (20%)

Query: 70   EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
            + N+  A  YF   +   P       +               +A +  +  +   P+   
Sbjct: 873  QGNWGVALAYFETAAAL-PGGDTNAAAQFWLGEALLRNDNLVRALAAYQRALELQPQYPE 931

Query: 130  VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR--- 186
                  L+G++         Y     +  LQ + R +++   S Y +   F   + +   
Sbjct: 932  A-----LLGLA------QTQYALGRAEEALQTVERAIQQ--KSNYAEAHLFRGKLLQEAG 978

Query: 187  ----------------NQLAAKEVEIGRYYLKRGEYVAAI---PRFQLVLANYSDAEHAE 227
                            +++A          ++ GEY  AI    R   + AN+       
Sbjct: 979  RFAEARAAYDAAIGANDRIAESFYRRALLAIRNGEYDQAIRDLNRATALQANFP------ 1032

Query: 228  EAMARLVEAYVALALMDEAREVVS---LIQERYPQGYWA 263
            EA   L  AY A    + A + +     +   Y +  + 
Sbjct: 1033 EAYYWLGRAYYAQGRSESALQAIQQAITLNPNYSEAIFY 1071


>gi|39998367|ref|NP_954318.1| hypothetical protein GSU3278 [Geobacter sulfurreducens PCA]
 gi|39985313|gb|AAR36668.1| hypothetical protein GSU3278 [Geobacter sulfurreducens PCA]
          Length = 966

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 1/69 (1%)

Query: 194 VEIGRYY-LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           + I  +   ++ +Y AAI R + VL  Y D    + A+  L  A        +A   +S 
Sbjct: 48  IFIAGFNAYQKKDYQAAIDRMKTVLDKYPDTPLRDMAIFWLARASFKAGYERDAARYMSQ 107

Query: 253 IQERYPQGY 261
             + YP   
Sbjct: 108 FFKEYPDSP 116



 Score = 45.5 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 38/110 (34%), Gaps = 6/110 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +  F  T    +A   ++     S       +        +++       +++++  A +
Sbjct: 13  MKSFRTTFVRCLAGYLIIASLLTS------PAFAVTSEDSQIFIAGFNAYQKKDYQAAID 66

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
                   +P   +   ++   A   + AG  + AA    ++  +YP+S 
Sbjct: 67  RMKTVLDKYPDTPLRDMAIFWLARASFKAGYERDAARYMSQFFKEYPDSP 116



 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 9/86 (10%)

Query: 89  FAGVARKSLLMSA-FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
           FA  +  S +  A F  Y    YQ A    +  + +YP++   D   + +  +  +    
Sbjct: 39  FAVTSEDSQIFIAGFNAYQKKDYQAAIDRMKTVLDKYPDTPLRDMAIFWLARASFKA--G 96

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSP 173
              D        +YMS+  + Y +SP
Sbjct: 97  YERD------AARYMSQFFKEYPDSP 116


>gi|229592293|ref|YP_002874412.1| hypothetical protein PFLU4906 [Pseudomonas fluorescens SBW25]
 gi|229364159|emb|CAY51806.1| putative exported protein [Pseudomonas fluorescens SBW25]
          Length = 278

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 48/136 (35%), Gaps = 8/136 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D   ++  Y+ A   +K ++F +A + F    R +P +  A  +      V  + G 
Sbjct: 151 EPGDPAKEKLYYDAAFDLIKAKDFDRASQAFTAFLRKYPNSQYAGNAQYWLGEVNLAKGD 210

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            Q A     +    YP+   V    Y +         DV      T  +   + ++V +Y
Sbjct: 211 LQGAGQAFAKVSQLYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 262

Query: 170 TNSPYVKGARFYVTVG 185
             +   + A+  +   
Sbjct: 263 PGTSAAQLAQRDLQRL 278



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 54/147 (36%), Gaps = 22/147 (14%)

Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
           P     + +YY        +I+   +D+       Q  +  + +Y NS Y   A++++  
Sbjct: 152 PGDPAKEKLYYDAA---FDLIKAKDFDR-----ASQAFTAFLRKYPNSQYAGNAQYWLGE 203

Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
               LA  +++             A   F  V   Y       +++ +L +    L   D
Sbjct: 204 VN--LAKGDLQ------------GAGQAFAKVSQLYPKHAKVPDSLYKLADVERRLGHTD 249

Query: 245 EAREVVSLIQERYPQGYWARYVETLVK 271
           + + ++  +  +YP    A+  +  ++
Sbjct: 250 KVKGILQQVVAQYPGTSAAQLAQRDLQ 276


>gi|298507307|gb|ADI86030.1| pentapeptide repeat protein [Geobacter sulfurreducens KN400]
          Length = 952

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 1/69 (1%)

Query: 194 VEIGRYY-LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           + I  +   ++ +Y AAI R + VL  Y D    + A+  L  A        +A   +S 
Sbjct: 39  IFIAGFNAYQKKDYQAAIDRMKTVLDKYPDTPLRDMAIFWLARASFKAGYERDAARYMSQ 98

Query: 253 IQERYPQGY 261
             + YP   
Sbjct: 99  FFKEYPDSP 107



 Score = 45.5 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 38/110 (34%), Gaps = 6/110 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +  F  T    +A   ++     S       +        +++       +++++  A +
Sbjct: 4   MKSFRTTFVRCLAGYLIIASLLTS------PAFAVTSEDSQIFIAGFNAYQKKDYQAAID 57

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
                   +P   +   ++   A   + AG  + AA    ++  +YP+S 
Sbjct: 58  RMKTVLDKYPDTPLRDMAIFWLARASFKAGYERDAARYMSQFFKEYPDSP 107



 Score = 36.2 bits (83), Expect = 5.2,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 9/86 (10%)

Query: 89  FAGVARKSLLMSA-FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
           FA  +  S +  A F  Y    YQ A    +  + +YP++   D   + +  +  +    
Sbjct: 30  FAVTSEDSQIFIAGFNAYQKKDYQAAIDRMKTVLDKYPDTPLRDMAIFWLARASFKA--G 87

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSP 173
              D        +YMS+  + Y +SP
Sbjct: 88  YERD------AARYMSQFFKEYPDSP 107


>gi|188534418|ref|YP_001908215.1| tol-pal system protein YbgF [Erwinia tasmaniensis Et1/99]
 gi|188029460|emb|CAO97337.1| Conserved hypothetical protein [Erwinia tasmaniensis Et1/99]
          Length = 270

 Score = 56.7 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 47/152 (30%), Gaps = 9/152 (5%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPF 89
           A        + +S +    +          Y  AV   L+++ +  A   F    + +P 
Sbjct: 123 AAADNSADSKAASNNAAASTPVQSGDANTDYNAAVALVLEKKQYDSAISAFQAFVKKYPD 182

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +     +      + Y+ GK   AA      +  YP+S       + VG+   +      
Sbjct: 183 STFQPNANYWLGQLNYNKGKKDDAAYYFATVVKNYPKSPKSADALFKVGVIMQEKGDKA- 241

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                         ++++ Y NS   K +   
Sbjct: 242 -------KAKAVYQQVIKLYPNSEAAKLSEKR 266



 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 39/111 (35%), Gaps = 14/111 (12%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
            +      V++Y +S +   A +++                    +G+   A   F  V+
Sbjct: 169 AISAFQAFVKKYPDSTFQPNANYWLGQLN--------------YNKGKKDDAAYYFATVV 214

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
            NY  +  + +A+ ++           +A+ V   + + YP    A+  E 
Sbjct: 215 KNYPKSPKSADALFKVGVIMQEKGDKAKAKAVYQQVIKLYPNSEAAKLSEK 265



 Score = 45.1 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 27/66 (40%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           L++ +Y +AI  FQ  +  Y D+     A   L +        D+A    + + + YP+ 
Sbjct: 161 LEKKQYDSAISAFQAFVKKYPDSTFQPNANYWLGQLNYNKGKKDDAAYYFATVVKNYPKS 220

Query: 261 YWARYV 266
             +   
Sbjct: 221 PKSADA 226



 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 42/119 (35%), Gaps = 22/119 (18%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +Y  A S  + ++ +YP+S       Y +G       +              Y + +V+
Sbjct: 164 KQYDSAISAFQAFVKKYPDSTFQPNANYWLGQLNYNKGKKDD--------AAYYFATVVK 215

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
            Y  SP    A F V V                 ++G+   A   +Q V+  Y ++E A
Sbjct: 216 NYPKSPKSADALFKVGVIMQ--------------EKGDKAKAKAVYQQVIKLYPNSEAA 260


>gi|183221520|ref|YP_001839516.1| TPR repeat-containing protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189911604|ref|YP_001963159.1| hypothetical protein LBF_2084 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167776280|gb|ABZ94581.1| Conserved hypothetical protein containing tetratricopeptide repeat
           (TPR) domains [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167779942|gb|ABZ98240.1| Putative TPR-repeat-containing protein [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
          Length = 700

 Score = 56.7 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 79/209 (37%), Gaps = 24/209 (11%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
             ++  A L+ K+    +A   F +  R  P    +  + +    +     +Y ++ +  
Sbjct: 389 DSLFALAELYYKKGELVEAESLFRRIIRLTPGDTYSETAYVNLGIILDEMERYSESIAAF 448

Query: 118 EEYITQYPESKNVDYVYYLVGMSYA----------QMIRDVPYDQR--ATKLMLQYMSRI 165
           E  ++  P++++    YY +G+SY            + +    D     ++L +     +
Sbjct: 449 EGALSLNPKNQS---AYYNLGLSYLHAGKPTMAIESLRKSQALDPNHVPSRLAIADYY-L 504

Query: 166 VERYTN---SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
             R+ N   S Y + A  +        A   +++   Y++   Y AA      VL N  D
Sbjct: 505 ENRFYNEAISEY-EEAIAWKPELYE--AR--LKLADVYIQTKNYQAAEKMLVYVLENAKD 559

Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVS 251
            +  + A  +L  +Y +   +  +++   
Sbjct: 560 PKEIKLAHRKLALSYASSGNVGSSKKAKE 588



 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 41/209 (19%), Positives = 70/209 (33%), Gaps = 28/209 (13%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A+ +LK+ N ++A   F +  +  P +  A  S      + Y    Y +A     E 
Sbjct: 253 YNLAISYLKQGNLAEAISEFQKVVQTAPNSQTAVLSYGHLGTIFYQREDYDRAEYYFREV 312

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-- 178
           I            YY +G+ Y +  +      +  +  L   +   E Y    Y+  A  
Sbjct: 313 IRLKTGDAK---AYYNLGLVYLKK-KVPEEAAKYFQKALDANANEPEVY---RYIADAFL 365

Query: 179 -----RFYVTVGRNQL------AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
                   +T  +  L            +   Y K+GE V A   F+ ++       ++E
Sbjct: 366 SMGQTNMAITALKKALLLKPSDVDSLFALAELYYKKGELVEAESLFRRIIRLTPGDTYSE 425

Query: 228 EAMARLVEAYVALALM-DEAREVVSLIQE 255
                   AYV L ++ DE       I  
Sbjct: 426 -------TAYVNLGIILDEMERYSESIAA 447



 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 80/252 (31%), Gaps = 59/252 (23%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQ-CSRD------FPFAGVA------------ 93
                +  Y   +++LK++   +A +YF +    +      + +   A            
Sbjct: 316 KTGDAKAYYNLGLVYLKKKVPEEAAKYFQKALDANANEPEVYRYIADAFLSMGQTNMAIT 375

Query: 94  --RKSLL----------MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
             +K+LL            A + Y  G+  +A SL    I   P     +  Y  +G+  
Sbjct: 376 ALKKALLLKPSDVDSLFALAELYYKKGELVEAESLFRRIIRLTPGDTYSETAYVNLGIIL 435

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYT--NSPYVKGARFYVTVGRNQLA----AKE-- 193
            +M R            +      +       S Y      Y+  G+  +A     K   
Sbjct: 436 DEMERYS--------ESIAAFEGALSLNPKNQSAYYNLGLSYLHAGKPTMAIESLRKSQA 487

Query: 194 ---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
                    + I  YYL+   Y  AI  ++  +A         EA  +L + Y+      
Sbjct: 488 LDPNHVPSRLAIADYYLENRFYNEAISEYEEAIAW---KPELYEARLKLADVYIQTKNYQ 544

Query: 245 EAREVVSLIQER 256
            A +++  + E 
Sbjct: 545 AAEKMLVYVLEN 556


>gi|77362059|ref|YP_341633.1| putative lytic cell-wall binding lipoprotein [Pseudoalteromonas
           haloplanktis TAC125]
 gi|76876970|emb|CAI89187.1| putative lytic cell-wall binding lipoprotein [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 577

 Score = 56.7 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 44/258 (17%), Positives = 81/258 (31%), Gaps = 33/258 (12%)

Query: 22  FALTIF-FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
             LTI   ++  C        S + V  + +      R     A+ +L   N S+A    
Sbjct: 5   LVLTISTLALGGCVTENSYNGSDKPVVENKINSAGAARTRIALALQYLNTGNNSQAKYNL 64

Query: 81  NQCSRDFPFAGVAR---KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV--DYVYY 135
            +       +  A    +     A+     G+ + A    ++ +   P+  N   +Y  +
Sbjct: 65  ERA------SEYAPNLPEVHYSLAYYYQQVGENKLADLAYQKALAIKPDDPNTLNNYGVF 118

Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN-------SPYVKGARFYVTVGRNQ 188
           L G+       D   DQ    + +    R+ + Y N             A  Y     N 
Sbjct: 119 LCGIDEY----DRATDQFLKAIAIPSYIRVAQSYENLALCAIEFDDFDNAETYFQQAINH 174

Query: 189 LAAKEVE----IGRYYLKRGEYVAAIPRFQLVLANYSDAEHA-EEAMARLVEAYVALALM 243
            + +          YY K   Y A+      +L  Y D       A+         +  +
Sbjct: 175 SSQRASTLISLAALYYAKSDLYKASA-----LLKRYDDTAQISPRALLLSYLIKQRMGKI 229

Query: 244 DEAREVVSLIQERYPQGY 261
           +EA ++ + I + YP   
Sbjct: 230 EEAEKIAATILQTYPSSD 247


>gi|295096554|emb|CBK85644.1| tol-pal system protein YbgF [Enterobacter cloacae subsp. cloacae
           NCTC 9394]
          Length = 165

 Score = 56.7 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 45/123 (36%), Gaps = 9/123 (7%)

Query: 61  YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A+  +++++    A   F    + +P +     +      + Y+ GK   AA     
Sbjct: 47  YNAAIALVQDKSRQDDAIVAFQNFVKKYPDSTYQPNANYWLGQLNYNKGKKDDAAFYFAS 106

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       Y VG+        +  D+  T        ++V ++  +   K A+
Sbjct: 107 VVKNYPKSPKAPDAMYKVGV--------IMQDKGDTAKAKAVYQQVVAKFPGTDGAKQAQ 158

Query: 180 FYV 182
             +
Sbjct: 159 KRL 161



 Score = 49.0 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 44/131 (33%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      V++Y +S Y   A +++               
Sbjct: 43  ANTDYNAAIALVQDKSRQDDAIVAFQNFVKKYPDSTYQPNANYWLGQLN----------- 91

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
             Y K  +  AA   F  V+ NY  +  A +AM ++           +A+ V   +  ++
Sbjct: 92  --YNKGKKDDAAFY-FASVVKNYPKSPKAPDAMYKVGVIMQDKGDTAKAKAVYQQVVAKF 148

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 149 PGTDGAKQAQK 159


>gi|255020133|ref|ZP_05292203.1| TPR repeat containing exported protein; Putative periplasmic
           protein contains a protein prenylyltransferase domain
           [Acidithiobacillus caldus ATCC 51756]
 gi|254970426|gb|EET27918.1| TPR repeat containing exported protein; Putative periplasmic
           protein contains a protein prenylyltransferase domain
           [Acidithiobacillus caldus ATCC 51756]
          Length = 276

 Score = 56.7 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 52/135 (38%), Gaps = 15/135 (11%)

Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
           +G +  Q   D+          +  +   + +Y  S  V  A +++   +  L   +   
Sbjct: 153 LGQADYQRAFDLLR-AGKYGSAVTALQDFIRKYPQSSLVVNAYYWLGQAQYVLGQND--- 208

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
                      AAI     V   Y+ +  A EAM RL E Y A     +AR V++ + ++
Sbjct: 209 -----------AAIKSLSTVENQYAQSSLAPEAMLRLAEVYQATGQATKARAVLNKVLKQ 257

Query: 257 YPQGYWARYVETLVK 271
           YP    A+  +  ++
Sbjct: 258 YPSTPSAQKAQARLQ 272



 Score = 56.7 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 52/139 (37%), Gaps = 22/139 (15%)

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           ++    AF    AGKY  A +  +++I +YP+S  V   YY +G +   + ++       
Sbjct: 155 QADYQRAFDLLRAGKYGSAVTALQDFIRKYPQSSLVVNAYYWLGQAQYVLGQN------- 207

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
               ++ +S +  +Y  S     A   +                 Y   G+   A     
Sbjct: 208 -DAAIKSLSTVENQYAQSSLAPEAMLRL--------------AEVYQATGQATKARAVLN 252

Query: 215 LVLANYSDAEHAEEAMARL 233
            VL  Y     A++A ARL
Sbjct: 253 KVLKQYPSTPSAQKAQARL 271



 Score = 52.8 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 17/125 (13%), Positives = 40/125 (32%), Gaps = 8/125 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y++A   L+   +  A        R +P + +   +       QY  G+   A       
Sbjct: 158 YQRAFDLLRAGKYGSAVTALQDFIRKYPQSSLVVNAYYWLGQAQYVLGQNDAAIKSLSTV 217

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
             QY +S         +   Y                    +++++++Y ++P  + A+ 
Sbjct: 218 ENQYAQSSLAPEAMLRLAEVYQAT--------GQATKARAVLNKVLKQYPSTPSAQKAQA 269

Query: 181 YVTVG 185
            +   
Sbjct: 270 RLQAM 274



 Score = 45.5 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/94 (13%), Positives = 32/94 (34%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G    + +D               Y              A +  +     +  + +A ++
Sbjct: 171 GSAVTALQDFIRKYPQSSLVVNAYYWLGQAQYVLGQNDAAIKSLSTVENQYAQSSLAPEA 230

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           +L  A V  + G+  +A ++  + + QYP + + 
Sbjct: 231 MLRLAEVYQATGQATKARAVLNKVLKQYPSTPSA 264


>gi|224372380|ref|YP_002606752.1| TPR repeat protein [Nautilia profundicola AmH]
 gi|223589863|gb|ACM93599.1| TPR repeat protein [Nautilia profundicola AmH]
          Length = 297

 Score = 56.7 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 54/142 (38%), Gaps = 18/142 (12%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN-QCSRDF--PFAGVARKSLLMSAFVQ 104
           L+        +  + +A  +      +KA E F     + +    +            + 
Sbjct: 170 LNKPAKNINPKTAFAQAKKYFYSGKLNKAEELFAYTLQKKYLPATSSY------YLGEIA 223

Query: 105 YSAGKYQQAASLGEEYITQYPE-SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           Y  G+Y++A +  ++ I+ YP+ +   D + Y  GMS+ ++ +         +       
Sbjct: 224 YKQGRYKEALAFYKKSISLYPKKTSFTDRLLYHTGMSFLKLNQK--------QNAKLTFK 275

Query: 164 RIVERYTNSPYVKGARFYVTVG 185
           +++  + NS Y K A+  +   
Sbjct: 276 KLISDFPNSKYAKLAKKELEKL 297



 Score = 39.7 bits (92), Expect = 0.44,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 29/80 (36%), Gaps = 1/80 (1%)

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD-AEHAEEAMARLVEAYVALALMDEARE 248
           A     +G    K+G Y  A+  ++  ++ Y       +  +     +++ L     A+ 
Sbjct: 213 ATSSYYLGEIAYKQGRYKEALAFYKKSISLYPKKTSFTDRLLYHTGMSFLKLNQKQNAKL 272

Query: 249 VVSLIQERYPQGYWARYVET 268
               +   +P   +A+  + 
Sbjct: 273 TFKKLISDFPNSKYAKLAKK 292


>gi|299138484|ref|ZP_07031663.1| TPR repeat-containing protein [Acidobacterium sp. MP5ACTX8]
 gi|298599730|gb|EFI55889.1| TPR repeat-containing protein [Acidobacterium sp. MP5ACTX8]
          Length = 322

 Score = 56.7 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/140 (14%), Positives = 50/140 (35%), Gaps = 8/140 (5%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
           +R     S +D     ++Y  A        ++ A   F+   + +P   +A  +      
Sbjct: 180 TRPDAKPSASDAPPVADMYRTAYSDYMGAKYALASSEFDDLIKAYPDDNLAGNAYFYIGE 239

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
           +     K   A    +  + +YP++  +   +   G +   M ++           ++ +
Sbjct: 240 INSKTQKPTAAVKSYDHLLERYPDNAKIPAAHLHKGEALLAMKQN--------DAGIREL 291

Query: 163 SRIVERYTNSPYVKGARFYV 182
             +++R+  SP    AR  +
Sbjct: 292 RSLIQRFPQSPEASQARSKL 311



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 35/106 (33%), Gaps = 16/106 (15%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE-VEIGRYYLKRGEYVAAIPRFQL 215
           L       +++ Y +               + LA      IG    K  +  AA+  +  
Sbjct: 212 LASSEFDDLIKAYPD---------------DNLAGNAYFYIGEINSKTQKPTAAVKSYDH 256

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +L  Y D      A     EA +A+   D     +  + +R+PQ  
Sbjct: 257 LLERYPDNAKIPAAHLHKGEALLAMKQNDAGIRELRSLIQRFPQSP 302


>gi|146306311|ref|YP_001186776.1| TPR repeat-containing protein [Pseudomonas mendocina ymp]
 gi|145574512|gb|ABP84044.1| Tetratricopeptide TPR_2 repeat protein [Pseudomonas mendocina ymp]
          Length = 270

 Score = 56.7 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/136 (16%), Positives = 44/136 (32%), Gaps = 8/136 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D   ++  Y+ A   +K ++F KA + F      +P +  A  +      V  + G 
Sbjct: 143 EPGDPAKEKLYYDAAFDLIKAKDFDKASQAFTAFLNRYPNSQYAGNAQYWLGEVNLAKGD 202

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            Q A     +    YP    V    + +         DV             + +++ +Y
Sbjct: 203 LQAAGQAFAKVSQAYPSHAKVPDSLFKLA--------DVERRLGNNDKARGILQQVIAQY 254

Query: 170 TNSPYVKGARFYVTVG 185
             S   + A+  +   
Sbjct: 255 PGSSAAQLAQRDLQRL 270



 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 50/130 (38%), Gaps = 19/130 (14%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
             +I+   +D        Q  +  + RY NS Y   A++++      LA  +++      
Sbjct: 158 FDLIKAKDFD-----KASQAFTAFLNRYPNSQYAGNAQYWLGEVN--LAKGDLQ------ 204

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
                 AA   F  V   Y       +++ +L +    L   D+AR ++  +  +YP   
Sbjct: 205 ------AAGQAFAKVSQAYPSHAKVPDSLFKLADVERRLGNNDKARGILQQVIAQYPGSS 258

Query: 262 WARYVETLVK 271
            A+  +  ++
Sbjct: 259 AAQLAQRDLQ 268


>gi|145605685|ref|XP_370444.2| hypothetical protein MGG_06941 [Magnaporthe oryzae 70-15]
 gi|145013485|gb|EDJ98126.1| hypothetical protein MGG_06941 [Magnaporthe oryzae 70-15]
          Length = 478

 Score = 56.7 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/143 (12%), Positives = 41/143 (28%), Gaps = 21/143 (14%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAA 114
             E+  +     +  ++ KA E + Q     P      + ++             Y  A 
Sbjct: 8   ATELKNQGNKAFQSHDWPKAIELYTQAIELNPEEPTLYSNRAQ-----AYLKTEAYGYAV 62

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
           +   + I   P        YY   ++   ++R  P D       L+     V+    +  
Sbjct: 63  ADATKAIELNPGFVK---AYYRRAIANTAILR--PRD------ALKDFKSCVKIDPGNK- 110

Query: 175 VKGARFYVTVGRNQLAAKEVEIG 197
              A+  +   +  +   +    
Sbjct: 111 --DAKLKLVECQKVVRQLDFYAA 131


>gi|331645893|ref|ZP_08346996.1| putative periplasmic protein [Escherichia coli M605]
 gi|281177885|dbj|BAI54215.1| conserved hypothetical protein [Escherichia coli SE15]
 gi|330910493|gb|EGH39003.1| TPR repeat containing exported protein [Escherichia coli AA86]
 gi|331044645|gb|EGI16772.1| putative periplasmic protein [Escherichia coli M605]
          Length = 263

 Score = 56.7 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 46/126 (36%), Gaps = 9/126 (7%)

Query: 61  YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A+  +++++    A   F    +++P +     +      + Y+ GK   AA     
Sbjct: 146 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       + VG+        +  D+  T        +++ +Y  +   K A+
Sbjct: 206 VVKNYPKSPKAADAMFKVGV--------IMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257

Query: 180 FYVTVG 185
             +   
Sbjct: 258 KRLNAM 263



 Score = 51.7 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      ++ Y +S Y+  A +++               
Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLN----------- 190

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
                +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 191 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 247

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 248 PGTDGAKQAQK 258



 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I  YP+S  +    Y +G       +              Y + +V+ Y 
Sbjct: 160 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A F V V                  +G+   A   +Q V++ Y   + A++A 
Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257

Query: 231 ARL 233
            RL
Sbjct: 258 KRL 260


>gi|289207753|ref|YP_003459819.1| tol-pal system protein YbgF [Thioalkalivibrio sp. K90mix]
 gi|288943384|gb|ADC71083.1| tol-pal system protein YbgF [Thioalkalivibrio sp. K90mix]
          Length = 276

 Score = 56.7 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 43/107 (40%), Gaps = 5/107 (4%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           ++  Y++A   L   +++ A     +    +P +  +  +    A  +Y++G ++ A   
Sbjct: 153 EQAAYQEAFEQLMAGDYNAAMSGLERFIETYPDSDYSANAWYWLAEAKYASGDFEAALED 212

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
            E    QYPES         +G ++ ++  +        +  L+ + 
Sbjct: 213 FEHLREQYPESDKSGDALLKIGYAHYELGNEDE-----AREALEAVR 254



 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 34/101 (33%), Gaps = 13/101 (12%)

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
            ++    AF Q  AG Y  A S  E +I  YP+S      +Y +  +             
Sbjct: 153 EQAAYQEAFEQLMAGDYNAAMSGLERFIETYPDSDYSANAWYWLAEAKYAS--------G 204

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
             +  L+    + E+Y  S     A   +       A  E+
Sbjct: 205 DFEAALEDFEHLREQYPESDKSGDALLKIGY-----AHYEL 240



 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 45/101 (44%), Gaps = 14/101 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             +  + R +E Y +S Y   A +++   +                 G++ AA+  F+ +
Sbjct: 171 AAMSGLERFIETYPDSDYSANAWYWLAEAK--------------YASGDFEAALEDFEHL 216

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
              Y +++ + +A+ ++  A+  L   DEARE +  ++  +
Sbjct: 217 REQYPESDKSGDALLKIGYAHYELGNEDEAREALEAVRADF 257



 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 2/68 (2%)

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
           G+Y AA+   +  +  Y D++++  A   L EA  A    + A E    ++E+YP+    
Sbjct: 167 GDYNAAMSGLERFIETYPDSDYSANAWYWLAEAKYASGDFEAALEDFEHLREQYPESD-- 224

Query: 264 RYVETLVK 271
           +  + L+K
Sbjct: 225 KSGDALLK 232


>gi|113478146|ref|YP_724207.1| TPR repeat-containing serine/threonine protein kinase
           [Trichodesmium erythraeum IMS101]
 gi|110169194|gb|ABG53734.1| serine/threonine protein kinase with TPR repeats [Trichodesmium
           erythraeum IMS101]
          Length = 746

 Score = 56.7 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 70/226 (30%), Gaps = 49/226 (21%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
           Y  ++         Y +   + + +N+  A   + +     P       +      V + 
Sbjct: 370 YSKAIKGFEKPEYFYGRGNAYYELKNYQNAISDYTKAILLNPSN---VNAYFNRGVVYFE 426

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
              Y +A +   + +   PE       YY  G+ Y +    +          +Q  ++++
Sbjct: 427 QQNYPKAINDFTQILRLQPEH---AEAYYKRGLVYYKSQDYL--------KAIQDYTQVI 475

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEV--EIGRY-------------YLKRGEYVAAIP 211
               N+     A  Y+  G    A   +   I  Y             Y +RG       
Sbjct: 476 GLRPNTLDAYNA--YLGRGVAYAANNNLQKAIADYTQMIKIKPQKIDGYYRRG------- 526

Query: 212 RFQLVLANYSDA-----------EHAEEAMARLVEAYVALALMDEA 246
           R +  + +Y  +              E+A AR    Y+ LA  ++A
Sbjct: 527 RARFFMGDYQGSLDDYNQVIKINPKNEDAYARRCSTYLNLAEYEKA 572



 Score = 52.0 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 63/202 (31%), Gaps = 46/202 (22%)

Query: 52  TDVRYQREVYEKAVLFLKEQN-------FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
            +     +V+++     ++ +       +SKA + F +    + +               
Sbjct: 342 PNSIKAEKVFKQGEERARDGDIPAAILLYSKAIKGFEKPE--YFYGR---------GNAY 390

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y    YQ A S   + I   P + N    Y+  G+ Y +        Q+     +   ++
Sbjct: 391 YELKNYQNAISDYTKAILLNPSNVN---AYFNRGVVYFE--------QQNYPKAINDFTQ 439

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           I+       + +                    G  Y K  +Y+ AI  +  V+    +  
Sbjct: 440 ILRLQP--EHAEAYYKR---------------GLVYYKSQDYLKAIQDYTQVIGLRPNTL 482

Query: 225 HAEEAMARLVEAYVALALMDEA 246
            A  A      AY A   + +A
Sbjct: 483 DAYNAYLGRGVAYAANNNLQKA 504


>gi|319760472|ref|YP_004124410.1| tol-pal system protein YbgF [Candidatus Blochmannia vafer str.
           BVAF]
 gi|318039186|gb|ADV33736.1| tol-pal system protein YbgF [Candidatus Blochmannia vafer str.
           BVAF]
          Length = 243

 Score = 56.7 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 18/121 (14%), Positives = 44/121 (36%), Gaps = 8/121 (6%)

Query: 68  LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
           L+++ + +A + F    +++P +     +      + Y+      A+      +  YP+S
Sbjct: 131 LEKKQYDRAIQTFQDFIKNYPQSNYQPNAHYWLGQLYYNQNDKNNASYHFALVVKNYPKS 190

Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
                    +G+   Q    +               ++ + Y NS   K A+  +T  +N
Sbjct: 191 SKAPDALLKIGII-MQETNQID-------KSKTIYKQLGKLYPNSNAAKHAQKQLTYLKN 242

Query: 188 Q 188
           +
Sbjct: 243 K 243



 Score = 55.9 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 52/140 (37%), Gaps = 21/140 (15%)

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           N++   Y + +S     +            +Q     ++ Y  S Y   A +++      
Sbjct: 117 NIEDADYKLAVSLVLEKKQYDR-------AIQTFQDFIKNYPQSNYQPNAHYWL------ 163

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
                   G+ Y  + +   A   F LV+ NY  +  A +A+ ++         +D+++ 
Sbjct: 164 --------GQLYYNQNDKNNASYHFALVVKNYPKSSKAPDALLKIGIIMQETNQIDKSKT 215

Query: 249 VVSLIQERYPQGYWARYVET 268
           +   + + YP    A++ + 
Sbjct: 216 IYKQLGKLYPNSNAAKHAQK 235



 Score = 43.2 bits (101), Expect = 0.035,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 2/71 (2%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           L++ +Y  AI  FQ  + NY  + +   A   L + Y      + A    +L+ + YP+ 
Sbjct: 131 LEKKQYDRAIQTFQDFIKNYPQSNYQPNAHYWLGQLYYNQNDKNNASYHFALVVKNYPKS 190

Query: 261 YWARYVETLVK 271
              +  + L+K
Sbjct: 191 S--KAPDALLK 199


>gi|170769032|ref|ZP_02903485.1| tol-pal system protein YbgF [Escherichia albertii TW07627]
 gi|170122104|gb|EDS91035.1| tol-pal system protein YbgF [Escherichia albertii TW07627]
          Length = 263

 Score = 56.7 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 46/126 (36%), Gaps = 9/126 (7%)

Query: 61  YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A+  +++++    A   F    +++P +     +      + Y+ GK   AA     
Sbjct: 146 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       + VG+        +  D+  T        +++ +Y  +   K A+
Sbjct: 206 VVKNYPKSPKAADAMFKVGV--------IMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257

Query: 180 FYVTVG 185
             +   
Sbjct: 258 KRLNAM 263



 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/143 (15%), Positives = 45/143 (31%), Gaps = 24/143 (16%)

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
              N DY               +  D+      +      ++ Y +S Y+  A +++   
Sbjct: 140 GDPNTDY----------NAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQL 189

Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
                            +G+   A   F  V+ NY  +  A +AM ++           +
Sbjct: 190 N--------------YNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAK 235

Query: 246 AREVVSLIQERYPQGYWARYVET 268
           A+ V   +  +YP    A+  + 
Sbjct: 236 AKAVYQQVISKYPGTDGAKQAQK 258



 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I  YP+S  +    Y +G       +              Y + +V+ Y 
Sbjct: 160 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A F V V                  +G+   A   +Q V++ Y   + A++A 
Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257

Query: 231 ARL 233
            RL
Sbjct: 258 KRL 260


>gi|291288226|ref|YP_003505042.1| tol-pal system protein YbgF [Denitrovibrio acetiphilus DSM 12809]
 gi|290885386|gb|ADD69086.1| tol-pal system protein YbgF [Denitrovibrio acetiphilus DSM 12809]
          Length = 251

 Score = 56.7 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 50/130 (38%), Gaps = 24/130 (18%)

Query: 102 FVQ--YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
           +    Y  GKY ++ +   E++ +YP+ +  D   Y +G        ++ Y ++  +  +
Sbjct: 134 YAYELYRNGKYAESETKFNEFLMKYPDVERSDNAMYWLG--------EIKYAEKDYESAV 185

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
                +VERY     V  A   +      ++ K+               A+   Q V+  
Sbjct: 186 MKFQELVERYPEGNKVPDALLKMGYSYGNISDKD--------------NAVKSLQKVVNM 231

Query: 220 YSDAEHAEEA 229
           Y +++ A  A
Sbjct: 232 YPESDAARLA 241



 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 55/144 (38%), Gaps = 8/144 (5%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
           +S  +  +    +++ +  +Y  A    +   ++++   FN+    +P    +  ++   
Sbjct: 112 KSGDEEVIIVEDNIQDKIGLYTYAYELYRNGKYAESETKFNEFLMKYPDVERSDNAMYWL 171

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
             ++Y+   Y+ A    +E + +YPE   V      +G SY  +              ++
Sbjct: 172 GEIKYAEKDYESAVMKFQELVERYPEGNKVPDALLKMGYSYGNISDK--------DNAVK 223

Query: 161 YMSRIVERYTNSPYVKGARFYVTV 184
            + ++V  Y  S   + A   +  
Sbjct: 224 SLQKVVNMYPESDAARLATQKLRF 247



 Score = 52.0 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 41/103 (39%), Gaps = 14/103 (13%)

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
            +  + +Y +      A +++   +                  +Y +A+ +FQ ++  Y 
Sbjct: 151 FNEFLMKYPDVERSDNAMYWLGEIK--------------YAEKDYESAVMKFQELVERYP 196

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
           +     +A+ ++  +Y  ++  D A + +  +   YP+   AR
Sbjct: 197 EGNKVPDALLKMGYSYGNISDKDNAVKSLQKVVNMYPESDAAR 239



 Score = 35.5 bits (81), Expect = 7.6,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 2/71 (2%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            + G+Y  +  +F   L  Y D E ++ AM  L E   A    + A      + ERYP+G
Sbjct: 139 YRNGKYAESETKFNEFLMKYPDVERSDNAMYWLGEIKYAEKDYESAVMKFQELVERYPEG 198

Query: 261 YWARYVETLVK 271
              +  + L+K
Sbjct: 199 N--KVPDALLK 207


>gi|331656761|ref|ZP_08357723.1| putative periplasmic protein [Escherichia coli TA206]
 gi|222032478|emb|CAP75217.1| Uncharacterized protein ybgF [Escherichia coli LF82]
 gi|312945266|gb|ADR26093.1| tol-pal system protein YbgF [Escherichia coli O83:H1 str. NRG 857C]
 gi|315299255|gb|EFU58507.1| tol-pal system protein YbgF [Escherichia coli MS 16-3]
 gi|331055009|gb|EGI27018.1| putative periplasmic protein [Escherichia coli TA206]
          Length = 263

 Score = 56.7 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 46/126 (36%), Gaps = 9/126 (7%)

Query: 61  YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A+  +++++    A   F    +++P +     +      + Y+ GK   AA     
Sbjct: 146 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       + VG+        +  D+  T        +++ +Y  +   K A+
Sbjct: 206 VVKNYPKSPKAADAMFKVGV--------IMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257

Query: 180 FYVTVG 185
             +   
Sbjct: 258 KRLNAM 263



 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      ++ Y +S Y+  A +++               
Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLN----------- 190

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
                +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 191 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 247

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 248 PGTDGAKQAQK 258



 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I  YP+S  +    Y +G       +              Y + +V+ Y 
Sbjct: 160 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A F V V                  +G+   A   +Q V++ Y   + A++A 
Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257

Query: 231 ARL 233
            RL
Sbjct: 258 KRL 260


>gi|94970032|ref|YP_592080.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94552082|gb|ABF42006.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
           Ellin345]
          Length = 1096

 Score = 56.7 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/273 (14%), Positives = 82/273 (30%), Gaps = 53/273 (19%)

Query: 4   VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63
           ++ R + I     Y  Y+ A+      A+         +  D  +          ++++ 
Sbjct: 623 IMQREVPIKRFGDYHAYRLAVNSDHGQALTL-------TRTDASVAGAEKDAKADDLFDA 675

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A   ++ +N+  A E   +     P       +    A   Y+AG   +A    ++ +  
Sbjct: 676 AQAAVRAENYQNAIELLQRALVLEPEHKYGWDA---LAETYYNAGDLNKAIEYYKKQLEV 732

Query: 124 YP----ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            P     +  +  VY    M+  +               L    +  E            
Sbjct: 733 NPYDDLANTGLAQVY----MTQYKYDD-----------ALAAFKKQAEINP--------- 768

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                  ++ A   + IG+  + R +Y AA+P  +  ++    +     A   L  AY+ 
Sbjct: 769 ------LDKTA--HLGIGQVDIIREDYKAAVPELERAVSILPQSSV---ARYMLGNAYLN 817

Query: 240 LALMDEAREVVS---LIQERYPQGYWARYVETL 269
               ++A         +    P   W      L
Sbjct: 818 TGQTEKAITAFEESVKLDANNPMT-WNDIAYAL 849


>gi|320102982|ref|YP_004178573.1| tetratricopeptide repeat-containing protein [Isosphaera pallida ATCC
            43644]
 gi|319750264|gb|ADV62024.1| Tetratricopeptide TPR_1 repeat-containing protein [Isosphaera pallida
            ATCC 43644]
          Length = 1053

 Score = 56.7 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/140 (14%), Positives = 39/140 (27%), Gaps = 8/140 (5%)

Query: 47   YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
                   VR     Y K      +  F  A   +     +     +A ++ LM     + 
Sbjct: 911  EPSLTDPVRRAEATYAKGRALQGQARFDDARAAYQAVVANPNAGELAARAQLMLGETYFH 970

Query: 107  AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
              +Y+ A     +    Y          Y V  +Y + +  +           Q    ++
Sbjct: 971  QKQYEVALREYLKVEVLYDAPVWQALALYAVAQTY-ERLNQLDR-------ARQTYDELL 1022

Query: 167  ERYTNSPYVKGARFYVTVGR 186
            +R+  S     AR  +    
Sbjct: 1023 KRFPQSDRAVEARVRLETLN 1042



 Score = 52.0 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 63/224 (28%), Gaps = 57/224 (25%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YE  V   +   + +A +      +  P   +A ++L          G+++QAA+  E+ 
Sbjct: 502 YELGVNLYRLGRYDEAADALESYLKAVPETKIASQALAYLVMAHSRGGRFEQAAATLEQL 561

Query: 121 ITQYPESKNVDYV------------YYLVGMSYAQMIRDVPYDQRAT------------- 155
              +P S N+                Y    +    I D   DQ +              
Sbjct: 562 ARLHPNSNNLAVARVDLAERLYEAERYDQAEALFSPIAD---DQTSALRPQALSGRGWCR 618

Query: 156 ------KLMLQYMSRIVERYTNSP--------------------YVKGARFYVTVGR--- 186
                 +   +    +VE Y N P                            +       
Sbjct: 619 LKLDRPEEAARDFQILVETYANDPATPSNALILARTLQAIDRPNDALSVVDRLIERHPDF 678

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
           ++LA   +   R  LK      AI  ++  L  Y     A  A+
Sbjct: 679 DRLADARLLQARLNLKVDRPEQAIAAYRSFLTTYPGHPEAINAL 722



 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 67/200 (33%), Gaps = 26/200 (13%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A   L   +   A+  + +             S        Y  G+Y +AA   E Y
Sbjct: 466 YQLARAALAHNDPETAFAIWRELGST-EGHPYVAASRYELGVNLYRLGRYDEAADALESY 524

Query: 121 ITQYPESKNVDYVY-YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           +   PE+K       YLV M++++  R         +     + ++   + NS       
Sbjct: 525 LKAVPETKIASQALAYLV-MAHSRGGR--------FEQAAATLEQLARLHPNS------- 568

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             + V R  LA       R Y +   Y  A   F  +  +   +    +A++      + 
Sbjct: 569 NNLAVARVDLAE------RLY-EAERYDQAEALFSPIADD-QTSALRPQALSGRGWCRLK 620

Query: 240 LALMDEAREVVSLIQERYPQ 259
           L   +EA     ++ E Y  
Sbjct: 621 LDRPEEAARDFQILVETYAN 640



 Score = 43.2 bits (101), Expect = 0.042,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 64/200 (32%), Gaps = 16/200 (8%)

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY- 135
             Y +      P    A  + L +A + +  G + +A          +P S  +      
Sbjct: 371 AAYLSIVQTR-PDDPFAPDAQLRAAELAFQRGDHLEARRRAAALAVTFPTSSWIPAARLV 429

Query: 136 --LVGMSYAQ----------MIRDVPYDQRATKLMLQYMSR--IVERYTNSPYVKGARFY 181
                ++  Q          +I +   D    +     ++R  +      + +       
Sbjct: 430 EARAALASGQAEEAVTILTTLIENAQTDPALARAARYQLARAALAHNDPETAFAIWRELG 489

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
            T G   +AA   E+G    + G Y  A    +  L    + + A +A+A LV A+    
Sbjct: 490 STEGHPYVAASRYELGVNLYRLGRYDEAADALESYLKAVPETKIASQALAYLVMAHSRGG 549

Query: 242 LMDEAREVVSLIQERYPQGY 261
             ++A   +  +   +P   
Sbjct: 550 RFEQAAATLEQLARLHPNSN 569



 Score = 38.9 bits (90), Expect = 0.77,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 77/227 (33%), Gaps = 31/227 (13%)

Query: 64   AVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAA----SLG 117
              L L+  +   A +  +    D P     +AR++       ++ +           +L 
Sbjct: 805  GQLQLQAGDVEGATQTLDLLLNDQPPPPPELARQARFRLGEARFRSDNPASCRTVFEALL 864

Query: 118  EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI------VERYTN 171
            E+ +   P+  N      L  ++  ++I+    +QR  +  L  + R+        R   
Sbjct: 865  ED-LQSQPDDLNQPTNRLLWEVASLRLIQTDILEQR-WEAALAAIERLEPSLTDPVRRAE 922

Query: 172  SPYVK----GARFYVTVGR-------------NQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
            + Y K      +      R                A  ++ +G  Y  + +Y  A+  + 
Sbjct: 923  ATYAKGRALQGQARFDDARAAYQAVVANPNAGELAARAQLMLGETYFHQKQYEVALREYL 982

Query: 215  LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             V   Y        A+  + + Y  L  +D AR+    + +R+PQ  
Sbjct: 983  KVEVLYDAPVWQALALYAVAQTYERLNQLDRARQTYDELLKRFPQSD 1029


>gi|218688533|ref|YP_002396745.1| tol-pal system protein YbgF [Escherichia coli ED1a]
 gi|306812851|ref|ZP_07447044.1| tol-pal system protein YbgF [Escherichia coli NC101]
 gi|218426097|emb|CAR06915.1| putative RNA binding protein [Escherichia coli ED1a]
 gi|305853614|gb|EFM54053.1| tol-pal system protein YbgF [Escherichia coli NC101]
          Length = 263

 Score = 56.7 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 46/126 (36%), Gaps = 9/126 (7%)

Query: 61  YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A+  +++++    A   F    +++P +     +      + Y+ GK   AA     
Sbjct: 146 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       + VG+        +  D+  T        +++ +Y  +   K A+
Sbjct: 206 VVKNYPKSPKAADAMFKVGV--------IMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257

Query: 180 FYVTVG 185
             +   
Sbjct: 258 KRLNAM 263



 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      ++ Y +S Y+  A +++               
Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLN----------- 190

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
                +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 191 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 247

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 248 PGTDGAKQAQK 258



 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I  YP+S  +    Y +G       +              Y + +V+ Y 
Sbjct: 160 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A F V V                  +G+   A   +Q V++ Y   + A++A 
Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257

Query: 231 ARL 233
            RL
Sbjct: 258 KRL 260


>gi|157273540|gb|ABV27439.1| probable soluble lytic transglycosylase [Candidatus
           Chloracidobacterium thermophilum]
          Length = 801

 Score = 56.7 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 52/120 (43%), Gaps = 8/120 (6%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
               +    ++     F  E+N+ +A  +F++  R++P +    K    +     +AG+Y
Sbjct: 284 PPVAQRAEALWSLGRAFFIEENWDEAVRWFDRAHREYPTSPEGEKGYYQAGHALQNAGRY 343

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           ++A +  E +I  YP+S+ +       G ++   I D        K  L++  R  +R+ 
Sbjct: 344 REAVARYEAFIAAYPDSEFI-------GGAHLNAI-DALRLAGDFKAALEWCDRAEKRFP 395



 Score = 39.3 bits (91), Expect = 0.59,   Method: Composition-based stats.
 Identities = 18/183 (9%), Positives = 46/183 (25%), Gaps = 63/183 (34%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
            T    ++  Y+          + +A   +      +P +     + L +      AG +
Sbjct: 321 PTSPEGEKGYYQAGHALQNAGRYREAVARYEAFIAAYPDSEFIGGAHLNAIDALRLAGDF 380

Query: 111 QQAASLGEE---------------------YIT------------------QY---PESK 128
           + A    +                      +++                   +   P S 
Sbjct: 381 KAALEWCDRAEKRFPRELVGVTARFQRAKIFMSQGNWRAALSVLEDMQRLPLHRRGPGST 440

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY---TNSP---YVKGARFYV 182
           +   V +L G+   ++ R                +  +E Y    ++    Y + A   +
Sbjct: 441 DASEVTFLRGLCLERLER---------------FAEAIEVYLSLPDTRTSYYGQQATERL 485

Query: 183 TVG 185
              
Sbjct: 486 LAL 488


>gi|83950086|ref|ZP_00958819.1| hypothetical protein ISM_03290 [Roseovarius nubinhibens ISM]
 gi|83837985|gb|EAP77281.1| hypothetical protein ISM_03290 [Roseovarius nubinhibens ISM]
          Length = 268

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 46/135 (34%), Gaps = 20/135 (14%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           ++  +++A   L   N +KA E F+     +P   ++ ++ ++      + G    AA  
Sbjct: 145 EQSDFDRAKAELDAGNTAKAAELFSAFQTAYPGGPLSGQAGVLRGQALEAEGDLTGAARA 204

Query: 117 G------EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
                  +       E        Y +G       R +      T      ++ + ERY 
Sbjct: 205 YLDTFSADR------EGPAASTALYRLG-------RTLGRI-GQTNEACVTLTEVGERYP 250

Query: 171 NSPYVKGARFYVTVG 185
            SP V  A+  +   
Sbjct: 251 GSPAVAEAQGTMAEL 265


>gi|291569283|dbj|BAI91555.1| TPR domain protein [Arthrospira platensis NIES-39]
          Length = 847

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 67/231 (29%), Gaps = 50/231 (21%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV----------YEKAVLFLKEQN 72
            +     IAV  +  +   S+ +    S T  +Y R +          Y + +   ++ N
Sbjct: 379 LVICLVGIAVVGVNTFRDNSTTEPTARSDTSSQYNRPLEIDINDATVYYSRGLTHRRQGN 438

Query: 73  FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
           +  A   +N+     P    A  +     F     G Y+ A +     I   P   N   
Sbjct: 439 YEAAIADYNRAIEINP--NYA-LAYNNRGFAHRRQGNYEAAIADYNRAIEINP---NYAL 492

Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
            Y   G ++          Q   +  +   +R +E   N  Y         +   +    
Sbjct: 493 AYNNRGFAH--------RRQGNYEAAIADYNRAIEINPN--YALAYNGR-GLTHRRQGNY 541

Query: 193 EVEIGRY-------------YLKR-------GEYVAAI---PRFQLVLANY 220
           E  I  Y             Y  R       G Y AAI    R   +  NY
Sbjct: 542 EAAIADYNRAIEINPNYALAYNNRGFAHRRQGNYEAAIADYNRAIEINPNY 592



 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 50/182 (27%), Gaps = 40/182 (21%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            +     ++ N+  A   +N+     P    A  +     F     G Y+ A +     I
Sbjct: 462 NRGFAHRRQGNYEAAIADYNRAIEINP--NYA-LAYNNRGFAHRRQGNYEAAIADYNRAI 518

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              P   N    Y   G+++          Q   +  +   +R +E   N  Y       
Sbjct: 519 EINP---NYALAYNGRGLTH--------RRQGNYEAAIADYNRAIEINPN--YALAYNNR 565

Query: 182 VTVGRNQLAAKEVEIGRY-------------YLKRG-------EYVAAI---PRFQLVLA 218
                 +    E  I  Y             Y  RG        Y AAI    R   +  
Sbjct: 566 -GFAHRRQGNYEAAIADYNRAIEINPNYALAYNNRGFAHRSQGNYKAAIADYNRAIEINP 624

Query: 219 NY 220
           NY
Sbjct: 625 NY 626



 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 49/181 (27%), Gaps = 40/181 (22%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           + +   ++ N+  A   +N+     P    A  +     F     G Y+ A +     I 
Sbjct: 531 RGLTHRRQGNYEAAIADYNRAIEINP--NYA-LAYNNRGFAHRRQGNYEAAIADYNRAIE 587

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
             P   N    Y   G ++          Q   K  +   +R +E   N      A    
Sbjct: 588 INP---NYALAYNNRGFAH--------RSQGNYKAAIADYNRAIEINPN---YHNAYNNR 633

Query: 183 TVGRNQLAAKEVEIGRY-------------YLKRG-------EYVAAI---PRFQLVLAN 219
                     E  I  Y             Y  RG        Y AAI    R   +  N
Sbjct: 634 GFAHRSQGNYEAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNYKAAIADYNRAIEINPN 693

Query: 220 Y 220
           Y
Sbjct: 694 Y 694



 Score = 51.7 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 57/207 (27%), Gaps = 44/207 (21%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            +      + N+  A   +N+     P       +     F   S G Y+ A +     I
Sbjct: 632 NRGFAHRSQGNYEAAIADYNRAIEINP--NY-HNAYNNRGFAHRSQGNYKAAIADYNRAI 688

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              P   N    Y   G ++          Q   +  +   +R +E   N  Y       
Sbjct: 689 EINPNYHN---AYNNRGFAH--------RSQGNYEAAIADYNRAIEINPN--YALAYNGR 735

Query: 182 VTVGRNQLAAKEVEIGRY-------------YLKRG-------EYVAAIPRFQLVLANYS 221
             +   +    E  I  Y             Y  RG        Y AAI  +   +    
Sbjct: 736 -GLTHRRQGNYEAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNYEAAIADYNRAIEINP 794

Query: 222 DAEHAEEAMARL--VEAYVALALMDEA 246
           +      A+A     +AY  L    +A
Sbjct: 795 NY-----ALAYKNRGDAYKVLGEKQKA 816



 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 48/182 (26%), Gaps = 40/182 (21%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            +      + N+  A   +N+     P       +     F   S G Y+ A +     I
Sbjct: 598 NRGFAHRSQGNYKAAIADYNRAIEINP--NY-HNAYNNRGFAHRSQGNYEAAIADYNRAI 654

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              P   N    Y   G ++          Q   K  +   +R +E   N      A   
Sbjct: 655 EINPNYHN---AYNNRGFAH--------RSQGNYKAAIADYNRAIEINPN---YHNAYNN 700

Query: 182 VTVGRNQLAAKEVEIGRY---------YL-----------KRGEYVAAI---PRFQLVLA 218
                      E  I  Y         Y            ++G Y AAI    R   +  
Sbjct: 701 RGFAHRSQGNYEAAIADYNRAIEINPNYALAYNGRGLTHRRQGNYEAAIADYNRAIEINP 760

Query: 219 NY 220
           NY
Sbjct: 761 NY 762



 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 49/182 (26%), Gaps = 40/182 (21%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            +     ++ N+  A   +N+     P    A  +     F   S G Y+ A +     I
Sbjct: 564 NRGFAHRRQGNYEAAIADYNRAIEINP--NYA-LAYNNRGFAHRSQGNYKAAIADYNRAI 620

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              P   N    Y   G ++          Q   +  +   +R +E   N      A   
Sbjct: 621 EINPNYHN---AYNNRGFAH--------RSQGNYEAAIADYNRAIEINPN---YHNAYNN 666

Query: 182 VTVGRNQLAAKEVEIGRY-------------YLKRG-------EYVAAI---PRFQLVLA 218
                      +  I  Y             Y  RG        Y AAI    R   +  
Sbjct: 667 RGFAHRSQGNYKAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNYEAAIADYNRAIEINP 726

Query: 219 NY 220
           NY
Sbjct: 727 NY 728



 Score = 43.2 bits (101), Expect = 0.035,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 48/166 (28%), Gaps = 30/166 (18%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF-----VQYSAGKYQQAASL 116
            +      + N+  A   +N+     P    A       A+          G Y+ A + 
Sbjct: 700 NRGFAHRSQGNYEAAIADYNRAIEINP--NYA------LAYNGRGLTHRRQGNYEAAIAD 751

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS--PY 174
               I   P   N    Y   G ++          Q   +  +   +R +E   N    Y
Sbjct: 752 YNRAIEINPNYHN---AYNNRGFAH--------RSQGNYEAAIADYNRAIEINPNYALAY 800

Query: 175 VKGARFYVTVGRNQLAAKEVE-IGRYYLKRGE---YVAAIPRFQLV 216
                 Y  +G  Q A  + +     Y K+     Y  A+   + +
Sbjct: 801 KNRGDAYKVLGEKQKAGSDWQTAANLYRKQDNNAGYQGAMNSLRSL 846


>gi|126733591|ref|ZP_01749338.1| hypothetical protein RCCS2_05529 [Roseobacter sp. CCS2]
 gi|126716457|gb|EBA13321.1| hypothetical protein RCCS2_05529 [Roseobacter sp. CCS2]
          Length = 271

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 18/132 (13%), Positives = 40/132 (30%), Gaps = 24/132 (18%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK--------YQQA 113
           E+A   L   +F  A +        +P + +            Y  G+         + A
Sbjct: 153 ERAQGALASGDFRSAVDQLTAFVTTYPGSPLTT-------DANYLKGEALEGLGDTTEAA 205

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
            +  E +    P         + +G S  ++          T+     ++ +  R+  +P
Sbjct: 206 RAYLEAFSGD-PTGPKAPDALFKLGSSLGKI--------GQTQDACLTLAEVNVRFPGNP 256

Query: 174 YVKGARFYVTVG 185
            V  A+  +   
Sbjct: 257 AVVDAQTEMQAL 268



 Score = 40.1 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 17/129 (13%), Positives = 39/129 (30%), Gaps = 20/129 (15%)

Query: 138 GMSYAQMIRDVPYDQRA-----TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
            ++  +   D+   Q A      +  +  ++  V  Y  SP    A +        L   
Sbjct: 143 ALAIGEQT-DIERAQGALASGDFRSAVDQLTAFVTTYPGSPLTTDANYLKGEALEGL--- 198

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
                      G+   A   +    +       A +A+ +L  +   +    +A   ++ 
Sbjct: 199 -----------GDTTEAARAYLEAFSGDPTGPKAPDALFKLGSSLGKIGQTQDACLTLAE 247

Query: 253 IQERYPQGY 261
           +  R+P   
Sbjct: 248 VNVRFPGNP 256


>gi|330811385|ref|YP_004355847.1| hypothetical protein PSEBR_c2g93 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327379493|gb|AEA70843.1| Conserved hypothetical protein; putative exported protein
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 279

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 47/128 (36%), Gaps = 8/128 (6%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D   ++  Y+ A   +K ++F KA + F    R +P +  A  +      V  + G  Q 
Sbjct: 155 DPAKEKLYYDAAFDLIKAKDFDKASQAFAAFLRKYPNSQYAGNAQYWLGEVNLAKGDLQG 214

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A     +    YP+   V    Y +         DV      T  +   + ++V +Y  +
Sbjct: 215 AGQAFAKVSQLYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQYPGT 266

Query: 173 PYVKGARF 180
              + A+ 
Sbjct: 267 SAAQLAQR 274



 Score = 49.0 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
             +I+   +D        Q  +  + +Y NS Y   A++++      LA  +++      
Sbjct: 167 FDLIKAKDFD-----KASQAFAAFLRKYPNSQYAGNAQYWLGEVN--LAKGDLQ------ 213

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
                  A   F  V   Y       +++ +L +    L   D+ + ++  +  +YP   
Sbjct: 214 ------GAGQAFAKVSQLYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 267

Query: 262 WARYVETLVK 271
            A+  +  ++
Sbjct: 268 AAQLAQRDLQ 277


>gi|291612992|ref|YP_003523149.1| tol-pal system protein YbgF [Sideroxydans lithotrophicus ES-1]
 gi|291583104|gb|ADE10762.1| tol-pal system protein YbgF [Sideroxydans lithotrophicus ES-1]
          Length = 251

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/151 (12%), Positives = 44/151 (29%), Gaps = 8/151 (5%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
            G    +  D    +      +   ++ A  F K +N+  A   F    +++P +     
Sbjct: 109 AGGTTSAPADSGTGAAAGQGGEERAFDAAYSFYKAENYQNAVTAFGGFLKNYPQSAHEAN 168

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
            L       +    Y+   S  E    +YP+   V                +     R  
Sbjct: 169 VLYWMGNSYFLLKDYKSCVSSYESLAGKYPDHPRVAE--------TMLNTAECQLGLRNK 220

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
               + +  ++ ++  S     A+  +   +
Sbjct: 221 TAAKRTLKLLISKFPGSDASDKAKKRLAAIK 251



 Score = 52.8 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 51/136 (37%), Gaps = 22/136 (16%)

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
            +A+  Y A  YQ A +    ++  YP+S +   V Y +G SY  +        +  K  
Sbjct: 135 DAAYSFYKAENYQNAVTAFGGFLKNYPQSAHEANVLYWMGNSYFLL--------KDYKSC 186

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
           +     +  +Y + P V          +  L  K               AA    +L+++
Sbjct: 187 VSSYESLAGKYPDHPRVAETMLNTAECQLGLRNK--------------TAAKRTLKLLIS 232

Query: 219 NYSDAEHAEEAMARLV 234
            +  ++ +++A  RL 
Sbjct: 233 KFPGSDASDKAKKRLA 248



 Score = 44.3 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 14/116 (12%), Positives = 36/116 (31%), Gaps = 14/116 (12%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              +  +      ++ Y  S +     +++              G  Y    +Y + +  
Sbjct: 144 ENYQNAVTAFGGFLKNYPQSAHEANVLYWM--------------GNSYFLLKDYKSCVSS 189

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           ++ +   Y D     E M    E  + L     A+  + L+  ++P    +   + 
Sbjct: 190 YESLAGKYPDHPRVAETMLNTAECQLGLRNKTAAKRTLKLLISKFPGSDASDKAKK 245


>gi|215485764|ref|YP_002328195.1| tol-pal system protein YbgF [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312965178|ref|ZP_07779415.1| tol-pal system protein YbgF [Escherichia coli 2362-75]
 gi|215263836|emb|CAS08174.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
 gi|312290269|gb|EFR18152.1| tol-pal system protein YbgF [Escherichia coli 2362-75]
          Length = 263

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 46/126 (36%), Gaps = 9/126 (7%)

Query: 61  YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A+  +++++    A   F    +++P +     +      + Y+ GK   AA     
Sbjct: 146 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       + VG+        +  D+  T        +++ +Y  +   K A+
Sbjct: 206 VVKNYPKSPKAADAMFKVGV--------IMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257

Query: 180 FYVTVG 185
             +   
Sbjct: 258 KRLNAM 263



 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      ++ Y +S Y+  A +++               
Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLN----------- 190

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
                +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 191 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 247

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 248 PGTDGAKQAQK 258



 Score = 49.3 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I  YP+S  +    Y +G       +              Y + +V+ Y 
Sbjct: 160 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A F V V                  +G+   A   +Q V++ Y   + A++A 
Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257

Query: 231 ARL 233
            RL
Sbjct: 258 KRL 260


>gi|91209777|ref|YP_539763.1| tol-pal system protein YbgF [Escherichia coli UTI89]
 gi|110640950|ref|YP_668678.1| tol-pal system protein YbgF [Escherichia coli 536]
 gi|117622933|ref|YP_851846.1| hypothetical protein APECO1_1339 [Escherichia coli APEC O1]
 gi|218557655|ref|YP_002390568.1| tol-pal system protein YbgF [Escherichia coli S88]
 gi|227884291|ref|ZP_04002096.1| tol-pal system protein YbgF [Escherichia coli 83972]
 gi|237707295|ref|ZP_04537776.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|300992343|ref|ZP_07179866.1| tol-pal system protein YbgF [Escherichia coli MS 200-1]
 gi|300993168|ref|ZP_07180251.1| tol-pal system protein YbgF [Escherichia coli MS 45-1]
 gi|301051338|ref|ZP_07198161.1| tol-pal system protein YbgF [Escherichia coli MS 185-1]
 gi|331682172|ref|ZP_08382794.1| putative tol-pal system protein YbgF [Escherichia coli H299]
 gi|91071351|gb|ABE06232.1| hypothetical protein UTI89_C0739 [Escherichia coli UTI89]
 gi|110342542|gb|ABG68779.1| putative exported protein [Escherichia coli 536]
 gi|115512057|gb|ABJ00132.1| conserved hypothetical protein [Escherichia coli APEC O1]
 gi|218364424|emb|CAR02104.1| putative RNA binding protein [Escherichia coli S88]
 gi|226898505|gb|EEH84764.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|227839043|gb|EEJ49509.1| tol-pal system protein YbgF [Escherichia coli 83972]
 gi|294493984|gb|ADE92740.1| tol-pal system protein YbgF [Escherichia coli IHE3034]
 gi|300297000|gb|EFJ53385.1| tol-pal system protein YbgF [Escherichia coli MS 185-1]
 gi|300305360|gb|EFJ59880.1| tol-pal system protein YbgF [Escherichia coli MS 200-1]
 gi|300406698|gb|EFJ90236.1| tol-pal system protein YbgF [Escherichia coli MS 45-1]
 gi|307552593|gb|ADN45368.1| tol-pal system protein YbgF [Escherichia coli ABU 83972]
 gi|315292656|gb|EFU52008.1| tol-pal system protein YbgF [Escherichia coli MS 153-1]
 gi|323191087|gb|EFZ76352.1| tol-pal system protein YbgF [Escherichia coli RN587/1]
 gi|323953132|gb|EGB48999.1| tol-pal system protein YbgF [Escherichia coli H252]
 gi|323958486|gb|EGB54192.1| tol-pal system protein YbgF [Escherichia coli H263]
 gi|331080596|gb|EGI51772.1| putative tol-pal system protein YbgF [Escherichia coli H299]
          Length = 263

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 46/126 (36%), Gaps = 9/126 (7%)

Query: 61  YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A+  +++++    A   F    +++P +     +      + Y+ GK   AA     
Sbjct: 146 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       + VG+        +  D+  T        +++ +Y  +   K A+
Sbjct: 206 VVKNYPKSPKAADAMFKVGV--------IMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257

Query: 180 FYVTVG 185
             +   
Sbjct: 258 KRLNAM 263



 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      ++ Y +S Y+  A +++               
Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLN----------- 190

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
                +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 191 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 247

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 248 PGTDGAKQAQK 258



 Score = 49.3 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I  YP+S  +    Y +G       +              Y + +V+ Y 
Sbjct: 160 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A F V V                  +G+   A   +Q V++ Y   + A++A 
Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257

Query: 231 ARL 233
            RL
Sbjct: 258 KRL 260


>gi|171058625|ref|YP_001790974.1| tol-pal system protein YbgF [Leptothrix cholodnii SP-6]
 gi|170776070|gb|ACB34209.1| tol-pal system protein YbgF [Leptothrix cholodnii SP-6]
          Length = 283

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 48/137 (35%), Gaps = 8/137 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
             T    +++ Y+ A+  L++  F+KA E      R FP +             QY  G+
Sbjct: 155 EATVDAGEKKAYDDAIGILRKGEFAKAAEALQGFQRRFPSSPYNGHVQYWLGNAQYGKGE 214

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            ++AA      ++  P+                  + +   + +  K   + +  +V+ Y
Sbjct: 215 VKEAAQTFRTLVSNAPDHP--------RAAEALLALANCQVELKDPKAARKSLDELVKNY 266

Query: 170 TNSPYVKGARFYVTVGR 186
             S   +  R  +   +
Sbjct: 267 PQSEAAQAGRERLAKLK 283



 Score = 45.1 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 43/130 (33%), Gaps = 22/130 (16%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
             G++ +AA   + +  ++P S    +V Y +G +               K   Q    +
Sbjct: 174 RKGEFAKAAEALQGFQRRFPSSPYNGHVQYWLGNAQYGK--------GEVKEAAQTFRTL 225

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           V    + P    A   +   + +L               +  AA      ++ NY  +E 
Sbjct: 226 VSNAPDHPRAAEALLALANCQVEL--------------KDPKAARKSLDELVKNYPQSEA 271

Query: 226 AEEAMARLVE 235
           A+    RL +
Sbjct: 272 AQAGRERLAK 281



 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 40/105 (38%), Gaps = 14/105 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              + +     R+ +SPY    ++++   +                +GE   A   F+ +
Sbjct: 180 KAAEALQGFQRRFPSSPYNGHVQYWLGNAQ--------------YGKGEVKEAAQTFRTL 225

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           ++N  D   A EA+  L    V L     AR+ +  + + YPQ  
Sbjct: 226 VSNAPDHPRAAEALLALANCQVELKDPKAARKSLDELVKNYPQSE 270


>gi|158520052|ref|YP_001527922.1| SpoIID/LytB domain-containing protein [Desulfococcus oleovorans
           Hxd3]
 gi|158508878|gb|ABW65845.1| SpoIID/LytB domain [Desulfococcus oleovorans Hxd3]
          Length = 508

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 42/114 (36%), Gaps = 9/114 (7%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS-AGKYQQAASLGE 118
           ++ +A   +    + +A   +   +   P AG   ++LL+  +       ++ +A    +
Sbjct: 20  LFAQAETQVAAGRYLEAIGLYQTVADTTPDAGEKARALLLVGYAHAQYLDQHDKALLYFD 79

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
             +T +P S   +   Y  GM   +  R             Q  +   ERY ++
Sbjct: 80  YILTNWPGSAAAEEALYRKGMVLYETERYA--------KAYQAFTAYQERYPHT 125


>gi|225076465|ref|ZP_03719664.1| hypothetical protein NEIFLAOT_01511 [Neisseria flavescens
           NRL30031/H210]
 gi|224952144|gb|EEG33353.1| hypothetical protein NEIFLAOT_01511 [Neisseria flavescens
           NRL30031/H210]
          Length = 251

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 49/132 (37%), Gaps = 13/132 (9%)

Query: 50  SVTDVRYQREV--YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           S TD   Q E+  Y +A  + +  NFS A     +       + +AR+++ +    Q   
Sbjct: 123 SETDSAAQNELRLYNQAQKYYQRNNFSAAVAILKEADGGN-GSEIARRNMYLLLQSQQRL 181

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIV 166
           G  +    +G  Y  ++  S       Y +G    +   +D+               +++
Sbjct: 182 GNCESVIEIGNRYANRFRNSPQAPDAMYSIGQCQYKLQQKDIAR---------STWRKLI 232

Query: 167 ERYTNSPYVKGA 178
           + + NS   K A
Sbjct: 233 QSFPNSEAAKRA 244



 Score = 40.9 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 19/150 (12%), Positives = 42/150 (28%), Gaps = 48/150 (32%)

Query: 170 TNSPYVKGARFYVTVG---------RNQLAAKEVEI---GRYYLKRGEYVAA-------- 209
             +  +   +  +             +  A  E+ +    + Y +R  + AA        
Sbjct: 100 PQAQRLDDRKLKMNYLANGGSVLSETDSAAQNELRLYNQAQKYYQRNNFSAAVAILKEAD 159

Query: 210 ------IPR---------------FQLVLA-------NYSDAEHAEEAMARLVEAYVALA 241
                 I R                + V+         + ++  A +AM  + +    L 
Sbjct: 160 GGNGSEIARRNMYLLLQSQQRLGNCESVIEIGNRYANRFRNSPQAPDAMYSIGQCQYKLQ 219

Query: 242 LMDEAREVVSLIQERYPQGYWARYVETLVK 271
             D AR     + + +P    A+     +K
Sbjct: 220 QKDIARSTWRKLIQSFPNSEAAKRASISIK 249


>gi|108757885|ref|YP_630166.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622]
 gi|108461765|gb|ABF86950.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622]
          Length = 1111

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/224 (14%), Positives = 71/224 (31%), Gaps = 35/224 (15%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           ++ A   + E  + +A   + +   + P    A K+L  +A    +  ++  A  L E  
Sbjct: 689 FKLADQLMAESKYEEAAAKYIELVDESPRHEFADKALNNAAVAHENTRRFDSALKLYERI 748

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP------- 173
             +YP S       + V +          +D       +    ++V+ Y +S        
Sbjct: 749 YREYPSSPLAGGALFRVAV---NAENSYDFD-----KAVVSYQKLVKDYPDSKDREAALF 800

Query: 174 -----------YVKGARFYVTVG-----RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
                      Y + A  ++               +      Y K+G     +   Q  +
Sbjct: 801 NAARLLEGQQRYPEAAAAFMRYADLFPKAEDAPKNQYRAAIIYEKQGNPRGEVRALQEFV 860

Query: 218 ANY-SDAEHAE---EAMARLVEAYVALALMDEAREVVSLIQERY 257
             + S +   E   +A  R+ +A+  L    +A+   +     +
Sbjct: 861 RKFASQSGQVELVVDAHRRMGDAHQKLGSTRDAQNAWARSAAEF 904



 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 52/134 (38%), Gaps = 12/134 (8%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++  AV      +F KA   + +  +D+P +     +L  +A +     +Y +AA+    
Sbjct: 762 LFRVAVNAENSYDFDKAVVSYQKLVKDYPDSKDREAALFNAARLLEGQQRYPEAAAAFMR 821

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY-TNS---PYV 175
           Y   +P++++     Y   + Y +        Q   +  ++ +   V ++ + S     V
Sbjct: 822 YADLFPKAEDAPKNQYRAAIIYEK--------QGNPRGEVRALQEFVRKFASQSGQVELV 873

Query: 176 KGARFYVTVGRNQL 189
             A   +     +L
Sbjct: 874 VDAHRRMGDAHQKL 887



 Score = 42.4 bits (99), Expect = 0.071,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 51/208 (24%), Gaps = 58/208 (27%)

Query: 75  KAYEYFNQCSRDFPFAG-VARKSLLMSAFVQYS--AGKYQQAASLGEEYITQY------- 124
            A   F +  R +P         +   A + Y   +  +  A     E +  +       
Sbjct: 101 DAIARFEEFLRRYPTEPRFTPDVMFRLAELYYERSSDDHLLAMKDYAERLEAHDKNPDAE 160

Query: 125 -PESKNVDYV----YYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVERY 169
            P    VDY      Y   ++     R               Q      L    +++ RY
Sbjct: 161 FPTEPRVDYAPSIALYRKLLATFPDYRLNDGAWYLLAYCLEKQDQYGDSLHAYQQLIARY 220

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR-----------GEYVAAIPRFQLVLA 218
             S +   +                 IG Y+                Y AA         
Sbjct: 221 PQSRFATESWVR--------------IGEYWFDNYEDPQALPKAAQAYEAATRDASH--- 263

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEA 246
                   ++A+ +L   Y  L   + A
Sbjct: 264 -----PLYDKALYKLGWTYYRLDRFEPA 286



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 54/201 (26%), Gaps = 28/201 (13%)

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG--------- 138
           P    A      +A + YS   + +A    E  I  YP  +   Y   L           
Sbjct: 594 PAGEKAPGIAYQAAELHYSHDDFPEARRRFETIIQAYPSHEVARYATNLTIETFLIDEDW 653

Query: 139 ---------MSYAQMIRDVPYD---QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
                    ++    + D   D   Q     +        +    S Y + A        
Sbjct: 654 RSVESVSARLASNDKVIDPSSDLHKQLVKFKLAGRFKLADQLMAESKY-EEAAAKYIELV 712

Query: 187 NQLAAKEV------EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
           ++    E            +     + +A+  ++ +   Y  +  A  A+ R+       
Sbjct: 713 DESPRHEFADKALNNAAVAHENTRRFDSALKLYERIYREYPSSPLAGGALFRVAVNAENS 772

Query: 241 ALMDEAREVVSLIQERYPQGY 261
              D+A      + + YP   
Sbjct: 773 YDFDKAVVSYQKLVKDYPDSK 793



 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 74/235 (31%), Gaps = 48/235 (20%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA-SLGEEYI--TQYP 125
           K+  +  +   + Q    +P +  A +S +      +   +  QA     + Y   T+  
Sbjct: 202 KQDQYGDSLHAYQQLIARYPQSRFATESWVRIGEYWFDNYEDPQALPKAAQAYEAATRDA 261

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK-GA------ 178
                D   Y +G +Y ++ R         +  +     +VE Y      K  A      
Sbjct: 262 SHPLYDKALYKLGWTYYRLDR--------FEPAVASFLTLVEFYEAQRVAKGDATAGGDL 313

Query: 179 -RFYVTVGRNQLAA--------------------KEVEI----GRYYLKRGEYVAAIPRF 213
               +      LA                      E E+    G  Y  + ++  AI  +
Sbjct: 314 REEALQYVAISLADDTWGGIARADALFAERGPRPYEAEVYQRLGNVYFDQTKHAPAIEAY 373

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVA---LALMDEAREVVSLIQERYPQGYWARY 265
           + VL    DA  A     R+V+AY     L L     E ++ + +  P G W   
Sbjct: 374 RRVLQKAPDAPDAPMVQQRIVQAYERDRMLGLSFAESEALANLYQ--PGGAWYEK 426



 Score = 35.9 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 50/151 (33%), Gaps = 20/151 (13%)

Query: 137 VGMSYAQMIRDVPYDQRATK-LMLQYMSRIVERYTNSP-YVKGARFYVTVGR-------N 187
           +  SY + I+D+   +R  +   +      + RY   P +     F +           +
Sbjct: 80  LAASYEKRIKDLEAQERRERLDAIARFEEFLRRYPTEPRFTPDVMFRLAELYYERSSDDH 139

Query: 188 QLAAKEVEI----------GRYYLK-RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
            LA K+               +  + R +Y  +I  ++ +LA + D    + A   L   
Sbjct: 140 LLAMKDYAERLEAHDKNPDAEFPTEPRVDYAPSIALYRKLLATFPDYRLNDGAWYLLAYC 199

Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYVE 267
                   ++      +  RYPQ  +A    
Sbjct: 200 LEKQDQYGDSLHAYQQLIARYPQSRFATESW 230


>gi|218704069|ref|YP_002411588.1| tol-pal system protein YbgF [Escherichia coli UMN026]
 gi|293403997|ref|ZP_06647991.1| hypothetical protein ECGG_02377 [Escherichia coli FVEC1412]
 gi|298379777|ref|ZP_06989382.1| hypothetical protein ECFG_02574 [Escherichia coli FVEC1302]
 gi|300900749|ref|ZP_07118898.1| tol-pal system protein YbgF [Escherichia coli MS 198-1]
 gi|218431166|emb|CAR12042.1| putative RNA binding protein [Escherichia coli UMN026]
 gi|291428583|gb|EFF01608.1| hypothetical protein ECGG_02377 [Escherichia coli FVEC1412]
 gi|298279475|gb|EFI20983.1| hypothetical protein ECFG_02574 [Escherichia coli FVEC1302]
 gi|300355808|gb|EFJ71678.1| tol-pal system protein YbgF [Escherichia coli MS 198-1]
          Length = 263

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 49/156 (31%), Gaps = 9/156 (5%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89
           +           +      +          Y  A+  +++++    A   F    +++P 
Sbjct: 116 SGAAASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPD 175

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +     +      + Y+ GK   AA      +  YP+S       + VG+        + 
Sbjct: 176 STYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGV--------IM 227

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            D+  T        +++ +Y  +   K A+  +   
Sbjct: 228 QDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM 263



 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      ++ Y +S Y+  A +++               
Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLN----------- 190

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
                +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 191 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 247

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 248 PGTDGAKQAQK 258



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I  YP+S  +    Y +G       +              Y + +V+ Y 
Sbjct: 160 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A F V V                  +G+   A   +Q V++ Y   + A++A 
Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257

Query: 231 ARL 233
            RL
Sbjct: 258 KRL 260


>gi|218699114|ref|YP_002406743.1| tol-pal system protein YbgF [Escherichia coli IAI39]
 gi|293409126|ref|ZP_06652702.1| conserved hypothetical protein [Escherichia coli B354]
 gi|293414027|ref|ZP_06656676.1| hypothetical protein ECDG_00576 [Escherichia coli B185]
 gi|331651750|ref|ZP_08352769.1| putative tol-pal system protein YbgF [Escherichia coli M718]
 gi|218369100|emb|CAR16854.1| putative RNA binding protein [Escherichia coli IAI39]
 gi|291434085|gb|EFF07058.1| hypothetical protein ECDG_00576 [Escherichia coli B185]
 gi|291469594|gb|EFF12078.1| conserved hypothetical protein [Escherichia coli B354]
 gi|331050028|gb|EGI22086.1| putative tol-pal system protein YbgF [Escherichia coli M718]
          Length = 263

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 49/156 (31%), Gaps = 9/156 (5%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89
           +           +      +          Y  A+  +++++    A   F    +++P 
Sbjct: 116 SGAAASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPD 175

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +     +      + Y+ GK   AA      +  YP+S       + VG+        + 
Sbjct: 176 STYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGV--------IM 227

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            D+  T        +++ +Y  +   K A+  +   
Sbjct: 228 QDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM 263



 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      ++ Y +S Y+  A +++               
Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLN----------- 190

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
                +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 191 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 247

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 248 PGTDGAKQAQK 258



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I  YP+S  +    Y +G       +              Y + +V+ Y 
Sbjct: 160 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A F V V                  +G+   A   +Q V++ Y   + A++A 
Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257

Query: 231 ARL 233
            RL
Sbjct: 258 KRL 260


>gi|82543169|ref|YP_407116.1| tol-pal system protein YbgF [Shigella boydii Sb227]
 gi|81244580|gb|ABB65288.1| conserved hypothetical protein [Shigella boydii Sb227]
 gi|332760889|gb|EGJ91177.1| tol-pal system protein YbgF [Shigella flexneri 4343-70]
 gi|333007800|gb|EGK27276.1| tol-pal system protein YbgF [Shigella flexneri K-218]
          Length = 263

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 49/156 (31%), Gaps = 9/156 (5%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89
           +           +      +          Y  A+  +++++    A   F    +++P 
Sbjct: 116 SGATASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPD 175

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +     +      + Y+ GK   AA      +  YP+S       + VG+        + 
Sbjct: 176 STYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGV--------IM 227

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            D+  T        +++ +Y  +   K A+  +   
Sbjct: 228 QDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM 263



 Score = 51.3 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      ++ Y +S Y+  A +++               
Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLN----------- 190

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
                +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 191 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 247

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 248 PGTDGAKQAQK 258



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I  YP+S  +    Y +G       +              Y + +V+ Y 
Sbjct: 160 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A F V V                  +G+   A   +Q V++ Y   + A++A 
Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257

Query: 231 ARL 233
            RL
Sbjct: 258 KRL 260


>gi|224537598|ref|ZP_03678137.1| hypothetical protein BACCELL_02478 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224520795|gb|EEF89900.1| hypothetical protein BACCELL_02478 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 1010

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 34/73 (46%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
             +YEK   +++  N  +A   F +    +P + V+RK+      + Y   +Y +A    
Sbjct: 629 NALYEKGRSYVQTSNSRQAIAAFKELLDKYPESPVSRKAAAEIGLLYYQNDEYDRAIDAY 688

Query: 118 EEYITQYPESKNV 130
           +  +TQYP S+  
Sbjct: 689 KHVVTQYPGSEEA 701



 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 77/221 (34%), Gaps = 28/221 (12%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYE---YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
             Y    Y  A +   E++++ A      F Q  +      +A  +          A ++
Sbjct: 514 ETYALAYYNLAYIAFHEKDYTLAQNRFLKFTQLEKGENPTALA-DAYNRIGDCYLHARRF 572

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
            +A     +       +   DY +Y + +        V   Q+     +  ++R+  +Y 
Sbjct: 573 DEAKQYYTKAENM--GTPAGDYSFYQLAL--------VAGLQKDYDGKVALLNRMANKYP 622

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
           +SPY            N L  K    GR Y++      AI  F+ +L  Y ++  + +A 
Sbjct: 623 SSPYT----------INALYEK----GRSYVQTSNSRQAIAAFKELLDKYPESPVSRKAA 668

Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           A +   Y      D A +    +  +YP    AR     +K
Sbjct: 669 AEIGLLYYQNDEYDRAIDAYKHVVTQYPGSEEARLAMRDLK 709



 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 36/282 (12%), Positives = 78/282 (27%), Gaps = 73/282 (25%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAY---------------------------------- 77
            ++   + +Y++     +++ ++ A                                   
Sbjct: 26  ENITSPQRLYQEGQSLFQQKAYAAAIPPLQAFVRQIDAEGKPLPVAGERMEAEYMLVCAA 85

Query: 78  ------EYFNQCS---RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
                 +  ++      ++P    A +   + A V +  GKY +A ++          ++
Sbjct: 86  YELKDLKSLDKLQAYLDEYPDTPYANRIYALMASVYFFEGKYDEAMAMFNSARLDLLGNE 145

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
             D + Y +   Y +            K    +   +  R T+  Y     +Y++  R  
Sbjct: 146 ERDDMTYRLATCYLKT--------GNVKEAAIWFETL--RSTSKKYAADCTYYISYIRYT 195

Query: 189 LAAKE--------------------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
               +                      I   YL +  Y  A    Q  L+ Y + E+  E
Sbjct: 196 QQRYDEAMTGFLSLQDNAKYKALAPYYIAEIYLIKKNYDKAEIVAQNYLSAYPNNEYTAE 255

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
               L +A        EA E      E   +    R    ++
Sbjct: 256 MYRVLGDADYHFGKYHEAMEAFEKYLENNKEAAPRRDALYML 297



 Score = 40.1 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 63/190 (33%), Gaps = 27/190 (14%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A  +LK  N  +A  +F            A       ++++Y+  +Y +A +    +
Sbjct: 152 YRLATCYLKTGNVKEAAIWFETLRST--SKKYAADCTYYISYIRYTQQRYDEAMTG---F 206

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           ++      N  Y      ++    I ++   ++            +  Y N+ Y      
Sbjct: 207 LSL---QDNAKY----KALAPY-YIAEIYLIKKNYDKAEIVAQNYLSAYPNNEYTAEMYR 258

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
            +                Y+   G+Y  A+  F+  L N  +A    +A+  L  +Y   
Sbjct: 259 VLGD------------ADYHF--GKYHEAMEAFEKYLENNKEAAPRRDALYMLGLSYYNC 304

Query: 241 ALMDEAREVV 250
            +  +A   +
Sbjct: 305 GVYSKAANTL 314



 Score = 35.9 bits (82), Expect = 6.8,   Method: Composition-based stats.
 Identities = 19/173 (10%), Positives = 48/173 (27%), Gaps = 22/173 (12%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
                ++      +  +Y   + +     +SKA     + + +     +A+ + L     
Sbjct: 278 EKYLENNKEAAPRRDALYMLGLSYYNCGVYSKAANTLGEVTAEN--DALAQNAYLHMGLA 335

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
                   +A    E+      + +  +   Y   +   +          A    +    
Sbjct: 336 YLQMSDKNKARMAFEQAAASNADMQVKEQAAYNYALCIHETSYS------AFGESVTVFE 389

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
           + +  + NS YV     Y+                 Y+    Y AA+   + +
Sbjct: 390 KFLNEFPNSQYVDKVSSYLVEV--------------YMNTRSYEAALKSIERI 428



 Score = 35.5 bits (81), Expect = 9.2,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 67/215 (31%), Gaps = 34/215 (15%)

Query: 50  SVTDVRYQRE-VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
              D  Y +E +  +A +    + F +A   + Q           + +            
Sbjct: 805 EYPDNPYSQEALIARAEILFNRKQFDQALNDYRQLKAKATTPERRQLAETGMLRSAALMQ 864

Query: 109 KYQQAASLGEEYI---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
              +  +   + +      PE +N     Y    +Y          QRA K  +  +  +
Sbjct: 865 DDVETIAAATDLLAETKLTPELRN--EALYFRAKAYLN--------QRADKKAMNDLQTL 914

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
            +  T + Y   A+                + +   K GEY AA       +       H
Sbjct: 915 AKD-TRTLYGAEAK--------------YLVAQQLYKAGEYTAAEKEILNFID--QSTPH 957

Query: 226 AE---EAMARLVEAYVALALMDEAREVVSLIQERY 257
           A     +   L + YVA+    +AR+ +  +Q+ Y
Sbjct: 958 AYWLARSFVLLSDVYVAMDKKLDARQYLLSLQQNY 992


>gi|82776020|ref|YP_402367.1| tol-pal system protein YbgF [Shigella dysenteriae Sd197]
 gi|309786421|ref|ZP_07681047.1| tol-pal system protein YbgF [Shigella dysenteriae 1617]
 gi|81240168|gb|ABB60878.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
 gi|308925815|gb|EFP71296.1| tol-pal system protein YbgF [Shigella dysenteriae 1617]
          Length = 263

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 49/156 (31%), Gaps = 9/156 (5%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89
           +           +      +          Y  A+  +++++    A   F    +++P 
Sbjct: 116 SGAAASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPD 175

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +     +      + Y+ GK   AA      +  YP+S       + VG+        + 
Sbjct: 176 STYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGV--------IM 227

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            D+  T        +++ +Y  +   K A+  +   
Sbjct: 228 QDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM 263



 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      ++ Y +S Y+  A +++              G
Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWL--------------G 187

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           +    +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 188 QLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 247

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 248 PGTDGAKQAQK 258



 Score = 49.0 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I  YP+S  +    Y +G       +              Y + +V+ Y 
Sbjct: 160 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A F V V                  +G+   A   +Q V++ Y   + A++A 
Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257

Query: 231 ARL 233
            RL
Sbjct: 258 KRL 260


>gi|15800458|ref|NP_286470.1| tol-pal system protein YbgF [Escherichia coli O157:H7 EDL933]
 gi|15830031|ref|NP_308804.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. Sakai]
 gi|168759043|ref|ZP_02784050.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC4401]
 gi|168767194|ref|ZP_02792201.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC4486]
 gi|168779237|ref|ZP_02804244.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC4076]
 gi|168786908|ref|ZP_02811915.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC869]
 gi|195936737|ref|ZP_03082119.1| hypothetical protein EscherichcoliO157_09785 [Escherichia coli
           O157:H7 str. EC4024]
 gi|208808005|ref|ZP_03250342.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC4206]
 gi|208816398|ref|ZP_03257577.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC4045]
 gi|208822278|ref|ZP_03262597.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC4042]
 gi|209395711|ref|YP_002269376.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC4115]
 gi|217325865|ref|ZP_03441949.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. TW14588]
 gi|254791899|ref|YP_003076736.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. TW14359]
 gi|261224453|ref|ZP_05938734.1| SecB-dependent secretory protein [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261254555|ref|ZP_05947088.1| SecB-dependent secretory protein [Escherichia coli O157:H7 str.
           FRIK966]
 gi|291281685|ref|YP_003498503.1| Tol-pal system protein YbgF [Escherichia coli O55:H7 str. CB9615]
 gi|12513675|gb|AAG55078.1|AE005252_14 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
 gi|13360236|dbj|BAB34200.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
 gi|189003102|gb|EDU72088.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC4076]
 gi|189354291|gb|EDU72710.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC4401]
 gi|189363451|gb|EDU81870.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC4486]
 gi|189373185|gb|EDU91601.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC869]
 gi|208727806|gb|EDZ77407.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC4206]
 gi|208733046|gb|EDZ81734.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC4045]
 gi|208737763|gb|EDZ85446.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC4042]
 gi|209157111|gb|ACI34544.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC4115]
 gi|209776368|gb|ACI86496.1| hypothetical protein ECs0777 [Escherichia coli]
 gi|209776370|gb|ACI86497.1| hypothetical protein ECs0777 [Escherichia coli]
 gi|209776372|gb|ACI86498.1| hypothetical protein ECs0777 [Escherichia coli]
 gi|209776374|gb|ACI86499.1| hypothetical protein ECs0777 [Escherichia coli]
 gi|209776376|gb|ACI86500.1| hypothetical protein ECs0777 [Escherichia coli]
 gi|217322086|gb|EEC30510.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. TW14588]
 gi|254591299|gb|ACT70660.1| SecB-dependent secretory protein [Escherichia coli O157:H7 str.
           TW14359]
 gi|290761558|gb|ADD55519.1| Tol-pal system protein YbgF [Escherichia coli O55:H7 str. CB9615]
 gi|320193147|gb|EFW67787.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC1212]
 gi|320638000|gb|EFX07769.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. G5101]
 gi|320643396|gb|EFX12576.1| tol-pal system protein YbgF [Escherichia coli O157:H- str. 493-89]
 gi|320648690|gb|EFX17326.1| tol-pal system protein YbgF [Escherichia coli O157:H- str. H 2687]
 gi|320654328|gb|EFX22381.1| tol-pal system protein YbgF [Escherichia coli O55:H7 str. 3256-97
           TW 07815]
 gi|320659960|gb|EFX27502.1| tol-pal system protein YbgF [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320664786|gb|EFX31924.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. LSU-61]
 gi|326341509|gb|EGD65299.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. 1044]
 gi|326345728|gb|EGD69467.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. 1125]
          Length = 263

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 49/156 (31%), Gaps = 9/156 (5%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89
           +           +      +          Y  A+  +++++    A   F    +++P 
Sbjct: 116 SGAAASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPD 175

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +     +      + Y+ GK   AA      +  YP+S       + VG+        + 
Sbjct: 176 STYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGV--------IM 227

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            D+  T        +++ +Y  +   K A+  +   
Sbjct: 228 QDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM 263



 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      ++ Y +S Y+  A +++              G
Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWL--------------G 187

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           +    +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 188 QLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 247

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 248 PGTDGAKQAQK 258



 Score = 49.0 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I  YP+S  +    Y +G       +              Y + +V+ Y 
Sbjct: 160 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A F V V                  +G+   A   +Q V++ Y   + A++A 
Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257

Query: 231 ARL 233
            RL
Sbjct: 258 KRL 260


>gi|323976277|gb|EGB71367.1| tol-pal system protein YbgF [Escherichia coli TW10509]
          Length = 263

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 49/156 (31%), Gaps = 9/156 (5%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89
           +           +      +          Y  A+  +++++    A   F    +++P 
Sbjct: 116 SGAAASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPD 175

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +     +      + Y+ GK   AA      +  YP+S       + VG+        + 
Sbjct: 176 STYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGV--------IM 227

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            D+  T        +++ +Y  +   K A+  +   
Sbjct: 228 QDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM 263



 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      ++ Y +S Y+  A +++              G
Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWL--------------G 187

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           +    +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 188 QLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 247

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 248 PGTDGAKQAQK 258



 Score = 49.0 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I  YP+S  +    Y +G       +              Y + +V+ Y 
Sbjct: 160 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A F V V                  +G+   A   +Q V++ Y   + A++A 
Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257

Query: 231 ARL 233
            RL
Sbjct: 258 KRL 260


>gi|297568869|ref|YP_003690213.1| tol-pal system protein YbgF [Desulfurivibrio alkaliphilus AHT2]
 gi|296924784|gb|ADH85594.1| tol-pal system protein YbgF [Desulfurivibrio alkaliphilus AHT2]
          Length = 357

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 18/129 (13%), Positives = 43/129 (33%), Gaps = 8/129 (6%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            + Y + +  L+  N+ +AY  F +   + P    A  +        +   +Y+ A    
Sbjct: 237 DDYYSQGLRQLERNNYREAYTAFARYLEEEPRGENAADARFRLGESLFGQQEYELAILEY 296

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           ++ I  +     V       G+++ ++        R          R++  + N    + 
Sbjct: 297 QKVIADFSGHDRVPAAMLRQGVAFEEL--------REPATAAIIYERLIGEFPNRREAQQ 348

Query: 178 ARFYVTVGR 186
           AR  +    
Sbjct: 349 ARERLEKIN 357


>gi|17986624|ref|NP_539258.1| TPR repeat-containing protein [Brucella melitensis bv. 1 str. 16M]
 gi|17982238|gb|AAL51522.1| tpr repeat containing exported protein [Brucella melitensis bv. 1
           str. 16M]
          Length = 194

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 50/127 (39%), Gaps = 8/127 (6%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           +  + S+        +Y+ A  +L   ++  A   F +  + +P   +  ++        
Sbjct: 58  NDAVASLPTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESL 117

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y  G+Y +AA+L  +    YP+SK      + +GM+  +M            +     ++
Sbjct: 118 YGQGRYPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNH--------DVACATFAQ 169

Query: 165 IVERYTN 171
           I +RY  
Sbjct: 170 IPQRYPK 176



 Score = 42.4 bits (99), Expect = 0.069,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 8/104 (7%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           SL  +A+    +G Y+ A +   E++ +YP         + +G S     R         
Sbjct: 72  SLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYP------- 124

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
                        Y +S       F + +   ++   +V    +
Sbjct: 125 -EAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATF 167



 Score = 37.8 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 14/107 (13%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         V+RY   P    ARF++                    +G Y  A   
Sbjct: 84  GDYKAAEAGFREHVKRYPADPMTAEARFWLGESL--------------YGQGRYPEAATL 129

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           F     +Y D++ A E M +L  A   +   D A    + I +RYP+
Sbjct: 130 FIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYPK 176



 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 23/68 (33%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +    YL  G+Y AA   F+  +  Y       EA   L E+        EA  +    
Sbjct: 74  YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 133

Query: 254 QERYPQGY 261
           Q  YP   
Sbjct: 134 QRDYPDSK 141


>gi|300957691|ref|ZP_07169880.1| tol-pal system protein YbgF [Escherichia coli MS 175-1]
 gi|300315609|gb|EFJ65393.1| tol-pal system protein YbgF [Escherichia coli MS 175-1]
          Length = 263

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 46/126 (36%), Gaps = 9/126 (7%)

Query: 61  YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A+  +++++    A   F    +++P +     +      + Y+ GK   AA     
Sbjct: 146 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       + VG+        +  D+  T        +++ +Y  +   K A+
Sbjct: 206 VVKNYPKSPKAADAMFKVGV--------IMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257

Query: 180 FYVTVG 185
             +   
Sbjct: 258 KRLNAM 263



 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      ++ Y +S Y+  A +++               
Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLN----------- 190

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
                +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 191 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 247

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 248 PGTDGAKQAQK 258



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I  YP+S  +    Y +G       +              Y + +V+ Y 
Sbjct: 160 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A F V V                  +G+   A   +Q V++ Y   + A++A 
Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257

Query: 231 ARL 233
            RL
Sbjct: 258 KRL 260


>gi|16128717|ref|NP_415270.1| periplasmic TolA-binding protein [Escherichia coli str. K-12
           substr. MG1655]
 gi|89107600|ref|AP_001380.1| hypothetical protein [Escherichia coli str. K-12 substr. W3110]
 gi|170080409|ref|YP_001729729.1| hypothetical protein ECDH10B_0809 [Escherichia coli str. K-12
           substr. DH10B]
 gi|238900007|ref|YP_002925803.1| hypothetical protein BWG_0601 [Escherichia coli BW2952]
 gi|256023655|ref|ZP_05437520.1| tol-pal system protein YbgF [Escherichia sp. 4_1_40B]
 gi|300947177|ref|ZP_07161387.1| tol-pal system protein YbgF [Escherichia coli MS 116-1]
 gi|301648047|ref|ZP_07247814.1| tol-pal system protein YbgF [Escherichia coli MS 146-1]
 gi|307137355|ref|ZP_07496711.1| tol-pal system protein YbgF [Escherichia coli H736]
 gi|331641243|ref|ZP_08342378.1| putative tol-pal system protein YbgF [Escherichia coli H736]
 gi|2506623|sp|P45955|YBGF_ECOLI RecName: Full=Uncharacterized protein YbgF; Flags: Precursor
 gi|1786963|gb|AAC73836.1| periplasmic TolA-binding protein [Escherichia coli str. K-12
           substr. MG1655]
 gi|4062322|dbj|BAA35408.1| hypothetical protein [Escherichia coli str. K12 substr. W3110]
 gi|169888244|gb|ACB01951.1| predicted protein [Escherichia coli str. K-12 substr. DH10B]
 gi|238862957|gb|ACR64955.1| predicted protein [Escherichia coli BW2952]
 gi|260450104|gb|ACX40526.1| tol-pal system protein YbgF [Escherichia coli DH1]
 gi|300453163|gb|EFK16783.1| tol-pal system protein YbgF [Escherichia coli MS 116-1]
 gi|301073873|gb|EFK88679.1| tol-pal system protein YbgF [Escherichia coli MS 146-1]
 gi|315135399|dbj|BAJ42558.1| tol-pal system protein YbgF [Escherichia coli DH1]
 gi|315614618|gb|EFU95260.1| tol-pal system protein YbgF [Escherichia coli 3431]
 gi|323942965|gb|EGB39129.1| tol-pal system protein YbgF [Escherichia coli E482]
 gi|323972029|gb|EGB67249.1| tol-pal system protein YbgF [Escherichia coli TA007]
 gi|331038041|gb|EGI10261.1| putative tol-pal system protein YbgF [Escherichia coli H736]
          Length = 263

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 46/126 (36%), Gaps = 9/126 (7%)

Query: 61  YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A+  +++++    A   F    +++P +     +      + Y+ GK   AA     
Sbjct: 146 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       + VG+        +  D+  T        +++ +Y  +   K A+
Sbjct: 206 VVKNYPKSPKAADAMFKVGV--------IMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257

Query: 180 FYVTVG 185
             +   
Sbjct: 258 KRLNAM 263



 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      ++ Y +S Y+  A +++               
Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLN----------- 190

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
                +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 191 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 247

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 248 PGTDGAKQAQK 258



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I  YP+S  +    Y +G       +              Y + +V+ Y 
Sbjct: 160 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A F V V                  +G+   A   +Q V++ Y   + A++A 
Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257

Query: 231 ARL 233
            RL
Sbjct: 258 KRL 260


>gi|21226280|ref|NP_632202.1| hypothetical protein MM_0178 [Methanosarcina mazei Go1]
 gi|20904523|gb|AAM29874.1| conserved protein [Methanosarcina mazei Go1]
          Length = 1711

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 65/202 (32%), Gaps = 24/202 (11%)

Query: 31   AVCFLVGWERQSSRDVYLDSVTDVRYQRE-VYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
             +  L     + +RD +   + +     + +Y +AV   K  NF  A +   +     P 
Sbjct: 1356 GLALLSLCRYEEARDAFSSVLEESPENADVLYNRAVASFKTLNFEDAAKDLEKVLLFAPD 1415

Query: 90   AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
            +    ++  M          Y++A    +  +   PE +      Y + +    +     
Sbjct: 1416 SPDYTEACYMLGIASIELQDYERALQALDMVLEWEPEHEE---ALYNMALVLFNL----- 1467

Query: 150  YDQRATKLMLQYMSRIVERYTNSP----YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
                  +   +   +++E     P    Y+      +   +  L A E +   +  K  E
Sbjct: 1468 ---EEYEEAARTFEQLLETSPEDPESLNYLGLCLLELDNLKEALKAFE-KAALFNPKNEE 1523

Query: 206  --YVAA-----IPRFQLVLANY 220
              Y AA     + R Q  L  +
Sbjct: 1524 ALYNAATTLIKLNRAQESLGYF 1545



 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/221 (19%), Positives = 80/221 (36%), Gaps = 40/221 (18%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA-RKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y K ++  K + +  A E F+  +R+ P    A  +  L+ A      GK   A    E+
Sbjct: 68  YAKGLVLAKLEKYDSALECFDSLTRENPRNENALEQKCLLLA----KIGKKDLALEALED 123

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV--KG 177
           ++ +YP ++      Y  G+  +++ R         +   +  S++++    +     + 
Sbjct: 124 FLKKYPANEA---ALYHKGILLSELSR--------YEEAEKIFSKVLKLDPENREAWFRK 172

Query: 178 ARFYVTVGRNQLAAKEVEIG-----RYY----------LKRGEYVAAIPRFQLVLANYSD 222
               V + R   A K  E        Y+          +K   Y  A+  F  +L  Y D
Sbjct: 173 GFALVQLLRLNEAIKAFEEAIKIDPSYFEAWNCRCFALMKLEVYEEALEAFDSMLRIYPD 232

Query: 223 AE--HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            +      A+A L      L    EA +  + + E  P+  
Sbjct: 233 VKDIWYSRALALL-----KLQNYAEAVQSFARVTELDPENK 268



 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 81/252 (32%), Gaps = 68/252 (26%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPF--------AGVARKSLLMSAFVQYSAGKYQQ 112
           Y   V   +   + KA E F + + + P+          +A +            G Y+ 
Sbjct: 510 YSLGVALTELGEYEKALETFEKLASENPYDLEIQCRRGKLAMEV-----------GNYET 558

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP----YDQRATKL----------- 157
           A    E  +T+ P S+     +Y  G++  ++         +D  ATK            
Sbjct: 559 ALQAFERILTEKPASRE---AWYRKGLALLKLENFEEAVKAFDAVATKDADYEDAGVLKG 615

Query: 158 -----------MLQYMSRIVERYTNSPYVKGARFYVTVG--RNQLAAKEVEIGR-----Y 199
                       L+   R++E+  +S      R  +     R + AAK  E         
Sbjct: 616 FAQMKLKECASALETFERVLEKKPDSDTAWYYRGMILYTLQRQEEAAKAFESASRLNPGL 675

Query: 200 Y----------LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           Y           + G+Y AA   F+ VL    +      A+ +       L    EA + 
Sbjct: 676 YTAFEYRAKCLFETGQYEAAFEAFEAVLEKDPE---NLSALEKRAICLFELKKNKEAVDA 732

Query: 250 VSLIQERYPQGY 261
           +S + E  P+  
Sbjct: 733 LSTLLESDPERK 744



 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 54/144 (37%), Gaps = 19/144 (13%)

Query: 53   DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
            D    + +Y   V+  K++ +  A   F +     P      +SL          G+Y++
Sbjct: 1586 DPENIKAIYNVGVVCFKQKLYETAARAFKEALSINP---WHEQSLRYLGISLAKIGEYEE 1642

Query: 113  AASLGEEYITQYPES-KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            A    E+ +   P+  ++++Y     G+   ++ R            ++    I+  Y +
Sbjct: 1643 ALKAFEKLLRINPQDVQSMNY----RGVILGKLER--------FGEAIRAFDEILRIYPD 1690

Query: 172  SPYVKGARFYVTVGRNQLAAKEVE 195
               +  AR  + V ++    +E+ 
Sbjct: 1691 ---MADAREKLEVLKSLENDEELY 1711



 Score = 49.3 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 75/218 (34%), Gaps = 33/218 (15%)

Query: 48   LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
            L+   D+R  +E  +K +  L    + +A + F+    +   +      L   A   +  
Sbjct: 1342 LEIKPDLRAAQE--QKGLALLSLCRYEEARDAFSSVLEE---SPENADVLYNRAVASFKT 1396

Query: 108  GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
              ++ AA   E+ +   P+S +     Y++G++  ++        +  +  LQ +  ++E
Sbjct: 1397 LNFEDAAKDLEKVLLFAPDSPDYTEACYMLGIASIEL--------QDYERALQALDMVLE 1448

Query: 168  RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
                      A + + +                    EY  A   F+ +L     +    
Sbjct: 1449 WEPEHE---EALYNMALVL--------------FNLEEYEEAARTFEQLLE---TSPEDP 1488

Query: 228  EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
            E++  L    + L  + EA +         P+   A Y
Sbjct: 1489 ESLNYLGLCLLELDNLKEALKAFEKAALFNPKNEEALY 1526



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 75/238 (31%), Gaps = 45/238 (18%)

Query: 40   RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
            +Q+  D     + +   +  + +  +  LK   +  A + F +     P          M
Sbjct: 1264 KQAVPDGEESKIGEPELEDALTKIGLSQLKTGKYEDACDTFEKVLEKNP----------M 1313

Query: 100  SAFVQYSAG-------KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
            +A + Y +G       + + A       +   P+ +         G++   + R      
Sbjct: 1314 AADIWYLSGLVMRGLDQNEDAVEAFNRALEIKPDLRA---AQEQKGLALLSLCR------ 1364

Query: 153  RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
               +      S ++E    +           V  N+       +  +  K   +  A   
Sbjct: 1365 --YEEARDAFSSVLEESPENA---------DVLYNR------AVASF--KTLNFEDAAKD 1405

Query: 213  FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
             + VL    D+    EA   L  A + L   + A + + ++ E  P+   A Y   LV
Sbjct: 1406 LEKVLLFAPDSPDYTEACYMLGIASIELQDYERALQALDMVLEWEPEHEEALYNMALV 1463



 Score = 39.7 bits (92), Expect = 0.43,   Method: Composition-based stats.
 Identities = 15/117 (12%), Positives = 41/117 (35%), Gaps = 18/117 (15%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           + K    ++    ++A + F +  +  P  F     +      F       Y++A    +
Sbjct: 170 FRKGFALVQLLRLNEAIKAFEEAIKIDPSYFEAWNCRC-----FALMKLEVYEEALEAFD 224

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
             +  YP+ K++   +Y   ++  ++        +     +Q  +R+ E    +   
Sbjct: 225 SMLRIYPDVKDI---WYSRALALLKL--------QNYAEAVQSFARVTELDPENKDA 270



 Score = 39.3 bits (91), Expect = 0.56,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 65/219 (29%), Gaps = 44/219 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +K ++ L       A + F   +R  P           +   F  YS  +Y++A    +E
Sbjct: 341 QKGLILLDTGKLEPAIDAFENAARLNPDNETCW-----MNMGFALYSLERYEEALEAFKE 395

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +   P    ++  +   G+   ++          T   L+     ++   +       R
Sbjct: 396 GLRLNP---YLETGWNRKGIVLGKL--------GKTGEALEAFEEAIKLRPDFEDAWKNR 444

Query: 180 FYVTVGRNQLAAKEVEIGRY-----------Y------LKRGEYVAAIPRFQLVLA---N 219
             +     +    E                 Y      LK G    A+   + V++   +
Sbjct: 445 GLLLFASEECEKAEEAFAEVLKINPEDIDSLYNRGISLLKLGRKETALEYLEKVVSLRPD 504

Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           Y D  ++      L  A   L   ++A E    +    P
Sbjct: 505 YPDLSYS------LGVALTELGEYEKALETFEKLASENP 537



 Score = 36.2 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 88/228 (38%), Gaps = 37/228 (16%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
           + +  +Y  +    +    +Y K ++F++++ + KA E F   +   P            
Sbjct: 779 EKAEGIYEKTRDPQKPNSVLYWKGLVFIRQEAYEKAVEAFKGITDQDP----------NF 828

Query: 101 AFVQY-------SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
           A   Y         G+Y++A+   ++ +      ++   + Y +G+S  ++         
Sbjct: 829 AEGWYFTGLSCSKLGRYEEASEAFKKALEINSALRDTHDICYQLGISNFEL--------G 880

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
             +  L+   +  +   +   +    +      + +  K + +    L+ G Y  A   F
Sbjct: 881 KFEEALKAFEKAFKTTPDREQITETTY-----TDLIYMKSLSL----LRLGRYKEAEVGF 931

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           + V+  + D+++A EA+A L  A       +EA E+   +  + P+  
Sbjct: 932 KEVI--FRDSDNA-EALAHLSTACFKQEHYEEALEIFEKVLSQTPERK 976



 Score = 35.1 bits (80), Expect = 9.9,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 72/213 (33%), Gaps = 34/213 (15%)

Query: 34   FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
             L  +E+        + +T+  Y   +Y K++  L+   + +A   F +       +  A
Sbjct: 885  ALKAFEKAFKTTPDREQITETTYTDLIYMKSLSLLRLGRYKEAEVGFKEVIFRD--SDNA 942

Query: 94   RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
              +L   +   +    Y++A  + E+ ++Q PE K    V +  G++   +         
Sbjct: 943  E-ALAHLSTACFKQEHYEEALEIFEKVLSQTPERKT---VLFRKGVALKAL--------G 990

Query: 154  ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
              +  L     +++   +  Y    R Y        A  E+         G Y  A   F
Sbjct: 991  KIQDSLDIFDLVLKLKPDCSYALEQRGY--------ALFEL---------GRYGEAAEAF 1033

Query: 214  QLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
            +  L    +  + +        A+  +    EA
Sbjct: 1034 KEALEYCPNKTYMQ---YLKGLAFFRIGNFTEA 1063


>gi|87310532|ref|ZP_01092661.1| hypothetical protein DSM3645_07695 [Blastopirellula marina DSM
           3645]
 gi|87286753|gb|EAQ78658.1| hypothetical protein DSM3645_07695 [Blastopirellula marina DSM
           3645]
          Length = 390

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 67/172 (38%), Gaps = 14/172 (8%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY----ITQYPES 127
            F  A + ++    D P   +A  + L +A   +  GKY+      + +       +P S
Sbjct: 180 RFGNAIKLYDMIRLDDPTGKLADDATLAAANANFKRGKYE----AADRFYTDLRQNFPSS 235

Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN----SPYVKGARFYVT 183
           ++    +YL      +M +   YD ++ +   +   R+  ++ +          A     
Sbjct: 236 EHQFIGHYLGMFCKLKMYQGPSYDGQSLEEAGKLAERMERQFPDRVVEHREAIDAAKK-- 293

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
             R + A +   +  ++  R +Y  A   +  V+  + ++  A+ A  R+VE
Sbjct: 294 EVRAKQAERLWHLATFFEGRQQYGGARFYYDQVIQEFPNSNMADAARQRMVE 345



 Score = 39.3 bits (91), Expect = 0.55,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 39/102 (38%), Gaps = 10/102 (9%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQ----------NFSKAYEYFNQCSRDFPFAG 91
           S R+       D    + +Y +A    ++              KA + F    + +  + 
Sbjct: 42  SIRETTGKVAQDKARAKRLYAEAEAQYEQGIKAPVGQRDNALHKAADNFILAGKYYGESD 101

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
           +   SL+ +A   Y   +Y  A  +  + + +YP +K +D V
Sbjct: 102 LEENSLMYAAECYYFLDEYPDAVEMYGKLVKKYPNTKYLDQV 143


>gi|24111982|ref|NP_706492.1| tol-pal system protein YbgF [Shigella flexneri 2a str. 301]
 gi|110804632|ref|YP_688152.1| tol-pal system protein YbgF [Shigella flexneri 5 str. 8401]
 gi|24050795|gb|AAN42199.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
 gi|110614180|gb|ABF02847.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
          Length = 263

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 49/156 (31%), Gaps = 9/156 (5%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89
           +           +      +          Y  A+  +++++    A   F    +++P 
Sbjct: 116 SGATASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPD 175

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +     +      + Y+ GK   AA      +  YP+S       + VG+        + 
Sbjct: 176 STYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGV--------IM 227

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            D+  T        +++ +Y  +   K A+  +   
Sbjct: 228 QDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM 263



 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      ++ Y +S Y+  A +++              G
Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWL--------------G 187

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           +    +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 188 QLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 247

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 248 PGTDGAKQAQK 258



 Score = 49.0 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I  YP+S  +    Y +G       +              Y + +V+ Y 
Sbjct: 160 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A F V V                  +G+   A   +Q V++ Y   + A++A 
Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257

Query: 231 ARL 233
            RL
Sbjct: 258 KRL 260


>gi|30062095|ref|NP_836266.1| tol-pal system protein YbgF [Shigella flexneri 2a str. 2457T]
 gi|30040339|gb|AAP16072.1| hypothetical protein S0568 [Shigella flexneri 2a str. 2457T]
 gi|281599942|gb|ADA72926.1| putative exported protein [Shigella flexneri 2002017]
 gi|332763938|gb|EGJ94176.1| tol-pal system protein YbgF [Shigella flexneri K-671]
 gi|332768159|gb|EGJ98344.1| tol-pal system protein YbgF [Shigella flexneri 2930-71]
          Length = 263

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 49/156 (31%), Gaps = 9/156 (5%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89
           +           +      +          Y  A+  +++++    A   F    +++P 
Sbjct: 116 SGATASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPD 175

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +     +      + Y+ GK   AA      +  YP+S       + VG+        + 
Sbjct: 176 STYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGV--------IM 227

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            D+  T        +++ +Y  +   K A+  +   
Sbjct: 228 QDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM 263



 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      ++ Y +S Y+  A +++              G
Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWL--------------G 187

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           +    +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 188 QLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 247

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 248 PGTDGAKQAQK 258



 Score = 49.0 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I  YP+S  +    Y +G       +              Y + +V+ Y 
Sbjct: 160 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A F V V                  +G+   A   +Q V++ Y   + A++A 
Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257

Query: 231 ARL 233
            RL
Sbjct: 258 KRL 260


>gi|239995971|ref|ZP_04716495.1| Tetratricopeptide TPR_2 [Alteromonas macleodii ATCC 27126]
          Length = 264

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 27/146 (18%)

Query: 93  ARKSLLMSAFVQ-----YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
           A ++    A+         + +Y +A    + +I+++P S      +Y +G         
Sbjct: 138 APQAGEDEAYENAVNLILKSREYDKAIPAFQSFISRFPNSGYAPNAHYWLGQLLFNK--- 194

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
                +      +  + +  R+T+S     A   + V     A           + G+  
Sbjct: 195 -----QQWSEASEQFNIVANRFTDSSKRPDALLKLGVI----AE----------RTGDSS 235

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARL 233
            A   FQ V+ +Y D+     A +RL
Sbjct: 236 TARQLFQQVVNDYPDSSAKRLAESRL 261



 Score = 52.4 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 63/192 (32%), Gaps = 19/192 (9%)

Query: 1   MSAVLGRAICIFEAWAYQL--YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQR 58
           +  VL R   ++     ++   K +  +  S      V     SS      +      + 
Sbjct: 85  LQKVLERQRELYLEIDKRVEALKQSGALQGSAMPSAGVDSGSVSSPTASTPTQAPQAGED 144

Query: 59  EVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL- 116
           E YE AV   LK + + KA   F      FP +G A  +      + ++  ++ +A+   
Sbjct: 145 EAYENAVNLILKSREYDKAIPAFQSFISRFPNSGYAPNAHYWLGQLLFNKQQWSEASEQF 204

Query: 117 ---GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
                 +     +S         +G+     I +   D    +   Q   ++V  Y +S 
Sbjct: 205 NIVANRFT----DSSKRPDALLKLGV-----IAERTGDSSTAR---QLFQQVVNDYPDSS 252

Query: 174 YVKGARFYVTVG 185
             + A   +   
Sbjct: 253 AKRLAESRLNNL 264



 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 39/116 (33%), Gaps = 14/116 (12%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           R     +      + R+ NS Y   A +++                    + ++  A  +
Sbjct: 158 REYDKAIPAFQSFISRFPNSGYAPNAHYWLGQLL--------------FNKQQWSEASEQ 203

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           F +V   ++D+    +A+ +L            AR++   +   YP     R  E+
Sbjct: 204 FNIVANRFTDSSKRPDALLKLGVIAERTGDSSTARQLFQQVVNDYPDSSAKRLAES 259


>gi|115378696|ref|ZP_01465844.1| tetratricopeptide repeat domain protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|310822370|ref|YP_003954728.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|115364282|gb|EAU63369.1| tetratricopeptide repeat domain protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309395442|gb|ADO72901.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1]
          Length = 343

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 55/174 (31%), Gaps = 11/174 (6%)

Query: 1   MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
           M+ V  R+ C     + + +          AV    G    ++              R  
Sbjct: 141 MAHVRLRSGCESPVLSDKRFVLQAIPPEKAAVSAGAGAPTLAAELAGKRGNPKFELARAE 200

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
            EK   +   + + +A E F +   + P    +  + L     Q   G+   A +  +  
Sbjct: 201 LEKGERYYLNKQYKEAAEAFQRSVDNDPT--WS--ANLGLGSSQLKLGQVTAAIASLDRA 256

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ---YMSRIVERYTN 171
               P + N+    Y++G ++AQ            +  +     +  ++E   +
Sbjct: 257 SKLQPNNPNI---LYMLGCAHAQAGSK-KRALGFLRQTVDLGYELHTVIEGDPD 306


>gi|242280186|ref|YP_002992315.1| tol-pal system protein YbgF [Desulfovibrio salexigens DSM 2638]
 gi|242123080|gb|ACS80776.1| tol-pal system protein YbgF [Desulfovibrio salexigens DSM 2638]
          Length = 283

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 48/137 (35%), Gaps = 8/137 (5%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
                      +Y++ V  +   N  KA     Q     P + +A  +L       YS  
Sbjct: 153 PKPVSSLSGDALYQEGVRLVMNDNPVKARGLLEQYLAQNPSSKLAPNALYWIGETYYSEK 212

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
            + Q+    +E   ++P++  V      +G++Y ++           +  + Y+  ++E 
Sbjct: 213 SFAQSILKFKEVSRRFPKATKVPDAMLKIGLAYDKL--------GDRENAVFYLRTLIED 264

Query: 169 YTNSPYVKGARFYVTVG 185
           Y  S   K  R  +   
Sbjct: 265 YPKSAPAKIGRERLRAI 281



 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 1/74 (1%)

Query: 188 QLAAKEVE-IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
           +LA   +  IG  Y     +  +I +F+ V   +  A    +AM ++  AY  L   + A
Sbjct: 195 KLAPNALYWIGETYYSEKSFAQSILKFKEVSRRFPKATKVPDAMLKIGLAYDKLGDRENA 254

Query: 247 REVVSLIQERYPQG 260
              +  + E YP+ 
Sbjct: 255 VFYLRTLIEDYPKS 268


>gi|324009582|gb|EGB78801.1| tol-pal system protein YbgF [Escherichia coli MS 57-2]
          Length = 249

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 46/126 (36%), Gaps = 9/126 (7%)

Query: 61  YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A+  +++++    A   F    +++P +     +      + Y+ GK   AA     
Sbjct: 132 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 191

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       + VG+        +  D+  T        +++ +Y  +   K A+
Sbjct: 192 VVKNYPKSPKAADAMFKVGV--------IMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQ 243

Query: 180 FYVTVG 185
             +   
Sbjct: 244 KRLNAM 249



 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      ++ Y +S Y+  A +++              G
Sbjct: 128 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWL--------------G 173

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           +    +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 174 QLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 233

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 234 PGTDGAKQAQK 244



 Score = 49.0 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I  YP+S  +    Y +G       +              Y + +V+ Y 
Sbjct: 146 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 197

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A F V V                  +G+   A   +Q V++ Y   + A++A 
Sbjct: 198 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 243

Query: 231 ARL 233
            RL
Sbjct: 244 KRL 246


>gi|310767032|gb|ADP11982.1| putative exported protein [Erwinia sp. Ejp617]
          Length = 265

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 45/126 (35%), Gaps = 9/126 (7%)

Query: 61  YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  AV   L+++ +  A   F    + +P +     +      + Y+ GK   AA     
Sbjct: 148 YNAAVALVLEKKQYDNAISAFQAFVKQYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFAT 207

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            + +YP+S         VG+        +  ++           ++++ Y+NS   K A+
Sbjct: 208 VVKKYPKSPKSADALLKVGV--------IMQEKGDKAKAKAVYQQVIKLYSNSEAAKTAQ 259

Query: 180 FYVTVG 185
                 
Sbjct: 260 KRFAAL 265



 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 46/127 (36%), Gaps = 22/127 (17%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +Y  A S  + ++ QYP+S       Y +G       +              Y + +V+
Sbjct: 159 KQYDNAISAFQAFVKQYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYFATVVK 210

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
           +Y  SP    A   V V                 ++G+   A   +Q V+  YS++E A+
Sbjct: 211 KYPKSPKSADALLKVGVIMQ--------------EKGDKAKAKAVYQQVIKLYSNSEAAK 256

Query: 228 EAMARLV 234
            A  R  
Sbjct: 257 TAQKRFA 263



 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 2/71 (2%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           L++ +Y  AI  FQ  +  Y D+ +   A   L +        D+A    + + ++YP+ 
Sbjct: 156 LEKKQYDNAISAFQAFVKQYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFATVVKKYPKS 215

Query: 261 YWARYVETLVK 271
              +  + L+K
Sbjct: 216 --PKSADALLK 224



 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 30/86 (34%), Gaps = 1/86 (1%)

Query: 46  VYLDSVTDVRY-QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
            ++    D  Y     Y    L   +     A  YF    + +P +  +  +LL    + 
Sbjct: 170 AFVKQYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFATVVKKYPKSPKSADALLKVGVIM 229

Query: 105 YSAGKYQQAASLGEEYITQYPESKNV 130
              G   +A ++ ++ I  Y  S+  
Sbjct: 230 QEKGDKAKAKAVYQQVIKLYSNSEAA 255


>gi|33519800|ref|NP_878632.1| hypothetical protein Bfl340 [Candidatus Blochmannia floridanus]
 gi|33504145|emb|CAD83407.1| predicted lipoprotein [Candidatus Blochmannia floridanus]
          Length = 266

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 49/127 (38%), Gaps = 14/127 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            + I  +  +++   L +Q     ++ Y  S Y   A +++              G+ Y 
Sbjct: 148 YKKIVSLVLEKKQYNLAIQEFQNFIKNYPKSHYQPNAHYWL--------------GQLYY 193

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            +G    A   F LV+ NY  +  A +A+ ++          D+A+ +   I + YP   
Sbjct: 194 NQGHKTNASYHFALVVKNYPKSIKAPDALLKIGIIMQETNQKDKAKTIYQQIGKLYPNND 253

Query: 262 WARYVET 268
            A+  + 
Sbjct: 254 AAKQAQK 260



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 43/119 (36%), Gaps = 8/119 (6%)

Query: 68  LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
           L+++ ++ A + F    +++P +     +      + Y+ G    A+      +  YP+S
Sbjct: 156 LEKKQYNLAIQEFQNFIKNYPKSHYQPNAHYWLGQLYYNQGHKTNASYHFALVVKNYPKS 215

Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
                    +G+   +  +                 +I + Y N+   K A+  +T  +
Sbjct: 216 IKAPDALLKIGIIMQETNQK--------DKAKTIYQQIGKLYPNNDAAKQAQKRLTNLK 266


>gi|87118950|ref|ZP_01074848.1| hypothetical protein MED121_11810 [Marinomonas sp. MED121]
 gi|86165341|gb|EAQ66608.1| hypothetical protein MED121_11810 [Marinomonas sp. MED121]
          Length = 262

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 54/132 (40%), Gaps = 15/132 (11%)

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           ++  +    +  +    K         + +Y NS     + +++ + +            
Sbjct: 142 LAEYKAAYSLVRNNENAK-AEVAFVDFITKYPNSELSGNSYYWLGLLK------------ 188

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
             L  G+ V+AI +F+ V++ +   +   + + RL  AY+ +   + AR  +  + ER+P
Sbjct: 189 --LNSGDPVSAIEQFKSVISLFPSHDKETDTLYRLGFAYLKVDDKESARGYLVDVIERFP 246

Query: 259 QGYWARYVETLV 270
               A+  + L+
Sbjct: 247 NSKAAKLAKNLL 258



 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 46/138 (33%), Gaps = 22/138 (15%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +   +A+      +  +A     ++IT+YP S+     YY +G+        V       
Sbjct: 143 AEYKAAYSLVRNNENAKAEVAFVDFITKYPNSELSGNSYYWLGLLKLNSGDPVS------ 196

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
              ++    ++  + +        + +                 YLK  +  +A      
Sbjct: 197 --AIEQFKSVISLFPSHDKETDTLYRLGFA--------------YLKVDDKESARGYLVD 240

Query: 216 VLANYSDAEHAEEAMARL 233
           V+  + +++ A+ A   L
Sbjct: 241 VIERFPNSKAAKLAKNLL 258



 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 49/126 (38%), Gaps = 8/126 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A   ++    +KA   F      +P + ++  S      ++ ++G    A    +  
Sbjct: 145 YKAAYSLVRNNENAKAEVAFVDFITKYPNSELSGNSYYWLGLLKLNSGDPVSAIEQFKSV 204

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           I+ +P         Y +G +Y ++           +    Y+  ++ER+ NS   K A+ 
Sbjct: 205 ISLFPSHDKETDTLYRLGFAYLKVDDK--------ESARGYLVDVIERFPNSKAAKLAKN 256

Query: 181 YVTVGR 186
            ++  +
Sbjct: 257 LLSNIK 262



 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 23/86 (26%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           D               Y   +L L   +   A E F      FP       +L    F  
Sbjct: 166 DFITKYPNSELSGNSYYWLGLLKLNSGDPVSAIEQFKSVISLFPSHDKETDTLYRLGFAY 225

Query: 105 YSAGKYQQAASLGEEYITQYPESKNV 130
                 + A     + I ++P SK  
Sbjct: 226 LKVDDKESARGYLVDVIERFPNSKAA 251


>gi|74311266|ref|YP_309685.1| tol-pal system protein YbgF [Shigella sonnei Ss046]
 gi|157158211|ref|YP_001461903.1| tol-pal system protein YbgF [Escherichia coli E24377A]
 gi|157160224|ref|YP_001457542.1| tol-pal system protein YbgF [Escherichia coli HS]
 gi|170020913|ref|YP_001725867.1| tol-pal system protein YbgF [Escherichia coli ATCC 8739]
 gi|187731125|ref|YP_001879399.1| tol-pal system protein YbgF [Shigella boydii CDC 3083-94]
 gi|188492028|ref|ZP_02999298.1| tol-pal system protein YbgF [Escherichia coli 53638]
 gi|194440228|ref|ZP_03072260.1| tol-pal system protein YbgF [Escherichia coli 101-1]
 gi|209917993|ref|YP_002292077.1| tol-pal system protein YbgF [Escherichia coli SE11]
 gi|218553269|ref|YP_002386182.1| tol-pal system protein YbgF [Escherichia coli IAI1]
 gi|218694166|ref|YP_002401833.1| tol-pal system protein YbgF [Escherichia coli 55989]
 gi|253774287|ref|YP_003037118.1| tol-pal system protein YbgF [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254160812|ref|YP_003043920.1| tol-pal system protein YbgF [Escherichia coli B str. REL606]
 gi|256021182|ref|ZP_05435047.1| tol-pal system protein YbgF [Shigella sp. D9]
 gi|260842948|ref|YP_003220726.1| hypothetical protein ECO103_0737 [Escherichia coli O103:H2 str.
           12009]
 gi|260853977|ref|YP_003227868.1| hypothetical protein ECO26_0803 [Escherichia coli O26:H11 str.
           11368]
 gi|260866873|ref|YP_003233275.1| hypothetical protein ECO111_0759 [Escherichia coli O111:H- str.
           11128]
 gi|293433010|ref|ZP_06661438.1| hypothetical protein ECCG_01134 [Escherichia coli B088]
 gi|297520455|ref|ZP_06938841.1| tol-pal system protein YbgF [Escherichia coli OP50]
 gi|300816392|ref|ZP_07096614.1| tol-pal system protein YbgF [Escherichia coli MS 107-1]
 gi|300907001|ref|ZP_07124670.1| tol-pal system protein YbgF [Escherichia coli MS 84-1]
 gi|300918403|ref|ZP_07135003.1| tol-pal system protein YbgF [Escherichia coli MS 115-1]
 gi|300926146|ref|ZP_07141959.1| tol-pal system protein YbgF [Escherichia coli MS 182-1]
 gi|300929452|ref|ZP_07144920.1| tol-pal system protein YbgF [Escherichia coli MS 187-1]
 gi|301305230|ref|ZP_07211328.1| tol-pal system protein YbgF [Escherichia coli MS 124-1]
 gi|301327935|ref|ZP_07221106.1| tol-pal system protein YbgF [Escherichia coli MS 78-1]
 gi|307314793|ref|ZP_07594387.1| tol-pal system protein YbgF [Escherichia coli W]
 gi|309797457|ref|ZP_07691849.1| tol-pal system protein YbgF [Escherichia coli MS 145-7]
 gi|312970821|ref|ZP_07785000.1| tol-pal system protein YbgF [Escherichia coli 1827-70]
 gi|331667109|ref|ZP_08367974.1| putative periplasmic protein [Escherichia coli TA271]
 gi|331676424|ref|ZP_08377121.1| putative tol-pal system protein YbgF [Escherichia coli H591]
 gi|332282409|ref|ZP_08394822.1| tol-pal system protein YbgF [Shigella sp. D9]
 gi|73854743|gb|AAZ87450.1| conserved hypothetical protein [Shigella sonnei Ss046]
 gi|157065904|gb|ABV05159.1| tol-pal system protein YbgF [Escherichia coli HS]
 gi|157080241|gb|ABV19949.1| tol-pal system protein YbgF [Escherichia coli E24377A]
 gi|169755841|gb|ACA78540.1| tol-pal system protein YbgF [Escherichia coli ATCC 8739]
 gi|187428117|gb|ACD07391.1| tol-pal system protein YbgF [Shigella boydii CDC 3083-94]
 gi|188487227|gb|EDU62330.1| tol-pal system protein YbgF [Escherichia coli 53638]
 gi|194420837|gb|EDX36892.1| tol-pal system protein YbgF [Escherichia coli 101-1]
 gi|209911252|dbj|BAG76326.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|218350898|emb|CAU96596.1| putative RNA binding protein [Escherichia coli 55989]
 gi|218360037|emb|CAQ97584.1| putative RNA binding protein [Escherichia coli IAI1]
 gi|242376504|emb|CAQ31208.1| predicted periplasmic protein, subunit of The Tol-Pal Cell Envelope
           Complex, Colicin S4 Transport System and The Colicin A
           Import System [Escherichia coli BL21(DE3)]
 gi|253325331|gb|ACT29933.1| tol-pal system protein YbgF [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253972713|gb|ACT38384.1| hypothetical protein ECB_00702 [Escherichia coli B str. REL606]
 gi|253976907|gb|ACT42577.1| hypothetical protein ECD_00702 [Escherichia coli BL21(DE3)]
 gi|257752626|dbj|BAI24128.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368]
 gi|257758095|dbj|BAI29592.1| conserved predicted protein [Escherichia coli O103:H2 str. 12009]
 gi|257763229|dbj|BAI34724.1| conserved predicted protein [Escherichia coli O111:H- str. 11128]
 gi|291323829|gb|EFE63251.1| hypothetical protein ECCG_01134 [Escherichia coli B088]
 gi|300401222|gb|EFJ84760.1| tol-pal system protein YbgF [Escherichia coli MS 84-1]
 gi|300414466|gb|EFJ97776.1| tol-pal system protein YbgF [Escherichia coli MS 115-1]
 gi|300417845|gb|EFK01156.1| tol-pal system protein YbgF [Escherichia coli MS 182-1]
 gi|300462561|gb|EFK26054.1| tol-pal system protein YbgF [Escherichia coli MS 187-1]
 gi|300531082|gb|EFK52144.1| tol-pal system protein YbgF [Escherichia coli MS 107-1]
 gi|300839542|gb|EFK67302.1| tol-pal system protein YbgF [Escherichia coli MS 124-1]
 gi|300845578|gb|EFK73338.1| tol-pal system protein YbgF [Escherichia coli MS 78-1]
 gi|306905691|gb|EFN36219.1| tol-pal system protein YbgF [Escherichia coli W]
 gi|308118981|gb|EFO56243.1| tol-pal system protein YbgF [Escherichia coli MS 145-7]
 gi|309700964|emb|CBJ00261.1| putative tetratricopeptide repeat exported protein [Escherichia
           coli ETEC H10407]
 gi|310336582|gb|EFQ01749.1| tol-pal system protein YbgF [Escherichia coli 1827-70]
 gi|315059985|gb|ADT74312.1| predicted protein [Escherichia coli W]
 gi|315257661|gb|EFU37629.1| tol-pal system protein YbgF [Escherichia coli MS 85-1]
 gi|320172955|gb|EFW48183.1| tol-pal system protein YbgF [Shigella dysenteriae CDC 74-1112]
 gi|320179417|gb|EFW54374.1| tol-pal system protein YbgF [Shigella boydii ATCC 9905]
 gi|320183983|gb|EFW58807.1| tol-pal system protein YbgF [Shigella flexneri CDC 796-83]
 gi|320198138|gb|EFW72742.1| tol-pal system protein YbgF [Escherichia coli EC4100B]
 gi|323153742|gb|EFZ39989.1| tol-pal system protein YbgF [Escherichia coli EPECa14]
 gi|323158794|gb|EFZ44807.1| tol-pal system protein YbgF [Escherichia coli E128010]
 gi|323163901|gb|EFZ49711.1| tol-pal system protein YbgF [Shigella sonnei 53G]
 gi|323180018|gb|EFZ65574.1| tol-pal system protein YbgF [Escherichia coli 1180]
 gi|323185097|gb|EFZ70463.1| tol-pal system protein YbgF [Escherichia coli 1357]
 gi|323379455|gb|ADX51723.1| tol-pal system protein YbgF [Escherichia coli KO11]
 gi|323938281|gb|EGB34539.1| tol-pal system protein YbgF [Escherichia coli E1520]
 gi|323946992|gb|EGB43006.1| tol-pal system protein YbgF [Escherichia coli H120]
 gi|324116284|gb|EGC10205.1| tol-pal system protein YbgF [Escherichia coli E1167]
 gi|331065465|gb|EGI37358.1| putative periplasmic protein [Escherichia coli TA271]
 gi|331075917|gb|EGI47214.1| putative tol-pal system protein YbgF [Escherichia coli H591]
 gi|332093803|gb|EGI98857.1| tol-pal system protein YbgF [Shigella boydii 5216-82]
 gi|332096487|gb|EGJ01483.1| tol-pal system protein YbgF [Shigella dysenteriae 155-74]
 gi|332104761|gb|EGJ08107.1| tol-pal system protein YbgF [Shigella sp. D9]
 gi|332342079|gb|AEE55413.1| tol-pal system protein YbgF [Escherichia coli UMNK88]
          Length = 263

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 49/156 (31%), Gaps = 9/156 (5%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89
           +           +      +          Y  A+  +++++    A   F    +++P 
Sbjct: 116 SGAAASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPD 175

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +     +      + Y+ GK   AA      +  YP+S       + VG+        + 
Sbjct: 176 STYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGV--------IM 227

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            D+  T        +++ +Y  +   K A+  +   
Sbjct: 228 QDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM 263



 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      ++ Y +S Y+  A +++              G
Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWL--------------G 187

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           +    +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 188 QLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 247

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 248 PGTDGAKQAQK 258



 Score = 49.0 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I  YP+S  +    Y +G       +              Y + +V+ Y 
Sbjct: 160 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A F V V                  +G+   A   +Q V++ Y   + A++A 
Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257

Query: 231 ARL 233
            RL
Sbjct: 258 KRL 260


>gi|323170863|gb|EFZ56513.1| tol-pal system protein YbgF [Escherichia coli LT-68]
          Length = 254

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 49/156 (31%), Gaps = 9/156 (5%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89
           +           +      +          Y  A+  +++++    A   F    +++P 
Sbjct: 107 SGAAASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPD 166

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +     +      + Y+ GK   AA      +  YP+S       + VG+        + 
Sbjct: 167 STYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGV--------IM 218

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            D+  T        +++ +Y  +   K A+  +   
Sbjct: 219 QDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM 254



 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      ++ Y +S Y+  A +++               
Sbjct: 133 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLN----------- 181

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
                +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 182 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 238

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 239 PGTDGAKQAQK 249



 Score = 49.0 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I  YP+S  +    Y +G       +              Y + +V+ Y 
Sbjct: 151 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 202

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A F V V                  +G+   A   +Q V++ Y   + A++A 
Sbjct: 203 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 248

Query: 231 ARL 233
            RL
Sbjct: 249 KRL 251


>gi|331662102|ref|ZP_08363025.1| putative periplasmic protein [Escherichia coli TA143]
 gi|284920529|emb|CBG33591.1| putative tetratricopeptide repeat exported protein [Escherichia
           coli 042]
 gi|331060524|gb|EGI32488.1| putative periplasmic protein [Escherichia coli TA143]
          Length = 263

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 46/126 (36%), Gaps = 9/126 (7%)

Query: 61  YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A+  +++++    A   F    +++P +     +      + Y+ GK   AA     
Sbjct: 146 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       + VG+        +  D+  T        +++ +Y  +   K A+
Sbjct: 206 VVKNYPKSPKAADAMFKVGV--------IMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257

Query: 180 FYVTVG 185
             +   
Sbjct: 258 KRLNAM 263



 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      ++ Y +S Y+  A +++              G
Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWL--------------G 187

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           +    +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 188 QLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 247

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 248 PGTDGAKQAQK 258



 Score = 49.0 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I  YP+S  +    Y +G       +              Y + +V+ Y 
Sbjct: 160 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A F V V                  +G+   A   +Q V++ Y   + A++A 
Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257

Query: 231 ARL 233
            RL
Sbjct: 258 KRL 260


>gi|239908044|ref|YP_002954785.1| hypothetical protein DMR_34080 [Desulfovibrio magneticus RS-1]
 gi|239797910|dbj|BAH76899.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 435

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 44/134 (32%), Gaps = 8/134 (5%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           T    Q+  Y +A+        ++A   F+Q   + P + +   +L       ++ G Y 
Sbjct: 308 TASPAQKAEYNRALQLAINGRTAEAKTAFDQFLANHPSSPLTPNALYWVGEGAFAQGDYM 367

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            A +  ++    +P         Y + M+  +                  + R ++ Y N
Sbjct: 368 TAIADFDKVAKGWPGHHKAADSLYKMAMAQEKA--------GNMAAARASLERYLKDYPN 419

Query: 172 SPYVKGARFYVTVG 185
           +     AR  +   
Sbjct: 420 AELAAVARQKLQAL 433



 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 36/107 (33%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
              +A+       + +      +  +       +Y        + ++  A   F++ ++ 
Sbjct: 320 ALQLAINGRTAEAKTAFDQFLANHPSSPLTPNALYWVGEGAFAQGDYMTAIADFDKVAKG 379

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
           +P    A  SL   A  Q  AG    A +  E Y+  YP ++     
Sbjct: 380 WPGHHKAADSLYKMAMAQEKAGNMAAARASLERYLKDYPNAELAAVA 426


>gi|119944500|ref|YP_942180.1| TPR repeat-containing protein [Psychromonas ingrahamii 37]
 gi|119863104|gb|ABM02581.1| Tetratricopeptide TPR_2 repeat protein [Psychromonas ingrahamii 37]
          Length = 255

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 50/137 (36%), Gaps = 27/137 (19%)

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
            +A ++ +    V      Y QA +  E ++  YPES+ +   +Y +G+   Q       
Sbjct: 135 QLAYQAAVDLVLVN---KDYDQAITAFEAFVIDYPESEYIANSHYWLGLVLYQ------- 184

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR-YYLKRGEYVAA 209
            Q+  K        + E++  S     + F + +    L   E+   + +Y K       
Sbjct: 185 -QKKRKEARVAFLTVSEKFPESVKRADSLFKIGIIDEYLG--ELASAKEFYQK------- 234

Query: 210 IPRFQLVLANYSDAEHA 226
                 VL  Y ++  A
Sbjct: 235 ------VLKEYPNSSAA 245



 Score = 40.1 bits (93), Expect = 0.31,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 38/121 (31%), Gaps = 16/121 (13%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV-TVGRNQLAAKEVEIGRYY 200
            Q   D+    +     +      V  Y  S Y+  + +++  V   Q   KE  +    
Sbjct: 138 YQAAVDLVLVNKDYDQAITAFEAFVIDYPESEYIANSHYWLGLVLYQQKKRKEARVA--- 194

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
                       F  V   + ++    +++ ++      L  +  A+E    + + YP  
Sbjct: 195 ------------FLTVSEKFPESVKRADSLFKIGIIDEYLGELASAKEFYQKVLKEYPNS 242

Query: 261 Y 261
            
Sbjct: 243 S 243


>gi|313649615|gb|EFS14039.1| tol-pal system protein YbgF [Shigella flexneri 2a str. 2457T]
 gi|332761239|gb|EGJ91525.1| tol-pal system protein YbgF [Shigella flexneri 2747-71]
 gi|333021411|gb|EGK40661.1| tol-pal system protein YbgF [Shigella flexneri K-304]
          Length = 254

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 49/156 (31%), Gaps = 9/156 (5%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89
           +           +      +          Y  A+  +++++    A   F    +++P 
Sbjct: 107 SGATASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPD 166

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +     +      + Y+ GK   AA      +  YP+S       + VG+        + 
Sbjct: 167 STYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGV--------IM 218

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            D+  T        +++ +Y  +   K A+  +   
Sbjct: 219 QDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM 254



 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      ++ Y +S Y+  A +++              G
Sbjct: 133 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWL--------------G 178

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           +    +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 179 QLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 238

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 239 PGTDGAKQAQK 249



 Score = 49.0 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I  YP+S  +    Y +G       +              Y + +V+ Y 
Sbjct: 151 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 202

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A F V V                  +G+   A   +Q V++ Y   + A++A 
Sbjct: 203 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 248

Query: 231 ARL 233
            RL
Sbjct: 249 KRL 251


>gi|218962008|ref|YP_001741783.1| hypothetical protein; putative signal peptide [Candidatus
           Cloacamonas acidaminovorans]
 gi|167730665|emb|CAO81577.1| hypothetical protein; putative signal peptide [Candidatus
           Cloacamonas acidaminovorans]
          Length = 1953

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 29/82 (35%), Gaps = 1/82 (1%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y    + +A S  +  I  Y  S   D   Y +G+ Y  +  D    QR   L       
Sbjct: 651 YKESDFAEAISSYQRIIDNYKTSPYYDESLYRLGILYYYIATDADQPQRYYALATNCFDE 710

Query: 165 IVERYTNSPYVKGARFYVTVGR 186
           I+ +  NS Y   A +     R
Sbjct: 711 IINK-PNSKYQYDAIYQRGWLR 731



 Score = 44.0 bits (103), Expect = 0.021,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 51/132 (38%), Gaps = 23/132 (17%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV--EIGRYY--------------L 201
            L+   ++V+   N+  +  A + +    +QL+ + +     R+Y               
Sbjct: 592 ALESYRKVVQLDPNNVNIDAALYNIGFISSQLSHQRIGDNKARFYEINRTAVALDDASRY 651

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA-LMDEAREVVSLIQERY--- 257
           K  ++  AI  +Q ++ NY  + + +E++ RL   Y  +A   D+ +   +L    +   
Sbjct: 652 KESDFAEAISSYQRIIDNYKTSPYYDESLYRLGILYYYIATDADQPQRYYALATNCFDEI 711

Query: 258 ---PQGYWARYV 266
              P   +    
Sbjct: 712 INKPNSKYQYDA 723



 Score = 35.9 bits (82), Expect = 5.5,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 90   AGVARKSLLMSAFVQY-SAGKYQQAASLGEEYITQYPESKNV 130
              +   +LL  A + Y  A    +A      +IT YP ++NV
Sbjct: 1310 GNITPDALLAKAAILYSEAENKDKAVETYNRFITLYPNNENV 1351


>gi|84500891|ref|ZP_00999126.1| TPR domain protein [Oceanicola batsensis HTCC2597]
 gi|84390958|gb|EAQ03376.1| TPR domain protein [Oceanicola batsensis HTCC2597]
          Length = 151

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 39/127 (30%), Gaps = 18/127 (14%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLG 117
           +  +    L+      A  +F+      P FA    R++        Y   ++  A S  
Sbjct: 34  LMSRGQDALEAGEVETAIGHFSALIDHAPDFAEAWHRRAT-----AFYRQEEFGLAISDL 88

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
              +   P+  N     Y +G+    + R  P          +  S+++E Y        
Sbjct: 89  GRALALNPQHFN---AMYGLGVILESLDRPDP--------AFRAYSQVLELYPTHERALE 137

Query: 178 ARFYVTV 184
           A   +  
Sbjct: 138 AVDRLQA 144


>gi|332097655|gb|EGJ02630.1| tol-pal system protein YbgF [Shigella boydii 3594-74]
 gi|333007347|gb|EGK26827.1| tol-pal system protein YbgF [Shigella flexneri VA-6]
 gi|333010139|gb|EGK29574.1| tol-pal system protein YbgF [Shigella flexneri K-272]
 gi|333021091|gb|EGK40348.1| tol-pal system protein YbgF [Shigella flexneri K-227]
          Length = 254

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 49/156 (31%), Gaps = 9/156 (5%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89
           +           +      +          Y  A+  +++++    A   F    +++P 
Sbjct: 107 SGAAASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPD 166

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +     +      + Y+ GK   AA      +  YP+S       + VG+        + 
Sbjct: 167 STYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGV--------IM 218

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            D+  T        +++ +Y  +   K A+  +   
Sbjct: 219 QDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM 254



 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      ++ Y +S Y+  A +++              G
Sbjct: 133 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWL--------------G 178

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           +    +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 179 QLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 238

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 239 PGTDGAKQAQK 249



 Score = 49.0 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I  YP+S  +    Y +G       +              Y + +V+ Y 
Sbjct: 151 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 202

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A F V V                  +G+   A   +Q V++ Y   + A++A 
Sbjct: 203 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 248

Query: 231 ARL 233
            RL
Sbjct: 249 KRL 251


>gi|300871531|ref|YP_003786404.1| putative hemolysin [Brachyspira pilosicoli 95/1000]
 gi|300689232|gb|ADK31903.1| putative hemolysin [Brachyspira pilosicoli 95/1000]
          Length = 346

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 44/126 (34%), Gaps = 9/126 (7%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A     ++N+ KA  Y+N+ +  FP      ++L       Y+   Y  A       +  
Sbjct: 226 AHRMYVQKNYVKARMYYNKIATLFPRTKYQEEALFKIGESYYNEKNYNSAVDYFNR-VRL 284

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
                        +G+SY ++ R             + +   V  Y ++P V  A+ Y+ 
Sbjct: 285 NNVYTLDAEALLYIGLSYFKVGRYSD--------SYKALDTFVNTYPDNPNVSRAKDYMA 336

Query: 184 VGRNQL 189
             +  L
Sbjct: 337 ALQETL 342



 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 39/84 (46%), Gaps = 2/84 (2%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           +  +++    +  E+N++ A +YFN+   +  +   A  +LL      +  G+Y  +   
Sbjct: 256 EEALFKIGESYYNEKNYNSAVDYFNRVRLNNVYTLDAE-ALLYIGLSYFKVGRYSDSYKA 314

Query: 117 GEEYITQYPESKNVDYVY-YLVGM 139
            + ++  YP++ NV     Y+  +
Sbjct: 315 LDTFVNTYPDNPNVSRAKDYMAAL 338



 Score = 45.5 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 69/201 (34%), Gaps = 30/201 (14%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
                 E+ + +A  YF +             ++L  A V ++  +Y +A  + E+++  
Sbjct: 153 GYQLFFEKKYGEALSYFLRSD--------GELAVLGRARVYFAMNEYDRAFEIYEDFLKY 204

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYD---QRATKLMLQYMSRIVERYTNSPYVKGARF 180
           Y  S      Y  V  +Y   +  + +    Q+       Y ++I   +  + Y + A F
Sbjct: 205 YNTSIY----YNEVSRTYLIQVPAIAHRMYVQKNYVKARMYYNKIATLFPRTKYQEEALF 260

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
                          IG  Y     Y +A+  F  V  N      A EA+  +  +Y  +
Sbjct: 261 K--------------IGESYYNEKNYNSAVDYFNRVRLNNVYTLDA-EALLYIGLSYFKV 305

Query: 241 ALMDEAREVVSLIQERYPQGY 261
               ++ + +      YP   
Sbjct: 306 GRYSDSYKALDTFVNTYPDNP 326



 Score = 41.3 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/114 (13%), Positives = 40/114 (35%), Gaps = 10/114 (8%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              +     ++ Y  S Y         +    +A   + + + Y+K   Y      +  +
Sbjct: 193 RAFEIYEDFLKYYNTSIYYNEVSRTYLIQVPAIA-HRMYVQKNYVKARMY------YNKI 245

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
              +   ++ EEA+ ++ E+Y      + A +  + ++       +    E L+
Sbjct: 246 ATLFPRTKYQEEALFKIGESYYNEKNYNSAVDYFNRVRLN---NVYTLDAEALL 296


>gi|238924772|ref|YP_002938288.1| hypothetical protein EUBREC_2423 [Eubacterium rectale ATCC 33656]
 gi|238876447|gb|ACR76154.1| Hypothetical protein EUBREC_2423 [Eubacterium rectale ATCC 33656]
          Length = 320

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 47/244 (19%), Positives = 78/244 (31%), Gaps = 36/244 (14%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
            ALT+   +    L G           D   D    R+     +  ++  ++  A + F 
Sbjct: 7   MALTLTVVLTAGMLTGCGSG-------DKAKDKDAYRQY---GINCIENGSYDDAVDAFQ 56

Query: 82  QCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           +       +  A    L   +     QY +G    A       I     +K+ D  YYL 
Sbjct: 57  KALDQSVGSVGAE--ELDICYYKAKAQYLSGDVDGAIDTYTAIID---YNKDSD-AYYLR 110

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERY-----TNSPYV--KGARFYVT---VGRN 187
           G  Y     D     +  K  L   +   E Y     T S Y      + Y+      + 
Sbjct: 111 GCIYFAK-NDSDKGLKDFKTALSENNDNYELYLGVYETLSKYGMNDQGKEYLDNALKLKA 169

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
           + A   ++ GR Y   G+Y +AI   Q  +      E   +A   + E Y      D ++
Sbjct: 170 KTADDYMQRGRIYTMLGDYDSAIKSLQKAID-----EKLVKANYYMGEVYQKKGDNDSSQ 224

Query: 248 EVVS 251
           +   
Sbjct: 225 KYFK 228



 Score = 42.8 bits (100), Expect = 0.052,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 25/76 (32%), Gaps = 7/76 (9%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           E+       +   N+  A  YF    +           ++           +G +  A S
Sbjct: 240 ELMNMGQAQMDNGNYDTAITYFQNALELESV----PNKQQITKAMIIAYEYSGDFATAKS 295

Query: 116 LGEEYITQYPESKNVD 131
             EEY+  YP+ ++  
Sbjct: 296 KMEEYMKDYPDDEDAA 311


>gi|254453620|ref|ZP_05067057.1| tetratricopeptide TPR_2 [Octadecabacter antarcticus 238]
 gi|198268026|gb|EDY92296.1| tetratricopeptide TPR_2 [Octadecabacter antarcticus 238]
          Length = 261

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 44/129 (34%), Gaps = 8/129 (6%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           ++E + +A   L   NF  A +     +  +P + VA  + L+        G+   AA  
Sbjct: 138 EQEDFTRAQEALASGNFRGAVDLLATFNETYPGSPVAADAHLLRGQAYEQMGETTNAARA 197

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
                +  PE          +G S A + +         +     +  +  R+  +P V 
Sbjct: 198 YLAAFSGNPEGPLAPAALTKLGQSLAALGQQ--------QDACVTLGEVGTRFPGAPKVG 249

Query: 177 GARFYVTVG 185
            AR  +   
Sbjct: 250 EARQAMASL 258



 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 37/118 (31%), Gaps = 19/118 (16%)

Query: 147 DVPYDQRA-----TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
           D    Q A      +  +  ++   E Y  SP    A         Q+        R   
Sbjct: 141 DFTRAQEALASGNFRGAVDLLATFNETYPGSPVAADAHLLRGQAYEQMGET-TNAAR--- 196

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
               Y+AA        +   +   A  A+ +L ++  AL    +A   +  +  R+P 
Sbjct: 197 ---AYLAA-------FSGNPEGPLAPAALTKLGQSLAALGQQQDACVTLGEVGTRFPG 244


>gi|170682384|ref|YP_001742853.1| tol-pal system protein YbgF [Escherichia coli SMS-3-5]
 gi|170520102|gb|ACB18280.1| tol-pal system protein YbgF [Escherichia coli SMS-3-5]
          Length = 263

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 49/156 (31%), Gaps = 9/156 (5%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89
           +           +      +          Y  A+  +++++    A   F    +++P 
Sbjct: 116 SGAAASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPD 175

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +     +      + Y+ GK   AA      +  YP+S       + VG+        + 
Sbjct: 176 STYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGV--------IM 227

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            D+  T        +++ +Y  +   K A+  +   
Sbjct: 228 QDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM 263



 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      ++ Y +S Y+  A +++               
Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLN----------- 190

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
                +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 191 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 247

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 248 PGTDGAKQAQK 258



 Score = 48.6 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I  YP+S  +    Y +G       +              Y + +V+ Y 
Sbjct: 160 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A F V V                  +G+   A   +Q V++ Y   + A++A 
Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257

Query: 231 ARL 233
            RL
Sbjct: 258 KRL 260


>gi|148265114|ref|YP_001231820.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4]
 gi|146398614|gb|ABQ27247.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4]
          Length = 1108

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 61/146 (41%), Gaps = 23/146 (15%)

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           +A +L ++ + +YP     D V Y +  +Y ++          T+  +  M R+V  + +
Sbjct: 203 EAIALYKKLLDKYPLYPGNDQVLYQMSRAYEEL--------GQTEDAMGVMDRLVRDFPH 254

Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
           SPY+   RF                  ++  R  Y+ A   ++ ++   + + + E A+ 
Sbjct: 255 SPYIDEVRFRR--------------AEFFFTRKRYLDAEAAYKSIVDMGAGSPYYELALY 300

Query: 232 RLVEAYVALALMDEA-REVVSLIQER 256
           +L   +    L +E  +  ++L+  +
Sbjct: 301 KLGWTFYKQELYEEGLQRFIALLDRK 326



 Score = 44.0 bits (103), Expect = 0.022,   Method: Composition-based stats.
 Identities = 18/121 (14%), Positives = 39/121 (32%), Gaps = 8/121 (6%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           E     L+     +A   + +    +P      + L   +      G+ + A  + +  +
Sbjct: 190 EAGTEDLERAGTREAIALYKKLLDKYPLYPGNDQVLYQMSRAYEELGQTEDAMGVMDRLV 249

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
             +P S  +D V +     +    R +                IV+    SPY + A + 
Sbjct: 250 RDFPHSPYIDEVRFRRAEFFFTRKRYLD--------AEAAYKSIVDMGAGSPYYELALYK 301

Query: 182 V 182
           +
Sbjct: 302 L 302



 Score = 42.0 bits (98), Expect = 0.085,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 24/54 (44%)

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           AI  ++ +L  Y      ++ + ++  AY  L   ++A  V+  +   +P   +
Sbjct: 204 AIALYKKLLDKYPLYPGNDQVLYQMSRAYEELGQTEDAMGVMDRLVRDFPHSPY 257



 Score = 39.7 bits (92), Expect = 0.40,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 55/183 (30%), Gaps = 24/183 (13%)

Query: 45  DVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           D  +       Y  EV + +A  F   + +  A   +         +     +L    + 
Sbjct: 246 DRLVRDFPHSPYIDEVRFRRAEFFFTRKRYLDAEAAYKSIVDMGAGSPYYELALYKLGWT 305

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
            Y    Y++     + +I      + V       G  +AQ   D+       K +     
Sbjct: 306 FYKQELYEEGL---QRFIAL--LDRKVA-----TGYDFAQTKDDLER-----KRVDDAFR 350

Query: 164 RIVERYTNSPYVKGARFYVTVG-RNQLAAKEVEI----GRYYLKRGEYVAAIPRFQLVLA 218
            I + +    Y++GA   +     N   + E  I    G +Y  +  Y  A   +   + 
Sbjct: 351 VISQSF---SYLRGADSVMEYFDTNGKRSYEDRIYSNLGEFYFDKRRYSDAAAAYNAFVT 407

Query: 219 NYS 221
              
Sbjct: 408 RNP 410



 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 42/131 (32%), Gaps = 14/131 (10%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A   ++ +++  A          FP   +  +     A+V    GK   AA   E  
Sbjct: 726 YDAAAALIQLKDWKMAATVLVGFRDLFPGHQLQPEVTRKIAYVYKEDGKLSLAADEYERV 785

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
             ++ + + V       G     +  ++      +K  L    R V  +           
Sbjct: 786 EREF-KDEEV-----RRGA--LMLAAELHQQTGNSKQALAVYRRFVGSFPQ---PVEVNL 834

Query: 181 YVTVGRNQLAA 191
            +   RN++A 
Sbjct: 835 EM---RNKIAE 842



 Score = 35.1 bits (80), Expect = 9.5,   Method: Composition-based stats.
 Identities = 12/88 (13%), Positives = 33/88 (37%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
            + +Y+ +  + +      A    ++  RDFP +    +     A   ++  +Y  A + 
Sbjct: 222 DQVLYQMSRAYEELGQTEDAMGVMDRLVRDFPHSPYIDEVRFRRAEFFFTRKRYLDAEAA 281

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQM 144
            +  +     S   +   Y +G ++ + 
Sbjct: 282 YKSIVDMGAGSPYYELALYKLGWTFYKQ 309


>gi|260431106|ref|ZP_05785077.1| tetratricopeptide TPR_2 repeat protein [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260414934|gb|EEX08193.1| tetratricopeptide TPR_2 repeat protein [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 274

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 16/132 (12%), Positives = 48/132 (36%), Gaps = 14/132 (10%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           +++ ++ A+  L + +F  A +   Q    +P + +A ++ L       + G  ++AA  
Sbjct: 151 EQDDFDTALQALADGDFQTAADLLAQFDTKYPGSPLAPEASLRRGQALEALGDTREAARA 210

Query: 117 GEEYITQYPES---KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
              ++  +             Y +G +  ++           +     +  +  R+ +S 
Sbjct: 211 ---FLASFTGDSEGPLAPEALYELGAALGRL--------GQVEQACITLGEVAARFPDSA 259

Query: 174 YVKGARFYVTVG 185
           +V  +   +   
Sbjct: 260 FVAASTQEMASL 271



 Score = 40.5 bits (94), Expect = 0.24,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 35/113 (30%), Gaps = 20/113 (17%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              +     +++   +Y  SP    A          L             R         
Sbjct: 165 GDFQTAADLLAQFDTKYPGSPLAPEASLRRGQALEALGD----------TREA------- 207

Query: 213 FQLVLANY---SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
            +  LA++   S+   A EA+  L  A   L  +++A   +  +  R+P   +
Sbjct: 208 ARAFLASFTGDSEGPLAPEALYELGAALGRLGQVEQACITLGEVAARFPDSAF 260


>gi|149178735|ref|ZP_01857318.1| hypothetical protein PM8797T_01479 [Planctomyces maris DSM 8797]
 gi|148842433|gb|EDL56813.1| hypothetical protein PM8797T_01479 [Planctomyces maris DSM 8797]
          Length = 867

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 40/307 (13%), Positives = 92/307 (29%), Gaps = 84/307 (27%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
           ++++  + +  + + ++  + L+     +A  +F +   ++P    A ++  +   V   
Sbjct: 530 FINTNPEKQMPQALVQRGEILLELDRLDEAINHFERVMTNYPTDVSAFEAQYLLGIVYLE 589

Query: 107 AGKYQQAASLGEEYI---TQYPESKNVDYVYYLVGMSYAQMIR----------------- 146
             +  QA ++ +E +      P++K      + +G       +                 
Sbjct: 590 KNELDQAQAVWKEILESSQLTPKAKQWGDALFSLGKLNFHQGKIAESEKQSETAEDAPEG 649

Query: 147 --DVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR---------------FYVTVGRNQL 189
                   R  +   + ++  V+RY  S  +  AR                 +   R   
Sbjct: 650 QITGSRQNRYYEEATRRLTEYVKRYPESEKISEARYLLARSLQNLSDQPLREMKEARTDN 709

Query: 190 AAKEVEIGRY-----------YLKR---------------------------------GE 205
           A +E++  ++           YL R                                  E
Sbjct: 710 ARQELKRKQFGYLNQALTQLQYLNRDLRQLENRDRLDALGKQLLKSSCFGKAHILYLTEE 769

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR---EVVSLIQERYPQGYW 262
           Y  AI  +   +  Y        A  ++   Y AL   +EA+   E   +I ++ P   +
Sbjct: 770 YAEAIKSYHDAVNRYPQCTEVLIAYMKMSGCYEALGKKNEAKSMLEQAKIILKQMPDSVF 829

Query: 263 ARYVETL 269
                 L
Sbjct: 830 ESGATNL 836


>gi|32473196|ref|NP_866190.1| signal peptide [Rhodopirellula baltica SH 1]
 gi|32397875|emb|CAD73876.1| hypothetical protein-transmembrane regio and signal peptide
           prediction [Rhodopirellula baltica SH 1]
          Length = 404

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 85/223 (38%), Gaps = 21/223 (9%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           +  D  ++  +++ +   L  +    A    +Q   D P   +A  + + +A      G 
Sbjct: 170 ATQDDWFKFNLFDASRPRLDAE--GHAVRVLDQIRYDNPTGRLADDATMAAAVEYMRQGD 227

Query: 110 YQQAASLGEEYIT----QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
           ++      +E++T     +PES +    + +      ++     Y     +   + + + 
Sbjct: 228 FE----TADEFLTDLRETFPESDHFFNAHLMGIRCKLEVFAGPKYSGLMLEEADKLVRQT 283

Query: 166 VERYTN-------SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
            ER+ +       S  V  A   V   R   A K  +   Y  KR EY AA   +Q++L 
Sbjct: 284 RERFPDRLRDPETSEMVARAAAEVAYRR---AEKLNDRAIYREKRSEYGAARLHYQMILR 340

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +Y     A+ A  RL EA  +   +   R   +L++  +P   
Sbjct: 341 DYPSTPFADRARQRL-EAITSYPDVPAERVSATLLKRIFPDSR 382



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/254 (13%), Positives = 87/254 (34%), Gaps = 59/254 (23%)

Query: 50  SVTDVRYQREVYEKAVLFL-------------------KEQNFSKAYEYFNQCSRDFPFA 90
              +    R++Y++A                       ++++F++A + F + +   P  
Sbjct: 51  EQPNAERARDLYQEADQLFRGAASRFNQTERDGEAEGTEKKDFARAAKLFARAADAQPGT 110

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV--------YYLVGMSYA 142
            +A+ ++ M A   + + +   AA + E    ++P +++VD           Y +    A
Sbjct: 111 ALAQDAMFMQAESLFFSDQLPDAADVYERLNKEFPNNRHVDQAAARAFAISQYWIDTEVA 170

Query: 143 QMIR-------DVPYDQRATK-LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
                      D    +   +   ++ + +I            A               +
Sbjct: 171 TQDDWFKFNLFDASRPRLDAEGHAVRVLDQIRYDNPTGRLADDAT--------------M 216

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA---------YVALALMDE 245
                Y+++G++  A      +   + +++H   A    +           Y  L +++E
Sbjct: 217 AAAVEYMRQGDFETADEFLTDLRETFPESDHFFNAHLMGIRCKLEVFAGPKYSGL-MLEE 275

Query: 246 AREVVSLIQERYPQ 259
           A ++V   +ER+P 
Sbjct: 276 ADKLVRQTRERFPD 289


>gi|134095786|ref|YP_001100861.1| hypothetical protein HEAR2618 [Herminiimonas arsenicoxydans]
 gi|133739689|emb|CAL62740.1| Conserved hypothetical protein; putative membrane protein; putative
           TPR repeat [Herminiimonas arsenicoxydans]
          Length = 582

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 52/123 (42%), Gaps = 10/123 (8%)

Query: 23  ALTIFFSIAVCFLVGWERQSS--RDVYLD--SVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
              IFF +A   L     ++S  +D      S + +   R  Y +   +L+E+ +++A +
Sbjct: 401 VFAIFFLLARERLTSLATEASVWKDAASKLVSPSLIGSDRIFYNRGRAYLQEKKYAEAID 460

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            F+   +    +    ++    A   YS  KY +A +     +     ++N  Y+ YL G
Sbjct: 461 DFSHTIQQ---SPRVSQAYYNRALAYYSLEKYPEAMADLNHALLL---NENNAYIQYLRG 514

Query: 139 MSY 141
           + +
Sbjct: 515 LVF 517


>gi|108763880|ref|YP_632213.1| transglycosylase SLT domain-containing protein [Myxococcus xanthus
           DK 1622]
 gi|108467760|gb|ABF92945.1| transglycosylase SLT domain protein [Myxococcus xanthus DK 1622]
          Length = 711

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 37/118 (31%), Gaps = 7/118 (5%)

Query: 68  LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
           L+   F+ A + F      +P +    + +   A       +Y +A +  + ++T YP+S
Sbjct: 332 LQAGRFADAVQAFTAFETRYPRSRRRDEGMWFRALAHLRQEEYAKARAALDAFLTAYPKS 391

Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
                  Y        M R    D      +      ++     S Y   A   +   
Sbjct: 392 NMGPQARY-------WMARSRELDGAKADTLGPAYEAVITSAPASFYALMANERLKAL 442


>gi|196228135|ref|ZP_03127002.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
           Ellin428]
 gi|196227538|gb|EDY22041.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
           Ellin428]
          Length = 844

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 63/188 (33%), Gaps = 26/188 (13%)

Query: 45  DVYLDSVTDVRYQRE-VYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSA 101
           D YL +  D   + E +  KA +  K++++  A   ++             A  +L    
Sbjct: 406 DKYLAANPDADKRDEALLMKAEILFKKEDWEGAMAIYSTLELSHQLTGNRKAE-ALFRLG 464

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           + Q  A   + A      + T YP  K V Y     G++   +        +     L+ 
Sbjct: 465 WCQLQAKNTEAAIKTFTSFATAYPTHKLVPYALLQRGLAEQSL--------KNLTGALKD 516

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
             +I++ +  +P  + A     +   Q              +G   A    F+ +L  + 
Sbjct: 517 YEQIIKSFPKAPQRELALQQKALIEGQ--------------QGNNSAMALSFKQLLKEFP 562

Query: 222 DAEHAEEA 229
           +     +A
Sbjct: 563 ETAARAQA 570



 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/217 (11%), Positives = 63/217 (29%), Gaps = 46/217 (21%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
             +  D   DV+ Q  +   A    +    ++A   F + SR+FP +   +++       
Sbjct: 334 NKMDKDVSPDVKPQLLLLA-ANASRQLNKMAEALNLFGEVSREFPGSVYDKEAQYERLRT 392

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR----------------- 146
            Y+A          ++Y+   P++   D    +      +                    
Sbjct: 393 LYAAND-ASLVGEIDKYLAANPDADKRDEALLMKAEILFKKEDWEGAMAIYSTLELSHQL 451

Query: 147 -------------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
                              + T+  ++  +     Y     V  A     + +  LA + 
Sbjct: 452 TGNRKAEALFRLGWCQLQAKNTEAAIKTFTSFATAYPTHKLVPYA-----LLQRGLAEQS 506

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
           +              A+  ++ ++ ++  A   E A+
Sbjct: 507 L---------KNLTGALKDYEQIIKSFPKAPQRELAL 534



 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/168 (13%), Positives = 46/168 (27%), Gaps = 22/168 (13%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
            L  A   Y   +Y+ AA   E+Y+  Y  + +     + +G  Y               
Sbjct: 89  QLSLADNYYEKKQYEMAAPEYEKYLGLYKNAPDTATALFRLGECY--------RHIGNVN 140

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                   ++ ++ +  ++  A + +                 Y    +Y  A+  ++  
Sbjct: 141 SAKNAYETLLAQFASGEFIGPASYRL--------------ADLYYADKQYRDALTLYRKA 186

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
                +   A  A         AL    EAR     +        +  
Sbjct: 187 SVRLREPAVANAAKFFTGRCLEALGQKMEARGTYEDLVSSEKDNPFYD 234


>gi|89890624|ref|ZP_01202134.1| conserved hypothetical protein, TPR domain [Flavobacteria bacterium
           BBFL7]
 gi|89517539|gb|EAS20196.1| conserved hypothetical protein, TPR domain [Flavobacteria bacterium
           BBFL7]
          Length = 1006

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 83/233 (35%), Gaps = 48/233 (20%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +YE    ++   N  K  + +++   +FP +    ++++      Y+  K   A  + ++
Sbjct: 613 LYELGNTYINTNNVDKGIQTYDRLINEFPKSSYTSQAMMRKGLQLYNDSKLDDALVVFKD 672

Query: 120 YITQYPESKNV------------------DYVYYLVGMSYAQMIRDVPYDQRATKLMLQ- 160
            ++ YP +                     DY  ++  + +   + D   D  A +   Q 
Sbjct: 673 VVSTYPGTPQANEAVSSARLIYVDQNRTNDYAAWVRTLDFVD-VSDSELDDTAYESAEQP 731

Query: 161 -----------YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
                       M + +  Y N  +   A FY+         K+  I  Y          
Sbjct: 732 YLQNDMSGTTRSMRKYLAEYPNGKHALQAHFYLAQALFSQDKKQESIASY---------- 781

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE--RYPQG 260
               + V+     +E  E+A+ARL E Y+      +A  V++ +++   +PQ 
Sbjct: 782 ----EYVINK-ERSEFTEQALARLSEIYLGDKAYAKAIPVLTQLEQLADFPQN 829



 Score = 42.8 bits (100), Expect = 0.047,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 58/203 (28%), Gaps = 52/203 (25%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF-----VQYSAGKYQQAAS 115
           Y+ A    K ++++ A   F   ++          + L  A+       + + +Y  A  
Sbjct: 502 YDLAYTQFKLKDYTNAINTFTAYTKQ--SGIDNEPARLNDAYLRIGDANFVSKQYWPAME 559

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSY-----------------AQMIRDVPYDQ------ 152
              + I+      N DY  +   +SY                  +  R    D       
Sbjct: 560 AYNKSISMN--GFNADYAAFQKAISYGFVGKNDRKIEDLNGFLNKFNRSAYRDDVLYELG 617

Query: 153 ------RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
                       +Q   R++  +  S Y   A     +   QL               + 
Sbjct: 618 NTYINTNNVDKGIQTYDRLINEFPKSSYTSQAMMRKGL---QL-----------YNDSKL 663

Query: 207 VAAIPRFQLVLANYSDAEHAEEA 229
             A+  F+ V++ Y     A EA
Sbjct: 664 DDALVVFKDVVSTYPGTPQANEA 686



 Score = 42.0 bits (98), Expect = 0.093,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 56/186 (30%), Gaps = 31/186 (16%)

Query: 64  AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
                 +  + +A  Y  +              +       +  Y  G +++A     + 
Sbjct: 250 GQSLFNQGKYDQALPYLEEYKGVRGRLNNNDYYQ-----LGYAYYKQGDFEKAIETFNKI 304

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +    E+K     YY +  SY ++ +         +  L    +  E   ++   + A +
Sbjct: 305 VDG--ENKTAQNAYYHLAQSYIKLNKS--------EDALNAFKKASEMDFDTQIQQDASY 354

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
                     + E   G  Y       A I  +   L  Y D +   E    L+++Y + 
Sbjct: 355 NYAKI-----SYEY--GNPY---DSVPAVILAY---LEKYPDTDKNAEMNEFLIDSYFSS 401

Query: 241 ALMDEA 246
               EA
Sbjct: 402 KNYTEA 407



 Score = 39.7 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 64/219 (29%), Gaps = 23/219 (10%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           +S +  ++       ++ +   + ++L ++ ++KA     Q  +   F      +     
Sbjct: 779 ASYEYVINKERSEFTEQALARLSEIYLGDKAYAKAIPVLTQLEQLADFPQNVIYAQSNLM 838

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
              Y    Y Q+ S                       +S   +  +V  D     +    
Sbjct: 839 KAYYEQENYDQSVSYAN------------------KVLSDLTISDNVKSDANVI-IARSS 879

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
                E    + Y       +       A        +  K G Y AAI   Q +  NY+
Sbjct: 880 WKTGNEAAAKTAYET---VRLNASGTLAAEATYFKAYFEHKAGNYDAAIATVQSLTKNYA 936

Query: 222 DAE-HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
             +    + +  + + Y A      A  ++  +   + Q
Sbjct: 937 GYKLWTSKGLVIMGKCYNAQGQTLNATTILEYVVGNFAQ 975



 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 54/193 (27%), Gaps = 26/193 (13%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
               +  E  N     F  +      L        +     +     +  I ++P+S   
Sbjct: 587 GKNDRKIEDLNGFLNKFNRSAYRDDVLYELGNTYINTNNVDKGIQTYDRLINEFPKSSYT 646

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA--RFYVTVGRNQ 188
                  G+   Q+  D   D       L     +V  Y  +P    A     +      
Sbjct: 647 SQAMMRKGL---QLYNDSKLD-----DALVVFKDVVSTYPGTPQANEAVSSARLIYVDQN 698

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
                        +  +Y AA  R    + + SD+E  + A     + Y+   +    R 
Sbjct: 699 -------------RTNDY-AAWVRTLDFV-DVSDSELDDTAYESAEQPYLQNDMSGTTRS 743

Query: 249 VVSLIQERYPQGY 261
           +   + E YP G 
Sbjct: 744 MRKYLAE-YPNGK 755


>gi|331672264|ref|ZP_08373055.1| putative tol-pal system protein YbgF [Escherichia coli TA280]
 gi|331070459|gb|EGI41823.1| putative tol-pal system protein YbgF [Escherichia coli TA280]
          Length = 263

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 19/156 (12%), Positives = 49/156 (31%), Gaps = 9/156 (5%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89
           +           +      +          Y  A+  +++++    A   F    +++P 
Sbjct: 116 SGAATSTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPD 175

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +     +      + Y+ GK   AA      +  YP+S       + VG+        + 
Sbjct: 176 STYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGV--------IM 227

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            D+  +        +++ +Y  +   K A+  +   
Sbjct: 228 QDKGDSAKAKAVYQQVISKYPGTDGAKQAQKRLNAM 263



 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      ++ Y +S Y+  A +++               
Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLN----------- 190

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
                +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 191 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDSAKAKAVYQQVISKY 247

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 248 PGTDGAKQAQK 258



 Score = 49.0 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I  YP+S  +    Y +G       +              Y + +V+ Y 
Sbjct: 160 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A F V V                  +G+   A   +Q V++ Y   + A++A 
Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDSAKAKAVYQQVISKYPGTDGAKQAQ 257

Query: 231 ARL 233
            RL
Sbjct: 258 KRL 260


>gi|317052374|ref|YP_004113490.1| cell wall hydrolase/autolysin [Desulfurispirillum indicum S5]
 gi|316947458|gb|ADU66934.1| cell wall hydrolase/autolysin [Desulfurispirillum indicum S5]
          Length = 628

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 42/121 (34%), Gaps = 19/121 (15%)

Query: 117 GEEYITQY---PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
            E +   Y   P+S       Y  G +Y ++ R    D    +  L     +  RY +S 
Sbjct: 58  IEGFELFYLNRPDSPLAPEAMYNAGDAYFRLYRLSSKD-YDLEQSLSTFRTLPRRYADSE 116

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE-YVAAIPRFQLVLANYSDAEHAEEAMAR 232
               A                + GR Y +     + A   ++ ++  Y  ++ A +A+ R
Sbjct: 117 KAPDAA--------------FQAGRIYEEEKNDILLAARLYEQLIERYPRSQAAVDALQR 162

Query: 233 L 233
           L
Sbjct: 163 L 163



 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 41/123 (33%), Gaps = 14/123 (11%)

Query: 73  FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY-------SAGKYQQAASLGEEYITQYP 125
           + K  E F     + P + +A +++  +    +            +Q+ S       +Y 
Sbjct: 54  WLKVIEGFELFYLNRPDSPLAPEAMYNAGDAYFRLYRLSSKDYDLEQSLSTFRTLPRRYA 113

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           +S+      +  G  Y +   D+        L  +   +++ERY  S     A   +   
Sbjct: 114 DSEKAPDAAFQAGRIYEEEKNDI-------LLAARLYEQLIERYPRSQAAVDALQRLDAM 166

Query: 186 RNQ 188
            + 
Sbjct: 167 GDI 169


>gi|262193823|ref|YP_003265032.1| tol-pal system protein YbgF [Haliangium ochraceum DSM 14365]
 gi|262077170|gb|ACY13139.1| tol-pal system protein YbgF [Haliangium ochraceum DSM 14365]
          Length = 343

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 28/87 (32%), Gaps = 8/87 (9%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
             GK+  A +  + ++  YP     D   Y +G S          D++  +  L     +
Sbjct: 233 RDGKHDAAEAGFQAFLDMYPRHDLSDNAQYWLGESLY--------DRKQYREALAAFLAV 284

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAK 192
            +R+     V  A       R  L   
Sbjct: 285 KQRFPRGNKVPDALLKAGFCRIALGEH 311



 Score = 51.7 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/133 (10%), Positives = 36/133 (27%), Gaps = 16/133 (12%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
              +Y + +  L++     A   F      +P   ++  +        Y   +Y++A + 
Sbjct: 221 PAGLYRRHLEALRDGKHDAAEAGFQAFLDMYPRHDLSDNAQYWLGESLYDRKQYREALAA 280

Query: 117 G----EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
                + +    P    V       G     +                 ++ ++E +  S
Sbjct: 281 FLAVKQRF----PRGNKVPDALLKAGFCRIALGEHA--------QARAALAHVIELFPES 328

Query: 173 PYVKGARFYVTVG 185
                A   +   
Sbjct: 329 QPAAIAAERLESL 341



 Score = 39.3 bits (91), Expect = 0.57,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 41/128 (32%), Gaps = 22/128 (17%)

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
            Y     + + +RD  +D              ++ Y        A++++           
Sbjct: 224 LYRR---HLEALRDGKHD-----AAEAGFQAFLDMYPRHDLSDNAQYWLGESL------- 268

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
                    R +Y  A+  F  V   +       +A+ +     +AL    +AR  ++ +
Sbjct: 269 -------YDRKQYREALAAFLAVKQRFPRGNKVPDALLKAGFCRIALGEHAQARAALAHV 321

Query: 254 QERYPQGY 261
            E +P+  
Sbjct: 322 IELFPESQ 329


>gi|300715891|ref|YP_003740694.1| conserved uncharacterized protein [Erwinia billingiae Eb661]
 gi|299061727|emb|CAX58843.1| conserved uncharacterized protein [Erwinia billingiae Eb661]
          Length = 272

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 41/114 (35%), Gaps = 9/114 (7%)

Query: 61  YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  AV   L+++   +A   F    + +P +     +      + Y+ GK   AA     
Sbjct: 155 YNAAVALVLEKKQNEQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFAT 214

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
            +  YP+S       Y VG+        +  ++  T        ++ + Y NS 
Sbjct: 215 VVKNYPKSPKSPDALYKVGV--------IMQEKGDTAKAKAVYQQVSKLYPNSD 260



 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/124 (12%), Positives = 42/124 (33%), Gaps = 14/124 (11%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  +++  +  +      V++Y +S Y   A +++               
Sbjct: 151 ANTDYNAAVALVLEKKQNEQAISAFQAFVKKYPDSTYQPNANYWLGQLN----------- 199

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
                +G+   A   F  V+ NY  +  + +A+ ++           +A+ V   + + Y
Sbjct: 200 ---YNKGKKDDAAYYFATVVKNYPKSPKSPDALYKVGVIMQEKGDTAKAKAVYQQVSKLY 256

Query: 258 PQGY 261
           P   
Sbjct: 257 PNSD 260



 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 29/83 (34%), Gaps = 1/83 (1%)

Query: 46  VYLDSVTDVRY-QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
            ++    D  Y     Y    L   +     A  YF    +++P +  +  +L     + 
Sbjct: 177 AFVKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFATVVKNYPKSPKSPDALYKVGVIM 236

Query: 105 YSAGKYQQAASLGEEYITQYPES 127
              G   +A ++ ++    YP S
Sbjct: 237 QEKGDTAKAKAVYQQVSKLYPNS 259



 Score = 40.9 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 22/58 (37%)

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
           AI  FQ  +  Y D+ +   A   L +        D+A    + + + YP+   +   
Sbjct: 171 AISAFQAFVKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFATVVKNYPKSPKSPDA 228


>gi|330502227|ref|YP_004379096.1| TPR repeat-containing protein [Pseudomonas mendocina NK-01]
 gi|328916513|gb|AEB57344.1| TPR repeat-containing protein [Pseudomonas mendocina NK-01]
          Length = 209

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 22/136 (16%), Positives = 44/136 (32%), Gaps = 8/136 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D   ++  Y+ A   +K ++F KA + F      +P +  A  +      V  + G 
Sbjct: 82  EPGDPAKEKLYYDAAFDLIKAKDFDKASQAFAAFLNRYPNSQYAGNAQYWLGEVNLAKGD 141

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            Q A     +    YP    V    + +         DV             + +++ +Y
Sbjct: 142 LQAAGQAFAKVSQAYPSHAKVPDSLFKLA--------DVERRLGHNDKARGILQQVIAQY 193

Query: 170 TNSPYVKGARFYVTVG 185
             S   + A+  +   
Sbjct: 194 PGSSAAQLAQRDLQRL 209



 Score = 54.0 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 46/119 (38%), Gaps = 14/119 (11%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           +      Q  +  + RY NS Y   A++++      LA  +++            AA   
Sbjct: 103 KDFDKASQAFAAFLNRYPNSQYAGNAQYWLGEVN--LAKGDLQ------------AAGQA 148

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           F  V   Y       +++ +L +    L   D+AR ++  +  +YP    A+  +  ++
Sbjct: 149 FAKVSQAYPSHAKVPDSLFKLADVERRLGHNDKARGILQQVIAQYPGSSAAQLAQRDLQ 207


>gi|15644443|ref|NP_229495.1| hypothetical protein TM1695 [Thermotoga maritima MSB8]
 gi|4982272|gb|AAD36762.1|AE001810_1 conserved hypothetical protein [Thermotoga maritima MSB8]
          Length = 357

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 83/232 (35%), Gaps = 27/232 (11%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           LD   +     E+  K  L +++    +  ++ ++     P      ++        Y+ 
Sbjct: 124 LDIDENYAPAYEL--KGSLLVEQGKIEEGIKFLDKAVEIDP---WLVQAYASLGEAYYNL 178

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD----------VPYDQRATKL 157
           G Y++A    E  +   P  K     Y+++  +Y +M R           +  D      
Sbjct: 179 GDYEKAIHYWERELEYNPNDKIT---YFMITEAYYEMNRKDLAVKTLERLLEIDPDNI-P 234

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLV 216
            L  +S++     N    +     +   + +    E+E   R  LK G Y       + +
Sbjct: 235 ALYQLSQLYRELGNEEKAREMEEKIMNCKPK-YPTELEPWARVMLKHGRYKEVAEELEKI 293

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           + +   +     A   LV  YV L  +D+ARE++  I +     +W  Y + 
Sbjct: 294 VES---SPLNTLARLLLVVPYVKLGQIDKAREILDDIGQ---SNFWYYYGKK 339


>gi|319638157|ref|ZP_07992920.1| periplasmic protein [Neisseria mucosa C102]
 gi|317400430|gb|EFV81088.1| periplasmic protein [Neisseria mucosa C102]
          Length = 251

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 50/134 (37%), Gaps = 13/134 (9%)

Query: 48  LDSVTDVRYQREV--YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
           + S TD   Q E+  Y +A  + +  NFS A     +       + +AR+++ +    Q 
Sbjct: 121 VPSETDSAAQNELRLYNQAQKYYQRNNFSAAVAILKEADGGN-GSEIARRNMYLLLQSQQ 179

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSR 164
             G  +    +G  Y  ++  S       Y +G    +   +D+               +
Sbjct: 180 RLGNCESVIEIGNRYANRFRNSPQAPDAMYSIGQCQYKLQQKDIAR---------STWRK 230

Query: 165 IVERYTNSPYVKGA 178
           +++ + NS   K A
Sbjct: 231 LMQSFPNSEAAKRA 244



 Score = 39.7 bits (92), Expect = 0.47,   Method: Composition-based stats.
 Identities = 19/150 (12%), Positives = 42/150 (28%), Gaps = 48/150 (32%)

Query: 170 TNSPYVKGARFYVTVG---------RNQLAAKEVEI---GRYYLKRGEYVAA-------- 209
             +  +   +  +             +  A  E+ +    + Y +R  + AA        
Sbjct: 100 PKAQRLDDRKLKMNYLANGGGVPSETDSAAQNELRLYNQAQKYYQRNNFSAAVAILKEAD 159

Query: 210 ------IPR---------------FQLVLA-------NYSDAEHAEEAMARLVEAYVALA 241
                 I R                + V+         + ++  A +AM  + +    L 
Sbjct: 160 GGNGSEIARRNMYLLLQSQQRLGNCESVIEIGNRYANRFRNSPQAPDAMYSIGQCQYKLQ 219

Query: 242 LMDEAREVVSLIQERYPQGYWARYVETLVK 271
             D AR     + + +P    A+     +K
Sbjct: 220 QKDIARSTWRKLMQSFPNSEAAKRAAISLK 249


>gi|315287178|gb|EFU46590.1| tol-pal system protein YbgF [Escherichia coli MS 110-3]
          Length = 233

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 46/126 (36%), Gaps = 9/126 (7%)

Query: 61  YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A+  +++++    A   F    +++P +     +      + Y+ GK   AA     
Sbjct: 116 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 175

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       + VG+        +  D+  T        +++ +Y  +   K A+
Sbjct: 176 VVKNYPKSPKAADAMFKVGV--------IMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQ 227

Query: 180 FYVTVG 185
             +   
Sbjct: 228 KRLNAM 233



 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      ++ Y +S Y+  A +++              G
Sbjct: 112 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWL--------------G 157

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           +    +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 158 QLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 217

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 218 PGTDGAKQAQK 228



 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I  YP+S  +    Y +G       +              Y + +V+ Y 
Sbjct: 130 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 181

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A F V V                  +G+   A   +Q V++ Y   + A++A 
Sbjct: 182 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 227

Query: 231 ARL 233
            RL
Sbjct: 228 KRL 230


>gi|225848002|ref|YP_002728165.1| tetratricopeptide repeat domain protein [Sulfurihydrogenibium
           azorense Az-Fu1]
 gi|225644404|gb|ACN99454.1| tetratricopeptide repeat domain protein [Sulfurihydrogenibium
           azorense Az-Fu1]
          Length = 921

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 84/213 (39%), Gaps = 26/213 (12%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG-VARKSL 97
             +S          D   ++ +Y  A L+  E NF +A + F      F       +K+L
Sbjct: 532 SARSKLKEIAQQYNDELAKKAMYLYAYLYFSEGNFQQAIKEFENFRNTFKEDDVYNQKAL 591

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
           L  A   Y+ G+   A S+ +E+I +Y + K      Y        ++     +Q   K 
Sbjct: 592 LRIADSYYNLGEKDLARSIYKEFIEKYKDRKEAVDAAY-----NLVLLETKGENQEKDK- 645

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
               +   + +Y + P             N L   ++++   Y ++GE   AI  +Q + 
Sbjct: 646 ---IIEDFISKYPDYP-----------LVNTL---KLQLASIYEEKGEIEKAIKIYQQL- 687

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
            + S+ + +  A  +L E Y      D+A+E++
Sbjct: 688 -SNSNDKDSLLAKYKLAEIYEKSGQNDKAKEIL 719



 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 62/191 (32%), Gaps = 39/191 (20%)

Query: 99  MSAFVQ-----YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
             A+       +    Y    +  + +    P         Y+  +S          D +
Sbjct: 462 DLAYNYLGWYFFKNKDY---LNAYKSFKD--P---------YMKAVSLFNYG-----DVQ 502

Query: 154 ATKLMLQYMSRIVERYTNSPYVK-------GARFYVTVG----RNQLAAKEVEI-GRYYL 201
             K ++   +     +  S Y+         AR  +        ++LA K + +    Y 
Sbjct: 503 KAKELINGRNDRKSLF-LSAYIDIKQGDLESARSKLKEIAQQYNDELAKKAMYLYAYLYF 561

Query: 202 KRGEYVAAIPRFQLVLANYS-DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
             G +  AI  F+     +  D  + ++A+ R+ ++Y  L   D AR +     E+Y   
Sbjct: 562 SEGNFQQAIKEFENFRNTFKEDDVYNQKALLRIADSYYNLGEKDLARSIYKEFIEKYKDR 621

Query: 261 YWARY-VETLV 270
             A      LV
Sbjct: 622 KEAVDAAYNLV 632



 Score = 35.5 bits (81), Expect = 9.0,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 20/40 (50%)

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
            +  G +  A    ++++ +Y + K + Y YYL+G    +
Sbjct: 102 YFQRGDFIFAQENLKKFVEKYKDHKYLFYAYYLLGYINFE 141


>gi|213422409|ref|ZP_03355475.1| hypothetical protein Salmonentericaenterica_33610 [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
          Length = 124

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 45/126 (35%), Gaps = 9/126 (7%)

Query: 61  YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A+  +++++    A   F    + +P +     +      + Y+ GK   AA     
Sbjct: 7   YNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFAS 66

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       Y VG+        +  D+  T        +++ +Y  +   K A+
Sbjct: 67  VVKNYPKSPKAADAMYKVGV--------IMQDKGDTAKAKAVYQQVINKYPGTDGAKQAQ 118

Query: 180 FYVTVG 185
             +   
Sbjct: 119 KRLNAM 124



 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      +++Y +S Y   A +++               
Sbjct: 3   ANTDYNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLN----------- 51

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
                +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 52  ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVINKY 108

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 109 PGTDGAKQAQK 119



 Score = 43.6 bits (102), Expect = 0.033,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I +YP+S       Y +G       +              Y + +V+ Y 
Sbjct: 21  DDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 72

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A + V V                  +G+   A   +Q V+  Y   + A++A 
Sbjct: 73  KSPKAADAMYKVGVIMQ--------------DKGDTAKAKAVYQQVINKYPGTDGAKQAQ 118

Query: 231 ARL 233
            RL
Sbjct: 119 KRL 121


>gi|220907546|ref|YP_002482857.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC
           7425]
 gi|219864157|gb|ACL44496.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425]
          Length = 373

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 72/211 (34%), Gaps = 30/211 (14%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
            +T+  S A+  L      +        ++      E + +A      +++  A    +Q
Sbjct: 17  VMTMIQSQAMAALPIVPTNAMTSNQPVLISKQISAEEFFGQAKAKYAREDYQGAIAAVDQ 76

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
             R  P    A  + LM   +Q   G YQ+A +  ++ I   P + +    Y++ G    
Sbjct: 77  AIRLNP--NYAE-AYLMRGSIQTELGNYQEAIADLDQGIKLNPNNAS---AYFIRG---- 126

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY--- 199
                +  +    +  L   ++++  Y N       R  + +  + L      I  +   
Sbjct: 127 ----SIQLESGNLQGALADYNQVIRLYPNEANAYFIRGAIQLQLDNLQG---AIADFNRG 179

Query: 200 ----------YLKRGEYVAAIPRFQLVLANY 220
                     Y  RG   A +  +Q  +A++
Sbjct: 180 IKLNPNEAKAYFIRGTIQAGLGNYQEAIADF 210


>gi|218961725|ref|YP_001741500.1| hypothetical protein; putative signal peptide [Candidatus
           Cloacamonas acidaminovorans]
 gi|167730382|emb|CAO81294.1| hypothetical protein; putative signal peptide [Candidatus
           Cloacamonas acidaminovorans]
          Length = 552

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 22/145 (15%), Positives = 45/145 (31%), Gaps = 16/145 (11%)

Query: 61  YEKAVLFL-----KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           Y +A   L         F +A  Y       +P   +        A     A +   A +
Sbjct: 309 YIEAKTRLAFLLYDHNRFEEAIPYLEAIFDKYPENEL---VSTRLANAYQKANRLDDAIA 365

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT----KLMLQYMSRIVERYTN 171
             E  I   P++       YL  ++  ++      D  A     K  +  ++ ++    N
Sbjct: 366 KYENTIKNNPQNTMA----YLSAVNLYRLKATQTSDPAAVAAINKNAIDILNALITNQPN 421

Query: 172 SPYVKGARFYVTVGRNQLAAKEVEI 196
           +         + + +N+L   E+  
Sbjct: 422 NAIAYMNMAAIYLSQNKLQEAELYA 446



 Score = 35.9 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 66/235 (28%), Gaps = 46/235 (19%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            ++Y  A+      N+++A +         P     + +      V Y  GK +QA    
Sbjct: 176 NKIYNIALNNYANGNYAEAEKNLVFALGLNP---DLKDAYYYLGSVYYKQGKLEQAIQNL 232

Query: 118 EEYITQYPESKN-----VD-Y-----------VYYLVGMSYAQ-----MIRDVPYDQRAT 155
           E  + + P+        +D Y               +            I ++  +Q   
Sbjct: 233 ELNLEKNPQHTQTLAILIDIYEKTNQTNKRLNAMEKLATINENEELWLTIANLYSEQNNI 292

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
               + + + +E   N      A+  +                       +  AIP  + 
Sbjct: 293 AKAEEALQKALELNPN---YIEAKTRLAFLL--------------YDHNRFEEAIPYLEA 335

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQERYPQGYWARYVETL 269
           +   Y + E       RL  AY     +D+A  +  + I+              L
Sbjct: 336 IFDKYPENELVS---TRLANAYQKANRLDDAIAKYENTIKNNPQNTMAYLSAVNL 387


>gi|159185872|ref|NP_356908.2| hypothetical protein Atu3712 [Agrobacterium tumefaciens str. C58]
 gi|159141006|gb|AAK89693.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 329

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 51/144 (35%), Gaps = 14/144 (9%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
           +           +R     +   +  + ++Y+ A   +   ++  A + F Q  + +P  
Sbjct: 179 SGSLPGVTTGNGTRKTDPVNTAALTSEGDIYQAAYGHVLSGDYKLAEQGFQQYLQGYPKG 238

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE---SKNVDYVYYLVGMSYAQMIRD 147
             A  +       QYS GK+ +A    + ++  +     S     +   +GMS A +   
Sbjct: 239 TKAADASFWLGEAQYSQGKFNEA---AKTFLNGHQTYGKSPKAPEMLMKLGMSLAALDN- 294

Query: 148 VPYDQRATKLMLQYMSRIVERYTN 171
                  T+     +  + +RY N
Sbjct: 295 -------TETACATLREVPKRYPN 311



 Score = 42.8 bits (100), Expect = 0.046,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 36/109 (33%), Gaps = 14/109 (12%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              KL  Q   + ++ Y        A F++   +                +G++  A   
Sbjct: 219 GDYKLAEQGFQQYLQGYPKGTKAADASFWLGEAQ--------------YSQGKFNEAAKT 264

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           F      Y  +  A E + +L  +  AL   + A   +  + +RYP   
Sbjct: 265 FLNGHQTYGKSPKAPEMLMKLGMSLAALDNTETACATLREVPKRYPNAS 313


>gi|327481489|gb|AEA84799.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
          Length = 270

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 46/130 (35%), Gaps = 8/130 (6%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D   ++  Y+ A   +K ++F KA + F    R +P +  A  +      V  + G  Q 
Sbjct: 147 DPAQEKLYYDAAFDLIKAKDFDKASQAFAAFLRKYPESQYAGNAQYWLGEVNLAKGDLQG 206

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A          YP+   V    Y +         DV             + +++ +Y N+
Sbjct: 207 AGQAFARVSQAYPQHSKVPDSLYKLA--------DVEIRMGNRDKAQGILRQVIAQYPNT 258

Query: 173 PYVKGARFYV 182
              + A+  +
Sbjct: 259 SAAQLAQRQL 268



 Score = 51.7 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 40/109 (36%), Gaps = 14/109 (12%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           +      Q  +  + +Y  S Y   A++++      LA  +++             A   
Sbjct: 165 KDFDKASQAFAAFLRKYPESQYAGNAQYWLGEVN--LAKGDLQ------------GAGQA 210

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           F  V   Y       +++ +L +  + +   D+A+ ++  +  +YP   
Sbjct: 211 FARVSQAYPQHSKVPDSLYKLADVEIRMGNRDKAQGILRQVIAQYPNTS 259


>gi|291526081|emb|CBK91668.1| Tetratricopeptide repeat [Eubacterium rectale DSM 17629]
          Length = 320

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 47/244 (19%), Positives = 77/244 (31%), Gaps = 36/244 (14%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
            ALT+   +    L G           D   D    R+     +  ++  ++  A + F 
Sbjct: 7   MALTLTVVLTAGMLTGCGSG-------DKAKDKDAYRQY---GINCIENGSYDDAVDAFQ 56

Query: 82  QCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           +       +  A    L   +     QY +G    A       I     +K+ D  YYL 
Sbjct: 57  KALDQSVGSVGAE--ELDICYYKAKAQYLSGDVDGAIDTYTAIID---YNKDSD-AYYLR 110

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERY-----TNSPYV--KGARFYVT---VGRN 187
           G  Y     D     +  K  L       E Y     T S Y      + Y+      + 
Sbjct: 111 GCIYFAK-NDSDKGLKDFKTALSENDDNYELYLGVYETLSKYGMNDQGKEYLDNALKLKA 169

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
           + A   ++ GR Y   G+Y +AI   Q  +      E   +A   + E Y      D ++
Sbjct: 170 KTADDYMQRGRIYTMLGDYDSAIKSLQKAID-----EKLVKANYYMGEVYQKKGDNDSSQ 224

Query: 248 EVVS 251
           +   
Sbjct: 225 KYFK 228



 Score = 41.3 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 25/76 (32%), Gaps = 7/76 (9%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           ++       +   N+  A  YF    +           ++           +G +  A S
Sbjct: 240 DLMNMGQAQMDNGNYDTAITYFQNALELESV----PNKQQITKAMIIAYEYSGDFATAKS 295

Query: 116 LGEEYITQYPESKNVD 131
             EEY+  YP+ ++  
Sbjct: 296 KMEEYMKDYPDDEDAA 311


>gi|226330925|ref|ZP_03806443.1| hypothetical protein PROPEN_04848 [Proteus penneri ATCC 35198]
 gi|225201720|gb|EEG84074.1| hypothetical protein PROPEN_04848 [Proteus penneri ATCC 35198]
          Length = 110

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 45/115 (39%), Gaps = 8/115 (6%)

Query: 68  LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
           +  +++ KA    N    ++P +     +      + Y  G   QAAS     +  YP+S
Sbjct: 1   MNSKDYDKAIVELNNFINNYPKSSYQSNAQFWLGQMYYLKGNKDQAASTFAIVVKNYPKS 60

Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
           +     +Y +G+        +  ++           +++++Y NS   K A+  +
Sbjct: 61  QKASEAFYKIGL--------IMQEKGQKDNAKAVYQQVIKQYPNSAGAKLAQKQL 107



 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 45/116 (38%), Gaps = 14/116 (12%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           +     +  ++  +  Y  S Y   A+F++                YYLK  +  AA   
Sbjct: 4   KDYDKAIVELNNFINNYPKSSYQSNAQFWLGQM-------------YYLKGNKDQAAST- 49

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           F +V+ NY  ++ A EA  ++          D A+ V   + ++YP    A+  + 
Sbjct: 50  FAIVVKNYPKSQKASEAFYKIGLIMQEKGQKDNAKAVYQQVIKQYPNSAGAKLAQK 105



 Score = 38.9 bits (90), Expect = 0.73,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 24/61 (39%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           +   +Y  AI      + NY  + +   A   L + Y      D+A    +++ + YP+ 
Sbjct: 1   MNSKDYDKAIVELNNFINNYPKSSYQSNAQFWLGQMYYLKGNKDQAASTFAIVVKNYPKS 60

Query: 261 Y 261
            
Sbjct: 61  Q 61


>gi|239832780|ref|ZP_04681109.1| tol-pal system protein YbgF [Ochrobactrum intermedium LMG 3301]
 gi|239825047|gb|EEQ96615.1| tol-pal system protein YbgF [Ochrobactrum intermedium LMG 3301]
          Length = 550

 Score = 55.5 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 49/124 (39%), Gaps = 8/124 (6%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           + S+        +Y+ +  +L   ++  A   F +  + +P      ++        Y  
Sbjct: 417 VASLPTDDNPSSLYQASYQYLMSGDYKAAETGFREHVKRYPADPSTAEARFWLGESLYGQ 476

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           G+Y +AA++  +    YP+SK      + +GM+  +M      D     +     ++I E
Sbjct: 477 GRYSEAATVFIDTQRDYPDSKRAPENMFKLGMTLEKMDN---RD-----VACATFAQIPE 528

Query: 168 RYTN 171
           RY  
Sbjct: 529 RYPK 532



 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 28/79 (35%), Gaps = 3/79 (3%)

Query: 194 VEIGRY-YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           +    Y YL  G+Y AA   F+  +  Y       EA   L E+        EA  V   
Sbjct: 429 LYQASYQYLMSGDYKAAETGFREHVKRYPADPSTAEARFWLGESLYGQGRYSEAATVFID 488

Query: 253 IQERYPQGYWARYVETLVK 271
            Q  YP     R  E + K
Sbjct: 489 TQRDYPDSK--RAPENMFK 505



 Score = 38.9 bits (90), Expect = 0.81,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 36/107 (33%), Gaps = 14/107 (13%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         V+RY   P    ARF++                    +G Y  A   
Sbjct: 440 GDYKAAETGFREHVKRYPADPSTAEARFWLGESL--------------YGQGRYSEAATV 485

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           F     +Y D++ A E M +L      +   D A    + I ERYP+
Sbjct: 486 FIDTQRDYPDSKRAPENMFKLGMTLEKMDNRDVACATFAQIPERYPK 532



 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 31/98 (31%), Gaps = 8/98 (8%)

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           +    +G Y+ A +   E++ +YP   +     + +G S     R               
Sbjct: 434 YQYLMSGDYKAAETGFREHVKRYPADPSTAEARFWLGESLYGQGRYS--------EAATV 485

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
                  Y +S       F + +   ++  ++V    +
Sbjct: 486 FIDTQRDYPDSKRAPENMFKLGMTLEKMDNRDVACATF 523


>gi|324020374|gb|EGB89593.1| tol-pal system protein YbgF [Escherichia coli MS 117-3]
          Length = 244

 Score = 55.5 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 49/156 (31%), Gaps = 9/156 (5%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89
           +           +      +          Y  A+  +++++    A   F    +++P 
Sbjct: 97  SGAAASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPD 156

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +     +      + Y+ GK   AA      +  YP+S       + VG+        + 
Sbjct: 157 STYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGV--------IM 208

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            D+  T        +++ +Y  +   K A+  +   
Sbjct: 209 QDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM 244



 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      ++ Y +S Y+  A +++               
Sbjct: 123 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLN----------- 171

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
                +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 172 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 228

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 229 PGTDGAKQAQK 239



 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I  YP+S  +    Y +G       +              Y + +V+ Y 
Sbjct: 141 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 192

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A F V V                  +G+   A   +Q V++ Y   + A++A 
Sbjct: 193 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 238

Query: 231 ARL 233
            RL
Sbjct: 239 KRL 241


>gi|197118979|ref|YP_002139406.1| lytic transglycosylase domain-containing protein [Geobacter
           bemidjiensis Bem]
 gi|197088339|gb|ACH39610.1| lytic transglycosylase domain protein [Geobacter bemidjiensis Bem]
          Length = 709

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 51/142 (35%), Gaps = 22/142 (15%)

Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
            DY  Y  G+S A++ R   +DQ      L  + R+++ Y  S  V+ A   + +  + L
Sbjct: 92  ADYALYYQGLSLAKLER---HDQ-----ALTPLYRLLKHYPESRLVRAA---LILYADTL 140

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           AA            G Y  A   +   +  Y     +  A+         L     A +V
Sbjct: 141 AA-----------AGHYNEAQQSYATFVERYPSGSDSISALYGSALCKEKLGDPIAAAKV 189

Query: 250 VSLIQERYPQGYWARYVETLVK 271
           +  I   YP   ++      ++
Sbjct: 190 LRGIYLNYPASSFSDKSARDLQ 211



 Score = 39.3 bits (91), Expect = 0.54,   Method: Composition-based stats.
 Identities = 22/165 (13%), Positives = 56/165 (33%), Gaps = 8/165 (4%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           K   +    +A   L  WE  +++         +     +Y + +   K +   +A    
Sbjct: 57  KGVRSFMVGMAAARLEQWEEAAAQLPAAAEGYPILADYALYYQGLSLAKLERHDQALTPL 116

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
            +  + +P + + R +L++ A    +AG Y +A      ++ +YP   +     Y   + 
Sbjct: 117 YRLLKHYPESRLVRAALILYADTLAAAGHYNEAQQSYATFVERYPSGSDSISALYGSALC 176

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
             ++   +           + +  I   Y  S +   +   +   
Sbjct: 177 KEKLGDPI--------AAAKVLRGIYLNYPASSFSDKSARDLQRL 213


>gi|85058866|ref|YP_454568.1| hypothetical protein SG0888 [Sodalis glossinidius str. 'morsitans']
 gi|84779386|dbj|BAE74163.1| conserved hypothetical protein [Sodalis glossinidius str.
           'morsitans']
          Length = 246

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 45/126 (35%), Gaps = 9/126 (7%)

Query: 61  YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y +AV   L+++ + +A   F    + +P +     +      + Y+ G+   AA     
Sbjct: 129 YNEAVALVLEKKQYDQAISAFQSFVKRYPDSTYQPNANYWLGQLNYNQGEKDDAAYYFAL 188

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S         VG+        +  ++           ++ + Y ++   K A+
Sbjct: 189 VVKNYPKSPKASDALLKVGV--------IMQEKGQKDKARAVYQQVGKLYPSAEAAKQAQ 240

Query: 180 FYVTVG 185
             +   
Sbjct: 241 KRLAGL 246



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 41/112 (36%), Gaps = 14/112 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             +      V+RY +S Y   A +++         K+     YY            F LV
Sbjct: 144 QAISAFQSFVKRYPDSTYQPNANYWLGQLNYNQGEKDD--AAYY------------FALV 189

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           + NY  +  A +A+ ++          D+AR V   + + YP    A+  + 
Sbjct: 190 VKNYPKSPKASDALLKVGVIMQEKGQKDKARAVYQQVGKLYPSAEAAKQAQK 241



 Score = 49.0 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 43/127 (33%), Gaps = 22/127 (17%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +Y QA S  + ++ +YP+S       Y +G             Q        Y + +V+
Sbjct: 140 KQYDQAISAFQSFVKRYPDSTYQPNANYWLGQLNYN--------QGEKDDAAYYFALVVK 191

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y  SP    A   V V   +   K+     Y              Q V   Y  AE A+
Sbjct: 192 NYPKSPKASDALLKVGVIMQEKGQKDKARAVY--------------QQVGKLYPSAEAAK 237

Query: 228 EAMARLV 234
           +A  RL 
Sbjct: 238 QAQKRLA 244



 Score = 44.3 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 28/66 (42%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           L++ +Y  AI  FQ  +  Y D+ +   A   L +        D+A    +L+ + YP+ 
Sbjct: 137 LEKKQYDQAISAFQSFVKRYPDSTYQPNANYWLGQLNYNQGEKDDAAYYFALVVKNYPKS 196

Query: 261 YWARYV 266
             A   
Sbjct: 197 PKASDA 202


>gi|206576794|ref|YP_002239636.1| tol-pal system protein YbgF [Klebsiella pneumoniae 342]
 gi|288936477|ref|YP_003440536.1| tol-pal system protein YbgF [Klebsiella variicola At-22]
 gi|290510466|ref|ZP_06549836.1| hypothetical protein HMPREF0485_02236 [Klebsiella sp. 1_1_55]
 gi|206565852|gb|ACI07628.1| tol-pal system protein YbgF [Klebsiella pneumoniae 342]
 gi|288891186|gb|ADC59504.1| tol-pal system protein YbgF [Klebsiella variicola At-22]
 gi|289777182|gb|EFD85180.1| hypothetical protein HMPREF0485_02236 [Klebsiella sp. 1_1_55]
          Length = 266

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 41/126 (32%), Gaps = 9/126 (7%)

Query: 61  YEKAVLFL-KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A+  +        A   F    + +P +     +      + Y+ GK   AA     
Sbjct: 148 YNAAIALVKDASRQDDAMVAFQNFVKKYPDSTYQPNANYWLGQLNYNKGKKDDAAFYFAS 207

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       + VG+        +  D+  T        +++ ++  +   K A+
Sbjct: 208 VVKNYPKSPKAPDAMFKVGV--------IMQDKGDTAKAKAVYQQVISKFPGTDGAKQAQ 259

Query: 180 FYVTVG 185
             +   
Sbjct: 260 KRLNAL 265



 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 43/131 (32%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D       +      V++Y +S Y   A +++               
Sbjct: 144 ANTDYNAAIALVKDASRQDDAMVAFQNFVKKYPDSTYQPNANYWLGQLN----------- 192

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
             Y K  +  AA   F  V+ NY  +  A +AM ++           +A+ V   +  ++
Sbjct: 193 --YNKGKKDDAAFY-FASVVKNYPKSPKAPDAMFKVGVIMQDKGDTAKAKAVYQQVISKF 249

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 250 PGTDGAKQAQK 260


>gi|313672749|ref|YP_004050860.1| tol-pal system protein ybgf [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312939505|gb|ADR18697.1| tol-pal system protein YbgF [Calditerrivibrio nitroreducens DSM
           19672]
          Length = 254

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 53/148 (35%), Gaps = 11/148 (7%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
             +  S++    D++ D      +Y  A+   K   + ++ + F   +  FP   +A  S
Sbjct: 112 SSQSDSNKVYIEDNIADKAT---LYNLAMELYKSGRYEESIDKFRSFTVRFPSDSLADNS 168

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
           L        +    ++AA      I  YP+   V    Y +G++  ++ +          
Sbjct: 169 LYWMGESYLNLNNLEKAAESFRNVIENYPQENKVPDAMYKLGVTLDKLGKR--------N 220

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTV 184
             +  + +++  +  S     A+  +  
Sbjct: 221 EAVDILKKLILNFKYSDIANTAKSKLIE 248



 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 34/107 (31%), Gaps = 16/107 (14%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE-IGRYYLKRGEYVAAIPRFQ 214
           +  +        R+ +               + LA   +  +G  YL       A   F+
Sbjct: 146 EESIDKFRSFTVRFPS---------------DSLADNSLYWMGESYLNLNNLEKAAESFR 190

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            V+ NY       +AM +L      L   +EA +++  +   +    
Sbjct: 191 NVIENYPQENKVPDAMYKLGVTLDKLGKRNEAVDILKKLILNFKYSD 237



 Score = 41.3 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 39/107 (36%), Gaps = 21/107 (19%)

Query: 170 TNS--PYVKGARFYV---------TVGRNQLAAKEVEIGRYY------LKRGEYVAAIPR 212
             S    V+  +  +             + +A K       Y       K G Y  +I +
Sbjct: 96  PQSKAQKVEQVQQKIQSSQSDSNKVYIEDNIADK----ATLYNLAMELYKSGRYEESIDK 151

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           F+     +     A+ ++  + E+Y+ L  +++A E    + E YPQ
Sbjct: 152 FRSFTVRFPSDSLADNSLYWMGESYLNLNNLEKAAESFRNVIENYPQ 198


>gi|56460186|ref|YP_155467.1| TPR repeat-containing protein [Idiomarina loihiensis L2TR]
 gi|56179196|gb|AAV81918.1| Uncharacterized conserved protein, contains TPR repeats [Idiomarina
           loihiensis L2TR]
          Length = 253

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 52/138 (37%), Gaps = 9/138 (6%)

Query: 46  VYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
               S +    + + Y+KA+   L+++ + +A   F    ++FP +  +  +      + 
Sbjct: 122 TDNSSYSPNLSENDAYDKAIALVLEDKRYDEAIPAFESFLKNFPNSTYSPNAHYWLGQLF 181

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           ++  +Y QA    E  +  YP+S         +G   ++  +              Y  +
Sbjct: 182 FAKRQYDQAKQQFETVVNDYPDSNKRGDCLLKLGAIASEQDKSAD--------AKAYYQQ 233

Query: 165 IVERYTNSPYVKGARFYV 182
           ++E Y  S     A+  +
Sbjct: 234 VIEEYPESTEANLAKQRL 251



 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 42/128 (32%), Gaps = 22/128 (17%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
              +Y +A    E ++  +P S      +Y +G  +    +   YDQ       Q    +
Sbjct: 146 EDKRYDEAIPAFESFLKNFPNSTYSPNAHYWLGQLFFAKRQ---YDQ-----AKQQFETV 197

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           V  Y +S         +    +              ++ +   A   +Q V+  Y ++  
Sbjct: 198 VNDYPDSNKRGDCLLKLGAIAS--------------EQDKSADAKAYYQQVIEEYPESTE 243

Query: 226 AEEAMARL 233
           A  A  RL
Sbjct: 244 ANLAKQRL 251



 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 39/104 (37%), Gaps = 14/104 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             +      ++ + NS Y   A +++                ++ KR +Y  A  +F+ V
Sbjct: 152 EAIPAFESFLKNFPNSTYSPNAHYWLGQL-------------FFAKR-QYDQAKQQFETV 197

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           + +Y D+    + + +L           +A+     + E YP+ 
Sbjct: 198 VNDYPDSNKRGDCLLKLGAIASEQDKSADAKAYYQQVIEEYPES 241



 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 43/135 (31%), Gaps = 21/135 (15%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK-----GARFYVTVGRNQLAAKEVEI 196
              ++               + ++  +  NS Y        A                  
Sbjct: 95  FSNLKSSNNQSETAGNDYNSLEQVPTQTDNSSYSPNLSENDAYDKAIALV---------- 144

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
               L+   Y  AIP F+  L N+ ++ ++  A   L + + A    D+A++    +   
Sbjct: 145 ----LEDKRYDEAIPAFESFLKNFPNSTYSPNAHYWLGQLFFAKRQYDQAKQQFETVVND 200

Query: 257 YPQGYWARYVETLVK 271
           YP     +  + L+K
Sbjct: 201 YPDSN--KRGDCLLK 213


>gi|17158736|ref|NP_478247.1| hypothetical protein all7600 [Nostoc sp. PCC 7120]
 gi|17134685|dbj|BAB77243.1| all7600 [Nostoc sp. PCC 7120]
          Length = 225

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 58/181 (32%), Gaps = 21/181 (11%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           K+       + +  L+G    +               +E Y + V  L++ NF+ A   F
Sbjct: 2   KYIKRTVAILGITSLLGVMPAAVSAREAQIPLKATNFQEYYNQGVQKLEQGNFNGAIADF 61

Query: 81  NQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
           N   +  P  + G   + L  S         +  A S     +   P+  +    Y   G
Sbjct: 62  NSVVQMNPRFYEGFCLRGLAKS-----QLRDFSAAISDFNLALRLNPKHTD---AYNGRG 113

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           +SY ++           +  +   ++ V+   NS       + + +   +    +  I  
Sbjct: 114 ISYVEL--------GDFQKAIADFNQTVKIDPNSQ---DGYYNLGLAHFRQGNHQQAIAD 162

Query: 199 Y 199
           +
Sbjct: 163 F 163



 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 40/107 (37%), Gaps = 14/107 (13%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           + + +++  +F KA   FNQ  +  P +   +          +  G +QQA +   + + 
Sbjct: 112 RGISYVELGDFQKAIADFNQTVKIDPNS---QDGYYNLGLAHFRQGNHQQAIADFNKALQ 168

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
             P   N+   Y   G++   +          +K  +  + +  + +
Sbjct: 169 INP---NLADAYGNRGLAQYAL--------GDSKSAVTDLQQAAKLF 204


>gi|293368722|ref|ZP_06615327.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CMC 3f]
 gi|292636187|gb|EFF54674.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CMC 3f]
          Length = 1005

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 72/218 (33%), Gaps = 36/218 (16%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK-------YQQA 113
           Y    +    +++++A  YF +    +        +    A      G        +++A
Sbjct: 513 YNLGYIAFHRKDYTQASNYFQK----YVQLEKGENAT-ALADAYNRIGDCHLHVRNFEEA 567

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
                +       S   DY +Y + +                   +  ++R+V +Y  SP
Sbjct: 568 KQYYSQAEQMNTSS--GDYSFYQLALVSGLQKDYTGK--------ITLLNRLVGKYPASP 617

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
           Y   A                E GR Y+       AI  F+ +L  Y ++  + +A A +
Sbjct: 618 YAVNAI--------------YEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEI 663

Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
              Y      ++A E    + E+YP    AR     +K
Sbjct: 664 GLLYYQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLK 701



 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 34/80 (42%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                    +YEK   ++   N ++A   F +    +P + V+RK+      + Y  G Y
Sbjct: 614 PASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEIGLLYYQKGDY 673

Query: 111 QQAASLGEEYITQYPESKNV 130
            QA    ++ I +YP S+  
Sbjct: 674 NQAIEAYKQVIEKYPGSEEA 693



 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 39/267 (14%), Positives = 75/267 (28%), Gaps = 55/267 (20%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
           +C  +            D  T       +Y++     +E+N++ A        +  P A 
Sbjct: 9   ICAAICCTPIIGFAQTGDKFTST---DNLYKEGKELFQEKNYAAALPALKAFVKQKPVAS 65

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA--------- 142
           + + +  M     Y      +   L  +Y+ +YP++   + +Y L+   Y          
Sbjct: 66  LLQDAEYMLVSSAYELKDKNR-IELLRKYLDRYPDTPYANRIYALLASCYFYEGKYDEAL 124

Query: 143 --------QMIRDVPYDQ------------RATKLMLQYMSRIVERYTNSPYVKGARFYV 182
                    ++ +   D                +    +   +        Y K   +Y+
Sbjct: 125 ALFNSADLDLLGNEERDDCTYQLATCYLKTDNLREAAIWFETLRANSP--KYAKDCDYYL 182

Query: 183 TVGRNQLAAKE--------------------VEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
           +  R                             I   Y +   Y  A    Q  L+ Y +
Sbjct: 183 SYIRYTQKRYSEALKGFLPLQDDSKYKALVPYYIAEIYTQLKNYDKAQIVAQNYLSAYPN 242

Query: 223 AEHAEEAMARLVEAYVALALMDEAREV 249
            EHA E    L +AY       +A E 
Sbjct: 243 NEHAAEMYRILGDAYYHFGQYHQAVEA 269



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 47/125 (37%), Gaps = 8/125 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A++   +++++      N+    +P +  A  ++              QA +  +E 
Sbjct: 587 YQLALVSGLQKDYTGKITLLNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKEL 646

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +T+YPES         +G+ Y Q               ++   +++E+Y  S   + A  
Sbjct: 647 LTKYPESPVSRKAAAEIGLLYYQK--------GDYNQAIEAYKQVIEKYPGSEEARLAMR 698

Query: 181 YVTVG 185
            +   
Sbjct: 699 DLKSI 703



 Score = 43.2 bits (101), Expect = 0.037,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 77/220 (35%), Gaps = 36/220 (16%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A ++ + +N+ KA          +P    A +   +     Y  G+Y QA      Y
Sbjct: 214 YYIAEIYTQLKNYDKAQIVAQNYLSAYPNNEHAAEMYRILGDAYYHFGQYHQAVEAFNNY 273

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           + +   +   D   Y++G+SY Q         +      + + ++     N    + A  
Sbjct: 274 LNKDRSAPRRD-ALYMLGLSYYQT--------KVYSKAAETLGKVTTD--NDALTQNAYL 322

Query: 181 YVTVGRNQLAAK---------------EVEI---GRYYL-------KRGEYVAAIPRFQL 215
           ++ +   QLA K                ++I     Y             +  ++  F+ 
Sbjct: 323 HMGLSYLQLAEKNKARMAFEQAAASNANMQIKEQAAYNYALCLHETSFSAFGESVTAFEK 382

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
            L  +  + +AE+  + LVE Y+     D A + +  I +
Sbjct: 383 FLNEFPTSPYAEKVSSYLVEVYMNTRSYDAALKSIDRIAK 422



 Score = 42.8 bits (100), Expect = 0.047,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 65/190 (34%), Gaps = 28/190 (14%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A  +LK  N  +A  +F     + P    A+      ++++Y+  +Y +A    + +
Sbjct: 145 YQLATCYLKTDNLREAAIWFETLRANSP--KYAKDCDYYLSYIRYTQKRYSEAL---KGF 199

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +    +SK    V Y +   Y Q+        +            +  Y N+ +      
Sbjct: 200 LPLQDDSKYKALVPYYIAEIYTQL--------KNYDKAQIVAQNYLSAYPNNEHAAEMYR 251

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
            +              G  Y   G+Y  A+  F   L     +    +A+  L  +Y   
Sbjct: 252 IL--------------GDAYYHFGQYHQAVEAFNNYLNK-DRSAPRRDALYMLGLSYYQT 296

Query: 241 ALMDEAREVV 250
            +  +A E +
Sbjct: 297 KVYSKAAETL 306



 Score = 35.9 bits (82), Expect = 6.1,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 50/167 (29%), Gaps = 22/167 (13%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           + YL+       +  +Y   + + + + +SKA E   + + D     + + + L      
Sbjct: 271 NNYLNKDRSAPRRDALYMLGLSYYQTKVYSKAAETLGKVTTDN--DALTQNAYLHMGLSY 328

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
               +  +A    E+        +  +   Y   +   +          A    +    +
Sbjct: 329 LQLAEKNKARMAFEQAAASNANMQIKEQAAYNYALCLHETSFS------AFGESVTAFEK 382

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
            +  +  SPY +    Y+                 Y+    Y AA+ 
Sbjct: 383 FLNEFPTSPYAEKVSSYLVEV--------------YMNTRSYDAALK 415


>gi|78224418|ref|YP_386165.1| hypothetical protein Gmet_3227 [Geobacter metallireducens GS-15]
 gi|78195673|gb|ABB33440.1| conserved hypothetical protein [Geobacter metallireducens GS-15]
          Length = 996

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 27/69 (39%), Gaps = 1/69 (1%)

Query: 194 VEIGRYY-LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           V I  +   ++ +Y  AI R + VL  Y D    + A+  L  A        +A   +S 
Sbjct: 39  VFIAGFNAYQKKDYQTAIERMKTVLEKYPDTPLRDMAIFWLARANFKAGFERDAARYMSQ 98

Query: 253 IQERYPQGY 261
             + YP   
Sbjct: 99  FMKEYPDSP 107



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 38/110 (34%), Gaps = 6/110 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +  F    F  +  C ++     +                +V+       +++++  A E
Sbjct: 4   MKYFRTAAFRCLTGCLIIASLLST------PVYAVNSDDSQVFIAGFNAYQKKDYQTAIE 57

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
                   +P   +   ++   A   + AG  + AA    +++ +YP+S 
Sbjct: 58  RMKTVLEKYPDTPLRDMAIFWLARANFKAGFERDAARYMSQFMKEYPDSP 107



 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 28/69 (40%), Gaps = 8/69 (11%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y    YQ A    +  + +YP++   D   + +  +  +       D        +YMS+
Sbjct: 47  YQKKDYQTAIERMKTVLEKYPDTPLRDMAIFWLARANFKA--GFERD------AARYMSQ 98

Query: 165 IVERYTNSP 173
            ++ Y +SP
Sbjct: 99  FMKEYPDSP 107


>gi|324010379|gb|EGB79598.1| tol-pal system protein YbgF [Escherichia coli MS 60-1]
          Length = 244

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 46/126 (36%), Gaps = 9/126 (7%)

Query: 61  YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A+  +++++    A   F    +++P +     +      + Y+ GK   AA     
Sbjct: 127 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 186

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       + VG+        +  D+  T        +++ +Y  +   K A+
Sbjct: 187 VVKNYPKSPKAADAMFKVGV--------IMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQ 238

Query: 180 FYVTVG 185
             +   
Sbjct: 239 KRLNAM 244



 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      ++ Y +S Y+  A +++               
Sbjct: 123 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLN----------- 171

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
                +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 172 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 228

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 229 PGTDGAKQAQK 239



 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I  YP+S  +    Y +G       +              Y + +V+ Y 
Sbjct: 141 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 192

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A F V V                  +G+   A   +Q V++ Y   + A++A 
Sbjct: 193 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 238

Query: 231 ARL 233
            RL
Sbjct: 239 KRL 241


>gi|218960841|ref|YP_001740616.1| hypothetical protein; putative signal peptide [Candidatus
           Cloacamonas acidaminovorans]
 gi|167729498|emb|CAO80409.1| hypothetical protein; putative signal peptide [Candidatus
           Cloacamonas acidaminovorans]
          Length = 834

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 55/171 (32%), Gaps = 30/171 (17%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +Y +A     + I+   + K V+  YYL+  S                        +V 
Sbjct: 51  DEYTKAIKKCGKIISTDKKGKRVEEAYYLMAKSLYYKGNS-------AFQAKDQFQNLVI 103

Query: 168 RYTNSPYVKGARFYV------------------TVGRNQLAAKE----VEI-GRYYLKRG 204
           R+ +S YV  A  Y+                     RN    K     + +   + +K  
Sbjct: 104 RFPDSKYVPEAYIYIAKILRETNQPKEAEKLLDEFLRNPKYRKHHPEALFVLADFAIKDK 163

Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           +++ A    + ++  +   +   EA     + Y      D++ E    +Q+
Sbjct: 164 DFIKAQHYLERIITEFPKTKEYREAYFLFGKNYYEQKDYDKSLEAFKKMQK 214



 Score = 51.3 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 83/251 (33%), Gaps = 42/251 (16%)

Query: 38  WERQSSRDVYLDSVTDVRY--QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
             +  S D     V +  Y   + +Y K     + ++       F      FP +    +
Sbjct: 60  CGKIISTDKKGKRVEEAYYLMAKSLYYKGNSAFQAKD------QFQNLVIRFPDSKYVPE 113

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPE-SKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           + +  A +     + ++A  L +E++   P+  K+     +++         D     + 
Sbjct: 114 AYIYIAKILRETNQPKEAEKLLDEFLR-NPKYRKHHPEALFVLA--------DFAIKDKD 164

Query: 155 TKLMLQYMSRIVERYTNSPYVKGA--------RFYVTVGRNQLAAKEVEIGR-------- 198
                 Y+ RI+  +  +   + A               ++  A K+++  R        
Sbjct: 165 FIKAQHYLERIITEFPKTKEYREAYFLFGKNYYEQKDYDKSLEAFKKMQKARGIDKTIKL 224

Query: 199 ---YY-----LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
              YY     L+ G+   A+   + ++ + S  +           A  AL    EAR  +
Sbjct: 225 EGTYYIGLNELELGQAEKALKTAKGLIKSESRPDKIPFVRLLKARAQFALGDTTEARTEI 284

Query: 251 SLIQERYPQGY 261
             I + YP+  
Sbjct: 285 EFITKNYPRTE 295


>gi|152969310|ref|YP_001334419.1| tol-pal system protein YbgF [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238893778|ref|YP_002918512.1| tol-pal system protein YbgF [Klebsiella pneumoniae NTUH-K2044]
 gi|262041198|ref|ZP_06014410.1| hypothetical protein HMPREF0484_1426 [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|329998742|ref|ZP_08303196.1| tol-pal system protein YbgF [Klebsiella sp. MS 92-3]
 gi|150954159|gb|ABR76189.1| putative periplasmic protein [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238546094|dbj|BAH62445.1| putative periplasmic protein [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|259041427|gb|EEW42486.1| hypothetical protein HMPREF0484_1426 [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|328538569|gb|EGF64673.1| tol-pal system protein YbgF [Klebsiella sp. MS 92-3]
          Length = 264

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/126 (14%), Positives = 41/126 (32%), Gaps = 9/126 (7%)

Query: 61  YEKAVLFL-KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A+  +        A   F    + +P +     +      + Y+ G+   AA     
Sbjct: 146 YNAAIALVKDASRQDDAMVAFQNFVKKYPDSTYQPNANYWLGQLNYNKGRKDDAAFYFAS 205

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       + VG+        +  D+  T        +++ ++  +   K A+
Sbjct: 206 VVKNYPKSPKAPDAMFKVGV--------IMQDKGDTAKAKAVYQQVINKFPGTDGAKQAQ 257

Query: 180 FYVTVG 185
             +   
Sbjct: 258 KRLNAL 263



 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 43/131 (32%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D       +      V++Y +S Y   A +++               
Sbjct: 142 ANTDYNAAIALVKDASRQDDAMVAFQNFVKKYPDSTYQPNANYWLGQLN----------- 190

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
             Y K  +  AA   F  V+ NY  +  A +AM ++           +A+ V   +  ++
Sbjct: 191 --YNKGRKDDAAFY-FASVVKNYPKSPKAPDAMFKVGVIMQDKGDTAKAKAVYQQVINKF 247

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 248 PGTDGAKQAQK 258


>gi|37520090|ref|NP_923467.1| transglycosylase [Gloeobacter violaceus PCC 7421]
 gi|35211082|dbj|BAC88462.1| gll0521 [Gloeobacter violaceus PCC 7421]
          Length = 667

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/264 (15%), Positives = 77/264 (29%), Gaps = 42/264 (15%)

Query: 17  YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQR--EVYEKAVLFLKEQNFS 74
           ++     L I  S+A    + W            +  +  Q     Y +        +++
Sbjct: 6   FRFKTRTLLIAASLAGALGLAWVAFPKPPTEDSPLVALSSQDRSGRYRRGSAAFVRGDYA 65

Query: 75  KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
           +A       +  +P   +A +  L  A           A+  G  ++  +P+S  V    
Sbjct: 66  EARRQLAGLAASYP--ALAERIGLKLAV----------ASGEGRRWLEAHPKSPLVPDAL 113

Query: 135 YLVG-------MSYAQMIRDVPYDQRATKLML-------QYMSRIVERYTNSPYVKGARF 180
            L+        +       D    + A +  L            ++ R+  S        
Sbjct: 114 ALLARQDRAALLPLLNGYPDHYRTREALERALVRDPDDHTLAGALLARFPESTLAYAMAT 173

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR---FQLVLANYSDAEHAEEAMARLVEAY 237
                       E+    + L     VA+I R    +  LA Y  A    E +       
Sbjct: 174 RREKI------GELSPAEWQL-----VASIYRRVNAKQALAAYERAPATPENLLERARLQ 222

Query: 238 VALALMDEAREVVSLIQERYPQGY 261
             L     ARE+  L+  R+P+  
Sbjct: 223 RKLGDKPAARELYELVLRRFPESP 246



 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 76/212 (35%), Gaps = 35/212 (16%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
               + E+A L  K  +   A E +    R FP + +    +L +AF      +  +   
Sbjct: 211 TPENLLERARLQRKLGDKPAARELYELVLRRFPESPL----VLDAAF------ERAELLG 260

Query: 116 LGEEYITQYP----ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            GE +    P     ++  D V            +       A ++ +    R+VERY  
Sbjct: 261 AGEAFAALEPWERASAERGDEVL-------WARSQIAARRLDAPEMAIPLYRRLVERYPQ 313

Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
           S     A +       +LAA+         +RG   AA    + ++ N+     A +A  
Sbjct: 314 SAKAPNAAW-------ELAAQS-------AERGNTGAARSYARWLVRNHPADPFAPKAAF 359

Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
            L +         EAR     + +RYP+ Y+A
Sbjct: 360 WLGKWAEQAGATAEARSQFREVLKRYPRSYYA 391



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 32/107 (29%), Gaps = 8/107 (7%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A   + +    +P +  A  +    A      G    A S     +  +P         +
Sbjct: 300 AIPLYRRLVERYPQSAKAPNAAWELAAQSAERGNTGAARSYARWLVRNHPADPFAPKAAF 359

Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
            +G  +A+          AT         +++RY  S Y   +   +
Sbjct: 360 WLGK-WAEQA-------GATAEARSQFREVLKRYPRSYYAWRSAARL 398


>gi|88861312|ref|ZP_01135943.1| putative periplasmic protein contains a protein prenylyltransferase
           domain [Pseudoalteromonas tunicata D2]
 gi|88816691|gb|EAR26515.1| putative periplasmic protein contains a protein prenylyltransferase
           domain [Pseudoalteromonas tunicata D2]
          Length = 248

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 53/129 (41%), Gaps = 15/129 (11%)

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           +Y + ++ +  D+R     +      +++Y  S YV  A +++   ++            
Sbjct: 130 AYDRAVQMIMKDKRY-DQAIPQFQTFLQQYPQSVYVPNAHYWLGQLQSM----------- 177

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
              + +  AA   F+ V+  Y D+    +AM +L           +A+ ++  + ++YP+
Sbjct: 178 ---KNDVDAAKTHFEAVVNGYPDSNKRPDAMLKLAAVLQKQGNDAKAKTIMQQLIDQYPE 234

Query: 260 GYWARYVET 268
              A+  + 
Sbjct: 235 STAAKLAKD 243



 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 49/138 (35%), Gaps = 9/138 (6%)

Query: 46  VYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
             + +++    + + Y++AV   +K++ + +A   F    + +P +     +      +Q
Sbjct: 116 EEVSTISSNLSENDAYDRAVQMIMKDKRYDQAIPQFQTFLQQYPQSVYVPNAHYWLGQLQ 175

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
                   A +  E  +  YP+S         +     +   D              M +
Sbjct: 176 SMKNDVDAAKTHFEAVVNGYPDSNKRPDAMLKLAAVLQKQGNDA--------KAKTIMQQ 227

Query: 165 IVERYTNSPYVKGARFYV 182
           ++++Y  S   K A+  +
Sbjct: 228 LIDQYPESTAAKLAKDRI 245



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 44/124 (35%), Gaps = 22/124 (17%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
              +Y QA    + ++ QYP+S  V   +Y +G      ++ +  D  A K    +   +
Sbjct: 140 KDKRYDQAIPQFQTFLQQYPQSVYVPNAHYWLG-----QLQSMKNDVDAAK---THFEAV 191

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           V  Y +S     A   +                   K+G    A    Q ++  Y ++  
Sbjct: 192 VNGYPDSNKRPDAMLKLAAVLQ--------------KQGNDAKAKTIMQQLIDQYPESTA 237

Query: 226 AEEA 229
           A+ A
Sbjct: 238 AKLA 241


>gi|237719009|ref|ZP_04549490.1| TPR-domain-containing protein [Bacteroides sp. 2_2_4]
 gi|229451787|gb|EEO57578.1| TPR-domain-containing protein [Bacteroides sp. 2_2_4]
          Length = 1005

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 72/218 (33%), Gaps = 36/218 (16%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK-------YQQA 113
           Y    +    +++++A  YF +    +        +    A      G        +++A
Sbjct: 513 YNLGYIAFHRKDYTQASNYFQK----YVQLEKGENAT-ALADAYNRIGDCHLHVRNFEEA 567

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
                +       S   DY +Y + +                   +  ++R+V +Y  SP
Sbjct: 568 KQYYSQAEQMNTSS--GDYSFYQLALVSGLQKDYTGK--------ITLLNRLVGKYPASP 617

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
           Y   A                E GR Y+       AI  F+ +L  Y ++  + +A A +
Sbjct: 618 YAVNAI--------------YEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEI 663

Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
              Y      ++A E    + E+YP    AR     +K
Sbjct: 664 GLLYYQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLK 701



 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 34/80 (42%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                    +YEK   ++   N ++A   F +    +P + V+RK+      + Y  G Y
Sbjct: 614 PASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEIGLLYYQKGDY 673

Query: 111 QQAASLGEEYITQYPESKNV 130
            QA    ++ I +YP S+  
Sbjct: 674 NQAIEAYKQVIEKYPGSEEA 693



 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 39/267 (14%), Positives = 75/267 (28%), Gaps = 55/267 (20%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
           +C  +            D  T       +Y++     +E+N++ A        +  P A 
Sbjct: 9   ICAAICCTPIIGFAQTGDKFTST---DNLYKEGKELFQEKNYAAALPALKAFVKQKPVAS 65

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA--------- 142
           + + +  M     Y      +   L  +Y+ +YP++   + +Y L+   Y          
Sbjct: 66  LLQDAEYMLVSSAYELKDKNR-IELLRKYLDRYPDTPYANRIYALLASCYFYEGKYDEAL 124

Query: 143 --------QMIRDVPYDQ------------RATKLMLQYMSRIVERYTNSPYVKGARFYV 182
                    ++ +   D                +    +   +        Y K   +Y+
Sbjct: 125 ALFNSADLDLLGNEERDDCTYQLATCYLKTDNLREAAIWFETLRANSP--KYAKDCDYYL 182

Query: 183 TVGRNQLAAKE--------------------VEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
           +  R                             I   Y +   Y  A    Q  L+ Y +
Sbjct: 183 SYIRYTQKRYSEALKGFLPLQDDSKYKALVPYYIAEIYTQLKNYDKAQIVAQNYLSAYPN 242

Query: 223 AEHAEEAMARLVEAYVALALMDEAREV 249
            EHA E    L +AY       +A E 
Sbjct: 243 NEHAAEMYRILGDAYYHFGQYHQAVEA 269



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 47/125 (37%), Gaps = 8/125 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A++   +++++      N+    +P +  A  ++              QA +  +E 
Sbjct: 587 YQLALVSGLQKDYTGKITLLNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKEL 646

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +T+YPES         +G+ Y Q               ++   +++E+Y  S   + A  
Sbjct: 647 LTKYPESPVSRKAAAEIGLLYYQK--------GDYNQAIEAYKQVIEKYPGSEEARLAMR 698

Query: 181 YVTVG 185
            +   
Sbjct: 699 DLKSI 703



 Score = 43.2 bits (101), Expect = 0.038,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 77/220 (35%), Gaps = 36/220 (16%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A ++ + +N+ KA          +P    A +   +     Y  G+Y QA      Y
Sbjct: 214 YYIAEIYTQLKNYDKAQIVAQNYLSAYPNNEHAAEMYRILGDAYYHFGQYHQAVEAFNNY 273

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           + +   +   D   Y++G+SY Q         +      + + ++     N    + A  
Sbjct: 274 LNKDRSAPRRD-ALYMLGLSYYQT--------KVYSKAAETLGKVTTD--NDALTQNAYL 322

Query: 181 YVTVGRNQLAAK---------------EVEI---GRYYL-------KRGEYVAAIPRFQL 215
           ++ +   QLA K                ++I     Y             +  ++  F+ 
Sbjct: 323 HMGLSYLQLAEKNKARMAFEQAAASNANMQIKEQAAYNYALCLHETSFSAFGESVTAFEK 382

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
            L  +  + +AE+  + LVE Y+     D A + +  I +
Sbjct: 383 FLNEFPTSPYAEKVSSYLVEVYMNTRSYDAALKSIDRIAK 422



 Score = 42.8 bits (100), Expect = 0.048,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 65/190 (34%), Gaps = 28/190 (14%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A  +LK  N  +A  +F     + P    A+      ++++Y+  +Y +A    + +
Sbjct: 145 YQLATCYLKTDNLREAAIWFETLRANSP--KYAKDCDYYLSYIRYTQKRYSEAL---KGF 199

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +    +SK    V Y +   Y Q+        +            +  Y N+ +      
Sbjct: 200 LPLQDDSKYKALVPYYIAEIYTQL--------KNYDKAQIVAQNYLSAYPNNEHAAEMYR 251

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
            +              G  Y   G+Y  A+  F   L     +    +A+  L  +Y   
Sbjct: 252 IL--------------GDAYYHFGQYHQAVEAFNNYLNK-DRSAPRRDALYMLGLSYYQT 296

Query: 241 ALMDEAREVV 250
            +  +A E +
Sbjct: 297 KVYSKAAETL 306



 Score = 35.9 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 50/167 (29%), Gaps = 22/167 (13%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           + YL+       +  +Y   + + + + +SKA E   + + D     + + + L      
Sbjct: 271 NNYLNKDRSAPRRDALYMLGLSYYQTKVYSKAAETLGKVTTDN--DALTQNAYLHMGLSY 328

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
               +  +A    E+        +  +   Y   +   +          A    +    +
Sbjct: 329 LQLAEKNKARMAFEQAAASNANMQIKEQAAYNYALCLHETSFS------AFGESVTAFEK 382

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
            +  +  SPY +    Y+                 Y+    Y AA+ 
Sbjct: 383 FLNEFPTSPYAEKVSSYLVEV--------------YMNTRSYDAALK 415


>gi|83592432|ref|YP_426184.1| hypothetical protein Rru_A1096 [Rhodospirillum rubrum ATCC 11170]
 gi|83575346|gb|ABC21897.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170]
          Length = 279

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 39/124 (31%), Gaps = 17/124 (13%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A   L+  ++  A + F       P   +A  +        Y  G Y+QAA     +
Sbjct: 159 YNYAFSLLRNADYPAAEQAFKAFLDQHPKGSLAGNAQYWLGETYYVRGDYEQAAVA---F 215

Query: 121 I---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           +     +P+S         +G++ A +          +K       R+  +Y        
Sbjct: 216 MGGYQSHPDSSKGPDNLLKLGLAMANL--------GKSKEACAAFGRLESQYPK---AAD 264

Query: 178 ARFY 181
           A   
Sbjct: 265 AIKR 268



 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 36/103 (34%), Gaps = 14/103 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              Q     ++++        A++++              G  Y  RG+Y  A   F   
Sbjct: 173 AAEQAFKAFLDQHPKGSLAGNAQYWL--------------GETYYVRGDYEQAAVAFMGG 218

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
             ++ D+    + + +L  A   L    EA      ++ +YP+
Sbjct: 219 YQSHPDSSKGPDNLLKLGLAMANLGKSKEACAAFGRLESQYPK 261


>gi|294056496|ref|YP_003550154.1| hypothetical protein Caka_2971 [Coraliomargarita akajimensis DSM
           45221]
 gi|293615829|gb|ADE55984.1| hypothetical protein Caka_2971 [Coraliomargarita akajimensis DSM
           45221]
          Length = 1008

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 47/148 (31%), Gaps = 28/148 (18%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            Y   +  ++  +F +A +  +   ++FP +  A  +LL     Q+   ++  A     +
Sbjct: 477 YYWSGLATVQLSDFVEAIKRMDVVLKEFPTSLYAEDALLRKGIAQFYLQEFGAARVTLTK 536

Query: 120 YITQYPESKNVDYVYY------------LVGMSYAQMIRDVPYDQRATKLM---LQYMSR 164
           Y   YP    +D  YY               +   +    +   Q         +  M  
Sbjct: 537 YTQDYPRGVAIDQAYYFLGEVESYEGYVERALKNFRKCDKLTKSQEMHDAASFRIGNMLE 596

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAK 192
           ++ERY             T  R+  A  
Sbjct: 597 LLERY-------------TEMRDHFAKY 611



 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 6/80 (7%)

Query: 197 GRYYL------KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
           G YY       +  ++V AI R  +VL  +  + +AE+A+ R   A   L     AR  +
Sbjct: 475 GLYYWSGLATVQLSDFVEAIKRMDVVLKEFPTSLYAEDALLRKGIAQFYLQEFGAARVTL 534

Query: 251 SLIQERYPQGYWARYVETLV 270
           +   + YP+G         +
Sbjct: 535 TKYTQDYPRGVAIDQAYYFL 554


>gi|254415937|ref|ZP_05029694.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
 gi|196177364|gb|EDX72371.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
          Length = 268

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 77/235 (32%), Gaps = 31/235 (13%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
             +    ++   F      Q    V  ++ ++     E+Y + V  L++ +++ A   F 
Sbjct: 8   LTILGLMTVLTGFSEAVHAQQPIRVVQEAPSEELTAVELYNQGVDKLEKGDYAGAISDFG 67

Query: 82  QCSRDFPFAGVARKS--LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
              +  P       +       +  +S G Y  A     + I   P   +    Y   G 
Sbjct: 68  DALKLEP-----EDADTYYNRGYAYHSLGNYDAAIYDYTQAIKLNP---DFSQAYSNRGY 119

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYT--NSPYVKGARFYVTVGRNQLA----AKE 193
           +Y      V  D    +  +   ++ +E     ++ Y+     Y  +G ++ A    AK 
Sbjct: 120 TYF-----VRRD---YQKAIADFTKAIEIDPENDTAYISRGNAYDELGNSEEALNDYAKA 171

Query: 194 VEI----GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
           +EI     R Y  RG       R +      +D   + E      EAY    L  
Sbjct: 172 LEINPENARLYYNRGL---TRNRLEQYEDAIADYTKSIELQPTFAEAYYNRGLTQ 223


>gi|160884096|ref|ZP_02065099.1| hypothetical protein BACOVA_02072 [Bacteroides ovatus ATCC 8483]
 gi|156110438|gb|EDO12183.1| hypothetical protein BACOVA_02072 [Bacteroides ovatus ATCC 8483]
          Length = 1005

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 72/218 (33%), Gaps = 36/218 (16%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK-------YQQA 113
           Y    +    +++++A  YF +    +        +    A      G        +++A
Sbjct: 513 YNLGYIAFHRKDYTQASNYFQK----YVQLEKGENAT-ALADAYNRIGDCHLHVRNFEEA 567

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
                +       S   DY +Y + +                   +  ++R+V +Y  SP
Sbjct: 568 KQYYSQAEQMNTSS--GDYSFYQLALVSGLQKDYTGK--------ITLLNRLVGKYPASP 617

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
           Y   A                E GR Y+       AI  F+ +L  Y ++  + +A A +
Sbjct: 618 YAVNAI--------------YEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEI 663

Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
              Y      ++A E    + E+YP    AR     +K
Sbjct: 664 GLLYYQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLK 701



 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 34/80 (42%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                    +YEK   ++   N ++A   F +    +P + V+RK+      + Y  G Y
Sbjct: 614 PASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEIGLLYYQKGDY 673

Query: 111 QQAASLGEEYITQYPESKNV 130
            QA    ++ I +YP S+  
Sbjct: 674 NQAIEAYKQVIEKYPGSEEA 693



 Score = 52.0 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 82/252 (32%), Gaps = 20/252 (7%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
           +C  +            D  T       +Y++     +E+N++ A        +  P A 
Sbjct: 9   ICAAICCTPIIGFAQTGDKFTST---DNLYKEGKELFQEKNYAAALPALKAFVKQKPAAS 65

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA--------- 142
           + + +  M     Y      +   L  +Y+ +YP++   + +Y L+   Y          
Sbjct: 66  LLQDAEYMLVSSAYELKDKNR-IELLRKYLDRYPDTPYANRIYALLASCYFYEGKYDEAL 124

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
            +      D    +       ++   Y  +  ++ A  +    R        +   YYL 
Sbjct: 125 ALFNSADLDLLGNEERDDCTYQLATCYLKTDNLREAAIWFETLRANSPKYAKD-CDYYLS 183

Query: 203 RGEYVAAIPRFQLVLANY----SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
              Y     R+   L  +     D+++       + E YV L   D+A+ V       YP
Sbjct: 184 YIRYTQ--KRYTEALKGFLPLQDDSKYKTLVPYYIAEIYVQLKNYDKAQIVAQNYLSAYP 241

Query: 259 QGYWARYVETLV 270
              +A  +  ++
Sbjct: 242 NNEYAAEMYRIL 253



 Score = 49.0 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 47/125 (37%), Gaps = 8/125 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A++   +++++      N+    +P +  A  ++              QA +  +E 
Sbjct: 587 YQLALVSGLQKDYTGKITLLNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKEL 646

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +T+YPES         +G+ Y Q               ++   +++E+Y  S   + A  
Sbjct: 647 LTKYPESPVSRKAAAEIGLLYYQK--------GDYNQAIEAYKQVIEKYPGSEEARLAMR 698

Query: 181 YVTVG 185
            +   
Sbjct: 699 DLKSI 703



 Score = 44.3 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 65/190 (34%), Gaps = 28/190 (14%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A  +LK  N  +A  +F     + P    A+      ++++Y+  +Y +A    + +
Sbjct: 145 YQLATCYLKTDNLREAAIWFETLRANSP--KYAKDCDYYLSYIRYTQKRYTEAL---KGF 199

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +    +SK    V Y +   Y Q+        +            +  Y N+ Y      
Sbjct: 200 LPLQDDSKYKTLVPYYIAEIYVQL--------KNYDKAQIVAQNYLSAYPNNEYAAEMYR 251

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
            +              G  Y   G+Y  A+  F   L     +    +A+  L  +Y   
Sbjct: 252 IL--------------GDVYYHFGQYHQAVEAFNNYLNK-DRSAPRRDALYMLGLSYYQT 296

Query: 241 ALMDEAREVV 250
            +  +A E +
Sbjct: 297 KVYSKAAETL 306



 Score = 35.9 bits (82), Expect = 6.3,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 50/167 (29%), Gaps = 22/167 (13%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           + YL+       +  +Y   + + + + +SKA E   + + D     + + + L      
Sbjct: 271 NNYLNKDRSAPRRDALYMLGLSYYQTKVYSKAAETLGKVTTDN--DALTQNAYLHMGLSY 328

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
               +  +A    E+        +  +   Y   +   +          A    +    +
Sbjct: 329 LQLAEKNKARMAFEQAAASNANMQIKEQAAYNYALCLHETSFS------AFGESVTAFEK 382

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
            +  +  SPY +    Y+                 Y+    Y AA+ 
Sbjct: 383 FLNEFPTSPYAEKVSSYLVEV--------------YMNTRSYDAALK 415


>gi|299144753|ref|ZP_07037821.1| TPR-domain containing protein [Bacteroides sp. 3_1_23]
 gi|298515244|gb|EFI39125.1| TPR-domain containing protein [Bacteroides sp. 3_1_23]
          Length = 1005

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 72/218 (33%), Gaps = 36/218 (16%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK-------YQQA 113
           Y    +    +++++A  YF +    +        +    A      G        +++A
Sbjct: 513 YNLGYIAFHRKDYTQASNYFQK----YVQLEKGENAT-ALADAYNRIGDCHLHVRNFEEA 567

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
                +       S   DY +Y + +                   +  ++R+V +Y  SP
Sbjct: 568 KQYYSQAEQMNTSS--GDYSFYQLALVSGLQKDYTGK--------ITLLNRLVGKYPASP 617

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
           Y   A                E GR Y+       AI  F+ +L  Y ++  + +A A +
Sbjct: 618 YAVNAI--------------YEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEI 663

Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
              Y      ++A E    + E+YP    AR     +K
Sbjct: 664 GLLYYQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLK 701



 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 34/80 (42%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                    +YEK   ++   N ++A   F +    +P + V+RK+      + Y  G Y
Sbjct: 614 PASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEIGLLYYQKGDY 673

Query: 111 QQAASLGEEYITQYPESKNV 130
            QA    ++ I +YP S+  
Sbjct: 674 NQAIEAYKQVIEKYPGSEEA 693



 Score = 51.7 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/267 (14%), Positives = 75/267 (28%), Gaps = 55/267 (20%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
           +C  +            D  T       +Y++     +E+N++ A        +  P A 
Sbjct: 9   ICAAICCTPIIGFAQTGDKFTST---DNLYKEGKELFQEKNYAAALPALKAFVKQKPAAS 65

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA--------- 142
           + + +  M     Y      +   L  +Y+ +YP++   + +Y L+   Y          
Sbjct: 66  LLQDAEYMLVSSAYELKDKNR-IELLRKYLDRYPDTPYANRIYALLASCYFYEGKYDEAL 124

Query: 143 --------QMIRDVPYDQ------------RATKLMLQYMSRIVERYTNSPYVKGARFYV 182
                    ++ +   D                +    +   +        Y K   +Y+
Sbjct: 125 ALFNSADLDLLGNEERDDCTYQLATCYLKTDNLREAAIWFETLRANSP--KYAKDCDYYL 182

Query: 183 TVGRNQLAAKE--------------------VEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
           +  R                             I   Y +   Y  A    Q  L+ Y +
Sbjct: 183 SYIRYTQKRYSEALKGFLPLQDDSKYKALVPYYIAEIYTQLKNYDKAQIVAQNYLSAYPN 242

Query: 223 AEHAEEAMARLVEAYVALALMDEAREV 249
            EHA E    L +AY       +A E 
Sbjct: 243 NEHAAEMYRILGDAYYHFGQYHQAVEA 269



 Score = 49.0 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 47/125 (37%), Gaps = 8/125 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A++   +++++      N+    +P +  A  ++              QA +  +E 
Sbjct: 587 YQLALVSGLQKDYTGKITLLNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKEL 646

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +T+YPES         +G+ Y Q               ++   +++E+Y  S   + A  
Sbjct: 647 LTKYPESPVSRKAAAEIGLLYYQK--------GDYNQAIEAYKQVIEKYPGSEEARLAMR 698

Query: 181 YVTVG 185
            +   
Sbjct: 699 DLKSI 703



 Score = 43.2 bits (101), Expect = 0.039,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 77/220 (35%), Gaps = 36/220 (16%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A ++ + +N+ KA          +P    A +   +     Y  G+Y QA      Y
Sbjct: 214 YYIAEIYTQLKNYDKAQIVAQNYLSAYPNNEHAAEMYRILGDAYYHFGQYHQAVEAFNNY 273

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           + +   +   D   Y++G+SY Q         +      + + ++     N    + A  
Sbjct: 274 LNKDRSAPRRD-ALYMLGLSYYQT--------KVYSKAAETLGKVTTD--NDALTQNAYL 322

Query: 181 YVTVGRNQLAAK---------------EVEI---GRYYL-------KRGEYVAAIPRFQL 215
           ++ +   QLA K                ++I     Y             +  ++  F+ 
Sbjct: 323 HMGLSYLQLAEKNKARMAFEQAAASNANMQIKEQAAYNYALCLHETSFSAFGESVTAFEK 382

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
            L  +  + +AE+  + LVE Y+     D A + +  I +
Sbjct: 383 FLNEFPTSPYAEKVSSYLVEVYMNTRSYDAALKSIDRIAK 422



 Score = 42.8 bits (100), Expect = 0.050,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 65/190 (34%), Gaps = 28/190 (14%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A  +LK  N  +A  +F     + P    A+      ++++Y+  +Y +A    + +
Sbjct: 145 YQLATCYLKTDNLREAAIWFETLRANSP--KYAKDCDYYLSYIRYTQKRYSEAL---KGF 199

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +    +SK    V Y +   Y Q+        +            +  Y N+ +      
Sbjct: 200 LPLQDDSKYKALVPYYIAEIYTQL--------KNYDKAQIVAQNYLSAYPNNEHAAEMYR 251

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
            +              G  Y   G+Y  A+  F   L     +    +A+  L  +Y   
Sbjct: 252 IL--------------GDAYYHFGQYHQAVEAFNNYLNK-DRSAPRRDALYMLGLSYYQT 296

Query: 241 ALMDEAREVV 250
            +  +A E +
Sbjct: 297 KVYSKAAETL 306



 Score = 35.9 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 50/167 (29%), Gaps = 22/167 (13%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           + YL+       +  +Y   + + + + +SKA E   + + D     + + + L      
Sbjct: 271 NNYLNKDRSAPRRDALYMLGLSYYQTKVYSKAAETLGKVTTDN--DALTQNAYLHMGLSY 328

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
               +  +A    E+        +  +   Y   +   +          A    +    +
Sbjct: 329 LQLAEKNKARMAFEQAAASNANMQIKEQAAYNYALCLHETSFS------AFGESVTAFEK 382

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
            +  +  SPY +    Y+                 Y+    Y AA+ 
Sbjct: 383 FLNEFPTSPYAEKVSSYLVEV--------------YMNTRSYDAALK 415


>gi|187735051|ref|YP_001877163.1| Tetratricopeptide TPR_2 repeat protein [Akkermansia muciniphila
           ATCC BAA-835]
 gi|187425103|gb|ACD04382.1| Tetratricopeptide TPR_2 repeat protein [Akkermansia muciniphila
           ATCC BAA-835]
          Length = 1077

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 70/228 (30%), Gaps = 25/228 (10%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                 +  +Y  A+   +     K  E   Q  ++FP +  A     +S        K+
Sbjct: 371 PDAPGREDNLYYLAMTTWQLGEADKGGELVAQHLKEFPNSKYAPMLNTLSLEGLLKEKKF 430

Query: 111 QQAASLGEEYITQY---PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
                  ++ +  +   P  K  +   Y  G S   +      D    K  +  + R V+
Sbjct: 431 DLCVQQADKVMELHKDDPTHKFYELALYCKGASLFNLG---AADASRYKEAVPVLERFVK 487

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y +S Y+K A   + +            G  Y   G    AI  F   +A + D   A 
Sbjct: 488 EYRDSTYLKTA---MYLL-----------GETYTNLGNTDEAIRSFTNYIARFPDKGEAN 533

Query: 228 EAMARLVEAYVAL-----ALMDEAREVVSLIQERYPQGYWARYVETLV 270
            A      A+  L        + A +    I + +       Y   L+
Sbjct: 534 MAAVLYDRAFNYLNRKNPGDEELAAKDAKEIVDNFKDHRLFPYANNLL 581



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/199 (13%), Positives = 64/199 (32%), Gaps = 20/199 (10%)

Query: 38  WERQSSR--DVYLDSVTDVRYQREVYEKAVLFLKEQ-----NFSKAYEYFNQCSRDFPFA 90
             +Q+ +  +++ D  T   Y+  +Y K              + +A     +  +++  +
Sbjct: 433 CVQQADKVMELHKDDPTHKFYELALYCKGASLFNLGAADASRYKEAVPVLERFVKEYRDS 492

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP--ESKNVDYVYYLVGMSYAQMIRDV 148
              + ++ +      + G   +A      YI ++P     N+  V Y    +Y       
Sbjct: 493 TYLKTAMYLLGETYTNLGNTDEAIRSFTNYIARFPDKGEANMAAVLYDRAFNYLNR---- 548

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
             +    +L  +    IV+ + +      A   +          E E   Y      ++A
Sbjct: 549 -KNPGDEELAAKDAKEIVDNFKDHRLFPYANNLLANLCAGSKEHEQEAEGY------FLA 601

Query: 209 AIPRFQLVLANYSDAEHAE 227
           A+   + +      AE   
Sbjct: 602 ALESAKKLGDKRPAAEAVY 620



 Score = 44.3 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 58/179 (32%), Gaps = 41/179 (22%)

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A +  +     YP++   +   Y + M+  Q+               + +++ ++ + NS
Sbjct: 359 ARAAYQLINESYPDAPGREDNLYYLAMTTWQL--------GEADKGGELVAQHLKEFPNS 410

Query: 173 PYVKGAR----------FYVTVGRNQLAAK--EVE----IGRYY-----------LKRGE 205
            Y                   +   Q A K  E+       ++Y              G 
Sbjct: 411 KYAPMLNTLSLEGLLKEKKFDLCVQQ-ADKVMELHKDDPTHKFYELALYCKGASLFNLGA 469

Query: 206 -----YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
                Y  A+P  +  +  Y D+ + + AM  L E Y  L   DEA    +    R+P 
Sbjct: 470 ADASRYKEAVPVLERFVKEYRDSTYLKTAMYLLGETYTNLGNTDEAIRSFTNYIARFPD 528



 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 28/61 (45%)

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           A   +QL+  +Y DA   E+ +  L      L   D+  E+V+   + +P   +A  + T
Sbjct: 359 ARAAYQLINESYPDAPGREDNLYYLAMTTWQLGEADKGGELVAQHLKEFPNSKYAPMLNT 418

Query: 269 L 269
           L
Sbjct: 419 L 419



 Score = 35.5 bits (81), Expect = 8.0,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 9/95 (9%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS---AFVQYSAGKYQQAASL 116
            Y+K V   + +N+ +A E F  C   FP +   +   +            G + + A L
Sbjct: 79  YYQKGVCLAQLKNYKEAVEAFKACYTKFP-SAKNQLVKMALFREGENYCRLGDFAKGAEL 137

Query: 117 GEEYITQYPESK-----NVDYVYYLVGMSYAQMIR 146
            E+++ +Y         N   V  L+   Y +M  
Sbjct: 138 LEKFLKEYRSDPVARNVNAGEVQGLLAQCYFKMSP 172


>gi|332704037|ref|ZP_08424125.1| tol-pal system protein YbgF [Desulfovibrio africanus str. Walvis
           Bay]
 gi|332554186|gb|EGJ51230.1| tol-pal system protein YbgF [Desulfovibrio africanus str. Walvis
           Bay]
          Length = 289

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 54/126 (42%), Gaps = 8/126 (6%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
               + +Y +A+   K++N+  A   + +  + +P   +   ++       Y  G + +A
Sbjct: 169 SDPAQALYLRALDNFKKRNYMNAQSMWAEFVKAYPKHELVSNAIFWQGESFYQTGDFARA 228

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
               ++ IT+YP+S  +       G+++ ++ +D   D          +  +V++Y  S 
Sbjct: 229 VLSYQDVITKYPKSNKIPAAMLKQGIAFKKIGKDKAGDL--------VLQELVKKYPKSA 280

Query: 174 YVKGAR 179
             K A+
Sbjct: 281 EAKRAK 286



 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/144 (15%), Positives = 48/144 (33%), Gaps = 22/144 (15%)

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           +S +     YL  +   +         R         +  V+ Y     V  A F+    
Sbjct: 167 QSSDPAQALYLRALDNFKK--------RNYMNAQSMWAEFVKAYPKHELVSNAIFWQ--- 215

Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
                      G  + + G++  A+  +Q V+  Y  +     AM +   A+  +     
Sbjct: 216 -----------GESFYQTGDFARAVLSYQDVITKYPKSNKIPAAMLKQGIAFKKIGKDKA 264

Query: 246 AREVVSLIQERYPQGYWARYVETL 269
              V+  + ++YP+   A+  ++ 
Sbjct: 265 GDLVLQELVKKYPKSAEAKRAKSF 288


>gi|302342735|ref|YP_003807264.1| cell wall hydrolase/autolysin [Desulfarculus baarsii DSM 2075]
 gi|301639348|gb|ADK84670.1| cell wall hydrolase/autolysin [Desulfarculus baarsii DSM 2075]
          Length = 584

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 41/126 (32%), Gaps = 15/126 (11%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLL------MSAFVQYSAG-KYQQAASLGEEYITQY 124
           N+    E F++     P   +A   LL        A+ Q+       +A+      I  +
Sbjct: 59  NWVSLAERFSRIYTADPSGPLAPGCLLWTGRIFAGAYEQFKQKKDLDKASDALRRLINHF 118

Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
           P+S   D    ++   + +            K     + R+V  Y NS     A+  +  
Sbjct: 119 PDSNLADDAQLMIAELHIK--------HGDVKTAYLELLRVVVNYPNSDMAPEAKKRLDE 170

Query: 185 GRNQLA 190
               LA
Sbjct: 171 LERTLA 176



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 42/128 (32%), Gaps = 24/128 (18%)

Query: 114 ASLGEEYITQY---PESKNVDYVYYLVGMSY---AQMIRDVPYDQRATKLMLQYMSRIVE 167
            SL E +   Y   P            G  +    +  +     ++        + R++ 
Sbjct: 61  VSLAERFSRIYTADPSGPLAPGCLLWTGRIFAGAYEQFKQ----KKDLDKASDALRRLIN 116

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            + +S     A+  +          E+ I     K G+   A      V+ NY +++ A 
Sbjct: 117 HFPDSNLADDAQLMIA---------ELHI-----KHGDVKTAYLELLRVVVNYPNSDMAP 162

Query: 228 EAMARLVE 235
           EA  RL E
Sbjct: 163 EAKKRLDE 170



 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 28/75 (37%), Gaps = 1/75 (1%)

Query: 60  VYEKAVLFL-KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++  A     ++++  KA +   +    FP + +A  + LM A +    G  + A     
Sbjct: 90  IFAGAYEQFKQKKDLDKASDALRRLINHFPDSNLADDAQLMIAELHIKHGDVKTAYLELL 149

Query: 119 EYITQYPESKNVDYV 133
             +  YP S      
Sbjct: 150 RVVVNYPNSDMAPEA 164


>gi|291527181|emb|CBK92767.1| Tetratricopeptide repeat [Eubacterium rectale M104/1]
          Length = 320

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 47/244 (19%), Positives = 78/244 (31%), Gaps = 36/244 (14%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
            ALT+   +    L G           D   D    R+     +  ++  ++  A + F 
Sbjct: 7   MALTLTVVLTAGMLTGCGSG-------DKAKDKDAYRQY---GINCIENGSYDDAVDAFQ 56

Query: 82  QCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           +       +  A    L   +     QY +G    A       I     +K+ D  YYL 
Sbjct: 57  KALDQSVGSVGAE--ELDICYYKAKAQYLSGDVDGAIDTYTAIID---YNKDSD-AYYLR 110

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERY-----TNSPYV--KGARFYVT---VGRN 187
           G  Y     D     +  K  L   +   E Y     T S Y      + Y+      + 
Sbjct: 111 GCIYFAK-NDSDKGLKDFKTALSENNDNYELYLGVYETLSKYGMNDQGKEYLDNALKLKA 169

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
           + A   ++ GR Y   G+Y +AI   Q  +      E   +A   + E Y      D ++
Sbjct: 170 KTADDYMQRGRIYTLLGDYDSAIKSLQKAID-----EKLVKANYYMGEVYQKKGDNDSSQ 224

Query: 248 EVVS 251
           +   
Sbjct: 225 KYFK 228



 Score = 42.8 bits (100), Expect = 0.052,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 25/76 (32%), Gaps = 7/76 (9%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           E+       +   N+  A  YF    +           ++           +G +  A S
Sbjct: 240 ELMNMGQAQMDNGNYDTAITYFQNALELESV----PNKQQITKAMIIAYEYSGDFATAKS 295

Query: 116 LGEEYITQYPESKNVD 131
             EEY+  YP+ ++  
Sbjct: 296 KMEEYMKDYPDDEDAA 311


>gi|57167958|ref|ZP_00367097.1| probable lipoprotein Cj1074c [Campylobacter coli RM2228]
 gi|305431892|ref|ZP_07401059.1| probable lipoprotein [Campylobacter coli JV20]
 gi|57020332|gb|EAL57001.1| probable lipoprotein Cj1074c [Campylobacter coli RM2228]
 gi|304444976|gb|EFM37622.1| probable lipoprotein [Campylobacter coli JV20]
          Length = 215

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 68/198 (34%), Gaps = 21/198 (10%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
           +C L+G    +      D         E Y++ +  L++++  KA +++N  + +     
Sbjct: 7   LCILLGILFSACS-TKNDEGLYNLSASEWYKQIIKDLQDKDLEKADDHYNGMASEHIADP 65

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
           +   + ++ A       +YQ A    +EY  ++  S+N DY+ YL   +          +
Sbjct: 66  LLETTQIILAQAHMDEEEYQLAEFYLDEYNKKFGNSRNADYIRYLKIKAKFDAFAVPNRN 125

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           Q       + +   +  Y  + Y    +  +T            +  +YL          
Sbjct: 126 QALMLESQKEIDSFLNDYPYTEYEPLVQTMLTK---------FNLAVFYLN--------- 167

Query: 212 RFQLVLANYSDAEHAEEA 229
               +   Y    H + A
Sbjct: 168 --DTIQDLYERTGHTQSA 183


>gi|39995292|ref|NP_951243.1| putative lipoprotein [Geobacter sulfurreducens PCA]
 gi|39982054|gb|AAR33516.1| lipoprotein, putative [Geobacter sulfurreducens PCA]
 gi|307634660|gb|ADI83018.2| peptidoglycan L,D-transpeptidase lipoprotein, YkuD family, TPR
           domain-containing [Geobacter sulfurreducens KN400]
          Length = 309

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/180 (12%), Positives = 50/180 (27%), Gaps = 73/180 (40%)

Query: 27  FFSIAVC---FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           FF + +C    L G                      ++++A     + N+S + + + + 
Sbjct: 12  FFPVCICCMLLLCGCSHH--------------RAASIFQEANDLFSQGNYSASLDAYTRI 57

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE------YITQYPESKNVDYVYYLV 137
               P                          +  +       +I  YP +++ DY     
Sbjct: 58  GETHP--------------------------AAKDRVLFEKGFIHAYPRNEHKDY----- 86

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
                             +  L+   ++V  +  S Y + +   +  G N +  K+  I 
Sbjct: 87  ------------------QKALECFEQLVREFPESRYRQDS-ERMIFGINTVVLKDGTIA 127


>gi|146283136|ref|YP_001173289.1| hypothetical protein PST_2801 [Pseudomonas stutzeri A1501]
 gi|145571341|gb|ABP80447.1| conserved hypothetical protein [Pseudomonas stutzeri A1501]
          Length = 270

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 46/130 (35%), Gaps = 8/130 (6%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D   ++  Y+ A   +K ++F KA + F    R +P +  A  +      V  + G  Q 
Sbjct: 147 DPAQEKLYYDAAFDLIKAKDFDKASQAFAAFLRKYPDSQYAGNAQYWLGEVNLAKGDLQG 206

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A          YP+   V    Y +         DV             + +++ +Y N+
Sbjct: 207 AGQAFARVSQAYPQHSKVPDSLYKLA--------DVEIRMGNRDKAQGILRQVIAQYPNT 258

Query: 173 PYVKGARFYV 182
              + A+  +
Sbjct: 259 SAAQLAQRQL 268



 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 41/109 (37%), Gaps = 14/109 (12%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           +      Q  +  + +Y +S Y   A++++      LA  +++             A   
Sbjct: 165 KDFDKASQAFAAFLRKYPDSQYAGNAQYWLGEVN--LAKGDLQ------------GAGQA 210

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           F  V   Y       +++ +L +  + +   D+A+ ++  +  +YP   
Sbjct: 211 FARVSQAYPQHSKVPDSLYKLADVEIRMGNRDKAQGILRQVIAQYPNTS 259


>gi|219847542|ref|YP_002461975.1| TPR repeat-containing protein [Chloroflexus aggregans DSM 9485]
 gi|219541801|gb|ACL23539.1| TPR repeat-containing protein [Chloroflexus aggregans DSM 9485]
          Length = 1112

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 47/136 (34%), Gaps = 18/136 (13%)

Query: 52   TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
            T+ R     Y +A+L +++ ++ +A    N+     P      ++        Y+ G+ +
Sbjct: 992  TNDRIAESFYRRALLAIRDNDYDQAIRDLNRTVTLQPNFP---EAYYWLGRAYYTQGRIE 1048

Query: 112  QAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
             A    E  IT  P     DY    +  G+        +  D+            ++ R 
Sbjct: 1049 NAQQAIERAITLNP-----DYSEAIFYSGL--------IAEDRANVAAARDAYQTLISRE 1095

Query: 170  TNSPYVKGARFYVTVG 185
              S + + AR  +   
Sbjct: 1096 PTSEWGQRARAQLERL 1111


>gi|294645887|ref|ZP_06723563.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a]
 gi|292638767|gb|EFF57109.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a]
          Length = 601

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 34/80 (42%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                    +YEK   ++   N ++A   F +    +P + V+RK+      + Y  G Y
Sbjct: 210 PASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEIGLLYYQKGDY 269

Query: 111 QQAASLGEEYITQYPESKNV 130
            QA    ++ I +YP S+  
Sbjct: 270 NQAIEAYKQVIEKYPGSEEA 289



 Score = 54.4 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 72/214 (33%), Gaps = 28/214 (13%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           Y    +    +++++A  YF +     +      +A  +             +++A    
Sbjct: 109 YNLGYIAFHRKDYTQASNYFQKYIQLEKGENATALA-DAYNRIGDCHLHVRNFEEAKQYY 167

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
            +       S   DY +Y + +                   +  ++R+V +Y  SPY   
Sbjct: 168 SQAEQMNTSS--GDYSFYQLALVSGLQKDYTGK--------ITLLNRLVGKYPASPYAVN 217

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           A                E GR Y+       AI  F+ +L  Y ++  + +A A +   Y
Sbjct: 218 AI--------------YEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEIGLLY 263

Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
                 ++A E    + E+YP    AR     +K
Sbjct: 264 YQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLK 297



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 47/125 (37%), Gaps = 8/125 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A++   +++++      N+    +P +  A  ++              QA +  +E 
Sbjct: 183 YQLALVSGLQKDYTGKITLLNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKEL 242

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +T+YPES         +G+ Y Q               ++   +++E+Y  S   + A  
Sbjct: 243 LTKYPESPVSRKAAAEIGLLYYQK--------GDYNQAIEAYKQVIEKYPGSEEARLAMR 294

Query: 181 YVTVG 185
            +   
Sbjct: 295 DLKSI 299


>gi|253990431|ref|YP_003041787.1| tol-pal system protein YbgF [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253781881|emb|CAQ85045.1| conserved hypothetical protein [Photorhabdus asymbiotica]
          Length = 255

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 53/140 (37%), Gaps = 9/140 (6%)

Query: 47  YLDSVTDVRYQREVYEKA-VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
            + S      ++  Y+ A  L +  + + KA   F    +++P +     +      + Y
Sbjct: 124 QVSSPVGTGSEKGDYDAAVHLAVNSKEYDKAIVSFQSFVKNYPKSSYIPNANYWLGQLHY 183

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
           + GK  +AA      + +YP+S+      Y VG+        +  D+           ++
Sbjct: 184 NKGKKDEAAYYFATVVKEYPKSQKSGESLYKVGL--------IMQDKGQKDKARSVYQQV 235

Query: 166 VERYTNSPYVKGARFYVTVG 185
           +++Y  S   K A   ++  
Sbjct: 236 MKQYPGSNVAKLAEKKLSTL 255



 Score = 51.7 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 40/112 (35%), Gaps = 14/112 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             +      V+ Y  S Y+  A +++                    +G+   A   F  V
Sbjct: 153 KAIVSFQSFVKNYPKSSYIPNANYWLGQLH--------------YNKGKKDEAAYYFATV 198

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           +  Y  ++ + E++ ++          D+AR V   + ++YP    A+  E 
Sbjct: 199 VKEYPKSQKSGESLYKVGLIMQDKGQKDKARSVYQQVMKQYPGSNVAKLAEK 250



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 24/58 (41%)

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            EY  AI  FQ  + NY  + +   A   L + +      DEA    + + + YP+  
Sbjct: 149 KEYDKAIVSFQSFVKNYPKSSYIPNANYWLGQLHYNKGKKDEAAYYFATVVKEYPKSQ 206


>gi|332828114|gb|EGK00832.1| hypothetical protein HMPREF9455_02847 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 386

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 73/224 (32%), Gaps = 36/224 (16%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM- 99
            +SR   +    D +  R +Y K  +     N ++      +     P     +++    
Sbjct: 81  NASRYADMAIQKDAKSARALYVKGSISSANGNHTQGITDIQKAISLAP-----KQAEYYT 135

Query: 100 -SAFVQYSAGKYQQAASLGEEYITQ-YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
               + ++   Y +A +   + +    P  K     +Y++G  YA         Q   K 
Sbjct: 136 GLGDIYFAQDDYTKALTNYRKAVNLPNPSEK----AFYMIGAVYAN--------QDNVKQ 183

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
            L            S   K    YVTV  N        IG+       Y  A   ++ + 
Sbjct: 184 ALDTFYVA-----KSKIEKDKELYVTVLNN--------IGKIEFDNKNYKDASEAYRELT 230

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             + D  +   ++ +LVE Y AL     A    + +   Y QG 
Sbjct: 231 EYFPDDYY---SLEKLVECYNALGYYSRADVSKARLYTAYEQGE 271


>gi|225620098|ref|YP_002721355.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
 gi|225214917|gb|ACN83651.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
          Length = 346

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 42/126 (33%), Gaps = 9/126 (7%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A     E N+ K+  Y+ + +  FP       +L   A   Y+   Y +A       +  
Sbjct: 226 AHKTFIEGNYIKSRMYYTKIAELFPRTEYGEDALFRIAQSYYNEKNYNKALDYYNR-VRL 284

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
                        +G+SY ++ R             + +   +  Y  +P V  AR Y+ 
Sbjct: 285 NNVYTLDAEALLYIGLSYFKVGRYSD--------SYKVLDTFISEYPANPNVSRAREYMQ 336

Query: 184 VGRNQL 189
             +  L
Sbjct: 337 ALQETL 342



 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 42/84 (50%), Gaps = 2/84 (2%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           +  ++  A  +  E+N++KA +Y+N+   +  +   A  +LL      +  G+Y  +  +
Sbjct: 256 EDALFRIAQSYYNEKNYNKALDYYNRVRLNNVYTLDAE-ALLYIGLSYFKVGRYSDSYKV 314

Query: 117 GEEYITQYPESKNVDYV-YYLVGM 139
            + +I++YP + NV     Y+  +
Sbjct: 315 LDTFISEYPANPNVSRAREYMQAL 338



 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 68/203 (33%), Gaps = 34/203 (16%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
                 ++ + +A  YF +             ++L  A V ++  +Y +A    E+++  
Sbjct: 153 GYQLFLQKKYGEALSYFLRYD--------GELAVLGRARVYFNMNEYDRAFETYEDFLKY 204

Query: 124 YPESKNVDYVY--YLV---GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
              S   D V   YL+    M++   I               Y ++I E +  + Y + A
Sbjct: 205 NKTSIYYDEVVRTYLIQVPAMAHKTFIEG------NYIKSRMYYTKIAELFPRTEYGEDA 258

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
            F               I + Y     Y  A+  +  V  N      A EA+  +  +Y 
Sbjct: 259 LFR--------------IAQSYYNEKNYNKALDYYNRVRLNNVYTLDA-EALLYIGLSYF 303

Query: 239 ALALMDEAREVVSLIQERYPQGY 261
            +    ++ +V+      YP   
Sbjct: 304 KVGRYSDSYKVLDTFISEYPANP 326


>gi|313205668|ref|YP_004044845.1| tetratricopeptide tpr_1 repeat-containing protein [Riemerella
           anatipestifer DSM 15868]
 gi|312444984|gb|ADQ81339.1| Tetratricopeptide TPR_1 repeat-containing protein [Riemerella
           anatipestifer DSM 15868]
 gi|315022600|gb|EFT35626.1| TPR-domain containing protein [Riemerella anatipestifer RA-YM]
 gi|325336890|gb|ADZ13164.1| Tetratricopeptide TPR-1 [Riemerella anatipestifer RA-GD]
          Length = 986

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 76/231 (32%), Gaps = 42/231 (18%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGE 118
           Y  A  + + +++  A  YF +  +      +  +S +     +  +    + +A    +
Sbjct: 471 YWLAQTYYQLEDYPSAISYFEKLQKT--EGSLDERSQINYDLGYAYFKNKDFGKAKECFK 528

Query: 119 EYITQYPESKNVDYVYYLVGMSYA---------------QMIRDVPYDQRA--------T 155
            Y+   P+++        +  ++                +   +    Q+A        T
Sbjct: 529 LYLK-NPKAEFKADAELRLADTHYADNELNDAIAIYNNAETSDEYTLFQKAMALGFKGDT 587

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           +  +  M ++V +Y NS Y   A                EIG  Y    E+  +   F  
Sbjct: 588 EAKISEMKKLVAQYPNSEYKDDAL--------------YEIGTAYAANDEFALSSEYFDK 633

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
           V+   +D      A   +V+  +      +A   +  + ++Y    +A  V
Sbjct: 634 VVKTSTDTHLVANAEIYMVQNDIEQNQEAKAFSGIKSLAKKYQNTVYADKV 684



 Score = 45.5 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 66/217 (30%), Gaps = 30/217 (13%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           TD   Q   Y        + N+ +A  YF +  +         K+    A   Y    Y 
Sbjct: 425 TDKIEQEVAYLLGTEEFNKGNYKEAELYFKKSLKFNHNQEFYLKAQYWLAQTYYQLEDYP 484

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            A S  E+             + Y +G +Y +         +      +     ++    
Sbjct: 485 SAISYFEKLQKTEGSLDERSQINYDLGYAYFKN--------KDFGKAKECFKLYLKN-PK 535

Query: 172 SPYVKGARFYVTVGRNQLAAKEVE--IGRYYLK-----------------RGEYVAAIPR 212
           + +   A   +       A  E+   I  Y                    +G+  A I  
Sbjct: 536 AEFKADAELRLADT--HYADNELNDAIAIYNNAETSDEYTLFQKAMALGFKGDTEAKISE 593

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
            + ++A Y ++E+ ++A+  +  AY A      + E 
Sbjct: 594 MKKLVAQYPNSEYKDDALYEIGTAYAANDEFALSSEY 630



 Score = 44.0 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 68/202 (33%), Gaps = 40/202 (19%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
             A     ++ + KA  Y+ +       +  A ++        Y +G   +A      ++
Sbjct: 723 STARQLYAKKQYEKAIPYYEKYLAQNVSSNTAFQAQYELGESYYQSGDDAKALKSFN-FV 781

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
           T YP     DY                   Q   +  ++    ++ +       + A  +
Sbjct: 782 TAYPN----DY-------------------QEEAR--IRSAQILLSK----NKGEEAAEH 812

Query: 182 VTVGRN-------QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA-EEAMARL 233
           +    +         A +E+   +YY  + ++  A     L+L+N  ++    E+A    
Sbjct: 813 LAKLVDSNNPKIKSFAQQELM--KYYADKKDFAKAETYAGLILSNTKNSPAVLEQAKVIK 870

Query: 234 VEAYVALALMDEAREVVSLIQE 255
             + +      EA++  + +++
Sbjct: 871 ARSLMNQGKDKEAQKSYTDLEK 892



 Score = 40.5 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 30/231 (12%), Positives = 73/231 (31%), Gaps = 33/231 (14%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
            +   +  +++KA+    + +         +    +P +     +L        +  ++ 
Sbjct: 566 AETSDEYTLFQKAMALGFKGDTEAKISEMKKLVAQYPNSEYKDDALYEIGTAYAANDEFA 625

Query: 112 QAASLGEEYITQYPESKNVDYV-YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
            ++   ++ +    ++  V     Y+V         D+  +Q A       +  + ++Y 
Sbjct: 626 LSSEYFDKVVKTSTDTHLVANAEIYMV-------QNDIEQNQEA--KAFSGIKSLAKKYQ 676

Query: 171 NSPYVKG--ARFYVTVGR-------NQLAAK-------------EVEIGRYYLKRGEYVA 208
           N+ Y     A       +          A                +   R    + +Y  
Sbjct: 677 NTVYADKVLAVARSLYLKTGDTAGYQNFAKNLGVGLDKSEIDEINLSTARQLYAKKQYEK 736

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           AIP ++  LA    +  A +A   L E+Y       +A +  + +   YP 
Sbjct: 737 AIPYYEKYLAQNVSSNTAFQAQYELGESYYQSGDDAKALKSFNFVTA-YPN 786



 Score = 39.7 bits (92), Expect = 0.40,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 85/240 (35%), Gaps = 40/240 (16%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVL-----FLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
             + +  LD+        E + +        +L +++F KA E  N+ + +   +    +
Sbjct: 84  NPNAEKGLDTFIANHPNTEHFAEGQAPLADFYLIKKDFPKALEILNKLNVNHLSSSEQTQ 143

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD--YVYYLVGMSYAQMIRDVPYDQR 153
             L   + ++ +G  + A    E     Y  S++ +   + Y++G  Y          + 
Sbjct: 144 HSLKLGYAKFMSGDSKAAIKDLE---NAYTSSEDSEKGDIAYMLGHLYYT--------EG 192

Query: 154 ATKLMLQYMSR--------------IVERYTNSP-YVKGARFYVTVGRNQLA---AKEVE 195
            T    +Y +                V+ Y N   Y         + +  L+     EV 
Sbjct: 193 QTGKAFEYFNEIKDKEKYSKIVKPYFVQMYFNDKNYDLAIAEGEMLLKENLSSSYKSEVH 252

Query: 196 --IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
             IG  Y  +GEY AA P  ++ L +  +A    + +  +      + L DEA    + +
Sbjct: 253 KIIGESYFMKGEYRAAYPHLKVFLDS-KEAPSESD-LYEMGFVAAQMGLYDEAVSYYNQL 310


>gi|156034555|ref|XP_001585696.1| hypothetical protein SS1G_13212 [Sclerotinia sclerotiorum 1980]
 gi|154698616|gb|EDN98354.1| hypothetical protein SS1G_13212 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 471

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/137 (12%), Positives = 40/137 (29%), Gaps = 23/137 (16%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
            +        ++ KA E + +        P    + ++          +  Y  A +   
Sbjct: 13  NEGNKAFAAHDWPKAIELYTKAIELDDQKP-TYYSNRAQ-----ANIKSEAYGYAIADAT 66

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           + I   P        YY   ++Y  +++         K  L+    +V++  N      A
Sbjct: 67  KAIELDPNFVK---AYYRRAVAYTAILKS--------KEALRDFKTVVKKAPNDK---DA 112

Query: 179 RFYVTVGRNQLAAKEVE 195
           +  +      +   E  
Sbjct: 113 KLKLAECEKIVKRIEFF 129


>gi|88800187|ref|ZP_01115755.1| hypothetical protein MED297_13857 [Reinekea sp. MED297]
 gi|88777033|gb|EAR08240.1| hypothetical protein MED297_13857 [Reinekea sp. MED297]
          Length = 248

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 54/154 (35%), Gaps = 9/154 (5%)

Query: 30  IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
           +A    V    +S  +    ++TD     E Y  A   + ++ F ++       ++  P 
Sbjct: 102 VANAPAVSSPSESLDESQQAAMTDEEILAE-YNAAKALMLDKKFDESISKLAIFAKKHPD 160

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
             +   +      +       ++A +  +  ++ Y E   V    Y +G+        + 
Sbjct: 161 HPLTPNAWYWIGEIYLVQRNNEEAQNAFQRIVSDYSEHDKVPDSLYKLGV--------IA 212

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
                T+    Y  R+++ Y N+   K A+  + 
Sbjct: 213 QQSSQTQQASAYFERVIQNYPNTQSAKLAKARLE 246



 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 48/139 (34%), Gaps = 22/139 (15%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +   +A       K+ ++ S    +  ++P+       +Y +G  Y          QR  
Sbjct: 130 AEYNAAKALMLDKKFDESISKLAIFAKKHPDHPLTPNAWYWIGEIY--------LVQRNN 181

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           +       RIV  Y+    V  + + + V   Q +  +                   F+ 
Sbjct: 182 EEAQNAFQRIVSDYSEHDKVPDSLYKLGVIAQQSSQTQQA--------------SAYFER 227

Query: 216 VLANYSDAEHAEEAMARLV 234
           V+ NY + + A+ A ARL 
Sbjct: 228 VIQNYPNTQSAKLAKARLE 246


>gi|295085535|emb|CBK67058.1| Uncharacterized protein conserved in bacteria [Bacteroides
           xylanisolvens XB1A]
          Length = 1005

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 34/80 (42%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                    +YEK   ++   N ++A   F +    +P + V+RK+      + Y  G Y
Sbjct: 614 PASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEIGLLYYQKGDY 673

Query: 111 QQAASLGEEYITQYPESKNV 130
            QA    ++ I +YP S+  
Sbjct: 674 NQAIEAYKQVIEKYPGSEEA 693



 Score = 54.4 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 72/214 (33%), Gaps = 28/214 (13%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           Y    +    +++++A  YF +     +      +A  +             +++A    
Sbjct: 513 YNLGYIAFHRKDYTQASNYFQKYIQLEKGENATALA-DAYNRIGDCHLHVRNFEEAKQYY 571

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
            +       S   DY +Y + +                   +  ++R+V +Y  SPY   
Sbjct: 572 SQAEQMNTSS--GDYSFYQLALVSGLQKDYTGK--------ITLLNRLVGKYPASPYAVN 621

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           A                E GR Y+       AI  F+ +L  Y ++  + +A A +   Y
Sbjct: 622 AI--------------YEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEIGLLY 667

Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
                 ++A E    + E+YP    AR     +K
Sbjct: 668 YQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLK 701



 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/267 (14%), Positives = 75/267 (28%), Gaps = 55/267 (20%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
           +C  +            D  T       +Y++     +E+N++ A        +  P A 
Sbjct: 9   ICAAICCTPIIGFAQTGDKFTST---DNLYKEGKELFQERNYAAALPALKAFVKQKPAAS 65

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA--------- 142
           + + +  M     Y      +   L  +Y+ +YP++   + +Y L+   Y          
Sbjct: 66  LLQDAEYMLVSSAYELKDKNR-IELLRKYLDRYPDTPYANRIYALLASCYFYEGKYDEAL 124

Query: 143 --------QMIRDVPYDQ------------RATKLMLQYMSRIVERYTNSPYVKGARFYV 182
                    ++ +   D                +    +   +        Y K   +Y+
Sbjct: 125 ALFNSADLDLLGNEERDDCTYQLATCYLKTDNLREAAIWFETLRANSP--KYAKDCDYYL 182

Query: 183 TVGRNQLAAKE--------------------VEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
           +  R                             I   Y +   Y  A    Q  L+ Y +
Sbjct: 183 SYIRYTQKRYSEALKGFLPLQDDSKYKALVPYYIAEIYTQLKNYDKAQIVAQNYLSAYPN 242

Query: 223 AEHAEEAMARLVEAYVALALMDEAREV 249
            EHA E    L +AY       +A E 
Sbjct: 243 NEHAAEMYRILGDAYYHFGQYHQAVEA 269



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 47/125 (37%), Gaps = 8/125 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A++   +++++      N+    +P +  A  ++              QA +  +E 
Sbjct: 587 YQLALVSGLQKDYTGKITLLNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKEL 646

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +T+YPES         +G+ Y Q               ++   +++E+Y  S   + A  
Sbjct: 647 LTKYPESPVSRKAAAEIGLLYYQK--------GDYNQAIEAYKQVIEKYPGSEEARLAMR 698

Query: 181 YVTVG 185
            +   
Sbjct: 699 DLKSI 703



 Score = 42.4 bits (99), Expect = 0.065,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 65/190 (34%), Gaps = 28/190 (14%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A  +LK  N  +A  +F     + P    A+      ++++Y+  +Y +A    + +
Sbjct: 145 YQLATCYLKTDNLREAAIWFETLRANSP--KYAKDCDYYLSYIRYTQKRYSEAL---KGF 199

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +    +SK    V Y +   Y Q+        +            +  Y N+ +      
Sbjct: 200 LPLQDDSKYKALVPYYIAEIYTQL--------KNYDKAQIVAQNYLSAYPNNEHAAEMYR 251

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
            +              G  Y   G+Y  A+  F   L     +    +A+  L  +Y   
Sbjct: 252 IL--------------GDAYYHFGQYHQAVEAFNNYLNK-DHSAPRRDALYMLGLSYYQT 296

Query: 241 ALMDEAREVV 250
            +  +A E +
Sbjct: 297 KVYSKAAETL 306



 Score = 42.4 bits (99), Expect = 0.072,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 77/220 (35%), Gaps = 36/220 (16%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A ++ + +N+ KA          +P    A +   +     Y  G+Y QA      Y
Sbjct: 214 YYIAEIYTQLKNYDKAQIVAQNYLSAYPNNEHAAEMYRILGDAYYHFGQYHQAVEAFNNY 273

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           + +   +   D   Y++G+SY Q         +      + + ++     N    + A  
Sbjct: 274 LNKDHSAPRRD-ALYMLGLSYYQT--------KVYSKAAETLGKVTTD--NDALTQNAYL 322

Query: 181 YVTVGRNQLAAK---------------EVEI---GRYYL-------KRGEYVAAIPRFQL 215
           ++ +   QLA K                ++I     Y             +  ++  F+ 
Sbjct: 323 HMGLSYLQLAEKNKARMAFEQAAASNTNMQIKEQAAYNYALCLHETSFSAFGESVTAFEK 382

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
            L  +  + +AE+  + LVE Y+     D A + +  I +
Sbjct: 383 FLNEFPTSPYAEKVSSYLVEVYMNTRSYDAALKSIDRIAK 422



 Score = 36.2 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 50/167 (29%), Gaps = 22/167 (13%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           + YL+       +  +Y   + + + + +SKA E   + + D     + + + L      
Sbjct: 271 NNYLNKDHSAPRRDALYMLGLSYYQTKVYSKAAETLGKVTTDN--DALTQNAYLHMGLSY 328

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
               +  +A    E+        +  +   Y   +   +          A    +    +
Sbjct: 329 LQLAEKNKARMAFEQAAASNTNMQIKEQAAYNYALCLHETSFS------AFGESVTAFEK 382

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
            +  +  SPY +    Y+                 Y+    Y AA+ 
Sbjct: 383 FLNEFPTSPYAEKVSSYLVEV--------------YMNTRSYDAALK 415


>gi|300937785|ref|ZP_07152582.1| tol-pal system protein YbgF [Escherichia coli MS 21-1]
 gi|300457196|gb|EFK20689.1| tol-pal system protein YbgF [Escherichia coli MS 21-1]
          Length = 263

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 49/156 (31%), Gaps = 9/156 (5%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89
           +           +      +          Y  A+  +++++    A   F    +++P 
Sbjct: 116 SGAAASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPD 175

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +     +      + Y+ GK   AA      +  YP+S       + VG+        + 
Sbjct: 176 STFLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGV--------IM 227

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            D+  T        +++ +Y  +   K A+  +   
Sbjct: 228 QDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM 263



 Score = 49.0 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I  YP+S  +    Y +G       +              Y + +V+ Y 
Sbjct: 160 DDAMVAFQNFIKNYPDSTFLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A F V V                  +G+   A   +Q V++ Y   + A++A 
Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257

Query: 231 ARL 233
            RL
Sbjct: 258 KRL 260



 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 43/131 (32%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      ++ Y +S ++  A +++               
Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTFLPNANYWLGQLN----------- 190

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
                +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 191 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 247

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 248 PGTDGAKQAQK 258


>gi|116075659|ref|ZP_01472918.1| TPR repeat [Synechococcus sp. RS9916]
 gi|116066974|gb|EAU72729.1| TPR repeat [Synechococcus sp. RS9916]
          Length = 734

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/247 (10%), Positives = 66/247 (26%), Gaps = 57/247 (23%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSR 85
             A+C + G   +  + +         Y    Y   +   ++ + + A   +N+      
Sbjct: 71  LAALCGMQGRFSELIKLLRRTLEIKPNYPEAHYNLGLALKEQGDLTAAIASYNKALQLRP 130

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
           ++P      ++           G    A +     +   P        +  +G+   +  
Sbjct: 131 NYP------EAHNNLGNAYKDQGDLTAAIASYNSALQLNPNDPET---HNNLGVVLKKQG 181

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
                D  A         ++   Y                    A   + I   + ++G+
Sbjct: 182 -----DPTAAITSYHQALQLQPNYPE------------------AHYNLGIA--FKEQGD 216

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA--LMDEAREVVSL--------IQE 255
             AAI  +   L    +            + Y  L   L ++     ++        ++ 
Sbjct: 217 LTAAIASYNKALQLKPND----------ADTYNNLGNALKEQGDLTAAIDSFNKALQLKP 266

Query: 256 RYPQGYW 262
            +P   W
Sbjct: 267 NFPDAQW 273


>gi|298480096|ref|ZP_06998295.1| TPR-domain containing protein [Bacteroides sp. D22]
 gi|298273905|gb|EFI15467.1| TPR-domain containing protein [Bacteroides sp. D22]
          Length = 1005

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 34/80 (42%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                    +YEK   ++   N ++A   F +    +P + V+RK+      + Y  G Y
Sbjct: 614 PASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEIGLLYYQKGDY 673

Query: 111 QQAASLGEEYITQYPESKNV 130
            QA    ++ I +YP S+  
Sbjct: 674 NQAIEAYKQVIEKYPGSEEA 693



 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 71/214 (33%), Gaps = 28/214 (13%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           Y    +    ++++ A  YF +     +      +A  +             +++A    
Sbjct: 513 YNLGYIAFHRKDYTLASNYFQKYIQLEKGENATALA-DAYNRIGDCHLHVRNFEEAKQYY 571

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
            +       S   DY +Y + +                   +  ++R+V +Y  SPY   
Sbjct: 572 SQAEQMNTSS--GDYSFYQLALVSGLQKDYTGK--------ITLLNRLVGKYPASPYAVN 621

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           A                E GR Y+       AI  F+ +L  Y ++  + +A A +   Y
Sbjct: 622 AI--------------YEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEIGLLY 667

Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
                 ++A E    + E+YP    AR     +K
Sbjct: 668 YQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLK 701



 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 81/251 (32%), Gaps = 20/251 (7%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
           +C  +            D  T       +Y++     +E+N++ A        +  P A 
Sbjct: 9   ICAAICCTPIIGFAQTGDKFTST---DNLYKEGKELFQEKNYAAALPALKAFVKQKPAAS 65

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA--------- 142
           + + +  M     Y      +   L  +Y+ +YP++   + +Y L+   Y          
Sbjct: 66  LLQDAEYMLVSSAYELRDKNR-IELLRKYLDRYPDTPYANRIYALLASCYFYEEKYDEAL 124

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
            +      D    +       ++   Y  +  ++ A  +    R        +   YYL 
Sbjct: 125 ALFNSADLDLLGNEERDDCTYQLATCYLKTDNLREAAIWFETLRANSPKYAKD-CDYYLS 183

Query: 203 RGEYVAAIPRFQLVLANY----SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
              Y     R+   L  +     D+++       + E YV L   D+A+ V       YP
Sbjct: 184 YIRYTQ--KRYSEALKGFLPLQDDSKYKALVPYYIAEIYVQLKNYDKAQIVAQNYLSAYP 241

Query: 259 QGYWARYVETL 269
              +A  +  +
Sbjct: 242 NNEYAAEMYRI 252



 Score = 49.0 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 47/125 (37%), Gaps = 8/125 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A++   +++++      N+    +P +  A  ++              QA +  +E 
Sbjct: 587 YQLALVSGLQKDYTGKITLLNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKEL 646

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +T+YPES         +G+ Y Q               ++   +++E+Y  S   + A  
Sbjct: 647 LTKYPESPVSRKAAAEIGLLYYQK--------GDYNQAIEAYKQVIEKYPGSEEARLAMR 698

Query: 181 YVTVG 185
            +   
Sbjct: 699 DLKSI 703



 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 66/190 (34%), Gaps = 28/190 (14%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A  +LK  N  +A  +F     + P    A+      ++++Y+  +Y +A    + +
Sbjct: 145 YQLATCYLKTDNLREAAIWFETLRANSP--KYAKDCDYYLSYIRYTQKRYSEAL---KGF 199

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +    +SK    V Y +   Y Q+        +            +  Y N+ Y     +
Sbjct: 200 LPLQDDSKYKALVPYYIAEIYVQL--------KNYDKAQIVAQNYLSAYPNNEYAAEM-Y 250

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
            +              G  Y   G+Y  A+  F   L     +    +A+  L  +Y   
Sbjct: 251 RIQ-------------GDVYYHFGQYHQAVEAFNNYLNK-DHSAPRRDALYMLGLSYYQT 296

Query: 241 ALMDEAREVV 250
            +  +A E +
Sbjct: 297 KVYSKAAETL 306



 Score = 35.9 bits (82), Expect = 5.8,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 50/167 (29%), Gaps = 22/167 (13%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           + YL+       +  +Y   + + + + +SKA E   + + D     + + + L      
Sbjct: 271 NNYLNKDHSAPRRDALYMLGLSYYQTKVYSKAAETLGKVTTDN--DALTQNAYLHMGLSY 328

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
               +  +A    E+        +  +   Y   +   +          A    +    +
Sbjct: 329 LQLAEKNKARMAFEQAAASNANMQIKEQAAYNYALCLHETSFS------AFGESVTAFEK 382

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
            +  +  SPY +    Y+                 Y+    Y AA+ 
Sbjct: 383 FLNEFPTSPYAEKVSSYLVEV--------------YMNTRSYDAALK 415


>gi|237717254|ref|ZP_04547735.1| TPR domain-containing protein [Bacteroides sp. D1]
 gi|262406021|ref|ZP_06082571.1| TPR domain-containing protein [Bacteroides sp. 2_1_22]
 gi|294806889|ref|ZP_06765714.1| tetratricopeptide repeat protein [Bacteroides xylanisolvens SD CC
           1b]
 gi|229443237|gb|EEO49028.1| TPR domain-containing protein [Bacteroides sp. D1]
 gi|262356896|gb|EEZ05986.1| TPR domain-containing protein [Bacteroides sp. 2_1_22]
 gi|294445918|gb|EFG14560.1| tetratricopeptide repeat protein [Bacteroides xylanisolvens SD CC
           1b]
          Length = 1005

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 34/80 (42%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                    +YEK   ++   N ++A   F +    +P + V+RK+      + Y  G Y
Sbjct: 614 PASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEIGLLYYQKGDY 673

Query: 111 QQAASLGEEYITQYPESKNV 130
            QA    ++ I +YP S+  
Sbjct: 674 NQAIEAYKQVIEKYPGSEEA 693



 Score = 54.4 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 72/214 (33%), Gaps = 28/214 (13%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           Y    +    +++++A  YF +     +      +A  +             +++A    
Sbjct: 513 YNLGYIAFHRKDYTQASNYFQKYIQLEKGENATALA-DAYNRIGDCHLHVRNFEEAKQYY 571

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
            +       S   DY +Y + +                   +  ++R+V +Y  SPY   
Sbjct: 572 SQAEQMNTSS--GDYSFYQLALVSGLQKDYTGK--------ITLLNRLVGKYPASPYAVN 621

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           A                E GR Y+       AI  F+ +L  Y ++  + +A A +   Y
Sbjct: 622 AI--------------YEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEIGLLY 667

Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
                 ++A E    + E+YP    AR     +K
Sbjct: 668 YQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLK 701



 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/267 (14%), Positives = 75/267 (28%), Gaps = 55/267 (20%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
           +C  +            D  T       +Y++     +E+N++ A        +  P A 
Sbjct: 9   ICAAICCTPIIGFAQTGDKFTST---DNLYKEGKELFQERNYAAALPALKAFVKQKPAAS 65

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA--------- 142
           + + +  M     Y      +   L  +Y+ +YP++   + +Y L+   Y          
Sbjct: 66  LLQDAEYMLVSSAYELKDKNR-IELLRKYLDRYPDTPYANRIYALLASCYFYEGKYDEAL 124

Query: 143 --------QMIRDVPYDQ------------RATKLMLQYMSRIVERYTNSPYVKGARFYV 182
                    ++ +   D                +    +   +        Y K   +Y+
Sbjct: 125 ALFNSADLDLLGNEERDDCTYQLATCYLKTDNLREAAIWFETLRANSP--KYAKDCDYYL 182

Query: 183 TVGRNQLAAKE--------------------VEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
           +  R                             I   Y +   Y  A    Q  L+ Y +
Sbjct: 183 SYIRYTQKRYSEALKGFLPLQDDSKYKALVPYYIAEIYTQLKNYDKAQIVAQNYLSAYPN 242

Query: 223 AEHAEEAMARLVEAYVALALMDEAREV 249
            EHA E    L +AY       +A E 
Sbjct: 243 NEHAAEMYRILGDAYYHFGQYHQAVEA 269



 Score = 49.0 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 47/125 (37%), Gaps = 8/125 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A++   +++++      N+    +P +  A  ++              QA +  +E 
Sbjct: 587 YQLALVSGLQKDYTGKITLLNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKEL 646

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +T+YPES         +G+ Y Q               ++   +++E+Y  S   + A  
Sbjct: 647 LTKYPESPVSRKAAAEIGLLYYQK--------GDYNQAIEAYKQVIEKYPGSEEARLAMR 698

Query: 181 YVTVG 185
            +   
Sbjct: 699 DLKSI 703



 Score = 43.2 bits (101), Expect = 0.038,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 77/220 (35%), Gaps = 36/220 (16%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A ++ + +N+ KA          +P    A +   +     Y  G+Y QA      Y
Sbjct: 214 YYIAEIYTQLKNYDKAQIVAQNYLSAYPNNEHAAEMYRILGDAYYHFGQYHQAVEAFNNY 273

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           + +   +   D   Y++G+SY Q         +      + + ++     N    + A  
Sbjct: 274 LNKDRSAPRRD-ALYMLGLSYYQT--------KVYSKAAETLGKVTTD--NDALTQNAYL 322

Query: 181 YVTVGRNQLAAK---------------EVEI---GRYYL-------KRGEYVAAIPRFQL 215
           ++ +   QLA K                ++I     Y             +  ++  F+ 
Sbjct: 323 HMGLSYLQLAEKNKARMAFEQAAASNANMQIKEQAAYNYALCLHETSFSAFGESVTAFEK 382

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
            L  +  + +AE+  + LVE Y+     D A + +  I +
Sbjct: 383 FLNEFPTSPYAEKVSSYLVEVYMNTRSYDAALKSIDRIAK 422



 Score = 42.8 bits (100), Expect = 0.052,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 65/190 (34%), Gaps = 28/190 (14%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A  +LK  N  +A  +F     + P    A+      ++++Y+  +Y +A    + +
Sbjct: 145 YQLATCYLKTDNLREAAIWFETLRANSP--KYAKDCDYYLSYIRYTQKRYSEAL---KGF 199

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +    +SK    V Y +   Y Q+        +            +  Y N+ +      
Sbjct: 200 LPLQDDSKYKALVPYYIAEIYTQL--------KNYDKAQIVAQNYLSAYPNNEHAAEMYR 251

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
            +              G  Y   G+Y  A+  F   L     +    +A+  L  +Y   
Sbjct: 252 IL--------------GDAYYHFGQYHQAVEAFNNYLNK-DRSAPRRDALYMLGLSYYQT 296

Query: 241 ALMDEAREVV 250
            +  +A E +
Sbjct: 297 KVYSKAAETL 306



 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 50/167 (29%), Gaps = 22/167 (13%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           + YL+       +  +Y   + + + + +SKA E   + + D     + + + L      
Sbjct: 271 NNYLNKDRSAPRRDALYMLGLSYYQTKVYSKAAETLGKVTTDN--DALTQNAYLHMGLSY 328

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
               +  +A    E+        +  +   Y   +   +          A    +    +
Sbjct: 329 LQLAEKNKARMAFEQAAASNANMQIKEQAAYNYALCLHETSFS------AFGESVTAFEK 382

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
            +  +  SPY +    Y+                 Y+    Y AA+ 
Sbjct: 383 FLNEFPTSPYAEKVSSYLVEV--------------YMNTRSYDAALK 415


>gi|182412289|ref|YP_001817355.1| hypothetical protein Oter_0465 [Opitutus terrae PB90-1]
 gi|177839503|gb|ACB73755.1| hypothetical protein Oter_0465 [Opitutus terrae PB90-1]
          Length = 446

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 79/195 (40%), Gaps = 17/195 (8%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCS--RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           +E A    +  ++++A +++++       P      ++   SA+    AG  + AA+   
Sbjct: 196 FEVAETHFQNGDYAEANKFYSRLRMLDLAP--EDRARAQFKSAYSLQLAGDNEGAANGLR 253

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            +I Q+P+ +NV    YL+  S    +R +   Q A    L  +    ER  +S   K  
Sbjct: 254 SFIEQWPDDENVPQARYLLASS----LRTLNRPQEALTATLDLLR--AERSRSSADSKRW 307

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
            ++     NQLA         + + G+ + A+  +  + A   D         ++ + Y 
Sbjct: 308 AYWQRRTGNQLANG-------FFQNGDILNALAIYHGLAALSDDPVWRIPVTYQIAQCYE 360

Query: 239 ALALMDEAREVVSLI 253
            L  +D A +   +I
Sbjct: 361 RLGDLDRATKTYRVI 375



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 63/219 (28%), Gaps = 51/219 (23%)

Query: 69  KEQNFSKA-YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
           +  +F  A   Y        P     + +LL  A +    G   +AA++ E ++  +P  
Sbjct: 83  ERGDFDAAEIAYRQVLDGKAPL-ETTQAALLGLAHMHRKQGALTKAAAIYERFLKDFPSD 141

Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE-------------------- 167
             V      +G +          D  A +L +     ++                     
Sbjct: 142 DRVPDALLELGRTL--------RDMGAPRLAISRFYNVINSTLKLPANHGFEHYQLLAKT 193

Query: 168 --------RYTNSPYVKGARFYVTVGRNQ-LAAKEVEIGRYYLKRGEYV--------AAI 210
                    + N  Y   A  + +  R   LA ++    ++   +  Y          A 
Sbjct: 194 AQFEVAETHFQNGDYA-EANKFYSRLRMLDLAPEDRARAQF---KSAYSLQLAGDNEGAA 249

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
              +  +  + D E+  +A   L  +   L    EA   
Sbjct: 250 NGLRSFIEQWPDDENVPQARYLLASSLRTLNRPQEALTA 288



 Score = 38.6 bits (89), Expect = 0.87,   Method: Composition-based stats.
 Identities = 18/143 (12%), Positives = 36/143 (25%), Gaps = 22/143 (15%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN-------QCSRDFPFAGV---ARKSLL 98
           D  +D R    + E             A   F        +   +  F      A+ +  
Sbjct: 137 DFPSDDRVPDALLELGRTLRDMGAPRLAISRFYNVINSTLKLPANHGFEHYQLLAKTAQF 196

Query: 99  MSAFVQYSAGKYQQAASLGEE--YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
             A   +  G Y +A         +   PE             +  +    +       +
Sbjct: 197 EVAETHFQNGDYAEANKFYSRLRMLDLAPED---------RARAQFKSAYSLQL-AGDNE 246

Query: 157 LMLQYMSRIVERYTNSPYVKGAR 179
                +   +E++ +   V  AR
Sbjct: 247 GAANGLRSFIEQWPDDENVPQAR 269


>gi|159900735|ref|YP_001546982.1| TPR repeat-containing protein [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159893774|gb|ABX06854.1| Tetratricopeptide TPR_2 repeat protein [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 1757

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/209 (20%), Positives = 77/209 (36%), Gaps = 26/209 (12%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           + +Y++A   L+     +A          FP+   A +          +     +A    
Sbjct: 7   QALYDEARSALETGKEERAIGASEHLLESFPYYLEAYRI---LGESYLNRQDLAKAVEAF 63

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           E  +   P  +N+  V+  +G++Y +        Q      ++   +  E   + P ++ 
Sbjct: 64  ERVLRSDP--ENIP-VHVGLGVTYER--------QGNLAAAIREFEQAFEIKPDLPELRS 112

Query: 178 ARFYV-------TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
               +          R  L  K+  +GR Y++   +  AI  F  VLA+  D +  + A+
Sbjct: 113 QVLRLYTEAWGSENARILL--KKAGLGRMYVRGRRFDKAIQEFNDVLAD--DPKRVDIAV 168

Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQ 259
           A L EA        EA EV S I   YP 
Sbjct: 169 A-LAEALWRNGQEAEAAEVASDILRDYPD 196


>gi|330444094|ref|YP_004377080.1| TPR domain-containing protein [Chlamydophila pecorum E58]
 gi|328807204|gb|AEB41377.1| TPR domain protein [Chlamydophila pecorum E58]
          Length = 329

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 64/183 (34%), Gaps = 37/183 (20%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
            +V           + +Y KA L + +++ ++A +   + +  FPF  ++ K+       
Sbjct: 169 DEVLTAFPNQDLGAQALYSKADLLIVKKDLAEAIKILKKLTLQFPFHSLSPKA------- 221

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
                           ++     S+            Y Q  +  P++ +   L      
Sbjct: 222 ----------------FVRL---SE-----------IYLQQAQKEPHNVQYLSLAKINEE 251

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
            +++++ N P  +     V     + AA     GR+Y K+ ++ AA   +Q  L +Y   
Sbjct: 252 AMLKQHPNHPLNQVVSANVLQMCERYAAGLYSTGRFYEKKKKHSAAKIYYQTALEHYPQT 311

Query: 224 EHA 226
              
Sbjct: 312 SLV 314



 Score = 39.7 bits (92), Expect = 0.47,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 76/224 (33%), Gaps = 38/224 (16%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
             T      E + +  +FL+ Q++ +A   F   S  FP   +  ++L  +    +  G+
Sbjct: 47  KFTPKYSAEEYFSQGQVFLERQHYRRALLCFGMISHHFPSHTLHSQALFFTGKCYFELGQ 106

Query: 110 YQQAASLGEEYITQYPESKNVDY------VYYLVGMSYAQ-------MIRDVPYDQRATK 156
              A      Y+ Q     + +Y      + Y +  S+A        ++   P    A +
Sbjct: 107 PDLADKAFAIYLQQ----PDAEYSEELFSIKYAIAESFAHGKRKHLFLLEGFPKLGNADE 162

Query: 157 LMLQYMSRIVERYTNSPYVKGA---RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
             L+    ++  + N      A   +  + + +  LA                  AI   
Sbjct: 163 DALRIYDEVLTAFPNQDLGAQALYSKADLLIVKKDLAE-----------------AIKIL 205

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAR-EVVSLIQER 256
           + +   +     + +A  RL E Y+  A  +    + +SL +  
Sbjct: 206 KKLTLQFPFHSLSPKAFVRLSEIYLQQAQKEPHNVQYLSLAKIN 249



 Score = 35.5 bits (81), Expect = 9.3,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 35/80 (43%), Gaps = 1/80 (1%)

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           A +    G+ +L+R  Y  A+  F ++  ++       +A+    + Y  L   D A + 
Sbjct: 54  AEEYFSQGQVFLERQHYRRALLCFGMISHHFPSHTLHSQALFFTGKCYFELGQPDLADKA 113

Query: 250 VSLIQERYPQGYWARYVETL 269
            ++  ++ P   ++  + ++
Sbjct: 114 FAIYLQQ-PDAEYSEELFSI 132


>gi|332298580|ref|YP_004440502.1| hypothetical protein Trebr_1953 [Treponema brennaborense DSM 12168]
 gi|332181683|gb|AEE17371.1| hypothetical protein Trebr_1953 [Treponema brennaborense DSM 12168]
          Length = 1046

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 57/162 (35%), Gaps = 22/162 (13%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A+L +K + + +A   F    R FP   +A  +        Y+A  Y+ AA     Y
Sbjct: 732 YRSALLLVKRKQYDEADALFADVERSFPTESLAEDASYRRGESYYTAEAYETAAGRFASY 791

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
              YP  K  D   Y     +A++              +     ++  +  S +  G+  
Sbjct: 792 RRTYPRGKYADAASYFGADCFARI--------GQPDQAILLYESLLSSFPASTFAYGSLS 843

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
            +                 Y ++GEY AA+   + VL  Y D
Sbjct: 844 ALIPL--------------YREKGEYAAALRCARAVLQRYGD 871



 Score = 40.9 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 55/195 (28%), Gaps = 26/195 (13%)

Query: 67  FLKEQNFSKAYEYFNQCSRDFPF----AGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
                 +  A  Y        P+    +         SA +     +Y +A +L  +   
Sbjct: 697 LFAAGVYDDAGAYEAALDLMKPYLSRQSPFGMNCRYRSALLLVKRKQYDEADALFADVER 756

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
            +P     +   Y  G SY            A +      +     Y    Y   A    
Sbjct: 757 SFPTESLAEDASYRRGESYYTA--------EAYETAAGRFASYRRTYPRGKYADAAS--- 805

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
                            + + G+   AI  ++ +L+++  +  A  +++ L+  Y     
Sbjct: 806 -----------YFGADCFARIGQPDQAILLYESLLSSFPASTFAYGSLSALIPLYREKGE 854

Query: 243 MDEAREVVSLIQERY 257
              A      + +RY
Sbjct: 855 YAAALRCARAVLQRY 869



 Score = 38.9 bits (90), Expect = 0.75,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 29/83 (34%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           DV     T+   +   Y +   +   + +  A   F    R +P    A  +    A   
Sbjct: 753 DVERSFPTESLAEDASYRRGESYYTAEAYETAAGRFASYRRTYPRGKYADAASYFGADCF 812

Query: 105 YSAGKYQQAASLGEEYITQYPES 127
              G+  QA  L E  ++ +P S
Sbjct: 813 ARIGQPDQAILLYESLLSSFPAS 835



 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 30/107 (28%), Gaps = 14/107 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                 + +   +      + A +                G  Y     Y  A  RF   
Sbjct: 746 EADALFADVERSFPTESLAEDASYRR--------------GESYYTAEAYETAAGRFASY 791

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
              Y   ++A+ A     + +  +   D+A  +   +   +P   +A
Sbjct: 792 RRTYPRGKYADAASYFGADCFARIGQPDQAILLYESLLSSFPASTFA 838


>gi|195953342|ref|YP_002121632.1| Tetratricopeptide TPR_2 repeat protein [Hydrogenobaculum sp.
           Y04AAS1]
 gi|195932954|gb|ACG57654.1| Tetratricopeptide TPR_2 repeat protein [Hydrogenobaculum sp.
           Y04AAS1]
          Length = 890

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 64/166 (38%), Gaps = 17/166 (10%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
             +A  +L   E   +R+V   +  + +Y   +Y   + +  + ++  A  YF +     
Sbjct: 504 ILLAKAYLSIDEPAKAREVLKPTTAEAKY---LY--GLSYFIQDDYQDAIRYFKEIVSSK 558

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
            F     ++LL      Y+ G   +A    ++ +  YP SK      Y +  S       
Sbjct: 559 RFGA---RALLKLGDAYYNLGDINKAIYYYQKVVENYPNSKEAMEASYDIISS------- 608

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
               +  +K +   + + +ERY N+P  +  ++ +     +   KE
Sbjct: 609 --RIKNPSKNLEVAIKQFIERYKNNPLSEDLKYQLANIYIKQGKKE 652



 Score = 45.5 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 58/176 (32%), Gaps = 42/176 (23%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +A+++    ++                +    + LL  A    S  +  +A  + +  
Sbjct: 475 YYRAIVYFNMGDYKDVIRLLENP------STYDERILL--AKAYLSIDEPAKAREVLK-- 524

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
                         YL G+SY          Q   +  ++Y   IV           +  
Sbjct: 525 -------PTTAEAKYLYGLSYF--------IQDDYQDAIRYFKEIV-----------SSK 558

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                    A   +++G  Y   G+   AI  +Q V+ NY +++ A EA   ++ +
Sbjct: 559 RFG------ARALLKLGDAYYNLGDINKAIYYYQKVVENYPNSKEAMEASYDIISS 608



 Score = 39.7 bits (92), Expect = 0.40,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 65/233 (27%), Gaps = 77/233 (33%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDF---------------------PFAGVARKSLLM 99
           Y +   + K  ++ KA  YF      +                     P +    + LL 
Sbjct: 452 YYEGWYYFKLGDYQKALTYFT---SRYYRAIVYFNMGDYKDVIRLLENP-STYDERILL- 506

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR------------- 146
            A    S  +  +A  + +                YL G+SY                  
Sbjct: 507 -AKAYLSIDEPAKAREVLK---------PTTAEAKYLYGLSYFIQDDYQDAIRYFKEIVS 556

Query: 147 -------------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
                        D  Y+       + Y  ++VE Y NS     A + +   R +  +K 
Sbjct: 557 SKRFGARALLKLGDAYYNLGDINKAIYYYQKVVENYPNSKEAMEASYDIISSRIKNPSKN 616

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
           +E+                 +  +  Y +   +E+   +L   Y+     ++A
Sbjct: 617 LEVA---------------IKQFIERYKNNPLSEDLKYQLANIYIKQGKKEKA 654



 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 3/62 (4%)

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           Y  + +Y  AI  F+ ++++         A+ +L +AY  L  +++A      + E YP 
Sbjct: 538 YFIQDDYQDAIRYFKEIVSS---KRFGARALLKLGDAYYNLGDINKAIYYYQKVVENYPN 594

Query: 260 GY 261
             
Sbjct: 595 SK 596


>gi|327540469|gb|EGF27054.1| hypothetical protein RBWH47_05644 [Rhodopirellula baltica WH47]
          Length = 385

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 85/223 (38%), Gaps = 21/223 (9%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           +  D  ++  +++ +   L  +    A    +Q   D P   +A  + + +A      G 
Sbjct: 151 ATQDDWFKFNLFDASRPRLDAE--GHAVRVLDQIRYDNPTGRLADDATMAAAVEYMRQGD 208

Query: 110 YQQAASLGEEYIT----QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
           ++      +E++T     +PES +    + +      ++     Y     +   + + + 
Sbjct: 209 FE----TADEFLTDLRETFPESDHFFNAHLMGIRCKLEVFAGPKYSGLMLEEADKLVRQT 264

Query: 166 VERYTN-------SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
            ER+ +       S  V  A   V   R   A K  +   Y  KR EY AA   +Q++L 
Sbjct: 265 RERFPDRLRDPETSEMVARAAAEVAYRR---AEKLNDRAIYREKRSEYGAARLHYQMILR 321

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +Y     A+ A  RL EA  +   +   R   +L++  +P   
Sbjct: 322 DYPSTPFADRARQRL-EAITSYPDVPAERVSATLLKRIFPDSR 363



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 43/103 (41%), Gaps = 19/103 (18%)

Query: 50  SVTDVRYQREVYEKAVLFL-------------------KEQNFSKAYEYFNQCSRDFPFA 90
              +    R++Y++A                       ++++F++A + F + +   P  
Sbjct: 32  EQPNAERARDLYQEADQLFRGAASRFNQTERDGEAEGTEKKDFARAAKLFARAADAQPGT 91

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
            +A+ ++ M A   + + +   AA + E    ++P +++VD  
Sbjct: 92  ALAQDAMFMQAESLFFSDQLPDAADVYERLNKEFPNNRHVDQA 134


>gi|269139916|ref|YP_003296617.1| hypothetical protein ETAE_2571 [Edwardsiella tarda EIB202]
 gi|267985577|gb|ACY85406.1| hypothetical protein ETAE_2571 [Edwardsiella tarda EIB202]
 gi|304559751|gb|ADM42415.1| TPR repeat containing exported protein [Edwardsiella tarda FL6-60]
          Length = 221

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 9/123 (7%)

Query: 61  YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y +AV   L ++   +A   F    + +P +     +      + YS GK   AA     
Sbjct: 106 YNRAVDLVLVKKQNDQAISAFQTFIKQYPDSTYQPNANYWLGQLFYSKGKKDDAAYYYAV 165

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       Y VG+        +  ++  T        +++++Y NS   K A+
Sbjct: 166 VVKNYPKSPKAAESMYKVGV--------IMQEKGQTDKANAVYQQVIKQYPNSDAAKLAQ 217

Query: 180 FYV 182
             +
Sbjct: 218 KRM 220



 Score = 54.0 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 48/131 (36%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +      D+   ++     +      +++Y +S Y   A +++               
Sbjct: 102 ANADYNRAVDLVLVKKQNDQAISAFQTFIKQYPDSTYQPNANYWLGQL------------ 149

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
            +Y K  +  AA   + +V+ NY  +  A E+M ++          D+A  V   + ++Y
Sbjct: 150 -FYSKGKKDDAA-YYYAVVVKNYPKSPKAAESMYKVGVIMQEKGQTDKANAVYQQVIKQY 207

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 208 PNSDAAKLAQK 218


>gi|313157937|gb|EFR57343.1| tetratricopeptide repeat protein [Alistipes sp. HGB5]
          Length = 994

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 74/214 (34%), Gaps = 26/214 (12%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKY 110
           ++  Y   +Y          + ++A   F +    +P        +      ++YS  ++
Sbjct: 498 SEKEYAMALYNLGYCAFSRMDMAQARGSFEKFLAVYPARDRYRADACNRLGDIRYSDREF 557

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           + A +  +             Y  Y   ++   + R        T+   Q + +I+    
Sbjct: 558 EAAVAEYDRAAAL--GGPEKYYAQYKRAVTLGILGR--------TEQKQQALRQIIAA-G 606

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
              Y   A +   +GR+ +A              +Y     + +  +A+Y  +    +A+
Sbjct: 607 EGDYADEASY--ELGRSHIAQ------------EQYAEGAAQLEKFVADYPSSPRRAQAL 652

Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
           + L  AY+ L   +++     ++ E  PQ   A+
Sbjct: 653 SDLGLAYLNLGDKEKSLRYYDMVVETAPQSSEAK 686



 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 62/192 (32%), Gaps = 38/192 (19%)

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
              A ++         +  +Y + A+  E+++  YP S         +G++Y  +     
Sbjct: 608 GDYADEASYELGRSHIAQEQYAEGAAQLEKFVADYPSSPRRAQALSDLGLAYLNL----- 662

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG------------------------ 185
                 +  L+Y   +VE    S   KGA   +                           
Sbjct: 663 ---GDKEKSLRYYDMVVETAPQSSEAKGAMEGIREIYVSEGRVDDYFDYAQKAGLESDLT 719

Query: 186 ---RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
              R+ L+       +     G+  AA    +  + +Y    +  +A+  L + Y+    
Sbjct: 720 AVSRDSLS---FASAQKLYLAGQTDAAAKSLRSYVKSYPKGYYVNDALYFLSDCYLRSDQ 776

Query: 243 MDEAREVVSLIQ 254
            D+A E ++ + 
Sbjct: 777 RDDAIETLTTLA 788



 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 9/60 (15%), Positives = 20/60 (33%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y K    L    F+ A     +    +P +    ++  +     Y++  Y  A    + +
Sbjct: 357 YGKLQYELGGGAFNGAINVLTRYVEQYPSSPRVGEARTLLIAAYYNSNDYDAAYRAIKSF 416


>gi|163854238|ref|YP_001642281.1| tol-pal system protein YbgF [Methylobacterium extorquens PA1]
 gi|163665843|gb|ABY33210.1| tol-pal system protein YbgF [Methylobacterium extorquens PA1]
          Length = 341

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 34/88 (38%), Gaps = 8/88 (9%)

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           ++   +A+      +Y+QA     ++I  +P  + V    Y +G SY Q  R        
Sbjct: 216 QADFEAAYALIRERQYEQAEMSLRQFIQSHPRDRLVPKATYWLGESYLQRSRS------- 268

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYV 182
            +   +   ++   Y NSP    A   +
Sbjct: 269 -REAAEQFLKVSTDYANSPVAPEAMLKL 295



 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 44/107 (41%), Gaps = 14/107 (13%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           R  +     + + ++ +     V  A +++              G  YL+R     A  +
Sbjct: 229 RQYEQAEMSLRQFIQSHPRDRLVPKATYWL--------------GESYLQRSRSREAAEQ 274

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           F  V  +Y+++  A EAM +L  +  AL    +A   ++ ++ ++P 
Sbjct: 275 FLKVSTDYANSPVAPEAMLKLGTSLHALGAKAQACATLAEVERKFPS 321



 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 40/108 (37%), Gaps = 13/108 (12%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
             D    +  Y     +L+     +A E F + S D+  + VA +++L      ++ G  
Sbjct: 246 PRDRLVPKATYWLGESYLQRSRSREAAEQFLKVSTDYANSPVAPEAMLKLGTSLHALGAK 305

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
            QA +   E   ++P              + A + + V  +Q+  +  
Sbjct: 306 AQACATLAEVERKFPS-------------ANAIVRQGVEREQKRARCA 340


>gi|332286924|ref|YP_004418835.1| exported protein [Pusillimonas sp. T7-7]
 gi|330430877|gb|AEC22211.1| exported protein [Pusillimonas sp. T7-7]
          Length = 227

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/146 (13%), Positives = 54/146 (36%), Gaps = 10/146 (6%)

Query: 42  SSRDVYLDSVTDVRYQRE--VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
           +S+D    +   V   +E   YE  +   +   + +A   F+   + +P + +A ++   
Sbjct: 90  ASQDQTGGNTPQVADPQEQAAYEGPMGLFRSGKYKEAAASFDDFLQAYPNSQLAPEARFY 149

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
               +Y++  ++ +    +  I   P+         ++  S  ++               
Sbjct: 150 QGSSRYASKDFKGSIQGLQAMIEASPQDPRAPDALLVIAASQIELGNMAG--------AK 201

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVG 185
             + +IV+ Y N+   + A+  + + 
Sbjct: 202 SSLQKIVKDYPNTSAAETAKSRLKLL 227



 Score = 45.9 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/121 (15%), Positives = 38/121 (31%), Gaps = 24/121 (19%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY-----LKRGEYVAAI 210
           K         ++ Y NS     A                   R+Y         ++  +I
Sbjct: 124 KEAAASFDDFLQAYPNSQLAPEA-------------------RFYQGSSRYASKDFKGSI 164

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
              Q ++        A +A+  +  + + L  M  A+  +  I + YP    A   ++ +
Sbjct: 165 QGLQAMIEASPQDPRAPDALLVIAASQIELGNMAGAKSSLQKIVKDYPNTSAAETAKSRL 224

Query: 271 K 271
           K
Sbjct: 225 K 225


>gi|149915622|ref|ZP_01904148.1| hypothetical protein RAZWK3B_06692 [Roseobacter sp. AzwK-3b]
 gi|149810514|gb|EDM70357.1| hypothetical protein RAZWK3B_06692 [Roseobacter sp. AzwK-3b]
          Length = 282

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/155 (10%), Positives = 49/155 (31%), Gaps = 10/155 (6%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
           S +         Q S     ++      +   +++A   L     + A E F    + +P
Sbjct: 131 SASGASGAALSAQPSEGGEPEAPQLAVSEEADFKRAKEALDAGEHAAAAEQFATFQQTYP 190

Query: 89  FAGVARKSLLMSAFVQYSAGK-YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
              +  ++ L+      + G+  + A +  + + +            + +G +   +   
Sbjct: 191 GGPLTARAGLLRGQALEAGGQMKEAARAYLDTFSSDN-NGPEAAEALFRLGSALGAL--- 246

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
                  T+     ++ +  R+     V  A+  +
Sbjct: 247 -----GQTEQACVTLAEVGNRFPGDSAVGQAQAAM 276



 Score = 35.5 bits (81), Expect = 9.3,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 35/117 (29%), Gaps = 28/117 (23%)

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
            D        +  +   + Y   P    A                      L RG+ + A
Sbjct: 170 LDAGEHAAAAEQFATFQQTYPGGPLTARAG---------------------LLRGQALEA 208

Query: 210 IPRFQLVLANYSDA-------EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
             + +     Y D          A EA+ RL  A  AL   ++A   ++ +  R+P 
Sbjct: 209 GGQMKEAARAYLDTFSSDNNGPEAAEALFRLGSALGALGQTEQACVTLAEVGNRFPG 265


>gi|312375603|gb|EFR22941.1| hypothetical protein AND_13952 [Anopheles darlingi]
          Length = 511

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 52/156 (33%), Gaps = 22/156 (14%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG-VARKSLLMSAFV 103
           +         +   E+  +   F KEQN+ KA E + +     P     A +S     F 
Sbjct: 21  NESAPENPLQKKADELGARGNDFFKEQNYEKAIELYTEAIEVCPNERFYANRS-----FA 75

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
            +    Y  A +  ++ I      KN  Y   YY    +   + R         K  L  
Sbjct: 76  HFRTEAYGYALADADKAIAL----KNS-YTKAYYRRAAAMMALGR--------FKKALAD 122

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLA-AKEVEI 196
           +  + +R  +S   +          N++A  K + +
Sbjct: 123 LEFVAKRCPSSKDAQDKYSECKKMVNKIAFEKAIAV 158


>gi|260885435|ref|ZP_05735039.2| putative TPR domain protein [Prevotella tannerae ATCC 51259]
 gi|260852363|gb|EEX72232.1| putative TPR domain protein [Prevotella tannerae ATCC 51259]
          Length = 1257

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 74/206 (35%), Gaps = 33/206 (16%)

Query: 85  RDFPFAGVARKSL-LMSAFVQYSAG--------KYQQAASLGEEYITQYPESKNVDYVYY 135
           +  PF   A+++  L+     Y+AG         +  AA   E  +  YP+   +   YY
Sbjct: 586 KQLPFTEEAKEASNLILQNALYNAGVIEKDDLTDFPLAARTLERLVRHYPKFDRLQDAYY 645

Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP---------YVKGARFYVTVGR 186
            + + Y +  + +           QY   +VE + +S          Y+  A+F V    
Sbjct: 646 QLYLLYMRWQKPL--------EAEQYKRLLVEHFPDSAISKRLQDPNYLHDAQFAVQF-- 695

Query: 187 NQLAAKEVEIGRYY-LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
                  +    Y   ++G++      F+     Y D  + ++ +       +       
Sbjct: 696 ----EDSLYAATYNAYRKGDFATVGANFERSTQKYPDGANRDKFLFVQALTRLNRGEYKS 751

Query: 246 AREVVSLIQERYPQGYWARYVETLVK 271
           A + +S + ++YP+       E +VK
Sbjct: 752 AEDALSTLVKQYPKSELQPMAEQIVK 777


>gi|242280445|ref|YP_002992574.1| hypothetical protein Desal_2983 [Desulfovibrio salexigens DSM 2638]
 gi|242123339|gb|ACS81035.1| Tetratricopeptide domain protein [Desulfovibrio salexigens DSM
           2638]
          Length = 1117

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 41/109 (37%), Gaps = 19/109 (17%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
               Y + +  +Y N P +                     G YYL   EY  A  +FQ +
Sbjct: 563 EAKAYFNLLKSQYPNDPNIPYIS--------------YYWGEYYLGMKEYEKAADQFQYL 608

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
           +  Y D++   +A   L ++  AL   ++A +++      Y    W R+
Sbjct: 609 VQMYPDSKIVRDAALGLAKSLDALGYDEQAFQII-----DYIDKRWPRF 652



 Score = 52.8 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 62/178 (34%), Gaps = 32/178 (17%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
             G   +A +      +QYP   N+ Y+ Y  G  Y  M        +  +        +
Sbjct: 557 KVGNMPEAKAYFNLLKSQYPNDPNIPYISYYWGEYYLGM--------KEYEKAADQFQYL 608

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKE--VEIGRYYLKR--GEYV--------AAI--P 211
           V+ Y +S  V+ A   +    + L   E   +I  Y  KR    Y+        +A    
Sbjct: 609 VQMYPDSKIVRDAALGLAKSLDALGYDEQAFQIIDYIDKRWPRFYIEDLNFLLMSANTQN 668

Query: 212 RF---QLVLANY-------SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           R    +    NY        +A  A+  +AR+ + Y+       A+E+     + +P 
Sbjct: 669 RLGKIEQARENYWAYYNLAPEAPEADIVLARIGDIYLKTGQKTAAKEIYEKAAKDFPD 726



 Score = 41.3 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 62/176 (35%), Gaps = 23/176 (13%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y     +L  + + KA + F    + +P + + R + L  A    + G  +QA  + + Y
Sbjct: 586 YYWGEYYLGMKEYEKAADQFQYLVQMYPDSKIVRDAALGLAKSLDALGYDEQAFQIID-Y 644

Query: 121 I-TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           I  ++P        +Y+  +++  M  +        +   +           +P      
Sbjct: 645 IDKRWPR-------FYIEDLNFLLMSANTQNRLGKIEQARENYWAYYNLAPEAPEADIVL 697

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
                           IG  YLK G+  AA   ++    ++ D E    +M RL E
Sbjct: 698 AR--------------IGDIYLKTGQKTAAKEIYEKAAKDFPDKEGGLVSMMRLAE 739



 Score = 40.9 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 19/50 (38%)

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
           + +      FP + +A  + L      Y   KY       + ++ +YP S
Sbjct: 765 KIYTHIIEKFPDSPLAPLAQLKLGMWYYWNKKYGDCLGAVQGFLDKYPRS 814


>gi|295132712|ref|YP_003583388.1| tetratricopeptide repeat protein [Zunongwangia profunda SM-A87]
 gi|294980727|gb|ADF51192.1| tetratricopeptide repeat protein [Zunongwangia profunda SM-A87]
          Length = 1007

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 87/229 (37%), Gaps = 46/229 (20%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
              +YE    ++   N S+A   +++  R+ P + +  K++L    + Y++ + ++A S 
Sbjct: 611 DDALYELGNTYVATNNTSQAISTYDRLIREVPGSALVPKAMLRQGLIYYNSNQGEKALSK 670

Query: 117 GEEYITQYPESKNV------------------DYVYYLVGMSYAQMIRDVPYDQR----- 153
            ++ +  YP +                     +Y  ++  + + + + D   D       
Sbjct: 671 FKKVVNDYPNTPEAMEAVSTARNVYVDLGRTDEYAGWVKNIDFVE-VSDADLDNTTYEAA 729

Query: 154 -------ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
                   T        + ++ + N  +   A FY+   + +   KE  +  Y       
Sbjct: 730 ENQYLANNTSQAKSNFEKYLKSFPNGIHAINANFYLAQLQYRDGDKEGSVPHY------- 782

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
                  + V+A   + E  E+A+ARL + Y+  +   EA  ++  +++
Sbjct: 783 -------KYVIAK-PNNEFTEQALARLSQIYLEKSQYQEALPLLQRLEQ 823



 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 32/102 (31%), Gaps = 8/102 (7%)

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            E  +  +  +P +     +L        +     QA S  +  I + P S  V      
Sbjct: 594 IEDLSGFNSKYPRSAFRDDALYELGNTYVATNNTSQAISTYDRLIREVPGSALVPKAMLR 653

Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            G+ Y    +         +  L    ++V  Y N+P    A
Sbjct: 654 QGLIYYNSNQG--------EKALSKFKKVVNDYPNTPEAMEA 687



 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 52/187 (27%), Gaps = 33/187 (17%)

Query: 64  AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
              +   + + +A  Y  +     R +      +       +  Y  G Y  A S   + 
Sbjct: 251 GESYFNLKQYDQAIPYLKEYQGVRRKWNNTDYYQ-----LGYAYYKQGDYANAISEFNKI 305

Query: 121 ITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           I        +    YY +  SY +  +         +  L       E   ++   + A 
Sbjct: 306 ID---GKNAIAQNAYYHLAQSYLESGQK--------QQALNAFKNASEMDFDAKIKEDAM 354

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                        E+           Y +        L  Y ++ +  EA   L+ +++ 
Sbjct: 355 LNYAKL-----GYEIG--------NSYESPSKVLITFLETYPNSPNKAEAEELLINSFIT 401

Query: 240 LALMDEA 246
               +EA
Sbjct: 402 SGNFEEA 408



 Score = 42.8 bits (100), Expect = 0.052,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 51/213 (23%), Gaps = 81/213 (38%)

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESK------------------------------ 128
              +  +   +Y +A    + Y     +                                
Sbjct: 506 NIGYAYFKKNEYDRAIEYFKRYAE-NSQHDAAKRNDAYLRLGDSYFVNSQYWPAMESYNA 564

Query: 129 -------NVDYVYYLVGMSY-----------------AQMIRDVPYDQ------------ 152
                  N DY  +   +SY                 ++  R    D             
Sbjct: 565 AIANGVGNADYAAFQKAISYGFVDRNERKIEDLSGFNSKYPRSAFRDDALYELGNTYVAT 624

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
             T   +    R++     S  V  A     +               Y    +   A+ +
Sbjct: 625 NNTSQAISTYDRLIREVPGSALVPKAMLRQGLI--------------YYNSNQGEKALSK 670

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
           F+ V+ +Y +   A EA++     YV L   DE
Sbjct: 671 FKKVVNDYPNTPEAMEAVSTARNVYVDLGRTDE 703



 Score = 35.5 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 76/245 (31%), Gaps = 62/245 (25%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQC--SRDF-----------------------------PF 89
           Y    +  +  ++ +A +YF++      +                             P 
Sbjct: 178 YYIGYMAYESDDYDQANQYFDEVKGDERYGKELSYYQADMNFKLGNFEKAIQLGKEQLPK 237

Query: 90  AGVARKSLLMSA--FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
           + V  KS L        ++  +Y QA    +EY     +  N DY  Y +G +Y +    
Sbjct: 238 SNVVEKSQLNKIIGESYFNLKQYDQAIPYLKEYQGVRRKWNNTDY--YQLGYAYYK---- 291

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE-VEIGRYYLKRGEY 206
               Q      +   +                  +  G+N +A      + + YL+ G+ 
Sbjct: 292 ----QGDYANAISEFN-----------------KIIDGKNAIAQNAYYHLAQSYLESGQK 330

Query: 207 VAAIPRFQLVLANYSDAEHAEEA-MARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
             A+  F+       DA+  E+A +      Y      +   +V+    E YP       
Sbjct: 331 QQALNAFKNASEMDFDAKIKEDAMLNYAKLGYEIGNSYESPSKVLITFLETYPNSPNKAE 390

Query: 266 VETLV 270
            E L+
Sbjct: 391 AEELL 395


>gi|255262111|ref|ZP_05341453.1| tetratricopeptide TPR_2 repeat protein [Thalassiobium sp. R2A62]
 gi|255104446|gb|EET47120.1| tetratricopeptide TPR_2 repeat protein [Thalassiobium sp. R2A62]
          Length = 273

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 54/164 (32%), Gaps = 10/164 (6%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           +L+   S+      G    ++     D       ++  +E+A   L   +F  A + F  
Sbjct: 116 SLSDTSSLGGVDAQGTAPVATPIPSTDGPALAIGEQADFERAQWALASGDFRSAADQFAA 175

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGK-YQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
             + +P   +  +S L         G+    A +  E + +  P         + +G + 
Sbjct: 176 FVQTYPGGPLTAQSHLKRGEALEQLGETTDAARAFLEAF-SANPSGDVAPRALFKLGANL 234

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
             + + V             ++ +  R+ ++P V  A   +   
Sbjct: 235 GALGQTVD--------ACTTLAEVGVRFPSAPAVHEANAAMRKL 270


>gi|119896706|ref|YP_931919.1| hypothetical protein azo0415 [Azoarcus sp. BH72]
 gi|119669119|emb|CAL93032.1| conserved hypothetical secreted protein [Azoarcus sp. BH72]
          Length = 239

 Score = 54.4 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 41/122 (33%), Gaps = 8/122 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YE A+  LK      A   F       P    A  +   +      A +   A +     
Sbjct: 123 YEAALNLLKGGKHRDALTAFEAFLARHPAGSFAPSAHFWAGNAALQAKEVASATTHFNAV 182

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           + ++P          ++G++ +Q            K   + +  +VERY +S   + A+ 
Sbjct: 183 LGKWPNDSVAPDA--MLGLANSQQA------MGDAKTAQRTLQSLVERYPSSNAAQAAKQ 234

Query: 181 YV 182
            +
Sbjct: 235 RL 236



 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 37/106 (34%), Gaps = 14/106 (13%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           +  L      + R+    +   A  +   G   L AKEV             +A   F  
Sbjct: 136 RDALTAFEAFLARHPAGSFAPSA--HFWAGNAALQAKEVA------------SATTHFNA 181

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           VL  + +   A +AM  L  +  A+     A+  +  + ERYP   
Sbjct: 182 VLGKWPNDSVAPDAMLGLANSQQAMGDAKTAQRTLQSLVERYPSSN 227


>gi|218533184|ref|YP_002424000.1| tol-pal system protein YbgF [Methylobacterium chloromethanicum CM4]
 gi|218525487|gb|ACK86072.1| tol-pal system protein YbgF [Methylobacterium chloromethanicum CM4]
          Length = 341

 Score = 54.4 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 34/88 (38%), Gaps = 8/88 (9%)

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           ++   +A+      +Y+QA     ++I  +P  + V    Y +G SY Q  R        
Sbjct: 216 QADFEAAYALIRERQYEQAEMSLRQFIQSHPRDRLVPKATYWLGESYLQRSRS------- 268

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYV 182
            +   +   ++   Y NSP    A   +
Sbjct: 269 -REAAEQFLKVSTDYANSPVAPEAMLKL 295



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 44/107 (41%), Gaps = 14/107 (13%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           R  +     + + ++ +     V  A +++              G  YL+R     A  +
Sbjct: 229 RQYEQAEMSLRQFIQSHPRDRLVPKATYWL--------------GESYLQRSRSREAAEQ 274

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           F  V  +Y+++  A EAM +L  +  AL    +A   ++ ++ ++P 
Sbjct: 275 FLKVSTDYANSPVAPEAMLKLGTSLHALGAKAQACATLAEVERKFPS 321



 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 31/75 (41%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
             D    +  Y     +L+     +A E F + S D+  + VA +++L      ++ G  
Sbjct: 246 PRDRLVPKATYWLGESYLQRSRSREAAEQFLKVSTDYANSPVAPEAMLKLGTSLHALGAK 305

Query: 111 QQAASLGEEYITQYP 125
            QA +   E   ++P
Sbjct: 306 AQACATLAEVERKFP 320


>gi|320106747|ref|YP_004182337.1| Lytic transglycosylase [Terriglobus saanensis SP1PR4]
 gi|319925268|gb|ADV82343.1| Lytic transglycosylase catalytic [Terriglobus saanensis SP1PR4]
          Length = 793

 Score = 54.4 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 52/135 (38%), Gaps = 7/135 (5%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                 +  +Y    + L + + S A  +++Q   +FP +  A  +   +A++ Y   +Y
Sbjct: 403 PHSRWTEEALYSGGNMHLLQHDASNAIWHYSQLYTNFPNSVYAPSAHWRTAWMNYRLRRY 462

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
            +AA L EE I +YP+S       +          R     ++     + +   + E Y 
Sbjct: 463 PEAARLMEEQIARYPQSTEASAALFWRA-------RLYEDPEKNFSQAVNFYQVLSEVYR 515

Query: 171 NSPYVKGARFYVTVG 185
           N  Y   AR  +   
Sbjct: 516 NYYYGVMARVRLRAL 530



 Score = 41.3 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 39/148 (26%), Gaps = 8/148 (5%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
           AVC L            L    D     ++Y  A +   E++              FP +
Sbjct: 346 AVCDLKLKHLSRRDVERLPDTNDDSAALKLYLTAEISRNEKDIQAQRNAMQAMIERFPHS 405

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
               ++L     +         A     +  T +P S      ++       ++ R    
Sbjct: 406 RWTEEALYSGGNMHLLQHDASNAIWHYSQLYTNFPNSVYAPSAHWRTAWMNYRLRRYP-- 463

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGA 178
                    + M   + RY  S     A
Sbjct: 464 ------EAARLMEEQIARYPQSTEASAA 485


>gi|320354280|ref|YP_004195619.1| tol-pal system protein YbgF [Desulfobulbus propionicus DSM 2032]
 gi|320122782|gb|ADW18328.1| tol-pal system protein YbgF [Desulfobulbus propionicus DSM 2032]
          Length = 377

 Score = 54.4 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 45/125 (36%), Gaps = 8/125 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           + + +   K +N+ +AY+ F Q     P    A KSL       Y+ G+Y  A    ++ 
Sbjct: 261 FSQGMNQYKGKNYKEAYKSFEQSLSTNPNGSQAAKSLYYMGESLYNQGEYDLAILDYQKV 320

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           I+ + +           GMS+ ++           +       +++  +  S     A+ 
Sbjct: 321 ISNHGKDALAPAALLKQGMSFEKLTDH--------ETAKIIYKKLISDHGGSAEASQAKE 372

Query: 181 YVTVG 185
            +   
Sbjct: 373 RLGKL 377


>gi|254564207|ref|YP_003071302.1| hypothetical protein METDI5900 [Methylobacterium extorquens DM4]
 gi|254271485|emb|CAX27500.1| conserved hypothetical protein; putative exported protein
           [Methylobacterium extorquens DM4]
          Length = 341

 Score = 54.4 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 34/88 (38%), Gaps = 8/88 (9%)

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           ++   +A+      +Y+QA     ++I  +P  + V    Y +G SY Q  R        
Sbjct: 216 QADFEAAYALIRERQYEQAEMSLRQFIQSHPRDRLVPKATYWLGESYLQRSRS------- 268

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYV 182
            +   +   ++   Y NSP    A   +
Sbjct: 269 -REAAEQFLKVSTDYANSPVAPEAMLKL 295



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 44/107 (41%), Gaps = 14/107 (13%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           R  +     + + ++ +     V  A +++              G  YL+R     A  +
Sbjct: 229 RQYEQAEMSLRQFIQSHPRDRLVPKATYWL--------------GESYLQRSRSREAAEQ 274

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           F  V  +Y+++  A EAM +L  +  AL    +A   ++ ++ ++P 
Sbjct: 275 FLKVSTDYANSPVAPEAMLKLGTSLHALGAKAQACATLAEVERKFPS 321



 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 31/75 (41%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
             D    +  Y     +L+     +A E F + S D+  + VA +++L      ++ G  
Sbjct: 246 PRDRLVPKATYWLGESYLQRSRSREAAEQFLKVSTDYANSPVAPEAMLKLGTSLHALGAK 305

Query: 111 QQAASLGEEYITQYP 125
            QA +   E   ++P
Sbjct: 306 AQACATLAEVERKFP 320


>gi|94263068|ref|ZP_01286887.1| N-acetylmuramoyl-L-alanine amidase [delta proteobacterium MLMS-1]
 gi|93456611|gb|EAT06719.1| N-acetylmuramoyl-L-alanine amidase [delta proteobacterium MLMS-1]
          Length = 569

 Score = 54.4 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 53/147 (36%), Gaps = 16/147 (10%)

Query: 49  DSVTDVRYQREVYEKAVLFLKE--QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
           D         E Y++ +L  ++  +N+ +A +   +  R+ P   +A  SL +   + + 
Sbjct: 28  DPAEQFERISEYYQQQLLAGEQPRENWLRASQALQRLQRENPEHAIAPLSLYLLGNLHHR 87

Query: 107 AG-------KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
                        A +  E+    YP  +  D   + +   +        +D+   +   
Sbjct: 88  LHRQEQNPLDLAAAITFFEDMQATYPRHRLADDALFYLANIF-------RHDRDEPERAG 140

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGR 186
           + ++RI+  Y +      AR  +   R
Sbjct: 141 RTLARIIALYPDGELAAEARRQLPALR 167



 Score = 38.6 bits (89), Expect = 0.98,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 42/125 (33%), Gaps = 14/125 (11%)

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE---VEIG 197
           Y Q +      +       Q + R+            + + +    ++L  +E   +++ 
Sbjct: 40  YQQQLLAGEQPRENWLRASQALQRLQRENPEHAIAPLSLYLLGNLHHRLHRQEQNPLDLA 99

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL-ALMDEAREVVSLIQER 256
                     AAI  F+ + A Y     A++A+  L   +       + A   ++ I   
Sbjct: 100 ----------AAITFFEDMQATYPRHRLADDALFYLANIFRHDRDEPERAGRTLARIIAL 149

Query: 257 YPQGY 261
           YP G 
Sbjct: 150 YPDGE 154


>gi|161833774|ref|YP_001597970.1| hypothetical protein SMGWSS_173 [Candidatus Sulcia muelleri GWSS]
 gi|152206264|gb|ABS30574.1| hypothetical protein SMGWSS_173 [Candidatus Sulcia muelleri GWSS]
          Length = 325

 Score = 54.4 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 48/124 (38%), Gaps = 5/124 (4%)

Query: 100 SAFVQYSAGKYQQAASLGEEYITQ-YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
            A   +   KY  A +  +  +       +N+    + +GM Y     D  + Q+     
Sbjct: 87  IALCYFYLKKYDLAINFFKILLKTDNSAEENI----FNLGMCYYLQSNDYFFFQKNRMKY 142

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
           ++    + + Y NS Y+      +      L  K+  IG YY    +Y ++   F+ ++ 
Sbjct: 143 IKIFLFLRKNYPNSRYLPRIDKILYNAFLTLKKKKESIGMYYFNTKKYNSSRIVFKQIIN 202

Query: 219 NYSD 222
           +Y D
Sbjct: 203 DYQD 206


>gi|71667321|ref|XP_820611.1| serine/threonine protein phosphatase type 5 [Trypanosoma cruzi
           strain CL Brener]
 gi|70885962|gb|EAN98760.1| serine/threonine protein phosphatase type 5, putative [Trypanosoma
           cruzi]
          Length = 472

 Score = 54.4 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 41/151 (27%), Gaps = 27/151 (17%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
           +T       +  K     +E  +  A E + +              L   AF        
Sbjct: 1   MTAAEEADRLKNKGNEAFQEGKWHHAIELYTEALALH----KTPVILCNRAFAYLKTELA 56

Query: 111 QQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
             A +  +E +   P      Y   YY    ++  + +         K  L+    +V+ 
Sbjct: 57  GAALTDADEALRLDPG-----YVKAYYRKASAHLYLGKH--------KEALKDFKTVVQL 103

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
                    AR  +         KEV   R+
Sbjct: 104 IPGDK---DARKKLDFC-----EKEVRRIRF 126


>gi|94266423|ref|ZP_01290118.1| N-acetylmuramoyl-L-alanine amidase [delta proteobacterium MLMS-1]
 gi|93452965|gb|EAT03464.1| N-acetylmuramoyl-L-alanine amidase [delta proteobacterium MLMS-1]
          Length = 569

 Score = 54.4 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 53/147 (36%), Gaps = 16/147 (10%)

Query: 49  DSVTDVRYQREVYEKAVLFLKE--QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
           D         E Y++ +L  ++  +N+ +A +   +  R+ P   +A  SL +   + + 
Sbjct: 28  DPAEQFERISEYYQQQLLAGEQPRENWLRASQALQRLQRENPEHAIAPLSLYLLGNLHHR 87

Query: 107 AG-------KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
                        A +  E+    YP  +  D   + +   +        +D+   +   
Sbjct: 88  LHRQEQNPLDLAAAITFFEDMQATYPRHRLADDALFYLANIF-------RHDRDEPERAG 140

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGR 186
           + ++RI+  Y +      AR  +   R
Sbjct: 141 RTLARIIALYPDGELAAEARRQLPALR 167



 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 42/125 (33%), Gaps = 14/125 (11%)

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE---VEIG 197
           Y Q +      +       Q + R+            + + +    ++L  +E   +++ 
Sbjct: 40  YQQQLLAGEQPRENWLRASQALQRLQRENPEHAIAPLSLYLLGNLHHRLHRQEQNPLDLA 99

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL-ALMDEAREVVSLIQER 256
                     AAI  F+ + A Y     A++A+  L   +       + A   ++ I   
Sbjct: 100 ----------AAITFFEDMQATYPRHRLADDALFYLANIFRHDRDEPERAGRTLARIIAL 149

Query: 257 YPQGY 261
           YP G 
Sbjct: 150 YPDGE 154


>gi|205355824|ref|ZP_03222593.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni CG8421]
 gi|205346258|gb|EDZ32892.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni CG8421]
          Length = 215

 Score = 54.4 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 69/179 (38%), Gaps = 18/179 (10%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L +F S+   F      ++   +Y  S ++       Y++ +  L++++  KA +++N  
Sbjct: 7   LLVFLSV---FFSACSTKNDEGLYNLSASEW------YKQIIKDLQDKDLEKADDHYNGM 57

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
           + +     +    L++ A       +Y+ A    +EY  ++  S+N DY+ YL   +   
Sbjct: 58  ASEHVADPLLETILIILAQAHMDEEEYKLAEFYLDEYNKKFGNSRNADYIRYLKIKAKFD 117

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
                  +Q       + +   ++ Y  + Y    +  +T            +  +YL 
Sbjct: 118 AFAVPNRNQALMLESQKEIDTFLKDYPYTEYEPLVQTMLTK---------FNLAVFYLN 167


>gi|297182618|gb|ADI18777.1| DNA uptake lipoprotein [uncultured gamma proteobacterium
           HF4000_36I10]
          Length = 104

 Score = 54.4 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 22/39 (56%)

Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
                  +A+A +V+AY+ L + D A   +++++  +P+
Sbjct: 2   PQTSAVPDALAVMVQAYLLLGMDDLADRSLTVLRSNFPK 40


>gi|217976964|ref|YP_002361111.1| tol-pal system protein YbgF [Methylocella silvestris BL2]
 gi|217502340|gb|ACK49749.1| tol-pal system protein YbgF [Methylocella silvestris BL2]
          Length = 386

 Score = 54.4 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 43/108 (39%), Gaps = 14/108 (12%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           Q+  +   +  +  +++   S Y   A +Y+              G  + +R     A  
Sbjct: 275 QKQYEAAEKSFAAFIQKNPKSRYSADATYYL--------------GESFFQRSRPREAAE 320

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           ++  +   Y+ +  A EAM RL ++  +L   ++A    + I  +YP 
Sbjct: 321 QYLKISTQYATSARAPEAMLRLGQSLNSLGAKEQACATFAEIGRKYPN 368



 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 43/133 (32%), Gaps = 22/133 (16%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
               A+      +Y+ A      +I + P+S+      Y +G S+ Q  R         +
Sbjct: 265 EFDVAYGYLRQKQYEAAEKSFAAFIQKNPKSRYSADATYYLGESFFQRSR--------PR 316

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              +   +I  +Y  S     A   +    N L AKE     +        A I R    
Sbjct: 317 EAAEQYLKISTQYATSARAPEAMLRLGQSLNSLGAKEQACATF--------AEIGR---- 364

Query: 217 LANYSDAEHAEEA 229
              Y +A    +A
Sbjct: 365 --KYPNAPGNVKA 375



 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 47/132 (35%), Gaps = 8/132 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           ++ +        +   +E ++ A  +L+++ +  A + F    +  P +  +  +     
Sbjct: 247 ATPNALAPGAAPINPVKEEFDVAYGYLRQKQYEAAEKSFAAFIQKNPKSRYSADATYYLG 306

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
              +   + ++AA    +  TQY  S         +G S   +         A +     
Sbjct: 307 ESFFQRSRPREAAEQYLKISTQYATSARAPEAMLRLGQSLNSL--------GAKEQACAT 358

Query: 162 MSRIVERYTNSP 173
            + I  +Y N+P
Sbjct: 359 FAEIGRKYPNAP 370



 Score = 40.9 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 2/79 (2%)

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           E ++   YL++ +Y AA   F   +     + ++ +A   L E++   +   EA E    
Sbjct: 265 EFDVAYGYLRQKQYEAAEKSFAAFIQKNPKSRYSADATYYLGESFFQRSRPREAAEQYLK 324

Query: 253 IQERYPQGYWARYVETLVK 271
           I  +Y     AR  E +++
Sbjct: 325 ISTQYATS--ARAPEAMLR 341


>gi|240141699|ref|YP_002966179.1| hypothetical protein MexAM1_META1p5301 [Methylobacterium extorquens
           AM1]
 gi|240011676|gb|ACS42902.1| conserved hypothetical protein; putative exported protein
           [Methylobacterium extorquens AM1]
          Length = 341

 Score = 54.4 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 34/88 (38%), Gaps = 8/88 (9%)

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           ++   +A+      +Y+QA     ++I  +P  + V    Y +G SY Q  R        
Sbjct: 216 QADFEAAYALIRERQYEQAEMSLRQFIQSHPRDRLVPKATYWLGESYLQRSRS------- 268

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYV 182
            +   +   ++   Y NSP    A   +
Sbjct: 269 -REAAEQFLKVSTDYANSPVAPEAMLKL 295



 Score = 46.3 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 44/107 (41%), Gaps = 14/107 (13%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           R  +     + + ++ +     V  A +++              G  YL+R     A  +
Sbjct: 229 RQYEQAEMSLRQFIQSHPRDRLVPKATYWL--------------GESYLQRSRSREAAEQ 274

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           F  V  +Y+++  A EAM +L  +  AL    +A   ++ ++ ++P 
Sbjct: 275 FLKVSTDYANSPVAPEAMLKLGTSLHALGAKAQACATLAEVERKFPS 321



 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 40/108 (37%), Gaps = 13/108 (12%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
             D    +  Y     +L+     +A E F + S D+  + VA +++L      ++ G  
Sbjct: 246 PRDRLVPKATYWLGESYLQRSRSREAAEQFLKVSTDYANSPVAPEAMLKLGTSLHALGAK 305

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
            QA +   E   ++P              + A + + V  +Q+  +  
Sbjct: 306 AQACATLAEVERKFPS-------------ANAIVRQGVEREQKRARCA 340


>gi|87311645|ref|ZP_01093762.1| Alpha-2-macroglobulin-like [Blastopirellula marina DSM 3645]
 gi|87285648|gb|EAQ77565.1| Alpha-2-macroglobulin-like [Blastopirellula marina DSM 3645]
          Length = 2753

 Score = 54.4 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/273 (12%), Positives = 75/273 (27%), Gaps = 85/273 (31%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQY-----SAGKYQQA 113
           YE    +L+  N  +A   +           + +   +    +         +    +  
Sbjct: 244 YELGEAYLQSGNRVEARRSWEDLLSLHGTAKSKLIPLAAFRLSETYGIPNPGNKDDLELG 303

Query: 114 ASLGEEYITQYPESKNVD-------------------------------------YV--Y 134
            +  ++++  YP+ + V                                      Y    
Sbjct: 304 VAALKKFLATYPDHEKVASAHLRIVQSFLNQGRTEDALAAVDNFLQQANLEKSDEYASAQ 363

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT-------------NSPYVK--GAR 179
           YL G++ A+        Q+     +      ++++              N+ Y K   A 
Sbjct: 364 YLKGLALAR--------QKKFDDAIVAWRTYLQQHPTHGHWSEAQRQIINAEYAKGLDAL 415

Query: 180 FYVTVGRNQLAAKEVEI---------------GRYYLKRGEYVAAIPRFQLVLANYSDAE 224
                   + A  E  +                     + +Y AAI  ++ V++ Y   E
Sbjct: 416 EREDYDAARAAWGEFLVKYPIDERNRSIQNSFAEMLFAQKKYEAAIAAWRQVVSKYPQTE 475

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
            A  A  R+ +  +A  L   A  +V   +  +
Sbjct: 476 EASIAQYRVAQT-LAEKLSRLADAMVEYKKLNW 507



 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 62/194 (31%), Gaps = 25/194 (12%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA----ASL 116
           Y K       + + ++     Q ++ +P +   RK+          AG Y+ A     + 
Sbjct: 87  YLKGRAHFFAKQYKESIAVMTQLTKRYPDSAWTRKARFAIGVAYARAGDYRAAELAYQAE 146

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT--KLMLQYMSRIVERYTNSPY 174
            E  I+     + +    Y   + +A      P D +    +  L +  +  E       
Sbjct: 147 AEYLISL-QRKEEIA-AIY---LEFADAFFAPPADGKHPDYQRALAFYQKAAEIGP---- 197

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
           ++     +           ++I R Y +      AI  +Q  +    D      A   L 
Sbjct: 198 LRETNTRIQ----------LQIARCYKQLNNPGQAIQLYQAFINANDDDVLLLPARYELG 247

Query: 235 EAYVALALMDEARE 248
           EAY+      EAR 
Sbjct: 248 EAYLQSGNRVEARR 261



 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 67/226 (29%), Gaps = 63/226 (27%)

Query: 67   FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA-FVQYSAGKYQQA----ASLGEEYI 121
             L++ N ++A  YF      +P   +   + LM      +  G+Y+++     +  E   
Sbjct: 2211 SLEQGNSAEAVRYFEIVIEKYPELEI-PFAKLMKIGKAYHEIGEYERSYLVYRATVE--- 2266

Query: 122  TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                         ++V       +     DQ      ++ M+ +++     PYV  A + 
Sbjct: 2267 -----------ASFMV----ESQVAGFLQDQNEFLRSVEVMTALLQNSPPEPYVATADY- 2310

Query: 182  VTVGRNQLAAKEVEIGRYYLKRGEYVAA---------IPRFQ------LVLANY----SD 222
                   LA +              VAA         I R         +L N+     +
Sbjct: 2311 ------ALAQQVFA--------KAPVAAQDPQLREKHINRVTLVRRSLGMLENFLTAHPE 2356

Query: 223  AEHAEEAMARLVEAYVALALMDEA-----REVVSLIQERYPQGYWA 263
               A++A   L    + L    +A               +   YW 
Sbjct: 2357 DPSADQAAFSLATGLIELDAYQQAISVCGDYTRRYDNSNFLSSYWY 2402


>gi|157415335|ref|YP_001482591.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni 81116]
 gi|157386299|gb|ABV52614.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni 81116]
          Length = 215

 Score = 54.4 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 70/179 (39%), Gaps = 18/179 (10%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L +F SI   F      ++   +Y  S ++       Y++ +  L++++  KA +++N  
Sbjct: 7   LLVFLSI---FFSACSTKNDEGLYNLSASEW------YKQIIKDLQDKDLEKADDHYNGM 57

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
           + +     +   +L++ A       +Y+ A    +EY  ++  S+N DY+ YL   +   
Sbjct: 58  ASEHVADPLLETTLIILAQAHMDEEEYKLAEFYLDEYNKKFGNSRNADYIRYLKIKAKFD 117

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
                  +Q       + +   ++ Y  + Y    +  +T            +  +YL 
Sbjct: 118 AFAVPNRNQALMLESQKEIDTFLKDYPYTEYEPLVQTMLTK---------FNLAVFYLN 167


>gi|88705613|ref|ZP_01103323.1| conserved hypothetical protein, secreted [Congregibacter litoralis
           KT71]
 gi|88700126|gb|EAQ97235.1| conserved hypothetical protein, secreted [Congregibacter litoralis
           KT71]
          Length = 304

 Score = 54.4 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 43/126 (34%), Gaps = 12/126 (9%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
            V +   + + Y  A   ++ Q F +A   FN     +P    A  +        Y    
Sbjct: 174 EVAEQPGEGDAYRAAYALVRGQEFDQAVSAFNAFLERYPAGRFAPNAHYWLGE-LYLVTD 232

Query: 110 YQQAASLGEEYITQ---YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
                +  + ++     YP +  +    Y +G  +         D+       ++++R++
Sbjct: 233 PVDPEASRQAFMLLLNQYPTNAKIPDALYKLGRVHFMKGN---RDRSR-----EFLNRVI 284

Query: 167 ERYTNS 172
             Y +S
Sbjct: 285 REYPDS 290



 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 46/131 (35%), Gaps = 21/131 (16%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
             ++R   +DQ      +   +  +ERY    +   A +++              G  YL
Sbjct: 189 YALVRGQEFDQ-----AVSAFNAFLERYPAGRFAPNAHYWL--------------GELYL 229

Query: 202 KRG--EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
                +  A+   F L+L  Y       +A+ +L   +      D +RE ++ +   YP 
Sbjct: 230 VTDPVDPEASRQAFMLLLNQYPTNAKIPDALYKLGRVHFMKGNRDRSREFLNRVIREYPD 289

Query: 260 GYWARYVETLV 270
              AR     +
Sbjct: 290 SSAARLAGDFL 300


>gi|332716441|ref|YP_004443907.1| hypothetical protein AGROH133_12011 [Agrobacterium sp. H13-3]
 gi|325063126|gb|ADY66816.1| hypothetical protein AGROH133_12011 [Agrobacterium sp. H13-3]
          Length = 330

 Score = 54.4 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 50/143 (34%), Gaps = 14/143 (9%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
           +           SR     +   +  + ++Y+ A   +   ++  A + F Q  + +P  
Sbjct: 180 SGSLPGVTTGNGSRKTDPVNTAALTSEGDIYQAAYGHVLSGDYKLAEQGFQQYLQGYPKG 239

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE---SKNVDYVYYLVGMSYAQMIRD 147
             A  +       QYS GK+ +A    + ++  +     S     +   +GMS A +   
Sbjct: 240 TKAADASFWLGEAQYSQGKFNEA---AKTFLNGHQTYGKSPKAPEMLMKLGMSLAALDN- 295

Query: 148 VPYDQRATKLMLQYMSRIVERYT 170
                  T+     +  + +RY 
Sbjct: 296 -------TETACATLREVPKRYP 311



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 36/109 (33%), Gaps = 14/109 (12%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              KL  Q   + ++ Y        A F++   +                +G++  A   
Sbjct: 220 GDYKLAEQGFQQYLQGYPKGTKAADASFWLGEAQ--------------YSQGKFNEAAKT 265

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           F      Y  +  A E + +L  +  AL   + A   +  + +RYP   
Sbjct: 266 FLNGHQTYGKSPKAPEMLMKLGMSLAALDNTETACATLREVPKRYPSAS 314


>gi|218885876|ref|YP_002435197.1| tol-pal system protein YbgF [Desulfovibrio vulgaris str. 'Miyazaki
           F']
 gi|218756830|gb|ACL07729.1| tol-pal system protein YbgF [Desulfovibrio vulgaris str. 'Miyazaki
           F']
          Length = 285

 Score = 54.0 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 54/146 (36%), Gaps = 10/146 (6%)

Query: 39  ERQSSRDVYLDSVTDVR--YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
            + +SR V        +    +  YE A+  L+     +A   F+    D+P + +   +
Sbjct: 145 AKSASRTVQKPEPKPAKGVSDKAAYESALNLLQRGKTDEARVRFDGFLGDYPNSALVPNA 204

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
           L       Y+  +Y  A    +E   ++P+          + ++Y Q+  D        +
Sbjct: 205 LYWKGEALYAQRRYADAIVAFKEVTARFPKHHKAADSLLKIALAYKQLGDD-----ENVR 259

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYV 182
             L+ +    E + +SP  K AR   
Sbjct: 260 FHLKALR---EDHPDSPAAKLARQRF 282



 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 44/137 (32%), Gaps = 22/137 (16%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           + K+   SA      GK  +A    + ++  YP S  V    Y  G +     R      
Sbjct: 164 SDKAAYESALNLLQRGKTDEARVRFDGFLGDYPNSALVPNALYWKGEALYAQRRYAD--- 220

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
                 +     +  R+        +   + +   QL   E  + R++LK          
Sbjct: 221 -----AIVAFKEVTARFPKHHKAADSLLKIALAYKQLGDDE-NV-RFHLK---------- 263

Query: 213 FQLVLANYSDAEHAEEA 229
              +  ++ D+  A+ A
Sbjct: 264 --ALREDHPDSPAAKLA 278



 Score = 43.2 bits (101), Expect = 0.045,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 39/110 (35%), Gaps = 14/110 (12%)

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
           T          +  Y NS  V  A ++                  Y +R  Y  AI  F+
Sbjct: 181 TDEARVRFDGFLGDYPNSALVPNALYWKGEAL-------------YAQRR-YADAIVAFK 226

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
            V A +     A +++ ++  AY  L   +  R  +  ++E +P    A+
Sbjct: 227 EVTARFPKHHKAADSLLKIALAYKQLGDDENVRFHLKALREDHPDSPAAK 276


>gi|301020782|ref|ZP_07184848.1| tol-pal system protein YbgF [Escherichia coli MS 69-1]
 gi|300398507|gb|EFJ82045.1| tol-pal system protein YbgF [Escherichia coli MS 69-1]
          Length = 225

 Score = 54.0 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 49/156 (31%), Gaps = 9/156 (5%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89
           +           +      +          Y  A+  +++++    A   F    +++P 
Sbjct: 78  SGAAASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPD 137

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +     +      + Y+ GK   AA      +  YP+S       + VG+        + 
Sbjct: 138 STYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGV--------IM 189

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            D+  T        +++ +Y  +   K A+  +   
Sbjct: 190 QDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM 225



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      ++ Y +S Y+  A +++               
Sbjct: 104 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLN----------- 152

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
                +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 153 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 209

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 210 PGTDGAKQAQK 220



 Score = 47.0 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I  YP+S  +    Y +G       +              Y + +V+ Y 
Sbjct: 122 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 173

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A F V V                  +G+   A   +Q V++ Y   + A++A 
Sbjct: 174 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 219

Query: 231 ARL 233
            RL
Sbjct: 220 KRL 222


>gi|301027071|ref|ZP_07190445.1| tol-pal system protein YbgF [Escherichia coli MS 196-1]
 gi|299879436|gb|EFI87647.1| tol-pal system protein YbgF [Escherichia coli MS 196-1]
          Length = 225

 Score = 54.0 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 46/126 (36%), Gaps = 9/126 (7%)

Query: 61  YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A+  +++++    A   F    +++P +     +      + Y+ GK   AA     
Sbjct: 108 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 167

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +  YP+S       + VG+        +  D+  T        +++ +Y  +   K A+
Sbjct: 168 VVKNYPKSPKAADAMFKVGV--------IMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQ 219

Query: 180 FYVTVG 185
             +   
Sbjct: 220 KRLNAM 225



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      ++ Y +S Y+  A +++               
Sbjct: 104 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLN----------- 152

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
                +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 153 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 209

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 210 PGTDGAKQAQK 220



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I  YP+S  +    Y +G       +              Y + +V+ Y 
Sbjct: 122 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 173

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A F V V                  +G+   A   +Q V++ Y   + A++A 
Sbjct: 174 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 219

Query: 231 ARL 233
            RL
Sbjct: 220 KRL 222


>gi|294669631|ref|ZP_06734698.1| hypothetical protein NEIELOOT_01532 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308544|gb|EFE49787.1| hypothetical protein NEIELOOT_01532 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 225

 Score = 54.0 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 39/112 (34%), Gaps = 10/112 (8%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           E A    +  NF+ A +           +   R+S+ +        G  +   ++G  YI
Sbjct: 110 ESARKQYRSGNFAAAAKLLQASESGGSGSEHDRQSMYLLMQSHQRLGNCESVINIGNRYI 169

Query: 122 TQYPESKNVDYVYYLVGMS-YAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           +++  S       + +G   +    RDV  D            +++  Y +S
Sbjct: 170 SRFRNSPEAADAMFSIGQCQWNMQQRDVARD---------TWRKLMLIYPDS 212


>gi|300114393|ref|YP_003760968.1| PEP-CTERM system TPR-repeat lipoprotein [Nitrosococcus watsonii
           C-113]
 gi|299540330|gb|ADJ28647.1| PEP-CTERM system TPR-repeat lipoprotein [Nitrosococcus watsonii
           C-113]
          Length = 931

 Score = 54.0 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 65/173 (37%), Gaps = 37/173 (21%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRD---FPFAGVARKSLLMSAFVQYSAGKYQQA 113
             ++  +A++ +  +++  A       S+     P    A + LL      +   +Y  A
Sbjct: 238 ASDLLNRALVRIYLKDYEGAASDLETLSKRAPNHPGVTYA-QGLL-----YFQQQQYADA 291

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
            +  ++ + Q P  K +  V+Y  G+++ Q        Q   +   + + + +  +  S 
Sbjct: 292 LTDFQKTLNQNP--KYMPAVFY-AGIAHYQ--------QGQMEQAERLLQQFLAYFPQSE 340

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
                           AAK + + R+   +G+Y  A    + +LA Y +  H 
Sbjct: 341 ---------------AAAKVLAVVRF--HKGDYKGAESVLKPLLARYPNDTHI 376



 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/231 (13%), Positives = 78/231 (33%), Gaps = 46/231 (19%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y + +L+ ++Q ++ A   F +     P       ++  +    Y  G+ +QA  L +++
Sbjct: 276 YAQGLLYFQQQQYADALTDFQKTLNQNP--KYMP-AVFYAGIAHYQQGQMEQAERLLQQF 332

Query: 121 ITQYPESKNVDYVY----YLVG------------MSYA-------QMIRDVPYDQRATKL 157
           +  +P+S+    V     +  G            ++          ++ D+   Q   + 
Sbjct: 333 LAYFPQSEAAAKVLAVVRFHKGDYKGAESVLKPLLARYPNDTHILTLMGDIALRQGKARE 392

Query: 158 MLQYMSRIVERYTNS-----------PYVKGARFYVTVGRN------QLAAKEVEIGRYY 200
              Y  ++  +   S            +    +  + +         Q+   ++ +   +
Sbjct: 393 GTGYFQQVTIQEPESAAAYMKLGLGLEFSGEHQQGIQMLEKALKLEPQMPQADLLVILSH 452

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
           L+   +  AI   Q +   Y D+    E +  +  AY+      +AR    
Sbjct: 453 LQARNFDKAIEAAQQMHRKYPDSP---EPLTLMGGAYLGKGEKAKARSAFR 500



 Score = 38.6 bits (89), Expect = 0.91,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 56/147 (38%), Gaps = 16/147 (10%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
           F    +    G + ++ + +     T +     +  +A L L++   S+A E + +   D
Sbjct: 684 FVMARLLMQEGKQEEAKKQLRELKRTHLNQPEVIDLEAQLALQQNQPSEAIEIYQKAHND 743

Query: 87  FPFA-GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
           FP +        L  A +Q+  GK + + +  E+++  +PE   V +V      +   ++
Sbjct: 744 FPDSNRWP----LKLAQIQWQTGKQKDSLATLEKWLKSHPEDFQVQFV----AANNYLLL 795

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNS 172
                            +++ E+   +
Sbjct: 796 GQNNR-------AESAFAKLHEQAPEN 815



 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 76/227 (33%), Gaps = 50/227 (22%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
               ++  A L +++ N  KA   + Q  +  P        LL  A ++   G   +A  
Sbjct: 509 APNAIHNLANLEIQKGNLEKAISLYQQTLKYNPNHLHT---LLRLAALEQQRGNIAKAKI 565

Query: 116 LGEEYITQYPE--SKNV---DYVYYLV------GMSYAQMIRDVPYDQRA---------- 154
           L E+ +  +P+  +  +   DY  YL        ++    I+D   D  A          
Sbjct: 566 LLEQAMQAHPQALNPRLLLGDY--YLRDGQPQKALAITSDIQDTFPDNPALLALAGKIQL 623

Query: 155 ----TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
               ++  L+Y +++V    +S                 A  E+   R Y +  ++    
Sbjct: 624 ALGKSRNALRYFNKLVSLQPDS---------------ATAHYEL--ARAYYETKQFTKTQ 666

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
              +  L    +      A   +    +     +EA++ +  ++  +
Sbjct: 667 TELEKTLVLDPN---HAGARFVMARLLMQEGKQEEAKKQLRELKRTH 710


>gi|297569847|ref|YP_003691191.1| N-acetylmuramoyl-L-alanine amidase [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296925762|gb|ADH86572.1| N-acetylmuramoyl-L-alanine amidase [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 581

 Score = 54.0 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 42/124 (33%), Gaps = 14/124 (11%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYI 121
           K +N+ +A     +  R      V  KSL +   + +             +A +  +E  
Sbjct: 49  KRENWQRAARALQELHRQQARQEVGAKSLYLLGNLYHQLYRRSGIPLDLAEAITSLQEVQ 108

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
             YP     D   + V   +        Y+Q+  +   Q + R+++ Y       GAR  
Sbjct: 109 GLYPNHPLADDALFYVAHIFL-------YEQQDWQRAEQVLKRLLDLYPAGDVAPGAREM 161

Query: 182 VTVG 185
           +   
Sbjct: 162 LATI 165


>gi|89068038|ref|ZP_01155455.1| hypothetical protein OG2516_07652 [Oceanicola granulosus HTCC2516]
 gi|89046277|gb|EAR52334.1| hypothetical protein OG2516_07652 [Oceanicola granulosus HTCC2516]
          Length = 274

 Score = 54.0 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/123 (13%), Positives = 42/123 (34%), Gaps = 10/123 (8%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY-QQAAS 115
           ++  +E+A   L   +F  A + F   +  +P   ++ ++  +      + G+    A +
Sbjct: 151 EQADFERAQEALAAGDFRGAVDLFATHTETYPGGPLSAQAHFLRGEAHEALGEPQAAARA 210

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
             E +  + P  +      + +G +   +                 +S +  R+  S   
Sbjct: 211 YLEAFSGE-PRGEIAPDALFRLGGTLGVL--------GQVDEACVTLSEVTNRFPESDAA 261

Query: 176 KGA 178
             A
Sbjct: 262 LEA 264



 Score = 38.9 bits (90), Expect = 0.69,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 37/120 (30%), Gaps = 19/120 (15%)

Query: 147 DVPYDQRA-----TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
           D    Q A      +  +   +   E Y   P    A F        L            
Sbjct: 154 DFERAQEALAAGDFRGAVDLFATHTETYPGGPLSAQAHFLRGEAHEAL------------ 201

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             GE  AA   +    +     E A +A+ RL      L  +DEA   +S +  R+P+  
Sbjct: 202 --GEPQAAARAYLEAFSGEPRGEIAPDALFRLGGTLGVLGQVDEACVTLSEVTNRFPESD 259


>gi|288957827|ref|YP_003448168.1| hypothetical protein AZL_009860 [Azospirillum sp. B510]
 gi|288910135|dbj|BAI71624.1| hypothetical protein AZL_009860 [Azospirillum sp. B510]
          Length = 307

 Score = 54.0 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 45/141 (31%), Gaps = 10/141 (7%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
              T      + YE+A   L+  ++ +A +              A  +        Y   
Sbjct: 173 PPSTAGLSPEKQYEQAFELLRNSDYDRAEKALQDFIAKNKSHAYAGNAQYWLGESYYVRN 232

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           K+ +AA    E +++Y  +         +GM+  QM R                ++++ +
Sbjct: 233 KFPEAAQAFGEVLSKYRTNPKAADSLLKLGMTLQQMNRKSD--------ACTAFNQLMSK 284

Query: 169 YTNSPYVKGARFYVTVGRNQL 189
           +  +      +      R ++
Sbjct: 285 FPEA--SASVKRRADTERKRI 303



 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 29/96 (30%), Gaps = 8/96 (8%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
               AF       Y +A    +++I +           Y +G SY    +          
Sbjct: 184 QYEQAFELLRNSDYDRAEKALQDFIAKNKSHAYAGNAQYWLGESYYVRNKFP-------- 235

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
              Q    ++ +Y  +P    +   + +   Q+  K
Sbjct: 236 EAAQAFGEVLSKYRTNPKAADSLLKLGMTLQQMNRK 271



 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 45/120 (37%), Gaps = 19/120 (15%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            +++R+  YD+       + +   + +  +  Y   A++++              G  Y 
Sbjct: 189 FELLRNSDYDR-----AEKALQDFIAKNKSHAYAGNAQYWL--------------GESYY 229

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            R ++  A   F  VL+ Y     A +++ +L      +    +A    + +  ++P+  
Sbjct: 230 VRNKFPEAAQAFGEVLSKYRTNPKAADSLLKLGMTLQQMNRKSDACTAFNQLMSKFPEAS 289


>gi|307153280|ref|YP_003888664.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC
           7822]
 gi|306983508|gb|ADN15389.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7822]
          Length = 1048

 Score = 54.0 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 86/253 (33%), Gaps = 45/253 (17%)

Query: 18  QLYKFALTIFFSIAVCFLVGWER-------QSSRDVYLDSVTDVRYQREVYEKAVLFLKE 70
           +   F+L +  S+   F +             S +  L  +T     + + E+ +  L+ 
Sbjct: 2   KSKTFSLRVLLSLLTTFNLSCATLISDPQVSLSENGELAQMTQENKAKTLLEQGMQQLEA 61

Query: 71  QNFSKAYEYFNQC--------SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
            ++  A + F +          R         ++L       +  G Y +A         
Sbjct: 62  GDYQAAIQSFQEALILLRQQNDRQGEG-----QALKNLGNAYFWLGDYAKAL-------- 108

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN-SPYVKGARFY 181
                   DY      +  A+ I D   + RA   +    + + E Y   + Y + +   
Sbjct: 109 --------DYGQ--KALDIARDIGDQDLEARALLNLGNLANELQE-YPKANDYYQQSLNL 157

Query: 182 VTVGRNQ-LAAKEV-EIGRYYLKRGEYVAAIPRFQL---VLANYSDAEHAEEAMARLVEA 236
               +N+ L AK +  +G+    +G Y  AI   Q    +  N SD +    A+ RL  A
Sbjct: 158 AIKSKNRELQAKVLGSMGQSNYSQGHYDEAIKYLQESLKIAENLSDNKLQVNALIRLGRA 217

Query: 237 YVALALMDEAREV 249
           Y     + +A + 
Sbjct: 218 YQEKKELTKAIDY 230



 Score = 38.9 bits (90), Expect = 0.71,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 68/218 (31%), Gaps = 30/218 (13%)

Query: 64  AVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
                 + ++ +A +Y     + + +     +   +L+          +  +A    ++ 
Sbjct: 175 GQSNYSQGHYDEAIKYLQESLKIAENLSDNKLQVNALIRLGRAYQEKKELTKAIDYYQQS 234

Query: 121 ITQ-----YPESKNV-----DYVY-----YLVGMSYAQMIRDVPY---DQRATKLMLQYM 162
           +        P  + +        Y     Y   + Y++    +     D +     L  +
Sbjct: 235 LKIVRELNNPLQERIVLMALGLAYNESRDYDQAIEYSKQGVTIGREIKDPQGESESLYVL 294

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQL--AAKEVEIGRY----YLKRGEYVAAIPRFQLV 216
                   +   V        V   QL    +EVEI  +    Y   GEY+  I   +  
Sbjct: 295 GLAYNGKGDYQKVVETYEQALVIVRQLNNPQREVEILNFLGVAYGALGEYLQQINYLKQA 354

Query: 217 L---ANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
           L     +S++E   +A+  L +A+  L     A +   
Sbjct: 355 LTLAKTFSESELEIKALWLLGQAHFNLGDYAAAIKYQK 392


>gi|86150450|ref|ZP_01068675.1| lipoprotein, putative [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|86150832|ref|ZP_01069048.1| lipoprotein, putative [Campylobacter jejuni subsp. jejuni 260.94]
 gi|86152697|ref|ZP_01070902.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|88596825|ref|ZP_01100062.1| lipoprotein, putative [Campylobacter jejuni subsp. jejuni 84-25]
 gi|121613300|ref|YP_001000752.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni 81-176]
 gi|167005672|ref|ZP_02271430.1| lipoprotein, putative [Campylobacter jejuni subsp. jejuni 81-176]
 gi|218562688|ref|YP_002344467.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|315124558|ref|YP_004066562.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|85839045|gb|EAQ56309.1| lipoprotein, putative [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|85842002|gb|EAQ59248.1| lipoprotein, putative [Campylobacter jejuni subsp. jejuni 260.94]
 gi|85843582|gb|EAQ60792.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|87249179|gb|EAQ72140.1| lipoprotein, putative [Campylobacter jejuni subsp. jejuni 81-176]
 gi|88191666|gb|EAQ95638.1| lipoprotein, putative [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112360394|emb|CAL35191.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|284926303|gb|ADC28655.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni IA3902]
 gi|315018280|gb|ADT66373.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315928025|gb|EFV07345.1| tRNA/guanine-N1 methyltransferase [Campylobacter jejuni subsp.
           jejuni DFVF1099]
 gi|315929222|gb|EFV08441.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni 305]
          Length = 215

 Score = 54.0 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 70/179 (39%), Gaps = 18/179 (10%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L +F S+   F      ++   +Y  S ++       Y++ +  L++++  KA +++N  
Sbjct: 7   LLVFLSV---FFSACSTKNDEGLYNLSASEW------YKQIIKDLQDKDLEKADDHYNGM 57

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
           + +     +   +L++ A       +Y+ A    +EY  ++  S+N DY+ YL   +   
Sbjct: 58  ASEHVADPLLETTLIILAQAHMDEEEYKLAEFYLDEYNKKFGNSRNADYIRYLKIKAKFD 117

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
                  +Q       + +   ++ Y  + Y    +  +T            +  +YL 
Sbjct: 118 AFAVPNRNQALMLESQKEIDTFLKDYPYTEYEPLVQTMLTK---------FNLAVFYLN 167


>gi|162457519|ref|YP_001619886.1| hypothetical protein sce9233 [Sorangium cellulosum 'So ce 56']
 gi|161168101|emb|CAN99406.1| hypothetical protein predicted by Glimmer/Critica [Sorangium
           cellulosum 'So ce 56']
          Length = 286

 Score = 54.0 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 47/139 (33%), Gaps = 16/139 (11%)

Query: 47  YLDSVTDVRYQREV--YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           + DSV   R +  +  Y+  +  ++   + +A   F    R    A     + L  A   
Sbjct: 150 FSDSVDKSRSELSIKSYQTGLDHMRTGRWHEAAVAFEDAIRQKETASHTPSARLNLARAY 209

Query: 105 YSAGKYQQAASLGEEYITQYPESKN---VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
               + + A  L    +T    S +   +D   +L+             D +A       
Sbjct: 210 RRLNRQRDAIPLL---MTLSEASPDREVMDDATFLLAECL--------LDIQAWNDAKTT 258

Query: 162 MSRIVERYTNSPYVKGARF 180
           +   + R+ +S Y+  AR 
Sbjct: 259 LRSFIRRFPDSAYINDARL 277


>gi|170738631|ref|YP_001767286.1| tol-pal system protein YbgF [Methylobacterium sp. 4-46]
 gi|168192905|gb|ACA14852.1| tol-pal system protein YbgF [Methylobacterium sp. 4-46]
          Length = 313

 Score = 54.0 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 8/99 (8%)

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           K+   +A+      +Y+QA     ++I  +P    V    Y +G +Y Q  R        
Sbjct: 188 KADYEAAYAYVLQRQYEQAEMRLRQFIQSHPRDALVPDATYWLGETYLQRNR-------- 239

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
           T+   +   ++   Y  S     A   +    N L A+E
Sbjct: 240 TREAAEQFLKVSTDYARSRKAPEAMLKLGASLNALGARE 278



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 46/108 (42%), Gaps = 14/108 (12%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           QR  +     + + ++ +     V  A +++              G  YL+R     A  
Sbjct: 200 QRQYEQAEMRLRQFIQSHPRDALVPDATYWL--------------GETYLQRNRTREAAE 245

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           +F  V  +Y+ +  A EAM +L  +  AL   ++A   ++ ++ ++PQ
Sbjct: 246 QFLKVSTDYARSRKAPEAMLKLGASLNALGAREQACATLAELERKFPQ 293


>gi|322435533|ref|YP_004217745.1| hypothetical protein AciX9_1919 [Acidobacterium sp. MP5ACTX9]
 gi|321163260|gb|ADW68965.1| hypothetical protein AciX9_1919 [Acidobacterium sp. MP5ACTX9]
          Length = 270

 Score = 54.0 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 3/81 (3%)

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
           AK++E+  YY   G Y+A++ R +  +  + D     EA   L  A   +   ++A    
Sbjct: 190 AKDLEVAHYYFTTGNYLASLNRAKDAVRLFPD---DPEAHYALALAAQNMKNQEQASAEF 246

Query: 251 SLIQERYPQGYWARYVETLVK 271
               +  P G  A+  E  +K
Sbjct: 247 QTYLKLDPGGDHAKDAEKALK 267



 Score = 38.9 bits (90), Expect = 0.66,   Method: Composition-based stats.
 Identities = 9/83 (10%), Positives = 25/83 (30%), Gaps = 11/83 (13%)

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
           L  A   ++ G Y  + +  ++ +  +P+     Y      ++   M        +  + 
Sbjct: 193 LEVAHYYFTTGNYLASLNRAKDAVRLFPDDPEAHYAL---ALAAQNM--------KNQEQ 241

Query: 158 MLQYMSRIVERYTNSPYVKGARF 180
                   ++      + K A  
Sbjct: 242 ASAEFQTYLKLDPGGDHAKDAEK 264


>gi|296120993|ref|YP_003628771.1| hypothetical protein Plim_0726 [Planctomyces limnophilus DSM 3776]
 gi|296013333|gb|ADG66572.1| hypothetical protein Plim_0726 [Planctomyces limnophilus DSM 3776]
          Length = 496

 Score = 54.0 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 61/167 (36%), Gaps = 14/167 (8%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQY-SAGKYQQAASLGEEYITQ----YPESKNV 130
           A         + P   +A  + LM A   +    K+ +A    + Y +     YP S +V
Sbjct: 235 AIAALRAIWLNDPAGPLADDA-LMLAASHFARRSKWAEA----DNYFSLLREQYPNSPHV 289

Query: 131 DYVYYLVGMSYAQMIR--DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
               +L+G S+ +++      YD R  +   Q     +  Y  +         +      
Sbjct: 290 QKA-FLLG-SHVKLMSYEGAGYDGRRLEEARQLKETALRLYPEAEDRARLEKELAGIEEA 347

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
             A+  E  R+Y ++    A      +++  Y ++ +A +A   L E
Sbjct: 348 EVARLWEQIRFYQRKRRDSAVGLYCHMLIDRYPNSSYAPQARQILNE 394



 Score = 49.3 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 64/167 (38%), Gaps = 22/167 (13%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G    + R ++L+          +   A  F +   +++A  YF+     +P +   +K+
Sbjct: 233 GNAIAALRAIWLNDPAGPLADDALMLAASHFARRSKWAEADNYFSLLREQYPNSPHVQKA 292

Query: 97  -------LLMSAF--VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS------- 140
                   LMS +    Y   + ++A  L E  +  YPE++  D       ++       
Sbjct: 293 FLLGSHVKLMS-YEGAGYDGRRLEEARQLKETALRLYPEAE--DRARLEKELAGIEEAEV 349

Query: 141 --YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
               + IR     +R + + L Y   +++RY NS Y   AR  +   
Sbjct: 350 ARLWEQIRFYQRKRRDSAVGL-YCHMLIDRYPNSSYAPQARQILNEL 395



 Score = 43.6 bits (102), Expect = 0.033,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 78/242 (32%), Gaps = 40/242 (16%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            E + KA    KE  F++A   F + ++ +  + +   +L M A   +    Y  A  + 
Sbjct: 93  SEEFAKAEELFKEGKFAEAESAFKKIAKKYKKSEIREDALFMQAESAFQRQHYADAYDIV 152

Query: 118 EEYITQYPESKNVDYV---YYLVGMSYAQ-----MIRDVPY-----------------DQ 152
              + +YP S+ +D +    + +   +        I ++                   D+
Sbjct: 153 AVLLKEYPSSRYLDSISRRLFEIARIWLNDPKVAQIDEIQQTNLQNPGERLPPPSPVEDK 212

Query: 153 RATKLMLQYMSRIVERY-TNSPYVKGARFYVTVGRN---QLAAKE-VEIGRYYLKRGEYV 207
           + +   L         +         A        +    LA    +    ++ +R ++ 
Sbjct: 213 KQSAFALNLFDEKKPVFDPEGN--AIAALRAIWLNDPAGPLADDALMLAASHFARRSKWA 270

Query: 208 AAIPRFQLVLANYSDAEHAEEAM----ARLVEAYVALALMDEAREVVSLIQER----YPQ 259
            A   F L+   Y ++ H ++A        + +Y          E    ++E     YP+
Sbjct: 271 EADNYFSLLREQYPNSPHVQKAFLLGSHVKLMSYEGAGYDGRRLEEARQLKETALRLYPE 330

Query: 260 GY 261
             
Sbjct: 331 AE 332


>gi|302038735|ref|YP_003799057.1| hypothetical protein NIDE3446 [Candidatus Nitrospira defluvii]
 gi|300606799|emb|CBK43132.1| conserved protein of unknown function [Candidatus Nitrospira
           defluvii]
          Length = 277

 Score = 54.0 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 53/163 (32%), Gaps = 38/163 (23%)

Query: 75  KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES------- 127
           +A   + Q    +P + VA  +L      Q  A +        + ++  +  +       
Sbjct: 93  QAINLYKQVVDQYPRSPVAPLALFHLGNAQVLANEVDAGIETYKRFMLLHGSNTSLLGLV 152

Query: 128 -KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
            + + Y Y + G            DQ      ++  + I+E       + GA     V  
Sbjct: 153 QQRMAYAYLVKG----------DRDQ-----AVKAFTGILE-------IPGALNKDHVLF 190

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
             LA  E         +     A+  +Q ++ NY ++    EA
Sbjct: 191 E-LAKLE-------ESQSRPEGALAHYQDLMKNYPNSPFTSEA 225


>gi|297569747|ref|YP_003691091.1| hypothetical protein DaAHT2_1781 [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296925662|gb|ADH86472.1| hypothetical protein DaAHT2_1781 [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 239

 Score = 54.0 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 57/153 (37%), Gaps = 26/153 (16%)

Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
           VD   Y++G+ YA    D  +  R  +L  QY ++++  + NSP V  A   +    + +
Sbjct: 58  VDLALYVLGLVYA----DPAFKDRNAQLSRQYFAQLIRHFPNSPLVPEANI-LVDLYDAM 112

Query: 190 AAKEVEIGRYYLKRG-----------------EYVAAIPRFQLVLANYSDAEHAEEAMAR 232
           AA+++ I     +                    +  A  + + +L        A+EA+  
Sbjct: 113 AARDLAIATLSERLKTASEATAALPRPLVEDQNFEEAARKNEQILQQAGAGPPADEALYN 172

Query: 233 LVEAYVALA----LMDEAREVVSLIQERYPQGY 261
           L   Y           +AR+  + I   +P   
Sbjct: 173 LGLIYAHGDNPARDYQQARDYFARIAGEFPDSR 205


>gi|228470608|ref|ZP_04055465.1| putative TPR domain protein [Porphyromonas uenonis 60-3]
 gi|228307735|gb|EEK16711.1| putative TPR domain protein [Porphyromonas uenonis 60-3]
          Length = 1003

 Score = 54.0 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 61/172 (35%), Gaps = 24/172 (13%)

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
                Y  G Y  A    EE     P+++   Y  Y+        + D+   ++  K  +
Sbjct: 545 LGDAHYMQGHYTPAVRYYEEAYRIAPDNQ--VYALYM--------LSDIEGLKKDYKAQI 594

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
             + +++ R+ NS Y   A        +Q  A E+         G++  AI  F  +   
Sbjct: 595 AALDKLIARHPNSLYKPRA------MYDQGRAMELY--------GQHAEAIGTFTRLTQE 640

Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           Y  +E+  +A  +L   Y      + A E    +    PQ   A+     +K
Sbjct: 641 YPQSEYGRKAALQLALLYYNRNETNRAIETYKALLAEAPQSGEAKQAYEALK 692



 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 34/78 (43%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
            R +Y++          ++A   F + ++++P +   RK+ L  A + Y+  +  +A   
Sbjct: 611 PRAMYDQGRAMELYGQHAEAIGTFTRLTQEYPQSEYGRKAALQLALLYYNRNETNRAIET 670

Query: 117 GEEYITQYPESKNVDYVY 134
            +  + + P+S      Y
Sbjct: 671 YKALLAEAPQSGEAKQAY 688



 Score = 44.0 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 11/111 (9%), Positives = 33/111 (29%), Gaps = 8/111 (7%)

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
           ++++       ++     P +    +++          G++ +A         +YP+S+ 
Sbjct: 587 KKDYKAQIAALDKLIARHPNSLYKPRAMYDQGRAMELYGQHAEAIGTFTRLTQEYPQSEY 646

Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
                  + + Y             T   ++    ++     S   K A  
Sbjct: 647 GRKAALQLALLYYNR--------NETNRAIETYKALLAEAPQSGEAKQAYE 689



 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 23/214 (10%), Positives = 58/214 (27%), Gaps = 44/214 (20%)

Query: 64  AVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQA--------- 113
           A L  ++  + +A +      ++    +   + +  +  + Q    +Y  A         
Sbjct: 470 AQLLSQQGAYKRASQALTAILNKRTATSAQLQIARYLLGYSQIKQKQYSAATQTLSILLQ 529

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
               +  +        +   +Y+               Q      ++Y         ++ 
Sbjct: 530 EGTLDNTLQAD-VHARLGDAHYM---------------QGHYTPAVRYYEEAYRIAPDNQ 573

Query: 174 -YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
            Y       +   +                  +Y A I     ++A + ++ +   AM  
Sbjct: 574 VYALYMLSDIEGLK-----------------KDYKAQIAALDKLIARHPNSLYKPRAMYD 616

Query: 233 LVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
              A        EA    + + + YPQ  + R  
Sbjct: 617 QGRAMELYGQHAEAIGTFTRLTQEYPQSEYGRKA 650


>gi|254482551|ref|ZP_05095790.1| tol-pal system protein YbgF, putative [marine gamma proteobacterium
           HTCC2148]
 gi|214037242|gb|EEB77910.1| tol-pal system protein YbgF, putative [marine gamma proteobacterium
           HTCC2148]
          Length = 325

 Score = 54.0 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 36/82 (43%), Gaps = 6/82 (7%)

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           A+    + +++QA    ++++  YP+ K     +Y +G  Y      +  D    +   Q
Sbjct: 207 AYSLVRSQQFEQAVGAFQQFLRNYPDGKYAPNAHYWLGELY------LVIDPSDLEASRQ 260

Query: 161 YMSRIVERYTNSPYVKGARFYV 182
             + ++ +Y ++P    A + +
Sbjct: 261 AFTLLLNQYPDNPKAPDAMYKL 282



 Score = 45.1 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 51/145 (35%), Gaps = 15/145 (10%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG- 108
             +++  + + Y  A   ++ Q F +A   F Q  R++P    A  +      +      
Sbjct: 193 QASEIPGEGDAYRGAYSLVRSQQFEQAVGAFQQFLRNYPDGKYAPNAHYWLGELYLVIDP 252

Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
              + +       + QYP++       Y +G         V + +   +   +Y+ R++ 
Sbjct: 253 SDLEASRQAFTLLLNQYPDNPKAPDAMYKLG--------KVQFLKGNREKSKEYLDRVI- 303

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAK 192
               S Y       V + R+ LA  
Sbjct: 304 ----SKYGSTNSSAVQLSRDFLAEN 324



 Score = 43.6 bits (102), Expect = 0.028,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 40/105 (38%), Gaps = 12/105 (11%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           +  +  +    + +  Y +  Y   A +++      +   ++E            A+   
Sbjct: 214 QQFEQAVGAFQQFLRNYPDGKYAPNAHYWLGELYLVIDPSDLE------------ASRQA 261

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           F L+L  Y D   A +AM +L +        ++++E +  +  +Y
Sbjct: 262 FTLLLNQYPDNPKAPDAMYKLGKVQFLKGNREKSKEYLDRVISKY 306


>gi|150021658|ref|YP_001307012.1| TPR repeat-containing protein [Thermosipho melanesiensis BI429]
 gi|149794179|gb|ABR31627.1| Tetratricopeptide TPR_2 repeat protein [Thermosipho melanesiensis
           BI429]
          Length = 367

 Score = 54.0 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 41/127 (32%), Gaps = 28/127 (22%)

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE---------EYITQY 124
            KA E FN      P      + L +  +  Y    Y  + +L E          +   Y
Sbjct: 258 EKAVELFNSID---PNNIETLRFLWLMGYEYYKQKNYLMSLNLLEFVIDKSLALNFKDLY 314

Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
                +D  +Y   + Y + I D               +  +ER+  S YVK ++     
Sbjct: 315 ----FLDDAFYYRALIYYE-IGDFER-------AYSLFNDFIERFPKSIYVKHSK----Y 358

Query: 185 GRNQLAA 191
             N+L  
Sbjct: 359 FINRLGG 365



 Score = 36.6 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 31/73 (42%), Gaps = 5/73 (6%)

Query: 200 YLKRGEYVAAIPRFQLVLA-----NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
           Y K+  Y+ ++   + V+      N+ D    ++A       Y  +   + A  + +   
Sbjct: 285 YYKQKNYLMSLNLLEFVIDKSLALNFKDLYFLDDAFYYRALIYYEIGDFERAYSLFNDFI 344

Query: 255 ERYPQGYWARYVE 267
           ER+P+  + ++ +
Sbjct: 345 ERFPKSIYVKHSK 357


>gi|261403119|ref|YP_003247343.1| serine/threonine protein kinase with TPR repeats
           [Methanocaldococcus vulcanius M7]
 gi|261370112|gb|ACX72861.1| serine/threonine protein kinase with TPR repeats
           [Methanocaldococcus vulcanius M7]
          Length = 1173

 Score = 54.0 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 74/225 (32%), Gaps = 43/225 (19%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKS 96
            + S     +  + ++    E+ + A     +  ++ A + +N+  +  P          
Sbjct: 136 SKNSIAKAKIKMIENILRIEEINKTAKNLFNKGKYNDAIKLYNEALKLDPKNDVLWN--- 192

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
                 V Y+   YQ A    E+ ++  P+++      Y   +        +  D R  K
Sbjct: 193 --NCGNVYYALKDYQMALKCYEKALSLNPKNEL---AMYNKAL--------ILKDMREYK 239

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVT-VGRNQL--------------AAKEVEIGRYYL 201
             L  ++ ++     +  V   R  +     N L              A KE + G YY 
Sbjct: 240 KALSIINTLMHLNPKNEKVFELRKKIIAEIGNNLNQSDNNSKFPTLQKAVKEYKNGNYYK 299

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
                  AI      L++  +     E +  L +AY+ +    +A
Sbjct: 300 -------AIELLNQCLSSNENDT---EVLRYLGDAYLNIGNYSKA 334



 Score = 37.0 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 32/94 (34%), Gaps = 22/94 (23%)

Query: 64  AVLFLKEQNFSKAYEYFNQC------------SRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
              +L   N+SKA E FN+               ++    +  + L       Y    Y+
Sbjct: 322 GDAYLNIGNYSKALECFNKILKTNNKNVNAKNKINYVANRLKSEGL-----AHYKNRNYK 376

Query: 112 QAASLGEEYITQYPESKNVD-YVYYLVGMSYAQM 144
            A  L +EY+         D   YY   + Y ++
Sbjct: 377 DALILLDEYLK----HNKKDTEAYYFKALCYEKL 406



 Score = 35.5 bits (81), Expect = 8.6,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 24/60 (40%), Gaps = 6/60 (10%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFA-----GVARKSLLM-SAFVQYSAGKYQQAA 114
           YE   +   ++++  A +Y+    +++           +K LL   A   Y+ G Y  A 
Sbjct: 573 YEFGNILYNKRDYENAIKYYQFIEKNYTNNLKNKIICRKKDLLEKIANCYYNLGDYNNAL 632


>gi|307150089|ref|YP_003885473.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822]
 gi|306980317|gb|ADN12198.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822]
          Length = 593

 Score = 54.0 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 6/89 (6%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           Y    Y + + +   +++ KA E +NQ  +  P +  A        FV Y   KY QA  
Sbjct: 393 YLNAYYNRGLAYYHLEDYDKAIEDYNQALKLDPQSSYAYNGR---GFVYYQLKKYDQALE 449

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQM 144
              + +T  P+   + Y Y+  G+SY QM
Sbjct: 450 DYNQALTLNPQ---LIYAYWNRGLSYHQM 475


>gi|332830423|gb|EGK03051.1| hypothetical protein HMPREF9455_01301 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 998

 Score = 53.6 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 72/224 (32%), Gaps = 35/224 (15%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR--DFPFAGVARKSLLMS 100
           S  +   S     Y   +Y  A    +++N+SKA   F +         +     +L   
Sbjct: 491 SSYIAQASTKQQNYPLALYNLAYTDFQQKNYSKALTNFKKYISAETNRQSPNYPDALNRI 550

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
                    +  A S   + +   P   N DY  +                QR     + 
Sbjct: 551 GDCYLYNRNFSDAESYYSQAVNVNPA--NADYSEFQKAFVLGL--------QRNYNGKVS 600

Query: 161 YMSRIVERYTNSPYVKGA----------------------RFYVTVGRNQLAAKE-VEIG 197
            ++ ++ +Y NS Y   A                      +      ++ LA K  V++G
Sbjct: 601 ALNNMMTKYPNSQYYDNALFEKSRALVMLNKEPEAISVLEKLLKEYSKSNLAQKAGVQLG 660

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
           + Y        +I  ++ V+ NY ++E A  A+  +   Y  + 
Sbjct: 661 QLYFNTNNPQKSIAAYKEVVNNYPNSEEARTAIQSMEGVYKDIN 704



 Score = 51.7 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/229 (19%), Positives = 71/229 (31%), Gaps = 27/229 (11%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A    ++  + +A   F +             +        Y  G   +  + G +Y
Sbjct: 177 YYLAYANFQDGEYEQAIPIFRKLKNK---GEYKESATFFLVQTSYLQGNLSETVAEGRDY 233

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVP-------YDQRATKLMLQYMSRIVERYTNSP 173
           I  YP S N   VY L+G SY +             Y +  T      M ++ E Y  + 
Sbjct: 234 IATYPGSTNTAEVYRLLGNSYYRQGDARNSIVSYEKYLESTTTTFRDDMYQLAEAYYQTN 293

Query: 174 ---YVKGARFYVTVGRNQL---AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
                  A        + L   A   + +G+ YLK  +   AI  F        +   +E
Sbjct: 294 AHGNAINALKRDVASTDDLLGQAGY-MLLGQSYLKVNDMPNAIMAFDAAARTRFNKTISE 352

Query: 228 EAMARLVEAYVAL------ALMDEAREVVSLIQERYPQGYWARYVETLV 270
           EA+      YV L      +   +A          YP   +   V   +
Sbjct: 353 EALY----NYVMLMNRGGGSAFGQAITASQRFLTEYPSSKYTDEVNEAL 397



 Score = 49.0 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 67/219 (30%), Gaps = 39/219 (17%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRD-------FPFAGVARKSLLMSAFVQYSAGK 109
               + +  L  ++ N+  A   ++            +P       +L   A+  +    
Sbjct: 467 NEAYFWRGDLAYRKGNYPAAARDYSSYIAQASTKQQNYP------LALYNLAYTDFQQKN 520

Query: 110 YQQAASLGEEYIT--QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           Y +A +  ++YI+     +S N       +G  Y           R       Y S+ V 
Sbjct: 521 YSKALTNFKKYISAETNRQSPNYPDALNRIGDCYLYN--------RNFSDAESYYSQAVN 572

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
               +      +    +G  +                 Y   +     ++  Y ++++ +
Sbjct: 573 VNPANADYSEFQKAFVLGLQR----------------NYNGKVSALNNMMTKYPNSQYYD 616

Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
            A+     A V L    EA  V+  + + Y +   A+  
Sbjct: 617 NALFEKSRALVMLNKEPEAISVLEKLLKEYSKSNLAQKA 655



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 25/207 (12%), Positives = 73/207 (35%), Gaps = 45/207 (21%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           Y   ++EK+   +      +A     +  +++  + +A+K+ +    + ++    Q++ +
Sbjct: 615 YDNALFEKSRALVMLNKEPEAISVLEKLLKEYSKSNLAQKAGVQLGQLYFNTNNPQKSIA 674

Query: 116 LGEEYITQYPESKNV------------------DYVYYL----VGMSYAQMIRDV----- 148
             +E +  YP S+                     Y  Y+     G   +   +D      
Sbjct: 675 AYKEVVNNYPNSEEARTAIQSMEGVYKDINDIGSYASYVNSQGKGTVLSASRQDSLTYLA 734

Query: 149 ---PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
               Y +         ++R ++ Y N  +   A                 +G    +  +
Sbjct: 735 AENVYMKGRKDESKTALNRYLQTYPNGVFASDA--------------HFYLGSMAFEAKD 780

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMAR 232
           + +A+  F+ V+ + ++ ++ ++A+  
Sbjct: 781 FTSALGNFKEVINS-NNPKYIDDALIY 806



 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 27/221 (12%), Positives = 61/221 (27%), Gaps = 29/221 (13%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           ++V   +         +Y   +     +N+  AY  +   +     +     + L     
Sbjct: 789 KEVINSNNPKYIDDALIYASGIE-FDRKNYEAAYGAYEHLNMVASKSENKDVAQLGMLRC 847

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
            Y   K Q   +  ++ +         +   +  G S   +          ++  +  + 
Sbjct: 848 AYLMKKDQDVVAAADKLLQNKASGSVANEARFYRGQSLKNL--------GQSEKAIADLQ 899

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
            +          K  R          A  +  +   Y +   Y  A  + Q  +      
Sbjct: 900 EV---------AKDTRSAFG------AESQYLLADIYYQAKSYDKAEKQIQSFMKE--GT 942

Query: 224 EHAE---EAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            H      A+  L + Y A     +AR+ +  +Q  Y    
Sbjct: 943 PHEYWMARAIVVLSDVYAAKGDKFQARQYLESLQANYKGTE 983


>gi|307300473|ref|ZP_07580253.1| tol-pal system protein YbgF [Sinorhizobium meliloti BL225C]
 gi|307318338|ref|ZP_07597773.1| tol-pal system protein YbgF [Sinorhizobium meliloti AK83]
 gi|306896020|gb|EFN26771.1| tol-pal system protein YbgF [Sinorhizobium meliloti AK83]
 gi|306904639|gb|EFN35223.1| tol-pal system protein YbgF [Sinorhizobium meliloti BL225C]
          Length = 345

 Score = 53.6 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 45/155 (29%), Gaps = 17/155 (10%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRY---QREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
                 G     +     DS           ++Y+     +   ++S A + F      F
Sbjct: 192 TGLATQGGGLNDNPGSVPDSGQATASLSDPGDLYQAGYSHVLSGDYSIAEQEFRDYLDAF 251

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES---KNVDYVYYLVGMSYAQM 144
           P    A  +       QYS GKY  A    + ++  +           +   +GMS   +
Sbjct: 252 PSGDKAADASFWMGEAQYSQGKYSDA---AKTFLNAHQSHGKSPKAPEMLLKLGMSLGAL 308

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
                      +     +  + +RY  +     A+
Sbjct: 309 DNK--------ETACATLREVNKRYPKASPAVKAK 335



 Score = 40.9 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 36/104 (34%), Gaps = 14/104 (13%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
             Q     ++ + +      A F++   +                +G+Y  A   F    
Sbjct: 240 AEQEFRDYLDAFPSGDKAADASFWMGEAQ--------------YSQGKYSDAAKTFLNAH 285

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            ++  +  A E + +L  +  AL   + A   +  + +RYP+  
Sbjct: 286 QSHGKSPKAPEMLLKLGMSLGALDNKETACATLREVNKRYPKAS 329


>gi|296451441|ref|ZP_06893178.1| probable multiprotein complex assembly protein [Clostridium
           difficile NAP08]
 gi|296880210|ref|ZP_06904176.1| probable multiprotein complex assembly protein [Clostridium
           difficile NAP07]
 gi|296259708|gb|EFH06566.1| probable multiprotein complex assembly protein [Clostridium
           difficile NAP08]
 gi|296428799|gb|EFH14680.1| probable multiprotein complex assembly protein [Clostridium
           difficile NAP07]
          Length = 465

 Score = 53.6 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 46/132 (34%), Gaps = 9/132 (6%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           ++   +    V  + ++Y +A+   K++ + KA E F              +S+   A  
Sbjct: 330 KNKEPERKITVADEEDLYYQALDLKKKKEYEKAIENFKSIVSSGKTKKYISESIYQLAIT 389

Query: 104 QYSAGKYQQAASLGEEYITQYP-ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
               G   +A    ++YI  Y    +  D  YY +GM Y         D    K   Q  
Sbjct: 390 NKLLGNKDEAIKYYKKYINTYTKNDQYYDDSYYELGMLYY--------DNGDLKNAQQTF 441

Query: 163 SRIVERYTNSPY 174
             +     +S Y
Sbjct: 442 YSLRSEVPDSMY 453



 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 39/106 (36%), Gaps = 10/106 (9%)

Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGR----YYL-----KRGEYVAAIPRFQLVLANYSD 222
           S  ++     +   +N+   +++ +      YY      K+ EY  AI  F+ ++++   
Sbjct: 316 SKKLEKTNKELNEVKNKEPERKITVADEEDLYYQALDLKKKKEYEKAIENFKSIVSSGKT 375

Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERY-PQGYWARYVE 267
            ++  E++ +L      L   DEA +        Y     +     
Sbjct: 376 KKYISESIYQLAITNKLLGNKDEAIKYYKKYINTYTKNDQYYDDSY 421


>gi|323697805|ref|ZP_08109717.1| tol-pal system protein YbgF [Desulfovibrio sp. ND132]
 gi|323457737|gb|EGB13602.1| tol-pal system protein YbgF [Desulfovibrio desulfuricans ND132]
          Length = 319

 Score = 53.6 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 49/134 (36%), Gaps = 8/134 (5%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D    + +Y+KA    KE N+ +A  Y+ + +  F        ++       Y    Y +
Sbjct: 194 DTDPAKALYDKAYALYKEGNYERARSYWAEFTDTFKGHAFTPSAVFWQGQCYYMLKDYAR 253

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A  L E+ I +Y +S          G S+ ++           +L       I++++  +
Sbjct: 254 AVILYEDVIEKYQKSSKYKAALLRAGYSWERL--------GKPELAKMRFEEIIKKFPKT 305

Query: 173 PYVKGARFYVTVGR 186
                A+  +   +
Sbjct: 306 VEATQAKRSLDKMK 319



 Score = 53.6 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 45/135 (33%), Gaps = 22/135 (16%)

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           K+L   A+  Y  G Y++A S   E+   +          +  G  Y  M++D       
Sbjct: 199 KALYDKAYALYKEGNYERARSYWAEFTDTFKGHAFTPSAVFWQGQCYY-MLKDYAR---- 253

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
               +     ++E+Y  S   K A         +L   E+              A  RF+
Sbjct: 254 ---AVILYEDVIEKYQKSSKYKAALLRAGYSWERLGKPEL--------------AKMRFE 296

Query: 215 LVLANYSDAEHAEEA 229
            ++  +     A +A
Sbjct: 297 EIIKKFPKTVEATQA 311



 Score = 39.3 bits (91), Expect = 0.50,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 27/61 (44%)

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           Y    +Y  A+  ++ V+  Y  +   + A+ R   ++  L   + A+     I +++P+
Sbjct: 245 YYMLKDYARAVILYEDVIEKYQKSSKYKAALLRAGYSWERLGKPELAKMRFEEIIKKFPK 304

Query: 260 G 260
            
Sbjct: 305 T 305


>gi|124514248|gb|EAY55762.1| protein of unknown function [Leptospirillum rubarum]
          Length = 264

 Score = 53.6 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/136 (22%), Positives = 51/136 (37%), Gaps = 25/136 (18%)

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAA--------KE--------VEIGRYYLK- 202
           Q   ++V+ Y +S   K A  ++   +NQLA          E         +I  +Y + 
Sbjct: 106 QLFEKVVKDYPDSSSAKVAPLFLASIQNQLAQPQKAVNWLHEGLEKNSGDTKILPFYYES 165

Query: 203 -------RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
                    EY  A+  FQ V+  +     A+ A   + + Y  L     A      +Q+
Sbjct: 166 LGVTFMSMKEYDQALAMFQKVIK-FQGKTLADAAYYNIGKVYELLNQPALAILNYRKLQK 224

Query: 256 RYPQGYWARYVETLVK 271
           ++P   WA   E  +K
Sbjct: 225 KFPSSPWASEAEAYIK 240



 Score = 40.5 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 83/217 (38%), Gaps = 30/217 (13%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L    ++A   LV       +    ++     +  +++ K +   K+ ++S   + F + 
Sbjct: 53  LVGLVALAGVGLVWHIYSDKKKKEQEAAALETHAEQMFSKNMQN-KKADWSSIDQLFEKV 111

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV-DYVYYLVGMSYA 142
            +D+P +  A+ + L  A +Q    + Q+A +   E + +      +  + Y  +G+++ 
Sbjct: 112 VKDYPDSSSAKVAPLFLASIQNQLAQPQKAVNWLHEGLEKNSGDTKILPFYYESLGVTFM 171

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
            M     YDQ      L    ++++       +  A +Y              IG+ Y  
Sbjct: 172 SMK---EYDQ-----ALAMFQKVIKF--QGKTLADAAYY-------------NIGKVYEL 208

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             +   AI  ++ +   +  +  A EA     EAY+ 
Sbjct: 209 LNQPALAILNYRKLQKKFPSSPWASEA-----EAYIK 240


>gi|108758700|ref|YP_628650.1| putative lipoprotein [Myxococcus xanthus DK 1622]
 gi|108462580|gb|ABF87765.1| putative lipoprotein [Myxococcus xanthus DK 1622]
          Length = 301

 Score = 53.6 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/164 (13%), Positives = 51/164 (31%), Gaps = 23/164 (14%)

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR------ 179
              +      L   +          +QR  K  +     ++++   SP    +R      
Sbjct: 53  RHDSSPEALVLRARALKGAADVYWLEQRKVKEAVGVYRELIQQCPESPEALESRIILADL 112

Query: 180 FYVTV-----GRNQL-----------AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
             V         +QL           A     + + Y + G+Y       + V+  +  +
Sbjct: 113 LRVHYRDLRGAIDQLTAALKLNPPQGAELHYLVTKLYFELGDYQQCELETRRVMERFPTS 172

Query: 224 EHAEEAMARLVEAYVAL-ALMDEAREVVSLIQERYPQGYWARYV 266
            + ++A+    +A   +     EA    + ++ R+P    A + 
Sbjct: 173 AYVDDALYLQAQAIAMMEGRRQEASRTFADLRTRFPDSELAPHA 216



 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 32/93 (34%), Gaps = 7/93 (7%)

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
            +  G YQQ        + ++P S  VD   YL   + A M       +   +   +  +
Sbjct: 149 YFELGDYQQCELETRRVMERFPTSAYVDDALYLQAQAIAMM-------EGRRQEASRTFA 201

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
            +  R+ +S     A F +   R      E  I
Sbjct: 202 DLRTRFPDSELAPHALFEMGKLRADAGENEKAI 234



 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 63/185 (34%), Gaps = 28/185 (15%)

Query: 68  LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF---VQYSAGKYQQAASLGEEYITQY 124
           L+++   +A   + +  +  P +  A +S ++ A    V Y     + A       +   
Sbjct: 77  LEQRKVKEAVGVYRELIQQCPESPEALESRIILADLLRVHYR--DLRGAIDQLTAALKLN 134

Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
           P       ++YLV   Y ++           +       R++ER+  S YV  A +    
Sbjct: 135 P--PQGAELHYLVTKLYFEL--------GDYQQCELETRRVMERFPTSAYVDDALYLQAQ 184

Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
               +            +R E   A   F  +   + D+E A  A+  + +        +
Sbjct: 185 AIAMMEG----------RRQE---ASRTFADLRTRFPDSELAPHALFEMGKLRADAGENE 231

Query: 245 EAREV 249
           +A E 
Sbjct: 232 KAIET 236


>gi|46203194|ref|ZP_00208847.1| COG1729: Uncharacterized protein conserved in bacteria
           [Magnetospirillum magnetotacticum MS-1]
          Length = 335

 Score = 53.6 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 34/88 (38%), Gaps = 8/88 (9%)

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           ++   +A+      +Y+QA     ++I  +P  + V    Y +G SY Q  R        
Sbjct: 210 QADFEAAYALVRERQYEQAEMSLRQFIQSHPRDRLVPKATYWLGESYLQRNRS------- 262

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYV 182
            +   +   ++   Y NSP    A   +
Sbjct: 263 -REAAEQFLKVSTDYANSPIAPEAMLKL 289



 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 44/107 (41%), Gaps = 14/107 (13%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           R  +     + + ++ +     V  A +++              G  YL+R     A  +
Sbjct: 223 RQYEQAEMSLRQFIQSHPRDRLVPKATYWL--------------GESYLQRNRSREAAEQ 268

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           F  V  +Y+++  A EAM +L  +  AL    +A   ++ ++ ++P 
Sbjct: 269 FLKVSTDYANSPIAPEAMLKLGASLHALGAKAQACATLAEVERKFPS 315



 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 31/75 (41%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
             D    +  Y     +L+     +A E F + S D+  + +A +++L      ++ G  
Sbjct: 240 PRDRLVPKATYWLGESYLQRNRSREAAEQFLKVSTDYANSPIAPEAMLKLGASLHALGAK 299

Query: 111 QQAASLGEEYITQYP 125
            QA +   E   ++P
Sbjct: 300 AQACATLAEVERKFP 314


>gi|332298360|ref|YP_004440282.1| Tetratricopeptide TPR_2 repeat-containing protein [Treponema
           brennaborense DSM 12168]
 gi|332181463|gb|AEE17151.1| Tetratricopeptide TPR_2 repeat-containing protein [Treponema
           brennaborense DSM 12168]
          Length = 372

 Score = 53.6 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 51/171 (29%), Gaps = 15/171 (8%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
             +  +Y   +  +  +++  A    +     FP        L       Y  G Y +A 
Sbjct: 62  PQEESLYMLILSEMFAEDYGGALGDCDWFVTLFPGGTYYPLVLYQRGRALYYQGSYDEAV 121

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
           +   E+   YP  +      + +  S+                      R+V  +     
Sbjct: 122 AQLTEFCHLYPAHEMYPSALFWIAESFFFEYNYS--------AAKVLYERLVSDFPRDAK 173

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKR---GEYVAAIPRFQLVLANYSD 222
              ++  +      ++  E E    YL +    EY+AA   ++  L  Y  
Sbjct: 174 AVESQNRLR----SISQYEREEKLLYLLKVVGEEYLAAKESYEKELKQYRT 220



 Score = 45.5 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 59/198 (29%), Gaps = 32/198 (16%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFA 90
           VC LV     +     L    D      +  +     + +++  A  +F    +   P  
Sbjct: 9   VCALVLCVSAAG----LCVPEDKSAGSALLLQGYEAFRAEDWVSALFFFRKAVNVAAPQ- 63

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
               +SL M    +  A  Y  A    + ++T +P       V Y  G +          
Sbjct: 64  ---EESLYMLILSEMFAEDYGGALGDCDWFVTLFPGGTYYPLVLYQRGRALYY------- 113

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
            Q +    +  ++     Y        A                 I   +     Y AA 
Sbjct: 114 -QGSYDEAVAQLTEFCHLYPAHEMYPSAL--------------FWIAESFFFEYNYSAAK 158

Query: 211 PRFQLVLANYS-DAEHAE 227
             ++ +++++  DA+  E
Sbjct: 159 VLYERLVSDFPRDAKAVE 176


>gi|259909068|ref|YP_002649424.1| tol-pal system protein YbgF [Erwinia pyrifoliae Ep1/96]
 gi|224964690|emb|CAX56207.1| conserved uncharacterized protein [Erwinia pyrifoliae Ep1/96]
 gi|283479094|emb|CAY75010.1| Hypothetical protein ybgF precursor [Erwinia pyrifoliae DSM 12163]
          Length = 265

 Score = 53.6 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 43/126 (34%), Gaps = 9/126 (7%)

Query: 61  YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  AV   L+++ +  A   F    + +P +     +      + Y+ GK   AA     
Sbjct: 148 YNAAVALVLEKKQYDNAISAFQAFVKQYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFAT 207

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            + ++P+S         VG+   +                    ++++ Y+NS   K A+
Sbjct: 208 VVKKFPKSPKSADALLKVGVIMQEKGDKA--------KAKAVYQQVIKLYSNSEAAKTAQ 259

Query: 180 FYVTVG 185
                 
Sbjct: 260 KRFASL 265



 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 46/127 (36%), Gaps = 22/127 (17%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +Y  A S  + ++ QYP+S       Y +G       +              Y + +V+
Sbjct: 159 KQYDNAISAFQAFVKQYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYFATVVK 210

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
           ++  SP    A   V V                 ++G+   A   +Q V+  YS++E A+
Sbjct: 211 KFPKSPKSADALLKVGVIMQ--------------EKGDKAKAKAVYQQVIKLYSNSEAAK 256

Query: 228 EAMARLV 234
            A  R  
Sbjct: 257 TAQKRFA 263



 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 32/71 (45%), Gaps = 2/71 (2%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           L++ +Y  AI  FQ  +  Y D+ +   A   L +        D+A    + + +++P+ 
Sbjct: 156 LEKKQYDNAISAFQAFVKQYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFATVVKKFPKS 215

Query: 261 YWARYVETLVK 271
              +  + L+K
Sbjct: 216 --PKSADALLK 224



 Score = 40.5 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 30/86 (34%), Gaps = 1/86 (1%)

Query: 46  VYLDSVTDVRY-QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
            ++    D  Y     Y    L   +     A  YF    + FP +  +  +LL    + 
Sbjct: 170 AFVKQYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFATVVKKFPKSPKSADALLKVGVIM 229

Query: 105 YSAGKYQQAASLGEEYITQYPESKNV 130
              G   +A ++ ++ I  Y  S+  
Sbjct: 230 QEKGDKAKAKAVYQQVIKLYSNSEAA 255


>gi|83645384|ref|YP_433819.1| hypothetical protein HCH_02602 [Hahella chejuensis KCTC 2396]
 gi|83633427|gb|ABC29394.1| uncharacterized protein conserved in bacteria [Hahella chejuensis
           KCTC 2396]
          Length = 963

 Score = 53.6 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 61/212 (28%), Gaps = 48/212 (22%)

Query: 65  VLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARKSLLMSAFVQYSAGKYQQAA----S 115
               + + +++A + +++     P        +A       A   Y  G+   AA     
Sbjct: 579 HSQFELKQYAEAEKSYSRVLALMPANDKRRGEIAEL----LAASIYKQGELMLAANDVNG 634

Query: 116 LGEEYITQYPESK------NVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
             ++++     +       N DY    Y+               Q      +  ++   +
Sbjct: 635 AIDQFLRVGQAAPTASVRANADYDAATYM-------------LQQGQWDRAISVLNGFRQ 681

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
           RY      K     + +               Y    ++ AA     ++  ++ D E   
Sbjct: 682 RYPQHELAKDVPAKLAMA--------------YRNTEQWDAAAGELAVISQSHPDGETRR 727

Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           E++    E Y       +A +        YP+
Sbjct: 728 ESLLLSAELYEKSGQTQKAIDTYRDYANSYPE 759



 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 42/123 (34%), Gaps = 22/123 (17%)

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           +  A S  E  + +YP     D V Y +  +Y    R    D          ++R+V+ Y
Sbjct: 109 FAVAISAYEGLLKKYPNRAENDQVLYQLAKAYDLEGR---RD-----DSFNALNRLVKEY 160

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
             S Y   A+F                       G+Y A+   F+ V+   +     ++A
Sbjct: 161 PRSSYFHEAQFRRGEIL--------------FTNGDYDASQRAFESVIRGGAKTGFEQQA 206

Query: 230 MAR 232
           +  
Sbjct: 207 LYM 209



 Score = 39.7 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 29/60 (48%), Gaps = 1/60 (1%)

Query: 205 EYVA-AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
            Y A AI  ++ +L  Y +    ++ + +L +AY      D++   ++ + + YP+  + 
Sbjct: 107 AYFAVAISAYEGLLKKYPNRAENDQVLYQLAKAYDLEGRRDDSFNALNRLVKEYPRSSYF 166



 Score = 39.7 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 77/217 (35%), Gaps = 18/217 (8%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK--SLLMSAFVQYSAG 108
            +D R    +   A      +++ +A +   + ++  P    A    + L+ +  Q+   
Sbjct: 526 ASDPRAGAVMASAAEKLFAMKDYPRAIDVAQRLTQRTPPPDNASLLGAWLIISHSQFELK 585

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +Y +A       +   P +          G   A+++    Y Q    L    ++  +++
Sbjct: 586 QYAEAEKSYSRVLALMPANDK------RRGEI-AELLAASIYKQGELMLAANDVNGAIDQ 638

Query: 169 Y-TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
           +         A           A  + +   Y L++G++  AI         Y   E A+
Sbjct: 639 FLRVGQAAPTASVR--------ANADYDAATYMLQQGQWDRAISVLNGFRQRYPQHELAK 690

Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
           +  A+L  AY      D A   +++I + +P G   R
Sbjct: 691 DVPAKLAMAYRNTEQWDAAAGELAVISQSHPDGETRR 727



 Score = 38.6 bits (89), Expect = 0.97,   Method: Composition-based stats.
 Identities = 16/122 (13%), Positives = 35/122 (28%), Gaps = 8/122 (6%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           + T        Y+ A   L++  + +A    N   + +P   +A+      A    +  +
Sbjct: 646 APTASVRANADYDAATYMLQQGQWDRAISVLNGFRQRYPQHELAKDVPAKLAMAYRNTEQ 705

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           +  AA         +P+ +       L    Y +           T+  +         Y
Sbjct: 706 WDAAAGELAVISQSHPDGETRRESLLLSAELYEKS--------GQTQKAIDTYRDYANSY 757

Query: 170 TN 171
             
Sbjct: 758 PE 759


>gi|283780238|ref|YP_003370993.1| hypothetical protein Psta_2464 [Pirellula staleyi DSM 6068]
 gi|283438691|gb|ADB17133.1| Tetratricopeptide domain protein [Pirellula staleyi DSM 6068]
          Length = 638

 Score = 53.6 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 10/123 (8%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           +A    + +    A   F    R +P +  A  + L +A V     +Y++A SL    I 
Sbjct: 244 RARQLQQARQLDAAIAQFTAIYRQYPNSPQAPLAKLGAARVHLEQKQYREAESLLAS-ID 302

Query: 123 QYPES-KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
           +   +  N+D V Y  G + A M               +   R+ + + +S Y   A + 
Sbjct: 303 ENGANVTNLDAVLYERGWALAMM--------EVLTKSDELFQRLHKEFPHSIYWADATYR 354

Query: 182 VTV 184
           +  
Sbjct: 355 LAE 357


>gi|332709397|ref|ZP_08429359.1| hypothetical protein LYNGBM3L_39350 [Lyngbya majuscula 3L]
 gi|332351943|gb|EGJ31521.1| hypothetical protein LYNGBM3L_39350 [Lyngbya majuscula 3L]
          Length = 932

 Score = 53.6 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 73/203 (35%), Gaps = 27/203 (13%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKE--QNFSKAYEYFNQCSRDFPFAGVARKS 96
           + Q+ +D  L  + ++         A   L E  QN     E   +   + P   +    
Sbjct: 583 DAQTEKDKILQQLAEISPT----SIAEAALSEVLQNTQTLTEQLERLKSNHPKLFLNPDD 638

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
            +      +S G+YQ A +  ++ +   P + ++   +Y  GM+  ++        +  +
Sbjct: 639 YVNQGNTLFSQGQYQDAIASYDQVLDLQPNNPDI---WYQRGMALWEL--------QQYQ 687

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY----LKRGEYVAAIPR 212
             +    +++E   + P    + +   +   +L   E  +  +      K   Y A + R
Sbjct: 688 DAIASYDKVIEIKPDDP---DSWYQRGLALMELRRYEGAVVAFNKVVKFKPDHYKAWLNR 744

Query: 213 FQLV--LANYSDAEH-AEEAMAR 232
              +  L  Y DA    ++A+  
Sbjct: 745 GMTLRRLRRYEDAIASYDKALEI 767


>gi|145219966|ref|YP_001130675.1| tetratricopeptide domain-containing protein [Prosthecochloris
           vibrioformis DSM 265]
 gi|145206130|gb|ABP37173.1| Tetratricopeptide domain protein [Chlorobium phaeovibrioides DSM
           265]
          Length = 269

 Score = 53.6 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/133 (13%), Positives = 41/133 (30%), Gaps = 8/133 (6%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S         ++ +         ++ A E F+   ++ P + +A  +    A   ++   
Sbjct: 144 SAPPAAGGSTLFNEGAQLFSNGRYAPAREKFSVLLKESPQSELADDAQFFIAESWFAEKV 203

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y +A    +  I +Y +S       +    ++  +                    +V  Y
Sbjct: 204 YDKAILDYQVVIAKYTKSNKRPAALFKQARAFELLGDGAN--------AKTRYRDLVNVY 255

Query: 170 TNSPYVKGARFYV 182
             SP    AR  +
Sbjct: 256 PKSPEADLARKKM 268



 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 34/104 (32%), Gaps = 14/104 (13%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
             +  S +++    S     A+                I   +     Y  AI  +Q+V+
Sbjct: 170 AREKFSVLLKESPQSELADDAQ--------------FFIAESWFAEKVYDKAILDYQVVI 215

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           A Y+ +     A+ +   A+  L     A+     +   YP+  
Sbjct: 216 AKYTKSNKRPAALFKQARAFELLGDGANAKTRYRDLVNVYPKSP 259


>gi|302421120|ref|XP_003008390.1| serine/threonine-protein phosphatase [Verticillium albo-atrum
           VaMs.102]
 gi|261351536|gb|EEY13964.1| serine/threonine-protein phosphatase [Verticillium albo-atrum
           VaMs.102]
          Length = 478

 Score = 53.6 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/150 (10%), Positives = 44/150 (29%), Gaps = 23/150 (15%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSA 107
            T       +  +      E ++  A  ++ +    +   P      ++          A
Sbjct: 2   ATPEEQATALKNQGNKAFAEHDWPTAISFYTKAIDLNDKEP-TYFTNRAQ-----AHIKA 55

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
             Y  A +  ++ +   P    +   ++  G+++  +IR         K  L+     + 
Sbjct: 56  ESYGYAIADCDKALALNP---KLVKAHFRRGLAHTAIIR--------PKEALKDFRECIR 104

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
              N+     A+  +   +  +   +    
Sbjct: 105 IDPNNK---DAKLKLDECKKIVRKLDFFAA 131


>gi|218246150|ref|YP_002371521.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801]
 gi|218166628|gb|ACK65365.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801]
          Length = 878

 Score = 53.6 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 68/225 (30%), Gaps = 48/225 (21%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ- 104
           V+  SV   +   +++++     K   +++A   F +     P            A    
Sbjct: 18  VFTPSVVLSQSIDQLFQQGRTAGKMGKYTEAEAIFRRVIELDP----------NLADAYN 67

Query: 105 ------YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
                 Y  GK  +A +  ++ I   P   +               + +   DQ   +  
Sbjct: 68  NLGNALYYQGKLDEAIAAYQKAIQLNPNDADA-----------YNNLGNALSDQGKLEEA 116

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY-------------YLKRGE 205
           +    + ++   N  Y   A + + +  +     E  I  Y             Y   G 
Sbjct: 117 IAAYQKAIQLNPN--YA-DAYYNLGIALSDQGKLEEAIAAYQKAIQLNPNFTQAYYNLGI 173

Query: 206 YVAAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEA 246
            ++   + +  +A Y  A     +  +A   L  A      +DEA
Sbjct: 174 ALSDQGKLEEAIAAYQKAIQLNPNYADAYYNLGNALFDQGKLDEA 218



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 36/116 (31%), Gaps = 14/116 (12%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           Y    Y        +    +A   + +  +  P       +        Y  GK ++A +
Sbjct: 198 YADAYYNLGNALFDQGKLDEAIAAYQKAIQLDPNDA---NAYNNLGAALYKQGKLEEAIA 254

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
             ++ I   P   N+   Y  +G++ +        DQ      +    + ++   N
Sbjct: 255 AYQKAIQLNP---NLAEAYNNLGVALS--------DQGKRDEAIAAYQKAIQLNPN 299



 Score = 38.9 bits (90), Expect = 0.82,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 34/110 (30%), Gaps = 14/110 (12%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
              +    +    +A   + +  +  P    A  +        YS GK ++A +  ++ I
Sbjct: 442 NLGLALRNQGKRDEAITAYQKAIQLNP--NFA-LAYNNLGNALYSQGKREEAIAAYQKAI 498

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
              P             ++Y  +   +  DQ      +    + ++   N
Sbjct: 499 QLNPNF----------ALAYNNLGNALS-DQGKRDEAIAAYQKAIQLNPN 537


>gi|57237956|ref|YP_179205.1| putative lipoprotein [Campylobacter jejuni RM1221]
 gi|57166760|gb|AAW35539.1| lipoprotein, putative [Campylobacter jejuni RM1221]
 gi|315058515|gb|ADT72844.1| Putative lipoprotein [Campylobacter jejuni subsp. jejuni S3]
          Length = 215

 Score = 53.6 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 70/179 (39%), Gaps = 18/179 (10%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L +F S+   F      ++   +Y  S ++       Y++ +  L++++  KA +++N  
Sbjct: 7   LLVFLSV---FFSACSTKNDEGLYNLSASEW------YKQIIKDLQDKDLEKADDHYNGM 57

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
           + +     +   +L++ A       +Y+ A    +EY  ++  S+N DY+ YL   +   
Sbjct: 58  ASEHVADPLLETTLIILAQAHMDEEEYKLAEFYLDEYNKKFGNSRNADYIRYLKIKAKFD 117

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
                  +Q       + +   ++ Y  + Y    +  +T            +  +YL 
Sbjct: 118 AFAVPNRNQALMLESQKEIDTFLKDYPYTKYEPLVQTMLTK---------FNLAVFYLN 167


>gi|313886111|ref|ZP_07819846.1| tetratricopeptide repeat protein [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|312924457|gb|EFR35231.1| tetratricopeptide repeat protein [Porphyromonas asaccharolytica
           PR426713P-I]
          Length = 1003

 Score = 53.6 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 55/175 (31%), Gaps = 30/175 (17%)

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
                Y  G Y  A    EE     P+++   Y  Y+        + D+   ++  K  +
Sbjct: 545 LGDAHYMQGHYTPAVRYYEEAYRLAPDNQ--VYALYM--------LSDIEGLKKDYKAQI 594

Query: 160 QYMSRIVERYTNSPYVKGARF---YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             + ++V R+ NS Y   A +          Q A                  AI  F  +
Sbjct: 595 AALDKLVARHPNSLYKPRAMYDQGRAMELSGQQAE-----------------AIGAFTRL 637

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
              Y  +E+  +A  +L   Y        A E    +    PQ   A+     +K
Sbjct: 638 TQEYPQSEYGRKAALQLALLYYNRNETSRAIETYKALLAEAPQSGEAKQAYEALK 692



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 34/78 (43%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
            R +Y++          ++A   F + ++++P +   RK+ L  A + Y+  +  +A   
Sbjct: 611 PRAMYDQGRAMELSGQQAEAIGAFTRLTQEYPQSEYGRKAALQLALLYYNRNETSRAIET 670

Query: 117 GEEYITQYPESKNVDYVY 134
            +  + + P+S      Y
Sbjct: 671 YKALLAEAPQSGEAKQAY 688



 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 11/111 (9%), Positives = 33/111 (29%), Gaps = 8/111 (7%)

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
           ++++       ++     P +    +++         +G+  +A         +YP+S+ 
Sbjct: 587 KKDYKAQIAALDKLVARHPNSLYKPRAMYDQGRAMELSGQQAEAIGAFTRLTQEYPQSEY 646

Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
                  + + Y             T   ++    ++     S   K A  
Sbjct: 647 GRKAALQLALLYYNR--------NETSRAIETYKALLAEAPQSGEAKQAYE 689



 Score = 35.5 bits (81), Expect = 8.6,   Method: Composition-based stats.
 Identities = 24/214 (11%), Positives = 58/214 (27%), Gaps = 44/214 (20%)

Query: 64  AVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQA--------- 113
           A L  ++  + +A +      S+    +   + +  +  + Q    +Y  A         
Sbjct: 470 AQLLSQQGAYKQAAQALTAILSKRAASSKQLQIARYLLGYSQIRQQQYGAATQTLSILLQ 529

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
               +  +        +   +Y+               Q      ++Y         ++ 
Sbjct: 530 EGTLDNTLQAD-VHARLGDAHYM---------------QGHYTPAVRYYEEAYRLAPDNQ 573

Query: 174 -YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
            Y       +   +                  +Y A I     ++A + ++ +   AM  
Sbjct: 574 VYALYMLSDIEGLK-----------------KDYKAQIAALDKLVARHPNSLYKPRAMYD 616

Query: 233 LVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
              A        EA    + + + YPQ  + R  
Sbjct: 617 QGRAMELSGQQAEAIGAFTRLTQEYPQSEYGRKA 650


>gi|195953482|ref|YP_002121772.1| Tetratricopeptide TPR_2 repeat protein [Hydrogenobaculum sp.
           Y04AAS1]
 gi|195933094|gb|ACG57794.1| Tetratricopeptide TPR_2 repeat protein [Hydrogenobaculum sp.
           Y04AAS1]
          Length = 272

 Score = 53.6 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 58/158 (36%), Gaps = 32/158 (20%)

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
                 + P +    + L   A+  Y +G YQ+A  L +E+I + P SK  +  YY +GM
Sbjct: 136 LQALISNTPQSP---QELYGMAYTAYQSGDYQKAKRLFKEFILKNPHSKLTNNAYYWLGM 192

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVER-----YTNSPYVKGARFYVTVGRNQLAAKEV 194
           +   M              L  +  ++++       +      A                
Sbjct: 193 AEKAMH--------HNNEALAILLSLIDKCKKGELPSCDKAPSAY--------------F 230

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
                Y + G+  AAI  ++ ++  Y ++   E A+AR
Sbjct: 231 SAANIYREMGQKSAAINLYKELIKLYPNS--IEAALAR 266



 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 47/162 (29%), Gaps = 27/162 (16%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
            SS ++        +  +E+Y  A    +  ++ KA   F +     P + +   +    
Sbjct: 131 SSSSNLQALISNTPQSPQELYGMAYTAYQSGDYQKAKRLFKEFILKNPHSKLTNNAYYWL 190

Query: 101 AFV----QYSAGKYQQAASLGEEYIT--QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
                   ++        SL ++       P        Y+     Y +M +        
Sbjct: 191 GMAEKAMHHNNEALAILLSLIDKCKKGEL-PSCDKAPSAYFSAANIYREMGQKS------ 243

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
               +     +++ Y NS                LA  E+EI
Sbjct: 244 --AAINLYKELIKLYPNSIEAA------------LARSELEI 271


>gi|218782963|ref|YP_002434281.1| hypothetical protein Dalk_5143 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218764347|gb|ACL06813.1| conserved hypothetical protein [Desulfatibacillum alkenivorans
           AK-01]
          Length = 317

 Score = 53.2 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 35/98 (35%), Gaps = 8/98 (8%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           S L  A   +S G+Y +A S    ++  +P           +G SY      +  D    
Sbjct: 42  SQLAFAESNFSQGEYYRAVSEYRRFLYFFPNDDRAPQAALRIGQSYY-----LGQDYEEA 96

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
           +  L+ M+    +Y  SP    A   +     ++   E
Sbjct: 97  QKALKSMAA---QYPQSPLAAEASLLICQCSVKIQDYE 131



 Score = 48.6 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 24/70 (34%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A     +  + +A   + +    FP    A ++ L      Y    Y++A    +    Q
Sbjct: 47  AESNFSQGEYYRAVSEYRRFLYFFPNDDRAPQAALRIGQSYYLGQDYEEAQKALKSMAAQ 106

Query: 124 YPESKNVDYV 133
           YP+S      
Sbjct: 107 YPQSPLAAEA 116



 Score = 40.9 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 37/81 (45%)

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           A  ++        +GEY  A+  ++  L  + + + A +A  R+ ++Y      +EA++ 
Sbjct: 40  ADSQLAFAESNFSQGEYYRAVSEYRRFLYFFPNDDRAPQAALRIGQSYYLGQDYEEAQKA 99

Query: 250 VSLIQERYPQGYWARYVETLV 270
           +  +  +YPQ   A     L+
Sbjct: 100 LKSMAAQYPQSPLAAEASLLI 120



 Score = 40.1 bits (93), Expect = 0.31,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 35/109 (32%), Gaps = 14/109 (12%)

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
             + Q      +    R +  + N      A                 IG+ Y    +Y 
Sbjct: 49  SNFSQGEYYRAVSEYRRFLYFFPNDDRAPQAALR--------------IGQSYYLGQDYE 94

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            A    + + A Y  +  A EA   + +  V +   +EAR  +S + + 
Sbjct: 95  EAQKALKSMAAQYPQSPLAAEASLLICQCSVKIQDYEEARTCLSDVVQN 143



 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 9/64 (14%), Positives = 24/64 (37%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
             D R  +        +   Q++ +A +     +  +P + +A ++ L+          Y
Sbjct: 71  PNDDRAPQAALRIGQSYYLGQDYEEAQKALKSMAAQYPQSPLAAEASLLICQCSVKIQDY 130

Query: 111 QQAA 114
           ++A 
Sbjct: 131 EEAR 134


>gi|260219496|emb|CBA26341.1| hypothetical protein Csp_E34290 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 264

 Score = 53.2 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 49/133 (36%), Gaps = 8/133 (6%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
              ++  +E A+   ++ +F+ A   F      +P +G    SL      QY+   Y+ A
Sbjct: 140 EPSEKRDFEAALAVFRKGDFATAQSVFLDFLNRYPTSGYRPSSLFWLGSAQYATKDYKDA 199

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
            +     + Q  +         L+ ++  Q       + + TK   + +  ++  Y +S 
Sbjct: 200 QANFRSLVQQSGDHLRAPEA--LLALANCQS------ELKDTKAARKTLEELIASYPSSE 251

Query: 174 YVKGARFYVTVGR 186
               A+  +   +
Sbjct: 252 AASAAKDRLARLK 264



 Score = 40.1 bits (93), Expect = 0.38,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 31/104 (29%), Gaps = 14/104 (13%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
                   + RY  S Y   + F++   +                  +Y  A   F+ ++
Sbjct: 162 AQSVFLDFLNRYPTSGYRPSSLFWLGSAQ--------------YATKDYKDAQANFRSLV 207

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
               D   A EA+  L      L     AR+ +  +   YP   
Sbjct: 208 QQSGDHLRAPEALLALANCQSELKDTKAARKTLEELIASYPSSE 251



 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 51/147 (34%), Gaps = 22/147 (14%)

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
           FA  + K    +A   +  G +  A S+  +++ +YP S       + +G +        
Sbjct: 138 FAEPSEKRDFEAALAVFRKGDFATAQSVFLDFLNRYPTSGYRPSSLFWLGSAQYAT---- 193

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
               +  K        +V++  +      A   +   +++L               +  A
Sbjct: 194 ----KDYKDAQANFRSLVQQSGDHLRAPEALLALANCQSEL--------------KDTKA 235

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVE 235
           A    + ++A+Y  +E A  A  RL  
Sbjct: 236 ARKTLEELIASYPSSEAASAAKDRLAR 262


>gi|332300508|ref|YP_004442429.1| Tetratricopeptide TPR_2 repeat-containing protein [Porphyromonas
           asaccharolytica DSM 20707]
 gi|332177571|gb|AEE13261.1| Tetratricopeptide TPR_2 repeat-containing protein [Porphyromonas
           asaccharolytica DSM 20707]
          Length = 1003

 Score = 53.2 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 55/175 (31%), Gaps = 30/175 (17%)

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
                Y  G Y  A    EE     P+++   Y  Y+        + D+   ++  K  +
Sbjct: 545 LGDAHYMQGHYTPAVRYYEEAYRLAPDNQ--VYALYM--------LSDIEGLKKDYKAQI 594

Query: 160 QYMSRIVERYTNSPYVKGARF---YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             + ++V R+ NS Y   A +          Q A                  AI  F  +
Sbjct: 595 AALDKLVARHPNSLYKPRAMYDQGRAMELSGQQAE-----------------AIGAFTRL 637

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
              Y  +E+  +A  +L   Y        A E    +    PQ   A+     +K
Sbjct: 638 TQEYPQSEYGRKAALQLALLYYNRNETSRAIETYKALLAEAPQSGEAKQAYEALK 692



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 34/78 (43%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
            R +Y++          ++A   F + ++++P +   RK+ L  A + Y+  +  +A   
Sbjct: 611 PRAMYDQGRAMELSGQQAEAIGAFTRLTQEYPQSEYGRKAALQLALLYYNRNETSRAIET 670

Query: 117 GEEYITQYPESKNVDYVY 134
            +  + + P+S      Y
Sbjct: 671 YKALLAEAPQSGEAKQAY 688



 Score = 44.3 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 11/111 (9%), Positives = 33/111 (29%), Gaps = 8/111 (7%)

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
           ++++       ++     P +    +++         +G+  +A         +YP+S+ 
Sbjct: 587 KKDYKAQIAALDKLVARHPNSLYKPRAMYDQGRAMELSGQQAEAIGAFTRLTQEYPQSEY 646

Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
                  + + Y             T   ++    ++     S   K A  
Sbjct: 647 GRKAALQLALLYYNR--------NETSRAIETYKALLAEAPQSGEAKQAYE 689



 Score = 35.5 bits (81), Expect = 9.1,   Method: Composition-based stats.
 Identities = 24/214 (11%), Positives = 58/214 (27%), Gaps = 44/214 (20%)

Query: 64  AVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQA--------- 113
           A L  ++  + +A +      S+    +   + +  +  + Q    +Y  A         
Sbjct: 470 AQLLSQQGAYKQAAQALTAILSKRAASSKQLQIARYLLGYSQIRQQQYGAATQTLSILLQ 529

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
               +  +        +   +Y+               Q      ++Y         ++ 
Sbjct: 530 EGTLDNTLQAD-VHARLGDAHYM---------------QGHYTPAVRYYEEAYRLAPDNQ 573

Query: 174 -YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
            Y       +   +                  +Y A I     ++A + ++ +   AM  
Sbjct: 574 VYALYMLSDIEGLK-----------------KDYKAQIAALDKLVARHPNSLYKPRAMYD 616

Query: 233 LVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
              A        EA    + + + YPQ  + R  
Sbjct: 617 QGRAMELSGQQAEAIGAFTRLTQEYPQSEYGRKA 650


>gi|119356693|ref|YP_911337.1| membrane lipoprotein lipid attachment site [Chlorobium
           phaeobacteroides DSM 266]
 gi|119354042|gb|ABL64913.1| membrane lipoprotein lipid attachment site [Chlorobium
           phaeobacteroides DSM 266]
          Length = 256

 Score = 53.2 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 49/144 (34%), Gaps = 8/144 (5%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
             + S+   +  +  V   + + +  +  L   N S A   F+   +++P + +   +  
Sbjct: 121 SAKESQVQPVSPLASVMTDKALLDDGIKKLASNNASGARGSFSLLMKNYPKSELVDDAQF 180

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
             A    S   Y++A    +  I +Y +S       Y  G+++  +              
Sbjct: 181 YVAESYLSEKWYEKAVLEYQVVIAKYTKSNKRAVALYKQGLAFELL--------GDAVNA 232

Query: 159 LQYMSRIVERYTNSPYVKGARFYV 182
                 ++  Y  S   K A+  +
Sbjct: 233 KARFRDVINIYPASAEAKLAKQKL 256



 Score = 43.6 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 38/110 (34%), Gaps = 14/110 (12%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
                S +++ Y  S  V  A+                +   YL    Y  A+  +Q+V+
Sbjct: 158 ARGSFSLLMKNYPKSELVDDAQ--------------FYVAESYLSEKWYEKAVLEYQVVI 203

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
           A Y+ +     A+ +   A+  L     A+     +   YP    A+  +
Sbjct: 204 AKYTKSNKRAVALYKQGLAFELLGDAVNAKARFRDVINIYPASAEAKLAK 253


>gi|288942398|ref|YP_003444638.1| TPR repeat-containing protein [Allochromatium vinosum DSM 180]
 gi|288897770|gb|ADC63606.1| TPR repeat-containing protein [Allochromatium vinosum DSM 180]
          Length = 482

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 36/120 (30%), Gaps = 17/120 (14%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y + V   +E ++ +A   F             + +       ++  G Y  AA   E  
Sbjct: 54  YRRGVALYREGDYRQAEHAF----SQAQGGAFDQAARYNLGNTRFKLGDYTGAAEAYESV 109

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +   P  ++  Y      ++ A +           +L  +      E+  +      AR 
Sbjct: 110 LATNPSHEDAAYNL---ALTRAML----------ARLEQEQFREQTEQKPDDKKADDARQ 156


>gi|148926023|ref|ZP_01809709.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni CG8486]
 gi|145845502|gb|EDK22594.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni CG8486]
          Length = 217

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 72/183 (39%), Gaps = 18/183 (9%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
            ++ L +F S+   F      ++   +Y  S ++       Y++ +  L++++  KA ++
Sbjct: 5   KRYFLLVFLSV---FFSACSTKNDEGLYNLSASEW------YKQIIKDLQDKDLEKADDH 55

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
           +N  + +     +   +L++ A       +Y+ A    +EY  ++  S+N DY+ YL   
Sbjct: 56  YNGMASEHVADPLLETTLIILAQAHMDEEEYKLAEFYLDEYNKKFGNSRNADYIRYLKIK 115

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           +          +Q       + +   ++ Y  + Y    +  +T            +  +
Sbjct: 116 AKFDAFAVPNRNQALMLESQKEIDTFLKDYPYTKYEPLVQTMLTK---------FNLAVF 166

Query: 200 YLK 202
           YL 
Sbjct: 167 YLN 169


>gi|303248254|ref|ZP_07334517.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio
           fructosovorans JJ]
 gi|302490392|gb|EFL50303.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio
           fructosovorans JJ]
          Length = 1000

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 65/238 (27%), Gaps = 38/238 (15%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVA 93
            G    +  +       D      +  +A       N+  A           P     + 
Sbjct: 333 AGKPHGAEGETPPPVEEDHDANVLIAAQAEKL--AGNYETAKNMLINLKN-APGLKPELR 389

Query: 94  RKSLLMSAFVQ---YSAG---KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
            ++L   A +    Y       Y +      E +     S  V      +GM   +    
Sbjct: 390 EETLHTLAGLYIDMYKDDPVAHYDEIQGALLEAMNANTNSYRVPEALLQLGMLNLRA--- 446

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
                        Y + +  +Y        A   +              G YY  RGEY 
Sbjct: 447 -----GNLPEAKGYFNVLTRKYP-----TDANVPLIN---------FYWGEYYFDRGEYK 487

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
            A   ++ ++  + ++++  E    L +  V L    EA ++       Y    W RY
Sbjct: 488 KAAKEYKDLIEKFPESKYVREGAMGLSKTLVRLGQYKEASQIA-----DYINKRWPRY 540



 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 64/190 (33%), Gaps = 32/190 (16%)

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
            ++LL    +   AG   +A         +YP   NV        +       +  +D+ 
Sbjct: 433 PEALLQLGMLNLRAGNLPEAKGYFNVLTRKYPTDANVP-------LINF-YWGEYYFDRG 484

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE--IGRYYLKR--GEYV-- 207
             K   +    ++E++  S YV+     ++    +L   +    I  Y  KR    YV  
Sbjct: 485 EYKKAAKEYKDLIEKFPESKYVREGAMGLSKTLVRLGQYKEASQIADYINKRWPRYYVEF 544

Query: 208 AAIPR-----------FQLVLANY-------SDAEHAEEAMARLVEAYVALALMDEAREV 249
             I R           F+    +Y         A+  +  +ARL + Y  L     A + 
Sbjct: 545 PTILRIDGDIAYKNGDFKKARDDYLTFYNMTPKAKDTDLVLARLGDIYAKLGKRPAAVDF 604

Query: 250 VSLIQERYPQ 259
            ++  + YP 
Sbjct: 605 YNMAVKDYPN 614



 Score = 43.6 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 21/52 (40%)

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           +    RD P + +A  + +  A        Y ++      ++ +YP+++   
Sbjct: 655 YEGIIRDHPNSPLAPLAQIKLAMWHLYRQNYPESLKAAARFLERYPKNELAP 706



 Score = 40.9 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 63/201 (31%), Gaps = 13/201 (6%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
              +  K  +F KA + +       P A      L     +    GK   A       + 
Sbjct: 551 DGDIAYKNGDFKKARDDYLTFYNMTPKAKDTDLVLARLGDIYAKLGKRPAAVDFYNMAVK 610

Query: 123 QYPESKNVDYVYYLVGM-SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
            YP  +         G+ +  ++     +DQ     M     +  +    + Y    R +
Sbjct: 611 DYPNQEG--------GLIAKMRLAEQGVHDQPTVSEMFSLFDKPQQESPETIYEGIIRDH 662

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL- 240
                  LA   +++  ++L R  Y  ++      L  Y   E A +A    V A+  + 
Sbjct: 663 PNSPLAPLAQ--IKLAMWHLYRQNYPESLKAAARFLERYPKNELAPKAEEVAVTAFEKMA 720

Query: 241 ALMDEAREVVSLIQERYPQGY 261
             + + ++   L+   Y    
Sbjct: 721 GDLIDHKDYPRLVAA-YKDNP 740


>gi|94264087|ref|ZP_01287886.1| Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1]
 gi|93455503|gb|EAT05693.1| Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1]
          Length = 703

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 57/131 (43%), Gaps = 14/131 (10%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF------VQYSAG 108
              +E++E+A   ++      A   + Q  R F  + +A+++L  +A        +    
Sbjct: 52  DSAQELWERAAAAIEADEPLTAARNYEQIHRQFGQSELAQEALWQAAELRRQLAAKEEDP 111

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
            +Q+  +L   Y  +YP+S   +  Y  +G+++ QM        R  +  L Y     +R
Sbjct: 112 DWQRVRNLYRRYTVEYPDSHRREQAYLELGLAHFQM--------RFLREALTYFRLFEQR 163

Query: 169 YTNSPYVKGAR 179
           Y +SP +  AR
Sbjct: 164 YPDSPLLPRAR 174



 Score = 42.4 bits (99), Expect = 0.072,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 40/104 (38%), Gaps = 8/104 (7%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
             +   +I  ++  S   + A +     R QLAAKE        +  ++      ++   
Sbjct: 73  AARNYEQIHRQFGQSELAQEALWQAAELRRQLAAKE--------EDPDWQRVRNLYRRYT 124

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             Y D+   E+A   L  A+  +  + EA     L ++RYP   
Sbjct: 125 VEYPDSHRREQAYLELGLAHFQMRFLREALTYFRLFEQRYPDSP 168


>gi|32267088|ref|NP_861120.1| paralysed flagella protein PflA [Helicobacter hepaticus ATCC 51449]
 gi|32263140|gb|AAP78186.1| paralysed flagella protein PflA [Helicobacter hepaticus ATCC 51449]
          Length = 789

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 52/131 (39%), Gaps = 13/131 (9%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ--YSA-GKYQQAASLG 117
           Y +    +  QN+ +A +  ++    +P    A+  LL        + +         +G
Sbjct: 185 YSQIKTLMNNQNYIEAVKLIDETLIGYPKTIFAKDLLLFRLRALESFDSVENSDMIVDMG 244

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
            ++I +YP   NV  V Y +G +YA        D R  +    Y  R +  Y NS Y+  
Sbjct: 245 TKWIKKYPTDANVPEVLYYLGNAYA--------DMRIPQEAKYYFDRTISEYPNSRYMPL 296

Query: 178 ARFYVTVGRNQ 188
           A   + + +N 
Sbjct: 297 A--KMALAKNF 305



 Score = 39.3 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 16/46 (34%)

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           +  Y    +  E +  L  AY  + +  EA+         YP   +
Sbjct: 248 IKKYPTDANVPEVLYYLGNAYADMRIPQEAKYYFDRTISEYPNSRY 293


>gi|308274171|emb|CBX30770.1| hypothetical protein N47_E42820 [uncultured Desulfobacterium sp.]
          Length = 765

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/220 (11%), Positives = 80/220 (36%), Gaps = 37/220 (16%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           ++    +  D++    +   A  ++ ++ + +  +   +  +  P    +++ L++   +
Sbjct: 299 KETVDKNPQDIKALSRL---ASFYIDDKKYDEGMKETEKILKINP---KSQEGLVLKGRL 352

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
                K+ +A SL + ++    ++      YYL+ M++           + T+     ++
Sbjct: 353 YLVRNKFTEAQSLFQSFLK---DNPKAALGYYLLAMAHYGN--------KETQQAKTALA 401

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
             ++   N+ + +                   +   Y++ G Y  A+     VL      
Sbjct: 402 EAIKL--NTKWSEPR---------------FLLANIYMREGAYSEAVNEAMGVLKEQPK- 443

Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
               +A   +  +Y+    + EA++    + +  P   +A
Sbjct: 444 --NPKAYLIMGNSYLMQKNIPEAQKSFEELLKIAPNNPFA 481



 Score = 39.3 bits (91), Expect = 0.60,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 73/213 (34%), Gaps = 39/213 (18%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
              +L ++N  +A + F +  +  P      ++   LM         K ++A    E+ +
Sbjct: 452 GNSYLMQKNIPEAQKSFEELLKIAPNNPFAYSQMGRLMLV-----EKKEKEALENFEKAL 506

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              P     DY   L      Q I  V  + +  K   + +   ++    +P++   R  
Sbjct: 507 KLQP-----DYTEPL------QFIVSVMMNNKDYKKAFERVDEQIKISPKNPFLYNIRAS 555

Query: 182 VTVGRNQL--AAKE---------------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +      L  A  +               + +G +YL+      A   ++  +    D+ 
Sbjct: 556 LYEFEKDLTNAENDFKKAIELNRDSPALQMALGNFYLRHKTMDKAKKSYEETIKKAPDSL 615

Query: 225 HAEEAMARLVEAYVALALMDEAR-EVVSLIQER 256
           +A+ A+  +   Y      DEA+     +++  
Sbjct: 616 NAQMALGMI---YENEKKYDEAKSHYEKVLKIN 645


>gi|294783466|ref|ZP_06748790.1| tetratricopeptide repeat family protein [Fusobacterium sp.
           1_1_41FAA]
 gi|294480344|gb|EFG28121.1| tetratricopeptide repeat family protein [Fusobacterium sp.
           1_1_41FAA]
          Length = 936

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 74/186 (39%), Gaps = 16/186 (8%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           +  YQ+ ++     FL + N   A + +     + +      +++++    V Y+   Y 
Sbjct: 123 EKTYQKTLFAVGQDFLSKDNNEAARDVYREIIDKKY---ENNKEAMMGLGIVNYNLKDYD 179

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           +A     E+    P+ +N D V YL   ++ +           T+  ++   ++      
Sbjct: 180 KAIYWLSEFQRAKPK-ENKDMVSYLKASAFYRK--------GNTEQAIEDFEKLANISPA 230

Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN-YSDAEHAEEAM 230
           + Y K A  Y+    +    K+ E   +YL++ +          ++ + Y   E+ ++A+
Sbjct: 231 NDYSKKAVLYLIEIYSN--KKDEEKVSFYLEKIKGTKEYNTAMTMIGDLYVTKENYDKAL 288

Query: 231 ARLVEA 236
           A   ++
Sbjct: 289 AYYNQS 294



 Score = 42.0 bits (98), Expect = 0.098,   Method: Composition-based stats.
 Identities = 46/246 (18%), Positives = 83/246 (33%), Gaps = 31/246 (12%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
             S  +  L+  ++    + YL SV+D       Y K V  +  + + +A  +F      
Sbjct: 476 IISSLMSSLLDQQKYDEMNQYLSSVSDDNSLN--YLKGVAAMGLKKYDEAETHFQNVLSS 533

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI-TQYPESKNVDYVYYL--VGMSYAQ 143
                ++ K  L      + A +Y +A   GE+Y+    P+ +   Y   L  +G+SY +
Sbjct: 534 GDQG-LSTKVYLNRVRNFFLAERYNEAIQAGEQYLTRINPDKEKAIYSEMLDKIGLSYFR 592

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
           + +   YDQ                   S Y K A         +      +I   Y   
Sbjct: 593 VGK---YDQAR-----------------SYYSKIASMKGYEVYGK-----FQIADSYYNE 627

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
             Y  A   ++ +  NY +  + E+A  + +     L   D      +     YP     
Sbjct: 628 KNYAKAGELYKAIYNNYGETFYGEQAYYKYITTLSLLGNTDAFEREKNNFLSVYPNSNLR 687

Query: 264 RYVETL 269
             +  L
Sbjct: 688 TTISNL 693


>gi|95929063|ref|ZP_01311808.1| Tetratricopeptide TPR_2 [Desulfuromonas acetoxidans DSM 684]
 gi|95134964|gb|EAT16618.1| Tetratricopeptide TPR_2 [Desulfuromonas acetoxidans DSM 684]
          Length = 225

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 52/135 (38%), Gaps = 8/135 (5%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
            T      E+Y +A     ++ ++ A   F++  R +P    A  +    A  Q + GK 
Sbjct: 97  TTAQPSATEIYRQAFADYTQERYADAEHGFSEFLRLYPENPFAATACFRLAQSQQAQGKT 156

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           QQA S   E ++ Y +        Y    S A +++     Q         ++R++E Y 
Sbjct: 157 QQALSHFAEVVSHYSDDHKASEALY----SMAVLLKKTNQPQH----AQAALNRLIENYP 208

Query: 171 NSPYVKGARFYVTVG 185
           +S   K A   +   
Sbjct: 209 DSAAAKKANAGLASL 223



 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 42/121 (34%), Gaps = 14/121 (11%)

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
             Y Q          S  +  Y  +P+   A F +   ++Q A             G+  
Sbjct: 112 ADYTQERYADAEHGFSEFLRLYPENPFAATACFRL--AQSQQAQ------------GKTQ 157

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
            A+  F  V+++YSD   A EA+  +            A+  ++ + E YP    A+   
Sbjct: 158 QALSHFAEVVSHYSDDHKASEALYSMAVLLKKTNQPQHAQAALNRLIENYPDSAAAKKAN 217

Query: 268 T 268
            
Sbjct: 218 A 218


>gi|152996218|ref|YP_001341053.1| Tol-Pal system YbgF [Marinomonas sp. MWYL1]
 gi|150837142|gb|ABR71118.1| Tol-Pal system YbgF [Marinomonas sp. MWYL1]
          Length = 262

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 50/135 (37%), Gaps = 8/135 (5%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
                 ++ Y  A   ++++NF +A   F++  +D+P   +          V+   GK +
Sbjct: 136 PPTAQAQQAYNDAYNLIRQRNFDEAETAFSKFVKDYPDNSLTGNGYYWLGEVKLVQGKSK 195

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           +A       I  +P         Y +G    Q+          T     Y+  ++ R+ N
Sbjct: 196 EAIEAFSTVIQNFPGHSKEQDSLYKLGTVSDQL--------GDTAKAKSYLQDVIRRFPN 247

Query: 172 SPYVKGARFYVTVGR 186
           S   K A  Y++  +
Sbjct: 248 SKAAKLAAGYLSKIK 262



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 44/123 (35%), Gaps = 19/123 (15%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
             +IR     QR         S+ V+ Y ++       +++   +              L
Sbjct: 149 YNLIR-----QRNFDEAETAFSKFVKDYPDNSLTGNGYYWLGEVK--------------L 189

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            +G+   AI  F  V+ N+      ++++ +L      L    +A+  +  +  R+P   
Sbjct: 190 VQGKSKEAIEAFSTVIQNFPGHSKEQDSLYKLGTVSDQLGDTAKAKSYLQDVIRRFPNSK 249

Query: 262 WAR 264
            A+
Sbjct: 250 AAK 252



 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/151 (14%), Positives = 56/151 (37%), Gaps = 23/151 (15%)

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
              P    A+++    A+       + +A +   +++  YP++        L G  Y  +
Sbjct: 133 SLQPPTAQAQQA-YNDAYNLIRQRNFDEAETAFSKFVKDYPDNS-------LTGNGYYWL 184

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
             +V   Q  +K  ++  S +++ +      + + + +    +QL            K  
Sbjct: 185 -GEVKLVQGKSKEAIEAFSTVIQNFPGHSKEQDSLYKLGTVSDQLGDT--------AKAK 235

Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
            Y+      Q V+  + +++ A+ A   L +
Sbjct: 236 SYL------QDVIRRFPNSKAAKLAAGYLSK 260



 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 31/87 (35%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
                D   +       Y    + L +    +A E F+   ++FP     + SL     V
Sbjct: 165 SKFVKDYPDNSLTGNGYYWLGEVKLVQGKSKEAIEAFSTVIQNFPGHSKEQDSLYKLGTV 224

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNV 130
               G   +A S  ++ I ++P SK  
Sbjct: 225 SDQLGDTAKAKSYLQDVIRRFPNSKAA 251


>gi|313205262|ref|YP_004043919.1| hypothetical protein [Paludibacter propionicigenes WB4]
 gi|312444578|gb|ADQ80934.1| Tetratricopeptide TPR_1 repeat-containing protein [Paludibacter
           propionicigenes WB4]
          Length = 1010

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 57/160 (35%), Gaps = 22/160 (13%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           ++  SA+V      Y    +  E  ITQYP+S+  D   Y +G +Y  M  +        
Sbjct: 582 AMFQSAYVAGLQKNYSSKITKLESLITQYPKSEYTDDAMYEMGRAYLMMDNN-------- 633

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           +  +    R++     S   + A               +EIG  Y    +   AIP ++ 
Sbjct: 634 EKAIATYQRLLAAQPTSEMARKAA--------------LEIGMVYYNEKQNDRAIPAYKN 679

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           V+A Y   + A  A+  L   Y+    +         +  
Sbjct: 680 VIAKYPGTDEANTALESLQTLYIEANDVSSYLNYTKSLGH 719



 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 12/126 (9%), Positives = 38/126 (30%), Gaps = 8/126 (6%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +++ A +   ++N+S            +P +     ++             ++A +  + 
Sbjct: 583 MFQSAYVAGLQKNYSSKITKLESLITQYPKSEYTDDAMYEMGRAYLMMDNNEKAIATYQR 642

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +   P S+        +GM Y          ++     +     ++ +Y  +     A 
Sbjct: 643 LLAAQPTSEMARKAALEIGMVYYN--------EKQNDRAIPAYKNVIAKYPGTDEANTAL 694

Query: 180 FYVTVG 185
             +   
Sbjct: 695 ESLQTL 700



 Score = 48.6 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 76/232 (32%), Gaps = 33/232 (14%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y+       + +  KA EYF+   R       + + L   A   Y   K   A    + 
Sbjct: 433 LYQLGTEAFTQNSLGKAIEYFSLSLRSSTTGKYSAECLYWRAESYYRTDKPDLAIRDLKA 492

Query: 120 YITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK- 176
           +        + + V   YL+  +Y          Q+     L +  +  E  TNS  V  
Sbjct: 493 FFNNSNSKSSANRVAANYLLAYAYFA--------QKNYPEALNWFLKYTEAETNSGAVTL 544

Query: 177 -GARFYVTVGR---NQLAAKEVE----------IGRYYLKRGEYVAA--------IPRFQ 214
             A   +         L+  ++              Y + +  YVA         I + +
Sbjct: 545 SDALNRIGDCYFYARNLSKAQLFYSKAVAASPNTADYAMFQSAYVAGLQKNYSSKITKLE 604

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
            ++  Y  +E+ ++AM  +  AY+ +   ++A      +    P    AR  
Sbjct: 605 SLITQYPKSEYTDDAMYEMGRAYLMMDNNEKAIATYQRLLAAQPTSEMARKA 656



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/152 (11%), Positives = 45/152 (29%), Gaps = 23/152 (15%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            ++Y   + + + ++++ A  Y ++ + D     +   + L           Y  A    
Sbjct: 283 NDMYLLGMSYFQTKDYTNAVRYLSKVTTDK--DEMTENAYLHLGNSYIKLKDYTNARLAY 340

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           E  +         +   +   ++  +          A    +    + +  + NS Y   
Sbjct: 341 EAALRTSFNKTVREEAMFNYALTSYEST-------SAFGESISAFEQFLTEFPNSKYTDE 393

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
           A  Y++                Y+    Y AA
Sbjct: 394 AYDYLSSV--------------YMTTKNYDAA 411



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 31/84 (36%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                    +YE    +L   N  KA   + +     P + +ARK+ L    V Y+  + 
Sbjct: 611 PKSEYTDDAMYEMGRAYLMMDNNEKAIATYQRLLAAQPTSEMARKAALEIGMVYYNEKQN 670

Query: 111 QQAASLGEEYITQYPESKNVDYVY 134
            +A    +  I +YP +   +   
Sbjct: 671 DRAIPAYKNVIAKYPGTDEANTAL 694



 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 60/171 (35%), Gaps = 18/171 (10%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ---------MIRDVPYD-QRA 154
           Y    Y +A    + Y   +P+    D   YL+GMSY Q          +  V  D    
Sbjct: 258 YRKRDYVKAIEHLKNYEKLFPQVLRND--MYLLGMSYFQTKDYTNAVRYLSKVTTDKDEM 315

Query: 155 TKLMLQYMSRI---VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY-YLKRGEYVAAI 210
           T+    ++      ++ YTN+     A    +  +              Y     +  +I
Sbjct: 316 TENAYLHLGNSYIKLKDYTNARLAYEAALRTSFNKTVREEAMFNYALTSYESTSAFGESI 375

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             F+  L  + ++++ +EA   L   Y+     D A    S+++ + P   
Sbjct: 376 SAFEQFLTEFPNSKYTDEAYDYLSSVYMTTKNYDAA--YQSILKIKTPNSK 424



 Score = 40.5 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 32/227 (14%), Positives = 71/227 (31%), Gaps = 25/227 (11%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPF----AGVARKSLLMSAFVQYSAGKYQQAASL 116
           Y  A       ++  A   F     +  +    +    +         Y+   Y Q    
Sbjct: 180 YYYAYTLYCLGSYKDALPDFLALEDNPAYRNIVSYYIVQI-------YYAQKDYDQLNDR 232

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER-------- 168
            E  +   P++KN   +Y + G    +  RD        K   +   +++          
Sbjct: 233 AERILRDNPDNKNNAEIYRIAGEIAYRK-RDYVKAIEHLKNYEKLFPQVLRNDMYLLGMS 291

Query: 169 YTNSPYVKGARFYVTVG---RNQLAAKE-VEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           Y  +     A  Y++     ++++     + +G  Y+K  +Y  A   ++  L    +  
Sbjct: 292 YFQTKDYTNAVRYLSKVTTDKDEMTENAYLHLGNSYIKLKDYTNARLAYEAALRTSFNKT 351

Query: 225 HAEEAMA-RLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
             EEAM    + +Y + +   E+          +P   +       +
Sbjct: 352 VREEAMFNYALTSYESTSAFGESISAFEQFLTEFPNSKYTDEAYDYL 398



 Score = 40.5 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 24/197 (12%), Positives = 55/197 (27%), Gaps = 25/197 (12%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A       ++ KA        +   P       +    A     A     A    + 
Sbjct: 734 YLAAEKQYMNGSYDKAIIGLQAYLTGFCPGGKYCTIAQYYLADSYDRADDKANALKAYQA 793

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +     ++ ++                + YDQ+     L Y  ++     ++     AR
Sbjct: 794 VLKIE-GNEFMEEAI--------IRCAGITYDQKDYSAALDYFKQLQTVAQSTEKKNVAR 844

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE-EAMARLVEAYV 238
             +      L               +Y   +     ++++   +   + EA+    +AY+
Sbjct: 845 LGILRCSYFL--------------NDYQTTVNIVNEIMSDSRSSAELKSEALYNRAKAYL 890

Query: 239 ALALMDEAREVVSLIQE 255
           AL    +A   +  +  
Sbjct: 891 ALKKDVDAAADLKSLAA 907



 Score = 39.7 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 65/203 (32%), Gaps = 26/203 (12%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVA-RKSLLMSAFVQYSAGKYQQAASLGE 118
           Y  A  +  ++N+ +A  +F +    +     V    +L       + A    +A     
Sbjct: 510 YLLAYAYFAQKNYPEALNWFLKYTEAETNSGAVTLSDALNRIGDCYFYARNLSKAQLFYS 569

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           + +   P +   DY  +            V   Q+     +  +  ++ +Y  S Y    
Sbjct: 570 KAVAASPNT--ADYAMF--------QSAYVAGLQKNYSSKITKLESLITQYPKSEYTDD- 618

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
                      A  E+  GR YL       AI  +Q +LA    +E A +A   +   Y 
Sbjct: 619 -----------AMYEM--GRAYLMMDNNEKAIATYQRLLAAQPTSEMARKAALEIGMVYY 665

Query: 239 ALALMDEAREVVSLIQERYPQGY 261
                D A      +  +YP   
Sbjct: 666 NEKQNDRAIPAYKNVIAKYPGTD 688


>gi|254441081|ref|ZP_05054574.1| tol-pal system protein YbgF, putative [Octadecabacter antarcticus
           307]
 gi|198251159|gb|EDY75474.1| tol-pal system protein YbgF, putative [Octadecabacter antarcticus
           307]
          Length = 261

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 44/129 (34%), Gaps = 8/129 (6%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           ++E + +A   +   +F  A +     +  +P + VA  + L+        G+   AA  
Sbjct: 138 EQEDFTRAQAAIASGDFRGAVDLLATFNETYPGSPVAADANLLRGQAYEQMGETTNAARA 197

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
                +  PE          +G S A + +         +     +  +  R+  +P V 
Sbjct: 198 YLAAFSGNPEGPVAPAALTKLGRSLAALGQQ--------RDACVTLGEVATRFPGAPEVG 249

Query: 177 GARFYVTVG 185
            A+  +   
Sbjct: 250 EAQDVMATL 258



 Score = 39.7 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 36/118 (30%), Gaps = 19/118 (16%)

Query: 147 DVPYDQRA-----TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
           D    Q A      +  +  ++   E Y  SP    A         Q+        R   
Sbjct: 141 DFTRAQAAIASGDFRGAVDLLATFNETYPGSPVAADANLLRGQAYEQMGET-TNAAR--- 196

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
               Y+AA        +   +   A  A+ +L  +  AL    +A   +  +  R+P 
Sbjct: 197 ---AYLAA-------FSGNPEGPVAPAALTKLGRSLAALGQQRDACVTLGEVATRFPG 244


>gi|332288803|ref|YP_004419655.1| tetratricopeptide repeat protein [Gallibacterium anatis UMN179]
 gi|330431699|gb|AEC16758.1| tetratricopeptide repeat protein [Gallibacterium anatis UMN179]
          Length = 390

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 74/196 (37%), Gaps = 34/196 (17%)

Query: 48  LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           +D+  +  Y++++  +   A  F+      +A + + + S +      A  +L   A + 
Sbjct: 103 IDNNPNYSYEQKLLTRQQLAKDFMFVGFLDRAEKLYQKLSEE---PDYAENALHELANIY 159

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
               ++ +A  +GE Y     +++N+        +S+      +  DQ+  + ++  +++
Sbjct: 160 QRTKEWDKAIEVGERYRKLTQQTENI-------ALSHYYCEFALESDQQ--QQIMASLTK 210

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
            +    N                      + +   Y K+  Y  AI   + ++    +  
Sbjct: 211 ALIVSPNCVRAT-----------------LILAEQYAKQNNYEQAIKTLEQIVE--QNLA 251

Query: 225 HAEEAMARLVEAYVAL 240
           +  EA+  L+E Y  L
Sbjct: 252 YISEALPPLIEYYHHL 267


>gi|154150715|ref|YP_001404333.1| TPR repeat-containing protein [Candidatus Methanoregula boonei 6A8]
 gi|153999267|gb|ABS55690.1| TPR repeat-containing protein [Methanoregula boonei 6A8]
          Length = 4079

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/119 (13%), Positives = 42/119 (35%), Gaps = 22/119 (18%)

Query: 61   YEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            Y+K        ++++A + ++   +    +P A   +          Y  G+Y++A    
Sbjct: 1370 YQKGRALFDSGSYTEAIDAYDRALEVESSYPEAHYHK------GLALYELGRYEEALLSY 1423

Query: 118  EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            ++ +   P   ++DY  +  G +  ++ R         +  +Q     +       Y  
Sbjct: 1424 DQALESNP---HLDYALFHRGAALMKLER--------YREAVQAFDAALLLLP--KYAP 1469



 Score = 45.1 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 55/174 (31%), Gaps = 26/174 (14%)

Query: 61   YEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            Y     +     + +A   F+            A  +        ++ GKY +A S  + 
Sbjct: 3410 YLVGRSYYALNTYDEAIAAFDRALDLQ---GEFAE-AWYYKGRTLFAMGKYGEAVSAYDS 3465

Query: 120  YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK--- 176
             +   P+    D  +Y  GM+  ++ R            +    + +    N  Y+    
Sbjct: 3466 TLVLRPKH---DEAFYHKGMALLKLQR--------AGDAVSAFDQALRLRPNFSYIWTGK 3514

Query: 177  -GARFYVTVGRNQLAAKEVEIG------RYYLKRGEYVAAIPRFQLVLANYSDA 223
              A   +   ++ ++     I       R Y + G    ++ R+Q  + N+   
Sbjct: 3515 GMALAALDRHKDAISCYTKAIALDRKDSRAYYQAGLSYLSLGRYQDAIRNFEAT 3568



 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 71/205 (34%), Gaps = 28/205 (13%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
            Y +  Y   +   +   + +A   F +     P            AF+     +Y QAA
Sbjct: 174 EYAKAYYNMGISLYEIGRYDEALGAFEKAHDLDPSDPW---VWYYRAFILAKQERYAQAA 230

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
                +++  PE  ++ +V  + G+S  ++        R          R +E+   +P 
Sbjct: 231 EAAGVFLSFEPEHADI-WV--IQGISLYRL--------RRLDEAADAFDRAIEQDPLAPD 279

Query: 175 VK----------GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
                             T   ++ A    +  + Y  RG+    + +++  +A++  A 
Sbjct: 280 AWLYKGFSLFDMERYEDATYALDKAAELSPQTTKIYYTRGKANQRLGKYREAVADFDRAL 339

Query: 225 HAE----EAMARLVEAYVALALMDE 245
            AE    +A+     + + L+  DE
Sbjct: 340 AAEPENADALYSRGVSCIHLSRYDE 364



 Score = 43.2 bits (101), Expect = 0.044,   Method: Composition-based stats.
 Identities = 10/76 (13%), Positives = 26/76 (34%), Gaps = 3/76 (3%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D      +Y+K +   + + +  A + F +     P      ++L           ++ +
Sbjct: 784 DPDNPVTLYQKGIALAQRERYDDAIKTFERLLTLEPENA---QALYYLGIAYAGRQRFDE 840

Query: 113 AASLGEEYITQYPESK 128
           A    E  +   P++ 
Sbjct: 841 AIVAFERSLEIDPKNP 856



 Score = 42.4 bits (99), Expect = 0.076,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 64/219 (29%), Gaps = 52/219 (23%)

Query: 61   YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLG 117
            Y K  + L    + +A   F     R+  +     +R   L         G++ +A    
Sbjct: 1200 YNKGKMLLDLGKYQEALAAFDQALEREPAYTEVFYSRGVALS------KLGRFPEAIEAF 1253

Query: 118  EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
            E       ++ N    YY  G++ +++ R         +  L    R +     +     
Sbjct: 1254 ER--NLEKDTSNAP-GYYFKGIALSKLGR--------YQEALDAFDRALVYDPEN----- 1297

Query: 178  ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA----EHAEEAMARL 233
                                  Y ++G  +  + RFQ  +A +           EA  R 
Sbjct: 1298 -------------------ALVYFQKGRALDGLNRFQEAVAAFEKTLALKPRYSEARMRK 1338

Query: 234  VEAYVALALMDEA-REVVSLIQERYPQG--YWARYVETL 269
              +   L    +A R+    I E  P     W +    L
Sbjct: 1339 GISLYNLGRYADAIRDFDRTIAEN-PHNFHAWYQKGRAL 1376



 Score = 38.9 bits (90), Expect = 0.77,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 70/230 (30%), Gaps = 52/230 (22%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +YEK V  ++   +  A E F Q     P       + L       + GK+  A +  + 
Sbjct: 621 LYEKGVALMQLSRWKDAAEAFGQAVEQDPG---LIDAWLAFGTCNANLGKFPDAIAAFDR 677

Query: 120 YITQYPESKNVDYVYYLVGM-------------SYAQMIRDVPYDQRATK------LMLQ 160
            I   P++      +   G+             +  + + D P D+RA          LQ
Sbjct: 678 VIALSPKNTQ---AFIHKGIALVTTGKFEEAIAALNRALEDAPRDERAWYYKGMSLAALQ 734

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGR----NQLA--AKEVEIGRYY-------------- 200
                V  +     V       +       N LA   K++E    Y              
Sbjct: 735 RFEEAVRSF---ERVLEINRRCSPAFFQKGNALAHLGKQLEAIISYDQALEIDPDNPVTL 791

Query: 201 LKRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEA 246
            ++G  +A   R+   +  +           +A+  L  AY      DEA
Sbjct: 792 YQKGIALAQRERYDDAIKTFERLLTLEPENAQALYYLGIAYAGRQRFDEA 841



 Score = 38.6 bits (89), Expect = 0.86,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 71/220 (32%), Gaps = 36/220 (16%)

Query: 31   AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
            A+C +  +    +      S      +  +Y + +     + F +A + +N         
Sbjct: 3585 ALCGVSMFHEAITSFDKALSEQSDYPEAWLY-RGIAEANLEEFEEALDCYNHALAQNE-- 3641

Query: 91   GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
              A  +LL          +  +A +  E+ +T  PES +    +Y  G ++    +D   
Sbjct: 3642 SYAT-ALLNKGRALIHLERTGEALAAIEKVLTIQPESAD---AFYYKGRAHLNRRQDDD- 3696

Query: 151  DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
                                       A         Q A      G    ++G+Y  A+
Sbjct: 3697 ------------------------AIDAFNRALAINRQFAEAHYYKGTALARKGQYEEAV 3732

Query: 211  PRFQLVLA---NYSDAEHAE-EAMARLVEAYVALALMDEA 246
              F   L    +Y +A + +  A+  L  +  ALA  D+A
Sbjct: 3733 AAFDAALRIKSDYPEAFYEKGRALFHLERSKEALAAYDQA 3772



 Score = 38.6 bits (89), Expect = 0.95,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 68/210 (32%), Gaps = 40/210 (19%)

Query: 53   DVRYQREVYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
            D +     YEK    L+     +A   F      D  F      +           GK+ 
Sbjct: 2824 DDKKPEAQYEKGRALLELGEDEQAVTSFTRALDLDTSFGD----AAYYLGLALERVGKFT 2879

Query: 112  QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
             A +  +  +   P+  +    +Y  G++  ++ RD           +Q   +  +   +
Sbjct: 2880 DAITAYDRMVAARPDHSD---AWYHRGIASERLGRDND--------AVQAYEKARQIEPH 2928

Query: 172  SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
            +         + +            GR + + G++  AI  F + L          E + 
Sbjct: 2929 N---------LPLL--------FADGRAWARLGQFEDAIHLFDIALGKEPG---NGEILF 2968

Query: 232  RLVEAYVALALMDEAREVVSL----IQERY 257
               +A  AL   DEA+E+  L    + + Y
Sbjct: 2969 EKAKALAALGRHDEAQEIFRLAFTQLTDNY 2998



 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 58/205 (28%), Gaps = 42/205 (20%)

Query: 51   VTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVAR-KSLLMSAFVQYS 106
            V D +     + K   F    N  +A   ++        +P     +  +LL        
Sbjct: 2346 VLDPKAADAAFFKGEAFSLLGNDEEAIHAYDLALSLESAYPEGSFKKGLALLRL------ 2399

Query: 107  AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
               Y  A    +  I   P        +Y  G++   + ++        +  ++  +  +
Sbjct: 2400 -KNYNGAIEAFDAAIQFVPGH---AQAHYHKGLALFALGKN--------EKAIRSFTHAL 2447

Query: 167  ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
            E   +               + L       G  Y     Y  A+  F  +L +       
Sbjct: 2448 EHDPS-------------LSDAL----FHTGLAYAALSRYSPALSAFDKLLES---GPQN 2487

Query: 227  EEAMARLVEAYVALALMDEAREVVS 251
             EA+ +       L   DEA  V+ 
Sbjct: 2488 AEALFQKGRMLAKLGRPDEALAVLE 2512



 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 58/162 (35%), Gaps = 14/162 (8%)

Query: 21   KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
            K A   FF      L+G + ++     L    +  Y    ++K +  L+ +N++ A E F
Sbjct: 2350 KAADAAFFKGEAFSLLGNDEEAIHAYDLALSLESAYPEGSFKKGLALLRLKNYNGAIEAF 2409

Query: 81   NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
            +   +  P      ++        ++ GK ++A      +        ++    +  G++
Sbjct: 2410 DAAIQFVPGHA---QAHYHKGLALFALGKNEKAIRS---FTHALEHDPSLSDALFHTGLA 2463

Query: 141  YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
            YA + R  P         L    +++E    +      +  +
Sbjct: 2464 YAALSRYSP--------ALSAFDKLLESGPQNAEALFQKGRM 2497



 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 71/216 (32%), Gaps = 34/216 (15%)

Query: 61   YEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            Y K     ++  + +A   F+       D+P      ++        +   + ++A +  
Sbjct: 3716 YYKGTALARKGQYEEAVAAFDAALRIKSDYP------EAFYEKGRALFHLERSKEALAAY 3769

Query: 118  EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT---NSPY 174
            ++ ++  P         +  G +Y  +        +     ++   R +E       + Y
Sbjct: 3770 DQALSANPG---YAEAIFQKGRTYITL--------QNPDGAIRSFDRALEVNPSCFQAHY 3818

Query: 175  VKGARFYVTVGRN-QLAAKEVEIG------RYYLKRGEYVAAIPRFQLVLANYSDA---- 223
             K    Y     +  +   +  I         Y  RG   AAI +++  + +Y  A    
Sbjct: 3819 WKARTLYDEGSYDAAITEYDRAIAIKPDRPELYRDRGLAYAAIDQYREAIKSYDKALELD 3878

Query: 224  EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
             H  +A +    +   L +  +A E      E+ P+
Sbjct: 3879 THGADAFSHKGSSLAELGMYRDALEAFEKAIEKDPE 3914



 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 17/144 (11%), Positives = 41/144 (28%), Gaps = 17/144 (11%)

Query: 53   DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
            D      +++  ++  + + + +A   F    R           L       ++  KY +
Sbjct: 1974 DPENPDALFQAGIVLARLEKYDEAIGLF---DRYLELGKENAGILYERGCAYFALQKYSE 2030

Query: 113  AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
            A +  +  +                G S A +           +  +    R++     +
Sbjct: 2031 AIASFDRALALDANHIG---ALVKKGQSRANL--------GQYEEAVTLFDRVITLDPEN 2079

Query: 173  PYVKGARFYVTVGRNQLAAKEVEI 196
                 A F +     +LA  E  +
Sbjct: 2080 ---VIAHFVMGTALARLARYEDAV 2100



 Score = 35.9 bits (82), Expect = 5.6,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 51/184 (27%), Gaps = 36/184 (19%)

Query: 63   KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
            +A+  L   +  +A   F+Q     P   VA           Y A KY+ A    +  ++
Sbjct: 3074 RALAALNRND--EAVASFDQVLALEPADPVAS---FERGRALYYAAKYEHAVEALDTTLS 3128

Query: 123  QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
              P         Y    S A + R             +   R++     +        Y 
Sbjct: 3129 SDPRHPG---ALYFRAASLAALERYA--------EAAESFERLLVYTPENADAW----YE 3173

Query: 183  TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
                  LA           +   Y  AI  F  VL          +A+ +   A   L  
Sbjct: 3174 QGCV--LA-----------RLRHYDEAIAAFDHVLNL---VPEHFDALFQKARALDDLGK 3217

Query: 243  MDEA 246
              EA
Sbjct: 3218 YSEA 3221


>gi|71281931|ref|YP_268471.1| TPR domain-containing protein [Colwellia psychrerythraea 34H]
 gi|71147671|gb|AAZ28144.1| TPR domain protein [Colwellia psychrerythraea 34H]
          Length = 263

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 69/196 (35%), Gaps = 31/196 (15%)

Query: 1   MSAVLGRAICIFEAWAYQL-------YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTD 53
           +S VL R   +++    ++        K A      +A     G     S ++       
Sbjct: 86  LSQVLERQRELYKEIDRRVNEVLKSTSKTASVTMSPVATISTAGNATSYSNNL------- 138

Query: 54  VRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
              + E Y+ A+   LK++ + +A   F   ++ FP +  A  +      + ++ G+  Q
Sbjct: 139 --TENETYDHALNLVLKDKRYQQAIVEFRAFNKSFPNSSYAPNAHYWLGQLLFNQGELAQ 196

Query: 113 AASLGEEYI---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           A    +E++    ++ +S         + M        V   Q   K  +    ++++ Y
Sbjct: 197 AE---QEFLIVVNKHKDSTKRPDALLKLAM--------VAQKQNNAKKAISTYQQLIKEY 245

Query: 170 TNSPYVKGARFYVTVG 185
             S   K  +  +   
Sbjct: 246 PESTAAKLGKPRLASL 261



 Score = 43.6 bits (102), Expect = 0.028,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 41/129 (31%), Gaps = 22/129 (17%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
              +YQQA      +   +P S      +Y +G             Q       Q    +
Sbjct: 153 KDKRYQQAIVEFRAFNKSFPNSSYAPNAHYWLGQLLFN--------QGELAQAEQEFLIV 204

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           V ++ +S     A   + +           + +   K+     AI  +Q ++  Y ++  
Sbjct: 205 VNKHKDSTKRPDALLKLAM-----------VAQ---KQNNAKKAISTYQQLIKEYPESTA 250

Query: 226 AEEAMARLV 234
           A+    RL 
Sbjct: 251 AKLGKPRLA 259



 Score = 41.3 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 17/117 (14%), Positives = 38/117 (32%), Gaps = 24/117 (20%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYV-TVGRNQ----LAAKEVEIGRYYLKRGEYV 207
           +  +  +       + + NS Y   A +++  +  NQ     A +E  I           
Sbjct: 155 KRYQQAIVEFRAFNKSFPNSSYAPNAHYWLGQLLFNQGELAQAEQEFLI----------- 203

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
                   V+  + D+    +A+ +L           +A      + + YP+   A+
Sbjct: 204 --------VVNKHKDSTKRPDALLKLAMVAQKQNNAKKAISTYQQLIKEYPESTAAK 252


>gi|86143443|ref|ZP_01061828.1| putative TPR-repeat protein [Leeuwenhoekiella blandensis MED217]
 gi|85829890|gb|EAQ48351.1| putative TPR-repeat protein [Leeuwenhoekiella blandensis MED217]
          Length = 1007

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 76/233 (32%), Gaps = 44/233 (18%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                    +YE    ++   +  +  + +++  R+ P +  A K+ L  A +  +  + 
Sbjct: 605 PQSSYRDDALYELGNTYVATGDNERGIQAYDRLVREIPKSKFAAKAQLKKALIYDNTSRS 664

Query: 111 QQAASLGEEYITQYPESKNVDYV------YYL-VGMS----------YAQMIRDVPYDQR 153
            QA +L +     YP +             Y+  G                + D   D  
Sbjct: 665 DQALNLFKRVAQDYPGTPEGVQAVASAKLIYIDKGQVDEYGRWANTLDYISVEDSELDDA 724

Query: 154 ATK------------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
           A                +Q   + +  Y N      A                 +G+ Y 
Sbjct: 725 AFSSAEQQLVGSNNAQAIQNFEKYLREYPNGQRAMEA--------------HFYLGQLYF 770

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
            + EY      ++ V+     +E  E+A+ARL + Y++ +   +A  V+  ++
Sbjct: 771 GQNEYAKTKSHYKYVIDK-ERSEFTEQALARLGQVYLSESNYADAVPVLKRLE 822



 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 67/228 (29%), Gaps = 52/228 (22%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR----------KSLLMSAFVQYSAGKY 110
           Y     + K++N+++A +YF         +   +           + +      +   +Y
Sbjct: 505 YNLGYAYFKKKNYNQATKYF---------SQFTQSGTDDNVRKMDAYMRLGDSHFIESEY 555

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A       I   P   N DY  +   +SY  + R+           ++ +S     + 
Sbjct: 556 WPAMEAYNAAIAM-PGG-NKDYATFQKSISYGFVDRNAQK--------IEGLSNFANVFP 605

Query: 171 NSPYVKGA-------------RFYVTVGRNQL----------AAKEVEIGRYYLKRGEYV 207
            S Y   A                     ++L          A  +++    Y       
Sbjct: 606 QSSYRDDALYELGNTYVATGDNERGIQAYDRLVREIPKSKFAAKAQLKKALIYDNTSRSD 665

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
            A+  F+ V  +Y       +A+A     Y+    +DE     + +  
Sbjct: 666 QALNLFKRVAQDYPGTPEGVQAVASAKLIYIDKGQVDEYGRWANTLDY 713



 Score = 40.1 bits (93), Expect = 0.33,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 81/234 (34%), Gaps = 34/234 (14%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
           ++S+        +   +   Y KA L  K+ NF +A +         P A    +S L  
Sbjct: 192 EASQLFEEIEAEEGTREDLSYFKADLNFKQGNFEEAIQL---AKEQLPTANRLEQSELNK 248

Query: 101 A--FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
                 ++ G++ +A    +EY  +     N DY  Y +G +Y +        Q      
Sbjct: 249 IIGESYFNLGQFDEALPYLKEYRGKRGRWSNTDY--YQLGYAYYK--------QGDYDSA 298

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE-VEIGRYYLKRGEYVAAIPRFQLVL 217
           +   +                  +  G+N +A      +   YLK G+   A+  F+   
Sbjct: 299 IGEFN-----------------KIIDGKNSVAQNAYYHLADAYLKTGKKQEALNAFRNAY 341

Query: 218 A-NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
             ++      +  +     +Y      + A + +    E+YP     + ++TL+
Sbjct: 342 QMDFEPKIKEDSGLNYTKLSYEIGNAYEPAPQAIGNYLEQYPDTPERQQLQTLL 395



 Score = 39.3 bits (91), Expect = 0.53,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 72/234 (30%), Gaps = 22/234 (9%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
            V YQ+  + + +    + ++ +A   F +   +        ++L   A  +Y+  +   
Sbjct: 421 KVAYQKVAFYRGIELYNDGDYQEAIINFEKSLSEPRTPEFTARALYWKAESEYTINRIDD 480

Query: 113 AASLGEEYITQY-----PESKNVDY----VY-----YLVGMSYAQMIRDVPYDQRATKLM 158
           A    +++         PE  N+ Y     Y     Y     Y         D    + M
Sbjct: 481 ALLTFKQFEQNSAARSLPEYDNLAYNLGYAYFKKKNYNQATKYFSQFTQSGTD-DNVRKM 539

Query: 159 LQYMSRIVERYTNSPY-----VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
             YM      +  S Y        A   +  G    A  +  I   ++ R      I   
Sbjct: 540 DAYMRLGDSHFIESEYWPAMEAYNAAIAMPGGNKDYATFQKSISYGFVDRNAQK--IEGL 597

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
                 +  + + ++A+  L   YVA    +   +    +    P+  +A   +
Sbjct: 598 SNFANVFPQSSYRDDALYELGNTYVATGDNERGIQAYDRLVREIPKSKFAAKAQ 651



 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 47/185 (25%), Gaps = 25/185 (13%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              +     F +A  Y             +        +  Y  G Y  A     + I  
Sbjct: 251 GESYFNLGQFDEALPYLK--EYRGKRGRWSNTDYYQLGYAYYKQGDYDSAIGEFNKIIDG 308

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
             ++      YY +  +Y +  +         +  L       +        + +    T
Sbjct: 309 --KNSVAQNAYYHLADAYLKTGKK--------QEALNAFRNAYQMDFEPKIKEDSGLNYT 358

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
                      EIG        Y  A       L  Y D    ++    L+++Y+     
Sbjct: 359 KL-------SYEIG------NAYEPAPQAIGNYLEQYPDTPERQQLQTLLIDSYITSKNY 405

Query: 244 DEARE 248
           + A E
Sbjct: 406 EGAME 410



 Score = 35.1 bits (80), Expect = 9.5,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 75/222 (33%), Gaps = 27/222 (12%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
               + Y+    + K+ ++  A   FN+         VA+ +    A      GK Q+A 
Sbjct: 277 WSNTDYYQLGYAYYKQGDYDSAIGEFNKIIDGK--NSVAQNAYYHLADAYLKTGKKQEAL 334

Query: 115 SLGEEYITQYPES------KNVDYVY----YLVGMSYAQMIRDV-----PYDQRATKLML 159
           +    +   Y         ++    Y    Y +G +Y    + +      Y     +  L
Sbjct: 335 NA---FRNAYQMDFEPKIKEDSGLNYTKLSYEIGNAYEPAPQAIGNYLEQYPDTPERQQL 391

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY-----LKRGEYVAAIPRFQ 214
           Q +  +++ Y  S   +GA   +   RN       +   +Y        G+Y  AI  F+
Sbjct: 392 QTL--LIDSYITSKNYEGAMELIENNRNFEDKVAYQKVAFYRGIELYNDGDYQEAIINFE 449

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
             L+     E    A+    E+   +  +D+A       ++ 
Sbjct: 450 KSLSEPRTPEFTARALYWKAESEYTINRIDDALLTFKQFEQN 491


>gi|71660285|ref|XP_821860.1| serine/threonine protein phosphatase type 5 [Trypanosoma cruzi
           strain CL Brener]
 gi|70887249|gb|EAO00009.1| serine/threonine protein phosphatase type 5, putative [Trypanosoma
           cruzi]
          Length = 472

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 41/151 (27%), Gaps = 27/151 (17%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
           +T       +  K     +E  +  A E + +              L   AF        
Sbjct: 1   MTSAEEADRLKNKGNEAFQEGKWHHAIELYTEALALH----KTPVILCNRAFAYLKTELA 56

Query: 111 QQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
             A +  +E +   P      Y   YY    ++  + +         K  L+    +V+ 
Sbjct: 57  GAALTDADEALRLDPG-----YVKAYYRKASAHLYLGKH--------KEALKDFKTVVQL 103

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
                    AR  +         KEV   R+
Sbjct: 104 IPGDK---DARNKLDFC-----EKEVRRIRF 126


>gi|40062541|gb|AAR37486.1| hypothetical protein MBMO_EBAC750-01B07.28 [uncultured marine
           bacterium 106]
          Length = 235

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 35/78 (44%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           + IG  +L +G    A   + L L  Y  + H  +A+  L +A   L  +++ + +   +
Sbjct: 158 MAIGNGFLAQGHSKQAASHYGLFLREYPKSRHTPQALYYLGQAMKDLGEIEKQKILWKEL 217

Query: 254 QERYPQGYWARYVETLVK 271
              YPQ   A+  +  ++
Sbjct: 218 IINYPQSSLAKRAKKRLR 235



 Score = 47.0 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 42/120 (35%), Gaps = 8/120 (6%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
            ++ L+  N  +A E+     +      +    L+       + G  +QAAS    ++ +
Sbjct: 124 GLVSLQSGNPDQAVEHLQDILKAKKATKLKGDILMAIGNGFLAQGHSKQAASHYGLFLRE 183

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
           YP+S++     Y +G            D    +        ++  Y  S   K A+  + 
Sbjct: 184 YPKSRHTPQALYYLG--------QAMKDLGEIEKQKILWKELIINYPQSSLAKRAKKRLR 235


>gi|27382259|ref|NP_773788.1| hypothetical protein bll7148 [Bradyrhizobium japonicum USDA 110]
 gi|27355430|dbj|BAC52413.1| bll7148 [Bradyrhizobium japonicum USDA 110]
          Length = 398

 Score = 52.8 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 34/133 (25%), Gaps = 22/133 (16%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
                        Y  A    + +  +YP    +    Y +G SY Q         +  +
Sbjct: 277 EFDLGIGYMQRKDYALAEQTMKNFAQKYPSDPLLGDAQYWLGESYFQR--------QQYR 328

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              +    +  +Y  S     A   +      L  KE              AA   F  V
Sbjct: 329 DSAEAFLAVTTKYEKSAKAPDALLRLGQSLAALKEKE--------------AACAAFGEV 374

Query: 217 LANYSDAEHAEEA 229
              Y  A    +A
Sbjct: 375 GRKYPRASAGVKA 387



 Score = 44.0 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 44/110 (40%), Gaps = 14/110 (12%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           ++   L  Q M    ++Y + P +  A++++              G  Y +R +Y  +  
Sbjct: 287 RKDYALAEQTMKNFAQKYPSDPLLGDAQYWL--------------GESYFQRQQYRDSAE 332

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            F  V   Y  +  A +A+ RL ++  AL   + A      +  +YP+  
Sbjct: 333 AFLAVTTKYEKSAKAPDALLRLGQSLAALKEKEAACAAFGEVGRKYPRAS 382



 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 12/126 (9%), Positives = 42/126 (33%), Gaps = 14/126 (11%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           L ++      R+ ++  + +++ ++++ A +     ++ +P   +   +        +  
Sbjct: 265 LTTLPPSATPRDEFDLGIGYMQRKDYALAEQTMKNFAQKYPSDPLLGDAQYWLGESYFQR 324

Query: 108 GKYQQAASLGEEYITQ---YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
            +Y       E ++     Y +S         +G S A +        +  +        
Sbjct: 325 QQY---RDSAEAFLAVTTKYEKSAKAPDALLRLGQSLAAL--------KEKEAACAAFGE 373

Query: 165 IVERYT 170
           +  +Y 
Sbjct: 374 VGRKYP 379


>gi|332521272|ref|ZP_08397728.1| Tetratricopeptide TPR_1 repeat-containing protein [Lacinutrix
           algicola 5H-3-7-4]
 gi|332043000|gb|EGI79198.1| Tetratricopeptide TPR_1 repeat-containing protein [Lacinutrix
           algicola 5H-3-7-4]
          Length = 1005

 Score = 52.8 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/219 (15%), Positives = 72/219 (32%), Gaps = 34/219 (15%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA-RKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A  + K ++++ A +YFN+     P   +    + L  A   + + +Y  A     +
Sbjct: 504 YNLAYTYFKLKDYANATQYFNKFISKKPQDQIRLNDAYLRLADAHFVSSRYNDAIIAYNQ 563

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            I         DY Y+   +SY  +              +  +   ++ Y  S     A 
Sbjct: 564 AIEI--GKIEADYAYFQKAISYGYL--------GQANKKITELETFIDTYKASKLRDDAM 613

Query: 180 FYVTVGRNQLAAKEVEIGRY-----------------------YLKRGEYVAAIPRFQLV 216
           + +     +  +KE  +  Y                       Y    +   A+ +F+ V
Sbjct: 614 YALGNAYVKAGSKEKAMATYNNLTATYSTSPFVSNTLLRQGLVYYNNNQNQEALTKFKTV 673

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
             ++  +  A +A+A     Y+ L  ++     V  +  
Sbjct: 674 AKDFPASAEANQAVATARLIYIDLGEVENYAAWVQTLDY 712



 Score = 45.9 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 68/254 (26%), Gaps = 60/254 (23%)

Query: 45  DVYLDSVTDVRY-QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA-GVARKSLLMSAF 102
           D  L    D  Y  +  + KA       N++ A   FN   +    +    +      A+
Sbjct: 449 DNSLKEPQDPNYVAKAAFWKAETDYNLTNYNDALNGFNTYKQTATSSLKETQNLDYNLAY 508

Query: 103 VQYSAGKYQQAASLGEEYITQYPESK---------------------------------- 128
             +    Y  A     ++I++ P+ +                                  
Sbjct: 509 TYFKLKDYANATQYFNKFISKKPQDQIRLNDAYLRLADAHFVSSRYNDAIIAYNQAIEIG 568

Query: 129 --NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
               DY Y+   +SY  +              +  +   ++ Y  S     A        
Sbjct: 569 KIEADYAYFQKAISYGYL--------GQANKKITELETFIDTYKASKLRDDAM------- 613

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
                    +G  Y+K G    A+  +  + A YS +      + R    Y       EA
Sbjct: 614 -------YALGNAYVKAGSKEKAMATYNNLTATYSTSPFVSNTLLRQGLVYYNNNQNQEA 666

Query: 247 REVVSLIQERYPQG 260
                 + + +P  
Sbjct: 667 LTKFKTVAKDFPAS 680



 Score = 41.3 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 70/230 (30%), Gaps = 40/230 (17%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
             V   ++     ++  +         +N+  A  Y N+      +     ++     F+
Sbjct: 127 DKVDESALARKEREKFYFNNGYTAFTTKNYDDAKTYLNKVESSQEYGS---QAKYYIGFM 183

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ-YM 162
            Y    Y +A +  ++           D   Y   +SY Q   D+ +     K  +    
Sbjct: 184 AYQGDDYDKANTYFDQ---------VKDQEKYQEKLSYYQA--DLNFKLGKFKEAIALAS 232

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI----------GRY-----------YL 201
           +R+ +       V      +      L   E  I          G++           Y 
Sbjct: 233 ARLDDSSP--EEVSELSKIIGESYFNLEQYEEAIPFLQAYKGKRGKWNNTDYYQLGYAYY 290

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
           K+ +Y  AI  F  ++    D   A+ A   L E+Y+ L    EA     
Sbjct: 291 KQKDYKKAISEFNKIIGG--DNSVAQNAYYHLGESYINLNKKQEALNAFR 338



 Score = 40.5 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 24/221 (10%), Positives = 69/221 (31%), Gaps = 41/221 (18%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
            +D+      +  +   + + L+++++  A     +   +  F   +  +        Y 
Sbjct: 784 VVDASQSEFTEEALLRLSQITLEKKDWENALPILKRLETEANFPQNSLFAQSNLMQANYQ 843

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA--TKLMLQYMSR 164
             KY  A +  E                    +S++ +   V  D +    +  ++    
Sbjct: 844 LKKYNDAVAYAE------------------KVLSHSTLDNKVKSDAQVIIARSAIKT--- 882

Query: 165 IVERYTNSPYVKGARFYVTVGRNQL-------AAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
                        A+  +   + +L       A        +  K G Y  ++   Q ++
Sbjct: 883 ----------GNEAKAKLAYEQVELTATGVTAAEALYYNAYFKNKAGAYQNSLKATQRLV 932

Query: 218 ANYSDAEHA-EEAMARLVEAYVALALMDEAREVVSLIQERY 257
            ++S   +   + +  + +   AL    +A  ++  I + +
Sbjct: 933 KDFSSYRYYGAKGLIVMAKNQYALNDAFQATYILESIPKNF 973



 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 28/210 (13%), Positives = 56/210 (26%), Gaps = 31/210 (14%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            ++KA+ +      +K           +  + +   ++         AG  ++A +    
Sbjct: 576 YFQKAISYGYLGQANKKITELETFIDTYKASKLRDDAMYALGNAYVKAGSKEKAMATYNN 635

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
               Y  S  V       G+ Y    ++        +  L     + + +  S     A 
Sbjct: 636 LTATYSTSPFVSNTLLRQGLVYYNNNQN--------QEALTKFKTVAKDFPASAEANQAV 687

Query: 180 FYVTVGRNQLAAKEVEIG-----RYYLKRGE------YVAA------------IPRFQLV 216
               +    L   E          Y            Y AA            I +F+  
Sbjct: 688 ATARLIYIDLGEVENYAAWVQTLDYVEVTNADLDHASYQAAEKQYLDDNTNNAIKQFEKY 747

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEA 246
              + +  HA +A   L + Y       +A
Sbjct: 748 NREFKNGLHATQAHFYLAQLYFKENENQKA 777



 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 24/184 (13%), Positives = 51/184 (27%), Gaps = 27/184 (14%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              +   + + +A  +                      +  Y    Y++A S   + I  
Sbjct: 251 GESYFNLEQYEEAIPFLQAYKGKR--GKWNNTDYYQLGYAYYKQKDYKKAISEFNKIIG- 307

Query: 124 YPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
                +V    YY +G SY  + +         +  L       +   +    + A  ++
Sbjct: 308 --GDNSVAQNAYYHLGESYINLNKK--------QEALNAFRNASQMDYDLKIQEDA--WL 355

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
              +             Y     Y +        L  Y +  + EE    L+++Y+    
Sbjct: 356 NYAKIS-----------YDIGNPYQSVPQVLSGYLEQYPETTYKEEVENLLIDSYITSKN 404

Query: 243 MDEA 246
             EA
Sbjct: 405 YKEA 408


>gi|307747976|gb|ADN91246.1| Putative lipoprotein [Campylobacter jejuni subsp. jejuni M1]
          Length = 215

 Score = 52.8 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 59/157 (37%), Gaps = 9/157 (5%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
              D         E Y++ +  L++++  KA +++N  + +     +   +L++ A    
Sbjct: 20  TKNDEGLYNLSASEWYKQIIKDLQDKDLEKADDHYNGMASEHVADPLLETTLIILAQAHM 79

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
              +Y+ A    +EY  ++  S+N DY+ YL   +          +Q       + +   
Sbjct: 80  DEEEYKLAEFYLDEYNKKFGNSRNADYIRYLKIKAKFDAFAVPNRNQALMLESQKEIDTF 139

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
           ++ Y  + Y    +  +T            +  +YL 
Sbjct: 140 LKDYPYTEYEPLVQTMLTK---------FNLAVFYLN 167


>gi|300822969|ref|ZP_07103104.1| tol-pal system protein YbgF [Escherichia coli MS 119-7]
 gi|300524510|gb|EFK45579.1| tol-pal system protein YbgF [Escherichia coli MS 119-7]
          Length = 190

 Score = 52.8 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 49/156 (31%), Gaps = 9/156 (5%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89
           +           +      +          Y  A+  +++++    A   F    +++P 
Sbjct: 43  SGAAASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPD 102

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +     +      + Y+ GK   AA      +  YP+S       + VG+        + 
Sbjct: 103 STYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGV--------IM 154

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            D+  T        +++ +Y  +   K A+  +   
Sbjct: 155 QDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM 190



 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      ++ Y +S Y+  A +++               
Sbjct: 69  ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLN----------- 117

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
                +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 118 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 174

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 175 PGTDGAKQAQK 185



 Score = 45.9 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I  YP+S  +    Y +G       +              Y + +V+ Y 
Sbjct: 87  DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 138

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A F V V                  +G+   A   +Q V++ Y   + A++A 
Sbjct: 139 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 184

Query: 231 ARL 233
            RL
Sbjct: 185 KRL 187


>gi|188997334|ref|YP_001931585.1| PDZ/DHR/GLGF domain protein [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932401|gb|ACD67031.1| PDZ/DHR/GLGF domain protein [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 668

 Score = 52.8 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 71/225 (31%), Gaps = 46/225 (20%)

Query: 64  AVLFLKEQNFSKAYEYFN---QCSRDFP--------FAGVARK---SLLMSAFVQYSAGK 109
               L  +++ KA        + S++ P        ++    K   +L +     Y  G+
Sbjct: 100 GKAHLAIKDYDKAIHLLEIAAKESKENPSEPLWQGFYSRFVPKKSEALSLLGSAYYLKGE 159

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           YQ+A     E I       N+   ++ + MSY ++        +     ++   R +E  
Sbjct: 160 YQKAVEALNESIKL---DPNLSDPFFFLAMSYGKL--------KEYGKAVEAAKRAIELD 208

Query: 170 TNSP--YVK-----GARFYVTVGRNQLAA----------KEVEIGRYYLKRGEYVAAIPR 212
             +P  Y         +         L              +++   Y ++  Y  A+  
Sbjct: 209 PKAPTYYAVLGLIYKDQKKYKEAEENLKKSIELDPKSIVSYLKLADLYYEKESYKEAVNT 268

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQER 256
              VL          EA   L+  Y+A+   D+A       I+  
Sbjct: 269 LTKVLEINP---SNMEANYSLIYTYMAMGQFDKAIESANKAIKHN 310



 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 3/68 (4%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           KA  F +E  F KA E + +     PF     K+    A        Y++A      Y+ 
Sbjct: 586 KAEAFTEEGKFEKAIEEYQKALELSPFYPNLYKA---LALSYGQIKDYKKAIKNMNIYLE 642

Query: 123 QYPESKNV 130
            YP++ ++
Sbjct: 643 LYPDAPDI 650


>gi|323967345|gb|EGB62766.1| tol-pal system protein YbgF [Escherichia coli M863]
 gi|327254431|gb|EGE66053.1| tol-pal system protein YbgF [Escherichia coli STEC_7v]
          Length = 263

 Score = 52.8 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/156 (12%), Positives = 49/156 (31%), Gaps = 9/156 (5%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89
           +           +      +          Y  A+  +++++    A   F    +++P 
Sbjct: 116 SGAAASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPD 175

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +     +      + Y+ GK   AA      +  YP+S       + VG+        + 
Sbjct: 176 STYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGV--------IM 227

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            ++  T        +++ +Y  +   K A+  +   
Sbjct: 228 QEKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM 263



 Score = 51.7 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      ++ Y +S Y+  A +++               
Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLN----------- 190

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
                +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 191 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQEKGDTAKAKAVYQQVISKY 247

Query: 258 PQGYWARYVET 268
           P    A+  + 
Sbjct: 248 PGTDGAKQAQK 258



 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 43/123 (34%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I  YP+S  +    Y +G       +              Y + +V+ Y 
Sbjct: 160 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A F V V                 ++G+   A   +Q V++ Y   + A++A 
Sbjct: 212 KSPKAADAMFKVGVIMQ--------------EKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257

Query: 231 ARL 233
            RL
Sbjct: 258 KRL 260


>gi|317052770|ref|YP_004113886.1| tetratricopeptide repeat-containing protein [Desulfurispirillum
           indicum S5]
 gi|316947854|gb|ADU67330.1| Tetratricopeptide TPR_1 repeat-containing protein
           [Desulfurispirillum indicum S5]
          Length = 1018

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 84/258 (32%), Gaps = 63/258 (24%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS------AGKYQQAASL 116
           +A  +  E N  +A +      R+ P + +  ++  +     ++        +++ A ++
Sbjct: 212 QAYSYFGEGNDLQALDELLYIIREHPESPLVEEATFLLGDAYHNIPQEPPGVQFRDAITV 271

Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDV---------------- 148
            E+ I  YP S+ V    Y +G SY             +MI                   
Sbjct: 272 YEKAIDLYPGSRFVPRAIYGIGQSYEALGNPAAAKFHYEMIPSPIVNEYIGPALLAVARL 331

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK-RGEY- 206
             +Q + +  ++ M  +++ Y    +   A   +T      A        Y+ + + EY 
Sbjct: 332 ELEQDSVRGAIEAMETLLQ-YDEDHWRMEALRQLTRL-EFKADHYQRSADYFTRLQNEYS 389

Query: 207 ------------------------VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
                                    AA    Q V+  Y   + A +A   L   +  +  
Sbjct: 390 ELFTFDPQLLLEAAQSYHQVGELRKAAWN-LQRVINVYPHFDGAAKAFLELATIHHTVGN 448

Query: 243 MDEAREVVSLIQERYPQG 260
            D A+  +S +  +YP  
Sbjct: 449 TDLAQMFISELTGKYPDT 466



 Score = 44.0 bits (103), Expect = 0.025,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 64/182 (35%), Gaps = 25/182 (13%)

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
           L  A+  +  G   QA       I ++PES  V+   +L+G +Y  + ++ P  Q   + 
Sbjct: 210 LRQAYSYFGEGNDLQALDELLYIIREHPESPLVEEATFLLGDAYHNIPQEPPGVQ--FRD 267

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA-------AKEV---------------E 195
            +    + ++ Y  S +V  A + +      L          E+                
Sbjct: 268 AITVYEKAIDLYPGSRFVPRAIYGIGQSYEALGNPAAAKFHYEMIPSPIVNEYIGPALLA 327

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           + R  L++     AI   + +L  Y +     EA+ +L            + +  + +Q 
Sbjct: 328 VARLELEQDSVRGAIEAMETLLQ-YDEDHWRMEALRQLTRLEFKADHYQRSADYFTRLQN 386

Query: 256 RY 257
            Y
Sbjct: 387 EY 388


>gi|283850790|ref|ZP_06368076.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio sp. FW1012B]
 gi|283573713|gb|EFC21687.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio sp. FW1012B]
          Length = 999

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 39/102 (38%), Gaps = 14/102 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
               Y + + ++Y        A   +              G YY  RG+Y  A   +Q +
Sbjct: 450 EAKGYFNVLTKKYP-----ADANVPLIN---------FYWGEYYFDRGDYKKAAEEYQGL 495

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           +  + ++++  E    L +  V L    EA ++   I +R+P
Sbjct: 496 IEKFPESKYVREGAMGLAKTLVKLGRYKEAAQIADYIGKRWP 537



 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 51/160 (31%), Gaps = 23/160 (14%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI-T 122
              +    ++ KA E +      FP +   R+  +  A      G+Y++AA + + YI  
Sbjct: 476 GEYYFDRGDYKKAAEEYQGLIEKFPESKYVREGAMGLAKTLVKLGRYKEAAQIAD-YIGK 534

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
           ++P        YY+      ++  D+ Y     K                         +
Sbjct: 535 RWPR-------YYVEFPGILRIDGDIAYRNGDVKKARDDYLTFYNMTPKVKDADLVLARL 587

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
                         G  Y K G   AA+  + + + +Y +
Sbjct: 588 --------------GDIYAKLGNRPAAVDFYNMAVKDYPN 613



 Score = 42.8 bits (100), Expect = 0.048,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 30/81 (37%), Gaps = 4/81 (4%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
           V D     E++        +  +    + +    RD P + +A  + +  A  Q     Y
Sbjct: 629 VHDQPTISEMFS----LFDKPQYGSPDDIYEGIIRDHPNSPLAPLAQIKLAMWQLYRQNY 684

Query: 111 QQAASLGEEYITQYPESKNVD 131
            ++      ++ +YP+++   
Sbjct: 685 PESLKSAARFLERYPKNELAP 705


>gi|78186500|ref|YP_374543.1| hypothetical protein Plut_0617 [Chlorobium luteolum DSM 273]
 gi|78166402|gb|ABB23500.1| conserved hypothetical protein [Chlorobium luteolum DSM 273]
          Length = 267

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 53/162 (32%), Gaps = 8/162 (4%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           K A  I  ++           ++           +   +++ +      +  F+ A E F
Sbjct: 113 KAAAVIPPAVPGSAGATSPDSAAATAAAPPSPSPKSDSDLFNEGAAMFGKDRFNDARESF 172

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
           +   +D+P +     +    A   ++   Y +A    +  I +Y +S       +    S
Sbjct: 173 SALIKDYPKSPRVGDAQFFIAESWFAEKAYDKAILDYQTVIAKYTKSPKRPMAIFKQARS 232

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
             ++I D                 +V  Y ++P  K AR  +
Sbjct: 233 -FELIGD-------AANAKTRYRDLVNVYPSAPEAKLARQKL 266



 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 37/108 (34%), Gaps = 14/108 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              +  S +++ Y  SP V  A+                I   +     Y  AI  +Q V
Sbjct: 167 DARESFSALIKDYPKSPRVGDAQ--------------FFIAESWFAEKAYDKAILDYQTV 212

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
           +A Y+ +     A+ +   ++  +     A+     +   YP    A+
Sbjct: 213 IAKYTKSPKRPMAIFKQARSFELIGDAANAKTRYRDLVNVYPSAPEAK 260


>gi|114319402|ref|YP_741085.1| hypothetical protein Mlg_0240 [Alkalilimnicola ehrlichii MLHE-1]
 gi|114225796|gb|ABI55595.1| conserved hypothetical protein [Alkalilimnicola ehrlichii MLHE-1]
          Length = 278

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 46/146 (31%), Gaps = 8/146 (5%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
                  + TD R + + Y+ A   + E  F +A + F     D P    +  +    A 
Sbjct: 139 DETPTTPADTDARSEADRYQAAFQLITEGRFRRAGQAFEALLDDHPDGEFSANARYWLAE 198

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y+  ++ +A    E  +  +P+S         +G    +  R             + +
Sbjct: 199 TWYAEREFDRAGEEFERLLADHPDSNKAADAKLKLGFVRFEQER--------YDEARELL 250

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQ 188
                 +  +     A   + + R +
Sbjct: 251 QATRNEHRGTTAASLAEQRLELMRER 276


>gi|284040356|ref|YP_003390286.1| hypothetical protein Slin_5521 [Spirosoma linguale DSM 74]
 gi|283819649|gb|ADB41487.1| Tetratricopeptide repeat protein [Spirosoma linguale DSM 74]
          Length = 607

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 46/126 (36%), Gaps = 7/126 (5%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y    L L +    +A    N+  + +P   +  + L + A      GK  +A    ++ 
Sbjct: 484 YADIDLMLFQNKTEEAVLELNKMLKTYPEHSLVDEILWLRANTFLKQGKNAEALEDLKKI 543

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +  YP     D   ++ G  Y   ++D        +  ++   +++ +Y  S Y   AR 
Sbjct: 544 VASYPNDILGDDAQFMQGKIYEDRLKD-------KQAAMEAYQKVLTQYPGSIYGAEARK 596

Query: 181 YVTVGR 186
                R
Sbjct: 597 RFRALR 602



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 47/127 (37%), Gaps = 23/127 (18%)

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
             K ++A     + +  YPE   VD + +L   ++ +  ++           L+ + +IV
Sbjct: 493 QNKTEEAVLELNKMLKTYPEHSLVDEILWLRANTFLKQGKNA--------EALEDLKKIV 544

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR-GEYVAAIPRFQLVLANYSDAEH 225
             Y N      A+                 G+ Y  R  +  AA+  +Q VL  Y  + +
Sbjct: 545 ASYPNDILGDDAQ--------------FMQGKIYEDRLKDKQAAMEAYQKVLTQYPGSIY 590

Query: 226 AEEAMAR 232
             EA  R
Sbjct: 591 GAEARKR 597


>gi|307128659|ref|YP_003880689.1| hypothetical protein SMCARI_189 [Candidatus Sulcia muelleri CARI]
 gi|306483121|gb|ADM89991.1| conserved hypothetical protein [Candidatus Sulcia muelleri CARI]
          Length = 320

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 40/87 (45%)

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
            + +GM Y+    D  +DQ  T  ++ ++    E Y NS  +K   + +     ++  K+
Sbjct: 150 LFYIGMCYSFKYNDFNFDQEDTYKLIYFLLTFKELYPNSRRIKKVDYNLYKALFKIKQKK 209

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANY 220
           + I  YY     Y +++  F+ ++  +
Sbjct: 210 LTIAYYYFNNKNYKSSLIIFKYLIKYF 236


>gi|294507043|ref|YP_003571101.1| Conserved hypothetical protein, containing tetratricopeptide repeat
           [Salinibacter ruber M8]
 gi|294343371|emb|CBH24149.1| Conserved hypothetical protein, containing tetratricopeptide repeat
           [Salinibacter ruber M8]
          Length = 1003

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 49/144 (34%), Gaps = 17/144 (11%)

Query: 96  SLLMSAFVQYSA-GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           +    A   + A G+   A +     + + P+        Y +  ++          Q  
Sbjct: 586 AQYELANALFRAAGRPDSAQTWFRRVLDETPDHPVAPQALYGLAQAH--------RAQGD 637

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGR------NQLAAKEVEIGRYY--LKRGEY 206
           T        R+++ + ++P  K AR  + +          ++  +    R Y   + G +
Sbjct: 638 TAAGDDAYRRLIDEHPDTPIAKRAREQLGLATTDEDPERTVSRADSAYARAYEAWRSGRH 697

Query: 207 VAAIPRFQLVLANYSDAEHAEEAM 230
            AA+  F  V   Y +   A  A+
Sbjct: 698 DAALRAFLKVADAYRETSVAPRAL 721



 Score = 40.5 bits (94), Expect = 0.24,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 1/77 (1%)

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           A  E+    +    G   +A   F+ VL    D   A +A+  L +A+ A        + 
Sbjct: 586 AQYELANALF-RAAGRPDSAQTWFRRVLDETPDHPVAPQALYGLAQAHRAQGDTAAGDDA 644

Query: 250 VSLIQERYPQGYWARYV 266
              + + +P    A+  
Sbjct: 645 YRRLIDEHPDTPIAKRA 661



 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 42/102 (41%), Gaps = 20/102 (19%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG--RYYLKRGEYVAA 209
           Q +    +Q  + ++  + NS +V  A               + IG  RYY +   YV A
Sbjct: 103 QSSFGEAIQKSAAVLREHPNSEWVDDAL--------------LLIGRSRYYQQ--NYVGA 146

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
           + +F+  +A   DAE   EA  RL +  V      EA + + 
Sbjct: 147 VQKFREAIAL--DAEREGEARFRLAQTLVVAGRYREAADALR 186


>gi|258405238|ref|YP_003197980.1| tol-pal system protein YbgF [Desulfohalobium retbaense DSM 5692]
 gi|257797465|gb|ACV68402.1| tol-pal system protein YbgF [Desulfohalobium retbaense DSM 5692]
          Length = 292

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 59/152 (38%), Gaps = 22/152 (14%)

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
             + P    + +++   A  Q+    YQ A +L   +I + P+S  V   Y+  G SY Q
Sbjct: 160 EAEAPQTFDSPQAMYDEALAQFRKRNYQNAQALWARFIDENPKSDLVPNAYFWQGESYYQ 219

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
                   Q   +  +     ++ER+  S     +++   + +  L+        +Y K 
Sbjct: 220 S-------QNYAR-AVLAYQEVIERFQES-----SKYRPALLKQGLS--------FY-KL 257

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
           G+        Q V+ +  D+  A  A A L +
Sbjct: 258 GKTKPGRLLLQRVIDSAPDSPEAGRAEAFLEQ 289



 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 51/135 (37%), Gaps = 8/135 (5%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
              ++       + +Y++A+   +++N+  A   + +   + P + +   +        Y
Sbjct: 159 AEAEAPQTFDSPQAMYDEALAQFRKRNYQNAQALWARFIDENPKSDLVPNAYFWQGESYY 218

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
            +  Y +A    +E I ++ ES          G+S+ ++          TK     + R+
Sbjct: 219 QSQNYARAVLAYQEVIERFQESSKYRPALLKQGLSFYKL--------GKTKPGRLLLQRV 270

Query: 166 VERYTNSPYVKGARF 180
           ++   +SP    A  
Sbjct: 271 IDSAPDSPEAGRAEA 285



 Score = 42.0 bits (98), Expect = 0.099,   Method: Composition-based stats.
 Identities = 20/147 (13%), Positives = 48/147 (32%), Gaps = 22/147 (14%)

Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
           P++ +     Y   ++  +         R  +      +R ++    S  V  A F+   
Sbjct: 164 PQTFDSPQAMYDEALAQFRK--------RNYQNAQALWARFIDENPKSDLVPNAYFWQ-- 213

Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
                       G  Y +   Y  A+  +Q V+  + ++     A+ +   ++  L    
Sbjct: 214 ------------GESYYQSQNYARAVLAYQEVIERFQESSKYRPALLKQGLSFYKLGKTK 261

Query: 245 EAREVVSLIQERYPQGYWARYVETLVK 271
             R ++  + +  P    A   E  ++
Sbjct: 262 PGRLLLQRVIDSAPDSPEAGRAEAFLE 288


>gi|308273438|emb|CBX30040.1| hypothetical protein N47_D28490 [uncultured Desulfobacterium sp.]
          Length = 655

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 44/271 (16%), Positives = 84/271 (30%), Gaps = 50/271 (18%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKAY 77
           + K    +   +    L    +    D  +  V  D    + ++ KA      Q +++A 
Sbjct: 1   MKKCIKLLIIPVLFALLACIPKAPVADFKVPDVKVDDTRGKALFSKAENLFSTQKYNRAL 60

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV---- 133
           E +N+    FP +     +LL    +  + G   +A       I  +PES  V       
Sbjct: 61  EAYNEYIVKFPESDNIPSALLRVGNIYDNLGDNNKARITYLRLINNHPESIYVSDAKLKV 120

Query: 134 ---YYLVGM-----SYAQMIRDVPYDQ-------------RATKLMLQYMSRIVERYTN- 171
              Y+  G+     +Y+  I     D                 ++ L   S  +  + N 
Sbjct: 121 LEDYFKQGLFEDVINYSSNIFSENPDNLSGNYLSKAYTLVGDAQIALSQPSDALVSFFNA 180

Query: 172 -SPYVKGARF----YVTVGRNQLAAKEVE------------------IGRYYLKRGEYVA 208
            S   +         +    +QL   ++                   IG  Y +  +Y  
Sbjct: 181 GSRNTENGNEIIDTKLNNAFSQLEDNDINFLIESTKDNNLKGYLLYRIGVRYYETQKYKE 240

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           A   F+ ++      E+ +EA   L + Y  
Sbjct: 241 AETVFKDLIKQIPGHENVKEAKIYLQKIYKN 271



 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 50/152 (32%), Gaps = 26/152 (17%)

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           K+L   A   +S  KY +A     EYI ++PES N+      VG  Y  +  +       
Sbjct: 41  KALFSKAENLFSTQKYNRALEAYNEYIVKFPESDNIPSALLRVGNIYDNLGDN------- 93

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
                    R++  +  S YV  A+  V                 Y K+G +   I    
Sbjct: 94  -NKARITYLRLINNHPESIYVSDAKLKVLED--------------YFKQGLFEDVINYSS 138

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
            + +   D          L +AY  +     A
Sbjct: 139 NIFSENPDNLSG----NYLSKAYTLVGDAQIA 166



 Score = 43.6 bits (102), Expect = 0.026,   Method: Composition-based stats.
 Identities = 9/67 (13%), Positives = 27/67 (40%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
               +Y  A+  +   +  + ++++   A+ R+   Y  L   ++AR     +   +P+ 
Sbjct: 51  FSTQKYNRALEAYNEYIVKFPESDNIPSALLRVGNIYDNLGDNNKARITYLRLINNHPES 110

Query: 261 YWARYVE 267
            +    +
Sbjct: 111 IYVSDAK 117



 Score = 40.5 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 47/137 (34%), Gaps = 18/137 (13%)

Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
            G +      ++   Q+  +  L+  +  + ++  S  +  A                 +
Sbjct: 39  RGKALFSKAENLFSTQKYNR-ALEAYNEYIVKFPESDNIPSALLR--------------V 83

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           G  Y   G+   A   +  ++ N+ ++ +  +A  +++E Y    L ++     S I   
Sbjct: 84  GNIYDNLGDNNKARITYLRLINNHPESIYVSDAKLKVLEDYFKQGLFEDVINYSSNIFSE 143

Query: 257 YPQG---YWARYVETLV 270
            P      +     TLV
Sbjct: 144 NPDNLSGNYLSKAYTLV 160


>gi|315453239|ref|YP_004073509.1| paralysed flagellum protein, PflA [Helicobacter felis ATCC 49179]
 gi|315132291|emb|CBY82919.1| paralysed flagellum protein, PflA [Helicobacter felis ATCC 49179]
          Length = 790

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 40/125 (32%), Gaps = 9/125 (7%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS-AGKYQQAASLGEE 119
           Y +    + EQ++  A +        +P     +   L           +      +GE 
Sbjct: 184 YLQVKKLMGEQSYLAALKAIGNIFETYPKTLFRKDLYLYEMIALDKLNKRQDLLLQIGER 243

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           ++  YP    V +V YL G +Y ++           K       R +  Y  S Y   ++
Sbjct: 244 WLKLYPADPKVPHVLYLTGTAYDRI--------NHAKQAQNQFQRAIIEYPGSRYAPLSQ 295

Query: 180 FYVTV 184
             +  
Sbjct: 296 MRLAE 300


>gi|254417406|ref|ZP_05031148.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
 gi|196175841|gb|EDX70863.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
          Length = 250

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 63/199 (31%), Gaps = 36/199 (18%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
               L +  + +A   F         +       +  A      GK  +A  + EE I +
Sbjct: 70  GNTLLAQNKWDEAVAVFQDLIAR---SPKTVDGYVKLAQALIEQGKLDEAMPIVEELIQR 126

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
           +P++ ++ +   L+ +S    +  +          ++    + ++  +      A   + 
Sbjct: 127 HPQNTDIPFSVGLI-LSNINRLDTL----------IESYQTLSQQSPD-----KAILRLN 170

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA-NYSDAEHAEEAMARLVEAYVALAL 242
           +  + +                + AAI  +Q  +  N        +A   L +A      
Sbjct: 171 LANSWMIQ------------ENWQAAIDEYQEAIRLNIKK----PQAYWYLGDALRQKGQ 214

Query: 243 MDEAREVVSLIQERYPQGY 261
           +DEA  V      RYP   
Sbjct: 215 LDEALSVWREAIVRYPNDQ 233


>gi|77920563|ref|YP_358378.1| TPR domain-containing protein [Pelobacter carbinolicus DSM 2380]
 gi|77546646|gb|ABA90208.1| TPR domain protein [Pelobacter carbinolicus DSM 2380]
          Length = 266

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 18/149 (12%), Positives = 52/149 (34%), Gaps = 9/149 (6%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQCSRDFPFAGVARK 95
                ++  V             VY +AV  +++ +++++  +   +  +  P   +A  
Sbjct: 123 SSATGNTAPVVQLPKAGAAQPETVYLQAVDAIRKQKHYAEGRKQLEEFLQKNPGHSLAPN 182

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +            +Y++A    E+ I +Y +       Y   G+++ Q+           
Sbjct: 183 AAYWIGESYAGEKEYEKAILQFEDVIQKYGDHPKAAAAYLKQGLTFDQLGDR-------- 234

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTV 184
           +     + ++V+ +  S     A+  +  
Sbjct: 235 QSARAILEKLVKSFPLSGEAGIAKERLKA 263



 Score = 38.6 bits (89), Expect = 0.92,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 42/130 (32%), Gaps = 14/130 (10%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
                D    Q+      + +   +++         A ++              IG  Y 
Sbjct: 147 YLQAVDAIRKQKHYAEGRKQLEEFLQKNPGHSLAPNAAYW--------------IGESYA 192

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
              EY  AI +F+ V+  Y D   A  A  +    +  L     AR ++  + + +P   
Sbjct: 193 GEKEYEKAILQFEDVIQKYGDHPKAAAAYLKQGLTFDQLGDRQSARAILEKLVKSFPLSG 252

Query: 262 WARYVETLVK 271
            A   +  +K
Sbjct: 253 EAGIAKERLK 262


>gi|15835449|ref|NP_297208.1| hypothetical protein TC0835 [Chlamydia muridarum Nigg]
 gi|270285630|ref|ZP_06195024.1| hypothetical protein CmurN_04308 [Chlamydia muridarum Nigg]
 gi|270289639|ref|ZP_06195941.1| hypothetical protein CmurW_04358 [Chlamydia muridarum Weiss]
 gi|301337026|ref|ZP_07225228.1| hypothetical protein CmurM_04310 [Chlamydia muridarum MopnTet14]
 gi|7190863|gb|AAF39635.1| conserved hypothetical protein [Chlamydia muridarum Nigg]
          Length = 318

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 54/161 (33%), Gaps = 14/161 (8%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS--LLMSA 101
            ++   S         +Y K  L   ++ +S+A +   + S  FP   ++ K+  L+   
Sbjct: 158 DEIVTASSDVDLKADALYSKGALLFAQKEYSEAIKTLKKVSLQFPSHSLSPKAFSLIAKI 217

Query: 102 FVQ------YSAGKYQQAASLGEEYITQYPESK-NVDYVYYLVGMS--YAQMIRDVPYDQ 152
           +        Y+    Q A +       Q+P    N +   Y+  M   YA  +       
Sbjct: 218 YCLQALQEPYNEQYLQDARANAAALRKQHPNHPSNSEVANYIHRMCEAYASCLYSTGRFY 277

Query: 153 RATKLMLQ---YMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
              +       Y S  +E +  + YV      +     Q++
Sbjct: 278 EKKRKASSAKMYYSIALESFPETSYVAKCNKRLERLSKQIS 318



 Score = 42.0 bits (98), Expect = 0.088,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 51/131 (38%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           ++  +Y +A    ++   Q+P        + L+   Y       PY+++  +      + 
Sbjct: 182 FAQKEYSEAIKTLKKVSLQFPSHSLSPKAFSLIAKIYCLQALQEPYNEQYLQDARANAAA 241

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           + +++ N P       Y+       A+     GR+Y K+ +  +A   + + L ++ +  
Sbjct: 242 LRKQHPNHPSNSEVANYIHRMCEAYASCLYSTGRFYEKKRKASSAKMYYSIALESFPETS 301

Query: 225 HAEEAMARLVE 235
           +  +   RL  
Sbjct: 302 YVAKCNKRLER 312



 Score = 37.8 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 71/233 (30%), Gaps = 39/233 (16%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
               T        +EK   + + + F +A   F   +  FP   +  K+  ++       
Sbjct: 34  PKKYTPKYSPELYFEKGDHYFQAKKFKQALLCFGMITHHFPEHALRPKAQFLTGICYLEM 93

Query: 108 GKYQQAASLGEEYITQYPESKNVDY------VYYLVGMSYAQ-------MIRDVPYDQRA 154
           G    A     +Y        + +Y      + Y +  S+A         +   P   +A
Sbjct: 94  GHPDLADKALTQYQEL----SDTEYSEQLFSIKYSIAQSFANGKRKNIVALEGFPKLLKA 149

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
               L+    IV   ++      A +         A KE            Y  AI   +
Sbjct: 150 DTDALRIFDEIVTASSDVDLKADALYSKGAL--LFAQKE------------YSEAIKTLK 195

Query: 215 LVLANYSDAEHAEEAMARLVEAY--------VALALMDEAREVVSLIQERYPQ 259
            V   +     + +A + + + Y             + +AR   + +++++P 
Sbjct: 196 KVSLQFPSHSLSPKAFSLIAKIYCLQALQEPYNEQYLQDARANAAALRKQHPN 248


>gi|323697458|ref|ZP_08109370.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
           sp. ND132]
 gi|323457390|gb|EGB13255.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
           desulfuricans ND132]
          Length = 1110

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 44/103 (42%), Gaps = 14/103 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
               Y   + ++Y +   +                     G Y+ ++G+Y  A  +FQ +
Sbjct: 558 EARAYFKILQDKYPDDDNIPSIS--------------YYWGEYWYRKGDYKKAADQFQQL 603

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           +  Y + + A++A   L ++   L  +D+A ++V  I +R+P 
Sbjct: 604 IQTYPEHQLAKQAAYYLADSLDRLGYLDQAYQIVDYIDKRWPD 646



 Score = 50.1 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/275 (14%), Positives = 80/275 (29%), Gaps = 69/275 (25%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           + +      D       Y     + ++ ++ KA + F Q  + +P   +A+++    A  
Sbjct: 564 KILQDKYPDDDNIPSISYYWGEYWYRKGDYKKAADQFQQLIQTYPEHQLAKQAAYYLADS 623

Query: 104 QYSAGKYQQAASLGE--------------EYIT------------------------QYP 125
               G   QA  + +              E++                           P
Sbjct: 624 LDRLGYLDQAYQIVDYIDKRWPDYYMENMEFLRLAGGVEMQLKKWDPAKNHYFTYYNLNP 683

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV- 184
           E+   D V   +G  Y +       +Q+      Q   + V+ + +      A+  +   
Sbjct: 684 EADGADVVLARIGDIYLR------KNQKDA--AKQVYEKAVKDFPDKEGGLIAKMRLAEE 735

Query: 185 -GRNQLAAKEVEIGRYYLKRGEYVAAIPR---------FQLVLANYSDAEHAEEAMARLV 234
              +  A  E+            V    R         +  +++ + D+  A  A  +L 
Sbjct: 736 GIYDDPAMNEM------------VDVFNRPYNLNPKRVYTEIVSQHPDSPLAPIAQLKLA 783

Query: 235 EAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
             +       EA      + E+YP    A    TL
Sbjct: 784 MWHAFHKQYPEALTAAQDLIEKYPDSPLADKARTL 818



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 69/203 (33%), Gaps = 45/203 (22%)

Query: 69  KEQNFSKAYEYFNQCSRDFP-----------FAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +  NF +A  YF      +P           +               Y  G Y++AA   
Sbjct: 552 QVGNFPEARAYFKILQDKYPDDDNIPSISYYWGEY-----------WYRKGDYKKAADQF 600

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           ++ I  YPE +      Y +  S  ++               Q +  I +R+ +  Y   
Sbjct: 601 QQLIQTYPEHQLAKQAAYYLADSLDRL--------GYLDQAYQIVDYIDKRWPD--YYME 650

Query: 178 ARFYVTVGRNQLAAK-EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
               +   R  LA   E+++        ++  A   +        +A+ A+  +AR+ + 
Sbjct: 651 ---NMEFLR--LAGGVEMQL-------KKWDPAKNHYFTYYNLNPEADGADVVLARIGDI 698

Query: 237 YVALALMDEAREVVSLIQERYPQ 259
           Y+     D A++V     + +P 
Sbjct: 699 YLRKNQKDAAKQVYEKAVKDFPD 721


>gi|294645888|ref|ZP_06723564.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a]
 gi|292638768|gb|EFF57110.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a]
          Length = 383

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 39/267 (14%), Positives = 75/267 (28%), Gaps = 55/267 (20%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
           +C  +            D  T       +Y++     +E+N++ A        +  P A 
Sbjct: 9   ICAAICCTPIIGFAQTGDKFTST---DNLYKEGKELFQERNYAAALPALKAFVKQKPAAS 65

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA--------- 142
           + + +  M     Y      +   L  +Y+ +YP++   + +Y L+   Y          
Sbjct: 66  LLQDAEYMLVSSAYELKDKNR-IELLRKYLDRYPDTPYANRIYALLASCYFYEGKYDEAL 124

Query: 143 --------QMIRDVPYDQ------------RATKLMLQYMSRIVERYTNSPYVKGARFYV 182
                    ++ +   D                +    +   +        Y K   +Y+
Sbjct: 125 ALFNSADLDLLGNEERDDCTYQLATCYLKTDNLREAAIWFETLRANSP--KYAKDCDYYL 182

Query: 183 TVGRNQLAAKE--------------------VEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
           +  R                             I   Y +   Y  A    Q  L+ Y +
Sbjct: 183 SYIRYTQKRYSEALKGFLPLQDDSKYKALVPYYIAEIYTQLKNYDKAQIVAQNYLSAYPN 242

Query: 223 AEHAEEAMARLVEAYVALALMDEAREV 249
            EHA E    L +AY       +A E 
Sbjct: 243 NEHAAEMYRILGDAYYHFGQYHQAVEA 269



 Score = 44.3 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 65/190 (34%), Gaps = 28/190 (14%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A  +LK  N  +A  +F     + P    A+      ++++Y+  +Y +A    + +
Sbjct: 145 YQLATCYLKTDNLREAAIWFETLRANSP--KYAKDCDYYLSYIRYTQKRYSEAL---KGF 199

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +    +SK    V Y +   Y Q+        +            +  Y N+ +      
Sbjct: 200 LPLQDDSKYKALVPYYIAEIYTQL--------KNYDKAQIVAQNYLSAYPNNEHAAEMYR 251

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
            +              G  Y   G+Y  A+  F   L     +    +A+  L  +Y   
Sbjct: 252 IL--------------GDAYYHFGQYHQAVEAFNNYLNK-DRSAPRRDALYMLGLSYYQT 296

Query: 241 ALMDEAREVV 250
            +  +A E +
Sbjct: 297 KVYSKAAETL 306


>gi|254361240|ref|ZP_04977383.1| lipopolysaccharide N-acetylglucosaminyltransferase [Mannheimia
           haemolytica PHL213]
 gi|261492537|ref|ZP_05989090.1| lipopolysaccharide N-acetylglucosaminyltransferase [Mannheimia
           haemolytica serotype A2 str. BOVINE]
 gi|261495210|ref|ZP_05991672.1| lipopolysaccharide N-acetylglucosaminyltransferase [Mannheimia
           haemolytica serotype A2 str. OVINE]
 gi|153092736|gb|EDN73779.1| lipopolysaccharide N-acetylglucosaminyltransferase [Mannheimia
           haemolytica PHL213]
 gi|261309135|gb|EEY10376.1| lipopolysaccharide N-acetylglucosaminyltransferase [Mannheimia
           haemolytica serotype A2 str. OVINE]
 gi|261311696|gb|EEY12846.1| lipopolysaccharide N-acetylglucosaminyltransferase [Mannheimia
           haemolytica serotype A2 str. BOVINE]
          Length = 398

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 77/179 (43%), Gaps = 33/179 (18%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A  F+    + +A  Y+     +  FA  +  S L   +      ++++A ++ E+ +  
Sbjct: 122 AKDFMVAGFYDRAENYYISLVDEPEFAKYS-LSQLAVIY--QKTREWKKAINVTEKRLRI 178

Query: 124 YPESKNVDYVYYLVGMSYA--QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
            P++  +        +S+   +  + V +D +A    ++ +++ +E Y  S         
Sbjct: 179 EPDADKIP-------LSHFYCEYAQGVKFDDKAAF--IESLNKALEYYPQSTRAS----- 224

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
                       + +G +YL+ GEY+ A+  F+ +L    D  +  E + R+ ++Y+AL
Sbjct: 225 ------------IILGDFYLEEGEYLRALSYFEQILVQDPD--YISEVLGRIKQSYMAL 269


>gi|153951092|ref|YP_001397810.1| putative lipoprotein [Campylobacter jejuni subsp. doylei 269.97]
 gi|152938538|gb|ABS43279.1| putative lipoprotein [Campylobacter jejuni subsp. doylei 269.97]
          Length = 215

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 70/179 (39%), Gaps = 18/179 (10%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L +F SI   F      ++   +Y  S ++       Y++ +  L++++  KA +++N  
Sbjct: 7   LLVFLSI---FFNACSTKNDEGLYNLSASEW------YKQIIKDLQDKDLEKADDHYNGM 57

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
           + +     +   +L++ A       +Y+ A    +EY  ++  S+N DY+ YL   +   
Sbjct: 58  ASEHVADPLLETTLIILAQAHMDEEEYKLAEFYLDEYNKKFGNSRNTDYIRYLKIKAKFD 117

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
                  +Q       + +   ++ Y  + Y    +  +T            +  +YL 
Sbjct: 118 AFAVPNRNQALMLESQKEIDTFLKDYPYTEYEPLVQTMLTK---------FNLAVFYLN 167


>gi|149921884|ref|ZP_01910328.1| peptidase C1A, papain [Plesiocystis pacifica SIR-1]
 gi|149817237|gb|EDM76714.1| peptidase C1A, papain [Plesiocystis pacifica SIR-1]
          Length = 650

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 31/90 (34%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
              +   ++++ A        +++A   F       P +     +L      ++    Y 
Sbjct: 511 EPDQDPSDLFDAAYDLFGAGKYAEAKAEFAAWKAQNPTSPDVPYALYFMGVAEHQLDNYW 570

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSY 141
            +     E+   + +   + YVYY  G SY
Sbjct: 571 DSLLYFAEFADHHSDHDWLPYVYYWAGSSY 600



 Score = 42.0 bits (98), Expect = 0.095,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 26/50 (52%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
           L  +A+  + AGKY +A +    +  Q P S +V Y  Y +G++  Q+  
Sbjct: 519 LFDAAYDLFGAGKYAEAKAEFAAWKAQNPTSPDVPYALYFMGVAEHQLDN 568


>gi|302339692|ref|YP_003804898.1| hypotheticalprotein [Spirochaeta smaragdinae DSM 11293]
 gi|301636877|gb|ADK82304.1| TPR repeat-containing protein [Spirochaeta smaragdinae DSM 11293]
          Length = 962

 Score = 52.4 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 20/140 (14%), Positives = 53/140 (37%), Gaps = 9/140 (6%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S+        ++ +A    ++ ++  A + + +  R +P +     +    A + Y  GK
Sbjct: 26  SLAAQDEASALFREAETRFRKGDYLFALQRYEELIRQYPVSEYVADAQFRRAVILYRTGK 85

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            ++A SL E    +Y  ++   Y+ +  G++   + R         +     ++  +   
Sbjct: 86  AEEALSLFERVEKRYASTRFRRYIPFWKGVALFTLDR--------FESAASALATYLASS 137

Query: 170 TNSPYVKGARFYVTVGRNQL 189
            +      A  Y+ +   +L
Sbjct: 138 PD-QLQAEAGRYLALSYQKL 156



 Score = 42.4 bits (99), Expect = 0.072,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 60/186 (32%), Gaps = 14/186 (7%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
               +YE A +     N  +A   + Q  + F  +  A  +L     + + +G+Y++A  
Sbjct: 651 ADDALYEYAQMMQNNGNDEEAIRSYYQLWQQFKSSPYAGDALYNRGELLFLSGQYRKAGE 710

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
               Y T++P+   VD   +   ++           + A    +    ++++ +  S + 
Sbjct: 711 AFYFYRTRFPKGALVDASLHYGALA--------ARKEAAPFQAVLLWEKLIDEHPKSAFY 762

Query: 176 KGARFYVTVGRNQLAAKEVEIG------RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
             A         Q       I        +Y    +   A    + +          E A
Sbjct: 763 PEALQGCAELYRQAGEYRKSIAMYTKLLDFYPDIAKKANAEREIETLGKMLQGTGSREAA 822

Query: 230 MARLVE 235
           +   +E
Sbjct: 823 LQVTIE 828



 Score = 42.4 bits (99), Expect = 0.073,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 48/137 (35%), Gaps = 23/137 (16%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           +  G Y  A    EE I QYP S+ V    +   +   +            +  L    R
Sbjct: 44  FRKGDYLFALQRYEELIRQYPVSEYVADAQFRRAVILYRT--------GKAEEALSLFER 95

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           + +RY ++ +    R Y+   +         +  + L R  + +A       LA+  D +
Sbjct: 96  VEKRYASTRF----RRYIPFWKG--------VALFTLDR--FESAASALATYLASSPD-Q 140

Query: 225 HAEEAMARLVEAYVALA 241
              EA   L  +Y  L 
Sbjct: 141 LQAEAGRYLALSYQKLG 157



 Score = 41.3 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 76/217 (35%), Gaps = 21/217 (9%)

Query: 75  KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
           +A   + +   + P +    ++L   A +   AG+Y+++ ++  + +  YP+        
Sbjct: 744 QAVLLWEKLIDEHPKSAFYPEALQGCAELYRQAGEYRKSIAMYTKLLDFYPDIAKKANAE 803

Query: 135 YLV----------GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
             +          G   A +   +  +   TK  ++ M  +   Y +  Y +      ++
Sbjct: 804 REIETLGKMLQGTGSREAALQVTIEQESTGTKKGVEAMVELGRLYYD-RYDRQEEKAKSL 862

Query: 185 GRNQLAAKEVE---IGRYYLKRGEYVAAIPRFQLVLANYSDAEH-------AEEAMARLV 234
               +A K+         Y   GE  A     +  + ++ DA         +  ++ R  
Sbjct: 863 LEKVVAEKDRFPAPAAEAYYLLGEMAAEKGEAKKAVEHFLDAAALGGEGDTSARSLYRAA 922

Query: 235 EAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           E        D A+ +V  I+  +P   W      L++
Sbjct: 923 EVAADAGDHDLAQTMVRQIERSFPDSEWTLRGRELLE 959



 Score = 39.3 bits (91), Expect = 0.50,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 85/238 (35%), Gaps = 35/238 (14%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
           VY D+       R  Y          ++  A   F + SR    +  A K L M A    
Sbjct: 569 VYTDNPDHELSARSRYLSGWALYTLGSYKDAALAFGEYSRQMSGSE-AEKGLFMYAKSYA 627

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
           +AG   +A+S  +E ++    S   D   Y     YAQM+++   D    +  ++   ++
Sbjct: 628 AAGDVGRASSGFQE-LSGKKSSAYADDALY----EYAQMMQNNGND----EEAIRSYYQL 678

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR-YYLKRG------------EYVAAIPR 212
            +++ +SPY   A +        L+ +  + G  +Y  R              Y A   R
Sbjct: 679 WQQFKSSPYAGDALYNRGELL-FLSGQYRKAGEAFYFYRTRFPKGALVDASLHYGALAAR 737

Query: 213 -----FQLV------LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
                FQ V      +  +  +    EA+    E Y       ++  + + + + YP 
Sbjct: 738 KEAAPFQAVLLWEKLIDEHPKSAFYPEALQGCAELYRQAGEYRKSIAMYTKLLDFYPD 795



 Score = 38.9 bits (90), Expect = 0.70,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 33/67 (49%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            ++G+Y+ A+ R++ ++  Y  +E+  +A  R           +EA  +   +++RY   
Sbjct: 44  FRKGDYLFALQRYEELIRQYPVSEYVADAQFRRAVILYRTGKAEEALSLFERVEKRYAST 103

Query: 261 YWARYVE 267
            + RY+ 
Sbjct: 104 RFRRYIP 110



 Score = 35.1 bits (80), Expect = 9.4,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 67/208 (32%), Gaps = 25/208 (12%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D+      Y       +   +S+A ++F     D P   ++ +S  +S +  Y+ G Y+ 
Sbjct: 540 DITPYARFYA-GWAAYRTGAYSRAVDFFRAVYTDNPDHELSARSRYLSGWALYTLGSYKD 598

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           AA    EY  Q   S+  +   ++   SYA                      +  +  +S
Sbjct: 599 AALAFGEYSRQMSGSE-AEKGLFMYAKSYAAA--------GDVGRASSGFQELSGKK-SS 648

Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
            Y   A +            E  I  YY               +   +  + +A +A+  
Sbjct: 649 AYADDALYEYAQMMQNNGNDEEAIRSYY--------------QLWQQFKSSPYAGDALYN 694

Query: 233 LVEAYVALALMDEAREVVSLIQERYPQG 260
             E         +A E     + R+P+G
Sbjct: 695 RGELLFLSGQYRKAGEAFYFYRTRFPKG 722


>gi|163745827|ref|ZP_02153186.1| hypothetical protein OIHEL45_09583 [Oceanibulbus indolifex HEL-45]
 gi|161380572|gb|EDQ04982.1| hypothetical protein OIHEL45_09583 [Oceanibulbus indolifex HEL-45]
          Length = 295

 Score = 52.4 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 51/147 (34%), Gaps = 14/147 (9%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G     S    ++       ++  +E+A   L   +F  A + F   S+ +P   +A ++
Sbjct: 152 GASTSGSIITPINEAELAVSEKTDFERAQGALASGDFRSAADLFATFSQTYPGGPLAAEA 211

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQY---PESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
            L         G  ++AA     ++  +   PE        + +G S   +         
Sbjct: 212 ELRRGEALTGLGDNREAARA---FLAAFSADPEGPVAPQSLFELGRSLGTL--------E 260

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARF 180
            T+     +S +  R+  +P V  A  
Sbjct: 261 QTQEACVTLSEVAVRFPGAPQVSQAEA 287



 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 33/118 (27%), Gaps = 19/118 (16%)

Query: 147 DVPYDQRA-----TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
           D    Q A      +      +   + Y   P    A          L     E  R   
Sbjct: 175 DFERAQGALASGDFRSAADLFATFSQTYPGGPLAAEAELRRGEALTGLGDNR-EAAR--- 230

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
               ++AA        +   +   A +++  L  +   L    EA   +S +  R+P 
Sbjct: 231 ---AFLAA-------FSADPEGPVAPQSLFELGRSLGTLEQTQEACVTLSEVAVRFPG 278


>gi|260565804|ref|ZP_05836287.1| TPR repeat-containing protein [Brucella melitensis bv. 1 str. 16M]
 gi|260151177|gb|EEW86272.1| TPR repeat-containing protein [Brucella melitensis bv. 1 str. 16M]
          Length = 151

 Score = 52.4 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 50/127 (39%), Gaps = 8/127 (6%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           +  + S+        +Y+ A  +L   ++  A   F +  + +P   +  ++        
Sbjct: 15  NDAVASLPTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESL 74

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y  G+Y +AA+L  +    YP+SK      + +GM+  +M            +     ++
Sbjct: 75  YGQGRYPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNH--------DVACATFAQ 126

Query: 165 IVERYTN 171
           I +RY  
Sbjct: 127 IPQRYPK 133



 Score = 39.7 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 8/104 (7%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           SL  +A+    +G Y+ A +   E++ +YP         + +G S     R         
Sbjct: 29  SLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYP------- 81

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
                        Y +S       F + +   ++   +V    +
Sbjct: 82  -EAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATF 124



 Score = 35.5 bits (81), Expect = 9.1,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 14/107 (13%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K         V+RY   P    ARF++                    +G Y  A   
Sbjct: 41  GDYKAAEAGFREHVKRYPADPMTAEARFWLGESL--------------YGQGRYPEAATL 86

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           F     +Y D++ A E M +L  A   +   D A    + I +RYP+
Sbjct: 87  FIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYPK 133



 Score = 35.1 bits (80), Expect = 9.6,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 23/68 (33%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +    YL  G+Y AA   F+  +  Y       EA   L E+        EA  +    
Sbjct: 31  YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 90

Query: 254 QERYPQGY 261
           Q  YP   
Sbjct: 91  QRDYPDSK 98


>gi|254448725|ref|ZP_05062183.1| conserved hypothetical protein [gamma proteobacterium HTCC5015]
 gi|198261733|gb|EDY86020.1| conserved hypothetical protein [gamma proteobacterium HTCC5015]
          Length = 426

 Score = 52.4 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 50/126 (39%), Gaps = 7/126 (5%)

Query: 67  FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
           +++     +A           P   ++ +   + A   Y + +Y++ A L   +  ++P+
Sbjct: 306 YMENGFAPEAVSLAEHALEKHPTMEMSDQLEWLLAKTYYESLQYKKVAKLLNGFHKRHPK 365

Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
           S+ +   Y LV + +   +  +  DQ         +  IV+ Y   P    A+ Y+ V  
Sbjct: 366 SELIPDAYMLVAVMF---VDRLDNDQ----KAQPILKYIVKTYPEHPQAAKAQQYLKVVE 418

Query: 187 NQLAAK 192
              AAK
Sbjct: 419 ASTAAK 424



 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 61/186 (32%), Gaps = 38/186 (20%)

Query: 65  VLFLKEQNFSKAYEYFNQCSRDFP-----------------FAGVARKSLLMSAFVQYSA 107
             F++E+N+  A        +D P                  +                 
Sbjct: 250 ERFIQEENYEAAMGELTVLIKDHPDDVALRKKQANLVRHIDTSHYYETPGRSLIRWYMEN 309

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           G   +A SL E  + ++P  +  D + +L+  +Y + ++         K + + ++   +
Sbjct: 310 GFAPEAVSLAEHALEKHPTMEMSDQLEWLLAKTYYESLQ--------YKKVAKLLNGFHK 361

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
           R+  S  +  A  Y+ V         + +     +      A P  + ++  Y +   A 
Sbjct: 362 RHPKSELIPDA--YMLVAV-------MFV----DRLDNDQKAQPILKYIVKTYPEHPQAA 408

Query: 228 EAMARL 233
           +A   L
Sbjct: 409 KAQQYL 414


>gi|170288929|ref|YP_001739167.1| TPR repeat-containing protein [Thermotoga sp. RQ2]
 gi|170176432|gb|ACB09484.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga sp. RQ2]
          Length = 357

 Score = 52.4 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 86/239 (35%), Gaps = 41/239 (17%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           LD   +     E+  K  L +++    +  ++ ++     P      ++        Y+ 
Sbjct: 124 LDIDENYAPAYEL--KGSLLVEQGKIEEGIKFLDKAVEIDP---WLVQAYASLGEAYYNL 178

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           G Y++A    E  +   P  K     Y+++  +Y +M R          L ++ + R++E
Sbjct: 179 GDYEKAIHYWERELEYNPSDKIT---YFMITEAYHEMNRK--------DLAVKALERLLE 227

Query: 168 RYTNS-----------------PYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAA 209
              ++                    +     +   + +    E+E   R  LK G Y   
Sbjct: 228 IDPDNIPALYQLSQLYRELGSEEKAREMEEKIMNCKPK-YPTELEPWARVMLKHGRYKEV 286

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           +   + ++ +   +     A   LV  YV L  +D+ARE++  I +     +W  Y + 
Sbjct: 287 VEELEKIVES---SPLNTLARLLLVVPYVKLGQIDKAREILDDIGQ---SNFWYYYGKK 339


>gi|87311428|ref|ZP_01093548.1| hypothetical protein DSM3645_25332 [Blastopirellula marina DSM
           3645]
 gi|87285840|gb|EAQ77754.1| hypothetical protein DSM3645_25332 [Blastopirellula marina DSM
           3645]
          Length = 984

 Score = 52.4 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/287 (13%), Positives = 83/287 (28%), Gaps = 85/287 (29%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++ +    ++ ++F+ A + +    +  P      ++    A   Y     + A +  E 
Sbjct: 69  LFYRGEALIQLEDFADARKSYQDFLQRVPTHDNRTQAEFRVAECYYLTHDLEAAQTQFET 128

Query: 120 YITQYPESKNVDYVY-YL--VGMSY--AQMIRDVPYDQRATKLML----QYMSRIVERYT 170
           +IT +P+     +   YL  + ++     M   +    +A    L    +    +     
Sbjct: 129 FITAHPDHALYAHALPYLGEIALADQDYDMAEQLFRKAKAAAPSLAMQGEAELGLARTLR 188

Query: 171 NS--------PYVKGARFYVTVGRN----------QLAAK-------------------- 192
           +S         Y    +  +T   +          +L                       
Sbjct: 189 DSGQLHAARTAYRAALKQELTEAHDAKFELGVLEYRLGEHRVAVEHLTEVAQAGDRHSDI 248

Query: 193 -EVEIGRYYLKRGEYVAAIPRFQLV----------------------------------- 216
            ++ I + Y +  ++  A  R Q +                                   
Sbjct: 249 AKLWIAKAYYEVRDWPQAEQRLQELAQEEKLSQYRDEIDYLSARIRLEQGETSEGLTQLE 308

Query: 217 --LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             LAN+  +   +EA+  L EA V    +D+A      +   YPQ  
Sbjct: 309 QLLANHPASPWCDEALFYLAEAAVVTGDLDKATTTAKRLIVEYPQRE 355



 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 47/157 (29%), Gaps = 22/157 (14%)

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
            QY+   ++ A    + ++  YP+      + +  G +  Q+               +  
Sbjct: 38  SQYARKDWEAAIVAFDRFLYDYPDHSLTGALLFYRGEALIQLEDFAD--------ARKSY 89

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
              ++R         A              E  +   Y    +  AA  +F+  +  + D
Sbjct: 90  QDFLQRVPTHDNRTQA--------------EFRVAECYYLTHDLEAAQTQFETFITAHPD 135

Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
                 A+  L E  +A    D A ++    +   P 
Sbjct: 136 HALYAHALPYLGEIALADQDYDMAEQLFRKAKAAAPS 172



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 49/153 (32%), Gaps = 11/153 (7%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             E+Y  A      +++  A   F++   D+P   +    L            +  A   
Sbjct: 29  AAELYAVAASQYARKDWEAAIVAFDRFLYDYPDHSLTGALLFYRGEALIQLEDFADARKS 88

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            ++++ + P   N     + V   Y      + +D  A +         +  + +     
Sbjct: 89  YQDFLQRVPTHDNRTQAEFRVAECYY-----LTHDLEAAQTQ---FETFITAHPDHALYA 140

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
            A  Y+      LA ++ ++    L R    AA
Sbjct: 141 HALPYLGEI--ALADQDYDMAEQ-LFRKAKAAA 170



 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 69/207 (33%), Gaps = 32/207 (15%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVA-------RKSLLMSAFVQYSAGKYQQAASL 116
           A     +  FS+A + FN+         +A       R++ L         G + +A  L
Sbjct: 778 AESLFHQHKFSEASKLFNEVEALTRGRELAWNSTVALRRAQLA---AH--LGDWDEALRL 832

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            E     +P+ +    + YL G   A+                +   R+++         
Sbjct: 833 AELAAVSHPDFEQRFELDYLRGRCLARQANFAG--------ARRAYQRVID--------- 875

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                +       A  +  IG  Y  +  Y +AI  +  V A Y        ++ ++ + 
Sbjct: 876 ---SRLGGASETAAMAQWMIGETYFHQKNYQSAIQAYSRVAALYDFPRWKAGSLLQIGKC 932

Query: 237 YVALALMDEAREVVSLIQERYPQGYWA 263
           Y      D+A+     +   YP+ ++A
Sbjct: 933 YEISRQWDKAQTYYDEVSAGYPETFFA 959



 Score = 41.3 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 27/73 (36%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A + L++   S+      Q   + P +    ++L   A      G   +A +  +  
Sbjct: 288 YLSARIRLEQGETSEGLTQLEQLLANHPASPWCDEALFYLAEAAVVTGDLDKATTTAKRL 347

Query: 121 ITQYPESKNVDYV 133
           I +YP+ +     
Sbjct: 348 IVEYPQREATPQA 360



 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 37/132 (28%), Gaps = 14/132 (10%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQ-CSRDFPF-AGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           Y +     ++ NF+ A   + +         +  A  +  M     +    YQ A     
Sbjct: 851 YLRGRCLARQANFAGARRAYQRVIDSRLGGASETAAMAQWMIGETYFHQKNYQSAIQAYS 910

Query: 119 EYITQY--PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
                Y  P  K        +G  Y           R       Y   +   Y  + +  
Sbjct: 911 RVAALYDFPRWKAGS--LLQIGKCYEIS--------RQWDKAQTYYDEVSAGYPETFFAG 960

Query: 177 GARFYVTVGRNQ 188
            A+  ++V R +
Sbjct: 961 EAQQRLSVVRQR 972


>gi|332305766|ref|YP_004433617.1| tol-pal system protein YbgF [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332173095|gb|AEE22349.1| tol-pal system protein YbgF [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 250

 Score = 52.4 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 45/128 (35%), Gaps = 15/128 (11%)

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           +Y + +  +  D +     +      ++ Y NS Y   A +++                 
Sbjct: 131 AYDKAVNLILKD-KLYDDAIPEFQSFLQNYPNSSYASNAHYWLGQLL------------- 176

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
              + ++ AA  +F  ++  + D+    +AM +L       + +  A ++   +   YP 
Sbjct: 177 -FNKQDWAAAANQFDTLITQFPDSSKRADAMLKLGICEQERSNIARAEQLWKKVVAEYPN 235

Query: 260 GYWARYVE 267
               +  E
Sbjct: 236 SSARKLAE 243



 Score = 50.1 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 52/131 (39%), Gaps = 9/131 (6%)

Query: 57  QREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           + + Y+KAV   LK++ +  A   F    +++P +  A  +      + ++   +  AA+
Sbjct: 128 EDQAYDKAVNLILKDKLYDDAIPEFQSFLQNYPNSSYASNAHYWLGQLLFNKQDWAAAAN 187

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
             +  ITQ+P+S         +G+           ++       Q   ++V  Y NS   
Sbjct: 188 QFDTLITQFPDSSKRADAMLKLGIC--------EQERSNIARAEQLWKKVVAEYPNSSAR 239

Query: 176 KGARFYVTVGR 186
           K A   +   +
Sbjct: 240 KLAEIKLNAVK 250


>gi|119383440|ref|YP_914496.1| hypothetical protein Pden_0688 [Paracoccus denitrificans PD1222]
 gi|119373207|gb|ABL68800.1| conserved hypothetical protein [Paracoccus denitrificans PD1222]
          Length = 309

 Score = 52.4 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 46/124 (37%), Gaps = 10/124 (8%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA-ASLGEE 119
           +++A   L + +F +A E F   +       +  ++L +      SAG  + A  +  E 
Sbjct: 167 FDRAREVLGQGDFRRAAELFAAIAETHVGGPLTAEALFLRGTALDSAGDLEGAGVAWLES 226

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           +    P          L+G+S A   +         +    Y+  I+ R+ ++P    A 
Sbjct: 227 FAA-NPNGPQAADA--LLGLSRAMSAK------AGPQEGCFYLQEIIARFPSAPQAAEAE 277

Query: 180 FYVT 183
             + 
Sbjct: 278 RRIA 281


>gi|320167667|gb|EFW44566.1| type 5 protein serine/threonine phosphatase isoform [Capsaspora
           owczarzaki ATCC 30864]
          Length = 490

 Score = 52.4 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 43/135 (31%), Gaps = 19/135 (14%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKY 110
            D +   ++ ++     K+  +  A E ++      P  A          AF    A  Y
Sbjct: 18  ADQKQADKLKDEGNAAFKDGKWQLAIEKYSAAIDLNPTLAPY----FANRAFANIKAENY 73

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A +   + I    +S+ V   YY    +   + R         K  L+ +  +V+   
Sbjct: 74  GYAIADATKAIAL--DSQFVK-AYYRRATANMALGR--------FKDSLKDLQAVVKVAP 122

Query: 171 NSPYVKGARFYVTVG 185
           N      A+  +   
Sbjct: 123 NDK---DAQTKMREC 134


>gi|182680531|ref|YP_001834677.1| tol-pal system protein YbgF [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|182636414|gb|ACB97188.1| tol-pal system protein YbgF [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 395

 Score = 52.4 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 50/139 (35%), Gaps = 29/139 (20%)

Query: 124 YPESKNVDYVY-YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
            P  ++ D    YL               Q+  +   +  +  + + + S     A +Y+
Sbjct: 269 NPTKEDYDLALGYLR--------------QKEYEAAEKSFTAFLAKNSKSRLTPDAIYYL 314

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
                         G  Y +RG    A  ++  +  +Y+++  A EAM RL ++  AL  
Sbjct: 315 --------------GETYYQRGRQREAAEQYLKISTHYANSNRAPEAMLRLGQSLNALGA 360

Query: 243 MDEAREVVSLIQERYPQGY 261
            ++A      I  +YP   
Sbjct: 361 KEQACATFGEIDRKYPNAS 379



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 33/101 (32%), Gaps = 8/101 (7%)

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
             A       +Y+ A      ++ +  +S+      Y +G +Y Q  R         +  
Sbjct: 276 DLALGYLRQKEYEAAEKSFTAFLAKNSKSRLTPDAIYYLGETYYQRGRQ--------REA 327

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
            +   +I   Y NS     A   +    N L AKE     +
Sbjct: 328 AEQYLKISTHYANSNRAPEAMLRLGQSLNALGAKEQACATF 368



 Score = 45.5 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 46/130 (35%), Gaps = 15/130 (11%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
             +E Y+ A+ +L+++ +  A + F         + +   ++       Y  G+ ++A  
Sbjct: 270 PTKEDYDLALGYLRQKEYEAAEKSFTAFLAKNSKSRLTPDAIYYLGETYYQRGRQREA-- 327

Query: 116 LGEEYITQ---YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN- 171
             E+Y+     Y  S         +G S   +         A +        I  +Y N 
Sbjct: 328 -AEQYLKISTHYANSNRAPEAMLRLGQSLNAL--------GAKEQACATFGEIDRKYPNA 378

Query: 172 SPYVKGARFY 181
           SP VK +   
Sbjct: 379 SPQVKASAER 388


>gi|322501245|emb|CBZ36324.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 847

 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 26/209 (12%), Positives = 56/209 (26%), Gaps = 40/209 (19%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           + ++ +A    K +N+++A E +          PF                  G++ +A 
Sbjct: 444 KALFNRAFCEDKLKNYTRAIEDYTAALDLDPRNPFTHY------NLGISYDHKGRHARAM 497

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
                 I       +           +          Q A    +   +  +        
Sbjct: 498 QAFTRAIELDDRHPD-----------FFHNRGFTQRKQGAYAAAIADYTTAISLDPKH-- 544

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRY-------------YLKRGEYVAAIPRFQLVLANY- 220
              + +      ++L   E  +  Y             Y  RG  +A + R +  + N+ 
Sbjct: 545 -FKSHYNRAYCFSKLGRYEEAVADYAAALQIDSGNANAYHNRGAALAKLGRLEAAVENFN 603

Query: 221 ---SDAEHAEEAMARLVEAYVALALMDEA 246
                +     A+      Y  L   D+A
Sbjct: 604 CALRLSPKLTFALNARGLVYDQLQQYDKA 632


>gi|333029576|ref|ZP_08457637.1| Tetratricopeptide TPR_2 repeat-containing protein [Bacteroides
           coprosuis DSM 18011]
 gi|332740173|gb|EGJ70655.1| Tetratricopeptide TPR_2 repeat-containing protein [Bacteroides
           coprosuis DSM 18011]
          Length = 1006

 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 84/240 (35%), Gaps = 48/240 (20%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           T +     ++++     ++++F+ A           P A + +++  M A   Y      
Sbjct: 26  TAITSPDRLFKEGKALFQKESFAAAIPSLKAFVASKPSASLVQEANFMLAVSAYQLKDKN 85

Query: 112 QAASLGEEYITQYPESKNVDYV------------YYLVGMSYAQMIR----------DVP 149
           +   + EEY+  YP+S + +Y+             Y   ++Y   +           DV 
Sbjct: 86  R-VKILEEYLNDYPDSPHANYINGLLGSSYYFNEQYEYALAYFNSVDLDYLSNENREDVM 144

Query: 150 YDQRATKLMLQYMSRIVERY-----TNSPYVKGARFYVTVGRNQLAAKE----------- 193
           Y Q  + L +  ++  V  +     T++ Y K +++Y++  R      +           
Sbjct: 145 YRQATSYLKVDKLNDAVAWFETLRVTSTKYEKDSQYYISYIRYTQGKYDEALKGFLALQA 204

Query: 194 ---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
                      I   Y  +G Y  A    +  L+ Y + +++ E    L EA       D
Sbjct: 205 DEKYGELVPYYIASSYFIKGHYDKAQIVAEGYLSQYPNHKYSAEMYRILGEASFQYGQYD 264



 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 70/214 (32%), Gaps = 30/214 (14%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YEK   F+++QN S+A   F Q  + +P   ++RK+      + Y  G Y +A    +  
Sbjct: 624 YEKGRSFVQQQNNSEAIRSFQQLIQKYPENPISRKAAAEVGLLYYQDGNYNEAIKTYKWV 683

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           + +YP S                         R  K +   ++R+        Y   A  
Sbjct: 684 VQKYPGSDEARMAM------------------RDLKSLYVDLNRV------DEYATLAES 719

Query: 181 YVTVGRNQLAAKE----VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                R ++  ++    +   + YL RG    A   F+  L  Y     +  A   L   
Sbjct: 720 MPGGIRMEVTEQDSLTYIAAEKIYL-RGMNSEAKNSFERYLDKYPAGAFSLNAHYYLSVI 778

Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
                  ++     S +   YP   +      + 
Sbjct: 779 AGKQGQNEDVITHTSKL-LSYPDNPYYEEALIMR 811



 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 72/222 (32%), Gaps = 44/222 (19%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM----SAFVQYSAGK------- 109
           Y    +   ++NFS+A  +F         +   +          A      G        
Sbjct: 513 YNLGYIAFNQKNFSEAENWF---------SKYTQLETGDNREALADAFNRRGDCYLHSRA 563

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           + QA             +   DY  Y + +        V   Q+     +  +SR+   Y
Sbjct: 564 FIQAKGNYTR--ALNTSASVGDYSIYQMAL--------VAGLQKNYSEKINLLSRLANEY 613

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
             SPYV              A    E GR ++++     AI  FQ ++  Y +   + +A
Sbjct: 614 PESPYV--------------AQGWYEKGRSFVQQQNNSEAIRSFQQLIQKYPENPISRKA 659

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
            A +   Y      +EA +    + ++YP    AR     +K
Sbjct: 660 AAEVGLLYYQDGNYNEAIKTYKWVVQKYPGSDEARMAMRDLK 701



 Score = 39.7 bits (92), Expect = 0.40,   Method: Composition-based stats.
 Identities = 40/225 (17%), Positives = 71/225 (31%), Gaps = 35/225 (15%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
             V LD +++   +  +Y +A  +LK    + A  +F             + S    +++
Sbjct: 128 NSVDLDYLSNENREDVMYRQATSYLKVDKLNDAVAWFETLRVT--STKYEKDSQYYISYI 185

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           +Y+ GKY +A    + ++    + K  + V Y +  SY                      
Sbjct: 186 RYTQGKYDEAL---KGFLALQADEKYGELVPYYIASSYFIK--------GHYDKAQIVAE 234

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAK-------EVEIGRY--------------YLK 202
             + +Y N  Y       +     Q           E  +                 Y  
Sbjct: 235 GYLSQYPNHKYSAEMYRILGEASFQYGQYDRTISSLEQYVAAGNKLSRGSAYMLGMAYYN 294

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
            G Y  A+    LV+    D E  + A   L  +Y+ LA    AR
Sbjct: 295 TGVYSKAVRNLGLVVTEKQD-ELTQNAYLNLGLSYLQLADKTNAR 338



 Score = 38.9 bits (90), Expect = 0.77,   Method: Composition-based stats.
 Identities = 17/153 (11%), Positives = 37/153 (24%), Gaps = 25/153 (16%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           Y   + +     +SKA          +      + + + L              A    E
Sbjct: 286 YMLGMAYYNTGVYSKAVRNLGLVVTEKQD---ELTQNAYLNLGLSYLQLADKTNARMAFE 342

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           +  +   +    +   Y   +   +          A    +    R +  + +S Y    
Sbjct: 343 QASSMNADLAVKEQALYNYALCIHETSFS------AFGESVNVFERFLNEFPSSQYTDKV 396

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
             Y+                 Y+    Y AA+ 
Sbjct: 397 SDYLVEL--------------YMNTRSYDAALK 415



 Score = 35.9 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 71/237 (29%), Gaps = 54/237 (22%)

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
           +  + +A + F     D              A   +  G Y +A  + E Y++QYP  K 
Sbjct: 189 QGKYDEALKGFLALQAD---EKYGELVPYYIASSYFIKGHYDKAQIVAEGYLSQYPNHKY 245

Query: 130 VDYVY-----------------------------------YLVGMSYAQ------MIRDV 148
              +Y                                   Y++GM+Y         +R++
Sbjct: 246 SAEMYRILGEASFQYGQYDRTISSLEQYVAAGNKLSRGSAYMLGMAYYNTGVYSKAVRNL 305

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-----GRNQLAAKEVEIGRYYLKR 203
                  +  L   + +    +           +           LA KE  +  Y L  
Sbjct: 306 GLVVTEKQDELTQNAYLNLGLSYLQLADKTNARMAFEQASSMNADLAVKEQALYNYALCI 365

Query: 204 G-----EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
                  +  ++  F+  L  +  +++ ++    LVE Y+     D A + ++ I  
Sbjct: 366 HETSFSAFGESVNVFERFLNEFPSSQYTDKVSDYLVELYMNTRSYDAALKSIARIDR 422


>gi|220907898|ref|YP_002483209.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC
           7425]
 gi|219864509|gb|ACL44848.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425]
          Length = 689

 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 42/170 (24%), Positives = 63/170 (37%), Gaps = 33/170 (19%)

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           + LL  A+  Y AG+  +A+ L +  + Q+P   +   V    GM  AQ        Q  
Sbjct: 5   QKLLTQAYRHYQAGELAEASQLYQRVLQQHPGQLDALQVL---GMIAAQ--------QGD 53

Query: 155 TKLMLQYMSRIVERYT-------NSPYVKGA-----------RFYVTVGRNQLAAKEVEI 196
            +  + Y  + V+          N  Y   A           +  + + RN LAA    +
Sbjct: 54  VETAISYFRQAVQVAPAQADLHYNLGYALEAWGDGPAAIAAYQQALKLNRNHLAAC-YNL 112

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
           G  +L+RGEY  AIP FQ  +    D   A     +L  A         A
Sbjct: 113 GELHLQRGEYAGAIPCFQWAIQLQPDLSLAH---YKLGTALQQQGDPKAA 159


>gi|149916642|ref|ZP_01905144.1| lipoprotein, putative [Plesiocystis pacifica SIR-1]
 gi|149822359|gb|EDM81748.1| lipoprotein, putative [Plesiocystis pacifica SIR-1]
          Length = 323

 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 28/85 (32%), Gaps = 8/85 (9%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y  G+Y +A       +  +P     D   Y  G S          DQ      L+  + 
Sbjct: 214 YKDGRYAEAEKAFAAIVRAHPNDDYADNALYWQGESAY--------DQAHYADALKAFTA 265

Query: 165 IVERYTNSPYVKGARFYVTVGRNQL 189
           +VERY        A   + +   +L
Sbjct: 266 VVERYGGGNKAPDALLKIGLCYGRL 290



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/118 (13%), Positives = 36/118 (30%), Gaps = 8/118 (6%)

Query: 68  LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
            K+  +++A + F    R  P    A  +L       Y    Y  A       + +Y   
Sbjct: 214 YKDGRYAEAEKAFAAIVRAHPNDDYADNALYWQGESAYDQAHYADALKAFTAVVERYGGG 273

Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
                    +G+ Y ++                 +++++  Y  +   K A+  +   
Sbjct: 274 NKAPDALLKIGLCYGRL--------GDADNARDVLTQLIAAYPRAAASKIAKRKLADL 323



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 40/112 (35%), Gaps = 14/112 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              +  + IV  + N  Y   A ++                     +  Y  A+  F  V
Sbjct: 221 EAEKAFAAIVRAHPNDDYADNALYWQGESA--------------YDQAHYADALKAFTAV 266

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           +  Y     A +A+ ++   Y  L   D AR+V++ +   YP+   ++  + 
Sbjct: 267 VERYGGGNKAPDALLKIGLCYGRLGDADNARDVLTQLIAAYPRAAASKIAKR 318


>gi|254282190|ref|ZP_04957158.1| tetratricopeptide TPR_2 repeat protein [gamma proteobacterium
           NOR51-B]
 gi|219678393|gb|EED34742.1| tetratricopeptide TPR_2 repeat protein [gamma proteobacterium
           NOR51-B]
          Length = 304

 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 34/95 (35%), Gaps = 2/95 (2%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG- 108
            V     +   Y+ A   +K++ F+ A   F     D+PF   A  +      +      
Sbjct: 172 DVQATPAEEAAYQSAYELVKQRRFAPAVSAFKAFLGDYPFGRYAPNAHYWLGELYLVVDP 231

Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
            + + A    +  + QYP +  +    Y +G  + 
Sbjct: 232 AEPEMARQSFKLLLDQYPNNPKIPDALYKLGRVHY 266



 Score = 44.0 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 38/90 (42%), Gaps = 6/90 (6%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           A ++   SA+      ++  A S  + ++  YP  +     +Y +G  Y      +  D 
Sbjct: 178 AEEAAYQSAYELVKQRRFAPAVSAFKAFLGDYPFGRYAPNAHYWLGELY------LVVDP 231

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYV 182
              ++  Q    ++++Y N+P +  A + +
Sbjct: 232 AEPEMARQSFKLLLDQYPNNPKIPDALYKL 261



 Score = 40.5 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 32/108 (29%), Gaps = 16/108 (14%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYV--TVGRNQLAAKEVEIGRYYLKRGEYVAA 209
           QR     +      +  Y    Y   A +++         A  E+              A
Sbjct: 192 QRRFAPAVSAFKAFLGDYPFGRYAPNAHYWLGELYLVVDPAEPEM--------------A 237

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
              F+L+L  Y +     +A+ +L   +        ++E +      Y
Sbjct: 238 RQSFKLLLDQYPNNPKIPDALYKLGRVHYIKGNRQRSKEYLDRAIREY 285


>gi|157879370|pdb|1NA0|A Chain A, Design Of Stable Alpha-Helical Arrays From An Idealized
           Tpr Motif
 gi|157879371|pdb|1NA0|B Chain B, Design Of Stable Alpha-Helical Arrays From An Idealized
           Tpr Motif
          Length = 125

 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 42/117 (35%), Gaps = 14/117 (11%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y     + K+ ++ +A EY+ +     P      ++        Y  G Y +A    ++ 
Sbjct: 13  YNLGNAYYKQGDYDEAIEYYQKALELDPNNA---EAWYNLGNAYYKQGDYDEAIEYYQKA 69

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           +   P +      +Y +G +Y +        Q      ++Y  + +E   N+   K 
Sbjct: 70  LELDPNN---AEAWYNLGNAYYK--------QGDYDEAIEYYQKALELDPNNAEAKQ 115



 Score = 44.0 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 26/78 (33%), Gaps = 3/78 (3%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D       Y     + K+ ++ +A EY+ +     P      ++        Y  G Y +
Sbjct: 39  DPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNA---EAWYNLGNAYYKQGDYDE 95

Query: 113 AASLGEEYITQYPESKNV 130
           A    ++ +   P +   
Sbjct: 96  AIEYYQKALELDPNNAEA 113



 Score = 40.5 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 42/126 (33%), Gaps = 28/126 (22%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           + ++        Y  G Y +A    ++ +   P +      +Y +G +Y +        Q
Sbjct: 8   SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN---AEAWYNLGNAYYK--------Q 56

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
                 ++Y  + +E   N+                       +G  Y K+G+Y  AI  
Sbjct: 57  GDYDEAIEYYQKALELDPNNAEAW-----------------YNLGNAYYKQGDYDEAIEY 99

Query: 213 FQLVLA 218
           +Q  L 
Sbjct: 100 YQKALE 105


>gi|297183049|gb|ADI19194.1| hypothetical protein [uncultured delta proteobacterium
           HF0130_20J24]
          Length = 239

 Score = 52.0 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 51/119 (42%), Gaps = 12/119 (10%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ-YSAGKYQ-QAASLGEEY 120
           + ++ L+  N  +A E             +  K+ ++ A    + A  Y  Q+AS    +
Sbjct: 131 QGLISLQAGNPDQAVEDLQDILNHKKPTRL--KAEILLAVAHSFLAQGYAKQSASHYSTF 188

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           + +YP+S++     Y +G +  ++           K     ++ ++ +Y NSP+ K A+
Sbjct: 189 LREYPKSRHTPKALYYLGEAMMELGEQ--------KKQKVLLNELINKYPNSPFSKRAK 239



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/74 (16%), Positives = 33/74 (44%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           + +   +L +G    +   +   L  Y  + H  +A+  L EA + L    + + +++ +
Sbjct: 166 LAVAHSFLAQGYAKQSASHYSTFLREYPKSRHTPKALYYLGEAMMELGEQKKQKVLLNEL 225

Query: 254 QERYPQGYWARYVE 267
             +YP   +++  +
Sbjct: 226 INKYPNSPFSKRAK 239


>gi|330721822|gb|EGG99796.1| Glutathione peroxidase [gamma proteobacterium IMCC2047]
          Length = 282

 Score = 52.0 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 49/129 (37%), Gaps = 22/129 (17%)

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           AF      +Y +A++  E+ I  YP+S          G SY  +  +V   +   K  L 
Sbjct: 167 AFSLVRNKQYAEASAAFEQLIKDYPDSHYT-------GNSYYWL-GEVLLVESKQKQALD 218

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
               ++E+Y N      A+F                G+ YL+ G+        Q VL  Y
Sbjct: 219 AFESLLEKYPNHRKAPDAKFKQ--------------GKIYLQMGDKAQGKVILQDVLEQY 264

Query: 221 SDAEHAEEA 229
            D+  A+ A
Sbjct: 265 PDSSAAKLA 273



 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 46/126 (36%), Gaps = 8/126 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A   ++ + +++A   F Q  +D+P +     S      V     K +QA    E  
Sbjct: 164 YQVAFSLVRNKQYAEASAAFEQLIKDYPDSHYTGNSYYWLGEVLLVESKQKQALDAFESL 223

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           + +YP  +      +  G  Y QM                 +  ++E+Y +S   K A  
Sbjct: 224 LEKYPNHRKAPDAKFKQGKIYLQMGDKA--------QGKVILQDVLEQYPDSSAAKLAAA 275

Query: 181 YVTVGR 186
            +   +
Sbjct: 276 EIRDAK 281



 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 43/108 (39%), Gaps = 14/108 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                  ++++ Y +S Y   + +++      L            K+ +   A+  F+ +
Sbjct: 178 EASAAFEQLIKDYPDSHYTGNSYYWLGEV--LLVES---------KQKQ---ALDAFESL 223

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
           L  Y +   A +A  +  + Y+ +    + + ++  + E+YP    A+
Sbjct: 224 LEKYPNHRKAPDAKFKQGKIYLQMGDKAQGKVILQDVLEQYPDSSAAK 271


>gi|322421139|ref|YP_004200362.1| hypothetical protein GM18_3658 [Geobacter sp. M18]
 gi|320127526|gb|ADW15086.1| conserved repeat domain protein [Geobacter sp. M18]
          Length = 811

 Score = 52.0 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 12/74 (16%), Positives = 30/74 (40%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
               +++       +++++  A E  +   + +P   +   ++   A   Y  G  Q+A 
Sbjct: 34  SEDSQIFISGFNAYQKKDYKSAIESMSGLLKKYPDTPLKDMAIFWLARANYKVGNNQEAG 93

Query: 115 SLGEEYITQYPESK 128
               +++  YPES 
Sbjct: 94  KYMAQFLRDYPESP 107



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 25/61 (40%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            ++ +Y +AI     +L  Y D    + A+  L  A   +    EA + ++     YP+ 
Sbjct: 47  YQKKDYKSAIESMSGLLKKYPDTPLKDMAIFWLARANYKVGNNQEAGKYMAQFLRDYPES 106

Query: 261 Y 261
            
Sbjct: 107 P 107



 Score = 40.1 bits (93), Expect = 0.38,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 33/86 (38%), Gaps = 9/86 (10%)

Query: 89  FAGVARKSLL-MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
           F+  +  S + +S F  Y    Y+ A       + +YP++   D   + +  +  +    
Sbjct: 30  FSLDSEDSQIFISGFNAYQKKDYKSAIESMSGLLKKYPDTPLKDMAIFWLARANYK---- 85

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSP 173
                   +   +YM++ +  Y  SP
Sbjct: 86  ----VGNNQEAGKYMAQFLRDYPESP 107


>gi|309791088|ref|ZP_07685623.1| serine/threonine protein kinase with TPR repeats [Oscillochloris
           trichoides DG6]
 gi|308226872|gb|EFO80565.1| serine/threonine protein kinase with TPR repeats [Oscillochloris
           trichoides DG6]
          Length = 858

 Score = 52.0 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 16/155 (10%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY--EKAVLFLKEQNFSKAYEYF 80
           A+ + FS            SS +       D+     ++      L+    ++ +A   F
Sbjct: 562 AIAVTFSEDYSLTDNSVSLSSSEENYQQAIDLLPNVALFHTNMGYLYNNSADYEQARSAF 621

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
                  P    +  + L   +  Y   +  +A    +  ++  P + N  Y     G  
Sbjct: 622 ETALDIDP--NYSE-AQLGIGWGYYRQDQGTKADEAFDTALSMNPNNPNTHYA---KG-- 673

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
                  + +D    +  + Y  R  +    S Y 
Sbjct: 674 ------RIAFDNDEYRNAINYFERANQLNPRSTYT 702



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 56/217 (25%), Gaps = 74/217 (34%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA--------------------------- 93
           Y K  +      +  A  YF + ++  P +                              
Sbjct: 670 YAKGRIAFDNDEYRNAINYFERANQLNPRSTYTLAWLARAYQFEGFFADNDATRKDLYAK 729

Query: 94  -----RKSLLMS----AFV--------QYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
                R++ L      AF         QY   KY+++ S+ E  I   P     D  Y  
Sbjct: 730 AESIYRQA-LDIRPNFAFATSGLGWVLQYQ-EKYEESISIFERAIELNPND---DEAYNG 784

Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
           +G S   + R                 +  +   N    +           +L       
Sbjct: 785 LGWSLFNLDR--------LGDAETAFRQSTQLAPNYASPQYGLGRTLEELGRLDE----- 831

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
            R         AA   F+  L        AEEA+ RL
Sbjct: 832 AR---------AA---FKTTLEIDPTYTQAEEALKRL 856



 Score = 40.5 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 47/173 (27%), Gaps = 41/173 (23%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
            E+N+ +A +     +                 ++  ++  Y+QA S  E  +       
Sbjct: 583 SEENYQQAIDLLPNVALFHT----------NMGYLYNNSADYEQARSAFETALDI---DP 629

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           N       +G  Y +       DQ       +     +    N+P    A+  +      
Sbjct: 630 NYSEAQLGIGWGYYRQ------DQGT--KADEAFDTALSMNPNNPNTHYAKGRIA----- 676

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
                           EY  AI  F+        + +    +A L  AY    
Sbjct: 677 ------------FDNDEYRNAINYFERANQLNPRSTYT---LAWLARAYQFEG 714


>gi|148264213|ref|YP_001230919.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter uraniireducens Rf4]
 gi|146397713|gb|ABQ26346.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter uraniireducens Rf4]
          Length = 337

 Score = 52.0 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 14/127 (11%), Positives = 36/127 (28%), Gaps = 43/127 (33%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           +E+A     + N+  +   + Q    +P  G      +   +                  
Sbjct: 63  FEEANNSFSQGNYKASLNKYEQIIEKYPTTGDRVLFEMGIIYA----------------- 105

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
              +P+++  DY                       +  L+   ++++ Y  S Y + +  
Sbjct: 106 ---HPKNEQKDY-----------------------QKSLECFQKLIKDYPGSGYRQDSER 139

Query: 181 YVTVGRN 187
            +    N
Sbjct: 140 MIFYINN 146



 Score = 40.5 bits (94), Expect = 0.24,   Method: Composition-based stats.
 Identities = 9/76 (11%), Positives = 30/76 (39%), Gaps = 10/76 (13%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ------ 254
             +G Y A++ +++ ++  Y      +  +  +   Y      +E ++    ++      
Sbjct: 70  FSQGNYKASLNKYEQIIEKYPTTG--DRVLFEMGIIYAH--PKNEQKDYQKSLECFQKLI 125

Query: 255 ERYPQGYWARYVETLV 270
           + YP   + +  E ++
Sbjct: 126 KDYPGSGYRQDSERMI 141


>gi|146094076|ref|XP_001467149.1| hypothetical protein [Leishmania infantum JPCM5]
 gi|134071513|emb|CAM70202.1| conserved hypothetical protein [Leishmania infantum JPCM5]
          Length = 847

 Score = 52.0 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 26/209 (12%), Positives = 56/209 (26%), Gaps = 40/209 (19%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           + ++ +A    K +N+++A E +          PF                  G++ +A 
Sbjct: 444 KALFNRAFCEDKLKNYTRAIEDYTAALDLDPRNPFTHY------NLGISYDHKGRHARAM 497

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
                 I       +           +          Q A    +   +  +        
Sbjct: 498 QAFTRAIELDDRHPD-----------FFHNRGFTQRKQGAYAAAIADYTTAISLDPKH-- 544

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRY-------------YLKRGEYVAAIPRFQLVLANY- 220
              + +      ++L   E  +  Y             Y  RG  +A + R +  + N+ 
Sbjct: 545 -FKSHYNRAYCFSKLGRYEEAVADYAAALQIDSGNANAYHNRGAALAKLGRLEAAVENFN 603

Query: 221 ---SDAEHAEEAMARLVEAYVALALMDEA 246
                +     A+      Y  L   D+A
Sbjct: 604 CALRLSPKLTFALNARGLVYDQLQQYDKA 632


>gi|189423651|ref|YP_001950828.1| hypothetical protein Glov_0581 [Geobacter lovleyi SZ]
 gi|189419910|gb|ACD94308.1| conserved repeat domain protein [Geobacter lovleyi SZ]
          Length = 880

 Score = 52.0 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 24/61 (39%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            ++ EY AA+ R   VL  Y +    +  +  L  A+  +    +A   ++     YP  
Sbjct: 44  YQQKEYPAAVARLGEVLKKYPETPLRDMTLFWLARAHYKVGNRSDAARYMAQFTREYPDN 103

Query: 261 Y 261
            
Sbjct: 104 P 104



 Score = 49.3 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/105 (13%), Positives = 34/105 (32%), Gaps = 8/105 (7%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           LT F +  +   +              V       +++       +++ +  A     + 
Sbjct: 8   LTAFLTCLLIATLLCAAT--------VVAQETEDSQLFLSGFNAYQQKEYPAAVARLGEV 59

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
            + +P   +   +L   A   Y  G    AA    ++  +YP++ 
Sbjct: 60  LKKYPETPLRDMTLFWLARAHYKVGNRSDAARYMAQFTREYPDNP 104



 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 36/102 (35%), Gaps = 12/102 (11%)

Query: 93  ARKSLL-MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
              S L +S F  Y   +Y  A +   E + +YPE+   D   + +  ++ ++       
Sbjct: 31  TEDSQLFLSGFNAYQQKEYPAAVARLGEVLKKYPETPLRDMTLFWLARAHYKVGNRSD-- 88

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
                   +YM++    Y ++P        +       A  E
Sbjct: 89  ------AARYMAQFTREYPDNPLKNTVEDELLALA---AQHE 121


>gi|225166241|ref|ZP_03727945.1| tetratricopeptide TPR_2 repeat protein [Opitutaceae bacterium TAV2]
 gi|224799519|gb|EEG18044.1| tetratricopeptide TPR_2 repeat protein [Opitutaceae bacterium TAV2]
          Length = 218

 Score = 52.0 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 21/57 (36%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
           +N  K  E   +     P++  A  +L+  A      G    A    +  I  YP++
Sbjct: 160 KNRGKGVEQLEKILVSAPYSEYAPLALMSIARGHSLMGDPDGAIDALDRMINNYPQN 216



 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 70/195 (35%), Gaps = 23/195 (11%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
            GW+ +        S T+ R   E+  KA    +  + S A + + Q ++ +  +  A +
Sbjct: 36  AGWQVEGGALAPYFSSTEGRNALELMNKARADEEAGHESSAIKGYLQVTKSYGTSIYAPE 95

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPE----SKNVDYVYYLV--GMSYAQMIRDVP 149
           +L     +     K+ +A    +E ++++P     ++ +    Y +  G+      R + 
Sbjct: 96  ALFRLGGLYNKERKFTKAFDAYQEIVSKHPNYAKFNETIG-AQYRIATGLVDGARGRILG 154

Query: 150 YDQ--RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
                +     ++ + +I+     S Y   A               + I R +   G+  
Sbjct: 155 VFPGFKNRGKGVEQLEKILVSAPYSEYAPLAL--------------MSIARGHSLMGDPD 200

Query: 208 AAIPRFQLVLANYSD 222
            AI     ++ NY  
Sbjct: 201 GAIDALDRMINNYPQ 215


>gi|327269026|ref|XP_003219296.1| PREDICTED: intraflagellar transport protein 88 homolog [Anolis
           carolinensis]
          Length = 820

 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 38/272 (13%), Positives = 87/272 (31%), Gaps = 40/272 (14%)

Query: 8   AICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLF 67
            + +FE    ++   A T    +   FL     Q+S    L   TD      +  K    
Sbjct: 438 TLKMFEKKDSRVKSAAATNLSFLY--FLENEVTQASTYSDLAVNTDRYNPAALTNKGNTI 495

Query: 68  LKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
               ++ KA E++      D   +     +L           +  +A    + ++  +  
Sbjct: 496 FVNGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTLKKLNRLDEAL---DSFLKLHAI 548

Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
            +N   V + +  S  +++ D           ++++ +++       +   A   +    
Sbjct: 549 LRNSAQVLFQIA-SIYELMEDPN-------QAIEWLMQLISVVPTDSH---ALAKLGELY 597

Query: 187 NQLAAKEVEIGRYYLKRGEYVAA-IPRFQLVLANYSDAEHAEEAMARLVEA--------- 236
           +    K  +  +YY +   Y  + I   + + A Y D +  E+A+     A         
Sbjct: 598 DNEGDKS-QAFQYYFESYRYFPSNIEVIEWLGAYYIDTQFCEKAIHYFERAALIQPTQVK 656

Query: 237 --------YVALALMDEAREVVSLIQERYPQG 260
                   Y       +A +   +I  ++P  
Sbjct: 657 WQLMVASCYRRSGNYQKALDTYKMIHRKFPDN 688


>gi|317484568|ref|ZP_07943474.1| tol-pal system protein YbgF [Bilophila wadsworthia 3_1_6]
 gi|316924167|gb|EFV45347.1| tol-pal system protein YbgF [Bilophila wadsworthia 3_1_6]
          Length = 139

 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 45/127 (35%), Gaps = 8/127 (6%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
            + +Y+  V     +N+ +A + F+  +  +    +   +        Y  G +  AA  
Sbjct: 17  AKALYDNGVQSFNARNYKQALKSFSDFTDTYGKHKLVSNAWFWRGECNYQLGNFPAAALD 76

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            E+ I++Y  S      Y   GM + +  +               +  +++++  SP   
Sbjct: 77  YEQVISKYGSSGKAASAYLKQGMCFIKAGKK--------DAAKVRLQELIKKFPKSPEAT 128

Query: 177 GARFYVT 183
            A   + 
Sbjct: 129 RATQLMK 135



 Score = 44.3 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 48/141 (34%), Gaps = 22/141 (15%)

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           K+L  +    ++A  Y+QA     ++   Y + K V   ++  G    Q+          
Sbjct: 18  KALYDNGVQSFNARNYKQALKSFSDFTDTYGKHKLVSNAWFWRGECNYQLGNFP------ 71

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
                    +++ +Y +S     A     +               ++K G+  AA  R Q
Sbjct: 72  --AAALDYEQVISKYGSSGKAASAYLKQGMC--------------FIKAGKKDAAKVRLQ 115

Query: 215 LVLANYSDAEHAEEAMARLVE 235
            ++  +  +  A  A   + +
Sbjct: 116 ELIKKFPKSPEATRATQLMKD 136



 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 48/143 (33%), Gaps = 22/143 (15%)

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++    Y  G+             R  K  L+  S   + Y     V  A F+      Q
Sbjct: 15  DIAKALYDNGVQSFNA--------RNYKQALKSFSDFTDTYGKHKLVSNAWFWRGECNYQ 66

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           L              G + AA   ++ V++ Y  +  A  A  +    ++     D A+ 
Sbjct: 67  L--------------GNFPAAALDYEQVISKYGSSGKAASAYLKQGMCFIKAGKKDAAKV 112

Query: 249 VVSLIQERYPQGYWARYVETLVK 271
            +  + +++P+   A     L+K
Sbjct: 113 RLQELIKKFPKSPEATRATQLMK 135


>gi|332709548|ref|ZP_08429509.1| murein transglycosylase family protein [Lyngbya majuscula 3L]
 gi|332351807|gb|EGJ31386.1| murein transglycosylase family protein [Lyngbya majuscula 3L]
          Length = 731

 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 39/264 (14%), Positives = 83/264 (31%), Gaps = 58/264 (21%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           D +          R  Y  A   +++    +A ++      D+P   +A    L  A   
Sbjct: 75  DAFASGPKSREQYRARYLLASDLIQQNQPEQALKHLEGLESDYP--VLASHVALKRAQAY 132

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD-VPYDQRATKLMLQYMS 163
            + G  + A  + +  + +YP         Y +G S  +   D +       + +     
Sbjct: 133 QAMGDRESATGVWQTILKKYPNQAVAAEALYHLGKSNPKHWDDAIAKFPSHPRTLEIVRQ 192

Query: 164 RIVERYTN--------SPYVKGARFYVTVGRNQLAAK----------EVEIGRYYLKRGE 205
           R+     N        + +   A   +   R+++  K          E+ IG  Y +  +
Sbjct: 193 RLKNN-PNQLPLLLILAKHTPKA-LGMQEIRDRIVDKYPEQLTPEDWEM-IGTGYWETWK 249

Query: 206 YVAA----------------IPR--------------FQLVLANYSDAEHAEEAMARLVE 235
           Y  A                  R              ++ +++ Y +A+    A+ RL  
Sbjct: 250 YGKAGKAYAQAPRTPRNLYRAGRGLHLDTKASKGKIFYEQLISAYPNAKETGLALRRLA- 308

Query: 236 AYVALALMDEAREVVSLIQERYPQ 259
              +++   EA   +  + + YP 
Sbjct: 309 ---SISKRTEALAYLDQVIQNYPD 329



 Score = 35.9 bits (82), Expect = 6.5,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 68/209 (32%), Gaps = 28/209 (13%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           R  R +Y        +   SK   ++ Q    +P A     +L   A    S  K  +A 
Sbjct: 262 RTPRNLYRAGRGLHLDTKASKGKIFYEQLISAYPNAKETGLALRRLA----SISKRTEAL 317

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
           +  ++ I  YP+                ++   V           Q    ++ +Y +S  
Sbjct: 318 AYLDQVIQNYPD--EAPQALLDKAKILEKLNSKVS--------AGQARKSVLTQYGSSD- 366

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
              A +   + + + A             G+   A    Q +     D++ A +A   + 
Sbjct: 367 -AAANYRWQMAQKKAAK------------GKLQEAWQWAQPITTKNPDSDIAAQAGFWVG 413

Query: 235 EAYVALALMDEAREVVSLIQERYPQGYWA 263
                L   ++A+     +  RYP+ Y+A
Sbjct: 414 RWASQLGRPNDAKAAFEHVIARYPESYYA 442


>gi|328701581|ref|XP_003241648.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog isoform 2
           [Acyrthosiphon pisum]
          Length = 975

 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 43/276 (15%), Positives = 104/276 (37%), Gaps = 37/276 (13%)

Query: 1   MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
           +   L  +  + EA        A+T  F++A  F    + Q +   Y D + +     + 
Sbjct: 271 LEESLSLSKKMVEADPQYYNSIAVTTTFNLARIFEAQCQFQKAETFYKDILKEHPNYIDC 330

Query: 61  YEK-AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           Y +   +        +A ++F +      + P    +    L  A +++  G+       
Sbjct: 331 YLRLGCMARDRNQIYEASDWFKEALRIDNEHP-DAWSLLGNLHLAKMEWGPGQ------- 382

Query: 117 GEEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPYDQ----RATKLMLQYMSRIVERYT 170
            +++      P + N  Y    +G  + Q +     ++    R   L LQ+ +++++   
Sbjct: 383 -KKFERVLKNPSTLNDSYSLIALGNVWLQTLHQPTRNKEQEKRHQDLALQFFTKVLKNDP 441

Query: 171 NSPYVKGA-------RFYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRF 213
            + +           + Y+   R+  A  +E         + I   Y+++ +Y++AI  +
Sbjct: 442 KNIWAANGIGCVMAHKQYINEARDIFAQVREATADFCDVWLNIAHIYIEQKQYISAIQMY 501

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           +  +  +   ++  E +  L  AY     + EA++V
Sbjct: 502 ENCIKKFFKHDNV-EILQYLGRAYFKAGKLKEAKKV 536


>gi|226953080|ref|ZP_03823544.1| tol-pal system protein YbgF [Acinetobacter sp. ATCC 27244]
 gi|294650669|ref|ZP_06728023.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
           19194]
 gi|226836172|gb|EEH68555.1| tol-pal system protein YbgF [Acinetobacter sp. ATCC 27244]
 gi|292823460|gb|EFF82309.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
           19194]
          Length = 269

 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 47/120 (39%), Gaps = 17/120 (14%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG--EYVAA 209
           Q   K  +Q M   ++ + N  Y+  A F++                +YL      Y AA
Sbjct: 163 QGGAKQAIQPMQNFIKNHPNGIYIGNAYFWL--------------AEFYLAVEPVNYTAA 208

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVE-AYVALALMDEAREVVSLIQERYPQGYWARYVET 268
              +  V+  Y ++  A  A+ +L   A        +A +  + +  +YPQ   A++++ 
Sbjct: 209 KQNYTTVVNQYPNSARASRALYQLYSIAKEVDKNTAQANQYRTKLLAQYPQSEEAKFIQK 268



 Score = 40.9 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 45/138 (32%), Gaps = 23/138 (16%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
            +  ++  Y  A+   K+    +A +      ++ P                +   ++  
Sbjct: 146 QIELEKAAYTVALDAYKQGGAKQAIQPMQNFIKNHPNGIY-------IGNAYFWLAEFYL 198

Query: 113 AA------SLGEEY---ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           A       +  + Y   + QYP S       Y +      + ++V    + T    QY +
Sbjct: 199 AVEPVNYTAAKQNYTTVVNQYPNSARASRALYQL----YSIAKEVD---KNTAQANQYRT 251

Query: 164 RIVERYTNSPYVKGARFY 181
           +++ +Y  S   K  +  
Sbjct: 252 KLLAQYPQSEEAKFIQKK 269



 Score = 35.5 bits (81), Expect = 7.8,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 48/145 (33%), Gaps = 31/145 (21%)

Query: 95  KSLLMSAFVQ------YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
           +  L  A         Y  G  +QA    + +I  +P    +   Y+ +   +   +  V
Sbjct: 146 QIELEKA-AYTVALDAYKQGGAKQAIQPMQNFIKNHPNGIYIGNAYFWLA-EFYLAVEPV 203

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
            Y         Q  + +V +Y NS     A + +             I +   +  +  A
Sbjct: 204 NY-----TAAKQNYTTVVNQYPNSARASRALYQL-----------YSIAK---EVDKNTA 244

Query: 209 AIPRFQL-VLANYSDAEHAEEAMAR 232
              +++  +LA Y  +   EEA   
Sbjct: 245 QANQYRTKLLAQYPQS---EEAKFI 266


>gi|254509854|ref|ZP_05121921.1| tetratricopeptide TPR_2 [Rhodobacteraceae bacterium KLH11]
 gi|221533565|gb|EEE36553.1| tetratricopeptide TPR_2 [Rhodobacteraceae bacterium KLH11]
          Length = 276

 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 20/150 (13%), Positives = 49/150 (32%), Gaps = 14/150 (9%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
               S+   +D       ++  ++ A   L + +F  A   F Q  + +P + +A ++ L
Sbjct: 135 SPTPSQPAAIDQGELAIGEQADFDAASQALADGDFQSAANLFAQFDQSYPGSPLASEANL 194

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPES---KNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
                    G  ++AA     ++  +             + +G +  ++          T
Sbjct: 195 RRGQALEGLGDTREAARA---FLASFTGDSEGPMAPEALFELGSALGRL--------GQT 243

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
                 +  +  R+ +SP    A   +   
Sbjct: 244 DQACITLGEVGVRFPSSPLAGSATQEMASL 273



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 32/112 (28%), Gaps = 20/112 (17%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              +      ++  + Y  SP    A          L             R         
Sbjct: 167 GDFQSAANLFAQFDQSYPGSPLASEANLRRGQALEGLGD----------TREA------- 209

Query: 213 FQLVLANY---SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            +  LA++   S+   A EA+  L  A   L   D+A   +  +  R+P   
Sbjct: 210 ARAFLASFTGDSEGPMAPEALFELGSALGRLGQTDQACITLGEVGVRFPSSP 261


>gi|242018035|ref|XP_002429488.1| tpr repeat nuclear phosphoprotein, putative [Pediculus humanus
           corporis]
 gi|212514426|gb|EEB16750.1| tpr repeat nuclear phosphoprotein, putative [Pediculus humanus
           corporis]
          Length = 1217

 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 38/265 (14%), Positives = 80/265 (30%), Gaps = 52/265 (19%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF------- 89
              R  +         +       Y  A L      + +A + +    R+ P        
Sbjct: 482 SLARAKTESEIDPQYYNSISVTTTYNLARLNESLCQYDRAEKLYKDILREHPNYVDCYLR 541

Query: 90  -AGVAR-KSLLMSA-----FVQYSAGKYQQAASLG--------------EEYITQYPESK 128
              +AR K  +  A             +  A SL               +++      S 
Sbjct: 542 LGCMARDKGQISEASDWFKDALQINNDHPDAWSLLGNLHLAQMEWGPGQKKFERILKNSS 601

Query: 129 NVDYVYYLVGM------SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA---- 178
                Y L+ +      +  Q  RD   ++R  +  L    +++     + +        
Sbjct: 602 TSSDAYSLIALGNVWLQTLHQPTRDKEREKRHQERALAMYKQVLRNDPRNIWAANGIGAV 661

Query: 179 ---RFYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
              +  +   R+  A  +E         + I   Y+++ +Y++AI  ++  L  +    H
Sbjct: 662 LAHKGAINEARDVFAQVREATADFCDVWLNIAHIYVEQKQYISAIQMYENCLRKFYKYPH 721

Query: 226 AEEAMARLVEAYVALALMDEAREVV 250
             E +  L  AY     + EA+  +
Sbjct: 722 V-EVLQYLARAYFKAGKLKEAKMTL 745


>gi|115375328|ref|ZP_01462592.1| tetratricopeptide repeat domain protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|115367701|gb|EAU66672.1| tetratricopeptide repeat domain protein [Stigmatella aurantiaca
           DW4/3-1]
          Length = 448

 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 13/113 (11%), Positives = 34/113 (30%), Gaps = 22/113 (19%)

Query: 30  IAVCFLVGWERQSSRDVYLDSVTDVRYQ-------------------REVYEKAVLFLKE 70
           + +  L G     S           R++                    E++         
Sbjct: 80  VGLLGLAGCRTTGSGARQETPAPATRHEVEFEPVTVTGDLELERLNDEELFAGGTSAFAA 139

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           ++F +A  YF + +   P +   R++L  +        ++++A    + +   
Sbjct: 140 EDFKQAARYFGRLADFHPQSSHRRQALYNAGLAHQRLKEWEEA---YQRFSEL 189



 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 35/102 (34%), Gaps = 14/102 (13%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K   +Y  R+ + +  S + + A +   +   +L               E+  A  R
Sbjct: 140 EDFKQAARYFGRLADFHPQSSHRRQALYNAGLAHQRL--------------KEWEEAYQR 185

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
           F  +    +    A +A  RL E    L   +EA   + ++ 
Sbjct: 186 FSELADAAAGQGEALDAAFRLAETQYHLERFEEAAAQLRVLA 227


>gi|254465845|ref|ZP_05079256.1| adenylyl cyclase class-3/4/guanylyl cyclase [Rhodobacterales
           bacterium Y4I]
 gi|206686753|gb|EDZ47235.1| adenylyl cyclase class-3/4/guanylyl cyclase [Rhodobacterales
           bacterium Y4I]
          Length = 589

 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 76/241 (31%), Gaps = 64/241 (26%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKA---YEYFNQCSRDFPFAG-----------VARKS-L 97
           D R  + +YE+A+   ++Q++++A             + +A             A+++  
Sbjct: 365 DNREAQTLYERALS--RDQDYARASAAISRTLNIDWRYSWAKDAEHALDTALSYAQRAVE 422

Query: 98  LM---------SAFVQYSAGKYQQAASLGEEYITQYPESKNV--DYVYYLVGMSYAQMIR 146
           L            FV     ++  A       +   P   ++  DY      +++     
Sbjct: 423 LDPTDARGFGELGFVHLYRKEHDAAIGAYRRALALNPNDADLLSDYA---DALAH----- 474

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
               D +A    LQ   R+   + +                        +G  Y    +Y
Sbjct: 475 --SGDNQAAIGNLQQAMRLNPYFPD-------------------QYLWHLGGAYYNLKQY 513

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
            A I     +  N        E    L  +Y  L  +D+AR + +  +E +P     R+ 
Sbjct: 514 DAVIDTLTKM--NNPT-----EGQRMLAASYAQLGDIDQARTMAARHREAHPNFSLDRWA 566

Query: 267 E 267
           +
Sbjct: 567 K 567


>gi|149202854|ref|ZP_01879825.1| hypothetical protein RTM1035_18966 [Roseovarius sp. TM1035]
 gi|149143400|gb|EDM31436.1| hypothetical protein RTM1035_18966 [Roseovarius sp. TM1035]
          Length = 280

 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 54/135 (40%), Gaps = 10/135 (7%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D+      +R+ +++A   L+  N S+A   F      +P + ++ ++ L+      +AG
Sbjct: 149 DNPQLAIGERDDFDRAEAALQAGNNSEAAAGFAAFLSTYPGSPLSGRAGLLRGEALEAAG 208

Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            + + A +  + +    P+        + +G +  ++          T+     + ++  
Sbjct: 209 QQSEAARAYLDSFSAA-PDGSEAPEALFRLGRALGRL--------GQTQEACVTLGQVEA 259

Query: 168 RYTNSPYVKGARFYV 182
           RY  +  V  A+  +
Sbjct: 260 RYPTAAAVSSAQSEM 274



 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 37/118 (31%), Gaps = 19/118 (16%)

Query: 146 RDVPYDQRATK-----LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
            D    + A +           +  +  Y  SP    A           A ++ E  R Y
Sbjct: 159 DDFDRAEAALQAGNNSEAAAGFAAFLSTYPGSPLSGRAGLLRGEALEA-AGQQSEAARAY 217

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           L    + AA            D   A EA+ RL  A   L    EA   +  ++ RYP
Sbjct: 218 L--DSFSAA-----------PDGSEAPEALFRLGRALGRLGQTQEACVTLGQVEARYP 262


>gi|254412567|ref|ZP_05026341.1| Transglycosylase SLT domain protein [Microcoleus chthonoplastes PCC
           7420]
 gi|196180877|gb|EDX75867.1| Transglycosylase SLT domain protein [Microcoleus chthonoplastes PCC
           7420]
          Length = 730

 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 72/250 (28%), Gaps = 36/250 (14%)

Query: 35  LVGWERQSSRDVYLDSVTDVRYQREV---YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
           LV    Q+  +  +D  +  +   +    Y  A   + +Q    A ++       +P   
Sbjct: 62  LVSLSPQARAEQLMDIASGRQSLDQYRARYLLASDLIGQQQPEAALQWLEGLDAKYP--Q 119

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY----AQMIRD 147
           +A    L  A    + G    A    +  +  YP      +  Y +G S      Q I  
Sbjct: 120 LASHIALKRAQAYTAMGDTANAEQAWQGILETYPSDPVAAHALYALGESNPEYWQQAIAQ 179

Query: 148 VPYDQRATKLMLQYMSR------IVERYTNSPYVKGARFYVTVGRNQLAAKEVE------ 195
            P   R   ++ Q +        ++     S Y           R++L   E        
Sbjct: 180 FPTHPRTLDIVRQKLQENPKQLNLLLHLAKSAYDTPGS---GGIRDRLV-NEYASGLQPQ 235

Query: 196 ----IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
               I   Y +  EY  A          Y+ A    E   R+   Y       EA+    
Sbjct: 236 DWQTIAFGYWETREYDKAA-------KAYTKAPPTPENAYRVGRGYHLKGKRQEAKAGYQ 288

Query: 252 LIQERYPQGY 261
            +   +P   
Sbjct: 289 QLIRTFPDAK 298



 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 51/169 (30%), Gaps = 35/169 (20%)

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
            AF  +   +Y +A    + Y    P  +N     Y VG  Y    +         +   
Sbjct: 240 IAFGYWETREYDKA---AKAYTKAPPTPENA----YRVGRGYHLKGKR--------QEAK 284

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
               +++  + +    K     +    + L ++E               AIP    V+A 
Sbjct: 285 AGYQQLIRTFPD---AKETGLGLRRLASLLPSQE---------------AIPYLDQVVAK 326

Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           + D   A EA+        AL     A +    +  +YP    A     
Sbjct: 327 FPD--EAPEALLTKANILEALGSSQSATQARQSVLTQYPNSDAAADYRW 373



 Score = 40.5 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 39/268 (14%), Positives = 89/268 (33%), Gaps = 40/268 (14%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L +   +A            RD  ++        ++    A  + + + + KA + + + 
Sbjct: 201 LNLLLHLAKSAYDTPGSGGIRDRLVNEYASGLQPQDWQTIAFGYWETREYDKAAKAYTKA 260

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
               P    A +         +  GK Q+A +  ++ I  +P++K         G+   +
Sbjct: 261 P---PTPENAYRV----GRGYHLKGKRQEAKAGYQQLIRTFPDAKET-------GLGLRR 306

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTN------------------SPYVKGARFYVTVG 185
           +   +P     ++  + Y+ ++V ++ +                  S     AR  V   
Sbjct: 307 LASLLP-----SQEAIPYLDQVVAKFPDEAPEALLTKANILEALGSSQSATQARQSVLTQ 361

Query: 186 R---NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
               +  A    ++     + G    A    Q +  +  D+  A EA   +    + L  
Sbjct: 362 YPNSDAAADYRWQVANQKAQAGNLAEAWQWAQPITTDSPDSAIAPEAAFWVGRWAMQLGR 421

Query: 243 MDEAREVVSLIQERYPQGYWARYVETLV 270
            +EA      +  +YP+ Y+A      +
Sbjct: 422 QEEATSAFEHVLAQYPESYYAWRSARFL 449


>gi|222053244|ref|YP_002535606.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. FRC-32]
 gi|221562533|gb|ACM18505.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. FRC-32]
          Length = 323

 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 20/158 (12%), Positives = 44/158 (27%), Gaps = 53/158 (33%)

Query: 30  IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
           + +  + G    S  + Y    T        +E+A     + ++  A   + Q    +P 
Sbjct: 21  VIMALICGCSHFS--EEYKARPT--------FEEANKLFSQGSYHTALTKYKQIKEQYPT 70

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
             +  + L                       I  +P+++  DY                 
Sbjct: 71  --MGDRVLFEMGV------------------IHGHPQNEQKDY----------------- 93

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
                 +  L+   ++V  Y  S Y + +   +    N
Sbjct: 94  ------EKALECFQKLVRDYPGSGYRQDSEMMMFYINN 125


>gi|320106859|ref|YP_004182449.1| transcriptional regulator CadC [Terriglobus saanensis SP1PR4]
 gi|319925380|gb|ADV82455.1| transcriptional regulator, CadC [Terriglobus saanensis SP1PR4]
          Length = 713

 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 70/223 (31%), Gaps = 35/223 (15%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
            + + +     +A   F+      P F      +++    V + AG+Y++A      YI 
Sbjct: 492 GMTYQQAGKLYQAIAEFSAALSLDPEFEP----AIVHMGDVYFQAGRYEEAIQQYRRYIG 547

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY--VKGARF 180
                 +       +G      I  V   Q+  K   +   R +    ++ +  +  A  
Sbjct: 548 A--AHTDAARA---IG---YGNIAAVYRQQQNLKEAAKAAEREIHYDPHAIWNSLVIAVD 599

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGE------------YVA--------AIPRFQLVLANY 220
                +       ++  R   +RG             ++A        AI  FQ  L + 
Sbjct: 600 EKHAAKVHHYEVALQSARNSQERGTPGDRRTIAYQRGWLALQRGDRSKAIASFQEALQHI 659

Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
                 +   + L +A++ L +  +A      +    P   +A
Sbjct: 660 PATSGIDLHDSCLADAFMQLGMQQKAETEYRRLLANNPSDPFA 702



 Score = 39.7 bits (92), Expect = 0.47,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 69/243 (28%), Gaps = 67/243 (27%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA-------RKSL--LMSAFVQY 105
             ++ +Y  A     E+N+ +A   +   ++  P    A       ++SL  L +A    
Sbjct: 381 TEKQRLYIAAWRATAEENYDEAARIYATITQRCPHDPEAFRQLAKLQRSLEHLDAANATL 440

Query: 106 SAG----------------------KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
            +G                       Y  A    +EY+   P   N    +  +GM+Y Q
Sbjct: 441 QSGLTANPNASSLFNVKAIVELAQYHYSAAIVSAQEYLRLSPNEPN---AHDTLGMTYQQ 497

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
                          +   S  +                           V +G  Y + 
Sbjct: 498 A--------GKLYQAIAEFSAALSLDPEFEPAI-----------------VHMGDVYFQA 532

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMAR----LVEAYVALALMDEAREVVSLIQERYPQ 259
           G Y  AI +++     Y  A H + A A     +   Y     + EA +         P 
Sbjct: 533 GRYEEAIQQYR----RYIGAAHTDAARAIGYGNIAAVYRQQQNLKEAAKAAEREIHYDPH 588

Query: 260 GYW 262
             W
Sbjct: 589 AIW 591


>gi|283956471|ref|ZP_06373951.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni 1336]
 gi|283792191|gb|EFC30980.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni 1336]
          Length = 215

 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 70/179 (39%), Gaps = 18/179 (10%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L +F S+   F      ++   +Y  S ++       Y++ +  L++++  KA +++N  
Sbjct: 7   LLVFLSV---FFNACSTKNDEGLYNLSASEW------YKQIIKDLQDKDLEKADDHYNGM 57

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
           + +     +   +L++ A       +Y+ A    +EY  ++  S+N DY+ YL   +   
Sbjct: 58  ASEHIADPLLETTLIILAQAHMDEEEYKLAEFYLDEYNKKFGNSRNADYIRYLKIKAKFD 117

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
                  +Q       + +   ++ Y  + Y    +  +T            +  +YL 
Sbjct: 118 AFAVPNRNQALMLESQKEIDTFLKDYPYTEYEPLVQTMLTK---------FNLAVFYLN 167


>gi|89094845|ref|ZP_01167778.1| hypothetical protein MED92_08787 [Oceanospirillum sp. MED92]
 gi|89080900|gb|EAR60139.1| hypothetical protein MED92_08787 [Oceanospirillum sp. MED92]
          Length = 264

 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 56/159 (35%), Gaps = 22/159 (13%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
           S++                +          + Y +A   ++E+N+ KA E F    +D+P
Sbjct: 116 SVSASAAQPSTGFQPPKPEMVQPDAAPSDAKAYREAFGLVRERNYPKAIEAFTNFIKDYP 175

Query: 89  FAGVARKSLLMSAFVQYSAGK-------YQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
            +          A   Y  G+        + A     + IT + + +      Y +G+ Y
Sbjct: 176 QSA-------RLANAHYWLGEIYLAEQKPELARESFVQVITNFADHRKAPDAAYKLGIVY 228

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
            Q+              ++Y+  ++ +Y +S  V+ A+ 
Sbjct: 229 DQLGDKA--------KSVEYLDMVINKYPDSSAVRLAKE 259



 Score = 51.7 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 39/105 (37%), Gaps = 14/105 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             ++  +  ++ Y  S               +LA     +G  YL   +   A   F  V
Sbjct: 162 KAIEAFTNFIKDYPQSA--------------RLANAHYWLGEIYLAEQKPELARESFVQV 207

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           + N++D   A +A  +L   Y  L    ++ E + ++  +YP   
Sbjct: 208 ITNFADHRKAPDAAYKLGIVYDQLGDKAKSVEYLDMVINKYPDSS 252



 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 44/124 (35%), Gaps = 22/124 (17%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               Y +A      +I  YP+S  +   +Y +G  Y          ++  +L  +   ++
Sbjct: 156 RERNYPKAIEAFTNFIKDYPQSARLANAHYWLGEIYLA--------EQKPELARESFVQV 207

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           +  + +      A + + +  +QL  K   +        EY+       +V+  Y D+  
Sbjct: 208 ITNFADHRKAPDAAYKLGIVYDQLGDKAKSV--------EYL------DMVINKYPDSSA 253

Query: 226 AEEA 229
              A
Sbjct: 254 VRLA 257



 Score = 36.2 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 22/65 (33%)

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +   Y  AI  F   + +Y  +     A   L E Y+A    + ARE    +   +    
Sbjct: 156 RERNYPKAIEAFTNFIKDYPQSARLANAHYWLGEIYLAEQKPELARESFVQVITNFADHR 215

Query: 262 WARYV 266
            A   
Sbjct: 216 KAPDA 220


>gi|183220546|ref|YP_001838542.1| putative cAMP binding protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189910656|ref|YP_001962211.1| cAMP-binding protein [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167775332|gb|ABZ93633.1| cAMP-binding protein, regulatory protein [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167778968|gb|ABZ97266.1| Putative cAMP binding protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 351

 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 44/133 (33%), Gaps = 16/133 (12%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRD-----FPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           Y+KA  F+    ++ A + F + S                SL       + A  Y  A S
Sbjct: 227 YDKASTFMNAGKYADAIDLFKKVSDRTDSVTQEEEQFVENSLFYMGKSSFKAKDYPSAIS 286

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT--NSP 173
               +I +YP+   +    Y + ++               +   Q   ++ +     +S 
Sbjct: 287 HFSNFIKRYPKGLLLKENLYHLALATEAS--------GDKEKSKQLFQKVTQMPPMDDSI 338

Query: 174 YVKGARFYVTVGR 186
             + A+  +  GR
Sbjct: 339 -SEDAKSKLKGGR 350



 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 63/193 (32%), Gaps = 41/193 (21%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-----MIRDVPYD 151
           L+  A V Y  G +  AA   E+YI  YP+   +D    L+ ++  +      I+++ Y 
Sbjct: 131 LMNVAEVFYKNGNFDHAAYAFEKYIQHYPDGMYLDRAKQLLDLARKKTPFPLTIQELVYK 190

Query: 152 QRATKL-----------MLQYMSRIVERYTNS---------------PYVK--GARFYVT 183
                             +Q  +       NS                Y         V+
Sbjct: 191 PEPGSQTGKLQEMLKTMAVQAPNATSNVDPNSILSQYDKASTFMNAGKYADAIDLFKKVS 250

Query: 184 VGRNQLAAKE--------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
              + +  +E          +G+   K  +Y +AI  F   +  Y      +E +  L  
Sbjct: 251 DRTDSVTQEEEQFVENSLFYMGKSSFKAKDYPSAISHFSNFIKRYPKGLLLKENLYHLAL 310

Query: 236 AYVALALMDEARE 248
           A  A    +++++
Sbjct: 311 ATEASGDKEKSKQ 323


>gi|300722399|ref|YP_003711685.1| hypothetical protein XNC1_1422 [Xenorhabdus nematophila ATCC 19061]
 gi|297628902|emb|CBJ89485.1| putative periplasmic protein contains a protein prenylyltransferase
           domain [Xenorhabdus nematophila ATCC 19061]
          Length = 256

 Score = 52.0 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 50/145 (34%), Gaps = 9/145 (6%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVL-FLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
               + +    +      ++  Y+ AV   L  + + KA   F    + +P +     + 
Sbjct: 117 PSAQTGNKQPAASASTGSEKGDYDAAVSLALNTKEYDKAIASFQGFVKTYPKSKYLSNAN 176

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
                + Y+ GK   AA      +  YP+S+      Y VG+        +  ++     
Sbjct: 177 YWLGQLNYNKGKKDDAAYYFATVVKNYPKSQKSGDSLYKVGL--------IMQEKGQKDK 228

Query: 158 MLQYMSRIVERYTNSPYVKGARFYV 182
                 ++V++Y  S   K A   +
Sbjct: 229 AKAVYQQVVKQYPGSNAAKMAEKKI 253



 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 41/112 (36%), Gaps = 14/112 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             +      V+ Y  S Y+  A +++                    +G+   A   F  V
Sbjct: 154 KAIASFQGFVKTYPKSKYLSNANYWLGQLN--------------YNKGKKDDAAYYFATV 199

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           + NY  ++ + +++ ++          D+A+ V   + ++YP    A+  E 
Sbjct: 200 VKNYPKSQKSGDSLYKVGLIMQEKGQKDKAKAVYQQVVKQYPGSNAAKMAEK 251



 Score = 40.1 bits (93), Expect = 0.29,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 24/61 (39%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           L   EY  AI  FQ  +  Y  +++   A   L +        D+A    + + + YP+ 
Sbjct: 147 LNTKEYDKAIASFQGFVKTYPKSKYLSNANYWLGQLNYNKGKKDDAAYYFATVVKNYPKS 206

Query: 261 Y 261
            
Sbjct: 207 Q 207


>gi|322421504|ref|YP_004200727.1| tetratricopeptide repeat-containing protein [Geobacter sp. M18]
 gi|320127891|gb|ADW15451.1| Tetratricopeptide repeat [Geobacter sp. M18]
          Length = 1097

 Score = 52.0 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 59/146 (40%), Gaps = 23/146 (15%)

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           +A +L ++ + +YP  +  D V Y +  +Y ++          T+  +  M R+V+ +  
Sbjct: 160 EAIALYQKLLDKYPRYEGNDQVLYQMSRAYEEL--------GQTEDAMAVMQRMVKDFPG 211

Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
           S Y+   +F                  Y+    EY+ A   ++ ++    +  + E A+ 
Sbjct: 212 SRYINEVQFRR--------------AEYFFTHREYLEAEAVYKSLVDIGPETSYYELALY 257

Query: 232 RLVEAYVALALMDEA-REVVSLIQER 256
           +L   +    L +E     ++L+  +
Sbjct: 258 KLGWTFYKQELYEEGLNRFIALLDHK 283



 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 30/62 (48%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           L+RG    AI  +Q +L  Y   E  ++ + ++  AY  L   ++A  V+  + + +P  
Sbjct: 153 LERGGAREAIALYQKLLDKYPRYEGNDQVLYQMSRAYEELGQTEDAMAVMQRMVKDFPGS 212

Query: 261 YW 262
            +
Sbjct: 213 RY 214



 Score = 44.3 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 20/158 (12%), Positives = 51/158 (32%), Gaps = 22/158 (13%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           E     L+     +A   + +    +P      + L   +      G+ + A ++ +  +
Sbjct: 147 ETGGEELERGGAREAIALYQKLLDKYPRYEGNDQVLYQMSRAYEELGQTEDAMAVMQRMV 206

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
             +P S+ ++ V +           +  +  R           +V+    + Y + A + 
Sbjct: 207 KDFPGSRYINEVQFRRA--------EYFFTHREYLEAEAVYKSLVDIGPETSYYELALYK 258

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
           +                +Y K+  Y   + RF  +L +
Sbjct: 259 LGWT-------------FY-KQELYEEGLNRFIALLDH 282



 Score = 38.9 bits (90), Expect = 0.82,   Method: Composition-based stats.
 Identities = 7/72 (9%), Positives = 27/72 (37%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
              +Y++       +++  A ++F +  R    + +   +   +A        ++ A ++
Sbjct: 642 AASIYKQGEQANAAKDYRGAADHFLRIGRMAAGSRIRVNAEYDAAVALIQLKDWKGATTV 701

Query: 117 GEEYITQYPESK 128
              +   +P  +
Sbjct: 702 LTGFRELFPGHE 713


>gi|332667614|ref|YP_004450402.1| hypothetical protein Halhy_5706 [Haliscomenobacter hydrossis DSM
           1100]
 gi|332336428|gb|AEE53529.1| Tetratricopeptide TPR_1 repeat-containing protein
           [Haliscomenobacter hydrossis DSM 1100]
          Length = 1046

 Score = 51.7 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 64/231 (27%), Gaps = 46/231 (19%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC-------SRDFPFAGVAR----KSLLM 99
             +       Y +    +K+ N+ +A  +F             +    +A      + L 
Sbjct: 509 PEESSVATANYIQGYNLIKQDNYERARGFFQAAVDGINRNRGQYRNDKIANNVLGDATLR 568

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
                +   +Y  A     E I +  +S N DY  Y   +      R            +
Sbjct: 569 LGDSYFKFNQYDNALRYYNEAIDR--KSANFDYAIYQKAIIEGLRGRRT--------EEI 618

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE------------------------VE 195
             + R+   +  S +   A   +     ++                            + 
Sbjct: 619 VSLERLTRDFPGSEFADDALLRIGQTYQEIGRSNDAIPHLQNLVTKYRGKSPLVNQGFLA 678

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA-LALMDE 245
           +G      G Y  AI  ++ V  N  +   A  A A L E YV  L    E
Sbjct: 679 LGLINYNAGNYDGAINYYKQVFKNSPEPTEANLARASLEEIYVKDLGKPGE 729



 Score = 35.5 bits (81), Expect = 8.5,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 84/245 (34%), Gaps = 40/245 (16%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKS--LLMSAFVQ 104
           L       YQ+    + +  L+      A E   +      P   ++ ++  L     V 
Sbjct: 426 LPPQMQATYQKVAVNRGMQLLQNNENQAAREILQKSLEN--PI-DLSVQAVALFWLGDVA 482

Query: 105 YSAGKYQQAASLGEEY------ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
           +    YQ++A   + +      I+  PE  +V    Y+ G +  +   +    +   +  
Sbjct: 483 HREKNYQESAQYMDRFLGLTRSISNLPEESSVATANYIQGYNLIKQ-DNYERARGFFQAA 541

Query: 159 LQYMSRIVERYTNSPYVK----GARFYVTVGRNQLAAKEVEIGRYY---LKRGE------ 205
           +  ++R   +Y N          A   +     +    +    RYY   + R        
Sbjct: 542 VDGINRNRGQYRNDKIANNVLGDATLRLGDSYFKFNQYD-NALRYYNEAIDRKSANFDYA 600

Query: 206 -YVAAI------PRFQLVL------ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
            Y  AI       R + ++       ++  +E A++A+ R+ + Y  +   ++A   +  
Sbjct: 601 IYQKAIIEGLRGRRTEEIVSLERLTRDFPGSEFADDALLRIGQTYQEIGRSNDAIPHLQN 660

Query: 253 IQERY 257
           +  +Y
Sbjct: 661 LVTKY 665


>gi|167648380|ref|YP_001686043.1| tol-pal system protein YbgF [Caulobacter sp. K31]
 gi|167350810|gb|ABZ73545.1| tol-pal system protein YbgF [Caulobacter sp. K31]
          Length = 283

 Score = 51.7 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 39/102 (38%), Gaps = 14/102 (13%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
             Q  +  VE + +S     AR+++   +                R  Y  A   +   +
Sbjct: 176 AEQAFAGYVEAFPDSAKAPEARYWLGETQ--------------FVREAYGDAAGSYLGAV 221

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
             +     A +A+ +L  + VAL    +A + +  + +RYP+
Sbjct: 222 RGWPQTSWAPDAVLKLSRSLVALKKPADACKTLDELAKRYPK 263


>gi|297170599|gb|ADI21625.1| hypothetical protein [uncultured myxobacterium HF0130_06F04]
          Length = 1249

 Score = 51.7 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 72/195 (36%), Gaps = 19/195 (9%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
           +  D     R    ++   V      +F KA   +++  +++P +     +    AF   
Sbjct: 747 IVDDYPQSPRADGSLFRVGVNAQNFFDFEKALATYSKLVKEYPKSTSRPDAFYNIAFALE 806

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
              +Y++AA     Y   +P+  +   V +  G  Y +M      D R  +         
Sbjct: 807 QLQQYKKAAKQYLAYCDVFPKRDDAPEVCFRAGEVYEKMD-----DPRLVRKTYLNF--- 858

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           ++RY  +             R+++    + + + Y K+G       RFQ+VL  Y+    
Sbjct: 859 IKRYWQNE----------KHRDRVVEAHLRVAKSYEKQGNLKQMRKRFQIVLDEYNKKPD 908

Query: 226 AEEAMARLVEAYVAL 240
           A+ A+    EA   L
Sbjct: 909 AKSALY-AAEAEFKL 922



 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 69/225 (30%), Gaps = 32/225 (14%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFL------KEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
            D    + TD+    ++Y     FL            +A   +     + P       +L
Sbjct: 665 DDPNFAANTDLLSSLQLYRTGAQFLVASELATADKHDEASALYVALVDENPTYANCDAAL 724

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
             +A     + ++  A  + +  +  YP+S   D   + VG++               + 
Sbjct: 725 NNAAVSFEKSQRFDSAMKMYQRIVDDYPQSPRADGSLFRVGVNAQNFFD--------FEK 776

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
            L   S++V+ Y  S     A + +     QL               +Y  A  ++    
Sbjct: 777 ALATYSKLVKEYPKSTSRPDAFYNIAFALEQL--------------QQYKKAAKQYLAYC 822

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
             +   + A E   R  E Y  +      R+        + + YW
Sbjct: 823 DVFPKRDDAPEVCFRAGEVYEKMDDPRLVRKTY----LNFIKRYW 863



 Score = 44.0 bits (103), Expect = 0.021,   Method: Composition-based stats.
 Identities = 31/223 (13%), Positives = 69/223 (30%), Gaps = 59/223 (26%)

Query: 60  VYEKAVLFLKEQNF---SKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYS--------- 106
            YE+ V  L+E+       A   F +   ++P        ++   + + +          
Sbjct: 81  YYEQEVRQLEEEQRVSRLSAIRRFQKFIGNYPDGGPYTADAMFRLSELYFERSYDEFLTG 140

Query: 107 AGKYQQAASL-----------------------GEEYITQYPESKNVDYVYYLVGMSYAQ 143
              Y  A                           +  +T+YP+ + +D  YYL+G    +
Sbjct: 141 QEDYDVAIDAWDPDSGEPEPELPAFRYEPTISMMQRLLTEYPDYRLIDGAYYLLGYCLGE 200

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
                   Q      L+    +V  + ++ +                     I  Y+   
Sbjct: 201 --------QGEEDRSLEIYQDLVAYHPHTRFGSEVWMR--------------IAEYHFNA 238

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
                A+  ++ VL +   +   ++A+ +L   +  LA  ++A
Sbjct: 239 SRLAEALNGYKRVLGD-EASPFFDKALYKLAWTHYRLADPEDA 280



 Score = 39.3 bits (91), Expect = 0.56,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 36/131 (27%), Gaps = 24/131 (18%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A ++  +  F KA          +P    A K              ++ AA   + +I  
Sbjct: 356 ASIYFDQTLFDKAMPALKLVQERYPLHPDAPKVQEQIITAYERNRDFESAAKERDLFIAS 415

Query: 124 YPES-----------KNVDY-------VYYLVGMSYAQMIR------DVPYDQRATKLML 159
           Y +            + VDY         Y   + Y +  +      ++       +   
Sbjct: 416 YSDGGEWQLANKENLEAVDYVAGYTQKAMYAASIFYHEQAQVLEEAGNIDLAVENYRKAA 475

Query: 160 QYMSRIVERYT 170
                 +ERY 
Sbjct: 476 AGYGDYLERYP 486


>gi|146300002|ref|YP_001194593.1| TPR repeat-containing protein [Flavobacterium johnsoniae UW101]
 gi|146154420|gb|ABQ05274.1| Tetratricopeptide TPR_2 repeat protein [Flavobacterium johnsoniae
           UW101]
          Length = 1004

 Score = 51.7 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 88/233 (37%), Gaps = 46/233 (19%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++E    ++ ++    A + ++Q   ++       KS+L    + Y++ + +QA +  ++
Sbjct: 614 LFELGNTYVADKKNDLAIKTYDQLISEYKNGSFTSKSILKQGLIYYNSDRDEQALAKFKK 673

Query: 120 YITQYPESKNV------------------DYVYYLVGM-----SYAQMIRDV------PY 150
              ++P++                     +Y  ++  +     + A++  D        Y
Sbjct: 674 VAAEFPKTPEALEAVSTARLIYVDSGRVDEYASWVKTLDFVSVTDAELDNDTYDAAFKQY 733

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
            Q  +K  +   +  + ++    +   A FY+                YY +  E  +  
Sbjct: 734 SQSNSKAAITGFAGYISKFPAGLHALEANFYLAQL-------------YYAEGSETKSVS 780

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI--QERYPQGY 261
             +Q V+     +E  E+A+ RL + Y+     D+A  V+  +  +  YPQ  
Sbjct: 781 N-YQYVIEQ-PRSEFTEQALNRLAQIYLKAKDCDKAIPVLVRLESEADYPQNK 831



 Score = 44.0 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 59/201 (29%), Gaps = 44/201 (21%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLG---- 117
              +   + + KA  Y       +                +  Y    Y++A S      
Sbjct: 251 GESYFNLKQYDKAIPYLE----QYAGKKGKWNNTDFYQLGYAYYEQKNYEKAISQFNKII 306

Query: 118 --EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
             ++++ Q          YY +G+SY    +         +  L       E   N+   
Sbjct: 307 EGKDFVAQN--------AYYHLGLSYLNTGKK--------QEALNAFKNASEMDFNAQIQ 350

Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
           + A           A    +IG        Y          L  Y +  +  E    LV+
Sbjct: 351 EDAALNY-------AKVSYDIG------NAYQTVPGILLDFLKKYPNNSNRAEVEKLLVD 397

Query: 236 AYVALALMDEAREVVSLIQER 256
           +Y++       +E ++L+++ 
Sbjct: 398 SYIS---TKNYKEALALLEKN 415



 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 79/233 (33%), Gaps = 22/233 (9%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
              YQ+ ++ + V    E N+++A + F   + +        ++    A  +Y     Q 
Sbjct: 421 KAAYQKVLFYRGVELYNELNYTEAGKMFKSAASEQKTPEFTARATFWKAETEYLNDDMQN 480

Query: 113 AASLGEEYITQYPESK----------NVDYVYY------LVGMSYAQMIRDVPYDQRATK 156
           A    +++    P +K          N+ Y Y+          S+   I +   D+   +
Sbjct: 481 ALLTYKQFAGL-PAAKSTDEYKNINYNIGYTYFKLKEYDQAANSFQAQIDNNKEDK--VR 537

Query: 157 LMLQYMSRIVERYTNSPY--VKGARFYVTVGRNQLAAK-EVEIGRYYLKRGEYVAAIPRF 213
           L   Y+     R+ NS Y     A      G++  A   + +    Y    +    I   
Sbjct: 538 LNDSYLRLGDSRFVNSKYTQAMEAYGKAMDGKSVDADYAQFQKALSYGFMSKNDQKISEL 597

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
              L  Y  +E+ ++ +  L   YVA    D A +    +   Y  G +    
Sbjct: 598 NNFLKMYKKSEYRDDVLFELGNTYVADKKNDLAIKTYDQLISEYKNGSFTSKS 650


>gi|308273189|emb|CBX29792.1| hypothetical protein N47_F14870 [uncultured Desulfobacterium sp.]
          Length = 679

 Score = 51.7 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 80/228 (35%), Gaps = 34/228 (14%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
           + S  D      +       +     L LK  N  +A  Y+N+            ++LL 
Sbjct: 93  KNSYDDAIYKFPSSAFTPDALLSAGNLCLKTNNIGEAMAYYNRVIEKHISPHTTVRALLN 152

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
                +  GKY +A S+ E  I  +            +  +  +M         + +  +
Sbjct: 153 KGEALFQKGKYPEALSIYEIIIQAHNTDSGNTEAELGIAKTLFEM--------NSFQKSM 204

Query: 160 QYMSRI------VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
             ++++      + RY +                 +A   + +G  Y + G Y AAI   
Sbjct: 205 ALLNKLGQNHENIYRYPD-----------------IA---LYLGYNYYQLGNYNAAIKNL 244

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
                 Y D++     ++++ +AY A  L + A ++  L+ E++P   
Sbjct: 245 FEYYNIYPDSKVNHLVLSKIGDAYRADKLSESASKIYMLVFEQFPHTE 292



 Score = 40.9 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 58/185 (31%), Gaps = 30/185 (16%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
              R +  K     ++  + +A   +    +         ++ L  A   +    +Q++ 
Sbjct: 145 TTVRALLNKGEALFQKGKYPEALSIYEIIIQAHNTDSGNTEAELGIAKTLFEMNSFQKSM 204

Query: 115 SLGEEYITQYPESKNV----DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           +L           +N+    D   YL G +Y Q+              ++ +      Y 
Sbjct: 205 ALLN---KLGQNHENIYRYPDIALYL-GYNYYQL--------GNYNAAIKNLFEYYNIYP 252

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
           +S              N L     +IG  Y       +A   + LV   +   E A+ ++
Sbjct: 253 DSK------------VNHLVLS--KIGDAYRADKLSESASKIYMLVFEQFPHTEGAQISL 298

Query: 231 ARLVE 235
            RL E
Sbjct: 299 TRLAE 303


>gi|322493689|emb|CBZ28979.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 847

 Score = 51.7 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/209 (11%), Positives = 55/209 (26%), Gaps = 40/209 (19%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           + ++ +A    + +N+++A E +          PF                  G   +A 
Sbjct: 444 KALFNRAFCEDRLKNYTRAIEDYTAALDLDPRNPFTHY------NLGISYDHKGSPARAL 497

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
                 I       +           +          Q A    +   +  +        
Sbjct: 498 QAFTRAIELDDRHPD-----------FFHNRGFTQRKQGAYAAAIADYTTAISLDPKH-- 544

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRY-------------YLKRGEYVAAIPRFQLVLANYS 221
              + +      ++L   E  +  Y             Y  RG  +A + R +  + +++
Sbjct: 545 -FKSHYNRAYCFSKLGRYEEAVAGYAAALQIVSDNANAYHNRGAALAKLGRLEAAVEDFN 603

Query: 222 DA----EHAEEAMARLVEAYVALALMDEA 246
            A         A+      Y  L   D+A
Sbjct: 604 SALRLNPKLAFALNARGLVYDQLQQYDKA 632



 Score = 40.1 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 63/222 (28%), Gaps = 54/222 (24%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY-------SAGKYQQA 113
           Y +A  F K   + +A   +            A + +  +A   +         G+ + A
Sbjct: 549 YNRAYCFSKLGRYEEAVAGYAA----------ALQIVSDNANAYHNRGAALAKLGRLEAA 598

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
                  +   P    + +     G+ Y Q+        +     L   +  +    +  
Sbjct: 599 VEDFNSALRLNP---KLAFALNARGLVYDQL--------QQYDKALADFTEAIRL--DQR 645

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRY-------------YLKR-------GEYVAAIPRF 213
                          +   E+ I  Y             Y  R       G Y AAI  +
Sbjct: 646 NPAWLHNR-GYTYRNMGELELAIADYSASIKLAPHSHTAYTNRAFAFRKLGRYEAAIEDY 704

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQ 254
             VL  +   +   + +      +  L+L ++A R+   ++ 
Sbjct: 705 TKVLCEHPGVQ--TKVLNNRAYCFARLSLFEDAIRDYTEVLA 744


>gi|283954637|ref|ZP_06372155.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni 414]
 gi|283793829|gb|EFC32580.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni 414]
          Length = 208

 Score = 51.7 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 58/146 (39%), Gaps = 9/146 (6%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
              E Y++ +  L++++  KA +++N  + +     +   +L++ A       +Y+ A  
Sbjct: 23  SASEWYKQIIKDLQDKDLEKADDHYNGMASEHVADPLLETTLIILAQAHMDEEEYKLAEF 82

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
             +EY  ++  S+N DY+ YL   +          +Q       + +   ++ Y  + Y 
Sbjct: 83  YLDEYNKKFGNSRNADYIRYLKIKAKFDAFAVPNRNQALMLESQKEIDTFLKDYPYTEYE 142

Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYL 201
              +  +T            +  +YL
Sbjct: 143 PLVQTMLTK---------FNLAVFYL 159


>gi|213622630|ref|ZP_03375413.1| hypothetical protein SentesTyp_36026 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
          Length = 116

 Score = 51.7 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 37/112 (33%), Gaps = 8/112 (7%)

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
             A   F    + +P +     +      + Y+ GK   AA      +  YP+S      
Sbjct: 13  DDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADA 72

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            Y VG+        +  D+  T        +++ +Y  +   K A+  +   
Sbjct: 73  MYKVGV--------IMQDKGDTAKAKAVYQQVINKYPGTDGAKQAQKRLNAM 116



 Score = 45.5 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 41/118 (34%), Gaps = 14/118 (11%)

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
           D+      +      +++Y +S Y   A +++                    +G+   A 
Sbjct: 8   DKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLN--------------YNKGKKDDAA 53

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
             F  V+ NY  +  A +AM ++           +A+ V   +  +YP    A+  + 
Sbjct: 54  YYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVINKYPGTDGAKQAQK 111



 Score = 43.2 bits (101), Expect = 0.036,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 22/123 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    + +I +YP+S       Y +G       +              Y + +V+ Y 
Sbjct: 13  DDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 64

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            SP    A + V V                  +G+   A   +Q V+  Y   + A++A 
Sbjct: 65  KSPKAADAMYKVGVIMQ--------------DKGDTAKAKAVYQQVINKYPGTDGAKQAQ 110

Query: 231 ARL 233
            RL
Sbjct: 111 KRL 113



 Score = 35.9 bits (82), Expect = 5.5,   Method: Composition-based stats.
 Identities = 12/74 (16%), Positives = 27/74 (36%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y    L   +     A  YF    +++P +  A  ++     +    G   +A ++ ++ 
Sbjct: 37  YWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQV 96

Query: 121 ITQYPESKNVDYVY 134
           I +YP +       
Sbjct: 97  INKYPGTDGAKQAQ 110


>gi|116751468|ref|YP_848155.1| sporulation domain-containing protein [Syntrophobacter fumaroxidans
           MPOB]
 gi|116700532|gb|ABK19720.1| Sporulation domain protein [Syntrophobacter fumaroxidans MPOB]
          Length = 538

 Score = 51.7 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 62/210 (29%), Gaps = 30/210 (14%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQC 83
           T+ + I V +        +   Y  ++ +     EVY    VL+     + +A   F + 
Sbjct: 70  TLLYYIGVAYSGRNMHAEALSYYQKALAEKPDYPEVYNAMGVLYAGRGQYDQAQAAFQKV 129

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
               PF    + +      V    G  Q A    +E     P             +S+ +
Sbjct: 130 LAS-PFYETPQFARYNLGLVYEKKGDQQAALQQYQEAARLQPTH----------ALSHHR 178

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
               +   Q       +  +  ++   +                 LA   +  G      
Sbjct: 179 TAMILEA-QGRAGEAQKEFAMALQYSPD-----------------LAEAHMHYGILCFGT 220

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
           G++  A+  F  V+    +   A+EA   L
Sbjct: 221 GDFDTAVHSFARVIRLMPNTVEADEARKYL 250


>gi|237736850|ref|ZP_04567331.1| predicted protein [Fusobacterium mortiferum ATCC 9817]
 gi|229420712|gb|EEO35759.1| predicted protein [Fusobacterium mortiferum ATCC 9817]
          Length = 492

 Score = 51.7 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/149 (14%), Positives = 58/149 (38%), Gaps = 17/149 (11%)

Query: 40  RQSSRDVYLDSVTDVRYQREV---YEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVA 93
            +SS  V      + +   +    +E+     +++N+ +A  YF +     +++      
Sbjct: 345 TESSNTVVTPENLEAQNYTQYLTFFEEGKKNFEKENYVEAALYFEKALEIDKNY---IEK 401

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
           +          +    Y +A +  +  +      +    +YY +GM+Y ++  +      
Sbjct: 402 KDIYFYLGQSYFRTENYSEAVNDYKNSLNLEKNDEKKAEIYYNIGMAYNKLGDN------ 455

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYV 182
             +  + Y++ + + Y NSP+   +  Y+
Sbjct: 456 --EQAVNYLTYVRQNYKNSPWSVKSSLYL 482



 Score = 44.0 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 44/110 (40%), Gaps = 5/110 (4%)

Query: 159 LQYMSRIVERYTNSPYVKGA---RFYVTVGRNQLAAKE--VEIGRYYLKRGEYVAAIPRF 213
           L +     + +    YV+ A      + + +N +  K+    +G+ Y +   Y  A+  +
Sbjct: 366 LTFFEEGKKNFEKENYVEAALYFEKALEIDKNYIEKKDIYFYLGQSYFRTENYSEAVNDY 425

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
           +  L    + E   E    +  AY  L   ++A   ++ +++ Y    W+
Sbjct: 426 KNSLNLEKNDEKKAEIYYNIGMAYNKLGDNEQAVNYLTYVRQNYKNSPWS 475


>gi|90426218|ref|YP_534588.1| hypothetical protein RPC_4747 [Rhodopseudomonas palustris BisB18]
 gi|90108232|gb|ABD90269.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
          Length = 323

 Score = 51.7 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 30/133 (22%), Gaps = 22/133 (16%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
             K              Y  A      ++  +P         Y +G S+ Q         
Sbjct: 198 TPKDEFDLGIGYMQRKDYALAEETMRNFVKNHPGDPLTADSQYWLGESFFQR-------- 249

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           +  +   +    +  +Y  S     A   +      L  KE              AA   
Sbjct: 250 QLYRDAAEAFLAVTTKYDTSAKAPDALLRLGQSLAALKEKE--------------AACAA 295

Query: 213 FQLVLANYSDAEH 225
              V   Y  A  
Sbjct: 296 LGEVTRKYPRASS 308



 Score = 39.3 bits (91), Expect = 0.58,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 42/110 (38%), Gaps = 14/110 (12%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           ++   L  + M   V+ +   P    +++++              G  + +R  Y  A  
Sbjct: 212 RKDYALAEETMRNFVKNHPGDPLTADSQYWL--------------GESFFQRQLYRDAAE 257

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            F  V   Y  +  A +A+ RL ++  AL   + A   +  +  +YP+  
Sbjct: 258 AFLAVTTKYDTSAKAPDALLRLGQSLAALKEKEAACAALGEVTRKYPRAS 307



 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/126 (11%), Positives = 42/126 (33%), Gaps = 14/126 (11%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           L ++      ++ ++  + +++ ++++ A E      ++ P   +   S        +  
Sbjct: 190 LTTLPPSATPKDEFDLGIGYMQRKDYALAEETMRNFVKNHPGDPLTADSQYWLGESFFQR 249

Query: 108 GKYQQAASLGEEYITQ---YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
             Y+ A    E ++     Y  S         +G S A +        +  +     +  
Sbjct: 250 QLYRDA---AEAFLAVTTKYDTSAKAPDALLRLGQSLAAL--------KEKEAACAALGE 298

Query: 165 IVERYT 170
           +  +Y 
Sbjct: 299 VTRKYP 304



 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 28/83 (33%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           R+   +   D       Y     F + Q +  A E F   +  +  +  A  +LL     
Sbjct: 223 RNFVKNHPGDPLTADSQYWLGESFFQRQLYRDAAEAFLAVTTKYDTSAKAPDALLRLGQS 282

Query: 104 QYSAGKYQQAASLGEEYITQYPE 126
             +  + + A +   E   +YP 
Sbjct: 283 LAALKEKEAACAALGEVTRKYPR 305


>gi|95929126|ref|ZP_01311871.1| hypothetical protein Dace_2776 [Desulfuromonas acetoxidans DSM 684]
 gi|95135027|gb|EAT16681.1| hypothetical protein Dace_2776 [Desulfuromonas acetoxidans DSM 684]
          Length = 290

 Score = 51.7 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 25/68 (36%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A     E ++ +A   + +    +P    A ++ L  A     A ++Q      +  I  
Sbjct: 31  ADSLFNEGDYFRAITEYKRYLYTYPDTPAAARAQLNIARSYLQAERWQDGEFALQRVIDN 90

Query: 124 YPESKNVD 131
           YP S   D
Sbjct: 91  YPNSDEAD 98



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 31/79 (39%), Gaps = 8/79 (10%)

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           A   ++ G Y +A +  + Y+  YP++         +  SY Q  R         +    
Sbjct: 31  ADSLFNEGDYFRAITEYKRYLYTYPDTPAAARAQLNIARSYLQAER--------WQDGEF 82

Query: 161 YMSRIVERYTNSPYVKGAR 179
            + R+++ Y NS     AR
Sbjct: 83  ALQRVIDNYPNSDEADIAR 101



 Score = 40.9 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 24/69 (34%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
              G+Y  AI  ++  L  Y D   A  A   +  +Y+      +    +  + + YP  
Sbjct: 35  FNEGDYFRAITEYKRYLYTYPDTPAAARAQLNIARSYLQAERWQDGEFALQRVIDNYPNS 94

Query: 261 YWARYVETL 269
             A     L
Sbjct: 95  DEADIARIL 103



 Score = 35.5 bits (81), Expect = 9.0,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 36/103 (34%), Gaps = 14/103 (13%)

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
           D  +++      +    R +  Y ++P    A+              + I R YL+   +
Sbjct: 32  DSLFNEGDYFRAITEYKRYLYTYPDTPAAARAQ--------------LNIARSYLQAERW 77

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
                  Q V+ NY +++ A+ A    +E+         A + 
Sbjct: 78  QDGEFALQRVIDNYPNSDEADIARILSIESAFKQGKPTVALQT 120


>gi|302338251|ref|YP_003803457.1| Crp/Fnr family transcriptional regulator [Spirochaeta smaragdinae
           DSM 11293]
 gi|301635436|gb|ADK80863.1| putative transcriptional regulator, Crp/Fnr family [Spirochaeta
           smaragdinae DSM 11293]
          Length = 326

 Score = 51.7 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 36/98 (36%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
            +  ++    + Y  AV    ++ + +A + F   + D      A K+        ++ G
Sbjct: 193 PAREELSNAAKAYYNAVSLHSQEKYQEALKEFQHIASDKGDQEYAAKAAFEIGRCYFALG 252

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
           +Y +        I  YP+  ++    + VG  Y +   
Sbjct: 253 RYDECIRHLSGMIKTYPKHPDLTDALFYVGNCYEKKDD 290



 Score = 45.9 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 47/157 (29%), Gaps = 14/157 (8%)

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS--YAQMIRDVPYDQRATKLMLQY 161
            +   K+ QA      Y+T YP  K  D     + ++   AQ          A     + 
Sbjct: 138 YHRTKKFPQALYAYRRYLTYYPSGKYADEANRNIPLAEQNAQGSTRSSVPVSAAAPAREE 197

Query: 162 MSRIVERYTNS------PYVKGARFYVTVG------RNQLAAKEVEIGRYYLKRGEYVAA 209
           +S   + Y N+         + A             +   A    EIGR Y   G Y   
Sbjct: 198 LSNAAKAYYNAVSLHSQEKYQEALKEFQHIASDKGDQEYAAKAAFEIGRCYFALGRYDEC 257

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
           I     ++  Y       +A+  +   Y       +A
Sbjct: 258 IRHLSGMIKTYPKHPDLTDALFYVGNCYEKKDDFPKA 294



 Score = 40.9 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 44/125 (35%), Gaps = 22/125 (17%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL---------------AAKEV-EIGRYY 200
             L    R +  Y +  Y   A   + +                    A +E+    + Y
Sbjct: 146 QALYAYRRYLTYYPSGKYADEANRNIPLAEQNAQGSTRSSVPVSAAAPAREELSNAAKAY 205

Query: 201 LK------RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
                   + +Y  A+  FQ + ++  D E+A +A   +   Y AL   DE    +S + 
Sbjct: 206 YNAVSLHSQEKYQEALKEFQHIASDKGDQEYAAKAAFEIGRCYFALGRYDECIRHLSGMI 265

Query: 255 ERYPQ 259
           + YP+
Sbjct: 266 KTYPK 270


>gi|149193819|ref|ZP_01870917.1| hypothetical protein CMTB2_02003 [Caminibacter mediatlanticus TB-2]
 gi|149135772|gb|EDM24250.1| hypothetical protein CMTB2_02003 [Caminibacter mediatlanticus TB-2]
          Length = 206

 Score = 51.7 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 51/154 (33%), Gaps = 7/154 (4%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           IFF I V F +G    S +      +T       +Y+     +       A     +   
Sbjct: 5   IFFIILVLFFLGC---SQKSQIKKGLTANELHSLLYKDVKNNM----LDDADNVLMELEA 57

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
           ++P +   +  LLM  +       +  A    ++Y  ++   K + +  Y          
Sbjct: 58  NYPNSFYIKDDLLMLFYAHLKNEDFNLAKFYLDQYEKRFASIKEIPWCEYQKIKIDFLAY 117

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           ++   +Q     +L+       +Y NS ++    
Sbjct: 118 QNAYTNQGKILSLLKKCELYKLKYPNSTFIYEVN 151


>gi|94986554|ref|YP_594487.1| hypothetical protein LI0109 [Lawsonia intracellularis PHE/MN1-00]
 gi|94730803|emb|CAJ54165.1| uncharacterized protein conserved in bacteria [Lawsonia
           intracellularis PHE/MN1-00]
          Length = 247

 Score = 51.7 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 51/124 (41%), Gaps = 8/124 (6%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           ++++Y+ A+   +   ++++   F+Q    +P + +   +L       Y+  K+  A  +
Sbjct: 127 EQKMYKDALHLYELHKYNESITLFDQFMEKYPKSRLMPNALYWKGENLYAQQKFADAIFM 186

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            +     YP+ +        VGMSY  +      DQ    L   +   + E Y  S  V+
Sbjct: 187 FKSVTATYPKHQKASDALLKVGMSYRALG-----DQDNATL---HFRALYEDYPKSTAVQ 238

Query: 177 GARF 180
            A+ 
Sbjct: 239 RAQK 242



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/125 (13%), Positives = 40/125 (32%), Gaps = 22/125 (17%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y   KY ++ +L ++++ +YP+S+ +    Y  G +     +            +     
Sbjct: 138 YELHKYNESITLFDQFMEKYPKSRLMPNALYWKGENLYAQQKFAD--------AIFMFKS 189

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +   Y        A   V +    L  ++               A   F+ +  +Y  + 
Sbjct: 190 VTATYPKHQKASDALLKVGMSYRALGDQD--------------NATLHFRALYEDYPKST 235

Query: 225 HAEEA 229
             + A
Sbjct: 236 AVQRA 240



 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 43/113 (38%), Gaps = 14/113 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             +    + +E+Y  S  +  A ++     N  A              ++  AI  F+ V
Sbjct: 145 ESITLFDQFMEKYPKSRLMPNALYWKGE--NLYAQ------------QKFADAIFMFKSV 190

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
            A Y   + A +A+ ++  +Y AL   D A      + E YP+    +  + L
Sbjct: 191 TATYPKHQKASDALLKVGMSYRALGDQDNATLHFRALYEDYPKSTAVQRAQKL 243


>gi|113475981|ref|YP_722042.1| hypothetical protein Tery_2349 [Trichodesmium erythraeum IMS101]
 gi|110167029|gb|ABG51569.1| TPR repeat [Trichodesmium erythraeum IMS101]
          Length = 649

 Score = 51.7 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 66/219 (30%), Gaps = 41/219 (18%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            + +++ K+  +  A    NQ  +  P    A  +      V Y+ GKY  A +   + I
Sbjct: 329 NRGIVYRKQGKYDLALADLNQAIQLNP--KYA-DAYKNRGNVYYNQGKYDLALADYNQAI 385

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              P        Y   G+ Y         DQ    L +   ++ ++      Y   A   
Sbjct: 386 QLNP---KYAEAYNNRGLVYD--------DQGKYDLAIAEFNQAIQLNPKYAY---AYNN 431

Query: 182 VTVGRNQLAAKEVEIGRY--------------------YLKRGEYVAAIPRFQLVLANYS 221
             V  +     ++ +  Y                    YL++G+Y  AI  +   +    
Sbjct: 432 RGVVYDDQGKYDLALADYNQAIQLNPKYAEAYNNRGGVYLEQGKYDLAIADYNQAIQLNP 491

Query: 222 DAEHAEEAMARLVEAYVALALMDEA-REVVSLIQERYPQ 259
                 EA       Y      D A  +    I+   PQ
Sbjct: 492 K---LAEAYNNRGAVYRKQGKYDLALADYNESIRLNNPQ 527



 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/117 (15%), Positives = 38/117 (32%), Gaps = 32/117 (27%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM--SAFVQYS-------AGKYQQ 112
            + +++  ++ +  A                ++   L    A+  Y+        GKY  
Sbjct: 534 NRGLVYNDQRKYDLALA------------DYSQAIQLNPKDAYAYYNRGNVYDDQGKYDL 581

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           A +   + I   P+  N    YY  G++          DQR  +  +    +  + Y
Sbjct: 582 AIADYSQAIQLNPKYAN---AYYTRGLTN--------KDQRNMEKAISDFEKAADLY 627



 Score = 42.4 bits (99), Expect = 0.076,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 50/152 (32%), Gaps = 26/152 (17%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF-----VQYSA 107
           + +Y      +  ++L++  +  A   +NQ  +  P         L  A+     V    
Sbjct: 456 NPKYAEAYNNRGGVYLEQGKYDLAIADYNQAIQLNP--------KLAEAYNNRGAVYRKQ 507

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           GKY  A +   E I     +  +   Y   G+ Y         DQR   L L   S+ ++
Sbjct: 508 GKYDLALADYNESIRLN--NPQLWLPYNNRGLVY--------NDQRKYDLALADYSQAIQ 557

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
                 Y   A +      +     ++ I  Y
Sbjct: 558 LNPKDAY---AYYNRGNVYDDQGKYDLAIADY 586


>gi|46126035|ref|XP_387571.1| hypothetical protein FG07395.1 [Gibberella zeae PH-1]
          Length = 473

 Score = 51.7 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/155 (12%), Positives = 46/155 (29%), Gaps = 35/155 (22%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYF-NQCSRD--FPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           E+  K     +  ++  A +++     ++   P      ++             Y  A +
Sbjct: 5   ELKNKGNKAFQSGDYPSAVDFYSQAIEKNDKEP-TFFTNRAQ-----AYIKTEAYGYAVA 58

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
              + I   P    +   YY  G++   ++R         K  +      V    N+   
Sbjct: 59  DATKAIELNP---KLVKAYYRRGLAKTAILR--------PKEAIDDFKTCVTLDPNNK-- 105

Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
             AR  +   +              +++  + AAI
Sbjct: 106 -DARLKLEDCKKI------------VRQMAFFAAI 127


>gi|83815402|ref|YP_445160.1| TPR repeat-containing protein [Salinibacter ruber DSM 13855]
 gi|83756796|gb|ABC44909.1| Tetratricopeptide repeat family [Salinibacter ruber DSM 13855]
          Length = 990

 Score = 51.7 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 50/144 (34%), Gaps = 17/144 (11%)

Query: 96  SLLMSAFVQYSA-GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           +    A   + A G+   A +     + + P+        Y +  ++          Q  
Sbjct: 573 AQYELANALFRAAGRPDSAQTWFRRVLDETPDHPVAPQALYGLAQAH--------RAQGD 624

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGR------NQLAAKEVEIGRYY--LKRGEY 206
           T    +   R+++ + ++P  K AR  + +          ++  +    R Y   + G +
Sbjct: 625 TAAGDEVYRRLIDEHPDTPIAKRAREQLGLATTDEDPERTVSRADSAYARAYEAWRSGRH 684

Query: 207 VAAIPRFQLVLANYSDAEHAEEAM 230
            AA+  F  V   Y +   A  A+
Sbjct: 685 DAALRAFLKVADAYRETSVAPRAL 708



 Score = 40.5 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 1/77 (1%)

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           A  E+    +    G   +A   F+ VL    D   A +A+  L +A+ A        EV
Sbjct: 573 AQYELANALF-RAAGRPDSAQTWFRRVLDETPDHPVAPQALYGLAQAHRAQGDTAAGDEV 631

Query: 250 VSLIQERYPQGYWARYV 266
              + + +P    A+  
Sbjct: 632 YRRLIDEHPDTPIAKRA 648



 Score = 36.6 bits (84), Expect = 3.2,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 42/102 (41%), Gaps = 20/102 (19%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG--RYYLKRGEYVAA 209
           Q +    +Q  + ++  + NS +V  A               + IG  RYY +   YV A
Sbjct: 90  QSSFGEAIQKSAAVLREHPNSEWVDDAL--------------LLIGRSRYYQQ--NYVGA 133

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
           + +F+  +A   DAE   EA  RL +  V      EA + + 
Sbjct: 134 VQKFREAIAL--DAEREGEARFRLAQTLVVAGRYREAADALR 173



 Score = 35.9 bits (82), Expect = 5.8,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 24/77 (31%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
              D    V      Y +A    +      A   F + +  +    VA ++LL +  V +
Sbjct: 657 TDEDPERTVSRADSAYARAYEAWRSGRHDAALRAFLKVADAYRETSVAPRALLAAGVVYH 716

Query: 106 SAGKYQQAASLGEEYIT 122
              ++  +      +  
Sbjct: 717 RTARHDSSGQGRARFTR 733


>gi|94267784|ref|ZP_01290991.1| hypothetical protein MldDRAFT_2604 [delta proteobacterium MLMS-1]
 gi|93451862|gb|EAT02601.1| hypothetical protein MldDRAFT_2604 [delta proteobacterium MLMS-1]
          Length = 109

 Score = 51.7 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
            LA  E+ +  +Y+K  EY  A  R   +L  Y ++
Sbjct: 18  FLARHEMFVATFYVKTKEYQQAEGRLNHLLETYPES 53


>gi|325267811|ref|ZP_08134461.1| hypothetical protein HMPREF9098_2189 [Kingella denitrificans ATCC
           33394]
 gi|324980692|gb|EGC16354.1| hypothetical protein HMPREF9098_2189 [Kingella denitrificans ATCC
           33394]
          Length = 149

 Score = 51.7 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/152 (13%), Positives = 49/152 (32%), Gaps = 11/152 (7%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
                    +      R     Y++A    +   +++A +           + +A+ SL 
Sbjct: 5   PTADKPPARIAPKPASRNSSAAYQEATRLYQAGKYAEAAKLLRD-DGGGDGSELAQSSLH 63

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS-YAQMIRDVPYDQRATKL 157
           +    Q      Q    +G+ +  ++P+  +     Y VG   +    +D+  D      
Sbjct: 64  LLLLTQQKLNHCQSIIQIGQRFSRRFPQHPSAADALYAVGECQWKMQQQDIARD------ 117

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
                 ++  RY  +     A+  +   R+ L
Sbjct: 118 ---TWRQLRLRYPKTDAAARAQIRLQSQRSNL 146


>gi|260683054|ref|YP_003214339.1| putative multiprotein complex assembly protein [Clostridium
           difficile CD196]
 gi|260686652|ref|YP_003217785.1| putative multiprotein complex assembly protein [Clostridium
           difficile R20291]
 gi|260209217|emb|CBA62488.1| putative multiprotein complex assembly protein [Clostridium
           difficile CD196]
 gi|260212668|emb|CBE03728.1| putative multiprotein complex assembly protein [Clostridium
           difficile R20291]
          Length = 465

 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 45/132 (34%), Gaps = 9/132 (6%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           ++   +    V  + ++Y +A+   K + + KA + F              +S+   A  
Sbjct: 330 KNKEPEREITVADEEDLYYQALNLKKNKEYEKAIDNFKSVVSSGKTKKYISESIYQLAIT 389

Query: 104 QYSAGKYQQAASLGEEYITQYP-ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
               G   +A    ++YI  Y    +  D  YY +GM Y         D    K   Q  
Sbjct: 390 NKLLGNKDEAIKYYKKYINTYTKNDQYYDDSYYELGMLYY--------DNGDLKNAQQTF 441

Query: 163 SRIVERYTNSPY 174
             +     +S Y
Sbjct: 442 YSLRSEVPDSMY 453


>gi|327541184|gb|EGF27728.1| repeat protein [Rhodopirellula baltica WH47]
          Length = 1113

 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/220 (12%), Positives = 66/220 (30%), Gaps = 43/220 (19%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y K +  L+ Q   +A E F++     P   ++  +LL          +   + +    Y
Sbjct: 668 YAKGMAELQSQQHERAAESFSELIDQNPDHTLSDDALLSRGIAHRHLNREADSRNDLNAY 727

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVP-----------------------------YD 151
           +   P   N+ +  Y + +      + V                               +
Sbjct: 728 LDSKPTGNNLGHALYELALLDQNASQTVQAAESLQRIVDEVPDYPDMDKVLYELGWSLRE 787

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
                  L    +++ +Y ++  V  A                 +G+ + +  ++  A  
Sbjct: 788 SGKDDQALTKFEQLIAKYPDNALVADAA--------------YFVGQDHYRNSKWGDAAD 833

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
            F++     +D +  E+++ RL   +       EA     
Sbjct: 834 AFKIAADKSNDLDLKEKSLYRLGWCFYKQQKYAEAEAAFK 873



 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/224 (14%), Positives = 71/224 (31%), Gaps = 36/224 (16%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR------DFPFAGVAR-KS 96
           +++   +       +  Y+   L   EQ ++ A EYF             PFA  A+  +
Sbjct: 614 KELIRSNGESRMADQARYKLGQLANGEQQYAAAIEYFEPILASKRDAGLLPFARYAKGMA 673

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
            L        + ++++AA    E I Q P+    D      G+++  + R+         
Sbjct: 674 EL-------QSQQHERAAESFSELIDQNPDHTLSDDALLSRGIAHRHLNREAD------- 719

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                ++  ++       +  A + + +     +                V A    Q +
Sbjct: 720 -SRNDLNAYLDSKPTGNNLGHALYELALLDQNASQT--------------VQAAESLQRI 764

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           +    D    ++ +  L  +       D+A      +  +YP  
Sbjct: 765 VDEVPDYPDMDKVLYELGWSLRESGKDDQALTKFEQLIAKYPDN 808



 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 63/196 (32%), Gaps = 35/196 (17%)

Query: 75  KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD--- 131
           ++   ++   ++ P + +  ++       QY+ G+  +A       +       ++    
Sbjct: 150 ESIATYDTLIKEIPDSRLLDRAYFYRGEAQYALGELDKAIESYNAMMKL----DDIASSA 205

Query: 132 ---YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
                 Y  G++  +        Q+          ++++   +S  V      +      
Sbjct: 206 LRCDALYARGVALEE--------QKNYDQAQSSYQQLLQACADSDLVVDVEIRMGDM--H 255

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA--MARLVEAYVALALMDEA 246
           L   E++             A+ RF  V  N +DA   ++A    R   AY       +A
Sbjct: 256 LLQGEMQN------------AVERFDSVATN-ADATAEDKAYSFFRQGYAYAQDGDPTKA 302

Query: 247 REVVSLIQERYPQGYW 262
                 +  ++PQ  +
Sbjct: 303 SASYEKLLTQFPQSPY 318



 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 12/135 (8%), Positives = 36/135 (26%), Gaps = 17/135 (12%)

Query: 39   ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
                S     D       +  +        +   +  A  +++     FP      +   
Sbjct: 918  ADNDSAKTVRDKAERQVRELILLHGGQSAAQLGQYEDAIGWYDALRERFPATTYLPQVFY 977

Query: 99   MSAFVQYSAGKYQQAA----SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
               F   +AG  ++A      + + +      S+      +++G  +           + 
Sbjct: 978  EIGFAAQNAGDDEKALKFYSEVADNF-----RSEIAARARFMMGEIHFAN--------KT 1024

Query: 155  TKLMLQYMSRIVERY 169
                +    R++  +
Sbjct: 1025 FDKAIPEFQRVMFGF 1039



 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 76/250 (30%), Gaps = 33/250 (13%)

Query: 52  TDVRYQREVYE---KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
            D   + + Y    +   + ++ + +KA   + +    FP +  A  + L SA   Y AG
Sbjct: 275 ADATAEDKAYSFFRQGYAYAQDGDPTKASASYEKLLTQFPQSPYAAAATLASAQTLYQAG 334

Query: 109 KYQQAASLGEEYITQYPESKNVD---YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               AAS    +      +  +      ++L  +      RD      A K      S +
Sbjct: 335 DLPGAAS---RFRDVLQGTDPIAATESAHWLARIDLGIANRDPSKTAEAAKSAYDVASEL 391

Query: 166 VERYTNSPYVKGARF-----------YVTVGRNQ------------LAAKEVEIGRYY-L 201
           + +     +    +             +     Q            LA + +    +  L
Sbjct: 392 IAKGPQGSFAVALKLDAAEALSLQPDRLNDAFEQYQSIASEHSDHPLAPRALYNAAFVAL 451

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           + G    A+       + +S    A +A+    EA +A      A E    + +      
Sbjct: 452 QLGNTEQAVKLADSFESKFSSDPLAPDALFVGAEALLASGEASSAAERYQTLIDNAKHRD 511

Query: 262 WARYVETLVK 271
             +    +++
Sbjct: 512 HPQRATWILR 521



 Score = 39.7 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 47/130 (36%), Gaps = 15/130 (11%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D  +       +Y + V   +++N+ +A   + Q  +    + +     +    +    G
Sbjct: 200 DIASSALRCDALYARGVALEEQKNYDQAQSSYQQLLQACADSDLVVDVEIRMGDMHLLQG 259

Query: 109 KYQQAASLGEEY--ITQY--PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           + Q A    E +  +       +++  Y ++  G +YAQ       D            +
Sbjct: 260 EMQNAV---ERFDSVATNADATAEDKAYSFFRQGYAYAQ-----DGDPT---KASASYEK 308

Query: 165 IVERYTNSPY 174
           ++ ++  SPY
Sbjct: 309 LLTQFPQSPY 318



 Score = 39.3 bits (91), Expect = 0.58,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 62/215 (28%), Gaps = 25/215 (11%)

Query: 51   VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
              +       Y       +   +  A + F   +       +  KSL    +  Y   KY
Sbjct: 806  PDNALVADAAYFVGQDHYRNSKWGDAADAFKIAADKSNDLDLKEKSLYRLGWCFYKQQKY 865

Query: 111  QQAASLGEEYITQYPESKNVDYVYYLVG---MSYAQMIRDVPYDQRATKLMLQYM---SR 164
             +A +  +             YV    G   +    MI +  + Q   +  L+       
Sbjct: 866  AEAEAAFKR-----------QYVEVQQGGLLLDSMMMIGESRFKQEQYETALRAYTKARE 914

Query: 165  IVERYTNSPYV--KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
             +E   +S       A   V           +  G+   + G+Y  AI  +  +   +  
Sbjct: 915  KIEADNDSAKTVRDKAERQVRELIL------LHGGQSAAQLGQYEDAIGWYDALRERFPA 968

Query: 223  AEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
              +  +    +  A       ++A +  S + + +
Sbjct: 969  TTYLPQVFYEIGFAAQNAGDDEKALKFYSEVADNF 1003



 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 37/97 (38%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
             T       +YE A+L        +A E   +   + P      K L    +    +GK
Sbjct: 731 KPTGNNLGHALYELALLDQNASQTVQAAESLQRIVDEVPDYPDMDKVLYELGWSLRESGK 790

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
             QA +  E+ I +YP++  V    Y VG  + +  +
Sbjct: 791 DDQALTKFEQLIAKYPDNALVADAAYFVGQDHYRNSK 827


>gi|304312903|ref|YP_003812501.1| hypothetical protein HDN1F_32850 [gamma proteobacterium HdN1]
 gi|301798636|emb|CBL46868.1| Conserved hypothetical protein [gamma proteobacterium HdN1]
          Length = 314

 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/135 (13%), Positives = 47/135 (34%), Gaps = 12/135 (8%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG--K 109
                ++  Y  A+  +K + + KA           P + +   +      +   A    
Sbjct: 187 PATEEEKRAYTLALDNVKSKQYQKAISQLESLLTTAPNSQIVPNAHYWLGELYMVAQPTD 246

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVG-MSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
             +A +  +E +  Y ++  V    + +G +S  +   D             Y +R+++ 
Sbjct: 247 LDRAKAHFQELLKYYADNPKVPDALFKLGKLSALRGEND---------RAKLYFNRVIKE 297

Query: 169 YTNSPYVKGARFYVT 183
           + ++     A+ Y+ 
Sbjct: 298 FPDTQAATLAKDYLR 312



 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 46/131 (35%), Gaps = 22/131 (16%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA-QMIRDVPYDQRATKLMLQYMSR 164
            + +YQ+A S  E  +T  P S+ V   +Y +G  Y      D+            +   
Sbjct: 204 KSKQYQKAISQLESLLTTAPNSQIVPNAHYWLGELYMVAQPTDLDR-------AKAHFQE 256

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +++ Y ++P V  A F +          E +  + Y  R            V+  + D +
Sbjct: 257 LLKYYADNPKVPDALFKLGKLSAL--RGENDRAKLYFNR------------VIKEFPDTQ 302

Query: 225 HAEEAMARLVE 235
            A  A   L  
Sbjct: 303 AATLAKDYLRR 313



 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 15/119 (12%), Positives = 42/119 (35%), Gaps = 12/119 (10%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           +  +  +  +  ++    NS  V  A +++          +++  +              
Sbjct: 206 KQYQKAISQLESLLTTAPNSQIVPNAHYWLGELYMVAQPTDLDRAK------------AH 253

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           FQ +L  Y+D     +A+ +L +        D A+   + + + +P    A   +  ++
Sbjct: 254 FQELLKYYADNPKVPDALFKLGKLSALRGENDRAKLYFNRVIKEFPDTQAATLAKDYLR 312


>gi|118401580|ref|XP_001033110.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89287457|gb|EAR85447.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 3068

 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 69/216 (31%), Gaps = 38/216 (17%)

Query: 71   QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
            +N+  A E +    ++        ++L   A   Y+    + A    ++ +   P+  N 
Sbjct: 2799 ENYDTAIEKYENLLKN----KQDDEALQYLADCYYTKDDVENAIYYYKQCLEINPKRPN- 2853

Query: 131  DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYVKGARFYVTV--GR 186
                Y +G +Y          Q   +   Q     ++  T   S Y   A  Y       
Sbjct: 2854 --CLYNLGNAY--------CTQNNYEEAQQAYIECIQLDTTNASAYYNLANVYYIQNDYE 2903

Query: 187  NQLAAKEV-------------EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
            N L   E+              I   Y+   ++  AI   Q +L  Y D     +   +L
Sbjct: 2904 NALINFELAIEKDPSNVEWRNYIAGLYIDNNQFDKAI---QHLLKAYDDGTSNFDTCFKL 2960

Query: 234  VEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
             +AY     + EAR+ + +  E  P          L
Sbjct: 2961 AQAYYGQQNLSEARQYIKVAVEIDPDND---DAYRL 2993



 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 36/184 (19%)

Query: 64   AVLFLKE-QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
              ++L +  N ++A + F Q     P    + K+         S   ++ AA   ++ I+
Sbjct: 2689 GKIYLNKLNNINRAIDCFKQIISIEP--KYS-KAHFQLGMAYQSRKDFKLAAECFKQCIS 2745

Query: 123  QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
              P + +             Q +  +  +   T+  L Y  + +    N           
Sbjct: 2746 INPNNADA-----------WQQLGTIFQETGNTEKALMYFQKGLVFNPN----------- 2783

Query: 183  TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
                +    K   I   Y     Y  AI +++ +L N  D    +EA+  L + Y     
Sbjct: 2784 ----DFQLQK--GIANCYYFTENYDTAIEKYENLLKNKQD----DEALQYLADCYYTKDD 2833

Query: 243  MDEA 246
            ++ A
Sbjct: 2834 VENA 2837


>gi|50546124|ref|XP_500589.1| YALI0B06963p [Yarrowia lipolytica]
 gi|49646455|emb|CAG82820.1| YALI0B06963p [Yarrowia lipolytica]
          Length = 479

 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/148 (13%), Positives = 44/148 (29%), Gaps = 27/148 (18%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQA 113
              ++  +    L   +++ A + + Q     P +    A ++             Y  A
Sbjct: 2   SAEDLKNQGNKALLSGHYNDAVDLYTQAIELNPQSAVYYANRAQ-----AHIKNEAYGVA 56

Query: 114 ASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
                + I   P      Y   Y+   +S   +I+         K  L    ++V+    
Sbjct: 57  IEDSSKAIELDPT-----YIKAYFRRAVSNTAIIKH--------KDALVDFKKVVQLAPG 103

Query: 172 SPYVKGARFYVTVGRN--QLAAKEVEIG 197
                 A+  +   +   + AA  + I 
Sbjct: 104 D---NAAKQRLNECQKLVRKAAFALAIA 128


>gi|255100464|ref|ZP_05329441.1| putative multiprotein complex assembly protein [Clostridium
           difficile QCD-63q42]
 gi|255306404|ref|ZP_05350575.1| putative multiprotein complex assembly protein [Clostridium
           difficile ATCC 43255]
          Length = 463

 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 45/132 (34%), Gaps = 9/132 (6%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           ++   +    V  + ++Y +A+   K + + KA + F              +S+   A  
Sbjct: 328 KNKEPEREITVADEEDLYYQALNLKKNKEYEKAIDNFKSVVSSGKTKKYISESIYQLAIT 387

Query: 104 QYSAGKYQQAASLGEEYITQYP-ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
               G   +A    ++YI  Y    +  D  YY +GM Y         D    K   Q  
Sbjct: 388 NKLLGNKDEAIKYYKKYINTYTKNDQYYDDSYYELGMLYY--------DNGDLKNAQQTF 439

Query: 163 SRIVERYTNSPY 174
             +     +S Y
Sbjct: 440 YSLRSEVPDSMY 451


>gi|282891878|ref|ZP_06300357.1| hypothetical protein pah_c200o023 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498138|gb|EFB40478.1| hypothetical protein pah_c200o023 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 322

 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 58/160 (36%), Gaps = 4/160 (2%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A + +++ +   P   +A K+L       +    ++++       I ++P+ +     Y 
Sbjct: 143 ALQIYDEVTAAMPSQDIAAKALYCKGLYLWELKDFRESVDSFYLLIRRFPKHELAPESY- 201

Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYM--SRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
            V +S   + +     Q    L    +   +    +     +      V   +   A   
Sbjct: 202 -VAISRVYLEQSAVELQNPDILAFADVNKRKFERDFPGEERLLEVEANVLKIKEIYAHGL 260

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
            E G +Y ++G   AAI  +Q  +A +   E AE    RL
Sbjct: 261 FETGSFYERKGHPKAAIIYYQNTIAKFPGTEIAERCRKRL 300


>gi|254974992|ref|ZP_05271464.1| putative multiprotein complex assembly protein [Clostridium
           difficile QCD-66c26]
 gi|255092380|ref|ZP_05321858.1| putative multiprotein complex assembly protein [Clostridium
           difficile CIP 107932]
 gi|255314120|ref|ZP_05355703.1| putative multiprotein complex assembly protein [Clostridium
           difficile QCD-76w55]
 gi|255516798|ref|ZP_05384474.1| putative multiprotein complex assembly protein [Clostridium
           difficile QCD-97b34]
 gi|255649899|ref|ZP_05396801.1| putative multiprotein complex assembly protein [Clostridium
           difficile QCD-37x79]
          Length = 463

 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 45/132 (34%), Gaps = 9/132 (6%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           ++   +    V  + ++Y +A+   K + + KA + F              +S+   A  
Sbjct: 328 KNKEPEREITVADEEDLYYQALNLKKNKEYEKAIDNFKSVVSSGKTKKYISESIYQLAIT 387

Query: 104 QYSAGKYQQAASLGEEYITQYP-ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
               G   +A    ++YI  Y    +  D  YY +GM Y         D    K   Q  
Sbjct: 388 NKLLGNKDEAIKYYKKYINTYTKNDQYYDDSYYELGMLYY--------DNGDLKNAQQTF 439

Query: 163 SRIVERYTNSPY 174
             +     +S Y
Sbjct: 440 YSLRSEVPDSMY 451


>gi|322433062|ref|YP_004210311.1| hypothetical protein protein [Acidobacterium sp. MP5ACTX9]
 gi|321165289|gb|ADW70993.1| Tetratricopeptide TPR_1 repeat-containing protein [Acidobacterium
           sp. MP5ACTX9]
          Length = 750

 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 44/124 (35%), Gaps = 18/124 (14%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
                R +Y +A++   +    +A     + +  FP +  A +      F  Y   KY  
Sbjct: 575 GKDNARALYYRALVERNQGQVDEAIVDLQKVAAQFPRSRDAHR---ELGFSYYQQHKYPL 631

Query: 113 AASLGEEYITQYPESKNVDY---VYYLV-GM--------SYAQMIRDVPYDQRATKLMLQ 160
           A +  E   +  P+     Y   + Y   G+        +Y    +D   D  A+   L+
Sbjct: 632 ARAEYETVQSIDPDDLAAHYNLAILYRRLGLKDKATEQAAYFADQKD---DPTASVYALE 688

Query: 161 YMSR 164
           Y+ +
Sbjct: 689 YLRK 692



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 66/190 (34%), Gaps = 34/190 (17%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
              +  L  Q ++ +   F   ++  P    A  + +   ++Q+   KY +A    E+ +
Sbjct: 516 NYGIGLLDAQQYAGSVAAFEHVAKLRPDYPDAP-TNIGLTYIQW--EKYDEAMPYIEKSL 572

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                 K+     Y   +        V  +Q      +  + ++  ++  S         
Sbjct: 573 AL---GKDNARALYYRAL--------VERNQGQVDEAIVDLQKVAAQFPRSRD------- 614

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
                   A +E+  G  Y ++ +Y  A   ++ V +   D   A   +A L   Y  L 
Sbjct: 615 --------AHREL--GFSYYQQHKYPLARAEYETVQSIDPDDLAAHYNLAIL---YRRLG 661

Query: 242 LMDEAREVVS 251
           L D+A E  +
Sbjct: 662 LKDKATEQAA 671


>gi|126699042|ref|YP_001087939.1| putative multiprotein complex assembly protein [Clostridium
           difficile 630]
 gi|115250479|emb|CAJ68303.1| putative TPR repeat-containing protein [Clostridium difficile]
          Length = 452

 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 45/132 (34%), Gaps = 9/132 (6%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           ++   +    V  + ++Y +A+   K + + KA + F              +S+   A  
Sbjct: 317 KNKEPEREITVADEEDLYYQALNLKKNKEYEKAIDNFKSIVSSGKTKKYISESIYQLAIT 376

Query: 104 QYSAGKYQQAASLGEEYITQYP-ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
               G   +A    ++YI  Y    +  D  YY +GM Y         D    K   Q  
Sbjct: 377 NKLLGNKDEAIKYYKKYINTYTKNDQYYDDSYYELGMLYY--------DNGDLKNAQQTF 428

Query: 163 SRIVERYTNSPY 174
             +     +S Y
Sbjct: 429 YSLRSEVPDSMY 440


>gi|315932209|gb|EFV11152.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni 327]
          Length = 217

 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 59/157 (37%), Gaps = 9/157 (5%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
              D         E Y++ +  L++++  KA +++N  + +     +   +L++ A    
Sbjct: 22  TKNDEGLYNLSASEWYKQIIKDLQDKDLEKADDHYNGMASEHVADPLLETTLIILAQAHM 81

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
              +Y+ A    +EY  ++  S+N DY+ YL   +          +Q       + +   
Sbjct: 82  DEEEYKLAEFYLDEYNKKFGNSRNADYIRYLKIKAKFDAFAVPNRNQALMLESQKEIDTF 141

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
           ++ Y  + Y    +  +T            +  +YL 
Sbjct: 142 LKDYPYTEYEPLVQTMLTK---------FNLAVFYLN 169


>gi|220918558|ref|YP_002493862.1| TPR repeat-containing protein [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219956412|gb|ACL66796.1| TPR repeat-containing protein [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 1191

 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 56/143 (39%), Gaps = 29/143 (20%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           +QA +L +  I++YP    +D V Y +G + ++  R+ P         L+    +++++ 
Sbjct: 160 EQAVALYKAIISRYPSYPRLDEVLYFLGENLSRRDRNDP-------DALKAYRALIQKFP 212

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR-------GEYVAAIPRFQLVLANYSDA 223
           +S YV  A               +  G YY +R       G    A+  ++     Y ++
Sbjct: 213 SSRYVPDAW--------------MAFGEYYFERANKNDRNGNLRKALESYRKAAE-YQES 257

Query: 224 EHAEEAMARLVEAYVALALMDEA 246
                A+ +    +  L    EA
Sbjct: 258 SVYGYALYKQGWVHYNLGNWSEA 280



 Score = 39.7 bits (92), Expect = 0.43,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 29/74 (39%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D  T        Y  +V +++     +A E   Q  + +P   +A KSL  +A    +  
Sbjct: 703 DWPTSRLAPTAYYNASVDYVRAHRLDRAMEIREQFLQRYPTHTLAPKSLYDNAEAYEAVA 762

Query: 109 KYQQAASLGEEYIT 122
            + +AA   E Y  
Sbjct: 763 DFGRAADHYERYFQ 776



 Score = 35.9 bits (82), Expect = 5.9,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 69/208 (33%), Gaps = 29/208 (13%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
                ++    Y+ A L  +   F +A + F + + D P   +A  S  +        G 
Sbjct: 582 QPRGEKWVEVAYKLANLHYRHNAFGEASDLFTRIALDHPQHELAGYSANLVLDAYNLLGD 641

Query: 110 YQQAASLGEEY------ITQYPESKN-VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
           ++      + +      I  +P+ K+ +  V      S  ++I +    Q       QY+
Sbjct: 642 WRNVNGWAKRFYDNRALIAAHPQLKDDLSRVIEQ---SAFKVIEEKEKAQDFVGAAEQYL 698

Query: 163 SRIVERYTNSPYVKGA--RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
           +     +  S     A     V   R     + +EI      R ++          L  Y
Sbjct: 699 A-FARDWPTSRLAPTAYYNASVDYVRAHRLDRAMEI------REQF----------LQRY 741

Query: 221 SDAEHAEEAMARLVEAYVALALMDEARE 248
                A +++    EAY A+A    A +
Sbjct: 742 PTHTLAPKSLYDNAEAYEAVADFGRAAD 769


>gi|156342046|ref|XP_001620860.1| hypothetical protein NEMVEDRAFT_v1g222634 [Nematostella vectensis]
 gi|156206260|gb|EDO28760.1| predicted protein [Nematostella vectensis]
          Length = 1124

 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 75/206 (36%), Gaps = 35/206 (16%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y++        ++ +A   + + S D        K+ L+     Y  GKY++A    +E 
Sbjct: 682 YQQGKYEEARGHYKEALRLYQKTSDDQGQG----KAHLLIGNTHYQQGKYEEAIGHYKEA 737

Query: 121 ITQYPESKNVDY----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
           +  Y ++ + D      + L+G ++ Q  +     +   K  L+   +       S    
Sbjct: 738 LRLYQKTSD-DQGQGKAHLLIGNTHYQQGK-YEEARGHYKEALRLYQK------TSDDQG 789

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE---EAMARL 233
             + ++             IG  + ++G+Y  AI  ++  L  Y      +   EA   +
Sbjct: 790 QGKAHLL------------IGNTHYQQGKYEEAIGHYKEALRLYQKTSDDQGQGEAHLLI 837

Query: 234 VEAYVALALMDEA----REVVSLIQE 255
              +      +EA    +E + L Q+
Sbjct: 838 GNTHYQQGKYEEAIGHYKEALRLYQK 863



 Score = 49.0 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 59/168 (35%), Gaps = 27/168 (16%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR---KSLLMSAFVQYSAGKYQQAASLGEEY 120
                ++  + +A  ++ +  R +      +   K+ L+     Y  GKY++A    +E 
Sbjct: 718 GNTHYQQGKYEEAIGHYKEALRLYQKTSDDQGQGKAHLLIGNTHYQQGKYEEARGHYKEA 777

Query: 121 ITQYPESKNVDY----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
           +  Y ++ + D      + L+G ++ Q        Q   +  + +    +  Y  +    
Sbjct: 778 LRLYQKTSD-DQGQGKAHLLIGNTHYQ--------QGKYEEAIGHYKEALRLYQKT--SD 826

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
                            + IG  + ++G+Y  AI  ++  L  Y    
Sbjct: 827 DQGQ---------GEAHLLIGNTHYQQGKYEEAIGHYKEALRLYQKTS 865



 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 75/206 (36%), Gaps = 34/206 (16%)

Query: 64   AVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR---KSLLMSAFVQYSAGKYQQAASLGEEY 120
                 ++  + +A  ++ +  R +      +   K+ L+     Y  GKY++A    +E 
Sbjct: 878  GNTHNQQGKYEEAIGHYKEALRLYQKTSDDQGQGKAHLLIGNTHYQQGKYEEAIGHSKEA 937

Query: 121  ITQYPESKN---VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN-SPYVK 176
            +  Y ++ +       + L+G ++ Q        Q   +  + +    +  Y   S    
Sbjct: 938  LRLYQKTSDDQGQGEAHLLIGKTHYQ--------QGKYEEAIGHYKEALRLYQKTSDDQG 989

Query: 177  GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE---EAMARL 233
              + ++             IG  + ++G+Y  AI  ++  L  Y      +   EA   +
Sbjct: 990  QGKAHLL------------IGDIHYQQGKYEEAIGHYKEALRLYQKTSDDQGQGEAHLLI 1037

Query: 234  VEAYVALALMDEA----REVVSLIQE 255
             + +      +EA    +E + L Q+
Sbjct: 1038 GKTHYHQGKYEEAIGHYKEALRLYQK 1063



 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 58/168 (34%), Gaps = 27/168 (16%)

Query: 64   AVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR---KSLLMSAFVQYSAGKYQQAASLGEEY 120
                 ++  + +A  ++ +  R +      +   K+ L+   + Y  GKY++A    +E 
Sbjct: 958  GKTHYQQGKYEEAIGHYKEALRLYQKTSDDQGQGKAHLLIGDIHYQQGKYEEAIGHYKEA 1017

Query: 121  ITQYPESKN---VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN-SPYVK 176
            +  Y ++ +       + L+G ++          Q   +  + +    +  Y   S    
Sbjct: 1018 LRLYQKTSDDQGQGEAHLLIGKTHYH--------QGKYEEAIGHYKEALRLYQKTSDDQG 1069

Query: 177  GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
              + ++             IG  + ++G+Y  A    +  L  Y    
Sbjct: 1070 QGKAHLL------------IGETHYQQGKYEEARGHSKEALRLYQKTS 1105



 Score = 46.3 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 68/193 (35%), Gaps = 31/193 (16%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++        ++ +A   + + S D         + L+     Y  GKY++A    +E +
Sbjct: 603 QQGKYEEARGHYKEALRLYQKTSDDQGQGE----AHLLIGNTHYQQGKYEEAIGHYKEAL 658

Query: 122 TQYPESKNVDY----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
             Y ++ + D      + L+G ++ Q  +     +   K  L+   +       S     
Sbjct: 659 RLYQKTSD-DQGQGKAHLLIGNTHYQQGK-YEEARGHYKEALRLYQK------TSDDQGQ 710

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE---EAMARLV 234
            + ++             IG  + ++G+Y  AI  ++  L  Y      +   +A   + 
Sbjct: 711 GKAHLL------------IGNTHYQQGKYEEAIGHYKEALRLYQKTSDDQGQGKAHLLIG 758

Query: 235 EAYVALALMDEAR 247
             +      +EAR
Sbjct: 759 NTHYQQGKYEEAR 771



 Score = 46.3 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 71/189 (37%), Gaps = 30/189 (15%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVAR---KSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
           ++  + +A  ++ +  R +      +   K+ L+     Y  GKY++A    +E +  Y 
Sbjct: 403 QQGKYEEAIGHYKEALRLYQKTSDDQGQGKANLLIGKTHYQQGKYEEAIGHYKEALRLYQ 462

Query: 126 ESKNVDY----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
           ++ + D      + L+G ++ Q  +     +   K  L+   +       S      + +
Sbjct: 463 KTSD-DQGQGKAHLLIGNTHDQQGK-YEEARGHYKEALRLYQK------TSDDQGQGKAH 514

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE---EAMARLVEAYV 238
           +             IG  + ++G+Y  AI  ++  L  Y      +   EA   + + + 
Sbjct: 515 LL------------IGNTHDQQGKYEEAIGHYKEALRLYQKTSDDQGQGEAHLLIGKTHY 562

Query: 239 ALALMDEAR 247
                +EAR
Sbjct: 563 QQGKYEEAR 571



 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 69/190 (36%), Gaps = 22/190 (11%)

Query: 64   AVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARK--SLLMSAFVQYSAGKYQQAASLGEEY 120
                 ++  + +A  +  +  R +   +    +  + L+     Y  GKY++A    +E 
Sbjct: 918  GNTHYQQGKYEEAIGHSKEALRLYQKTSDDQGQGEAHLLIGKTHYQQGKYEEAIGHYKEA 977

Query: 121  ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
            +  Y ++ + D      G ++  +I D+ Y Q   +  + +    +  Y  +        
Sbjct: 978  LRLYQKTSD-DQGQ---GKAHL-LIGDIHYQQGKYEEAIGHYKEALRLYQKT--SDDQGQ 1030

Query: 181  YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE---EAMARLVEAY 237
                         + IG+ +  +G+Y  AI  ++  L  Y      +   +A   + E +
Sbjct: 1031 ---------GEAHLLIGKTHYHQGKYEEAIGHYKEALRLYQKTSDDQGQGKAHLLIGETH 1081

Query: 238  VALALMDEAR 247
                  +EAR
Sbjct: 1082 YQQGKYEEAR 1091



 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 58/168 (34%), Gaps = 28/168 (16%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y++        ++ +A   + + S D        K+ L+        GKY++A    +E 
Sbjct: 562 YQQGKYEEARGHYKEALRLYQKTSDDQGQG----KAHLLIGNTHNQQGKYEEARGHYKEA 617

Query: 121 ITQYPESKN---VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN-SPYVK 176
           +  Y ++ +       + L+G ++ Q        Q   +  + +    +  Y   S    
Sbjct: 618 LRLYQKTSDDQGQGEAHLLIGNTHYQ--------QGKYEEAIGHYKEALRLYQKTSDDQG 669

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
             + ++             IG  + ++G+Y  A   ++  L  Y    
Sbjct: 670 QGKAHLL------------IGNTHYQQGKYEEARGHYKEALRLYQKTS 705



 Score = 40.5 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 77/238 (32%), Gaps = 48/238 (20%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR---KSLLMSAFVQY 105
           +S  +     E+  +   +    N+ +A  +  +  R +      +   K+ L+      
Sbjct: 263 ESGDERDQAEELMGRGRKYYDMDNYEEAIGHSKEALRLYQKTSDDQGQGKAHLLIGTTHD 322

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDY----VYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
             GKY++A    +E +  Y ++ + D      + L+G ++ Q        Q   +  + +
Sbjct: 323 QQGKYEEAIGHYKEALRLYQKTSD-DQGQGKAHLLIGNTHDQ--------QGKYEEAIGH 373

Query: 162 MSRIVERYTNSPYVK---GARFYVTVGRNQLAAKEVEIGRY------YLKR--------- 203
               +  Y  +   +    A   +    +Q    E  IG Y      Y K          
Sbjct: 374 YKEALRLYQKTSDDQGQGKAHLLIGNTHDQQGKYEEAIGHYKEALRLYQKTSDDQGQGKA 433

Query: 204 -----------GEYVAAIPRFQLVLANYSDAEHAE---EAMARLVEAYVALALMDEAR 247
                      G+Y  AI  ++  L  Y      +   +A   +   +      +EAR
Sbjct: 434 NLLIGKTHYQQGKYEEAIGHYKEALRLYQKTSDDQGQGKAHLLIGNTHDQQGKYEEAR 491



 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 70/221 (31%), Gaps = 47/221 (21%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++        ++ +A   + + S D        K+ L+        GKY++A    +E +
Sbjct: 483 QQGKYEEARGHYKEALRLYQKTSDDQGQG----KAHLLIGNTHDQQGKYEEAIGHYKEAL 538

Query: 122 TQYPESKN---VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK-- 176
             Y ++ +       + L+G ++ Q        Q   +    +    +  Y  +   +  
Sbjct: 539 RLYQKTSDDQGQGEAHLLIGKTHYQ--------QGKYEEARGHYKEALRLYQKTSDDQGQ 590

Query: 177 -GARFYVTVGRNQLAAKE--------------------------VEIGRYYLKRGEYVAA 209
             A   +    NQ    E                          + IG  + ++G+Y  A
Sbjct: 591 GKAHLLIGNTHNQQGKYEEARGHYKEALRLYQKTSDDQGQGEAHLLIGNTHYQQGKYEEA 650

Query: 210 IPRFQLVLANYSDAEHAE---EAMARLVEAYVALALMDEAR 247
           I  ++  L  Y      +   +A   +   +      +EAR
Sbjct: 651 IGHYKEALRLYQKTSDDQGQGKAHLLIGNTHYQQGKYEEAR 691


>gi|114776300|ref|ZP_01451345.1| outer membrane protein [Mariprofundus ferrooxydans PV-1]
 gi|114553130|gb|EAU55528.1| outer membrane protein [Mariprofundus ferrooxydans PV-1]
          Length = 285

 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/139 (14%), Positives = 50/139 (35%), Gaps = 8/139 (5%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
            +D+      ++  Y  A L LK   + +A   FN+    +P    + ++       + +
Sbjct: 146 VVDTAAQADAEKNAYTAAYLALKSGRYDEAANGFNKQLDLYPKGEYSDQAWYWLGETRLA 205

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
                +A +  +  +  YP S       + +          +  D +     ++Y  R++
Sbjct: 206 QNDGAKALNAFKYVVDHYPSSVKHAAALFKMA--------QISVDNKQPARAIEYYKRLI 257

Query: 167 ERYTNSPYVKGARFYVTVG 185
           + + +S   + AR  +   
Sbjct: 258 QEHADSDMAEQARAALNAL 276



 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 37/114 (32%), Gaps = 14/114 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                 ++ ++ Y    Y   A +++   R  LA  +          G    A+  F+ V
Sbjct: 174 EAANGFNKQLDLYPKGEYSDQAWYWLGETR--LAQND----------GA--KALNAFKYV 219

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
           + +Y  +     A+ ++ +  V       A E    + + +     A      +
Sbjct: 220 VDHYPSSVKHAAALFKMAQISVDNKQPARAIEYYKRLIQEHADSDMAEQARAAL 273


>gi|149598974|ref|XP_001516420.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
          Length = 823

 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/240 (12%), Positives = 76/240 (31%), Gaps = 38/240 (15%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLL 98
            Q++    L   +D      +  K        ++ KA E++      D   +     +L 
Sbjct: 468 TQANNYADLAVSSDRYNPSALTNKGNTIFASGDYEKAAEFYKEALRND---SSCTE-ALY 523

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
                     +  +A      ++  +   +N   V Y +  +  +++ D           
Sbjct: 524 NIGLTYKKLNRLDEALDC---FLKLHAILRNSAQVLYQIA-NLYEIMEDPN-------QA 572

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA-IPRFQLVL 217
           ++++ +++           A   +    +    K  +  +YY +   Y+ + I   + + 
Sbjct: 573 IEWLMQLISVVPTD---ARALAKLGELYDNEGDKS-QAFQYYYESYRYLPSNIEVIEWLG 628

Query: 218 ANYSDAEHAEEAMARLVEA-----------------YVALALMDEAREVVSLIQERYPQG 260
           A Y D +  E+A+     A                 Y       +A +    I +++P+ 
Sbjct: 629 AYYIDTQFCEKAIQYFERAALIRPTQVKWQLMVASCYRRSGNYQKALDTYKEIHKKFPEN 688


>gi|158521065|ref|YP_001528935.1| response regulator receiver protein [Desulfococcus oleovorans Hxd3]
 gi|158509891|gb|ABW66858.1| response regulator receiver protein [Desulfococcus oleovorans Hxd3]
          Length = 814

 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 56/153 (36%), Gaps = 25/153 (16%)

Query: 106 SAGKYQQAASLGEEYITQYPESKN--------VDYVYYLVGMSY---AQMIRDVPYDQRA 154
            AG  ++  +  + YIT +P+S          +D    +   ++    Q   D+  D   
Sbjct: 354 KAGALEKKLAALDAYITTHPDSPYKSAAEKQKLDVAREMEIQAFDATLQKTSDLSIDDAF 413

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK-----RGEYVAA 209
            +  L   +  +++Y  S Y +  +  +      +   E      Y K     + ++ A 
Sbjct: 414 EEKALALYNDFLDKYPESVYAEEIQKRMADIPAIMKDAE------YGKLQQIPKNDFSAR 467

Query: 210 IPRFQLVLANYS---DAEHAEEAMARLVEAYVA 239
           I  ++  +  Y    + ++    ++ L E + A
Sbjct: 468 IAAYKAYIEAYPRGENTQNVRRMLSDLGEDFYA 500


>gi|110637942|ref|YP_678149.1| TPR repeat-containing protein [Cytophaga hutchinsonii ATCC 33406]
 gi|110280623|gb|ABG58809.1| conserved hypothetical protein, with TPR repeat [Cytophaga
           hutchinsonii ATCC 33406]
          Length = 1012

 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 66/214 (30%), Gaps = 42/214 (19%)

Query: 71  QNFSKAYEYFNQC-----SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
           + + +A   F +       +        R + L  A + +   ++ +A    +       
Sbjct: 519 KKWDEAIPQFVKFITIQAEKKGKGDIYYRDAELRLADLYFVTRRFPEAIKYYD--FALAE 576

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            +++ DY+ +          +        T       +++  +Y NS Y   A       
Sbjct: 577 RNEDEDYILFQKATINYLTNK--------TSQAYSMYAQLTNKYPNSAYYDQALMQRCQL 628

Query: 186 RNQLAAKEVEIGRY------------------------YLKRGEYVAAIPRFQLVLANYS 221
             + +  EV I  Y                        Y    +Y  AI   + ++  Y 
Sbjct: 629 DLEASKYEVAIEGYNKIINKKEDLNGLKPIALQKRAISYFNLKDYNKAIADNKRIVYEYP 688

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
            +  A  A+  + E    L + D++ E   ++ +
Sbjct: 689 KSAPAYSALLSIQE---MLGIQDKSEEFAPILAK 719



 Score = 46.3 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/235 (14%), Positives = 75/235 (31%), Gaps = 42/235 (17%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +++KA +       S+AY  + Q +  +P +    ++L+    +   A KY+ A     +
Sbjct: 585 LFQKATINYLTNKTSQAYSMYAQLTNKYPNSAYYDQALMQRCQLDLEASKYEVAIEGYNK 644

Query: 120 YITQYPESKNV----DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
            I    + +++            +SY  +        +     +    RIV  Y  S   
Sbjct: 645 IIN---KKEDLNGLKPIALQKRAISYFNL--------KDYNKAIADNKRIVYEYPKSAPA 693

Query: 176 KGA---RFYVTVGRNQ-------LAAK-------------EVEIGRYYLKRGEYVAAIPR 212
             A      +   +++       LA               E    +      +Y  AI  
Sbjct: 694 YSALLSIQEMLGIQDKSEEFAPILAKYKELNPSDQDLKEVEFRSAQSLYSSQKYPQAITG 753

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR-EVVSLIQERYPQGYWARYV 266
           F   +  Y    +  EA   L ++Y        A+   + ++ E   +  + +  
Sbjct: 754 FAAFIRQYPTHPNVSEAQYYLADSYFRTKDYSNAKATYIEILAE---KNQYYKKS 805



 Score = 42.4 bits (99), Expect = 0.075,   Method: Composition-based stats.
 Identities = 10/68 (14%), Positives = 21/68 (30%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           + +D   +   +  A      Q + +A   F    R +P      ++    A   +    
Sbjct: 724 NPSDQDLKEVEFRSAQSLYSSQKYPQAITGFAAFIRQYPTHPNVSEAQYYLADSYFRTKD 783

Query: 110 YQQAASLG 117
           Y  A +  
Sbjct: 784 YSNAKATY 791



 Score = 40.9 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 23/138 (16%), Positives = 46/138 (33%), Gaps = 37/138 (26%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS-- 100
           ++ +      +      + ++A+ +   ++++KA     +   ++P +  A  +LL    
Sbjct: 643 NKIINKKEDLNGLKPIALQKRAISYFNLKDYNKAIADNKRIVYEYPKSAPAYSALLSIQE 702

Query: 101 -----------------------------------AFVQYSAGKYQQAASLGEEYITQYP 125
                                              A   YS+ KY QA +    +I QYP
Sbjct: 703 MLGIQDKSEEFAPILAKYKELNPSDQDLKEVEFRSAQSLYSSQKYPQAITGFAAFIRQYP 762

Query: 126 ESKNVDYVYYLVGMSYAQ 143
              NV    Y +  SY +
Sbjct: 763 THPNVSEAQYYLADSYFR 780



 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 75/213 (35%), Gaps = 27/213 (12%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A ++ ++  + +   Y  +   D           L+ A   +   +Y +A  L ++Y+T 
Sbjct: 215 ANIYYRQAKYDELIPYAEKVIADKSAGPNTNDVKLILADAYFFKQEYAKATPLFKDYLTA 274

Query: 124 YPESKNVDYVYYLVGMSYA---------QMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
                    + Y +G S            M++ +  D+ +      Y+  +        Y
Sbjct: 275 TGTKSLTPDMKYRIGFSSYKAADYKQAVDMLQAIATDKDSLGQSSAYILGL-------SY 327

Query: 175 VKGARFYVTVGRNQLAAKEVEIGR-------YYLKR----GEYVAAIPRFQLVLANYSDA 223
           +K       +   +LA + V            Y K     G +  A PR +  +  Y  +
Sbjct: 328 LKSENKNAALISFELAQRSVFSAVINEEAMFLYAKITSDLGRFTEATPRLKNFIEKYPKS 387

Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            H +EA   L E+++     DEA   +  ++ +
Sbjct: 388 YHMQEAYELLSESFLGSRNYDEALVYIENLKHQ 420


>gi|154291778|ref|XP_001546469.1| hypothetical protein BC1G_15048 [Botryotinia fuckeliana B05.10]
 gi|150846627|gb|EDN21820.1| hypothetical protein BC1G_15048 [Botryotinia fuckeliana B05.10]
          Length = 469

 Score = 51.3 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/148 (10%), Positives = 41/148 (27%), Gaps = 23/148 (15%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSA 107
            +       +  +        ++  A + + +        P    + ++          +
Sbjct: 2   PSREEEAVALKNEGNKAFAAHDWLGAIDLYTKAIELDDQKP-TYYSNRAQ-----ANIKS 55

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
             Y  A +   + I       N    YY   ++Y  +++         K  L+    +V+
Sbjct: 56  EAYGYAIADATKAIEL---DPNFGKAYYRRAVAYTAILK--------PKEALKDFKAVVK 104

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           +  N      A+  +      +   E  
Sbjct: 105 KAPNDK---DAKLKLAECEKIVKRIEFF 129


>gi|119475629|ref|ZP_01615982.1| Tetratricopeptide TPR_4 [marine gamma proteobacterium HTCC2143]
 gi|119451832|gb|EAW33065.1| Tetratricopeptide TPR_4 [marine gamma proteobacterium HTCC2143]
          Length = 280

 Score = 51.3 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 19/103 (18%)

Query: 159 LQYMSRIVERYT--NSPYVKGARFYVTVGRNQLAAKEVEIGR--------------YYLK 202
           L+ ++ ++ +     S Y++ A  Y   G   LA K+ E  +              YY K
Sbjct: 35  LEQLNAVITQQPSLQSAYIQRAALYTRTGNYPLAEKDFEAAQTLGDLYLVSHELGAYYFK 94

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
             +YVAA+ +F   L +Y +  H    +    EAY  +    +
Sbjct: 95  IKKYVAAVNQFTNYLEHYPN--HYP-TLEYRAEAYREIGKTQK 134



 Score = 40.5 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 45/160 (28%), Gaps = 40/160 (25%)

Query: 28  FSIAVCFLVGWERQS--------SRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYE 78
            S+AV  L+     +          +     +T     +  Y ++A L+ +  N+  A +
Sbjct: 11  ISLAVISLLCCAGHAFSHPGDEHKLEQLNAVITQQPSLQSAYIQRAALYTRTGNYPLAEK 70

Query: 79  YFNQCSRD-------FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES-KNV 130
            F                               +   KY  A +    Y+  YP     +
Sbjct: 71  DFEAAQTLGDLYLVSHELGAY-----------YFKIKKYVAAVNQFTNYLEHYPNHYPTL 119

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           +Y       +Y         +   T+  L+  S  +E   
Sbjct: 120 EY----RAEAY--------REIGKTQKSLEDFSHFLETSP 147


>gi|328701579|ref|XP_001951487.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog isoform 1
           [Acyrthosiphon pisum]
          Length = 1177

 Score = 51.3 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/276 (15%), Positives = 104/276 (37%), Gaps = 37/276 (13%)

Query: 1   MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
           +   L  +  + EA        A+T  F++A  F    + Q +   Y D + +     + 
Sbjct: 473 LEESLSLSKKMVEADPQYYNSIAVTTTFNLARIFEAQCQFQKAETFYKDILKEHPNYIDC 532

Query: 61  YEK-AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           Y +   +        +A ++F +      + P    +    L  A +++  G+       
Sbjct: 533 YLRLGCMARDRNQIYEASDWFKEALRIDNEHP-DAWSLLGNLHLAKMEWGPGQ------- 584

Query: 117 GEEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPYDQ----RATKLMLQYMSRIVERYT 170
            +++      P + N  Y    +G  + Q +     ++    R   L LQ+ +++++   
Sbjct: 585 -KKFERVLKNPSTLNDSYSLIALGNVWLQTLHQPTRNKEQEKRHQDLALQFFTKVLKNDP 643

Query: 171 NSPYVKGA-------RFYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRF 213
            + +           + Y+   R+  A  +E         + I   Y+++ +Y++AI  +
Sbjct: 644 KNIWAANGIGCVMAHKQYINEARDIFAQVREATADFCDVWLNIAHIYIEQKQYISAIQMY 703

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           +  +  +   ++  E +  L  AY     + EA++V
Sbjct: 704 ENCIKKFFKHDNV-EILQYLGRAYFKAGKLKEAKKV 738


>gi|197123793|ref|YP_002135744.1| hypothetical protein AnaeK_3402 [Anaeromyxobacter sp. K]
 gi|196173642|gb|ACG74615.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp. K]
          Length = 1192

 Score = 51.3 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 56/143 (39%), Gaps = 29/143 (20%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           +QA +L +  I++YP    +D V Y +G + ++  R+ P         L+    +++++ 
Sbjct: 160 EQAVALYKAIISRYPSYPRLDEVLYFLGENLSRRDRNDP-------DALKAYRALIQKFP 212

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR-------GEYVAAIPRFQLVLANYSDA 223
           +S YV  A               +  G YY +R       G    A+  ++     Y ++
Sbjct: 213 SSRYVPDAW--------------MAFGEYYFERANKNDRNGNLRKALESYRKAAE-YQES 257

Query: 224 EHAEEAMARLVEAYVALALMDEA 246
                A+ +    +  L    EA
Sbjct: 258 SVYGYALYKQGWVHYNLGNWSEA 280



 Score = 39.7 bits (92), Expect = 0.43,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 29/74 (39%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D  T        Y  +V +++     +A E   Q  + +P   +A KSL  +A    +  
Sbjct: 703 DWPTSRLAPTAYYNASVDYVRAHRLDRAMEIREQFLQRYPTHTLAPKSLYDNAEAYEAVA 762

Query: 109 KYQQAASLGEEYIT 122
            + +AA   E Y  
Sbjct: 763 DFGRAADHYERYFQ 776



 Score = 35.9 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 69/208 (33%), Gaps = 29/208 (13%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
                ++    Y+ A L  +   F +A + F + + D P   +A  S  +        G 
Sbjct: 582 QPRGEKWVEVAYKLANLHYRHNAFGEASDLFTRIALDHPQHELAGYSANLVLDAYNLLGD 641

Query: 110 YQQAASLGEEY------ITQYPESKN-VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
           ++      + +      I  +P+ K+ +  V      S  ++I +    Q       QY+
Sbjct: 642 WRNVNGWAKRFYDNRALIAAHPQLKDDLSRVIEQ---SAFKVIEEKEKAQDFVGAAEQYL 698

Query: 163 SRIVERYTNSPYVKGA--RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
           +     +  S     A     V   R     + +EI      R ++          L  Y
Sbjct: 699 A-FARDWPTSRLAPTAYYNASVDYVRAHRLDRAMEI------REQF----------LQRY 741

Query: 221 SDAEHAEEAMARLVEAYVALALMDEARE 248
                A +++    EAY A+A    A +
Sbjct: 742 PTHTLAPKSLYDNAEAYEAVADFGRAAD 769


>gi|188584570|ref|YP_001928015.1| tol-pal system protein YbgF [Methylobacterium populi BJ001]
 gi|179348068|gb|ACB83480.1| tol-pal system protein YbgF [Methylobacterium populi BJ001]
          Length = 339

 Score = 51.3 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 34/88 (38%), Gaps = 8/88 (9%)

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           ++   +A+      +Y+QA     ++I  +P  + V    + +G SY Q  R        
Sbjct: 214 QADFEAAYALIRERQYEQAEMSLRQFIQSHPRDRLVPKATFWLGESYLQRNRS------- 266

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYV 182
            +   +   ++   + NSP    A   +
Sbjct: 267 -REAAEQFLKVSTDFANSPVAPEAMLKL 293



 Score = 45.1 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 44/107 (41%), Gaps = 14/107 (13%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           R  +     + + ++ +     V  A F++              G  YL+R     A  +
Sbjct: 227 RQYEQAEMSLRQFIQSHPRDRLVPKATFWL--------------GESYLQRNRSREAAEQ 272

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           F  V  +++++  A EAM +L  +  AL    +A   ++ ++ ++P 
Sbjct: 273 FLKVSTDFANSPVAPEAMLKLGASLHALGAKAQACATLAEVERKFPS 319


>gi|154249690|ref|YP_001410515.1| TPR repeat-containing protein [Fervidobacterium nodosum Rt17-B1]
 gi|154153626|gb|ABS60858.1| Tetratricopeptide TPR_2 repeat protein [Fervidobacterium nodosum
           Rt17-B1]
          Length = 359

 Score = 51.3 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/215 (20%), Positives = 86/215 (40%), Gaps = 22/215 (10%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
             L L+E +   A +Y N+     P      +S  M     Y+ G Y++A    E+ I  
Sbjct: 139 GSLLLEEGDIEGAIKYLNRSIELDP---WLIQSYSMIGEAYYNIGNYEKAVEYWEKEIAI 195

Query: 124 YPESKNVDYVYYLVGMSYA------QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
            P +      Y+++  +Y       + I  +   +  ++  +  +  + E Y      + 
Sbjct: 196 SPSNTFT---YFMISDAYTKIGKLEKAIEILEKYREESENSIIALYELAELYRKKGNEEK 252

Query: 178 ARFYVTVGRNQLAAKE---VEI-GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
           A+ Y ++       K+   +EI  + +LK+G Y   I   +  +    +A+H       L
Sbjct: 253 AKEYESLIMEIDPQKDPNGIEIWAKVHLKKGNYDKVISVIENAIKANPEAKHLN---LVL 309

Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
             AYV    +++AR VV  +++     +W  Y + 
Sbjct: 310 AVAYVKTNQIEKARRVVEELKD---DNFWYLYGKR 341


>gi|281412533|ref|YP_003346612.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga naphthophila
           RKU-10]
 gi|281373636|gb|ADA67198.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga naphthophila
           RKU-10]
          Length = 357

 Score = 51.3 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/241 (17%), Positives = 87/241 (36%), Gaps = 45/241 (18%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           LD   +     E+  K  L +++    +  +Y ++     P      ++        Y+ 
Sbjct: 124 LDIDENYAPAYEL--KGSLLVEQGKIEEGIKYLDKAVEIDP---WLVQAYASLGEAHYNL 178

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           G Y++A    E  +   P  K     Y+++  +Y ++ R          L  + + R+++
Sbjct: 179 GDYEKAIHYWERELEYNPNDKIT---YFMITEAYHEINRK--------DLAAKTLERLLK 227

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAK-------------------EVEI-GRYYLKRGEYV 207
              ++     A + ++     L  +                   E+E   R  LK G Y 
Sbjct: 228 IDPDNI---PALYQLSQLYRDLGNEEKAKEMEEKIMNCKPKYPTELEPWARVMLKHGRYK 284

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
             +   + ++ +   +     A   LV  YV L  +D+ARE++  I +     +W  Y +
Sbjct: 285 EVVEELEKIVES---SPLNTLARLLLVVPYVKLGQIDKAREILEDIGQN---NFWYYYGK 338

Query: 268 T 268
            
Sbjct: 339 K 339


>gi|171692783|ref|XP_001911316.1| hypothetical protein [Podospora anserina S mat+]
 gi|170946340|emb|CAP73141.1| unnamed protein product [Podospora anserina S mat+]
          Length = 496

 Score = 51.3 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/171 (12%), Positives = 54/171 (31%), Gaps = 30/171 (17%)

Query: 38  WERQSSRDVYLDSVTDVRYQRE---VYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAG 91
           W R++  +   + V     + +   +  +        ++  A ++++   + +   P   
Sbjct: 4   WSRKAQPEPEKEDVEMATPEEQAVALKNQGNKAFAAHDWPTAIDFYSQAIELNDKEP-TF 62

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
            + ++             Y  A     + I   P        YY    +Y  +++     
Sbjct: 63  WSNRAQ-----AYMKTEAYGYAIRDATKAIELNPGMIK---AYYRRATAYVAILK----- 109

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN---QLAAKE-VEIGR 198
               K  ++     V+    +     A+  +   +    QLA  E +E+G 
Sbjct: 110 ---PKEAVKDFQTCVKIDPGNK---DAKLKLVECQKAVRQLAFFEAIEVGD 154


>gi|119488444|ref|ZP_01621617.1| Lytic transglycosylase, catalytic [Lyngbya sp. PCC 8106]
 gi|119455255|gb|EAW36395.1| Lytic transglycosylase, catalytic [Lyngbya sp. PCC 8106]
          Length = 726

 Score = 51.3 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 80/231 (34%), Gaps = 25/231 (10%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           D+   S       R  Y  A  F+++   S+A    +   +++P   +A   LL  A   
Sbjct: 68  DIAETSKPSTDRSRARYLLASDFIQQNQPSEAIGLLDGLEKEYPL--LASHILLKRAQAY 125

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY----AQMIRDVPYDQRATKLMLQ 160
              G    A    E  +  YP+   V    +++G        Q I D P   R  ++   
Sbjct: 126 EQMGDTANAKQTWEALVKGYPKDPVVAEALFVLGKENPEYWDQAIADFPAHPRTVEIAET 185

Query: 161 YMSRIVERYT-------NSPYVKGARFYVTVGR----NQLAAKEVEIGRY-YLKRGEYVA 208
            +     +         +  Y+K    Y+   R    +QL  ++ E   + Y ++ +Y  
Sbjct: 186 RLKENPNQLPLLLIIARHGIYLKDYGTYLEKLRLNYASQLTPEDWEAMAFGYWEKQDYG- 244

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
                +  LA Y+ A      + R          + E+R+    + + +P 
Sbjct: 245 -----KGALA-YAKAPRTPRNLYRHARGLWLEGKIPESRQAYEQLIQAFPD 289



 Score = 39.3 bits (91), Expect = 0.57,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 76/231 (32%), Gaps = 33/231 (14%)

Query: 38  WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC-----SRDFPFAGV 92
           WE+Q      L      R  R +Y  A     E    ++ + + Q       +  P    
Sbjct: 238 WEKQDYGKGALAYAKAPRTPRNLYRHARGLWLEGKIPESRQAYEQLIQAFPDQTDPGGED 297

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           A   L+  +         + A    ++ I ++P  +      Y       Q++  +   Q
Sbjct: 298 AGFGLIRLS----RLSDRKDAVKYLDQAIAKFPFHR--PEALYDKA----QLLDKLQSKQ 347

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
                  Q    ++ +++ S     A+    + ++            + K G+   A   
Sbjct: 348 S----ASQARQMLLSQHSESE--PAAQLRWKISQD------------FAKAGKIKEASKW 389

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
            + +     D+E A EA   + +    +    EA++    +  RYP  Y+A
Sbjct: 390 AKELSTQNPDSELAPEATFWIGKWAQQIGNSAEAKKAFEYLLARYPDSYYA 440


>gi|92113978|ref|YP_573906.1| tetratricopeptide TPR_2 [Chromohalobacter salexigens DSM 3043]
 gi|91797068|gb|ABE59207.1| Tetratricopeptide TPR_2 [Chromohalobacter salexigens DSM 3043]
          Length = 254

 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 45/118 (38%), Gaps = 14/118 (11%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           R     ++     +  Y NS     A +++    +  A  +++            AA   
Sbjct: 146 REFDAAIKAFEDFIGDYPNSSLRANAHYWLGELYS--AQSQLD------------AAAKS 191

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
           FQ V+ ++ ++    +A+ +L          DE+R ++  ++  YP+   A   E  +
Sbjct: 192 FQTVIDDFPESNKMPDALYKLGLLKARQGHPDESRSLLDRVRNDYPESNAASMAEDFL 249



 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 44/129 (34%), Gaps = 22/129 (17%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA--- 114
           R+ Y+ A   ++ + F  A + F     D+P + +        A   Y  G+   A    
Sbjct: 133 RDAYQAAFQKVQAREFDAAIKAFEDFIGDYPNSSL-------RANAHYWLGELYSAQSQL 185

Query: 115 -SLGEEY---ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
            +  + +   I  +PES  +    Y +G+  A+        Q         + R+   Y 
Sbjct: 186 DAAAKSFQTVIDDFPESNKMPDALYKLGLLKAR--------QGHPDESRSLLDRVRNDYP 237

Query: 171 NSPYVKGAR 179
            S     A 
Sbjct: 238 ESNAASMAE 246



 Score = 43.6 bits (102), Expect = 0.033,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 31/83 (37%), Gaps = 8/83 (9%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
            A ++  A    E++I  YP S      +Y +G  Y+         Q       +    +
Sbjct: 144 QAREFDAAIKAFEDFIGDYPNSSLRANAHYWLGELYSA--------QSQLDAAAKSFQTV 195

Query: 166 VERYTNSPYVKGARFYVTVGRNQ 188
           ++ +  S  +  A + + + + +
Sbjct: 196 IDDFPESNKMPDALYKLGLLKAR 218


>gi|153006229|ref|YP_001380554.1| hypothetical protein Anae109_3386 [Anaeromyxobacter sp. Fw109-5]
 gi|152029802|gb|ABS27570.1| TPR repeat-containing protein [Anaeromyxobacter sp. Fw109-5]
          Length = 1162

 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 53/141 (37%), Gaps = 29/141 (20%)

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           QA +L +  I +YP+   +D V Y +  + +Q  R   +D       L+    ++ERY +
Sbjct: 160 QAVALYKAIIAKYPKYPRLDEVLYFLAENLSQRDR---FDP----EALKAYRALIERYPS 212

Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYL-------KRGEYVAAIPRFQLVLANYSDAE 224
           S YV  A               +  G YY        + G    A+  ++     Y ++ 
Sbjct: 213 SRYVPDAW--------------MAFGEYYFEKANKSDRTGNLTKALDAYKKAAE-YQESS 257

Query: 225 HAEEAMARLVEAYVALALMDE 245
               A+ +    +  L   D+
Sbjct: 258 VYAYALYKQAWVHYNLGAYDQ 278



 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 28/74 (37%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D          +Y  +V + +     +A E   Q    +P   +A KSL  +A    +  
Sbjct: 697 DWPQSRLAPTALYNASVDYGRAHRLDRAMEVREQFLARYPGHELAPKSLYDNAEAFEAIA 756

Query: 109 KYQQAASLGEEYIT 122
            + +AA L E Y  
Sbjct: 757 DFSRAADLYERYFR 770



 Score = 37.0 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 39/101 (38%), Gaps = 15/101 (14%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           K +++  A E +   SRD+P + +A  +L  ++     A +  +A  + E+++ +YP  +
Sbjct: 680 KARDYEAAAEEYIAFSRDWPQSRLAPTALYNASVDYGRAHRLDRAMEVREQFLARYPGHE 739

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
                 Y               D       +   SR  + Y
Sbjct: 740 LAPKSLY---------------DNAEAFEAIADFSRAADLY 765


>gi|209550774|ref|YP_002282691.1| tol-pal system protein YbgF [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209536530|gb|ACI56465.1| tol-pal system protein YbgF [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 329

 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 56/163 (34%), Gaps = 16/163 (9%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
           A   +      ++          +  + + Y+ A   +   ++S A + F Q    +P +
Sbjct: 179 ANAGVGSGPIPNANPGAPQQTASLGGEADQYKSAYGHVLSGDYSTAEQEFTQYITRYPSS 238

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP---ESKNVDYVYYLVGMSYAQMIRD 147
             A  +        YS GKY +A    + ++  +     S+    +   +GMS A +   
Sbjct: 239 ARAADANFWLGEALYSQGKYNEA---AKTFLNAHQKYATSEKAPEMLLKLGMSLAALDN- 294

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
                  T+     +  + +RY  +         V   + +LA
Sbjct: 295 -------TETACATLREVSKRYPKASRA--VISKVASEQKRLA 328



 Score = 49.0 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 39/104 (37%), Gaps = 14/104 (13%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
             Q  ++ + RY +S     A F++                    +G+Y  A   F    
Sbjct: 224 AEQEFTQYITRYPSSARAADANFWLGEAL--------------YSQGKYNEAAKTFLNAH 269

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             Y+ +E A E + +L  +  AL   + A   +  + +RYP+  
Sbjct: 270 QKYATSEKAPEMLLKLGMSLAALDNTETACATLREVSKRYPKAS 313


>gi|163787843|ref|ZP_02182290.1| hypothetical protein FBALC1_04852 [Flavobacteriales bacterium
           ALC-1]
 gi|159877731|gb|EDP71788.1| hypothetical protein FBALC1_04852 [Flavobacteriales bacterium
           ALC-1]
          Length = 1007

 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 91/245 (37%), Gaps = 48/245 (19%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                    +YE A  ++K  +  KA + +++ + ++  +    K+LL    V Y++ + 
Sbjct: 605 PKSALRDDAMYELANSYVKSNDTDKAMQMYDRLNSEYRRSAFTSKALLRQGLVYYNSNEN 664

Query: 111 QQAASLGEEYITQYPESKNV------------------DYVYYLVGMSYAQMIRDVPYDQ 152
           ++A S  ++    +P S                     +Y  ++  + Y + + DV  D 
Sbjct: 665 ERALSKFKKVAKDFPASGEAVQAVSTARLIYIDLGRVDEYARWVKSLDYVE-VTDVELDN 723

Query: 153 R------------ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
                         T   ++  ++ + ++ N  +   +                 + + Y
Sbjct: 724 TMYLAAEKPYLDNDTDKAIRQFNKYLNQFPNGIHALKS--------------HFYLAQMY 769

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI--QERYP 258
            K+  +  A P ++ V+   S +E+ E+A  RL E Y+  +    A  V+  +  +  YP
Sbjct: 770 YKKDLFDNAQPHYKYVVDA-SKSEYTEQATVRLCEIYLTNSNWSRAIPVLKRLESEADYP 828

Query: 259 QGYWA 263
           Q    
Sbjct: 829 QNVLY 833



 Score = 42.0 bits (98), Expect = 0.088,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 59/189 (31%), Gaps = 27/189 (14%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              +   Q +++A  Y                      +  Y    ++ A S   + I  
Sbjct: 251 GESYFNLQKYAEAIPYLKAYKGKR--GKWNNTDYYQLGYAYYKQNDFEAAISEFNKIID- 307

Query: 124 YPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
              + +V    YY +G SY  + +         +  L       +    +   + A  ++
Sbjct: 308 --GNNSVAQNAYYHLGESYINLDKK--------QEALNAFRNASQMDYEAQIQEDA--WL 355

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
                  A    EIG  Y    + +A        L  Y +  + EE    L+++Y+    
Sbjct: 356 NY-----AKISYEIGNPYQSVPQVLA------GYLDKYPETSYKEEIETLLIDSYITSKN 404

Query: 243 MDEAREVVS 251
             EA E++ 
Sbjct: 405 YKEAIELLK 413



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 31/235 (13%), Positives = 68/235 (28%), Gaps = 34/235 (14%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD---FPFAGVARK 95
            +  S     D    +      Y    + +      K+    ++       +P + +   
Sbjct: 553 SKYQSAISAYDKAIQINEIETDYASFQVAMSHGYLGKSSTKTSELKTFIEGYPKSALRDD 612

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           ++   A     +    +A  + +   ++Y  S          G+ Y     +        
Sbjct: 613 AMYELANSYVKSNDTDKAMQMYDRLNSEYRRSAFTSKALLRQGLVYYNSNEN-------- 664

Query: 156 KLMLQYMSRIVERYTNSPYVKGA--RFYVTVG----RNQLAA-----KEVEIGRYYLKRG 204
           +  L    ++ + +  S     A     +        ++ A        VE+    L   
Sbjct: 665 ERALSKFKKVAKDFPASGEAVQAVSTARLIYIDLGRVDEYARWVKSLDYVEVTDVELDNT 724

Query: 205 EYVA------------AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
            Y+A            AI +F   L  + +  HA ++   L + Y    L D A+
Sbjct: 725 MYLAAEKPYLDNDTDKAIRQFNKYLNQFPNGIHALKSHFYLAQMYYKKDLFDNAQ 779



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 71/200 (35%), Gaps = 35/200 (17%)

Query: 67  FLKEQNFSKAYEYFNQCSRD--FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
           +L   N+S+A     +   +  +P   +  +S LM+A+  Y    Y +A +  E      
Sbjct: 805 YLTNSNWSRAIPVLKRLESEADYPQNVLYAQSNLMNAY--YQTQDYNEAEAYAE------ 856

Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRA--TKLMLQYMSRIVERYTNSPYVKGARFYV 182
                         +S +++ + +  D +    +  ++  +            K A   V
Sbjct: 857 ------------KVLSTSKLDKKIKSDAKIIIARSAIKTGNE--------DKAKDAYADV 896

Query: 183 TVGR--NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA-EEAMARLVEAYVA 239
                 +  A      G +  K G Y A+    Q +  +YS  ++   + +  + + + A
Sbjct: 897 EKIATGSVAAEALFYNGYFKNKEGRYKASNTTIQKLAKDYSSYKYYSAKGLVVMAKNFYA 956

Query: 240 LALMDEAREVVSLIQERYPQ 259
           L    +A  ++  +   +P 
Sbjct: 957 LGDAFQATYILESVISNFPD 976



 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 64/206 (31%), Gaps = 25/206 (12%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM--SAFVQYSAGKYQQAASLGEEY 120
           KA       N++ A   F Q +     + +  +  L     +  +    Y  A+   +++
Sbjct: 468 KAETEYNLSNYNDALIGFKQFNGLAESSDLPERDNLDYNLGYTYFKLKDYSNASKYFQKF 527

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           I +    +       L        + D  +     +  +    + ++             
Sbjct: 528 IDKNSSDR-------LRRNDAYLRVADGHFVSSKYQSAISAYDKAIQ------------- 567

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
            +       A+ +V +   YL  G+        +  +  Y  +   ++AM  L  +YV  
Sbjct: 568 -INEIETDYASFQVAMSHGYL--GKSSTKTSELKTFIEGYPKSALRDDAMYELANSYVKS 624

Query: 241 ALMDEAREVVSLIQERYPQGYWARYV 266
              D+A ++   +   Y +  +    
Sbjct: 625 NDTDKAMQMYDRLNSEYRRSAFTSKA 650



 Score = 36.6 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 27/75 (36%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           + +    VTDV     +Y  A     + +  KA   FN+    FP    A KS    A +
Sbjct: 709 KSLDYVEVTDVELDNTMYLAAEKPYLDNDTDKAIRQFNKYLNQFPNGIHALKSHFYLAQM 768

Query: 104 QYSAGKYQQAASLGE 118
            Y    +  A    +
Sbjct: 769 YYKKDLFDNAQPHYK 783


>gi|162450458|ref|YP_001612825.1| hypothetical protein sce2186 [Sorangium cellulosum 'So ce 56']
 gi|161161040|emb|CAN92345.1| hypothetical protein predicted by Glimmer/Critica [Sorangium
           cellulosum 'So ce 56']
          Length = 413

 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 29/80 (36%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
                  +  + E+ + A+   +     +A E  +     +P + +A  + +        
Sbjct: 316 QAPPRASLTAENELLQGAMAARRRGQPRRAIERLDLLLGRYPDSPLAEIARVERLRAIEM 375

Query: 107 AGKYQQAASLGEEYITQYPE 126
            G  ++ A+    Y+  YP+
Sbjct: 376 LGDKERTAAEARRYLKDYPQ 395



 Score = 38.6 bits (89), Expect = 0.90,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 29/75 (38%), Gaps = 7/75 (9%)

Query: 190 AAKEV----EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
           A  E+       R   +RG+   AI R  L+L  Y D+  AE A    + A   L   + 
Sbjct: 325 AENELLQGAMAAR---RRGQPRRAIERLDLLLGRYPDSPLAEIARVERLRAIEMLGDKER 381

Query: 246 AREVVSLIQERYPQG 260
                    + YPQG
Sbjct: 382 TAAEARRYLKDYPQG 396


>gi|93279690|pdb|2FO7|A Chain A, Crystal Structure Of An 8 Repeat Consensus Tpr Superhelix
           (Trigonal Crystal Form)
 gi|168177007|pdb|2HYZ|A Chain A, Crystal Structure Of An 8 Repeat Consensus Tpr Superhelix
           (Orthorombic Crystal Form)
          Length = 136

 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 55/163 (33%), Gaps = 31/163 (19%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y     + K+ ++ +A EY+ +     P +    ++        Y  G Y +A    ++ 
Sbjct: 5   YNLGNAYYKQGDYDEAIEYYQKALELDPRSA---EAWYNLGNAYYKQGDYDEAIEYYQKA 61

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +   P S      +Y +G +Y +        Q      ++Y  + +E    S        
Sbjct: 62  LELDPRS---AEAWYNLGNAYYK--------QGDYDEAIEYYQKALELDPRSAEAW---- 106

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
                          +G  Y K+G+Y  AI  +Q  L     +
Sbjct: 107 -------------YNLGNAYYKQGDYDEAIEYYQKALELDPRS 136



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 43/120 (35%), Gaps = 14/120 (11%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D R     Y     + K+ ++ +A EY+ +     P +    ++        Y  G Y +
Sbjct: 31  DPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSA---EAWYNLGNAYYKQGDYDE 87

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A    ++ +   P S      +Y +G +Y +        Q      ++Y  + +E    S
Sbjct: 88  AIEYYQKALELDPRS---AEAWYNLGNAYYK--------QGDYDEAIEYYQKALELDPRS 136



 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 48/151 (31%), Gaps = 31/151 (20%)

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
                 Y  G Y +A    ++ +   P S      +Y +G +Y +        Q      
Sbjct: 6   NLGNAYYKQGDYDEAIEYYQKALELDPRS---AEAWYNLGNAYYK--------QGDYDEA 54

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
           ++Y  + +E    S                       +G  Y K+G+Y  AI  +Q  L 
Sbjct: 55  IEYYQKALELDPRSAEAW-----------------YNLGNAYYKQGDYDEAIEYYQKALE 97

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREV 249
               +    EA   L  AY      DEA E 
Sbjct: 98  LDPRS---AEAWYNLGNAYYKQGDYDEAIEY 125


>gi|317153422|ref|YP_004121470.1| tol-pal system protein YbgF [Desulfovibrio aespoeensis Aspo-2]
 gi|316943673|gb|ADU62724.1| tol-pal system protein YbgF [Desulfovibrio aespoeensis Aspo-2]
          Length = 300

 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 47/142 (33%), Gaps = 22/142 (15%)

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           K+L   A+  Y   ++++A S   E+   +          +  G  Y ++ +D       
Sbjct: 180 KALYDKAYALYKEDQFEKARSYWAEFTDTFKSHSFAPSAVFWQGQCYFKL-KDYSR---- 234

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
               +     ++E+Y  S   K A        + L   E+              A  R  
Sbjct: 235 ---AVILFEDVIEKYAKSAKYKAALLRAGYSWDYLGKPEL--------------AKMRMA 277

Query: 215 LVLANYSDAEHAEEAMARLVEA 236
            V+  +  +  A +A   L +A
Sbjct: 278 EVVKKFPKSVEATQAARFLEKA 299



 Score = 42.8 bits (100), Expect = 0.058,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 53/146 (36%), Gaps = 10/146 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
              +    + T     + +Y+KA    KE  F KA  Y+ + +  F     A  ++    
Sbjct: 164 DEDEPGETAATSSDPAKALYDKAYALYKEDQFEKARSYWAEFTDTFKSHSFAPSAVFWQG 223

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD-QRATKLMLQ 160
              +    Y +A  L E+ I +Y +S       Y   +    +     +D     +L   
Sbjct: 224 QCYFKLKDYSRAVILFEDVIEKYAKS-----AKYKAAL----LRAGYSWDYLGKPELAKM 274

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGR 186
            M+ +V+++  S     A  ++   +
Sbjct: 275 RMAEVVKKFPKSVEATQAARFLEKAK 300



 Score = 40.5 bits (94), Expect = 0.24,   Method: Composition-based stats.
 Identities = 17/139 (12%), Positives = 48/139 (34%), Gaps = 22/139 (15%)

Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
             Y    +  +  +         +    Y +   + + +  +   A F+           
Sbjct: 181 ALYDKAYALYKEDQ--------FEKARSYWAEFTDTFKSHSFAPSAVFWQGQC------- 225

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
                  Y K  +Y  A+  F+ V+  Y+ +   + A+ R   ++  L   + A+  ++ 
Sbjct: 226 -------YFKLKDYSRAVILFEDVIEKYAKSAKYKAALLRAGYSWDYLGKPELAKMRMAE 278

Query: 253 IQERYPQGYWARYVETLVK 271
           + +++P+   A      ++
Sbjct: 279 VVKKFPKSVEATQAARFLE 297


>gi|312891213|ref|ZP_07750734.1| tetratricopeptide TPR_3 [Mucilaginibacter paludis DSM 18603]
 gi|311296292|gb|EFQ73440.1| tetratricopeptide TPR_3 [Mucilaginibacter paludis DSM 18603]
          Length = 619

 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 47/131 (35%), Gaps = 7/131 (5%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y +A L + +Q+  KA    +   + FP   +    L+  A +      YQ A +  +
Sbjct: 492 KMYARADLLIYKQDPDKAVITLDSIDKVFPGNTLTDDILMAKARILIQKKDYQLALAPLQ 551

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           +    +      D   +++G  Y   + D                +I+  Y  S ++  A
Sbjct: 552 DIEKNHASGLWADDAVFMLGDIYENHLND-------KAKAQICYQKIITDYPGSTWLNEA 604

Query: 179 RFYVTVGRNQL 189
           R      R  L
Sbjct: 605 RKRFRTLRGDL 615


>gi|153872159|ref|ZP_02001130.1| soluble lytic murein transglycosylase precursor [Beggiatoa sp. PS]
 gi|152071375|gb|EDN68870.1| soluble lytic murein transglycosylase precursor [Beggiatoa sp. PS]
          Length = 798

 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 75/255 (29%), Gaps = 62/255 (24%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS-----LLMS-----------AFVQYS 106
            A  + +  N+ +AY  ++    + P    A K+      L                 Y 
Sbjct: 213 TAEAYRQLGNYHQAYTLYDSIWYETPAGAWADKARKVLRELEQKVPTLQPKSLSTDEYYQ 272

Query: 107 -------AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
                  AG +  A +    +I  +P+    DY+ YL  +S   + R+           +
Sbjct: 273 FIQKIWNAGLHNTALTEINAFIKAHPDYSKADYLLYLKIISLHAVRRNDD--------AV 324

Query: 160 QYMSRIVERYTNSP-------YVKGARFY----------VTVGRNQLAAKEVEI-GRYYL 201
             M  + +RY  S        Y   A             V    +     E  I   Y  
Sbjct: 325 STMKTLRDRYPTSKRLPAAGIYAIKALRRSDNTPQIQYWVNWIVDNYPNHEKSIEALYNW 384

Query: 202 KRGEYV-------AAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEAREVV 250
             G Y          I     V+   S         ++A  +++     L   D+A E +
Sbjct: 385 --GGYQCNVVSQEEGIKVLWQVIRKGSQTATPHSVVDDAFWKIIWVQRHLKQTDKAIETL 442

Query: 251 SLIQERYPQGYWARY 265
             + + Y +  + R 
Sbjct: 443 LKLLKTYSESNYYRK 457


>gi|71892118|ref|YP_277850.1| putative periplasmic protein [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
 gi|71796224|gb|AAZ40975.1| putative periplasmic protein [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
          Length = 261

 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 45/129 (34%), Gaps = 15/129 (11%)

Query: 61  YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y++AV   L+++ +++A E F    R+ P +     S      + Y+ G           
Sbjct: 143 YKQAVSLVLEKKQYNQAIEAFQNFIRNHPESIYQSNSHYWLGQLYYNKGNK---HDAARH 199

Query: 120 Y---ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
           +   +  YP+S         +G+   +  +                 ++ + Y NS   K
Sbjct: 200 FALVVKNYPKSLKASDALLKIGIIMQETEQK--------DKAKTIYKKVGKLYPNSNAAK 251

Query: 177 GARFYVTVG 185
            A+  +   
Sbjct: 252 QAQKRLIHL 260



 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 47/127 (37%), Gaps = 14/127 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            +    +  +++     ++     +  +  S Y   + +++                YY 
Sbjct: 143 YKQAVSLVLEKKQYNQAIEAFQNFIRNHPESIYQSNSHYWLGQL-------------YYN 189

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           K  ++ AA   F LV+ NY  +  A +A+ ++          D+A+ +   + + YP   
Sbjct: 190 KGNKHDAARH-FALVVKNYPKSLKASDALLKIGIIMQETEQKDKAKTIYKKVGKLYPNSN 248

Query: 262 WARYVET 268
            A+  + 
Sbjct: 249 AAKQAQK 255



 Score = 45.9 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 47/127 (37%), Gaps = 22/127 (17%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +Y QA    + +I  +PES      +Y +G  Y    +   +D        ++ + +V+
Sbjct: 154 KQYNQAIEAFQNFIRNHPESIYQSNSHYWLGQLYYN--KGNKHD------AARHFALVVK 205

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y  S     A   + +   +   K+               A   ++ V   Y ++  A+
Sbjct: 206 NYPKSLKASDALLKIGIIMQETEQKD--------------KAKTIYKKVGKLYPNSNAAK 251

Query: 228 EAMARLV 234
           +A  RL+
Sbjct: 252 QAQKRLI 258


>gi|242279894|ref|YP_002992023.1| hypothetical protein Desal_2428 [Desulfovibrio salexigens DSM 2638]
 gi|242122788|gb|ACS80484.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio salexigens
           DSM 2638]
          Length = 794

 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 64/225 (28%), Gaps = 48/225 (21%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-----KSLLMSAFVQYSAGKYQQAASLGE 118
           A L++ +    +A           P    +      +  L + ++     +  +A    +
Sbjct: 304 AGLYMAQGRQEEAIRVLLDGVALDPEGTESSDYVVYRKQLATMYL--DMNEPNKAIEQLD 361

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
             I   P+       +YL G  Y    R          L +    ++V     S     A
Sbjct: 362 SVIELNPKD---AEAHYLRGQIYLLEGRG--------NLAVSEFRQVVRDNPES-----A 405

Query: 179 RFYVTVGRNQLAAKEVEIG----------------------RYYLKRGEYVAAIPRFQLV 216
             YV + R  L   E  I                         YL R ++  AI   Q +
Sbjct: 406 PAYVLLARAHLVNGETNIAIENLKEAINLEPGYAPAREVLINTYLDRKDWHQAILELQRL 465

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
                D       +A + + Y      + A    + + E++P   
Sbjct: 466 REKRPDDIQI---LAAIGDVYSIKGDKNLASRTYNELSEKFPDSP 507



 Score = 39.7 bits (92), Expect = 0.43,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 59/187 (31%), Gaps = 34/187 (18%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +  ++L E   + A   F Q  RD P +     + ++ A      G+   A    +E 
Sbjct: 375 YLRGQIYLLEGRGNLAVSEFRQVVRDNPESA---PAYVLLARAHLVNGETNIAIENLKEA 431

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           I   P      Y      +    +      D++     +  + R+ E+  +         
Sbjct: 432 INLEPG-----YAPAREVLINTYL------DRKDWHQAILELQRLREKRPDD-------- 472

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
                   LA     IG  Y  +G+   A   +  +   + D+   E  +A L  +   L
Sbjct: 473 -----IQILA----AIGDVYSIKGDKNLASRTYNELSEKFPDSPVGEMKLAELARS---L 520

Query: 241 ALMDEAR 247
                A 
Sbjct: 521 GKNSLAE 527



 Score = 36.2 bits (83), Expect = 5.4,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 64/202 (31%), Gaps = 34/202 (16%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A   L     + A E   +     P    AR+ L+ +         + QA    +    +
Sbjct: 412 ARAHLVNGETNIAIENLKEAINLEPGYAPAREVLINT---YLDRKDWHQAILELQRLREK 468

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG--ARFY 181
            P+   +              I DV   +    L  +  + + E++ +SP  +   A   
Sbjct: 469 RPDDIQI-----------LAAIGDVYSIKGDKNLASRTYNELSEKFPDSPVGEMKLAELA 517

Query: 182 VTVGRNQLAAKEVEIG---------------RYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
            ++G+N LA                        ++ + +Y AA    + +L  + D    
Sbjct: 518 RSLGKNSLAEMHYTAALKVAPDSLAAIQGKVDIFILQHKYTAATNFCERLLQKFPDNARI 577

Query: 227 EEAMARLVEAYVALALMDEARE 248
            E    L + + A    ++A  
Sbjct: 578 YE---LLGKVHAAWGNFEDAET 596


>gi|119504266|ref|ZP_01626346.1| hypothetical protein MGP2080_00300 [marine gamma proteobacterium
           HTCC2080]
 gi|119459774|gb|EAW40869.1| hypothetical protein MGP2080_00300 [marine gamma proteobacterium
           HTCC2080]
          Length = 309

 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 45/121 (37%), Gaps = 12/121 (9%)

Query: 67  FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG--KYQQAASLGEEYITQY 124
           ++K +NF+ A + F       P    A  +      +       + + A    +  + QY
Sbjct: 196 YVKSRNFTAAVDAFQDFLGRHPLGAYAPNAHYWLGELYLVVDPSEPELARQNFKLLLDQY 255

Query: 125 PESKNVDYVYYLVGMSYA-QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
           P++  V    Y +G  +  +  RD            +Y+ +++  Y   P  + AR ++ 
Sbjct: 256 PKNAKVPDALYKLGKVHFLKGSRDRSR---------EYLEQVIREYPRHPAAQLARDFLD 306

Query: 184 V 184
            
Sbjct: 307 E 307



 Score = 43.2 bits (101), Expect = 0.035,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 36/106 (33%), Gaps = 12/106 (11%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           R     +      + R+    Y   A +++      +   E E+ R              
Sbjct: 200 RNFTAAVDAFQDFLGRHPLGAYAPNAHYWLGELYLVVDPSEPELAR------------QN 247

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           F+L+L  Y       +A+ +L + +      D +RE +  +   YP
Sbjct: 248 FKLLLDQYPKNAKVPDALYKLGKVHFLKGSRDRSREYLEQVIREYP 293


>gi|121998998|ref|YP_001003785.1| hypothetical protein Hhal_2219 [Halorhodospira halophila SL1]
 gi|121590403|gb|ABM62983.1| Tetratricopeptide domain protein [Halorhodospira halophila SL1]
          Length = 252

 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 45/131 (34%), Gaps = 8/131 (6%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y+ A   L +  + +A E F            A  ++   A   Y+  +++ A +   
Sbjct: 125 ELYQAAFRQLGDGLYEEAREGFRDVLDTDADGDYAANAVYWIAETYYAEREFEDAEAYFN 184

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
             +  Y ES  V      +G    +  R         +     +  + E + ++     A
Sbjct: 185 RVVDDYEESNKVADAQLKLGYIAFEEDR--------LEEARDRLEAVQEDHPDTTAANLA 236

Query: 179 RFYVTVGRNQL 189
           +  ++  R  L
Sbjct: 237 QQRLSEIRRLL 247



 Score = 35.5 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 39/105 (37%), Gaps = 14/105 (13%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           +   +    +++   +  Y   A +++       A +E E    Y  R            
Sbjct: 140 EEAREGFRDVLDTDADGDYAANAVYWIAETY--YAEREFEDAEAYFNR------------ 185

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           V+ +Y ++    +A  +L         ++EAR+ +  +QE +P  
Sbjct: 186 VVDDYEESNKVADAQLKLGYIAFEEDRLEEARDRLEAVQEDHPDT 230


>gi|261416344|ref|YP_003250027.1| hypothetical protein Fisuc_1955 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261372800|gb|ACX75545.1| hypothetical protein Fisuc_1955 [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 638

 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 79/230 (34%), Gaps = 30/230 (13%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           + +Y     + +    +       L     + AY  FN+ + ++P    + +S       
Sbjct: 259 KALYKVEAYEKQRPHYLVRIGETTLLAGRNADAYVIFNKVNTEYPKTEQSSRS------- 311

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI---RDVPYDQRATKLMLQ 160
            ++ G Y+Q+ +                   Y + MSY       R +    + ++    
Sbjct: 312 YFNMGDYEQSKTQN-----------------YELAMSYYDSSYIARSISEYAQKSRERRN 354

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR-YYLKRGEYVAAIPRFQLVLAN 219
            + R+V     +  +  ++  +   ++  A  E  I   + LK  E  +A+ R   V+  
Sbjct: 355 ALRRLVSMRDRNEEILQSKDSIPNMKSFFA-NEFMIAELFLLKLSEADSAVARLTNVIEK 413

Query: 220 YSDAEHAEEAMARLVEAYVA-LALMDEAREVVSLIQERYPQGYWARYVET 268
             D      A       Y   L   D A E+   I E+YP   +A+  + 
Sbjct: 414 SDDTASVMRASYARAFIYDEFLHDPDTAEELYKEIIEKYPNTDYAKQAQA 463


>gi|220904572|ref|YP_002479884.1| hypothetical protein Ddes_1304 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219868871|gb|ACL49206.1| hypothetical protein Ddes_1304 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 982

 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 79/230 (34%), Gaps = 38/230 (16%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD---FPFAGVARKSLLMSA 101
           D   + V        V E+A   ++E+ + +A     +        P   +  K+L   +
Sbjct: 288 DEQGNPVPRPINPEIVMEEAERLIRERKYIEALPQLEKLRSLPGLHP--EMLEKALYYIS 345

Query: 102 F---VQYSAGK---YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
                +Y+      Y+   S   E +     S  V      +G++   +   V       
Sbjct: 346 DCTWARYADNPLAGYEAIVSSTSEAMNANLRSPRVPEALLRLGLANVNVGNLVD------ 399

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
                Y+  ++ RY +  Y   A+ +  +G+ QL            KRG    A   F +
Sbjct: 400 --AGGYIVALLRRYPD--YPGVAQGFTALGKAQL------------KRGLDERAEQSFSM 443

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
           VL  Y ++ + +EA   L EA+        A+     +   +    W RY
Sbjct: 444 VLDKYPESSYLQEASVGLAEAFNRQKKFQNAQ-----LILDFISKRWPRY 488



 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 18/139 (12%), Positives = 43/139 (30%), Gaps = 20/139 (14%)

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
            Y    +   + RD    ++  K   +   ++++ +T     +  +      ++ +AA  
Sbjct: 808 LYQRAYATYFLARDAEQ-RKDIKDSYELNRKVIDLFTRLQEERSDKADPQRIKDAMAAL- 865

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLA---NY-----SDAEHAEEAMARLVEAYVALALMDE 245
           ++I               R    L     Y      ++        R    Y  L     
Sbjct: 866 MDISE----------VANRVPEALEWVGRYNAYASPESPEYPGLRFREARLYRKLGDAAR 915

Query: 246 AREVVSLIQERYPQGYWAR 264
           A+ ++  +   YP   +A+
Sbjct: 916 AQALLEDVVRNYPNSPFAQ 934



 Score = 35.5 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 54/173 (31%), Gaps = 23/173 (13%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI-T 122
               LK     +A + F+     +P +   +++ +  A       K+Q A  + + +I  
Sbjct: 425 GKAQLKRGLDERAEQSFSMVLDKYPESSYLQEASVGLAEAFNRQKKFQNAQLILD-FISK 483

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
           ++P        YY+   S+  +          T   L                      +
Sbjct: 484 RWPR-------YYIDEPSFLLLQAGNDEALGKTGPALGLYWLYYNLVPGHEGNDELLLRL 536

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
                         G  Y ++G +++A   ++ V   ++    A  A  RL E
Sbjct: 537 --------------GDMYARQGGWISAEFVYRYVERVFAGTASASVARLRLAE 575


>gi|217076209|ref|YP_002333925.1| tetratricopeptide repeat domain protein [Thermosipho africanus
           TCF52B]
 gi|217036062|gb|ACJ74584.1| tetratricopeptide repeat domain protein [Thermosipho africanus
           TCF52B]
          Length = 375

 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 41/116 (35%), Gaps = 24/116 (20%)

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT---------QYPESKN 129
            F +     P +    + + + A+  Y    Y  A ++ E  I           Y     
Sbjct: 271 LFEKFD---PNSNETLRFMWLIAYQYYKQKNYIMAKNILETIIDKALSNNLNYLY----F 323

Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           +D VYY   + Y +M           +      +  +ER+ NS Y K A +++ + 
Sbjct: 324 IDDVYYYRALIYYEM--------GDFENAYLLFNDFIERFPNSTYKKHAEYFIKIL 371


>gi|285803495|pdb|3KD7|A Chain A, Designed Tpr Module (Ctpr390) In Complex With Its Peptide-
           Ligand (Hsp90 Peptide)
 gi|285803496|pdb|3KD7|B Chain B, Designed Tpr Module (Ctpr390) In Complex With Its Peptide-
           Ligand (Hsp90 Peptide)
 gi|285803497|pdb|3KD7|C Chain C, Designed Tpr Module (Ctpr390) In Complex With Its Peptide-
           Ligand (Hsp90 Peptide)
 gi|285803498|pdb|3KD7|D Chain D, Designed Tpr Module (Ctpr390) In Complex With Its Peptide-
           Ligand (Hsp90 Peptide)
 gi|285803499|pdb|3KD7|E Chain E, Designed Tpr Module (Ctpr390) In Complex With Its Peptide-
           Ligand (Hsp90 Peptide)
          Length = 125

 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 40/116 (34%), Gaps = 14/116 (12%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
                + K+ ++ KA EY+ +     P       +        Y  G YQ+A    ++ +
Sbjct: 14  NLGNAYYKQGDYQKAIEYYQKALELDPNNA---SAWYNLGNAYYKQGDYQKAIEYYQKAL 70

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
              P +      +Y  G +Y +        Q   +  ++   + +E   N+   K 
Sbjct: 71  ELDPNNAK---AWYRRGNAYYK--------QGDYQKAIEDYQKALELDPNNAKAKQ 115



 Score = 40.5 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 26/70 (37%), Gaps = 3/70 (4%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y     + K+ ++ KA EY+ +     P      K+        Y  G YQ+A    ++ 
Sbjct: 47  YNLGNAYYKQGDYQKAIEYYQKALELDPNNA---KAWYRRGNAYYKQGDYQKAIEDYQKA 103

Query: 121 ITQYPESKNV 130
           +   P +   
Sbjct: 104 LELDPNNAKA 113



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 42/120 (35%), Gaps = 28/120 (23%)

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
                 Y  G YQ+A    ++ +   P + +    +Y +G +Y +        Q   +  
Sbjct: 14  NLGNAYYKQGDYQKAIEYYQKALELDPNNAS---AWYNLGNAYYK--------QGDYQKA 62

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
           ++Y  + +E   N+      R                 G  Y K+G+Y  AI  +Q  L 
Sbjct: 63  IEYYQKALELDPNNAKAWYRR-----------------GNAYYKQGDYQKAIEDYQKALE 105


>gi|85706709|ref|ZP_01037801.1| hypothetical protein ROS217_08159 [Roseovarius sp. 217]
 gi|85668767|gb|EAQ23636.1| hypothetical protein ROS217_08159 [Roseovarius sp. 217]
          Length = 281

 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/156 (12%), Positives = 58/156 (37%), Gaps = 10/156 (6%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
           A          S+     ++      +++ +E+A   L+  N  +A   F      +P +
Sbjct: 132 AGGGTAALPSPSTPTPTDNAPQLAIGEKDDFERAEAALQAGNHDEAAAGFATFLSTYPGS 191

Query: 91  GVARKSLLMSAFVQYSAG-KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
            ++ ++ L+      ++G + + A +  + +    P+        + +G +  ++     
Sbjct: 192 PLSGRAGLLRGEALEASGQQSEAARAYLDSFSAA-PDGAEAPESLFRLGRALGRL----- 245

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
                T+     ++++  RY  +  V  A+  ++  
Sbjct: 246 ---GQTQEACVTLAQVAARYPTAAAVASAQTEMSRL 278



 Score = 40.9 bits (95), Expect = 0.17,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 33/102 (32%), Gaps = 14/102 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                 +  +  Y  SP    A           + ++ E  R YL    + AA       
Sbjct: 176 EAAAGFATFLSTYPGSPLSGRAGLLRGEALEA-SGQQSEAARAYL--DSFSAA------- 225

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
                D   A E++ RL  A   L    EA   ++ +  RYP
Sbjct: 226 ----PDGAEAPESLFRLGRALGRLGQTQEACVTLAQVAARYP 263


>gi|298715552|emb|CBJ28105.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 510

 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/150 (12%), Positives = 40/150 (26%), Gaps = 22/150 (14%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
           +  ++  V   +   V     +  +    L E     A   +       P A      L 
Sbjct: 21  DVSTAMKVVTPNPETVSAAEALKLEGNALLAESKLGHAVGKYTAAIDLHPTAIY----LS 76

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATK 156
             AF      ++  A    +  +       +  Y   YY  G +   + +         K
Sbjct: 77  NRAFCYVKLEQFGLAILDADMALEL-----DSTYVKAYYRRGSANMALAK--------FK 123

Query: 157 LMLQYMSRIVERYTNSPYVK---GARFYVT 183
           L ++   ++ +    S        A   + 
Sbjct: 124 LAVKDFRKVTKMQPKSKEAAAKLKASEKMQ 153


>gi|157962383|ref|YP_001502417.1| Tol-Pal system YbgF [Shewanella pealeana ATCC 700345]
 gi|157847383|gb|ABV87882.1| Tol-Pal system YbgF [Shewanella pealeana ATCC 700345]
          Length = 241

 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 45/127 (35%), Gaps = 14/127 (11%)

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           +  +   ++   ++  +  +   ++ ++RY NS Y   A +++                 
Sbjct: 122 ASYEQAVNLVLKEKKYEAAIPAFAQFIQRYPNSSYAPNANYWLGQLL------------- 168

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
              + E+  A   F  V+  Y+D+    E++ +L           +A+     + + Y  
Sbjct: 169 -YNKSEFDGASKAFTTVVEKYTDSSKRGESLVKLGMIAEKTGDKAKAKAYYQKVTQEYAN 227

Query: 260 GYWARYV 266
              AR  
Sbjct: 228 SAAARIA 234



 Score = 35.5 bits (81), Expect = 9.3,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 61  YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
           YE+AV   LKE+ +  A   F Q  + +P +  A  +      + Y+  ++  A
Sbjct: 124 YEQAVNLVLKEKKYEAAIPAFAQFIQRYPNSSYAPNANYWLGQLLYNKSEFDGA 177


>gi|56697939|ref|YP_168310.1| hypothetical protein SPO3107 [Ruegeria pomeroyi DSS-3]
 gi|56679676|gb|AAV96342.1| conserved hypothetical protein [Ruegeria pomeroyi DSS-3]
          Length = 271

 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 45/128 (35%), Gaps = 14/128 (10%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           ++ A   L+  +++KA + F Q    +P + +A ++ L         G  ++AA     Y
Sbjct: 152 FDSATQALEAGDYAKAADLFTQFDASYPGSPLAAEAHLKRGKALDGLGDTREAARA---Y 208

Query: 121 ITQYPES---KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           +  +             Y +G +  ++          T      +  +  R+ ++  V  
Sbjct: 209 LASFTGDGSGPFSAEALYKLGSALGRL--------GQTSQACVTLGEVSVRFPSAASVAD 260

Query: 178 ARFYVTVG 185
           A   +   
Sbjct: 261 AHREMASL 268


>gi|167752636|ref|ZP_02424763.1| hypothetical protein ALIPUT_00891 [Alistipes putredinis DSM 17216]
 gi|167659705|gb|EDS03835.1| hypothetical protein ALIPUT_00891 [Alistipes putredinis DSM 17216]
          Length = 275

 Score = 50.9 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/121 (9%), Positives = 36/121 (29%), Gaps = 10/121 (8%)

Query: 19  LYKFALTIFFSIAVCFLVG-------WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ 71
           + ++ L +  ++    + G          Q  +     S        +++++A       
Sbjct: 1   MKRYILFLLATLLSAAVSGQTAARTDSLAQHPQSEQTASAAYASDPDKLWDQANTAYINN 60

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           +F  A   +            + K     A   +   +  +A       +   P ++++ 
Sbjct: 61  DFPTAISLYETILSS---GRQSGKLYYNLANAYFKEQEIGRAILNYNRALRLNPGNEDIR 117

Query: 132 Y 132
           Y
Sbjct: 118 Y 118


>gi|186686827|ref|YP_001870020.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102]
 gi|186469179|gb|ACC84979.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC
           73102]
          Length = 168

 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 50/141 (35%), Gaps = 11/141 (7%)

Query: 46  VYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
              DS T+     E Y ++    ++ +++  A E FNQ  +  P       + +      
Sbjct: 36  QVPDSQTENPKDTETYFKRGFKRIESKDYRGAIEDFNQILKIEPNNAY---AYVGRGLGN 92

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM-S 163
           +   +YQ A +  ++ I     + ++ Y YY  G++   + +D P      +        
Sbjct: 93  FCLDEYQAAKTDFDKAIEI---TPDIPYAYYFRGLTNFAL-KDKPAAIADLQKSFTLFKQ 148

Query: 164 RIVERYTNSPYVKGARFYVTV 184
              + +  +     A   +  
Sbjct: 149 EGNQEF--AQKATDALQKIQE 167


>gi|206602858|gb|EDZ39339.1| Protein of unknown function [Leptospirillum sp. Group II '5-way
           CG']
          Length = 264

 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/136 (22%), Positives = 50/136 (36%), Gaps = 25/136 (18%)

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAA--------KE--------VEIGRYYLK- 202
           Q   ++V+ Y +S   K A  ++   +NQLA          E         +I  +Y + 
Sbjct: 106 QLFEKVVKDYPDSSSAKVAPLFLASIQNQLAQPQKAVNWLHEGLEKNSGDTKILPFYYES 165

Query: 203 -------RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
                    EY  A+  FQ V   +     A+ A   + + Y  L     A      +Q+
Sbjct: 166 LGVTFMSMKEYDQALAMFQKV-TKFQGKTLADAAYYNIGKVYELLNQPALAILNYRKLQK 224

Query: 256 RYPQGYWARYVETLVK 271
           ++P   WA   E  +K
Sbjct: 225 KFPSSPWASEAEAYIK 240



 Score = 35.1 bits (80), Expect = 9.8,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 79/213 (37%), Gaps = 25/213 (11%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L    ++A   LV       +     +        +++ K +   K+ +++   + F + 
Sbjct: 53  LVGLVALAGVGLVWHIYSDKKKKEQQAAALETRAEQMFSKNMQN-KKADWASIDQLFEKV 111

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV-DYVYYLVGMSYA 142
            +D+P +  A+ + L  A +Q    + Q+A +   E + +      +  + Y  +G+++ 
Sbjct: 112 VKDYPDSSSAKVAPLFLASIQNQLAQPQKAVNWLHEGLEKNSGDTKILPFYYESLGVTFM 171

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
            M     YDQ      L    ++ +       +  A +Y              IG+ Y  
Sbjct: 172 SMK---EYDQ-----ALAMFQKVTKF--QGKTLADAAYY-------------NIGKVYEL 208

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
             +   AI  ++ +   +  +  A EA A + +
Sbjct: 209 LNQPALAILNYRKLQKKFPSSPWASEAEAYIKQ 241


>gi|149193984|ref|ZP_01871082.1| TPR repeat [Caminibacter mediatlanticus TB-2]
 gi|149135937|gb|EDM24415.1| TPR repeat [Caminibacter mediatlanticus TB-2]
          Length = 293

 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 50/122 (40%), Gaps = 14/122 (11%)

Query: 67  FLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
              E    KA EYF    S+++ F   +   L   A   +   +Y QA +  ++ +  YP
Sbjct: 184 LFNEGKLQKAKEYFLYTLSKNY-FPATSAFYLGEIA---FKNKEYNQALAYYKKSVEIYP 239

Query: 126 E-SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
           + +   D + Y  G+S+ ++           +       ++++ Y NS Y K A+  +  
Sbjct: 240 KKTSFTDKLLYHSGVSFLKL--------GNKEAAKLSFQKLIKDYPNSKYSKIAKKELEK 291

Query: 185 GR 186
            +
Sbjct: 292 LK 293



 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 30/80 (37%), Gaps = 1/80 (1%)

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD-AEHAEEAMARLVEAYVALALMDEARE 248
           A     +G    K  EY  A+  ++  +  Y       ++ +     +++ L   + A+ 
Sbjct: 208 ATSAFYLGEIAFKNKEYNQALAYYKKSVEIYPKKTSFTDKLLYHSGVSFLKLGNKEAAKL 267

Query: 249 VVSLIQERYPQGYWARYVET 268
               + + YP   +++  + 
Sbjct: 268 SFQKLIKDYPNSKYSKIAKK 287


>gi|323963123|gb|EGB58693.1| tol-pal system protein YbgF [Escherichia coli H489]
          Length = 263

 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 49/156 (31%), Gaps = 9/156 (5%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89
           +           +      +          Y  A+  +++++    A   F    +++P 
Sbjct: 116 SGAAASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPD 175

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +     +      + Y+ GK   AA      +  YP+S       + VG+        + 
Sbjct: 176 STYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGV--------IM 227

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            D+  T        +++ +Y  +   K A+  +   
Sbjct: 228 QDKGDTAKAKAVYQQVISKYLGTDGAKQAQKRLNAM 263



 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 44/131 (33%), Gaps = 14/131 (10%)

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +       +  D+      +      ++ Y +S Y+  A +++              G
Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWL--------------G 187

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           +    +G+   A   F  V+ NY  +  A +AM ++           +A+ V   +  +Y
Sbjct: 188 QLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 247

Query: 258 PQGYWARYVET 268
                A+  + 
Sbjct: 248 LGTDGAKQAQK 258


>gi|253702667|ref|YP_003023856.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. M21]
 gi|251777517|gb|ACT20098.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. M21]
          Length = 331

 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 38/112 (33%), Gaps = 6/112 (5%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A   F               S    A      G+YQ A S  E+ + +YP ++  D   +
Sbjct: 21  AATLFTAGGCSHLGGTFRAASTFEEASGHSDRGEYQTALSSYEQALKKYPAAR--DRALF 78

Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
            +G+ +          Q+     L+    +++ Y  S Y + +   V    N
Sbjct: 79  EMGIIH----SHPDNQQKDYGKALECYRTLIKDYPRSSYRQDSEMMVFYLVN 126



 Score = 38.9 bits (90), Expect = 0.78,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 31/72 (43%), Gaps = 6/72 (8%)

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARL--VEAYVALALMD--EAREVVSLIQERYP 258
           RGEY  A+  ++  L  Y      + A+  +  + ++      D  +A E    + + YP
Sbjct: 52  RGEYQTALSSYEQALKKYP--AARDRALFEMGIIHSHPDNQQKDYGKALECYRTLIKDYP 109

Query: 259 QGYWARYVETLV 270
           +  + +  E +V
Sbjct: 110 RSSYRQDSEMMV 121


>gi|290474097|ref|YP_003466973.1| putative periplasmic protein contains a protein prenylyltransferase
           domain [Xenorhabdus bovienii SS-2004]
 gi|289173406|emb|CBJ80183.1| putative periplasmic protein contains a protein prenylyltransferase
           domain [Xenorhabdus bovienii SS-2004]
          Length = 255

 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 50/149 (33%), Gaps = 9/149 (6%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVL-FLKEQNFSKAYEYFNQCSRDFPFAGVAR 94
                  +      + T    ++  Y+ AV   +  + + KA   F    + +P +    
Sbjct: 113 TATPSAKTDGNPPAAPTSTGSEKGDYDAAVALAINTKEYDKAISAFQTFVKTYPKSKYLS 172

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
            +      + Y+ GK   AA      +  YP+S+      Y VG+   +  + V      
Sbjct: 173 NTNYWLGQLNYNKGKKDDAAYYFATVVKDYPKSQKSSDSLYKVGLIMQEKGQKV------ 226

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVT 183
                    ++V++Y  +   K A   + 
Sbjct: 227 --KAKAVYQQVVKQYPGTNSAKMAEKKIA 253



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 39/112 (34%), Gaps = 14/112 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             +      V+ Y  S Y+    +++                    +G+   A   F  V
Sbjct: 153 KAISAFQTFVKTYPKSKYLSNTNYWLGQLN--------------YNKGKKDDAAYYFATV 198

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           + +Y  ++ + +++ ++           +A+ V   + ++YP    A+  E 
Sbjct: 199 VKDYPKSQKSSDSLYKVGLIMQEKGQKVKAKAVYQQVVKQYPGTNSAKMAEK 250



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 52/144 (36%), Gaps = 25/144 (17%)

Query: 88  PFAGVARKSLLMSAFVQY-SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM-I 145
           P +  + K    +A     +  +Y +A S  + ++  YP+SK          +S     +
Sbjct: 128 PTSTGSEKGDYDAAVALAINTKEYDKAISAFQTFVKTYPKSKY---------LSNTNYWL 178

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
             + Y++        Y + +V+ Y  S     + + V +                 ++G+
Sbjct: 179 GQLNYNKGKKDDAAYYFATVVKDYPKSQKSSDSLYKVGLIMQ--------------EKGQ 224

Query: 206 YVAAIPRFQLVLANYSDAEHAEEA 229
            V A   +Q V+  Y     A+ A
Sbjct: 225 KVKAKAVYQQVVKQYPGTNSAKMA 248



 Score = 35.9 bits (82), Expect = 5.7,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 24/66 (36%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           +   EY  AI  FQ  +  Y  +++       L +        D+A    + + + YP+ 
Sbjct: 146 INTKEYDKAISAFQTFVKTYPKSKYLSNTNYWLGQLNYNKGKKDDAAYYFATVVKDYPKS 205

Query: 261 YWARYV 266
             +   
Sbjct: 206 QKSSDS 211


>gi|163846279|ref|YP_001634323.1| hypothetical protein Caur_0695 [Chloroflexus aurantiacus J-10-fl]
 gi|222524035|ref|YP_002568505.1| tetratricopeptide repeat-containing protein [Chloroflexus sp.
           Y-400-fl]
 gi|163667568|gb|ABY33934.1| Tetratricopeptide TPR_2 repeat protein [Chloroflexus aurantiacus
           J-10-fl]
 gi|222447914|gb|ACM52180.1| Tetratricopeptide TPR_2 repeat protein [Chloroflexus sp. Y-400-fl]
          Length = 1766

 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 65/202 (32%), Gaps = 28/202 (13%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           ++ Y +A  FL+     +A           P    A++   +      +      A +  
Sbjct: 7   QDAYTQARTFLEANQIEQAIGLIQHILEHHPDNLEAQR---LLGEAYLAKRDLPAATATF 63

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           E+ +   P  +N+   +  +GM+Y          Q      +    + +E   +   +  
Sbjct: 64  EQVLQVDP--ENIP-AHVGLGMAYEW--------QGRLDKAIAEFEQALEIRPD---MPE 109

Query: 178 ARFYVTVGRNQLAAKEVEI--------GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
            R  +     +    E            R Y +      AI  F+ V+A + D     +A
Sbjct: 110 LRAQLVRLYTEAWGSEHAALRLSRPGLARLYARGHMLPQAIHEFRQVIAEHPD---RLDA 166

Query: 230 MARLVEAYVALALMDEAREVVS 251
              L+EA      +DEA  V  
Sbjct: 167 WVGLIEALWRDGQLDEAATVCR 188


>gi|254445676|ref|ZP_05059152.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
           DG1235]
 gi|198259984|gb|EDY84292.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
           DG1235]
          Length = 890

 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 63/180 (35%), Gaps = 31/180 (17%)

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +  AR + L    V      +  +A + +++I  YP+ K+     + + +S         
Sbjct: 324 SPQARIAHLDWISVARQMQAWNASALIAQKFIDMYPDDKDAAQALFWIALS--------Q 375

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE---- 205
            DQ + +  +  + +++E          + +Y+      L   ++ I  +          
Sbjct: 376 IDQNSYQPAIVSLKKLLETNPTRQLEAASHYYLGYCHFMLGQHQIAIASFQQATHSAPDL 435

Query: 206 YVAA------------IPRFQLVLANY---SDAEH----AEEAMARLVEAYVALALMDEA 246
            +AA              + +  +  +    ++        EA  R + A+ AL  +DEA
Sbjct: 436 PIAAQAQLWIGICQFTTNQLEAAIETFAQIKNSPAHSFLRPEAAYREIAAHYALGNLDEA 495


>gi|118578874|ref|YP_900124.1| hypothetical protein Ppro_0433 [Pelobacter propionicus DSM 2379]
 gi|118501584|gb|ABK98066.1| TPR repeat-containing protein [Pelobacter propionicus DSM 2379]
          Length = 254

 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 50/127 (39%), Gaps = 18/127 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
             A+ +L + ++ ++    N   R         ++ L    V ++  + +QA +  +  I
Sbjct: 144 NLALAYLGKGDYPRSLAELNAILR---GNPRRLEARLSLGRVYFAMDRPEQAIAEYQRVI 200

Query: 122 TQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
             Y      DY   +Y +G++Y + ++++P               ++    N+   + A 
Sbjct: 201 DIYQ-----DYGDAHYHLGLAYLK-VQNIP-------AARNAFREVIRIKPNTELGRSAM 247

Query: 180 FYVTVGR 186
            Y+ + +
Sbjct: 248 GYLELLK 254



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 52/171 (30%), Gaps = 29/171 (16%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
            V +L+ + +  A + F     D  F      + +  A      G Y ++ +     +  
Sbjct: 110 GVAYLELKRWDNAIQQFKIVKDD-LFFEFTENAAINLALAYLGKGDYPRSLAELNAILRG 168

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
            P           +G  Y  M R         +  +    R+++ Y        A +++ 
Sbjct: 169 NPRRLE---ARLSLGRVYFAMDR--------PEQAIAEYQRVIDIY---QDYGDAHYHLG 214

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
           +               YLK     AA   F+ V+    + E    AM  L 
Sbjct: 215 LA--------------YLKVQNIPAARNAFREVIRIKPNTELGRSAMGYLE 251


>gi|126327367|ref|XP_001366386.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 825

 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/260 (13%), Positives = 75/260 (28%), Gaps = 55/260 (21%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLL 98
            Q++    L   +D      +  K        ++ KA E++      D   +     +L 
Sbjct: 468 TQANSYADLAVNSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALY 523

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY-------------AQMI 145
                     +  +A      ++  +   +N   V Y +   Y              Q+I
Sbjct: 524 NIGLTYKKLNRLDEALDC---FLKLHAILRNSAQVLYQIANVYEIMEDPNQSIEWLMQLI 580

Query: 146 RDVPYDQRATKL-------------MLQYMSRIVERYT--------------NSPYVKGA 178
             VP D RA                  QY       +               ++ + + A
Sbjct: 581 SVVPTDSRALSKLGELYDNEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKA 640

Query: 179 RF---YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
                   + +      ++ +   Y + G Y  A+  ++ +   + +     E +  LV 
Sbjct: 641 IKYFERAALIQPTQVKWQLMVASCYRRSGNYQKALDTYKEIHRKFPE---NVECLRFLVR 697

Query: 236 AYVALALMDEAREVVSLIQE 255
               + L  E +E  + ++ 
Sbjct: 698 LCTDIGLK-EVQEYATKLKR 716


>gi|109899244|ref|YP_662499.1| tetratricopeptide TPR_2 [Pseudoalteromonas atlantica T6c]
 gi|109701525|gb|ABG41445.1| Tetratricopeptide TPR_2 [Pseudoalteromonas atlantica T6c]
          Length = 251

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/128 (13%), Positives = 46/128 (35%), Gaps = 15/128 (11%)

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           +Y + +  +  D +     +      ++ + NS Y   A +++                 
Sbjct: 132 AYDKAVNLILKD-KLYDDAIPEFQSFLQNFPNSSYASNAHYWLGQLL------------- 177

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
              + ++ AA  +F+ ++  + D+    +AM +L       + +  A ++   +   YP 
Sbjct: 178 -FNKQDWAAAANQFETLMNQFPDSSKRADAMLKLGICEQERSNIARAEQLWKKVLTEYPT 236

Query: 260 GYWARYVE 267
               +  E
Sbjct: 237 SSARKLAE 244



 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 53/147 (36%), Gaps = 9/147 (6%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
             +  V   S      + + Y+KAV   LK++ +  A   F    ++FP +  A  +   
Sbjct: 113 NQTNQVSQPSSQTSLNEDQAYDKAVNLILKDKLYDDAIPEFQSFLQNFPNSSYASNAHYW 172

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
              + ++   +  AA+  E  + Q+P+S         +G+           ++       
Sbjct: 173 LGQLLFNKQDWAAAANQFETLMNQFPDSSKRADAMLKLGIC--------EQERSNIARAE 224

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGR 186
           Q   +++  Y  S   K A   +   +
Sbjct: 225 QLWKKVLTEYPTSSARKLAEIKLNAVK 251


>gi|86159741|ref|YP_466526.1| hypothetical protein Adeh_3322 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85776252|gb|ABC83089.1| tetratricopeptide repeat protein [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 1193

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 55/143 (38%), Gaps = 29/143 (20%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           +QA +L +  I++YP    +D V Y +G + ++  R+ P         L+    +++++ 
Sbjct: 160 EQAVALYKAIISRYPSYPRLDEVLYFLGENLSRRDRNDP-------DALKAYRALIQKFP 212

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR-------GEYVAAIPRFQLVLANYSDA 223
           +S YV  A               +  G YY  R       G    A+  ++     Y ++
Sbjct: 213 SSRYVPDAW--------------MAFGEYYFDRANKNDRNGNLRKALESYRKAAE-YQES 257

Query: 224 EHAEEAMARLVEAYVALALMDEA 246
                A+ +    +  L    EA
Sbjct: 258 SVYGYALYKQGWVHYNLGNWSEA 280



 Score = 38.9 bits (90), Expect = 0.69,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 28/72 (38%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D           Y  +V +++     +A E   Q  + +P   +A KSL  +A    +  
Sbjct: 703 DWPASRLAPTAYYNASVDYVRAHRLDRAMEIREQFLQRYPTHQLAPKSLYDNAEAYEAVA 762

Query: 109 KYQQAASLGEEY 120
            + +AA   E Y
Sbjct: 763 DFGRAADHYERY 774


>gi|257059198|ref|YP_003137086.1| peptidase S1 and S6 chymotrypsin/Hap [Cyanothece sp. PCC 8802]
 gi|256589364|gb|ACV00251.1| peptidase S1 and S6 chymotrypsin/Hap [Cyanothece sp. PCC 8802]
          Length = 810

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 61/198 (30%), Gaps = 46/198 (23%)

Query: 59  EVYEK-AVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASL 116
           + Y         +    +A   + +  +  P F     ++           GK ++A + 
Sbjct: 132 QAYNNLGNALSDQGKLEEAIAAYQKAIQLNPNFT----QAYYNLGIALSDQGKLEEAIAA 187

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            ++ I   P   N    YY +G++          DQ      +    + ++   N     
Sbjct: 188 YQKAIQLNP---NYADAYYNLGVALF--------DQGKLDEAIAAYQKAIQLDPN----- 231

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
            A           A   +    Y  K+G+   AI  +Q  +    +          L EA
Sbjct: 232 DAN----------AYNNLGAALY--KQGKLEEAIAAYQKAIQLNPN----------LAEA 269

Query: 237 YVALA--LMDEAREVVSL 252
           Y  L   L D+ +   ++
Sbjct: 270 YNNLGVALSDQGKRDEAI 287



 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/116 (14%), Positives = 37/116 (31%), Gaps = 14/116 (12%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           Y    Y   V    +    +A   + +  +  P       +        Y  GK ++A +
Sbjct: 198 YADAYYNLGVALFDQGKLDEAIAAYQKAIQLDPNDA---NAYNNLGAALYKQGKLEEAIA 254

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
             ++ I   P   N+   Y  +G++ +        DQ      +    + ++   N
Sbjct: 255 AYQKAIQLNP---NLAEAYNNLGVALS--------DQGKRDEAIAAYQKAIQLNPN 299



 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/133 (13%), Positives = 41/133 (30%), Gaps = 28/133 (21%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ- 104
           V+  SV   +   +++++     K   +++A   F +     P            A    
Sbjct: 18  VFTPSVVLSQSIDQLFQQGRTAGKMGKYTEAEAIFRRVIELDP----------NLADAYN 67

Query: 105 ------YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
                 Y  GK  +A +  ++ I   P   +    Y  +G +           Q   +  
Sbjct: 68  NLGNALYYQGKLDEAIAAYQKAIQLNPNDAD---AYNNLGNALYY--------QGKLEEA 116

Query: 159 LQYMSRIVERYTN 171
           +    + ++   N
Sbjct: 117 IAAYQKAIQLNPN 129



 Score = 45.5 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/114 (12%), Positives = 35/114 (30%), Gaps = 14/114 (12%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +  Y   +    +    +A   + +  +  P    A  +        +  GK  +A +  
Sbjct: 166 QAYYNLGIALSDQGKLEEAIAAYQKAIQLNP--NYA-DAYYNLGVALFDQGKLDEAIAAY 222

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           ++ I   P   N    Y  +G +  +        Q   +  +    + ++   N
Sbjct: 223 QKAIQLDPNDAN---AYNNLGAALYK--------QGKLEEAIAAYQKAIQLNPN 265



 Score = 39.3 bits (91), Expect = 0.64,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 34/110 (30%), Gaps = 14/110 (12%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
              +    +    +A   + +  +  P    A  +        YS GK ++A +  ++ I
Sbjct: 374 NLGLALRNQGKRDEAITAYQKAIQLNP--NFA-LAYNNLGNALYSQGKREEAIAAYQKAI 430

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
              P             ++Y  +   +  DQ      +    + ++   N
Sbjct: 431 QLNPNF----------ALAYNNLGNALS-DQGKRDEAIAAYQKAIQLNPN 469


>gi|75146761|sp|Q84K11|PPP5_SOLLC RecName: Full=Serine/threonine-protein phosphatase 5; AltName:
           Full=LePP5
 gi|28141004|gb|AAO26213.1| type 5 protein serine/threonine phosphatase 62 kDa isoform [Solanum
           lycopersicum]
 gi|28141085|gb|AAO26215.1| type 5 protein serine/threonine phosphatase 62 kDa isoform [Solanum
           lycopersicum]
          Length = 556

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 40/137 (29%), Gaps = 23/137 (16%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
           ++     E+ + A    K   +S+A + +      +   A          AF      +Y
Sbjct: 9   SNASRAEELKQLANEAFKGHKYSQAIDLYTQAIELNGENAVY----YANRAFAHTKLEEY 64

Query: 111 QQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
             A   G   I   P      Y   YY  G +Y  M           K  L+   ++ + 
Sbjct: 65  GSAIQDGTRAIEIDPR-----YSKGYYRRGAAYLAM--------GKFKDALKDFQQVKKL 111

Query: 169 YTNSPYVKGARFYVTVG 185
             N P    A   +   
Sbjct: 112 CPNDP---DATKKLKEC 125


>gi|317130399|ref|YP_004096681.1| heat shock protein DnaJ domain protein [Bacillus cellulosilyticus
           DSM 2522]
 gi|315475347|gb|ADU31950.1| heat shock protein DnaJ domain protein [Bacillus cellulosilyticus
           DSM 2522]
          Length = 389

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 56/143 (39%), Gaps = 27/143 (18%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
             +S R  Y  S  +      ++ +A+  +    + +A   FN     +P   VAR    
Sbjct: 53  SDESQRAAYDSSGQNDDEYERLFSEAMAMMNNGKYYQASNLFNDIIVRYPGDRVAR---- 108

Query: 99  MSAFVQYSA------GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
                 Y A          +A ++ ++ + + P   NVDY+     ++     ++  +DQ
Sbjct: 109 -----YYKALSLIEINSSDKALAIAKQLLIEDPN--NVDYME----LTVLAHEKEKNHDQ 157

Query: 153 RATKLMLQYMSRIVERYTN-SPY 174
                 ++ + ++++RY   S Y
Sbjct: 158 -----AIRLLEKLIDRYPEKSEY 175


>gi|220933727|ref|YP_002512626.1| hypothetical protein Tgr7_0542 [Thioalkalivibrio sp. HL-EbGR7]
 gi|219995037|gb|ACL71639.1| conserved hypothetical protein [Thioalkalivibrio sp. HL-EbGR7]
          Length = 922

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 42/113 (37%), Gaps = 7/113 (6%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY---VA 208
           Q   +  +    R++E    S     A   +   R + +   V  G     R       A
Sbjct: 43  QGGAERAMDTYERVLEEAPPSEMRAEAMRRLADLRQEHSEGRVAEGD----RPAPGTQTA 98

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            I  ++  L  Y D  H +  + +L  AY      + +++ ++ + ++YP+  
Sbjct: 99  IIALYEQRLHEYPDHPHNDRVLYQLARAYEHEQQREASQDALTRLAQQYPESP 151



 Score = 42.0 bits (98), Expect = 0.091,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 59/141 (41%), Gaps = 24/141 (17%)

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSY-AQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
            +L E+ + +YP+  + D V Y +  +Y  +  R+   D          ++R+ ++Y  S
Sbjct: 100 IALYEQRLHEYPDHPHNDRVLYQLARAYEHEQQREASQD---------ALTRLAQQYPES 150

Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
           P +  A F             + + R      +Y +A   +Q VLA   D    E A+ +
Sbjct: 151 PLLAEAHFRRGET--------LFVDR------DYPSAGDAYQAVLALGDDTGFYEHALYK 196

Query: 233 LVEAYVALALMDEAREVVSLI 253
           L  +       +++ +V+ ++
Sbjct: 197 LGWSLFRQQRHEDSVDVLLVL 217



 Score = 39.3 bits (91), Expect = 0.64,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 60/201 (29%), Gaps = 44/201 (21%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           +         R    V+ +A +        +A  +F +     P       +   +A + 
Sbjct: 567 EAERRPDMADRLAASVFRQAEVARDAGETDQAIVHFLRV----PEGRFHASAQYDAADLL 622

Query: 105 YSAGKYQQAASLGEEYITQYPESK-------NVDYVY------------YLVGMSYAQ-- 143
            +   + QAA + E + T+YPE          +   Y            YL   S +   
Sbjct: 623 LAREDWTQAAQVLEGFRTRYPEHPLRLDATRKLAMAYGSAGQPDRAAGEYLRIASASDDP 682

Query: 144 --------MIRDVPYDQRATKLMLQYMSRIVERYTNSPY--VKGARFYVTVGRNQLAAKE 193
                   +  D+  D       +  +   VER+  SP      AR  +      LA+ +
Sbjct: 683 AEQREALLLAADLYRDAGDRGREVAVLGDYVERFP-SPLDPAMDARQRLLEA--HLASND 739

Query: 194 VEIGRYYLKRGEYVAAIPRFQ 214
               R       +  AI R  
Sbjct: 740 ANQVR------RWREAIIRAD 754



 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 25/85 (29%), Gaps = 5/85 (5%)

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
              + Q   ++P      + L   A       + + +         QYPES  +   ++ 
Sbjct: 100 IALYEQRLHEYPDHPHNDRVLYQLARAYEHEQQREASQDALTRLAQQYPESPLLAEAHFR 159

Query: 137 VGMSYAQMIRDVPYDQRATKLMLQY 161
            G +       V  D  +     Q 
Sbjct: 160 RGETLF-----VDRDYPSAGDAYQA 179


>gi|79324899|ref|NP_001031534.1| PP5.2 (PROTEIN PHOSPHATASE 5.2); phosphoprotein phosphatase/
           protein binding / protein serine/threonine phosphatase
           [Arabidopsis thaliana]
 gi|75148953|sp|Q84XU2|PPP5_ARATH RecName: Full=Serine/threonine-protein phosphatase 5
 gi|28141302|gb|AAO26216.1| type 5 protein serine/threonine phosphatase 60 kDa isoform
           [Arabidopsis thaliana]
 gi|330255078|gb|AEC10172.1| serine/threonine-protein phosphatase 5 [Arabidopsis thaliana]
          Length = 538

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 41/143 (28%), Gaps = 29/143 (20%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCS---RDFPFAGVARKSLLMSAFVQ 104
           +  +DV    E   +A    K   +S A + +         +  +   A ++     F  
Sbjct: 5   NENSDVSRAEEFKSQANEAFKGHKYSSAIDLYTKAIELNSNNAVY--WANRA-----FAH 57

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
               +Y  A     + I       +  Y   YY  G +Y  M           K  L+  
Sbjct: 58  TKLEEYGSAIQDASKAIEV-----DSRYSKGYYRRGAAYLAM--------GKFKDALKDF 104

Query: 163 SRIVERYTNSPYVKGARFYVTVG 185
            ++     N P    A   +   
Sbjct: 105 QQVKRLSPNDP---DATRKLKEC 124


>gi|300727193|ref|ZP_07060610.1| conserved hypothetical protein [Prevotella bryantii B14]
 gi|299775541|gb|EFI72134.1| conserved hypothetical protein [Prevotella bryantii B14]
          Length = 410

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/147 (10%), Positives = 46/147 (31%), Gaps = 34/147 (23%)

Query: 61  YEKAVLFLKEQNFSKAYE---------YFNQCSRDFPFAGVARKSLLMSAFVQ-----YS 106
           Y  A    +++++  A +         Y ++          A ++ + S         + 
Sbjct: 146 YSNAKDNQEQEDYEYAMQSTDPAVLQSYLDKYKD-------ADQAHIDSIQSHLEILKHK 198

Query: 107 AGKYQQAA-----SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
              +  A      S  E+YI   P+S +               I  + +   + +  +  
Sbjct: 199 DDDWNNAVISGSRSALEDYIRNNPDSPHKQEAL--------NKIDSLDWISASNENTIDA 250

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQ 188
             + +  + +  ++  A   +   +++
Sbjct: 251 YQQYLSNHVDGIHIDEANEAMKKIKSK 277


>gi|171914075|ref|ZP_02929545.1| hypothetical protein VspiD_22890 [Verrucomicrobium spinosum DSM
           4136]
          Length = 963

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 39/124 (31%), Gaps = 14/124 (11%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM--SAFVQYSAGKYQQAASLGEEYI 121
             L  +  N   A + F +       A  A K  L      V + + ++       +E I
Sbjct: 364 GSLAFESGNIEAAIKAFERAK----LAKDADKERLNYLLGVVLFESQRFDDCRLAFQELI 419

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
           +    S   D   Y + +SY         D + T+     +   +       Y+  A++ 
Sbjct: 420 SLNKTSAYKDEAEYRIALSYFFQ-----NDSQKTRKA---LREYIAGNPKGQYLVDAKYR 471

Query: 182 VTVG 185
           +   
Sbjct: 472 LAFI 475



 Score = 39.7 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 31/67 (46%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
             +  K+ +  KA   F Q    +P +    K+ +    ++++  +YQ+A  L  E I +
Sbjct: 771 GEMLTKKGDAEKAAACFQQLRAKYPNSEFGDKAPVGLGDIEFNNKEYQKALDLYNEAIEK 830

Query: 124 YPESKNV 130
           Y  S ++
Sbjct: 831 YASSSSI 837



 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 37/128 (28%), Gaps = 8/128 (6%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
             D   +R  Y   V+  + Q F      F +       +    ++    A   +     
Sbjct: 386 AKDADKERLNYLLGVVLFESQRFDDCRLAFQELISLNKTSAYKDEAEYRIALSYFFQNDS 445

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           Q+      EYI   P+ + +    Y +     Q            K  ++ + ++V    
Sbjct: 446 QKTRKALREYIAGNPKGQYLVDAKYRLAFIDFQG--------GDKKDAMEQLEKLVVEAP 497

Query: 171 NSPYVKGA 178
           N   V   
Sbjct: 498 NDQNVGQV 505



 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 8/70 (11%), Positives = 29/70 (41%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           + ++  ++  +Y +       + +++A ++F    + FP +     + +       +AG 
Sbjct: 36  ATSNKDFEAVMYLEGAAHFNLKQWAEAIKFFEDFIKKFPQSNSLNDAKMAVGEAYLNAGN 95

Query: 110 YQQAASLGEE 119
             +  +  +E
Sbjct: 96  ADKGIASLKE 105



 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 67/184 (36%), Gaps = 35/184 (19%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQR 153
           +L   A   +  G++  A          +  + N D+  V YL G ++  +        +
Sbjct: 9   ALFSEAQAAFGQGRFDVALQKIG---AIHTATSNKDFEAVMYLEGAAHFNL--------K 57

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGAR--------------FYVTVGRNQLAAKE------ 193
                +++    ++++  S  +  A+                +   +   A  E      
Sbjct: 58  QWAEAIKFFEDFIKKFPQSNSLNDAKMAVGEAYLNAGNADKGIASLKEAAAVPELRDRAG 117

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA--YVALALMDEAREVVS 251
           + I  ++ K G+   A+   ++VL +      AE+  A L+ +  YV     D+A +++ 
Sbjct: 118 LMIAYHHKKGGQPDEALSILEVVLKDLQGTPTAEQQQAILMASEIYVGKGDTDKAGQMME 177

Query: 252 LIQE 255
            ++ 
Sbjct: 178 KLRA 181


>gi|311990281|gb|ADQ26327.1| ser/thr protein phosphatase type 5 [Metarhizium anisopliae]
 gi|322701465|gb|EFY93214.1| serine/threonine-protein phosphatase 5 [Metarhizium acridum CQMa
           102]
          Length = 475

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/130 (12%), Positives = 38/130 (29%), Gaps = 23/130 (17%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
            K        ++  A +++++    +   P      ++             Y  A +   
Sbjct: 10  NKGNKSFASGDYPAAIDFYSKAIELNDKDP-TFFTNRAQ-----AYIKTEAYGYAIADAG 63

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           + +   P  K +   YY  G++   ++R         K  +      V    N+     A
Sbjct: 64  KALELNP--KLIK-AYYRRGLARTAILR--------PKEAIDDFKECVRLDPNNK---DA 109

Query: 179 RFYVTVGRNQ 188
           R  +   +  
Sbjct: 110 RLKLEECKKI 119


>gi|298372468|ref|ZP_06982458.1| conserved hypothetical protein [Bacteroidetes oral taxon 274 str.
           F0058]
 gi|298275372|gb|EFI16923.1| conserved hypothetical protein [Bacteroidetes oral taxon 274 str.
           F0058]
          Length = 898

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/195 (12%), Positives = 58/195 (29%), Gaps = 32/195 (16%)

Query: 94  RKSLLMSAFVQYSAGK--Y------QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
           +++    A   Y+ G   Y        A     E+ +++P+ +           +Y    
Sbjct: 563 QQANQQIADAMYNMGDIFYTKIMDIPSADKTYREFQSRFPKDE-------RKAETYYIEY 615

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR--------FYVTVGRNQLAA--KEVE 195
           R      +  +    +  R++  Y  S Y               +   +N +     ++ 
Sbjct: 616 RINGTLNKPDEQA-AFRDRLIREYPTSRYAMMLANPNYAANLQKMQQVQNDMYRETYDMY 674

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           I       G Y      +  +L +Y  +EH          +   L     +   +  I  
Sbjct: 675 I------DGNYNGVKQNYDKMLRDYPLSEHLPRFALLSALSSAKLGQYAASEAELDSIVA 728

Query: 256 RYPQGYWARYVETLV 270
           +YP+       + ++
Sbjct: 729 KYPESDITPISKDIL 743


>gi|75907328|ref|YP_321624.1| hypothetical protein Ava_1105 [Anabaena variabilis ATCC 29413]
 gi|75701053|gb|ABA20729.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
          Length = 732

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 53/163 (32%), Gaps = 15/163 (9%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E Y++     + +++ +A + F    +  P      K+L+     +Y+   Y+ A +   
Sbjct: 456 EYYQQGHAAYQVRDYKQAVDNFTHAIQQEPTNA---KALVNRGNARYNLKDYEGALADYT 512

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
             +   P        +   G S   +        +  +L +   +  ++    +     A
Sbjct: 513 VALQINPNEIK---AFVNRGNSRLMLAEYSNDPDQQYRLAIADFNHALKL---NEKEAEA 566

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
                + R+Q+A    +         +Y  AI  F   L    
Sbjct: 567 YIRRGIVRSQMAKYSSDT------IKDYQEAIADFDQALKLNP 603


>gi|222149665|ref|YP_002550622.1| tol-pal system protein YbgF [Agrobacterium vitis S4]
 gi|221736647|gb|ACM37610.1| tol-pal system protein YbgF [Agrobacterium vitis S4]
          Length = 333

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 51/137 (37%), Gaps = 16/137 (11%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           ++++Y+ A   +   ++  A   F      +P +G A  +       QYS  +Y+     
Sbjct: 209 EQDLYQIAYSHVLSGDYKAAEGEFRDFISRYPKSGKAADANFWLGEAQYSQARYKD---S 265

Query: 117 GEEYITQYPE---SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
            E ++  Y     +     +   +GMS A +      D + T      +  + +RY ++ 
Sbjct: 266 AETFLKAYQSYGKTPKAPEMLLKLGMSLAAL------DNKDT--ACATLREVNKRYPDAS 317

Query: 174 YVKGARFYVTVGRNQLA 190
                +      + +LA
Sbjct: 318 KA--VQNKAASEQKRLA 332



 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 36/128 (28%), Gaps = 22/128 (17%)

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
            Y +  S+              K         + RY  S     A F++   +   A   
Sbjct: 212 LYQIAYSHVLS--------GDYKAAEGEFRDFISRYPKSGKAADANFWLGEAQYSQAR-- 261

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
                       Y  +   F     +Y     A E + +L  +  AL   D A   +  +
Sbjct: 262 ------------YKDSAETFLKAYQSYGKTPKAPEMLLKLGMSLAALDNKDTACATLREV 309

Query: 254 QERYPQGY 261
            +RYP   
Sbjct: 310 NKRYPDAS 317


>gi|46580475|ref|YP_011283.1| TPR domain-containing protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46449894|gb|AAS96543.1| TPR domain protein [Desulfovibrio vulgaris str. Hildenborough]
 gi|311234217|gb|ADP87071.1| tol-pal system protein YbgF [Desulfovibrio vulgaris RCH1]
          Length = 257

 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 52/146 (35%), Gaps = 8/146 (5%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
           V     ++R       T        Y++A+  L+     +A + F+     +P   +   
Sbjct: 116 VARAVSATRPAAKPVATAAGGASAAYKEALALLERGRPEEARQRFDAFIEAYPSDALQPN 175

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +        Y+  +Y  A    ++ +  YP+ +         GM+Y ++      D+   
Sbjct: 176 AHYWRGEALYAQRRYADAIIDFKDVVASYPKHQKASDSLLKAGMAYQRL-----NDEENA 230

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFY 181
           +L  + +    E+Y  +P    AR  
Sbjct: 231 RLQFKALQ---EQYPATPAAVLARKR 253



 Score = 42.0 bits (98), Expect = 0.086,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 33/126 (26%), Gaps = 22/126 (17%)

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           A      G+ ++A    + +I  YP        +Y  G +     R            + 
Sbjct: 144 ALALLERGRPEEARQRFDAFIEAYPSDALQPNAHYWRGEALYAQRRYAD--------AII 195

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
               +V  Y        +     +   +L  +E               A  +F+ +   Y
Sbjct: 196 DFKDVVASYPKHQKASDSLLKAGMAYQRLNDEE--------------NARLQFKALQEQY 241

Query: 221 SDAEHA 226
                A
Sbjct: 242 PATPAA 247



 Score = 39.3 bits (91), Expect = 0.53,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 40/103 (38%), Gaps = 14/103 (13%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           +   Q     +E Y +      A ++                  Y +R  Y  AI  F+ 
Sbjct: 154 EEARQRFDAFIEAYPSDALQPNAHYWRGEAL-------------YAQRR-YADAIIDFKD 199

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           V+A+Y   + A +++ +   AY  L   + AR     +QE+YP
Sbjct: 200 VVASYPKHQKASDSLLKAGMAYQRLNDEENARLQFKALQEQYP 242


>gi|302327544|gb|ADL26745.1| hypothetical protein FSU_2475 [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 658

 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 79/230 (34%), Gaps = 30/230 (13%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           + +Y     + +    +       L     + AY  FN+ + ++P    + +S       
Sbjct: 279 KALYKVEAYEKQRPHYLVRIGETTLLAGRNADAYVIFNKVNTEYPKTEQSSRS------- 331

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI---RDVPYDQRATKLMLQ 160
            ++ G Y+Q+ +                   Y + MSY       R +    + ++    
Sbjct: 332 YFNMGDYEQSKTQN-----------------YELAMSYYDSSYIARSISEYAQKSRERRN 374

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR-YYLKRGEYVAAIPRFQLVLAN 219
            + R+V     +  +  ++  +   ++  A  E  I   + LK  E  +A+ R   V+  
Sbjct: 375 ALRRLVSMRDRNEEILQSKDSIPNMKSFFA-NEFMIAELFLLKLSEADSAVARLTNVIEK 433

Query: 220 YSDAEHAEEAMARLVEAYVA-LALMDEAREVVSLIQERYPQGYWARYVET 268
             D      A       Y   L   D A E+   I E+YP   +A+  + 
Sbjct: 434 SDDTASVMRASYARAFIYDEFLHDPDTAEELYKEIIEKYPNTDYAKQAQA 483


>gi|305665011|ref|YP_003861298.1| hypothetical protein FB2170_01881 [Maribacter sp. HTCC2170]
 gi|88707425|gb|EAQ99670.1| hypothetical protein FB2170_01881 [Maribacter sp. HTCC2170]
          Length = 1007

 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 69/213 (32%), Gaps = 42/213 (19%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM-----SAFVQYSAGKYQQAAS 115
           Y  A    K +++  A  YFN  S+    +G   ++ L           +   KY  A  
Sbjct: 505 YNLAYAHFKLRDYGSAIGYFNSFSK----SGTTDQAKLNDSYLRLGDSYFVTSKYWPALE 560

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
              + +         DY  +   +SY  + +            ++ + + V RY  S   
Sbjct: 561 TYNKALAL--SGPEKDYAAFQKALSYGFVGKSASK--------IEELDKFVSRYPKSTLK 610

Query: 176 KGA-------------RFYVTVGRNQLAAKE----------VEIGRYYLKRGEYVAAIPR 212
             A                  +  ++L              +  G  +        A+ +
Sbjct: 611 DDALFELGNSYISAGQENKGLIAYDRLIQGYRGSSLVPQAIMRQGLVHYNSNRNEKALGK 670

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
           F+ V+ ++ + + A +A+A     YV L  +DE
Sbjct: 671 FKTVVRDFPNTQEAIQAVATAKLVYVDLGRVDE 703



 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 58/194 (29%), Gaps = 30/194 (15%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI-T 122
              +   + ++ A  Y             +     +  +  Y  G +  A     + I  
Sbjct: 251 GESYFNLKQYANAIPYLEAYKGKR--GKWSNTDYYLLGYCFYKQGDFVNAIQQFNKIIGG 308

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
               S+N    YY +   Y ++ +         +  L       +   +    K A  Y+
Sbjct: 309 TNSVSQN---AYYHLAECYLKLDKK--------QEALNAFRNASQMDFSDKIQKDA--YL 355

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
                  A    EIG        Y          L  Y +  HA+E    LV++Y+    
Sbjct: 356 NY-----ARLSYEIG------NAYEPVPQVISSYLQQYPNDTHAQEMQELLVDSYITSKN 404

Query: 243 MDEAREVVSLIQER 256
            + A E   L+++ 
Sbjct: 405 FEGAME---LLEKN 415



 Score = 35.5 bits (81), Expect = 7.2,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 28/75 (37%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           RD+    VTD       +E A     E N + A + +    + FP    A K+    A +
Sbjct: 709 RDLDFVEVTDTELDNASFESADKQNLEGNTNAAIKGYESYIKQFPNGLHAVKANFNLAQL 768

Query: 104 QYSAGKYQQAASLGE 118
            +   + + A    +
Sbjct: 769 YFGKNQKENALPYYK 783


>gi|328947410|ref|YP_004364747.1| hypothetical protein Tresu_0501 [Treponema succinifaciens DSM 2489]
 gi|328447734|gb|AEB13450.1| hypothetical protein Tresu_0501 [Treponema succinifaciens DSM 2489]
          Length = 961

 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 57/133 (42%), Gaps = 8/133 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A+L  +    S+A + F++    F  +  A +S    A + Y+   Y+ AA    EY
Sbjct: 647 YQIALLNSRIGKISEADKIFSEIQNKFYNSPFADESSFRRADLYYNLRNYETAAMRFSEY 706

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
             ++P+ K +D  YY    SY ++ +         +  +     +VE +  S ++  AR 
Sbjct: 707 QRKFPKGKFIDASYYCSADSYRKLAQ--------IEKSVLQYKILVENFPKSTFIYNARK 758

Query: 181 YVTVGRNQLAAKE 193
            ++    +    E
Sbjct: 759 NLSEIFEEQKKYE 771



 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 64/199 (32%), Gaps = 24/199 (12%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A   LK  +F  A     +    F        S+L+ A +   + KYQ A    E Y   
Sbjct: 578 ANSALKNFDFENAIVQAKKALSFFSSQEEKENSVLLCASIYSDSEKYQDAIKFLEPYAKN 637

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
              S       Y + +  +++               +  S I  ++ NSP+   + F   
Sbjct: 638 --TSVFSIRCRYQIALLNSRI--------GKISEADKIFSEIQNKFYNSPFADESSFRR- 686

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
                           Y     Y  A  RF      +   +  + +     ++Y  LA +
Sbjct: 687 -------------ADLYYNLRNYETAAMRFSEYQRKFPKGKFIDASYYCSADSYRKLAQI 733

Query: 244 DEAREVVSLIQERYPQGYW 262
           +++     ++ E +P+  +
Sbjct: 734 EKSVLQYKILVENFPKSTF 752


>gi|251792149|ref|YP_003006869.1| hypothetical protein NT05HA_0353 [Aggregatibacter aphrophilus
           NJ8700]
 gi|247533536|gb|ACS96782.1| tetratricopeptide domain protein [Aggregatibacter aphrophilus
           NJ8700]
          Length = 396

 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 78/200 (39%), Gaps = 32/200 (16%)

Query: 48  LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           LD+  +  +++++  K   A  F+    F +A E+      D P    A  +L   A + 
Sbjct: 103 LDNSPNYTFEQKLLAKQQLARDFMAVGFFDRA-EHLYILMVDEP--EFAEGALQQLAVIY 159

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
               ++++A +  E+     P S  ++  +Y     Y + ++++P    + +   Q + +
Sbjct: 160 QKTKEWKKAINAAEKLAKISPNSNRIELAHY-----YCEYVQNLP--DESKEEPKQILLQ 212

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
            ++   N                      + +   Y+K+ EY +A+   + +L    +A 
Sbjct: 213 ALKVSPNCVRAS-----------------MMLADLYIKQKEYKSAVDILENILT--QNAA 253

Query: 225 HAEEAMARLVEAYVALALMD 244
           +  E +  L   Y  L  +D
Sbjct: 254 YIGEVLHSLKFCYQQLNQLD 273


>gi|256828297|ref|YP_003157025.1| tol-pal system protein YbgF [Desulfomicrobium baculatum DSM 4028]
 gi|256577473|gb|ACU88609.1| tol-pal system protein YbgF [Desulfomicrobium baculatum DSM 4028]
          Length = 318

 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/143 (12%), Positives = 53/143 (37%), Gaps = 9/143 (6%)

Query: 42  SSRDVYLDSVTDVRYQ-REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
           S+ +    +        +E+Y++A+       + +A   + +  + FP   +   ++   
Sbjct: 181 STPETQPQAAPQAEVPGQELYQQALESFYAMKYKEAQITWAEFVKGFPKDPLVPNAVFWQ 240

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
               +    Y  A    ++ I ++  S          G+S+ ++ +D        +    
Sbjct: 241 GECFFQMQDYANAVLTYQKVIEEHKTSNKYTAALLKQGISFYKLKKD--------QAGKL 292

Query: 161 YMSRIVERYTNSPYVKGARFYVT 183
            +  +++++  S   K A+ Y+ 
Sbjct: 293 VLEDLIKKHPQSAEAKRAQAYLK 315


>gi|323138992|ref|ZP_08074052.1| tol-pal system protein YbgF [Methylocystis sp. ATCC 49242]
 gi|322395746|gb|EFX98287.1| tol-pal system protein YbgF [Methylocystis sp. ATCC 49242]
          Length = 334

 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 55/158 (34%), Gaps = 15/158 (9%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
             IA   LVG E  +  ++           +E Y++AV  L+   F  A +         
Sbjct: 181 LDIAHGRLVGDEPIAPAEIAPPPPAAPPGPKEEYDEAVSSLRAGRFEAAEKSLTTFLSKN 240

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ---YPESKNVDYVYYLVGMSYAQM 144
           P +  A  +        +  G++++A    E+Y+     Y +S         +G S + M
Sbjct: 241 PKSKFAPAATFNLGESFFLRGRHREA---AEKYLEISTKYGQSAQAPDALLRLGQSLSAM 297

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTN-SPYVKGARFY 181
                    A +      S I  +Y N +  +K A   
Sbjct: 298 --------GAKEQACASFSEIGVKYPNATARIKEAAQR 327



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 39/104 (37%), Gaps = 14/104 (13%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           +   + ++  + +   S +   A                 +G  +  RG +  A  ++  
Sbjct: 227 EAAEKSLTTFLSKNPKSKFAPAAT--------------FNLGESFFLRGRHREAAEKYLE 272

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           +   Y  +  A +A+ RL ++  A+   ++A    S I  +YP 
Sbjct: 273 ISTKYGQSAQAPDALLRLGQSLSAMGAKEQACASFSEIGVKYPN 316


>gi|37525409|ref|NP_928753.1| hypothetical protein plu1457 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36784837|emb|CAE13750.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 258

 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 53/156 (33%), Gaps = 9/156 (5%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKA-VLFLKEQNFSKAYEYFNQCSRDFPF 89
           A           +      S      ++  Y+ A  L +  + + KA   F    + +P 
Sbjct: 111 ANTASSTASNTKNSGNQASSSVSTGSEKGDYDAAVHLAVNTKEYDKAIIAFQSFVKSYPK 170

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +     +      + Y+ GK  +AA      + +YP+S+      Y VG+        + 
Sbjct: 171 SSYMPNANYWLGQLNYNKGKKDEAAYYFATVVKEYPKSQKSGESLYKVGL--------IM 222

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            D+           +++++Y  S   K A   ++  
Sbjct: 223 QDKGQKDKARSVYQQVMKQYPGSNAAKLAEKKLSTL 258



 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 40/112 (35%), Gaps = 14/112 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             +      V+ Y  S Y+  A +++                    +G+   A   F  V
Sbjct: 156 KAIIAFQSFVKSYPKSSYMPNANYWLGQLN--------------YNKGKKDEAAYYFATV 201

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           +  Y  ++ + E++ ++          D+AR V   + ++YP    A+  E 
Sbjct: 202 VKEYPKSQKSGESLYKVGLIMQDKGQKDKARSVYQQVMKQYPGSNAAKLAEK 253



 Score = 38.9 bits (90), Expect = 0.69,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 23/60 (38%)

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
              EY  AI  FQ  + +Y  + +   A   L +        DEA    + + + YP+  
Sbjct: 150 NTKEYDKAIIAFQSFVKSYPKSSYMPNANYWLGQLNYNKGKKDEAAYYFATVVKEYPKSQ 209


>gi|120602205|ref|YP_966605.1| TPR repeat-containing protein [Desulfovibrio vulgaris DP4]
 gi|120562434|gb|ABM28178.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio vulgaris DP4]
          Length = 257

 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 52/146 (35%), Gaps = 8/146 (5%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
           V     ++R       T        Y++A+  L+     +A + F+     +P   +   
Sbjct: 116 VARAVSATRPAAKPVATAAGGASAAYKEALALLERGRPEEARQRFDAFIEAYPSDALQPN 175

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +        Y+  +Y  A    ++ +  YP+ +         GM+Y ++      D+   
Sbjct: 176 AHYWRGEALYAQRRYADAIIDFKDVVASYPKHQKASDSLLKAGMAYQRL-----NDEENA 230

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFY 181
           +L  + +    E+Y  +P    AR  
Sbjct: 231 RLQFKALQ---EQYPATPAAVLARKR 253



 Score = 42.0 bits (98), Expect = 0.099,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 33/126 (26%), Gaps = 22/126 (17%)

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           A      G+ ++A    + +I  YP        +Y  G +     R            + 
Sbjct: 144 ALALLERGRPEEARQRFDAFIEAYPSDALQPNAHYWRGEALYAQRRYAD--------AII 195

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
               +V  Y        +     +   +L  +E               A  +F+ +   Y
Sbjct: 196 DFKDVVASYPKHQKASDSLLKAGMAYQRLNDEE--------------NARLQFKALQEQY 241

Query: 221 SDAEHA 226
                A
Sbjct: 242 PATPAA 247



 Score = 39.3 bits (91), Expect = 0.64,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 40/103 (38%), Gaps = 14/103 (13%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           +   Q     +E Y +      A ++                  Y +R  Y  AI  F+ 
Sbjct: 154 EEARQRFDAFIEAYPSDALQPNAHYWRGEAL-------------YAQRR-YADAIIDFKD 199

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           V+A+Y   + A +++ +   AY  L   + AR     +QE+YP
Sbjct: 200 VVASYPKHQKASDSLLKAGMAYQRLNDEENARLQFKALQEQYP 242


>gi|313141285|ref|ZP_07803478.1| competence lipoprotein [Helicobacter canadensis MIT 98-5491]
 gi|313130316|gb|EFR47933.1| competence lipoprotein [Helicobacter canadensis MIT 98-5491]
          Length = 145

 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 49/125 (39%), Gaps = 4/125 (3%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
           +L+         +Y  A    +EY  ++ + +N+D++ +L   +          DQ+  +
Sbjct: 1   MLILGRAHMQEEEYLLAIFYFDEYTKRFGDGQNIDFINFLKLQANYFAFAKQFRDQQLLE 60

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV--EIGRYYLKRGEYVAAIPRFQ 214
             ++      ++Y  S Y       +     +LA   +  EI + Y K+ +  AA    Q
Sbjct: 61  KSIKDAQDFGQKYPYSRYRPIVDTMLLKL--ELANLSLNKEIIKLYDKKDKPQAAEYYQQ 118

Query: 215 LVLAN 219
            +  N
Sbjct: 119 KINEN 123


>gi|94987465|ref|YP_595398.1| N-acetylmuramoyl-L-alanine amidase [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731714|emb|CAJ55077.1| N-acetylmuramoyl-L-alanine amidase [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 600

 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 48/150 (32%), Gaps = 12/150 (8%)

Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
           P S    Y      +   Q        +     +     +I   + +      A +Y  V
Sbjct: 45  PTSPGARYEEAKKALKNLQSDSINQKLRDPWLKISDLFFKIYTSFPDWINRPFALYYSAV 104

Query: 185 GRNQLAAKEVEIGRYYLKRGEYVA--AIPRFQLVLANYSDAEHAEEAMARLVEAY-VALA 241
             ++LA     +           A  AI  +Q V+  Y      E A+  + + Y   L 
Sbjct: 105 ALDELAKHSFTVSD---------AEKAIKCYQSVITKYPKRTITESALLNIAKVYAERLH 155

Query: 242 LMDEAREVVSLIQERYPQGYWARYVETLVK 271
             ++A++ +  +   YP+       +  +K
Sbjct: 156 KPNDAKKYLQKLLTDYPKSDKINEAQIYLK 185



 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 43/128 (33%), Gaps = 10/128 (7%)

Query: 45  DVYLDSVTDVRYQREVY--EKAVLFLKEQNFS-----KAYEYFNQCSRDFPFAGVARKSL 97
            +Y      +     +Y    A+  L + +F+     KA + +      +P   +   +L
Sbjct: 84  KIYTSFPDWINRPFALYYSAVALDELAKHSFTVSDAEKAIKCYQSVITKYPKRTITESAL 143

Query: 98  LMSAFVQY-SAGKYQQAASLGEEYITQYPESKNVDYVY-YLVGMSYAQMIRDVPYDQRAT 155
           L  A V      K   A    ++ +T YP+S  ++    YL  +   +          +T
Sbjct: 144 LNIAKVYAERLHKPNDAKKYLQKLLTDYPKSDKINEAQIYLKSLENLKEEPQ-KTSTTST 202

Query: 156 KLMLQYMS 163
               +   
Sbjct: 203 SKAKEAFH 210


>gi|302037718|ref|YP_003798040.1| hypothetical protein NIDE2405 [Candidatus Nitrospira defluvii]
 gi|300605782|emb|CBK42115.1| conserved protein of unknown function, TPR-like [Candidatus
           Nitrospira defluvii]
          Length = 805

 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 82/228 (35%), Gaps = 32/228 (14%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           D  L+        + + + A+L  +++   +A     +  + +P         ++ A + 
Sbjct: 129 DKVLEKHPQDPQAQAL-KIAMLAQQDK-MDRAIVRGEELIKQYPTEP---DVAILLATLY 183

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM-- 162
              G+ Q+A +     +  +P   ++        +   Q I D  +D +AT+ +L+ M  
Sbjct: 184 GQMGRLQEARATLHRALQAHPHHLDL--------LRNLQTILDKAHDDKATEQVLRQMIH 235

Query: 163 --------SRIVERYTNSPYVKG-ARFYVTVGRNQLAAKE---VEIGRY-YLKRGEYVAA 209
                      + R+ +  +    A   +          E   + +  +  ++RG+  AA
Sbjct: 236 EEPTLYDPRLKLARFFDQRHATDQAEAVLREALTVFPENEQAWLALADFLNIRRGK-DAA 294

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
               +        +     A+A L E++  L    EA+ V   + + Y
Sbjct: 295 RVALRQAAEQLPYSTQIPFALAALYESHKDL---AEAKRVYETLAKDY 339



 Score = 42.4 bits (99), Expect = 0.059,   Method: Composition-based stats.
 Identities = 28/245 (11%), Positives = 73/245 (29%), Gaps = 65/245 (26%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
             AL +  +++ C                       + +   KA  +++  NF KA    
Sbjct: 18  MIALAVILTLSACGG-----------------PQERKAQYRSKAQDYIQAGNFPKARVAL 60

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQY-------SAGKYQQAASLGEEYITQYPESKNVDYV 133
               +  P            A   +           ++ A +  ++ I   P+ K     
Sbjct: 61  RNVLKIDP----------KDADAYFLVAQVEEKEKNWRNAVANYQQVIEIVPDHKEA--- 107

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
             L+ ++   +      + +    + +   +++E++   P  +  +  +   ++++    
Sbjct: 108 --LIVLAKYYL------EAKLVDEVGRAADKVLEKHPQDPQAQALKIAMLAQQDKMDR-- 157

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
                          AI R + ++  Y            L   Y  +  + EAR  +   
Sbjct: 158 ---------------AIVRGEELIKQYPTEPDVA---ILLATLYGQMGRLQEARATLHRA 199

Query: 254 QERYP 258
            + +P
Sbjct: 200 LQAHP 204


>gi|197117090|ref|YP_002137517.1| pentapeptide repeat protein [Geobacter bemidjiensis Bem]
 gi|197086450|gb|ACH37721.1| pentapeptide repeat protein [Geobacter bemidjiensis Bem]
          Length = 848

 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 33/83 (39%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
           V   S        +++       +++ +  A +  +   + +P   +   ++   A   Y
Sbjct: 44  VPAPSFALDSEDSQIFISGFNAYQKKEYKTAIDSMSVLLKKYPDTPLKDMAIFWLARAHY 103

Query: 106 SAGKYQQAASLGEEYITQYPESK 128
            AG  Q AA    +++ +YPES 
Sbjct: 104 KAGHQQDAAKYMAQFLREYPESP 126



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 25/61 (40%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            ++ EY  AI    ++L  Y D    + A+  L  A+       +A + ++     YP+ 
Sbjct: 66  YQKKEYKTAIDSMSVLLKKYPDTPLKDMAIFWLARAHYKAGHQQDAAKYMAQFLREYPES 125

Query: 261 Y 261
            
Sbjct: 126 P 126



 Score = 38.6 bits (89), Expect = 0.95,   Method: Composition-based stats.
 Identities = 11/84 (13%), Positives = 30/84 (35%), Gaps = 8/84 (9%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y   +Y+ A       + +YP++   D   + +  ++ +            +   +YM++
Sbjct: 66  YQKKEYKTAIDSMSVLLKKYPDTPLKDMAIFWLARAHYKA--------GHQQDAAKYMAQ 117

Query: 165 IVERYTNSPYVKGARFYVTVGRNQ 188
            +  Y  SP        +    ++
Sbjct: 118 FLREYPESPLKATVEDGLLALADK 141


>gi|116751501|ref|YP_848188.1| TPR repeat-containing protein [Syntrophobacter fumaroxidans MPOB]
 gi|116700565|gb|ABK19753.1| Tetratricopeptide TPR_2 repeat protein [Syntrophobacter
           fumaroxidans MPOB]
          Length = 1057

 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 52/135 (38%), Gaps = 10/135 (7%)

Query: 75  KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
           +A E+F +C   +P + V   +    A    +  K+Q      E ++  YPES+      
Sbjct: 815 QAREWFLRCLNRYPLSPVVDHAAHYVAASYMTENKWQDLIDFYESFLAAYPESRIYPEAL 874

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
           Y +G + + + R        T +  +   + V  +  S     A   +    +    + +
Sbjct: 875 YEMGAAASLLGR--------TDVASRRYWQAVTFFPESERAGAAAARLVEISSP--GEIL 924

Query: 195 EIGRYYLKRGEYVAA 209
            + R Y  R ++ +A
Sbjct: 925 GVAREYYARKDFFSA 939



 Score = 45.9 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 42/155 (27%), Gaps = 30/155 (19%)

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD---VPYDQRATKLMLQYMSRIV 166
           Y +A    E      P   +               +                 ++  R +
Sbjct: 778 YHKALRAYERAEAGNPTHGD-------------DTLPGRTPATRPGTTMAQAREWFLRCL 824

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
            RY  SP             +  AA    +   Y+   ++   I  ++  LA Y ++   
Sbjct: 825 NRYPLSP-----------VVDH-AAH--YVAASYMTENKWQDLIDFYESFLAAYPESRIY 870

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            EA+  +  A   L   D A          +P+  
Sbjct: 871 PEALYEMGAAASLLGRTDVASRRYWQAVTFFPESE 905



 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 42/115 (36%), Gaps = 22/115 (19%)

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           + +YP S  VD+  + V  SY    +         + ++ +    +  Y  S     A +
Sbjct: 824 LNRYPLSPVVDHAAHYVAASYMTENK--------WQDLIDFYESFLAAYPESRIYPEALY 875

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
            +    + L   +V              A  R+   +  + ++E A  A ARLVE
Sbjct: 876 EMGAAASLLGRTDV--------------ASRRYWQAVTFFPESERAGAAAARLVE 916


>gi|325295455|ref|YP_004281969.1| hypothetical protein Dester_1275 [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065903|gb|ADY73910.1| Tetratricopeptide TPR_1 repeat-containing protein
           [Desulfurobacterium thermolithotrophum DSM 11699]
          Length = 597

 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 58/172 (33%), Gaps = 49/172 (28%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF--------------------- 102
             ++LKE+++ KA ++  +     P    A K  +   +                     
Sbjct: 239 GKIYLKEKDYKKAEKFLEKVLDKNPDNIYALK-EIFIIYLKQNKTNEALNVINRLVKLDP 297

Query: 103 -----------VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
                        +   +Y++   L E      P++ N   VY+++G++Y          
Sbjct: 298 YNLRLLSWVAASLFEMKEYKKVIPLIERITKLNPDNPN---VYFMLGLAYEMS------- 347

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
               +  L+   + ++ Y  +P V     ++    N+L+       + Y +R
Sbjct: 348 -GNYEKALEAYEKSLDLYPENPTVLEKTAFLLYKMNRLSD-----AKAYFER 393



 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 35/251 (13%), Positives = 90/251 (35%), Gaps = 36/251 (14%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
            +A   ++   ++ +   Y   ++    +      A L++ E+ + +A +   +  + +P
Sbjct: 136 LLAGISIIKGNKKEAERYYKRILSTAPDKSTYIMLANLYINEKKYLEAQKLLTEALKKYP 195

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
            +       L    V +  GK   A +  E+ I   P  ++    Y L+G  Y +     
Sbjct: 196 -SDFLINYFL--GEVSFLKGKINTARNYIEKAIKLNPNFES---AYVLLGKIYLK----- 244

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR-------YYL 201
              ++  K   +++ +++++  ++ Y      ++   +     + + +         Y L
Sbjct: 245 ---EKDYKKAEKFLEKVLDKNPDNIYALK-EIFIIYLKQNKTNEALNVINRLVKLDPYNL 300

Query: 202 KRGEYVAA----IPRFQLVL-------ANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
           +   +VAA    +  ++ V+           D  +       L  AY      ++A E  
Sbjct: 301 RLLSWVAASLFEMKEYKKVIPLIERITKLNPDNPNVY---FMLGLAYEMSGNYEKALEAY 357

Query: 251 SLIQERYPQGY 261
               + YP+  
Sbjct: 358 EKSLDLYPENP 368


>gi|310822253|ref|YP_003954611.1| social gliding motility protein tgl [Stigmatella aurantiaca
           DW4/3-1]
 gi|309395325|gb|ADO72784.1| Social gliding motility protein Tgl [Stigmatella aurantiaca
           DW4/3-1]
          Length = 250

 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 39/133 (29%), Gaps = 21/133 (15%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
               ++L +  + +A   + Q      +P   +A+       +  +  G   +A    + 
Sbjct: 105 NLGNVYLDQGRYDEAIRTYEQVLNDMLYPTPFIAQS---NLGWAYFKKGDTAKALENIKS 161

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR-ATKLMLQYMSRIVERYTNSPYVKGA 178
            +T  P                        YDQ   T+   +  SR  E   +   V  A
Sbjct: 162 AVTLNPN------------FCRGYQNLGFIYDQTGDTEEACRQFSRYREMCPD---VADA 206

Query: 179 RFYVTVGRNQLAA 191
                V + ++  
Sbjct: 207 YMREGVCQAKMGK 219


>gi|89053468|ref|YP_508919.1| hypothetical protein Jann_0977 [Jannaschia sp. CCS1]
 gi|88863017|gb|ABD53894.1| hypothetical protein Jann_0977 [Jannaschia sp. CCS1]
          Length = 281

 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 47/137 (34%), Gaps = 28/137 (20%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
            +++ Y++A L   E  F+ A   F      +P + ++       A   Y  G+   A  
Sbjct: 157 AEQQDYDRASLAFDEGRFADASVAFQTFVDTYPGSPLS-------ADAHYLRGE---AEV 206

Query: 116 LGEE-------YITQY---PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
             +        ++  +   P+          +G++ AQ+           +     +S +
Sbjct: 207 NLDRWNPAARAFLASFSAAPDGPRAPIALTSLGVALAQI--------GQPEEACLTLSEV 258

Query: 166 VERYTNSPYVKGARFYV 182
             RY  S  V  A+  +
Sbjct: 259 GVRYPGSASVADAQAEM 275



 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 39/128 (30%), Gaps = 20/128 (15%)

Query: 138 GMSYAQMIRDVPY-----DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
           G++ A+  +D        D+             V+ Y  SP    A       R      
Sbjct: 153 GLAVAEQ-QDYDRASLAFDEGRFADASVAFQTFVDTYPGSPLSADAH----YLRG----- 202

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           E E+         +  A   F    +   D   A  A+  L  A   +   +EA   +S 
Sbjct: 203 EAEV-----NLDRWNPAARAFLASFSAAPDGPRAPIALTSLGVALAQIGQPEEACLTLSE 257

Query: 253 IQERYPQG 260
           +  RYP  
Sbjct: 258 VGVRYPGS 265


>gi|281204170|gb|EFA78366.1| hypothetical protein PPL_09017 [Polysphondylium pallidum PN500]
          Length = 1421

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 7/82 (8%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL-MSAFVQYSAGKYQQAASL 116
             + ++A++   +Q++  A   F      +P      K+ L   A + Y A KY+ +   
Sbjct: 143 EALLQQALILYDKQSYKSALPLFENVLSLYPQ----EKTTLYKLADIYYQAKKYELSQKY 198

Query: 117 GEEYITQYPESKNVDYVYYLVG 138
            E  +  +  +K+ DY  YL+G
Sbjct: 199 IELALKYH--AKDKDYTLYLLG 218


>gi|120554521|ref|YP_958872.1| TPR repeat-containing protein [Marinobacter aquaeolei VT8]
 gi|120324370|gb|ABM18685.1| Tetratricopeptide TPR_2 repeat protein [Marinobacter aquaeolei VT8]
          Length = 939

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 11/75 (14%), Positives = 28/75 (37%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
              +Y++     +  + + A  +F +     P + +A K+   +A     A  +  A + 
Sbjct: 593 ASAIYQQGEKAARAGDATLAVAHFQRVEGVMPGSEIAIKARYDAANTLLRASDWLAAINE 652

Query: 117 GEEYITQYPESKNVD 131
            + +   YP  +   
Sbjct: 653 LQRFRIDYPSHELTP 667



 Score = 40.5 bits (94), Expect = 0.24,   Method: Composition-based stats.
 Identities = 13/113 (11%), Positives = 40/113 (35%), Gaps = 7/113 (6%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y+ A          ++     Q    +P + +  ++    A   +SAG+Y +A +   +
Sbjct: 135 LYQMAKAHALTGQPEQSIARLKQLVGLYPNSELVPEARFRIAEAAFSAGRYAEAEAGYRQ 194

Query: 120 YITQYPESKN-VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            +  +   +       Y++G S  +            +    + + + ++  +
Sbjct: 195 LLE-HDSHQELAAKARYMLGWSQFKQGN-----PAWARASASFTAVLDQQLPD 241



 Score = 35.5 bits (81), Expect = 8.5,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 34/115 (29%), Gaps = 15/115 (13%)

Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
            +  +  Q             L + +  R+      S     AR               +
Sbjct: 591 QLASAIYQQGEKAAR-AGDATLAVAHFQRVEGVMPGSEIAIKAR--------------YD 635

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
                L+  +++AAI   Q    +Y   E   E   +LV AY       +A E +
Sbjct: 636 AANTLLRASDWLAAINELQRFRIDYPSHELTPETSEKLVLAYQESGQGLKAAEEL 690


>gi|262372263|ref|ZP_06065542.1| conserved hypothetical protein [Acinetobacter junii SH205]
 gi|262312288|gb|EEY93373.1| conserved hypothetical protein [Acinetobacter junii SH205]
          Length = 287

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 47/120 (39%), Gaps = 17/120 (14%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG--EYVAA 209
           Q   K  +Q M   ++ + N  YV  A F++                +YL     +Y AA
Sbjct: 181 QGGAKKAIQPMQNFIKNHPNGIYVGNAYFWL--------------AEFYLAVEPVDYKAA 226

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVE-AYVALALMDEAREVVSLIQERYPQGYWARYVET 268
              + +V   Y ++  A  A+ +L   A         A +  + +  +YPQ   A++++ 
Sbjct: 227 KQNYNIVATRYPNSAKAPRAIYQLYSIAKEVDKNTALANQYKNKLISQYPQTEEAKFIQK 286



 Score = 40.9 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 46/132 (34%), Gaps = 9/132 (6%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG--K 109
           + +  ++  Y  A+   K+    KA +      ++ P       +    A    +     
Sbjct: 163 SQIELEKAAYTVALDAYKQGGAKKAIQPMQNFIKNHPNGIYVGNAYFWLAEFYLAVEPVD 222

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y+ A        T+YP S       Y +      + ++V    + T L  QY ++++ +Y
Sbjct: 223 YKAAKQNYNIVATRYPNSAKAPRAIYQL----YSIAKEVD---KNTALANQYKNKLISQY 275

Query: 170 TNSPYVKGARFY 181
             +   K  +  
Sbjct: 276 PQTEEAKFIQKK 287



 Score = 39.3 bits (91), Expect = 0.62,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 47/145 (32%), Gaps = 31/145 (21%)

Query: 95  KSLLMSAFVQ------YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
           +  L  A         Y  G  ++A    + +I  +P    V   Y+ +   +   +  V
Sbjct: 164 QIELEKA-AYTVALDAYKQGGAKKAIQPMQNFIKNHPNGIYVGNAYFWLA-EFYLAVEPV 221

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
            Y     K   Q  + +  RY NS     A + +             I +   +  +  A
Sbjct: 222 DY-----KAAKQNYNIVATRYPNSAKAPRAIYQL-----------YSIAK---EVDKNTA 262

Query: 209 AIPRFQL-VLANYSDAEHAEEAMAR 232
              +++  +++ Y      EEA   
Sbjct: 263 LANQYKNKLISQYPQT---EEAKFI 284


>gi|115379501|ref|ZP_01466595.1| tetratricopeptide repeat domain protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|115363479|gb|EAU62620.1| tetratricopeptide repeat domain protein [Stigmatella aurantiaca
           DW4/3-1]
          Length = 212

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 37/139 (26%), Gaps = 22/139 (15%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +    A      G  +      + +  Q P   + D   Y  G+    +I     D    
Sbjct: 92  AEFEQAVAALRTGNVEAGVVRLQAFAEQNPRHAHADNALYFSGL---GLIGLKDLD---- 144

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
               +   R++  Y     V      +   R              LK  +   A   +  
Sbjct: 145 -GASRLFERLINNYPAGDAVLDGMLRLAECR--------------LKLKQPEDARALYTR 189

Query: 216 VLANYSDAEHAEEAMARLV 234
           V+  +     A +A  RL 
Sbjct: 190 VITQFPGTAAATQAEQRLA 208



 Score = 42.0 bits (98), Expect = 0.092,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 27/77 (35%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           +         +Y   +  +  ++   A   F +   ++P        +L  A  +    +
Sbjct: 120 NPRHAHADNALYFSGLGLIGLKDLDGASRLFERLINNYPAGDAVLDGMLRLAECRLKLKQ 179

Query: 110 YQQAASLGEEYITQYPE 126
            + A +L    ITQ+P 
Sbjct: 180 PEDARALYTRVITQFPG 196



 Score = 39.3 bits (91), Expect = 0.57,   Method: Composition-based stats.
 Identities = 19/146 (13%), Positives = 39/146 (26%), Gaps = 8/146 (5%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
             +  D       +       +E+AV  L+  N           +   P    A  +L  
Sbjct: 73  SSAPADAPASEPVNTALLDAEFEQAVAALRTGNVEAGVVRLQAFAEQNPRHAHADNALYF 132

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
           S            A+ L E  I  YP    V        +     + +     +  +   
Sbjct: 133 SGLGLIGLKDLDGASRLFERLINNYPAGDAV--------LDGMLRLAECRLKLKQPEDAR 184

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVG 185
              +R++ ++  +     A   +   
Sbjct: 185 ALYTRVITQFPGTAAATQAEQRLASL 210


>gi|256828286|ref|YP_003157014.1| tol-pal system protein YbgF [Desulfomicrobium baculatum DSM 4028]
 gi|256577462|gb|ACU88598.1| tol-pal system protein YbgF [Desulfomicrobium baculatum DSM 4028]
          Length = 350

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 50/137 (36%), Gaps = 11/137 (8%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
              + Y +A+   +    + A E F    R+FP   +   +L  +    Y+  +Y +A  
Sbjct: 215 SPEQEYARALKSYQNGRHALAREQFAAFMRNFPRHRLLPNALYWTGETWYAEARYDRAMK 274

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP-- 173
              + +  +P          L  ++Y+ +       Q   +    Y+ ++  RY +SP  
Sbjct: 275 YFTQVVQDHPRHGKSADAL-LK-LAYSALR------QGQHEQAGVYLQQLEVRYPDSPAS 326

Query: 174 -YVKGARFYVTVGRNQL 189
              + AR  +      +
Sbjct: 327 RLGRQARGRIQGCSEFI 343



 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/123 (13%), Positives = 37/123 (30%), Gaps = 22/123 (17%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y  G++  A      ++  +P  + +    Y  G ++    R            ++Y ++
Sbjct: 227 YQNGRHALAREQFAAFMRNFPRHRLLPNALYWTGETWYAEAR--------YDRAMKYFTQ 278

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +V+ +        A   +     +    E      YL            Q +   Y D+ 
Sbjct: 279 VVQDHPRHGKSADALLKLAYSALRQGQHEQ--AGVYL------------QQLEVRYPDSP 324

Query: 225 HAE 227
            + 
Sbjct: 325 ASR 327



 Score = 40.1 bits (93), Expect = 0.33,   Method: Composition-based stats.
 Identities = 18/138 (13%), Positives = 44/138 (31%), Gaps = 25/138 (18%)

Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
           S   +Y      +   Q  R          L  +  +  +  +     +  A ++     
Sbjct: 215 SPEQEYA---RALKSYQNGRHA--------LAREQFAAFMRNFPRHRLLPNALYW----- 258

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
                     G  +     Y  A+  F  V+ ++     + +A+ +L  + +     ++A
Sbjct: 259 ---------TGETWYAEARYDRAMKYFTQVVQDHPRHGKSADALLKLAYSALRQGQHEQA 309

Query: 247 REVVSLIQERYPQGYWAR 264
              +  ++ RYP    +R
Sbjct: 310 GVYLQQLEVRYPDSPASR 327


>gi|254428223|ref|ZP_05041930.1| tetratricopeptide repeat domain protein [Alcanivorax sp. DG881]
 gi|196194392|gb|EDX89351.1| tetratricopeptide repeat domain protein [Alcanivorax sp. DG881]
          Length = 970

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/253 (15%), Positives = 82/253 (32%), Gaps = 38/253 (15%)

Query: 30  IAVCFLVGWERQSSRDVYLDSVTDVRYQREV--------------YEKAVLFLKEQNFSK 75
           +A+  L G    +  D  +D  T ++  +E+              Y  +  +  + +  K
Sbjct: 123 LALLDLAGTMSPTLADEDVDYSTAIQLYQELLNSTNDANERAEAYYLLSKAYAMDGDLDK 182

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A    +     +P +  A +S      + +S G Y+ A     + I +   ++  +   Y
Sbjct: 183 ARSSLDSLVEQYPNSEWALESQFRRGEMLFSEGDYEYAEKAYADVIERGERNEFYNQALY 242

Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIV----------ERYTNSPYVKGA------- 178
             G SY ++  +    Q +   +L  ++             + + ++  V          
Sbjct: 243 KHGWSYYKL-GEYERAQDSFFTLLDNLNGQAVLADNTSMESKLFVDTQRVVSLSFSNLNG 301

Query: 179 --RFYVTVGRNQLAAKEVEI----GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
                    RN     E  I    G  YL +  +  A   + + +  Y D+  A E    
Sbjct: 302 AKSVKAWFARNGNRDYEPAIYRTLGDVYLNQERFRDAAETYDMFVQVYPDSRLAPEFSTL 361

Query: 233 LVEAYVALALMDE 245
            +E+Y        
Sbjct: 362 QIESYQKGGFPTL 374



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 20/58 (34%), Positives = 30/58 (51%)

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
           Y  AI  +Q +L + +DA    EA   L +AY     +D+AR  +  + E+YP   WA
Sbjct: 143 YSTAIQLYQELLNSTNDANERAEAYYLLSKAYAMDGDLDKARSSLDSLVEQYPNSEWA 200


>gi|158521061|ref|YP_001528931.1| hypothetical protein Dole_1044 [Desulfococcus oleovorans Hxd3]
 gi|158509887|gb|ABW66854.1| hypothetical protein Dole_1044 [Desulfococcus oleovorans Hxd3]
          Length = 318

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 40/99 (40%), Gaps = 14/99 (14%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             +      +  + +    + +R              ++I R +LK G+  AA+ RF+ +
Sbjct: 49  RAVTAYETFLYFFPDHEQTEYSR--------------LQIARAFLKTGKTEAALERFEKI 94

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
            +  S  +   EA       Y AL + D A  ++SL+ E
Sbjct: 95  YSEGSGTQFQVEAGFMAARCYTALGMKDRALSMLSLVGE 133



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 18/61 (29%), Gaps = 3/61 (4%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              F K   + +A   +      FP       S L  A      GK + A    E +   
Sbjct: 38  GDHFFKSGEYDRAVTAYETFLYFFPDHEQTEYSRLQIARAFLKTGKTEAAL---ERFEKI 94

Query: 124 Y 124
           Y
Sbjct: 95  Y 95


>gi|254460928|ref|ZP_05074344.1| hypothetical protein RB2083_1519 [Rhodobacterales bacterium
           HTCC2083]
 gi|206677517|gb|EDZ42004.1| hypothetical protein RB2083_1519 [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 281

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/132 (12%), Positives = 46/132 (34%), Gaps = 14/132 (10%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           ++  ++ A + +   + + A   F   ++++P + +  ++ L       ++G    A   
Sbjct: 158 EQADFDAANVLMTSGDAAGAAAQFGLFTQNYPGSPLEGQARLKQGEAHEASGD---AREA 214

Query: 117 GEEYITQY---PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
              Y+  Y   P S+      Y +G +  ++                 +  +  R+  + 
Sbjct: 215 ARAYLEAYSRDPSSEIAPDALYRLGRTLGRL--------GKVSEACVTLGEVDVRHPGTL 266

Query: 174 YVKGARFYVTVG 185
               A+  +T  
Sbjct: 267 AASEAQAEMTTL 278


>gi|189424078|ref|YP_001951255.1| hypothetical protein Glov_1012 [Geobacter lovleyi SZ]
 gi|189420337|gb|ACD94735.1| hypothetical protein Glov_1012 [Geobacter lovleyi SZ]
          Length = 432

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 33/72 (45%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++ +A    + +++  + +  +Q  + FP + +   SLLM A  QY +G    AA    +
Sbjct: 38  LFMEAFTAFQGKDYLHSIDKLHQMEQLFPDSPLRDVSLLMLARAQYRSGDNDNAAQTILK 97

Query: 120 YITQYPESKNVD 131
           +  ++      D
Sbjct: 98  FNKEFGNGPLAD 109


>gi|58698208|ref|ZP_00373129.1| TPR domain protein [Wolbachia endosymbiont of Drosophila ananassae]
 gi|225630870|ref|YP_002727661.1| TPR domain protein [Wolbachia sp. wRi]
 gi|58535289|gb|EAL59367.1| TPR domain protein [Wolbachia endosymbiont of Drosophila ananassae]
 gi|225592851|gb|ACN95870.1| TPR domain protein [Wolbachia sp. wRi]
          Length = 291

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 35/92 (38%), Gaps = 6/92 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYE---KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
            S    +    +     ++Y    KA    +  +   A    NQ    FP+    + +L+
Sbjct: 76  KSDKFNIKIAQNSGKSFDIYSTLKKAKDSFESGDNETAISLLNQIIAKFPYH---KNALI 132

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
               + Y+  +Y++A  +    + ++P +  +
Sbjct: 133 GLGNIYYANKEYKKAVEIYTRLLKEHPSNPYI 164


>gi|99035109|ref|ZP_01314895.1| hypothetical protein Wendoof_01000269 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 291

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 35/92 (38%), Gaps = 6/92 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYE---KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
            S    +    +     ++Y    KA    +  +   A    NQ    FP+    + +L+
Sbjct: 76  KSDKFNIKIAQNSGKSFDIYSTLKKAKDSFESGDNETAISLLNQIIAKFPYH---KNALI 132

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
               + Y+  +Y++A  +    + ++P +  +
Sbjct: 133 GLGNIYYANKEYKKAVEIYTRLLKEHPSNPYI 164


>gi|42521001|ref|NP_966916.1| TPR domain-containing protein [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|42410742|gb|AAS14850.1| TPR domain protein [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 291

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 35/92 (38%), Gaps = 6/92 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYE---KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
            S    +    +     ++Y    KA    +  +   A    NQ    FP+    + +L+
Sbjct: 76  KSDKFNIKIAQNSGKSFDIYSTLKKAKDSFESGDNETAISLLNQIIAKFPYH---KNALI 132

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
               + Y+  +Y++A  +    + ++P +  +
Sbjct: 133 GLGNIYYANKEYKKAVEIYTRLLKEHPSNPYI 164


>gi|58697396|ref|ZP_00372714.1| TPR domain protein [Wolbachia endosymbiont of Drosophila simulans]
 gi|58536197|gb|EAL59768.1| TPR domain protein [Wolbachia endosymbiont of Drosophila simulans]
          Length = 267

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 35/92 (38%), Gaps = 6/92 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYE---KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
            S    +    +     ++Y    KA    +  +   A    NQ    FP+    + +L+
Sbjct: 52  KSDKFNIKIAQNSGKSFDIYSTLKKAKDSFESGDNETAISLLNQIIAKFPYH---KNALI 108

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
               + Y+  +Y++A  +    + ++P +  +
Sbjct: 109 GLGNIYYANKEYKKAVEIYTRLLKEHPSNPYI 140


>gi|258592131|emb|CBE68436.1| protein of unknown function [NC10 bacterium 'Dutch sediment']
          Length = 235

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 59/162 (36%), Gaps = 25/162 (15%)

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
              +     +P    A ++ L      Y+ GKY +A +    Y+ + P          L+
Sbjct: 94  RLLHDVVHRYPGTAAAAEATLRLGTYYYTVGKYNEARTAYTTYLEKNPRG--------LI 145

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             S    + D    +R     ++  SR++E++   P +  A+              + + 
Sbjct: 146 AFSAGLGVGDTYLAERNNDKAVETYSRLIEQFAQEPLLPEAQ--------------LHLA 191

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           R Y   G    A   ++ ++A + +   A+ A     E+Y +
Sbjct: 192 RAYRGMGRLKDAGALYEQIVATHPNTGWAQRA---QAESYRS 230



 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 44/166 (26%), Gaps = 37/166 (22%)

Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
                 +    +I     D       L+ +  +V RY  +     A          L   
Sbjct: 67  ALLRKAVGQLDVILRSGSDDAKQTEGLRLLHDVVHRYPGTAAAAEATLR-------LGTY 119

Query: 193 EVEIGRYYLKRGEYVA------------------------------AIPRFQLVLANYSD 222
              +G+Y   R  Y                                A+  +  ++  ++ 
Sbjct: 120 YYTVGKYNEARTAYTTYLEKNPRGLIAFSAGLGVGDTYLAERNNDKAVETYSRLIEQFAQ 179

Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
                EA   L  AY  +  + +A  +   I   +P   WA+  + 
Sbjct: 180 EPLLPEAQLHLARAYRGMGRLKDAGALYEQIVATHPNTGWAQRAQA 225



 Score = 39.7 bits (92), Expect = 0.38,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 28/63 (44%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              +L E+N  KA E +++    F    +  ++ L  A      G+ + A +L E+ +  
Sbjct: 154 GDTYLAERNNDKAVETYSRLIEQFAQEPLLPEAQLHLARAYRGMGRLKDAGALYEQIVAT 213

Query: 124 YPE 126
           +P 
Sbjct: 214 HPN 216


>gi|224370792|ref|YP_002604956.1| TPR repeat family protein [Desulfobacterium autotrophicum HRM2]
 gi|223693509|gb|ACN16792.1| TPR repeat family protein [Desulfobacterium autotrophicum HRM2]
          Length = 850

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 43/129 (33%), Gaps = 16/129 (12%)

Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
            YYL    YA ++   P D RA    +      +  Y +SP +  A   + +   +L   
Sbjct: 266 AYYLRA--YAALMTADPEDSRANLTAMAAFQDALVAYPDSPLLPFALAGLGIVHTRL--- 320

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
                          AA   F ++  +Y D     + +  L   Y A    D+A      
Sbjct: 321 -----------KNPAAAEGFFAIIRDHYRDYPGLAQVLYHLGLIYDAKGYNDQALAYFKE 369

Query: 253 IQERYPQGY 261
           + E  P+  
Sbjct: 370 VFEDLPENS 378



 Score = 44.0 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 65/218 (29%), Gaps = 30/218 (13%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV-ARKSLLMSAF 102
           ++V+ D   +               K++ +  + +   +  +  P     + + LL    
Sbjct: 368 KEVFEDLPENSSVVDAGIGIGKALFKKRFYLDSLKILTELIKSNPEKTYDSPELLLSIGR 427

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             +  GK   A       +  +P+    D       M  A +      D +  K      
Sbjct: 428 SSFELGKTANARENFMRVLNLFPDIPGKD-------MILADIAETYAVD-KDNKRAESVY 479

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKE--------------------VEIGRYYLK 202
             +++ Y        +   + +    +A K+                    + +   Y K
Sbjct: 480 RLVIKTYPGGEGFLNSSMGLALLVTDMAEKKAIYEMVKRDFTDHILAGVAMMRLAEIYEK 539

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
            G Y   I   + +LA +       EA+  +  AY AL
Sbjct: 540 EGAYADCIKEIENLLATHPQ-GLRYEAVKLMQRAYEAL 576



 Score = 40.5 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 66/239 (27%), Gaps = 46/239 (19%)

Query: 57  QREVYEKAVLFLKEQNFSK------AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
           +   Y +A   L   +         A   F      +P + +   +L     V       
Sbjct: 264 EPAYYLRAYAALMTADPEDSRANLTAMAAFQDALVAYPDSPLLPFALAGLGIVHTRLKNP 323

Query: 111 QQAASLGEEY---ITQYPES-KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
               +  E +   I  +      +  V Y +G+ Y                 L Y   + 
Sbjct: 324 ----AAAEGFFAIIRDHYRDYPGLAQVLYHLGLIYDAK--------GYNDQALAYFKEVF 371

Query: 167 ERYTNSPYVKGA---------RFY--------VTVGRNQLAAK-----E--VEIGRYYLK 202
           E    +  V  A         +          +T        K     E  + IGR   +
Sbjct: 372 EDLPENSSVVDAGIGIGKALFKKRFYLDSLKILTELIKSNPEKTYDSPELLLSIGRSSFE 431

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            G+   A   F  VL  + D    +  +A + E Y        A  V  L+ + YP G 
Sbjct: 432 LGKTANARENFMRVLNLFPDIPGKDMILADIAETYAVDKDNKRAESVYRLVIKTYPGGE 490


>gi|289548835|ref|YP_003473823.1| hypothetical protein Thal_1064 [Thermocrinis albus DSM 14484]
 gi|289182452|gb|ADC89696.1| Tetratricopeptide TPR_2 repeat protein [Thermocrinis albus DSM
           14484]
          Length = 538

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 67/195 (34%), Gaps = 32/195 (16%)

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           +  +     +     + + LL+ A       +Y +A  L +      P++  + Y  YL+
Sbjct: 96  KAMSALEEGYRVVPDSPQILLLLADEYMRRSQYDKATPLLQRLSELNPQNP-LPY--YLL 152

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
              Y          Q   K  ++Y+ + +                       A   + +G
Sbjct: 153 ARLYMA--------QGDQKKAIEYLEKSLRVKPTFE----------------AGF-ITLG 187

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
             Y  RGE   A   ++ +L    +      A+ RL   Y +    +EA+E    + + Y
Sbjct: 188 GLYESRGELSKAETLYKSILEKDPNNRV---ALERLASLYASSGRWEEAKETYRKLIDLY 244

Query: 258 PQGYW-ARYVETLVK 271
           P   +  +Y   L+K
Sbjct: 245 PDSGYQYQYALVLIK 259


>gi|282163495|ref|YP_003355880.1| hypothetical protein MCP_0825 [Methanocella paludicola SANAE]
 gi|282155809|dbj|BAI60897.1| conserved hypothetical protein [Methanocella paludicola SANAE]
          Length = 192

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 24/68 (35%), Gaps = 1/68 (1%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA-YVALALMDEAREVVSLIQERYPQ 259
            K  ++  A   F  V   + D+E A EA+     A Y       +  +    +  +YP 
Sbjct: 121 FKNKDWDRAERCFNSVAERFPDSEEAPEALYYTGVARYEKTHDATDLADTSKKLNAKYPN 180

Query: 260 GYWARYVE 267
             W +   
Sbjct: 181 SSWTKKAS 188



 Score = 44.3 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 29/80 (36%), Gaps = 5/80 (6%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                    ++ +     K +++ +A   FN  +  FP +  A ++L  +   +Y   K 
Sbjct: 104 PPGDFCAEMLFAEGRAAFKNKDWDRAERCFNSVAERFPDSEEAPEALYYTGVARY--EKT 161

Query: 111 QQAASLGEEYITQ---YPES 127
             A  L +        YP S
Sbjct: 162 HDATDLADTSKKLNAKYPNS 181


>gi|148658023|ref|YP_001278228.1| hypothetical protein RoseRS_3925 [Roseiflexus sp. RS-1]
 gi|148570133|gb|ABQ92278.1| Tetratricopeptide TPR_2 repeat protein [Roseiflexus sp. RS-1]
          Length = 1180

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/208 (12%), Positives = 47/208 (22%), Gaps = 35/208 (16%)

Query: 57   QREVYEKAVLFLKEQNFSKAYE-YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
                +  A           A                 A  +LL    +    G   +A  
Sbjct: 994  PEAYFGLAQAEYGAGRIEDALRNATRALELR---PRYAEAALL-LGKIYERQGYSMRALE 1049

Query: 116  LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
              +  I   P    +   +Y   +   +  R             + +        N    
Sbjct: 1050 AYKRAIDINPR---LAEPHYRRALLLIRADR--------LNEAREELEVATRLDPN---- 1094

Query: 176  KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
                          A     +GR Y  +    AA+ RF+  +          EA      
Sbjct: 1095 -------------FAEAHYWLGRVYFAQRNIQAALNRFREAVNR--QGGAYPEARYYQGL 1139

Query: 236  AYVALALMDEAREVVSLIQERYPQGYWA 263
            A   L  ++ A      +  +     WA
Sbjct: 1140 AEEQLGDLNAAIRSFETVANQSDDTPWA 1167


>gi|310823716|ref|YP_003956074.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309396788|gb|ADO74247.1| Tetratricopeptide repeat domain protein [Stigmatella aurantiaca
           DW4/3-1]
          Length = 370

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/114 (11%), Positives = 34/114 (29%), Gaps = 22/114 (19%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQ-------------------REVYEKAVLFLK 69
            + +  L G     S           R++                    E++        
Sbjct: 1   MVGLLGLAGCRTTGSGARQETPAPATRHEVEFEPVTVTGDLELERLNDEELFAGGTSAFA 60

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
            ++F +A  YF + +   P +   R++L  +        ++++A    + +   
Sbjct: 61  AEDFKQAARYFGRLADFHPQSSHRRQALYNAGLAHQRLKEWEEA---YQRFSEL 111



 Score = 35.5 bits (81), Expect = 8.1,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 35/102 (34%), Gaps = 14/102 (13%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K   +Y  R+ + +  S + + A +   +   +L               E+  A  R
Sbjct: 62  EDFKQAARYFGRLADFHPQSSHRRQALYNAGLAHQRL--------------KEWEEAYQR 107

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
           F  +    +    A +A  RL E    L   +EA   + ++ 
Sbjct: 108 FSELADAAAGQGEALDAAFRLAETQYHLERFEEAAAQLRVLA 149


>gi|332992287|gb|AEF02342.1| type IV pilus biogenesis/stability protein PilW [Alteromonas sp.
           SN2]
          Length = 342

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 41/273 (15%), Positives = 82/273 (30%), Gaps = 54/273 (19%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           I    AV FL G    S    Y  +       +      + +LK  N+ +A    +Q   
Sbjct: 3   IGLIAAVIFLAGCVSNSQPGSYNSNFDRQEAAKTRMSLGLTYLKNNNYKQAKVNLDQALE 62

Query: 86  DFPFAGVARKSLLMSAFVQYSA--GKYQQAASLGEEYITQYPESKNV------------D 131
             P     R + +  A   Y    G  ++A  L +  ++  P + ++            D
Sbjct: 63  YDP-----RSAEVNYAIAYYYQLVGDVKRADDLYQTAMSLAPYNGDIANSYGAFKCQDGD 117

Query: 132 Y----VYYLVGMSYAQMIRDVP---------YDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           Y     Y+L  +S  Q                 Q      + Y    ++           
Sbjct: 118 YEDAKEYFLKAVSNQQYANSAETYENLALCAQSQGNVDDAITYFQSALKHQP-------L 170

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD-AEHAEEAMARLVEAY 237
           R             E+ I        ++ +A    +  L  Y   A+ + +++    E +
Sbjct: 171 RAKSLYLLT-----ELYIA-----TEQWTSA----KYTLDKYQRVAKPSPDSLWLSFEIH 216

Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLV 270
                 + A+EV   +   +P   +    + ++
Sbjct: 217 QGTNDWEGAKEVGYKLSTLFPDSPYTADYKNIL 249


>gi|323699326|ref|ZP_08111238.1| cell wall hydrolase/autolysin [Desulfovibrio sp. ND132]
 gi|323459258|gb|EGB15123.1| cell wall hydrolase/autolysin [Desulfovibrio desulfuricans ND132]
          Length = 600

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 45/144 (31%), Gaps = 18/144 (12%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQ 112
           + + A       N+ K  E F+ C +  P    A K+L     V    G        +++
Sbjct: 49  LVKDARKAKYRSNWQKVEETFSLCLKTAPNGPYAPKALYYIGRVYEELGAQSGLKSDFRK 108

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A       + +YP     D   +     YA+ + +       T      ++ I+  Y  S
Sbjct: 109 AVDYYGRVLARYPRHGWADDCLFRRADVYARRLNE-------TTAARLDLATIIVDYPRS 161

Query: 173 PYVKGARFYVTVGRNQLAAKEVEI 196
                 R        +L   +  +
Sbjct: 162 ----DMRAKADAALKRLGKYQWAV 181



 Score = 42.8 bits (100), Expect = 0.055,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 44/128 (34%), Gaps = 22/128 (17%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE------ 205
           +   + + +  S  ++   N PY   A                 IGR Y + G       
Sbjct: 59  RSNWQKVEETFSLCLKTAPNGPYAPKAL--------------YYIGRVYEELGAQSGLKS 104

Query: 206 -YVAAIPRFQLVLANYSDAEHAEEAMARLVEAY-VALALMDEAREVVSLIQERYPQGYWA 263
            +  A+  +  VLA Y     A++ + R  + Y   L     AR  ++ I   YP+    
Sbjct: 105 DFRKAVDYYGRVLARYPRHGWADDCLFRRADVYARRLNETTAARLDLATIIVDYPRSDMR 164

Query: 264 RYVETLVK 271
              +  +K
Sbjct: 165 AKADAALK 172


>gi|157872758|ref|XP_001684907.1| hypothetical protein [Leishmania major strain Friedlin]
 gi|68127977|emb|CAJ06696.1| conserved hypothetical protein [Leishmania major strain Friedlin]
          Length = 847

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/226 (12%), Positives = 59/226 (26%), Gaps = 41/226 (18%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           + ++ +A    K  N+++A E +          PF                  G + +A 
Sbjct: 444 KALFNRAFCEDKLMNYTRAIEDYTAALDLDPRNPFTHY------NLGISYDHKGNHARAT 497

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
                 I       +           +          Q A    +   +  V        
Sbjct: 498 QAFTRAIELDDRHPD-----------FYHNRGFTQRKQGAYAAAIADYTTAVSLDPKH-- 544

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRY-------------YLKRGEYVAAIPRFQLVLANYS 221
              + +      ++L   E  +  Y             Y  RG  +A + R +  + +++
Sbjct: 545 -FKSHYNRAYCFSKLGRYEEAVADYAAALQIDSNNANAYHNRGAALAQLGRLEAAVEDFN 603

Query: 222 DA----EHAEEAMARLVEAYVALALMDEA-REVVSLIQERYPQGYW 262
            A         A+      Y  L   D+A  +    I+       W
Sbjct: 604 RALRLNPKLTFALNARGLVYDQLQQYDKALADFTEAIRLDQRNSAW 649



 Score = 39.7 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 63/223 (28%), Gaps = 56/223 (25%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY-------SAGKYQQA 113
           Y +A  F K   + +A   +            A +    +A   +         G+ + A
Sbjct: 549 YNRAYCFSKLGRYEEAVADYAA----------ALQIDSNNANAYHNRGAALAQLGRLEAA 598

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY-TNS 172
                  +   P    + +     G+ Y Q+        +     L   +  +     NS
Sbjct: 599 VEDFNRALRLNP---KLTFALNARGLVYDQL--------QQYDKALADFTEAIRLDQRNS 647

Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRY-------------YLKR-------GEYVAAIPR 212
            ++             +   E+ I  Y             Y  R       G Y AAI  
Sbjct: 648 AWLHNRG----YTYRNMGKLELAIADYSASIKLAPHSHTAYTNRAFAFRKLGRYEAAIED 703

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQ 254
           +   L  +     A + +      +  L L ++A R+   ++ 
Sbjct: 704 YTKALREHPGV--ATKVLNNRAYCFARLNLFEDAIRDYTEVLA 744


>gi|85713386|ref|ZP_01044393.1| Uncharacterized conserved protein, contains TPR repeats [Idiomarina
           baltica OS145]
 gi|85692792|gb|EAQ30783.1| Uncharacterized conserved protein, contains TPR repeats [Idiomarina
           baltica OS145]
          Length = 261

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 53/128 (41%), Gaps = 9/128 (7%)

Query: 56  YQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
            + + Y+KA+   L+++ +  A   F    ++FP +     +      + Y+  +YQ+A 
Sbjct: 139 SENDAYDKAIALVLEDKRYDAAIPAFESFLQNFPNSTYVPNAHYWLGQLLYAQQEYQKAH 198

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
              ++ +  YP+S         +G+  A+        Q  T     +  +++  Y++S  
Sbjct: 199 DHFKQVVDNYPDSNKRADCLLKLGVIAAE--------QGKTADAKTFYQQVLTEYSDSTE 250

Query: 175 VKGARFYV 182
              A+  +
Sbjct: 251 ANLAKQRL 258



 Score = 40.5 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 2/68 (2%)

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
             Y AAIP F+  L N+ ++ +   A   L +   A     +A +    + + YP     
Sbjct: 155 KRYDAAIPAFESFLQNFPNSTYVPNAHYWLGQLLYAQQEYQKAHDHFKQVVDNYPDSN-- 212

Query: 264 RYVETLVK 271
           +  + L+K
Sbjct: 213 KRADCLLK 220



 Score = 38.6 bits (89), Expect = 0.95,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 14/104 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             +      ++ + NS YV  A +++                    + EY  A   F+ V
Sbjct: 159 AAIPAFESFLQNFPNSTYVPNAHYWLGQLL--------------YAQQEYQKAHDHFKQV 204

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           + NY D+    + + +L           +A+     +   Y   
Sbjct: 205 VDNYPDSNKRADCLLKLGVIAAEQGKTADAKTFYQQVLTEYSDS 248


>gi|284106837|ref|ZP_06386280.1| TPR repeat-containing protein [Candidatus Poribacteria sp. WGA-A3]
 gi|283830016|gb|EFC34292.1| TPR repeat-containing protein [Candidatus Poribacteria sp. WGA-A3]
          Length = 351

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 70/236 (29%), Gaps = 39/236 (16%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L    SI V             +  D        + ++ +       Q F +A +   Q 
Sbjct: 5   LLRIMSIGVLGFTLCLAGPLTSLAADE------AQNLFNQGASHANNQEFQQAAKSLQQA 58

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
              FP    A    L+         +  QA +  ++ +  +P   N    Y+ +G+ Y  
Sbjct: 59  LDVFP--RFAAAHHLLGVVSFTGLQQPDQAVTHLKKAVELHP---NFARAYFDLGLVYQH 113

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
                   Q+        + + +E Y        A+  +    +QL  +E  I       
Sbjct: 114 --------QKNLDAAATVLKKAIEIYPR---FADAQLNLAFAYDQLGDREQAI------- 155

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
             Y AA+                  A+  L   Y      D+A + +  +  + PQ
Sbjct: 156 SAYQAALK----------MDPSQLTALFNLATLYDMQGDTDQAMKELQTLTSQDPQ 201



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 68/195 (34%), Gaps = 47/195 (24%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
            R  ++  +++  ++N   A     +    +P    A  + L  AF     G  +QA S 
Sbjct: 101 ARAYFDLGLVYQHQKNLDAAATVLKKAIEIYP--RFA-DAQLNLAFAYDQLGDREQAISA 157

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            +  +   P          L  +     + D+   Q  T   ++ +  +      S   +
Sbjct: 158 YQAALKMDPSQ--------LTALFNLATLYDM---QGDTDQAMKELQTL-----TSQDPQ 201

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR---L 233
            A+ ++ +   QLA K +                   +  +  Y      E+A+     L
Sbjct: 202 DAKAWLLLA--QLAEKSLS-----------------EKQAIEAY------EKALGISPDL 236

Query: 234 VEAYVALALMDEARE 248
           +EA+ AL  + +A++
Sbjct: 237 LEAHYALGYLMQAQD 251


>gi|218781539|ref|YP_002432857.1| branched-chain amino acid ABC transporter periplasmic protein
           [Desulfatibacillum alkenivorans AK-01]
 gi|218762923|gb|ACL05389.1| Extracellular ligand-binding receptor [Desulfatibacillum
           alkenivorans AK-01]
          Length = 668

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 39/104 (37%), Gaps = 2/104 (1%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L I   +A     G +    +          R   +++ KA      + ++ A   + Q 
Sbjct: 13  LLIAVLLAATSCGGKKILPGKSTRP--AATQRGDEQLFAKAEKMYAAKQYAYAERLYQQY 70

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
              +P + +A  + L  A +     KY++A     + + +YP S
Sbjct: 71  LTKYPRSALAPAAWLQIAQMAVDNQKYEKARDAYRKILAKYPAS 114



 Score = 49.0 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 55/142 (38%), Gaps = 22/142 (15%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y+A +Y  A  L ++Y+T+YP S      +          I  +  D +  +       +
Sbjct: 55  YAAKQYAYAERLYQQYLTKYPRSALAPAAW--------LQIAQMAVDNQKYEKARDAYRK 106

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           I+ +Y  S  V  AR                I   Y K   Y A IP  + + ++   A+
Sbjct: 107 ILAKYPASAMVTDAR--------------WGILNTYYKEERYEALIPMLRQMASSSKTAQ 152

Query: 225 HAEEAMARLVEAYVALALMDEA 246
               A++ L + Y++    ++A
Sbjct: 153 ERVRALSLLGDVYMSWGEAEKA 174


>gi|225010576|ref|ZP_03701047.1| Tetratricopeptide TPR_2 repeat protein [Flavobacteria bacterium
           MS024-3C]
 gi|225005405|gb|EEG43356.1| Tetratricopeptide TPR_2 repeat protein [Flavobacteria bacterium
           MS024-3C]
          Length = 1001

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 50/148 (33%), Gaps = 11/148 (7%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
              ++ +A+      N +K        S  FP      K  L     + +  +  +A + 
Sbjct: 574 PYALFNEAMAQGLNGNTAKKIALLVSFSTRFPGHSYLPKVYLELGLSEAAQERNSEAITY 633

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS---P 173
            +  I ++P S  +       G+    + +            L+ +  +V R+  S    
Sbjct: 634 FDLLIKEFPNSDLLPQAMLRKGLLQFNLSQ--------ADASLKTLQDLVNRFPKSASFS 685

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYL 201
               A   + + + +L+     +G++ L
Sbjct: 686 QAVSAAKRIYIDQGRLSDYRKWVGQFNL 713



 Score = 44.3 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 73/206 (35%), Gaps = 32/206 (15%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR------KSLLMSAFVQYSAGKYQQAA 114
           Y+K   F K + F+K+   F Q         +        ++ L  A   YS+G++ +A 
Sbjct: 502 YQKGYAFFKTKEFTKSITAFKQFISQ--TQSMTELETERNQAALRIADAYYSSGQFSKAI 559

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
           S       + P+   V Y  +   M+              T   +  +     R+    Y
Sbjct: 560 SSYVSVAREQPQ--AVPYALFNEAMAQGLN--------GNTAKKIALLVSFSTRFPGHSY 609

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
           +     Y+ +G ++ A                  AI  F L++  + +++   +AM R  
Sbjct: 610 LPKV--YLELGLSEAAQ------------ERNSEAITYFDLLIKEFPNSDLLPQAMLRKG 655

Query: 235 EAYVALALMDEAREVVSLIQERYPQG 260
                L+  D + + +  +  R+P+ 
Sbjct: 656 LLQFNLSQADASLKTLQDLVNRFPKS 681


>gi|171911019|ref|ZP_02926489.1| TPR repeat [Verrucomicrobium spinosum DSM 4136]
          Length = 844

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 34/96 (35%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           +D         ++Y+ A L   +Q++  A + +      +P      ++        Y  
Sbjct: 67  VDPGRVPGPDEDLYDYATLTYNQQDYKLAIKPYTDYVTTYPLGRHGAEAWFRLGECYYKT 126

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
            +   A     E +T++P + +     Y +GM    
Sbjct: 127 KQNDDAKRCYNEVLTRFPRTDSAGLAAYRMGMFSYN 162



 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 54/155 (34%), Gaps = 22/155 (14%)

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
            F +  AGKY  A +    +I ++P+  N+       G++  + I             L 
Sbjct: 458 GFAEAEAGKYTDAVNTLTMFIQEFPKDANLPVALAQRGIA-FKGIPSFD-------KALA 509

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
             + I++ +   P ++ A +     +++L      I  +              + ++  +
Sbjct: 510 DFTVIIKDFRGHPALEMAYYQSGDIKSRLRDLPGMIADF--------------ETLVKTF 555

Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
                A E   R+   Y  L   +   + +  +++
Sbjct: 556 PATPAAAECWYRIGRGYFDLKTREGYGKALEPLRK 590



 Score = 39.7 bits (92), Expect = 0.43,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 60/198 (30%), Gaps = 36/198 (18%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ-- 104
            +  V +      +Y+K     +   ++ A        ++FP     + + L  A  Q  
Sbjct: 441 DVSKVPNKVRATVIYKKGFAEAEAGKYTDAVNTLTMFIQEFP-----KDANLPVALAQRG 495

Query: 105 --YSA-GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
             +     + +A +     I  +     ++  YY  G      I+    D       +  
Sbjct: 496 IAFKGIPSFDKALADFTVIIKDFRGHPALEMAYYQSG-----DIKSRLRDLPGM---IAD 547

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK---RGEYVAAIPRFQLVLA 218
              +V+ +  +P      +               IGR Y     R  Y  A+   +  + 
Sbjct: 548 FETLVKTFPATPAAAECWYR--------------IGRGYFDLKTREGYGKALEPLRKAIE 593

Query: 219 NYSDAEHAEEAMARLVEA 236
                ++ +EA   L+  
Sbjct: 594 LDPK-KYLDEASQLLISC 610



 Score = 38.9 bits (90), Expect = 0.81,   Method: Composition-based stats.
 Identities = 11/78 (14%), Positives = 31/78 (39%), Gaps = 8/78 (10%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y+   Y+ A     +Y+T YP  ++    ++ +G  Y +  ++            +  + 
Sbjct: 87  YNQQDYKLAIKPYTDYVTTYPLGRHGAEAWFRLGECYYKTKQNDD--------AKRCYNE 138

Query: 165 IVERYTNSPYVKGARFYV 182
           ++ R+  +     A + +
Sbjct: 139 VLTRFPRTDSAGLAAYRM 156



 Score = 35.9 bits (82), Expect = 6.1,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 65/200 (32%), Gaps = 16/200 (8%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEEYI 121
              + K  NF  A +Y        P      + ++       +   G Y  +    + Y+
Sbjct: 645 GERYFKRDNFKAAAKYL--VKATTPDNPSGTQGIVWNYLGMAELENGNYDASIRALDFYL 702

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
            Q PE  +        G     ++     D+      ++ +  + E          A+  
Sbjct: 703 AQTPEGASRAKALLTKG---HALLGKKSLDEADA-CAIEGLQIMKEG------RLHAQLQ 752

Query: 182 VTVGRNQLAAKEVEI--GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +  G   +A  EV    G     +  +  A   + +V   + D E   EA  +  +A   
Sbjct: 753 LLQGDVFMARGEVAAPTGDLDGAKAAWQKAAGNYVVVSQVFVDPEITPEAAHKAADALDK 812

Query: 240 LALMDEAREVVSLIQERYPQ 259
           L   D+A  +   I+ +YP 
Sbjct: 813 LGQKDKANSLREQIKTKYPN 832



 Score = 35.9 bits (82), Expect = 6.7,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 25/61 (40%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
             + +Y  AI  +   +  Y    H  EA  RL E Y      D+A+   + +  R+P+ 
Sbjct: 87  YNQQDYKLAIKPYTDYVTTYPLGRHGAEAWFRLGECYYKTKQNDDAKRCYNEVLTRFPRT 146

Query: 261 Y 261
            
Sbjct: 147 D 147


>gi|24954813|gb|AAN64317.1| type 5 serine/threonine phosphatase 55 kDa isoform [Solanum
           lycopersicum]
 gi|28141084|gb|AAO26214.1| type 5 protein serine/threonine phosphatase 55 kDa isoform [Solanum
           lycopersicum]
          Length = 485

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 40/137 (29%), Gaps = 23/137 (16%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
           ++     E+ + A    K   +S+A + +      +   A          AF      +Y
Sbjct: 9   SNASRAEELKQLANEAFKGHKYSQAIDLYTQAIELNGENAVY----YANRAFAHTKLEEY 64

Query: 111 QQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
             A   G   I   P      Y   YY  G +Y  M           K  L+   ++ + 
Sbjct: 65  GSAIQDGTRAIEIDPR-----YSKGYYRRGAAYLAM--------GKFKDALKDFQQVKKL 111

Query: 169 YTNSPYVKGARFYVTVG 185
             N P    A   +   
Sbjct: 112 CPNDP---DATKKLKEC 125


>gi|322705751|gb|EFY97335.1| serine/threonine-protein phosphatase 5 [Metarhizium anisopliae
           ARSEF 23]
          Length = 475

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/130 (12%), Positives = 38/130 (29%), Gaps = 23/130 (17%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
            K        ++  A +++++    +   P      ++             Y  A +   
Sbjct: 10  NKGNKSFASGDYPAAVDFYSKAIGLNDKEP-TFFTNRAQ-----AYIKTEAYGYAIADAG 63

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           + +   P  K +   YY  G++   ++R         K  +      V    N+     A
Sbjct: 64  KALELNP--KLIK-AYYRRGLARTAILR--------PKEAIDDFKECVRLDPNNK---DA 109

Query: 179 RFYVTVGRNQ 188
           R  +   +  
Sbjct: 110 RLKLEECKKI 119


>gi|167623624|ref|YP_001673918.1| Tol-Pal system YbgF [Shewanella halifaxensis HAW-EB4]
 gi|167353646|gb|ABZ76259.1| Tol-Pal system YbgF [Shewanella halifaxensis HAW-EB4]
          Length = 241

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 43/127 (33%), Gaps = 14/127 (11%)

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           +  +   ++    +  +  +   ++ +E Y NS Y   A +++                 
Sbjct: 122 ASYEQAVNLVLKDKKYEAAIPAFAQFIESYPNSSYAPNANYWLGQLL------------- 168

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
              + E+V A   F  V+  Y D+    E++ +L           +A+     + + Y  
Sbjct: 169 -YNKSEFVGASKAFTTVVEKYKDSGKRGESLVKLGMIAEKTGDKAKAKAYYLKVTQEYAN 227

Query: 260 GYWARYV 266
              AR  
Sbjct: 228 SAAARIA 234



 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 42/128 (32%), Gaps = 22/128 (17%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
              KY+ A     ++I  YP S       Y +G         V           +  + +
Sbjct: 133 KDKKYEAAIPAFAQFIESYPNSSYAPNANYWLGQLLYNKSEFVG--------ASKAFTTV 184

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           VE+Y +S     +   + +   +   K      YYLK             V   Y+++  
Sbjct: 185 VEKYKDSGKRGESLVKLGMIAEKTGDKAKAKA-YYLK-------------VTQEYANSAA 230

Query: 226 AEEAMARL 233
           A  A+ +L
Sbjct: 231 ARIALQQL 238


>gi|262066201|ref|ZP_06025813.1| tetratricopeptide repeat family protein [Fusobacterium
           periodonticum ATCC 33693]
 gi|291380108|gb|EFE87626.1| tetratricopeptide repeat family protein [Fusobacterium
           periodonticum ATCC 33693]
          Length = 936

 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 71/186 (38%), Gaps = 16/186 (8%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           +  YQR ++     FL + N   A + +     + +      +++++    V Y+  +Y 
Sbjct: 123 EKTYQRTLFAVGQDFLSKDNNEAARDIYKEIIDKKY---ENDKEAMMGLGIVNYNLKEYD 179

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           +A     E+    P+ +N D V YL   +  +           T+  +     +      
Sbjct: 180 KAIYWFSEFQRTKPK-ENKDMVSYLKASALYRK--------GNTEQAIVDFESLANTNPA 230

Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN-YSDAEHAEEAM 230
           + Y K A  Y+    +    K+ +   +YL++ +          ++ + Y   E+ ++A+
Sbjct: 231 NDYSKKAVLYLIEIYSN--KKDEQKVNFYLEKIKGTKEYNTAMTMIGDLYVTKENYDKAL 288

Query: 231 ARLVEA 236
               ++
Sbjct: 289 EYYNQS 294



 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 73/212 (34%), Gaps = 29/212 (13%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y K +  +  + + +A  +F     +   + ++ K  L      + A KY +A   GE+Y
Sbjct: 508 YLKGIAAMGLKKYDEAETHFQNVLSNGDQS-LSTKVYLNRVRNFFLAEKYNEAIQAGEQY 566

Query: 121 I-TQYPESKNVDYVYYL--VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           +    P+ +   Y   L  +G+SY ++ +   YDQ                   S Y K 
Sbjct: 567 LSKINPDKEKAIYSEMLDKIGLSYFRVGK---YDQAR-----------------SYYSKI 606

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           A         +      +I   Y     Y  A  +++ +  NY +  + E+A  + +   
Sbjct: 607 ASMKGYEVYGK-----FQIADSYYNEKNYATAGEQYKSIYQNYGETFYGEQAYYKYITTL 661

Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETL 269
             L   +      +     YP       +  L
Sbjct: 662 SLLGNTEAFEREKNNFLSVYPNSNLRTTLSNL 693


>gi|225677215|ref|ZP_03788208.1| TPR domain protein [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
 gi|225590739|gb|EEH11973.1| TPR domain protein [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
          Length = 291

 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 30/69 (43%), Gaps = 3/69 (4%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           +KA    +  +   A    NQ    FP+    + +L+    + Y+  +Y++A  +    +
Sbjct: 99  KKAKDSFESGDNEAAISLLNQIIAKFPYH---KNALIGLGNIYYANKEYKKAVEIYTRLL 155

Query: 122 TQYPESKNV 130
            ++P +  +
Sbjct: 156 KEHPSNPYI 164


>gi|148262449|ref|YP_001229155.1| chromosome segregation ATPase-like protein [Geobacter
           uraniireducens Rf4]
 gi|146395949|gb|ABQ24582.1| Chromosome segregation ATPase-like protein [Geobacter
           uraniireducens Rf4]
          Length = 1030

 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 40/102 (39%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
           FF  AVC  +         +   +        +++       ++++F  A +  +   + 
Sbjct: 6   FFRAAVCKTLLGILIILSLLPNPAFCLDSEDSQIFIAGFNSYQKRDFQTAVDKMSALLKK 65

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           +P   +   ++   A   Y AG  Q+AA    ++  +YP+S 
Sbjct: 66  YPDTPLRDMAIFWLARANYKAGHRQEAARYMAQFFKEYPDSP 107



 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 3/70 (4%)

Query: 194 VEIGRY--YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
           + I  +  Y KR  +  A+ +   +L  Y D    + A+  L  A        EA   ++
Sbjct: 39  IFIAGFNSYQKRD-FQTAVDKMSALLKKYPDTPLRDMAIFWLARANYKAGHRQEAARYMA 97

Query: 252 LIQERYPQGY 261
              + YP   
Sbjct: 98  QFFKEYPDSP 107



 Score = 37.0 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 35/102 (34%), Gaps = 9/102 (8%)

Query: 93  ARKSLLMSA-FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
           +  S +  A F  Y    +Q A       + +YP++   D   + +  +  +        
Sbjct: 34  SEDSQIFIAGFNSYQKRDFQTAVDKMSALLKKYPDTPLRDMAIFWLARANYKA------- 86

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
               +   +YM++  + Y +SP        +     + A  E
Sbjct: 87  -GHRQEAARYMAQFFKEYPDSPLKATVEDELVTLAAKYAKGE 127


>gi|242087211|ref|XP_002439438.1| hypothetical protein SORBIDRAFT_09g006380 [Sorghum bicolor]
 gi|241944723|gb|EES17868.1| hypothetical protein SORBIDRAFT_09g006380 [Sorghum bicolor]
          Length = 482

 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 43/141 (30%), Gaps = 29/141 (20%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCS---RDFPFAGVARKSLLMSAFVQYS 106
            TD++   E   KA    K   FS+A E +         +  +   A ++     F    
Sbjct: 5   ATDLQRAEEFKLKANDAFKANKFSQAIELYSQAIELNSSNAVY--WANRA-----FAHTK 57

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
             +Y  A     + I   P      Y   YY  G +Y  M           K  L+   +
Sbjct: 58  LEEYGSAVQDATKAIEIDPR-----YSKGYYRRGAAYLAM--------GKFKEALKDFQQ 104

Query: 165 IVERYTNSPYVKGARFYVTVG 185
           + +   N P    A   +   
Sbjct: 105 VKKICPNDP---DATRKLKEC 122


>gi|224372862|ref|YP_002607234.1| putative lipoprotein [Nautilia profundicola AmH]
 gi|223589910|gb|ACM93646.1| putative lipoprotein [Nautilia profundicola AmH]
          Length = 208

 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 58/161 (36%), Gaps = 12/161 (7%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
           F +G   + +   + +++T + +  ++Y+     ++  N  +A E F     + P +   
Sbjct: 13  FFIGCSSK-NEVTHSENLTALSWHYKIYKD----IQNTNLDQADEDFISLEAEHPASIYI 67

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
           +  LL          +Y  A     EY  +Y   + + ++ Y           +   +Q+
Sbjct: 68  KTDLLNLFLAHQQLKEYDLALFYLNEYEKRYASVQEIPWIEYQKIKMNYLKYSNPYTNQQ 127

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
               ++      +++Y NS +              LA  E+
Sbjct: 128 MLLNLITMCDNYLKKYPNSNFSPEVST-------ILAKAEL 161


>gi|88604026|ref|YP_504204.1| TPR repeat-containing protein [Methanospirillum hungatei JF-1]
 gi|88189488|gb|ABD42485.1| TPR repeat [Methanospirillum hungatei JF-1]
          Length = 243

 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 54/152 (35%), Gaps = 31/152 (20%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           Y F   +  ++ +        +++               E+  K +    + ++ +A + 
Sbjct: 14  YSFLFLVVLTVTLGGTSLCVAETT--------------AELTTKGIALYDDGHYDEALDL 59

Query: 80  FNQC---SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
           F Q      DF +A              Y   +Y++A    ++ +   PE    DY +Y 
Sbjct: 60  FEQVLETESDFAYAWY------NKGNALYHLKEYKEAIEAYKKALEIDPEYSYADYAWYN 113

Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +G SY ++        + T+  ++   + ++ 
Sbjct: 114 IGNSYLEL--------KETEKAIEAYEKAIDY 137



 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 40/130 (30%), Gaps = 19/130 (14%)

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y  G Y +A  L E+ +       +  Y +Y  G +   +        +  K  ++  
Sbjct: 46  ALYDDGHYDEALDLFEQVLE---TESDFAYAWYNKGNALYHL--------KEYKEAIEAY 94

Query: 163 SRIVERYTNSPYVKGA-------RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
            + +E      Y   A          +      + A E  I  Y     E++ AI     
Sbjct: 95  KKALEIDPEYSYADYAWYNIGNSYLELKETEKAIEAYEKAI-DYLYSTEEWIKAIEIADK 153

Query: 216 VLANYSDAEH 225
           V+      E+
Sbjct: 154 VIEFAPTKEY 163


>gi|31789446|gb|AAP58560.1| hypothetical protein [uncultured Acidobacteria bacterium]
          Length = 157

 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 42/106 (39%), Gaps = 21/106 (19%)

Query: 184 VGRNQLAA----KEVEIGRYYLK-RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
           + R+ L        + + R+Y K +  YVAAI R + + A        +E +    E+ +
Sbjct: 36  LVRDALLEEDSLHNLTVARHYFKLKKAYVAAIKRCEEIDAGNPTFSKMDEVLFIAGESSL 95

Query: 239 ALA----------------LMDEAREVVSLIQERYPQGYWARYVET 268
            LA                L+ +AR  ++ +   YP   + +  +T
Sbjct: 96  RLAENKGKQKAPKDKTPEQLLQDARVYLTRLVNGYPNSSFFKQAQT 141



 Score = 35.5 bits (81), Expect = 7.5,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 37/97 (38%), Gaps = 9/97 (9%)

Query: 98  LMSAFVQYSAGK-YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI-----RDVPYD 151
           L  A   +   K Y  A    EE     P    +D V ++ G S  ++      +  P D
Sbjct: 50  LTVARHYFKLKKAYVAAIKRCEEIDAGNPTFSKMDEVLFIAGESSLRLAENKGKQKAPKD 109

Query: 152 QRA---TKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           +      +    Y++R+V  Y NS + K A+  +   
Sbjct: 110 KTPEQLLQDARVYLTRLVNGYPNSSFFKQAQTDLAAL 146


>gi|37521471|ref|NP_924848.1| hypothetical protein glr1902 [Gloeobacter violaceus PCC 7421]
 gi|35212468|dbj|BAC89843.1| glr1902 [Gloeobacter violaceus PCC 7421]
          Length = 326

 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 76/219 (34%), Gaps = 32/219 (14%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
            +    + +     ++LK + F +A + F +  R  P +    ++ L           Y+
Sbjct: 45  EEPSSLQALMLTGSVYLKTKRFDEALDAFQKALRVDPLSP---QACLGIGMAHLRKKDYK 101

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           QA    E  +   P+S      Y  +GMS           Q    L +QY ++ +     
Sbjct: 102 QATVAFESALKLDPKSAK---AYITLGMS--------ALGQEHYDLAIQYFNKALRFDPQ 150

Query: 172 SPYVKG----ARFYVTVGRNQLAAKE-------------VEIGRYYLKRGEYVAAIPRFQ 214
           +   +     A   +    + ++  E             + +  +YL+  +Y +A    Q
Sbjct: 151 AEMARILISRAYKKLGKPGDAVSTLETAVKLNPKSGMANMSLASFYLQNKDYTSAEAALQ 210

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            VL    D       M  L + YV     +EA +++  +
Sbjct: 211 RVLEARGDKPA-PTIMLSLADLYVQTDRTEEAGDILRAL 248



 Score = 45.5 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 67/197 (34%), Gaps = 34/197 (17%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A    +E+ + +A E       + P +    ++L+++  V     ++ +A    ++ +  
Sbjct: 23  AGTLFREKRYDEALEEATAILEEEPSS---LQALMLTGSVYLKTKRFDEALDAFQKALRV 79

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
            P S         +GM++ +         +  K         ++    S     A+ Y+T
Sbjct: 80  DPLSPQ---ACLGIGMAHLRK--------KDYKQATVAFESALKLDPKS-----AKAYIT 123

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
           +G + L  +  ++   Y  +        RF            AE A   +  AY  L   
Sbjct: 124 LGMSALGQEHYDLAIQYFNK------ALRFD---------PQAEMARILISRAYKKLGKP 168

Query: 244 DEAREVVSLIQERYPQG 260
            +A   +    +  P+ 
Sbjct: 169 GDAVSTLETAVKLNPKS 185



 Score = 39.3 bits (91), Expect = 0.53,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 47/138 (34%), Gaps = 22/138 (15%)

Query: 32  VCFLVGWERQSSRDVYLDSVT-------DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            C  +G      +D    +V        D +  +      +  L ++++  A +YFN+  
Sbjct: 86  ACLGIGMAHLRKKDYKQATVAFESALKLDPKSAKAYITLGMSALGQEHYDLAIQYFNKAL 145

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
           R   F   A  + ++ +      GK   A S  E  +   P+S          GM+   +
Sbjct: 146 R---FDPQAEMARILISRAYKKLGKPGDAVSTLETAVKLNPKS----------GMANMSL 192

Query: 145 IRDV--PYDQRATKLMLQ 160
                   D  + +  LQ
Sbjct: 193 ASFYLQNKDYTSAEAALQ 210


>gi|193659732|ref|XP_001943461.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog
           [Acyrthosiphon pisum]
          Length = 1185

 Score = 49.3 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 44/276 (15%), Positives = 103/276 (37%), Gaps = 37/276 (13%)

Query: 1   MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
           +   L  +  + EA        A+T  +++A  F    + Q +  +Y D + +     + 
Sbjct: 473 LEESLSLSKKMVEADPQHYNSIAVTTTYNLARIFEAQCQFQKAETLYKDILKEHPNYIDC 532

Query: 61  YEK-AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           Y +   +        +A ++F +      + P    +    L  A +++  G+       
Sbjct: 533 YLRLGCMARDRNQIYEASDWFKEALRIDNEHP-DAWSLLGNLHLAKMEWGPGQ------- 584

Query: 117 GEEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPY--DQ--RATKLMLQYMSRIVERYT 170
            +++      P + N  Y    +G  + Q +       DQ  R   L LQ+ +++++   
Sbjct: 585 -KKFERVLKNPSTLNDSYSLIALGNVWLQTLHQPTRNKDQEKRHQDLALQFFTKVLKNDP 643

Query: 171 NSPYVKG------ARFY-VTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRF 213
            + +         A  + +   R+  A  +E         + I   Y+++ +Y++AI  +
Sbjct: 644 RNIWAANGIGCVMAHKHCINEARDIFAQVREATADFCDVWLNIAHIYIEQKQYISAIQMY 703

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           +  +  +   +   E +  L  AY     + EA+ V
Sbjct: 704 ENCMKKFFKHDSV-EVLQYLGRAYFRAGKLKEAKTV 738


>gi|126661330|ref|ZP_01732397.1| TPR repeat [Cyanothece sp. CCY0110]
 gi|126617383|gb|EAZ88185.1| TPR repeat [Cyanothece sp. CCY0110]
          Length = 306

 Score = 49.3 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 48/272 (17%), Positives = 83/272 (30%), Gaps = 70/272 (25%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +  F       +AV F +G+   +S +  +            + + V +L +QN+ +A  
Sbjct: 5   VKNFFNFFVLIVAVLFCLGFSSPNSENESISPN---------FSQGVYYLTQQNYQEAIL 55

Query: 79  YFNQCSRDFPF---AGVA-------------------RKSL----------LMSAFVQYS 106
            F Q   +      +  +                    ++L          L      Y 
Sbjct: 56  KFTQVINNKNQKIASAYSNRCLAYLQINNNQAAKRDCEQALEMNSNNIEAYLNKGLADYQ 115

Query: 107 AGKYQQAASLGEEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
              Y Q+ +  +E I      KN DY  YY  G+ Y ++           +  L+   + 
Sbjct: 116 LENYTQSLAAYQEVIK---RHKN-DYRAYYNQGLVYFKL--------ENYQQALENYQQA 163

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           +E   +                 LA         YLK   +  AI  F  VL    +   
Sbjct: 164 LETNQDHSLKDKT---FIYYDRALA---------YLKLENFTQAIANFTHVLILNPN--- 208

Query: 226 AEEAMARLVEAYVALALMDEA-REVVSLIQER 256
            E+A  R   AY  L     A ++   +I   
Sbjct: 209 NEQAYYRRGYAYQKLGNYQAAFKDFTEVIALN 240



 Score = 44.0 bits (103), Expect = 0.022,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 65/207 (31%), Gaps = 47/207 (22%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            K +   + +N++++   + +  +         ++      V +    YQQA    ++ +
Sbjct: 108 NKGLADYQLENYTQSLAAYQEVIKRHK-NDY--RAYYNQGLVYFKLENYQQALENYQQAL 164

Query: 122 TQYPESKNVD--YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
               +    D  ++YY   ++Y ++              +   + ++    N+     A 
Sbjct: 165 ETNQDHSLKDKTFIYYDRALAYLKL--------ENFTQAIANFTHVLILNPNNE---QAY 213

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +                   Y K G Y AA   F  V+A              L  AY+ 
Sbjct: 214 YRRGYA--------------YQKLGNYQAAFKDFTEVIALNPQ----------LTGAYIN 249

Query: 240 -------LALMDEAREVVSLIQERYPQ 259
                  L L D A +   +   ++ Q
Sbjct: 250 RGIVAGILGLQDIAWQNFKIALHQFQQ 276



 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 3/67 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            Y++A+ +LK +NF++A   F       P      ++     +     G YQ A     E
Sbjct: 179 YYDRALAYLKLENFTQAIANFTHVLILNPNN---EQAYYRRGYAYQKLGNYQAAFKDFTE 235

Query: 120 YITQYPE 126
            I   P+
Sbjct: 236 VIALNPQ 242


>gi|326433157|gb|EGD78727.1| serine/threonine-protein phosphatase 5 [Salpingoeca sp. ATCC 50818]
          Length = 478

 Score = 49.3 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/147 (12%), Positives = 41/147 (27%), Gaps = 19/147 (12%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQ 112
               E   K     K++ F +A E++       P        ++     F       +  
Sbjct: 3   TPAEEAKAKGNECFKKKQFHEAIEHYTAAIELDPSVPAYYTNRA-----FAYIKTEGFGA 57

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A    +  + + P+       YY    +   +           K   +    +++   N 
Sbjct: 58  ALEDADSALRRNPKFVK---AYYRRATANMGL--------GKWKASKRDFEAVLKVRPND 106

Query: 173 PYVKGARFYVTVGRNQLA-AKEVEIGR 198
              +     V     +LA  K + +G 
Sbjct: 107 KDAQKKFKEVDKIVRRLAFEKAITVGE 133


>gi|291277600|ref|YP_003517372.1| putative paralysed flagellum protein PflA [Helicobacter mustelae
           12198]
 gi|290964794|emb|CBG40650.1| putative paralysed flagellum protein, PflA [Helicobacter mustelae
           12198]
          Length = 774

 Score = 49.3 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 49/151 (32%), Gaps = 11/151 (7%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y K    +  Q++  A        + +P    A+  L       Y   +Y  A      +
Sbjct: 179 YLKVKDLVDSQSYRAALNNIANAFKKYPKTLFAKDFLFFQIKALYHLKRYDSAIDYANAW 238

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +  Y    +V  + YLV  SYA++        R       Y  RI++ Y  + +   A  
Sbjct: 239 LKNYSSDTSVPEMLYLVANSYARL--------RFPSESNYYYRRIIDEYPGNRFA--ALS 288

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
            + +         V + R Y     Y  A  
Sbjct: 289 KIKIANMFAGGSNVGLARLYYS-QAYQEAKN 318



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 53/142 (37%), Gaps = 24/142 (16%)

Query: 124 YPESKN--VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
            P + N   DY  YL        ++D+  D ++ +  L  ++   ++Y  + + K   F 
Sbjct: 166 NPMNTNLGADYAEYLK-------VKDLV-DSQSYRAALNNIANAFKKYPKTLFAKD--FL 215

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
               +            Y+LKR  Y +AI      L NYS      E +  +  +Y  L 
Sbjct: 216 FFQIK----------ALYHLKR--YDSAIDYANAWLKNYSSDTSVPEMLYLVANSYARLR 263

Query: 242 LMDEAREVVSLIQERYPQGYWA 263
              E+      I + YP   +A
Sbjct: 264 FPSESNYYYRRIIDEYPGNRFA 285


>gi|254495292|ref|ZP_05108216.1| conserved hypothetical protein [Polaribacter sp. MED152]
 gi|85819646|gb|EAQ40803.1| conserved hypothetical protein [Polaribacter sp. MED152]
          Length = 1011

 Score = 49.3 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 68/209 (32%), Gaps = 39/209 (18%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCS--------RDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           Y +A    + +N+ +A   F   +        +DFP            A+  +    Y++
Sbjct: 469 YWEAETLYRLENYEEALSKFIALNNSLRSANNKDFPLLEY------NIAYCHFKLKDYEK 522

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           AA    ++                   S    I     D    +L   Y +  +  Y   
Sbjct: 523 AALTFNQF-------------------SGKGNIDQNIKDDSFLRLGDSYFA--IRNY--- 558

Query: 173 PYVKGARFYVTVGRNQLAAKEVE-IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
                A   +       A   +   G  Y  + +  A +     V+ NY  +   ++A+ 
Sbjct: 559 EKAIRAYKVIVDNSGLDADYAMYQTGMSYGFQNKNEAKVNALTKVINNYQISSLKDDALF 618

Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQG 260
           +L   Y  L   ++A +  + +QE++ + 
Sbjct: 619 QLAATYTKLKDFEKAHQAYTRLQEKHVKS 647



 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 15/122 (12%), Positives = 41/122 (33%), Gaps = 10/122 (8%)

Query: 60  VYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           +Y+  + +  + +N +K      +   ++  + +   +L   A        +++A     
Sbjct: 580 MYQTGMSYGFQNKNEAK-VNALTKVINNYQISSLKDDALFQLAATYTKLKDFEKAHQAYT 638

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
               ++ +S  +       G+ Y    ++         L L    ++ + Y NS     A
Sbjct: 639 RLQEKHVKSVFIPTALVREGLLYYNQNKNS--------LALNNFKKVAQTYPNSSEALEA 690

Query: 179 RF 180
             
Sbjct: 691 VK 692



 Score = 39.7 bits (92), Expect = 0.38,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 63/169 (37%), Gaps = 27/169 (15%)

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             ++  KY++A    + Y  +  +  N DY  Y +G +Y +        Q   +  + Y 
Sbjct: 257 SYFNLNKYEEAIPYLKGYKGKNGKWNNTDY--YQLGYAYFK--------QNDFENAISYF 306

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA-NYS 221
           ++I+++   +   + A +++                 YL   +   A+  F+     +Y+
Sbjct: 307 NKIIDQ--ENAVAQNAYYHLAEC--------------YLNIDKKNEALNAFKTASEMSYN 350

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
            +   + A+     +Y      +   +V+    + YP     + +  L+
Sbjct: 351 SSIKEDAALNYAKLSYEEGNPFENVSDVLQNYLKTYPNSTSYKEINELI 399



 Score = 39.7 bits (92), Expect = 0.44,   Method: Composition-based stats.
 Identities = 23/188 (12%), Positives = 46/188 (24%), Gaps = 25/188 (13%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              +     + +A  Y                      +  +    ++ A S   + I Q
Sbjct: 255 GESYFNLNKYEEAIPYLKGYKGKN--GKWNNTDYYQLGYAYFKQNDFENAISYFNKIIDQ 312

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
             E+      YY +   Y  + +            L       E   NS   + A     
Sbjct: 313 --ENAVAQNAYYHLAECYLNIDKK--------NEALNAFKTASEMSYNSSIKEDAALNYA 362

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
                           Y +   +       Q  L  Y ++   +E    +V +++     
Sbjct: 363 KLS-------------YEEGNPFENVSDVLQNYLKTYPNSTSYKEINELIVSSFIHENDY 409

Query: 244 DEAREVVS 251
             A E + 
Sbjct: 410 QGALEYLK 417


>gi|90022172|ref|YP_527999.1| hypothetical protein Sde_2527 [Saccharophagus degradans 2-40]
 gi|89951772|gb|ABD81787.1| Tetratricopeptide TPR_2 [Saccharophagus degradans 2-40]
          Length = 255

 Score = 49.3 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 43/109 (39%), Gaps = 8/109 (7%)

Query: 56  YQREV--YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
            ++E+  Y+ A+   L++Q++  A     Q   ++P    A  +      +     + +Q
Sbjct: 130 PEQELQEYKDAIDLVLRKQDYKNAVIALKQHLDNYPKGRYAANAQYWLGELYLKDNELEQ 189

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           +       + ++P    V    Y +G  Y     D+  D+   K MLQ 
Sbjct: 190 SRQWFSRLLGEFPNHTKVPDAKYKLGRVY-----DMMGDKATAKKMLQE 233



 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 39/111 (35%), Gaps = 15/111 (13%)

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
           Y   I  V   Q   K  +  + + ++ Y    Y   A++++      L   E+E  R +
Sbjct: 137 YKDAIDLVLRKQ-DYKNAVIALKQHLDNYPKGRYAANAQYWLGELY--LKDNELEQSRQW 193

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
             R            +L  + +     +A  +L   Y  +     A++++ 
Sbjct: 194 FSR------------LLGEFPNHTKVPDAKYKLGRVYDMMGDKATAKKMLQ 232


>gi|297537632|ref|YP_003673401.1| hypothetical protein M301_0440 [Methylotenera sp. 301]
 gi|297256979|gb|ADI28824.1| hypothetical protein M301_0440 [Methylotenera sp. 301]
          Length = 755

 Score = 49.3 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 34/86 (39%), Gaps = 1/86 (1%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
                ++D  Y  ++  +A +     ++ KA +  N      P    ++ +  + A  + 
Sbjct: 165 AKPADMSDNDYAAKLMAEARVARGFGDYPKAVQLLNAVLAL-PSNTHSQDAQELIANSRE 223

Query: 106 SAGKYQQAASLGEEYITQYPESKNVD 131
             G+  +A +  E Y+  YP+ +   
Sbjct: 224 KMGEMTKAKAEYETYLKLYPQGEGAA 249


>gi|15966490|ref|NP_386843.1| hypothetical protein SMc02941 [Sinorhizobium meliloti 1021]
 gi|15075761|emb|CAC47316.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
          Length = 345

 Score = 49.3 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 46/155 (29%), Gaps = 17/155 (10%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRY---QREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
                 G     +     DS           ++Y+     +   ++S A + F      F
Sbjct: 192 TGLATQGGGLNDNPGSVPDSGQATASLSDPGDLYQAGYSHVLSGDYSIAEQEFRDYLDAF 251

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES---KNVDYVYYLVGMSYAQM 144
           P    A  +       QYS GKY  A    + ++  +           +   +GMS   +
Sbjct: 252 PSGDKAADASFWMGEAQYSQGKYSDA---AKTFLNAHQSHGKSPKAPEMLLKLGMSLGAL 308

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
                      +     +  + +RY+ +     A+
Sbjct: 309 DNK--------ETACATLREVNKRYSKASPAVKAK 335



 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 34/100 (34%), Gaps = 14/100 (14%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
             Q     ++ + +      A F++   +                +G+Y  A   F    
Sbjct: 240 AEQEFRDYLDAFPSGDKAADASFWMGEAQ--------------YSQGKYSDAAKTFLNAH 285

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
            ++  +  A E + +L  +  AL   + A   +  + +RY
Sbjct: 286 QSHGKSPKAPEMLLKLGMSLGALDNKETACATLREVNKRY 325


>gi|169597993|ref|XP_001792420.1| hypothetical protein SNOG_01794 [Phaeosphaeria nodorum SN15]
 gi|111070323|gb|EAT91443.1| hypothetical protein SNOG_01794 [Phaeosphaeria nodorum SN15]
          Length = 474

 Score = 49.3 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 55/191 (28%), Gaps = 47/191 (24%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
                +  K     K Q++  A +++ +        P +    ++             Y 
Sbjct: 6   EEATALKNKGNDAFKNQDWPAALDFYTKAIELWDKEP-SFYTNRAQ-----ANIKLESYG 59

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            A +  ++ I   P +      YY    +   M++         +  L+    ++++  N
Sbjct: 60  YAVADADKAIELDPNNVK---AYYRRASANTSMLKH--------REALRDWKLVIKKAPN 108

Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
                 A+  +      +            KR  ++ AI      +    DA  A E + 
Sbjct: 109 D---ANAKLRMHECEKII------------KRDAFLKAIE-----VE---DAPSAAEGLD 145

Query: 232 R----LVEAYV 238
                L   Y 
Sbjct: 146 IEHMALERNYD 156


>gi|302608154|emb|CBW44426.1| conserved hypothetical protein, putative exported protein
           [Marinobacter hydrocarbonoclasticus]
          Length = 258

 Score = 49.3 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 44/129 (34%), Gaps = 22/129 (17%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
             Y  A +   E++  YPE       YY +G  Y    +         +   Q  + +  
Sbjct: 150 KDYDTAITRLYEFVDTYPEGDLTVNAYYWLGEVYLAKPQ--------LEQARQAFTIVAT 201

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
           RY++      A + + V  ++L  K+               A  R   V+  Y D+  AE
Sbjct: 202 RYSDHRKAPDAVYKLGVTLDRLGEKD--------------EARRRMTSVVEQYPDSGAAE 247

Query: 228 EAMARLVEA 236
            A   L  A
Sbjct: 248 LAKKYLDSA 256



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/136 (12%), Positives = 51/136 (37%), Gaps = 9/136 (6%)

Query: 52  TDVRYQREVYEKAVLFL-KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
           +    +++ Y   +  +  ++++  A     +    +P   +   +      V  +  + 
Sbjct: 130 SPEPEEQKTYNDIIDLIRNKKDYDTAITRLYEFVDTYPEGDLTVNAYYWLGEVYLAKPQL 189

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           +QA        T+Y + +      Y +G++  ++               + M+ +VE+Y 
Sbjct: 190 EQARQAFTIVATRYSDHRKAPDAVYKLGVTLDRL--------GEKDEARRRMTSVVEQYP 241

Query: 171 NSPYVKGARFYVTVGR 186
           +S   + A+ Y+   +
Sbjct: 242 DSGAAELAKKYLDSAQ 257



 Score = 42.4 bits (99), Expect = 0.060,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 45/119 (37%), Gaps = 14/119 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
              I D+  +++     +  +   V+ Y        A +++              G  YL
Sbjct: 139 YNDIIDLIRNKKDYDTAITRLYEFVDTYPEGDLTVNAYYWL--------------GEVYL 184

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            + +   A   F +V   YSD   A +A+ +L      L   DEAR  ++ + E+YP  
Sbjct: 185 AKPQLEQARQAFTIVATRYSDHRKAPDAVYKLGVTLDRLGEKDEARRRMTSVVEQYPDS 243


>gi|159899595|ref|YP_001545842.1| lytic transglycosylase catalytic [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159892634|gb|ABX05714.1| Lytic transglycosylase catalytic [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 777

 Score = 49.3 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 74/244 (30%), Gaps = 40/244 (16%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
            ++ V  L    R     V   + T +    ++ ++A    +      A   + Q    +
Sbjct: 18  VALIVLLLASCSRDV---VGQPTATPLPSPAQLLQQAEQHQQADQVDLALSDYQQVLLQY 74

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
           P A  AR +    A+  +    +  A S    +I     ++     ++L  +     + +
Sbjct: 75  PDAPEARVAKFGVAYSAFLRQDWAAAWSQLTSFI-----NEQTHDQWHLRALFLLGRVAE 129

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
           +  D        Q    +      S Y    R       NQ    E  I  Y        
Sbjct: 130 IQGDHAIAIEAYQQYEDLKGLL--SGYAAQRRAAQLQATNQ---TEQAIAAY-------- 176

Query: 208 AAIPRF-----------QLVLANYSDAEHAEEAMARLVE--------AYVALALMDEARE 248
           AA  R+              L  Y     AE+A+ +L          ++ +  L+D AR 
Sbjct: 177 AASGRYDMAGPQRVASLNKALEFYDQTGQAEQALTQLEVILSFARTPSFRSTTLLDAARR 236

Query: 249 VVSL 252
              L
Sbjct: 237 AQRL 240



 Score = 38.9 bits (90), Expect = 0.69,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 60/218 (27%), Gaps = 32/218 (14%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           S   + +D +  +     V   A +      +  A   F+Q   +      A +     A
Sbjct: 261 SEAPIAIDELAALGESTPVLAAAGIAYNHGQYLDAISLFDQVLANGLSGEEAAEIERKRA 320

Query: 102 FVQYSAGKYQQAASL----GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
                   Y  A +      E +    P                A   +    D+  ++L
Sbjct: 321 LALRQLDDYAGAQAAFNSIAERFAEL-PIG--------RQARLDAIQTQGQAGDREGSRL 371

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
                +   ERY + P    A   V    +                G+  A     Q++L
Sbjct: 372 AYLDFA---ERYADDPLAPEALRRVVEITSW--------------SGDPAATAN-AQIML 413

Query: 218 -ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
              Y  +   ++A+            +++A  V  L+ 
Sbjct: 414 GQRYPWSHEGQQALHAAGRYAWDTGQVEQAAAVWQLLG 451


>gi|154247010|ref|YP_001417968.1| Tol-Pal system YbgF [Xanthobacter autotrophicus Py2]
 gi|154161095|gb|ABS68311.1| Tol-Pal system YbgF [Xanthobacter autotrophicus Py2]
          Length = 307

 Score = 49.3 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 42/116 (36%), Gaps = 8/116 (6%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           RE+Y+     L+ Q+++ A + F Q  +      +   +  M     +    Y  AA+  
Sbjct: 184 RELYDAGQAQLQRQDYAGAEQTFRQIIQSASGDRIIPDATFMLGESLFLRQNYGDAAASF 243

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
            E  T+YP S         +G S A +           +     +  +  +Y  +P
Sbjct: 244 LEVSTKYPNSTRAPEALLRLGQSLAGL--------GEKETACATLQEVDRKYPRAP 291



 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 24/56 (42%)

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           R  Y  A   F  V   Y ++  A EA+ RL ++   L   + A   +  +  +YP
Sbjct: 233 RQNYGDAAASFLEVSTKYPNSTRAPEALLRLGQSLAGLGEKETACATLQEVDRKYP 288



 Score = 42.8 bits (100), Expect = 0.049,   Method: Composition-based stats.
 Identities = 23/146 (15%), Positives = 39/146 (26%), Gaps = 23/146 (15%)

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
           P +G + + L  +   Q     Y  A     + I      + +    +++G S       
Sbjct: 177 PGSGGSVRELYDAGQAQLQRQDYAGAEQTFRQIIQSASGDRIIPDATFMLGESLFLR--- 233

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
                +           +  +Y NS     A   +      L  KE              
Sbjct: 234 -----QNYGDAAASFLEVSTKYPNSTRAPEALLRLGQSLAGLGEKE-------------- 274

Query: 208 AAIPRFQLVLANYSDAE-HAEEAMAR 232
            A    Q V   Y  A     +A+ R
Sbjct: 275 TACATLQEVDRKYPRAPSSIRQAVER 300


>gi|149375119|ref|ZP_01892891.1| hypothetical protein MDG893_05859 [Marinobacter algicola DG893]
 gi|149360483|gb|EDM48935.1| hypothetical protein MDG893_05859 [Marinobacter algicola DG893]
          Length = 253

 Score = 49.3 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 45/129 (34%), Gaps = 22/129 (17%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           +    Y QA +   ++I +Y E       YY +G  Y          +   +   Q  + 
Sbjct: 142 HQEKNYDQAINGLYDFIDEYEEGDLTVNAYYWLGEVYLV--------EEQLEQARQAFTI 193

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +  RY +      A + + V  ++L  KE               A  R Q V+ +Y +  
Sbjct: 194 VATRYGDHRKAPDAVYKLGVTLDRLGDKE--------------QARGRMQTVVRDYPNTS 239

Query: 225 HAEEAMARL 233
            AE A   L
Sbjct: 240 AAELAQKYL 248



 Score = 38.9 bits (90), Expect = 0.67,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 44/124 (35%), Gaps = 9/124 (7%)

Query: 61  YEKAVLFL-KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y+K    + +E+N+ +A         ++    +   +      V     + +QA      
Sbjct: 134 YQKIQTLIHQEKNYDQAINGLYDFIDEYEEGDLTVNAYYWLGEVYLVEEQLEQARQAFTI 193

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
             T+Y + +      Y +G++  ++           +     M  +V  Y N+   + A+
Sbjct: 194 VATRYGDHRKAPDAVYKLGVTLDRL--------GDKEQARGRMQTVVRDYPNTSAAELAQ 245

Query: 180 FYVT 183
            Y+ 
Sbjct: 246 KYLD 249



 Score = 35.5 bits (81), Expect = 7.6,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 42/122 (34%), Gaps = 14/122 (11%)

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           +  Q I+ + + ++     +  +   ++ Y        A +++              G  
Sbjct: 132 TDYQKIQTLIHQEKNYDQAINGLYDFIDEYEEGDLTVNAYYWL--------------GEV 177

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           YL   +   A   F +V   Y D   A +A+ +L      L   ++AR  +  +   YP 
Sbjct: 178 YLVEEQLEQARQAFTIVATRYGDHRKAPDAVYKLGVTLDRLGDKEQARGRMQTVVRDYPN 237

Query: 260 GY 261
             
Sbjct: 238 TS 239


>gi|149918453|ref|ZP_01906943.1| Lytic transglycosylase [Plesiocystis pacifica SIR-1]
 gi|149820753|gb|EDM80163.1| Lytic transglycosylase [Plesiocystis pacifica SIR-1]
          Length = 796

 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 74/229 (32%), Gaps = 50/229 (21%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKS---------------------------LLMSA 101
           + ++   A E F + S D P +  A ++                            L   
Sbjct: 227 EAEDQRAAAELFERLSVDVPLSSYAEEARSELAKLERTKVVERSKAESKSLDRQRKLAEI 286

Query: 102 FVQYSAGKYQQAASLGEEYITQYPE---SK-NVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
               S   Y +  +  + +I Q      S+ +     Y  G +  +  R  P  Q     
Sbjct: 287 DAHLSKRSYAETITAADRFIKQARGLGASEGDRCRALYAKGSAIFKQ-RKRPAAQPVFDQ 345

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
                         S + K A   V   +++      +  R     G+Y  A  RF+ + 
Sbjct: 346 A-------------SKHCKKAGDEVREVKSR-----YQAARGRYSAGKYSDAGTRFEALA 387

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
            ++ D  +A++A  +  E++ +    +EAR+       ++P G  A   
Sbjct: 388 KDHPDHSYADDAWIKAGESWESAGKAEEARKAYESSLAKHPDGDMADEA 436



 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 33/82 (40%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           +VR  +  Y+ A        +S A   F   ++D P    A  + + +     SAGK ++
Sbjct: 356 EVREVKSRYQAARGRYSAGKYSDAGTRFEALAKDHPDHSYADDAWIKAGESWESAGKAEE 415

Query: 113 AASLGEEYITQYPESKNVDYVY 134
           A    E  + ++P+    D   
Sbjct: 416 ARKAYESSLAKHPDGDMADEAL 437


>gi|171912386|ref|ZP_02927856.1| hypothetical protein VspiD_14440 [Verrucomicrobium spinosum DSM
           4136]
          Length = 329

 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 43/116 (37%), Gaps = 17/116 (14%)

Query: 75  KAYEYFNQ---------CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
           +A E F               +P +  A  +LL+ A + +  GK + +  + +E++  +P
Sbjct: 60  EAAERFTAASTIEDCDVVVAKYPGSAAAGNALLLKADLLWKEGKKESSTEVLKEFLKSHP 119

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
           E     +   L+ +   QM      D        Q    + + Y +S  +  A  Y
Sbjct: 120 EHTL--HATTLLALGSKQMALG-DKD-----GATQSFETLKKSYPDSELLPAADIY 167



 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 33/83 (39%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           ++          +   +       +   +   A + F    + +P + +   + + +A +
Sbjct: 112 KEFLKSHPEHTLHATTLLALGSKQMALGDKDGATQSFETLKKSYPDSELLPAADIYNADI 171

Query: 104 QYSAGKYQQAASLGEEYITQYPE 126
            ++ GK  +A +L E  +++YP 
Sbjct: 172 LWADGKTSEAKALLEGMLSRYPG 194


>gi|158520339|ref|YP_001528209.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
 gi|158509165|gb|ABW66132.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
           Hxd3]
          Length = 401

 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/100 (13%), Positives = 31/100 (31%), Gaps = 12/100 (12%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y K     + +++  A   F       P +    ++  M        G+  ++ +  ++
Sbjct: 23  LYVKGDYKFQTKDYDGAIADFTAYLEQKPDSF---QATYMLGRAYLEKGELDKSVATLKK 79

Query: 120 YITQYPESKN------VDYVY---YLVGMSYAQMIRDVPY 150
            +   P          V YV    Y   ++  +   D   
Sbjct: 80  ALEMNPGDPEAILFLGVAYVAKADYENAIATFESFEDPSR 119


>gi|253699348|ref|YP_003020537.1| hypothetical protein GM21_0705 [Geobacter sp. M21]
 gi|251774198|gb|ACT16779.1| conserved repeat domain protein [Geobacter sp. M21]
          Length = 847

 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 31/80 (38%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
            S        +++       +++ +  A +  +   + +P   +   ++   A   Y AG
Sbjct: 47  PSFALDSEDSQIFISGFNAYQKKEYRTAIDSMSVLLKKYPDTPLKDMAIFWLARAHYKAG 106

Query: 109 KYQQAASLGEEYITQYPESK 128
             Q AA    +++ +YP S 
Sbjct: 107 HQQDAAKYMAQFLREYPGSP 126



 Score = 45.9 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 24/61 (39%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            ++ EY  AI    ++L  Y D    + A+  L  A+       +A + ++     YP  
Sbjct: 66  YQKKEYRTAIDSMSVLLKKYPDTPLKDMAIFWLARAHYKAGHQQDAAKYMAQFLREYPGS 125

Query: 261 Y 261
            
Sbjct: 126 P 126



 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 11/84 (13%), Positives = 30/84 (35%), Gaps = 8/84 (9%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y   +Y+ A       + +YP++   D   + +  ++ +            +   +YM++
Sbjct: 66  YQKKEYRTAIDSMSVLLKKYPDTPLKDMAIFWLARAHYKA--------GHQQDAAKYMAQ 117

Query: 165 IVERYTNSPYVKGARFYVTVGRNQ 188
            +  Y  SP        +    ++
Sbjct: 118 FLREYPGSPLKATVEDGLLALADK 141


>gi|85859401|ref|YP_461603.1| protein ERFK [Syntrophus aciditrophicus SB]
 gi|85722492|gb|ABC77435.1| protein ERFK [Syntrophus aciditrophicus SB]
          Length = 314

 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 37/84 (44%), Gaps = 6/84 (7%)

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
            +S G Y  + S  E+ + +YP     D V + +G+ YA        +Q+  +  L+   
Sbjct: 44  YFSQGNYIASLSKYEQIMKKYPA--AGDRVLFEMGIIYAY----PGNEQKDYQKSLECFQ 97

Query: 164 RIVERYTNSPYVKGARFYVTVGRN 187
           ++++ Y  S Y + +   +    N
Sbjct: 98  KLLKDYPESRYRQDSVEMIAHVDN 121



 Score = 36.2 bits (83), Expect = 5.4,   Method: Composition-based stats.
 Identities = 12/93 (12%), Positives = 36/93 (38%), Gaps = 6/93 (6%)

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL--VEAYVA 239
           +    + +A         Y  +G Y+A++ +++ ++  Y      +  +  +  + AY  
Sbjct: 26  ICACSHYMARPSFGEANEYFSQGNYIASLSKYEQIMKKYP--AAGDRVLFEMGIIYAYPG 83

Query: 240 LALMDEAR--EVVSLIQERYPQGYWARYVETLV 270
               D  +  E    + + YP+  + +    ++
Sbjct: 84  NEQKDYQKSLECFQKLLKDYPESRYRQDSVEMI 116


>gi|148264741|ref|YP_001231447.1| lytic transglycosylase, catalytic [Geobacter uraniireducens Rf4]
 gi|146398241|gb|ABQ26874.1| Lytic transglycosylase, catalytic [Geobacter uraniireducens Rf4]
          Length = 715

 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 50/152 (32%), Gaps = 8/152 (5%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
              +A   L  WE  +           +     +Y +A    K    ++A     +  ++
Sbjct: 63  MIGMAASRLEKWEEAADCLSRATEGFPLLADYALYHQARALNKLGKHAEALVPLRKVLKN 122

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
           +P + + R + L+     Y +G Y+ A S   E+I +YP   +     +   +   Q+  
Sbjct: 123 YPESPLVRGAALLLGNTLYDSGDYKGALSAFGEFIEKYPAGADSLSALHKSALCREQLAD 182

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
                       +  +  I   Y  S     A
Sbjct: 183 MTG--------AVSILRSIALNYPASAVAVKA 206



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 46/127 (36%), Gaps = 10/127 (7%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
            +   + + + +A +  ++ +  FP   +A  +L   A      GK+ +A     + +  
Sbjct: 65  GMAASRLEKWEEAADCLSRATEGFPL--LADYALYHQARALNKLGKHAEALVPLRKVLKN 122

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
           YPES  V     L+G +          D    K  L      +E+Y        A     
Sbjct: 123 YPESPLVRGAALLLGNTLY--------DSGDYKGALSAFGEFIEKYPAGADSLSALHKSA 174

Query: 184 VGRNQLA 190
           + R QLA
Sbjct: 175 LCREQLA 181



 Score = 43.6 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 71/233 (30%), Gaps = 36/233 (15%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQA 113
              E+  +  +      +S+A + FN   R  P        K    +    + +  Y+ A
Sbjct: 224 SPSELLHQGTILFDLGKYSQAVKTFNAARRQSPDLNGDFLTKLQFKTGQALFKSRHYKDA 283

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
                E + +  + +  D V + +  + A++ +D        +       ++ E    S 
Sbjct: 284 ELAFNELLKKNLKKETSDDVRFWLARTNAKIGKD--------EEAFNTYLKLAESSPKST 335

Query: 174 YVKGARFYVTVGRNQ---------LAAKEVE--------------IGRYYLKRGEYVAAI 210
               A     + R           L  K +               I     +  ++  A 
Sbjct: 336 LADDALLEAALIRKSQKKWDATLPLLQKSLHLYPDSNQSKNVIWEIAWGSYQTRDFKTAA 395

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
             F  +    S     E+A+     + +A      A+   S +   YP GY+A
Sbjct: 396 EYFNKLANQEST---REKALYWRGRSLLAAGDPKSAQGCFSDLMSEYPLGYYA 445



 Score = 41.3 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 44/131 (33%), Gaps = 22/131 (16%)

Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
            DY  Y    +  ++ +            L  + ++++ Y  SP V+GA     +  N L
Sbjct: 92  ADYALYHQARALNKLGKHA--------EALVPLRKVLKNYPESPLVRGAAL---LLGNTL 140

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
                         G+Y  A+  F   +  Y     +  A+ +       LA M  A  +
Sbjct: 141 -----------YDSGDYKGALSAFGEFIEKYPAGADSLSALHKSALCREQLADMTGAVSI 189

Query: 250 VSLIQERYPQG 260
           +  I   YP  
Sbjct: 190 LRSIALNYPAS 200


>gi|85077237|ref|XP_955993.1| serine/threonine-protein phosphatase 5 [Neurospora crassa OR74A]
 gi|2290382|gb|AAB65138.1| serine/threonine protein phosphatase PPT1 [Neurospora crassa]
 gi|28917032|gb|EAA26757.1| serine/threonine-protein phosphatase 5 [Neurospora crassa OR74A]
 gi|28950344|emb|CAD70968.1| phosphoprotein phosphatase (ppt-1) [Neurospora crassa]
          Length = 479

 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/135 (13%), Positives = 40/135 (29%), Gaps = 26/135 (19%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
            +        ++ KA E++++    +   P    + ++             Y  A     
Sbjct: 13  NEGNKAFAAHDWPKAIEFYDKAIELNDKEP-TFWSNRAQ-----AHLKTEAYGYAIRDAT 66

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           + I   P        YY    +YA ++          K  ++     V+   ++     A
Sbjct: 67  KAIELNPGFVK---AYYRRATAYAAILN--------PKEAVKDFKTCVKIAPDNK---DA 112

Query: 179 RFYVTVG---RNQLA 190
           +  +        QLA
Sbjct: 113 KLKLVECEKIVRQLA 127


>gi|78485245|ref|YP_391170.1| TPR repeat-containing protein [Thiomicrospira crunogena XCL-2]
 gi|78363531|gb|ABB41496.1| Tol system YbgF protein [Thiomicrospira crunogena XCL-2]
          Length = 269

 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/149 (14%), Positives = 46/149 (30%), Gaps = 24/149 (16%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           SS    + +      ++  YE A   +K+ ++  A + F+     +P + +A  S     
Sbjct: 131 SSAATGVTTHAATAKEKRAYEAAFALMKKSDYQGASKAFSAFKATYPHSDLASNS----- 185

Query: 102 FVQYSAGKYQQAA-----SLGEEYIT---QYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
              +      +A      +  + ++     YP S        L              D  
Sbjct: 186 -AYWEGE--AEAVLGNDKAALKAFVDVYETYPTSLKAPAAM-LRAADMYD-------DLG 234

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYV 182
             K       ++++ Y      + AR  +
Sbjct: 235 DKKKAKTLYEKLIQDYPKKNVAEKARKRL 263



 Score = 39.7 bits (92), Expect = 0.41,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 33/102 (32%), Gaps = 14/102 (13%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
             +  S     Y +S     + ++       L              G   AA+  F  V 
Sbjct: 165 ASKAFSAFKATYPHSDLASNSAYWEGEAEAVL--------------GNDKAALKAFVDVY 210

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
             Y  +  A  AM R  + Y  L    +A+ +   + + YP+
Sbjct: 211 ETYPTSLKAPAAMLRAADMYDDLGDKKKAKTLYEKLIQDYPK 252



 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 41/135 (30%), Gaps = 22/135 (16%)

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
            +AF       YQ A+     +   YP S       Y  G + A +  D        K  
Sbjct: 151 EAAFALMKKSDYQGASKAFSAFKATYPHSDLASNSAYWEGEAEAVLGND--------KAA 202

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
           L+    + E Y  S     A                     Y   G+   A   ++ ++ 
Sbjct: 203 LKAFVDVYETYPTSLKAPAAMLR--------------AADMYDDLGDKKKAKTLYEKLIQ 248

Query: 219 NYSDAEHAEEAMARL 233
           +Y     AE+A  RL
Sbjct: 249 DYPKKNVAEKARKRL 263


>gi|189485310|ref|YP_001956251.1| putative lipoprotein [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|170287269|dbj|BAG13790.1| putative lipoprotein [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 201

 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 46/130 (35%), Gaps = 23/130 (17%)

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           A+  Y   K+  A S  + +  +YP ++ V    + +G  +  M              L+
Sbjct: 81  AYGDYLMAKFDLAYSGFQSFADKYPNAELVPQAQFYMGECFYSM--------SMWDKALE 132

Query: 161 YMSRIVERYTN-SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
              ++ +RY   S  V  AR  + +   +L   E               AI  F  ++ +
Sbjct: 133 EYKKVEQRYKKRSDLVSSARLKIALCCQKLDKNE--------------EAIRMFSSIIKD 178

Query: 220 YSDAEHAEEA 229
           +  +  +  A
Sbjct: 179 FPQSPESLTA 188



 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 47/129 (36%), Gaps = 9/129 (6%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y+ A        F  AY  F   +  +P A +  ++        YS   + +A    ++
Sbjct: 77  IYQNAYGDYLMAKFDLAYSGFQSFADKYPNAELVPQAQFYMGECFYSMSMWDKALEEYKK 136

Query: 120 YITQY-PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
              +Y   S  V      + +   ++ ++        +  ++  S I++ +  SP    A
Sbjct: 137 VEQRYKKRSDLVSSARLKIALCCQKLDKN--------EEAIRMFSSIIKDFPQSPESLTA 188

Query: 179 RFYVTVGRN 187
           +  + +  N
Sbjct: 189 KESIEIYNN 197



 Score = 35.9 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 37/106 (34%), Gaps = 15/106 (14%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
           L         ++Y N+  V  A+FY+                +Y     +  A+  ++ V
Sbjct: 92  LAYSGFQSFADKYPNAELVPQAQFYMGEC-------------FY-SMSMWDKALEEYKKV 137

Query: 217 LANYS-DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
              Y   ++    A  ++      L   +EA  + S I + +PQ  
Sbjct: 138 EQRYKKRSDLVSSARLKIALCCQKLDKNEEAIRMFSSIIKDFPQSP 183


>gi|89898740|ref|YP_515850.1| hypothetical protein CF0933 [Chlamydophila felis Fe/C-56]
 gi|89332112|dbj|BAE81705.1| conserved hypothetical protein [Chlamydophila felis Fe/C-56]
          Length = 318

 Score = 49.0 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 38/260 (14%), Positives = 85/260 (32%), Gaps = 45/260 (17%)

Query: 27  FFSIAVCFLVGWERQS------SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           F  +++    G   +       S  +            E   +   +L++Q + +A   F
Sbjct: 7   FVVLSLLLCSGCYARPVSFEPFSGKLSPQKFVPKYSPEEYLSEGKYYLEQQRYRQALLCF 66

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY------VY 134
              +  FP   +  ++L ++    +   +   A      Y+ +     + DY      + 
Sbjct: 67  GMITHHFPKDPLCTEALYLTGVCYFKNDQPDLAEKAFASYMQR----PDSDYSEELFLMK 122

Query: 135 YLVGMSYAQ-------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           Y +  S+AQ       ++   P    A    L+    I+  + N    K         + 
Sbjct: 123 YSIAQSFAQGKRKRIFLLEGFPKLANADADALRIYDEILTAFPN----KDLGAQALYLKG 178

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD--- 244
            L    + I      + +   AI  F+ +   +     + ++  RL E Y+  A  +   
Sbjct: 179 DL----LII------KKDLPEAIKTFKKLTLQFPSHALSPKSFVRLSEIYLMQAKKEPHN 228

Query: 245 -----EAREVVSLIQERYPQ 259
                 A+     I++++P 
Sbjct: 229 VQYLNLAKINEEAIKKQHPN 248



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 1/67 (1%)

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           G+YYL++  Y  A+  F ++  ++       EA+      Y      D A +  +   +R
Sbjct: 50  GKYYLEQQRYRQALLCFGMITHHFPKDPLCTEALYLTGVCYFKNDQPDLAEKAFASYMQR 109

Query: 257 YPQGYWA 263
            P   ++
Sbjct: 110 -PDSDYS 115


>gi|307718791|ref|YP_003874323.1| hypothetical protein STHERM_c11050 [Spirochaeta thermophila DSM
           6192]
 gi|306532516|gb|ADN02050.1| hypothetical protein STHERM_c11050 [Spirochaeta thermophila DSM
           6192]
          Length = 272

 Score = 49.0 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 48/147 (32%), Gaps = 8/147 (5%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           L S     Y   ++    + L    + +A E             +  ++L     + Y  
Sbjct: 63  LSSADSPVYLEALFWYGKICLTLGEYDEARESLEAFLLRGGSHPLYEEALYQKGRLLYLE 122

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           G YQ   S    ++  YP S+ V    Y    S   +                    IVE
Sbjct: 123 GDYQSCISHFNAFLASYPTSQFVPNALYWSAESLFSL--------GHFTEARPLYEHIVE 174

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEV 194
            Y +SP  + AR+ + +    +  +E+
Sbjct: 175 NYRSSPKAEAARYRMELIEYAMREEEL 201



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 56/155 (36%), Gaps = 19/155 (12%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           Y+  +Y+K  L   E ++     +FN     +P +     +L  SA   +S G + +A  
Sbjct: 108 YEEALYQKGRLLYLEGDYQSCISHFNAFLASYPTSQFVPNALYWSAESLFSLGHFTEARP 167

Query: 116 LGEEYITQYPESKNVDYVYYLVGMS-------------------YAQMIRDVPYDQRATK 156
           L E  +  Y  S   +   Y + +                    Y ++  ++   +R+ K
Sbjct: 168 LYEHIVENYRSSPKAEAARYRMELIEYAMREEELLRLLKWSHEEYLKLAEELNQKERSYK 227

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
             L    + + +  +   V+  +  +     +L+ 
Sbjct: 228 EALSIYQQKLNQVPSLEEVEALKARIKELEAELSR 262



 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 47/139 (33%), Gaps = 24/139 (17%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVG-MSYAQMIRDVPYDQRATKLMLQYMSRIV 166
           G+Y +A    E ++ +       +   Y  G + Y +            +  + + +  +
Sbjct: 86  GEYDEARESLEAFLLRGGSHPLYEEALYQKGRLLYLE---------GDYQSCISHFNAFL 136

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
             Y  S +V  A ++       L              G +  A P ++ ++ NY  +  A
Sbjct: 137 ASYPTSQFVPNALYWSAESLFSL--------------GHFTEARPLYEHIVENYRSSPKA 182

Query: 227 EEAMARLVEAYVALALMDE 245
           E A  R+     A+   + 
Sbjct: 183 EAARYRMELIEYAMREEEL 201



 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 62/179 (34%), Gaps = 26/179 (14%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +LL  AFV   AG+Y QA  +    ++      + D   YL  + +   I     +    
Sbjct: 38  ALLRHAFVLVKAGEYIQAKEVFSRLLS------SADSPVYLEALFWYGKICLTLGEYDEA 91

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           +  L+        +         +  +                     G+Y + I  F  
Sbjct: 92  RESLEAFLLRGGSHPLYEEALYQKGRLLYLE-----------------GDYQSCISHFNA 134

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY---PQGYWARYVETLVK 271
            LA+Y  ++    A+    E+  +L    EAR +   I E Y   P+   ARY   L++
Sbjct: 135 FLASYPTSQFVPNALYWSAESLFSLGHFTEARPLYEHIVENYRSSPKAEAARYRMELIE 193


>gi|115453163|ref|NP_001050182.1| Os03g0367000 [Oryza sativa Japonica Group]
 gi|108708340|gb|ABF96135.1| Peptidylprolyl isomerase PASTICCINO1, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113548653|dbj|BAF12096.1| Os03g0367000 [Oryza sativa Japonica Group]
 gi|215768523|dbj|BAH00752.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218192902|gb|EEC75329.1| hypothetical protein OsI_11710 [Oryza sativa Indica Group]
 gi|222624979|gb|EEE59111.1| hypothetical protein OsJ_10973 [Oryza sativa Japonica Group]
          Length = 632

 Score = 49.0 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 52/165 (31%), Gaps = 26/165 (15%)

Query: 38  WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--------F 89
           W   + +++  D+         ++++    L +  + K    +N      P        F
Sbjct: 393 WTGFTFQEIMDDAEKIKTTGNRLFKEGKFELAKAKYEKVLREYNHV---HPQDDDEGKIF 449

Query: 90  AGVARKSL-LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
           A  +R SL L  A      G+Y+++     + +   P         Y  GMSY  +    
Sbjct: 450 AN-SRSSLHLNVAACYQKMGEYRKSIDTCNKVLEANPVHVK---ALYRRGMSYMLL---- 501

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
                      +   +++    +S     A   +   +  +   E
Sbjct: 502 ----GDFDDAKKDFEKMIAVDKSSE--PDATAALNKLKQTIQETE 540



 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 36/93 (38%), Gaps = 5/93 (5%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           +L      +++  Y N  + +          ++ +   + +   Y K GEY  +I     
Sbjct: 422 ELAKAKYEKVLREY-NHVHPQDDDEGKIFANSRSSLH-LNVAACYQKMGEYRKSIDTCNK 479

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           VL          +A+ R   +Y+ L   D+A++
Sbjct: 480 VLEANP---VHVKALYRRGMSYMLLGDFDDAKK 509


>gi|330506325|ref|YP_004382753.1| tetratricopeptide repeat-containing protein [Methanosaeta concilii
           GP-6]
 gi|328927133|gb|AEB66935.1| Tetratricopeptide repeat protein [Methanosaeta concilii GP-6]
          Length = 315

 Score = 49.0 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 30/234 (12%), Positives = 66/234 (28%), Gaps = 32/234 (13%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQC 83
            I    A   +      +               +E + +   + L+    + A E + + 
Sbjct: 5   FIALVCAALTMQCASAFAEDTASYWLDKGNESCKEAFNESGNMTLRNLILTDAVESYEKA 64

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
            +  P + +   + L  A   +  G Y +A       I   P + +     Y+    Y +
Sbjct: 65  IQIEPHSSL---AWLKKAIAYFEMGNYIEALDSVNRSIEIDPVNAD---ALYMKAGFYGE 118

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
             R        T+  LQ  +  +E                               +    
Sbjct: 119 TGR--------TRDALQAFNETLEVDPERIDAW-----------------FWKADFLASM 153

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           G Y  A+  +   +    ++ +A  +          + L D+A+   ++  E Y
Sbjct: 154 GSYEEALNAYNRTIEIDPESMNAARSWDSKSYVLKKMGLEDQAKSAAAMAAETY 207


>gi|125973898|ref|YP_001037808.1| tetratricopeptide TPR_2 [Clostridium thermocellum ATCC 27405]
 gi|256005019|ref|ZP_05429990.1| Tetratricopeptide TPR_2 repeat protein [Clostridium thermocellum
           DSM 2360]
 gi|281418061|ref|ZP_06249081.1| Tetratricopeptide TPR_2 repeat protein [Clostridium thermocellum
           JW20]
 gi|125714123|gb|ABN52615.1| Tetratricopeptide TPR_2 [Clostridium thermocellum ATCC 27405]
 gi|255990987|gb|EEU01098.1| Tetratricopeptide TPR_2 repeat protein [Clostridium thermocellum
           DSM 2360]
 gi|281409463|gb|EFB39721.1| Tetratricopeptide TPR_2 repeat protein [Clostridium thermocellum
           JW20]
 gi|316939899|gb|ADU73933.1| Tetratricopeptide TPR_1 repeat-containing protein [Clostridium
           thermocellum DSM 1313]
          Length = 385

 Score = 49.0 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 50/161 (31%), Gaps = 34/161 (21%)

Query: 49  DSVTDVRYQREVYEKAVLFLK------EQNFSKAYEYFNQCSRDFPFA------------ 90
           D+  +V+ Q + Y  A   L+      +  + +A +                        
Sbjct: 232 DTFEEVKKQVDYYLNASKLLQIEKYASQNQYREAADLLLLLKNTAFTGVEKEKFDKLSQD 291

Query: 91  --GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV---YYLVGMSYAQMI 145
               A +         Y+   YQ+A    E +      S N  Y     Y +G+ Y ++ 
Sbjct: 292 VMPKAAQEEYNKGRELYNRKNYQEAV---ERFERSRSYSDNWRYAVNNLYYLGVCYQEL- 347

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
                    T   L+    +V +Y N+ Y   +R  +   R
Sbjct: 348 -------NNTTKALEIFEEVVNKYPNTSYAGYSRERINYIR 381



 Score = 38.9 bits (90), Expect = 0.81,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 31/77 (40%)

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           A +E   GR    R  Y  A+ RF+   +   +  +A   +  L   Y  L    +A E+
Sbjct: 297 AQEEYNKGRELYNRKNYQEAVERFERSRSYSDNWRYAVNNLYYLGVCYQELNNTTKALEI 356

Query: 250 VSLIQERYPQGYWARYV 266
              +  +YP   +A Y 
Sbjct: 357 FEEVVNKYPNTSYAGYS 373


>gi|149910557|ref|ZP_01899196.1| hypothetical protein PE36_02549 [Moritella sp. PE36]
 gi|149806400|gb|EDM66373.1| hypothetical protein PE36_02549 [Moritella sp. PE36]
          Length = 252

 Score = 49.0 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 44/117 (37%), Gaps = 22/117 (18%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
           +  KY +A    + +I+ YPES+     +Y +G+    + +D   D            +I
Sbjct: 143 NERKYDEAIPALQSFISTYPESELAANAHYWLGL---LLRKDNKND-----EAKVEFEKI 194

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
           V +Y  S     +   +     QLA             G    A   F+LV+ +Y +
Sbjct: 195 VTQYPASNKRADSLQKL----GQLAK----------LTGSNSEAKRYFELVIKDYPN 237



 Score = 43.2 bits (101), Expect = 0.037,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 45/135 (33%), Gaps = 25/135 (18%)

Query: 61  YEKAVLFL-KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY-------SAGKYQQ 112
           Y  A+  +  E+ + +A          +P + +A       A   Y          K  +
Sbjct: 134 YNYAIKLIKNERKYDEAIPALQSFISTYPESELA-------ANAHYWLGLLLRKDNKNDE 186

Query: 113 AASLGEEYITQYPES-KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           A    E+ +TQYP S K  D           Q +  +     +     +Y   +++ Y N
Sbjct: 187 AKVEFEKIVTQYPASNKRAD---------SLQKLGQLAKLTGSNSEAKRYFELVIKDYPN 237

Query: 172 SPYVKGARFYVTVGR 186
               K A+  +   +
Sbjct: 238 DSVAKLAKQELAALK 252



 Score = 39.3 bits (91), Expect = 0.64,   Method: Composition-based stats.
 Identities = 17/132 (12%), Positives = 42/132 (31%), Gaps = 14/132 (10%)

Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           L G         +  ++R     +  +   +  Y  S     A +++ +           
Sbjct: 128 LTGKDSYNYAIKLIKNERKYDEAIPALQSFISTYPESELAANAHYWLGLLLR-------- 179

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
                 K  +   A   F+ ++  Y  +    +++ +L +         EA+    L+ +
Sbjct: 180 ------KDNKNDEAKVEFEKIVTQYPASNKRADSLQKLGQLAKLTGSNSEAKRYFELVIK 233

Query: 256 RYPQGYWARYVE 267
            YP    A+  +
Sbjct: 234 DYPNDSVAKLAK 245


>gi|56750099|ref|YP_170800.1| CytB protein [Synechococcus elongatus PCC 6301]
 gi|81300440|ref|YP_400648.1| TPR repeat-containing protein [Synechococcus elongatus PCC 7942]
 gi|56685058|dbj|BAD78280.1| CytB protein [Synechococcus elongatus PCC 6301]
 gi|81169321|gb|ABB57661.1| TPR repeat [Synechococcus elongatus PCC 7942]
          Length = 299

 Score = 49.0 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 50/181 (27%), Gaps = 31/181 (17%)

Query: 67  FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
            L  + + +A +  +      P         L      Y  G+ Q A +  ++ + Q P 
Sbjct: 68  RLSLERYEEAIKDCSVALDLQPHEPET---WLNRGLAYYRQGQSQAAIADFDQLLQQSPT 124

Query: 127 SKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
               DY  YY  G++Y         D    +  +    + +ER   +        +    
Sbjct: 125 ----DYRAYYNRGLAY--------LDLAQPEQAIADFQQALERLPATEIGAAVDLHTDRC 172

Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
             +L             R +   A+      L        A  A      AY  L     
Sbjct: 173 MGEL------------HRAQPGPAVSACSQALELQP---SAARARYLRALAYWQLHQPQA 217

Query: 246 A 246
           A
Sbjct: 218 A 218


>gi|294627091|ref|ZP_06705679.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292598524|gb|EFF42673.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 609

 Score = 49.0 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 38/111 (34%), Gaps = 9/111 (8%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           ++    +      C L   +  ++ D  L    D   Q+ + +  V   ++ +F+ A + 
Sbjct: 324 FRRRAVVAVLATACVLPLAQPANAADGTLWQRADQVQQQRL-DAGVQAYRKGDFAAAQKA 382

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           F              + L          G+Y  A +  +  + Q+P  ++ 
Sbjct: 383 FEAVP--------TDEGLYNLGNALARQGQYDAAIAAYDRVLKQHPNQQDA 425


>gi|32477301|ref|NP_870295.1| hypothetical protein RB12056 [Rhodopirellula baltica SH 1]
 gi|32447852|emb|CAD77370.1| conserved hypothetical protein containing TPR domain
           [Rhodopirellula baltica SH 1]
          Length = 1113

 Score = 49.0 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 71/224 (31%), Gaps = 36/224 (16%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR------DFPFAGVAR-KS 96
           +++   +       +  Y+   L   EQ ++ A EYF             PFA  A+  +
Sbjct: 614 KELIRSNGESRMADQARYKLGQLANGEQQYAAAIEYFEPILASKRDAGLLPFARYAKGMA 673

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
            L        + ++++AA    E I Q P+    D      G++Y  + R+         
Sbjct: 674 EL-------QSQQHERAAESFSELIDQNPDHTLSDDALLSRGIAYRHLNREAD------- 719

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                ++  ++       +  A + + +     +                V A    Q +
Sbjct: 720 -SRNDLNAYLDSKPTGNNLGHALYELALLDQNASQT--------------VQAAESLQRI 764

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           +    D    ++ +  L  +       D+A      +  +YP  
Sbjct: 765 VDEVPDYPDMDKVLYELGWSLRESGKDDQALTKFEQLIAKYPDN 808



 Score = 47.0 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 64/196 (32%), Gaps = 35/196 (17%)

Query: 75  KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD--- 131
           ++   ++   ++ P + +  ++       QY+ G+  +A       +       ++    
Sbjct: 150 ESIATYDTLIKEIPDSRLLDRAYFYRGEAQYALGELDKAIESYNAMMKL----DDIASSA 205

Query: 132 ---YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
                 Y  G++  +        Q+          ++++   +S  V      +      
Sbjct: 206 LRCDALYARGVALEE--------QKNYDQAQSSYQQLLQACADSDLVVDVEIRMGDM--H 255

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA--MARLVEAYVALALMDEA 246
           L   E++             A+ RF  V+ N +DA   ++A    R   AY       +A
Sbjct: 256 LLQGEMQ------------KAVERFDSVVTN-ADATAEDKAYSFFRQGYAYAQDGDPTKA 302

Query: 247 REVVSLIQERYPQGYW 262
                 +  ++PQ  +
Sbjct: 303 SASYEKLLTQFPQSPY 318



 Score = 45.5 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 61/171 (35%), Gaps = 26/171 (15%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y K +  L+ Q   +A E F++     P   ++  +LL          +   + +    Y
Sbjct: 668 YAKGMAELQSQQHERAAESFSELIDQNPDHTLSDDALLSRGIAYRHLNREADSRNDLNAY 727

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK--LMLQYMSRIVERYTNSPYVKGA 178
           +   P   N+ +  Y + +           DQ A++     + + RIV+   + P +   
Sbjct: 728 LDSKPTGNNLGHALYELAL----------LDQNASQTVQAAESLQRIVDEVPDYPDMDKV 777

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
            + +                   + G+   A+ +F+ ++A Y D     +A
Sbjct: 778 LYELGWSLR--------------ESGKDDQALTKFEQLIAKYPDNALVADA 814



 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 12/135 (8%), Positives = 36/135 (26%), Gaps = 17/135 (12%)

Query: 39   ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
                S     D       +  +        +   +  A  +++     FP      +   
Sbjct: 918  ADNDSAKTVRDKAERQVRELILLHGGQSAAQLGQYEDAIGWYDALRERFPATTYLPQVFY 977

Query: 99   MSAFVQYSAGKYQQAA----SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
               F   +AG  ++A      + + +      S+      +++G  +           + 
Sbjct: 978  EIGFAAQNAGDDEKALKFYSEVADNF-----RSEIAARARFMMGEIHFAN--------KT 1024

Query: 155  TKLMLQYMSRIVERY 169
                +    R++  +
Sbjct: 1025 FDKAIPEFQRVMFGF 1039



 Score = 39.7 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 71/216 (32%), Gaps = 30/216 (13%)

Query: 52  TDVRYQREVYE---KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
            D   + + Y    +   + ++ + +KA   + +    FP +  A  + L SA   Y AG
Sbjct: 275 ADATAEDKAYSFFRQGYAYAQDGDPTKASASYEKLLTQFPQSPYAAAATLASAQTLYQAG 334

Query: 109 KYQQAASLGEEYIT-QYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               AAS    +                ++L  +      RD      A K      S +
Sbjct: 335 DLSGAAS---RFRDVLQGTDPVAATESAHWLARIDLGIANRDPSRTAEAAKSAYDVASEL 391

Query: 166 VERYTNSPYVK----GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
           + +     +       A   +++  ++L                   A  ++Q + + +S
Sbjct: 392 IAKGPQGSFAVALKLDAAEALSLQPDRLND-----------------AFEQYQSIASEHS 434

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           D   A  A+       + L   ++A ++    + ++
Sbjct: 435 DHPLAPRALYNAAFVALQLGNTEQAVKLADSFESKF 470



 Score = 39.3 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 47/130 (36%), Gaps = 15/130 (11%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D  +       +Y + V   +++N+ +A   + Q  +    + +     +    +    G
Sbjct: 200 DIASSALRCDALYARGVALEEQKNYDQAQSSYQQLLQACADSDLVVDVEIRMGDMHLLQG 259

Query: 109 KYQQAASLGEEY----ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           + Q+A    E +          +++  Y ++  G +YAQ       D            +
Sbjct: 260 EMQKAV---ERFDSVVTNADATAEDKAYSFFRQGYAYAQ-----DGDPT---KASASYEK 308

Query: 165 IVERYTNSPY 174
           ++ ++  SPY
Sbjct: 309 LLTQFPQSPY 318



 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 37/97 (38%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
             T       +YE A+L        +A E   +   + P      K L    +    +GK
Sbjct: 731 KPTGNNLGHALYELALLDQNASQTVQAAESLQRIVDEVPDYPDMDKVLYELGWSLRESGK 790

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
             QA +  E+ I +YP++  V    Y VG  + +  +
Sbjct: 791 DDQALTKFEQLIAKYPDNALVADAAYFVGQDHYRNSK 827



 Score = 35.5 bits (81), Expect = 8.5,   Method: Composition-based stats.
 Identities = 35/256 (13%), Positives = 69/256 (26%), Gaps = 63/256 (24%)

Query: 48   LDSVTDVRYQRE-VYEKAVLFLKEQNFSKAYEYFNQCSRDFP------------------ 88
            +D V D     + +YE      +     +A   F Q    +P                  
Sbjct: 765  VDEVPDYPDMDKVLYELGWSLRESGKDDQALTKFEQLIAKYPDNALVADAAYFVGQDHYR 824

Query: 89   FAGVA-------------------RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
             +                       KSL    +  Y   KY +A +  +           
Sbjct: 825  NSKWGDAAAAFQIAADKSNDLDLKEKSLYRLGWCFYKQQKYAEAEAAFKR---------- 874

Query: 130  VDYVYYLVG---MSYAQMIRDVPYDQRATKLMLQYM---SRIVERYTNSPYV--KGARFY 181
              YV    G   +    MI +  + Q   +  L+        +E   +S       A   
Sbjct: 875  -QYVEVQQGGLLLDSMMMIGESRFKQEQYETALRAYTKAREKIEADNDSAKTVRDKAERQ 933

Query: 182  VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
            V           +  G+   + G+Y  AI  +  +   +    +  +    +  A     
Sbjct: 934  VRELIL------LHGGQSAAQLGQYEDAIGWYDALRERFPATTYLPQVFYEIGFAAQNAG 987

Query: 242  LMDEAREVVSLIQERY 257
              ++A +  S + + +
Sbjct: 988  DDEKALKFYSEVADNF 1003



 Score = 35.5 bits (81), Expect = 9.3,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 30/81 (37%), Gaps = 8/81 (9%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
             R +Y  A + L+  N  +A +  +     F    +A  +  + A    ++G    A+S
Sbjct: 439 APRALYNAAFVALQLGNTEQAVKLADSFESKFSSDPLAPDASFVGAEALLASGD---ASS 495

Query: 116 LGEEYITQ-----YPESKNVD 131
             E Y T      + +   + 
Sbjct: 496 AAERYQTLIDDAKHRDHPQLA 516


>gi|311234963|gb|ADP87817.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
           vulgaris RCH1]
          Length = 1070

 Score = 49.0 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 55/189 (29%), Gaps = 29/189 (15%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
             D       +       ++  + KA + F    ++ P +   R+S +  A   +  G  
Sbjct: 529 PHDDNIPLAYFYLGEDQFRKGQYQKAADQFQYILQNHPESRYVRESSVFLARSLHRLGYL 588

Query: 111 QQAASLGE----EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
           +QA+++ +     +   Y E+             Y  M  DV                  
Sbjct: 589 EQASAIMDFVDKRWPRLYLETPE-----------YLLMAADVETQTGRLDQARASYWTYF 637

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
             +            +              G  Y ++ +  AA   ++  L  + D +  
Sbjct: 638 NIHPEGAENDVVLAKL--------------GDIYAQQKQDKAAREIYEEALRRFPDKDGG 683

Query: 227 EEAMARLVE 235
             A+ RL E
Sbjct: 684 LIALLRLTE 692



 Score = 46.3 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 76/222 (34%), Gaps = 31/222 (13%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLL---M 99
           D   + V       ++  +A   +  +++  A E         P   + +  + L     
Sbjct: 405 DEKGNPVPPPPDPPQLLAEAKSLISTKDWPGALERLGLLKGL-PDIPSDMREEVLYLISD 463

Query: 100 SAFVQYSA---GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
           + F Q+       Y+       E +     S  V              +  +      T+
Sbjct: 464 TLFAQHKDTILEGYESIMDATSEAMNYNIRSPRVP--------LALLRLGLLNLRAGNTR 515

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
               Y + +  +Y +   +  A FY+   +               ++G+Y  A  +FQ +
Sbjct: 516 EAEAYFALMKRQYPHDDNIPLAYFYLGEDQ--------------FRKGQYQKAADQFQYI 561

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           L N+ ++ +  E+   L  +   L  +++A  ++  + +R+P
Sbjct: 562 LQNHPESRYVRESSVFLARSLHRLGYLEQASAIMDFVDKRWP 603


>gi|119510065|ref|ZP_01629205.1| hypothetical protein N9414_19622 [Nodularia spumigena CCY9414]
 gi|119465252|gb|EAW46149.1| hypothetical protein N9414_19622 [Nodularia spumigena CCY9414]
          Length = 219

 Score = 49.0 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 39/131 (29%), Gaps = 20/131 (15%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP---FAGVARKSLLMS 100
             +     T    + ++ ++A     + +F+ A E      + FP   F           
Sbjct: 46  EKLAQSRGTPEEERSQLIQQAKTLSSQGDFTGAEENLRTLIKKFPRYAFGHF------EL 99

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
             V +   K ++A     E I            Y  +G+ YA         Q   +  + 
Sbjct: 100 GNVLFRQEKPEEAIKAYREAIRLNSNH---ALAYNGIGLVYAS--------QSLWEEAIA 148

Query: 161 YMSRIVERYTN 171
              + +E   N
Sbjct: 149 AYQKALEINPN 159


>gi|150397823|ref|YP_001328290.1| Tol-Pal system YbgF [Sinorhizobium medicae WSM419]
 gi|150029338|gb|ABR61455.1| Tol-Pal system YbgF [Sinorhizobium medicae WSM419]
          Length = 345

 Score = 49.0 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 41/126 (32%), Gaps = 14/126 (11%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             ++Y+ A   +   ++  A + F      FP    A  +       QYS GKY  A   
Sbjct: 221 PGDLYQSAYGHVLSGDYGIAEQEFRNYLEAFPSGDKAADASFWMGEAQYSQGKYSDA--- 277

Query: 117 GEEYITQYPES---KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
            + ++  +           +   +GMS   +           +     +  + +RY  + 
Sbjct: 278 AKTFLNAHQSHGKSPKAPEMLLKLGMSLGALDNK--------ETACATLREVGKRYPKAS 329

Query: 174 YVKGAR 179
               A+
Sbjct: 330 PAVKAK 335



 Score = 42.4 bits (99), Expect = 0.071,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 36/104 (34%), Gaps = 14/104 (13%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
             Q     +E + +      A F++   +                +G+Y  A   F    
Sbjct: 240 AEQEFRNYLEAFPSGDKAADASFWMGEAQ--------------YSQGKYSDAAKTFLNAH 285

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            ++  +  A E + +L  +  AL   + A   +  + +RYP+  
Sbjct: 286 QSHGKSPKAPEMLLKLGMSLGALDNKETACATLREVGKRYPKAS 329


>gi|18406066|ref|NP_565985.1| PP5.2 (PROTEIN PHOSPHATASE 5.2); phosphoprotein phosphatase/
           protein binding / protein serine/threonine phosphatase
           [Arabidopsis thaliana]
 gi|16930441|gb|AAL31906.1|AF419574_1 At2g42810/F7D19.19 [Arabidopsis thaliana]
 gi|20197966|gb|AAD21727.2| putative phosphoprotein phosphatase [Arabidopsis thaliana]
 gi|33589766|gb|AAQ22649.1| At2g42810/F7D19.19 [Arabidopsis thaliana]
 gi|330255077|gb|AEC10171.1| serine/threonine-protein phosphatase 5 [Arabidopsis thaliana]
          Length = 484

 Score = 49.0 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 41/143 (28%), Gaps = 29/143 (20%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCS---RDFPFAGVARKSLLMSAFVQ 104
           +  +DV    E   +A    K   +S A + +         +  +   A ++     F  
Sbjct: 5   NENSDVSRAEEFKSQANEAFKGHKYSSAIDLYTKAIELNSNNAVY--WANRA-----FAH 57

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
               +Y  A     + I       +  Y   YY  G +Y  M           K  L+  
Sbjct: 58  TKLEEYGSAIQDASKAIEV-----DSRYSKGYYRRGAAYLAM--------GKFKDALKDF 104

Query: 163 SRIVERYTNSPYVKGARFYVTVG 185
            ++     N P    A   +   
Sbjct: 105 QQVKRLSPNDP---DATRKLKEC 124


>gi|46581300|ref|YP_012108.1| TPR domain-containing protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46450721|gb|AAS97368.1| TPR domain protein [Desulfovibrio vulgaris str. Hildenborough]
          Length = 1076

 Score = 49.0 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 55/189 (29%), Gaps = 29/189 (15%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
             D       +       ++  + KA + F    ++ P +   R+S +  A   +  G  
Sbjct: 535 PHDDNIPLAYFYLGEDQFRKGQYQKAADQFQYILQNHPESRYVRESSVFLARSLHRLGYL 594

Query: 111 QQAASLGE----EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
           +QA+++ +     +   Y E+             Y  M  DV                  
Sbjct: 595 EQASAIMDFVDKRWPRLYLETPE-----------YLLMAADVETQTGRLDQARASYWTYF 643

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
             +            +              G  Y ++ +  AA   ++  L  + D +  
Sbjct: 644 NIHPEGAENDVVLAKL--------------GDIYAQQKQDKAAREIYEEALRRFPDKDGG 689

Query: 227 EEAMARLVE 235
             A+ RL E
Sbjct: 690 LIALLRLTE 698



 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 76/222 (34%), Gaps = 31/222 (13%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLL---M 99
           D   + V       ++  +A   +  +++  A E         P   + +  + L     
Sbjct: 411 DEKGNPVPPPPDPPQLLAEAKSLISTKDWPGALERLGLLKGL-PDIPSDMREEVLYLISD 469

Query: 100 SAFVQYSA---GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
           + F Q+       Y+       E +     S  V              +  +      T+
Sbjct: 470 TLFAQHKDTILEGYESIMDATSEAMNYNIRSPRVP--------LALLRLGLLNLRAGNTR 521

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
               Y + +  +Y +   +  A FY+   +               ++G+Y  A  +FQ +
Sbjct: 522 EAEAYFALMKRQYPHDDNIPLAYFYLGEDQ--------------FRKGQYQKAADQFQYI 567

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           L N+ ++ +  E+   L  +   L  +++A  ++  + +R+P
Sbjct: 568 LQNHPESRYVRESSVFLARSLHRLGYLEQASAIMDFVDKRWP 609


>gi|254294752|ref|YP_003060775.1| tol-pal system protein YbgF [Hirschia baltica ATCC 49814]
 gi|254043283|gb|ACT60078.1| tol-pal system protein YbgF [Hirschia baltica ATCC 49814]
          Length = 284

 Score = 49.0 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 16/131 (12%), Positives = 42/131 (32%), Gaps = 10/131 (7%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           +S+   ++ + +     +++ +A   L + ++  A   F       P    A ++     
Sbjct: 145 ASKPADIEDLPED--PSKLFRQAKNLLLKGDYPAAETAFAHLVSTHPDVPEAAEAQYWLG 202

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
                   + +AA      I  YP++            S  ++ R +      T      
Sbjct: 203 ESLLIQEAFPEAAEAYVALIRNYPDAPKAPD-------SLVKLARSL-RMMGDTTQACGA 254

Query: 162 MSRIVERYTNS 172
           ++ +   Y  +
Sbjct: 255 LTELSNLYPQT 265



 Score = 44.7 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 38/105 (36%), Gaps = 14/105 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                 + +V  + + P    A++++                  L +  +  A   +  +
Sbjct: 176 AAETAFAHLVSTHPDVPEAAEAQYWLGESL--------------LIQEAFPEAAEAYVAL 221

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           + NY DA  A +++ +L  +   +    +A   ++ +   YPQ  
Sbjct: 222 IRNYPDAPKAPDSLVKLARSLRMMGDTTQACGALTELSNLYPQTN 266



 Score = 40.5 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 11/76 (14%), Positives = 24/76 (31%), Gaps = 8/76 (10%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           G Y  A +     ++ +P+        Y +G S           Q A     +    ++ 
Sbjct: 172 GDYPAAETAFAHLVSTHPDVPEAAEAQYWLGESL--------LIQEAFPEAAEAYVALIR 223

Query: 168 RYTNSPYVKGARFYVT 183
            Y ++P    +   + 
Sbjct: 224 NYPDAPKAPDSLVKLA 239



 Score = 39.3 bits (91), Expect = 0.50,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 2/69 (2%)

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           +G+Y AA   F  +++ + D   A EA   L E+ +      EA E    +   YP    
Sbjct: 171 KGDYPAAETAFAHLVSTHPDVPEAAEAQYWLGESLLIQEAFPEAAEAYVALIRNYPDA-- 228

Query: 263 ARYVETLVK 271
            +  ++LVK
Sbjct: 229 PKAPDSLVK 237


>gi|120601520|ref|YP_965920.1| TPR repeat-containing protein [Desulfovibrio vulgaris DP4]
 gi|120561749|gb|ABM27493.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio vulgaris DP4]
          Length = 1070

 Score = 49.0 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 55/189 (29%), Gaps = 29/189 (15%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
             D       +       ++  + KA + F    ++ P +   R+S +  A   +  G  
Sbjct: 529 PHDDNIPLAYFYLGEDQFRKGQYQKAADQFQYILQNHPESRYVRESSVFLARSLHRLGYL 588

Query: 111 QQAASLGE----EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
           +QA+++ +     +   Y E+             Y  M  DV                  
Sbjct: 589 EQASAIMDFVDKRWPRLYLETPE-----------YLLMAADVETQTGRLDQARASYWTYF 637

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
             +            +              G  Y ++ +  AA   ++  L  + D +  
Sbjct: 638 NIHPEGAENDVVLAKL--------------GDIYAQQKQDKAAREIYEEALRRFPDKDGG 683

Query: 227 EEAMARLVE 235
             A+ RL E
Sbjct: 684 LIALLRLTE 692



 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 76/222 (34%), Gaps = 31/222 (13%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLL---M 99
           D   + V       ++  +A   +  +++  A E         P   + +  + L     
Sbjct: 405 DEKGNPVPPPPDPPQLLAEAKSLISTKDWPGALERLGLLKGL-PDIPSDMREEVLYLISD 463

Query: 100 SAFVQYSA---GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
           + F Q+       Y+       E +     S  V              +  +      T+
Sbjct: 464 TLFAQHKDSILEGYESIMDATSEAMNYNIRSPRVP--------LALLRLGLLNLRAGNTR 515

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
               Y + +  +Y +   +  A FY+   +               ++G+Y  A  +FQ +
Sbjct: 516 EAEAYFALMKRQYPHDDNIPLAYFYLGEDQ--------------FRKGQYQKAADQFQYI 561

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           L N+ ++ +  E+   L  +   L  +++A  ++  + +R+P
Sbjct: 562 LQNHPESRYVRESSVFLARSLHRLGYLEQASAIMDFVDKRWP 603


>gi|221134412|ref|ZP_03560717.1| tetratricopeptide TPR_2 [Glaciecola sp. HTCC2999]
          Length = 272

 Score = 49.0 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 45/135 (33%), Gaps = 25/135 (18%)

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           K+ +              A    E+++  YP+S+     +Y +G  +           + 
Sbjct: 156 KAAVDLI---LKQRDTAAAIPALEKFVDDYPQSRFKPNAHYWLGQIFYNG--------KN 204

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
            +   ++   +  +Y  S  V  A   + +    L+                  A   F+
Sbjct: 205 WQDAKKHFGTLYTQYPTSNKVADATLKLGIIAKSLSDN--------------KNAREYFE 250

Query: 215 LVLANYSDAEHAEEA 229
            V+AN++D   A+ A
Sbjct: 251 KVIANHADTTSAKLA 265



 Score = 44.3 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 41/127 (32%), Gaps = 14/127 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            +   D+   QR T   +  + + V+ Y  S +   A +++                +Y 
Sbjct: 155 YKAAVDLILKQRDTAAAIPALEKFVDDYPQSRFKPNAHYWLGQI-------------FY- 200

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
               +  A   F  +   Y  +    +A  +L     +L+    ARE    +   +    
Sbjct: 201 NGKNWQDAKKHFGTLYTQYPTSNKVADATLKLGIIAKSLSDNKNAREYFEKVIANHADTT 260

Query: 262 WARYVET 268
            A+  + 
Sbjct: 261 SAKLAQE 267



 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 53/149 (35%), Gaps = 15/149 (10%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
           Q S  +     T        Y+ AV   LK+++ + A     +   D+P +     +   
Sbjct: 135 QPSASLDASVATQSDNDAVDYKAAVDLILKQRDTAAAIPALEKFVDDYPQSRFKPNAHYW 194

Query: 100 SAFVQYSAGKYQQAASLGEEYITQ---YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
              + Y+   +Q A    + + T    YP S  V      +G+    +  +        K
Sbjct: 195 LGQIFYNGKNWQDAK---KHFGTLYTQYPTSNKVADATLKLGIIAKSLSDN--------K 243

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVG 185
              +Y  +++  + ++   K A+  + + 
Sbjct: 244 NAREYFEKVIANHADTTSAKLAQEQINLL 272


>gi|307154460|ref|YP_003889844.1| Lytic transglycosylase catalytic [Cyanothece sp. PCC 7822]
 gi|306984688|gb|ADN16569.1| Lytic transglycosylase catalytic [Cyanothece sp. PCC 7822]
          Length = 724

 Score = 49.0 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 34/249 (13%), Positives = 66/249 (26%), Gaps = 59/249 (23%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           + + L     +   R  Y  A   +K+     A  +     +++P   +A   LL     
Sbjct: 74  KTIALSEKPSLERSRARYILATELIKKYEGGPALRFLEGLEQEYPT--LAPWILLKQGRG 131

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
              + +   A    ++ I  YP    V    Y +G           YD +          
Sbjct: 132 YELSNENDLAQETWKKLIQTYPSDPVVAEALYYLG----------KYDPKYWDQA----- 176

Query: 164 RIVERYTNSPYVKGARFY------------------------VTVGRNQLAAK---EVE- 195
             + ++ N P                                +   R++L      E+  
Sbjct: 177 --ISQFPNHPRTWEIINKRLKDNPKQPKLMLLLVKYNAFDPSMNAVRDRLVKDYAPELTP 234

Query: 196 -----IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
                IG  Y + G+Y       +     Y  A      + R            +A++  
Sbjct: 235 QDWEVIGNGYWEFGDY-------RKATQAYYKASRTPVNLYRYARGLHLSGQKAQAKQAY 287

Query: 251 SLIQERYPQ 259
             +   +P 
Sbjct: 288 QQLVRSFPD 296



 Score = 40.9 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 76/226 (33%), Gaps = 28/226 (12%)

Query: 38  WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
           WE    R          R    +Y  A         ++A + + Q  R FP A    ++L
Sbjct: 245 WEFGDYRKATQAYYKASRTPVNLYRYARGLHLSGQKAQAKQAYQQLVRSFPDAPETGEAL 304

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
           +             +A    +  I ++P             +  A+++  +   Q A+K 
Sbjct: 305 MRLV----GLSGSSEALGYLDYAINKFPL--QAPDAL----LKRAELLDLLNSKQAASK- 353

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
                 +++ +Y NS                 A    +I + Y  +G+ V A    Q + 
Sbjct: 354 ---ARQQLLVQYPNSEAA--------------AGYRWKIAKSYADKGDLVKAWEWAQPIT 396

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
            N  D   A +A   + +    L    +A++       RYPQ Y+A
Sbjct: 397 INAPDTTVAAKAGFWVGKWAQKLNRPQDAKDAFLHTLARYPQSYYA 442


>gi|120554617|ref|YP_958968.1| tetratricopeptide domain-containing protein [Marinobacter aquaeolei
           VT8]
 gi|120324466|gb|ABM18781.1| Tetratricopeptide domain protein [Marinobacter aquaeolei VT8]
          Length = 258

 Score = 49.0 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 43/129 (33%), Gaps = 22/129 (17%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
             Y  A +   E++  YPE       YY +G  Y    +         +   Q  + +  
Sbjct: 150 KDYDTAITRLYEFVDTYPEGDLTVNAYYWLGEVYLAKPQ--------LEQARQAFTIVAT 201

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
           RY++      A + + V  ++L  K                A  R   V+  Y D+  AE
Sbjct: 202 RYSDHRKAPDAVYKLGVTLDRLGEK--------------GEARRRMTSVVEQYPDSGAAE 247

Query: 228 EAMARLVEA 236
            A   L  A
Sbjct: 248 LAKKYLDSA 256



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/136 (12%), Positives = 51/136 (37%), Gaps = 9/136 (6%)

Query: 52  TDVRYQREVYEKAVLFL-KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
           +    +++ Y   +  +  ++++  A     +    +P   +   +      V  +  + 
Sbjct: 130 SPEPEEQKTYNDIIDLIRNKKDYDTAITRLYEFVDTYPEGDLTVNAYYWLGEVYLAKPQL 189

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           +QA        T+Y + +      Y +G++  ++               + M+ +VE+Y 
Sbjct: 190 EQARQAFTIVATRYSDHRKAPDAVYKLGVTLDRL--------GEKGEARRRMTSVVEQYP 241

Query: 171 NSPYVKGARFYVTVGR 186
           +S   + A+ Y+   +
Sbjct: 242 DSGAAELAKKYLDSAQ 257



 Score = 40.5 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 44/119 (36%), Gaps = 14/119 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
              I D+  +++     +  +   V+ Y        A +++              G  YL
Sbjct: 139 YNDIIDLIRNKKDYDTAITRLYEFVDTYPEGDLTVNAYYWL--------------GEVYL 184

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            + +   A   F +V   YSD   A +A+ +L      L    EAR  ++ + E+YP  
Sbjct: 185 AKPQLEQARQAFTIVATRYSDHRKAPDAVYKLGVTLDRLGEKGEARRRMTSVVEQYPDS 243


>gi|310822352|ref|YP_003954710.1| hypothetical protein STAUR_5111 [Stigmatella aurantiaca DW4/3-1]
 gi|309395424|gb|ADO72883.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 268

 Score = 49.0 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 37/139 (26%), Gaps = 22/139 (15%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +    A      G  +      + +  Q P   + D   Y  G+    +I     D    
Sbjct: 148 AEFEQAVAALRTGNVEAGVVRLQAFAEQNPRHAHADNALYFSGL---GLIGLKDLD---- 200

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
               +   R++  Y     V      +   R              LK  +   A   +  
Sbjct: 201 -GASRLFERLINNYPAGDAVLDGMLRLAECR--------------LKLKQPEDARALYTR 245

Query: 216 VLANYSDAEHAEEAMARLV 234
           V+  +     A +A  RL 
Sbjct: 246 VITQFPGTAAATQAEQRLA 264



 Score = 41.3 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 27/77 (35%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           +         +Y   +  +  ++   A   F +   ++P        +L  A  +    +
Sbjct: 176 NPRHAHADNALYFSGLGLIGLKDLDGASRLFERLINNYPAGDAVLDGMLRLAECRLKLKQ 235

Query: 110 YQQAASLGEEYITQYPE 126
            + A +L    ITQ+P 
Sbjct: 236 PEDARALYTRVITQFPG 252



 Score = 38.6 bits (89), Expect = 0.87,   Method: Composition-based stats.
 Identities = 19/146 (13%), Positives = 39/146 (26%), Gaps = 8/146 (5%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
             +  D       +       +E+AV  L+  N           +   P    A  +L  
Sbjct: 129 SSAPADAPASEPVNTALLDAEFEQAVAALRTGNVEAGVVRLQAFAEQNPRHAHADNALYF 188

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
           S            A+ L E  I  YP    V        +     + +     +  +   
Sbjct: 189 SGLGLIGLKDLDGASRLFERLINNYPAGDAV--------LDGMLRLAECRLKLKQPEDAR 240

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVG 185
              +R++ ++  +     A   +   
Sbjct: 241 ALYTRVITQFPGTAAATQAEQRLASL 266


>gi|242279824|ref|YP_002991953.1| hypothetical protein Desal_2358 [Desulfovibrio salexigens DSM 2638]
 gi|242122718|gb|ACS80414.1| hypothetical protein Desal_2358 [Desulfovibrio salexigens DSM 2638]
          Length = 335

 Score = 49.0 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 37/75 (49%)

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           G Y+    +   A+  ++ ++  Y +  + E A+   +  ++ L   ++A E V   +E 
Sbjct: 261 GLYFYHLNDVNGALRSYRRIIREYHNTPYYENALYGAIRCFMQLGQNEKAAEYVRRYEEL 320

Query: 257 YPQGYWARYVETLVK 271
           +P G   + +++LV+
Sbjct: 321 FPDGNHVQGLDSLVR 335


>gi|241206182|ref|YP_002977278.1| tol-pal system protein YbgF [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240860072|gb|ACS57739.1| tol-pal system protein YbgF [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 328

 Score = 49.0 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 54/161 (33%), Gaps = 16/161 (9%)

Query: 33  CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
             +       +          +  + + Y+ A   +   ++S A + F Q    +P +  
Sbjct: 180 ATIGSGPIPDANTKTPQQTASLGSEADQYKAAYGHVLSGDYSTAEQEFTQYITHYPSSAR 239

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP---ESKNVDYVYYLVGMSYAQMIRDVP 149
           A  +        YS GKY +A    + ++  +     S+    +   +GMS A +     
Sbjct: 240 AADANFWLGEALYSQGKYNEA---AKTFLNAHQKYGTSEKAPEMLLKLGMSLAALDN--- 293

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
                T+     +  + +RY  +         V   + +LA
Sbjct: 294 -----TETACATLREVSKRYPKASRA--VISKVASEQKRLA 327



 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 37/104 (35%), Gaps = 14/104 (13%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
             Q  ++ +  Y +S     A F++                    +G+Y  A   F    
Sbjct: 223 AEQEFTQYITHYPSSARAADANFWLGEAL--------------YSQGKYNEAAKTFLNAH 268

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             Y  +E A E + +L  +  AL   + A   +  + +RYP+  
Sbjct: 269 QKYGTSEKAPEMLLKLGMSLAALDNTETACATLREVSKRYPKAS 312


>gi|253748233|gb|EET02493.1| Protein F54C1.5 [Giardia intestinalis ATCC 50581]
          Length = 673

 Score = 49.0 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 8/77 (10%)

Query: 68  LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
           +++Q + +A E         P    A  SLL  AF  YSAG Y+ A SL +E   ++P S
Sbjct: 18  IRDQEWDQAIEILKDQLAQHPGNR-AALSLL--AFCNYSAGNYEDAVSLYQELCQRHPTS 74

Query: 128 KNVDYVYYLVGMSYAQM 144
           +      Y + ++ A++
Sbjct: 75  ER-----YQLALANARL 86


>gi|83646050|ref|YP_434485.1| TPR repeat-containing protein [Hahella chejuensis KCTC 2396]
 gi|83634093|gb|ABC30060.1| FOG: TPR repeat [Hahella chejuensis KCTC 2396]
          Length = 605

 Score = 49.0 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 72/202 (35%), Gaps = 36/202 (17%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
            +++A+ + K+ +  KA   +            +A ++          +GK++ A S+ +
Sbjct: 291 YFQRALTYAKKDDHDKAVSDYQSALKDKALPENLAVQA----GDYFAQSGKHELAESVYK 346

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           + + +        + YY    S  Q+       Q          S +++ Y ++P     
Sbjct: 347 DLMKR----SETPFPYYQRLGSLYQL-------QNDASKAKAVYSDLLKTYPDNP----- 390

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
                          +  G ++    +Y AA   F+  L    D+     A A    A  
Sbjct: 391 ------------QSYLYAGSFHAFTRDYAAAADLFEKGLKLAPDSSSLRMAKAV---ALK 435

Query: 239 ALALMDEAREVVSLIQERYPQG 260
            L  +D+A++ + ++ +  P+ 
Sbjct: 436 QLGTLDKAQQEMEILVKNNPES 457



 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 29/224 (12%), Positives = 65/224 (29%), Gaps = 44/224 (19%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFL-KEQNFSKAYEYFNQCSRDF--PFAGVARK 95
           +   +   Y  ++ D      +  +A  +  +      A   +    +    PF    R 
Sbjct: 303 DHDKAVSDYQSALKDKALPENLAVQAGDYFAQSGKHELAESVYKDLMKRSETPFPYYQRL 362

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
             L             +A ++  + +  YP++       YL   S+    RD        
Sbjct: 363 GSL-----YQLQNDASKAKAVYSDLLKTYPDNPQS----YLYAGSFHAFTRDYA------ 407

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL--AAKEVEIGRYYLKRGEYVAAIPRF 213
                   + ++   +S  ++ A+         L  A +E+EI                 
Sbjct: 408 -AAADLFEKGLKLAPDSSSLRMAKAVALKQLGTLDKAQQEMEI----------------- 449

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQER 256
             ++ N  ++    E +  L   Y      D+A      +++  
Sbjct: 450 --LVKNNPES---HEGLFLLGSLYEEDKKTDKAIDAYRRVLRLN 488


>gi|149922944|ref|ZP_01911364.1| transmembrane sensor, putative [Plesiocystis pacifica SIR-1]
 gi|149816195|gb|EDM75702.1| transmembrane sensor, putative [Plesiocystis pacifica SIR-1]
          Length = 452

 Score = 49.0 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 49/129 (37%), Gaps = 14/129 (10%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
              + D+    +A     Q + R+ ER+  +     A         ++AA          
Sbjct: 336 MLDLADLARFNKARGDARQVLERLRERFPGTRSAGEA----AFLLGKMAA---------- 381

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           + G +  A   F+  L       H  +A+ RL+ +Y A    + AR+V +   ER P+G 
Sbjct: 382 EGGHWPKAATWFEAYLDEQPKGTHRSDALGRLMASYQAAGKQERARDVAADYLERDPKGA 441

Query: 262 WARYVETLV 270
            A     L+
Sbjct: 442 HAAKARELL 450


>gi|254785920|ref|YP_003073349.1| hypothetical protein TERTU_1850 [Teredinibacter turnerae T7901]
 gi|237684470|gb|ACR11734.1| TPR repeat domain protein [Teredinibacter turnerae T7901]
          Length = 947

 Score = 49.0 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 68/243 (27%), Gaps = 58/243 (23%)

Query: 73  FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
           +  A + + +    +P +    + L   A      GK  +A  + E+  +++P   N+  
Sbjct: 97  YLDAIKSYKEILEKYPNSPDNAEVLYQLAKAYDMEGKQAEALRMLEQLTSRHPYYPNIGE 156

Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV---------ERYTNSPYVKGARFYVT 183
            Y+  G  Y    R    +Q    +      +            RY    Y      YV 
Sbjct: 157 AYFRKGDIYFSAQRYKQAEQAYFAVTQSGAEKFQVNAHYMLGWSRYKQHNYRGSLTSYVY 216

Query: 184 VGRNQ---------LAA----------KEVEIG--------------------------- 197
           V +N          LA             + +                            
Sbjct: 217 VMKNLFGDASDVATLAKPQQSMVKDSLHSMSLALDKLGGAAAIKTVDGLDNAPYVWLLYE 276

Query: 198 ---RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
               +YL++  Y  +   F+  +  Y  +E A     +LVE Y        A E  +   
Sbjct: 277 TLGDFYLEKELYQESADAFKSYVLEYPRSEKAPNLHKKLVETYEQGGFPTAALEEKATYV 336

Query: 255 ERY 257
             Y
Sbjct: 337 AAY 339



 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 27/58 (46%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
             +  Y+ AI  ++ +L  Y ++    E + +L +AY       EA  ++  +  R+P
Sbjct: 92  YSKSYYLDAIKSYKEILEKYPNSPDNAEVLYQLAKAYDMEGKQAEALRMLEQLTSRHP 149


>gi|115376815|ref|ZP_01464039.1| Tgl protein [Stigmatella aurantiaca DW4/3-1]
 gi|115366177|gb|EAU65188.1| Tgl protein [Stigmatella aurantiaca DW4/3-1]
          Length = 193

 Score = 49.0 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 39/133 (29%), Gaps = 21/133 (15%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
               ++L +  + +A   + Q      +P   +A+       +  +  G   +A    + 
Sbjct: 48  NLGNVYLDQGRYDEAIRTYEQVLNDMLYPTPFIAQS---NLGWAYFKKGDTAKALENIKS 104

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR-ATKLMLQYMSRIVERYTNSPYVKGA 178
            +T  P                        YDQ   T+   +  SR  E   +   V  A
Sbjct: 105 AVTLNPN------------FCRGYQNLGFIYDQTGDTEEACRQFSRYREMCPD---VADA 149

Query: 179 RFYVTVGRNQLAA 191
                V + ++  
Sbjct: 150 YMREGVCQAKMGK 162


>gi|42528117|ref|NP_973215.1| cyclic nucleotide-binding protein [Treponema denticola ATCC 35405]
 gi|41819162|gb|AAS13134.1| cyclic nucleotide-binding protein [Treponema denticola ATCC 35405]
          Length = 333

 Score = 49.0 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 36/86 (41%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y KA    ++  F  AY+ ++          +   + + +    +S  +Y +   L   +
Sbjct: 211 YNKAEDLFEKGEFEAAYDQYHAVIEAGAGDEITDNAYIGAGKSLHSQKEYVRCLQLLTGF 270

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIR 146
           I+Q+P+S  +      +GM Y  M R
Sbjct: 271 ISQHPKSSKIGDALMYLGMCYMDMER 296


>gi|313143808|ref|ZP_07806001.1| paralysed flagella protein PflA [Helicobacter cinaedi CCUG 18818]
 gi|313128839|gb|EFR46456.1| paralysed flagella protein PflA [Helicobacter cinaedi CCUG 18818]
          Length = 786

 Score = 49.0 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 54/160 (33%), Gaps = 16/160 (10%)

Query: 44  RDVYLDSVT---DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
           +D+ +D      D     E Y      +   N  +A +  ++    +P     +  LL  
Sbjct: 163 KDLDIDRGPLHYDEGEDFEAYNHIKTLINNHNHIEAVKAIDETLIAYPQTIFTKDLLLYR 222

Query: 101 AFV--QYSA-GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
                 + +         +G ++I +YP   NV  V Y +G +YA        D +    
Sbjct: 223 LRALEHFDSVENSDMIVDMGIKWIKKYPTDSNVPEVLYYLGNAYA--------DMKIPNE 274

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
              Y  R +  Y  S Y+      + + +N     +  + 
Sbjct: 275 AKYYFERTISEYPESRYMP--LSKMALAKNFNTGSDSSVA 312



 Score = 42.0 bits (98), Expect = 0.099,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 18/46 (39%)

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           +  Y    +  E +  L  AY  + + +EA+         YP+  +
Sbjct: 246 IKKYPTDSNVPEVLYYLGNAYADMKIPNEAKYYFERTISEYPESRY 291


>gi|187735593|ref|YP_001877705.1| type II and III secretion system protein [Akkermansia muciniphila
           ATCC BAA-835]
 gi|187425645|gb|ACD04924.1| type II and III secretion system protein [Akkermansia muciniphila
           ATCC BAA-835]
          Length = 907

 Score = 49.0 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 33/239 (13%), Positives = 64/239 (26%), Gaps = 44/239 (18%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            +  S A      ++  ++R          +   ++  +     +E  + +A + +N   
Sbjct: 39  ALGSSYAGPGSYQYQSSAARTAMARREAQTQEAMQLLAEGRNLYREGKYKEALDKYNAAY 98

Query: 85  RDFPFAGVARK-----------SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
              P A +  +           + +  A      G+Y +A  L ++ I   P S  +   
Sbjct: 99  NMLPSAPINDQRKEAIANHIGDASIAVAQEYIKVGRYDEADKLLQDAIKLNPRSAKLA-- 156

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS-PYVKGAR--FYVTVGRNQLA 190
                    +   +   D   T   L                V+      ++  G   L 
Sbjct: 157 ---------KQTLEYMKDPIRTNPALT---------PEHVKNVEKVNTLLHMAYGYYDLG 198

Query: 191 AKEVEIGRYY--LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
             +  I  +   L    Y  A  R Q  +            MA    AY        A 
Sbjct: 199 DYDKAIAEFNKVLSIDPYNVAARRGQETVN--------RRRMAYYAAAYDETRSTMLAE 249


>gi|15612260|ref|NP_223913.1| flagellar functional protein [Helicobacter pylori J99]
 gi|4155785|gb|AAD06761.1| FLAGELLAR FUNCTIONAL PROTEIN [Helicobacter pylori J99]
          Length = 803

 Score = 49.0 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 49/137 (35%), Gaps = 9/137 (6%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             +T   Y    Y +A   +  Q +  A    ++  +++P     +   L+        G
Sbjct: 188 PLLTTKGYDLNAYLEAKKQMDSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIALGKLG 247

Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            K      +G ++I  YP   N+    Y V  +  +            K  ++Y  RI+ 
Sbjct: 248 IKKSLLIDIGTQWIKNYPTDPNIPEALYYVAKALDEN--------NNYKQAVRYYKRILL 299

Query: 168 RYTNSPYVKGARFYVTV 184
            Y NS Y   A+  + +
Sbjct: 300 EYKNSRYAPLAQMRLAI 316



 Score = 43.6 bits (102), Expect = 0.027,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 31/99 (31%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
             + RA   +    ++   + L I     +                +  TD      +Y 
Sbjct: 217 RTISRAFKNYPQTIFKKDLYLLEIIALGKLGIKKSLLIDIGTQWIKNYPTDPNIPEALYY 276

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
            A    +  N+ +A  Y+ +   ++  +  A  + +  A
Sbjct: 277 VAKALDENNNYKQAVRYYKRILLEYKNSRYAPLAQMRLA 315



 Score = 36.2 bits (83), Expect = 4.4,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 16/47 (34%)

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
           + NY    +  EA+  + +A        +A      I   Y    +A
Sbjct: 261 IKNYPTDPNIPEALYYVAKALDENNNYKQAVRYYKRILLEYKNSRYA 307


>gi|212634659|ref|YP_002311184.1| HPr serine phosphorylation site protein [Shewanella piezotolerans
           WP3]
 gi|212556143|gb|ACJ28597.1| HPr serine phosphorylation site protein [Shewanella piezotolerans
           WP3]
          Length = 240

 Score = 49.0 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 17/128 (13%), Positives = 45/128 (35%), Gaps = 14/128 (10%)

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           +  +   ++   ++  +  +   ++ +E Y +S Y   A +++                 
Sbjct: 121 ASYEQAVNLVLKEKKYEAAIPAFAQFIESYPDSSYAPNANYWLGQLL------------- 167

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
              + E+V A   F  V+  + D+    E++ +L           +A+     + + Y  
Sbjct: 168 -YNKSEFVGATKAFTTVVDKFKDSGKRGESLVKLGMISEKTGDKAKAKAYYQKVVKEYAN 226

Query: 260 GYWARYVE 267
              AR  +
Sbjct: 227 SAAARIAQ 234


>gi|146338274|ref|YP_001203322.1| hypothetical protein BRADO1178 [Bradyrhizobium sp. ORS278]
 gi|146191080|emb|CAL75085.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
          Length = 349

 Score = 49.0 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 32/133 (24%), Gaps = 22/133 (16%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
                        Y  A      +  +YP    +    Y +G S  +         +  +
Sbjct: 228 EYDLGIGYMQRRDYALAEQTMRNFTQKYPNDPMIGDAQYWLGESLYRR--------QQYR 279

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              +    +  ++  S     A   +      L  KE              AA   F  V
Sbjct: 280 DAAEIFLTVTTKHDKSSKAADALLRLGQSLAALKEKE--------------AACAAFGEV 325

Query: 217 LANYSDAEHAEEA 229
              Y  A    +A
Sbjct: 326 TRKYPRASAGVKA 338



 Score = 40.1 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 16/126 (12%), Positives = 46/126 (36%), Gaps = 14/126 (11%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           LD+    +  R+ Y+  + +++ ++++ A +     ++ +P   +   +        Y  
Sbjct: 216 LDTAPPRQTPRDEYDLGIGYMQRRDYALAEQTMRNFTQKYPNDPMIGDAQYWLGESLYRR 275

Query: 108 GKYQQAASLGEEYITQ---YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
            +Y+ A    E ++T    + +S         +G S A +        +  +        
Sbjct: 276 QQYRDA---AEIFLTVTTKHDKSSKAADALLRLGQSLAAL--------KEKEAACAAFGE 324

Query: 165 IVERYT 170
           +  +Y 
Sbjct: 325 VTRKYP 330



 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 47/127 (37%), Gaps = 22/127 (17%)

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
           Y +G+ Y Q         R   L  Q M    ++Y N P +  A++++            
Sbjct: 229 YDLGIGYMQR--------RDYALAEQTMRNFTQKYPNDPMIGDAQYWLGESL-------- 272

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
                  +R +Y  A   F  V   +  +  A +A+ RL ++  AL   + A      + 
Sbjct: 273 ------YRRQQYRDAAEIFLTVTTKHDKSSKAADALLRLGQSLAALKEKEAACAAFGEVT 326

Query: 255 ERYPQGY 261
            +YP+  
Sbjct: 327 RKYPRAS 333


>gi|300869588|ref|ZP_07114169.1| putative Serine/threonine protein kinase with TPR repeats
           [Oscillatoria sp. PCC 6506]
 gi|300332456|emb|CBN59369.1| putative Serine/threonine protein kinase with TPR repeats
           [Oscillatoria sp. PCC 6506]
          Length = 774

 Score = 49.0 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 35/180 (19%), Positives = 61/180 (33%), Gaps = 24/180 (13%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
           +  + G    ++  +Y          +E YE+AV   K+ + + A   + Q       + 
Sbjct: 361 LAGIAGALILAAIIIYFWQRQAPARAKEFYERAVQKAKQGDKAGAIADYTQAIGLN--SR 418

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
            A  +    A   Y  G YQQA     + I   P +      YY  G++Y         D
Sbjct: 419 DAE-AYYKRANTHYDLGAYQQAIQDYTQAIQVDPNNVK---AYYNRGLAY--------TD 466

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
               +  +Q  ++++    N      A       +  L   E+  G Y     +Y  AI 
Sbjct: 467 IEDRRSAVQDFTQVIRLNPN-----DAEA---YYQRALGYYEL--GDYKTAIEDYTQAIR 516



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 67/223 (30%), Gaps = 42/223 (18%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           D       + R     Y++A        + +A + + Q          A +    +    
Sbjct: 408 DYTQAIGLNSRDAEAYYKRANTHYDLGAYQQAIQDYTQ----------AIQVDPNNVKAY 457

Query: 105 YSAG----KYQQAASLGEEY---ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
           Y+ G      +   S  +++   I   P        YY   + Y ++           K 
Sbjct: 458 YNRGLAYTDIEDRRSAVQDFTQVIRLNPND---AEAYYQRALGYYEL--------GDYKT 506

Query: 158 MLQYMSRIVERYTNS--PYVKGARFYVTVGRNQLAAKEV--EI------GRYYLKRGEYV 207
            ++  ++ +    N    Y          G  Q A  +    I         Y  RG   
Sbjct: 507 AIEDYTQAIRLNPNDAKSYSNRGLARSAAGDKQGAMSDFTQAIELNPKQASVYYSRGRAR 566

Query: 208 AAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEA 246
             +  ++  + +YS A     +  +A      AY+ LA  D+A
Sbjct: 567 FNLADYKGAMEDYSQAIVLDPNQADAYTNRCSAYLNLATYDKA 609


>gi|209886400|ref|YP_002290257.1| TPR repeat protein [Oligotropha carboxidovorans OM5]
 gi|209874596|gb|ACI94392.1| TPR repeat protein [Oligotropha carboxidovorans OM5]
          Length = 339

 Score = 49.0 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 34/133 (25%), Gaps = 22/133 (16%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           + K              Y  A      + T+YP  + V    Y +G S  Q         
Sbjct: 214 SPKDEFDLGIGYMQRKDYALAEETMRNFTTKYPSDRLVGDAQYWLGESLYQR-------- 265

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           +  +   +    +  +Y  S     A   +      L  K+              AA   
Sbjct: 266 KQYREAAEAFLAVTSKYDKSAKAPDALLRLGESLAALKEKD--------------AACAA 311

Query: 213 FQLVLANYSDAEH 225
           F  V   Y  A  
Sbjct: 312 FGEVARKYPRASS 324



 Score = 42.4 bits (99), Expect = 0.076,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 14/110 (12%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           ++   L  + M     +Y +   V  A++++                   +R +Y  A  
Sbjct: 228 RKDYALAEETMRNFTTKYPSDRLVGDAQYWLGESL--------------YQRKQYREAAE 273

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            F  V + Y  +  A +A+ RL E+  AL   D A      +  +YP+  
Sbjct: 274 AFLAVTSKYDKSAKAPDALLRLGESLAALKEKDAACAAFGEVARKYPRAS 323



 Score = 39.3 bits (91), Expect = 0.63,   Method: Composition-based stats.
 Identities = 13/123 (10%), Positives = 41/123 (33%), Gaps = 14/123 (11%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
               +  ++ ++  + +++ ++++ A E     +  +P   +   +        Y   +Y
Sbjct: 209 APPTQSPKDEFDLGIGYMQRKDYALAEETMRNFTTKYPSDRLVGDAQYWLGESLYQRKQY 268

Query: 111 QQAASLGEEYITQ---YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           ++A    E ++     Y +S         +G S A +        +           +  
Sbjct: 269 REA---AEAFLAVTSKYDKSAKAPDALLRLGESLAAL--------KEKDAACAAFGEVAR 317

Query: 168 RYT 170
           +Y 
Sbjct: 318 KYP 320


>gi|156325726|ref|XP_001618580.1| hypothetical protein NEMVEDRAFT_v1g224994 [Nematostella vectensis]
 gi|156199412|gb|EDO26480.1| predicted protein [Nematostella vectensis]
          Length = 267

 Score = 48.6 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 52/140 (37%), Gaps = 22/140 (15%)

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
               E+++  YP S+  D  YY +G +Y     +           +    +++  +++S 
Sbjct: 36  IEDLEKFVKTYPSSQYTDDAYYELGNTYVNENNET--------KAVATYDKLIANHSSSS 87

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
           YV  A     +               Y    +   A+ +F+ V A +  +  + EA+A  
Sbjct: 88  YVAKAILKQGLI--------------YYNNNKTEPALVKFKKVAAEFPGSSESLEAVATA 133

Query: 234 VEAYVALALMDEAREVVSLI 253
              YV    ++E  + V  +
Sbjct: 134 RLIYVDNGKVEEYSDWVKTL 153



 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 53/191 (27%), Gaps = 33/191 (17%)

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            E   +  + +P +     +         +     +A +  ++ I  +  S  V      
Sbjct: 36  IEDLEKFVKTYPSSQYTDDAYYELGNTYVNENNETKAVATYDKLIANHSSSSYVAKAILK 95

Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA--RFYVTVGRN------- 187
            G+ Y    +        T+  L    ++   +  S     A     +    N       
Sbjct: 96  QGLIYYNNNK--------TEPALVKFKKVAAEFPGSSESLEAVATARLIYVDNGKVEEYS 147

Query: 188 ----QLAAKEVEIGRY-----------YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
                L+  EV                YL       AI  F   +A + +  HA +A   
Sbjct: 148 DWVKTLSFIEVSNADLDNTTYESAEKQYLMNNA-KQAISGFSGYIAKFPNGLHALKANFY 206

Query: 233 LVEAYVALALM 243
           L + Y A  L 
Sbjct: 207 LAQLYFADKLE 217



 Score = 41.6 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 68/216 (31%), Gaps = 52/216 (24%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
            +        YE    ++ E N +KA   +++   +   +    K++L    + Y+  K 
Sbjct: 47  PSSQYTDDAYYELGNTYVNENNETKAVATYDKLIANHSSSSYVAKAILKQGLIYYNNNKT 106

Query: 111 QQAASLGEEYITQYPES---------------------KNVDYVYYLVGMSYAQMIRDVP 149
           + A    ++   ++P S                     +  D+V     +S+ + + +  
Sbjct: 107 EPALVKFKKVAAEFPGSSESLEAVATARLIYVDNGKVEEYSDWV---KTLSFIE-VSNAD 162

Query: 150 YDQR------------ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
            D                K  +   S  + ++ N  +   A                 + 
Sbjct: 163 LDNTTYESAEKQYLMNNAKQAISGFSGYIAKFPNGLHALKAN--------------FYLA 208

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
           + Y        ++  +  V+   S  E  E+A+ARL
Sbjct: 209 QLYFADKLESNSVKHYDYVVNQ-SRNEFTEQALARL 243


>gi|149369571|ref|ZP_01889423.1| hypothetical protein SCB49_07087 [unidentified eubacterium SCB49]
 gi|149356998|gb|EDM45553.1| hypothetical protein SCB49_07087 [unidentified eubacterium SCB49]
          Length = 593

 Score = 48.6 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 46/123 (37%), Gaps = 8/123 (6%)

Query: 67  FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
            L+ ++ ++A         +     +  ++LL  A +    G Y +A    ++ I  + E
Sbjct: 477 ALQNKD-AEAITQLEDIITNHKGESIEDEALLRQANLYKKTGDYLKAELNYKKLIELFNE 535

Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
               D  ++L+   Y        +D    +   +   +I+  Y +S +   AR    + R
Sbjct: 536 DILADDAHFLLAKMY-------EFDLAQPEKAKELYEQIIFNYADSIFFTEARLRFRMLR 588

Query: 187 NQL 189
             L
Sbjct: 589 GDL 591


>gi|39934199|ref|NP_946475.1| hypothetical protein RPA1124 [Rhodopseudomonas palustris CGA009]
 gi|39648047|emb|CAE26567.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
          Length = 345

 Score = 48.6 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 13/97 (13%), Positives = 27/97 (27%), Gaps = 8/97 (8%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
                        Y  A      +  +YP++       Y +G S+ Q         +  +
Sbjct: 224 EFDLGIGYMQRRDYALAEETMRNFAQKYPDNPLTADAQYWLGESFFQR--------QMYR 275

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
              +    +  ++  S     A   +    + L  KE
Sbjct: 276 DAAEAFLAVTSKHEKSGKAPDALLRLGQSLSALKEKE 312



 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 45/110 (40%), Gaps = 14/110 (12%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           +R   L  + M    ++Y ++P    A++++              G  + +R  Y  A  
Sbjct: 234 RRDYALAEETMRNFAQKYPDNPLTADAQYWL--------------GESFFQRQMYRDAAE 279

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            F  V + +  +  A +A+ RL ++  AL   + A   +  I  +YPQ  
Sbjct: 280 AFLAVTSKHEKSGKAPDALLRLGQSLSALKEKEAACAALGEIGRKYPQAS 329



 Score = 35.9 bits (82), Expect = 6.7,   Method: Composition-based stats.
 Identities = 15/134 (11%), Positives = 45/134 (33%), Gaps = 15/134 (11%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
              +  R+ ++  + +++ ++++ A E     ++ +P   +   +        +    Y+
Sbjct: 216 PPSQTPRDEFDLGIGYMQRRDYALAEETMRNFAQKYPDNPLTADAQYWLGESFFQRQMYR 275

Query: 112 QAASLGEEYITQYPESK---NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
            A    E ++    + +           +G S + +        +  +     +  I  +
Sbjct: 276 DA---AEAFLAVTSKHEKSGKAPDALLRLGQSLSAL--------KEKEAACAALGEIGRK 324

Query: 169 YTN-SPYVKGARFY 181
           Y   S  VK A   
Sbjct: 325 YPQASSSVKKAVDR 338


>gi|325474670|gb|EGC77856.1| cyclic nucleotide-binding protein [Treponema denticola F0402]
          Length = 333

 Score = 48.6 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 36/86 (41%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y KA    ++  F  AY+ ++          +   + + +    +S  +Y +   L   +
Sbjct: 211 YNKAEDLFEKGEFEAAYDQYHAVIEAGAGDEITDNAYIGAGKSLHSQKEYVRCLQLLTGF 270

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIR 146
           I+Q+P+S  +      +GM Y  M R
Sbjct: 271 ISQHPKSSKIGDALMYLGMCYMDMER 296


>gi|291288224|ref|YP_003505040.1| Tetratricopeptide TPR_2 repeat protein [Denitrovibrio acetiphilus
           DSM 12809]
 gi|290885384|gb|ADD69084.1| Tetratricopeptide TPR_2 repeat protein [Denitrovibrio acetiphilus
           DSM 12809]
          Length = 858

 Score = 48.6 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 36/94 (38%), Gaps = 8/94 (8%)

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQY-PESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
            +  L +    Y    ++ AA+  E++  QY P  +      Y +G +Y +M       Q
Sbjct: 765 EEVYLDTGISYYKRNNFENAATALEKFKLQYSPRDEKRAEGLYYLGKTYRKM-------Q 817

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
              +  +  +  ++E    S Y   AR  +   +
Sbjct: 818 GKDEQAVNALMELLESVPGSVYASAARSELEEIK 851



 Score = 42.8 bits (100), Expect = 0.057,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 39/101 (38%), Gaps = 6/101 (5%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           + L+     +   KY+ A    E +I +   S ++  VY +         +D  Y +   
Sbjct: 424 AELVLIKAFFKQNKYEDADKRVENFIRKNFTSDHLPEVYDIRQQITLTKAKDA-YSKSNY 482

Query: 156 KLMLQYMSRIVERYTNSPYVKGARF-----YVTVGRNQLAA 191
            L  Q +  ++E + ++ + + A            R++ AA
Sbjct: 483 ALAQQLIEGMLEVFPDTKHKREALEILQDIRFGDIRDRFAA 523



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 48/149 (32%), Gaps = 33/149 (22%)

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA--- 190
            + +GM Y +M               +     +++Y +S   K         +  LA   
Sbjct: 163 LFRMGMIYFKMGEQSD---DNYIFAARIFDDFLKQYPDSFRKKDVLIKTAEAKE-LAMLY 218

Query: 191 ----------------------AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
                                 + E  I   Y K G+YV AI   + V+ N+ +    + 
Sbjct: 219 SEAVFSYNNIIKSLRDRDIRKMSYE-RIAEIYSKSGQYVQAIDAHENVIYNFPETFTIQT 277

Query: 229 AMARLVEAYVALALMDEA-REVVSLIQER 256
           A   ++ A       D A +  ++++  +
Sbjct: 278 AKIGMLHAKRK--DFDLAYKTFLTVLDHK 304


>gi|224437345|ref|ZP_03658317.1| paralysed flagella protein PflA [Helicobacter cinaedi CCUG 18818]
          Length = 781

 Score = 48.6 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 54/160 (33%), Gaps = 16/160 (10%)

Query: 44  RDVYLDSVT---DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
           +D+ +D      D     E Y      +   N  +A +  ++    +P     +  LL  
Sbjct: 158 KDLDIDRGPLHYDEGEDFEAYNHIKTLINNHNHIEAVKAIDETLIAYPQTIFTKDLLLYR 217

Query: 101 AFV--QYSA-GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
                 + +         +G ++I +YP   NV  V Y +G +YA        D +    
Sbjct: 218 LRALEHFDSVENSDMIVDMGIKWIKKYPTDSNVPEVLYYLGNAYA--------DMKIPNE 269

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
              Y  R +  Y  S Y+      + + +N     +  + 
Sbjct: 270 AKYYFERTISEYPESRYMP--LSKMALAKNFNTGSDSSVA 307



 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 18/46 (39%)

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           +  Y    +  E +  L  AY  + + +EA+         YP+  +
Sbjct: 241 IKKYPTDSNVPEVLYYLGNAYADMKIPNEAKYYFERTISEYPESRY 286


>gi|67921401|ref|ZP_00514919.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
 gi|67856513|gb|EAM51754.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
          Length = 306

 Score = 48.6 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 15/120 (12%), Positives = 37/120 (30%), Gaps = 13/120 (10%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFA-GVARKSLLMSAFVQYSAGKYQQAAS 115
           R  Y + ++  +  N+ +A   ++     D  ++           A        + +A +
Sbjct: 138 RAYYNQGLVHFQLGNYQQALNSYDQALEIDQDYSLEHKTLIYHDRALAHLKLEDFSRAIA 197

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
                +   P+++     YY  G +Y +            K   Q  + ++     S   
Sbjct: 198 NLTHLLILNPKNEQ---AYYQRGYAYQKS--------GDHKAAFQDFTEVITLNPQSTNA 246


>gi|328542546|ref|YP_004302655.1| Tol-pal system protein YbgF [polymorphum gilvum SL003B-26A1]
 gi|326412292|gb|ADZ69355.1| Tol-pal system protein YbgF, putative [Polymorphum gilvum
           SL003B-26A1]
          Length = 323

 Score = 48.6 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 33/126 (26%), Gaps = 22/126 (17%)

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
             A+     G Y QA      +I  YP  + V    Y +G S           Q   +  
Sbjct: 203 DRAYSFALNGDYAQAEQAFRIFIDTYPNDRLVSNAQYWLGESLLA--------QGEYRAA 254

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
                +    Y        +   + +  N L   +              AA   +  +L 
Sbjct: 255 ADAFLKTYTDYPGDQKAPDSLLKLGLSLNGLGQTD--------------AACATYSELLT 300

Query: 219 NYSDAE 224
            +  A 
Sbjct: 301 KFPGAP 306



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 38/103 (36%), Gaps = 14/103 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              Q     ++ Y N   V  A++++    + LA             GEY AA   F   
Sbjct: 216 QAEQAFRIFIDTYPNDRLVSNAQYWLGE--SLLAQ------------GEYRAAADAFLKT 261

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
             +Y   + A +++ +L  +   L   D A    S +  ++P 
Sbjct: 262 YTDYPGDQKAPDSLLKLGLSLNGLGQTDAACATYSELLTKFPG 304



 Score = 42.8 bits (100), Expect = 0.052,   Method: Composition-based stats.
 Identities = 19/166 (11%), Positives = 48/166 (28%), Gaps = 14/166 (8%)

Query: 13  EAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN 72
                 L +    +          G          + S+      R  Y++A  F    +
Sbjct: 154 PLDLSALARGQAVVSPPATGTAPPGVSVGDPIGGQIASLDVTGDARTDYDRAYSFALNGD 213

Query: 73  FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ---YPESKN 129
           +++A + F      +P   +   +         + G+Y    +  + ++     YP  + 
Sbjct: 214 YAQAEQAFRIFIDTYPNDRLVSNAQYWLGESLLAQGEY---RAAADAFLKTYTDYPGDQK 270

Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
                  +G+S   +          T       S ++ ++  +P  
Sbjct: 271 APDSLLKLGLSLNGL--------GQTDAACATYSELLTKFPGAPKA 308


>gi|159112445|ref|XP_001706451.1| Protein F54C1.5 [Giardia lamblia ATCC 50803]
 gi|157434548|gb|EDO78777.1| Protein F54C1.5 [Giardia lamblia ATCC 50803]
          Length = 688

 Score = 48.6 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 8/77 (10%)

Query: 68  LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
           +++Q + +A E         P    A  SLL  AF  YSAG Y+ A SL +E   ++P S
Sbjct: 33  IRDQEWDQAIEILKDQLAQHPGNR-AALSLL--AFCNYSAGNYEDAVSLYQELCQRHPTS 89

Query: 128 KNVDYVYYLVGMSYAQM 144
           +      Y + ++ A++
Sbjct: 90  ER-----YQLALANARL 101


>gi|91200098|emb|CAJ73141.1| conserved hypothetical protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 344

 Score = 48.6 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 44/226 (19%), Positives = 72/226 (31%), Gaps = 38/226 (16%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           GW  +S+    L    D   +      A+ + K    ++A   F +     P    A K+
Sbjct: 121 GWINESTEAFSLAVSLDPTMKEAFRMLALSYTKSGKANEAIANFKKVIELDP--RDA-KA 177

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
           LL    + Y       A +  E+Y++    + N   VYY +G  Y +  R          
Sbjct: 178 LLELGTLYYKNRMADDAIATFEKYVSLDQGNAN---VYYNMGCIYGEKNR--------FD 226

Query: 157 LMLQYMSRIVERYTNS--PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
             ++     +    N    Y                     IG  Y     +  AI  F+
Sbjct: 227 KAVKAYLMALTINPNHVPTY-------------------YNIGVAYNMMERFDEAIEAFK 267

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            VL    +     +A+  L  AY    L  E+ E+   + E  P  
Sbjct: 268 KVLNLDPE---NHDALYNLGFAYNKSGLYGESLEICKRLTELNPAN 310


>gi|158521774|ref|YP_001529644.1| ABC-type branched-chain amino acid transport systems periplasmic
           component-like protein [Desulfococcus oleovorans Hxd3]
 gi|158510600|gb|ABW67567.1| ABC-type branched-chain amino acid transport systems periplasmic
           component-like protein [Desulfococcus oleovorans Hxd3]
          Length = 677

 Score = 48.6 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 32/81 (39%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
                 +++ +A      Q++++A   +     +FP       + L  A ++    ++ +
Sbjct: 33  GPSPGDQLFARAEAAFSRQDYNEALTLYQAYLTEFPGGSHEPDARLRKADIRSRQNRFAE 92

Query: 113 AASLGEEYITQYPESKNVDYV 133
           +    E  I++YP S+     
Sbjct: 93  SRDGYESVISRYPASRYEAMA 113



 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 50/160 (31%), Gaps = 42/160 (26%)

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           A   +S   Y +A +L + Y+T++P   +                 D+   Q        
Sbjct: 44  AEAAFSRQDYNEALTLYQAYLTEFPGGSHEPDARLRKA--------DIRSRQNRFAESRD 95

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI---PRFQL-- 215
               ++ RY  S Y   A   +                 +L++  +   I    R     
Sbjct: 96  GYESVISRYPASRYEAMAVIGILES--------------WLRQKAFSTVIEQSGRLDDRT 141

Query: 216 -----VLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
                ++  Y          A + EAY+++    +A +++
Sbjct: 142 APEPIIVRKY----------ALVGEAYLSMGRPMDAAQIL 171


>gi|87310268|ref|ZP_01092399.1| hypothetical protein DSM3645_27608 [Blastopirellula marina DSM
           3645]
 gi|87287017|gb|EAQ78920.1| hypothetical protein DSM3645_27608 [Blastopirellula marina DSM
           3645]
          Length = 428

 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 65/175 (37%), Gaps = 29/175 (16%)

Query: 103 VQYSAGKYQQAASLGEEYITQY---PESK--NVDYVYYLVGMSYAQM--IRDVPYDQRAT 155
             +   +Y +A +  ++ I  Y   P S   ++ +  Y  G  + ++   R    D RA+
Sbjct: 253 CHFELKEYAKAIADFDDAIKSYQSLPNSPPSSIAFALYQRGTCHFELGDYRSAIRDARAS 312

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFY------VTVGRNQLAA--KEVEIGRYYLKRGEYV 207
              L+  +  + +Y     +  A         V+   ++ A    + +   Y  +RG+Y 
Sbjct: 313 -QCLETKNLSIFQYP---LIYQAMLRQGDIKLVSEIIDKPADMVSDPQTALY--ERGKYF 366

Query: 208 AAIPRFQLVLANY-----SDA-EHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
               RF     ++      D+  HA E    LV  Y      D A +   L+ E+
Sbjct: 367 LESDRFAEAEKDFLALATPDSGSHAPE--QYLVTIYQKQGKADLAEKYAKLVAEK 419


>gi|302338568|ref|YP_003803774.1| hypotheticalprotein [Spirochaeta smaragdinae DSM 11293]
 gi|301635753|gb|ADK81180.1| TPR repeat-containing protein [Spirochaeta smaragdinae DSM 11293]
          Length = 227

 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/123 (13%), Positives = 47/123 (38%), Gaps = 9/123 (7%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
             L  ++  +  A + F + ++++P + +A  +L+  A     AG  ++A  + ++    
Sbjct: 110 GNLAFEKSQWDDAQKDFAELAKEYPKSYLAPVALMNQATALEEAGNNKEAVEIYQKVFDT 169

Query: 124 YP-ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
           Y   S +     + +   Y    +         +  L     + + + +S + K +R  +
Sbjct: 170 YKETSPDAPRALFSIARLYETTGQK--------EAALDAYREVADSFPDSDWTKLSRDRI 221

Query: 183 TVG 185
              
Sbjct: 222 IYL 224



 Score = 42.4 bits (99), Expect = 0.072,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 34/109 (31%), Gaps = 15/109 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              +  + + + Y  S     A        NQ  A E        + G    A+  +Q V
Sbjct: 121 DAQKDFAELAKEYPKSYLAPVA------LMNQATALE--------EAGNNKEAVEIYQKV 166

Query: 217 LANYSDA-EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
              Y +    A  A+  +   Y      + A +    + + +P   W +
Sbjct: 167 FDTYKETSPDAPRALFSIARLYETTGQKEAALDAYREVADSFPDSDWTK 215



 Score = 35.5 bits (81), Expect = 8.9,   Method: Composition-based stats.
 Identities = 12/84 (14%), Positives = 31/84 (36%), Gaps = 1/84 (1%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF-PFAGVARKSLLMSAFV 103
           ++  +          +  +A    +  N  +A E + +    +   +  A ++L   A +
Sbjct: 128 ELAKEYPKSYLAPVALMNQATALEEAGNNKEAVEIYQKVFDTYKETSPDAPRALFSIARL 187

Query: 104 QYSAGKYQQAASLGEEYITQYPES 127
             + G+ + A     E    +P+S
Sbjct: 188 YETTGQKEAALDAYREVADSFPDS 211


>gi|294664115|ref|ZP_06729508.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292606115|gb|EFF49373.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 609

 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 38/111 (34%), Gaps = 9/111 (8%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           ++    +      C L   +  ++ D  L    D   Q+ + +  V   ++ +F+ A + 
Sbjct: 324 FRRRAVVAVLATACVLPLAQPANAADGTLWQRADQVQQQRL-DAGVQAYRKGDFAAAQKA 382

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           F              + L          G+Y  A +  +  + Q+P  ++ 
Sbjct: 383 FEAVP--------TDEGLYNLGNALARQGQYDAAIAAYDRALKQHPNQQDA 425


>gi|117618152|ref|YP_858092.1| TPR domain-containing protein [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117559559|gb|ABK36507.1| TPR domain protein [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
          Length = 270

 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 40/124 (32%), Gaps = 22/124 (17%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               Y +A    E +I QYP S  V   +Y +G                        + +
Sbjct: 162 KEKNYDKAIPAFEGFIKQYPSSSYVPNAHYWLGQLLFNKGDRTG--------AAAQFTTV 213

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
             +++ SP    A   + +   QL  K+ E   +Y             + V+  Y +   
Sbjct: 214 ATKFSKSPKRADALLKLGML-AQLDGKKAEAKNFY-------------EQVIKGYPNTSP 259

Query: 226 AEEA 229
           A+ A
Sbjct: 260 AQLA 263



 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 50/130 (38%), Gaps = 9/130 (6%)

Query: 57  QREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           + + Y+ AV   LKE+N+ KA   F    + +P +     +      + ++ G    AA+
Sbjct: 149 ENQAYDAAVNMVLKEKNYDKAIPAFEGFIKQYPSSSYVPNAHYWLGQLLFNKGDRTGAAA 208

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
                 T++ +S         +GM           D +       +  ++++ Y N+   
Sbjct: 209 QFTTVATKFSKSPKRADALLKLGM-------LAQLDGKKA-EAKNFYEQVIKGYPNTSPA 260

Query: 176 KGARFYVTVG 185
           + A+  ++  
Sbjct: 261 QLAKQSLSKL 270


>gi|254447964|ref|ZP_05061428.1| tetratricopeptide repeat domain protein [gamma proteobacterium
           HTCC5015]
 gi|198262390|gb|EDY86671.1| tetratricopeptide repeat domain protein [gamma proteobacterium
           HTCC5015]
          Length = 197

 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/151 (12%), Positives = 42/151 (27%), Gaps = 16/151 (10%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            I    +V  L       S    +D         + Y  A+  L+ +++ +A     + +
Sbjct: 11  LIALLASVSILASCGGSDSVKARVD--HQSMTPDQAYVYALEMLQAEDYEQALPLLQRAN 68

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
                   A   +      Q   G+Y++A    +  +   P + ++              
Sbjct: 69  EK--VGRSAE-VIANLGVAQAELGEYEKALENLKRALGMSPGNLDI-----------VNQ 114

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
           I      Q       Q   + +  +  S   
Sbjct: 115 IAVTYRMQGEFDKAKQLYEKQIATHPQSARA 145


>gi|66810924|ref|XP_639169.1| hypothetical protein DDB_G0283157 [Dictyostelium discoideum AX4]
 gi|60467802|gb|EAL65817.1| hypothetical protein DDB_G0283157 [Dictyostelium discoideum AX4]
          Length = 514

 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 51/159 (32%), Gaps = 28/159 (17%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG-VARKSL 97
           + + +    L     ++   E    A     EQ +  A E + +  +  P A   + +S 
Sbjct: 34  DDKETDPSTLSKEECIKKSDEYKAIANKHFSEQKYDLAAEVYTKAIKYHPTAILYSNRS- 92

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD--Y--VYYLVGMSYAQMIRDVPYDQR 153
               F  +    Y  A    +        S  +D  Y   YY +G ++  +        R
Sbjct: 93  ----FSNFKNELYVNALQDAQ-------TSHEMDPTYIKAYYRLGSAHLAL--------R 133

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
             +    +   ++ +         A+  + +  N + AK
Sbjct: 134 NFEEAKHFFKELLTKNPK---ENDAKIKLNLCNNLIKAK 169


>gi|116748479|ref|YP_845166.1| extracellular ligand-binding receptor [Syntrophobacter fumaroxidans
           MPOB]
 gi|116697543|gb|ABK16731.1| Extracellular ligand-binding receptor [Syntrophobacter fumaroxidans
           MPOB]
          Length = 643

 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 41/116 (35%), Gaps = 5/116 (4%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDS-----VTDVRYQREVYEKAVLFLKE 70
             ++ +++  +   + V FL G            S      T      ++ ++A    K 
Sbjct: 1   MKRISRYSRILLLVVTVAFLAGCPGSQQPAEQAPSRPSLTGTTPPDAEKMVQQAEQARKS 60

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
            N  KA   + +  + +P   VA +   +   +  + G+  +A    +  +  YP 
Sbjct: 61  GNIPKAISLWEKVIQKYPGHAVAARGFSVVGNLYLAQGQPDRALQYFDYLLYTYPN 116


>gi|269302452|gb|ACZ32552.1| tetratricopeptide repeat protein [Chlamydophila pneumoniae LPCoLN]
          Length = 318

 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 53/150 (35%)

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
             A   +++    FP   +  ++L   A +        +A    ++   Q+P        
Sbjct: 151 EDALRIYDEILTAFPSKDLGAQALYSKAALLIVKNDLTEAIKTLKKLTLQFPLHILSSEA 210

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
           +  +   Y Q  +  P++ +           + +++ N P  +     V   R   A   
Sbjct: 211 FVRLSEIYLQQAKKEPHNLQYLHFAKLNEEAMKKQHPNHPLNEVVSANVGAMREHYARGL 270

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
              GR+Y K+ +  AA   ++  + NY D 
Sbjct: 271 YATGRFYEKKKKAEAANIYYRTAITNYPDT 300



 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 72/228 (31%), Gaps = 45/228 (19%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
              E + +   FLK+ NF KA   F   +  FP   +  ++  +     +       A  
Sbjct: 42  SAEEYFSQGQEFLKKGNFRKALLCFGIITHHFPKDILRNQAQYLIGVCYFKQDHPDLADK 101

Query: 116 LGEEYITQYPESKNVDY------VYYLVGMSYAQ-------MIRDVPYDQRATKLMLQYM 162
               Y+       + +Y      + Y +   +AQ        +   P    A +  L+  
Sbjct: 102 AFASYLQL----PDAEYSEELFQMKYAIAQRFAQGKRKRICRLEGFPKLMNADEDALRIY 157

Query: 163 SRIVERYTNSPYVKGA---RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
             I+  + +      A   +  + + +N L                   AI   + +   
Sbjct: 158 DEILTAFPSKDLGAQALYSKAALLIVKNDLTE-----------------AIKTLKKLTLQ 200

Query: 220 YSDAEHAEEAMARLVEAYVA--------LALMDEAREVVSLIQERYPQ 259
           +     + EA  RL E Y+         L  +  A+     +++++P 
Sbjct: 201 FPLHILSSEAFVRLSEIYLQQAKKEPHNLQYLHFAKLNEEAMKKQHPN 248


>gi|283852861|ref|ZP_06370123.1| tol-pal system protein YbgF [Desulfovibrio sp. FW1012B]
 gi|283571771|gb|EFC19769.1| tol-pal system protein YbgF [Desulfovibrio sp. FW1012B]
          Length = 403

 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 42/132 (31%), Gaps = 8/132 (6%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
              ++  Y +A+      N + A   F+Q     P + +   +L       ++ G YQ A
Sbjct: 278 SPAEKAEYNRALQMAINGNTAGAKAAFDQFLAAHPRSPLTPNALYWVGEGAFAGGDYQTA 337

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
            S  ++    +P         Y + M+  +                  + R ++ Y ++ 
Sbjct: 338 ISDFDKVAKGWPGHHKAADALYKMAMAQEKA--------GDAAAARASLERYLKDYPSAE 389

Query: 174 YVKGARFYVTVG 185
                R  +   
Sbjct: 390 LAGIVRQKLQAL 401



 Score = 43.2 bits (101), Expect = 0.036,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 28/78 (35%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                    +Y          ++  A   F++ ++ +P    A  +L   A  Q  AG  
Sbjct: 312 PRSPLTPNALYWVGEGAFAGGDYQTAISDFDKVAKGWPGHHKAADALYKMAMAQEKAGDA 371

Query: 111 QQAASLGEEYITQYPESK 128
             A +  E Y+  YP ++
Sbjct: 372 AAARASLERYLKDYPSAE 389


>gi|167950636|ref|ZP_02537710.1| hypothetical protein Epers_31176 [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 191

 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/85 (12%), Positives = 27/85 (31%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
                +   S +    +  D + +   Y++A   LK+  +  + + F    + FP     
Sbjct: 83  AATSADAAQSGEAGAQTPPDPKLEAAAYQRAFNLLKQGRYPDSIKAFRDFLQQFPGGSYG 142

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGE 118
             +        Y +  +  A    +
Sbjct: 143 DNAQYWLGEASYVSRDFDAAIERVQ 167


>gi|222053775|ref|YP_002536137.1| hypothetical protein [Geobacter sp. FRC-32]
 gi|221563064|gb|ACM19036.1| TPR repeat-containing protein [Geobacter sp. FRC-32]
          Length = 391

 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 47/241 (19%), Positives = 84/241 (34%), Gaps = 47/241 (19%)

Query: 39  ERQSSRDVYLDSVTDVRYQREV---Y--EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
           +  S+ D    +  D++ QR++   Y    A+  L++  + +A     +     P +  A
Sbjct: 2   DSMSNADKLFAAFGDIQSQRQLTANYAMNGALQALQDGKYDRAASQLKRVLALTPDSTNA 61

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV--DYVYYLVGMSYAQMIRDVPYD 151
            K L M        GK   A +  +  +   P S +   D     +G +Y +  R     
Sbjct: 62  YKYLGM---AYSGMGKSNDAIAAYKNAVRLEPGSSSAHKD-----LGNAYLEAKRYP--- 110

Query: 152 QRATKLMLQYMSRIVERYTNSPYVK----------------GARFYVTVGRNQLAAKEVE 195
                   +         + S Y                   A+F   +  ++  A    
Sbjct: 111 -----EAEKEFQATARIDSTSTYAPYTLGFLYLNTGREQEAEAQFKKVIAIDRRDAHGYY 165

Query: 196 -IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR--LVEAYVALALMDEAREVVSL 252
            +G  Y K G+Y  AI + Q+ +    D      A+A   L +AY A    D+A+E V  
Sbjct: 166 GLGMAYSKMGKYDEAIEQLQMAVKIDKDF-----ALAHSELGKAYAATTQKDKAQEEVET 220

Query: 253 I 253
           +
Sbjct: 221 L 221


>gi|73670356|ref|YP_306371.1| O-linked N-acetylglucosamine transferase [Methanosarcina barkeri
           str. Fusaro]
 gi|72397518|gb|AAZ71791.1| O-linked N-acetylglucosamine transferase [Methanosarcina barkeri
           str. Fusaro]
          Length = 397

 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 62/201 (30%), Gaps = 35/201 (17%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
            Y    Y KA+   +  ++  A E + +   +   +     + +         GKY +A 
Sbjct: 150 DYPNAWYGKALNLSQAGDYKAAIEAYEKVLEEN--SDYKE-AWVGKGIALGQMGKYDEAI 206

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
              ++ I       N    ++  G+    +         + +  L+   + VE    +  
Sbjct: 207 IAYDKAIEL---DPNFAEAWHYKGVDMDSL--------GSYRQALKAYQKTVELDPEN-- 253

Query: 175 VKGARFYVTVGRNQLAAKEVEI-------------GRYYLKRGEYVAAIPRFQLVLANYS 221
              A   + +    L   +  I                +  +G  ++ + RF+     Y 
Sbjct: 254 -DDAWNNMGIDLENLEKYDEAIKAFDKAIEINSENADVWYNKGFTLSQMQRFEEAAETYR 312

Query: 222 D-AEHAEEAMARLVEAYVALA 241
              +   E +    EAY +L 
Sbjct: 313 KATQLDPEYL----EAYSSLG 329


>gi|260554250|ref|ZP_05826503.1| conserved hypothetical protein [Acinetobacter sp. RUH2624]
 gi|260404630|gb|EEW98147.1| conserved hypothetical protein [Acinetobacter sp. RUH2624]
          Length = 294

 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 44/120 (36%), Gaps = 17/120 (14%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG--EYVAA 209
           Q   K  +  M   ++ + NS Y   A F++                ++L      Y  A
Sbjct: 189 QGGAKKAIAPMQNFIKNHPNSIYTGNAYFWL--------------AEFHLATDPVNYNEA 234

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVE-AYVALALMDEAREVVSLIQERYPQGYWARYVET 268
              + +V + Y ++  A  A+ +L   A         A +  + +  +YP+   A++ + 
Sbjct: 235 KKNYNIVASQYPNSSKAPRALYQLYSIAKDVDKNTVSANQYKNKLLTQYPKSEEAKFFKK 294



 Score = 45.5 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 42/122 (34%), Gaps = 9/122 (7%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG--KYQQAA 114
           ++  Y  A+   K+    KA        ++ P +     +    A    +     Y +A 
Sbjct: 176 EKAAYTVALDAYKQGGAKKAIAPMQNFIKNHPNSIYTGNAYFWLAEFHLATDPVNYNEAK 235

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
                  +QYP S       Y +      + +DV    + T    QY ++++ +Y  S  
Sbjct: 236 KNYNIVASQYPNSSKAPRALYQL----YSIAKDVD---KNTVSANQYKNKLLTQYPKSEE 288

Query: 175 VK 176
            K
Sbjct: 289 AK 290



 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 28/79 (35%), Gaps = 8/79 (10%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR-DVPYDQRATKLMLQYMS 163
           Y  G  ++A +  + +I  +P S          G +Y  +    +  D        +  +
Sbjct: 187 YKQGGAKKAIAPMQNFIKNHPNSIYT-------GNAYFWLAEFHLATDPVNYNEAKKNYN 239

Query: 164 RIVERYTNSPYVKGARFYV 182
            +  +Y NS     A + +
Sbjct: 240 IVASQYPNSSKAPRALYQL 258


>gi|217969211|ref|YP_002354445.1| tol-pal system protein YbgF [Thauera sp. MZ1T]
 gi|217506538|gb|ACK53549.1| tol-pal system protein YbgF [Thauera sp. MZ1T]
          Length = 265

 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 40/122 (32%), Gaps = 8/122 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A+  LK      A   F +    +P       +   +      A     A    +  
Sbjct: 149 YQGALALLKNGKHKDAQTAFERFITRYPAGNFTAGAHFWAGNAALQARDVASANRHFKTV 208

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           + +YP+         ++G++ +Q                + +  +VERY  S   + AR 
Sbjct: 209 MDKYPKENVAPDA--MLGLANSQQA------MNDAAGAKRTLQSLVERYPQSNAAQVARQ 260

Query: 181 YV 182
            +
Sbjct: 261 RL 262



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 39/107 (36%), Gaps = 16/107 (14%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR-FQ 214
           K       R + RY    +   A  +   G   L A++             VA+  R F+
Sbjct: 162 KDAQTAFERFITRYPAGNFT--AGAHFWAGNAALQARD-------------VASANRHFK 206

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            V+  Y     A +AM  L  +  A+     A+  +  + ERYPQ  
Sbjct: 207 TVMDKYPKENVAPDAMLGLANSQQAMNDAAGAKRTLQSLVERYPQSN 253



 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 46/134 (34%), Gaps = 24/134 (17%)

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           A      GK++ A +  E +IT+YP        ++  G +  Q         R      +
Sbjct: 152 ALALLKNGKHKDAQTAFERFITRYPAGNFTAGAHFWAGNAALQA--------RDVASANR 203

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR-FQLVLAN 219
           +   ++++Y        A   + +  +Q A  +              A   R  Q ++  
Sbjct: 204 HFKTVMDKYPKENVAPDA--MLGLANSQQAMND-------------AAGAKRTLQSLVER 248

Query: 220 YSDAEHAEEAMARL 233
           Y  +  A+ A  RL
Sbjct: 249 YPQSNAAQVARQRL 262


>gi|260827198|ref|XP_002608552.1| hypothetical protein BRAFLDRAFT_236015 [Branchiostoma floridae]
 gi|229293903|gb|EEN64562.1| hypothetical protein BRAFLDRAFT_236015 [Branchiostoma floridae]
          Length = 1183

 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 77/232 (33%), Gaps = 58/232 (25%)

Query: 73  FSKAYEYFNQCSRDFPF--------AGVAR-KSLLMSAFVQYS-----AGKYQQAASLG- 117
           +  A   + +  R+ P           +AR +  +  A   +         +  A SL  
Sbjct: 518 YQDAERLYKEVLREHPNYVDCYLRLGCMARDRGQIYEASDWFKEALQINQDHPDAWSLIG 577

Query: 118 -------------EEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPYDQ----RATKLM 158
                        +++     +P++ +  Y    +G  + Q +     D+    R     
Sbjct: 578 NLHLAKQEWGPGQKKFERILKHPDTASDAYSMLALGNVWLQTLHQPQRDKEKEKRHQDRA 637

Query: 159 LQYMSRIVERYTNSPYVKG------ARFY-VTVGRNQLAA-KE---------VEIGRYYL 201
           L    +++     + Y         A+   +   R+  A  +E         + +   Y+
Sbjct: 638 LAMYKQVLRNDPKNLYAANGIGAVLAQKNCIREARDVFAQVREATADMRDVWLNLAHIYV 697

Query: 202 KRGEYVAAIPRFQLVLANY---SDAEHAEEAMARLVEAYVALALMDEAREVV 250
           ++ +YV+AI  ++  L  +    D     + +  L  AY  L    E R+++
Sbjct: 698 EQRQYVSAIQMYENCLKKFYKCQDT----DVLLYLARAYYKLGKHKECRQIL 745


>gi|332297631|ref|YP_004439553.1| Tetratricopeptide TPR_1 repeat-containing protein [Treponema
           brennaborense DSM 12168]
 gi|332180734|gb|AEE16422.1| Tetratricopeptide TPR_1 repeat-containing protein [Treponema
           brennaborense DSM 12168]
          Length = 706

 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 68/231 (29%), Gaps = 40/231 (17%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE-YF 80
           +A  I   +AVC L          V + +    R  +  +++       Q++  A E Y+
Sbjct: 9   YATGIRIRLAVCCLAACLVS----VPVSAAAPARTSKYYFDQGQKLQSAQDWYGAVESYY 64

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
                +  +      +    A   Y  G+Y  A +  E     Y        +  L G  
Sbjct: 65  EAVRLNPAYGA----AWFSLAECNYEMGEYSLALTYLES-AGTYSG--KTAQILNLTGFC 117

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
           Y  +        +A     +   +++  Y N    +     + +   +L+  E       
Sbjct: 118 YLGL--------QAYGDAERTFKQVLASYPNDIDARFGLAQLDILEGRLSGAE------- 162

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
                Y+ A+ R          +     A+  L      +    +A   + 
Sbjct: 163 ---QLYLDALKR--------QTSN--RRALLSLSLVSAEMGKTADAERYIE 200


>gi|319786287|ref|YP_004145762.1| tol-pal system protein YbgF [Pseudoxanthomonas suwonensis 11-1]
 gi|317464799|gb|ADV26531.1| tol-pal system protein YbgF [Pseudoxanthomonas suwonensis 11-1]
          Length = 268

 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 43/125 (34%), Gaps = 8/125 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A   LK  +++ + E F      +P    A  +L       Y+ G Y  AA      
Sbjct: 146 YDAAFKTLKAADYAASAEAFQGFLDAYPAGVYAPNALYWLGESYYATGNYALAAQQFRAL 205

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           + +YP           +G+S           +   +  L  ++++  +Y  +   + A  
Sbjct: 206 MERYPTHDKTPGALLKLGLS--------QLGEGEVRQALSTLAQVGSQYPGTDAARIAAD 257

Query: 181 YVTVG 185
            +   
Sbjct: 258 RLRSI 262



 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 39/110 (35%), Gaps = 14/110 (12%)

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
               ++ Y    Y   A +++              G  Y   G Y  A  +F+ ++  Y 
Sbjct: 165 FQGFLDAYPAGVYAPNALYWL--------------GESYYATGNYALAAQQFRALMERYP 210

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
             +    A+ +L  + +    + +A   ++ +  +YP    AR     ++
Sbjct: 211 THDKTPGALLKLGLSQLGEGEVRQALSTLAQVGSQYPGTDAARIAADRLR 260



 Score = 40.1 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 27/76 (35%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
              V     +Y     +    N++ A + F      +P       +LL     Q   G+ 
Sbjct: 173 PAGVYAPNALYWLGESYYATGNYALAAQQFRALMERYPTHDKTPGALLKLGLSQLGEGEV 232

Query: 111 QQAASLGEEYITQYPE 126
           +QA S   +  +QYP 
Sbjct: 233 RQALSTLAQVGSQYPG 248


>gi|156743163|ref|YP_001433292.1| hypothetical protein Rcas_3220 [Roseiflexus castenholzii DSM 13941]
 gi|156234491|gb|ABU59274.1| Tetratricopeptide TPR_2 repeat protein [Roseiflexus castenholzii DSM
            13941]
          Length = 1178

 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 64/220 (29%), Gaps = 25/220 (11%)

Query: 64   AVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
                ++  +   A   +         F      +L   A  Q+ AG+  +A         
Sbjct: 965  GEARVRVGDVDDAISAYQQALQLRSAFPE----ALFGLAQAQFGAGRIDEALRNVNR--A 1018

Query: 123  QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK--GARF 180
                S+  +  + L+G  Y Q          A K  +    R+ E   +           
Sbjct: 1019 LEQRSRYAE-AFLLLGKIYEQQ-GYSTRALDAYKQAVDANPRLAE--PHFRRALLLIRAD 1074

Query: 181  YVTVGRNQL----------AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
             ++  R+ L          A     +GR Y  +  + AA+ RF+  +       +  EA 
Sbjct: 1075 RLSEARDDLEIAARLEPNFAEAHYWLGRVYFAQRNFQAAVNRFREAVNR--RNGNYPEAR 1132

Query: 231  ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
                 A   L  ++ A      +  +     WA      +
Sbjct: 1133 YYQGRAEEQLGDLNAAIRSFDTVANQNDDALWANEARAAL 1172


>gi|332534219|ref|ZP_08410064.1| TPR repeat containing exported protein [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332036299|gb|EGI72770.1| TPR repeat containing exported protein [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 231

 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 49/141 (34%), Gaps = 23/141 (16%)

Query: 50  SVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           S +    + E YE+AV   +K++ + +A   F      +P +  A           Y  G
Sbjct: 104 SYSSDLSENEAYERAVALIMKDKRYDQAIPEFQTFLTTYPNSVYASN-------AHYWLG 156

Query: 109 KY----QQAASLGEEY---ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           +            E +   + ++P S         +G         +  DQ +     + 
Sbjct: 157 QLLTIKNDGVKAVEHFKVVVNEFPNSNKRPDAMLKLG--------TLLQDQGSAAQAQKI 208

Query: 162 MSRIVERYTNSPYVKGARFYV 182
           +S ++ +Y ++   K A   +
Sbjct: 209 LSDLINQYPSTTAAKLATDRL 229



 Score = 43.6 bits (102), Expect = 0.026,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 45/130 (34%), Gaps = 21/130 (16%)

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
           Y   ++     +            +      +  Y NS Y   A +++            
Sbjct: 115 YERAVALIMKDKRYD-------QAIPEFQTFLTTYPNSVYASNAHYWLGQLLTI------ 161

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
                   + + V A+  F++V+  + ++    +AM +L           +A++++S + 
Sbjct: 162 --------KNDGVKAVEHFKVVVNEFPNSNKRPDAMLKLGTLLQDQGSAAQAQKILSDLI 213

Query: 255 ERYPQGYWAR 264
            +YP    A+
Sbjct: 214 NQYPSTTAAK 223


>gi|258593153|emb|CBE69465.1| protein of unknown function [NC10 bacterium 'Dutch sediment']
          Length = 739

 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 38/119 (31%), Gaps = 18/119 (15%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAG----VARKSLLMSAFVQYSAGKYQQAASLGEE 119
            +   + +++  A    +      P        + ++L             +QA      
Sbjct: 273 GISHFQRRDYRLAISLLS------PMGQDRSLYSAEALYWIGRSYARVDDREQAVMAWTR 326

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            I  YP S       YL+ + +         D    K  +Q + R++  Y +S ++  A
Sbjct: 327 LIDIYPNSPFTAESLYLMALQHI--------DNSQPKRAIQTLDRLIRNYQSSRFIDAA 377



 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 17/113 (15%), Positives = 39/113 (34%), Gaps = 8/113 (7%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
               +Y     + +  +  +A   + +    +P +    +SL + A       + ++A  
Sbjct: 300 SAEALYWIGRSYARVDDREQAVMAWTRLIDIYPNSPFTAESLYLMALQHIDNSQPKRAIQ 359

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
             +  I  Y  S+ +D   +     + +        Q A K  L  + R+  R
Sbjct: 360 TLDRLIRNYQSSRFIDAALWARAWIHYR--------QSALKRALADLQRLQAR 404



 Score = 42.8 bits (100), Expect = 0.054,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 62/186 (33%), Gaps = 40/186 (21%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQC--SRDFPFA----GVARKSLLMSAFVQYSAGK 109
              E +E+A+   +   +S A   F         PF         ++ L S    +    
Sbjct: 222 TADEQFERALSLYRSSQYSLAITAFAPFLDEGSRPFDGGQDRFTSRARLWSGISHFQRRD 281

Query: 110 YQQAASLG-----EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y+ A SL      +   + Y          Y +G SYA++           +  +   +R
Sbjct: 282 YRLAISLLSPMGQDR--SLY-----SAEALYWIGRSYARVDDR--------EQAVMAWTR 326

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           +++ Y NSP+   + + + +                +   +   AI     ++ NY  + 
Sbjct: 327 LIDIYPNSPFTAESLYLMAL------QH--------IDNSQPKRAIQTLDRLIRNYQSSR 372

Query: 225 HAEEAM 230
             + A+
Sbjct: 373 FIDAAL 378



 Score = 37.0 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 28/76 (36%), Gaps = 6/76 (7%)

Query: 196 IGRYYLK---RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           IGR Y +   R + V A  R   ++  Y ++    E++  +   ++  +    A + +  
Sbjct: 307 IGRSYARVDDREQAVMAWTR---LIDIYPNSPFTAESLYLMALQHIDNSQPKRAIQTLDR 363

Query: 253 IQERYPQGYWARYVET 268
           +   Y    +      
Sbjct: 364 LIRNYQSSRFIDAALW 379


>gi|260774143|ref|ZP_05883058.1| TPR domain protein in aerotolerance operon [Vibrio metschnikovii
           CIP 69.14]
 gi|260611104|gb|EEX36308.1| TPR domain protein in aerotolerance operon [Vibrio metschnikovii
           CIP 69.14]
          Length = 616

 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/113 (11%), Positives = 37/113 (32%), Gaps = 10/113 (8%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK----AVLFLKEQNFSKAY 77
             L+   +++      W  Q+ + +      D +    ++ +     V   +  ++  A 
Sbjct: 328 LTLSSGLTVSPAHASAWLNQNQQALRAYQQGDYQTAARLFSQPEWQGVARYQAGDYQGAI 387

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           +  +Q     P    + +     A     AG+  +A    +  +   P+  + 
Sbjct: 388 DVLSQIKN--P----SEQVQYNLANAFAQAGELTEALQRYQHILANNPQHADA 434


>gi|242279478|ref|YP_002991607.1| tol-pal system protein YbgF [Desulfovibrio salexigens DSM 2638]
 gi|242122372|gb|ACS80068.1| tol-pal system protein YbgF [Desulfovibrio salexigens DSM 2638]
          Length = 307

 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 53/147 (36%), Gaps = 24/147 (16%)

Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
           P         Y  G++  +        +R  K  ++ M+  ++ +     V  A F+   
Sbjct: 182 PADP--AQALYDKGLALFK--------ERKYKDSIRDMAEFIKTFPKHKLVPNAIFWEGE 231

Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
                          Y +  +Y  A  ++Q V+A +S +     A+ +     + L    
Sbjct: 232 C--------------YYQLKDYANAALKYQGVIAKHSKSNKYRPALLKQGLCLIKLGKTK 277

Query: 245 EAREVVSLIQERYPQGYWARYVETLVK 271
             R ++  + ++ P    A+  ++++K
Sbjct: 278 SGRYILEDLIKKAPDSAEAKRAQSIIK 304



 Score = 46.3 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/140 (12%), Positives = 47/140 (33%), Gaps = 8/140 (5%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
            +         + +Y+K +   KE+ +  +     +  + FP   +   ++       Y 
Sbjct: 176 EVKKTEPADPAQALYDKGLALFKERKYKDSIRDMAEFIKTFPKHKLVPNAIFWEGECYYQ 235

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
              Y  AA   +  I ++ +S          G+   ++          TK     +  ++
Sbjct: 236 LKDYANAALKYQGVIAKHSKSNKYRPALLKQGLCLIKL--------GKTKSGRYILEDLI 287

Query: 167 ERYTNSPYVKGARFYVTVGR 186
           ++  +S   K A+  +   +
Sbjct: 288 KKAPDSAEAKRAQSIIKNLK 307



 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 49/129 (37%), Gaps = 14/129 (10%)

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           ++L       +   KY+ +     E+I  +P+ K V    +  G  Y Q+          
Sbjct: 187 QALYDKGLALFKERKYKDSIRDMAEFIKTFPKHKLVPNAIFWEGECYYQLKD-------Y 239

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK---RGEYVAA-I 210
               L+Y   ++ +++ S   + A     +   +L     + GRY L+   +    +A  
Sbjct: 240 ANAALKY-QGVIAKHSKSNKYRPALLKQGLCLIKLGKT--KSGRYILEDLIKKAPDSAEA 296

Query: 211 PRFQLVLAN 219
            R Q ++ N
Sbjct: 297 KRAQSIIKN 305


>gi|192289725|ref|YP_001990330.1| tol-pal system protein YbgF [Rhodopseudomonas palustris TIE-1]
 gi|192283474|gb|ACE99854.1| tol-pal system protein YbgF [Rhodopseudomonas palustris TIE-1]
          Length = 345

 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/97 (13%), Positives = 27/97 (27%), Gaps = 8/97 (8%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
                        Y  A      +  +YP++       Y +G S+ Q         +  +
Sbjct: 224 EFDLGIGYMQRRDYALAEETMRNFAQKYPDNPLTADAQYWLGESFFQR--------QMYR 275

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
              +    +  ++  S     A   +    + L  KE
Sbjct: 276 DAAEAFLAVTSKHEKSGKAPDALLRLGQSLSALKEKE 312



 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 45/110 (40%), Gaps = 14/110 (12%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           +R   L  + M    ++Y ++P    A++++              G  + +R  Y  A  
Sbjct: 234 RRDYALAEETMRNFAQKYPDNPLTADAQYWL--------------GESFFQRQMYRDAAE 279

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            F  V + +  +  A +A+ RL ++  AL   + A   +  I  +YPQ  
Sbjct: 280 AFLAVTSKHEKSGKAPDALLRLGQSLSALKEKEAACAALGEIGRKYPQAS 329



 Score = 35.5 bits (81), Expect = 8.0,   Method: Composition-based stats.
 Identities = 15/134 (11%), Positives = 45/134 (33%), Gaps = 15/134 (11%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
              +  R+ ++  + +++ ++++ A E     ++ +P   +   +        +    Y+
Sbjct: 216 PPSQTPRDEFDLGIGYMQRRDYALAEETMRNFAQKYPDNPLTADAQYWLGESFFQRQMYR 275

Query: 112 QAASLGEEYITQYPESK---NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
            A    E ++    + +           +G S + +        +  +     +  I  +
Sbjct: 276 DA---AEAFLAVTSKHEKSGKAPDALLRLGQSLSAL--------KEKEAACAALGEIGRK 324

Query: 169 YTN-SPYVKGARFY 181
           Y   S  VK A   
Sbjct: 325 YPQASSSVKKAVDR 338


>gi|163753728|ref|ZP_02160851.1| hypothetical protein KAOT1_18937 [Kordia algicida OT-1]
 gi|161325942|gb|EDP97268.1| hypothetical protein KAOT1_18937 [Kordia algicida OT-1]
          Length = 603

 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 59/161 (36%), Gaps = 9/161 (5%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV--YEKAVLFLKEQNFSKAYEYFNQCSR 85
              +V  L+  +    + +  D+  +   Q  +  Y KA L   ++  ++A        +
Sbjct: 445 LKSSVSQLIANDALQLKLIISDNSLEDSTQTALKKYAKADLLKYQKKETEAIATLEDILQ 504

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
           +     +  ++LLM A +    G+Y +A    ++ I  + +   VD  Y+ +   Y    
Sbjct: 505 NHKGEKIEDEALLMQAKLYEKRGEYDKARLNYKKIIEFFKDDILVDDAYFAMAQLYLHQF 564

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
            D        +    +   I+  + +S +   A+      R
Sbjct: 565 DDP-------EKAKDFFEEIIFNHQDSIHYVEAQKAYRKLR 598


>gi|218674236|ref|ZP_03523905.1| hypothetical protein RetlG_23392 [Rhizobium etli GR56]
          Length = 329

 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/142 (14%), Positives = 47/142 (33%), Gaps = 14/142 (9%)

Query: 33  CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
             +       +          +  + + Y+ A   +   ++  A + FNQ    +P +  
Sbjct: 181 ASIGSGPIPDANGRTPQQTASLGSEADQYKAAYGHVLSGDYGTAEQEFNQYIARYPSSAR 240

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP---ESKNVDYVYYLVGMSYAQMIRDVP 149
           A  +        YS GKY +A    + ++  +     S+    +   +GMS A +     
Sbjct: 241 AADANFWLGEALYSQGKYNEA---AKTFLNAHQKYGGSEKAPEMLLKLGMSLAALDNK-- 295

Query: 150 YDQRATKLMLQYMSRIVERYTN 171
                 +     +  + +RY  
Sbjct: 296 ------ETACATLREVSKRYPK 311



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 38/104 (36%), Gaps = 14/104 (13%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
             Q  ++ + RY +S     A F++                    +G+Y  A   F    
Sbjct: 224 AEQEFNQYIARYPSSARAADANFWLGEAL--------------YSQGKYNEAAKTFLNAH 269

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             Y  +E A E + +L  +  AL   + A   +  + +RYP+  
Sbjct: 270 QKYGGSEKAPEMLLKLGMSLAALDNKETACATLREVSKRYPKAS 313


>gi|221509347|gb|EEE34916.1| TPR domain-containing protein, putative [Toxoplasma gondii VEG]
          Length = 823

 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 60/195 (30%), Gaps = 51/195 (26%)

Query: 37  GWERQSSRDVYL---DSVTDVRYQREVYEKAVLFLKEQNFSKAY----EYFNQCSRDFPF 89
           G     S++  +    +   +       ++     +E+N+  A     +   Q    FP 
Sbjct: 111 GCSHDHSKERQIYEKPTGEKIDAAERFRQEGNAAFREKNYGLAAVNYRKALLQFDYTFPD 170

Query: 90  AGVARKSL--------LMSAFVQYSAGKYQQAASLGEEYIT------QYPESKNVDYVYY 135
               +K +        L  A  +     Y++       YI         P++      YY
Sbjct: 171 TDEEQKRMDSVKLPCHLNLAACKLQQQDYEEV------YIQCRLALEMDPKNTK---AYY 221

Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
             G+++ Q    V           + +   + +  NS  ++ A   + + R ++      
Sbjct: 222 RRGLAHLQQDNFV--------KAKEDLMEALTQEPNSKEIRDA---LQLLREKIHR---- 266

Query: 196 IGRYYLKRGE--YVA 208
               Y +R    Y A
Sbjct: 267 ----YHRRSAMTYKA 277


>gi|237837191|ref|XP_002367893.1| TPR domain-containing protein [Toxoplasma gondii ME49]
 gi|211965557|gb|EEB00753.1| TPR domain-containing protein [Toxoplasma gondii ME49]
          Length = 823

 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 60/195 (30%), Gaps = 51/195 (26%)

Query: 37  GWERQSSRDVYL---DSVTDVRYQREVYEKAVLFLKEQNFSKAY----EYFNQCSRDFPF 89
           G     S++  +    +   +       ++     +E+N+  A     +   Q    FP 
Sbjct: 111 GCSHDHSKERQIYEKPTGEKIDAAERFRQEGNAAFREKNYGLAAVNYRKALLQFDYTFPD 170

Query: 90  AGVARKSL--------LMSAFVQYSAGKYQQAASLGEEYIT------QYPESKNVDYVYY 135
               +K +        L  A  +     Y++       YI         P++      YY
Sbjct: 171 TDEEQKRMDSVKLPCHLNLAACKLQQQDYEEV------YIQCRLALEMDPKNTK---AYY 221

Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
             G+++ Q    V           + +   + +  NS  ++ A   + + R ++      
Sbjct: 222 RRGLAHLQQDNFV--------KAKEDLMEALTQEPNSKEIRDA---LQLLREKIHR---- 266

Query: 196 IGRYYLKRGE--YVA 208
               Y +R    Y A
Sbjct: 267 ----YHRRSAMTYKA 277


>gi|328948519|ref|YP_004365856.1| hypothetical protein Tresu_1662 [Treponema succinifaciens DSM 2489]
 gi|328448843|gb|AEB14559.1| Tetratricopeptide TPR_1 repeat-containing protein [Treponema
           succinifaciens DSM 2489]
          Length = 711

 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/207 (13%), Positives = 59/207 (28%), Gaps = 48/207 (23%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKY 110
              +   E++ +A    ++  +  A + + +     P +      +L   A   Y+ G Y
Sbjct: 24  AQKKSALELFNQAQELQQQSRWFDAVDLYQEALLLNPQYGD----ALYNLALCHYALGSY 79

Query: 111 QQAASLGEEYITQYPESKNVDYV------YYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
             +    +         +   Y         L G+S   + R                S+
Sbjct: 80  DLSVQYAD---------EASKYARNFSDIQNLKGLSLISLGR--------VNEAKDVFSQ 122

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           I+++Y N                 LA  ++  GR  +    Y  A+ R            
Sbjct: 123 ILKKYPN-----DVNARFG-----LAELDLLDGRLTVAESRYQDALKR----------DA 162

Query: 225 HAEEAMARLVEAYVALALMDEAREVVS 251
              +A+  L      +   + +   + 
Sbjct: 163 SNRKALLSLALVSAEMGKPEVSENYIR 189


>gi|145518792|ref|XP_001445268.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124412712|emb|CAK77871.1| unnamed protein product [Paramecium tetraurelia]
          Length = 467

 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 42/115 (36%), Gaps = 5/115 (4%)

Query: 35  LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF-PFAGVA 93
           LV ++ +  +   L         ++  E      K +N+ +A + + + +  F      A
Sbjct: 112 LVDFKEKQKQKWELSDEEKTNEAKKFKELGTTAFKAKNYPEAIKQYLEAASYFEAETEFA 171

Query: 94  -RKSL---LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
             + L   L  +   Y    Y+++     + I   P +  +   YY   ++Y+  
Sbjct: 172 HEQKLASHLNLSLCYYYTKDYKESVDQATKVIQDKPNNAQLVKAYYRRAIAYSSQ 226


>gi|118394721|ref|XP_001029723.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89283985|gb|EAR82060.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 1093

 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 83/235 (35%), Gaps = 47/235 (20%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           +A +F   +++SKA EYF +  +  P   +  ++ L  A+  +   K++ +    +  I 
Sbjct: 168 QAQIFFFAKDYSKALEYFKEALQKNP--KLPGRARLGLAYCFFMQKKFELSKRAFQRVID 225

Query: 123 Q-----------------------YPESKNVDY--------VYYLVGMSYAQMIRDVPYD 151
                                   Y ++ N  Y        V Y +   Y     +V   
Sbjct: 226 LDKTVYEAYLGLAILAFQRKEWNVYIQNLNKAYELNKSSPLVLYYIAEFYYIQQDNVNT- 284

Query: 152 QRATKLMLQYMSRIVERYTNSP----YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
           ++     +  +  + +   +S     YVK  R      +++L   ++ IG  + +  +Y 
Sbjct: 285 KKMAFQAINNLKNLPKILMDSDKLKTYVKQTRSDFYDIKSRL--YQM-IGSCFHREQQYD 341

Query: 208 AAIPRFQLVLANYSD-----AEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
            A  R + +     +          + +A L ++ +AL    + ++   L    Y
Sbjct: 342 QAFRRLEEIRNQCPENEKELTFEFFKPLAYL-QSKLALGQNKQTQQQYYLKALNY 395


>gi|20090471|ref|NP_616546.1| TPR domain-containing protein [Methanosarcina acetivorans C2A]
 gi|19915489|gb|AAM05026.1| TPR-domain containing protein [Methanosarcina acetivorans C2A]
          Length = 1885

 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 84/228 (36%), Gaps = 44/228 (19%)

Query: 40   RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
            +  + +   +   +      +Y K ++F++++ + KA E F++ +   P           
Sbjct: 897  KAKNGEASGEESENSHKDSPLYWKGLMFIRQEAYEKALEIFSKLTEQNPQ---------- 946

Query: 100  SAFV---QY------SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
              F     +        GK+++A+   ++ +   P  +++  +YY +G+S  ++      
Sbjct: 947  --FAEGWYFIGMSCSKLGKHEEASKALKKALEIDPAFRDLHDIYYRLGLSCFEL------ 998

Query: 151  DQRATKLMLQYMSRIVERYT-NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
                 +  L+     +     NS             ++ +  K + +    L+ G Y  A
Sbjct: 999  --GNFEEALKAFEEALSTVPENSERNPD------EAQDIMYKKSLSL----LRLGRYAEA 1046

Query: 210  IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV-VSLIQER 256
               F+ VLA         EA+A L  A        EA E+   ++ + 
Sbjct: 1047 ESGFKEVLAL---DPANTEALAHLSTACFKKGHYKEALEIFERVLSQN 1091



 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 75/238 (31%), Gaps = 33/238 (13%)

Query: 30   IAVCFLVGWERQSSRDVYLDSVTDVRYQ--REVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
            ++   + G ++        +   ++       + +K +  L    + +A + F       
Sbjct: 1494 LSGLVMRGLDQNEEAVEVFEKALELNPALTAALEQKGLGLLALCRYEEARDAFGSALALN 1553

Query: 88   PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
            P        L   A   Y    +++A+   E  +   P   +     Y++G++  ++   
Sbjct: 1554 PEN---VDILYSRAVASYKLLDFEEASKDLERLLLFAPGFPDYTKACYMLGIASIEL--- 1607

Query: 148  VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
                 +  +  LQ +  ++ER         A + + +                    EY 
Sbjct: 1608 -----QDYERALQALDLVLEREPAHR---DALYNMALVL--------------FNLEEYE 1645

Query: 208  AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
             A   F+ +L     +    E++  L    + L  + EA +         P+   A Y
Sbjct: 1646 EAARTFEQLLEA---SPEDPESLNYLGLCLLELEDLKEALKAFEKAALFNPKNEEALY 1700



 Score = 44.7 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 65/191 (34%), Gaps = 38/191 (19%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
              E +++ +  +K + + KA   FN+     P     +++L           K Q+A  
Sbjct: 4   TNDEAFQRGLDLVKRKRYEKAINTFNKILDKDPDH---KEALFHRGLALLETEKTQEALD 60

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
              + +   P + +     Y  G  +A + R         +  L+     +E   ++P  
Sbjct: 61  SFNDALQLEPGNSD---ALYRKGTCFAALGR--------FEEALEAYESALESSPDTP-- 107

Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLK----RGEYVAA----------IPRFQLVLANYS 221
               + + +   ++   E  I  +  K    + EY AA            R++  L ++ 
Sbjct: 108 -EIWYMMGLAFAEMERAEASILCF-EKALELKPEYTAACCAMGTVAGKAERYEEALEDF- 164

Query: 222 DAEHAEEAMAR 232
                E A+  
Sbjct: 165 -----ERALEI 170



 Score = 42.0 bits (98), Expect = 0.084,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 90/256 (35%), Gaps = 55/256 (21%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREV--------YEKAVLFLKEQNFSKAYEYFNQ 82
           A C  +G       + Y +++ D     E+        Y K ++  K + +  A E F+ 
Sbjct: 142 AACCAMG-TVAGKAERYEEALEDFERALEISPRNSEAWYAKGLILAKIEKYENALECFDF 200

Query: 83  CSRDFPFAGVA-RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
             R+ P    A  +  L+ A    + GK ++A    E+++ ++P ++      Y  G+  
Sbjct: 201 LIREKPKDTAALEQKCLILA----NLGKNEEALGALEDFLKKFPANEA---ALYHKGILL 253

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
           +++ R         +   + +S++++                                + 
Sbjct: 254 SELSR--------YEDAERTISKVLKLNPGHREA------------------------WF 281

Query: 202 KRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           ++G  +  + R    +  + +A        EA      A + L + +EA E    I E Y
Sbjct: 282 RKGFALVQLLRLNEAIEAFDEAIRLDPAYFEAWNYKCFALMKLEVYEEALEAFDTILETY 341

Query: 258 PQGY--WARYVETLVK 271
           P     W      L+K
Sbjct: 342 PDMEEIWYNRALALLK 357



 Score = 41.3 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 47/135 (34%), Gaps = 19/135 (14%)

Query: 53   DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL-LMSAFVQYSAGKYQ 111
            D    + VY   V+  K++ +  A   F +     P+   + + L L  A      G Y+
Sbjct: 1760 DPNNIKAVYNVGVVCFKQKLYETAARAFKEALTINPWHEPSLRYLGLSLA----KTGDYE 1815

Query: 112  QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
             A    E+ +   P+           G+   ++ +            ++    ++  Y N
Sbjct: 1816 DALKAFEKLLRIKPQDPQ---AMNYRGVLLGKLEK--------YGEAIKAFDEVLSIYPN 1864

Query: 172  SPYVKGARFYVTVGR 186
               + GA+  + V +
Sbjct: 1865 ---MAGAKEKLEVLK 1876



 Score = 40.5 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 7/68 (10%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAFVQYSAGKYQQAASLGE 118
           Y +A+  LK QNF +A   F + +   P       ++  L++      AGKY++A    +
Sbjct: 349 YNRALALLKLQNFPEAARSFARVTELDPGNTDAWFQQGRLLA-----RAGKYEEALETFD 403

Query: 119 EYITQYPE 126
             +  +P+
Sbjct: 404 RLLEYHPD 411



 Score = 37.8 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 59/164 (35%), Gaps = 33/164 (20%)

Query: 71   QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES-KN 129
            + + +A + F+   +  P      K++     V +    Y+ AA   +E +T  P    +
Sbjct: 1744 EQYREALKSFDNVLKKDPNN---IKAVYNVGVVCFKQKLYETAARAFKEALTINPWHEPS 1800

Query: 130  VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
            + Y    +G+S A+            +  L+   +++      P    A  Y  V   +L
Sbjct: 1801 LRY----LGLSLAKT--------GDYEDALKAFEKLLRIKPQDP---QAMNYRGVLLGKL 1845

Query: 190  AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
                           +Y  AI  F  VL+ Y +   A+E +  L
Sbjct: 1846 --------------EKYGEAIKAFDEVLSIYPNMAGAKEKLEVL 1875


>gi|145517342|ref|XP_001444554.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124411976|emb|CAK77157.1| unnamed protein product [Paramecium tetraurelia]
          Length = 456

 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 43/115 (37%), Gaps = 5/115 (4%)

Query: 35  LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF-PFAGVA 93
           LV ++ +  +   L         ++  E      KE+N+ +A + + + +  F      A
Sbjct: 112 LVDFKEKQKQKWELSDEEKTTEAKKFKELGTTAFKEKNYPEAIKQYLEAASYFEAETEFA 171

Query: 94  -RKSL---LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
             + L   L  +   Y    Y+++     + I   P    +   YY   ++++ +
Sbjct: 172 HEQKLASHLNLSLCYYYTKDYKESLDHASKVINDKPNHAQLVKAYYRRAIAHSSL 226


>gi|253582116|ref|ZP_04859340.1| tetratricopeptide repeat family protein [Fusobacterium varium ATCC
           27725]
 gi|251836465|gb|EES65002.1| tetratricopeptide repeat family protein [Fusobacterium varium ATCC
           27725]
          Length = 950

 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 91/235 (38%), Gaps = 42/235 (17%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           Y+R +Y+  + +L ++N+SKA E F +    ++ + ++     ++L  A   Y+   Y++
Sbjct: 130 YERALYDSGMTYLAKENYSKAEEMFQRVIQMNKKY-YSE----AILSMAMSSYNKADYKK 184

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
                 EY     ++KN   +YYL G +Y ++         +T+  + Y  ++  +   S
Sbjct: 185 TLLFLNEYSNGKDKNKNQSLLYYLYGSTYYKL--------NSTEDAIVYFQKVANKDKIS 236

Query: 173 PYVKGARFYVTVG------RNQLAAK--------EV-----EIGRYYLKRGEYVAAIPRF 213
            Y K +   +          N +           E       IG  Y  RGEY  A+  +
Sbjct: 237 SYGKKSILSLIEIYSNRGDVNSMQRYLTMLENTKEYGEAMRMIGDLYATRGEYEKAVGYY 296

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER--YPQGYWARYV 266
                   +  +  + M     +   L  + EA++    ++    Y Q  +  + 
Sbjct: 297 SKT-----NTPNDPKLMYGYGFSLYKLNRLKEAQKYFEGLRNTTYYNQSLYYIFA 346



 Score = 38.9 bits (90), Expect = 0.84,   Method: Composition-based stats.
 Identities = 42/221 (19%), Positives = 71/221 (32%), Gaps = 29/221 (13%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS-RDFPFAGVARKSLLMSAFVQ 104
            YL+       +  +Y K + F+    +++A   FNQ    D     +  K         
Sbjct: 500 TYLNDEGTESSKENIYLKGIAFVGMGKYAEAETVFNQLEVDDASDTVLQTKVKFNKMRNY 559

Query: 105 YSAGKYQQAASLGEEYITQ-YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           +  GKY+ A   GEEY+    PE KN   V   + +SY +               L    
Sbjct: 560 FLWGKYEDAIKYGEEYLQLENPEGKN--EVMDKLAISYFR---------------LDNFE 602

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
           +  E Y            ++      A    +I   Y     +  A   ++ V   Y D 
Sbjct: 603 KSREYY----------NKLSTVPEFEAYGRFQIADTYYAEKNFEKAKEEYKHVAEQYGDG 652

Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
           ++ E+A    +   + L   D   +       +YP      
Sbjct: 653 QYGEKAYYWYLTTLINLGETDIFEKEKDAFLIKYPGSKMKD 693



 Score = 38.6 bits (89), Expect = 0.95,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 42/106 (39%), Gaps = 15/106 (14%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           Q+   + +      ++RY +S Y +  +                I + Y  + +Y  AI 
Sbjct: 35  QKKFSMAITESVSFLKRYPDSRYTRNIQDR--------------IAKTYFLQEDYNNAIK 80

Query: 212 RFQLVLANYS-DAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            F+++L N    A+  +E    L+++Y AL     +   +  + + 
Sbjct: 81  YFKIILMNNDVKAKEKDEINFYLMKSYTALEDTKNSDFYMEALDKN 126


>gi|168704035|ref|ZP_02736312.1| hypothetical protein GobsU_31164 [Gemmata obscuriglobus UQM 2246]
          Length = 414

 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 52/157 (33%), Gaps = 7/157 (4%)

Query: 80  FNQCSRDFP---FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
                R          A K+L    +V +  G + +A     ++   + +S  +      
Sbjct: 185 LEALQRVHTHDITGPTADKALFWCGYVNFIRGNFSEADQFFSQFCELHKDSTLLPQAMAF 244

Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT----VGRNQLAAK 192
              +         YD R     L  +S                  +T      R+Q A K
Sbjct: 245 AIQAKNNATGGASYDGRKCAEALHLVSVAESSVPELANDPAMAEKLTRAKFAIRSQQAEK 304

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
           +  +  YY + G   +A+  ++LV   Y+  ++AE A
Sbjct: 305 DFRMAEYYERTGHPGSAVFYYELVRRRYAGTKYAEAA 341



 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 28/79 (35%), Gaps = 2/79 (2%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC-SRDFPFAGVARKSLL 98
             +++ +   S  D    +++   A    +  ++ +A   F            +A ++  
Sbjct: 39  SSAAKPILSSSYNDPEADQKL-AAAEQLYQSGDYKQALGQFRTLADNQSNPKELAERARF 97

Query: 99  MSAFVQYSAGKYQQAASLG 117
           M    +Y  G Y +AA   
Sbjct: 98  MQGECRYQLGHYPEAADTY 116


>gi|154174683|ref|YP_001408802.1| TPR repeat-containing protein [Campylobacter curvus 525.92]
 gi|112803721|gb|EAU01065.1| TPR repeat-containing protein [Campylobacter curvus 525.92]
          Length = 286

 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 50/147 (34%), Gaps = 19/147 (12%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
            + SS +    S    +  ++V  + +  L     S+A EYF   ++   +   A    L
Sbjct: 154 AKSSSDNSTTKSNFSDKSDKDVMSEGIKLLNSGKTSEAAEYFEYLNKKG-YKPAASNFYL 212

Query: 99  -MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY---VYYLVGMSYAQMIRDVPYDQRA 154
              A   Y    Y  A    ++ I     S   DY   + Y   +S+ ++          
Sbjct: 213 GEIA---YKQKSYSTAIQYYQKSIQ---GSDKADYTSKLLYHTAISFDKI--------GD 258

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFY 181
           T+   ++   +   Y +S   + A   
Sbjct: 259 TQSANRFYKALKVGYPDSKEAQAAPSR 285


>gi|300113468|ref|YP_003760043.1| type IV pilus biogenesis/stability protein PilW [Nitrosococcus
           watsonii C-113]
 gi|299539405|gb|ADJ27722.1| type IV pilus biogenesis/stability protein PilW [Nitrosococcus
           watsonii C-113]
          Length = 257

 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/264 (14%), Positives = 76/264 (28%), Gaps = 43/264 (16%)

Query: 21  KFALTIFFSIAVCFLVGWER-QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           K  +   F+I +  L G     SS++    S+   +  +   +  V + K+    +A + 
Sbjct: 2   KLGMIGVFTITLLALAGCASIFSSQEQVTPSIDKEKAAKINVQLGVEYFKQGELEQALKK 61

Query: 80  FNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
             +  +  P   +     +LL         G+ ++A    +  I   P         Y  
Sbjct: 62  LERAIQQDPDIPSAYNAMALLKQ-----RLGQTEEAEKYFQRAIKLDPA--------YSE 108

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVER--Y--TNSPY--VKGARFYVTV------- 184
             +   +     Y+Q             V+   Y      Y     A   +         
Sbjct: 109 AQNNYGVFL---YNQGHYGDAEARFLEAVKNPLYGTPELAYENAGMAAQKLAEFDKAERY 165

Query: 185 ------GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS-DAEHAEEAMARLVEAY 237
                    +L      +     ++G Y     R Q  L  Y   A H  +++   ++  
Sbjct: 166 YRKALQLEPRLPKSLYHMAEINFEKGHYQ----RAQEYLQRYRVGARHTPKSLWLGIKIE 221

Query: 238 VALALMDEAREVVSLIQERYPQGY 261
             L   D       L++  +P   
Sbjct: 222 RELGNEDAVSSYALLLRRNFPDSP 245


>gi|260948502|ref|XP_002618548.1| hypothetical protein CLUG_02007 [Clavispora lusitaniae ATCC 42720]
 gi|238848420|gb|EEQ37884.1| hypothetical protein CLUG_02007 [Clavispora lusitaniae ATCC 42720]
          Length = 527

 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 50/154 (32%), Gaps = 33/154 (21%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASL 116
           ++ ++    LK+  +++A E + +  +  P      + ++ +       S  +Y  A + 
Sbjct: 8   KLKDEGNALLKQHKYAEAAEKYTEAIKLDPKNAVFYSNRAQV-----HISLEEYGSAIAD 62

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            +  +       N    YY  G+S   ++          K       +I+++  N     
Sbjct: 63  CDRALEV---DPNYAKAYYRKGVSLMALLN--------YKEAQGNFKKILQKLPNDRLTL 111

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
                     N            YLK+  +  AI
Sbjct: 112 ENYK---QCVN------------YLKKQAFERAI 130


>gi|119477237|ref|ZP_01617473.1| hypothetical protein GP2143_02904 [marine gamma proteobacterium
           HTCC2143]
 gi|119449600|gb|EAW30838.1| hypothetical protein GP2143_02904 [marine gamma proteobacterium
           HTCC2143]
          Length = 267

 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 2/109 (1%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
                 ++ +V    +     ++  Y++A   +  + F  A E F Q   D+P    A  
Sbjct: 120 GSGLNGNAENVVPPVIMVQPEEKTAYDRAYALVTSRRFDDALEAFKQFVIDYPEGKYAPN 179

Query: 96  SLLMSAFVQY--SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
           S      +    +    + A  +  + I QYP    +    Y +G  Y 
Sbjct: 180 SFYWMGELYQVITPQDLESARQVFTQLIDQYPGHAKIPDAMYKLGKVYF 228



 Score = 43.6 bits (102), Expect = 0.028,   Method: Composition-based stats.
 Identities = 14/105 (13%), Positives = 36/105 (34%), Gaps = 12/105 (11%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           R     L+   + V  Y    Y   + +++      +  +++E  R              
Sbjct: 155 RRFDDALEAFKQFVIDYPEGKYAPNSFYWMGELYQVITPQDLESAR------------QV 202

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           F  ++  Y       +AM +L + Y       ++++++  +   Y
Sbjct: 203 FTQLIDQYPGHAKIPDAMYKLGKVYFLKGNRSKSQDLLDQVIADY 247



 Score = 40.1 bits (93), Expect = 0.29,   Method: Composition-based stats.
 Identities = 14/89 (15%), Positives = 38/89 (42%), Gaps = 6/89 (6%)

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
            K+    A+   ++ ++  A    ++++  YPE K     +Y +G    Q+I       +
Sbjct: 141 EKTAYDRAYALVTSRRFDDALEAFKQFVIDYPEGKYAPNSFYWMG-ELYQVIT-----PQ 194

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYV 182
             +   Q  ++++++Y     +  A + +
Sbjct: 195 DLESARQVFTQLIDQYPGHAKIPDAMYKL 223


>gi|309792390|ref|ZP_07686857.1| TPR repeat-containing protein [Oscillochloris trichoides DG6]
 gi|308225545|gb|EFO79306.1| TPR repeat-containing protein [Oscillochloris trichoides DG6]
          Length = 2323

 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 67/207 (32%), Gaps = 42/207 (20%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +  Y++A  FL+     +A          FP +  A +          ++ ++ QA +  
Sbjct: 7   QAAYDQARAFLEVNKVEQAVAVAQHILEYFPESLEAHRI---LGEAYLASRQFDQAEAAF 63

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
              +   P  +N+   +  +G++Y +    +          +    + +E   +      
Sbjct: 64  SRVLNADP--ENIP-AHVGLGITYERQ-NKLDR-------AVTEFEQALEVRPD------ 106

Query: 178 ARFYVTVGRNQLAAKEVEI---------------GRYYLKRGEYVAAIPRFQLVLANYSD 222
               +   R+QL     E+                R Y K      AI  F+ V+  Y D
Sbjct: 107 ----MHELRSQLLRLYTEVWGNEGATLRLSRPGLARLYAKGNMLPQAIQEFRSVIDEYPD 162

Query: 223 AEHAEEAMARLVEAYVALALMDEAREV 249
                +A   L EA       D A EV
Sbjct: 163 ---RFDARVGLAEALWRDGQADVAAEV 186


>gi|116253707|ref|YP_769545.1| hypothetical protein RL3967 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115258355|emb|CAK09457.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 328

 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/142 (14%), Positives = 47/142 (33%), Gaps = 14/142 (9%)

Query: 33  CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
             +       +          +  + + Y+ A   +   ++S A   F Q    +P +  
Sbjct: 180 ATIGSGPIPDASPKTPQQTASLGSEADQYKAAYGHVLSGDYSTAELEFTQYITRYPSSAR 239

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP---ESKNVDYVYYLVGMSYAQMIRDVP 149
           A  +        YS GKY +A    + ++  +     S+    +   +GMS A +  +  
Sbjct: 240 AADANFWLGEALYSQGKYNEA---AKTFLNAHQKYGTSEKAPEMLLKLGMSLAALDNN-- 294

Query: 150 YDQRATKLMLQYMSRIVERYTN 171
                 +     +  + +RY  
Sbjct: 295 ------ETACATLREVSKRYPK 310



 Score = 45.5 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 37/104 (35%), Gaps = 14/104 (13%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
                ++ + RY +S     A F++                    +G+Y  A   F    
Sbjct: 223 AELEFTQYITRYPSSARAADANFWLGEAL--------------YSQGKYNEAAKTFLNAH 268

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             Y  +E A E + +L  +  AL   + A   +  + +RYP+  
Sbjct: 269 QKYGTSEKAPEMLLKLGMSLAALDNNETACATLREVSKRYPKAS 312



 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 26/86 (30%), Gaps = 8/86 (9%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
              +A+    +G Y  A     +YIT+YP S       + +G +           Q    
Sbjct: 207 QYKAAYGHVLSGDYSTAELEFTQYITRYPSSARAADANFWLGEALYS--------QGKYN 258

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYV 182
              +      ++Y  S         +
Sbjct: 259 EAAKTFLNAHQKYGTSEKAPEMLLKL 284


>gi|62184717|ref|YP_219502.1| putative lipoprotein [Chlamydophila abortus S26/3]
 gi|62147784|emb|CAH63530.1| putative lipoprotein [Chlamydophila abortus S26/3]
          Length = 318

 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 81/238 (34%), Gaps = 39/238 (16%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
           S  +     T     +E   +   +L++Q + KA   F   +  FP   +  ++L ++  
Sbjct: 29  SGKLSPQKFTPKYSTQEYLSEGKRYLEQQRYRKALLCFGMITHHFPQDPLYSEALYLTGV 88

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDY------VYYLVGMSYAQ-------MIRDVP 149
             +   +   A      Y+       + +Y      + Y +  S+AQ       ++   P
Sbjct: 89  CYFKNDQPDLAEKAFSAYLQL----PDANYSEELFLMKYSIAKSFAQGKRKRIFLLEGFP 144

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
               A    L+    I+  + N    K         +          G   + + ++  A
Sbjct: 145 KLANADADALRIYDEILTAFPN----KDLGAQALYLK----------GDLLVTKKDFPEA 190

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVA--------LALMDEAREVVSLIQERYPQ 259
           I  F+ +   +S    + ++  RL E Y+         L  ++ A+     I +++P 
Sbjct: 191 IKTFKKLTLQFSAHPLSPKSFVRLSEIYLMQAQKEPHNLQYLNLAKINEEAIAKQHPN 248



 Score = 42.4 bits (99), Expect = 0.075,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 53/152 (34%)

Query: 75  KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
            A   +++    FP   +  ++L +   +  +   + +A    ++   Q+         +
Sbjct: 152 DALRIYDEILTAFPNKDLGAQALYLKGDLLVTKKDFPEAIKTFKKLTLQFSAHPLSPKSF 211

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
             +   Y    +  P++ +   L       I +++ N P        V     + A    
Sbjct: 212 VRLSEIYLMQAQKEPHNLQYLNLAKINEEAIAKQHPNHPLNSVVSANVRSMCERYALGLY 271

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
             GR+Y K+ +  AA   +   + NY ++   
Sbjct: 272 STGRFYEKKKKPHAASIYYTTAIENYPESSLV 303


>gi|289613279|emb|CBI59873.1| unnamed protein product [Sordaria macrospora]
          Length = 460

 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/135 (13%), Positives = 40/135 (29%), Gaps = 26/135 (19%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
            +        ++ KA E++++    +   P    + ++             Y  A     
Sbjct: 13  NEGNKAFAAHDWPKAIEFYDKAIELNDKEP-TFWSNRAQ-----AHLKTEAYGYAIRDAT 66

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           + I   P        YY    +YA ++          K  ++     V+   ++     A
Sbjct: 67  KAIELNPGFVK---AYYRRATAYAAILN--------PKEAVKDFKTCVKIAPDNK---DA 112

Query: 179 RFYVTVG---RNQLA 190
           +  +        QLA
Sbjct: 113 KLKLVECEKIVRQLA 127


>gi|298246132|ref|ZP_06969938.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297553613|gb|EFH87478.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 678

 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/276 (13%), Positives = 72/276 (26%), Gaps = 61/276 (22%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
            +A     G   Q+      + V         Y   +  L  +N+++A            
Sbjct: 390 ILARPVGSGGSIQARPVAPSNGVAPASDPTVAYRAGLQALNNKNYAEAVNQLKLAQSQG- 448

Query: 89  FAGVARKSLLMSAFVQY----SAGKYQQAAS----LGEEYI-TQYPESKNVDY-VYYLVG 138
                    L  A+ QY         + +        E++      +  N  +  Y+ +G
Sbjct: 449 GTPYDILYNLGRAYRQYGLSVRDIDQKLSQENMKYAAEQFEAAL--QHSNASFNAYFQLG 506

Query: 139 MSY--------------------------AQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           M Y                             +     +Q + +    Y+   +      
Sbjct: 507 MCYRDLSLLPQAGQSFKKALSLTPDDPAVYYQLGLTSLEQGSFRDAESYLREGLRLSPEH 566

Query: 173 PYVKGA-------RFYVTVGRNQLAAKEVEI-----------GRYYLKRGEYVAAIPRFQ 214
             +  A                 L    V+I           GR +++  E+  A+  F+
Sbjct: 567 ALMLVALGRLYGETKRTRESIEAL-RHAVQIDASSWEAWYQLGRAHMRAKEWKYAVSAFE 625

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
                 S   +   A+      Y+ L    EAR+ +
Sbjct: 626 RARKTGSQNPNIYSAL---ANCYLKLNRKAEARQTL 658


>gi|149919990|ref|ZP_01908465.1| phosphoglyceromutase [Plesiocystis pacifica SIR-1]
 gi|149819263|gb|EDM78697.1| phosphoglyceromutase [Plesiocystis pacifica SIR-1]
          Length = 565

 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/142 (14%), Positives = 42/142 (29%), Gaps = 23/142 (16%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA-----FVQYSA 107
           ++   R++Y             +A    +   +D+     A + LL+       F     
Sbjct: 442 ELERCRDLYADGETRF------RAARCLSDFMKDYGREPEAVEGLLLLGTLRMDFAH--- 492

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
             YQ A    EE++ + P     +   Y + ++          D       +      + 
Sbjct: 493 -DYQSATRNIEEFLRRAPSHPKAELARYQLVLA--------AIDAGYIDRAISRSRHYLS 543

Query: 168 RYTNSPYVKGARFYVTVGRNQL 189
            Y +  YV          ++ L
Sbjct: 544 LYPDGQYVGRILQRFPELKSAL 565


>gi|237739469|ref|ZP_04569950.1| tetratricopeptide repeat family protein [Fusobacterium sp. 2_1_31]
 gi|229423077|gb|EEO38124.1| tetratricopeptide repeat family protein [Fusobacterium sp. 2_1_31]
          Length = 936

 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 48/134 (35%), Gaps = 13/134 (9%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           +  YQR ++     FL + N   A + +     + +      +++++    V Y+   Y 
Sbjct: 123 EKTYQRALFAVGQDFLSKDNNEAAKDIYREIIDKKY---ENDKEAMMGLGIVNYNLKDYD 179

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           +A     E+    P+ +N D V YL   +  +           T+  +     +      
Sbjct: 180 KAIYWFSEFQKSKPK-ENKDMVSYLKASALYRK--------GNTEQAIVDFEELANANPA 230

Query: 172 SPYVKGARFYVTVG 185
           + Y K A  Y+   
Sbjct: 231 NDYSKKAILYLIEI 244



 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 45/246 (18%), Positives = 85/246 (34%), Gaps = 31/246 (12%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
             S  +  L+  ++    + YL SV+D       Y K V  +  + + +A  +F +   +
Sbjct: 476 IISSLMSSLLDQQKYDEMNQYLSSVSDDNSLS--YLKGVAAMGLKKYDEAETHFQKVLAN 533

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI-TQYPESKNVDYVYYL--VGMSYAQ 143
                ++ K  L      + A +Y +A   GE+Y+    P+ +   Y   L  +G+SY +
Sbjct: 534 GDKG-LSTKVYLNRVRNFFLAERYNEAIQAGEQYLSRINPDKEKAIYSEMLDKIGLSYFR 592

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
           + +   YDQ                   S Y K A         +      +I   Y   
Sbjct: 593 VGK---YDQAR-----------------SYYSKIASMKGYEVYGK-----FQIADSYYNE 627

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
             Y  A   ++ +  NY +  + E+A  + +     L   +      +     YP     
Sbjct: 628 KNYAKAGELYKSIYNNYGETFYGEQAYYKYITTLSLLGNTEAFEREKNNFLSVYPNSTLR 687

Query: 264 RYVETL 269
             +  L
Sbjct: 688 TTISNL 693


>gi|328953891|ref|YP_004371225.1| hypothetical protein Desac_2216 [Desulfobacca acetoxidans DSM
           11109]
 gi|328454215|gb|AEB10044.1| hypothetical protein Desac_2216 [Desulfobacca acetoxidans DSM
           11109]
          Length = 315

 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 42/120 (35%), Gaps = 8/120 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           + + +   K++++  A E F +   + P    A ++    A   Y    + +A     + 
Sbjct: 189 FAEGLTLYKQKSYGPAREKFQRYLEEHPKGEKAIEARYYLADSLYQEKHHDEAIVEFNKL 248

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +  YP+S            +           Q  +K+    + +++  Y  SP    AR 
Sbjct: 249 LEGYPKSTLAP--------ASLLKQAYAFKAQGKSKVHNLILEKLIADYPQSPEAVQARK 300



 Score = 42.8 bits (100), Expect = 0.058,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 39/119 (32%), Gaps = 14/119 (11%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           Q++     +   R +E +        AR+Y+    + L            +   +  AI 
Sbjct: 198 QKSYGPAREKFQRYLEEHPKGEKAIEARYYLA---DSL-----------YQEKHHDEAIV 243

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
            F  +L  Y  +  A  ++ +   A+ A         ++  +   YPQ   A     L 
Sbjct: 244 EFNKLLEGYPKSTLAPASLLKQAYAFKAQGKSKVHNLILEKLIADYPQSPEAVQARKLR 302



 Score = 40.9 bits (95), Expect = 0.17,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 36/88 (40%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
               +     Y  A    +E++  +A   FN+    +P + +A  SLL  A+   + GK 
Sbjct: 216 PKGEKAIEARYYLADSLYQEKHHDEAIVEFNKLLEGYPKSTLAPASLLKQAYAFKAQGKS 275

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVG 138
           +    + E+ I  YP+S        L G
Sbjct: 276 KVHNLILEKLIADYPQSPEAVQARKLRG 303


>gi|110679378|ref|YP_682385.1| hypothetical protein RD1_2099 [Roseobacter denitrificans OCh 114]
 gi|109455494|gb|ABG31699.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
          Length = 281

 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 35/85 (41%), Gaps = 2/85 (2%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY-QQAAS 115
           + + ++KA   L + N+  A + F   S ++P   +A  + L         G+  + A +
Sbjct: 158 EEDDFKKAQAALAQGNYQSAADQFAAFSMNYPGGPLAAGADLGRGEALEGLGRTREAARA 217

Query: 116 LGEEYITQYPESKNVDYVYYLVGMS 140
             + + +  P  +      + +G S
Sbjct: 218 YLDSF-SAEPTGQVAPQALFRLGRS 241


>gi|196228294|ref|ZP_03127161.1| hypothetical protein CfE428DRAFT_0325 [Chthoniobacter flavus
           Ellin428]
 gi|196227697|gb|EDY22200.1| hypothetical protein CfE428DRAFT_0325 [Chthoniobacter flavus
           Ellin428]
          Length = 812

 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 63/202 (31%), Gaps = 21/202 (10%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           ++ A+  L  +N+   ++ +   S   P + +    LL   F Q  AG    A    E Y
Sbjct: 417 FDAALSALNRRNYESFFKDYRDLSNLAPNSALRSDLLLEEGFAQARAGD-PHAGDTIELY 475

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +  +P+ +  +     V ++                   +Y+  +     ++        
Sbjct: 476 LHNFPKHRRQNEAQ--VALAELAFADGDKLG------AGRYLQVVDSSSPDT----DTAA 523

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
                   LA  E                I R +  L ++  + +  E   +L + Y + 
Sbjct: 524 RAACLAVFLADAE--------TPPNPAKVIERARKFLHDFPRSAYLPEVRMKLGQTYFST 575

Query: 241 ALMDEAREVVSLIQERYPQGYW 262
                A    +LI    P G +
Sbjct: 576 GDHANAETQFTLIARENPNGPY 597


>gi|302036000|ref|YP_003796322.1| hypothetical protein NIDE0624 [Candidatus Nitrospira defluvii]
 gi|300604064|emb|CBK40396.1| protein of unknown function, containing TPR repeats [Candidatus
           Nitrospira defluvii]
          Length = 399

 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 64/211 (30%), Gaps = 47/211 (22%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF-----VQYSAG-KYQQAA 114
           YE+ V   +E N   A E   +     P         L  A+     V + +     +A 
Sbjct: 84  YERGVTLFREGNADGAIEALKKALVQNP--------KLAEAYHVLGLVYFQSKRNPDEAI 135

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
              ++ +   P S  +              + DV   Q         + + ++    +  
Sbjct: 136 QAYKQSLKLGPASAEI-----------LNDLADVYLAQGRGSDAEGVLRQALDIAPGNEE 184

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
                              +++ R Y  R +   A+  +Q +L    D     EA+  L 
Sbjct: 185 A-----------------HLDLARLYEARHDRANALKMYQSLLRVRPD---HAEALYHLA 224

Query: 235 EAYVALALMDEAREVVSLIQERYPQ--GYWA 263
             Y +   +  ARE +S + +  P     W 
Sbjct: 225 SLYDSQGDLKLAREYLSRLTQANPGHADAWY 255


>gi|298368849|ref|ZP_06980167.1| periplasmic protein [Neisseria sp. oral taxon 014 str. F0314]
 gi|298282852|gb|EFI24339.1| periplasmic protein [Neisseria sp. oral taxon 014 str. F0314]
          Length = 225

 Score = 47.8 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 48/138 (34%), Gaps = 11/138 (7%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           +  D           +  +Y++A  + +  N++ A             + ++RK++ +  
Sbjct: 91  AKNDAAQTVADTDANETRLYDQAFKYYRSGNYTAAAAVLKGADGGN-GSEISRKNMYLLL 149

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQ 160
             Q   G  +   ++G  Y  ++  +       Y +G    +   +D+  D         
Sbjct: 150 QSQQRLGNCESVINIGGRYANRFRNTAQAPDAMYSIGQCQYKLQQKDIARD--------- 200

Query: 161 YMSRIVERYTNSPYVKGA 178
              +++  Y +S   K A
Sbjct: 201 TWRKLIHTYPDSEAAKRA 218



 Score = 38.9 bits (90), Expect = 0.66,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 20/57 (35%), Gaps = 7/57 (12%)

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
             RF+       +   A +AM  + +    L   D AR+    +   YP    A+  
Sbjct: 169 ANRFR-------NTAQAPDAMYSIGQCQYKLQQKDIARDTWRKLIHTYPDSEAAKRA 218


>gi|297621740|ref|YP_003709877.1| hypothetical protein wcw_1522 [Waddlia chondrophila WSU 86-1044]
 gi|297377041|gb|ADI38871.1| conserved hypothetical protein [Waddlia chondrophila WSU 86-1044]
          Length = 347

 Score = 47.8 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 74/216 (34%), Gaps = 10/216 (4%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRY--QREVYEKAVLFLKEQNF--------SKAY 77
           F +A C   G+    S   +     + ++    +  + A    +   F          A 
Sbjct: 93  FDLANCAFNGYLSSQSNPRFFHEAVEYKFTIAEQFRKGARRHYRGSRFFPKWANGQDLAL 152

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           E +++     P   +   +L   A + +  G+++ + S  +  I ++P+++     Y  +
Sbjct: 153 EIYDEVIASMPGDELTIHALYSKACLLWHMGEFRDSVSAFQTIIRRFPKNELAPDSYMRI 212

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
              Y    +    +          + R    +     +  AR      +   A+   EI 
Sbjct: 213 MKVYIDQAKREKQNPDLIAFAQMNLKRFEADFPRDAGLDVARADYLRLKEMYASALYEIA 272

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
            +Y +  +  AA+  +Q     + +   A  + +RL
Sbjct: 273 VFYERISQPRAAVIYYQKASLEFPETVIAGRSRSRL 308



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/196 (10%), Positives = 52/196 (26%), Gaps = 47/196 (23%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           ++     T      + +E  +      + + A ++ +  S +FP     + +        
Sbjct: 28  ELTRKEDTPYLSAADHFELGMNAFHHGDMTLAVKHLHIVSHNFPNTSYGQDAFFYLGMSY 87

Query: 105 YSAGKYQQAASLGEEYI--TQYPE--SKNVDYV-----YYLVGM---------------- 139
           Y   ++  A      Y+     P    + V+Y       +  G                 
Sbjct: 88  YKLCEFDLANCAFNGYLSSQSNPRFFHEAVEYKFTIAEQFRKGARRHYRGSRFFPKWANG 147

Query: 140 ------SYAQMIRDVPYDQ----------------RATKLMLQYMSRIVERYTNSPYVKG 177
                  Y ++I  +P D+                   +  +     I+ R+  +     
Sbjct: 148 QDLALEIYDEVIASMPGDELTIHALYSKACLLWHMGEFRDSVSAFQTIIRRFPKNELAPD 207

Query: 178 ARFYVTVGRNQLAAKE 193
           +   +       A +E
Sbjct: 208 SYMRIMKVYIDQAKRE 223


>gi|198433200|ref|XP_002124360.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
          Length = 1243

 Score = 47.8 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/139 (13%), Positives = 41/139 (29%), Gaps = 31/139 (22%)

Query: 108  GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            G Y  +     + I   PE++     Y+     + +    +        L ++    +V 
Sbjct: 1016 GDYTMSIVNYSQAIKLDPENEET---YFQRAQKFEKTGDML--------LAMEDYGNVVR 1064

Query: 168  RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
                      A                   ++Y K+  + +A+  F  ++       H  
Sbjct: 1065 LNPT---RTDALLRR--------------AKFYFKKKSWHSAVNDFTQLIEKEPLNSH-- 1105

Query: 228  EAMARLVEAYVALALMDEA 246
             A +    AY A+   + A
Sbjct: 1106 -ARSYRGRAYAAMGQSENA 1123


>gi|326523823|dbj|BAJ93082.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 483

 Score = 47.8 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 44/140 (31%), Gaps = 29/140 (20%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCS---RDFPFAGVARKSLLMSAFVQYSA 107
           ++V+   E+  +A    K   FS+A E +         +  +   A ++     F     
Sbjct: 7   SNVQKAEELKLRANDAFKANKFSQAVELYDQAIDLNGSNAVY--WANRA-----FAHTKL 59

Query: 108 GKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
            +Y  A     + I   P+     Y   YY  G +Y  M           K  L+   ++
Sbjct: 60  EEYGSAVQDATKAIEIDPK-----YSKGYYRRGAAYLAM--------GKFKEALKDFQQV 106

Query: 166 VERYTNSPYVKGARFYVTVG 185
                N P    A   +   
Sbjct: 107 KRICPNDP---DATRKLKEC 123


>gi|91093513|ref|XP_969441.1| PREDICTED: similar to tpr repeat nuclear phosphoprotein [Tribolium
           castaneum]
 gi|270002675|gb|EEZ99122.1| hypothetical protein TcasGA2_TC005228 [Tribolium castaneum]
          Length = 1187

 Score = 47.8 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/275 (15%), Positives = 101/275 (36%), Gaps = 33/275 (12%)

Query: 1   MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
           +   L RA    E         ++TI +++A           S  +Y D + +     + 
Sbjct: 473 LEEALTRAKTEAEHDPQYYNSISVTITYNLARLNEALCLFDKSEKLYKDILKERPNYVDC 532

Query: 61  YEK-AVLFLKEQNFSKAYEYF-NQCS--RDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           Y +   +   + +  +A ++F        + P    +    L  A  ++  G+ +     
Sbjct: 533 YLRLGCMARDKGHIYEASDWFKEALRFNTEHP-DAWSLLGNLHLAKAEWGPGQKK----- 586

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMI----RDVPYDQRATKLMLQYMSRIVERYTNS 172
            E  I + P +    Y   ++G  + Q +    +D   ++R  +  L    ++++    +
Sbjct: 587 YER-ILKNPATSQDSYSLIVLGNVWLQTLHQPTKDKEREKRHQERALSMFKQVLKIDPKN 645

Query: 173 PYVKGA-------RFYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQL 215
            +           +  V   R+  A  +E         + I   Y+++ ++V+AI  ++ 
Sbjct: 646 IWAANGIGAVLAHKGAVNEARDIFAQVREATADFCDVWLNIAHVYVEQKQFVSAIQMYEN 705

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
            L  +    +  E +  L  AY   + + EA+ V+
Sbjct: 706 CLRKFFKYNNV-EVLQYLARAYYKASKLKEAKMVL 739


>gi|42528096|ref|NP_973194.1| hypothetical protein TDE2596 [Treponema denticola ATCC 35405]
 gi|41819141|gb|AAS13113.1| hypothetical protein TDE_2596 [Treponema denticola ATCC 35405]
 gi|325474690|gb|EGC77876.1| hypothetical protein HMPREF9353_00723 [Treponema denticola F0402]
          Length = 320

 Score = 47.8 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/136 (16%), Positives = 53/136 (38%), Gaps = 8/136 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
            V+       +Y   +     +N++ A        + FP +  A + +     +   + K
Sbjct: 49  EVSKNSLDEPLYWLIMANASARNYTVALNDIETFLKRFPNSSKAAEVIYQQGRICCLSAK 108

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           + Q+ ++   ++ +YP  +     YY +G +   + R         K      SR++  Y
Sbjct: 109 HDQSINILYGFLRKYPNHRQTASAYYWIGENLYMVGR--------LKDARTIFSRVIIDY 160

Query: 170 TNSPYVKGARFYVTVG 185
            +S  V+ +R+ + + 
Sbjct: 161 PSSAKVEPSRYKIALI 176


>gi|317014666|gb|ADU82102.1| flagellar functional protein [Helicobacter pylori Gambia94/24]
          Length = 803

 Score = 47.8 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 50/137 (36%), Gaps = 9/137 (6%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             +T   Y    Y +A   +  Q +  A    ++  +++P     +   L+        G
Sbjct: 188 PLLTTKGYDLNAYLEAKKQMDSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIALGKLG 247

Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            K      +G ++I  YP   N+    Y V  +  +            K  ++Y  RI+ 
Sbjct: 248 IKKPLLIDIGTQWIKNYPTDPNIPEALYYVAKALDEN--------NNYKQAVRYYKRILL 299

Query: 168 RYTNSPYVKGARFYVTV 184
            Y NS Y   A+ ++ +
Sbjct: 300 EYKNSRYAPLAQMHLAI 316



 Score = 42.4 bits (99), Expect = 0.065,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 31/99 (31%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
             + RA   +    ++   + L I     +                +  TD      +Y 
Sbjct: 217 RTISRAFKNYPQTIFKKDLYLLEIIALGKLGIKKPLLIDIGTQWIKNYPTDPNIPEALYY 276

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
            A    +  N+ +A  Y+ +   ++  +  A  + +  A
Sbjct: 277 VAKALDENNNYKQAVRYYKRILLEYKNSRYAPLAQMHLA 315



 Score = 36.6 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 16/47 (34%)

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
           + NY    +  EA+  + +A        +A      I   Y    +A
Sbjct: 261 IKNYPTDPNIPEALYYVAKALDENNNYKQAVRYYKRILLEYKNSRYA 307


>gi|300871725|ref|YP_003786598.1| putative cAMP-binding protein [Brachyspira pilosicoli 95/1000]
 gi|300689426|gb|ADK32097.1| putative cAMP binding protein [Brachyspira pilosicoli 95/1000]
          Length = 335

 Score = 47.8 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 50/128 (39%), Gaps = 13/128 (10%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S+ +     + Y++A+ F +  ++  A + FN   ++     VA  S+       Y   K
Sbjct: 208 SIENSSINNKDYDRALEFYERGDYVNAIKSFNALIKN-EDKDVAENSIFYMGKAYYYINK 266

Query: 110 YQQAASLGEEYITQYPESKNVDYV-YYL-----------VGMSYAQMIRDVPYDQRATKL 157
           Y  A+ +    I  YP+SKNV     YL              +Y Q +  +P     ++ 
Sbjct: 267 YDNASKVLLSAIKTYPKSKNVKEAILYLGKSFASIGDKNKAKAYYQKVMSIPPMDSLSQE 326

Query: 158 MLQYMSRI 165
               + ++
Sbjct: 327 ANDSIQKL 334



 Score = 45.5 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 60/167 (35%), Gaps = 29/167 (17%)

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYL---------VGMSYAQMIRDVPYDQRA 154
            + A KY+ A    + YI     S + D V+Y           G+       ++   +  
Sbjct: 139 YFKAKKYKNALYAYKRYIQ----SADEDSVFYHTVEQRIKECKGLLNITDDSNIAPLEDN 194

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
           T          +    ++     +       R            +Y +RG+YV AI  F 
Sbjct: 195 TTE-----EPTIITKPSTSIENSSINNKDYDRAL---------EFY-ERGDYVNAIKSFN 239

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            ++ N  D + AE ++  + +AY  +   D A +V+    + YP+  
Sbjct: 240 ALIKN-EDKDVAENSIFYMGKAYYYINKYDNASKVLLSAIKTYPKSK 285


>gi|223940440|ref|ZP_03632292.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514]
 gi|223890885|gb|EEF57394.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514]
          Length = 803

 Score = 47.8 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 67/202 (33%), Gaps = 41/202 (20%)

Query: 69  KEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
            + ++ KA EYFN       P    A  + L+     +  GK  +AA    E +   P  
Sbjct: 480 DKGDYQKAIEYFNAALKNKIP--RYAV-TRLLLGNALFDQGKLPEAADQYREALRVEP-- 534

Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS---RIVERYTNSPYVKGARFYVTV 184
            ++    + +G+   ++          T+  + Y +   R+     ++ Y+         
Sbjct: 535 -DLLDANHRLGLVLFKL--------NLTREAISYFNAELRVESDLPDTRYL--------- 576

Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
                      +G  Y K G   AAI  +Q  L    D   A + +  L+          
Sbjct: 577 -----------LGECYKKLGNLTAAIAHYQSALEITPDFIPARQQLGILL---AQQGNTS 622

Query: 245 EAREVVSLIQERYPQGYWARYV 266
           EA+     I E  P    A + 
Sbjct: 623 EAQRHFQRIVELQPTNELAHFS 644


>gi|163796932|ref|ZP_02190888.1| hypothetical protein BAL199_19453 [alpha proteobacterium BAL199]
 gi|159177679|gb|EDP62230.1| hypothetical protein BAL199_19453 [alpha proteobacterium BAL199]
          Length = 318

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 42/114 (36%), Gaps = 10/114 (8%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY-QQAASLGEE 119
           Y+ A  +L + ++  A + F   ++  P   +A  +        Y   +Y + A +  E 
Sbjct: 196 YQAAFDYLVKHDYDSAEQAFRAFTKAHPDDPLAGNAQYWMGETFYVRQRYQEAAVAFLEG 255

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
           Y   YP+S         +GM+  Q                   +R+ + + ++P
Sbjct: 256 YQK-YPKSPKSADNLLKLGMALGQ--------VGQPAEACSAFARLQKEFPDAP 300



 Score = 45.5 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 42/127 (33%), Gaps = 22/127 (17%)

Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
           V Y     Y      V +D  + +   +  +   + + + P    A++++          
Sbjct: 194 VQYQAAFDYL-----VKHDYDSAEQAFRAFT---KAHPDDPLAGNAQYWM---------- 235

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
               G  +  R  Y  A   F      Y  +  + + + +L  A   +    EA    + 
Sbjct: 236 ----GETFYVRQRYQEAAVAFLEGYQKYPKSPKSADNLLKLGMALGQVGQPAEACSAFAR 291

Query: 253 IQERYPQ 259
           +Q+ +P 
Sbjct: 292 LQKEFPD 298



 Score = 42.0 bits (98), Expect = 0.092,   Method: Composition-based stats.
 Identities = 11/90 (12%), Positives = 24/90 (26%), Gaps = 8/90 (8%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           + +    +AF       Y  A      +   +P+        Y +G ++    R      
Sbjct: 191 SIEVQYQAAFDYLVKHDYDSAEQAFRAFTKAHPDDPLAGNAQYWMGETFYVRQR------ 244

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYV 182
              +          ++Y  SP        +
Sbjct: 245 --YQEAAVAFLEGYQKYPKSPKSADNLLKL 272


>gi|126158897|ref|NP_001014372.2| serine/threonine-protein phosphatase 5 [Danio rerio]
 gi|125858767|gb|AAI29288.1| Zgc:110801 [Danio rerio]
          Length = 481

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/144 (15%), Positives = 44/144 (30%), Gaps = 25/144 (17%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQA 113
              ++ EKA  + K++++  A +Y+ +     P      + +SL            Y  A
Sbjct: 9   SAEKLKEKANDYFKDKDYENAIKYYTEALDLNPTNPIYYSNRSL-----SYLRTECYGYA 63

Query: 114 ASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            +     +       + +Y+  YY    S   +           K  L+    +V    N
Sbjct: 64  LADATRALEL-----DKNYLKGYYRRATSNMAL--------GKFKAALKDYETVVRVRPN 110

Query: 172 SPYVKGARFYVTVGRNQLAAKEVE 195
                 A+         +  K  E
Sbjct: 111 DK---DAKMKYQECNKIVKQKAFE 131


>gi|119513238|ref|ZP_01632282.1| TPR repeat protein [Nodularia spumigena CCY9414]
 gi|119462105|gb|EAW43098.1| TPR repeat protein [Nodularia spumigena CCY9414]
          Length = 727

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 48/144 (33%), Gaps = 9/144 (6%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
               D     + Y+      + +++ +A + F+Q     P +    ++ +     +Y+  
Sbjct: 446 KPPEDTLSFADYYKAGHAAYQIRDYDQAVKKFSQAIEQQPTSS---RAYVNRGNARYNLR 502

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
            Y+ A     + +   PE       +   G +   M        R  +L +   ++ +  
Sbjct: 503 DYEGALKDYNQALEINPEEVK---AFVNRGNARYMMAEYSHDPDREYQLAIADFNQALGI 559

Query: 169 YTNSPYVKGARFYVTVGRNQLAAK 192
              +     A     + R+++A  
Sbjct: 560 ---NKQEIEAYIRRGIVRSKMARY 580


>gi|50084561|ref|YP_046071.1| putative signal peptide [Acinetobacter sp. ADP1]
 gi|49530537|emb|CAG68249.1| conserved hypothetical protein; putative signal peptide
           [Acinetobacter sp. ADP1]
          Length = 275

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 42/119 (35%), Gaps = 17/119 (14%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG--EYVAA 209
           Q   K  +  M   ++ + NS Y   A F++                + L      Y  A
Sbjct: 171 QGGAKKAIAPMQNFIKNHPNSIYTGNAYFWL--------------AEFNLATDPVNYTEA 216

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVE-AYVALALMDEAREVVSLIQERYPQGYWARYVE 267
              + +V+  Y  +  A  ++ +L   A         A ++ + + + YPQ    +Y +
Sbjct: 217 KKNYDIVVKRYPTSSKAPRSLYQLYSIAKDVEHNSAVANQLKAKLLKTYPQSEEVKYFK 275



 Score = 40.9 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 52/143 (36%), Gaps = 12/143 (8%)

Query: 39  ERQSSRDVYLDSVTDVRY---QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
            + +S+    D+VT       ++  Y  A+   K+    KA        ++ P +     
Sbjct: 137 AQDNSQPASTDNVTHQDPVELEKAAYTVALDAYKQGGAKKAIAPMQNFIKNHPNSIYTGN 196

Query: 96  SLLMSAFVQYSAG--KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
           +    A    +     Y +A    +  + +YP S       Y +      + +DV +   
Sbjct: 197 AYFWLAEFNLATDPVNYTEAKKNYDIVVKRYPTSSKAPRSLYQL----YSIAKDVEH--- 249

Query: 154 ATKLMLQYMSRIVERYTNSPYVK 176
            + +  Q  +++++ Y  S  VK
Sbjct: 250 NSAVANQLKAKLLKTYPQSEEVK 272



 Score = 40.1 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 39/124 (31%), Gaps = 23/124 (18%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR-DVPYDQRATKLMLQYMS 163
           Y  G  ++A +  + +I  +P S          G +Y  +   ++  D        +   
Sbjct: 169 YKQGGAKKAIAPMQNFIKNHPNSIYT-------GNAYFWLAEFNLATDPVNYTEAKKNYD 221

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ-LVLANYSD 222
            +V+RY  S     + + +             I +         A   + +  +L  Y  
Sbjct: 222 IVVKRYPTSSKAPRSLYQL-----------YSIAK---DVEHNSAVANQLKAKLLKTYPQ 267

Query: 223 AEHA 226
           +E  
Sbjct: 268 SEEV 271



 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 30/63 (47%), Gaps = 3/63 (4%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG--EEYITQYPESKN 129
           N+++A + ++   + +P +  A +SL    +      ++  A +     + +  YP+S+ 
Sbjct: 212 NYTEAKKNYDIVVKRYPTSSKAPRSLYQL-YSIAKDVEHNSAVANQLKAKLLKTYPQSEE 270

Query: 130 VDY 132
           V Y
Sbjct: 271 VKY 273


>gi|160898837|ref|YP_001564419.1| tol-pal system protein YbgF [Delftia acidovorans SPH-1]
 gi|160364421|gb|ABX36034.1| tol-pal system protein YbgF [Delftia acidovorans SPH-1]
          Length = 260

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 48/137 (35%), Gaps = 8/137 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
                  ++  +E A+   +  +F++A   F+     +P +G    +       QY+   
Sbjct: 132 EFAADPAEKRDFEAALAQFRAGSFAEAGTAFSSFLNQWPKSGYVPSARFWLGNAQYANRN 191

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y+ A +     +   P             +S    I +   + + TK   + +  +++ Y
Sbjct: 192 YKDAITNFRALLAAAPMHGRAPEA----ALS----IANCQIEMKDTKGARKTLEDLIKAY 243

Query: 170 TNSPYVKGARFYVTVGR 186
            N+     A+  +   +
Sbjct: 244 PNAEATAAAKNRLASLK 260



 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 46/142 (32%), Gaps = 22/142 (15%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           A K    +A  Q+ AG + +A +    ++ Q+P+S  V    + +G +            
Sbjct: 138 AEKRDFEAALAQFRAGSFAEAGTAFSSFLNQWPKSGYVPSARFWLGNAQYAN-------- 189

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           R  K  +     ++           A   +   +              ++  +   A   
Sbjct: 190 RNYKDAITNFRALLAAAPMHGRAPEAALSIANCQ--------------IEMKDTKGARKT 235

Query: 213 FQLVLANYSDAEHAEEAMARLV 234
            + ++  Y +AE    A  RL 
Sbjct: 236 LEDLIKAYPNAEATAAAKNRLA 257


>gi|91203212|emb|CAJ72851.1| hypothetical protein kustd2106 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 360

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 36/93 (38%), Gaps = 14/93 (15%)

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           A+  Y  GK  ++  L E+ IT  P        ++ +G  Y +        Q   +  ++
Sbjct: 37  AYNLYKLGKLDESLVLLEKVITLNPNHPE---AHFGMGSIYFR--------QEKFQKAVE 85

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
             +++ E   N  YV  A   + +   +L   E
Sbjct: 86  AFTKVTEIKPN--YV-EAYQRLWLAYKKLGMSE 115


>gi|308163061|gb|EFO65424.1| Protein F54C1.5 [Giardia lamblia P15]
          Length = 673

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 8/77 (10%)

Query: 68  LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
           +++Q + +A E         P    A  SLL  AF  YSAG Y+ A +L +E   ++P S
Sbjct: 18  IRDQEWDQAIEILKDQLAQHPGNR-AALSLL--AFCNYSAGNYEDAVNLYQELCQRHPTS 74

Query: 128 KNVDYVYYLVGMSYAQM 144
           +      Y + ++ A++
Sbjct: 75  ER-----YQLALANARL 86


>gi|225872986|ref|YP_002754445.1| tetratricopeptide repeat protein [Acidobacterium capsulatum ATCC
           51196]
 gi|225793617|gb|ACO33707.1| tetratricopeptide repeat protein [Acidobacterium capsulatum ATCC
           51196]
          Length = 782

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 58/191 (30%), Gaps = 34/191 (17%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
            +  L +Q + +A   F Q ++  P      ++        Y+  KY +AA    + +  
Sbjct: 564 GITLLSQQQYGEAVYAFEQVAKMRP--DY-DRAWANIGIAYYNWEKYPEAAQYLAKALAM 620

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
            P+S       Y   +++         +Q      +  + +    +  S         + 
Sbjct: 621 NPDSART---LYWQALTF--------RNQAKVPEAIADLKKAATLFPLS---SDIHRELG 666

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
                           Y ++ EY  A  ++Q V +   +   A      L   Y  L   
Sbjct: 667 FS--------------YYQQHEYKLAEAQYQTVQSINPNDLAAH---YILGIVYSRLGNR 709

Query: 244 DEAREVVSLIQ 254
            EA +   L  
Sbjct: 710 AEAAKQEKLFA 720



 Score = 44.0 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 37/92 (40%), Gaps = 6/92 (6%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           +    R +Y +A+ F  +    +A     + +  FP +    +      F  Y   +Y+ 
Sbjct: 621 NPDSARTLYWQALTFRNQAKVPEAIADLKKAATLFPLSSDIHR---ELGFSYYQQHEYKL 677

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
           A +  +   +  P        +Y++G+ Y+++
Sbjct: 678 AEAQYQTVQSINPNDLA---AHYILGIVYSRL 706


>gi|15834680|ref|NP_296439.1| type III secretion chaperone, putative [Chlamydia muridarum Nigg]
 gi|270284846|ref|ZP_06194240.1| type III secretion chaperone, putative [Chlamydia muridarum Nigg]
 gi|270288874|ref|ZP_06195176.1| type III secretion chaperone, putative [Chlamydia muridarum Weiss]
 gi|301336225|ref|ZP_07224427.1| type III secretion chaperone, putative [Chlamydia muridarum
           MopnTet14]
 gi|8163117|gb|AAF73524.1| type III secretion chaperone, putative [Chlamydia muridarum Nigg]
          Length = 335

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 54/148 (36%), Gaps = 17/148 (11%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D    + +Y KAV+    ++   A +      +  P      K+ +   ++      + +
Sbjct: 141 DPWNPQSLYNKAVILSDMEDEEGAIDLLESTVKRNPL-YW--KAWVKLGYLLSRNKMWDR 197

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A    E  +   P   ++   +Y +G+ Y  + +        T+L L+     ++   NS
Sbjct: 198 ATEAYERVVQLRP---DLSDGHYNLGLCYLTLDK--------TRLALKAFQESLQL--NS 244

Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYY 200
                A FY+ +    L   E+    +Y
Sbjct: 245 EDA-DAHFYIGLAHMDLKQNELAYDAFY 271


>gi|149177139|ref|ZP_01855746.1| hypothetical protein PM8797T_27065 [Planctomyces maris DSM 8797]
 gi|148844031|gb|EDL58387.1| hypothetical protein PM8797T_27065 [Planctomyces maris DSM 8797]
          Length = 1215

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 64/192 (33%), Gaps = 33/192 (17%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS---AGKYQQ---AA 114
           ++ AV  ++   +S+A + F     ++  +  A ++ +M +        +G         
Sbjct: 288 FDAAVQEMEAGKYSQAIQLFEHFLENYNKSDYADEARIMLSESLVEKEISGSTPAWSRGL 347

Query: 115 SLGEEYIT----------QYPESKNVDYVYYLVGM-SYAQMIRDVPYDQRATKLMLQYMS 163
               ++I            YP    VDY    + + +     R    D            
Sbjct: 348 EATNQFIKKHRDDSDFKVLYPT--LVDYGQ-RIALGAVETASRTKERDLLVVS---SNAE 401

Query: 164 RIVERY--TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
           +I+ RY   ++P    A   +  G  + A  E+      L++  +  A+ + +  +    
Sbjct: 402 KILTRYSPPDAP-PADALARIKAGYEK-AEAEI------LRKEVFDVAVNQIEESIKQKK 453

Query: 222 DAEHAEEAMARL 233
             +  E+    L
Sbjct: 454 TLQALEQRRHLL 465


>gi|78356623|ref|YP_388072.1| TPR domain-containing protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78219028|gb|ABB38377.1| TPR domain protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 263

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 45/132 (34%), Gaps = 22/132 (16%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+  V  +  ++             DFP +G+A  +        Y   +Y +A    +E 
Sbjct: 147 YQAGVKAVMNEDVKTGRSILEAFLADFPKSGLAPNASYWLGETYYHEKRYAEAILTFKEV 206

Query: 121 ITQYPESKNVD-------YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
           +  YP+ +          Y Y ++G            D+   +    Y+  +V+ Y+ S 
Sbjct: 207 VRNYPKHEKAAAAMLKTGYAYEMLG------------DKSNARF---YLQTLVDEYSASE 251

Query: 174 YVKGARFYVTVG 185
               AR  +   
Sbjct: 252 PAALARKRLKSL 263



 Score = 43.2 bits (101), Expect = 0.035,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 34/105 (32%), Gaps = 14/105 (13%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              K     +   +  +  S     A +++              G  Y     Y  AI  
Sbjct: 157 EDVKTGRSILEAFLADFPKSGLAPNASYWL--------------GETYYHEKRYAEAILT 202

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           F+ V+ NY   E A  AM +   AY  L     AR  +  + + Y
Sbjct: 203 FKEVVRNYPKHEKAAAAMLKTGYAYEMLGDKSNARFYLQTLVDEY 247



 Score = 41.3 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 29/85 (34%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D           Y     +  E+ +++A   F +  R++P    A  ++L + +     G
Sbjct: 172 DFPKSGLAPNASYWLGETYYHEKRYAEAILTFKEVVRNYPKHEKAAAAMLKTGYAYEMLG 231

Query: 109 KYQQAASLGEEYITQYPESKNVDYV 133
               A    +  + +Y  S+     
Sbjct: 232 DKSNARFYLQTLVDEYSASEPAALA 256


>gi|210617644|ref|ZP_03291675.1| hypothetical protein CLONEX_03899 [Clostridium nexile DSM 1787]
 gi|210149191|gb|EEA80200.1| hypothetical protein CLONEX_03899 [Clostridium nexile DSM 1787]
          Length = 446

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/116 (14%), Positives = 43/116 (37%), Gaps = 9/116 (7%)

Query: 17  YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQR--EVYEKAVLFLKEQNFS 74
           Y    ++ T      +        ++ +  Y +  +++  ++  ++Y  A    + +N+ 
Sbjct: 312 YNQNNYSTTNLIDELLALSTDSLGEAGKAQYDEMTSEIFPKQCDKLYRSARQSYRVENYG 371

Query: 75  KAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
            A E   +    +  +       K+LL+ A      G  ++A       I  +P+S
Sbjct: 372 TAIESLEKVMKMNESYEDG----KALLLLADSYAGNGDTEKATEKYNRVIELFPDS 423


>gi|126733170|ref|ZP_01748917.1| hypothetical protein RCCS2_03424 [Roseobacter sp. CCS2]
 gi|126716036|gb|EBA12900.1| hypothetical protein RCCS2_03424 [Roseobacter sp. CCS2]
          Length = 186

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 39/134 (29%), Gaps = 20/134 (14%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG--VARKSLLMSAFVQYSAGKYQQAASL 116
           +  +    L++     A E+F       P F+     R      A   Y  G    A   
Sbjct: 69  LLRRGKDALEDGQPDVAAEHFTALIDHAPDFSEGYYGR------ASSYYLLGLTGPALDD 122

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
               +T  P          + G++        P D       L+    I+  + NS  V 
Sbjct: 123 IRRALTLNPRHFEA-----MRGLAIIMEELQRPDD------ALELYEMILTMHPNSQDVL 171

Query: 177 GARFYVTVGRNQLA 190
            +   + +    LA
Sbjct: 172 VSVDRLKLQLEGLA 185


>gi|73670079|ref|YP_306094.1| TPR repeat-containing protein [Methanosarcina barkeri str. Fusaro]
 gi|72397241|gb|AAZ71514.1| TPR repeat [Methanosarcina barkeri str. Fusaro]
          Length = 927

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 65/211 (30%), Gaps = 36/211 (17%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y K     +  N+ +A   +N+    +P       +        Y++G Y++A     + 
Sbjct: 190 YNKGSALQELGNYQEAITAYNKAIEIYP--EYKE-AWYKKGLAFYNSGNYEEAVKACNKT 246

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           I   P++  V +     G + +++         + +  +   +  +E    +        
Sbjct: 247 IELDPQNPRV-WAN--KGNALSKL--------NSYEEAITAYNESIELDPQNSVAW---- 291

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
                 N L      +       G Y  AI  +   +          EA++    A   +
Sbjct: 292 ------NGLG---FAVA----SSGNYEEAIKFYNKAIEI---DPQNSEALSNKGFALYNV 335

Query: 241 ALMDEAREVVSLIQERYPQG--YWARYVETL 269
              +EA + +    E  PQ    W      L
Sbjct: 336 GNREEAIKALDKAIEVNPQNAVAWYDKGSIL 366



 Score = 42.8 bits (100), Expect = 0.051,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 67/217 (30%), Gaps = 41/217 (18%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           +        N+ +A   +++     P    A            +   Y++A     + I 
Sbjct: 83  RGDALANSGNYKEAINAYDKAIELDPQNPEAWN---NKGVALSNLSNYEEAIKAYNKAIE 139

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
             P++      +Y  G +  ++ +      +A K  L+     +E               
Sbjct: 140 LDPQNSLF---WYNKGKTLYELGKQEE-STKAYKESLEASENAIELDP------------ 183

Query: 183 TVGRNQLAAKEVEIGRYYLK------RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
              RN LA        +Y K       G Y  AI  +   +  Y +    +EA  +   A
Sbjct: 184 ---RNSLA--------WYNKGSALQELGNYQEAITAYNKAIEIYPE---YKEAWYKKGLA 229

Query: 237 YVALALMDEAREVVSLIQERYPQGY--WARYVETLVK 271
           +      +EA +  +   E  PQ    WA     L K
Sbjct: 230 FYNSGNYEEAVKACNKTIELDPQNPRVWANKGNALSK 266


>gi|89271364|emb|CAJ83503.1| protein phosphatase 5, catalytic subunit [Xenopus (Silurana)
           tropicalis]
          Length = 511

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/162 (12%), Positives = 50/162 (30%), Gaps = 25/162 (15%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
           F++     +    ++       +++  +   E+ E+A  + + +++ +A +Y+ Q     
Sbjct: 11  FTVTGSGNMAEAERAEEAGGEPTISREKTAEELKEQANEYFRVKDYDRAVQYYTQAIGLS 70

Query: 88  PFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQ 143
           P        +SL            Y  A +     I       +  Y+  YY    S   
Sbjct: 71  PDTAIYYGNRSL-----AYLRTECYGYALADASRAIQL-----DAKYIKGYYRRAASNMA 120

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           +           K  L+    +V+   +      A+      
Sbjct: 121 L--------GKLKAALKDYETVVKVRPHDK---DAQMKFQEC 151


>gi|313681408|ref|YP_004059146.1| hypothetical protein [Sulfuricurvum kujiense DSM 16994]
 gi|313154268|gb|ADR32946.1| Tetratricopeptide TPR_1 repeat-containing protein [Sulfuricurvum
           kujiense DSM 16994]
          Length = 785

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 72/201 (35%), Gaps = 26/201 (12%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +       +N+ K  +      +++P      + +L      +  G++++  +L + +
Sbjct: 180 YMEMKKAYAAKNYIKVIDRAENTLKEYPNTVFKNELMLYQIRSYHQLGEFEKVLALSKRF 239

Query: 121 ITQYPESKNVDYVYYLVGMSYAQ--MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           + ++     +  V      +Y++   I D  Y          +  R+ +   +SP+    
Sbjct: 240 LREFSSDPGLAEVLTYTANAYSKIGQITDADY----------FFDRLFDEQGDSPFAPQG 289

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
              +     QL              GE   A   ++  L++ +D   A +A  +L ++ +
Sbjct: 290 ---MIYKAEQLETN-----------GEPKKAAQYYKKALSSTTDVAIASKAAFKLAQSEL 335

Query: 239 ALALMDEAREVVSLIQERYPQ 259
               + +A + V  I    P 
Sbjct: 336 MSGDVQKAAQYVDKIITVNPD 356


>gi|296415257|ref|XP_002837308.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295633169|emb|CAZ81499.1| unnamed protein product [Tuber melanosporum]
          Length = 476

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/129 (13%), Positives = 39/129 (30%), Gaps = 21/129 (16%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASL 116
           E+  K    +  +++  A +++ Q     P      + ++             Y  A   
Sbjct: 10  ELKAKGNAAIASRDWKTAVDFYTQAIELDPNQALFYSNRAQ-----AHIRMEAYGSAIED 64

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
             + I   P S      YY   +S   +++         K  L+    + ++  N     
Sbjct: 65  AAKAIEIDPASVK---AYYRRAISNVALLK--------YKEALKDFRTVCKKAPNDK--- 110

Query: 177 GARFYVTVG 185
            AR  +   
Sbjct: 111 DARLKMNEC 119


>gi|261365081|ref|ZP_05977964.1| putative periplasmic protein [Neisseria mucosa ATCC 25996]
 gi|288566506|gb|EFC88066.1| putative periplasmic protein [Neisseria mucosa ATCC 25996]
          Length = 244

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 44/123 (35%), Gaps = 11/123 (8%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           +  +YE+A  + +  N+  A     +       + +AR+++ +    Q   G  +    +
Sbjct: 125 ETRLYERASKYYRSGNYRAAAAILKEADGGN-GSDIARRNMYLLLQSQQRMGHCESVIEI 183

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
           G  Y  ++  S       + +G    Q   +D+               ++++ Y  S   
Sbjct: 184 GGRYANRFRSSPQAPDALFSIGQCQYQLQQKDIAR---------NTWRKLIQSYPGSEAA 234

Query: 176 KGA 178
           K A
Sbjct: 235 KRA 237



 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 22/62 (35%), Gaps = 7/62 (11%)

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
             RF+        +  A +A+  + +    L   D AR     + + YP    A+     
Sbjct: 188 ANRFRS-------SPQAPDALFSIGQCQYQLQQKDIARNTWRKLIQSYPGSEAAKRAAIS 240

Query: 270 VK 271
           +K
Sbjct: 241 IK 242


>gi|257458356|ref|ZP_05623504.1| TPR domain protein [Treponema vincentii ATCC 35580]
 gi|257444291|gb|EEV19386.1| TPR domain protein [Treponema vincentii ATCC 35580]
          Length = 664

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 60/159 (37%), Gaps = 30/159 (18%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM-SAFVQYSAGKYQQAAS 115
             +++E+       +N+  A E + Q  ++ P    A  ++    A   Y+ G+Y QA  
Sbjct: 22  PIQLFEEGKELQYHENWYGAIELYQQALKENP----AYNAVYRGLAECFYALGEYDQAIV 77

Query: 116 LGEEYITQYPESKNVD--YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
             E      P+  +++  Y + L+G+                +   +  S I+ RY N+ 
Sbjct: 78  YAERARRYSPQDVDIENLYAFILIGI-------------GRIEEAQKIFSGILNRYPNN- 123

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
               ARF +          EV  GR       Y AA+ R
Sbjct: 124 --LDARFGMAEI-------EVTGGRLTNASELYAAALRR 153


>gi|299769711|ref|YP_003731737.1| hypothetical protein AOLE_07365 [Acinetobacter sp. DR1]
 gi|298699799|gb|ADI90364.1| hypothetical protein AOLE_07365 [Acinetobacter sp. DR1]
          Length = 287

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 41/120 (34%), Gaps = 17/120 (14%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG--EYVAA 209
           Q   K  +  M   ++ + NS Y   A F++                + L      Y  A
Sbjct: 182 QGGAKKAIAPMQNFIKNHPNSVYTGNAYFWL--------------AEFNLATDPVNYNEA 227

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVE-AYVALALMDEAREVVSLIQERYPQGYWARYVET 268
              + +V   Y ++  A  A+ +L   A         A +  + I  +YP+   A++   
Sbjct: 228 KKNYNVVATRYPNSSKAPRALYQLYSIAKDVDKNPASANQYKTKILSQYPKSEEAKFFNK 287



 Score = 42.4 bits (99), Expect = 0.063,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 46/124 (37%), Gaps = 23/124 (18%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR-DVPYDQRATKLMLQYMS 163
           Y  G  ++A +  + +I  +P S     VY   G +Y  +   ++  D        +  +
Sbjct: 180 YKQGGAKKAIAPMQNFIKNHPNS-----VY--TGNAYFWLAEFNLATDPVNYNEAKKNYN 232

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL-VLANYSD 222
            +  RY NS     A + +             I +      +  A+  +++  +L+ Y  
Sbjct: 233 VVATRYPNSSKAPRALYQL-----------YSIAK---DVDKNPASANQYKTKILSQYPK 278

Query: 223 AEHA 226
           +E A
Sbjct: 279 SEEA 282



 Score = 42.4 bits (99), Expect = 0.073,   Method: Composition-based stats.
 Identities = 23/138 (16%), Positives = 48/138 (34%), Gaps = 9/138 (6%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
           ++S+    +    +  ++  Y  A+   K+    KA        ++ P +     +    
Sbjct: 153 EASQPPSQNQSNPIELEKAAYTVALDAYKQGGAKKAIAPMQNFIKNHPNSVYTGNAYFWL 212

Query: 101 AFVQYSAG--KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
           A    +     Y +A        T+YP S       Y +      + +DV  +  +    
Sbjct: 213 AEFNLATDPVNYNEAKKNYNVVATRYPNSSKAPRALYQL----YSIAKDVDKNPAS---A 265

Query: 159 LQYMSRIVERYTNSPYVK 176
            QY ++I+ +Y  S   K
Sbjct: 266 NQYKTKILSQYPKSEEAK 283


>gi|77919112|ref|YP_356927.1| N-acetylmuramoyl-L-alanine amidase [Pelobacter carbinolicus DSM
           2380]
 gi|77545195|gb|ABA88757.1| N-acetylmuramoyl-L-alanine amidase [Pelobacter carbinolicus DSM
           2380]
          Length = 577

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 35/98 (35%), Gaps = 14/98 (14%)

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
           YP     D   Y+ G + ++ +  +   +   +  L++  R+ ++Y  S     A     
Sbjct: 68  YPRHGRADDALYMGGKA-SEGLYAISRRKGDARQALEFYDRLAKKYPTSNLADDA----C 122

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
               ++    ++      +   YV    R++  +  + 
Sbjct: 123 YLAGRILEHNLD-----NRSEAYV----RYKQGVDKHP 151



 Score = 42.0 bits (98), Expect = 0.093,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 45/128 (35%), Gaps = 10/128 (7%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           ++ ++ L IF  +           +    +   V      R++   +   L  +N+ +  
Sbjct: 2   KVLRYFLAIFLILLPVLPAFAAADAGERAF---VHAKAEYRQLQNSSKGKLYRENWEQVI 58

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFV---QY----SAGKYQQAASLGEEYITQYPESKNV 130
           + F + +  +P  G A  +L M        Y      G  +QA    +    +YP S   
Sbjct: 59  QGFKKVAESYPRHGRADDALYMGGKASEGLYAISRRKGDARQALEFYDRLAKKYPTSNLA 118

Query: 131 DYVYYLVG 138
           D   YL G
Sbjct: 119 DDACYLAG 126


>gi|322378669|ref|ZP_08053102.1| paralysed flagella protein [Helicobacter suis HS1]
 gi|321148886|gb|EFX43353.1| paralysed flagella protein [Helicobacter suis HS1]
          Length = 765

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 38/124 (30%), Gaps = 9/124 (7%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ-YSAGKYQQAASLGEE 119
           Y      +    + +A E      + +P     +           +   K      +  +
Sbjct: 165 YLNTKRLIDNGYYMEALESIVNILKLYPDTLFRKDLYFYEITALSHLKKKQDLVIQVASQ 224

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           +I  YP    V  V Y +G +Y   I  +P              RI+E Y  S Y   ++
Sbjct: 225 WIKLYPSDPQVPSVLYALGNAY-SQINYMP-------QAASTFKRIIEEYPKSRYSPLSQ 276

Query: 180 FYVT 183
             + 
Sbjct: 277 MRLA 280



 Score = 39.7 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 37/113 (32%), Gaps = 13/113 (11%)

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
           D       L+ +  I++ Y ++ + K   FY     + L  K+  +             I
Sbjct: 173 DNGYYMEALESIVNILKLYPDTLFRKDLYFYEITALSHLKKKQDLV-------------I 219

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
                 +  Y         +  L  AY  +  M +A      I E YP+  ++
Sbjct: 220 QVASQWIKLYPSDPQVPSVLYALGNAYSQINYMPQAASTFKRIIEEYPKSRYS 272


>gi|15645888|ref|NP_208066.1| paralysed flagella protein (pflA) [Helicobacter pylori 26695]
 gi|2314439|gb|AAD08318.1| paralysed flagella protein (pflA) [Helicobacter pylori 26695]
          Length = 801

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 49/137 (35%), Gaps = 9/137 (6%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             +T   Y    Y +A   +  Q +  A    ++  +++P     +   L+        G
Sbjct: 186 PLLTTKGYDLNAYLEAKKQMDSQAYFDALRTISRAFKNYPQTMFKKDLYLLEIIALGQLG 245

Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            K      +G ++I  YP   N+    Y V  +  +            K  ++Y  RI+ 
Sbjct: 246 IKKSLLIDIGTQWIKNYPTDPNIPEALYYVAKALDEN--------NHYKQAMRYYKRILL 297

Query: 168 RYTNSPYVKGARFYVTV 184
            Y NS Y   A+  + +
Sbjct: 298 EYKNSRYAPLAQMRLAI 314



 Score = 40.9 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 12/99 (12%), Positives = 31/99 (31%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
             + RA   +    ++   + L I     +                +  TD      +Y 
Sbjct: 215 RTISRAFKNYPQTMFKKDLYLLEIIALGQLGIKKSLLIDIGTQWIKNYPTDPNIPEALYY 274

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
            A    +  ++ +A  Y+ +   ++  +  A  + +  A
Sbjct: 275 VAKALDENNHYKQAMRYYKRILLEYKNSRYAPLAQMRLA 313



 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 37/113 (32%), Gaps = 13/113 (11%)

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
           D +A    L+ +SR  + Y  + + K            +A  ++ I +  L        I
Sbjct: 206 DSQAYFDALRTISRAFKNYPQTMFKKD-----LYLLEIIALGQLGIKKSLL--------I 252

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
                 + NY    +  EA+  + +A        +A      I   Y    +A
Sbjct: 253 DIGTQWIKNYPTDPNIPEALYYVAKALDENNHYKQAMRYYKRILLEYKNSRYA 305


>gi|325192791|emb|CCA27195.1| serine/threonineprotein phosphatase 5 putative [Albugo laibachii
           Nc14]
          Length = 493

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 43/164 (26%), Gaps = 36/164 (21%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA-GVARKSLLMSAFVQYSAG 108
           S    R    +  +    L+E  +  A E +      +P A   A ++            
Sbjct: 13  SEESKREADSLKNEGNQSLQEYKYRNAVELYTAAIEIYPTAIYYANRAA-----AHMKTE 67

Query: 109 KYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
            Y  A       I   P      Y   YY  G                 K  L+    +V
Sbjct: 68  SYGLAIKDATNAIGMDPN-----YVKAYYRRG--------SAELALGHYKAALKNFRLVV 114

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
           +          AR    +  ++L           +K   + AAI
Sbjct: 115 QMKPQDK---DARMKYKLC-DKL-----------VKEAAFAAAI 143


>gi|183598190|ref|ZP_02959683.1| hypothetical protein PROSTU_01568 [Providencia stuartii ATCC 25827]
 gi|188020356|gb|EDU58396.1| hypothetical protein PROSTU_01568 [Providencia stuartii ATCC 25827]
          Length = 255

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 41/112 (36%), Gaps = 14/112 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             +  +   ++ Y  S Y   A +++                 Y K  +  AA   F  V
Sbjct: 153 EAIGALQSFIKSYPKSSYQSNANYWLGQLN-------------YNKGSKDDAAFY-FATV 198

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           +  Y  ++ + EA+ ++          D+A+ V   + ++YP    A+  E 
Sbjct: 199 VKEYPKSQKSSEALYKVGLIMQDKGQKDKAKAVYQQVLKQYPNSAGAKLAEK 250



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 47/130 (36%), Gaps = 12/130 (9%)

Query: 57  QREVYEKAVL-FLKEQ---NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           ++E Y  AV   +K +      +A        + +P +     +      + Y+ G    
Sbjct: 131 EKEDYNAAVALAMKSKSKAQIDEAIGALQSFIKSYPKSSYQSNANYWLGQLNYNKGSKDD 190

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           AA      + +YP+S+      Y VG+        +  D+           +++++Y NS
Sbjct: 191 AAFYFATVVKEYPKSQKSSEALYKVGL--------IMQDKGQKDKAKAVYQQVLKQYPNS 242

Query: 173 PYVKGARFYV 182
              K A   +
Sbjct: 243 AGAKLAEKKL 252


>gi|212535628|ref|XP_002147970.1| serine/threonine protein phosphatase PPT1 [Penicillium marneffei
           ATCC 18224]
 gi|210070369|gb|EEA24459.1| serine/threonine protein phosphatase PPT1 [Penicillium marneffei
           ATCC 18224]
          Length = 478

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/143 (10%), Positives = 45/143 (31%), Gaps = 27/143 (18%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDF---PFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           K      + ++  A +++ Q    +   P +  + ++             Y  A +   +
Sbjct: 15  KGNAAFAKHDWPTAIDFYTQAIDQYDKEP-SFFSNRAQ-----AHIKMEAYGYAIADATK 68

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +   P +      Y+   ++   ++          +  L+    +++R  N+     A+
Sbjct: 69  ALELDPTNVK---AYWRRALANTAILN--------PRAALKDFKSVIKREPNNQ---TAK 114

Query: 180 FYVTVG----RNQLAAKEVEIGR 198
             +       R     K +E+  
Sbjct: 115 LRLVECEKLVRRMDFEKAIEVAE 137


>gi|331092380|ref|ZP_08341206.1| hypothetical protein HMPREF9477_01849 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330401404|gb|EGG80990.1| hypothetical protein HMPREF9477_01849 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 449

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 28/77 (36%), Gaps = 7/77 (9%)

Query: 61  YEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           Y  A+   + +N++ A             +       K+LL  A     AGK +QA +  
Sbjct: 359 YRLAIRNYEVKNYTTAVTALEFVTSIDEKYEDG----KALLNLAKAYEKAGKTEQAKTTY 414

Query: 118 EEYITQYPESKNVDYVY 134
           +     YP+S+      
Sbjct: 415 KRVAELYPDSELASQAQ 431


>gi|328948172|ref|YP_004365509.1| hypothetical protein Tresu_1304 [Treponema succinifaciens DSM 2489]
 gi|328448496|gb|AEB14212.1| hypothetical protein Tresu_1304 [Treponema succinifaciens DSM 2489]
          Length = 497

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 39/106 (36%), Gaps = 18/106 (16%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
           LL +A   +++ KY+ + +  E +  +      +D   +L        I +    +R  K
Sbjct: 408 LLKAAQEYFNSKKYKDSLACLESFFEK--TDSRIDEGLFLQA-----QIFESNSSERNIK 460

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
             L     I+ RY  SP  K A   VT  +           ++Y  
Sbjct: 461 SALDNYETIIRRYPQSPIWKKASERVTYLK-----------KFYFN 495


>gi|326795241|ref|YP_004313061.1| tol-pal system protein YbgF [Marinomonas mediterranea MMB-1]
 gi|326546005|gb|ADZ91225.1| tol-pal system protein YbgF [Marinomonas mediterranea MMB-1]
          Length = 270

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 47/128 (36%), Gaps = 22/128 (17%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
              K+++AA   ++++  YP +      +Y +G        ++       +  L   + +
Sbjct: 161 REKKFEEAAQAFDDFVLVYPSNTLTGNAHYWLG--------ELKLVLGKPEEALNEFNMV 212

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           V ++ N   V  A + + +  +QL  KE               A    Q V++ +S    
Sbjct: 213 VTQFPNHSKVADATYKLGIVNDQLGNKE--------------EAKQFLQKVVSQFSGTNS 258

Query: 226 AEEAMARL 233
           A  A   L
Sbjct: 259 ATLAAGYL 266



 Score = 42.8 bits (100), Expect = 0.057,   Method: Composition-based stats.
 Identities = 14/105 (13%), Positives = 37/105 (35%), Gaps = 14/105 (13%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           +  +   Q     V  Y ++     A +++   +  L              G+   A+  
Sbjct: 163 KKFEEAAQAFDDFVLVYPSNTLTGNAHYWLGELKLVL--------------GKPEEALNE 208

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           F +V+  + +     +A  +L      L   +EA++ +  +  ++
Sbjct: 209 FNMVVTQFPNHSKVADATYKLGIVNDQLGNKEEAKQFLQKVVSQF 253



 Score = 36.2 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 43/103 (41%), Gaps = 8/103 (7%)

Query: 67  FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
            ++E+ F +A + F+     +P   +   +      ++   GK ++A +     +TQ+P 
Sbjct: 159 LIREKKFEEAAQAFDDFVLVYPSNTLTGNAHYWLGELKLVLGKPEEALNEFNMVVTQFPN 218

Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
              V    Y +G+   Q+           +   Q++ ++V ++
Sbjct: 219 HSKVADATYKLGIVNDQL--------GNKEEAKQFLQKVVSQF 253


>gi|268326188|emb|CBH39776.1| hypothetical secreted protein, containing tetratricopeptide repeats
           [uncultured archaeon]
          Length = 476

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 35/115 (30%), Gaps = 8/115 (6%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           +++  +      +  N+  A   FN+     P                 + G    A   
Sbjct: 30  EQQYIDLGKAEYQGANYDAAIYLFNKAVDLNPDNEYLYN---DLGLCYVALGDMDLAIPE 86

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
             + I     + +    YY  G++Y +  +    D       +   S+++E   N
Sbjct: 87  FSKAIEL---NSDCVEAYYNRGLAYFEQGKQNRTDPND--KAIAEFSKVIELDPN 136


>gi|39996532|ref|NP_952483.1| TPR domain protein [Geobacter sulfurreducens PCA]
 gi|39983413|gb|AAR34806.1| TPR domain protein [Geobacter sulfurreducens PCA]
 gi|298505548|gb|ADI84271.1| TPR domain protein [Geobacter sulfurreducens KN400]
          Length = 573

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 72/240 (30%), Gaps = 37/240 (15%)

Query: 23  ALTIFFSIAVCFLVGWERQ-SSRDVYLDSVTDVRYQREVY--EKAVLFLKEQNFSKAYEY 79
            LT+F  I  C   G        +       D+   R +Y   +A L L E +   A   
Sbjct: 9   LLTLFLVIPGCATSGAVGALPVNEASFKPTVDIAGSRALYIFARARLQLLEGDVDGALTL 68

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
            N      P +     +    A +    G+ + A    E  I   P  +       L G 
Sbjct: 69  LNGAIEADPGSAYLHTA---VAEIYMKTGRAEDALKACENAIRLDPSYRQ---ARLLAGA 122

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
             A + RD        +  + ++ + +E   +                      + +   
Sbjct: 123 ILASLKRD--------RDAVPHLEKAIELDPSREEAY-----------------IHLAVS 157

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           YLK  EY  A+   + ++    ++         L +AY  + L  EA        E  P 
Sbjct: 158 YLKLFEYEKAVNTLKSLVKVKPESSLGY---YYLGKAYDQMKLQKEAANYYKKAIELKPD 214



 Score = 44.0 bits (103), Expect = 0.025,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 65/206 (31%), Gaps = 35/206 (16%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
            +++++ + + +A   F       P    A +     A       +Y +A    EE+   
Sbjct: 291 GLIYMESERYDEAIAEFRDILEREPN---ALQVRFYLATAFEEKEEYDRAL---EEFGRI 344

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN----SPYVKGAR 179
            P S N     Y   + +   I     D    +  +  +   +  Y +      Y+ G  
Sbjct: 345 PPGSFN-----YFEAVGHMAFIH---KDMGNPEKGIAVLKDAIAAYPSHLELHLYLAGLY 396

Query: 180 FYVTVGRNQLA-------------AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
             +      LA                  +G  Y K G    +I R + VL    D    
Sbjct: 397 ESLDHYTEGLAVLKAVEGDFGGDPRLHFRMGTLYDKMGNKDESIARMKKVLTIAPD---D 453

Query: 227 EEAMARLVEAYVALALM-DEAREVVS 251
            +A+  L   Y  L +  DEA + + 
Sbjct: 454 AQALNYLGYTYAELGIKLDEALQYLR 479


>gi|290975181|ref|XP_002670322.1| predicted protein [Naegleria gruberi]
 gi|284083879|gb|EFC37578.1| predicted protein [Naegleria gruberi]
          Length = 3323

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 46/117 (39%), Gaps = 18/117 (15%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D+ ++  ++++  + +++ +  +A +   +     PF     K ++  A   Y    Y+Q
Sbjct: 632 DLFFEEYLFKEIDVNMEQSDCDQAIDLLKKVISFEPFG---VKYIIALADAFYLKTDYKQ 688

Query: 113 AASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
                ++ +        VDY   YY++G  Y           R     +++  + VE
Sbjct: 689 CVKYAKKVLEM-----AVDYWKAYYIIGSCYLAK--------RKVTKAIEFFGQGVE 732


>gi|71909660|ref|YP_287247.1| hypothetical protein Daro_4051 [Dechloromonas aromatica RCB]
 gi|71849281|gb|AAZ48777.1| conserved hypothetical protein [Dechloromonas aromatica RCB]
          Length = 243

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/145 (13%), Positives = 45/145 (31%), Gaps = 8/145 (5%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +          D   + + YE A+   K   + +A   F    + +P + +A  +  
Sbjct: 105 AGDTPNGTVAKPAVDPAKESQDYEAALNQFKAGKYKEAAVGFGAFVQKYPDSSLAPNAQY 164

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
                 Y+    ++A        T+Y ES      +          I     +       
Sbjct: 165 WLGNAWYAQRDCKRAIEAQSLVTTKYAESAKAPDAW--------LAISTCQQEMGNPTGA 216

Query: 159 LQYMSRIVERYTNSPYVKGARFYVT 183
            + +  ++ +Y ++P    AR  + 
Sbjct: 217 KRSLETVIAKYPSAPAADTARERLK 241


>gi|322379672|ref|ZP_08053990.1| paralysed flagella protein [Helicobacter suis HS5]
 gi|321147908|gb|EFX42490.1| paralysed flagella protein [Helicobacter suis HS5]
          Length = 768

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 38/124 (30%), Gaps = 9/124 (7%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ-YSAGKYQQAASLGEE 119
           Y      +    + +A E      + +P     +           +   K      +  +
Sbjct: 168 YLNTKRLIDNGYYMEALESIVNILKLYPDTLFRKDLYFYEITALSHLKKKQDLVIQVASQ 227

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           +I  YP    V  V Y +G +Y   I  +P              RI+E Y  S Y   ++
Sbjct: 228 WIKLYPSDPQVPSVLYALGNAY-SQINYMP-------QAASTFKRIIEEYPKSRYSPLSQ 279

Query: 180 FYVT 183
             + 
Sbjct: 280 MRLA 283



 Score = 39.7 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 37/113 (32%), Gaps = 13/113 (11%)

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
           D       L+ +  I++ Y ++ + K   FY     + L  K+  +             I
Sbjct: 176 DNGYYMEALESIVNILKLYPDTLFRKDLYFYEITALSHLKKKQDLV-------------I 222

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
                 +  Y         +  L  AY  +  M +A      I E YP+  ++
Sbjct: 223 QVASQWIKLYPSDPQVPSVLYALGNAYSQINYMPQAASTFKRIIEEYPKSRYS 275


>gi|68468381|ref|XP_721750.1| potential serine/threonine phosphatase [Candida albicans SC5314]
 gi|46443682|gb|EAL02962.1| potential serine/threonine phosphatase [Candida albicans SC5314]
          Length = 564

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 47/153 (30%), Gaps = 37/153 (24%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +K    LK+  + +A E + +     P      + ++ +           Y  A    + 
Sbjct: 12  DKGNNLLKQHKYDEAIEAYTKAIEIDPNNAIFYSNRAQVQI-----KLENYGLAIQDCDL 66

Query: 120 YITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
            I       ++++   YY  G+S   ++          K  L+    I+++  N      
Sbjct: 67  VIKL-----DINFLKAYYRKGVSLMAILNH--------KQALENFKFILKKLPNDKLTLE 113

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
                    N            YLKR  +  AI
Sbjct: 114 NYK---QCTN------------YLKRQAFEKAI 131


>gi|315185944|gb|EFU19708.1| hypothetical protein SpithDRAFT_1587 [Spirochaeta thermophila DSM
           6578]
          Length = 263

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 61/172 (35%), Gaps = 19/172 (11%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
            R+S     L   +   Y+  +Y+K  L   E ++     +FN     +P +     +L 
Sbjct: 82  ARESLEAFLLKGGSHPLYEEALYQKGRLLYLEGDYQSCISHFNAFLASYPTSQFVPNALY 141

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS------------------ 140
            SA   +S G + +A  L E  +  Y  S   +   Y + +                   
Sbjct: 142 WSAESLFSLGHFTEARPLYEHIVENYRSSPKAEAARYRMELIEYAMREEELLRLLKWSHE 201

Query: 141 -YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
            Y ++  ++   +R+ K  L    + + +  +   V+  +  +     +L+ 
Sbjct: 202 EYLKLAEELNQKERSYKEALSIYQQKLNQVPSLEEVEALKARIKELEAELSR 253



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 48/147 (32%), Gaps = 8/147 (5%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           L S     Y   ++    + L    + +A E             +  ++L     + Y  
Sbjct: 54  LSSADSPVYLEALFWYGKICLTLGEYDEARESLEAFLLKGGSHPLYEEALYQKGRLLYLE 113

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           G YQ   S    ++  YP S+ V    Y    S   +                    IVE
Sbjct: 114 GDYQSCISHFNAFLASYPTSQFVPNALYWSAESLFSL--------GHFTEARPLYEHIVE 165

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEV 194
            Y +SP  + AR+ + +    +  +E+
Sbjct: 166 NYRSSPKAEAARYRMELIEYAMREEEL 192



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 62/179 (34%), Gaps = 26/179 (14%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +LL  AFV   AG+Y QA  +    ++      + D   YL  + +   I     +    
Sbjct: 29  ALLRHAFVLVKAGEYIQAKEVFSRLLS------SADSPVYLEALFWYGKICLTLGEYDEA 82

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           +  L+        +         +  +                     G+Y + I  F  
Sbjct: 83  RESLEAFLLKGGSHPLYEEALYQKGRLLYLE-----------------GDYQSCISHFNA 125

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY---PQGYWARYVETLVK 271
            LA+Y  ++    A+    E+  +L    EAR +   I E Y   P+   ARY   L++
Sbjct: 126 FLASYPTSQFVPNALYWSAESLFSLGHFTEARPLYEHIVENYRSSPKAEAARYRMELIE 184



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 47/139 (33%), Gaps = 24/139 (17%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVG-MSYAQMIRDVPYDQRATKLMLQYMSRIV 166
           G+Y +A    E ++ +       +   Y  G + Y +            +  + + +  +
Sbjct: 77  GEYDEARESLEAFLLKGGSHPLYEEALYQKGRLLYLE---------GDYQSCISHFNAFL 127

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
             Y  S +V  A ++       L              G +  A P ++ ++ NY  +  A
Sbjct: 128 ASYPTSQFVPNALYWSAESLFSL--------------GHFTEARPLYEHIVENYRSSPKA 173

Query: 227 EEAMARLVEAYVALALMDE 245
           E A  R+     A+   + 
Sbjct: 174 EAARYRMELIEYAMREEEL 192


>gi|27366254|ref|NP_761782.1| tetratricopeptide repeat-containing protein [Vibrio vulnificus
           CMCP6]
 gi|37679487|ref|NP_934096.1| hypothetical protein VV1303 [Vibrio vulnificus YJ016]
 gi|320156763|ref|YP_004189142.1| heat shock protein YciM [Vibrio vulnificus MO6-24/O]
 gi|27362455|gb|AAO11309.1| predicted N-acetylglucosaminyl transferase [Vibrio vulnificus
           CMCP6]
 gi|37198231|dbj|BAC94067.1| predicted N-acetylglucosaminyl transferase [Vibrio vulnificus
           YJ016]
 gi|319932075|gb|ADV86939.1| heat shock (predicted periplasmic) protein YciM precursor [Vibrio
           vulnificus MO6-24/O]
          Length = 389

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 59/189 (31%), Gaps = 42/189 (22%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG------ 117
           A  ++      +A + F Q   + P    A    L+  +      ++ +A          
Sbjct: 114 AKDYMVSGFLDRAEKIFEQLVEE-PEHRDAALQQLVLIY--QQTREWDKAIHYAHLLVKT 170

Query: 118 -EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            ++ I      KN+   +Y   ++  +               + +  + ++         
Sbjct: 171 GKKSIR-----KNI--AHYWCELAMLEQADGNKT------KSISHFKKALQEDPKCVRAS 217

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                            + +GR YL+  EY   I   + VL    DA+   EA+  L E 
Sbjct: 218 -----------------ISLGRIYLEMEEYRKTIEYLEHVLE--QDADFVSEALPILAEC 258

Query: 237 YVALALMDE 245
           Y  L   D+
Sbjct: 259 YHHLGQEDQ 267


>gi|262279352|ref|ZP_06057137.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
 gi|262259703|gb|EEY78436.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
          Length = 287

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 41/120 (34%), Gaps = 17/120 (14%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG--EYVAA 209
           Q   K  +  M   ++ + NS Y   A F++                + L      Y  A
Sbjct: 182 QGGAKKAIAPMQNFIKNHPNSVYTGNAYFWL--------------AEFNLATDPVNYNEA 227

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVE-AYVALALMDEAREVVSLIQERYPQGYWARYVET 268
              + +V   Y ++  A  A+ +L   A         A +  + I  +YP+   A++   
Sbjct: 228 KKNYNVVATQYPNSSKAPRALYQLYSIAKDVDKNTASANQYKTKILSQYPKSEEAKFFNK 287



 Score = 43.2 bits (101), Expect = 0.036,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 48/138 (34%), Gaps = 9/138 (6%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
           ++S+    +    V  ++  Y  A+   K+    KA        ++ P +     +    
Sbjct: 153 EASQPPAQNQSNPVELEKAAYTVALDAYKQGGAKKAIAPMQNFIKNHPNSVYTGNAYFWL 212

Query: 101 AFVQYSAG--KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
           A    +     Y +A        TQYP S       Y +      + +DV    + T   
Sbjct: 213 AEFNLATDPVNYNEAKKNYNVVATQYPNSSKAPRALYQL----YSIAKDVD---KNTASA 265

Query: 159 LQYMSRIVERYTNSPYVK 176
            QY ++I+ +Y  S   K
Sbjct: 266 NQYKTKILSQYPKSEEAK 283



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 46/124 (37%), Gaps = 23/124 (18%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR-DVPYDQRATKLMLQYMS 163
           Y  G  ++A +  + +I  +P S     VY   G +Y  +   ++  D        +  +
Sbjct: 180 YKQGGAKKAIAPMQNFIKNHPNS-----VY--TGNAYFWLAEFNLATDPVNYNEAKKNYN 232

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL-VLANYSD 222
            +  +Y NS     A + +             I +      +  A+  +++  +L+ Y  
Sbjct: 233 VVATQYPNSSKAPRALYQL-----------YSIAK---DVDKNTASANQYKTKILSQYPK 278

Query: 223 AEHA 226
           +E A
Sbjct: 279 SEEA 282


>gi|258404280|ref|YP_003197022.1| N-acetylmuramoyl-L-alanine amidase [Desulfohalobium retbaense DSM
           5692]
 gi|257796507|gb|ACV67444.1| N-acetylmuramoyl-L-alanine amidase [Desulfohalobium retbaense DSM
           5692]
          Length = 603

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 43/114 (37%), Gaps = 12/114 (10%)

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
                + +R  N  Y   A +Y+    ++L        R YL R ++  A   +Q V+  
Sbjct: 91  NTFWELYQRNPNGGYAPKALYYLGRVYSELGQ------RSYL-RKDFRQATDYYQRVVTR 143

Query: 220 YSDAEHAEEAMARLVEAY-VALALMDEAREVVSLIQ--ERYPQGYWARYVETLV 270
           +     +++A  R    +   L   ++A   + L+     YP G       +L+
Sbjct: 144 FPRHSWSDDAQLRKARIHLEHLGEKNQA--YLDLLSVVHNYPDGDMYAKARSLL 195



 Score = 43.2 bits (101), Expect = 0.037,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 44/136 (32%), Gaps = 23/136 (16%)

Query: 120 YITQYPESKNVDYV---YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
           +   Y  + N  Y     Y +G  Y+++ +   Y ++  +    Y  R+V R+    +  
Sbjct: 93  FWELYQRNPNGGYAPKALYYLGRVYSELGQR-SYLRKDFRQATDYYQRVVTRFPRHSWSD 151

Query: 177 GARFYVTVGR-NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
            A+          L            K   Y+        V+ NY D +   +A + L  
Sbjct: 152 DAQLRKARIHLEHLGE----------KNQAYLD----LLSVVHNYPDGDMYAKARSLL-- 195

Query: 236 AYVALALMDEAREVVS 251
               L    EA    +
Sbjct: 196 --DQLDRKKEAAPASA 209



 Score = 42.8 bits (100), Expect = 0.053,   Method: Composition-based stats.
 Identities = 17/113 (15%), Positives = 33/113 (29%), Gaps = 14/113 (12%)

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQ-------YSAGKYQQAASLGEEYITQYPESKNVDY 132
           F +  +  P  G A K+L     V        Y    ++QA    +  +T++P     D 
Sbjct: 93  FWELYQRNPNGGYAPKALYYLGRVYSELGQRSYLRKDFRQATDYYQRVVTRFPRHSWSDD 152

Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
                   + + +                +  +V  Y +      AR  +   
Sbjct: 153 AQLRKARIHLEHL-------GEKNQAYLDLLSVVHNYPDGDMYAKARSLLDQL 198



 Score = 38.9 bits (90), Expect = 0.65,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 27/78 (34%), Gaps = 10/78 (12%)

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD-------EAREV 249
            R+   R  ++     F  +     +  +A +A+  L   Y  L           +A + 
Sbjct: 80  ARF---RSSWMQVKNTFWELYQRNPNGGYAPKALYYLGRVYSELGQRSYLRKDFRQATDY 136

Query: 250 VSLIQERYPQGYWARYVE 267
              +  R+P+  W+   +
Sbjct: 137 YQRVVTRFPRHSWSDDAQ 154



 Score = 35.9 bits (82), Expect = 5.7,   Method: Composition-based stats.
 Identities = 10/67 (14%), Positives = 24/67 (35%), Gaps = 7/67 (10%)

Query: 45  DVYLDSVTDVRYQREVY-------EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
           ++Y  +       + +Y       E        ++F +A +Y+ +    FP    +  + 
Sbjct: 95  ELYQRNPNGGYAPKALYYLGRVYSELGQRSYLRKDFRQATDYYQRVVTRFPRHSWSDDAQ 154

Query: 98  LMSAFVQ 104
           L  A + 
Sbjct: 155 LRKARIH 161


>gi|160707933|ref|NP_001104256.1| intraflagellar transport protein 88 homolog [Bos taurus]
          Length = 825

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 75/259 (28%), Gaps = 55/259 (21%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLM 99
           Q+S    L   +D      +  K        ++ KA E++      D         +L  
Sbjct: 469 QASSYADLAVNSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDCSCTE----ALYN 524

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY-------------AQMIR 146
                    +  +A      ++  +   +N   V Y +   Y              Q+I 
Sbjct: 525 IGLTYKKLNRLDEALDC---FLKLHAILRNSAQVLYQIANVYELMEDPSQAMEWLMQLIS 581

Query: 147 DVPYDQRATKL-------------MLQYMSRIVERYT--------------NSPYVKGAR 179
            VP D RA                  QY       +               ++ + + A 
Sbjct: 582 VVPTDSRALSKLGGLYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAI 641

Query: 180 FYVT---VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
            Y     + +      ++ +   + + G Y  A+  ++ +   + +     E +  LV  
Sbjct: 642 QYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRKFPE---NVECLRFLVRL 698

Query: 237 YVALALMDEAREVVSLIQE 255
              + L  E +E  + ++ 
Sbjct: 699 CTDIGLK-EVQEYAAKLKR 716


>gi|301168516|emb|CBW28106.1| conserved hypothetical protein [Bacteriovorax marinus SJ]
          Length = 243

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 75/207 (36%), Gaps = 18/207 (8%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           +    +E+ EKA        + KA   FN+     P    +  +L   A + +  G+  +
Sbjct: 2   ETFNSQELLEKAKHCYNSGEYKKAAAIFNEIIEVEP---KSIDALFYLANIFHINGEIGK 58

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A     + I+  P   +         +S + +  D+ + + A K+  Q   R+  R   +
Sbjct: 59  AIKAFNKVISIDPTHTDA-------AISLSVLYNDIGHYEDAKKVFNQANERVKTRARGN 111

Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
             +            + A K +E+   Y+    +  A+  +  V+A   D E  E  +  
Sbjct: 112 EGIDD-----QHVNKKFAVKHLELADLYMTYNRFDEALFEYNKVVAL--DTESLETRIKI 164

Query: 233 LVEAYVALALMDEAREVVSLIQERYPQ 259
             + Y     + +A + +  ++   P 
Sbjct: 165 -AKVYAKKGFVSKAIDELKRLRTEEPN 190


>gi|208435167|ref|YP_002266833.1| paralysed flagella protein [Helicobacter pylori G27]
 gi|208433096|gb|ACI27967.1| paralysed flagella protein [Helicobacter pylori G27]
          Length = 791

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 49/137 (35%), Gaps = 9/137 (6%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             +T   Y    Y +A   +  Q +  A    ++  +++P     +   L+        G
Sbjct: 176 PLLTTKGYDLNAYLEAKKQMDSQAYFDALRTISRAFKNYPQTMFKKDLYLLEIIALGQLG 235

Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            K      +G ++I  YP   N+    Y V  +  +            K  ++Y  RI+ 
Sbjct: 236 IKKSLLIDIGTKWIKNYPTDPNIPEALYYVAKALDEN--------NNYKQAMRYYKRILL 287

Query: 168 RYTNSPYVKGARFYVTV 184
            Y NS Y   A+  + +
Sbjct: 288 EYKNSRYAPLAQMRLAI 304



 Score = 44.0 bits (103), Expect = 0.025,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 31/99 (31%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
             + RA   +    ++   + L I     +                +  TD      +Y 
Sbjct: 205 RTISRAFKNYPQTMFKKDLYLLEIIALGQLGIKKSLLIDIGTKWIKNYPTDPNIPEALYY 264

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
            A    +  N+ +A  Y+ +   ++  +  A  + +  A
Sbjct: 265 VAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRLA 303



 Score = 37.0 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 16/47 (34%)

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
           + NY    +  EA+  + +A        +A      I   Y    +A
Sbjct: 249 IKNYPTDPNIPEALYYVAKALDENNNYKQAMRYYKRILLEYKNSRYA 295


>gi|163733523|ref|ZP_02140966.1| hypothetical protein RLO149_17768 [Roseobacter litoralis Och 149]
 gi|161393311|gb|EDQ17637.1| hypothetical protein RLO149_17768 [Roseobacter litoralis Och 149]
          Length = 271

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 34/85 (40%), Gaps = 2/85 (2%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY-QQAAS 115
           + + ++ A   L + N+  A + F   S ++P   +A  + L         G+  + A +
Sbjct: 148 EEDDFKNAQAALADGNYQSAADQFAAFSMNYPGGPLAAGADLGRGEALEGLGRTREAARA 207

Query: 116 LGEEYITQYPESKNVDYVYYLVGMS 140
             + + +  P  +      + +G S
Sbjct: 208 YLDSF-SAEPTGQVAPQALFRLGKS 231


>gi|73671072|ref|YP_307087.1| TPR domain-containing protein [Methanosarcina barkeri str. Fusaro]
 gi|72398234|gb|AAZ72507.1| TPR-domain containing protein [Methanosarcina barkeri str. Fusaro]
          Length = 1979

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 70/226 (30%), Gaps = 56/226 (24%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++ ++ L    F  A +   + +   P           +   +  YS  +Y++A    EE
Sbjct: 452 QQGLILLDNGKFEPALKALEKVAELKPDNDACW-----MNKGYALYSMDRYEEALEDFEE 506

Query: 120 YITQYPESKNVDYVYYL------VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
            +   P         YL       G+   ++ R        T+  L+   + V    +  
Sbjct: 507 GLRLNP---------YLEKGWNNKGIVLGKLGR--------TEEALEAFEKAVSLRPDFE 549

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRY--------------Y------LKRGEYVAAIPRF 213
                R  + +  +     E     +              Y      LK G+   A+  F
Sbjct: 550 DAWKNRGLILLAVD---DYEKASEAFDEVLKTNPEDLDSIYNRGTALLKLGKTETALECF 606

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           + +L+   D     + +  L  A   L   +EA E    +  + P+
Sbjct: 607 EKILSLNPD---YPDLLYSLAVAQAKLGKQEEALETFEKLAAKNPE 649



 Score = 42.0 bits (98), Expect = 0.099,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 65/194 (33%), Gaps = 34/194 (17%)

Query: 53   DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
            D      +Y +++  L+ + + ++   F +  +  P +     + L +    +  G Y++
Sbjct: 1116 DPENLDALYMRSLALLRSKRYGESASGFREVLKRNP-SDTEALAHLST--ASFKQGFYEE 1172

Query: 113  AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
            A  L ++ +++ PE K    V +  G++   +           K        +++   + 
Sbjct: 1173 ALGLFDQVLSKNPERKT---VLFRKGVALKAL--------GEVKRASTIFDSVLKLKPDC 1221

Query: 173  PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
             Y    + Y                    +  EY  A+  F+  L         E+    
Sbjct: 1222 TYALEQKAYTH-----------------FELEEYPEAVEAFKTALEYCQK---KEDLYYY 1261

Query: 233  LVEAYVALALMDEA 246
               A+  L   +EA
Sbjct: 1262 RGIAFFRLGNFEEA 1275



 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 76/214 (35%), Gaps = 38/214 (17%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA-RKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y K ++    + + +A E F+   R+ P    A ++            GK ++A    + 
Sbjct: 179 YSKGLVLANLEKYGEALECFDSLIREKPRHKDAWKQKYFSLI----KLGKNEEALECVDA 234

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           ++ ++P S+      Y  G+   ++ R         +   +  ++I++    +       
Sbjct: 235 FLRKFPVSET---ALYQKGILLNELSR--------YEDAEKTFTKILKINPGNKE----- 278

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                 +  LA  ++      L+  +   AI  F+  +          EA      A + 
Sbjct: 279 ---IWLKKGLALIQL------LRLND---AIKAFEEAIKLDPT---YFEAWNYKCLALMK 323

Query: 240 LALMDEAREVVSLIQERYPQGY--WARYVETLVK 271
           L + +EA E    + E YP+    W      LVK
Sbjct: 324 LEVYEEALEAFDSVLEIYPETKEIWYNRALALVK 357



 Score = 40.5 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 16/134 (11%), Positives = 40/134 (29%), Gaps = 17/134 (12%)

Query: 53   DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
            D    + +Y   V+  K++ +  A   F++     P      +SL           +Y+ 
Sbjct: 1850 DPENIKAIYSVGVVCFKQKMYETACRAFDEALAINP---WHEQSLKYLGISLAKIEEYED 1906

Query: 113  AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
            A    +  +   P            G+   ++ +            +   + I+  Y   
Sbjct: 1907 ALRTFDRLLRIRPHDVQ---AMNYRGVILGKLGKYT--------EAINTFNEILRLYPE- 1954

Query: 173  PYVKGARFYVTVGR 186
              +  A+  +   +
Sbjct: 1955 --MADAKRKLEALK 1966



 Score = 39.7 bits (92), Expect = 0.41,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 72/226 (31%), Gaps = 31/226 (13%)

Query: 58   REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
              +Y ++    + Q+F +A +   +     P    + ++       +    + ++A    
Sbjct: 1648 NALYSRSEASFQLQHFEEAAQDLEKVLLSAPDFLNSIEACYRLGIARMELQECEKALEAF 1707

Query: 118  EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
            +  + Q P  +      Y  G+    +           +   +    ++E     P    
Sbjct: 1708 DIVLQQDPAHRE---ALYYRGLVLFNL--------SEYEAAAETFGMLLEASPEDP---E 1753

Query: 178  ARFYVTVGRNQLAAKEVE------IGRYYLKRGE--YVAA-----IPRFQLVLANYSD-- 222
            +  Y+ +   +L + E           +  K  E  Y AA     + R Q  +  +    
Sbjct: 1754 SLNYLGLCLLELESPEAALKAFEKAALFNPKNEETLYNAATTLIKLNRPQESIDYFDRIL 1813

Query: 223  --AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
              +    + +     A+  L +  EA +   L  E+ P+   A Y 
Sbjct: 1814 DISPENLDVLNYKGIAFCKLEMYREALKAFDLALEKDPENIKAIYS 1859



 Score = 39.3 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 71/208 (34%), Gaps = 44/208 (21%)

Query: 61   YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAASL 116
            Y K +   K +   +A + F +     P       +   + +      +  G +++A  +
Sbjct: 1056 YLKGISHSKLKQHKEAAKDFEKVLELDP-------AYQDTCYQLGLSYFELGNFEEAIRV 1108

Query: 117  GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
             E  +   P  +N+D   Y+  ++  +  R                  +++R  +     
Sbjct: 1109 FESALKMDP--ENLD-ALYMRSLALLRSKR--------YGESASGFREVLKRNPS----- 1152

Query: 177  GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                      +  A   +    +  K+G Y  A+  F  VL+   + +     + R   A
Sbjct: 1153 ----------DTEALAHLSTASF--KQGFYEEALGLFDQVLSKNPERKTV---LFRKGVA 1197

Query: 237  YVALALMDEAREVV-SLIQERYPQGYWA 263
              AL  +  A  +  S+++ + P   +A
Sbjct: 1198 LKALGEVKRASTIFDSVLKLK-PDCTYA 1224



 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/95 (14%), Positives = 40/95 (42%), Gaps = 6/95 (6%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D  +   ++ + +  LK +   +A + F+Q      F      +L        +  K++ 
Sbjct: 35  DSGHTGALFNRGLALLKIKKPEEALDSFDQV--LH-FEPENFDALYKKGIALATLEKFEA 91

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
           A    +  +   P++  +   +Y  G+++A++ ++
Sbjct: 92  ALETYDNALEINPDNPKI---WYQKGLAFAELEKN 123



 Score = 35.9 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 33/236 (13%), Positives = 74/236 (31%), Gaps = 62/236 (26%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV-----------------ARKS-- 96
            +  +Y+K +L  +   +  A + F +  +  P                     A K+  
Sbjct: 242 SETALYQKGILLNELSRYEDAEKTFTKILKINPGNKEIWLKKGLALIQLLRLNDAIKAFE 301

Query: 97  ---LLMSAF---------VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
               L   +                Y++A    +  +  YPE+K +   +Y   ++  ++
Sbjct: 302 EAIKLDPTYFEAWNYKCLALMKLEVYEEALEAFDSVLEIYPETKEI---WYNRALALVKL 358

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
                   +      +  SR  E      Y                      GR   + G
Sbjct: 359 --------QHFGEAAKSFSRTAELDP--AYGDALYQQ---------------GRLLAREG 393

Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           +Y  A+  F  +L    +   A++    ++   + L  ++EA + ++   E+ P+ 
Sbjct: 394 KYEEALKAFDSMLEQNPEFIKAQKLRGTML---IKLGRIEEALDSLAQSLEKEPEN 446


>gi|320535947|ref|ZP_08036012.1| hypothetical protein HMPREF9554_00737 [Treponema phagedenis F0421]
 gi|320147198|gb|EFW38749.1| hypothetical protein HMPREF9554_00737 [Treponema phagedenis F0421]
          Length = 528

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 33/82 (40%), Gaps = 9/82 (10%)

Query: 108 GKYQQAASLGEEYITQYPESKN-VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
           G    A +  E++      S+N +D  ++L G +Y     ++    R  +L L     + 
Sbjct: 450 GNAAGALASLEQFFVF---SENRIDEAWFLRGQAY-----ELNGPNRNIRLALDAYQTVT 501

Query: 167 ERYTNSPYVKGARFYVTVGRNQ 188
           + +  S + + +   +   +N 
Sbjct: 502 KTFPQSQWWEKSNDRIRYIKNF 523


>gi|227823306|ref|YP_002827278.1| hypothetical protein contains tetratricopeptide-like helical domain
           [Sinorhizobium fredii NGR234]
 gi|227342307|gb|ACP26525.1| hypothetical protein contains tetratricopeptide-like helical domain
           [Sinorhizobium fredii NGR234]
          Length = 340

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/146 (15%), Positives = 46/146 (31%), Gaps = 14/146 (9%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G    ++          +    ++Y+ A   +   ++  A + F      FP    A  +
Sbjct: 196 GNGGLNANPGSEQQTASLSNPGDLYQSAYGHVLSGDYGMAEQEFRDYLAAFPEGEKAADA 255

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPE---SKNVDYVYYLVGMSYAQMIRDVPYDQR 153
                  QYS GKY  A    + ++  +     S     +   +GMS   +         
Sbjct: 256 SFWMGEAQYSQGKYSDA---AKTFLNAHQAYGKSPKAPEMLLKLGMSLGALDNK------ 306

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGAR 179
             +     +  + +RY  +     A+
Sbjct: 307 --ETACATLREVDKRYPKASAAVRAK 330



 Score = 44.3 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 33/104 (31%), Gaps = 14/104 (13%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
             Q     +  +        A F++   +                +G+Y  A   F    
Sbjct: 235 AEQEFRDYLAAFPEGEKAADASFWMGEAQ--------------YSQGKYSDAAKTFLNAH 280

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             Y  +  A E + +L  +  AL   + A   +  + +RYP+  
Sbjct: 281 QAYGKSPKAPEMLLKLGMSLGALDNKETACATLREVDKRYPKAS 324


>gi|167753467|ref|ZP_02425594.1| hypothetical protein ALIPUT_01741 [Alistipes putredinis DSM 17216]
 gi|167658092|gb|EDS02222.1| hypothetical protein ALIPUT_01741 [Alistipes putredinis DSM 17216]
          Length = 995

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 59/194 (30%), Gaps = 21/194 (10%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YE    F+ ++ + +           + ++     +L        + G  +++ S  +  
Sbjct: 616 YELGRTFVAQERYREGAAVLEPFVETYVYSPYRSAALSELGLAYLNLGDKKKSLSYYDMV 675

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +   P+S +             Q IRD+   +        Y          S        
Sbjct: 676 VKTAPQSSDAKDAL--------QGIRDIYVSEGDAGGYFDYAR-------KSGVEGDLTA 720

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
                R+ L+       R     GE  +A    +  L +Y    +  +A+  L + Y+  
Sbjct: 721 M---SRDSLS---FAAARRIYLSGEPASAAKSLRSYLESYPKGYYTADALYCLSDCYLKT 774

Query: 241 ALMDEAREVVSLIQ 254
                A E ++ + 
Sbjct: 775 GERSRAIETLAALA 788



 Score = 41.3 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 71/234 (30%), Gaps = 46/234 (19%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           +  +     N+  A   +    +  P      A  +   + +  +S     +A      +
Sbjct: 471 QGEIAYGRGNYDVALRDYESYLKRAPKTEPEYAM-AFYNTGYCHFSKENMPRARESFVRF 529

Query: 121 ITQYPE------------------SKNVDYV--YYLVGMSYAQMIRDVPYDQRA------ 154
           I  YP                    +  D    YY    + +    D    QRA      
Sbjct: 530 IELYPTQDGYRTDARNRLGDTYYSDRQFDEALKYYGQAAAASDDGADYARYQRAVTLGIL 589

Query: 155 --TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
             T   ++ + +I+ R     Y+  A              E+  GR ++ +  Y      
Sbjct: 590 GRTSEKIKALQQII-RDGRGDYLDDAT------------YEL--GRTFVAQERYREGAAV 634

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
            +  +  Y  + +   A++ L  AY+ L    ++     ++ +  PQ   A+  
Sbjct: 635 LEPFVETYVYSPYRSAALSELGLAYLNLGDKKKSLSYYDMVVKTAPQSSDAKDA 688



 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 23/53 (43%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
           Y K    L    F++A +  N+    +P +   R +  + A   Y++  Y +A
Sbjct: 357 YGKLQYELGGGRFNEAIQVLNRYVAQYPSSPRVRTAKELLAAAYYNSHNYDEA 409


>gi|162448827|ref|YP_001611194.1| hypothetical protein sce0557 [Sorangium cellulosum 'So ce 56']
 gi|161159409|emb|CAN90714.1| hypothetical protein sce0557 [Sorangium cellulosum 'So ce 56']
          Length = 248

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 34/77 (44%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           R +  +  +A   L+  + + A     +    FP   + ++  +++  V  + G  Q+A 
Sbjct: 163 RAESALLTEARAKLRSGDVAGATALLERLRAQFPNGVLRQEREVLAIDVLAARGNAQEAK 222

Query: 115 SLGEEYITQYPESKNVD 131
              + ++ QYP+S +  
Sbjct: 223 RRAQAFVKQYPKSPHSA 239


>gi|253699982|ref|YP_003021171.1| sporulation domain protein [Geobacter sp. M21]
 gi|251774832|gb|ACT17413.1| Sporulation domain protein [Geobacter sp. M21]
          Length = 409

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 31/76 (40%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +   + + + G Y  A    + +L  +      EEA+  L ++Y A    ++A   V  +
Sbjct: 33  MATAKGHFQDGGYYYASTWLERILKKWPKTGQREEALVMLAKSYAATGREEKAARTVKTL 92

Query: 254 QERYPQGYWARYVETL 269
            + YPQ       E L
Sbjct: 93  LKEYPQTAAKLDPEML 108



 Score = 35.5 bits (81), Expect = 8.6,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 40/111 (36%), Gaps = 13/111 (11%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
              +      +  S+  C L+    Q               +  +   A    ++  +  
Sbjct: 1   MLNIRMLVAWMLLSVFCCPLISHAAQPD-------------EAAMMATAKGHFQDGGYYY 47

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
           A  +  +  + +P  G   ++L+M A    + G+ ++AA   +  + +YP+
Sbjct: 48  ASTWLERILKKWPKTGQREEALVMLAKSYAATGREEKAARTVKTLLKEYPQ 98


>gi|119511345|ref|ZP_01630458.1| hypothetical protein N9414_10942 [Nodularia spumigena CCY9414]
 gi|119463967|gb|EAW44891.1| hypothetical protein N9414_10942 [Nodularia spumigena CCY9414]
          Length = 268

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 45/274 (16%), Positives = 92/274 (33%), Gaps = 47/274 (17%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQR--EVYEKAVLFLKEQNFSKAYEYFNQ 82
            I   +++  ++GW         + S+T  + +   E+ +KA+    + +F+ A  Y+ Q
Sbjct: 4   LIGIVLSLLLVLGWSTPVLAVSEVPSITQEQLEEGNEIAKKALKATNKGDFATAETYWTQ 63

Query: 83  CSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
               FP      + +        + S  K Q A +   + I   P + +  Y      ++
Sbjct: 64  IIEQFPTNAGAWSNR-----GNSRVSQNKLQAALTDYNQAIELAPNATD-PY------LN 111

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV----KGARFYVTVGRNQLA--AKEV 194
               +  +       +  +   + ++E   N P        A+  +   ++ +A   K +
Sbjct: 112 RGTALEGLGK----WQEAIADYNHVLELDPNDPMAYNNRGNAKSGLGQWQDAIADYQKSM 167

Query: 195 EIG-RYYLKRGEYV----------AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
           EI   +   R  Y           AAI   + ++  Y        A+     AY      
Sbjct: 168 EIAPNFAFARANYALALYETGQIDAAIHEMKNIVRKYPQFADMRAAL---TAAYWVNGNQ 224

Query: 244 DEARE---VVSLIQERYPQGYW----ARYVETLV 270
            EA         +  RY    W     R+  ++V
Sbjct: 225 GEAESNWVAAYGLDNRYKDMNWVTNIRRWPPSMV 258


>gi|116878341|ref|YP_355439.2| hypothetical protein Pcar_0006 [Pelobacter carbinolicus DSM 2380]
 gi|114842977|gb|ABA87269.2| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
          Length = 283

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 74/214 (34%), Gaps = 36/214 (16%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ--YSAGKYQQAA 114
            +++Y +A   +++  +  A          +P      ++LL++  +   +     +   
Sbjct: 44  AQKLYRRAEKHIEKGAYRTAVSQLRSLHDHYPATETGARALLLAGDILLLHLRQDQEALL 103

Query: 115 S--LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           S  L E            DY              D  + QRA + +       ++ Y   
Sbjct: 104 SFLLVER-----------DY-------------PDTAWSQRARRQVADIYKYRLQDYGR- 138

Query: 173 PYVKGARFYVTV---GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
                A   +      + ++   E  I   Y +   +      F+ ++  Y ++    EA
Sbjct: 139 --ALVAYQKILDGPSTQREIVQYE--IADTYFRMNNFEQTRIEFESLINEYPESSLLPEA 194

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
           + R+  A++    + +A +V+  +   YP+  +A
Sbjct: 195 LYRIGCAFMLEGNLSDAVQVLQRLCRDYPEHSFA 228



 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 45/132 (34%), Gaps = 11/132 (8%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YE A  + +  NF +    F     ++P + +  ++L          G    A  + +  
Sbjct: 159 YEIADTYFRMNNFEQTRIEFESLINEYPESSLLPEALYRIGCAFMLEGNLSDAVQVLQRL 218

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
              YPE            +     + ++  ++   +  LQ ++ +  RY           
Sbjct: 219 CRDYPEHSF--------ALEGYFTLAEIHEERGELRKALQVLAGLEGRY---AREPILAQ 267

Query: 181 YVTVGRNQLAAK 192
            +T  +N++  K
Sbjct: 268 RITQVQNRIRKK 279


>gi|115526689|ref|YP_783600.1| TPR repeat-containing protein [Rhodopseudomonas palustris BisA53]
 gi|115520636|gb|ABJ08620.1| Tetratricopeptide TPR_2 repeat protein [Rhodopseudomonas palustris
           BisA53]
          Length = 336

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 33/133 (24%), Gaps = 22/133 (16%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
             K              Y  A      +  +YP  + V    Y +G S+ Q         
Sbjct: 211 TPKDEFDLGIGYMQRKDYALAEQTMRGFTQKYPSDRLVGDAQYWLGESFFQR-------- 262

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           +  +   +    +  +Y  S     A   +      L  KE              AA   
Sbjct: 263 QQYRDSAEAFLAVTTKYETSAKAADALLRLGQSLAALKEKE--------------AACAA 308

Query: 213 FQLVLANYSDAEH 225
           F  V   Y  A  
Sbjct: 309 FGEVARKYPRASA 321



 Score = 39.3 bits (91), Expect = 0.57,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 43/110 (39%), Gaps = 14/110 (12%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           ++   L  Q M    ++Y +   V  A++++              G  + +R +Y  +  
Sbjct: 225 RKDYALAEQTMRGFTQKYPSDRLVGDAQYWL--------------GESFFQRQQYRDSAE 270

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            F  V   Y  +  A +A+ RL ++  AL   + A      +  +YP+  
Sbjct: 271 AFLAVTTKYETSAKAADALLRLGQSLAALKEKEAACAAFGEVARKYPRAS 320



 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 10/126 (7%), Positives = 40/126 (31%), Gaps = 14/126 (11%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
             +    +  ++ ++  + +++ ++++ A +     ++ +P   +   +        +  
Sbjct: 203 PPTAPPSQTPKDEFDLGIGYMQRKDYALAEQTMRGFTQKYPSDRLVGDAQYWLGESFFQR 262

Query: 108 GKYQQAASLGEEYITQ---YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
            +Y       E ++     Y  S         +G S A +        +  +        
Sbjct: 263 QQY---RDSAEAFLAVTTKYETSAKAADALLRLGQSLAAL--------KEKEAACAAFGE 311

Query: 165 IVERYT 170
           +  +Y 
Sbjct: 312 VARKYP 317


>gi|218442020|ref|YP_002380349.1| hypothetical protein PCC7424_5131 [Cyanothece sp. PCC 7424]
 gi|218174748|gb|ACK73481.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424]
          Length = 361

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 42/116 (36%), Gaps = 14/116 (12%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++ + V  +K  NFS A + F +  R  P    A          +   G  + A     +
Sbjct: 49  LFNQGVAKIKAGNFSAAIKDFTEVIRLNPNLPEAYN---NRGNARSKLGDNKGAIEDYNQ 105

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
            I   P+S+     YY  G + +++  +        K  ++  ++ +    NS   
Sbjct: 106 AINLNPKSEQ---AYYNRGKARSELGDN--------KGAIEDYNQALNLNPNSAEA 150


>gi|75676897|ref|YP_319318.1| TPR repeat-containing protein [Nitrobacter winogradskyi Nb-255]
 gi|74421767|gb|ABA05966.1| TPR repeat protein [Nitrobacter winogradskyi Nb-255]
          Length = 305

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 31/129 (24%), Gaps = 22/129 (17%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
                        Y  A      +  +YP         Y +G S  Q  +         +
Sbjct: 184 QFDLGIGYMQRKDYALAEETMRSFTEKYPSDTLTGDAQYWLGESLFQRQK--------YR 235

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              +    +  +Y +S  V  A   +      L  KE              AA   F  V
Sbjct: 236 EAAEAFLGVTTKYDSSAKVADALLRLGQSLAALKEKE--------------AACAAFGEV 281

Query: 217 LANYSDAEH 225
              Y  A  
Sbjct: 282 TRKYPRASA 290



 Score = 38.9 bits (90), Expect = 0.69,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 46/126 (36%), Gaps = 14/126 (11%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           L ++      R+ ++  + +++ ++++ A E     +  +P   +   +        +  
Sbjct: 172 LTTLPPSATPRDQFDLGIGYMQRKDYALAEETMRSFTEKYPSDTLTGDAQYWLGESLFQR 231

Query: 108 GKYQQAASLGEEYI---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
            KY++A    E ++   T+Y  S  V      +G S A +        +  +        
Sbjct: 232 QKYREA---AEAFLGVTTKYDSSAKVADALLRLGQSLAAL--------KEKEAACAAFGE 280

Query: 165 IVERYT 170
           +  +Y 
Sbjct: 281 VTRKYP 286



 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 41/123 (33%), Gaps = 24/123 (19%)

Query: 149 PYDQ----------RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           P DQ          +   L  + M    E+Y +      A++++                
Sbjct: 181 PRDQFDLGIGYMQRKDYALAEETMRSFTEKYPSDTLTGDAQYWLGESL------------ 228

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
              +R +Y  A   F  V   Y  +    +A+ RL ++  AL   + A      +  +YP
Sbjct: 229 --FQRQKYREAAEAFLGVTTKYDSSAKVADALLRLGQSLAALKEKEAACAAFGEVTRKYP 286

Query: 259 QGY 261
           +  
Sbjct: 287 RAS 289


>gi|223038565|ref|ZP_03608858.1| TPR repeat-containing protein [Campylobacter rectus RM3267]
 gi|222879967|gb|EEF15055.1| TPR repeat-containing protein [Campylobacter rectus RM3267]
          Length = 297

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 35/98 (35%), Gaps = 7/98 (7%)

Query: 176 KGARFYVTVGRNQLAAKEVEIGRYY-----LKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
             A+       ++    +  +  +Y      K+  Y  AI  +Q  +  Y  A++  + +
Sbjct: 200 DDAKARYEYLLSK--DHKPAMANFYLGEIAYKQKAYNNAIKHYQQSIQLYDKADYTPKLL 257

Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
                ++  +   + A +    ++  YP    A+   T
Sbjct: 258 YHTAISFDKIKDTESANKFYKALKLGYPDSKEAKQAPT 295



 Score = 43.2 bits (101), Expect = 0.042,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 39/130 (30%), Gaps = 17/130 (13%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           R  ++V  +A           A   +           +A   L   A   Y    Y  A 
Sbjct: 181 RKNQDVASEAKKLFDAGKLDDAKARYEYLLSKDHKPAMANFYLGEIA---YKQKAYNNAI 237

Query: 115 SLGEEYITQYPESKNVDY---VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
              ++ I  Y      DY   + Y   +S+ ++        + T+   ++   +   Y +
Sbjct: 238 KHYQQSIQLY---DKADYTPKLLYHTAISFDKI--------KDTESANKFYKALKLGYPD 286

Query: 172 SPYVKGARFY 181
           S   K A   
Sbjct: 287 SKEAKQAPTR 296


>gi|16332023|ref|NP_442751.1| soluble lytic transglycosylase [Synechocystis sp. PCC 6803]
 gi|1001335|dbj|BAA10822.1| soluble lytic transglycosylase [Synechocystis sp. PCC 6803]
          Length = 847

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/209 (20%), Positives = 66/209 (31%), Gaps = 39/209 (18%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A          +P   +A   LLM       + +  QA +  ++ + QYP+S  V     
Sbjct: 224 ALRVLEGLEVQYP--VLAPYILLMRGRGYQLSNENDQAEATWQDILDQYPDSPVVVNALE 281

Query: 136 LVGM---SYAQM-IRDVPYDQRATK----------LMLQYMSRIVERYTNSPYVKGARFY 181
            +G    +Y Q  I D P   R               L+   +I++ +            
Sbjct: 282 NLGSLDETYWQQAIADHPGHPRTLAILHQQLESEPNALEIQRQILQNHPT-------DGR 334

Query: 182 VTVGRNQLAAK---EV------EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
                N L A    E+       +G  +  R  Y  AI       A Y  A      + R
Sbjct: 335 TAAVINSLTANRQGELTPEDWQAMGDNFWHRRIYNQAI-------APYEKAPSNARNLYR 387

Query: 233 LVEAYVALALMDEAREVVSLIQERYPQGY 261
           L  A     L +EA+E    +   YP   
Sbjct: 388 LARAQQISKLDNEAKENYRQLIATYPDSE 416



 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 75/220 (34%), Gaps = 43/220 (19%)

Query: 73  FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
           +++A   + +   +        ++L   A  Q  +    +A     + I  YP+S+    
Sbjct: 368 YNQAIAPYEKAPSN-------ARNLYRLARAQQISKLDNEAKENYRQLIATYPDSEETAL 420

Query: 133 VYYLV--------GMSYAQMIRDVPYDQRATKLM--LQYMSRI------------VERYT 170
               +        G+ Y Q +     DQ A+ L   +  +++             +++Y 
Sbjct: 421 ALRRLAELVPPREGVQYLQQLEQQFPDQGASALAARIDLLAKFDANQAQQARQALLQKYP 480

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
           NS      R+          A+E        K G Y  A    + +      ++   +A+
Sbjct: 481 NSDAAADYRWR--------QAQEFA------KAGNYTEAWRWAKEIANQNPQSDVTPKAI 526

Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
             + +    L    +++     +  +YPQ Y+A     L+
Sbjct: 527 FWIGKWAQQLGRSADSKAAFETVLAKYPQSYYAWRSAVLL 566


>gi|239997031|ref|ZP_04717555.1| ATP-dependent protease La [Alteromonas macleodii ATCC 27126]
          Length = 396

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 73/249 (29%), Gaps = 37/249 (14%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           + +L I F  A+ F  G    S   +Y  +       +      + +L+  N+++A +  
Sbjct: 6   RTSLKIGFLSAIIFTSGCVSNSQSGLYGGNFDHEEAAKTRMSLGLTYLQNNNYTQAKKNL 65

Query: 81  NQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
           ++       F   +       A+     G   +A    E  I   P + ++         
Sbjct: 66  DKALE----FNPRSADVQFAMAYYYQLVGDNLRAEEYYETAIDLAPNNGDI-------AN 114

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           SY              +    Y    +    N  Y   A+ Y  +     +         
Sbjct: 115 SYGA----FKCQNGEYEKAKAYFFDAIN---NRLYANAAQTYENLALCAQSQ-------- 159

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS---LIQER 256
               G+   AI  FQ  L +        +++  L E Y      + A   +     + + 
Sbjct: 160 ----GKLDEAIGYFQDALKHQP---ARGKSLFLLSELYTVSEQWELAESTLRKYERVAKV 212

Query: 257 YPQGYWARY 265
            P   W  Y
Sbjct: 213 TPDSLWLAY 221


>gi|119492428|ref|ZP_01623749.1| serine/threonine kinase [Lyngbya sp. PCC 8106]
 gi|119453094|gb|EAW34263.1| serine/threonine kinase [Lyngbya sp. PCC 8106]
          Length = 724

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 49/172 (28%), Gaps = 38/172 (22%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
            D    +  + + V  L++ N   A     Q      +     ++        Y   +YQ
Sbjct: 330 PDPIKAQVAFSQGVEKLEKGNPKAAVRTLTQAIN---YNSDNPEAYHQRGNAYYDLEQYQ 386

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            A     + I   P   N    Y+  G++          D +     +   S+++E    
Sbjct: 387 NAIEDYTQAIQLNPNYTN---AYFNRGLARY--------DAQDLSGAIADYSKVIELEPT 435

Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
                                       Y KRG    A+  +Q  + +YS+ 
Sbjct: 436 DVDA------------------------YYKRGLAHYALEDYQKAIEDYSEV 463



 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 31/87 (35%), Gaps = 7/87 (8%)

Query: 54  VRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
                + Y  + ++ + +Q+F  A   + +     P      +S    A   Y    Y Q
Sbjct: 602 TPTDHKAYSNRGMVQVAQQDFQAAIADYTKAIELNPNDA---QSYSNRATTYYELQDYNQ 658

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGM 139
           A +   + I   P+  N    YY  G+
Sbjct: 659 AIADYVQAIRLKPDYPN---AYYGRGI 682


>gi|218247929|ref|YP_002373300.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801]
 gi|218168407|gb|ACK67144.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801]
          Length = 270

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 49/291 (16%), Positives = 98/291 (33%), Gaps = 76/291 (26%)

Query: 24  LTIFFSIAVCFLVGWERQSS---RDVYLDSVTDVRYQR--EVYEKAVLFLKEQNFSKAYE 78
           + +F ++     +G+    +   +D  + S+T+ + Q+  E+ +KA+   ++ NFS+A  
Sbjct: 2   IRLFVTLLTILWLGFATIPTALAQDTSILSITEEQLQQGEEIAKKAIEATEKGNFSQAEA 61

Query: 79  YFNQCSRDFPFAG--VAR-------KSLLMSAFVQYS----------------------A 107
           Y++Q    FP      +        ++ L  A   ++                       
Sbjct: 62  YWSQLIEQFPSNPAVWSNRGNSRVSQNKLDEAIADFNQAITLAPNEPDPYLNRGAALEGQ 121

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           GKYQ+A +     +   P    + Y              +        +  L+   + VE
Sbjct: 122 GKYQEAIADYNHVLELDP-HDAMAY----------NNRGNAEGGLGQWEKALEDYQKAVE 170

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
              N  + K            LA+ ++         G    A+ + + ++  Y       
Sbjct: 171 IQPNFAFAK--------ANVALASYQL---------GNTQEALNQMRKIVRKYPMFPDMR 213

Query: 228 EAM-ARLVEAYVALALMDEARE--VVSL-IQERYPQGYW----ARYVETLV 270
            A+ A L E    L    EA    V ++ +  RY    W     R+   +V
Sbjct: 214 AALTAVLWE----LGQQGEAESNWVAAVGMDNRYQDLEWVSHIRRWPPEMV 260


>gi|296436080|gb|ADH18254.1| hypothetical protein G9768_02865 [Chlamydia trachomatis G/9768]
 gi|296437941|gb|ADH20102.1| hypothetical protein G11074_02870 [Chlamydia trachomatis G/11074]
 gi|297140441|gb|ADH97199.1| hypothetical protein CTG9301_02875 [Chlamydia trachomatis G/9301]
          Length = 318

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 52/165 (31%), Gaps = 22/165 (13%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
            ++   S         +Y K  L    + +S+A +   + S  FP   ++ +S  + A +
Sbjct: 158 EEIVTASSDADLKASALYAKGALLFDRKEYSEAIKTLKKVSLQFPSHSLSPESFTLIAKI 217

Query: 104 Q--------YSAGKYQQAASLGEEYITQYPESK----------NVDYVYYLVGMSYAQMI 145
                    Y+    Q A         Q+P             ++   Y           
Sbjct: 218 HCLQALQEPYNEQYLQDARMNAAALRKQHPNHPSNTEVENYIHHMCEAY---ASCLYSTG 274

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
           R     ++A+     Y S  +E + ++ YV      +     Q++
Sbjct: 275 RFYEKKRKAS-SAKIYYSIALENFPDTSYVAKCNKRLERLSKQMS 318



 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 56/149 (37%), Gaps = 6/149 (4%)

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
            A+ +LL      +   +Y +A    ++   Q+P        + L+   +       PY+
Sbjct: 175 YAKGALL------FDRKEYSEAIKTLKKVSLQFPSHSLSPESFTLIAKIHCLQALQEPYN 228

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           ++  +      + + +++ N P       Y+       A+     GR+Y K+ +  +A  
Sbjct: 229 EQYLQDARMNAAALRKQHPNHPSNTEVENYIHHMCEAYASCLYSTGRFYEKKRKASSAKI 288

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVAL 240
            + + L N+ D  +  +   RL      +
Sbjct: 289 YYSIALENFPDTSYVAKCNKRLERLSKQM 317



 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 82/261 (31%), Gaps = 43/261 (16%)

Query: 23  ALTIFFSI-AVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYF 80
           AL +F  +   C+      +  R     +    ++  E+Y E    + + + F +A   F
Sbjct: 7   ALCLFLVLPCGCYARVPSFEPFRGAIAPNRYTPKHSPELYFEMGDKYFQAKKFKQALLCF 66

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY------VY 134
              +  FP   +  K+  +        G    A     +Y        + +Y      + 
Sbjct: 67  GMLTHHFPEHALHPKAQFLVGLCYLEMGHPDLADKALTQYQEL----ADTEYSEQLFAIK 122

Query: 135 YLVGMSYAQMIR-------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           Y +  S+A   R         P   +A    L+    IV   ++       +      + 
Sbjct: 123 YSIAQSFANGKRKNIVPLEGFPKLLKADTDALRIFEEIVTASSD----ADLKASALYAKG 178

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA---------MARLVEAYV 238
            L             R EY  AI   + V   +     + E+         +  L E Y 
Sbjct: 179 ALL----------FDRKEYSEAIKTLKKVSLQFPSHSLSPESFTLIAKIHCLQALQEPYN 228

Query: 239 ALALMDEAREVVSLIQERYPQ 259
               + +AR   + +++++P 
Sbjct: 229 E-QYLQDARMNAAALRKQHPN 248


>gi|255311365|ref|ZP_05353935.1| hypothetical protein Ctra62_02870 [Chlamydia trachomatis 6276]
 gi|255317666|ref|ZP_05358912.1| hypothetical protein Ctra6_02860 [Chlamydia trachomatis 6276s]
          Length = 318

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 52/165 (31%), Gaps = 22/165 (13%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
            ++   S         +Y K  L    + +S+A +   + S  FP   ++ +S  + A +
Sbjct: 158 EEIVTASSDADLKASALYAKGALLFDRKEYSEAIKTLKKVSLQFPSHSLSPESFTLIAKI 217

Query: 104 Q--------YSAGKYQQAASLGEEYITQYPESK----------NVDYVYYLVGMSYAQMI 145
                    Y+    Q A         Q+P             ++   Y           
Sbjct: 218 HCLQALQEPYNEQYLQDARMNAAALRKQHPNHPSNTEVENYIHHMCEAY---ASCLYSTG 274

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
           R     ++A+     Y S  +E + ++ YV      +     Q++
Sbjct: 275 RFYEKKRKAS-SAKIYYSIALENFPDTSYVAKCNKRLERLSKQMS 318



 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 56/149 (37%), Gaps = 6/149 (4%)

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
            A+ +LL      +   +Y +A    ++   Q+P        + L+   +       PY+
Sbjct: 175 YAKGALL------FDRKEYSEAIKTLKKVSLQFPSHSLSPESFTLIAKIHCLQALQEPYN 228

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           ++  +      + + +++ N P       Y+       A+     GR+Y K+ +  +A  
Sbjct: 229 EQYLQDARMNAAALRKQHPNHPSNTEVENYIHHMCEAYASCLYSTGRFYEKKRKASSAKI 288

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVAL 240
            + + L N+ D  +  +   RL      +
Sbjct: 289 YYSIALENFPDTSYVAKCNKRLERLSKQM 317



 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 82/261 (31%), Gaps = 43/261 (16%)

Query: 23  ALTIFFSI-AVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYF 80
           AL +F  +   C+      +  R     +    ++  E+Y E    + + + F +A   F
Sbjct: 7   ALCLFLVLPCGCYARVPSFEPFRGAIAPNRYTPKHSPELYFEIGDKYFQAKKFKQALLCF 66

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY------VY 134
              +  FP   +  K+  +        G    A     +Y        + +Y      + 
Sbjct: 67  GMLTHHFPEHALHPKAQFLVGLCYLEMGHPDLADKALTQYQEL----ADTEYSEQLFAIK 122

Query: 135 YLVGMSYAQMIR-------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           Y +  S+A   R         P   +A    L+    IV   ++       +      + 
Sbjct: 123 YSIAQSFANGKRKNIVPLEGFPKLLKADTDALRIFEEIVTASSD----ADLKASALYAKG 178

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA---------MARLVEAYV 238
            L             R EY  AI   + V   +     + E+         +  L E Y 
Sbjct: 179 ALL----------FDRKEYSEAIKTLKKVSLQFPSHSLSPESFTLIAKIHCLQALQEPYN 228

Query: 239 ALALMDEAREVVSLIQERYPQ 259
               + +AR   + +++++P 
Sbjct: 229 E-QYLQDARMNAAALRKQHPN 248


>gi|210135433|ref|YP_002301872.1| paralysed flagella protein [Helicobacter pylori P12]
 gi|210133401|gb|ACJ08392.1| paralysed flagella protein [Helicobacter pylori P12]
          Length = 801

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 49/137 (35%), Gaps = 9/137 (6%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             +T   Y    Y +A   +  Q +  A    ++  +++P     +   L+        G
Sbjct: 186 PLLTTKGYDLNAYLEAKKQMDSQAYFDALRTISRAFKNYPQTMFKKDLYLLEIIALGQLG 245

Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            K      +G ++I  YP   N+    Y V  +  +            K  ++Y  RI+ 
Sbjct: 246 IKKSLLIDIGTKWIKNYPTDPNIPEALYYVAKALDEN--------NNYKQAMRYYKRILL 297

Query: 168 RYTNSPYVKGARFYVTV 184
            Y NS Y   A+  + +
Sbjct: 298 EYKNSRYAPLAQMRLAI 314



 Score = 43.6 bits (102), Expect = 0.027,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 31/99 (31%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
             + RA   +    ++   + L I     +                +  TD      +Y 
Sbjct: 215 RTISRAFKNYPQTMFKKDLYLLEIIALGQLGIKKSLLIDIGTKWIKNYPTDPNIPEALYY 274

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
            A    +  N+ +A  Y+ +   ++  +  A  + +  A
Sbjct: 275 VAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRLA 313



 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 16/47 (34%)

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
           + NY    +  EA+  + +A        +A      I   Y    +A
Sbjct: 259 IKNYPTDPNIPEALYYVAKALDENNNYKQAMRYYKRILLEYKNSRYA 305


>gi|166154762|ref|YP_001654880.1| hypothetical protein CTL0809 [Chlamydia trachomatis 434/Bu]
 gi|166155637|ref|YP_001653892.1| hypothetical protein CTLon_0804 [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|301336036|ref|ZP_07224280.1| hypothetical protein CtraL_04390 [Chlamydia trachomatis L2tet1]
 gi|165930750|emb|CAP04247.1| putative exported protein [Chlamydia trachomatis 434/Bu]
 gi|165931625|emb|CAP07201.1| putative exported protein [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 318

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 52/165 (31%), Gaps = 22/165 (13%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
            ++   S         +Y K  L    + +S+A +   + S  FP   ++ +S  + A +
Sbjct: 158 EEIVTASSDADLKASALYAKGALLFDRKEYSEAIKTLKKVSLQFPSHSLSPESFTLIAKI 217

Query: 104 Q--------YSAGKYQQAASLGEEYITQYPESK----------NVDYVYYLVGMSYAQMI 145
                    Y+    Q A         Q+P             ++   Y           
Sbjct: 218 HCLQALQEPYNEQYLQDARMNAAALRKQHPNHPSNTEVENYIHHMCEAY---ASCLYSTG 274

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
           R     ++A+     Y S  +E + ++ YV      +     Q++
Sbjct: 275 RFYEKKRKAS-SAKIYYSIALENFPDTSYVAKCNKRLERLSKQMS 318



 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 56/149 (37%), Gaps = 6/149 (4%)

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
            A+ +LL      +   +Y +A    ++   Q+P        + L+   +       PY+
Sbjct: 175 YAKGALL------FDRKEYSEAIKTLKKVSLQFPSHSLSPESFTLIAKIHCLQALQEPYN 228

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           ++  +      + + +++ N P       Y+       A+     GR+Y K+ +  +A  
Sbjct: 229 EQYLQDARMNAAALRKQHPNHPSNTEVENYIHHMCEAYASCLYSTGRFYEKKRKASSAKI 288

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVAL 240
            + + L N+ D  +  +   RL      +
Sbjct: 289 YYSIALENFPDTSYVAKCNKRLERLSKQM 317



 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 82/261 (31%), Gaps = 43/261 (16%)

Query: 23  ALTIFFSI-AVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYF 80
           AL +F  +   C+      +  R     +    ++  E+Y E    + + + F +A   F
Sbjct: 7   ALCLFLVLPCGCYARVPSFEPFRGAIAPNRYIPKHSPELYFEMGDKYFQAKKFKQALLCF 66

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY------VY 134
              +  FP   +  K+  +        G    A     +Y        + +Y      + 
Sbjct: 67  GMITHHFPEHALHPKAQFLVGLCYLEMGHPDLADKALTQYQEL----ADTEYSEQLFAIK 122

Query: 135 YLVGMSYAQMIR-------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           Y +  S+A   R         P   +A    L+    IV   ++       +      + 
Sbjct: 123 YSIAQSFANGKRKNIVPLEGFPKLLKADTDALRIFEEIVTASSD----ADLKASALYAKG 178

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA---------MARLVEAYV 238
            L             R EY  AI   + V   +     + E+         +  L E Y 
Sbjct: 179 ALL----------FDRKEYSEAIKTLKKVSLQFPSHSLSPESFTLIAKIHCLQALQEPYN 228

Query: 239 ALALMDEAREVVSLIQERYPQ 259
               + +AR   + +++++P 
Sbjct: 229 E-QYLQDARMNAAALRKQHPN 248


>gi|15605276|ref|NP_220062.1| hypothetical protein CT547 [Chlamydia trachomatis D/UW-3/CX]
 gi|255348925|ref|ZP_05380932.1| hypothetical protein Ctra70_02915 [Chlamydia trachomatis 70]
 gi|255503465|ref|ZP_05381855.1| hypothetical protein Ctra7_02925 [Chlamydia trachomatis 70s]
 gi|255507143|ref|ZP_05382782.1| hypothetical protein CtraD_02900 [Chlamydia trachomatis D(s)2923]
 gi|3328986|gb|AAC68149.1| hypothetical protein CT_547 [Chlamydia trachomatis D/UW-3/CX]
 gi|289525592|emb|CBJ15070.1| putative exported protein [Chlamydia trachomatis Sweden2]
 gi|296435152|gb|ADH17330.1| hypothetical protein E150_02890 [Chlamydia trachomatis E/150]
 gi|296437008|gb|ADH19178.1| hypothetical protein G11222_02875 [Chlamydia trachomatis G/11222]
 gi|296438872|gb|ADH21025.1| hypothetical protein E11023_02875 [Chlamydia trachomatis E/11023]
          Length = 318

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 52/165 (31%), Gaps = 22/165 (13%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
            ++   S         +Y K  L    + +S+A +   + S  FP   ++ +S  + A +
Sbjct: 158 EEIVTASSDADLKASALYAKGALLFDRKEYSEAIKTLKKVSLQFPSHSLSPESFTLIAKI 217

Query: 104 Q--------YSAGKYQQAASLGEEYITQYPESK----------NVDYVYYLVGMSYAQMI 145
                    Y+    Q A         Q+P             ++   Y           
Sbjct: 218 HCLQALQEPYNEQYLQDARMNAAALRKQHPNHPSNTEVENYIHHMCEAY---ASCLYSTG 274

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
           R     ++A+     Y S  +E + ++ YV      +     Q++
Sbjct: 275 RFYEKKRKAS-SAKIYYSIALENFPDTSYVAKCNKRLERLSKQMS 318



 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 56/149 (37%), Gaps = 6/149 (4%)

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
            A+ +LL      +   +Y +A    ++   Q+P        + L+   +       PY+
Sbjct: 175 YAKGALL------FDRKEYSEAIKTLKKVSLQFPSHSLSPESFTLIAKIHCLQALQEPYN 228

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           ++  +      + + +++ N P       Y+       A+     GR+Y K+ +  +A  
Sbjct: 229 EQYLQDARMNAAALRKQHPNHPSNTEVENYIHHMCEAYASCLYSTGRFYEKKRKASSAKI 288

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVAL 240
            + + L N+ D  +  +   RL      +
Sbjct: 289 YYSIALENFPDTSYVAKCNKRLERLSKQM 317



 Score = 36.6 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 82/261 (31%), Gaps = 43/261 (16%)

Query: 23  ALTIFFSI-AVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYF 80
           AL +F  +   C+      +  R     +    ++  E+Y E    + + + F +A   F
Sbjct: 7   ALCLFLVLPCGCYARVPSFEPFRGAIAPNRYTPKHSPELYFEMGDKYFQAKKFKQALLCF 66

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY------VY 134
              +  FP   +  K+  +        G    A     +Y        + +Y      + 
Sbjct: 67  GMITHHFPEHALHPKAQFLVGLCYLEMGHPDLADKALTQYQEL----ADTEYSEQLFAIK 122

Query: 135 YLVGMSYAQMIR-------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           Y +  S+A   R         P   +A    L+    IV   ++       +      + 
Sbjct: 123 YSIAQSFANGKRKNIVPLEGFPKLLKADTDALRIFEEIVTASSD----ADLKASALYAKG 178

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA---------MARLVEAYV 238
            L             R EY  AI   + V   +     + E+         +  L E Y 
Sbjct: 179 ALL----------FDRKEYSEAIKTLKKVSLQFPSHSLSPESFTLIAKIHCLQALQEPYN 228

Query: 239 ALALMDEAREVVSLIQERYPQ 259
               + +AR   + +++++P 
Sbjct: 229 E-QYLQDARMNAAALRKQHPN 248


>gi|255530277|ref|YP_003090649.1| tetratricopeptide domain-containing protein [Pedobacter heparinus
           DSM 2366]
 gi|255343261|gb|ACU02587.1| Tetratricopeptide TPR_3 [Pedobacter heparinus DSM 2366]
          Length = 602

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/137 (12%), Positives = 37/137 (27%), Gaps = 7/137 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
                    ++Y  A +        KA    +  +  FP   +    L+  + +   + +
Sbjct: 467 QTPTDSNALKMYADAEMLQFRNLPMKAIAKLDSINIAFPNNSLTDDILMAKSKIYIKSNE 526

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
             +A +  +  I     S   D            +        +  +       +++  Y
Sbjct: 527 TDKAVAALKAIIDLKDSSIWADDAL-------FTLADLYEKSGKDNEQAKNLYQKLINDY 579

Query: 170 TNSPYVKGARFYVTVGR 186
             S Y   AR      R
Sbjct: 580 PGSMYTAEARKRFRKLR 596


>gi|302035770|ref|YP_003796092.1| hypothetical protein NIDE0388 [Candidatus Nitrospira defluvii]
 gi|300603834|emb|CBK40166.1| exported protein of unknown function, TPR domain [Candidatus
           Nitrospira defluvii]
          Length = 173

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/148 (13%), Positives = 47/148 (31%), Gaps = 8/148 (5%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
            I V   +     +   ++  S         +Y++ +   + +++  A   F        
Sbjct: 13  GICVILALIGNFTTVPTLFAASPQPPDDAHRLYDRVMEEFRHKDYPAALAGFRFFLELHG 72

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
            + ++  +       QY  G+Y+ A       I+ YP S+ +         +    I  +
Sbjct: 73  QSSLSANAQYWKGECQYRMGRYKDALDSFYSLISDYPMSQKLA--------ASTLKIGQI 124

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVK 176
              Q           R+  +Y +S   +
Sbjct: 125 YTKQGDRDKAQMMFERVTGQYPDSAEAE 152



 Score = 35.9 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 14/104 (13%), Positives = 37/104 (35%), Gaps = 14/104 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             L      +E +  S     A+++    +               + G Y  A+  F  +
Sbjct: 59  AALAGFRFFLELHGQSSLSANAQYWKGECQ--------------YRMGRYKDALDSFYSL 104

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           +++Y  ++    +  ++ + Y      D+A+ +   +  +YP  
Sbjct: 105 ISDYPMSQKLAASTLKIGQIYTKQGDRDKAQMMFERVTGQYPDS 148


>gi|289192835|ref|YP_003458776.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22]
 gi|288939285|gb|ADC70040.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22]
          Length = 336

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 66/201 (32%), Gaps = 40/201 (19%)

Query: 62  EKAVLFLKEQNFSKAYEYF----NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +K    LK     KA EYF     +   ++       K+L       Y+    + A    
Sbjct: 137 KKGYALLKLNKPKKAMEYFKIALEKDKNNY-------KALFGLGEAYYNLNDEENAIKYF 189

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           E+ +   P+ K        +G  Y +                +   R +  Y      K 
Sbjct: 190 EKVLELNPDDKE---ALEYLGDIYYE----------------EDYERAINYY------KK 224

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           A    +   N +    ++I   Y++  +Y  A+  F+  L    D    EE    +   Y
Sbjct: 225 ALELKSDDINLI----LKIAYSYMELKKYKEALKYFKKALKLNPDVFKLEEIFEFMGRIY 280

Query: 238 VALALMDEAREVVSLIQERYP 258
           + L   ++A E    ++E  P
Sbjct: 281 IYLGEDEKAMEYFEKLKEINP 301


>gi|319952096|ref|YP_004163363.1| tetratricopeptide tpr_1 repeat-containing protein [Cellulophaga
           algicola DSM 14237]
 gi|319420756|gb|ADV47865.1| Tetratricopeptide TPR_1 repeat-containing protein [Cellulophaga
           algicola DSM 14237]
          Length = 1005

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 60/208 (28%), Gaps = 38/208 (18%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQ-------CSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
           Y       K + +  A   F           +          + L      +++ KY  A
Sbjct: 505 YSLGYTNFKLKEYVNAATNFAAYASGSTDVDKKH-------DAYLRLGDSYFASSKYWPA 557

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
                +           DY  +   +SY         D+ ATK  ++ ++  + RY  S 
Sbjct: 558 IEAYNQ--ALEGAGSEKDYAAFQKALSYG------FVDRAATK--IEELNAFIGRYPKST 607

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
                                E+G  Y++  +    +  +  +++ Y  +    +A+ R 
Sbjct: 608 LKDDVL--------------FELGNSYVRGNKEEEGLKVYDKLISEYKGSSLVPQAIVRQ 653

Query: 234 VEAYVALALMDEAREVVSLIQERYPQGY 261
              Y      D+A      +   YP   
Sbjct: 654 GLVYYNSNRSDQALVKFKTVVRDYPDTQ 681



 Score = 45.5 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 62/212 (29%), Gaps = 34/212 (16%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSR---DFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           Y      L      +A     + +     +P + +    L           K ++   + 
Sbjct: 574 YAAFQKALSYGFVDRAATKIEELNAFIGRYPKSTLKDDVLFELGNSYVRGNKEEEGLKVY 633

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           ++ I++Y  S  V       G+ Y    R            L     +V  Y ++     
Sbjct: 634 DKLISEYKGSSLVPQAIVRQGLVYYNSNRS--------DQALVKFKTVVRDYPDTQEAVQ 685

Query: 178 A--RFYVTVG-RNQLAAK---------------EVEIGRYYLKRGEYVA-----AIPRFQ 214
           A     +      +++                 E++   +     +Y+      A+  +Q
Sbjct: 686 AVTTAKLIYVDLGRVSEYAEWVRGLDFVEVTDAELDNATFQSADQKYIEGNREQALKGYQ 745

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
             L  +    HA +A   L + Y A    D+A
Sbjct: 746 AYLKEFPKGLHALKANFNLAQLYFAQGDKDKA 777



 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 42/175 (24%), Gaps = 27/175 (15%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI-T 122
              +     +  A  Y             +        +  Y  G Y  A     + I  
Sbjct: 251 GESYFNLNQYENAIPYL--LDYQGRNGKFSNTDYYFLGYSYYKKGDYANAIQQFNKIIGG 308

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
               S+N    YY +   Y ++ +            L       +      Y    +   
Sbjct: 309 TNSVSQN---AYYHLAECYLKLDKKP--------EALNAFRNASQM----EYTPEIQKDA 353

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
            +   +L+         Y     Y          L  Y   EH  E    LV++Y
Sbjct: 354 FLNYARLS---------YEIGNAYENVPSVLTNYLEKYPKDEHTTEIQELLVDSY 399


>gi|310792567|gb|EFQ28094.1| hypothetical protein GLRG_03238 [Glomerella graminicola M1.001]
          Length = 478

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/139 (10%), Positives = 36/139 (25%), Gaps = 23/139 (16%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
                     ++  A E + +    +   P      ++          A  Y  A +   
Sbjct: 13  NDGNKAFAAHDWPTAIELYTKAIELNDKEP-TFYTNRAQ-----ANIKAEAYGYAIADCT 66

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           + I   P+       Y+  G++    +R         K  +      +    N+     A
Sbjct: 67  KAIELNPKFVK---AYFRRGLAQTACLR--------PKDAVADFKECLRLDPNNK---DA 112

Query: 179 RFYVTVGRNQLAAKEVEIG 197
           +  +   +  +   +    
Sbjct: 113 KLKLDECKKIVRKLDFFAA 131


>gi|149173314|ref|ZP_01851945.1| O-linked GlcNAc transferase [Planctomyces maris DSM 8797]
 gi|148848120|gb|EDL62452.1| O-linked GlcNAc transferase [Planctomyces maris DSM 8797]
          Length = 316

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 60/184 (32%), Gaps = 13/184 (7%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK-SLLMSAFVQYSAGKYQQAASL 116
            E+Y++A    K +   KA E + +     P    A K + +  A   +   +Y +A   
Sbjct: 7   SELYQQARTLQKSREIVKAIEIYERILSIKP----AEKKAHVSIATAYFQLQQYPEAIKH 62

Query: 117 GEEYITQYP--ESKNVDY-VYYLVGMSYAQMIRDVPYD--QRATKLMLQYMSRIVERYTN 171
            EE     P   S  ++    Y   M   +   DV     Q+  K    + +  +     
Sbjct: 63  FEEMTRLAPMDASPYINMGAIYNR-MGEYKTALDVLRKAVQKDKKSADAFYNMGIAHKGL 121

Query: 172 SPY--VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
           +       A     V   Q+      +G  YL+   +  A   F   L      + A  A
Sbjct: 122 NQLSMAVTAYKQAIVINGQMVDAYFNLGNVYLEMKNHSQAHSSFTRALEISPGFKKARNA 181

Query: 230 MARL 233
           M  L
Sbjct: 182 MKIL 185


>gi|108563643|ref|YP_627959.1| paralysed flagella protein [Helicobacter pylori HPAG1]
 gi|107837416|gb|ABF85285.1| paralysed flagella protein [Helicobacter pylori HPAG1]
          Length = 801

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 49/137 (35%), Gaps = 9/137 (6%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             +T   Y    Y +A   +  Q +  A    ++  +++P     +   L+        G
Sbjct: 186 PLLTTKGYDLNAYLEAKKQMDSQAYFDALRTISRAFKNYPQTMFKKDLYLLEIIALGQLG 245

Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            K      +G ++I  YP   N+    Y V  +  +            K  ++Y  RI+ 
Sbjct: 246 IKKSLLIDIGTQWIKNYPTDPNIPEALYYVAKALDEN--------NNYKQAMRYYKRILL 297

Query: 168 RYTNSPYVKGARFYVTV 184
            Y NS Y   A+  + +
Sbjct: 298 EYKNSRYAPLAQMRLAI 314



 Score = 43.2 bits (101), Expect = 0.039,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 31/99 (31%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
             + RA   +    ++   + L I     +                +  TD      +Y 
Sbjct: 215 RTISRAFKNYPQTMFKKDLYLLEIIALGQLGIKKSLLIDIGTQWIKNYPTDPNIPEALYY 274

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
            A    +  N+ +A  Y+ +   ++  +  A  + +  A
Sbjct: 275 VAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRLA 313



 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 37/113 (32%), Gaps = 13/113 (11%)

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
           D +A    L+ +SR  + Y  + + K            +A  ++ I +  L        I
Sbjct: 206 DSQAYFDALRTISRAFKNYPQTMFKKD-----LYLLEIIALGQLGIKKSLL--------I 252

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
                 + NY    +  EA+  + +A        +A      I   Y    +A
Sbjct: 253 DIGTQWIKNYPTDPNIPEALYYVAKALDENNNYKQAMRYYKRILLEYKNSRYA 305


>gi|293609245|ref|ZP_06691547.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292827697|gb|EFF86060.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 291

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 41/120 (34%), Gaps = 17/120 (14%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG--EYVAA 209
           Q   K  +  M   ++ + NS Y   A F++                + L      Y  A
Sbjct: 186 QGGAKKAIAPMQNFIKNHPNSVYTGNAYFWL--------------AEFNLATDPVNYNEA 231

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVE-AYVALALMDEAREVVSLIQERYPQGYWARYVET 268
              + +V   Y ++  A  A+ +L   A         A +  + I  +YP+   A++   
Sbjct: 232 KKNYNVVATQYPNSSKAPRALYQLYSIAKDVDKNTVSANQYKAKILSQYPKSEEAKFFNK 291



 Score = 42.4 bits (99), Expect = 0.068,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 46/137 (33%), Gaps = 9/137 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           +S     +    V  ++  Y  A+   K+    KA        ++ P +     +    A
Sbjct: 158 ASSPATQNQSNPVELEKAAYTVALDAYKQGGAKKAIAPMQNFIKNHPNSVYTGNAYFWLA 217

Query: 102 FVQYSAG--KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
               +     Y +A        TQYP S       Y +      + +DV    + T    
Sbjct: 218 EFNLATDPVNYNEAKKNYNVVATQYPNSSKAPRALYQL----YSIAKDVD---KNTVSAN 270

Query: 160 QYMSRIVERYTNSPYVK 176
           QY ++I+ +Y  S   K
Sbjct: 271 QYKAKILSQYPKSEEAK 287



 Score = 38.6 bits (89), Expect = 0.87,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 31/79 (39%), Gaps = 8/79 (10%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR-DVPYDQRATKLMLQYMS 163
           Y  G  ++A +  + +I  +P S     VY   G +Y  +   ++  D        +  +
Sbjct: 184 YKQGGAKKAIAPMQNFIKNHPNS-----VY--TGNAYFWLAEFNLATDPVNYNEAKKNYN 236

Query: 164 RIVERYTNSPYVKGARFYV 182
            +  +Y NS     A + +
Sbjct: 237 VVATQYPNSSKAPRALYQL 255


>gi|256823063|ref|YP_003147026.1| tol-pal system protein YbgF [Kangiella koreensis DSM 16069]
 gi|256796602|gb|ACV27258.1| tol-pal system protein YbgF [Kangiella koreensis DSM 16069]
          Length = 243

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 50/141 (35%), Gaps = 23/141 (16%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           A+++    AF  ++  KY QA S  + +++ YP+       +YL+G  +           
Sbjct: 123 AQQA-YNQAFTLFNEQKYPQAKSAFKTFVSDYPKDSLASNAHYLLGQLHFSD-------- 173

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           +           + E++ ++     A   +   +                +G+  AA   
Sbjct: 174 KEYAEAENQFKAVYEQFPDTSIKDKAMLKLAQVQEL--------------KGDKAAAKAT 219

Query: 213 FQLVLANYSDAEHAEEAMARL 233
           +Q V   + +      A A+L
Sbjct: 220 YQQVSKLFPNTTAGRLAKAKL 240



 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 31/88 (35%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
            + + +    D   D       Y    L   ++ +++A   F      FP   +  K++L
Sbjct: 142 AKSAFKTFVSDYPKDSLASNAHYLLGQLHFSDKEYAEAENQFKAVYEQFPDTSIKDKAML 201

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPE 126
             A VQ   G    A +  ++    +P 
Sbjct: 202 KLAQVQELKGDKAAAKATYQQVSKLFPN 229



 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 57/144 (39%), Gaps = 8/144 (5%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           SS +    +       ++ Y +A     EQ + +A   F     D+P   +A  +  +  
Sbjct: 108 SSDNANTSNNGASNRAQQAYNQAFTLFNEQKYPQAKSAFKTFVSDYPKDSLASNAHYLLG 167

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
            + +S  +Y +A +  +    Q+P++   D       M     ++++  D+ A K   Q 
Sbjct: 168 QLHFSDKEYAEAENQFKAVYEQFPDTSIKD-----KAMLKLAQVQELKGDKAAAKATYQ- 221

Query: 162 MSRIVERYTNSPYVKGARFYVTVG 185
             ++ + + N+   + A+  +   
Sbjct: 222 --QVSKLFPNTTAGRLAKAKLDTL 243



 Score = 43.6 bits (102), Expect = 0.033,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 40/116 (34%), Gaps = 8/116 (6%)

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV--TVGRNQLAAK-EVEIGRYYLKRG 204
               Q+A        +   ++Y      K A         ++ LA+     +G+ +    
Sbjct: 120 SNRAQQAYNQAFTLFNE--QKYPQ---AKSAFKTFVSDYPKDSLASNAHYLLGQLHFSDK 174

Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           EY  A  +F+ V   + D    ++AM +L +          A+     + + +P  
Sbjct: 175 EYAEAENQFKAVYEQFPDTSIKDKAMLKLAQVQELKGDKAAAKATYQQVSKLFPNT 230


>gi|197117672|ref|YP_002138099.1| type II secretion system secretin lipoprotein PulQ [Geobacter
           bemidjiensis Bem]
 gi|197087032|gb|ACH38303.1| type II secretion system secretin lipoprotein PulQ [Geobacter
           bemidjiensis Bem]
          Length = 868

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 59/198 (29%), Gaps = 42/198 (21%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +++  L +   +    L G                    R  + KA    +E N   A  
Sbjct: 1   MHRPRLILTVMLVALALSGCTSG----------------RTAFSKAEKLEREGNLDAALV 44

Query: 79  YFNQCSRDFP-FAGVARKSLLMS----AFVQYSAGK-------YQQAASLGEEYITQY-- 124
            + + +   P       K LL      A   +  G+       Y +A     E+ + Y  
Sbjct: 45  KYAEVAAANPDIGEYRVK-LLNVTETAARAHFKKGEEFFAKKNYDEAL---REFQSAYAM 100

Query: 125 -PES----KNVDYVYYLV-GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            P         D V  L    +Y Q   D   +++  +  +      +E   ++  VK  
Sbjct: 101 DPTHVLAKNQADQVLKLRNAQTYLQEGLDFEKNRKP-REAMIAFKHALEFDPSNKEVKEG 159

Query: 179 RFYVTV-GRNQLAAKEVE 195
              +    R +L   E+ 
Sbjct: 160 LDRIIANKRQKLDGFELN 177


>gi|110639871|ref|YP_680081.1| hypothetical protein CHU_3505 [Cytophaga hutchinsonii ATCC 33406]
 gi|110282552|gb|ABG60738.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 602

 Score = 47.0 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 55/144 (38%), Gaps = 10/144 (6%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
           + +  LDS TD       Y    L L ++ + +A +  N   + +P   +      + A 
Sbjct: 465 TENSGLDSTTDALKD---YSAIQLLLFQRKYDEALQAANALLKQYPHHELTDDVYWLQAT 521

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
           +    GK  +A  + ++  T Y +    D              +   YD + T+  +Q  
Sbjct: 522 ILRQTGKPTEALEMLKKISTGYADDLLGDDAL-------FTSAQIFDYDLKNTEKAMQLY 574

Query: 163 SRIVERYTNSPYVKGARFYVTVGR 186
              + +YTNS YV  AR    + R
Sbjct: 575 QDFLIQYTNSVYVTEARKRFRILR 598


>gi|255531102|ref|YP_003091474.1| tetratricopeptide domain-containing protein [Pedobacter heparinus
           DSM 2366]
 gi|255344086|gb|ACU03412.1| Tetratricopeptide domain protein [Pedobacter heparinus DSM 2366]
          Length = 208

 Score = 47.0 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 51/166 (30%), Gaps = 22/166 (13%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
            +  + + ++  A     +       +      L M  +  +  G ++ +       IT 
Sbjct: 30  GMQAMMKGDYKVAVNQLEKADAK---SPNNAAVLKMLGYSYFQCGDFENSIKTYSNLITL 86

Query: 124 YPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKL-----MLQYMSRIVERYTNSPYVKG 177
            P     DY  YY  G +   +  D        +       ++   + +E   N      
Sbjct: 87  KPS----DYSAYYYRGKARQNVANDPKESLNNLRENFYLAAIKDFGKAIEI--NGEEDPQ 140

Query: 178 ARFYVTVGRNQLAAKEVEIGRYY-LKRGEYVAA-IPRFQLVLANYS 221
                      LA K+  I + Y +K     AA I  F   +A++ 
Sbjct: 141 LLQ-----NRALAYKDYAIYKSYKIKTKAEKAACIALFNNSIADFQ 181


>gi|90022602|ref|YP_528429.1| cellulose binding, type IV [Saccharophagus degradans 2-40]
 gi|89952202|gb|ABD82217.1| Tetratricopeptide TPR_2 [Saccharophagus degradans 2-40]
          Length = 952

 Score = 47.0 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/244 (12%), Positives = 83/244 (34%), Gaps = 40/244 (16%)

Query: 45  DVYLDSVTDVRYQRE-VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           +  L+   +     E +Y+ A  +  E    KA     + +   P+     ++    A +
Sbjct: 106 EKILEKYPNSPDNAEVLYQLAKAYDMEGEQEKALRMLTELTSKHPYYPNLAEAWFRVADI 165

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
            +S  +Y QA    ++       +  V+  +Y++G ++ +  +         +  L   +
Sbjct: 166 HFSNQRYDQAKHAYQQVTHLNTGTLWVN-AHYMLGWTHYKQFQ--------YEKSLDSYA 216

Query: 164 RIVERYTNSPYVKGARFY------------VTVGRNQLAAKEV----------------- 194
            ++  Y                        +++  ++LA  E                  
Sbjct: 217 NVLNTYLAGKESAEGLGKAEKPVVEDTLHSISLSLDKLAGAETIPNVPGLVGRSYVWMLY 276

Query: 195 -EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            ++G +YL++  +  A+  ++  +     ++ A      ++ A++       A E  +L 
Sbjct: 277 KKLGDFYLEKELFGEAVNSYRAYIDANPSSQRAPVFHNMVINAHIKGGFPALALEEKALY 336

Query: 254 QERY 257
            + Y
Sbjct: 337 VKAY 340



 Score = 43.6 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 57/164 (34%), Gaps = 19/164 (11%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           ++     + DV     V+ +     K+  + +A + + +    +P +    + L   A  
Sbjct: 69  KEQIERRIADVYMMESVHTQHQDVEKKSYYLEAIKEYEKILEKYPNSPDNAEVLYQLAKA 128

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
               G+ ++A  +  E  +++P   N+   ++ V   +    R   YDQ   K   Q ++
Sbjct: 129 YDMEGEQEKALRMLTELTSKHPYYPNLAEAWFRVADIHFSNQR---YDQ--AKHAYQQVT 183

Query: 164 RIV--------------ERYTNSPYVKGARFYVTVGRNQLAAKE 193
            +                 Y    Y K    Y  V    LA KE
Sbjct: 184 HLNTGTLWVNAHYMLGWTHYKQFQYEKSLDSYANVLNTYLAGKE 227



 Score = 43.6 bits (102), Expect = 0.033,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 30/57 (52%)

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           K+  Y+ AI  ++ +L  Y ++    E + +L +AY      ++A  +++ +  ++P
Sbjct: 94  KKSYYLEAIKEYEKILEKYPNSPDNAEVLYQLAKAYDMEGEQEKALRMLTELTSKHP 150


>gi|311695031|gb|ADP97904.1| tetratricopeptide TPR_2 repeat protein [marine bacterium HP15]
          Length = 947

 Score = 47.0 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 65/229 (28%), Gaps = 46/229 (20%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSR 85
            F +    L   +   +            Y+  VY++ + L L+ + +S A + F     
Sbjct: 257 LFRVVGLSLSYLDGAETLQALFRQTGGRPYEILVYDRYSELLLEREQYSDAIDVFEAYIE 316

Query: 86  DFPFAGVARK-------------------------SLLMSAFVQYSAGKYQQAASLGEEY 120
           D P +  A +                           L   +  Y       A    E+ 
Sbjct: 317 DHPESPWAPRYHIRIIDTLELAGFTRTIPERKAGFVSLYGIYSDYWQSAGPDAIGFIEQ- 375

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
                    +    YL+     +   D   D    +    Y +     + + P       
Sbjct: 376 -QLEQLLPELADRQYLLA---GEAEDDQQAD-DHYRKAASYYAEFAATFPDHPRTPE--- 427

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
            + +            G  YL+  ++ AAI  F+ V  +Y +   A+ A
Sbjct: 428 RLFLL-----------GETYLELEDWPAAIAAFERVAYDYPEDTVADRA 465



 Score = 44.0 bits (103), Expect = 0.022,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 33/74 (44%), Gaps = 8/74 (10%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +   A    +  +++YPE +  D +YY +  ++            AT   L+ ++ +V 
Sbjct: 105 DELSGAIDAYQRLLSEYPEREGNDQIYYQLARAWELR--------GATPQQLEALNTLVR 156

Query: 168 RYTNSPYVKGARFY 181
           RY +S Y   A+F 
Sbjct: 157 RYPDSEYWVEAQFR 170



 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 46/160 (28%), Gaps = 11/160 (6%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +Y  A  + E YI  +PES       Y + +     +          K     +  I  
Sbjct: 302 EQYSDAIDVFEAYIEDHPESPWAP--RYHIRIIDTLELAGFTRTIPERKAGFVSLYGIYS 359

Query: 168 RYTNSPYVKGA----RFYVTVGRNQLAAKEVEIG----RYYLKRGEYVAAIPRFQLVLAN 219
            Y  S     A       +     +LA ++  +             Y  A   +    A 
Sbjct: 360 DYWQSA-GPDAIGFIEQQLEQLLPELADRQYLLAGEAEDDQQADDHYRKAASYYAEFAAT 418

Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           + D     E +  L E Y+ L     A      +   YP+
Sbjct: 419 FPDHPRTPERLFLLGETYLELEDWPAAIAAFERVAYDYPE 458



 Score = 35.9 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 64/206 (31%), Gaps = 23/206 (11%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
           + D    S         VY +A       N   A   F +     P + +   +   +A 
Sbjct: 586 AEDDERRSGVRENLAAAVYRQAEQLADAGNVEAAVSEFLRVGTAVPESALRANAEYDAAS 645

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
           +  +A  ++QA  +   +   +P  + +D V   + ++Y         +    +     +
Sbjct: 646 LLITANLWEQAIGVLTSFRRSFPNHELIDTVPAKLALAY--------RETEQWERAADEL 697

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
            ++V         K         R  L    +     Y + G    AI  ++    ++ +
Sbjct: 698 QQMVSL------AKTPEER----RENL----LIAAELYDQAGNREKAIDTWRNYANSHPE 743

Query: 223 -AEHAEEAMARLVEAYVALALMDEAR 247
             +   EA  RL E Y      +   
Sbjct: 744 PTDVYMEAANRLAELYQEDGDAESRD 769


>gi|261400856|ref|ZP_05986981.1| putative periplasmic protein [Neisseria lactamica ATCC 23970]
 gi|269209327|gb|EEZ75782.1| putative periplasmic protein [Neisseria lactamica ATCC 23970]
          Length = 237

 Score = 47.0 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 44/130 (33%), Gaps = 11/130 (8%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S   V   + +Y +A+   +   FS A               +A++S+ +    +   G 
Sbjct: 111 SAHTVETAQNLYNQALKHYQSGRFSAAAALLKGADGGD-GGSIAQRSMYLLLQSRARMGN 169

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVER 168
            +    +G  Y  ++ +S       + +G    +   +D+                +++ 
Sbjct: 170 CESVIEIGGRYANRFKDSPTAPEAMFKIGECQYRLQQKDIAR---------ATWRSLIQT 220

Query: 169 YTNSPYVKGA 178
           Y  SP  K A
Sbjct: 221 YPGSPAAKRA 230



 Score = 38.9 bits (90), Expect = 0.72,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 7/57 (12%)

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
             RF+       D+  A EAM ++ E    L   D AR     + + YP    A+  
Sbjct: 181 ANRFK-------DSPTAPEAMFKIGECQYRLQQKDIARATWRSLIQTYPGSPAAKRA 230


>gi|149918743|ref|ZP_01907230.1| hypothetical protein PPSIR1_31713 [Plesiocystis pacifica SIR-1]
 gi|149820344|gb|EDM79760.1| hypothetical protein PPSIR1_31713 [Plesiocystis pacifica SIR-1]
          Length = 304

 Score = 47.0 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/120 (13%), Positives = 34/120 (28%), Gaps = 4/120 (3%)

Query: 5   LGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKA 64
           L   I         L   A  +   + +C         +     + +   +   +VY + 
Sbjct: 7   LLLTIDPRPLHERALDTGARLLAAGVCLCLASAPLPALAAPAEDEGIDTEKKAMDVYNQG 66

Query: 65  VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
                  ++ +A + F +    FP                 S   ++QA    + Y+  Y
Sbjct: 67  KEAYDSGDYDEALQLFLEAQSLFPSPVF----HYNIGLCHESLENFEQAIISYKAYLRSY 122


>gi|296132638|ref|YP_003639885.1| Tetratricopeptide TPR_2 repeat protein [Thermincola sp. JR]
 gi|296031216|gb|ADG81984.1| Tetratricopeptide TPR_2 repeat protein [Thermincola potens JR]
          Length = 217

 Score = 47.0 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 44/123 (35%), Gaps = 14/123 (11%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           +   + + + +N+ KA        ++ PF  +     +    +     K+QQA  + E  
Sbjct: 107 FNLGLAYKETKNYDKAITLMEGIVKENPFHFLGI---VNLGVLYDQKNKFQQALQMYERA 163

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +   P       VY L G +YA M           +  L+ +++ +    +      A+ 
Sbjct: 164 LQINPG---AADVYLLRGQTYAHM--------GDKQKALENINQALRFVPDYKEALDAKK 212

Query: 181 YVT 183
            + 
Sbjct: 213 EIE 215


>gi|261416282|ref|YP_003249965.1| TPR repeat-containing protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261372738|gb|ACX75483.1| TPR repeat-containing protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 1292

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 66/215 (30%), Gaps = 38/215 (17%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +++KA   +K        + +    + +P   +A K++  +A    +  +Y++A    E 
Sbjct: 662 LFQKAESSVKAGKNEAGAKAYLDLVKRYPNIDIADKAIFEAAAAYEATNQYKKA---AET 718

Query: 120 YITQYPESKNVDYVY-------YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           ++   P+S    Y          L   S  +  +             +    I + +   
Sbjct: 719 FMLL-PKS----YAKSPLTVKGILRAASNYKKDKQPV-------QAAKTFLFITDNFPQ- 765

Query: 173 PYVKGARFYVTVGRNQLAAKEV-EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
                         + +A   +    + Y    +   A   F+L    Y   E     + 
Sbjct: 766 --------------DSMAFSAIGFAAQTYDSIPDKKQAAITFELAYKRYPQNEETPSFLY 811

Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
               +Y    + +EA      +   YP+  +A   
Sbjct: 812 SACLSYDEAKMTNEAIRCSKDLVRDYPKSSYAVDA 846



 Score = 45.5 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 32/234 (13%), Positives = 70/234 (29%), Gaps = 60/234 (25%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
             + ++E A  +     + KA E F    + +  + +  K +L +A       +  QAA 
Sbjct: 695 ADKAIFEAAAAYEATNQYKKAAETFMLLPKSYAKSPLTVKGILRAASNYKKDKQPVQAAK 754

Query: 116 LG----EEY---------------------------------ITQYPESKNVDYVYYLVG 138
                 + +                                   +YP+++      Y   
Sbjct: 755 TFLFITDNFPQDSMAFSAIGFAAQTYDSIPDKKQAAITFELAYKRYPQNEETPSFLYSAC 814

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           +SY +         + T   ++    +V  Y  S Y   A F + +              
Sbjct: 815 LSYDEA--------KMTNEAIRCSKDLVRDYPKSSYAVDAAFSIPMA------------- 853

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR-LVEAYVALALMDEAREVVS 251
            Y    ++  AI  ++  +  Y + +    A    +  AY  +  M+ + +   
Sbjct: 854 -YANAKKWDLAIQEYRNFIKMYQEDKEKLIAAYIGIARAYRNVKDMESSVDAYK 906



 Score = 41.3 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 39/115 (33%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
             +      +Y   + + + +  ++A        RD+P +  A  +         +A K+
Sbjct: 801 PQNEETPSFLYSACLSYDEAKMTNEAIRCSKDLVRDYPKSSYAVDAAFSIPMAYANAKKW 860

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
             A      +I  Y E K      Y+      + ++D+     A K  L+   + 
Sbjct: 861 DLAIQEYRNFIKMYQEDKEKLIAAYIGIARAYRNVKDMESSVDAYKKTLEAYDKY 915



 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 58/210 (27%), Gaps = 34/210 (16%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDF---PFAGVARKSLLMSAFVQ---------YSAGKYQ 111
           A   L+     ++   F    + +        +  + +  A              AGK +
Sbjct: 617 AQSLLESNQLDESLTEFEWLLKQYKAKETRNDSMAAEIEKAIAYVLFQKAESSVKAGKNE 676

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
             A    + + +YP     D   +    +Y    +         K   +    + + Y  
Sbjct: 677 AGAKAYLDLVKRYPNIDIADKAIFEAAAAYEATNQ--------YKKAAETFMLLPKSYAK 728

Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
           SP                          Y K  + V A   F  +  N+     A  A+ 
Sbjct: 729 SPLTVKGILR--------------AASNYKKDKQPVQAAKTFLFITDNFPQDSMAFSAIG 774

Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGY 261
              + Y ++    +A     L  +RYPQ  
Sbjct: 775 FAAQTYDSIPDKKQAAITFELAYKRYPQNE 804



 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 35/96 (36%), Gaps = 5/96 (5%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
             + +    +Y+ A +        KAY+   Q  RDFP  G+  K+ L  A   +   K+
Sbjct: 168 PKEAKAPTVIYQAAAVQEASGEDDKAYKLRMQLVRDFPDNGLVPKAWLRIAEYHFMNRKF 227

Query: 111 QQAASLGEE---YITQYPESKNVDYVYYLVGMSYAQ 143
           + A    ++   +       K      Y +  SY  
Sbjct: 228 KDAIGAYKKVTGFENL--TGKEAALAMYHLAESYYN 261



 Score = 36.2 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 56/187 (29%), Gaps = 40/187 (21%)

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
            +Q++     EYI +YP+      V Y           D            +   ++V  
Sbjct: 152 DHQKSLGYFLEYIDKYPKEAKAPTVIYQAAAVQEASGED--------DKAYKLRMQLVRD 203

Query: 169 YTNSPYVKGARFYVTV-------------------GRNQLAAKE-----VEIGRYYLKRG 204
           + ++  V  A   +                     G   L  KE       +   Y    
Sbjct: 204 FPDNGLVPKAWLRIAEYHFMNRKFKDAIGAYKKVTGFENLTGKEAALAMYHLAESYYNTA 263

Query: 205 EY-VAAIPRFQLVL----ANYSDAEHAEEAMARLVEAYVAL--ALMDEAREVVSLIQERY 257
           EY +AA   F  ++      Y + +   EAM  +  ++  L    + EA   +   +  +
Sbjct: 264 EYEIAAKQYFDYIVGADKGKYPN-DLRAEAMDFMAASFSDLEGGGVQEAEAFLRDKKVPF 322

Query: 258 PQGYWAR 264
               + R
Sbjct: 323 KDSVYYR 329


>gi|149921540|ref|ZP_01909991.1| hypothetical protein PPSIR1_19609 [Plesiocystis pacifica SIR-1]
 gi|149817615|gb|EDM77083.1| hypothetical protein PPSIR1_19609 [Plesiocystis pacifica SIR-1]
          Length = 280

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 50/145 (34%), Gaps = 8/145 (5%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
           + S               E+  +A    +    +KA   + +   +FP +  A  SL+  
Sbjct: 143 KPSPQAKASPGLSPASAAELLRRATQARRSGEAAKAVALYERLVAEFPDSREAALSLVAR 202

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
             ++ S  +   A    E Y+ + PE          VG++ +  +     D    +   Q
Sbjct: 203 GKLELSRERPGAARLAFERYLGEQPEGVLAPEA--RVGVAESHALDG---DPSKERAAWQ 257

Query: 161 YMSRIVERYTNSPYVKGARFYVTVG 185
               +V+ +  S YV  AR  +   
Sbjct: 258 A---VVDHHPRSVYVGKARARLEAL 279


>gi|327399453|ref|YP_004340322.1| hypothetical protein Hipma_1305 [Hippea maritima DSM 10411]
 gi|327182082|gb|AEA34263.1| Tetratricopeptide TPR_1 repeat-containing protein [Hippea maritima
           DSM 10411]
          Length = 697

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 48/155 (30%), Gaps = 15/155 (9%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           S             Y   ++   +     +N+  A  +F +    +P +     +  +  
Sbjct: 101 SENTFSPAQKFKQTYDETLFFSGIRAFYIKNYRLAAAFFKEIVTKYPSSSFFINAYFLLG 160

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
               +  +Y +A     E I   P++  V    +         I D+   ++        
Sbjct: 161 DCYKNIKEYDKAIKTYNEAIHFAPKNSAVAQTLF--------SIADIYEKKKMFMSARNI 212

Query: 162 MSRIVERYTNSPYVKGARFYVTV-------GRNQL 189
             RIV+ Y ++ +   A F +          RN L
Sbjct: 213 YKRIVKEYADTKWSYQAEFMLGYSYYKENRCRNAL 247



 Score = 41.3 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 38/118 (32%), Gaps = 14/118 (11%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           +  +L   +   IV +Y +S +   A                 +G  Y    EY  AI  
Sbjct: 130 KNYRLAAAFFKEIVTKYPSSSFFINAY--------------FLLGDCYKNIKEYDKAIKT 175

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
           +   +          + +  + + Y    +   AR +   I + Y    W+   E ++
Sbjct: 176 YNEAIHFAPKNSAVAQTLFSIADIYEKKKMFMSARNIYKRIVKEYADTKWSYQAEFML 233



 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 66/216 (30%), Gaps = 51/216 (23%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A  F++  N  +A +  N+  +  P+        ++   + Y  G Y +A          
Sbjct: 523 AKYFVEMGNNMRALDVMNKLPQQKPYNNYTD---MIFGDINYYNGDYNKA---------- 569

Query: 124 YPESKNVDYVYYLVGMSYAQ---------MIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
                   Y +Y   +   Q          I  V Y  +  K     +S+IV +     Y
Sbjct: 570 --------YEFYQKALETKQPLMADYLRLRIARVLYHMKKYKEAENILSKIVAK----IY 617

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
                +   +                 K   Y  AI     V  N    +  E+ +    
Sbjct: 618 SDEVTYLKGLCE--------------YKLNHYKDAIEILSNVENN---LKFKEKVLFYKA 660

Query: 235 EAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
             Y+ L    +ARE    ++  YP   +   ++ L+
Sbjct: 661 LGYLKLGNTKKAREAYDNLKRTYPHSDYVNILKALL 696


>gi|156072334|gb|ABU45489.1| TPR domain protein [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|302325631|gb|ADL24832.1| tetratricopeptide repeat protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 1292

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 66/215 (30%), Gaps = 38/215 (17%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +++KA   +K        + +    + +P   +A K++  +A    +  +Y++A    E 
Sbjct: 662 LFQKAESSVKAGKNEAGAKAYLDLVKRYPNIDIADKAIFEAAAAYEATNQYKKA---AET 718

Query: 120 YITQYPESKNVDYVY-------YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           ++   P+S    Y          L   S  +  +             +    I + +   
Sbjct: 719 FMLL-PKS----YAKSPLTVKGILRAASNYKKDKQPV-------QAAKTFLFITDNFPQ- 765

Query: 173 PYVKGARFYVTVGRNQLAAKEV-EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
                         + +A   +    + Y    +   A   F+L    Y   E     + 
Sbjct: 766 --------------DSMAFSAIGFAAQTYDSIPDKKQAAITFELAYKRYPQNEETPSFLY 811

Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
               +Y    + +EA      +   YP+  +A   
Sbjct: 812 SACLSYDEAKMTNEAIRCSKDLVRDYPKSSYAVDA 846



 Score = 45.5 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 32/234 (13%), Positives = 70/234 (29%), Gaps = 60/234 (25%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
             + ++E A  +     + KA E F    + +  + +  K +L +A       +  QAA 
Sbjct: 695 ADKAIFEAAAAYEATNQYKKAAETFMLLPKSYAKSPLTVKGILRAASNYKKDKQPVQAAK 754

Query: 116 LG----EEY---------------------------------ITQYPESKNVDYVYYLVG 138
                 + +                                   +YP+++      Y   
Sbjct: 755 TFLFITDNFPQDSMAFSAIGFAAQTYDSIPDKKQAAITFELAYKRYPQNEETPSFLYSAC 814

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           +SY +         + T   ++    +V  Y  S Y   A F + +              
Sbjct: 815 LSYDEA--------KMTNEAIRCSKDLVRDYPKSSYAVDAAFSIPMA------------- 853

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR-LVEAYVALALMDEAREVVS 251
            Y    ++  AI  ++  +  Y + +    A    +  AY  +  M+ + +   
Sbjct: 854 -YANAKKWDLAIQEYRNFIKMYQEDKEKLIAAYIGIARAYRNVKDMESSVDAYK 906



 Score = 41.3 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 39/115 (33%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
             +      +Y   + + + +  ++A        RD+P +  A  +         +A K+
Sbjct: 801 PQNEETPSFLYSACLSYDEAKMTNEAIRCSKDLVRDYPKSSYAVDAAFSIPMAYANAKKW 860

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
             A      +I  Y E K      Y+      + ++D+     A K  L+   + 
Sbjct: 861 DLAIQEYRNFIKMYQEDKEKLIAAYIGIARAYRNVKDMESSVDAYKKTLEAYDKY 915



 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 58/210 (27%), Gaps = 34/210 (16%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDF---PFAGVARKSLLMSAFVQ---------YSAGKYQ 111
           A   L+     ++   F    + +        +  + +  A              AGK +
Sbjct: 617 AQSLLESNQLDESLTEFEWLLKQYKAKETRNDSMAAEIEKAIAYVLFQKAESSVKAGKNE 676

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
             A    + + +YP     D   +    +Y    +         K   +    + + Y  
Sbjct: 677 AGAKAYLDLVKRYPNIDIADKAIFEAAAAYEATNQ--------YKKAAETFMLLPKSYAK 728

Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
           SP                          Y K  + V A   F  +  N+     A  A+ 
Sbjct: 729 SPLTVKGILR--------------AASNYKKDKQPVQAAKTFLFITDNFPQDSMAFSAIG 774

Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGY 261
              + Y ++    +A     L  +RYPQ  
Sbjct: 775 FAAQTYDSIPDKKQAAITFELAYKRYPQNE 804



 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 35/96 (36%), Gaps = 5/96 (5%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
             + +    +Y+ A +        KAY+   Q  RDFP  G+  K+ L  A   +   K+
Sbjct: 168 PKEAKAPTVIYQAAAVQEASGEDDKAYKLRMQLVRDFPDNGLVPKAWLRIAEYHFMNRKF 227

Query: 111 QQAASLGEE---YITQYPESKNVDYVYYLVGMSYAQ 143
           + A    ++   +       K      Y +  SY  
Sbjct: 228 KDAIGAYKKVTGFENL--TGKEAALAMYHLAESYYN 261



 Score = 36.2 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 56/187 (29%), Gaps = 40/187 (21%)

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
            +Q++     EYI +YP+      V Y           D            +   ++V  
Sbjct: 152 DHQKSLGYFLEYIDKYPKEAKAPTVIYQAAAVQEASGED--------DKAYKLRMQLVRD 203

Query: 169 YTNSPYVKGARFYVTV-------------------GRNQLAAKE-----VEIGRYYLKRG 204
           + ++  V  A   +                     G   L  KE       +   Y    
Sbjct: 204 FPDNGLVPKAWLRIAEYHFMNRKFKDAIGAYKKVTGFENLTGKEAALAMYHLAESYYNTA 263

Query: 205 EY-VAAIPRFQLVL----ANYSDAEHAEEAMARLVEAYVAL--ALMDEAREVVSLIQERY 257
           EY +AA   F  ++      Y + +   EAM  +  ++  L    + EA   +   +  +
Sbjct: 264 EYEIAAKQYFDYIVGADKGKYPN-DLRAEAMDFMAASFSDLEGGGVQEAEAFLRDKKVPF 322

Query: 258 PQGYWAR 264
               + R
Sbjct: 323 KDSVYYR 329


>gi|297748677|gb|ADI51223.1| Tetratricopeptide repeat family protein [Chlamydia trachomatis
           D-EC]
 gi|297749557|gb|ADI52235.1| Tetratricopeptide repeat family protein [Chlamydia trachomatis
           D-LC]
          Length = 339

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 50/165 (30%), Gaps = 22/165 (13%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
            ++   S         +Y K  L    + +S+A +   + S  FP   ++ +S  + A +
Sbjct: 179 EEIVTASSDADLKASALYAKGALLFDRKEYSEAIKTLKKVSLQFPSHSLSPESFTLIAKI 238

Query: 104 Q--------YSAGKYQQAASLGEEYITQYPESK----------NVDYVYYLVGMSYAQMI 145
                    Y+    Q A         Q+P             ++   Y           
Sbjct: 239 HCLQALQEPYNEQYLQDARMNAAALRKQHPNHPSNTEVENYIHHMCEAY---ASCLYSTG 295

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
           R     +R       Y S  +E + ++ YV      +     Q++
Sbjct: 296 RFYEK-KRKASSAKIYYSIALENFPDTSYVAKCNKRLERLSKQMS 339



 Score = 44.3 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 56/149 (37%), Gaps = 6/149 (4%)

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
            A+ +LL      +   +Y +A    ++   Q+P        + L+   +       PY+
Sbjct: 196 YAKGALL------FDRKEYSEAIKTLKKVSLQFPSHSLSPESFTLIAKIHCLQALQEPYN 249

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           ++  +      + + +++ N P       Y+       A+     GR+Y K+ +  +A  
Sbjct: 250 EQYLQDARMNAAALRKQHPNHPSNTEVENYIHHMCEAYASCLYSTGRFYEKKRKASSAKI 309

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVAL 240
            + + L N+ D  +  +   RL      +
Sbjct: 310 YYSIALENFPDTSYVAKCNKRLERLSKQM 338



 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 82/261 (31%), Gaps = 43/261 (16%)

Query: 23  ALTIFFSI-AVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYF 80
           AL +F  +   C+      +  R     +    ++  E+Y E    + + + F +A   F
Sbjct: 28  ALCLFLVLPCGCYARVPSFEPFRGAIAPNRYTPKHSPELYFEMGDKYFQAKKFKQALLCF 87

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY------VY 134
              +  FP   +  K+  +        G    A     +Y        + +Y      + 
Sbjct: 88  GMITHHFPEHALHPKAQFLVGLCYLEMGHPDLADKALTQYQEL----ADTEYSEQLFAIK 143

Query: 135 YLVGMSYAQMIR-------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           Y +  S+A   R         P   +A    L+    IV   ++       +      + 
Sbjct: 144 YSIAQSFANGKRKNIVPLEGFPKLLKADTDALRIFEEIVTASSD----ADLKASALYAKG 199

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA---------MARLVEAYV 238
            L             R EY  AI   + V   +     + E+         +  L E Y 
Sbjct: 200 ALL----------FDRKEYSEAIKTLKKVSLQFPSHSLSPESFTLIAKIHCLQALQEPYN 249

Query: 239 ALALMDEAREVVSLIQERYPQ 259
               + +AR   + +++++P 
Sbjct: 250 E-QYLQDARMNAAALRKQHPN 269


>gi|193077557|gb|ABO12391.2| putative signal peptide [Acinetobacter baumannii ATCC 17978]
          Length = 294

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 42/120 (35%), Gaps = 17/120 (14%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG--EYVAA 209
           Q   K  +  M   ++ + NS Y   A F++                ++L      Y  A
Sbjct: 189 QGGAKKAIAPMQNFIKNHPNSIYTGNAYFWL--------------AEFHLATDPVNYNEA 234

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVE-AYVALALMDEAREVVSLIQERYPQGYWARYVET 268
              + +V   Y ++  A  A+ +L   A         A +  + +  +YP+   A++   
Sbjct: 235 KKNYNVVANQYPNSSKAPRALYQLYSIAKDVDKNTVSANQYKNKLLSQYPKSEEAKFFNK 294



 Score = 44.3 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 41/122 (33%), Gaps = 9/122 (7%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG--KYQQAA 114
           ++  Y  A+   K+    KA        ++ P +     +    A    +     Y +A 
Sbjct: 176 EKAAYTVALDAYKQGGAKKAIAPMQNFIKNHPNSIYTGNAYFWLAEFHLATDPVNYNEAK 235

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
                   QYP S       Y +      + +DV    + T    QY ++++ +Y  S  
Sbjct: 236 KNYNVVANQYPNSSKAPRALYQL----YSIAKDVD---KNTVSANQYKNKLLSQYPKSEE 288

Query: 175 VK 176
            K
Sbjct: 289 AK 290



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 28/79 (35%), Gaps = 8/79 (10%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR-DVPYDQRATKLMLQYMS 163
           Y  G  ++A +  + +I  +P S          G +Y  +    +  D        +  +
Sbjct: 187 YKQGGAKKAIAPMQNFIKNHPNSIYT-------GNAYFWLAEFHLATDPVNYNEAKKNYN 239

Query: 164 RIVERYTNSPYVKGARFYV 182
            +  +Y NS     A + +
Sbjct: 240 VVANQYPNSSKAPRALYQL 258


>gi|319953427|ref|YP_004164694.1| tetratricopeptide tpr_1 repeat-containing protein [Cellulophaga
           algicola DSM 14237]
 gi|319422087|gb|ADV49196.1| Tetratricopeptide TPR_1 repeat-containing protein [Cellulophaga
           algicola DSM 14237]
          Length = 594

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 45/133 (33%), Gaps = 7/133 (5%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
            +   ++Y KA L   ++   +A        +D     +  ++LL    +      + +A
Sbjct: 464 TQTALKIYAKADLLAYQKKNKEAIATLELILKDHKGEKIEDEALLKQGQLLEKLNDFDRA 523

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
               ++ I  Y      D  Y+ +   Y     ++       +   +   +I+  Y +S 
Sbjct: 524 KFNYQKIIEFYGNDILADDAYFAIAQLYENQFNNI-------EKAKESYEKIIYNYQDSY 576

Query: 174 YVKGARFYVTVGR 186
           Y   AR      R
Sbjct: 577 YFPQARKNFRRLR 589



 Score = 42.0 bits (98), Expect = 0.077,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 20/54 (37%), Gaps = 5/54 (9%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKYQQA 113
           Y  A  +L +  F KA  YF +  +  P+ +  +               +Y+ A
Sbjct: 21  YNLAKQYLNDGEFEKAVVYFEKLVKQNPYRSDYSE----DLIACYQQLERYEDA 70


>gi|332298199|ref|YP_004440121.1| hypothetical protein Trebr_1567 [Treponema brennaborense DSM 12168]
 gi|332181302|gb|AEE16990.1| hypothetical protein Trebr_1567 [Treponema brennaborense DSM 12168]
          Length = 622

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 41/105 (39%), Gaps = 18/105 (17%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
           LL  A V Y AG+ ++AA L + +        ++D   +L G  Y         D +  +
Sbjct: 533 LLEQAQVAYDAGECEKAALLLDTFFAA--AGTDIDRALFLQGQVYEAQS-----DIKNIR 585

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
             +   +++V+ Y  S   + A+  VT              R+Y 
Sbjct: 586 KSIAAYTQLVQTYPQSSLWQQAKNRVTYLN-----------RFYF 619


>gi|325122509|gb|ADY82032.1| hypothetical protein BDGL_001446 [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 291

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 41/120 (34%), Gaps = 17/120 (14%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG--EYVAA 209
           Q   K  +  M   ++ + NS Y   A F++                + L      Y  A
Sbjct: 186 QGGAKKAIAPMQNFIKNHPNSVYTGNAYFWL--------------AEFNLATDPVNYNEA 231

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVE-AYVALALMDEAREVVSLIQERYPQGYWARYVET 268
              + +V   Y ++  A  A+ +L   A         A +  + I  +YP+   A++   
Sbjct: 232 KKNYNVVATQYPNSSKAPRALYQLYSIAKDVDKNTVSANQYKAKILSQYPKSEEAKFFNK 291



 Score = 42.0 bits (98), Expect = 0.079,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 46/137 (33%), Gaps = 9/137 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           +S     +    V  ++  Y  A+   K+    KA        ++ P +     +    A
Sbjct: 158 ASSPATQNQSNPVELEKAAYTVALDAYKQGGAKKAIAPMQNFIKNHPNSVYTGNAYFWLA 217

Query: 102 FVQYSAG--KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
               +     Y +A        TQYP S       Y +      + +DV    + T    
Sbjct: 218 EFNLATDPVNYNEAKKNYNVVATQYPNSSKAPRALYQL----YSIAKDVD---KNTVSAN 270

Query: 160 QYMSRIVERYTNSPYVK 176
           QY ++I+ +Y  S   K
Sbjct: 271 QYKAKILSQYPKSEEAK 287



 Score = 38.6 bits (89), Expect = 0.95,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 31/79 (39%), Gaps = 8/79 (10%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR-DVPYDQRATKLMLQYMS 163
           Y  G  ++A +  + +I  +P S     VY   G +Y  +   ++  D        +  +
Sbjct: 184 YKQGGAKKAIAPMQNFIKNHPNS-----VY--TGNAYFWLAEFNLATDPVNYNEAKKNYN 236

Query: 164 RIVERYTNSPYVKGARFYV 182
            +  +Y NS     A + +
Sbjct: 237 VVATQYPNSSKAPRALYQL 255


>gi|319781029|ref|YP_004140505.1| tol-pal system protein YbgF [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317166917|gb|ADV10455.1| tol-pal system protein YbgF [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 369

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/143 (15%), Positives = 46/143 (32%), Gaps = 22/143 (15%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
               +    D  + ++       E+Y  +  F+   ++  A + F      FP     + 
Sbjct: 224 GAAPKTGKSDTVVAALPATNNPEELYRNSYQFILSGDYGTAEQGFRDHIARFP-----KD 278

Query: 96  SLLMSAFVQYSAGKYQQA----ASLGEEYI---TQYPESKNVDYVYYLVGMSYAQMIRDV 148
           +   +A   Y  G+            E ++     YP++K    +   +G+S       V
Sbjct: 279 AK--AADAHYWLGESLLGQQKYRDAAETFLAASKDYPKAKKAPDMLLKLGVSL------V 330

Query: 149 PYDQRATKLMLQYMSRIVERYTN 171
              Q          S + +RY +
Sbjct: 331 GLKQHDV--ACATFSEVGKRYPD 351



 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 34/102 (33%), Gaps = 14/102 (13%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
             Q     + R+        A +++                  L + +Y  A   F    
Sbjct: 264 AEQGFRDHIARFPKDAKAADAHYWLGESL--------------LGQQKYRDAAETFLAAS 309

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            +Y  A+ A + + +L  + V L   D A    S + +RYP 
Sbjct: 310 KDYPKAKKAPDMLLKLGVSLVGLKQHDVACATFSEVGKRYPD 351


>gi|307637945|gb|ADN80395.1| Paralysed flagellar protein [Helicobacter pylori 908]
 gi|325996549|gb|ADZ51954.1| Paralysed flagella protein [Helicobacter pylori 2018]
 gi|325998138|gb|ADZ50346.1| Paralysed flagella protein [Helicobacter pylori 2017]
          Length = 801

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 50/137 (36%), Gaps = 9/137 (6%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             +T   Y    Y +A   +  Q +  A    ++  +++P     +   L+        G
Sbjct: 186 PLLTTKGYDLNAYLEAKKQMDSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIALGKLG 245

Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            K      +G ++I  YP   N+    Y V  +  +            K  ++Y  RI+ 
Sbjct: 246 IKKSLLIDIGTQWIKNYPTDPNIPEALYYVAKALDEN--------NNYKQAVRYYKRILL 297

Query: 168 RYTNSPYVKGARFYVTV 184
            Y NS Y   A+ ++ +
Sbjct: 298 EYKNSRYAPLAQMHLAI 314



 Score = 42.8 bits (100), Expect = 0.048,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 31/99 (31%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
             + RA   +    ++   + L I     +                +  TD      +Y 
Sbjct: 215 RTISRAFKNYPQTIFKKDLYLLEIIALGKLGIKKSLLIDIGTQWIKNYPTDPNIPEALYY 274

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
            A    +  N+ +A  Y+ +   ++  +  A  + +  A
Sbjct: 275 VAKALDENNNYKQAVRYYKRILLEYKNSRYAPLAQMHLA 313



 Score = 36.2 bits (83), Expect = 4.4,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 16/47 (34%)

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
           + NY    +  EA+  + +A        +A      I   Y    +A
Sbjct: 259 IKNYPTDPNIPEALYYVAKALDENNNYKQAVRYYKRILLEYKNSRYA 305


>gi|301757994|ref|XP_002914867.1| PREDICTED: prolyl 3-hydroxylase 2-like, partial [Ailuropoda
           melanoleuca]
          Length = 569

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 55/133 (41%), Gaps = 23/133 (17%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-KSLL-------MSAFVQ 104
           + +   E Y   V   +  +F  A +YF Q  R++ F+     ++L           ++ 
Sbjct: 111 EAKPHLESYSAGVKHYEADDFELAIKYFEQALREY-FSEDTECRALCEGPQRFEEYEYLG 169

Query: 105 YSA--------GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
           Y A        G+Y +A    + Y+  +P+ ++V     L  + Y + + D   D  A+ 
Sbjct: 170 YKAGLYEAIAVGEYVKALECAKAYLLLHPDDEDV-----LDNVDYYESLLDDSSDP-ASI 223

Query: 157 LMLQYMSRIVERY 169
              + ++  V+R+
Sbjct: 224 EAREDLAMFVKRH 236


>gi|289548076|ref|YP_003473064.1| sporulation domain protein [Thermocrinis albus DSM 14484]
 gi|289181693|gb|ADC88937.1| Sporulation domain protein [Thermocrinis albus DSM 14484]
          Length = 353

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 92/254 (36%), Gaps = 48/254 (18%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +  L +   ++ C              +         R  Y+  +  L  +N+S+A  
Sbjct: 1   MIRRWLLLSLIVSSCA------------QIQENKGAESARYYYDMGMSSLISRNYSEAIA 48

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
              + SR+ P+      +          AG+Y++A S    ++      KN       +G
Sbjct: 49  NLFRASRENPYDPKIWNA---LGIAYMEAGEYEKAESA---FVKALSVDKNFTDATLQLG 102

Query: 139 MSYA-------------QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           + +              + I D  + Q+       Y++R+ +       V   R Y+   
Sbjct: 103 ILHFRKGEYDKAKEYLLKAISDEGFPQKHM--AFYYLARVEKA------VGNERGYLENL 154

Query: 186 RNQLAAK------EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           R  +A        ++E+ + Y  RGEY AA+  ++ + +N  ++         +   Y A
Sbjct: 155 RKAVAYYPLFLEAQMELAQAYESRGEYDAALDVYRTLQSNGVNSPSVRLG---MARVYYA 211

Query: 240 LALMDEAREVVSLI 253
           +   ++A+ ++  +
Sbjct: 212 MGDTEKAKGLLREL 225


>gi|288800008|ref|ZP_06405467.1| putative TPR-repeat-containing protein [Prevotella sp. oral taxon
           299 str. F0039]
 gi|288333256|gb|EFC71735.1| putative TPR-repeat-containing protein [Prevotella sp. oral taxon
           299 str. F0039]
          Length = 231

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 66/183 (36%), Gaps = 24/183 (13%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY--------EKAVLFLKEQNFSKAY 77
           I + + +  L       S++   DS+  +  Q +VY        +KA   ++ +N+  A 
Sbjct: 4   IIYFVLLLLLSTNAFSQSKEQLKDSLAVITTQLKVYPSSIYLLLKKAGYNMQLENWQNAI 63

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           + ++   +  P     + +L   A++     +   + +  E  +  YP           +
Sbjct: 64  DAYSDILKQQPRN---QTALYFRAYLYEKTSRLNLSRTDYETLLKVYPNHFEG-----RL 115

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP--YVKGARFYVTVGRNQLAAKEVE 195
           G++              T   +  +++++E Y +S   Y   A F     + +LA  +  
Sbjct: 116 GLALLNNKTS------HTIEAMDILNQLIEAYPDSAITYAIRAGFEEEKHQYELAEYDFS 169

Query: 196 IGR 198
              
Sbjct: 170 QAE 172


>gi|310821739|ref|YP_003954097.1| hypothetical protein STAUR_4490 [Stigmatella aurantiaca DW4/3-1]
 gi|309394811|gb|ADO72270.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 351

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 43/131 (32%), Gaps = 8/131 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           +E+     +  +     E   +     P    A  +         + GK+ QA  L   +
Sbjct: 190 FERGKAAFRRNDMKGTVEDLARFMAMNPSEADALDASFFLGAAYNNLGKHDQAVPLLARF 249

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +     SK  DY   L+  SY +  +        T+  L  +   +  Y  + Y+   R 
Sbjct: 250 VDGDKRSKTRDYAMVLLAQSYQETNQ--------TEKALATVRDAIATYPATQYLGAMRA 301

Query: 181 YVTVGRNQLAA 191
            +   + QL  
Sbjct: 302 RLNSAKRQLGG 312


>gi|169633340|ref|YP_001707076.1| hypothetical protein ABSDF1691 [Acinetobacter baumannii SDF]
 gi|169795692|ref|YP_001713485.1| hypothetical protein ABAYE1588 [Acinetobacter baumannii AYE]
 gi|184158407|ref|YP_001846746.1| hypothetical protein ACICU_02087 [Acinetobacter baumannii ACICU]
 gi|213158363|ref|YP_002319661.1| hypothetical protein AB57_2309 [Acinetobacter baumannii AB0057]
 gi|215483178|ref|YP_002325385.1| hypothetical protein ABBFA_001482 [Acinetobacter baumannii
           AB307-0294]
 gi|301348116|ref|ZP_07228857.1| hypothetical protein AbauAB0_17761 [Acinetobacter baumannii AB056]
 gi|301512101|ref|ZP_07237338.1| hypothetical protein AbauAB05_10987 [Acinetobacter baumannii AB058]
 gi|301597368|ref|ZP_07242376.1| hypothetical protein AbauAB059_16161 [Acinetobacter baumannii
           AB059]
 gi|332852510|ref|ZP_08434249.1| hypothetical protein HMPREF0021_01824 [Acinetobacter baumannii
           6013150]
 gi|332871286|ref|ZP_08439835.1| hypothetical protein HMPREF0020_03490 [Acinetobacter baumannii
           6013113]
 gi|332873898|ref|ZP_08441838.1| hypothetical protein HMPREF0022_01450 [Acinetobacter baumannii
           6014059]
 gi|169148619|emb|CAM86485.1| conserved hypothetical protein; putative exported protein
           [Acinetobacter baumannii AYE]
 gi|169152132|emb|CAP01031.1| conserved hypothetical protein; putative exported protein
           [Acinetobacter baumannii]
 gi|183210001|gb|ACC57399.1| uncharacterized protein conserved in bacteria [Acinetobacter
           baumannii ACICU]
 gi|213057523|gb|ACJ42425.1| hypothetical protein AB57_2309 [Acinetobacter baumannii AB0057]
 gi|213989047|gb|ACJ59346.1| hypothetical protein ABBFA_001482 [Acinetobacter baumannii
           AB307-0294]
 gi|322508731|gb|ADX04185.1| putative exported protein [Acinetobacter baumannii 1656-2]
 gi|323518336|gb|ADX92717.1| hypothetical protein ABTW07_2293 [Acinetobacter baumannii
           TCDC-AB0715]
 gi|332729212|gb|EGJ60555.1| hypothetical protein HMPREF0021_01824 [Acinetobacter baumannii
           6013150]
 gi|332731570|gb|EGJ62856.1| hypothetical protein HMPREF0020_03490 [Acinetobacter baumannii
           6013113]
 gi|332737884|gb|EGJ68771.1| hypothetical protein HMPREF0022_01450 [Acinetobacter baumannii
           6014059]
          Length = 294

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 42/120 (35%), Gaps = 17/120 (14%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG--EYVAA 209
           Q   K  +  M   ++ + NS Y   A F++                ++L      Y  A
Sbjct: 189 QGGAKKAIAPMQNFIKNHPNSIYTGNAYFWL--------------AEFHLATDPVNYNEA 234

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVE-AYVALALMDEAREVVSLIQERYPQGYWARYVET 268
              + +V   Y ++  A  A+ +L   A         A +  + +  +YP+   A++   
Sbjct: 235 KKNYNVVANQYPNSSKAPRALYQLYSIAKDVDKNTVSANQYKNKLLSQYPKSEEAKFFNK 294



 Score = 44.0 bits (103), Expect = 0.021,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 41/122 (33%), Gaps = 9/122 (7%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG--KYQQAA 114
           ++  Y  A+   K+    KA        ++ P +     +    A    +     Y +A 
Sbjct: 176 EKAAYTVALDAYKQGGAKKAIAPMQNFIKNHPNSIYTGNAYFWLAEFHLATDPVNYNEAK 235

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
                   QYP S       Y +      + +DV    + T    QY ++++ +Y  S  
Sbjct: 236 KNYNVVANQYPNSSKAPRALYQL----YSIAKDVD---KNTVSANQYKNKLLSQYPKSEE 288

Query: 175 VK 176
            K
Sbjct: 289 AK 290



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 28/79 (35%), Gaps = 8/79 (10%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR-DVPYDQRATKLMLQYMS 163
           Y  G  ++A +  + +I  +P S          G +Y  +    +  D        +  +
Sbjct: 187 YKQGGAKKAIAPMQNFIKNHPNSIYT-------GNAYFWLAEFHLATDPVNYNEAKKNYN 239

Query: 164 RIVERYTNSPYVKGARFYV 182
            +  +Y NS     A + +
Sbjct: 240 VVANQYPNSSKAPRALYQL 258


>gi|86359051|ref|YP_470943.1| hypothetical protein RHE_CH03460 [Rhizobium etli CFN 42]
 gi|86283153|gb|ABC92216.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 249

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 47/142 (33%), Gaps = 14/142 (9%)

Query: 33  CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
             +       +          +  + + Y+ A   +   ++  A E FNQ    +P +  
Sbjct: 101 ATIGSGPIPRANSGTPQQTASLGSEADQYKAAYGHVLSGDYGTAEEEFNQYIARYPSSAR 160

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP---ESKNVDYVYYLVGMSYAQMIRDVP 149
           A  +        YS GKY +A    + ++  +     S+    +   +GMS A +     
Sbjct: 161 AADANFWLGEALYSQGKYNEA---AKTFLNAHQKYGSSEKAPEMLLKLGMSLAALDNK-- 215

Query: 150 YDQRATKLMLQYMSRIVERYTN 171
                 +     +  + +RY  
Sbjct: 216 ------ETACATLREVSKRYPK 231



 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 38/104 (36%), Gaps = 14/104 (13%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
             +  ++ + RY +S     A F++                    +G+Y  A   F    
Sbjct: 144 AEEEFNQYIARYPSSARAADANFWLGEAL--------------YSQGKYNEAAKTFLNAH 189

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             Y  +E A E + +L  +  AL   + A   +  + +RYP+  
Sbjct: 190 QKYGSSEKAPEMLLKLGMSLAALDNKETACATLREVSKRYPKAS 233


>gi|51246265|ref|YP_066149.1| hypothetical protein DP2413 [Desulfotalea psychrophila LSv54]
 gi|50877302|emb|CAG37142.1| hypothetical protein DP2413 [Desulfotalea psychrophila LSv54]
          Length = 346

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 50/142 (35%), Gaps = 8/142 (5%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
            S +               +  KA    KE   + AY  F + S+    + +  ++L M 
Sbjct: 211 TSQQKTVAPDKVIAPTGAILIAKANTIFKENRLADAYTMFEEISQSNYDSKITAEALYMM 270

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
              ++    Y+ A    ++ I QYP++          G S+A+ +          +    
Sbjct: 271 GECRFYQKDYEDAVVRYQDLIRQYPDTPLSASSLLRQGNSFAKSLDK--------ETSKM 322

Query: 161 YMSRIVERYTNSPYVKGARFYV 182
              +++E+Y +S     A   +
Sbjct: 323 IYKKVIEKYPDSSQAIAATKEL 344



 Score = 44.0 bits (103), Expect = 0.021,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 37/105 (35%), Gaps = 14/105 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                   I +   +S     A + +   R            +Y K  +Y  A+ R+Q +
Sbjct: 245 DAYTMFEEISQSNYDSKITAEALYMMGECR------------FYQK--DYEDAVVRYQDL 290

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +  Y D   +  ++ R   ++      + ++ +   + E+YP   
Sbjct: 291 IRQYPDTPLSASSLLRQGNSFAKSLDKETSKMIYKKVIEKYPDSS 335


>gi|113475440|ref|YP_721501.1| heat shock protein DnaJ-like [Trichodesmium erythraeum IMS101]
 gi|110166488|gb|ABG51028.1| heat shock protein DnaJ-like [Trichodesmium erythraeum IMS101]
          Length = 415

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 34/94 (36%), Gaps = 10/94 (10%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           +V   +E+Y++ V   +  N+  A   + +     P        L   AF  Y    Y+ 
Sbjct: 70  NVEEAQELYKRGVSKSQRGNYQGAILDYTKALEINP--DWLE-VLYNRAFASYKLQDYRN 126

Query: 113 AASLGEE--YITQYPESKNVDYVYYLVGMSYAQM 144
           A     +  ++        +  VYY  G+   ++
Sbjct: 127 ADIDYTKALFL-----DPYLVEVYYYRGLCRMKL 155


>gi|297182009|gb|ADI18184.1| uncharacterized protein conserved in bacteria [uncultured delta
           proteobacterium HF0200_39N20]
          Length = 258

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 35/75 (46%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           + +G  +L+RG    +   + ++L  Y+   H   A+  L +A   LA  ++ + + + +
Sbjct: 174 MSLGNGFLERGHATQSAYYYGIILREYTGTSHVPNALYYLGKAMEELAETEKQKVLWNEL 233

Query: 254 QERYPQGYWARYVET 268
            + +P    A+  + 
Sbjct: 234 IKNHPNSPLAKRAKK 248



 Score = 35.9 bits (82), Expect = 5.6,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 42/119 (35%), Gaps = 8/119 (6%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
            ++ L+  N  +A  Y            +  + L+         G   Q+A      + +
Sbjct: 140 GLISLQAGNPDQALVYLQDILIQIDKTPLKAQILMSLGNGFLERGHATQSAYYYGIILRE 199

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
           Y  + +V    Y +G +  ++          T+      + +++ + NSP  K A+  +
Sbjct: 200 YTGTSHVPNALYYLGKAMEELAE--------TEKQKVLWNELIKNHPNSPLAKRAKKRL 250


>gi|237809440|ref|YP_002893880.1| tol-pal system protein YbgF [Tolumonas auensis DSM 9187]
 gi|237501701|gb|ACQ94294.1| tol-pal system protein YbgF [Tolumonas auensis DSM 9187]
          Length = 262

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 43/128 (33%), Gaps = 22/128 (17%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               Y +A    + +I  YP S      +Y +G         +  +Q   +    +   +
Sbjct: 155 KEKNYAKAIPAFDTFIASYPNSALQPGAHYWLG--------QLQLNQGDREQAKAHFLTV 206

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
            ++Y +SP    A + + V       KE               A   FQLV+  Y +   
Sbjct: 207 AQKYKDSPKRPEAIYKLGVIAKADGDKE--------------KANKFFQLVIKQYPNTSA 252

Query: 226 AEEAMARL 233
           A+ A   +
Sbjct: 253 AQLAQKAM 260



 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 53/126 (42%), Gaps = 15/126 (11%)

Query: 61  YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           YE AV   +KE+N++KA   F+     +P + +   +      +Q + G  +QA +    
Sbjct: 146 YESAVNLVIKEKNYAKAIPAFDTFIASYPNSALQPGAHYWLGQLQLNQGDREQAKA---H 202

Query: 120 YI---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
           ++    +Y +S       Y +G+        +       +   ++   ++++Y N+   +
Sbjct: 203 FLTVAQKYKDSPKRPEAIYKLGV--------IAKADGDKEKANKFFQLVIKQYPNTSAAQ 254

Query: 177 GARFYV 182
            A+  +
Sbjct: 255 LAQKAM 260



 Score = 41.3 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 37/105 (35%), Gaps = 14/105 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             +      +  Y NS    GA +++   +              L +G+   A   F  V
Sbjct: 161 KAIPAFDTFIASYPNSALQPGAHYWLGQLQ--------------LNQGDREQAKAHFLTV 206

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
              Y D+    EA+ +L     A    ++A +   L+ ++YP   
Sbjct: 207 AQKYKDSPKRPEAIYKLGVIAKADGDKEKANKFFQLVIKQYPNTS 251


>gi|254417224|ref|ZP_05030969.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
 gi|196176030|gb|EDX71049.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
          Length = 600

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 73/226 (32%), Gaps = 41/226 (18%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + KF+  I  ++    +V  + Q +  +    V      + +   A +  ++ ++  A  
Sbjct: 1   MIKFSDRIPAALIGTAIVLVQPQFAVALTNLVVAQQPTVQNLINSARIKAEKGDYQGAIA 60

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY--VYYL 136
            +NQ  +    +    +   + A   Y    YQ A +   + I   P     DY   YY 
Sbjct: 61  DYNQALQL---SPNNAEVYYLRANAYYQLENYQGAIADFNQAIKINP-----DYAIAYYN 112

Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
            G++ + +           +  +   ++ ++   +      A     + R+ L   E  I
Sbjct: 113 RGLARSNL--------GDYQGAIADYTQAIQLNPDD---AIAYNNRGLARSNLGDYEEAI 161

Query: 197 GRY-------------YLKR-------GEYVAAIPRFQLVLANYSD 222
             +             Y  R       G+Y  AI  +   +    D
Sbjct: 162 ADFAQAIQLNPDDATAYYNRGLARSDLGDYQGAIADYTQAIKINPD 207



 Score = 40.9 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 18/126 (14%), Positives = 40/126 (31%), Gaps = 28/126 (22%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS------ 106
           +  Y    Y +        +   A   FNQ  +  P            A+  Y+      
Sbjct: 307 NPDYANAYYNRGNARSDLGDDQGAIADFNQAIQLNP----------DFAYAYYNRGNARS 356

Query: 107 -AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
             G Y++A +   + I   P+       YY  G++ + +  D        +  +   ++ 
Sbjct: 357 NLGDYEEAIADFAQAIQLNPDD---ATAYYNRGLARSDLGDD--------QGAIADYNQA 405

Query: 166 VERYTN 171
           ++   +
Sbjct: 406 IQINPD 411


>gi|189183560|ref|YP_001937345.1| TPR repeat-containing protein 05 [Orientia tsutsugamushi str.
           Ikeda]
 gi|189180331|dbj|BAG40111.1| TPR repeat-containing protein 05 [Orientia tsutsugamushi str.
           Ikeda]
          Length = 263

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 38/124 (30%), Gaps = 28/124 (22%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY-------SAG 108
           +    Y K     K   + +A E F+   +  P            A   Y        +G
Sbjct: 143 HADAYYNKGNCLAKLGQYQEAIENFDLAIKYNP----------NHADAYYNKGVCLCKSG 192

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           ++Q+A    +  I   P      Y YY  G   A++           +  ++     ++ 
Sbjct: 193 QFQEAIENYDLAIKYNPNH---AYAYYNKGNCLAKL--------GQYQKAIENFDLAIKY 241

Query: 169 YTNS 172
             N+
Sbjct: 242 DPNN 245



 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 22/164 (13%), Positives = 52/164 (31%), Gaps = 32/164 (19%)

Query: 71  QNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
           + + +A + +N         A     + +   F      +YQ+A    +  I   P   +
Sbjct: 90  ERYKEAIKNYNLAIKYKHNLAE----AYVNKGFCLGKLRQYQEAIENYDLAIKYNPNHAD 145

Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG---- 185
               YY  G   A++           +  ++     ++   N      A +   V     
Sbjct: 146 ---AYYNKGNCLAKL--------GQYQEAIENFDLAIKYNPNH---ADAYYNKGVCLCKS 191

Query: 186 ---RNQLAAKEVEI------GRYYLKRGEYVAAIPRFQLVLANY 220
              +  +   ++ I         Y  +G  +A + ++Q  + N+
Sbjct: 192 GQFQEAIENYDLAIKYNPNHAYAYYNKGNCLAKLGQYQKAIENF 235


>gi|325927916|ref|ZP_08189140.1| tetratricopeptide repeat protein,von Willebrand factor type A-like
           protein [Xanthomonas perforans 91-118]
 gi|325541756|gb|EGD13274.1| tetratricopeptide repeat protein,von Willebrand factor type A-like
           protein [Xanthomonas perforans 91-118]
          Length = 605

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 38/111 (34%), Gaps = 9/111 (8%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           ++    +     VC L   +   + D  L    D   Q+ + +  V   ++ +F+ A + 
Sbjct: 324 FRRRAVVAVLAMVCVLPLAQPAHAADGTLWQRADQVQQQRL-DAGVQAYRKGDFAAAQKA 382

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           F              + L          G+Y  A +  +  + Q+P  ++ 
Sbjct: 383 FEAVP--------TDEGLYNLGNALARQGQYDAAIAAYDRALKQHPNQQDA 425


>gi|148258084|ref|YP_001242669.1| hypothetical protein BBta_6876 [Bradyrhizobium sp. BTAi1]
 gi|146410257|gb|ABQ38763.1| putative exported protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 348

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 33/133 (24%), Gaps = 22/133 (16%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
                        Y  A      +  +YP    +    Y +G S+ Q         +  +
Sbjct: 227 EYDLGIGYMQRRDYALAEQTMRNFTQKYPNDPMIGDAKYWLGESFYQR--------QQYR 278

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              +    +  ++  S     A   +      L  KE              AA   F  +
Sbjct: 279 DAAEVFLAVTTKHDKSSKAPDALLRLGQSLAALKEKE--------------AACAAFGEI 324

Query: 217 LANYSDAEHAEEA 229
              Y  A    +A
Sbjct: 325 SRKYPRASAGVKA 337



 Score = 40.5 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 49/127 (38%), Gaps = 22/127 (17%)

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
           Y +G+ Y Q         R   L  Q M    ++Y N P +  A++++            
Sbjct: 228 YDLGIGYMQR--------RDYALAEQTMRNFTQKYPNDPMIGDAKYWL------------ 267

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
             G  + +R +Y  A   F  V   +  +  A +A+ RL ++  AL   + A      I 
Sbjct: 268 --GESFYQRQQYRDAAEVFLAVTTKHDKSSKAPDALLRLGQSLAALKEKEAACAAFGEIS 325

Query: 255 ERYPQGY 261
            +YP+  
Sbjct: 326 RKYPRAS 332



 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/126 (12%), Positives = 45/126 (35%), Gaps = 14/126 (11%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           LD+    +  R+ Y+  + +++ ++++ A +     ++ +P   +   +        Y  
Sbjct: 215 LDTAPPTQTPRDEYDLGIGYMQRRDYALAEQTMRNFTQKYPNDPMIGDAKYWLGESFYQR 274

Query: 108 GKYQQAASLGEEYITQ---YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
            +Y+ A    E ++     + +S         +G S A +        +  +        
Sbjct: 275 QQYRDA---AEVFLAVTTKHDKSSKAPDALLRLGQSLAAL--------KEKEAACAAFGE 323

Query: 165 IVERYT 170
           I  +Y 
Sbjct: 324 ISRKYP 329


>gi|254426965|ref|ZP_05040672.1| tol-pal system protein YbgF, putative [Alcanivorax sp. DG881]
 gi|196193134|gb|EDX88093.1| tol-pal system protein YbgF, putative [Alcanivorax sp. DG881]
          Length = 254

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/143 (13%), Positives = 40/143 (27%), Gaps = 24/143 (16%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY------- 105
           D    R  Y  A   L   +F  A   F     +FP         +  A   +       
Sbjct: 126 DPEADRAAYNAAKDKLVSGDFKGAIAGFEAYLGEFPQG-------MSRANAHFWAGKLYS 178

Query: 106 --SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
                  ++A    +     YP+        Y++ +  A+                  + 
Sbjct: 179 DQKEPDLKKAEGHFQAVADDYPDHSKAPKSLYILAVMQAKA--------GEVSPAKVNLH 230

Query: 164 RIVERYTNSPYVKGARFYVTVGR 186
           +++++Y +S     A+  +    
Sbjct: 231 KLIKQYPDSSEAGQAKSLLDQLN 253



 Score = 35.9 bits (82), Expect = 5.9,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 26/62 (41%)

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           A   FQ V  +Y D   A +++  L         +  A+  +  + ++YP    A   ++
Sbjct: 188 AEGHFQAVADDYPDHSKAPKSLYILAVMQAKAGEVSPAKVNLHKLIKQYPDSSEAGQAKS 247

Query: 269 LV 270
           L+
Sbjct: 248 LL 249


>gi|183219913|ref|YP_001837909.1| hypothetical protein LEPBI_I0495 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189910037|ref|YP_001961592.1| hypothetical protein LBF_0475 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167774713|gb|ABZ93014.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167778335|gb|ABZ96633.1| Hypothetical protein; putative signal peptide [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 798

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/137 (10%), Positives = 45/137 (32%), Gaps = 19/137 (13%)

Query: 45  DVYLDSVTDVRYQREVYE---KAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMS 100
           +    +  +       Y+   + +   ++  ++ A          + P      +     
Sbjct: 629 EEVAHAAKESTKNNTYYKMLGEGIQSYRDGEWNHAIYALEIALESE-PDDLYCLR---EL 684

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKN----VDYVY-----YLVGMSYAQMIRDVPYD 151
           + +   +  Y++A  L   Y+   P   +    + Y +     +++   YA+ +R    D
Sbjct: 685 SKLYMKSKDYEKAIGLANRYLQLNPGDTDFLFYIAYAHKQKRDFVLATDYAERLRY--RD 742

Query: 152 QRATKLMLQYMSRIVER 168
            +    +L     ++ R
Sbjct: 743 PKNFNNLLLLAEILMHR 759


>gi|68468624|ref|XP_721631.1| potential calcineurin-like Serine/Threonine phosphatase [Candida
           albicans SC5314]
 gi|46443554|gb|EAL02835.1| potential calcineurin-like Serine/Threonine phosphatase [Candida
           albicans SC5314]
          Length = 614

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 47/153 (30%), Gaps = 37/153 (24%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +K    LK+  + +A E + +     P      + ++ +           Y  A    + 
Sbjct: 62  DKGNNLLKQHKYDEAIEAYTKAIEIDPNNAIFYSNRAQVQI-----KLENYGLAIQDCDL 116

Query: 120 YITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
            I       ++++   YY  G+S   ++          K  L+    I+++  N      
Sbjct: 117 VIKL-----DINFLKAYYRKGVSLMAILNH--------KQALENFKFILKKLPNDKLTLE 163

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
                    N            YLKR  +  AI
Sbjct: 164 NYK---QCTN------------YLKRQAFEKAI 181


>gi|308185022|ref|YP_003929155.1| paralysed flagella protein [Helicobacter pylori SJM180]
 gi|308060942|gb|ADO02838.1| paralysed flagella protein [Helicobacter pylori SJM180]
          Length = 801

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 49/137 (35%), Gaps = 9/137 (6%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             +T   Y    Y +A   +  Q +  A    ++  +++P     +   L+        G
Sbjct: 186 PLLTTKGYDLNAYLEAKKQINSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIALGKLG 245

Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            K      +G ++I  YP   N+    Y V  +  +            K  ++Y  RI+ 
Sbjct: 246 IKKSLLIDIGTQWIKNYPTDPNIPEALYYVAKALDEN--------NNYKQAVRYYKRILL 297

Query: 168 RYTNSPYVKGARFYVTV 184
            Y NS Y   A+  + +
Sbjct: 298 EYKNSRYAPLAQMRLAI 314



 Score = 43.6 bits (102), Expect = 0.027,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 31/99 (31%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
             + RA   +    ++   + L I     +                +  TD      +Y 
Sbjct: 215 RTISRAFKNYPQTIFKKDLYLLEIIALGKLGIKKSLLIDIGTQWIKNYPTDPNIPEALYY 274

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
            A    +  N+ +A  Y+ +   ++  +  A  + +  A
Sbjct: 275 VAKALDENNNYKQAVRYYKRILLEYKNSRYAPLAQMRLA 313



 Score = 36.6 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 16/47 (34%)

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
           + NY    +  EA+  + +A        +A      I   Y    +A
Sbjct: 259 IKNYPTDPNIPEALYYVAKALDENNNYKQAVRYYKRILLEYKNSRYA 305


>gi|254779817|ref|YP_003057923.1| putative paralysed flagella protein PflA; putative signal peptide
           [Helicobacter pylori B38]
 gi|254001729|emb|CAX29960.1| Putative paralysed flagella protein PflA; putative signal peptide
           [Helicobacter pylori B38]
          Length = 801

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 50/137 (36%), Gaps = 9/137 (6%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             +T   Y    Y +A   +  Q +  A    ++  +++P     +   L+        G
Sbjct: 186 PLLTTKGYDLNAYLEAKKQMDSQAYFDALRTISRTFKNYPQTMFKKDLYLLEIIALGQLG 245

Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            K      +G ++I  YP   N+  V Y V  +  +            K  ++Y  RI+ 
Sbjct: 246 IKKSLLIDIGTKWIKNYPTDPNIPEVLYYVAKALDEN--------NNYKQAMRYYKRILL 297

Query: 168 RYTNSPYVKGARFYVTV 184
            Y NS Y   A+  + +
Sbjct: 298 EYKNSRYAPLAQMRLAI 314



 Score = 43.2 bits (101), Expect = 0.041,   Method: Composition-based stats.
 Identities = 12/99 (12%), Positives = 30/99 (30%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
             + R    +    ++   + L I     +                +  TD      +Y 
Sbjct: 215 RTISRTFKNYPQTMFKKDLYLLEIIALGQLGIKKSLLIDIGTKWIKNYPTDPNIPEVLYY 274

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
            A    +  N+ +A  Y+ +   ++  +  A  + +  A
Sbjct: 275 VAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRLA 313


>gi|78222589|ref|YP_384336.1| lytic transglycosylase, catalytic [Geobacter metallireducens GS-15]
 gi|78193844|gb|ABB31611.1| Lytic transglycosylase, catalytic [Geobacter metallireducens GS-15]
          Length = 719

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/190 (11%), Positives = 58/190 (30%), Gaps = 38/190 (20%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++ +A    +     +A E   +   + P + + R++ ++ A + ++ G  ++A ++   
Sbjct: 96  LFWEADALYRIARHDEALETVKRLLHERPESPLVRRARMLQADILFARGDLKEAQAVYIR 155

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           ++  YP  ++     Y        +              +Q +  +   Y  SP  + A 
Sbjct: 156 FVESYPSGRDSLTAIYQAARCREGLGDKA--------KAVQELRNLWLAYPASPVAEDAE 207

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             +     Q                               +  A +  + + R      +
Sbjct: 208 EALRQLERQ------------------------------GFPAAPYTPDELFRRASTLYS 237

Query: 240 LALMDEAREV 249
           L    +A + 
Sbjct: 238 LGRFQQAVKT 247


>gi|311694924|gb|ADP97797.1| secreted protein containing Tol-Pal system, YbgF domain [marine
           bacterium HP15]
          Length = 248

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 44/124 (35%), Gaps = 22/124 (17%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
           +  KY  A S   E+I +YPE       YY +G  Y    +         +   Q  + +
Sbjct: 138 NQKKYDDAISRIYEFIDEYPEGDLTVNAYYWLGEVYLVKPQ--------LEQAKQAFTIV 189

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
             R+ +      A + + V  ++L  KE               A    Q V+ +Y  +  
Sbjct: 190 ATRFADHRKAPDAVYKLGVTHDRLGEKE--------------QARRSMQTVIDDYPSSSA 235

Query: 226 AEEA 229
           A+ A
Sbjct: 236 ADLA 239



 Score = 46.3 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 49/130 (37%), Gaps = 14/130 (10%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            + I+D+  +Q+     +  +   ++ Y        A +++              G  YL
Sbjct: 129 YEQIQDLIRNQKKYDDAISRIYEFIDEYPEGDLTVNAYYWL--------------GEVYL 174

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + +   A   F +V   ++D   A +A+ +L   +  L   ++AR  +  + + YP   
Sbjct: 175 VKPQLEQAKQAFTIVATRFADHRKAPDAVYKLGVTHDRLGEKEQARRSMQTVIDDYPSSS 234

Query: 262 WARYVETLVK 271
            A      ++
Sbjct: 235 AADLARKFLE 244



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/137 (10%), Positives = 44/137 (32%), Gaps = 18/137 (13%)

Query: 56  YQREVYEKAVLFL-KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
            +R+ YE+    +  ++ +  A     +   ++P   +   +      V     + +QA 
Sbjct: 124 EERKAYEQIQDLIRNQKKYDDAISRIYEFIDEYPEGDLTVNAYYWLGEVYLVKPQLEQAK 183

Query: 115 SL----GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
                    +     + +      Y +G+++ ++           +   + M  +++ Y 
Sbjct: 184 QAFTIVATRFA----DHRKAPDAVYKLGVTHDRL--------GEKEQARRSMQTVIDDYP 231

Query: 171 NSPYVKGARFYVTVGRN 187
           +S             +N
Sbjct: 232 SSS-AADLARKFLESQN 247


>gi|325475688|gb|EGC78864.1| TPR domain-containing protein [Treponema denticola F0402]
          Length = 992

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/207 (11%), Positives = 63/207 (30%), Gaps = 44/207 (21%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF---- 102
                 D + +  +Y     + +  ++  A + F       P       +    A+    
Sbjct: 101 EKAKAIDSKNETTLYNLGNTYKQNGDYKHAIQCFTDVLDIKP-----DDA---LAYNHLG 152

Query: 103 -VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
            V +    Y +A    +  +   P    +             +  ++  +++  K  +  
Sbjct: 153 SVYFLCKDYPKALETYKIGLKVDPNHPFL----------NFNLA-ELYKEEKHYKEAINS 201

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
               ++   N                 LA     I   Y++  E+  AI  +++++ +  
Sbjct: 202 YQTAMKTKPN-------------WYEALA----AIADCYVEMEEFGKAIETYKMIIGS-- 242

Query: 222 DAEHAEEAMARLVEAYVALALMDEARE 248
               +EE   +L + Y  +    +A +
Sbjct: 243 -TGQSEENFTKLAKLYEKIHEDKDAED 268


>gi|222086971|ref|YP_002545505.1| tol-pal system protein YbgF [Agrobacterium radiobacter K84]
 gi|221724419|gb|ACM27575.1| tol-pal system protein YbgF [Agrobacterium radiobacter K84]
          Length = 356

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 14/104 (13%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
             Q   + ++ Y +S     A F++                    +G+Y  A   F    
Sbjct: 251 AEQEFRQYIDSYPSSSRSADANFWLGEAL--------------YSQGKYNDAAKTFLNAH 296

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             YS +E A E + +L  +  AL   D A   +  + +RYP+  
Sbjct: 297 QKYSTSEKAPEMLLKLGMSLAALDNKDTACATLREVTKRYPKAS 340



 Score = 44.0 bits (103), Expect = 0.025,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 46/119 (38%), Gaps = 14/119 (11%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
            + + Y+ A   +   ++S A + F Q    +P +  +  +        YS GKY  A  
Sbjct: 231 SENDEYKAAYGHVLSGDYSVAEQEFRQYIDSYPSSSRSADANFWLGEALYSQGKYNDA-- 288

Query: 116 LGEEYI---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
             + ++    +Y  S+    +   +GMS A +      D + T      +  + +RY  
Sbjct: 289 -AKTFLNAHQKYSTSEKAPEMLLKLGMSLAAL------DNKDT--ACATLREVTKRYPK 338



 Score = 35.5 bits (81), Expect = 8.5,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 25/86 (29%), Gaps = 8/86 (9%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
              +A+    +G Y  A     +YI  YP S       + +G +           Q    
Sbjct: 235 EYKAAYGHVLSGDYSVAEQEFRQYIDSYPSSSRSADANFWLGEALYS--------QGKYN 286

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYV 182
              +      ++Y+ S         +
Sbjct: 287 DAAKTFLNAHQKYSTSEKAPEMLLKL 312


>gi|119510603|ref|ZP_01629733.1| hypothetical protein N9414_18328 [Nodularia spumigena CCY9414]
 gi|119464764|gb|EAW45671.1| hypothetical protein N9414_18328 [Nodularia spumigena CCY9414]
          Length = 716

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 42/123 (34%), Gaps = 16/123 (13%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            + +  ++ + +  A   F++     P +    K      +     G+  +A +  ++ +
Sbjct: 595 NRGLALIELERYEDAIASFDKAIDINPNSA---KVWDKRGYALVRLGEDDEAIASFDKAL 651

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              P   N    YY     YA         QR  KL L  + + +E      Y + A F 
Sbjct: 652 EINP---NYASAYYDKAACYAL--------QRQLKLALANLQQAIELNP--RYQEDAAFD 698

Query: 182 VTV 184
           +  
Sbjct: 699 IDF 701



 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 77/231 (33%), Gaps = 46/231 (19%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA-RKSLLM 99
           + S    +   ++V     + ++      ++ + +A   +++   D P   VA  K  L 
Sbjct: 473 EKSEIQEVQPQSEVLVNDAL-QEGDELFAQRKYDEAIALYDKVVADDPDNHVAWLKHGLT 531

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKL 157
                    +Y+ A +  E+ I   P     DY   +   G+++ ++ +         + 
Sbjct: 532 LG----RLQRYKDAIASYEKAIEIKP-----DYHEAWCDRGVAFGKLGQQ--------QK 574

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
                 +  +   + P        V      LA  E+           Y  AI  F   +
Sbjct: 575 AFDSFDKATQVKPDDP--------VAWLNRGLALIEL---------ERYEDAIASFDKAI 617

Query: 218 ANYSDAEHAEE----AMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
               ++    +    A+ RL E   A+A  D+A E    I   Y   Y+ +
Sbjct: 618 DINPNSAKVWDKRGYALVRLGEDDEAIASFDKALE----INPNYASAYYDK 664


>gi|147921707|ref|YP_684473.1| thioredoxin-like protein [uncultured methanogenic archaeon RC-I]
 gi|110619869|emb|CAJ35147.1| thioredoxin-like protein [uncultured methanogenic archaeon RC-I]
          Length = 195

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 26/69 (37%), Gaps = 1/69 (1%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA-YVALALMDEAREVVSLIQERYPQ 259
           ++  +Y  AI  F+ +   Y + E A EA      A Y         +     +  +YP+
Sbjct: 123 MRNEDYDKAISCFETIDKKYPETEAAPEAAYYTGVAQYKKTNDAKMLKNAHIYLSRKYPE 182

Query: 260 GYWARYVET 268
             WA+    
Sbjct: 183 SDWAKKAFA 191



 Score = 43.6 bits (102), Expect = 0.030,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 29/81 (35%), Gaps = 1/81 (1%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                  + +  +  + ++ +++ KA   F    + +P    A ++   +   QY     
Sbjct: 106 PPKDFRAQLILGEGKVSMRNEDYDKAISCFETIDKKYPETEAAPEAAYYTGVAQYKKTND 165

Query: 111 QQAASLGEEYI-TQYPESKNV 130
            +       Y+  +YPES   
Sbjct: 166 AKMLKNAHIYLSRKYPESDWA 186



 Score = 38.9 bits (90), Expect = 0.68,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 7/73 (9%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               Y +A S  E    +YPE++      Y  G++  +       D +  K    Y+SR 
Sbjct: 124 RNEDYDKAISCFETIDKKYPETEAAPEAAYYTGVAQYKKTN----DAKMLKNAHIYLSR- 178

Query: 166 VERYTNSPYVKGA 178
             +Y  S + K A
Sbjct: 179 --KYPESDWAKKA 189


>gi|153876671|ref|ZP_02003871.1| conserved hypothetical protein, secreted [Beggiatoa sp. PS]
 gi|152066865|gb|EDN66129.1| conserved hypothetical protein, secreted [Beggiatoa sp. PS]
          Length = 257

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 27/70 (38%), Gaps = 4/70 (5%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y++ V   KE  +  A E F+      P       +        +  G Y++A +  E+ 
Sbjct: 51  YKRGVALYKEGQYIAAAEAFSNV--THP--DATLNAQYNLGNAYFQQGDYEKAINTYEQV 106

Query: 121 ITQYPESKNV 130
           + + P  ++ 
Sbjct: 107 LAEQPNHEDA 116


>gi|326336387|ref|ZP_08202558.1| TPR-domain containing protein [Capnocytophaga sp. oral taxon 338
           str. F0234]
 gi|325691561|gb|EGD33529.1| TPR-domain containing protein [Capnocytophaga sp. oral taxon 338
           str. F0234]
          Length = 995

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 69/237 (29%), Gaps = 70/237 (29%)

Query: 54  VRYQREVYEK-----AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQ 104
                ++Y+K     A+    + N+ +A  YF +                 + +      
Sbjct: 415 TSADEKIYQKVAFFYALQLYADGNYKEALSYFQKAQ-----GKSNELLRARAIYWSGETH 469

Query: 105 YSAGKYQQAASLGEEYITQ-------YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
           Y   +Y +A     ++++        YP        YY +G +           Q+    
Sbjct: 470 YQLQQYAEAQKDFHDFLSLGLKSAPEYPN------AYYGLGYALFN--------QKKYLE 515

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV---------- 207
             +  S+ +E    +  +  A          LA     IG+Y+     Y           
Sbjct: 516 ATENFSKYIETKPTASRLADAHLR-------LADSYFAIGKYWPAMENYNKVMTINVGDT 568

Query: 208 --AA----------------IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
             AA                I      + NY  +   E+A+  L   YVA    ++A
Sbjct: 569 DYAAFQKAISYGIVDRVPKKIEELNAFIKNYPKSNLREDAIYELANTYVAQGNNEKA 625



 Score = 42.8 bits (100), Expect = 0.046,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 50/183 (27%), Gaps = 26/183 (14%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              +   + + KA  Y                 L    +  Y    YQ+A       I  
Sbjct: 251 GESYFNLKQYDKAIPYLEAYRGKK--GKYTNTDLYYLGYAYYKQKDYQKAIGQFNRIIDG 308

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
             +++     YY +   Y    +         +  L       +      +V   +    
Sbjct: 309 --KNEVAQNAYYHLAECYLNTNQK--------QQALNAFRNASQM----NFVPEIKKDAH 354

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
           +   +L+         Y     Y +     Q  +  Y + +H +E    LV++Y+     
Sbjct: 355 LNYARLS---------YEVGNAYESTPEVIQSYMETYPN-DHTQELKELLVDSYITSGNF 404

Query: 244 DEA 246
             A
Sbjct: 405 QSA 407



 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 32/261 (12%), Positives = 73/261 (27%), Gaps = 65/261 (24%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD-------FPFAGVARKSLLMSAFVQY 105
           ++   R +Y       + Q +++A + F+            +P A           +  +
Sbjct: 455 ELLRARAIYWSGETHYQLQQYAEAQKDFHDFLSLGLKSAPEYPNAYYG------LGYALF 508

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA---------------QMIRDVPY 150
           +  KY +A     +YI   P +  +   +  +  SY                  I     
Sbjct: 509 NQKKYLEATENFSKYIETKPTASRLADAHLRLADSYFAIGKYWPAMENYNKVMTINVGDT 568

Query: 151 DQRATKLMLQY------------MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           D  A +  + Y            ++  ++ Y  S   + A + +          E     
Sbjct: 569 DYAAFQKAISYGIVDRVPKKIEELNAFIKNYPKSNLREDAIYELANTYVAQGNNEKAAAL 628

Query: 199 ------------------------YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
                                    Y K      A+  F+ +   Y ++  A +A+    
Sbjct: 629 YQQLQNQYQGGTYTARAMLREGLMLYNKNENQK-ALTVFRKITEKYPNSPEAMQAINTAK 687

Query: 235 EAYVALALMDEAREVVSLIQE 255
             YV +  +++  +    +  
Sbjct: 688 SIYVEMGKVEQYAQWAKSLGY 708


>gi|78049049|ref|YP_365224.1| hypothetical protein XCV3493 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78037479|emb|CAJ25224.1| putative membrane protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 605

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 38/111 (34%), Gaps = 9/111 (8%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           ++    +     VC L   +   + D  L    D   Q+ + +  V   ++ +F+ A + 
Sbjct: 324 FRRRAVVAVLAMVCVLPLAQPAHAADGTLWQRADQVQQQRL-DAGVQAYRKGDFAAAQKA 382

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           F              + L          G+Y  A +  +  + Q+P  ++ 
Sbjct: 383 FEAVP--------TDEGLYNLGNALARQGQYDAAIAAYDRALKQHPNQQDA 425


>gi|42524768|ref|NP_970148.1| hypothetical protein Bd3409 [Bdellovibrio bacteriovorus HD100]
 gi|39576978|emb|CAE78207.1| hypothetical protein Bd3409 [Bdellovibrio bacteriovorus HD100]
          Length = 940

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 51/132 (38%), Gaps = 12/132 (9%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA-RKSLLMSAFVQYSAGKYQQAASL 116
              Y +  ++++ +N++KA + + +  + +P    +   +    A   +   KY Q+   
Sbjct: 432 EAAYRRGDVWVRGKNYAKAVDEYQKALKKYPEGQSSYPNAFFNQAESLFMMNKYPQSLDT 491

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML--QYMSRIVERYTNSPY 174
             E++ ++P S +  +    +G    +++     D+          Y      RY  +P 
Sbjct: 492 YREFVKKFPSSNHSAFAMTRMG----ELLEIFGADKSRVMGAYLETYF-----RYGETPN 542

Query: 175 VKGARFYVTVGR 186
              AR  +   R
Sbjct: 543 AVIARLRLLSTR 554



 Score = 42.8 bits (100), Expect = 0.058,   Method: Composition-based stats.
 Identities = 21/201 (10%), Positives = 69/201 (34%), Gaps = 27/201 (13%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI--TQYPESK 128
           +++ +A + + +    +P + +A ++ + + F+    G    +  L +E+I    +   +
Sbjct: 330 KDYDEAMQKYKEAVAKYPRSPLAERTSVKTGFLALEKGDALNSLRLFQEHIDNKNFSGKE 389

Query: 129 NV--DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
           +V  D     +G+++ ++ +            +    ++ +              V    
Sbjct: 390 SVSKDLARLGMGLAFMKLNKWTD--------AIAQFDQVEKE------AFNRDLKVEAAY 435

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS-DAEHAEEAMARLVEAYVALALMDE 245
            +        G  +++   Y  A+  +Q  L  Y         A     E+   +    +
Sbjct: 436 RR--------GDVWVRGKNYAKAVDEYQKALKKYPEGQSSYPNAFFNQAESLFMMNKYPQ 487

Query: 246 AREVVSLIQERYPQGYWARYV 266
           + +      +++P    + + 
Sbjct: 488 SLDTYREFVKKFPSSNHSAFA 508


>gi|242040831|ref|XP_002467810.1| hypothetical protein SORBIDRAFT_01g034480 [Sorghum bicolor]
 gi|241921664|gb|EER94808.1| hypothetical protein SORBIDRAFT_01g034480 [Sorghum bicolor]
          Length = 630

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 46/152 (30%), Gaps = 27/152 (17%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF----P--------FAGVARKSL-LMSA 101
               ++        KE  F  A   +++  R++    P        FA  +R SL L  A
Sbjct: 402 DEADKIKNTGNRLFKEGKFELAKAKYDKVLREYNHVHPHDDDEGKIFAN-SRSSLHLNVA 460

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           F     G+Y+++     + +   P         Y  G S+  +                 
Sbjct: 461 FCYQKMGEYRKSIETCNKVLDANPVHVK---ALYRRGTSFMLL--------GEFDDARND 509

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
             +I+    +S     A   +   + +    E
Sbjct: 510 FEKIITVDKSSE--PDATAALLKLKQKEQEAE 539


>gi|193216010|ref|YP_001997209.1| TPR repeat-containing protein [Chloroherpeton thalassium ATCC
           35110]
 gi|193089487|gb|ACF14762.1| TPR repeat-containing protein [Chloroherpeton thalassium ATCC
           35110]
          Length = 595

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 69/200 (34%), Gaps = 28/200 (14%)

Query: 64  AVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
            V +L  + +++A             +     +         +S+ ++Q A +  E+ ++
Sbjct: 320 GVCYLNLERYNEAISVLKLAID----YDPSKPQIYSNLGTAYFSSDRFQDAIAAFEKAVS 375

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVP-----------YDQRATKLMLQYMSRIVERYTN 171
               +  + Y YY +G+SY  +   +                  K      +   ER+  
Sbjct: 376 L---NDKLAYPYYGIGISYYSLESKMNMLSSLNASIYVRSGSLGKNANAAKN---ERF-- 427

Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
              +     +    R  LA+    +G  YL+ G +  AI  F   +    +     +A A
Sbjct: 428 -QNIIEPLEHAVKLRPDLASAHFGLGMAYLETGLFGKAIEAFNQAVRFNPE---FAQAFA 483

Query: 232 RLVEAYVALALMDEAREVVS 251
            L   Y+ L    EA++ + 
Sbjct: 484 GLGSVYMKLGYKGEAKKALE 503



 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 49/344 (14%), Positives = 97/344 (28%), Gaps = 98/344 (28%)

Query: 1   MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
           M             +  + +KF L     +     +    +S+      S       + +
Sbjct: 1   MQTTSKTTEANLVFYLNKPHKFLLFKGLPVFFLIGICLFSKSAFSTPPPSDFRATLPQAL 60

Query: 61  YEKAVL---------FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
            + A           +LK +N  ++   F   +     +    K+ +       + G  Q
Sbjct: 61  DDSAKAVHNCELGYKYLKAKNTQQSLLAFQAATSA---SPSCSKAFVGLGDAYVAQGNDQ 117

Query: 112 QAASLGEEYITQYPESKNV------DYV---YYLVGMSYAQMIRDVPYDQRAT------- 155
           +A +  E+ I   PE+ N        Y+    Y     YA+       D  +        
Sbjct: 118 KAIAAYEQAIRLNPENVNAYDGLSLVYMKTWQYEKAALYAEKAIQYQPDLTSAQIRLSMA 177

Query: 156 -------KLMLQY-------MSRIVERYTNSPYVKGA---------------RFYVT--- 183
                  +   Q        +   +  + +S   + A                 Y+    
Sbjct: 178 QFQLRQFQEAFQSMNIAQNLLKETLRHHPDSTDARKALGMAYLISGDWNSALSQYIVLKD 237

Query: 184 -----------VGRNQLAAKEVE---------------IGRY---------YLKRGEYVA 208
                         +Q A +E++                GR+         YL++ EY  
Sbjct: 238 QDSVLAAELYQEILSQKAEQELQLEFFESMLHKRDVKKAGRFEANFQLGSAYLRKQEYEK 297

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           AI  ++  L    +     +A+  L   Y+ L   +EA  V+ L
Sbjct: 298 AIEFYKAALEIKPNT---VDALNALGVCYLNLERYNEAISVLKL 338


>gi|148910632|gb|ABR18386.1| unknown [Picea sitchensis]
          Length = 486

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 43/142 (30%), Gaps = 31/142 (21%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLL--MSAFVQYSA 107
            +D+    E+   A    +   FS+A E +      +      ++ ++     AF     
Sbjct: 9   TSDIERAEEIKAIANAAFQAHKFSRAIELYSQAIELN------SQNAVYWANRAFAHTKL 62

Query: 108 GKYQQAASLGEEYITQYPESKNVD--Y--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
            +Y  A             +  +D  Y   YY  G +Y  M           K  L+   
Sbjct: 63  EEYGSAIQDAT-------TAVEIDAKYTKGYYRRGAAYLAM--------GKFKEALKDFQ 107

Query: 164 RIVERYTNSPYVKGARFYVTVG 185
           ++ +   N P    A   +   
Sbjct: 108 QVKKICPNDP---DATKKLKEC 126


>gi|157374998|ref|YP_001473598.1| TPR repeat-containing protein [Shewanella sediminis HAW-EB3]
 gi|157317372|gb|ABV36470.1| tetratricopeptide TPR_2 repeat protein [Shewanella sediminis
           HAW-EB3]
          Length = 242

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 43/116 (37%), Gaps = 14/116 (12%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           QR     +   S  +++Y NS Y   A +++                    +GE+V A  
Sbjct: 135 QRKYDEAIPAFSDFIKQYPNSTYAANANYWLGQLL--------------YNKGEFVTAKK 180

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
            F+ V+  +S++    +++ +L         +  A+     + + Y     AR  +
Sbjct: 181 AFETVVNQFSESNKRGDSLVKLGMIAEKTGNISSAKVYYQKVVKEYANSAAARIAK 236



 Score = 44.0 bits (103), Expect = 0.021,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 39/124 (31%), Gaps = 22/124 (17%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
              KY +A     ++I QYP S       Y +G         V           +    +
Sbjct: 134 KQRKYDEAIPAFSDFIKQYPNSTYAANANYWLGQLLYNKGEFVT--------AKKAFETV 185

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           V +++ S     +   + +                 K G   +A   +Q V+  Y+++  
Sbjct: 186 VNQFSESNKRGDSLVKLGMIAE--------------KTGNISSAKVYYQKVVKEYANSAA 231

Query: 226 AEEA 229
           A  A
Sbjct: 232 ARIA 235



 Score = 38.6 bits (89), Expect = 0.88,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 32/78 (41%), Gaps = 1/78 (1%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
           +S      S +    +   YE AV   LK++ + +A   F+   + +P +  A  +    
Sbjct: 106 TSSSEVNPSASSTLGETASYEHAVNLVLKQRKYDEAIPAFSDFIKQYPNSTYAANANYWL 165

Query: 101 AFVQYSAGKYQQAASLGE 118
             + Y+ G++  A    E
Sbjct: 166 GQLLYNKGEFVTAKKAFE 183


>gi|320538333|ref|ZP_08038214.1| tetratricopeptide repeat protein [Treponema phagedenis F0421]
 gi|320144832|gb|EFW36567.1| tetratricopeptide repeat protein [Treponema phagedenis F0421]
          Length = 318

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 75/227 (33%), Gaps = 45/227 (19%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
             + VC L       S+D                   +      ++S A   F +  +  
Sbjct: 5   LLLCVCILFSSAFSFSQDYL--------------TAGLDAYARSDWSSAIFSFQKAMK-- 48

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
           P +    ++         SA  YQ A +  E++I   P S+ +  V Y  G         
Sbjct: 49  PQSAQYNEAWYWLIMAHASAHNYQIALTQAEKFIQANPRSQRMPEVVYQRG--------R 100

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
           +     A +  +  +   ++R+TN   V  A ++              IG      G + 
Sbjct: 101 IFCLCGAHENSINELYAFIKRWTNHSQVPSAYYW--------------IGENLYLTGRFP 146

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
            A   F  +L ++  +   E A          +AL+D+++    L++
Sbjct: 147 EARSIFSRILIDHPQSAKVEAARY-------KIALIDQSKTQEELLK 186


>gi|242280662|ref|YP_002992791.1| hypothetical protein Desal_3201 [Desulfovibrio salexigens DSM 2638]
 gi|242123556|gb|ACS81252.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio salexigens
           DSM 2638]
          Length = 571

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 73/212 (34%), Gaps = 36/212 (16%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQC 83
            +   +A  +      + S+ +Y  ++        + Y    L  +E+N+++A ++F   
Sbjct: 392 VLVVLLAGAYTQAGHWKDSKALYTRALAVTENNHHMHYNYGNLLEREKNYTEAAKHFKAA 451

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL--VGMSY 141
            +  P +    K++   A +    G    A  L +  +   P     DY   L   G+ Y
Sbjct: 452 FKADP-SHY--KAMTSLASILSRKGDPYTALDLYQRALQINP-----DYAPALGNRGIVY 503

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            Q        Q   +  +  + +  +     P             N +    + +G  Y 
Sbjct: 504 MQ--------QGKFESAIADIRKAQQLEPQQP-------------NHM----INMGLLYY 538

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
            RG+  AA    +  L    + + A + +A +
Sbjct: 539 MRGDNSAAKEWLRRALQVDPNNKLARKNLALI 570


>gi|16127458|ref|NP_422022.1| hypothetical protein CC_3228 [Caulobacter crescentus CB15]
 gi|221236271|ref|YP_002518708.1| Tol system periplasmic component YbgF [Caulobacter crescentus
           NA1000]
 gi|13424912|gb|AAK25190.1| hypothetical protein CC_3228 [Caulobacter crescentus CB15]
 gi|220965444|gb|ACL96800.1| Tol system periplasmic component YbgF [Caulobacter crescentus
           NA1000]
          Length = 284

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 35/103 (33%), Gaps = 14/103 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              Q  +  V  Y  S     AR+++   +                R  Y  A   +   
Sbjct: 177 NAEQAFAAYVNNYPESARTPEARYWLGETQ--------------FVREAYTDAAGNYIGA 222

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           +  +     A +A  +L  + VAL    EA   +  + +RYP+
Sbjct: 223 IRGWPQTSWAPDATLKLARSMVALRKTTEACRTLDELAKRYPK 265



 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 17/113 (15%), Positives = 40/113 (35%), Gaps = 8/113 (7%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           +++A   L   +++ A + F     ++P +    ++       Q+    Y  AA      
Sbjct: 163 FKQAKDLLLAGDYANAEQAFAAYVNNYPESARTPEARYWLGETQFVREAYTDAAGNYIGA 222

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
           I  +P++         +  S   +        R T    + +  + +RY  +P
Sbjct: 223 IRGWPQTSWAPDATLKLARSMVAL--------RKTTEACRTLDELAKRYPKAP 267


>gi|114567177|ref|YP_754331.1| hypothetical protein Swol_1662 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|114338112|gb|ABI68960.1| hypothetical protein Swol_1662 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 416

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 45/122 (36%), Gaps = 8/122 (6%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D+  ++  Y +        ++ KA             + + R++L   A V Y   +Y+ 
Sbjct: 290 DLEQEKWYYSEGYQAYLAGDYKKATSNLGMVVSMQSKSFLHREALYYLARVYYINSEYKN 349

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A     +Y   +P +   D   + +G  Y        +DQ+      Q + ++ E   +S
Sbjct: 350 AEKYFLDYTRDFPSTNYYDESLFYLGCIYY-------FDQQE-DKARQALEKLREVVPDS 401

Query: 173 PY 174
            Y
Sbjct: 402 GY 403



 Score = 42.4 bits (99), Expect = 0.061,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 27/69 (39%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
             + R Y    EY  A   F     ++    + +E++  L   Y      D+AR+ +  +
Sbjct: 335 YYLARVYYINSEYKNAEKYFLDYTRDFPSTNYYDESLFYLGCIYYFDQQEDKARQALEKL 394

Query: 254 QERYPQGYW 262
           +E  P   +
Sbjct: 395 REVVPDSGY 403


>gi|126728388|ref|ZP_01744204.1| hypothetical protein SSE37_20397 [Sagittula stellata E-37]
 gi|126711353|gb|EBA10403.1| hypothetical protein SSE37_20397 [Sagittula stellata E-37]
          Length = 266

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/122 (10%), Positives = 40/122 (32%), Gaps = 16/122 (13%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA-- 113
            +   +  A   L   + ++A + F    + +P + +   +L+       + G  ++A  
Sbjct: 140 SEEADFRTAQDALDTGDHARASDLFANFRQTYPGSPLESAALVGEGQALEAQGDTREAAR 199

Query: 114 --ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
                   +    P+ +      + +G +  ++         +       ++ +  RY  
Sbjct: 200 RYLDAYSRF----PDDQVAPEALWRLGETLGKL--------GSVSEACVTLAEVGNRYPG 247

Query: 172 SP 173
           S 
Sbjct: 248 SE 249



 Score = 44.0 bits (103), Expect = 0.021,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 37/112 (33%), Gaps = 14/112 (12%)

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
            D           +   + Y  SP    A   V  G+   A             G+   A
Sbjct: 152 LDTGDHARASDLFANFRQTYPGSPLESAAL--VGEGQALEAQ------------GDTREA 197

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             R+    + + D + A EA+ RL E    L  + EA   ++ +  RYP   
Sbjct: 198 ARRYLDAYSRFPDDQVAPEALWRLGETLGKLGSVSEACVTLAEVGNRYPGSE 249


>gi|15606205|ref|NP_213582.1| hypothetical protein aq_854 [Aquifex aeolicus VF5]
 gi|2983399|gb|AAC06984.1| hypothetical protein aq_854 [Aquifex aeolicus VF5]
          Length = 545

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 78/244 (31%), Gaps = 47/244 (19%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
             L+L+E+ F +A E +      +P +    K L   A +  ++G+ ++A  + E+ I  
Sbjct: 192 GNLYLQEKKFKEAEELYKSVLEKYPNSP---KILEKLAKLYTASGRIEEAIKIYEKLINL 248

Query: 124 YPESKN--VDYVYYLVGMSYAQMIRDV--------PYDQRAT-------------KLMLQ 160
            P + N   +Y   L+        + +        P +                 K   +
Sbjct: 249 KPRNVNYKTEYALLLLSTGEFDKAKKILEELYYVNPSNPNVAFAYALTLEATGELKKAKE 308

Query: 161 YMSRIVERYTNSPYVKGA-------------RFYVTVGRNQLA--AKEVEI--GRYYLKR 203
               ++ R+  +  V                   +      LA   KE+      YY K 
Sbjct: 309 IYENLLNRFPENIKVIERLIGIYLDLGNYEDAKRLIEKAKVLAPDKKEILFLEADYYSKT 368

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG-YW 262
            +Y  A+   + +  +Y +              Y  L  +  A + +    E  P+   +
Sbjct: 369 KQYDKALEILKKLEKDYPNDSRVY---FMEAIVYDNLGDIKNAEKALRKAIELDPENPDY 425

Query: 263 ARYV 266
             Y+
Sbjct: 426 YNYL 429



 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 87/240 (36%), Gaps = 37/240 (15%)

Query: 50  SVTDVRYQREVYEKAVL-FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS-A 107
           S  +     E+Y+  +   L+ + + KA E   +    +P      ++ +   +  Y   
Sbjct: 41  SALEKIPSPELYKDTIKVLLRNKEYEKAKELAKEFLETYPDEP---QAYIYL-YTIYKFL 96

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            + ++A  + +E    +P ++NV  V +L    Y              +   + +   +E
Sbjct: 97  KEDKKAFEVIKEAYKSFPFNENV--VLFL-ANEYINK--------GKLREAEKVLLEYME 145

Query: 168 RYTNSP---------YVK--GARFYVTVGRNQLAAKEVEI------GRYYLKRGEYVAAI 210
              ++P         Y+     +  +      L  K+         G  YL+  ++  A 
Sbjct: 146 TDPDNPLPYYLLGRIYLAKGDIQKGMEYFLKALEKKKYYAPAVLSLGNLYLQEKKFKEAE 205

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
             ++ VL  Y ++    E +A+L   Y A   ++EA ++   +    P+    +    L+
Sbjct: 206 ELYKSVLEKYPNSPKILEKLAKL---YTASGRIEEAIKIYEKLINLKPRNVNYKTEYALL 262


>gi|308049996|ref|YP_003913562.1| tol-pal system protein YbgF [Ferrimonas balearica DSM 9799]
 gi|307632186|gb|ADN76488.1| tol-pal system protein YbgF [Ferrimonas balearica DSM 9799]
          Length = 244

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 38/125 (30%), Gaps = 24/125 (19%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
              ++  A      +I QYP+S      YY +G             Q          + +
Sbjct: 138 KERRFDDAIPAFRRFIEQYPDSSYTPNAYYWLGQLLYN--------QGQLAEAGTMFATV 189

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR-FQLVLANYSDAE 224
            ++Y  S     +     +  ++   K               A   R F+ V++ YS + 
Sbjct: 190 ADKYPKSSKRSDSLLKQGLIADRQGDK---------------ATAQRFFKQVISEYSGSS 234

Query: 225 HAEEA 229
            A  A
Sbjct: 235 AANMA 239



 Score = 39.3 bits (91), Expect = 0.52,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 46/128 (35%), Gaps = 9/128 (7%)

Query: 56  YQREVYEKAVL-FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
            + + Y +A+    KE+ F  A   F +    +P +     +      + Y+ G+  +A 
Sbjct: 124 SEADAYTQALNLATKERRFDDAIPAFRRFIEQYPDSSYTPNAYYWLGQLLYNQGQLAEAG 183

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
           ++      +YP+S          G+   +                ++  +++  Y+ S  
Sbjct: 184 TMFATVADKYPKSSKRSDSLLKQGLIADRQGDKAT--------AQRFFKQVISEYSGSSA 235

Query: 175 VKGARFYV 182
              A+ ++
Sbjct: 236 ANMAQKHL 243



 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 2/70 (2%)

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           K   +  AIP F+  +  Y D+ +   A   L +       + EA  + + + ++YP+  
Sbjct: 138 KERRFDDAIPAFRRFIEQYPDSSYTPNAYYWLGQLLYNQGQLAEAGTMFATVADKYPKSS 197

Query: 262 WARYVETLVK 271
             +  ++L+K
Sbjct: 198 --KRSDSLLK 205



 Score = 35.5 bits (81), Expect = 8.7,   Method: Composition-based stats.
 Identities = 14/120 (11%), Positives = 33/120 (27%), Gaps = 14/120 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
                ++   +R     +    R +E+Y +S Y   A +++                   
Sbjct: 129 YTQALNLATKERRFDDAIPAFRRFIEQYPDSSYTPNAYYWLGQLL--------------Y 174

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            +G+   A   F  V   Y  +    +++ +             A+     +   Y    
Sbjct: 175 NQGQLAEAGTMFATVADKYPKSSKRSDSLLKQGLIADRQGDKATAQRFFKQVISEYSGSS 234


>gi|307153690|ref|YP_003889074.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822]
 gi|306983918|gb|ADN15799.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822]
          Length = 275

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 75/244 (30%), Gaps = 32/244 (13%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           K  +    ++A+   +      +               E+Y   V  L   N++ A   F
Sbjct: 2   KQTIRALGTLALVTNMIVISSVAVAQTQPPPQKQLNAVELYNNGVDKLSAANYTGAIADF 61

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV----DYVYYL 136
            Q     P       +    A+     G +++A +   + +   P          YVY+L
Sbjct: 62  TQAIALAPNDP---DAYYNRAYAYLILGDFEKAVADYSQALQINPNYTYAYGNRCYVYFL 118

Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
               Y   I D           +   +   + Y    Y   A+  +   +  L+  E  I
Sbjct: 119 S-KKYEAAITDCD-------KAISLQADYADFY---IYRGNAKSELNQNQEALSDYEKAI 167

Query: 197 ----------GRYYLKRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALAL 242
                      + +  RG    ++   +  +A+Y+D+        +A      +Y AL  
Sbjct: 168 SLAANNPKTRAKAFYNRGRTYQSLENHKQAIADYTDSIALNPDDGDAYYNRAASYYALGN 227

Query: 243 MDEA 246
             EA
Sbjct: 228 NQEA 231


>gi|94967318|ref|YP_589366.1| polysaccharide deacetylase [Candidatus Koribacter versatilis
           Ellin345]
 gi|94549368|gb|ABF39292.1| polysaccharide deacetylase [Candidatus Koribacter versatilis
           Ellin345]
          Length = 871

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/138 (16%), Positives = 48/138 (34%), Gaps = 16/138 (11%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG-VARKSLLMSAFVQYSAG 108
             +  +    + ++ +   KE+ + +A   F + +   P     A      + F  +   
Sbjct: 747 EPSSPKSAFALNDEGMRLYKEKKYEEALAKFKEAAELAPTNALFAN----NTGFAFFRLA 802

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           KY +AA   ++ IT  P S+ + YV           + D           L+   + +E 
Sbjct: 803 KYAEAAEWYQKSITIDP-SRAIAYV----------NLGDADLKVDKRDDALKAFQKYLEL 851

Query: 169 YTNSPYVKGARFYVTVGR 186
             N    +  R  V+  +
Sbjct: 852 MPNGKSAEYVRAKVSELQ 869


>gi|239501632|ref|ZP_04660942.1| hypothetical protein AbauAB_04911 [Acinetobacter baumannii AB900]
          Length = 294

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 42/120 (35%), Gaps = 17/120 (14%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG--EYVAA 209
           Q   K  +  M   ++ + NS Y   A F++                ++L      Y  A
Sbjct: 189 QGGAKKAIAPMQNFIKNHPNSIYTGNAYFWL--------------AEFHLATDPVNYNEA 234

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVE-AYVALALMDEAREVVSLIQERYPQGYWARYVET 268
              + +V   Y ++  A  A+ +L   A         A +  + +  +YP+   A++   
Sbjct: 235 KKNYNVVANQYPNSSKAPRALYQLYSIAKDVDKNTVSANQYKNKLLSQYPKSEEAKFFNK 294



 Score = 44.0 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 41/122 (33%), Gaps = 9/122 (7%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG--KYQQAA 114
           ++  Y  A+   K+    KA        ++ P +     +    A    +     Y +A 
Sbjct: 176 EKAAYTVALDAYKQGGAKKAIAPMQNFIKNHPNSIYTGNAYFWLAEFHLATDPVNYNEAK 235

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
                   QYP S       Y +      + +DV    + T    QY ++++ +Y  S  
Sbjct: 236 KNYNVVANQYPNSSKAPRALYQL----YSIAKDVD---KNTVSANQYKNKLLSQYPKSEE 288

Query: 175 VK 176
            K
Sbjct: 289 AK 290



 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 28/79 (35%), Gaps = 8/79 (10%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR-DVPYDQRATKLMLQYMS 163
           Y  G  ++A +  + +I  +P S          G +Y  +    +  D        +  +
Sbjct: 187 YKQGGAKKAIAPMQNFIKNHPNSIYT-------GNAYFWLAEFHLATDPVNYNEAKKNYN 239

Query: 164 RIVERYTNSPYVKGARFYV 182
            +  +Y NS     A + +
Sbjct: 240 VVANQYPNSSKAPRALYQL 258


>gi|110165339|gb|ABG49879.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Trichodesmium
           erythraeum IMS101]
          Length = 559

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/134 (8%), Positives = 40/134 (29%), Gaps = 20/134 (14%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSL 97
           ++  +++     +     + Y++ +   ++Q++  A   F++                + 
Sbjct: 420 ENPTEIFTKIENEQIEFNDFYQRGLAKYEQQDYQSALAEFDRAIDIDSSH------IDAY 473

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
           +     +     Y+ A +   E I            YY           +V      ++ 
Sbjct: 474 IYRGDAKDKLEDYEGAIADYNEAIKIDSSHPK---AYYSR--------ENVLRKAGDSRE 522

Query: 158 MLQYMSRIVERYTN 171
            +    + ++   N
Sbjct: 523 AIADYDQAIKLDPN 536


>gi|145297816|ref|YP_001140657.1| hypothetical protein ASA_0747 [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142850588|gb|ABO88909.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 255

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 39/124 (31%), Gaps = 22/124 (17%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               Y +A    E +I QYP S  V   +Y +G                        S +
Sbjct: 147 KDKNYDKAIPAFEGFIKQYPSSSYVPNAHYWLGQLLFNKGDRTG--------AAAQFSTV 198

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
             +++ SP        + +   QL  K+ E   +Y             + V+  Y +   
Sbjct: 199 ANKFSKSPKRADGLLKLGML-AQLDGKKAEAKTFY-------------EQVIKGYPNTSP 244

Query: 226 AEEA 229
           A+ A
Sbjct: 245 AQLA 248



 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 48/134 (35%), Gaps = 17/134 (12%)

Query: 57  QREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           + + Y+ AV   LK++N+ KA   F    + +P +     +      + ++ G    AA+
Sbjct: 134 ENQAYDAAVNMVLKDKNYDKAIPAFEGFIKQYPSSSYVPNAHYWLGQLLFNKGDRTGAAA 193

Query: 116 L----GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
                  ++      S         +GM           D +       +  ++++ Y N
Sbjct: 194 QFSTVANKFSK----SPKRADGLLKLGM-------LAQLDGKKA-EAKTFYEQVIKGYPN 241

Query: 172 SPYVKGARFYVTVG 185
           +   + A+  ++  
Sbjct: 242 TSPAQLAKQSLSKL 255


>gi|224043182|ref|XP_002188878.1| PREDICTED: intraflagellar transport 88 homolog (Chlamydomonas)
           isoform 2 [Taeniopygia guttata]
          Length = 823

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/283 (13%), Positives = 79/283 (27%), Gaps = 56/283 (19%)

Query: 6   GRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAV 65
              + +FE    ++   A T    +   +L     Q++    L   +D      +  K  
Sbjct: 436 LETLKMFEKKDSRVKSAAATNLSFLY--YLGNELEQATNYADLAVNSDRYNPAALTNKGN 493

Query: 66  LFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
                 +  KA E++      D     +  ++L           +  +A      ++  +
Sbjct: 494 TIFANGDCEKAAEFYKEALRND----SLCTEALYNLGLAYKKLNRIDEALDC---FLKLH 546

Query: 125 PESKNVDYVYYLVGMSY-------------AQMIRDVPYDQ-------------RATKLM 158
               N   V Y +   Y              Q+I  VP D                    
Sbjct: 547 AILPNSAQVLYQLASIYQIMEDPNQAIEWLLQLISVVPTDPHVLSKLGNLYDTEGDKSQA 606

Query: 159 LQYMSRIVERYT--------------NSPYVKGARFYVTVGRNQL---AAKEVEIGRYYL 201
             Y       +               ++ + + A  Y       L      ++ +   Y 
Sbjct: 607 FHYYCESYRYFPSNIEVIEWLGAYYIDTQFCEKAIEYFERAALILPTQVKWQLMVASCYR 666

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
           + G Y  A+ +++++   + D     E +  LV     + L +
Sbjct: 667 RSGNYQKALEKYKVIHRKFPD---NVECLRFLVRLCTDMGLKE 706


>gi|108761531|ref|YP_631209.1| putative lipoprotein [Myxococcus xanthus DK 1622]
 gi|27804879|gb|AAO22913.1| YgbF-like protein [Myxococcus xanthus]
 gi|108465411|gb|ABF90596.1| putative lipoprotein [Myxococcus xanthus DK 1622]
          Length = 286

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/134 (11%), Positives = 34/134 (25%), Gaps = 32/134 (23%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYY-----LVGMSYAQMIRDVPYDQRATKLMLQ 160
             G  +        +  + P     D   Y      +G++               K   +
Sbjct: 176 RTGNVEGGVEKLRRFADENPRHPRADNALYFSGLGQIGLNEF-------------KGAAK 222

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
              R++++Y     +      +   R +L                   A   +  V+  +
Sbjct: 223 TFERLIDKYPAGDAMLDGMLRLAECRMRLNQS----AD----------AKVLYTRVVTQF 268

Query: 221 SDAEHAEEAMARLV 234
                A +A  RL 
Sbjct: 269 PGTAAATQAEQRLA 282



 Score = 36.6 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 26/78 (33%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           ++    R    +Y   +  +    F  A + F +    +P        +L  A  +    
Sbjct: 193 ENPRHPRADNALYFSGLGQIGLNEFKGAAKTFERLIDKYPAGDAMLDGMLRLAECRMRLN 252

Query: 109 KYQQAASLGEEYITQYPE 126
           +   A  L    +TQ+P 
Sbjct: 253 QSADAKVLYTRVVTQFPG 270



 Score = 35.1 bits (80), Expect = 9.9,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 46/143 (32%), Gaps = 10/143 (6%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
           + D       DV      ++KAV  L+  N     E   + + + P    A  +L  S  
Sbjct: 152 NEDAGEQQDPDVLDAE--FDKAVNMLRTGNVEGGVEKLRRFADENPRHPRADNALYFSGL 209

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
            Q    +++ AA   E  I +YP    +      +     ++ +                
Sbjct: 210 GQIGLNEFKGAAKTFERLIDKYPAGDAMLDGMLRLAECRMRLNQSAD--------AKVLY 261

Query: 163 SRIVERYTNSPYVKGARFYVTVG 185
           +R+V ++  +     A   +   
Sbjct: 262 TRVVTQFPGTAAATQAEQRLAAL 284


>gi|308270259|emb|CBX26871.1| hypothetical protein N47_A09000 [uncultured Desulfobacterium sp.]
          Length = 337

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/134 (12%), Positives = 40/134 (29%), Gaps = 43/134 (32%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
             R  +++A  F  +  ++ + + + Q    +P A    K+L     +            
Sbjct: 39  PARSTFKEANDFFNQGFYTASLKKYEQIIEKYPTA--GDKALFEMGIIY----------- 85

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
                   YP +   DY                       +  L+   ++++ Y  S Y 
Sbjct: 86  -------MYPGNALKDY-----------------------QKSLKCFDQLIKNYPESAYR 115

Query: 176 KGARFYVTVGRNQL 189
             +   ++   N +
Sbjct: 116 TDSEVMISFINNAI 129



 Score = 43.6 bits (102), Expect = 0.028,   Method: Composition-based stats.
 Identities = 11/75 (14%), Positives = 34/75 (45%), Gaps = 6/75 (8%)

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV----ALALMDEAREVVSLIQE 255
           +  +G Y A++ +++ ++  Y      ++A+  +   Y+    AL    ++ +    + +
Sbjct: 50  FFNQGFYTASLKKYEQIIEKYPT--AGDKALFEMGIIYMYPGNALKDYQKSLKCFDQLIK 107

Query: 256 RYPQGYWARYVETLV 270
            YP+  +    E ++
Sbjct: 108 NYPESAYRTDSEVMI 122


>gi|281420092|ref|ZP_06251091.1| putative BatD protein [Prevotella copri DSM 18205]
 gi|281405892|gb|EFB36572.1| putative BatD protein [Prevotella copri DSM 18205]
          Length = 866

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 9/69 (13%), Positives = 23/69 (33%), Gaps = 3/69 (4%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
             A    ++ N+ +A   + +   ++   GV+ +         Y      +A    E   
Sbjct: 641 NNADTEYQKGNYQQAIRDYEEILNNY---GVSAEVYYNLGNAYYRTDNITKAVLNYERAH 697

Query: 122 TQYPESKNV 130
              P  +++
Sbjct: 698 LLSPGDEDI 706


>gi|126727498|ref|ZP_01743332.1| hypothetical protein RB2150_16427 [Rhodobacterales bacterium
           HTCC2150]
 gi|126703278|gb|EBA02377.1| hypothetical protein RB2150_16427 [Rhodobacterales bacterium
           HTCC2150]
          Length = 186

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 38/128 (29%), Gaps = 14/128 (10%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +  +    L E     A ++F   +   P    A    L  A   Y A  +  A +  E 
Sbjct: 69  LLRRGKNALDEGEVEAALQHFTALTDHAP--DFAEGWQLR-ATAFYLAELFAPAMADLER 125

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +T  P        Y+ +G+    +           +  L      +  + NS  +K   
Sbjct: 126 AVTLNPNHFG---AYHGIGIISELL--------EFNEQALNAYEAAIAIHPNSTDIKEGL 174

Query: 180 FYVTVGRN 187
             V    N
Sbjct: 175 KRVQALLN 182


>gi|113476015|ref|YP_722076.1| hypothetical protein Tery_2383 [Trichodesmium erythraeum IMS101]
 gi|110167063|gb|ABG51603.1| TPR repeat [Trichodesmium erythraeum IMS101]
          Length = 1421

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 45/130 (34%), Gaps = 21/130 (16%)

Query: 45   DVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLL--MS 100
            + +  ++       + Y      +++   F++A E F      D      ++ S +    
Sbjct: 915  ENFKKALELEPKDLQTYNNLGAAYVELGEFNEAIELFSQALKVD------SQDSQIYQNL 968

Query: 101  AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
              V++ AG  Q A +   + I   P        YY  G++Y              +  + 
Sbjct: 969  GVVRFKAGDKQGAIADYNQAIKLNPNKPE---AYYNRGIAY--------RFLGHNQDAMN 1017

Query: 161  YMSRIVERYT 170
              +++++ + 
Sbjct: 1018 DFTKVLQLHP 1027



 Score = 40.5 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 62/217 (28%), Gaps = 53/217 (24%)

Query: 59   EVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            E Y        +  +F  A   F +  R  P       +    A      G +  A +  
Sbjct: 1235 EAYNNLGNSRFQTGDFQGAMRDFGETLRIHP--KYVP-AYNNRALALLKLGDFSGATTDC 1291

Query: 118  EEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
             + +   P+     Y   YY +G+ + +M           +  +   + ++  Y      
Sbjct: 1292 YQALKINPK-----YGLAYYNLGLIHTEM--------GDLEQAILDYNEVLRIYP----- 1333

Query: 176  KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE-------- 227
                  +    N+        G  YLK   Y  AI      L    +  H          
Sbjct: 1334 ----RKIDAYVNR--------GLIYLKLKNYTQAIKDQTSALNINPNLPHVYSFRSEGYI 1381

Query: 228  ---------EAMARLVEAYVALALMDEAREVVSLIQE 255
                     + + +  E Y     ++E  +++  I++
Sbjct: 1382 QLGEFKAGIDDLHKAAEIYQQQGKLEERDKMMKRIEK 1418



 Score = 35.5 bits (81), Expect = 8.9,   Method: Composition-based stats.
 Identities = 18/177 (10%), Positives = 48/177 (27%), Gaps = 45/177 (25%)

Query: 53   DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ-------Y 105
            + ++   +Y +A++    ++   + +  N+  +  P                       +
Sbjct: 1060 NPKHPEAIYNRAIIRRLTKDNQGSLDDLNKVIQLHP----------KYIDAYIKRSIVRF 1109

Query: 106  SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
              G ++ A    +  +   P +      YY           +           +      
Sbjct: 1110 DLGDHEGALKDLDSAVQLQPNN---AEAYYQRA--------NTKRSMGDILSAIADFENA 1158

Query: 166  VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
            +       Y               A  ++ I R  L+RG+   A+  F+  +    +
Sbjct: 1159 IRLNP--KY-------------HQAYNDMGIVR--LRRGDISGAMENFEAAIQINPN 1198


>gi|115462585|ref|NP_001054892.1| Os05g0204900 [Oryza sativa Japonica Group]
 gi|55168273|gb|AAV44139.1| putative serine/threonine phosphatase [Oryza sativa Japonica Group]
 gi|113578443|dbj|BAF16806.1| Os05g0204900 [Oryza sativa Japonica Group]
 gi|125551205|gb|EAY96914.1| hypothetical protein OsI_18833 [Oryza sativa Indica Group]
 gi|215678857|dbj|BAG95294.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215736879|dbj|BAG95808.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222630558|gb|EEE62690.1| hypothetical protein OsJ_17493 [Oryza sativa Japonica Group]
          Length = 483

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 42/143 (29%), Gaps = 29/143 (20%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCS---RDFPFAGVARKSLLMSAFVQ 104
           +S  + +   E+  KA    K   FS A E +         +  +   A ++     F  
Sbjct: 4   NSSLNEQKSEELKLKANDAFKANKFSLAIELYSQAIELNSSNAVY--WANRA-----FAH 56

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
               +Y  A     + I       +  Y   YY  G +Y  M           K  L+  
Sbjct: 57  TKLEEYGSAVQDASKAIEI-----DARYSKGYYRRGAAYLAM--------GKFKEALKDF 103

Query: 163 SRIVERYTNSPYVKGARFYVTVG 185
            ++     N P    A   +   
Sbjct: 104 QQVKRISPNDP---DATRKLKEC 123


>gi|186685696|ref|YP_001868892.1| lytic transglycosylase, catalytic [Nostoc punctiforme PCC 73102]
 gi|186468148|gb|ACC83949.1| Lytic transglycosylase, catalytic [Nostoc punctiforme PCC 73102]
          Length = 731

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 72/217 (33%), Gaps = 28/217 (12%)

Query: 55  RYQREVYEKAVLFLKEQNFSK-AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
           +  R +Y  A          + A   + Q  + FP    A  +LL  A      GK    
Sbjct: 259 KTSRNLYRTARGLQVGGKDKEIAIATYKQLVQQFPTTEEAGTALLRLAETA-KTGK--DG 315

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
               E+ I+++P  K           +   +      DQ++     Q    ++ +Y NS 
Sbjct: 316 LPYLEQVISKFP--KQAATALVQKAKTLETL-----KDQKSASAAWQL---LIAKYGNSD 365

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
                           A    +I +   K  +YV A    + ++ N  ++  A  A   +
Sbjct: 366 EA--------------AEYRWKIAQDKAKAKDYVGAWQWAEPIVTNNPNSILAPRAGFWV 411

Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
            +   +L    E++     +  ++P  Y+A     + 
Sbjct: 412 GKWAASLGKQQESQTAYDYVISQFPYSYYAWRAANMR 448


>gi|308271252|emb|CBX27861.1| hypothetical protein N47_C19190 [uncultured Desulfobacterium sp.]
          Length = 571

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 26/73 (35%), Gaps = 4/73 (5%)

Query: 114 ASLGEEYITQYPESKNVDYV---YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
               +++   Y E  +  +     Y+ G  Y ++ +            +    RI +R+ 
Sbjct: 49  LECIDKFQKVYREDPSGPWASASLYMAGNLYIELHKR-SLKSSDKNEAIDIFERITKRFP 107

Query: 171 NSPYVKGARFYVT 183
           +S Y   AR  + 
Sbjct: 108 DSKYAARAREEIE 120



 Score = 38.9 bits (90), Expect = 0.75,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 24/60 (40%), Gaps = 7/60 (11%)

Query: 44  RDVYLDSVTDVRYQREVYEKA-------VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           + VY +  +       +Y             LK  + ++A + F + ++ FP +  A ++
Sbjct: 56  QKVYREDPSGPWASASLYMAGNLYIELHKRSLKSSDKNEAIDIFERITKRFPDSKYAARA 115


>gi|218439843|ref|YP_002378172.1| hypothetical protein PCC7424_2899 [Cyanothece sp. PCC 7424]
 gi|218172571|gb|ACK71304.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424]
          Length = 269

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 46/287 (16%), Positives = 79/287 (27%), Gaps = 75/287 (26%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQ----REVYEKAVLFLKEQNFSKAYEYFNQ 82
             S+    L+G     S    ++  T    Q      + +KA+      NF++A  Y++Q
Sbjct: 5   LISLITVVLIGCTALPSWAEPVNPPTLTEEQISQGEALAQKALEATDRGNFAEAEIYWSQ 64

Query: 83  CSRDFPFAG--VAR-------KSLLMSAFVQYS----------------------AGKYQ 111
               FP      +        +  L  A   +                        G+Y 
Sbjct: 65  LIEQFPTNPAVWSNRGNCRVSQYKLDEAIADFDKAIELAPHTPDPYLNRGTAFEAQGRYD 124

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            A       ++  PE       Y   G +   +           +  L    +  E   N
Sbjct: 125 AAIEDYNRVLSLDPEDP---MAYNNRGNAQGGL--------GNWEEALADYQKATEIAPN 173

Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM- 230
             + +            LA  E+         G    A  + + ++  Y        A+ 
Sbjct: 174 FAFAQ--------ANVALALYEM---------GNKEEATRKMRNLVRKYPMFPDMRAALT 216

Query: 231 ARLVEAYVALALMDEARE--VVSL-IQERYPQGYW----ARYVETLV 270
           A L E         EA    V ++ I  RY    W     R+   +V
Sbjct: 217 AVLWEQ----GKQGEAESNWVAAVGIDHRYQDLDWVQNIRRWPPQMV 259


>gi|21244100|ref|NP_643682.1| hypothetical protein XAC3375 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21109727|gb|AAM38218.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 601

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 38/111 (34%), Gaps = 9/111 (8%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           ++    +     VC L   +   + D  L    D   Q+ + +  V   ++ +F+ A + 
Sbjct: 324 FRRRAVVAVLAMVCVLPLAQPAHAADGTLWQRADQVQQQRL-DAGVQAYRKGDFAAAQKA 382

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           F              + L          G+Y  A +  +  + Q+P  ++ 
Sbjct: 383 FEAVP--------TDEGLYNLGNALARQGQYDAAIAAYDRALKQHPNQQDA 425


>gi|291279791|ref|YP_003496626.1| hypothetical protein DEFDS_1409 [Deferribacter desulfuricans SSM1]
 gi|290754493|dbj|BAI80870.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
          Length = 522

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 61/160 (38%), Gaps = 28/160 (17%)

Query: 19  LYKF--ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
           +++F   L +   I V F+         +    +V+D+ + R+   +   +++   +  A
Sbjct: 1   MFRFCSKLVVLIFILVSFVYA-------ENNNPNVSDILFARQSIAEGKYYVEVGKYLDA 53

Query: 77  YEYFN-QCS---RDFPFAGVARKSLLMSA--FVQYSAGKYQQAASLGEEYITQYPESKNV 130
            E+F          +  +     +LL  A  F  Y   K ++AA + EE   ++P+    
Sbjct: 54  LEFFETALETTNNRYIVSD----ALLQKATLFAHYMD-KPEEAAKIYEEIFRKFPDLPQG 108

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           +   Y + + Y     +        K  L+Y    ++ Y 
Sbjct: 109 ETALYKLALLYNDFGDE--------KKALEYFKLYLQYYP 140



 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 36/107 (33%), Gaps = 13/107 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             L++    +E  TN+ Y         +  + L  K      Y     +   A   ++ +
Sbjct: 52  DALEFFETALET-TNNRY---------IVSDALLQKATLFAHY---MDKPEEAAKIYEEI 98

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
              + D    E A+ +L   Y       +A E   L  + YP G + 
Sbjct: 99  FRKFPDLPQGETALYKLALLYNDFGDEKKALEYFKLYLQYYPFGRFR 145


>gi|256830988|ref|YP_003159716.1| hypothetical protein Dbac_3225 [Desulfomicrobium baculatum DSM
           4028]
 gi|256580164|gb|ACU91300.1| Tetratricopeptide domain protein [Desulfomicrobium baculatum DSM
           4028]
          Length = 1031

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 74/228 (32%), Gaps = 46/228 (20%)

Query: 58  REVYEKAVLFLKEQNFSKAYE--------------YFNQCSRDFPFAGVARK-SLLMSAF 102
            E+Y+ A   L  ++   A                 + +    +  A +  K  LL    
Sbjct: 388 EELYKTAQSALIVEDLKTARAAVTQMIEHPKLPEPLYEEL--LYTLADITMKEGLLDL-- 443

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
                G +       E       +S+NV      +G  Y  +                Y 
Sbjct: 444 ----EGNFASILEAYEAAKNSNLDSRNVPEALSRMG--YLHLFVG------NVPEAKGYF 491

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
             +  +Y +                ++A  +   G +YL+  +Y  A   FQ  + N+  
Sbjct: 492 DLLRRKYPDDR--------------RVAMIDYYWGEHYLRLKDYGRAAEHFQYAIQNFPM 537

Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
           +   + +   L+ A+  L   D+A  VVS I+ R+P  Y+      L+
Sbjct: 538 SLAVQPSTVGLLRAFTGLGYFDKALGVVSSIERRWP-SYYLSDPSFLM 584


>gi|242310653|ref|ZP_04809808.1| flagellar functional protein [Helicobacter pullorum MIT 98-5489]
 gi|239523051|gb|EEQ62917.1| flagellar functional protein [Helicobacter pullorum MIT 98-5489]
          Length = 788

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 75/196 (38%), Gaps = 26/196 (13%)

Query: 65  VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS---AGKYQQAASLGEEYI 121
              L+++++ +A    ++  +++P     R  L M      +      Y++  +LG+ ++
Sbjct: 179 QSLLEKKSYQEALNNIDEMLQNYPETIFKRDILFMKLKALQNLQNQEDYEEIMALGKAWL 238

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
             YP   +V  V  L+  +YA+M           +    Y  R+ + Y +  Y       
Sbjct: 239 NAYPADIHVPEVLLLMAENYAKM--------NFFEEASYYYDRLFKEYKDDKY------- 283

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
                  LA   +  G    KRG+   A+  +Q VL    D E A  A   L E Y    
Sbjct: 284 -----ELLAR--LSYGEKIFKRGDKKRALELYQSVLNQTQDLEIASLASLLLGEYYKDAG 336

Query: 242 LMDEAREVVS-LIQER 256
              +A++ +  ++   
Sbjct: 337 ESKQAQDYLKNILDAN 352



 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 18/122 (14%), Positives = 41/122 (33%), Gaps = 12/122 (9%)

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
           Y   I+ +  ++++ +  L  +  +++ Y  + + +   F        L  +E      Y
Sbjct: 174 YFLNIQSL-LEKKSYQEALNNIDEMLQNYPETIFKRDILFMKLKALQNLQNQED-----Y 227

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            +      A       L  Y    H  E +  + E Y  +   +EA      + + Y   
Sbjct: 228 EEIMALGKAW------LNAYPADIHVPEVLLLMAENYAKMNFFEEASYYYDRLFKEYKDD 281

Query: 261 YW 262
            +
Sbjct: 282 KY 283


>gi|163816722|ref|ZP_02208085.1| hypothetical protein COPEUT_02912 [Coprococcus eutactus ATCC 27759]
 gi|158447979|gb|EDP24974.1| hypothetical protein COPEUT_02912 [Coprococcus eutactus ATCC 27759]
          Length = 552

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 41/116 (35%), Gaps = 23/116 (19%)

Query: 89  FAGVARK-------SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
           +   A +       + + SA  +Y    Y+ A       +    ++ N D   Y  GM Y
Sbjct: 343 YGDYASQVLSDDNKARVQSAISKYENMSYEAAMDDLNRVLQ---DTPNSDVALYYKGMCY 399

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY-----VTVGRNQLAAK 192
            ++  +               +++VE   NS Y   A  +     +  G+++ A K
Sbjct: 400 LKLSDENN--------ATLVFNQLVENCPNSVYYAYACEHADDEAIQAGKDKAAQK 447



 Score = 43.6 bits (102), Expect = 0.033,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 7/95 (7%)

Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
           S Y   A     +  +  A  +  I +Y  +   Y AA+     VL    D  +++ A+ 
Sbjct: 341 SKYGDYASQ--VLSDDNKARVQSAISKY--ENMSYEAAMDDLNRVL---QDTPNSDVALY 393

Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
                Y+ L+  + A  V + + E  P   +  Y 
Sbjct: 394 YKGMCYLKLSDENNATLVFNQLVENCPNSVYYAYA 428


>gi|153006245|ref|YP_001380570.1| Tol-Pal system YbgF [Anaeromyxobacter sp. Fw109-5]
 gi|152029818|gb|ABS27586.1| Tol-Pal system YbgF [Anaeromyxobacter sp. Fw109-5]
          Length = 291

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 46/129 (35%), Gaps = 22/129 (17%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
            AG    A  L EEY+ ++P         Y  G        ++ +DQ+  +  L    ++
Sbjct: 167 EAGNKGVARELYEEYVRRWPADPRASDAGYRAG--------ELLFDQKRFREALLAYGKV 218

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
            E +  S     A   +    + +   E+       K     A +   + +L  Y  ++ 
Sbjct: 219 AEEFPKSARAPDA---MLGAADAMVKLEM-------KTEA-KAVL---EQLLERYPRSDA 264

Query: 226 AEEAMARLV 234
           A+ A  RL 
Sbjct: 265 AKTAKERLA 273



 Score = 43.2 bits (101), Expect = 0.040,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 38/111 (34%), Gaps = 14/111 (12%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
             +     V R+   P    A +                      +  +  A+  +  V 
Sbjct: 174 ARELYEEYVRRWPADPRASDAGYRAGELL--------------FDQKRFREALLAYGKVA 219

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
             +  +  A +AM    +A V L +  EA+ V+  + ERYP+   A+  + 
Sbjct: 220 EEFPKSARAPDAMLGAADAMVKLEMKTEAKAVLEQLLERYPRSDAAKTAKE 270



 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 45/110 (40%), Gaps = 4/110 (3%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLD----SVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
             FFS+A        +  +R++Y +       D R     Y    L   ++ F +A   +
Sbjct: 156 AAFFSLAKSEDEAGNKGVARELYEEYVRRWPADPRASDAGYRAGELLFDQKRFREALLAY 215

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
            + + +FP +  A  ++L +A          +A ++ E+ + +YP S   
Sbjct: 216 GKVAEEFPKSARAPDAMLGAADAMVKLEMKTEAKAVLEQLLERYPRSDAA 265



 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 50/155 (32%), Gaps = 8/155 (5%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
           A     G          L ++     +   +  A    +  N   A E + +  R +P  
Sbjct: 129 AALRGAGALEAFEAKQRLATLQRPDDKAAFFSLAKSEDEAGNKGVARELYEEYVRRWPAD 188

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
             A  +   +  + +   ++++A     +   ++P+S        ++G +      D   
Sbjct: 189 PRASDAGYRAGELLFDQKRFREALLAYGKVAEEFPKSARAPDA--MLGAA------DAMV 240

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
                      + +++ERY  S   K A+  +   
Sbjct: 241 KLEMKTEAKAVLEQLLERYPRSDAAKTAKERLAAL 275


>gi|254521184|ref|ZP_05133239.1| TPR domain protein [Stenotrophomonas sp. SKA14]
 gi|219718775|gb|EED37300.1| TPR domain protein [Stenotrophomonas sp. SKA14]
          Length = 611

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/65 (15%), Positives = 20/65 (30%), Gaps = 8/65 (12%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            + V   +  +F+ A + F     D              A      G Y +A +  +  +
Sbjct: 380 AEGVQAYRNGDFAGARKQFEGIDSDA--GWY------NLANALARQGNYDEAIAAYDRAL 431

Query: 122 TQYPE 126
             +P 
Sbjct: 432 ALHPG 436


>gi|118357165|ref|XP_001011832.1| DNA polymerase family B containing protein [Tetrahymena thermophila]
 gi|89293599|gb|EAR91587.1| DNA polymerase family B containing protein [Tetrahymena thermophila
            SB210]
          Length = 2315

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 73/237 (30%), Gaps = 54/237 (22%)

Query: 52   TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
             +    + + +K  L+LK+    +A   F    + +P       S  +  F  Y  GK+Q
Sbjct: 1784 ENTESYQYLVDKGRLYLKQGKLEEAQNLFQLALKYYPKTDY--LSHHLLGFTFYQQGKFQ 1841

Query: 112  QAASLGEEYITQYPESKNV--------------DYV--YYLVGM----SYA----QMIRD 147
             A     E +   P   ++              D     Y   +    SY      +   
Sbjct: 1842 DALQKFNESLQINPLQVDIYNTIGSIYDQQNMKDQAIKQYQKALEIQPSYYTALLNLGNL 1901

Query: 148  VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
              +D+   K   +   + ++   NS         + V +            +Y       
Sbjct: 1902 YFWDKNMVKEANECFQKALDINPNS---------LQVLKR--------AALFYYSN---- 1940

Query: 208  AAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
                +FQ  + NY  A        E    L + Y  +  + +A +++    ++ P+ 
Sbjct: 1941 ---NQFQEAIQNYEKALSIDPQDYEIFGCLAQVYHQIGNIQKAIKILEKAIKQNPRN 1994



 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 64/194 (32%), Gaps = 34/194 (17%)

Query: 62   EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
              A+L     N  ++   F +  +  P       +L    F+ Y  G Y +A S  ++ I
Sbjct: 2136 NIALLHFMNGNTEESKICFEKTLKIKPDHSY---ALTNLGFIYYLQGDYSKAISFYQQSI 2192

Query: 122  TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                   ++ + +  +G+ Y          Q   +   Q   + ++   N          
Sbjct: 2193 EI---DPSMHHGFNNLGLIYQH--------QGLAEQAKQQYEKALQILPN---------- 2231

Query: 182  VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
                 N L       G  Y K G+   AI  ++             +++  +   Y  + 
Sbjct: 2232 FAQALNNL-------GSIYYKNGKIEDAIEYYKKAQQVDPQFLEPYKSLGYI---YQKIG 2281

Query: 242  LMDEAREVVSLIQE 255
            ++ EA+ ++  + +
Sbjct: 2282 MVVEAKNMLDQLTQ 2295


>gi|161485632|ref|YP_720352.2| 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Trichodesmium
           erythraeum IMS101]
          Length = 541

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/134 (8%), Positives = 40/134 (29%), Gaps = 20/134 (14%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSL 97
           ++  +++     +     + Y++ +   ++Q++  A   F++                + 
Sbjct: 402 ENPTEIFTKIENEQIEFNDFYQRGLAKYEQQDYQSALAEFDRAIDIDSSH------IDAY 455

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
           +     +     Y+ A +   E I            YY           +V      ++ 
Sbjct: 456 IYRGDAKDKLEDYEGAIADYNEAIKIDSSHPK---AYYSR--------ENVLRKAGDSRE 504

Query: 158 MLQYMSRIVERYTN 171
            +    + ++   N
Sbjct: 505 AIADYDQAIKLDPN 518


>gi|319940887|ref|ZP_08015226.1| hypothetical protein HMPREF9464_00445 [Sutterella wadsworthensis
           3_1_45B]
 gi|319805769|gb|EFW02550.1| hypothetical protein HMPREF9464_00445 [Sutterella wadsworthensis
           3_1_45B]
          Length = 248

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 47/135 (34%), Gaps = 8/135 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S+     +++ Y+ AV  L+   +  A + F   + +F  +     +L       ++   
Sbjct: 117 SIEVSAEEKKAYDTAVALLQTGKYGDAEKAFKDFNDNFKKSPYRMDALFWWGTSAFANEH 176

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y+ A S   + + ++ +         LV  S A           +       + +I++ Y
Sbjct: 177 YKTAISSQNQLLREFSKGARAADAMMLVASSQAAS--------GSINAAKATLQKIIKTY 228

Query: 170 TNSPYVKGARFYVTV 184
             +   K A   +  
Sbjct: 229 PKTDVAKEAAQRIRE 243


>gi|218438344|ref|YP_002376673.1| hypothetical protein PCC7424_1361 [Cyanothece sp. PCC 7424]
 gi|218171072|gb|ACK69805.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424]
          Length = 1276

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 60/210 (28%), Gaps = 46/210 (21%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y + V   K + + +A + ++Q  +  P    A  +            +YQ+A    ++ 
Sbjct: 464 YNQGVALGKLERYQEALQSYDQAIKLNP--NYAE-AWYNQGVALGKLERYQEALQSYDQA 520

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           I   P   N    +Y  G +   +           +   Q   + ++   N         
Sbjct: 521 IKLNP---NYAEAWYNRGFALGNL--------ECYQEAFQSFDKAIQLNPNDAEAW--NN 567

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY----SDAEHAEEAMARLVEA 236
                RN                      + R+Q  L +Y        +  EA+     A
Sbjct: 568 RGFSLRN----------------------LERYQEALQSYDKAIQLNPNYAEALFNRGVA 605

Query: 237 YVALALMDEA-REVVSLIQERYPQGY--WA 263
              L   +EA +     IQ   P     W 
Sbjct: 606 LERLERYEEAFQSFDKAIQLN-PNNTEAWY 634



 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 59/165 (35%), Gaps = 21/165 (12%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           Y    Y +       + + +A++ F++  +  P    A        F   +  +YQ+A  
Sbjct: 527 YAEAWYNRGFALGNLECYQEAFQSFDKAIQLNPNDAEAWN---NRGFSLRNLERYQEALQ 583

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
             ++ I   P   N     +  G++  ++ R         +   Q   + ++   N+   
Sbjct: 584 SYDKAIQLNP---NYAEALFNRGVALERLER--------YEEAFQSFDKAIQLNPNN--- 629

Query: 176 KGARFYVTVGRNQLAAKEVEIGRY----YLKRGEYVAAIPRFQLV 216
             A +   V   +L   +  I  Y     +KR  Y+A I R  L+
Sbjct: 630 TEAWYNRGVVLGKLERHQEAIASYDQALVIKRDFYLAWINRGNLI 674



 Score = 40.5 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 72/212 (33%), Gaps = 28/212 (13%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           + V  L    + +A   F++     P    A  +L    FV     +YQ+A    ++ + 
Sbjct: 92  RGVALLHLGKYEEALSTFDKALELNP--NYAE-ALSNRGFVLGKLERYQEALPTFDKALE 148

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP----YVKGA 178
             P   N     +  G++  ++ R         +   Q   + +E   N+     Y   A
Sbjct: 149 LNP---NYAEALFNRGVALERLER--------YQEAFQSYDKALELNPNNAVAWNYRGVA 197

Query: 179 RFYVTVGRNQLA--AKEVEI----GRYYLKRGEYVAAIPRFQLVLANYSDA----EHAEE 228
              +   +  L    K +E+       +  RG  +  + R+Q  L +Y  A     +  E
Sbjct: 198 LGKLERYQEALPTFDKALELNPNNAEVWFNRGVALVNLERYQEALQSYEKALKLNPNYGE 257

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           A      A  +L    EA E     +E  P  
Sbjct: 258 AWNYRGVALESLERYQEALEAFDKARELNPNN 289



 Score = 35.5 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 45/121 (37%), Gaps = 16/121 (13%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           Y    Y + V     + + +A+++++Q  +  P      ++         +  +Y++A  
Sbjct: 391 YAEAWYNQGVALGMLERYEEAFQFYDQAIKLNPNHA---QAWNNRGVALGNLERYEEAFQ 447

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
             ++ I   P        +Y  G++  ++ R         +  LQ   + ++   N  Y 
Sbjct: 448 SFDKAIKLNPNH---AEAWYNQGVALGKLER--------YQEALQSYDQAIKLNPN--YA 494

Query: 176 K 176
           +
Sbjct: 495 E 495


>gi|302342825|ref|YP_003807354.1| response regulator receiver protein [Desulfarculus baarsii DSM
           2075]
 gi|301639438|gb|ADK84760.1| response regulator receiver protein [Desulfarculus baarsii DSM
           2075]
          Length = 349

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/215 (13%), Positives = 78/215 (36%), Gaps = 30/215 (13%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
                 + +Y K +  ++E+ + +A E F +    +            SA + Y+ G   
Sbjct: 137 PQAFEAQRLYAKGLQLMEEKRWEEALESFRRILGIY-----------ESAEIYYNMGYIS 185

Query: 112 QAASLGEEYITQY-----------PESKNVDYVYYLVG---MS--YAQMIRDVPYDQRAT 155
            A    EE I  +              + +   Y  +    ++  + ++  D+  ++R  
Sbjct: 186 TARGSYEEAIHYFRKATQINNAFAQAHEKMGECYRQLARPKLAQKHFELAADIYMERRMD 245

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
               Q +++++E   N+  V  +   + +   +    E+ I +Y         A+     
Sbjct: 246 SNAEQVLNQVLELNPNTINVYNS---LGILYRRQGRYELAIKQYKKALKVNPEAVNIHYN 302

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
           +   Y + +  + A+  L +A        +A++++
Sbjct: 303 LARIYYETKDYQRALILLEQALKINPDFADAQDML 337


>gi|224043184|ref|XP_002188826.1| PREDICTED: intraflagellar transport 88 homolog (Chlamydomonas)
           isoform 1 [Taeniopygia guttata]
          Length = 823

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 37/283 (13%), Positives = 79/283 (27%), Gaps = 56/283 (19%)

Query: 6   GRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAV 65
              + +FE    ++   A T    +   +L     Q++    L   +D      +  K  
Sbjct: 436 LETLKMFEKKDSRVKSAAATNLSFLY--YLGNELEQATNYADLAVNSDRYNPAALTNKGN 493

Query: 66  LFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
                 +  KA E++      D     +  ++L           +  +A      ++  +
Sbjct: 494 TIFANGDCEKAAEFYKEALRND----SLCTEALYNLGLAYKKLNRIDEALDC---FLKLH 546

Query: 125 PESKNVDYVYYLVGMSY-------------AQMIRDVPYDQ-------------RATKLM 158
               N   V Y +   Y              Q+I  VP D                    
Sbjct: 547 AILPNSAQVLYQLASIYQIMEDPNQAIEWLLQLISVVPTDPHVLSKLGNLYDTEGDKSQA 606

Query: 159 LQYMSRIVERYT--------------NSPYVKGARFYVTVGRNQL---AAKEVEIGRYYL 201
             Y       +               ++ + + A  Y       L      ++ +   Y 
Sbjct: 607 FHYYCESYRYFPSNIEVIEWLGAYYIDTQFCEKAIEYFERAALILPTQVKWQLMVASCYR 666

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
           + G Y  A+ +++++   + D     E +  LV     + L +
Sbjct: 667 RSGNYQKALEKYKVIHRKFPD---NVECLRFLVRLCTDMGLKE 706


>gi|149922306|ref|ZP_01910742.1| hypothetical protein PPSIR1_18567 [Plesiocystis pacifica SIR-1]
 gi|149816850|gb|EDM76338.1| hypothetical protein PPSIR1_18567 [Plesiocystis pacifica SIR-1]
          Length = 384

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/142 (14%), Positives = 44/142 (30%), Gaps = 15/142 (10%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
            S   V        +   E+ + A      ++F+ A   + +  R +P +  AR + +  
Sbjct: 253 SSDPSVAKAKPKSSKSADELLDLARSQRTAKDFAAAAATYEELVRSYPSSAKARSAHVSV 312

Query: 101 AFVQYS-AGKYQQAASLGEEYITQYPESKNVDYVYY--LVGMSYAQMIRDVPYDQRATKL 157
           A +         +A    + Y+ +       +  +Y  +  +            Q  T  
Sbjct: 313 AQLYLGPLDNPSKAIRHFDRYLKR--GGPLAEEAHYGKIRAL----------RKQGQTAK 360

Query: 158 MLQYMSRIVERYTNSPYVKGAR 179
                +  ++ Y  S Y    R
Sbjct: 361 AKTEAAAFLDDYPQSAYADAVR 382


>gi|294508106|ref|YP_003572164.1| Conserved hypothetical protein containing tetratricopeptide repeat
           domain [Salinibacter ruber M8]
 gi|294344434|emb|CBH25212.1| Conserved hypothetical protein containing tetratricopeptide repeat
           domain [Salinibacter ruber M8]
          Length = 594

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 40/100 (40%), Gaps = 1/100 (1%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
              F   +   +G    S+     ++++++     ++E+ V   +   ++ A+E F +  
Sbjct: 39  VCVFGFLLLLSIGMPGTSAHAQQAEAISEIENAELLFEEGVAAFERGEYATAHERF-RLV 97

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
            ++        +LLM        G+Y+ A    E  + QY
Sbjct: 98  SEYALNRKTTAALLMDGKALVQLGRYRDAIGRLEALLNQY 137


>gi|257061460|ref|YP_003139348.1| lytic transglycosylase catalytic [Cyanothece sp. PCC 8802]
 gi|256591626|gb|ACV02513.1| Lytic transglycosylase catalytic [Cyanothece sp. PCC 8802]
          Length = 730

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 73/212 (34%), Gaps = 31/212 (14%)

Query: 55  RYQREVYE--KAVLFLKEQNFSKAYEY-FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
              + +Y   +        N     +  + +    FP A  A  +L   A       + +
Sbjct: 262 STAQNLYRIGRGQQLQPNGNNKATVQAAYQKLLVAFPQAPEAALALQRLA----QLSQPE 317

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            A S  ++ I ++P  +   Y          +++  +     ATK        ++ +Y  
Sbjct: 318 TAISYLDQLINKFP--EQAGYALVKKA----ELLDKLNRQGEATK----IRQTLLSKYAK 367

Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
           S              +  A     I +   +RG+ + A    Q ++ N  ++  A +A  
Sbjct: 368 S--------------DATAEYRWLIAQKAAERGDALKAWTWAQPIVVNNPESPLAPKAGF 413

Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
            + +    L  ++EA      +  R+PQ Y+A
Sbjct: 414 WVGKWAQQLGRLEEAETAFEYVVTRHPQSYYA 445


>gi|255654121|ref|ZP_05399530.1| TPR repeats containing protein [Clostridium difficile QCD-23m63]
 gi|296449840|ref|ZP_06891607.1| TPR repeats containing protein [Clostridium difficile NAP08]
 gi|296877904|ref|ZP_06901924.1| TPR repeats containing protein [Clostridium difficile NAP07]
 gi|296261327|gb|EFH08155.1| TPR repeats containing protein [Clostridium difficile NAP08]
 gi|296431101|gb|EFH16928.1| TPR repeats containing protein [Clostridium difficile NAP07]
          Length = 483

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/93 (12%), Positives = 33/93 (35%), Gaps = 15/93 (16%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           +       ++  A +     N+++A + ++     +P      K+    A   Y   +YQ
Sbjct: 100 SKKPSPDAIFLSARIEYLNGNYTQAEKLYDNLIEQYP-DKFKSKAEDELALTYYQTNQYQ 158

Query: 112 QA------------ASLGEEYITQYPESKNVDY 132
           +A              + + +  ++P    +D+
Sbjct: 159 KADKLSSVKTNNALLEMMKAFKDKHPN--KIDW 189


>gi|254423059|ref|ZP_05036777.1| Transglycosylase SLT domain protein [Synechococcus sp. PCC 7335]
 gi|196190548|gb|EDX85512.1| Transglycosylase SLT domain protein [Synechococcus sp. PCC 7335]
          Length = 771

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 51/162 (31%), Gaps = 19/162 (11%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
           ++ +  L   ER     V  +    +   R  Y  A   + +Q   +A        + + 
Sbjct: 56  ALNLALLQPAERAVDLSVMANGTAGIDRDRARYMLATDLINQQQADQALPLLRNLEKSY- 114

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI--R 146
              +A   LL  A  Q +    + A +     I +YPES       YL+G      +   
Sbjct: 115 -QVLAPYVLLRQAQAQAATRDQESAIATWTRLIKKYPESTATAEALYLLGQPSIDQVSAN 173

Query: 147 DVPYDQRATKLMLQ---------------YMSRIVERYTNSP 173
               +Q +T                    Y + ++ +Y   P
Sbjct: 174 QASANQTSTSQASANQTNDSQPATSPSSTYWNTLITQYPAHP 215



 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 69/237 (29%), Gaps = 32/237 (13%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
           A      WE Q+  +         R    +Y  A    +     +A   +    + FP  
Sbjct: 284 AAIGFGYWETQNYAEAGDAYAKAPRTPLNLYRAARGKERGDKDKEAIVLYQMLDKAFPAE 343

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGE----EYITQYPESKNVDYVYYLVGMSYAQMIR 146
                 LL  A       K Q A +  +     +   +P+                    
Sbjct: 344 PETADGLLNLA----GLQKGQSALATLDEVVGRFSNSFPD----------KAAEAIADRA 389

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
            +     + ++  Q    I+  Y+ S     A+  +   +               K    
Sbjct: 390 TLLESLGSAEVAKQAQDSILSEYSGSK--AAAQIRLKRAKEN------------AKANNL 435

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
             AI   Q ++      E A EA   L + +     +D+AR+    +   +P+ Y+A
Sbjct: 436 TGAISWAQQLVDAAPSGERAAEAGFWLGKWHSQQDQVDQARKAFENVIVNHPESYYA 492


>gi|321263865|ref|XP_003196650.1| general transcriptional repressor [Cryptococcus gattii WM276]
 gi|317463127|gb|ADV24863.1| General transcriptional repressor, putative [Cryptococcus gattii
           WM276]
          Length = 1105

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 46/139 (33%), Gaps = 22/139 (15%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108
           TD    +  Y     ++  Q ++KAYE + Q        P              + Y   
Sbjct: 369 TDPSDAQSWYLLGRAYMAAQRYNKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIA 422

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +Y+ A       I   P    +  V+Y +G S  +   +   D       L   SR +E 
Sbjct: 423 QYRDALDAYSRAIRLNP---YISEVWYNLG-SLYESCNNQMAD------ALDAYSRALEL 472

Query: 169 YTNSPYVKGARFYVTVGRN 187
             N+      +  + + +N
Sbjct: 473 DPNN---TVIKQRMALLQN 488


>gi|296481738|gb|DAA23853.1| intraflagellar transport 88 homolog [Bos taurus]
          Length = 825

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 75/259 (28%), Gaps = 55/259 (21%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLM 99
           Q+S    L   +D      +  K        ++ KA E++      D         +L  
Sbjct: 469 QASSYADLAVNSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDCSCTE----ALYN 524

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY-------------AQMIR 146
                    +  +A      ++  +   +N   V Y +   Y              Q+I 
Sbjct: 525 IGLTYKKLNRLDEALDC---FLKLHAILRNSAQVLYQIANVYELMEDPSQAMEWLMQLIS 581

Query: 147 DVPYDQRATKL-------------MLQYMSRIVERYT--------------NSPYVKGAR 179
            VP D RA                  QY       +               ++ + + A 
Sbjct: 582 VVPTDSRALSKLGGLYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAI 641

Query: 180 FYVT---VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
            Y     + +      ++ +   + + G Y  A+  ++ +   + +     E +  LV  
Sbjct: 642 QYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRKFPE---NVECLRFLVRL 698

Query: 237 YVALALMDEAREVVSLIQE 255
              + L  E +E  + ++ 
Sbjct: 699 CTDIGLK-EVQEYATKLKR 716


>gi|206889631|ref|YP_002249532.1| tetratricopeptide repeat domain protein [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206741569|gb|ACI20626.1| tetratricopeptide repeat domain protein [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 708

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 3/67 (4%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A +      F +A E   + S+  PF     +     A +      Y +A    E Y+  
Sbjct: 627 AEVLFTNNKFEEAAEELEKVSQLQPFNP---QIYFNRAIIYEKISDYAKAIENMEVYLQL 683

Query: 124 YPESKNV 130
            P + N 
Sbjct: 684 NPNAPNA 690



 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 30/78 (38%), Gaps = 6/78 (7%)

Query: 67  FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
           +L ++ +  A     Q     P + +    L+    +     KY++A    + YI Q P+
Sbjct: 263 YLAQRKYKDAIAQLEQAVSLAPKSAI---LLIKLHDIYIERSKYEKAIEAVKRYIEQRPD 319

Query: 127 SKNVDYVYYLVGMSYAQM 144
                Y    + + Y ++
Sbjct: 320 DH---YAPLRLALLYFKL 334



 Score = 35.5 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 42/140 (30%), Gaps = 31/140 (22%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
                 +A +  + ++   P+  N              ++      QR  K  +  + + 
Sbjct: 231 KNNDIPEALAASQMHVQLAPKDPN-----------GYLLLYKCYLAQRKYKDAIAQLEQA 279

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           V     S         + + +             Y++R +Y  AI   +  +    D  +
Sbjct: 280 VSLAPKSA--------ILLIKLH---------DIYIERSKYEKAIEAVKRYIEQRPDDHY 322

Query: 226 AEEAMARLVEAYVALALMDE 245
           A   +A L   Y  L   DE
Sbjct: 323 APLRLALL---YFKLGKYDE 339


>gi|158334744|ref|YP_001515916.1| TPR repeat-containing serine/threonine protein kinase
           [Acaryochloris marina MBIC11017]
 gi|158304985|gb|ABW26602.1| serine/threonin protein kinase with TRP repeats [Acaryochloris
           marina MBIC11017]
          Length = 670

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 38/257 (14%), Positives = 82/257 (31%), Gaps = 41/257 (15%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
            A     S++    +   R SS +   +S T          +       +N+  A   ++
Sbjct: 313 IAFLTLGSLSGITYMIATRMSSSETSGESATAFI------RRGDAKYNRRNYEDAIADYS 366

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
           +  R    +    ++ L     +Y+  +Y +A    +E +   P     DYVY       
Sbjct: 367 EAIRL---SPDNAQAYLGRGNARYALEEYPEALIDYDEALKHDP-----DYVY------A 412

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY-- 199
                +V + ++  +  +Q  ++ ++          A +     ++ L      I  +  
Sbjct: 413 FNGRGNVKFARKDFEGAIQDYNQAIQSDPQ---FALAFYNRGNVKSALKEHRAAIEDFSQ 469

Query: 200 -----------YLKRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMD 244
                      YL RG   AA+  +   + +YS+        + A      A   L    
Sbjct: 470 AIRLNPQYEPAYLLRGVSKAALTNYAGAIEDYSETIRLNPDNDNAFNSRGVARYKLGESR 529

Query: 245 EA-REVVSLIQERYPQG 260
           +A ++    I+      
Sbjct: 530 QAIKDFTEAIRLNPKNS 546



 Score = 40.5 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 60/191 (31%), Gaps = 32/191 (16%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           +D      +D ++    Y +  +    +    A E F+Q  R  P       + L+    
Sbjct: 431 QDYNQAIQSDPQFALAFYNRGNVKSALKEHRAAIEDFSQAIRLNP--QY-EPAYLLRGVS 487

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           + +   Y  A     E I   P++ N    +   G++  ++          ++  ++  +
Sbjct: 488 KAALTNYAGAIEDYSETIRLNPDNDN---AFNSRGVARYKL--------GESRQAIKDFT 536

Query: 164 RIVERYTNSPYV-----------KGARFYVTVGRNQL---AAKEVEIGRYYLKRGEYVAA 209
             +     + +            K A   +      +             Y  RG+   A
Sbjct: 537 EAIRLNPKNSFAYCNRGESKLKLKDAEGAIKDCTETIRLDPQSSFA----YSARGKAHHA 592

Query: 210 IPRFQLVLANY 220
           + R++  + +Y
Sbjct: 593 LKRYKAAIEDY 603



 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 52/186 (27%), Gaps = 37/186 (19%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           + +     +Y+   Y+ A +   E I     S +    Y   G +   +           
Sbjct: 344 AFIRRGDAKYNRRNYEDAIADYSEAIRL---SPDNAQAYLGRGNARYALEEYP------- 393

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY-------------YLK 202
              L      ++   +  Y    R  V   R      E  I  Y             +  
Sbjct: 394 -EALIDYDEALKHDPDYVYAFNGRGNVKFARKDF---EGAIQDYNQAIQSDPQFALAFYN 449

Query: 203 RGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEA---REVVSLIQE 255
           RG   +A+   +  + ++S A       E A   L+      AL + A    +    I+ 
Sbjct: 450 RGNVKSALKEHRAAIEDFSQAIRLNPQYEPA--YLLRGVSKAALTNYAGAIEDYSETIRL 507

Query: 256 RYPQGY 261
             P   
Sbjct: 508 N-PDND 512


>gi|242793584|ref|XP_002482194.1| serine/threonine protein phosphatase PPT1 [Talaromyces stipitatus
           ATCC 10500]
 gi|218718782|gb|EED18202.1| serine/threonine protein phosphatase PPT1 [Talaromyces stipitatus
           ATCC 10500]
          Length = 943

 Score = 46.3 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/156 (11%), Positives = 51/156 (32%), Gaps = 29/156 (18%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF---PFAGVARKSLLMSAFVQYS 106
           SV +     ++  K      + ++  A +++ Q    +   P +  + ++          
Sbjct: 4   SVPEAANALKL--KGNAAFAKHDWPTAIDFYTQAIDQYDKEP-SFFSNRAQ-----AHIK 55

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
              Y  A +   + +   P +      Y+   ++   ++          +  L+    ++
Sbjct: 56  MEAYGYAIADATKALELDPTNVK---AYWRRALANTAILN--------PRAALKDYKSVI 104

Query: 167 ERYTNSPYVKGARFYVTVG----RNQLAAKEVEIGR 198
           +R  N+     A+  +T      R     K +E+  
Sbjct: 105 KREPNNQ---TAKLRLTECEKLVRRMDFEKAIEVAE 137


>gi|755486|gb|AAA86720.1| mutations in the mouse Tg737 gene cause polycystic kidney disease
           [Homo sapiens]
          Length = 824

 Score = 46.3 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/299 (11%), Positives = 88/299 (29%), Gaps = 56/299 (18%)

Query: 2   SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60
                +A+ I +    +  +       +++  + +G +  Q+S    +   +D      +
Sbjct: 428 QKDYNQAVEILKVLEKKDNRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 487

Query: 61  YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
             K        ++ KA E++      D   +     +L           +  +A      
Sbjct: 488 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 540

Query: 120 YITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKL--------- 157
           ++  +   +N   V Y +   Y              Q++  +P D +             
Sbjct: 541 FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREG 600

Query: 158 ----MLQYMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEI 196
                 QY       +               ++ + + A  Y     + +      ++ +
Sbjct: 601 DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMV 660

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
              + + G Y  A+  ++     + +     E +  LV     L L D A+E    ++ 
Sbjct: 661 ASCFRRSGNYQKALDTYKDTHRKFPE---NVECLRFLVRLCTDLGLKD-AQEYARKLKR 715



 Score = 36.2 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 76/261 (29%), Gaps = 69/261 (26%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           A  I   I   F  G +      V      ++    E+  KAV +L+++++++A E    
Sbjct: 383 AKLIAPVIETSFAAGCDWCV-EVVKASQYVELANDLEI-NKAVTYLRQKDYNQAVEILKV 440

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG------EEYITQYP---ESK----- 128
             +      V   +    + + Y    + QA+S        + Y    P    +K     
Sbjct: 441 LEKKD--NRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRY---NPAALTNKGNTVF 495

Query: 129 -NVDY-------------------VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
            N DY                     Y +G++Y ++ R            L    ++   
Sbjct: 496 ANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNR--------LDEALDCFLKLHAI 547

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
             NS                 A    +I   Y        AI     V++          
Sbjct: 548 LRNS-----------------AEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQV-- 588

Query: 229 AMARLVEAYVALALMDEAREV 249
            +++L E Y       +A + 
Sbjct: 589 -LSKLGELYDREGDKSQAFQY 608


>gi|282899388|ref|ZP_06307356.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
 gi|281195755|gb|EFA70684.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
          Length = 508

 Score = 46.3 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 68/189 (35%), Gaps = 35/189 (18%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              ++ +V  + +   +  R+ Y + +  L + N+ ++ + F+Q  +  P    A  +  
Sbjct: 269 NTTATGEVPQERLNSPQSARDFYARGITKLDQLNYKESLDDFDQAIKIDP--KYAE-AYF 325

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY-YL-VGMSYAQMIRDVPYDQRATK 156
              +      +Y++A     + I   P      YV  YL  G +Y  +  D        +
Sbjct: 326 KRGYALSWLRRYEEALLDFNQVIALDPN-----YVDGYLNRGWTYIWLQND--------Q 372

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             L+  +R +    +  Y       +      +A         Y+K G+Y AA+   +  
Sbjct: 373 AALEDFNRAIRLNPS--YS------IAYAHQGMA---------YIKLGKYQAALESSKQA 415

Query: 217 LANYSDAEH 225
           +    +  +
Sbjct: 416 IRLDPNNSY 424


>gi|39997085|ref|NP_953036.1| TPR domain protein [Geobacter sulfurreducens PCA]
 gi|39983975|gb|AAR35363.1| TPR domain protein [Geobacter sulfurreducens PCA]
          Length = 864

 Score = 46.3 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 75/230 (32%), Gaps = 44/230 (19%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D  +Q   Y+ A  +     + +A + + +  +  P        +L  A +  S  K  Q
Sbjct: 23  DQNFQDARYQLAKAYQALGKYEQAEKEYLKVLKQNPS---KTDIVLELAKLYNSQRKPDQ 79

Query: 113 AASLGEEYITQYPESKNV------DYVYYLVGM---SYAQMIRDVPYDQRATKLMLQYMS 163
           A     +Y+   P S          Y   L GM   +    +  +  + R T   LQ   
Sbjct: 80  AVEQAGKYLQSNPGSAEALEVLGLGYA--LKGMPAEAERNFLLALEKEPRRTSAKLQLAV 137

Query: 164 RIVERYTNSPYVKGARFYVTVG----------RNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
            ++E+   S   K AR  +              N LA+ E+ +G              R 
Sbjct: 138 LLMEQ--KSSREKEARALIDEILTADPGNVKAHNLLASYELSLG-------------NR- 181

Query: 214 QLVLANYSD----AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           +  L  Y             + R     +    MD+A +    + +++PQ
Sbjct: 182 EQALEIYRKVAALTPGDPAPLYRQGVILLEKGEMDKAEKTAETLVQKFPQ 231



 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 59/189 (31%), Gaps = 35/189 (18%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
              +Y + V+ L++    KA +      + FP    +  + L      Y    Y  A + 
Sbjct: 199 PAPLYRQGVILLEKGEMDKAEKTAETLVQKFP--QKSEGARLKGLIA-YQRKNYADAITA 255

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            +  +   P  +      Y +G+S               +  L    RI++   +     
Sbjct: 256 LQTSVKIAPSLEG----LYYLGLSMYSR--------GELENALSQFRRILDHTPDF---- 299

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
             +  +      L  K         +  + +A   R    +    D+  A  A   L  A
Sbjct: 300 -VQARLLTALILLNQK---------RVDDAIAEANRA---IET--DSRSAL-ARNILGSA 343

Query: 237 YVALALMDE 245
           Y+A  + DE
Sbjct: 344 YLAKGMYDE 352


>gi|226532194|ref|NP_001148950.1| peptidyl-prolyl isomerase PASTICCINO1 [Zea mays]
 gi|195623564|gb|ACG33612.1| peptidyl-prolyl isomerase PASTICCINO1 [Zea mays]
          Length = 631

 Score = 46.3 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 47/152 (30%), Gaps = 27/152 (17%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF----P--------FAGVARKSL-LMSA 101
               ++        KE  F  A   +++  R++    P        FA  +R SL L  A
Sbjct: 402 DEADKIKNTGNRLFKEGKFELAKAKYDKVLREYNHVHPHDDEEGKIFAN-SRSSLHLNVA 460

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           F     G+Y+++     + +   P         Y  G S+  +                 
Sbjct: 461 FCYQKMGEYRKSIETCNKVLDANPVHVK---ALYRRGTSFMLL--------GDFNDARND 509

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
             +++    +S   + A   +   + +    E
Sbjct: 510 FEKMITIDKSSE--QDATAALLKLKQKEQEAE 539


>gi|15606474|ref|NP_213854.1| hypothetical protein aq_1247 [Aquifex aeolicus VF5]
 gi|2983687|gb|AAC07252.1| putative protein [Aquifex aeolicus VF5]
          Length = 217

 Score = 46.3 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 52/148 (35%), Gaps = 29/148 (19%)

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
            K+   +A   Y   +  +A     E+I +YP SK  D  Y+ +G ++ ++         
Sbjct: 91  EKAEYENALELYKMKQLNEARDAFVEFIKKYPNSKYTDNAYFWLGKTFYEL--------G 142

Query: 154 ATKLMLQYMSRIVER-----YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
            T+   Q  + ++++       +   +    F +      L    +E             
Sbjct: 143 NTERAKQIFNVLIKKCKSGELPDCNKLPDTYFMLVKI--SLDEGNIEEA----------- 189

Query: 209 AIPRFQLVL-ANYSDAEHAEEAMARLVE 235
              R+  +L   + DAE  + A   + +
Sbjct: 190 --NRYLSILEEKFPDAEATQRAKELIYK 215



 Score = 43.6 bits (102), Expect = 0.027,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 44/119 (36%), Gaps = 19/119 (15%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                    +++Y NS Y   A F++              G+ + + G    A   F ++
Sbjct: 109 EARDAFVEFIKKYPNSKYTDNAYFWL--------------GKTFYELGNTERAKQIFNVL 154

Query: 217 LAN-----YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
           +         D     +    LV+  +    ++EA   +S+++E++P     +  + L+
Sbjct: 155 IKKCKSGELPDCNKLPDTYFMLVKISLDEGNIEEANRYLSILEEKFPDAEATQRAKELI 213



 Score = 35.5 bits (81), Expect = 9.3,   Method: Composition-based stats.
 Identities = 9/64 (14%), Positives = 27/64 (42%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            K  +   A   F   +  Y ++++ + A   L + +  L   + A+++ +++ ++   G
Sbjct: 102 YKMKQLNEARDAFVEFIKKYPNSKYTDNAYFWLGKTFYELGNTERAKQIFNVLIKKCKSG 161

Query: 261 YWAR 264
               
Sbjct: 162 ELPD 165


>gi|298491870|ref|YP_003722047.1| TPR repeat-containing protein ['Nostoc azollae' 0708]
 gi|298233788|gb|ADI64924.1| TPR repeat-containing protein ['Nostoc azollae' 0708]
          Length = 227

 Score = 46.3 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 82/253 (32%), Gaps = 42/253 (16%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
            Y+   F +T+    ++          +    L +    +  +E+ E+    +   +++ 
Sbjct: 1   MYKQTSFLVTVLLLGSLVTTTPLVAVGAE--VLVAQASNQRLKELLEEGRRLVDAGDYNG 58

Query: 76  AYEYFNQCSRDFPFAGVARKSLLM--SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
           A   + +  +  P     R + +     ++      +Q A +     IT  P + +  Y 
Sbjct: 59  AIAVYQEAGKLDP-----RNAKIYSGIGYLYAQQSNFQLALAAYGRAITIDPNNSDFYYA 113

Query: 134 Y-YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
             Y+ G +              T    +   R ++   N+     A   + V +  L   
Sbjct: 114 VGYIKGNT------------GDTPGAKEAYRRAIQLNRNN---VNAYLGLGVTQTTLGDY 158

Query: 193 EVEIGRYYLKRGEYVAAIP-------RFQLVLANYSDAEHAEEAMARLVEA---YVALAL 242
           E            Y  AI         ++L+ + +      +EA   L +A   Y +   
Sbjct: 159 ESA-------MWAYEQAINLNRNNPRTYELMGSMFKQRRQTQEASNILRKALNLYRSSND 211

Query: 243 MDEAREVVSLIQE 255
            +    V +L++E
Sbjct: 212 PEGIDRVEALLRE 224


>gi|37572247|gb|AAH30776.2| Intraflagellar transport 88 homolog (Chlamydomonas) [Homo sapiens]
          Length = 833

 Score = 46.3 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/299 (11%), Positives = 88/299 (29%), Gaps = 56/299 (18%)

Query: 2   SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60
                +A+ I +    +  +       +++  + +G +  Q+S    +   +D      +
Sbjct: 437 QKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 496

Query: 61  YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
             K        ++ KA E++      D   +     +L           +  +A      
Sbjct: 497 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 549

Query: 120 YITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKL--------- 157
           ++  +   +N   V Y +   Y              Q++  +P D +             
Sbjct: 550 FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDRGG 609

Query: 158 ----MLQYMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEI 196
                 QY       +               ++ + + A  Y     + +      ++ +
Sbjct: 610 DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMV 669

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
              + + G Y  A+  ++     + +     E +  LV     L L D A+E    ++ 
Sbjct: 670 ASCFRRSGNYQKALDTYKDTHRKFPE---NVECLRFLVRLCTDLGLKD-AQEYARKLKR 724



 Score = 36.2 bits (83), Expect = 4.4,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 66/222 (29%), Gaps = 67/222 (30%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117
            KAV +L+++++++A E      +    + V   +    + + Y    + QA+S      
Sbjct: 429 NKAVTYLRQKDYNQAVEILKVLEKKD--SRVKSAAATNLSALYYMGKDFAQASSYADIAV 486

Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147
             + Y    P    +K      N DY                     Y +G++Y ++ R 
Sbjct: 487 NSDRY---NPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNR- 542

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
                      L    ++     NS                 A    +I   Y       
Sbjct: 543 -------LDEALDCFLKLHAILRNS-----------------AEVLYQIANIYELMENPS 578

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
            AI     V++           +++L E Y       +A + 
Sbjct: 579 QAIEWLMQVVSVIPTDPQV---LSKLGELYDRGGDKSQAFQY 617


>gi|188996580|ref|YP_001930831.1| tol-pal system protein YbgF [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931647|gb|ACD66277.1| tol-pal system protein YbgF [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 232

 Score = 46.3 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 63/154 (40%), Gaps = 25/154 (16%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           +    + V   +  +++Y+ A+    + N  ++ + F +  + +P + +   ++  +   
Sbjct: 93  KKEGKEEVAVPQNDKQLYQYALDLYFKGNIEESRKAFTEFLKKYPDSDLYGNAIFWAGQT 152

Query: 104 QYSAGKYQQAASLGEEYITQ-----------YPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
            Y+  KY+ A  + E ++ +           YP+          +G SY ++  +     
Sbjct: 153 FYAEKKYKDAIDIWEIFLKKCDEGKIKKCNKYPD------AMLKLGYSYIELGNE----- 201

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
              +   QY+  ++++Y +S     A+  + V +
Sbjct: 202 ---EKGKQYLQDLIKKYPDSEPASLAKKKLEVLK 232



 Score = 39.7 bits (92), Expect = 0.41,   Method: Composition-based stats.
 Identities = 15/114 (13%), Positives = 40/114 (35%), Gaps = 19/114 (16%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              +   +  +  +++Y +S     A                  G+ +    +Y  AI  
Sbjct: 120 GNIEESRKAFTEFLKKYPDSDLYGNAI--------------FWAGQTFYAEKKYKDAIDI 165

Query: 213 FQLVLAN-----YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +++ L               +AM +L  +Y+ L   ++ ++ +  + ++YP   
Sbjct: 166 WEIFLKKCDEGKIKKCNKYPDAMLKLGYSYIELGNEEKGKQYLQDLIKKYPDSE 219


>gi|15618578|ref|NP_224864.1| hypothetical protein CPn0668 [Chlamydophila pneumoniae CWL029]
 gi|15836200|ref|NP_300724.1| hypothetical protein CPj0668 [Chlamydophila pneumoniae J138]
 gi|33242025|ref|NP_876966.1| hypothetical protein CpB0694 [Chlamydophila pneumoniae TW-183]
 gi|4376968|gb|AAD18807.1| CT547 hypothetical protein [Chlamydophila pneumoniae CWL029]
 gi|8979040|dbj|BAA98875.1| CT547 hypothetical protein [Chlamydophila pneumoniae J138]
 gi|33236535|gb|AAP98623.1| hypothetical protein CpB0694 [Chlamydophila pneumoniae TW-183]
          Length = 318

 Score = 46.3 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 53/150 (35%)

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
             A   +++    FP   +  ++L   A +        +A    ++   Q+P        
Sbjct: 151 EDALRIYDEILTAFPSKDLGAQALYSKAALLIVKNDLTEATKTLKKLTLQFPLHILSSEA 210

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
           +  +   Y Q  +  P++ +           + +++ N P  +     V   R   A   
Sbjct: 211 FVRLSEIYLQQAKKEPHNLQYLHFAKLNEEAMKKQHPNHPLNEVVSANVGAMREHYARGL 270

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
              GR+Y K+ +  AA   ++  + NY D 
Sbjct: 271 YATGRFYEKKKKAEAANIYYRTAITNYPDT 300



 Score = 40.1 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 72/228 (31%), Gaps = 45/228 (19%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
              E + +   FLK+ NF KA   F   +  FP   +  ++  +     ++      A  
Sbjct: 42  SAEEYFSQGQEFLKKGNFRKALLCFGIITHHFPRDILRNQAQYLIGVCYFTQDHPDLADK 101

Query: 116 LGEEYITQYPESKNVDY------VYYLVGMSYAQ-------MIRDVPYDQRATKLMLQYM 162
               Y+       + +Y      + Y +   +AQ        +   P    A +  L+  
Sbjct: 102 AFASYLQL----PDAEYSEELFQMKYAIAQRFAQGKRKRICRLEGFPKLMNADEDALRIY 157

Query: 163 SRIVERYTNSPYVKGA---RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
             I+  + +      A   +  + + +N L                   A    + +   
Sbjct: 158 DEILTAFPSKDLGAQALYSKAALLIVKNDLTE-----------------ATKTLKKLTLQ 200

Query: 220 YSDAEHAEEAMARLVEAYVA--------LALMDEAREVVSLIQERYPQ 259
           +     + EA  RL E Y+         L  +  A+     +++++P 
Sbjct: 201 FPLHILSSEAFVRLSEIYLQQAKKEPHNLQYLHFAKLNEEAMKKQHPN 248


>gi|300869589|ref|ZP_07114170.1| TPR repeat-containing serine/threonin protein kinase [Oscillatoria
           sp. PCC 6506]
 gi|300332457|emb|CBN59370.1| TPR repeat-containing serine/threonin protein kinase [Oscillatoria
           sp. PCC 6506]
          Length = 735

 Score = 46.3 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/121 (9%), Positives = 37/121 (30%), Gaps = 20/121 (16%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           + +     Y++A      +N+  A   +        ++       K+       ++    
Sbjct: 369 NPQSAEVFYKRANANYDLKNYEAAIADYTQAIALDPNY------VKAYFNRGLTRFEIKD 422

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            + A     + +   P   +    YY  G++Y  +            + ++  ++++   
Sbjct: 423 LRGAIEDYTQLLKLQPNDPD---AYYERGLAYFGLQDYP--------VAIKDFTQVIRLQ 471

Query: 170 T 170
            
Sbjct: 472 P 472



 Score = 45.9 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 67/200 (33%), Gaps = 42/200 (21%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           +  L +    A   LV      +R        +    +E +++ V   +  + + A   F
Sbjct: 310 RLWLVLLGIGAAIALVCLLIFFNR-------PNPVKAKEYFDRGVEKSQVGDAAGAIAAF 362

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY--VYYLVG 138
           N+  +  P +    +     A   Y    Y+ A +   + I   P      Y   Y+  G
Sbjct: 363 NKSIQLNPQSA---EVFYKRANANYDLKNYEAAIADYTQAIALDPN-----YVKAYFNRG 414

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           ++  + I+D+       +  ++  +++++   N P                A  E  +  
Sbjct: 415 LTRFE-IKDL-------RGAIEDYTQLLKLQPNDPD---------------AYYERGLA- 450

Query: 199 YYLKRGEYVAAIPRFQLVLA 218
            Y    +Y  AI  F  V+ 
Sbjct: 451 -YFGLQDYPVAIKDFTQVIR 469



 Score = 35.5 bits (81), Expect = 9.1,   Method: Composition-based stats.
 Identities = 9/74 (12%), Positives = 22/74 (29%), Gaps = 8/74 (10%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            + +      +   A   +       P  +   + ++ +      Y    Y+ A +   +
Sbjct: 616 NRGLAHSAAGDREGAVADYTAAIGLNPNDYEAYSNRAKI-----HYDLKNYEDALADYVQ 670

Query: 120 YITQYPESKNVDYV 133
            I   P +    YV
Sbjct: 671 AIRLNP-NFAAAYV 683


>gi|260575510|ref|ZP_05843509.1| TPR repeat-containing protein [Rhodobacter sp. SW2]
 gi|259022430|gb|EEW25727.1| TPR repeat-containing protein [Rhodobacter sp. SW2]
          Length = 199

 Score = 46.3 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 7/70 (10%), Positives = 22/70 (31%), Gaps = 7/70 (10%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR--KSLLMSAFVQYSAGKYQQAASLG 117
           + E+    +++ ++  A ++    +   P    A    +    A   +  G    +    
Sbjct: 82  LLERGRKAMEQGDYEVAIQHLTALTDHAP--EFAEGWNA---LATAYFQNGDLGPSIEDI 136

Query: 118 EEYITQYPES 127
           +  +   P  
Sbjct: 137 QRTLALNPRH 146


>gi|109120148|ref|XP_001086373.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 2
           [Macaca mulatta]
 gi|109120152|ref|XP_001086485.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 3
           [Macaca mulatta]
          Length = 824

 Score = 46.3 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/299 (12%), Positives = 88/299 (29%), Gaps = 56/299 (18%)

Query: 2   SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60
                +A+ I +    +  +       +++  + +G +  Q+S    +   +D      +
Sbjct: 428 QKDYNQAVEILKMLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 487

Query: 61  YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
             K        ++ KA E++      D   +     +L           +  +A      
Sbjct: 488 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 540

Query: 120 YITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKL--------- 157
           ++  +   +N   V Y +   Y              Q++  VP D +             
Sbjct: 541 FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVVPTDPQVLSKLGELYDHEG 600

Query: 158 ----MLQYMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEI 196
                 QY       +               ++ + + A  Y     + +      ++ +
Sbjct: 601 DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMV 660

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
              + + G Y  A+  ++     + +     E +  LV     L L D A+E    ++ 
Sbjct: 661 ASCFRRSGNYQKALDTYKDTHRKFPE---NVECLRFLVRLCTDLGLKD-AQEYARKLKR 715



 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 66/222 (29%), Gaps = 67/222 (30%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117
            KAV +L+++++++A E      +    + V   +    + + Y    + QA+S      
Sbjct: 420 NKAVTYLRQKDYNQAVEILKMLEKKD--SRVKSAAATNLSALYYMGKDFAQASSYADIAV 477

Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147
             + Y    P    +K      N DY                     Y +G++Y ++ R 
Sbjct: 478 NSDRY---NPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNR- 533

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
                      L    ++     NS                 A    +I   Y       
Sbjct: 534 -------LDEALDCFLKLHAILRNS-----------------AEVLYQIANIYELMENPS 569

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
            AI     V++           +++L E Y       +A + 
Sbjct: 570 QAIEWLMQVVSVVPTDPQV---LSKLGELYDHEGDKSQAFQY 608


>gi|254410994|ref|ZP_05024772.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
 gi|196182349|gb|EDX77335.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
          Length = 407

 Score = 46.3 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 46/147 (31%), Gaps = 30/147 (20%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
              +Y  A +  ++ I   P   NV   +Y  G+   ++ R         K  +    ++
Sbjct: 259 ENRQYDAAIAAYDKAIKLNP---NVYQAWYNRGLCLTELHR--------FKEAIASYQKL 307

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA-- 223
           ++   +               N L       G  +    +Y  AI  +   L    +   
Sbjct: 308 IQLNPDFERAW----------NSL-------GNAFYHSQQYTEAITAYDHALQLEPNLAD 350

Query: 224 EHAEEAMARLVEAYVALALMDEAREVV 250
                A  R ++ YV LA+    + + 
Sbjct: 351 TWYNRACCRALQGYVELAIDSLKQAIA 377



 Score = 41.3 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/144 (10%), Positives = 52/144 (36%), Gaps = 18/144 (12%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
            ++ VCFL        +     +  D+++    +++    L+ + +  A   +++  +  
Sbjct: 222 LALIVCFLGFVWLIKQKGNQTPNAADLQW----FDQGNKLLENRQYDAAIAAYDKAIKLN 277

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
           P      ++            ++++A +  ++ I   P+ +     +  +G ++      
Sbjct: 278 P-NVY--QAWYNRGLCLTELHRFKEAIASYQKLIQLNPDFER---AWNSLGNAFY----- 326

Query: 148 VPYDQRATKLMLQYMSRIVERYTN 171
             + Q+ T   +      ++   N
Sbjct: 327 --HSQQYT-EAITAYDHALQLEPN 347



 Score = 38.9 bits (90), Expect = 0.69,   Method: Composition-based stats.
 Identities = 17/128 (13%), Positives = 39/128 (30%), Gaps = 16/128 (12%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y + +   +   F +A   + +  +  P F     ++        Y + +Y +A +  + 
Sbjct: 285 YNRGLCLTELHRFKEAIASYQKLIQLNPDF----ERAWNSLGNAFYHSQQYTEAITAYDH 340

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +   P   N+   +Y      A         Q   +L +  + + +    N        
Sbjct: 341 ALQLEP---NLADTWYNRACCRAL--------QGYVELAIDSLKQAIAVNPNLREQAKTD 389

Query: 180 FYVTVGRN 187
                 RN
Sbjct: 390 ADFESIRN 397


>gi|257060748|ref|YP_003138636.1| hypotheticalprotein [Cyanothece sp. PCC 8802]
 gi|256590914|gb|ACV01801.1| TPR repeat-containing protein [Cyanothece sp. PCC 8802]
          Length = 270

 Score = 46.3 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 49/288 (17%), Positives = 99/288 (34%), Gaps = 70/288 (24%)

Query: 24  LTIFFSIAVCFLVGWERQSS---RDVYLDSVTDVRYQR--EVYEKAVLFLKEQNFSKAYE 78
           + +F ++     +G+    +   +D  + S+T+ + Q+  E+ +KA+   ++ NFS+A  
Sbjct: 2   IRLFVTLLTILWLGFATIPTALAQDTSILSITEEQLQQGEEIAKKAIEATEKGNFSQAEA 61

Query: 79  YFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY---- 132
           Y++Q    FP      + +        + S  K  +A +   + IT  P   +  Y    
Sbjct: 62  YWSQLIEQFPSNPAVWSNR-----GNSRVSQNKLDEAIADFNQAITLAPNEPD-PYLNRG 115

Query: 133 -VY-----YLVGMSYAQMIRDVPYDQRAT----------------KLMLQYMSRIVERYT 170
                   Y   ++    +  +  D                    +  L+   + VE   
Sbjct: 116 AALEGQGKYQEAITDYNHV--LELDPHDAMAYNNRGNAEGGLGQWEKALEDYQKAVEIQP 173

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
           N  + K            LA+ ++         G    A+ + + ++  Y        A+
Sbjct: 174 NFAFAK--------ANVALASYQL---------GNTQEALNQMRKIVRKYPMFPDMRAAL 216

Query: 231 -ARLVEAYVALALMDEARE--VVSL-IQERYPQGYW----ARYVETLV 270
            A L E    L    EA    V ++ +  RY    W     R+   +V
Sbjct: 217 TAVLWE----LGQQGEAESNWVAAVGMDNRYQDLEWVSHIRRWPPEMV 260


>gi|157149134|ref|YP_001456453.1| cellulose synthase subunit BcsC [Citrobacter koseri ATCC BAA-895]
 gi|157086339|gb|ABV16017.1| hypothetical protein CKO_04973 [Citrobacter koseri ATCC BAA-895]
          Length = 1194

 Score = 46.3 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 81/232 (34%), Gaps = 28/232 (12%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              S +   +D +        + ++A     + N+++A E   +     P +        
Sbjct: 477 SLSSRQRQSIDDIERSLENDRLAQQAEALENQGNWAQAAELHRRRLALDPGSVW---VTY 533

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGM----SYAQMIRDVPYDQ 152
             +   ++AG+  QA +       Q P   +  Y Y  YL G     +    I ++P  Q
Sbjct: 534 RLSRDLWNAGQRSQADAHMRALARQKPNDPDQVYAYGLYLAGNDQDRAAMAHINNLPRSQ 593

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK-----------EVEIGRYYL 201
                    +  + +R  N+  ++ A      G+ + A             ++ +  +  
Sbjct: 594 WN-----SNIQELADRLQNNQVLETASRLRDSGKEREAETLLRQQPASTRIDLTLADWAQ 648

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +R +Y +A   +  VLA         +A   L E Y+A      AR  ++ +
Sbjct: 649 QRRDYSSARAAYDAVLAREPG---NVDARLGLTEVYIAQGDNAAARAELAKL 697


>gi|325109980|ref|YP_004271048.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces
           brasiliensis DSM 5305]
 gi|324970248|gb|ADY61026.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces
           brasiliensis DSM 5305]
          Length = 482

 Score = 46.3 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 42/123 (34%), Gaps = 15/123 (12%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
            ++D      +Y++ +  L++ +        F       P    +  +    A     A 
Sbjct: 152 EMSDADKANMLYQRGLAKLQQDDTIDGGVADFKAAVALQPKHMASLTA---LADAYAMAE 208

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           + + A +   ++I  YPE   + Y     GM + QM          T+  LQ   + VE 
Sbjct: 209 QNENALAAFNQFIAAYPEHP-IGY--NNRGMFHKQMDD--------TQAALQDFQKAVEL 257

Query: 169 YTN 171
              
Sbjct: 258 QPK 260


>gi|257457860|ref|ZP_05623019.1| tetratricopeptide repeat domain protein [Treponema vincentii ATCC
           35580]
 gi|257444573|gb|EEV19657.1| tetratricopeptide repeat domain protein [Treponema vincentii ATCC
           35580]
          Length = 300

 Score = 46.3 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 64/191 (33%), Gaps = 24/191 (12%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLF------------ 67
            K  L  F   ++C L          +   S +D     + +E+A+              
Sbjct: 3   KKTVLAYFLCFSICSLFADSSDLLTGLDAYSRSDWNAAVQSFERALTAAPDDRTEALYWL 62

Query: 68  ----LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
                  QN+ +A  Y +    +      A +       + + +G Y+ ++ +  ++I  
Sbjct: 63  VMSETSAQNYQRALYYADAFLENASEDERAAEVSYQKGRLLHLSGDYETSSKILYQFIED 122

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
           YPE   V   YY +G +                   +  S IV  Y  S  V  AR+ + 
Sbjct: 123 YPEHPKVPSAYYWIGENLYAA--------GNYTEARKVFSGIVADYPQSGKVNEARYKIV 174

Query: 184 VGRNQLAAKEV 194
           +   Q   +E+
Sbjct: 175 LIDQQSVREEL 185



 Score = 40.5 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 58/172 (33%), Gaps = 24/172 (13%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
             +      +++ A + F +     P      ++L      + SA  YQ+A    + ++ 
Sbjct: 27  TGLDAYSRSDWNAAVQSFERALTAAP--DDRTEALYWLVMSETSAQNYQRALYYADAFLE 84

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
              E +    V Y  G         + +     +   + + + +E Y   P V  A +++
Sbjct: 85  NASEDERAAEVSYQKG--------RLLHLSGDYETSSKILYQFIEDYPEHPKVPSAYYWI 136

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
                      +         G Y  A   F  ++A+Y  +    EA  ++V
Sbjct: 137 GE--------NLYAA------GNYTEARKVFSGIVADYPQSGKVNEARYKIV 174


>gi|162454729|ref|YP_001617096.1| hypothetical protein sce6447 [Sorangium cellulosum 'So ce 56']
 gi|161165311|emb|CAN96616.1| hypothetical protein sce6447 [Sorangium cellulosum 'So ce 56']
          Length = 947

 Score = 46.3 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 84/256 (32%), Gaps = 37/256 (14%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
            C              +     V   + + + A   ++ + F KA   + +   D P   
Sbjct: 8   GCRRGARATPCCPQQEIPIAVAVDRDKVL-QTAQKLVERKRFDKAIAEYQKLVADDP--- 63

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
              ++LL    +     +Y +A +  E     Y           L  ++  + IR++ + 
Sbjct: 64  KDVRTLLKIGDLYLKTEEYVEAITTYERVGQFYSLQGFA-----LKAIAVYKQIREIIH- 117

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
            +           IV      P +      + +  + LAA + E+    L+ G    AI 
Sbjct: 118 -KHVPQYEDRFGHIV------PRLAEIYTQLGLTSDALAAYD-EVATRLLRAGRDRDAID 169

Query: 212 RFQLVLANYSDAEHAE----EAMARLVEAYVA--------------LALMDEAREVVSLI 253
            F+ V+    +   A     EA+ R V  Y A              L   D+A +VV  +
Sbjct: 170 IFKRVVDLDPNNPLAYLRLAEALIR-VRDYDAAIQRFGTAAELLLKLGRRDDALKVVERL 228

Query: 254 QERYPQGYWARYVETL 269
            +  P   +AR    +
Sbjct: 229 LQHRPDARFARMAAEI 244



 Score = 40.9 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 57/192 (29%), Gaps = 47/192 (24%)

Query: 61  YEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y++ A   L+      A + F +     P   +A    L  A        Y  A    + 
Sbjct: 151 YDEVATRLLRAGRDRDAIDIFKRVVDLDPNNPLA---YLRLAEALIRVRDYDAAI---QR 204

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           +                 G +   +++    D       L+ + R+++   ++ + + A 
Sbjct: 205 F-----------------GTAAELLLKLGRRD-----DALKVVERLLQHRPDARFARMA- 241

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                               YL RG+    +     +   + +     E +A L  A+  
Sbjct: 242 -----------------AEIYLDRGDPSDGMSALTKLQIAFKENPKDLETLALLARAFDL 284

Query: 240 LALMDEAREVVS 251
           L    +A EV  
Sbjct: 285 LGQPAKAIEVQK 296


>gi|317011474|gb|ADU85221.1| paralysed flagella protein [Helicobacter pylori SouthAfrica7]
          Length = 803

 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 50/137 (36%), Gaps = 9/137 (6%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             +T   Y    Y +A   +  Q +  A    ++  +++P     +   L+        G
Sbjct: 189 PLLTTKGYDLNAYLEAKKQMDSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIALGKLG 248

Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            K      +G ++I  YP   N+    Y V  +  +            K  +++  RI+ 
Sbjct: 249 IKKTLLIDIGTKWIKNYPADPNIPEALYYVAKALNEN--------NNYKQAMRFYKRILL 300

Query: 168 RYTNSPYVKGARFYVTV 184
            Y NS Y   A+ ++ +
Sbjct: 301 EYKNSRYAPLAQMHLAI 317



 Score = 39.7 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 11/99 (11%), Positives = 30/99 (30%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
             + RA   +    ++   + L I     +                +   D      +Y 
Sbjct: 218 RTISRAFKNYPQTIFKKDLYLLEIIALGKLGIKKTLLIDIGTKWIKNYPADPNIPEALYY 277

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
            A    +  N+ +A  ++ +   ++  +  A  + +  A
Sbjct: 278 VAKALNENNNYKQAMRFYKRILLEYKNSRYAPLAQMHLA 316


>gi|284007878|emb|CBA73799.1| conserved hypothetical protein [Arsenophonus nasoniae]
          Length = 253

 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 43/124 (34%), Gaps = 22/124 (17%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
            QA S  + +I  YP+S       Y +G             Q        Y + +V+ Y 
Sbjct: 150 AQAISSFQHFIKTYPKSNLQPNANYWLGQLNYN--------QGNKDDAAFYFATVVKNYP 201

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
           NSP    + + V +                 ++G+   A   +Q V+  Y  +  A+ A 
Sbjct: 202 NSPKGAESLYKVGLLMQ--------------EKGQSDKARVVYQQVIKAYPGSPSAQLAE 247

Query: 231 ARLV 234
            +L 
Sbjct: 248 KKLA 251



 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 52/168 (30%), Gaps = 31/168 (18%)

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
               +     A +  +      P S+  DY      V ++    I+     Q A    + 
Sbjct: 110 ANADSNNSSNAVTTAK------PASEKADYDTA---VALA----IKSKSKQQIA--QAIS 154

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
                ++ Y  S     A +++                    +G    A   F  V+ NY
Sbjct: 155 SFQHFIKTYPKSNLQPNANYWLGQLN--------------YNQGNKDDAAFYFATVVKNY 200

Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
            ++    E++ ++          D+AR V   + + YP    A+  E 
Sbjct: 201 PNSPKGAESLYKVGLLMQEKGQSDKARVVYQQVIKAYPGSPSAQLAEK 248



 Score = 44.0 bits (103), Expect = 0.020,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 37/111 (33%), Gaps = 8/111 (7%)

Query: 75  KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
           +A   F    + +P + +   +      + Y+ G    AA      +  YP S       
Sbjct: 151 QAISSFQHFIKTYPKSNLQPNANYWLGQLNYNQGNKDDAAFYFATVVKNYPNSPKGAESL 210

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           Y VG+        +  ++  +        ++++ Y  SP  + A   +   
Sbjct: 211 YKVGL--------LMQEKGQSDKARVVYQQVIKAYPGSPSAQLAEKKLASL 253



 Score = 40.1 bits (93), Expect = 0.37,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 28/70 (40%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y    L   + N   A  YF    +++P +    +SL     +    G+  +A  + ++ 
Sbjct: 174 YWLGQLNYNQGNKDDAAFYFATVVKNYPNSPKGAESLYKVGLLMQEKGQSDKARVVYQQV 233

Query: 121 ITQYPESKNV 130
           I  YP S + 
Sbjct: 234 IKAYPGSPSA 243



 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 2/63 (3%)

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           AI  FQ  +  Y  +     A   L +        D+A    + + + YP     +  E+
Sbjct: 152 AISSFQHFIKTYPKSNLQPNANYWLGQLNYNQGNKDDAAFYFATVVKNYPNS--PKGAES 209

Query: 269 LVK 271
           L K
Sbjct: 210 LYK 212


>gi|29169140|gb|AAO66314.1| hypothetical adventurous gliding motility protein U [Myxococcus
           xanthus]
          Length = 1219

 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 57/161 (35%), Gaps = 29/161 (18%)

Query: 94  RKSLLMSAFVQYSAGKY-QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           +++    A       +Y + A     + + +YP  +  D V + +G    +  +D     
Sbjct: 164 QRAKAEKAEFSAKQKEYGKLAVEQYTKIVQEYPNFERTDEVLFFLGQYLMEDGQD----- 218

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL-----KRGEYV 207
              +  L    R+VE++  S ++  A                  G YY      KR E  
Sbjct: 219 ---RKALVAFKRLVEKHPQSKFIPDAY--------------FAFGEYYFNNSKGKRPELE 261

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
            A+  ++     + +++    A+ +    +  +   + A++
Sbjct: 262 KALVAYKKAAE-FPESQVYAFALYKQGWCHYNMGDFESAKD 301



 Score = 42.8 bits (100), Expect = 0.056,   Method: Composition-based stats.
 Identities = 31/229 (13%), Positives = 74/229 (32%), Gaps = 32/229 (13%)

Query: 45  DVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCSRDFP-----FAGVARKSLL 98
           + YL  V     + E+ ++ A ++ +  +F +A   F++ +  +P         A +   
Sbjct: 608 ERYLKYVPKGEKRVEIAFKAANIYYRHNHFDEAVLRFSEIALGYPEYKFENGERAAEISA 667

Query: 99  MSA-FVQYSAGKYQQAASLGEEYITQYPESKNV------DYVYYLVGMSYAQMIRDVPYD 151
                  +    Y +       +   Y   K        D    L+  S  +++  +  +
Sbjct: 668 NLILDSYHLLQDYAKVNEWARRF---YANDKLAVGKFRDDLAK-LIEQSSFKLVSQLE-E 722

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           ++  +   +     V+ +  +                LA     +   Y K      AI 
Sbjct: 723 KKEFEKAAEAYLAFVKDFPQTEIAD------------LALYNASVD--YYKAKRLDKAIE 768

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
             + + A Y  ++H  +++    EA  A+   ++A          Y + 
Sbjct: 769 VRKRLFAEYPRSKHVPDSIYANAEALEAIGDFEDAAATYEAYVRGYERS 817



 Score = 35.9 bits (82), Expect = 6.8,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 29/72 (40%), Gaps = 1/72 (1%)

Query: 197 GRYYLKRGEYVA-AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
             +  K+ EY   A+ ++  ++  Y + E  +E +  L +  +      +A      + E
Sbjct: 171 AEFSAKQKEYGKLAVEQYTKIVQEYPNFERTDEVLFFLGQYLMEDGQDRKALVAFKRLVE 230

Query: 256 RYPQGYWARYVE 267
           ++PQ  +     
Sbjct: 231 KHPQSKFIPDAY 242



 Score = 35.5 bits (81), Expect = 7.4,   Method: Composition-based stats.
 Identities = 12/105 (11%), Positives = 34/105 (32%), Gaps = 6/105 (5%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
            +  +     R    ++      +++    KA   F +     P +     +        
Sbjct: 190 KIVQEYPNFERTDEVLFFLGQYLMEDGQDRKALVAFKRLVEKHPQSKFIPDAYFAFGEYY 249

Query: 105 YSAG-----KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
           ++       + ++A    ++   ++PES+   +  Y  G  +  M
Sbjct: 250 FNNSKGKRPELEKALVAYKK-AAEFPESQVYAFALYKQGWCHYNM 293


>gi|326201788|ref|ZP_08191659.1| tetratricopeptide TPR_2 [Clostridium papyrosolvens DSM 2782]
 gi|325988388|gb|EGD49213.1| tetratricopeptide TPR_2 [Clostridium papyrosolvens DSM 2782]
          Length = 371

 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/121 (13%), Positives = 38/121 (31%), Gaps = 6/121 (4%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
            Y  YK+       +A+           +   + +        ++  +      ++ + +
Sbjct: 246 LYGQYKYVEAADMLLALPAKDLSAENKKKYDSIKANILNSAANQLTTEGNSLFNKKKYKE 305

Query: 76  AYEYFNQCS---RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
           A +   +       +PF     K+L +      +  + Q+ A    + I  YP S    Y
Sbjct: 306 AIQKLEKVFTYGAKWPFGD---KALYVLGKSYVANNEPQKGAETYNKLINDYPASTYSRY 362

Query: 133 V 133
            
Sbjct: 363 A 363



 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 33/71 (46%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
             + +Y  AI + + V    +     ++A+  L ++YVA     +  E  + +   YP  
Sbjct: 298 FNKKKYKEAIQKLEKVFTYGAKWPFGDKALYVLGKSYVANNEPQKGAETYNKLINDYPAS 357

Query: 261 YWARYVETLVK 271
            ++RY ++ ++
Sbjct: 358 TYSRYAKSRLE 368


>gi|88604422|ref|YP_504600.1| TPR repeat-containing protein [Methanospirillum hungatei JF-1]
 gi|88189884|gb|ABD42881.1| TPR repeat [Methanospirillum hungatei JF-1]
          Length = 565

 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 38/123 (30%), Gaps = 14/123 (11%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D       Y + V   +   +  A   F++     P    A         +    G+ + 
Sbjct: 388 DPMNPEAWYYRGVTQYELGRYQDALCSFDKTILLDPGNAWA---YYYRGDILQKGGQCEY 444

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A +   + I   P    + + YY+ G  Y    R         +L      R ++++  +
Sbjct: 445 AIAYLNKGIQLDPT---IPWTYYVKGNCYLNQSR--------YQLAADEFDRSIDQFPCN 493

Query: 173 PYV 175
            + 
Sbjct: 494 RWA 496



 Score = 35.9 bits (82), Expect = 5.6,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 22/74 (29%), Gaps = 3/74 (4%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
              G  Y + G Y  AI   Q  L           A   +  AY  L     AR      
Sbjct: 192 YFTGTTYTELGNYAQAIDALQSALTL---DPSNAGAYYEMGRAYEKLGNRTAARNYYETA 248

Query: 254 QERYPQGYWARYVE 267
            +  P   W R+V 
Sbjct: 249 IKLNPDNVWTRFVY 262


>gi|172037655|ref|YP_001804156.1| hypothetical protein cce_2742 [Cyanothece sp. ATCC 51142]
 gi|171699109|gb|ACB52090.1| unknown [Cyanothece sp. ATCC 51142]
          Length = 270

 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/281 (12%), Positives = 78/281 (27%), Gaps = 66/281 (23%)

Query: 19  LYKFALTIFFSIAV-CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           + +  L++   + +   +       +++        V+    + +KA+   +  +F +A 
Sbjct: 1   MIRCILSVLIILVLWAGVTPIGLAQTQENPTIIEEKVQQGEAIAQKAIEATENGDFGQAE 60

Query: 78  EYFNQCSRDFPFAG--VAR-------KSLLMSAFVQYS---------------------- 106
            Y+ +    FP      +        ++ L +A   ++                      
Sbjct: 61  AYWTELVEAFPSNPAVWSNRGNARVSQNKLEAAIADFNEAIKLAPDAPDPYLNRGTALEG 120

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
            G Y+ A +     +   P             M+Y     +    Q      L    + V
Sbjct: 121 QGNYEAAIADYNRVLELNPND----------AMAYNNR-GNAESGQGDWDKALTDYQKAV 169

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
           E   N  + +     V                 Y + G    AI   + ++  Y      
Sbjct: 170 EIAPNFAFARANAALV-----------------YYQIGNQGEAITEMRNLVRKYPMFPDM 212

Query: 227 EEAMARLVEAYVALALMDEARE--VVSL-IQERYPQGYWAR 264
             A+         +    EA    V ++ +  RY    W +
Sbjct: 213 RAAL---TAVLWNMGQQGEAESHWVAAVGMDNRYQDLNWVK 250


>gi|157927998|gb|ABW03295.1| intraflagellar transport 88 homolog (Chlamydomonas) [synthetic
           construct]
 gi|157928711|gb|ABW03641.1| intraflagellar transport 88 homolog (Chlamydomonas) [synthetic
           construct]
          Length = 824

 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/299 (11%), Positives = 88/299 (29%), Gaps = 56/299 (18%)

Query: 2   SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60
                +A+ I +    +  +       +++  + +G +  Q+S    +   +D      +
Sbjct: 428 QKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 487

Query: 61  YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
             K        ++ KA E++      D   +     +L           +  +A      
Sbjct: 488 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 540

Query: 120 YITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKL--------- 157
           ++  +   +N   V Y +   Y              Q++  +P D +             
Sbjct: 541 FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDRGG 600

Query: 158 ----MLQYMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEI 196
                 QY       +               ++ + + A  Y     + +      ++ +
Sbjct: 601 DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMV 660

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
              + + G Y  A+  ++     + +     E +  LV     L L D A+E    ++ 
Sbjct: 661 ASCFRRSGNYQKALDTYKDTHRKFPE---NVECLRFLVRLCTDLGLKD-AQEYARKLKR 715



 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 66/222 (29%), Gaps = 67/222 (30%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117
            KAV +L+++++++A E      +    + V   +    + + Y    + QA+S      
Sbjct: 420 NKAVTYLRQKDYNQAVEILKVLEKKD--SRVKSAAATNLSALYYMGKDFAQASSYADIAV 477

Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147
             + Y    P    +K      N DY                     Y +G++Y ++ R 
Sbjct: 478 NSDRY---NPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNR- 533

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
                      L    ++     NS                 A    +I   Y       
Sbjct: 534 -------LDEALDCFLKLHAILRNS-----------------AEVLYQIANIYELMENPS 569

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
            AI     V++           +++L E Y       +A + 
Sbjct: 570 QAIEWLMQVVSVIPTDPQV---LSKLGELYDRGGDKSQAFQY 608


>gi|153840013|ref|ZP_01992680.1| lipoprotein, ComL family [Vibrio parahaemolyticus AQ3810]
 gi|149746444|gb|EDM57459.1| lipoprotein, ComL family [Vibrio parahaemolyticus AQ3810]
          Length = 66

 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 7/56 (12%)

Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
          T+   +AV  L G     S++  +  V       E+Y  A + L+  N+  A E  
Sbjct: 5  TLTGLLAVSLLFGCA---SKEEIVPDVP----PSELYADAQVSLQSGNWLSAIEKL 53


>gi|108760059|ref|YP_633028.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622]
 gi|108463939|gb|ABF89124.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622]
          Length = 1218

 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 57/161 (35%), Gaps = 29/161 (18%)

Query: 94  RKSLLMSAFVQYSAGKY-QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           +++    A       +Y + A     + + +YP  +  D V + +G    +  +D     
Sbjct: 164 QRAKAEKAEFSAKQKEYGKLAVEQYTKIVQEYPNFERTDEVLFFLGQYLMEDGQD----- 218

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL-----KRGEYV 207
              +  L    R+VE++  S ++  A                  G YY      KR E  
Sbjct: 219 ---RKALVAFKRLVEKHPQSKFIPDAY--------------FAFGEYYFNNSKGKRPELE 261

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
            A+  ++     + +++    A+ +    +  +   + A++
Sbjct: 262 KALVAYKKAAE-FPESQVYAFALYKQGWCHYNMGDFESAKD 301



 Score = 42.8 bits (100), Expect = 0.057,   Method: Composition-based stats.
 Identities = 31/229 (13%), Positives = 74/229 (32%), Gaps = 32/229 (13%)

Query: 45  DVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCSRDFP-----FAGVARKSLL 98
           + YL  V     + E+ ++ A ++ +  +F +A   F++ +  +P         A +   
Sbjct: 608 ERYLKYVPKGEKRVEIAFKAANIYYRHNHFDEAVLRFSEIALGYPEYKFENGERAAEISA 667

Query: 99  MSA-FVQYSAGKYQQAASLGEEYITQYPESKNV------DYVYYLVGMSYAQMIRDVPYD 151
                  +    Y +       +   Y   K        D    L+  S  +++  +  +
Sbjct: 668 NLILDSYHLLQDYAKVNEWARRF---YANDKLAVGKFRDDLAK-LIEQSSFKLVSQLE-E 722

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           ++  +   +     V+ +  +                LA     +   Y K      AI 
Sbjct: 723 KKEFEKAAEAYLAFVKDFPQTEIAD------------LALYNASVD--YYKAKRLDKAIE 768

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
             + + A Y  ++H  +++    EA  A+   ++A          Y + 
Sbjct: 769 VRKRLFAEYPRSKHVPDSIYANAEALEAIGDFEDAAATYEAYVRGYERS 817



 Score = 35.9 bits (82), Expect = 6.8,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 29/72 (40%), Gaps = 1/72 (1%)

Query: 197 GRYYLKRGEYVA-AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
             +  K+ EY   A+ ++  ++  Y + E  +E +  L +  +      +A      + E
Sbjct: 171 AEFSAKQKEYGKLAVEQYTKIVQEYPNFERTDEVLFFLGQYLMEDGQDRKALVAFKRLVE 230

Query: 256 RYPQGYWARYVE 267
           ++PQ  +     
Sbjct: 231 KHPQSKFIPDAY 242



 Score = 35.5 bits (81), Expect = 7.4,   Method: Composition-based stats.
 Identities = 12/105 (11%), Positives = 34/105 (32%), Gaps = 6/105 (5%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
            +  +     R    ++      +++    KA   F +     P +     +        
Sbjct: 190 KIVQEYPNFERTDEVLFFLGQYLMEDGQDRKALVAFKRLVEKHPQSKFIPDAYFAFGEYY 249

Query: 105 YSAG-----KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
           ++       + ++A    ++   ++PES+   +  Y  G  +  M
Sbjct: 250 FNNSKGKRPELEKALVAYKK-AAEFPESQVYAFALYKQGWCHYNM 293


>gi|28558993|ref|NP_783195.2| intraflagellar transport protein 88 homolog isoform 1 [Homo
           sapiens]
 gi|206729873|sp|Q13099|IFT88_HUMAN RecName: Full=Intraflagellar transport protein 88 homolog; AltName:
           Full=Recessive polycystic kidney disease protein Tg737
           homolog; AltName: Full=Tetratricopeptide repeat protein
           10; Short=TPR repeat protein 10
 gi|122889168|emb|CAH70874.2| intraflagellar transport 88 homolog (Chlamydomonas) [Homo sapiens]
 gi|123233608|emb|CAI14390.2| intraflagellar transport 88 homolog (Chlamydomonas) [Homo sapiens]
          Length = 833

 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/299 (11%), Positives = 88/299 (29%), Gaps = 56/299 (18%)

Query: 2   SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60
                +A+ I +    +  +       +++  + +G +  Q+S    +   +D      +
Sbjct: 437 QKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 496

Query: 61  YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
             K        ++ KA E++      D   +     +L           +  +A      
Sbjct: 497 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 549

Query: 120 YITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKL--------- 157
           ++  +   +N   V Y +   Y              Q++  +P D +             
Sbjct: 550 FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREG 609

Query: 158 ----MLQYMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEI 196
                 QY       +               ++ + + A  Y     + +      ++ +
Sbjct: 610 DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMV 669

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
              + + G Y  A+  ++     + +     E +  LV     L L D A+E    ++ 
Sbjct: 670 ASCFRRSGNYQKALDTYKDTHRKFPE---NVECLRFLVRLCTDLGLKD-AQEYARKLKR 724



 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 66/222 (29%), Gaps = 67/222 (30%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117
            KAV +L+++++++A E      +    + V   +    + + Y    + QA+S      
Sbjct: 429 NKAVTYLRQKDYNQAVEILKVLEKKD--SRVKSAAATNLSALYYMGKDFAQASSYADIAV 486

Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147
             + Y    P    +K      N DY                     Y +G++Y ++ R 
Sbjct: 487 NSDRY---NPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNR- 542

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
                      L    ++     NS                 A    +I   Y       
Sbjct: 543 -------LDEALDCFLKLHAILRNS-----------------AEVLYQIANIYELMENPS 578

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
            AI     V++           +++L E Y       +A + 
Sbjct: 579 QAIEWLMQVVSVIPTDPQV---LSKLGELYDREGDKSQAFQY 617


>gi|119628674|gb|EAX08269.1| intraflagellar transport 88 homolog (Chlamydomonas), isoform CRA_d
           [Homo sapiens]
 gi|119628678|gb|EAX08273.1| intraflagellar transport 88 homolog (Chlamydomonas), isoform CRA_d
           [Homo sapiens]
          Length = 833

 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/299 (11%), Positives = 88/299 (29%), Gaps = 56/299 (18%)

Query: 2   SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60
                +A+ I +    +  +       +++  + +G +  Q+S    +   +D      +
Sbjct: 437 QKDYNQAVEILKVLEKKDNRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 496

Query: 61  YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
             K        ++ KA E++      D   +     +L           +  +A      
Sbjct: 497 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 549

Query: 120 YITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKL--------- 157
           ++  +   +N   V Y +   Y              Q++  +P D +             
Sbjct: 550 FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREG 609

Query: 158 ----MLQYMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEI 196
                 QY       +               ++ + + A  Y     + +      ++ +
Sbjct: 610 DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMV 669

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
              + + G Y  A+  ++     + +     E +  LV     L L D A+E    ++ 
Sbjct: 670 ASCFRRSGNYQKALDTYKDTHRKFPE---NVECLRFLVRLCTDLGLKD-AQEYARKLKR 724



 Score = 35.5 bits (81), Expect = 7.4,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 65/222 (29%), Gaps = 67/222 (30%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117
            KAV +L+++++++A E      +      V   +    + + Y    + QA+S      
Sbjct: 429 NKAVTYLRQKDYNQAVEILKVLEKKD--NRVKSAAATNLSALYYMGKDFAQASSYADIAV 486

Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147
             + Y    P    +K      N DY                     Y +G++Y ++ R 
Sbjct: 487 NSDRY---NPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNR- 542

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
                      L    ++     NS                 A    +I   Y       
Sbjct: 543 -------LDEALDCFLKLHAILRNS-----------------AEVLYQIANIYELMENPS 578

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
            AI     V++           +++L E Y       +A + 
Sbjct: 579 QAIEWLMQVVSVIPTDPQV---LSKLGELYDREGDKSQAFQY 617


>gi|110833621|ref|YP_692480.1| hypothetical protein ABO_0760 [Alcanivorax borkumensis SK2]
 gi|110646732|emb|CAL16208.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
          Length = 254

 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 45/155 (29%), Gaps = 24/155 (15%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
            L      +  +  +    D    R  Y  A   L   +FS A   F    +DFP     
Sbjct: 107 TLAERGSTAKEEAAVAGNNDPEADRAAYNAAKDKLVAGDFSGAIAGFEAYLKDFPQG--- 163

Query: 94  RKSLLMSAFVQY---------SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
               L  A   +              Q+A    +     YP+        Y++ +  A  
Sbjct: 164 ----LSRADAHFWAGKLYSDQKEPDLQKAQGHFQAVADNYPDHSKASKSLYILAVMQANA 219

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
                            + +++++Y +S   K A+
Sbjct: 220 --------GEISPAKVNLHKLIKQYQDSREAKQAQ 246


>gi|66499186|ref|XP_395748.2| PREDICTED: FK506-binding protein 59 [Apis mellifera]
          Length = 459

 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/144 (10%), Positives = 45/144 (31%), Gaps = 27/144 (18%)

Query: 59  EVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR------------KSLLMSAFVQY 105
           ++Y EK   + K   +S A + + + +    +                  + L  A    
Sbjct: 251 KMYKEKGTNYFKANKYSLAIKMYKKITSVLEYGEDFEGDLKIERNNLILSAHLNLALCYL 310

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
                 +A     E +   P+++      +  G +Y  +         + ++ ++    +
Sbjct: 311 KLDNNVEAKDSCNEALKLSPQNEK---ALFRRGQAYLAL--------ASPEIAIKDFQEV 359

Query: 166 VERYTNSPYVKGARFYVTVGRNQL 189
           ++    +     A   + +  N +
Sbjct: 360 LKVEPKN---TAAVKQIGICNNLI 380


>gi|126662914|ref|ZP_01733913.1| hypothetical protein FBBAL38_06145 [Flavobacteria bacterium BAL38]
 gi|126626293|gb|EAZ96982.1| hypothetical protein FBBAL38_06145 [Flavobacteria bacterium BAL38]
          Length = 593

 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA-LALMDEAREVVSL 252
           ++I   Y ++ EY  A+  +Q +L N+ D  + +EA+    E Y   L   ++A+ +   
Sbjct: 507 LKIADIYFRKKEYQKALNYYQNILDNHKDGIYIDEALFFSAEIYRKYLLDNEKAKPLYEK 566

Query: 253 IQERYPQGYWA 263
           +   +P   + 
Sbjct: 567 MVLEHPDSLYY 577



 Score = 44.3 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 47/128 (36%), Gaps = 7/128 (5%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           + Y KA L L ++    A + F           +  ++LL  A + +   +YQ+A +  +
Sbjct: 468 QAYAKADLQLYQKKNEDALQSFLTILEKHKGESIEDETLLKIADIYFRKKEYQKALNYYQ 527

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
             +  + +   +D   +     Y + + D        +       ++V  + +S Y   +
Sbjct: 528 NILDNHKDGIYIDEALFFSAEIYRKYLLDN-------EKAKPLYEKMVLEHPDSLYYTES 580

Query: 179 RFYVTVGR 186
           R      R
Sbjct: 581 RKQYRTLR 588


>gi|299134180|ref|ZP_07027373.1| tol-pal system protein YbgF [Afipia sp. 1NLS2]
 gi|298590927|gb|EFI51129.1| tol-pal system protein YbgF [Afipia sp. 1NLS2]
          Length = 343

 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/123 (13%), Positives = 32/123 (26%), Gaps = 8/123 (6%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           + K              Y  A      +  +YP  + V    Y +G S  Q         
Sbjct: 218 SPKDEFDLGLGYMQHKDYGLAEETMRNFTVKYPSDRLVGDAQYWLGESLYQR-------- 269

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           +  +   +    +  +Y  S     A   +      L  K+     +     +Y  A   
Sbjct: 270 KKYREAAEAFLAVTSKYDKSAKAPDAMLRLGESLAALKEKDAACAAFGEVMRKYPRASNS 329

Query: 213 FQL 215
            + 
Sbjct: 330 VKQ 332



 Score = 39.7 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 34/93 (36%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G   ++ R+  +   +D       Y       + + + +A E F   +  +  +  A  +
Sbjct: 236 GLAEETMRNFTVKYPSDRLVGDAQYWLGESLYQRKKYREAAEAFLAVTSKYDKSAKAPDA 295

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
           +L       +  +   A +   E + +YP + N
Sbjct: 296 MLRLGESLAALKEKDAACAAFGEVMRKYPRASN 328



 Score = 39.3 bits (91), Expect = 0.54,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 45/125 (36%), Gaps = 22/125 (17%)

Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
           +G+ Y Q         +   L  + M     +Y +   V  A++++              
Sbjct: 225 LGLGYMQ--------HKDYGLAEETMRNFTVKYPSDRLVGDAQYWLGESL---------- 266

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
                +R +Y  A   F  V + Y  +  A +AM RL E+  AL   D A      +  +
Sbjct: 267 ----YQRKKYREAAEAFLAVTSKYDKSAKAPDAMLRLGESLAALKEKDAACAAFGEVMRK 322

Query: 257 YPQGY 261
           YP+  
Sbjct: 323 YPRAS 327



 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/132 (12%), Positives = 44/132 (33%), Gaps = 14/132 (10%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
            S    L +    R  ++ ++  + +++ +++  A E     +  +P   +   +     
Sbjct: 204 PSPSGGLTTAPPTRSPKDEFDLGLGYMQHKDYGLAEETMRNFTVKYPSDRLVGDAQYWLG 263

Query: 102 FVQYSAGKYQQAASLGEEYITQ---YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
              Y   KY++A    E ++     Y +S         +G S A +        +     
Sbjct: 264 ESLYQRKKYREA---AEAFLAVTSKYDKSAKAPDAMLRLGESLAAL--------KEKDAA 312

Query: 159 LQYMSRIVERYT 170
                 ++ +Y 
Sbjct: 313 CAAFGEVMRKYP 324


>gi|170750722|ref|YP_001756982.1| tol-pal system protein YbgF [Methylobacterium radiotolerans JCM
           2831]
 gi|170657244|gb|ACB26299.1| tol-pal system protein YbgF [Methylobacterium radiotolerans JCM
           2831]
          Length = 329

 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 8/98 (8%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +   +A   Y A +Y+QA     ++I  +P    V    Y +G SY    R+        
Sbjct: 205 ADYDAAVELYRAKQYEQAEMGLRQFIQSHPRDNRVAGATYWLGESYLARGRN-------- 256

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
           +   +   ++   Y  S     A   + V  N L A+E
Sbjct: 257 REAAEQFLKVSTDYARSSQAPDAMLKLGVTLNALGARE 294



 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 35/73 (47%)

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
           N++A     +G  YL RG    A  +F  V  +Y+ +  A +AM +L     AL   ++A
Sbjct: 237 NRVAGATYWLGESYLARGRNREAAEQFLKVSTDYARSSQAPDAMLKLGVTLNALGAREQA 296

Query: 247 REVVSLIQERYPQ 259
              ++ +  ++P 
Sbjct: 297 CATLAELDRKFPN 309


>gi|307717906|ref|YP_003873438.1| hypothetical protein STHERM_c01910 [Spirochaeta thermophila DSM
           6192]
 gi|306531631|gb|ADN01165.1| hypothetical protein STHERM_c01910 [Spirochaeta thermophila DSM
           6192]
          Length = 137

 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 33/98 (33%), Gaps = 10/98 (10%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + + A  +   +      G  + +        + +   + E++++A   +   +   A  
Sbjct: 1   MRRTAFLVGVLVITILSTGACKST-----PPEIPEGLSREELFQRAQEAVDRGDEQTALL 55

Query: 79  YFNQCSRDFP---FAGVARKSLLMSAFVQYSAGKYQQA 113
           Y+      +P       A  +    A + Y  G Y +A
Sbjct: 56  YYQTVLERYPDDLEGRAA--AEYEIAHIYYKQGLYGEA 91



 Score = 35.5 bits (81), Expect = 8.4,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 41/112 (36%), Gaps = 15/112 (13%)

Query: 138 GMSYAQMIRDVPY--DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           G+S  ++ +      D+   +  L Y   ++ERY +                  AA E E
Sbjct: 31  GLSREELFQRAQEAVDRGDEQTALLYYQTVLERYPD-----DLEGR--------AAAEYE 77

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
           I   Y K+G Y  A   F  +L+ Y   E     +   V +   L+ + E  
Sbjct: 78  IAHIYYKQGLYGEAKDLFLTILSYYDTQEGTSLPLWIKVLSEKHLSWIQEKE 129


>gi|288926047|ref|ZP_06419976.1| putative TPR domain protein [Prevotella buccae D17]
 gi|288337267|gb|EFC75624.1| putative TPR domain protein [Prevotella buccae D17]
          Length = 1110

 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 24/50 (48%)

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
            + ++ NY D EH ++A   L   Y  + +   A   ++ ++  YP+  W
Sbjct: 612 LRRLVDNYPDFEHLDDAYYHLFLLYSRMGMPTVAESYINKLKRGYPKSRW 661


>gi|119471077|ref|ZP_01613636.1| putative lytic cell-wall binding lipoprotein [Alteromonadales
           bacterium TW-7]
 gi|119445917|gb|EAW27198.1| putative lytic cell-wall binding lipoprotein [Alteromonadales
           bacterium TW-7]
          Length = 623

 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 46/263 (17%), Positives = 85/263 (32%), Gaps = 43/263 (16%)

Query: 22  FALTIF-FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
            A+T+   +++ C        S++ V  + + +    R     A+ +LK  N S+A +Y 
Sbjct: 5   LAITLSALALSGCVTESSYNGSNKPVVKNKINNAGAARTRIALALQYLKTGNNSQA-KY- 62

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV--DYVYYLVG 138
               R   FA    +     A+     G+   A    ++ +   P+  N   +Y  +L G
Sbjct: 63  -NLERAAEFAPNLPEVHYSMAYYYQQVGENPLADRAYQKALDIKPDDPNTLNNYGVFLCG 121

Query: 139 MSYAQMIRDVPYDQRATKLMLQ--YMSRIVERYTN-------SPYVKGARFYVTVGRNQ- 188
                 I +           ++     R+ E Y N           + A  Y     N  
Sbjct: 122 ------IDEYDRATDQFLKAIEIPTYIRVAESYENLALCAIEFDDFENAETYFKQALNHS 175

Query: 189 ---------LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA-EHAEEAMARLVEAYV 238
                    LA        +Y K   Y A       +L  + D    +  A+        
Sbjct: 176 SQRTSTLISLA------ALFYAKSDLYKA-----NDILKKHDDTGRVSSRALMLSYLVKN 224

Query: 239 ALALMDEAREVVSLIQERYPQGY 261
            +  ++EA +V S + + Y    
Sbjct: 225 RMGRIEEAEKVASTLLQTYSTSK 247


>gi|113475260|ref|YP_721321.1| hypothetical protein Tery_1568 [Trichodesmium erythraeum IMS101]
 gi|110166308|gb|ABG50848.1| protein of unknown function DUF323 [Trichodesmium erythraeum
           IMS101]
          Length = 820

 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 71/248 (28%), Gaps = 57/248 (22%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
           ++     + + + +  ++ +  A   FNQ  +  P    A  +      V  + GKY  A
Sbjct: 314 IQNAESYFNQGLKYRNQRKYDLAIAEFNQAIKLNP--KYAE-AYYNRGNVYNTQGKYDLA 370

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
                + I   P+      VY   G+ Y +        Q    L L   ++ ++      
Sbjct: 371 LVDYNQAIKFNPKYTQ---VYNNKGIIYNK--------QGKYDLALAEFNQAIKLNP--K 417

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRY-------------YLKR-------GEYVAAIPRF 213
           Y K       +  N     ++ I  +             Y  R       G+Y  A+  F
Sbjct: 418 YSKVYNNR-GIVYNNQRKYDLAIAEFNQAIKLNPKYAEAYYNRGNIYNNQGKYDLALAEF 476

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV----------VSLIQERYPQGYWA 263
              +                 +AY    L+ + +             + + +      W 
Sbjct: 477 NQAIKFKPKY----------AKAYYNRGLVYKTQRNIERVISDFEKAAKLYKEQQNQRWY 526

Query: 264 RYVETLVK 271
           +     +K
Sbjct: 527 QNSLDKLK 534



 Score = 45.5 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 45/148 (30%), Gaps = 19/148 (12%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKA-YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           + +Y    Y +  ++  +  +  A  +Y         F     +       +    GKY 
Sbjct: 347 NPKYAEAYYNRGNVYNTQGKYDLALVDYNQAIK----FNPKYTQVYNNKGIIYNKQGKYD 402

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            A +   + I   P+      VY   G+ Y          QR   L +   ++ ++    
Sbjct: 403 LALAEFNQAIKLNPKYSK---VYNNRGIVYNN--------QRKYDLAIAEFNQAIKLNP- 450

Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRY 199
             Y   A +      N     ++ +  +
Sbjct: 451 -KYA-EAYYNRGNIYNNQGKYDLALAEF 476


>gi|70607745|ref|YP_256615.1| hypothetical protein Saci_2026 [Sulfolobus acidocaldarius DSM 639]
 gi|68568393|gb|AAY81322.1| conserved TPR domain protein [Sulfolobus acidocaldarius DSM 639]
          Length = 399

 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 44/280 (15%), Positives = 87/280 (31%), Gaps = 57/280 (20%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVY----EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94
               +   Y +       Q + Y     + + +    N+S+A   F++  R  PF   + 
Sbjct: 2   NTNETSKNYDEMGEQNPSQDQGYLYHFNRGLAYFNLNNYSEAIREFDEAIRLNPFHADSH 61

Query: 95  KSLLMSAFVQYSAGK--------YQQAASLGEEYITQYPESKNVDYVYYLVGMS------ 140
               +S      +G         Y++A    +E I   P++    Y +Y  G++      
Sbjct: 62  YYKALSLIALQRSGSVNAGISDLYERAILEFDEAIKIDPKNPE--Y-HYQKGLALEILGR 118

Query: 141 -------YAQMIRDVPY-------------DQRATKLMLQYMSRIVERYTNSP--YVKGA 178
                  Y   I+  P              DQ      +  +   +     +   Y + A
Sbjct: 119 QYEALLEYQDAIKLNPRNPEYYYRKAIILQDQEKYVDAIAEVDTAIRLNPKNSTYYFRKA 178

Query: 179 RF-----YVTVGRNQLAAKEVE----IGRYYLKRGEYVAAIPRFQLVLANYSD----AEH 225
                   +    +QL  K +     +  YY ++G  +  + R+  VL +Y +    + +
Sbjct: 179 LLLKSMGKLKEALDQL-DKAISLNPQVAEYYHQKGLILKELKRYDDVLKDYDNAIKLSPN 237

Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
             E   R    Y  L   ++A   +       P      Y
Sbjct: 238 NPEYHFRKGVLYYELGKYEKAVMELEESVRLNPNNPEYHY 277


>gi|268317778|ref|YP_003291497.1| Tetratricopeptide TPR_2 repeat-containing protein [Rhodothermus
           marinus DSM 4252]
 gi|262335312|gb|ACY49109.1| Tetratricopeptide TPR_2 repeat protein [Rhodothermus marinus DSM
           4252]
          Length = 711

 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/149 (12%), Positives = 42/149 (28%), Gaps = 30/149 (20%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           +      +  + +A + F     + P    A      +       G+  +A    E  + 
Sbjct: 11  EGEDLFLKGAYPQALQTFEAVLEEDPSNPYALN---DAGLAYAELGQLDRAVECFERALQ 67

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
             P  +N           +  +I  +    +   L ++   R  E   +S      +   
Sbjct: 68  ADPGHENA----------FFNLIDQLLRYNQ-FDLAVETFLRYQEAIPDSE-----QKR- 110

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
                     E ++ R    R ++ A + 
Sbjct: 111 --------KYEKDLAR--AARKQWEATLN 129


>gi|315187508|gb|EFU21264.1| putative lipoprotein [Spirochaeta thermophila DSM 6578]
          Length = 137

 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 33/98 (33%), Gaps = 10/98 (10%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + + A  +   +      G  + +        + +   + E++++A   +   +   A  
Sbjct: 1   MRRTAFLVGVLVITILSTGACKST-----PPEIPEGLSREELFQRAQEAVDRGDEQTALL 55

Query: 79  YFNQCSRDFP---FAGVARKSLLMSAFVQYSAGKYQQA 113
           Y+      +P       A  +    A + Y  G Y +A
Sbjct: 56  YYQTVLERYPDDLEGRAA--AEYEIAHIYYKQGLYGEA 91



 Score = 35.9 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 41/112 (36%), Gaps = 15/112 (13%)

Query: 138 GMSYAQMIRDVPY--DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           G+S  ++ +      D+   +  L Y   ++ERY +                  AA E E
Sbjct: 31  GLSREELFQRAQEAVDRGDEQTALLYYQTVLERYPD-----DLEGR--------AAAEYE 77

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
           I   Y K+G Y  A   F  +L+ Y   E     +   V +   L+ + E  
Sbjct: 78  IAHIYYKQGLYGEAKELFLTILSYYDTQEGTSLPLWIKVLSEKHLSWIQEKE 129


>gi|309379699|emb|CBX21688.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 237

 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 42/125 (33%), Gaps = 11/125 (8%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S   V   + +Y +A+   +   FS A               +A++S+ +    +   G 
Sbjct: 111 SAHTVETAQNLYNQALKHYQNGRFSAAAALLKGADGGD-GGSIAQRSMYLLLQSRARMGN 169

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVER 168
            +    +G  Y  ++ +S       + +G    +   +D+                +++ 
Sbjct: 170 CESVIEIGGRYANRFKDSPTAPEAMFKIGECQYRLQQKDIAR---------ATWRSLIQA 220

Query: 169 YTNSP 173
           Y  SP
Sbjct: 221 YPGSP 225



 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 20/52 (38%), Gaps = 7/52 (13%)

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             RF+       D+  A EAM ++ E    L   D AR     + + YP   
Sbjct: 181 ANRFK-------DSPTAPEAMFKIGECQYRLQQKDIARATWRSLIQAYPGSP 225


>gi|297274066|ref|XP_002800721.1| PREDICTED: intraflagellar transport protein 88 homolog [Macaca
           mulatta]
          Length = 805

 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/299 (12%), Positives = 88/299 (29%), Gaps = 56/299 (18%)

Query: 2   SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60
                +A+ I +    +  +       +++  + +G +  Q+S    +   +D      +
Sbjct: 409 QKDYNQAVEILKMLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 468

Query: 61  YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
             K        ++ KA E++      D   +     +L           +  +A      
Sbjct: 469 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 521

Query: 120 YITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKL--------- 157
           ++  +   +N   V Y +   Y              Q++  VP D +             
Sbjct: 522 FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVVPTDPQVLSKLGELYDHEG 581

Query: 158 ----MLQYMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEI 196
                 QY       +               ++ + + A  Y     + +      ++ +
Sbjct: 582 DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMV 641

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
              + + G Y  A+  ++     + +     E +  LV     L L D A+E    ++ 
Sbjct: 642 ASCFRRSGNYQKALDTYKDTHRKFPE---NVECLRFLVRLCTDLGLKD-AQEYARKLKR 696



 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 66/222 (29%), Gaps = 67/222 (30%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117
            KAV +L+++++++A E      +    + V   +    + + Y    + QA+S      
Sbjct: 401 NKAVTYLRQKDYNQAVEILKMLEKKD--SRVKSAAATNLSALYYMGKDFAQASSYADIAV 458

Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147
             + Y    P    +K      N DY                     Y +G++Y ++ R 
Sbjct: 459 NSDRY---NPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNR- 514

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
                      L    ++     NS                 A    +I   Y       
Sbjct: 515 -------LDEALDCFLKLHAILRNS-----------------AEVLYQIANIYELMENPS 550

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
            AI     V++           +++L E Y       +A + 
Sbjct: 551 QAIEWLMQVVSVVPTDPQV---LSKLGELYDHEGDKSQAFQY 589


>gi|291563222|emb|CBL42038.1| ChAPs (Chs5p-Arf1p-binding proteins) [butyrate-producing bacterium
           SS3/4]
          Length = 627

 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 42/101 (41%), Gaps = 3/101 (2%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K+ L +  ++ +C   G +  S  D    +         +Y++   ++ E+++  A E
Sbjct: 1   MRKWFLIMATAVVLCSACGKKDASVNDATQAAQASSTEAENLYKEGSQYVGEEDYESAIE 60

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
              +C    P    + K+ +  +       +Y +A S+ ++
Sbjct: 61  SLLKCIELDP--DYS-KAYIQLSKAYIGNEEYDEAMSILQQ 98


>gi|298506099|gb|ADI84822.1| TPR domain lipoprotein [Geobacter sulfurreducens KN400]
          Length = 896

 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 49/296 (16%), Positives = 85/296 (28%), Gaps = 88/296 (29%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +  +     + +  L G   +S              + E+Y + V  L+E N   A  
Sbjct: 1   MSRSFIITGLVVLMFTLSGCGGKS--------------RDELYTEGVKLLQEGNPGGAVV 46

Query: 79  YFN-QCSRDFPF--------------AGVARKSL-----------------LMSAFVQYS 106
            F     +D  F                   ++                  L  A +  S
Sbjct: 47  LFKSALEKDQNFQDARYQLAKAYQALGKY-EQAEKEYLKVLKQNPSKTDIVLELAKLYNS 105

Query: 107 AGKYQQAASLGEEYITQYPESKNV------DYVYYLVGM---SYAQMIRDVPYDQRATKL 157
             K  QA     +Y+   P S          Y   L GM   +    +  +  + R T  
Sbjct: 106 QRKPDQAVEQAGKYLQSNPGSAEALEVLGLGYA--LKGMPAEAERNFLLALEKEPRRTSA 163

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVG----------RNQLAAKEVEIGRYYLKRGEYV 207
            LQ    ++E+   S   K AR  +              N LA+ E+ +G          
Sbjct: 164 KLQLAVLLMEQ--KSSREKEARALIDEILTADPGNVKAHNLLASYELSLG---------- 211

Query: 208 AAIPRFQLVLANYSD----AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
               R +  L  Y             + R     +    MD+A +    + +++PQ
Sbjct: 212 ---NR-EQALEIYRKVAALTPGDPAPLYRQGVILLEKGEMDKAEKTAETLVQKFPQ 263



 Score = 38.6 bits (89), Expect = 0.90,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 59/189 (31%), Gaps = 35/189 (18%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
              +Y + V+ L++    KA +      + FP    +  + L      Y    Y  A + 
Sbjct: 231 PAPLYRQGVILLEKGEMDKAEKTAETLVQKFP--QKSEGARLKGLIA-YQRKNYADAITA 287

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            +  +   P  +      Y +G+S               +  L    RI++   +     
Sbjct: 288 LQTSVKIAPSLEG----LYYLGLSMYSR--------GELENALSQFRRILDHTPDF---- 331

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
             +  +      L  K         +  + +A   R    +    D+  A  A   L  A
Sbjct: 332 -VQARLLTALILLNQK---------RVDDAIAEANRA---IET--DSRSAL-ARNILGSA 375

Query: 237 YVALALMDE 245
           Y+A  + DE
Sbjct: 376 YLAKGMYDE 384


>gi|163758788|ref|ZP_02165875.1| hypothetical protein HPDFL43_15232 [Hoeflea phototrophica DFL-43]
 gi|162284078|gb|EDQ34362.1| hypothetical protein HPDFL43_15232 [Hoeflea phototrophica DFL-43]
          Length = 320

 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 46/124 (37%), Gaps = 14/124 (11%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
               +    ++Y+     +   +++ A + F      +P  G A  ++      QYS G+
Sbjct: 189 QTASLNSPDDLYQAGYNHMLTGDYALAEQVFGDYIAAYPEGGRAADAMFWLGEAQYSQGR 248

Query: 110 YQQAASLGEEYI---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
           YQ      + ++    +YP++         +GMS A++           +     +  ++
Sbjct: 249 YQD---SAKTFLDVHKKYPQADKGADSLLKLGMSLAKLDNR--------ETACATLREVL 297

Query: 167 ERYT 170
            RY 
Sbjct: 298 IRYP 301


>gi|321443948|gb|EFX60242.1| hypothetical protein DAPPUDRAFT_124876 [Daphnia pulex]
          Length = 389

 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 64/186 (34%), Gaps = 18/186 (9%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAG 108
               +     +E+A   +   + + A   F +   D PF  + VA  + L  A +  S  
Sbjct: 175 PATPQAPFAAFERANCLVDMNDPNGAINEFAKFKAD-PFRQSPVAPLAYLRLATLLRSQN 233

Query: 109 KYQQAASLGEE----YITQYPESKN----VDYVYYLVGMSYAQMIRDVP--YDQRATKLM 158
           K  +AA+  +E    +                + Y  GM+  ++ +  P   D       
Sbjct: 234 KPAEAAAALQEGRTHFEASLAADPARAGWAPLMQYHHGMALKELAKKDPAKLDVAKLTEA 293

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRN-----QLAAKEVEIGRYYLKRGEYVAAIPRF 213
                 + +++ NSP    A +     R      +LAA  + + R   K  E  AA  + 
Sbjct: 294 RAQFDGLKQKFPNSPEAPDAAWRSGQCRREEHAPRLAAARLVLARTDAKPEEIAAATTQL 353

Query: 214 QLVLAN 219
           Q  +  
Sbjct: 354 QDAVKQ 359


>gi|322420010|ref|YP_004199233.1| lytic transglycosylase catalytic subunit [Geobacter sp. M18]
 gi|320126397|gb|ADW13957.1| Lytic transglycosylase catalytic [Geobacter sp. M18]
          Length = 706

 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 57/161 (35%), Gaps = 8/161 (4%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
           +    IA   L  WE  +++         +     +Y + +   K Q   +A     +  
Sbjct: 61  SFMTGIAAAKLEQWEEAAAQLPAAAEGYPLLADYALYYQGLSLSKLQRHDQALPPLYKLL 120

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
           +D+P + +AR++L++ A    +AG  ++A      ++ +YP   +     Y   +   ++
Sbjct: 121 KDYPGSRLARQALILYADSLAAAGYPKEAQQSYATFVERYPSGGDSISALYGSALCREKL 180

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
                            +  I   Y  SP+   A   +   
Sbjct: 181 --------GEAAAAAAILRNIYLIYPASPFADKAALELQNL 213



 Score = 38.6 bits (89), Expect = 0.87,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 46/137 (33%), Gaps = 22/137 (16%)

Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
            DY  Y  G+S +++ R   +DQ      L  + ++++ Y  S   + A   + +  + L
Sbjct: 92  ADYALYYQGLSLSKLQR---HDQ-----ALPPLYKLLKDYPGSRLARQA---LILYADSL 140

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           AA            G    A   +   +  Y     +  A+         L     A  +
Sbjct: 141 AA-----------AGYPKEAQQSYATFVERYPSGGDSISALYGSALCREKLGEAAAAAAI 189

Query: 250 VSLIQERYPQGYWARYV 266
           +  I   YP   +A   
Sbjct: 190 LRNIYLIYPASPFADKA 206


>gi|222100626|ref|YP_002535194.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga neapolitana DSM
           4359]
 gi|221573016|gb|ACM23828.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga neapolitana DSM
           4359]
          Length = 379

 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 28/89 (31%), Gaps = 24/89 (26%)

Query: 100 SAFVQYSAGKYQQAASLGEEY------ITQYPESKNV---DYVYYLVGMSYAQMIRDVPY 150
             ++ Y   +Y +A      +      I      +NV   D VYY   +SY         
Sbjct: 300 LGYMFYLRREYDEAI---RRFDLAIEEI----GEENVYFKDDVYYYRALSYYFK------ 346

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGAR 179
                    +     +E++ +S Y   A 
Sbjct: 347 --GDLSTARRLFEDFIEKFPDSEYTDDAE 373



 Score = 40.5 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 13/80 (16%)

Query: 199 YYLKRGEYVAAIPRFQLVLAN-------YSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
           +YL+R  Y  AI RF L +         + D  +   A+     +Y     +  AR +  
Sbjct: 304 FYLRRE-YDEAIRRFDLAIEEIGEENVYFKDDVYYYRAL-----SYYFKGDLSTARRLFE 357

Query: 252 LIQERYPQGYWARYVETLVK 271
              E++P   +    E  +K
Sbjct: 358 DFIEKFPDSEYTDDAEYFLK 377



 Score = 35.9 bits (82), Expect = 5.7,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 35/107 (32%), Gaps = 2/107 (1%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN-QCSRDFPF 89
           A+  +   E   S        + +   + ++    +F   + + +A   F+         
Sbjct: 268 ALSTISTRESTPSVVYVPSKESRIERAKSLWFLGYMFYLRREYDEAIRRFDLAIEEIGEE 327

Query: 90  AGV-ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
                       A   Y  G    A  L E++I ++P+S+  D   Y
Sbjct: 328 NVYFKDDVYYYRALSYYFKGDLSTARRLFEDFIEKFPDSEYTDDAEY 374


>gi|156543124|ref|XP_001605583.1| PREDICTED: similar to tpr repeat nuclear phosphoprotein [Nasonia
           vitripennis]
          Length = 1215

 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 40/275 (14%), Positives = 94/275 (34%), Gaps = 33/275 (12%)

Query: 1   MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
           ++  L R+    E         A+T  +++A  +        +  +Y + + +     + 
Sbjct: 483 LTESLERSKADAEHHPSYYNSIAVTTTYNLARVYEAQCMFDKAEKLYKNVLKEHPNYIDC 542

Query: 61  YEK-AVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           Y +   +   +    +A ++F    +   + P    +    L  A       ++      
Sbjct: 543 YLRLGCMARDKGQIYEASDWFKDALRIDNEHP-DAWSLLGNLHLA-----KQEWGPGQKK 596

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ----RATKLMLQYMSRIVERYTNS 172
            E  I + P + N  Y    +G  + Q +     D+    R     +     ++     +
Sbjct: 597 FER-ILRNPSTNNDAYSLIALGNIWLQTMHQSGKDKDKEKRHQDRAMANYKLVLRNDPKN 655

Query: 173 PYVKGA-------RFYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQL 215
            +           + Y+   R+  A  +E         + I   Y+++ +YV+AI  ++ 
Sbjct: 656 IWATNGVGCLLAHKGYMNEARDIFAQVREATSELPDVWLNIAHVYVEQKQYVSAIQMYEN 715

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
            L  +    H  E +  L  AY+    + EA+  +
Sbjct: 716 CLRKFYKYHHV-EILGYLARAYLKAGKLKEAKLTL 749


>gi|330828309|ref|YP_004391261.1| TPR domain-containing protein [Aeromonas veronii B565]
 gi|328803445|gb|AEB48644.1| TPR domain protein [Aeromonas veronii B565]
          Length = 263

 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 42/130 (32%), Gaps = 22/130 (16%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               Y +A    + +I QYP S  V   +Y +G                        S +
Sbjct: 155 KEKNYDKAIPAFQGFIKQYPNSGYVPNAHYWLGQLLFNKGDRAG--------ASAQFSTV 206

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
             +Y+ SP    A   + +   QL  K+ E   +Y             + V+  Y +   
Sbjct: 207 ANKYSKSPKRADALLKLGML-AQLDGKKTEAKSFY-------------EQVIKGYPNTSP 252

Query: 226 AEEAMARLVE 235
           A+ A   L +
Sbjct: 253 AQLAKQSLAK 262



 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 51/132 (38%), Gaps = 9/132 (6%)

Query: 55  RYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
           + + + Y+ AV   LKE+N+ KA   F    + +P +G    +      + ++ G    A
Sbjct: 140 QDENQAYDAAVNMVLKEKNYDKAIPAFQGFIKQYPNSGYVPNAHYWLGQLLFNKGDRAGA 199

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
           ++       +Y +S         +GM           D + T     +  ++++ Y N+ 
Sbjct: 200 SAQFSTVANKYSKSPKRADALLKLGM-------LAQLDGKKT-EAKSFYEQVIKGYPNTS 251

Query: 174 YVKGARFYVTVG 185
             + A+  +   
Sbjct: 252 PAQLAKQSLAKL 263


>gi|315126278|ref|YP_004068281.1| prenylyltransferase domain-containing protein [Pseudoalteromonas
           sp. SM9913]
 gi|315014792|gb|ADT68130.1| prenylyltransferase domain-containing protein [Pseudoalteromonas
           sp. SM9913]
          Length = 250

 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 45/130 (34%), Gaps = 21/130 (16%)

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
           Y   ++     +            +      +  Y NS Y   A +++            
Sbjct: 134 YERAVALIMKDKRYD-------QAIPEFQAFLTTYPNSVYTSNAHYWLGQLLTI------ 180

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
                   + + V A   F++V+  + ++    +AM +L        L  EA+++++ + 
Sbjct: 181 --------KNDGVKAAEHFKVVVNEFPNSNKRPDAMLKLGTLLQEQGLKAEAQKILNELI 232

Query: 255 ERYPQGYWAR 264
            +YP    A+
Sbjct: 233 NQYPSTTAAK 242



 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 47/141 (33%), Gaps = 23/141 (16%)

Query: 50  SVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           S +    + E YE+AV   +K++ + +A   F      +P +              Y  G
Sbjct: 123 SYSSDLSENEAYERAVALIMKDKRYDQAIPEFQAFLTTYPNSVYTSN-------AHYWLG 175

Query: 109 KY----QQAASLGEEY---ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           +            E +   + ++P S         +G         +  +Q       + 
Sbjct: 176 QLLTIKNDGVKAAEHFKVVVNEFPNSNKRPDAMLKLG--------TLLQEQGLKAEAQKI 227

Query: 162 MSRIVERYTNSPYVKGARFYV 182
           ++ ++ +Y ++   K A   +
Sbjct: 228 LNELINQYPSTTAAKLATERL 248


>gi|300867207|ref|ZP_07111870.1| Lytic transglycosylase, catalytic [Oscillatoria sp. PCC 6506]
 gi|300334821|emb|CBN57036.1| Lytic transglycosylase, catalytic [Oscillatoria sp. PCC 6506]
          Length = 725

 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/264 (12%), Positives = 74/264 (28%), Gaps = 61/264 (23%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
            +  L   ER    +               Y  A   + +   +KA     +  +D+P  
Sbjct: 54  TLVSLSPIERSQKLEAIAQQPQSKARSEARYLLAKDLMAKGEAAKALTLLERLEQDYP-- 111

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
            +A   +++ A    +AG+  +A +  ++ + +Y          Y++G +          
Sbjct: 112 ILASHIVMLRAQAYEAAGEAGKAENTWQDLLKRYENDPVAAEALYILGKTQ--------- 162

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKG-ARFYVT------VGRNQLAAKEVEIGRY---- 199
                          + ++ + P     AR  +            +A   + +  Y    
Sbjct: 163 -PEHWDKA-------IAQFPSHPRTIEMARSRLKTNPNQPELLLLIAKHGLYLKDYGSIV 214

Query: 200 ----------------------YLKRGEY-VAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                                 Y ++ +Y  AAI         Y+ +      + R    
Sbjct: 215 ETLAQKYSAFLKPEDWEAIAFGYWEKQDYGKAAIA--------YAKSPRTPRNLYRKARG 266

Query: 237 YVALALMDEAREVVSLIQERYPQG 260
                 + E++     +   +P G
Sbjct: 267 LWLDGKIPESKIAYKQLITEFPDG 290



 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 80/228 (35%), Gaps = 31/228 (13%)

Query: 38  WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKS 96
           WE+Q      +      R  R +Y KA     +    ++   + Q   +FP         
Sbjct: 238 WEKQDYGKAAIAYAKSPRTPRNLYRKARGLWLDGKIPESKIAYKQLITEFPDGGEDTALG 297

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD-QRAT 155
           L+  +       + ++A    +  I+++P+                 + +    D Q + 
Sbjct: 298 LIRIS----RLSEPKEALVYLDRAISKFPD--RAPEAL---------LDKSKILDKQGSE 342

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           KL  Q    ++++Y NS     A   +     Q AA          K G    A  + + 
Sbjct: 343 KLASQTRQLLLQKYNNS----DAAAELRWTIAQQAA----------KAGNLKIAWQQARD 388

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
           +  N  D+  A EA   + +    +   ++A++       RYP+ Y+A
Sbjct: 389 ITNNNPDSILAPEAAFWVGKWAQRIGRQEDAQKAFEYTIARYPESYFA 436


>gi|298252040|ref|ZP_06975843.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297546632|gb|EFH80500.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 1170

 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 49/167 (29%), Gaps = 48/167 (28%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ-----YSAGKYQQAASL 116
            +A    +   + +A   + +  R  P             +       +  G+Y++A + 
Sbjct: 340 NRANSLNELGKYEEALATYEEVIRLDPNGA--------RIYSNKGSVLFQLGRYEEAVAA 391

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            EE+I   PES      Y+  G +   + R         +  L    + +          
Sbjct: 392 FEEHIRLDPESPE---AYFNKGKTLIALDR--------PEEALAMFEQALWLDP------ 434

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
                                R Y  +G  + A+ R++  L  +  +
Sbjct: 435 ------------------YDARKYYHKGNMLMALKRYEEALVVFEQS 463


>gi|294054026|ref|YP_003547684.1| hypothetical protein Caka_0489 [Coraliomargarita akajimensis DSM
           45221]
 gi|293613359|gb|ADE53514.1| hypothetical protein Caka_0489 [Coraliomargarita akajimensis DSM
           45221]
          Length = 1026

 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 68/190 (35%), Gaps = 28/190 (14%)

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK---NV 130
             A +   +      +    ++ ++    + + A  Y++  +LG  +I ++P  +   NV
Sbjct: 374 KDAIDLGERYLATDNYKSYRKEVIVKLVALYFQAEDYEKLYALGSSFIDEHPGHEYGNNV 433

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
              +++ G ++ +  +         +   + +   ++ Y  +P  + A +++ +G     
Sbjct: 434 --AHFM-GFAWMRENK--------IEEARKVLGGYLQSYPVAPLSQAANYWLGLGNVI-- 480

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
            +E E            AA   F  ++  Y +     EA  R       +   + A    
Sbjct: 481 EQEFE------------AAAANFDHIIERYPEGSFIAEARFRRAVCDFGMGDYEAAETGF 528

Query: 251 SLIQERYPQG 260
           +     YPQ 
Sbjct: 529 TEWVASYPQN 538



 Score = 43.2 bits (101), Expect = 0.037,   Method: Composition-based stats.
 Identities = 27/204 (13%), Positives = 67/204 (32%), Gaps = 31/204 (15%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              +++E    +A +      + +P A +++ +            +++ AA+  +  I +
Sbjct: 438 GFAWMRENKIEEARKVLGGYLQSYPVAPLSQAANYWLGLGNVIEQEFEAAAANFDHIIER 497

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR---- 179
           YPE   +    +   +    M           +      +  V  Y  +     A     
Sbjct: 498 YPEGSFIAEARFRRAVCDFGM--------GDYEAAETGFTEWVASYPQNHLRGEAEVFLG 549

Query: 180 ------FYVTVGRNQLAAKEVEIGRYYLKRGEY------VAAIPRFQLVL-------ANY 220
                   V       A+ E   G+  L    Y      + A  R++ ++        +Y
Sbjct: 550 DIDAYYAAVAESLQHYASVESYTGKMNLINHAYFESARLLDANERYEAMIQLLQQYMDHY 609

Query: 221 SDAEHAEEAMARLVEAYVALALMD 244
            +  +  +A+ ++ +AY +L   +
Sbjct: 610 QETGNLTQAILQIGQAYESLGQPE 633



 Score = 39.3 bits (91), Expect = 0.52,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 47/158 (29%), Gaps = 25/158 (15%)

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
             A  + L              A+   +  +T +PES      YY         + +   
Sbjct: 825 PYASPATLAWIGESMLHKDPALASLAIDRVLTDHPESLAAPSAYYTK-----SKMLEAEK 879

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
           D  A    +Q +  I ER+   P              QL               +Y  AI
Sbjct: 880 DITA---AIQVLDFIAERFPTWPQAPEVTLRAATLTAQL--------------NDYPKAI 922

Query: 211 PRFQLV--LANYSDAEHAEEAMARLVEAYVALALMDEA 246
            R+  V  + ++   E   EA  R+   Y A     +A
Sbjct: 923 ERYLSVLQVRDWRG-EAWAEACFRIATCYEATGDTLKA 959


>gi|316932668|ref|YP_004107650.1| tol-pal system protein YbgF [Rhodopseudomonas palustris DX-1]
 gi|315600382|gb|ADU42917.1| tol-pal system protein YbgF [Rhodopseudomonas palustris DX-1]
          Length = 342

 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/97 (12%), Positives = 27/97 (27%), Gaps = 8/97 (8%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
                        Y  A      +  +YP++       Y +G S+ Q         +  +
Sbjct: 221 EFDLGIGYMQRRDYALAEETMRNFAQKYPDNPLTADAQYWLGESFFQR--------QMYR 272

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
              +    +  ++  +     A   +    + L  KE
Sbjct: 273 DAAEAFLAVTSKHEKAGKAPDALLRLGQSLSALKEKE 309



 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 45/110 (40%), Gaps = 14/110 (12%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           +R   L  + M    ++Y ++P    A++++              G  + +R  Y  A  
Sbjct: 231 RRDYALAEETMRNFAQKYPDNPLTADAQYWL--------------GESFFQRQMYRDAAE 276

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            F  V + +  A  A +A+ RL ++  AL   + A   +  I  +YPQ  
Sbjct: 277 AFLAVTSKHEKAGKAPDALLRLGQSLSALKEKEAACAALGEIGRKYPQAS 326



 Score = 35.9 bits (82), Expect = 5.8,   Method: Composition-based stats.
 Identities = 16/138 (11%), Positives = 48/138 (34%), Gaps = 15/138 (10%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           L ++   +  R+ ++  + +++ ++++ A E     ++ +P   +   +        +  
Sbjct: 209 LTTLPPSQTPRDEFDLGIGYMQRRDYALAEETMRNFAQKYPDNPLTADAQYWLGESFFQR 268

Query: 108 GKYQQAASLGEEYITQYPESK---NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
             Y+ A    E ++    + +           +G S + +        +  +     +  
Sbjct: 269 QMYRDA---AEAFLAVTSKHEKAGKAPDALLRLGQSLSAL--------KEKEAACAALGE 317

Query: 165 IVERYTN-SPYVKGARFY 181
           I  +Y   S  VK A   
Sbjct: 318 IGRKYPQASSGVKKAVDR 335


>gi|119628671|gb|EAX08266.1| intraflagellar transport 88 homolog (Chlamydomonas), isoform CRA_a
           [Homo sapiens]
          Length = 796

 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/299 (11%), Positives = 88/299 (29%), Gaps = 56/299 (18%)

Query: 2   SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60
                +A+ I +    +  +       +++  + +G +  Q+S    +   +D      +
Sbjct: 437 QKDYNQAVEILKVLEKKDNRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 496

Query: 61  YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
             K        ++ KA E++      D   +     +L           +  +A      
Sbjct: 497 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 549

Query: 120 YITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKL--------- 157
           ++  +   +N   V Y +   Y              Q++  +P D +             
Sbjct: 550 FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREG 609

Query: 158 ----MLQYMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEI 196
                 QY       +               ++ + + A  Y     + +      ++ +
Sbjct: 610 DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMV 669

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
              + + G Y  A+  ++     + +     E +  LV     L L D A+E    ++ 
Sbjct: 670 ASCFRRSGNYQKALDTYKDTHRKFPE---NVECLRFLVRLCTDLGLKD-AQEYARKLKR 724



 Score = 35.5 bits (81), Expect = 7.6,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 65/222 (29%), Gaps = 67/222 (30%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117
            KAV +L+++++++A E      +      V   +    + + Y    + QA+S      
Sbjct: 429 NKAVTYLRQKDYNQAVEILKVLEKKD--NRVKSAAATNLSALYYMGKDFAQASSYADIAV 486

Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147
             + Y    P    +K      N DY                     Y +G++Y ++ R 
Sbjct: 487 NSDRY---NPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNR- 542

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
                      L    ++     NS                 A    +I   Y       
Sbjct: 543 -------LDEALDCFLKLHAILRNS-----------------AEVLYQIANIYELMENPS 578

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
            AI     V++           +++L E Y       +A + 
Sbjct: 579 QAIEWLMQVVSVIPTDPQV---LSKLGELYDREGDKSQAFQY 617


>gi|2407639|gb|AAB70574.1| protein phosphatase 5 [Xenopus laevis]
          Length = 492

 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 43/147 (29%), Gaps = 25/147 (17%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKY 110
             +   E+ E+A  + + +++  A +Y+ Q     P        +SL            Y
Sbjct: 17  KEKTAEELKEQANEYFRVKDYDHAVQYYTQAIDLSPDTAIYYGNRSL-----AYLRTECY 71

Query: 111 QQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
             A +     I       +  Y+  YY    S   +           K  L+    +V+ 
Sbjct: 72  GYALADASRAIQL-----DAKYIKGYYRRAASNMAL--------GKLKAALKDYETVVKV 118

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVE 195
             +      A+         +  K  E
Sbjct: 119 RPHDK---DAQMKFQECNKLVRQKAFE 142


>gi|86748939|ref|YP_485435.1| hypothetical protein RPB_1816 [Rhodopseudomonas palustris HaA2]
 gi|86571967|gb|ABD06524.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
          Length = 321

 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 34/119 (28%), Gaps = 14/119 (11%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           + +              Y  A      + ++YP         Y +G S+ Q         
Sbjct: 196 SPRDEFDLGIGYMQRRDYALAEETMRNFASKYPNDALTPDSQYWLGESFFQR-------- 247

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV------EIGRYYLKRGE 205
           +  +   +    +  +Y  S     A   +    + L  KE       EIGR Y K   
Sbjct: 248 QMYRDAAEAFLAVTSKYDKSAKAPDALLRLGQSLSALKEKEAACAALGEIGRKYPKASA 306



 Score = 42.4 bits (99), Expect = 0.074,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 42/110 (38%), Gaps = 14/110 (12%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           +R   L  + M     +Y N      +++++              G  + +R  Y  A  
Sbjct: 210 RRDYALAEETMRNFASKYPNDALTPDSQYWL--------------GESFFQRQMYRDAAE 255

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            F  V + Y  +  A +A+ RL ++  AL   + A   +  I  +YP+  
Sbjct: 256 AFLAVTSKYDKSAKAPDALLRLGQSLSALKEKEAACAALGEIGRKYPKAS 305


>gi|83814577|ref|YP_446180.1| TPR repeat-containing protein [Salinibacter ruber DSM 13855]
 gi|83755971|gb|ABC44084.1| tetratricopeptide repeat domain protein [Salinibacter ruber DSM
           13855]
          Length = 564

 Score = 46.3 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 40/100 (40%), Gaps = 1/100 (1%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
              F   +   +G    S+     ++++++     ++E+ V   +   ++ A+E F +  
Sbjct: 9   VCVFGFLLLLSIGMPGTSAHAQQAEAISEIENAELLFEEGVAAFERGEYATAHERF-RLV 67

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
            ++        +LLM        G+Y+ A    E  + QY
Sbjct: 68  SEYALNRKTTAALLMDGKALVQLGRYRDAIGRLEALLNQY 107


>gi|148232878|ref|NP_001081698.1| protein phosphatase 5, catalytic subunit [Xenopus laevis]
 gi|49117057|gb|AAH73033.1| PP5 protein [Xenopus laevis]
          Length = 493

 Score = 45.9 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 43/147 (29%), Gaps = 25/147 (17%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKY 110
             +   E+ E+A  + + +++  A +Y+ Q     P        +SL            Y
Sbjct: 18  KEKTAEELKEQANEYFRVKDYDHAVQYYTQAIDLSPDTAIYYGNRSL-----AYLRTECY 72

Query: 111 QQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
             A +     I       +  Y+  YY    S   +           K  L+    +V+ 
Sbjct: 73  GYALADASRAIQL-----DAKYIKGYYRRAASNMAL--------GKLKAALKDYETVVKV 119

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVE 195
             +      A+         +  K  E
Sbjct: 120 RPHDK---DAQMKFQECNKLVRQKAFE 143


>gi|300023925|ref|YP_003756536.1| tol-pal system protein YbgF [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299525746|gb|ADJ24215.1| tol-pal system protein YbgF [Hyphomicrobium denitrificans ATCC
           51888]
          Length = 333

 Score = 45.9 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 39/107 (36%), Gaps = 14/107 (13%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           QR         +  ++++ N      A++++              G  +  RG+Y AA  
Sbjct: 221 QRDYGAAETSFTEFLKKFPNDSLSGNAQYWL--------------GETHFVRGQYKAAAS 266

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
            F      Y+    A +++ +L  +   L   D A    + +  ++P
Sbjct: 267 AFLKGYQTYAQGAKAPDSLLKLAMSLDRLGQKDAACSSFAELATKFP 313



 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 49/135 (36%), Gaps = 14/135 (10%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
            +       +++YE+A  +L ++++  A   F +  + FP   ++  +        +  G
Sbjct: 200 PASESSNDPKQLYEQAYGYLLQRDYGAAETSFTEFLKKFPNDSLSGNAQYWLGETHFVRG 259

Query: 109 KYQQAASLGEEYIT---QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
           +Y+ AAS    ++     Y +          + MS  ++       Q+         + +
Sbjct: 260 QYKAAASA---FLKGYQTYAQGAKAPDSLLKLAMSLDRL------GQKDA--ACSSFAEL 308

Query: 166 VERYTNSPYVKGARF 180
             ++  +P     R 
Sbjct: 309 ATKFPTAPKSVKTRA 323


>gi|28329439|ref|NP_006522.2| intraflagellar transport protein 88 homolog isoform 2 [Homo
           sapiens]
 gi|122889169|emb|CAM13405.1| intraflagellar transport 88 homolog (Chlamydomonas) [Homo sapiens]
 gi|123233609|emb|CAM20430.1| intraflagellar transport 88 homolog (Chlamydomonas) [Homo sapiens]
          Length = 824

 Score = 45.9 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/299 (11%), Positives = 88/299 (29%), Gaps = 56/299 (18%)

Query: 2   SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60
                +A+ I +    +  +       +++  + +G +  Q+S    +   +D      +
Sbjct: 428 QKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 487

Query: 61  YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
             K        ++ KA E++      D   +     +L           +  +A      
Sbjct: 488 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 540

Query: 120 YITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKL--------- 157
           ++  +   +N   V Y +   Y              Q++  +P D +             
Sbjct: 541 FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREG 600

Query: 158 ----MLQYMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEI 196
                 QY       +               ++ + + A  Y     + +      ++ +
Sbjct: 601 DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMV 660

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
              + + G Y  A+  ++     + +     E +  LV     L L D A+E    ++ 
Sbjct: 661 ASCFRRSGNYQKALDTYKDTHRKFPE---NVECLRFLVRLCTDLGLKD-AQEYARKLKR 715



 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 66/222 (29%), Gaps = 67/222 (30%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117
            KAV +L+++++++A E      +    + V   +    + + Y    + QA+S      
Sbjct: 420 NKAVTYLRQKDYNQAVEILKVLEKKD--SRVKSAAATNLSALYYMGKDFAQASSYADIAV 477

Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147
             + Y    P    +K      N DY                     Y +G++Y ++ R 
Sbjct: 478 NSDRY---NPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNR- 533

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
                      L    ++     NS                 A    +I   Y       
Sbjct: 534 -------LDEALDCFLKLHAILRNS-----------------AEVLYQIANIYELMENPS 569

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
            AI     V++           +++L E Y       +A + 
Sbjct: 570 QAIEWLMQVVSVIPTDPQV---LSKLGELYDREGDKSQAFQY 608


>gi|312143614|ref|YP_003995060.1| Tetratricopeptide TPR_1 repeat-containing protein [Halanaerobium
           sp. 'sapolanicus']
 gi|311904265|gb|ADQ14706.1| Tetratricopeptide TPR_1 repeat-containing protein [Halanaerobium
           sp. 'sapolanicus']
          Length = 391

 Score = 45.9 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 76/233 (32%), Gaps = 42/233 (18%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
           R+++ D+Y + + D     +    A L+ +  + +KA E + Q         V +   L 
Sbjct: 158 RENAADIYQEIIDDNPIAEDYLNLAKLYEENGDLNKAVELYEQALAK---GTVQQSIYLN 214

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
              +    G Y  A S+ E  I   P    V Y  Y+        + +    + A    +
Sbjct: 215 LGNLYQRLGNYNSAISIYELGIKANPN--FVPY--YVKIAENYLALDNFSNAEDALIKAI 270

Query: 160 Q--------------------YMSRIVERYTNS-PYVKGARFYVTVGRNQLAAKEVEIGR 198
                                   + +  Y+NS  Y              LA      G+
Sbjct: 271 DINRNSYHAYYLLGVIAQERKDYEQALNYYSNSLTYNPD------YVNAYLAE-----GK 319

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
            YL++ EY  AI  F   +    +     E+   L  AY    +M+ AR  + 
Sbjct: 320 LYLEKEEYNNAISSFLQAVEKNPE---FFESRYYLGLAYYHANMMEAARAELR 369


>gi|298735702|ref|YP_003728227.1| paralysed flagella protein [Helicobacter pylori B8]
 gi|298354891|emb|CBI65763.1| paralysed flagella protein [Helicobacter pylori B8]
          Length = 801

 Score = 45.9 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 49/137 (35%), Gaps = 9/137 (6%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             +T   Y    Y +A   +  Q +  A    ++  +++P     +   L+        G
Sbjct: 186 PLLTTKGYDLNAYLEAKKQIDSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIALGQLG 245

Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            K      +G ++I  YP   N+    Y V  +  +            K  ++Y  RI+ 
Sbjct: 246 IKKSLLIDIGTKWIKNYPTDPNIPEALYYVAKALDEN--------NNYKQAMRYYKRILL 297

Query: 168 RYTNSPYVKGARFYVTV 184
            Y NS Y   A+  + +
Sbjct: 298 EYKNSRYAPLAQMRLAI 314



 Score = 43.2 bits (101), Expect = 0.041,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 31/99 (31%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
             + RA   +    ++   + L I     +                +  TD      +Y 
Sbjct: 215 RTISRAFKNYPQTIFKKDLYLLEIIALGQLGIKKSLLIDIGTKWIKNYPTDPNIPEALYY 274

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
            A    +  N+ +A  Y+ +   ++  +  A  + +  A
Sbjct: 275 VAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRLA 313



 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 16/47 (34%)

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
           + NY    +  EA+  + +A        +A      I   Y    +A
Sbjct: 259 IKNYPTDPNIPEALYYVAKALDENNNYKQAMRYYKRILLEYKNSRYA 305


>gi|145492571|ref|XP_001432283.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124399393|emb|CAK64886.1| unnamed protein product [Paramecium tetraurelia]
          Length = 457

 Score = 45.9 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/124 (13%), Positives = 41/124 (33%), Gaps = 14/124 (11%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
              +   ++ +K + F+ +  F +A + F++  +  P      ++        +    + 
Sbjct: 151 EKAKLSAKILKKGLDFMHKDQFQEAIKQFDELIKINP---HTFQAYFEKGNALFYLLDFD 207

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           QA    ++ I       N D  Y L G + ++        Q  T   +    R +     
Sbjct: 208 QALWCAKKAIDI---DPNSDSAYNLQGAALSE--------QGNTDQAINSFQRAININPK 256

Query: 172 SPYV 175
           +   
Sbjct: 257 NSEA 260


>gi|119628675|gb|EAX08270.1| intraflagellar transport 88 homolog (Chlamydomonas), isoform CRA_e
           [Homo sapiens]
          Length = 824

 Score = 45.9 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/299 (11%), Positives = 88/299 (29%), Gaps = 56/299 (18%)

Query: 2   SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60
                +A+ I +    +  +       +++  + +G +  Q+S    +   +D      +
Sbjct: 428 QKDYNQAVEILKVLEKKDNRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 487

Query: 61  YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
             K        ++ KA E++      D   +     +L           +  +A      
Sbjct: 488 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 540

Query: 120 YITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKL--------- 157
           ++  +   +N   V Y +   Y              Q++  +P D +             
Sbjct: 541 FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREG 600

Query: 158 ----MLQYMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEI 196
                 QY       +               ++ + + A  Y     + +      ++ +
Sbjct: 601 DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMV 660

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
              + + G Y  A+  ++     + +     E +  LV     L L D A+E    ++ 
Sbjct: 661 ASCFRRSGNYQKALDTYKDTHRKFPE---NVECLRFLVRLCTDLGLKD-AQEYARKLKR 715



 Score = 35.5 bits (81), Expect = 7.8,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 65/222 (29%), Gaps = 67/222 (30%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117
            KAV +L+++++++A E      +      V   +    + + Y    + QA+S      
Sbjct: 420 NKAVTYLRQKDYNQAVEILKVLEKKD--NRVKSAAATNLSALYYMGKDFAQASSYADIAV 477

Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147
             + Y    P    +K      N DY                     Y +G++Y ++ R 
Sbjct: 478 NSDRY---NPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNR- 533

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
                      L    ++     NS                 A    +I   Y       
Sbjct: 534 -------LDEALDCFLKLHAILRNS-----------------AEVLYQIANIYELMENPS 569

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
            AI     V++           +++L E Y       +A + 
Sbjct: 570 QAIEWLMQVVSVIPTDPQV---LSKLGELYDREGDKSQAFQY 608


>gi|206900499|ref|YP_002251098.1| tetratricopeptide repeat domain protein [Dictyoglomus thermophilum
           H-6-12]
 gi|206739602|gb|ACI18660.1| tetratricopeptide repeat domain protein [Dictyoglomus thermophilum
           H-6-12]
          Length = 867

 Score = 45.9 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 52/141 (36%), Gaps = 15/141 (10%)

Query: 49  DSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           D + ++    +VY +K +     +N+S A EYF +     P +    + +       +  
Sbjct: 741 DKIKEIPLNDKVYVQKGLEAYNNKNYSIAIEYFKKALSYNPNSP---EIMNNIGACLFML 797

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            KY +A +  ++ +         DYV     ++YA + +               ++  ++
Sbjct: 798 NKYDEAIAWFKKALEL-----KKDYVQAYGNLTYAYIQKG------DLISAEDTVNEGLK 846

Query: 168 RYTNSPYVKGARFYVTVGRNQ 188
              N   +K  +  +   + +
Sbjct: 847 YAPNDENLKELKKKIEELKRR 867


>gi|76789284|ref|YP_328370.1| TPR repeat-containing protein [Chlamydia trachomatis A/HAR-13]
 gi|76167814|gb|AAX50822.1| tetratricopeptide repeat family protein [Chlamydia trachomatis
           A/HAR-13]
          Length = 318

 Score = 45.9 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 51/165 (30%), Gaps = 22/165 (13%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
            ++             +Y K  L    + +S+A +   + S  FP   ++ +S  + A +
Sbjct: 158 EEIVTAPSDADLKASALYAKGALLFARKEYSEAIKTLKKVSLQFPSHSLSPESFTLIAKI 217

Query: 104 Q--------YSAGKYQQAASLGEEYITQYPESK----------NVDYVYYLVGMSYAQMI 145
                    Y+    Q A         Q+P             ++   Y           
Sbjct: 218 HCLQALQEPYNEQYLQDARMNAAALRKQHPNHPSNTEVENYIHHMCEAY---ASCLYSTG 274

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
           R     ++A+     Y S  +E + ++ YV      +     Q++
Sbjct: 275 RFYEKKRKAS-SAKIYYSIALENFPDTSYVAKCNKRLERLSKQMS 318



 Score = 44.0 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 57/149 (38%), Gaps = 6/149 (4%)

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
            A+ +LL      ++  +Y +A    ++   Q+P        + L+   +       PY+
Sbjct: 175 YAKGALL------FARKEYSEAIKTLKKVSLQFPSHSLSPESFTLIAKIHCLQALQEPYN 228

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           ++  +      + + +++ N P       Y+       A+     GR+Y K+ +  +A  
Sbjct: 229 EQYLQDARMNAAALRKQHPNHPSNTEVENYIHHMCEAYASCLYSTGRFYEKKRKASSAKI 288

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVAL 240
            + + L N+ D  +  +   RL      +
Sbjct: 289 YYSIALENFPDTSYVAKCNKRLERLSKQM 317



 Score = 35.5 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 81/261 (31%), Gaps = 43/261 (16%)

Query: 23  ALTIFFSI-AVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYF 80
           AL +F  +   C+      +  R     +    ++  E+Y E    + + + F +A   F
Sbjct: 7   ALCLFLVLPCGCYARVPSFEPFRGAIAPNRYTPKHSPELYFEIGDKYFQAKKFKQALLCF 66

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY------VY 134
              +  FP   +  K+  +        G    A     +Y        + +Y      + 
Sbjct: 67  GMITHHFPEHALHPKAQFLVGLCYLEMGHPDLADKALTQYQEL----ADTEYSEQLFAIK 122

Query: 135 YLVGMSYAQMIR-------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           Y +  S+A   R         P   +A    L+    IV           A    +    
Sbjct: 123 YSIAQSFANGKRKNILPLEGFPKLLKADTDALRIFEEIVTA------PSDADLKASALY- 175

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA---------MARLVEAYV 238
             A   +        R EY  AI   + V   +     + E+         +  L E Y 
Sbjct: 176 --AKGALLFA-----RKEYSEAIKTLKKVSLQFPSHSLSPESFTLIAKIHCLQALQEPYN 228

Query: 239 ALALMDEAREVVSLIQERYPQ 259
               + +AR   + +++++P 
Sbjct: 229 E-QYLQDARMNAAALRKQHPN 248


>gi|315644482|ref|ZP_07897614.1| Tetratricopeptide TPR_2 repeat protein [Paenibacillus vortex V453]
 gi|315279989|gb|EFU43286.1| Tetratricopeptide TPR_2 repeat protein [Paenibacillus vortex V453]
          Length = 578

 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 73/203 (35%), Gaps = 29/203 (14%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           +++AV  L    + KA +YF +     P   V        A +    G Y+ +  +    
Sbjct: 25  FDRAVRSLDRYQYDKALKYFRKAVEYEPDNPVNH---CNMAGILSETGDYKASNDVLAHI 81

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           + Q      +   Y+ +  +YA M           +   + +   +E   N  ++  A  
Sbjct: 82  LEQ--VDPLMTECYFYMANNYANM--------EQFEKAEEALVTYLEEDPNGQFLDEAEE 131

Query: 181 YVTVGR---------NQLAAKEVEI----GRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            + +           N++ ++E  +     R  L+ G++  A+   + ++ +Y D     
Sbjct: 132 MMELLHYELNRPAKLNRIKSREGVVEHEHARALLEEGKFAQAVKLLEEIVKDYPDFLA-- 189

Query: 228 EAMARLVEAYVALALMDEAREVV 250
            A   L  AY  +   D A+  +
Sbjct: 190 -ARNNLALAYYYMGRFDTAKRTI 211



 Score = 38.9 bits (90), Expect = 0.66,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 48/138 (34%), Gaps = 17/138 (12%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           E A   L+E  F++A +   +  +D+P    AR      A   Y  G++  A     E +
Sbjct: 159 EHARALLEEGKFAQAVKLLEEIVKDYPDFLAARN---NLALAYYYMGRFDTAKRTIGEVL 215

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
            Q P +        L G+    +      +Q     ++  ++  V      P+     F 
Sbjct: 216 DQEPGN--------LHGLCNLAIFFQHEGNQEQRDRLMDMLTVTV------PFHLEHVFK 261

Query: 182 VTVGRNQLAAKEVEIGRY 199
           +      L   E+  G +
Sbjct: 262 LATTMGILGQHEIAYGHF 279


>gi|315606339|ref|ZP_07881355.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
 gi|315252030|gb|EFU32003.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
          Length = 1110

 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 24/50 (48%)

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
            + ++ NY D EH ++A   L   Y  + +   A   ++ ++  YP+  W
Sbjct: 612 LRRLVDNYPDFEHLDDAYYHLFLLYSRMGMPTVAESYINKLKRGYPKSRW 661


>gi|119492572|ref|ZP_01623790.1| hypothetical protein L8106_08891 [Lyngbya sp. PCC 8106]
 gi|119453041|gb|EAW34211.1| hypothetical protein L8106_08891 [Lyngbya sp. PCC 8106]
          Length = 343

 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 41/131 (31%), Gaps = 14/131 (10%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
           Q + +V        +   ++  +A+  ++  ++ +A    NQ     P      ++ L  
Sbjct: 172 QKNYEVVNQYYEKAKQAVKLNNRAMKLIESGDYQEAISTLNQAVNLNPG---QLEAYLNR 228

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
                    +  A +  ++ I   P +      YY  G  Y Q               L 
Sbjct: 229 GVAYSELNSHASAIANYDKAIQLAPNN---AEAYYYRGDEYLQA--------GNAPKALA 277

Query: 161 YMSRIVERYTN 171
             ++ ++   N
Sbjct: 278 DYNKAIQFNPN 288


>gi|145542869|ref|XP_001457121.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124424936|emb|CAK89724.1| unnamed protein product [Paramecium tetraurelia]
          Length = 846

 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 39/89 (43%), Gaps = 6/89 (6%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D   ++ +YEK  +   ++N++++++ F +       +  A+       F      +Y +
Sbjct: 476 DTTNEQYLYEKGSILFNQKNYNESFDIFLELKN----SEYAQNLNYYLGFCYNQKKEYVE 531

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSY 141
           A      Y+       N++ VY+++G + 
Sbjct: 532 ALKQLNLYLKT--GKDNLEQVYFIIGTAN 558



 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 50/133 (37%), Gaps = 22/133 (16%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVA--RKSLLMSAFVQYSAG 108
           TD  +   +Y K ++ L +    KA +YF     +  P   +A    + LM         
Sbjct: 65  TDPDFVNAIYSKGIVELCQNKLDKAKKYFLTSLEKQ-PNHALALNELASLMI-----KEK 118

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +Y +A    E+     P   +++Y     G+ Y      +   +R T   +QY    +++
Sbjct: 119 QYNEALLNLEKGFQIDPNIPDLNY-----GLGYV-----LARLKRKT-EAIQYFDMAIKQ 167

Query: 169 YTNSP--YVKGAR 179
             N    YV  A 
Sbjct: 168 DPNQKHFYVSKAT 180



 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 69/230 (30%), Gaps = 42/230 (18%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ-AASLGEEYI 121
           +  LF  ++ +  A    N     FP        +L      Y   K +Q A  + E+ +
Sbjct: 418 RGRLFQAQKKYEDAIICLNDGLTKFPQN----LEILDLLAQMYKITKKEQKALEIYEKIL 473

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
           +    ++   Y  Y  G             Q+           +     NS Y +   +Y
Sbjct: 474 SIDTTNEQ--Y-LYEKGSILFN--------QKNYNESFDIFLELK----NSEYAQNLNYY 518

Query: 182 VTVGRNQLAAKEVEIG----RYYLKRGE------Y--VAAIP----RFQLVLANYSD--- 222
           +    NQ   KE          YLK G+      Y  +        +F   +  Y +   
Sbjct: 519 LGFCYNQ--KKEYVEALKQLNLYLKTGKDNLEQVYFIIGTANQFLMKFDEAIDGYQNCIS 576

Query: 223 -AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
                 EA  +L   Y     +++A++      +  P     +    + K
Sbjct: 577 QNPKNSEAYFQLGNVYKQDKQIEDAQKAFEQAVKINPSNSVYKQALGIYK 626


>gi|325294873|ref|YP_004281387.1| hypothetical protein Dester_0679 [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065321|gb|ADY73328.1| Tetratricopeptide TPR_1 repeat-containing protein
           [Desulfurobacterium thermolithotrophum DSM 11699]
          Length = 910

 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 81/245 (33%), Gaps = 84/245 (34%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           +++ FS+A     +  +++P      K  L  A V Y  GKY++A +  E        + 
Sbjct: 205 RKKRFSEALFEIEKLYKEYPE----EKVKLELAKVYYLNGKYEEALNALE--------NV 252

Query: 129 NVDYVYYLVGMSYAQMIRD----------VPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           N +   YL    Y ++             V   Q   K     +  +++ Y ++ YV+  
Sbjct: 253 NSEEAKYLKAWCYFKLGHSEKIPQLIGFNVSRPQIPEK-----LKILLDFYRSTFYVE-- 305

Query: 179 RFYVTVGRNQLAAKEV----------EIGRY------YLKRGEY---------------- 206
              +     +L  K +           IG Y      Y +RG Y                
Sbjct: 306 --KLKKLYPELYPKALIFSFSTQQPQYIGSYHDLGYIYYERGLYKKSLSMLEKAVQNPTN 363

Query: 207 --------------------VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
                               +A++  +  ++ NY +    +EA+    ++Y+       A
Sbjct: 364 KLLLPRTLYLLGKIGSLNTEIASVV-YTELMKNYQNTSFYKEALIPAAKSYLYSGNTVLA 422

Query: 247 REVVS 251
            +++ 
Sbjct: 423 IKLLK 427


>gi|119472190|ref|ZP_01614392.1| putative periplasmic protein contains a protein prenylyltransferase
           domain [Alteromonadales bacterium TW-7]
 gi|119445109|gb|EAW26403.1| putative periplasmic protein contains a protein prenylyltransferase
           domain [Alteromonadales bacterium TW-7]
          Length = 223

 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 49/135 (36%), Gaps = 23/135 (17%)

Query: 56  YQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY---- 110
            + E YE+AV   +K++ + +A   F    + +P +  A           Y  G+     
Sbjct: 102 SENEAYERAVALIMKDKRYDQAIPEFQTFLKTYPESVYASN-------AHYWLGQLLTIK 154

Query: 111 QQAASLGEEY---ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
                  + +   + +YP S         +G         +  +Q  T   L+ ++ +V 
Sbjct: 155 NDGVKAVDHFRVVVNEYPNSNKRPDAMLKLG--------TLLKEQGLTDESLKILNELVT 206

Query: 168 RYTNSPYVKGARFYV 182
           +Y ++   K A   +
Sbjct: 207 QYPSTTAAKLATDRL 221



 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 42/108 (38%), Gaps = 14/108 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             +      ++ Y  S Y   A +++                    + + V A+  F++V
Sbjct: 122 QAIPEFQTFLKTYPESVYASNAHYWLGQLLTI--------------KNDGVKAVDHFRVV 167

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
           +  Y ++    +AM +L        L DE+ ++++ +  +YP    A+
Sbjct: 168 VNEYPNSNKRPDAMLKLGTLLKEQGLTDESLKILNELVTQYPSTTAAK 215



 Score = 38.9 bits (90), Expect = 0.79,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 44/130 (33%), Gaps = 26/130 (20%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
              +Y QA    + ++  YPES      +Y +G      +  +  D       + +   +
Sbjct: 116 KDKRYDQAIPEFQTFLKTYPESVYASNAHYWLG-----QLLTIKNDG---VKAVDHFRVV 167

Query: 166 VERYTNSPYVKGARFYV-TVGRNQ-LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
           V  Y NS     A   + T+ + Q L  + ++I                   ++  Y   
Sbjct: 168 VNEYPNSNKRPDAMLKLGTLLKEQGLTDESLKI----------------LNELVTQYPST 211

Query: 224 EHAEEAMARL 233
             A+ A  RL
Sbjct: 212 TAAKLATDRL 221


>gi|291392959|ref|XP_002712851.1| PREDICTED: intraflagellar transport 88 homolog [Oryctolagus
           cuniculus]
          Length = 831

 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/240 (13%), Positives = 77/240 (32%), Gaps = 40/240 (16%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLM 99
           Q+S    L   +D      +  K        ++ KA E++      D   +     +L  
Sbjct: 469 QASSYADLAVNSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYN 524

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
                    +  +A      ++  +   +N   V Y +   Y +++ D           +
Sbjct: 525 IGLSYKKLNRLSEALDC---FLKLHAILRNSAQVLYQIANVY-ELMEDPN-------QAI 573

Query: 160 QYMSRIVERYT-NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA-IPRFQLVL 217
           +++ +++     +S     A   +    +    K  +  +YY +   Y  + I   + + 
Sbjct: 574 EWLMQLISVVPTDSR----ALSKLGELHDSEGDKS-QAFQYYYESYRYFPSNIEVIEWLG 628

Query: 218 ANYSDAEHAEEAMARLVEA-----------------YVALALMDEAREVVSLIQERYPQG 260
           A Y D +  E+A+     A                 +       +A +    I +++P+ 
Sbjct: 629 AYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHKKFPEN 688


>gi|166713249|ref|ZP_02244456.1| hypothetical protein Xoryp_17860 [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 605

 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 37/111 (33%), Gaps = 9/111 (8%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           ++    +     VC L   +   + D  L    D   Q+ + +  V   ++ +F+ A + 
Sbjct: 324 FRRRAVVAVLAMVCVLPFAQSARAADGTLWQRADQLQQQRL-DAGVQAYRKGDFAAAQKA 382

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           F              + L          G+Y  A    +  + Q+P  ++ 
Sbjct: 383 FEAVP--------TDEGLYNLGNALARQGQYDAAIDAYDRALKQHPNQQDA 425


>gi|258510428|ref|YP_003183862.1| Tetratricopeptide TPR_2 repeat-containing protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257477154|gb|ACV57473.1| Tetratricopeptide TPR_2 repeat protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 587

 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 47/110 (42%), Gaps = 11/110 (10%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           +    FL+   F  A E+  Q     P + +A ++ L  A+  Y  G+Y +A ++ E  +
Sbjct: 168 QDGRYFLENGQFEVAVEWLEQVVAADP-SHIAARNNLSLAY--YYTGQYDKALAMAESVL 224

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            + P++        L  +    ++     D+   +  ++ + +++  + +
Sbjct: 225 ERQPDN--------LHALCNRALLLQHFGDEDRLRRAVEPLQKVIPLHPD 266



 Score = 36.6 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 82/217 (37%), Gaps = 33/217 (15%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           +E+ + FL+  + ++A + F +     P   V        A V    G ++ +  L   Y
Sbjct: 30  FERGMRFLQRNDLARAVKAFQRTVEYEPDNPVN---YCNLAGVLAELGDFEASNELL-HY 85

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           + ++    ++   ++ +  +YA +               +++ R ++   +  Y   A  
Sbjct: 86  VLEH-MDPHMSECWFYLANNYANL--------GDYDAAEEHLLRYLDLDPDGEYAAEAEE 136

Query: 181 YVTVGRNQLAA-----------------KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
            +++  ++                    + ++ GRY+L+ G++  A+   + V+A   D 
Sbjct: 137 MLSILIDEFGGGRALERRRREEARAETMQAIQDGRYFLENGQFEVAVEWLEQVVAA--DP 194

Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            H   A   L  AY      D+A  +   + ER P  
Sbjct: 195 SHIA-ARNNLSLAYYYTGQYDKALAMAESVLERQPDN 230


>gi|237802976|ref|YP_002888170.1| hypothetical protein JALI_5501 [Chlamydia trachomatis B/Jali20/OT]
 gi|237804898|ref|YP_002889052.1| hypothetical protein CTB_5501 [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231273198|emb|CAX10111.1| putative exported protein [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231274210|emb|CAX11004.1| putative exported protein [Chlamydia trachomatis B/Jali20/OT]
          Length = 318

 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 51/165 (30%), Gaps = 22/165 (13%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
            ++             +Y K  L    + +S+A +   + S  FP   ++ +S  + A +
Sbjct: 158 EEIVTAPSDADLKASALYAKGALLFARKEYSEAIKTLKKVSLQFPSHSLSPESFTLIAKI 217

Query: 104 Q--------YSAGKYQQAASLGEEYITQYPESK----------NVDYVYYLVGMSYAQMI 145
                    Y+    Q A         Q+P             ++   Y           
Sbjct: 218 HCLQALQEPYNEQYLQDARMNAAALRKQHPNHPSNTEVENYIHHMCEAY---ASCLYSTG 274

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
           R     ++A+     Y S  +E + ++ YV      +     Q++
Sbjct: 275 RFYEKKRKAS-SAKIYYSIALENFPDTSYVAKCNKRLERLSKQMS 318



 Score = 44.0 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 57/149 (38%), Gaps = 6/149 (4%)

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
            A+ +LL      ++  +Y +A    ++   Q+P        + L+   +       PY+
Sbjct: 175 YAKGALL------FARKEYSEAIKTLKKVSLQFPSHSLSPESFTLIAKIHCLQALQEPYN 228

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           ++  +      + + +++ N P       Y+       A+     GR+Y K+ +  +A  
Sbjct: 229 EQYLQDARMNAAALRKQHPNHPSNTEVENYIHHMCEAYASCLYSTGRFYEKKRKASSAKI 288

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVAL 240
            + + L N+ D  +  +   RL      +
Sbjct: 289 YYSIALENFPDTSYVAKCNKRLERLSKQM 317



 Score = 35.5 bits (81), Expect = 7.2,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 81/261 (31%), Gaps = 43/261 (16%)

Query: 23  ALTIFFSI-AVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYF 80
           AL +F  +   C+      +  R     +    ++  E+Y E    + + + F +A   F
Sbjct: 7   ALCLFLVLPCGCYARVPSFEPFRGAIAPNRYTPKHSPELYFEMGDKYFQAKKFKQALLCF 66

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY------VY 134
              +  FP   +  K+  +        G    A     +Y        + +Y      + 
Sbjct: 67  GMITHHFPEHALHPKAQFLVGLCYLEMGHPDLADKALTQYQEL----ADTEYSEQLFAIK 122

Query: 135 YLVGMSYAQMIR-------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           Y +  S+A   R         P   +A    L+    IV           A    +    
Sbjct: 123 YSIAQSFANGKRKNILPLEGFPKLLKADTDALRIFEEIVTA------PSDADLKASALY- 175

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA---------MARLVEAYV 238
             A   +        R EY  AI   + V   +     + E+         +  L E Y 
Sbjct: 176 --AKGALLFA-----RKEYSEAIKTLKKVSLQFPSHSLSPESFTLIAKIHCLQALQEPYN 228

Query: 239 ALALMDEAREVVSLIQERYPQ 259
               + +AR   + +++++P 
Sbjct: 229 E-QYLQDARMNAAALRKQHPN 248


>gi|325695460|gb|EGD37360.1| hypothetical protein HMPREF9383_0391 [Streptococcus sanguinis
           SK150]
          Length = 412

 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 69/206 (33%), Gaps = 28/206 (13%)

Query: 76  AYEYFNQCSRDFPFAG-VAR---KSLLMSAFVQYSAGKYQQAASLGEEYITQY---PESK 128
           A +        FP +  +A    K L+          +  +  +  ++    +   P S+
Sbjct: 158 AADKLQALHEQFPDSRDIAESFAKILVNL---SAEQSELNELKATVDKLQVLHEHFPNSR 214

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           ++   + ++ +      +    +  AT   L  +    E + +SP +  +   + +    
Sbjct: 215 DIAEAFAMI-LFNLSAEQSELNEPEATVEQLHALH---EDFPDSPNIAESFA-MILVNLS 269

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA----MARLVEAYVALALMD 244
           +   E+          E  A + + Q +   Y D+    E+    +  L      L   +
Sbjct: 270 VEQSELN---------ELKATVDKLQALHEQYPDSPDIAESFAKILVNLSVEQSELNEPE 320

Query: 245 EAREVVSLIQERYPQGYWARYVETLV 270
            A + +  + E++P   +      ++
Sbjct: 321 VAVDKLQALHEKFPDSRYIAESFAMI 346



 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 20/157 (12%), Positives = 55/157 (35%), Gaps = 29/157 (18%)

Query: 116 LGEEYITQY---PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL---MLQYMSRIVERY 169
             ++    +   P+S+++         S+A ++ ++  +Q            +  + E++
Sbjct: 117 AADKLQALHEQFPDSRDIAE-------SFAMILFNLSLEQSGLNEQEVAADKLQALHEQF 169

Query: 170 TNSPYVKGARFYVTVGRNQLAA-KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
            +S  +  +   +    N  A   E+          E  A + + Q++  ++ ++    E
Sbjct: 170 PDSRDIAESFAKI--LVNLSAEQSELN---------ELKATVDKLQVLHEHFPNSRDIAE 218

Query: 229 A----MARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           A    +  L      L   +   E +  + E +P   
Sbjct: 219 AFAMILFNLSAEQSELNEPEATVEQLHALHEDFPDSP 255



 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 23/148 (15%), Positives = 54/148 (36%), Gaps = 30/148 (20%)

Query: 124 YPESKNVD--YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
           YPES+++   Y   L+ +S    ++    ++   K  +  +  + E + NS  +  +   
Sbjct: 46  YPESEDIALGYAIILMILS----VKKPELNE--LKATVDKLQALHEHFPNSRDIAESFAK 99

Query: 182 VTV---GRNQ-LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE--AMARLVE 235
           +      +   L  +E+              A  + Q +   + D+    E  AM     
Sbjct: 100 ILFNLSLKQSGLNEQEI--------------AADKLQALHEQFPDSRDIAESFAMILFNL 145

Query: 236 AYVALALMDE--AREVVSLIQERYPQGY 261
           +     L ++  A + +  + E++P   
Sbjct: 146 SLEQSGLNEQEVAADKLQALHEQFPDSR 173


>gi|288927358|ref|ZP_06421205.1| tetratricopeptide repeat protein [Prevotella sp. oral taxon 317
           str. F0108]
 gi|288330192|gb|EFC68776.1| tetratricopeptide repeat protein [Prevotella sp. oral taxon 317
           str. F0108]
          Length = 385

 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/159 (13%), Positives = 62/159 (38%), Gaps = 11/159 (6%)

Query: 7   RAICIFEAWAYQLYKFAL-----TIFFSIAVCFLVGWER-QSSRDVYLDSVTDVRYQREV 60
           R + I     + +    L      +   ++    +G    + ++ +  ++        ++
Sbjct: 98  RCLTIAGLVLHNVDAIVLNSQSSPLLLGLSAIQRLGRVTLRGNKLILTNNKHVSISAVKI 157

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
            ++   +++ Q++ +A +  ++   +     V    L        +   + ++ + G  +
Sbjct: 158 RDEVSTYMRSQDYRQAIKLLHELENND---SVNENDLFNLIECYVNMKDFNKSLACGNSW 214

Query: 121 ITQYPES--KNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
           I  Y  S  ++V  VYY +G+SY ++      D+R  + 
Sbjct: 215 IALYGSSWGQHVSDVYYYLGVSYMELKDFHEADKRFAEA 253


>gi|217032338|ref|ZP_03437834.1| hypothetical protein HPB128_132g36 [Helicobacter pylori B128]
 gi|216946004|gb|EEC24618.1| hypothetical protein HPB128_132g36 [Helicobacter pylori B128]
          Length = 791

 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 49/137 (35%), Gaps = 9/137 (6%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             +T   Y    Y +A   +  Q +  A    ++  +++P     +   L+        G
Sbjct: 176 PLLTTKGYDLNAYLEAKKQIDSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIALGQLG 235

Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            K      +G ++I  YP   N+    Y V  +  +            K  ++Y  RI+ 
Sbjct: 236 IKKSLLIDIGTKWIKNYPTDPNIPEALYYVAKALDEN--------NNYKQAMRYYKRILL 287

Query: 168 RYTNSPYVKGARFYVTV 184
            Y NS Y   A+  + +
Sbjct: 288 EYKNSRYAPLAQMRLAI 304



 Score = 43.2 bits (101), Expect = 0.044,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 31/99 (31%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
             + RA   +    ++   + L I     +                +  TD      +Y 
Sbjct: 205 RTISRAFKNYPQTIFKKDLYLLEIIALGQLGIKKSLLIDIGTKWIKNYPTDPNIPEALYY 264

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
            A    +  N+ +A  Y+ +   ++  +  A  + +  A
Sbjct: 265 VAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRLA 303



 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 16/47 (34%)

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
           + NY    +  EA+  + +A        +A      I   Y    +A
Sbjct: 249 IKNYPTDPNIPEALYYVAKALDENNNYKQAMRYYKRILLEYKNSRYA 295


>gi|194225856|ref|XP_001917215.1| PREDICTED: similar to tetratricopeptide repeat domain 16 [Equus
           caballus]
          Length = 835

 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 42/124 (33%), Gaps = 27/124 (21%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFP----FAGVARKSLLMSAFVQYSAGKYQQA 113
           RE Y +    L+++++  A  +F++     P    F   A ++           G +  A
Sbjct: 62  REHYYRGQRCLEQEDWEMAVLFFSRALHLDPRLVDF--YALRAE-----AYIQLGDFSSA 114

Query: 114 ASLGEEYITQYPESKNVDY------VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
                  I+  P  +N DY      V YL G    +        Q + +  L   S+  E
Sbjct: 115 IQNLRRAISFQP--ENTDYLERLSFVLYLQGQCLFE--------QCSFRDALNVFSQASE 164

Query: 168 RYTN 171
               
Sbjct: 165 LQPE 168


>gi|167948882|ref|ZP_02535956.1| hypothetical protein Epers_21162 [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 473

 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 43/115 (37%), Gaps = 9/115 (7%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDS-----VTDVRYQREVYEKAVLFLKEQNFSKAY 77
           +L +   IA+    GW +   ++   D       +     ++ Y + V   +  +++ A 
Sbjct: 8   SLLLVSLIALPLQAGWFQNQEQEAEADYRQGHYESAAEKFQDPYRRGVAKYRSGDYASAE 67

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
             F Q  R+     V   +       +   G  + A    +E ++Q P+ ++  Y
Sbjct: 68  SEFAQVERE----SVKLDAEYNLGNARLQQGNLEGAIQAYQEVLSQQPDHEDASY 118



 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 42/125 (33%), Gaps = 29/125 (23%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++A    ++ ++  A E F    R                  +Y +G Y  A S   E+ 
Sbjct: 29  QEAEADYRQGHYESAAEKFQDPYRR--------------GVAKYRSGDYASAES---EFA 71

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
               ES  +D   Y +G +  Q        Q   +  +Q    ++ +  +      A + 
Sbjct: 72  QVERESVKLD-AEYNLGNARLQ--------QGNLEGAIQAYQEVLSQQPDHE---DASYN 119

Query: 182 VTVGR 186
           + + R
Sbjct: 120 LALAR 124


>gi|148264413|ref|YP_001231119.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4]
 gi|146397913|gb|ABQ26546.1| Tetratricopeptide TPR_2 repeat protein [Geobacter uraniireducens
           Rf4]
          Length = 860

 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 44/287 (15%), Positives = 94/287 (32%), Gaps = 75/287 (26%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT--------------------DVRYQR 58
           +YK    I  +I +  + G   ++  ++Y   V                     D  Y  
Sbjct: 1   MYK---VIIIAIVLFNIAGCSGKTKEELYAKGVKQINDGNPNGAIVFLKNALEKDQNYLD 57

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
             Y+ A  ++    + +A + F +  R  P +    + +L  A +  S+ K   A     
Sbjct: 58  ARYQLAKAYVAAVKYEQAEKEFQKVLRQNP-SR--VEIMLDLARIYNSSKKPDLAIDAMG 114

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN------- 171
           +Y+  + +S        ++G+ YA   R              Y+ + ++           
Sbjct: 115 KYLKSHQQSSE---ALEIMGIGYALKNR--------LDEAENYLLQALKADPRRSGAKLD 163

Query: 172 --SPYV-----KGARFYVTVGRN----------QLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
               Y+     K AR  +                LA  E  +G     +     A+  +Q
Sbjct: 164 LAGIYIACGREKDARQRLDEIIKVDPKSSRAYYMLAGLENSVG----NKDR---ALEIYQ 216

Query: 215 LVLA--NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            +L    +  +     A+ +    Y+    +D+A ++ + + + YP 
Sbjct: 217 TILKINKFDTS-----AIYKSGLIYIDKGELDKAEKLAAHLLQNYPN 258



 Score = 39.7 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 15/111 (13%), Positives = 37/111 (33%), Gaps = 15/111 (13%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y+  ++++ +    KA +      +++P      +  L      Y    Y +A +  + 
Sbjct: 229 IYKSGLIYIDKGELDKAEKLAAHLLQNYPNRADGNR--LKGLVCYYK-KNYTEAIAALQN 285

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
            +   P  +     YY +G+S               +  L     I++   
Sbjct: 286 SLRTQPNME----AYYFLGLSLYNR--------GEFENALSQFRIILDYNP 324



 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 36/89 (40%), Gaps = 11/89 (12%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           K  ++L+E+ +  A + F+      P   +  +  + +  V      + +A +    +IT
Sbjct: 603 KGRIYLQEKKYKDAIKVFDDIEAISP--DLGFRLKIDTCVV---MKDFSKAVAQARRFIT 657

Query: 123 QYPESKNVDYVY-YLVGMSYAQMIRDVPY 150
             P S      Y Y+V  S  +   +V +
Sbjct: 658 IKPNS-----AYGYMVLASVYERQNNVDH 681


>gi|297181013|gb|ADI17214.1| soluble lytic murein transglycosylase and related regulatory
           proteins (some contain lysm/invasin domains) [uncultured
           delta proteobacterium HF0070_10I02]
          Length = 693

 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 34/254 (13%), Positives = 66/254 (25%), Gaps = 53/254 (20%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
             L    DV   +  +  A + L +     A   +       P +  + ++    A    
Sbjct: 131 AELPKPDDVDPGQVRWLLAQVALAQGRDEAAQRQWESLWALNPTSAYSDQAEEELADAGL 190

Query: 106 S-AGKYQQAASLGEEYIT----QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
                 Q+   L    I      Y          Y   +S  Q +      +   +    
Sbjct: 191 KILPNKQRGIDLITSRIRSLEKLY---------RYREALSLRQQLPTDHRLREPHRFAAA 241

Query: 161 YMS----------------------------RIVERYTNS-----PYVKGARFYVTVGRN 187
                                          ++      S      Y+            
Sbjct: 242 VFKAKDYARATNLLGALSNRSADEDILLALAQVRSGDPESSMRTYRYIAKGSGSTAE--- 298

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
            LA  ++  G  +  +G++  AI  F   L  Y   +HA+ A+     A +      +AR
Sbjct: 299 -LAKYKL--GYMHWDQGQWSDAIQSFADYLIAYPTGKHADSALWFTAMAQMRFGANAQAR 355

Query: 248 EVVSLIQERYPQGY 261
             +  +Q  +P+  
Sbjct: 356 NTLERLQSEHPRSS 369



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 38/102 (37%), Gaps = 2/102 (1%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV--YEKAVLFLKEQNFSKAYEYFNQCSR 85
             +A+  +   + +SS   Y           E+  Y+   +   +  +S A + F     
Sbjct: 267 ILLALAQVRSGDPESSMRTYRYIAKGSGSTAELAKYKLGYMHWDQGQWSDAIQSFADYLI 326

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
            +P    A  +L  +A  Q   G   QA +  E   +++P S
Sbjct: 327 AYPTGKHADSALWFTAMAQMRFGANAQARNTLERLQSEHPRS 368



 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 18/152 (11%), Positives = 43/152 (28%), Gaps = 37/152 (24%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRD------------------------FPF-----AGVAR 94
           A    K +++++A       S                          + +        A 
Sbjct: 239 AAAVFKAKDYARATNLLGALSNRSADEDILLALAQVRSGDPESSMRTYRYIAKGSGSTAE 298

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
            +     ++ +  G++  A     +Y+  YP  K+ D   +   M+  +          A
Sbjct: 299 LAKYKLGYMHWDQGQWSDAIQSFADYLIAYPTGKHADSALWFTAMAQMRF--------GA 350

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
                  + R+   +  S    GA +++    
Sbjct: 351 NAQARNTLERLQSEHPRSSLKIGAAYWLAKLH 382


>gi|225024246|ref|ZP_03713438.1| hypothetical protein EIKCOROL_01118 [Eikenella corrodens ATCC
           23834]
 gi|224943271|gb|EEG24480.1| hypothetical protein EIKCOROL_01118 [Eikenella corrodens ATCC
           23834]
          Length = 209

 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 5/91 (5%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L     +A     GW   SS    +++         V+++     +    ++A +   Q 
Sbjct: 26  LFALLVVAAIGYFGWVMYSSHQRSVNN-----EAVAVFDQWAENQQANKPAEAAKLLTQL 80

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
              +P +  A ++ LM A   +  GKY +A 
Sbjct: 81  QSQYPTSISAAQATLMQAGAAFDQGKYDEAI 111


>gi|160902985|ref|YP_001568566.1| TPR repeat-containing protein [Petrotoga mobilis SJ95]
 gi|160360629|gb|ABX32243.1| Tetratricopeptide TPR_2 repeat protein [Petrotoga mobilis SJ95]
          Length = 358

 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 68/193 (35%), Gaps = 36/193 (18%)

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV-YYLVGMSYAQMIRDVP 149
                +L     + ++ G+Y++AA + ++ I   P +    YV Y+++  +Y Q      
Sbjct: 163 PWNIAALSELGELYFNLGEYEKAAEIWKKEIELSPNN----YVTYFMIADAYMQK----- 213

Query: 150 YDQRATKLMLQYMSRIVERYTNS---PY-----------VKGARFYVTVGRNQLAAKEVE 195
                 +     + + + R+ NS    Y              A        N       +
Sbjct: 214 ---GDYEKAAHILEKFLNRFPNSVLGKYELSTIYEKLSRTTEANELKEEILNTTPEYSTD 270

Query: 196 I---GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           I    +   + G+Y       +  +    + EH +     LV  Y+ +   +EA+ +   
Sbjct: 271 IEVWAKVMFENGKYKEVQNFLEKYIDQDKENEHFK---LLLVIPYLKVKKFEEAKSIYQE 327

Query: 253 IQERYPQGYWARY 265
           I+++Y    W  Y
Sbjct: 328 IKDKY---MWYIY 337



 Score = 40.9 bits (95), Expect = 0.17,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 3/75 (4%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D      + E   L+     + KA E + +     P   V      M A      G Y++
Sbjct: 162 DPWNIAALSELGELYFNLGEYEKAAEIWKKEIELSPNNYVT---YFMIADAYMQKGDYEK 218

Query: 113 AASLGEEYITQYPES 127
           AA + E+++ ++P S
Sbjct: 219 AAHILEKFLNRFPNS 233


>gi|300869841|ref|YP_003784712.1| putative TPR-repeat-containing protein [Brachyspira pilosicoli
           95/1000]
 gi|300687540|gb|ADK30211.1| putative TPR-repeat-containing protein [Brachyspira pilosicoli
           95/1000]
          Length = 406

 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/122 (13%), Positives = 40/122 (32%), Gaps = 9/122 (7%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
            D      +++ A      +++  A   +N     +P +  A  S      +      Y 
Sbjct: 194 EDNSEVALLFKSAEELKNMKDYDNAISSYNNVISQYPDSKYAVYSYFRVGDIYNLKKDYT 253

Query: 112 QAASLGEEYITQYPESKN-VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
            A    ++       + N      Y +G+        V   +   +  ++Y + ++ +Y 
Sbjct: 254 NAFDTYKKASELKTANNNQKAAALYSMGV--------VRKVENNNQEAMKYFNDVIAKYP 305

Query: 171 NS 172
           N+
Sbjct: 306 NT 307



 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 54/161 (33%), Gaps = 22/161 (13%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
            +   L +  + +    +Y   V+   E N  +A +YFN     +P       ++   A 
Sbjct: 260 KKASELKTANNNQKAAALYSMGVVRKVENNNQEAMKYFNDVIAKYPNTYSYGNAVYEIAD 319

Query: 103 VQYSAGK-------YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
                GK        +++ +  E++      SK  D    L+   Y     +V    R  
Sbjct: 320 SLKQMGKISDGLNMLEKSLASKEKF------SKRAD-AMLLLAEIYETGNNNV----RDF 368

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
                  ++ +  Y N+   K A       +N L+   V I
Sbjct: 369 NKAYLTYNQYLSEYPNTSKTKYANDR----KNFLSRNAVNI 405


>gi|186681554|ref|YP_001864750.1| hypothetical protein Npun_R1081 [Nostoc punctiforme PCC 73102]
 gi|186464006|gb|ACC79807.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC
           73102]
          Length = 722

 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/149 (12%), Positives = 46/149 (30%), Gaps = 42/149 (28%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           + +++     K++++ KA   F       P       +++     +Y+   Y+ A +   
Sbjct: 453 DYFQQGDAAYKDRDYEKAIASFTAAIEQQPTH---TTAIVNRGNARYNLKDYEGAVTDYS 509

Query: 119 EYITQYPE--------------------SKNVDY-------------------VYYLVGM 139
           + +   P                       + +Y                    Y   G+
Sbjct: 510 QALKINPNQTKALVNRGNARYMLAEYSNDPDTEYNLAIADYNRAIGLDKNEIEAYIRRGI 569

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVER 168
              QM +     Q+A K  +   +++++R
Sbjct: 570 VRTQMAKYSGESQQAYKRAIADFTQVIKR 598


>gi|199559777|ref|NP_035285.2| serine/threonine-protein phosphatase 5 [Mus musculus]
 gi|148710114|gb|EDL42060.1| protein phosphatase 5, catalytic subunit [Mus musculus]
          Length = 499

 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 50/166 (30%), Gaps = 34/166 (20%)

Query: 40  RQSSRDVYLDSVTDV---RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VAR 94
           R    +   D        +   E+  +A  + K +++  A ++++Q     P        
Sbjct: 8   RTECAETPRDEPPADGTLKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPGNAIYYGN 67

Query: 95  KSLLMSAF----VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +S    A+       Y+ G   +A  L ++YI            YY    S   +     
Sbjct: 68  RS---LAYLRTECYGYALGDATRAIELDKKYIK----------GYYRRAASNMAL----- 109

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
                 +  L+    +V+   N      A+         +  K  E
Sbjct: 110 ---GKFRAALRDYETVVKVKPNDK---DAKMKYQECSKIVKQKAFE 149


>gi|90408528|ref|ZP_01216685.1| Tol system periplasmic component YbgF [Psychromonas sp. CNPT3]
 gi|90310347|gb|EAS38475.1| Tol system periplasmic component YbgF [Psychromonas sp. CNPT3]
          Length = 242

 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 47/127 (37%), Gaps = 22/127 (17%)

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
             +Y+QA    +E+IT YP+S  +    Y +G    +        ++  +   Q    + 
Sbjct: 135 NKEYKQAIVAFDEFITTYPKSNYIANAQYWLGQLLYK--------EKQREKARQAFLVVT 186

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
           + +  S     A F + +    L                  +A   +Q V+  Y+D+  A
Sbjct: 187 QEHLTSNKRADALFKIGIIDEYLGKN--------------ASAKIFYQKVIQEYADSSAA 232

Query: 227 EEAMARL 233
           + A  RL
Sbjct: 233 KLATQRL 239



 Score = 39.7 bits (92), Expect = 0.38,   Method: Composition-based stats.
 Identities = 15/135 (11%), Positives = 49/135 (36%), Gaps = 15/135 (11%)

Query: 55  RYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
             +++ Y+K+V   L  + + +A   F++    +P +     +      + Y   + ++A
Sbjct: 119 PNEKDAYQKSVNLVLVNKEYKQAIVAFDEFITTYPKSNYIANAQYWLGQLLYKEKQREKA 178

Query: 114 ASLGEEYI---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
                 ++    ++  S       + +G+    + ++             +  ++++ Y 
Sbjct: 179 RQA---FLVVTQEHLTSNKRADALFKIGIIDEYLGKNAS--------AKIFYQKVIQEYA 227

Query: 171 NSPYVKGARFYVTVG 185
           +S   K A   +   
Sbjct: 228 DSSAAKLATQRLNSL 242


>gi|296125516|ref|YP_003632768.1| response regulator aspartate phosphatase containing TPR repeat
           domain protein [Brachyspira murdochii DSM 12563]
 gi|296017332|gb|ADG70569.1| response regulator aspartate phosphatase containing TPR repeat
           domain protein [Brachyspira murdochii DSM 12563]
          Length = 148

 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 35/97 (36%), Gaps = 8/97 (8%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            +F  I V  L              SV + RY + + EKA      +N+  A  Y+    
Sbjct: 9   FVFLVILVFLLASCAS-----AVKISVEEERYPKIIAEKAYTEFGNKNYKTAIAYYQYII 63

Query: 85  RDF---PFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
            +F    ++     +     F  Y   KY++A +  +
Sbjct: 64  DNFDRENYSKDVAWAYYEIGFCYYYQNKYEEALTYFD 100


>gi|262195711|ref|YP_003266920.1| hypothetical protein Hoch_2491 [Haliangium ochraceum DSM 14365]
 gi|262079058|gb|ACY15027.1| Tetratricopeptide repeat protein [Haliangium ochraceum DSM 14365]
          Length = 1155

 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 70/216 (32%), Gaps = 43/216 (19%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNF--SKAYEYFNQCSRDFPFAGVARKSLLMSA-- 101
           +      D      ++  A L+ ++Q +   +A +   +          A+ +   SA  
Sbjct: 90  IEDTDPDDPERPDLLFRLAELYAQQQRYWRFRAMDLHAEIDA-------AKTAKEKSALK 142

Query: 102 ---FVQYSAGKYQ--QAASLGEEYITQYPES---KNVDYVYYLVGMSYAQMIRDVPYDQR 153
                 + A K     A  + +  I   P +     +D   Y     YA  +++  Y   
Sbjct: 143 QKQDQYFKASKTALLSAVKVYKS-IADDPRNRNYPRMDEALYY----YAYTLQNAEY--- 194

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
             K   Q   ++++ Y NS Y+  A               +    YY  +     A   +
Sbjct: 195 -AKEARQVFHKLIKDYPNSKYIPDAY--------------LAFADYYFAQNSLANAEQFY 239

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
             VL  + +A     A+ +    Y+ L    +A E 
Sbjct: 240 DKVLQ-FPEARVYNFALYKKGWVYLNLDRSQDALET 274



 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 52/151 (34%), Gaps = 14/151 (9%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           +V+ D+         +Y   V + + ++   A + F   +  FP A   +K++    +  
Sbjct: 691 EVFNDNSEAEDAPIILYNAGVCYEQGRSLGAAIQMFTFLTNFFPDANETKKAIARLGYNF 750

Query: 105 YSAGKYQQAASLGEEYITQYPESKNV-----DYVYYLVGMSYAQM--------IRDVPY- 150
                Y+QAA   EEY  ++    N      D V+Y  G+             IR     
Sbjct: 751 AQVAYYRQAAERLEEYARRFGGEDNAHKALWDAVFYRKGVGDDDQAIEDTKFFIRQYGRK 810

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                   +  M+ I E+  +S  +      
Sbjct: 811 KPTEAADAMWSMTSIYEKRGDSEEIIDHLQR 841



 Score = 35.5 bits (81), Expect = 7.7,   Method: Composition-based stats.
 Identities = 18/140 (12%), Positives = 42/140 (30%), Gaps = 28/140 (20%)

Query: 156 KLMLQYMSRIVE-RYTNSPYVKGARFYVTVGRNQLAAK----------EVEIGRY----- 199
           K  +Q  + ++E    + P      F +     Q              E++  +      
Sbjct: 80  KEQIQQFALLIEDTDPDDPERPDLLFRLAELYAQQQRYWRFRAMDLHAEIDAAKTAKEKS 139

Query: 200 --------YLK--RGEYVAAIPRFQLVLAN--YSDAEHAEEAMARLVEAYVALALMDEAR 247
                   Y K  +   ++A+  ++ +  +    +    +EA+              EAR
Sbjct: 140 ALKQKQDQYFKASKTALLSAVKVYKSIADDPRNRNYPRMDEALYYYAYTLQNAEYAKEAR 199

Query: 248 EVVSLIQERYPQGYWARYVE 267
           +V   + + YP   +     
Sbjct: 200 QVFHKLIKDYPNSKYIPDAY 219


>gi|119628677|gb|EAX08272.1| intraflagellar transport 88 homolog (Chlamydomonas), isoform CRA_g
           [Homo sapiens]
 gi|194374639|dbj|BAG62434.1| unnamed protein product [Homo sapiens]
          Length = 805

 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 35/299 (11%), Positives = 88/299 (29%), Gaps = 56/299 (18%)

Query: 2   SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60
                +A+ I +    +  +       +++  + +G +  Q+S    +   +D      +
Sbjct: 409 QKDYNQAVEILKVLEKKDNRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 468

Query: 61  YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
             K        ++ KA E++      D   +     +L           +  +A      
Sbjct: 469 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 521

Query: 120 YITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKL--------- 157
           ++  +   +N   V Y +   Y              Q++  +P D +             
Sbjct: 522 FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREG 581

Query: 158 ----MLQYMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEI 196
                 QY       +               ++ + + A  Y     + +      ++ +
Sbjct: 582 DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMV 641

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
              + + G Y  A+  ++     + +     E +  LV     L L D A+E    ++ 
Sbjct: 642 ASCFRRSGNYQKALDTYKDTHRKFPE---NVECLRFLVRLCTDLGLKD-AQEYARKLKR 696



 Score = 35.5 bits (81), Expect = 9.1,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 65/222 (29%), Gaps = 67/222 (30%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117
            KAV +L+++++++A E      +      V   +    + + Y    + QA+S      
Sbjct: 401 NKAVTYLRQKDYNQAVEILKVLEKKD--NRVKSAAATNLSALYYMGKDFAQASSYADIAV 458

Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147
             + Y    P    +K      N DY                     Y +G++Y ++ R 
Sbjct: 459 NSDRY---NPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNR- 514

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
                      L    ++     NS                 A    +I   Y       
Sbjct: 515 -------LDEALDCFLKLHAILRNS-----------------AEVLYQIANIYELMENPS 550

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
            AI     V++           +++L E Y       +A + 
Sbjct: 551 QAIEWLMQVVSVIPTDPQV---LSKLGELYDREGDKSQAFQY 589


>gi|56118654|ref|NP_001007891.1| protein phosphatase 5, catalytic subunit [Xenopus (Silurana)
           tropicalis]
 gi|51258924|gb|AAH80162.1| ppp5c protein [Xenopus (Silurana) tropicalis]
          Length = 493

 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 44/141 (31%), Gaps = 25/141 (17%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYS 106
            +++  +   E+ E+A  + + +++ +A +Y+ Q     P        +SL         
Sbjct: 14  PTISREKTAEELKEQANEYFRVKDYDRAVQYYTQAIGLSPDTAIYYGNRSL-----AYLR 68

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
              Y  A +     I       +  Y+  YY    S   +           K  L+    
Sbjct: 69  TECYGYALADASRAIQL-----DAKYIKGYYRRAASNMAL--------GKLKAALKDYET 115

Query: 165 IVERYTNSPYVKGARFYVTVG 185
           +V+   +      A+      
Sbjct: 116 VVKVRPHDK---DAQMKFQEC 133


>gi|254417207|ref|ZP_05030952.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
 gi|196176013|gb|EDX71032.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
          Length = 260

 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 38/275 (13%), Positives = 90/275 (32%), Gaps = 41/275 (14%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + KF   I  ++    +V  + Q +  +    V      + +   A +  ++ ++  A  
Sbjct: 1   MIKFPNHIPAALIGTAIVWVQPQFAVALTNLVVAQQPTVQNLINSARIKAEKGDYQGAIA 60

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
              Q  +    +    +S    A   Y    YQ A +   + I   P+       YY  G
Sbjct: 61  DLTQALQL---SPNNAESYHRRANAYYQLENYQGAIADYNQAIQLNPDDVK---AYYNRG 114

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYVKGARFYVTVGRNQ--LAAK-- 192
           ++++ +           +  +   ++ ++   +  + Y         +G +Q  +A    
Sbjct: 115 ITHSHL--------GDYQGAIADFNQAIQLNPDFAAAYYNRGLARFNLGDDQGAIADYNQ 166

Query: 193 ------EVEIGRYYLKR-------GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                 +  I   Y  R       G+   AI  F   +    D  +          AY+ 
Sbjct: 167 AIKLNPDYAIA--YNNRGVARSNLGDDQGAIADFNQAIQRNPDNANVY---YNRGVAYLN 221

Query: 240 LALMDEARE---VVSLIQERYPQGYWARYVETLVK 271
           L    +A E     + + ++       +Y++ +++
Sbjct: 222 LGDQPKALEDFRQAATLFQQQGNTEIYQYIQQIIR 256


>gi|91772658|ref|YP_565350.1| TPR repeat-containing protein [Methanococcoides burtonii DSM 6242]
 gi|91711673|gb|ABE51600.1| Tetratricopeptide repeat protein [Methanococcoides burtonii DSM
           6242]
          Length = 1049

 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 35/111 (31%), Gaps = 17/111 (15%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           +   L  F  +A  F        +R                 E+ V  +    + KA E 
Sbjct: 6   FSLLLISFIILASSFPAQCMGYDARSFN--------------EEGVALMLNGTYDKAIEK 51

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           ++      P   +A +     A  QY  G Y +A +  +  +   P S  +
Sbjct: 52  YDLALVSDPNYRIALE---NKAAAQYLYGDYDEAIATYDHILKLQPGSPLI 99



 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 27/209 (12%), Positives = 62/209 (29%), Gaps = 34/209 (16%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D  Y+   +  A    K  N+  A + ++      P     + +LL         G Y+ 
Sbjct: 697 DSSYKDAWFALAQNVYKSSNYYYAIQAYDGLLNLDPEN---KTALLQKGQAYDKIGIYRS 753

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           + +   + +    ++      +YL G++   +           +  +    +++     +
Sbjct: 754 SLASYNKLLKVDTDNTE---AWYLRGLASYNL--------GNLEDAVYSYDKVLSSDPQN 802

Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
             V  A+  V                     G +  +I  +  VL    D       + +
Sbjct: 803 IDVLLAQSLVLE-----------------DLGLFEDSINNYDKVLEMKVDDPSV---LMK 842

Query: 233 LVEAYVALALMDEAREVVSLIQERYPQGY 261
               Y  L L  +A +   ++    P   
Sbjct: 843 KGNVYEKLGLYKDANDCYDIVLINEPANS 871



 Score = 35.5 bits (81), Expect = 8.6,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 34/90 (37%), Gaps = 7/90 (7%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
              L G   ++     L  V+D  Y+  +  KA       ++ +A   ++   +  P + 
Sbjct: 38  ALMLNGTYDKAIEKYDLALVSDPNYRIALENKAAAQYLYGDYDEAIATYDHILKLQPGSP 97

Query: 92  --VARKSLLMSAFVQYSAGKYQQAASLGEE 119
               +K ++++       G Y+ A    ++
Sbjct: 98  LIFTKKGMVLA-----KKGDYENAIKTYDK 122


>gi|110635498|ref|YP_675706.1| tetratricopeptide TPR_2 [Mesorhizobium sp. BNC1]
 gi|110286482|gb|ABG64541.1| Tetratricopeptide TPR_2 [Chelativorans sp. BNC1]
          Length = 334

 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 50/141 (35%), Gaps = 14/141 (9%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
            L G     + +  + ++       E+Y+ +  F+   ++  A   F Q    FP    A
Sbjct: 187 LLRGTPTGGTDNAVVAALPHSNNPEEIYQSSYQFILSGDYKTAEAGFRQYLDMFPEGEHA 246

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYI---TQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
             +            +Y++A    E ++    Q+P +     +   +G+S A M +    
Sbjct: 247 ADANFWLGEAMLGQDRYREA---AEVFLNANRQFPNASKSPEMLLKLGVSLAAMQQ---R 300

Query: 151 DQRATKLMLQYMSRIVERYTN 171
           D     +     + I  RY +
Sbjct: 301 D-----VACATYTEIGHRYPD 316



 Score = 44.0 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 36/120 (30%), Gaps = 19/120 (15%)

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           S  Q I    Y     K       + ++ +    +   A F++      L          
Sbjct: 216 SSYQFILSGDY-----KTAEAGFRQYLDMFPEGEHAADANFWLGEA--MLGQ-------- 260

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
                 Y  A   F      + +A  + E + +L  +  A+   D A    + I  RYP 
Sbjct: 261 ----DRYREAAEVFLNANRQFPNASKSPEMLLKLGVSLAAMQQRDVACATYTEIGHRYPD 316


>gi|222054405|ref|YP_002536767.1| chromosome segregation ATPase-like protein [Geobacter sp. FRC-32]
 gi|221563694|gb|ACM19666.1| chromosome segregation ATPase-like protein [Geobacter sp. FRC-32]
          Length = 1013

 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 28/73 (38%), Gaps = 1/73 (1%)

Query: 190 AAKEVEIGRYY-LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           A  ++ I  +   ++ +Y   + +   +L +Y D    + A+  L  A        EA  
Sbjct: 35  ADSQLFITGFNAYQKKDYQTTVDKMGTLLKSYPDTPLRDMAIFWLARANYKAGHKQEAAR 94

Query: 249 VVSLIQERYPQGY 261
            ++   + YP   
Sbjct: 95  YMAQFFKEYPDSP 107



 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 11/74 (14%), Positives = 30/74 (40%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
               +++       +++++    +      + +P   +   ++   A   Y AG  Q+AA
Sbjct: 34  SADSQLFITGFNAYQKKDYQTTVDKMGTLLKSYPDTPLRDMAIFWLARANYKAGHKQEAA 93

Query: 115 SLGEEYITQYPESK 128
               ++  +YP+S 
Sbjct: 94  RYMAQFFKEYPDSP 107


>gi|301167731|emb|CBW27315.1| putative membrane protein [Bacteriovorax marinus SJ]
          Length = 237

 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 28/80 (35%), Gaps = 1/80 (1%)

Query: 51  VTDVRYQREVYEKAVLFLKEQN-FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
            T     + +++  V   +  N +  A   F +    +P +   R S L  A      G 
Sbjct: 140 PTKKMDDQFLFQAGVAAFESGNHYDWAITNFEKLVEAYPTSEFYRGSKLWMALANLKIGN 199

Query: 110 YQQAASLGEEYITQYPESKN 129
             +  S  EE+  +Y  +  
Sbjct: 200 EDKFFSAAEEFRKKYRNTPE 219



 Score = 36.2 bits (83), Expect = 4.4,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 52/134 (38%), Gaps = 21/134 (15%)

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
               + +L  A  ++S   ++++A   + Y  Q+P  K  D   +  G++  +      +
Sbjct: 106 KWTPEQMLAVAKKEFSLKNFEKSAQFFDTYKHQFPTKKMDDQFLFQAGVAAFESGNHYDW 165

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
                   +    ++VE Y  S + +G++ ++ +         ++IG       ++ +A 
Sbjct: 166 -------AITNFEKLVEAYPTSEFYRGSKLWMALAN-------LKIG----NEDKFFSAA 207

Query: 211 PRFQLVLANYSDAE 224
             F+     Y +  
Sbjct: 208 EEFR---KKYRNTP 218


>gi|326528157|dbj|BAJ89130.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 698

 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 46/153 (30%), Gaps = 27/153 (17%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF----PFAGV-------ARKSL-LMSAF 102
               ++        KE     A   + +  R++    P           +R SL L  A 
Sbjct: 471 EEADKIKNTGNRLFKEGKLELAKAKYEKLLREYNHVHPQDDEEGKIFANSRSSLHLNVAA 530

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
                G+Y+++     + +   P         Y  GMSY        +D           
Sbjct: 531 CYRKMGEYRKSIEACNKVLDANPVHVK---ALYRRGMSYML---GGDFD-----DAKNDF 579

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
            ++V    +S     A   +   + +   +E+E
Sbjct: 580 EKMVTIDKSSE--PDATAALVKLKQK--EQEIE 608


>gi|326511970|dbj|BAJ95966.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 697

 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 46/153 (30%), Gaps = 27/153 (17%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF----PFAGV-------ARKSL-LMSAF 102
               ++        KE     A   + +  R++    P           +R SL L  A 
Sbjct: 470 EEADKIKNTGNRLFKEGKLELAKAKYEKLLREYNHVHPQDDEEGKIFANSRSSLHLNVAA 529

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
                G+Y+++     + +   P         Y  GMSY        +D           
Sbjct: 530 CYRKMGEYRKSIEACNKVLDANPVHVK---ALYRRGMSYML---GGDFD-----DAKNDF 578

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
            ++V    +S     A   +   + +   +E+E
Sbjct: 579 EKMVTIDKSSE--PDATAALVKLKQK--EQEIE 607


>gi|326508644|dbj|BAJ95844.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 350

 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 46/153 (30%), Gaps = 27/153 (17%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF----PFAGV-------ARKSL-LMSAF 102
               ++        KE     A   + +  R++    P           +R SL L  A 
Sbjct: 123 EEADKIKNTGNRLFKEGKLELAKAKYEKLLREYNHVHPQDDEEGKIFANSRSSLHLNVAA 182

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
                G+Y+++     + +   P         Y  GMSY        +D           
Sbjct: 183 CYRKMGEYRKSIEACNKVLDANPVHVK---ALYRRGMSYML---GGDFD-----DAKNDF 231

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
            ++V    +S     A   +   + +   +E+E
Sbjct: 232 EKMVTIDKSSE--PDATAALVKLKQK--EQEIE 260


>gi|300310075|ref|YP_003774167.1| lipoprotein [Herbaspirillum seropedicae SmR1]
 gi|300072860|gb|ADJ62259.1| lipoprotein [Herbaspirillum seropedicae SmR1]
          Length = 209

 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 33/106 (31%), Gaps = 9/106 (8%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            +  ++ +  L G    SS+    D   +         KA     E    +A       +
Sbjct: 10  LVIPALLLAVLSGCANTSSKPGPEDEAKNTLESGV--AKANAAQTEGKTDEAVSVLKVVA 67

Query: 85  RDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
             FP       R + +      + +G Y  A    +E + + P  K
Sbjct: 68  ARFPADKTPWVRIAQIR-----FDSGDYSDAIVNAQEALKRDPTDK 108


>gi|254285226|ref|ZP_04960191.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|150424498|gb|EDN16434.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
          Length = 254

 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 58/146 (39%), Gaps = 10/146 (6%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
              S+ +    + +    ++  Y+ AV   LK+++++ A   F +   D+P +  +  + 
Sbjct: 118 PTSSNDEAAQGTFSSDANEQAAYQNAVDLILKKRDYAGAIAAFQKFQTDYPNSTFSANAH 177

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
                + ++  +Y++AA      ++    +K  D       +     + D+       + 
Sbjct: 178 YWLGQLYFAKKEYKEAAKSFAAVVSDKGSNKRAD------ALV---KLGDIAKRNNNAEQ 228

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVT 183
             ++  + V+ Y +S   K A+  + 
Sbjct: 229 ARKFYQQAVDEYPDSASAKIAKENLK 254



 Score = 44.0 bits (103), Expect = 0.022,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 47/130 (36%), Gaps = 15/130 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            Q   D+   +R     +    +    Y NS +   A +++              G+ Y 
Sbjct: 140 YQNAVDLILKKRDYAGAIAAFQKFQTDYPNSTFSANAHYWL--------------GQLYF 185

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + EY  A   F  V+++   +    +A+ +L +        ++AR+      + YP   
Sbjct: 186 AKKEYKEAAKSFAAVVSD-KGSNKRADALVKLGDIAKRNNNAEQARKFYQQAVDEYPDSA 244

Query: 262 WARYVETLVK 271
            A+  +  +K
Sbjct: 245 SAKIAKENLK 254


>gi|109946831|ref|YP_664059.1| paralysed flagella protein [Helicobacter acinonychis str. Sheeba]
 gi|109714052|emb|CAJ99060.1| paralysed flagella protein [Helicobacter acinonychis str. Sheeba]
          Length = 794

 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 51/136 (37%), Gaps = 9/136 (6%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             +T   Y    Y +A   +  Q + +A    ++  +++P     +   L+        G
Sbjct: 180 PLLTTKGYDLNAYLEAKKQMDSQAYFEALRTISRAFKNYPQTIFKKDLYLLEIIALGKLG 239

Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            K      +G ++I  YP   N+  V Y V  +  +            K  +++  RI+ 
Sbjct: 240 IKKTLLIDIGTQWIKNYPADPNIPEVLYYVAKALDEN--------NNYKQAMRFYKRILL 291

Query: 168 RYTNSPYVKGARFYVT 183
            Y NS Y   A+ ++ 
Sbjct: 292 EYKNSRYAPLAQMHLA 307



 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 11/99 (11%), Positives = 30/99 (30%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
             + RA   +    ++   + L I     +                +   D      +Y 
Sbjct: 209 RTISRAFKNYPQTIFKKDLYLLEIIALGKLGIKKTLLIDIGTQWIKNYPADPNIPEVLYY 268

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
            A    +  N+ +A  ++ +   ++  +  A  + +  A
Sbjct: 269 VAKALDENNNYKQAMRFYKRILLEYKNSRYAPLAQMHLA 307


>gi|282895612|ref|ZP_06303746.1| hypothetical protein CRD_00245 [Raphidiopsis brookii D9]
 gi|281199452|gb|EFA74316.1| hypothetical protein CRD_00245 [Raphidiopsis brookii D9]
          Length = 461

 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 65/189 (34%), Gaps = 41/189 (21%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           ++ +   + +   +  R+ Y + +  L++ N+ ++    +Q  +  P    A  +     
Sbjct: 281 ATGEAPQERLNSPQSARDFYARGITKLEQFNYKESLADLDQAIKIDP--KYAE-AYFKRG 337

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL-----VGMSYAQMIRDVPYDQRATK 156
           +      +Y++A     + I   P         YL      G +Y  +  D        +
Sbjct: 338 YALSWLRRYEEALLDFNQVIALDPN--------YLDGYLNRGWTYIWLQND--------Q 381

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             L+  +R++    N  Y +            +A         Y+K G+Y AA+   +  
Sbjct: 382 AALEDFNRVIRINPN--YAE------AYAHQGMA---------YIKLGKYQAALESSKQA 424

Query: 217 LANYSDAEH 225
           +    +  +
Sbjct: 425 IRLDPNKSY 433


>gi|239787482|emb|CAX83953.1| Tetratricopeptide repeat protein [uncultured bacterium]
          Length = 943

 Score = 45.9 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 36/120 (30%), Gaps = 24/120 (20%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS-----LLMSAFVQYSAGKYQQAASLG 117
           +A +     +   A           P   +AR +     L   A V Y  G Y +A ++ 
Sbjct: 484 QARMAQARGDMPGAMAALELL----PETELARLANNPGHLKEVADVYYQNGNYSKALTVY 539

Query: 118 EEYITQYP----ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
             ++  YP     S           +  A   R      +        + ++   + +SP
Sbjct: 540 IRFLESYPLDAARSPW--------ALLNAAQCR---RQLKQYDSARNLLKQLSREFPDSP 588



 Score = 43.6 bits (102), Expect = 0.027,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 61/222 (27%), Gaps = 55/222 (24%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK-SLLMSAFVQYSA 107
           D          + E+A   +   ++  A  + NQ           R  + LM A +  + 
Sbjct: 432 DPNLPKNSPEVLMERARASMGLADWENATTFLNQIFDTPAAGDYLRGWARLMQARMAQAR 491

Query: 108 GKYQQAASLGE--------EYITQYPES-KNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
           G    A +  E          +   P   K V  VYY  G                    
Sbjct: 492 GDMPGAMAALELLPETELAR-LANNPGHLKEVADVYYQNG---------------NYSKA 535

Query: 159 LQYMSRIVERYT-NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
           L    R +E Y  ++     A       R QL               +Y +A    + + 
Sbjct: 536 LTVYIRFLESYPLDAARSPWALLNAAQCRRQL--------------KQYDSARNLLKQLS 581

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
             + D+         +   Y ++ L DE           YP+
Sbjct: 582 REFPDSPA-----HAMGRIY-SVQLQDE--------DPNYPE 609



 Score = 42.0 bits (98), Expect = 0.093,   Method: Composition-based stats.
 Identities = 34/264 (12%), Positives = 75/264 (28%), Gaps = 72/264 (27%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA------ 113
            +  A    ++++F+KA  Y       FP                Y       A      
Sbjct: 335 YFRNAQDAEQKRDFAKARAYLKSLLDVFPETPNRELV------AYYRT---TLARRMDWK 385

Query: 114 ----ASLGEEYITQYPESKNVDYV--YYLVGMSY---AQMIRDVPYDQRATKLMLQYMSR 164
                   + ++  +P + N   +  + L  ++     +    + +D    K   + +  
Sbjct: 386 PGWLLKEYDNFLAHFPNNFNYPKMRLWQLQALNDGGQFEAALGLMWDPNLPKNSPEVLME 445

Query: 165 -----------------IVERYTNSPYVKG--------ARFYVTVGRN----QLAAKEV- 194
                            + + + ++P             +  +   R      +AA E+ 
Sbjct: 446 RARASMGLADWENATTFLNQIF-DTPAAGDYLRGWARLMQARMAQARGDMPGAMAALELL 504

Query: 195 ----------------EIGRYYLKRGEYVAAIPRFQLVLANYS-DAEHAEEAMARLVEAY 237
                           E+   Y + G Y  A+  +   L +Y  DA  +  A+    +  
Sbjct: 505 PETELARLANNPGHLKEVADVYYQNGNYSKALTVYIRFLESYPLDAARSPWALLNAAQCR 564

Query: 238 VALALMDEAREVVSLIQERYPQGY 261
             L   D AR ++  +   +P   
Sbjct: 565 RQLKQYDSARNLLKQLSREFPDSP 588


>gi|153005970|ref|YP_001380295.1| hypothetical protein Anae109_3115 [Anaeromyxobacter sp. Fw109-5]
 gi|152029543|gb|ABS27311.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp.
           Fw109-5]
          Length = 308

 Score = 45.9 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 43/110 (39%), Gaps = 14/110 (12%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           Q    +  +   + V ++   P    A F +          E+  G        Y  A+ 
Sbjct: 189 QGNKTVARELYEQYVAQFPADPASAEAHFRLG---------ELAFGE-----RRYRDAVL 234

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            F  V   +  +  A +A+ R  EA + L + +EA+ V+S + +RYP   
Sbjct: 235 EFGKVAREFPRSGKAPDALVRTGEAMLQLDMREEAKTVLSEVPQRYPGTP 284



 Score = 40.9 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 36/127 (28%), Gaps = 22/127 (17%)

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
           L  A  Q   G    A  L E+Y+ Q+P        ++ +G        ++ + +R  + 
Sbjct: 180 LALARAQEQQGNKTVARELYEQYVAQFPADPASAEAHFRLG--------ELAFGERRYRD 231

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
            +    ++   +  S     A         QL  +E               A      V 
Sbjct: 232 AVLEFGKVAREFPRSGKAPDALVRTGEAMLQLDMRE--------------EAKTVLSEVP 277

Query: 218 ANYSDAE 224
             Y    
Sbjct: 278 QRYPGTP 284


>gi|92118968|ref|YP_578697.1| TPR repeat-containing protein [Nitrobacter hamburgensis X14]
 gi|91801862|gb|ABE64237.1| TPR repeat protein [Nitrobacter hamburgensis X14]
          Length = 336

 Score = 45.9 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/129 (13%), Positives = 29/129 (22%), Gaps = 22/129 (17%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
                        Y  A      +  +YP         Y +G S  Q  +         +
Sbjct: 215 EFDLGIGYMQRKDYALAEETMRNFTQKYPSDALTGDAQYWLGESLFQRQK--------YR 266

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              +    +  ++ +S     A   +      L  KE              AA      V
Sbjct: 267 EAAEAFLGVTTKFDSSAKASDALLRLGQSLAALKEKE--------------AACAALGEV 312

Query: 217 LANYSDAEH 225
              Y  A  
Sbjct: 313 TRKYPRASA 321



 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 41/110 (37%), Gaps = 14/110 (12%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           ++   L  + M    ++Y +      A++++                   +R +Y  A  
Sbjct: 225 RKDYALAEETMRNFTQKYPSDALTGDAQYWLGESL--------------FQRQKYREAAE 270

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            F  V   +  +  A +A+ RL ++  AL   + A   +  +  +YP+  
Sbjct: 271 AFLGVTTKFDSSAKASDALLRLGQSLAALKEKEAACAALGEVTRKYPRAS 320


>gi|20141804|sp|Q60676|PPP5_MOUSE RecName: Full=Serine/threonine-protein phosphatase 5; Short=PP5;
           AltName: Full=Protein phosphatase T; Short=PPT
 gi|2407637|gb|AAB70573.1| protein phosphatase 5 [Mus musculus]
 gi|13277678|gb|AAH03744.1| Protein phosphatase 5, catalytic subunit [Mus musculus]
          Length = 499

 Score = 45.9 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 50/165 (30%), Gaps = 33/165 (20%)

Query: 38  WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARK 95
                  +   D    ++   E+  +A  + K +++  A ++++Q     P        +
Sbjct: 11  CAETPRDEPPADGA--LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPGNAIYYGNR 68

Query: 96  SLLMSAF----VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
           S    A+       Y+ G   +A  L ++YI            YY    S   +      
Sbjct: 69  S---LAYLRTECYGYALGDATRAIELDKKYIK----------GYYRRAASNMAL------ 109

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
                +  L+    +V+   N      A+         +  K  E
Sbjct: 110 --GKFRAALRDYETVVKVKPNDK---DAKMKYQECSKIVKQKAFE 149


>gi|307152867|ref|YP_003888251.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC
           7822]
 gi|306983095|gb|ADN14976.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7822]
          Length = 846

 Score = 45.9 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 35/255 (13%), Positives = 77/255 (30%), Gaps = 47/255 (18%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEK----AVLFLKEQNFSKAYEYFNQCSRDFPF 89
            L  W  +       + +  ++   + Y             +N++ A + +N+     P 
Sbjct: 342 GLTLWFTRDLSQSAQEFIHAIQQDDQFYSAWRWLGYDLFLMRNYTDALKVYNKLFEMNPK 401

Query: 90  AG---VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
                   +  +  A+     G YQ+A +   + I   P      + Y   G++Y+++  
Sbjct: 402 GDFVLYTERGSV-LAYS----GHYQEAIADYNKAIELKP-HP---WAYNKRGLAYSEL-- 450

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYV----KGARFYVTVGRNQLAAKEVEI------ 196
                    +  +   ++ +E   ++ Y           +      LA     I      
Sbjct: 451 ------EEYQKAIADFNKTIELEPDADYAYNNRGNVYKDLKDYDKALADYNKAISYNYVG 504

Query: 197 -----GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR--LVEAYVALALMDEA-RE 248
                G  YL   EY  A+  F   +        +E ++        Y  L    +A  +
Sbjct: 505 AYNNRGNLYLDLKEYQKALADFNKGIE-----IDSENSLLYGNRGRVYSELKDYKKAFDD 559

Query: 249 VVSLIQERYPQGYWA 263
               I+    Q ++ 
Sbjct: 560 YSKAIEINPNQSFYY 574


>gi|162453783|ref|YP_001616150.1| hypothetical protein sce5507 [Sorangium cellulosum 'So ce 56']
 gi|161164365|emb|CAN95670.1| putative membrane protein [Sorangium cellulosum 'So ce 56']
          Length = 258

 Score = 45.9 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 33/87 (37%), Gaps = 2/87 (2%)

Query: 43  SRDVYLDSVTDVRYQREV--YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
           ++     S T    + E+   + A   L   N   A    +  SR  P   ++ ++ ++ 
Sbjct: 160 TKLDPKPSGTGAALEAELGALDAARTMLASGNARGALSLLDAYSRTHPRGRLSLEAEVLR 219

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPES 127
                 +G+   A+     ++ ++P S
Sbjct: 220 IDALAKSGRSDAASQRAAAFLRRHPNS 246


>gi|298207339|ref|YP_003715518.1| hypothetical protein CA2559_03770 [Croceibacter atlanticus
           HTCC2559]
 gi|83849975|gb|EAP87843.1| hypothetical protein CA2559_03770 [Croceibacter atlanticus
           HTCC2559]
          Length = 593

 Score = 45.9 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 54/145 (37%), Gaps = 13/145 (8%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           +D  L+  T    ++  + KA L   +     A     +         +  ++LL  A +
Sbjct: 455 KDNSLEDSTQTALKK--FAKADLLTFKGKNEAAIAVLEEILIQHKGEKIEDEALLRQANL 512

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK--LMLQY 161
              A ++++A +  ++ IT YP     D  YY  G++         YD+   +       
Sbjct: 513 FIEAKEFEKAEANYKKIITFYPTDILGDDAYY--GLAKL-------YDEHLARPEDAKAN 563

Query: 162 MSRIVERYTNSPYVKGARFYVTVGR 186
             +++  Y +S +   AR      R
Sbjct: 564 YEKVIFDYADSIFYVDARKRYRTLR 588


>gi|310779067|ref|YP_003967400.1| TPR repeat-containing protein [Ilyobacter polytropus DSM 2926]
 gi|309748390|gb|ADO83052.1| TPR repeat-containing protein [Ilyobacter polytropus DSM 2926]
          Length = 948

 Score = 45.9 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 63/187 (33%), Gaps = 29/187 (15%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
            V    Y + +YE    + K   ++KA    ++            + +L  A   Y+ G+
Sbjct: 124 DVKSEYYDKAIYELGKEYYKSGEYNKAQTELSKLLSSK--GNYYDEGILYLALSSYNNGQ 181

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y ++    +EY     E KN   + Y+ G  Y +M                Y   +   Y
Sbjct: 182 YVKSIVYLDEYYNGTEEDKNYPLMNYIYGSCYYKMDD--------IAKAEGYFKEVAANY 233

Query: 170 TNSPYVKGARFYVTVG-RNQLAAKEVE------------------IGRYYLKRGEYVAAI 210
             + Y + +   +    R+     E+                   +  Y L +G+Y ++ 
Sbjct: 234 PENTYAQRSLLSLVSIYRDMKNEAEMMNAVARLKKGKEANTAYKLVAEYNLNKGDYSSSA 293

Query: 211 PRFQLVL 217
             ++ ++
Sbjct: 294 EYYEKIV 300


>gi|260592517|ref|ZP_05857975.1| putative BatD protein [Prevotella veroralis F0319]
 gi|260535563|gb|EEX18180.1| putative BatD protein [Prevotella veroralis F0319]
          Length = 854

 Score = 45.9 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 16/132 (12%), Positives = 36/132 (27%), Gaps = 25/132 (18%)

Query: 1   MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
           M A+      I +A   +     +  F  IA+  L       ++              ++
Sbjct: 586 MEAISDMEETIKKAKVQKSKNNNILSFLIIALLALPIHAFSQTKSDV----------DKL 635

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGE 118
           Y       ++ N+++A + + +             + L        Y       A    E
Sbjct: 636 Y-------QKGNYAQAVKGYEKLLEQ------GESAALYYNLGDCYYRLDNIPHAVLAYE 682

Query: 119 EYITQYPESKNV 130
                 P   ++
Sbjct: 683 RAQRLAPSDDDI 694


>gi|219849677|ref|YP_002464110.1| tetratricopeptide repeat-containing protein [Chloroflexus aggregans
           DSM 9485]
 gi|219543936|gb|ACL25674.1| Tetratricopeptide TPR_2 repeat protein [Chloroflexus aggregans DSM
           9485]
          Length = 1838

 Score = 45.9 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 66/201 (32%), Gaps = 26/201 (12%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           ++ Y +A  FL+     +A           P    A++          +      A +  
Sbjct: 7   QDAYTQARTFLEANQIEQAIGLTQHILTYHPDNLEAQRI---LGEAYLAQRDLSAAIATF 63

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           E+ +   P  +N+   +  +GM+Y          Q      +    + +E   + P ++ 
Sbjct: 64  EQVLQADP--ENIP-AHVGLGMAYEW--------QGRLDKAIAEFEQALEIRPDMPELRA 112

Query: 178 ARFYV-------TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
               +            +L+   +   R Y +      AI  F+  +  + +     +A 
Sbjct: 113 QLVRLYTEAWGSEHAALRLSRSGL--ARLYARGYMLPQAINEFKHFITEHPE---RLDAW 167

Query: 231 ARLVEAYVALALMDEAREVVS 251
             L+EA    + +DEA E   
Sbjct: 168 VGLIEALWRHSQLDEAAETCR 188


>gi|240080649|ref|ZP_04725192.1| hypothetical protein NgonF_04952 [Neisseria gonorrhoeae FA19]
 gi|240123590|ref|ZP_04736546.1| hypothetical protein NgonP_06559 [Neisseria gonorrhoeae PID332]
 gi|268596773|ref|ZP_06130940.1| periplasmic protein [Neisseria gonorrhoeae FA19]
 gi|268682218|ref|ZP_06149080.1| periplasmic protein [Neisseria gonorrhoeae PID332]
 gi|268550561|gb|EEZ45580.1| periplasmic protein [Neisseria gonorrhoeae FA19]
 gi|268622502|gb|EEZ54902.1| periplasmic protein [Neisseria gonorrhoeae PID332]
          Length = 237

 Score = 45.9 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 43/125 (34%), Gaps = 11/125 (8%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S   V   + +Y +A+   +   FS A               +A++S+ +    +   G 
Sbjct: 111 SAHTVETAQNLYNQALKHYQNGRFSAAAALLKGADGGD-GGSIAQRSMYLLLQSRARMGN 169

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVER 168
            +    +G  Y  ++ +S     V + +G    +   +D+                +++ 
Sbjct: 170 CESVIEIGGRYANRFKDSPTAPEVIFKIGECQYRLQQKDIAR---------ATWRSLIQT 220

Query: 169 YTNSP 173
           Y  SP
Sbjct: 221 YPGSP 225


>gi|194367003|ref|YP_002029613.1| TPR repeat-containing protein [Stenotrophomonas maltophilia R551-3]
 gi|194349807|gb|ACF52930.1| TPR repeat-containing protein [Stenotrophomonas maltophilia R551-3]
          Length = 612

 Score = 45.9 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/65 (15%), Positives = 19/65 (29%), Gaps = 8/65 (12%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
              V   +  +F+ A + F     D              A      G Y +A +  +  +
Sbjct: 372 ADGVQAYRNGDFASARKQFEGIDNDA--GWY------NLANALARQGNYDEAIAAYDRAL 423

Query: 122 TQYPE 126
             +P 
Sbjct: 424 ALHPG 428


>gi|303235663|ref|ZP_07322270.1| tetratricopeptide repeat protein [Prevotella disiens FB035-09AN]
 gi|302484110|gb|EFL47098.1| tetratricopeptide repeat protein [Prevotella disiens FB035-09AN]
          Length = 858

 Score = 45.9 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 24/69 (34%), Gaps = 4/69 (5%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           E A     + N+++A + + +   + P A +           QY A     A    E  +
Sbjct: 634 EDAAKAYDKGNYTEAAKIYQRLIEENPSAAL----YYNLGNAQYRANDITHAILSYERAL 689

Query: 122 TQYPESKNV 130
              P  ++ 
Sbjct: 690 KLRPSDEDA 698


>gi|254785745|ref|YP_003073174.1| tetratricopeptide repeat domain-containing protein [Teredinibacter
           turnerae T7901]
 gi|237684440|gb|ACR11704.1| tetratricopeptide repeat domain protein [Teredinibacter turnerae
           T7901]
          Length = 933

 Score = 45.9 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 59/181 (32%), Gaps = 23/181 (12%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y +A       + + A   FN+ S   P + +A  +L  +A +      +Q A    E+
Sbjct: 590 IYRQAENARDTGDTALAQNLFNRVSDTIPGSELAPTALYDAASLALKDKSWQAAIFFLEK 649

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
             + YP  K             ++ +     + + T         +     NS       
Sbjct: 650 LQSNYPRQKY--------AKETSRQLSVAYLNAKQTDKAASQFEALA----NSDDTNEV- 696

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD-AEHAEEAMARLVEAYV 238
             +T           +  + Y ++     AI  ++    NY +      EAM RL + Y 
Sbjct: 697 -KMTAL--------WQAAQLYDEKKNTAGAIRSYRDYAHNYREPYPQNIEAMYRLTQLYE 747

Query: 239 A 239
            
Sbjct: 748 E 748



 Score = 42.4 bits (99), Expect = 0.072,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 30/63 (47%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
               +Y+ A L LK++++  A  +  +   ++P    A+++    +    +A +  +AAS
Sbjct: 623 APTALYDAASLALKDKSWQAAIFFLEKLQSNYPRQKYAKETSRQLSVAYLNAKQTDKAAS 682

Query: 116 LGE 118
             E
Sbjct: 683 QFE 685


>gi|150400673|ref|YP_001324439.1| TPR repeat-containing protein [Methanococcus aeolicus Nankai-3]
 gi|150013376|gb|ABR55827.1| Tetratricopeptide TPR_2 repeat protein [Methanococcus aeolicus
           Nankai-3]
          Length = 554

 Score = 45.9 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 45/130 (34%), Gaps = 12/130 (9%)

Query: 62  EKAVLFLKEQNFSKAYE-YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
                +L  +++  A + Y+N  +++        K+    A+  Y  G Y+ +     E 
Sbjct: 23  SDGNNYLDVKDYKNAADCYYNALNKN----PNDDKAWYSMAYALYKLGDYKASFDAINEA 78

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL-----MLQYMSRIVERYTNSPYV 175
           +    ++    Y +YL G  Y  + R +  D+          + +  + +   Y  +   
Sbjct: 79  LKLNQDNP-TKY-HYLKGSIYYALGRYIDEDESYNLEDNKSYLEEAFTNLNSYYEQNRQN 136

Query: 176 KGARFYVTVG 185
             A   +   
Sbjct: 137 TSALIKMGKI 146


>gi|16753067|ref|NP_444631.1| hypothetical protein CP0079 [Chlamydophila pneumoniae AR39]
 gi|8163361|gb|AAF73626.1| conserved hypothetical protein [Chlamydophila pneumoniae AR39]
          Length = 318

 Score = 45.9 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 53/150 (35%)

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
             A   +++    FP   +  ++L   A +        +A    ++   Q+P        
Sbjct: 151 EDALRIYDEILTAFPSKDLGAQALYSKAALLIVKNDLTEATKTLKKLTLQFPLHILSSEA 210

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
           +  +   Y Q  +  P++ +           + +++ N P  +     V   R   A   
Sbjct: 211 FVRLSEIYLQQAKKEPHNLQYLHFAKLNEEAMKKQHPNHPMNEVVSANVGAMREHYARGL 270

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
              GR+Y K+ +  AA   ++  + NY D 
Sbjct: 271 YATGRFYEKKKKAEAANIYYRTAITNYPDT 300



 Score = 40.1 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 72/228 (31%), Gaps = 45/228 (19%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
              E + +   FLK+ NF KA   F   +  FP   +  ++  +     ++      A  
Sbjct: 42  SAEEYFSQGQEFLKKGNFRKALLCFGIITHHFPRDILRNQAQYLIGVCYFTQDHPDLADK 101

Query: 116 LGEEYITQYPESKNVDY------VYYLVGMSYAQ-------MIRDVPYDQRATKLMLQYM 162
               Y+       + +Y      + Y +   +AQ        +   P    A +  L+  
Sbjct: 102 AFASYLQL----PDAEYSEELFQMKYAIAQRFAQGKRKRICRLEGFPKLMNADEDALRIY 157

Query: 163 SRIVERYTNSPYVKGA---RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
             I+  + +      A   +  + + +N L                   A    + +   
Sbjct: 158 DEILTAFPSKDLGAQALYSKAALLIVKNDLTE-----------------ATKTLKKLTLQ 200

Query: 220 YSDAEHAEEAMARLVEAYVA--------LALMDEAREVVSLIQERYPQ 259
           +     + EA  RL E Y+         L  +  A+     +++++P 
Sbjct: 201 FPLHILSSEAFVRLSEIYLQQAKKEPHNLQYLHFAKLNEEAMKKQHPN 248


>gi|134117023|ref|XP_772738.1| hypothetical protein CNBK1120 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255356|gb|EAL18091.1| hypothetical protein CNBK1120 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 1101

 Score = 45.9 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 46/139 (33%), Gaps = 22/139 (15%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108
           TD    +  Y     ++  Q ++KAYE + Q        P              + Y   
Sbjct: 369 TDPSDAQSWYLLGRAYMAAQRYNKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIA 422

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +Y+ A       I   P    +  V+Y +G S  +   +   D       +   SR +E 
Sbjct: 423 QYRDALDAYSRAIRLNP---YISEVWYNLG-SLYESCNNQMAD------AMDAYSRALEL 472

Query: 169 YTNSPYVKGARFYVTVGRN 187
             N+      +  + + +N
Sbjct: 473 DPNN---TVIKQRMALLQN 488


>gi|322435642|ref|YP_004217854.1| Lytic transglycosylase catalytic [Acidobacterium sp. MP5ACTX9]
 gi|321163369|gb|ADW69074.1| Lytic transglycosylase catalytic [Acidobacterium sp. MP5ACTX9]
          Length = 781

 Score = 45.5 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 47/135 (34%), Gaps = 7/135 (5%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                 +  +Y    ++L   + ++A  ++    + FP +  A  +    A++ Y   +Y
Sbjct: 390 PNSRWTEEALYSGGNMYLLTHDSTQALYHYGLLVQHFPNSTYAPSAHWRMAWMNYRLRRY 449

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
            +AA L +E + +Y          Y  G  Y    +D             Y   +   Y 
Sbjct: 450 PEAARLMDEQVVRYAAGTEASSALYWRGRIYEDEEKDFG-------QAANYYRALSANYN 502

Query: 171 NSPYVKGARFYVTVG 185
           N  Y   AR  + V 
Sbjct: 503 NFYYGVLARQRLAVI 517



 Score = 38.9 bits (90), Expect = 0.70,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 34/137 (24%), Gaps = 23/137 (16%)

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
           YP S+  +   Y  G  Y                 L +   +V+ + NS Y   A + + 
Sbjct: 389 YPNSRWTEEALYSGGNMYLLTHDST--------QALYHYGLLVQHFPNSTYAPSAHWRMA 440

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY-VALAL 242
                             +   Y  A       +  Y+    A  A+      Y      
Sbjct: 441 WMN--------------YRLRRYPEAARLMDEQVVRYAAGTEASSALYWRGRIYEDEEKD 486

Query: 243 MDEAREVVSLIQERYPQ 259
             +A      +   Y  
Sbjct: 487 FGQAANYYRALSANYNN 503



 Score = 35.9 bits (82), Expect = 5.8,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 20/54 (37%)

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
            ++  Y ++   EEA+      Y+      +A     L+ + +P   +A     
Sbjct: 384 QMVDKYPNSRWTEEALYSGGNMYLLTHDSTQALYHYGLLVQHFPNSTYAPSAHW 437


>gi|226505390|ref|NP_001150042.1| serine/threonine-protein phosphatase 5 [Zea mays]
 gi|195636270|gb|ACG37603.1| serine/threonine-protein phosphatase 5 [Zea mays]
          Length = 483

 Score = 45.5 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 43/140 (30%), Gaps = 29/140 (20%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCS---RDFPFAGVARKSLLMSAFVQYSA 107
           +DV+   E   KA    K   FS+A E +         +  +   A ++     F     
Sbjct: 7   SDVQRAEEFKLKANDAFKANKFSQAIELYSQAIELNSSNAVY--WANRA-----FAHTKL 59

Query: 108 GKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
            +Y  A     + I       +  Y   YY  G +Y  M           K  L+   ++
Sbjct: 60  EEYGSAVQDATKAIEI-----DSRYSKGYYRRGAAYLAM--------GKFKEALKDFQQV 106

Query: 166 VERYTNSPYVKGARFYVTVG 185
            +   N P    A   +   
Sbjct: 107 KKICPNDP---DATRKLKEC 123


>gi|118588323|ref|ZP_01545732.1| hypothetical protein SIAM614_23617 [Stappia aggregata IAM 12614]
 gi|118439029|gb|EAV45661.1| hypothetical protein SIAM614_23617 [Stappia aggregata IAM 12614]
          Length = 315

 Score = 45.5 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/133 (12%), Positives = 40/133 (30%), Gaps = 14/133 (10%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           ++ D  + +V         Y +A  F    +++ A   F      +P    A  +     
Sbjct: 175 ATDDDQIANVIGSGDPSSDYNQAYSFAVNGDYAAAERGFRNFLETYPDDAQAANAQYWLG 234

Query: 102 FVQYSAGKYQQAASLGEEYITQ---YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
               +   Y++A    + ++     +P +         +G+S                  
Sbjct: 235 ESLLAQQNYREA---ADAFLKTYTDHPGNAKSPDSLLKLGVSL--------RGLGEADAA 283

Query: 159 LQYMSRIVERYTN 171
               S ++ +Y N
Sbjct: 284 CATFSELLSKYPN 296



 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 36/136 (26%), Gaps = 28/136 (20%)

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
           P +          A+     G Y  A      ++  YP+        Y +G S       
Sbjct: 190 PSSDY------NQAYSFAVNGDYAAAERGFRNFLETYPDDAQAANAQYWLGESLLA---- 239

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
               Q+  +       +    +  +     +   + V    L   +              
Sbjct: 240 ----QQNYREAADAFLKTYTDHPGNAKSPDSLLKLGVSLRGLGEAD-------------- 281

Query: 208 AAIPRFQLVLANYSDA 223
           AA   F  +L+ Y +A
Sbjct: 282 AACATFSELLSKYPNA 297


>gi|120609659|ref|YP_969337.1| hypothetical protein Aave_0965 [Acidovorax citrulli AAC00-1]
 gi|120588123|gb|ABM31563.1| TPR repeat-containing protein [Acidovorax citrulli AAC00-1]
          Length = 1084

 Score = 45.5 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 50/166 (30%), Gaps = 16/166 (9%)

Query: 22   FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
            FAL +F +    F  G  +    +       D   +  +  +A   +    F  A   F 
Sbjct: 935  FALGLFAAAYDSFNTGMAQAG--EGVSGKDMDRIREAMLLRRAESAIGANRFDDALRDFA 992

Query: 82   QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
               +  P +   ++  L +   Q   G  Q A +   + +     + N    YY   M+Y
Sbjct: 993  TLQKMNPQS---QRVALGTGMAQVGKGDVQAAIATFNQILA---RTPNAAVAYYGRAMAY 1046

Query: 142  AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
                             L+ + R +     +P     R  +   R 
Sbjct: 1047 --------RAAGKLDDSLKDLDRAIALDPRNPQYPQVRAQIAAARK 1084


>gi|77920692|ref|YP_358507.1| TPR repeat-containing protein [Pelobacter carbinolicus DSM 2380]
 gi|77546775|gb|ABA90337.1| TPR repeat protein [Pelobacter carbinolicus DSM 2380]
          Length = 313

 Score = 45.5 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/248 (13%), Positives = 67/248 (27%), Gaps = 64/248 (25%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQC--SRDFPF-------------AGVA------RKSL-- 97
           Y   +    + +  +A + F         PF               +A      +++L  
Sbjct: 66  YYIGLALYDQGDLPRAIKAFRAALAESREPFRILFKLGLAQYGLGDLAASVASFKQALQV 125

Query: 98  --------LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
                                +QA +  ++ I   P+        +++GM Y+Q      
Sbjct: 126 NPASAETCYRLGLSYLRQSDLEQARAALDDAIRLNPKYTR---ALFILGMIYSQ------ 176

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYV----KGARFYVTVGRNQLAAKE--------VEIG 197
             Q      ++   ++ +   +          A           A  E            
Sbjct: 177 --QGNPTEAIRLFRQVEQASPDYTEACFELGMALLRNGELDEAAAQFEKTTVNSPRFTPA 234

Query: 198 RYYL-----KRGEYVAAIPRFQLVLANYS-DAEHAEEAMARLVEAYVALALMDEAREVVS 251
            + L     + G+   AI  ++  L     D     E    L E    L   D ARE + 
Sbjct: 235 HFMLGEARRRAGKLSEAISAYRQALEQNPRDT----EGWLHLAECQARLGQTDAAREALD 290

Query: 252 LIQERYPQ 259
            +   +P+
Sbjct: 291 KVLSLHPE 298


>gi|220906436|ref|YP_002481747.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC
           7425]
 gi|219863047|gb|ACL43386.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425]
          Length = 219

 Score = 45.5 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/168 (10%), Positives = 47/168 (27%), Gaps = 21/168 (12%)

Query: 10  CIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDV-RYQREVYEKAVLFL 68
           C+       +    +T    +            + ++   +  D  R   + +      L
Sbjct: 16  CLLPMLGTAIALATVTAISPVQAALSPAVSSPETPNLPATNPPDSLRNANDYFNTGNDHL 75

Query: 69  KEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
           ++ N++ A   + Q  +  P        +  + +       G Y  A +  ++ I   P 
Sbjct: 76  QQGNYAAAVTDYTQALQRNPNFVEAYTNRGTVRTI-----QGDYPGAIADFDQAIRIDPN 130

Query: 127 SKNVDYVYYLVGMSYAQMIRDVPY-DQRATKLMLQYMSRIVERYTNSP 173
           + +  Y             R      Q      +   ++ +    + P
Sbjct: 131 N-STAYA-----------NRGTTRTIQGNFPEAIADFTQAIRLNPSDP 166


>gi|77165454|ref|YP_343979.1| TPR repeat-containing protein [Nitrosococcus oceani ATCC 19707]
 gi|76883768|gb|ABA58449.1| TPR repeat protein [Nitrosococcus oceani ATCC 19707]
          Length = 934

 Score = 45.5 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 76/201 (37%), Gaps = 39/201 (19%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
            +   + ++  L +++     A   F +  +  P +    + ++  A  Q  AG   ++ 
Sbjct: 712 EHPEVLAQEGWLAMRQNRPQDAIIAFREALKRSPTS----QIIVNLAHAQLQAGNQNESL 767

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
           +  E+++ ++P  +++  V Y +   Y  + ++        +      + +V+R  ++  
Sbjct: 768 ATLEDWLKKHP--EDMV-VQYNLANLYLALKQE--------QKAASAFTTVVKRAPDN-- 814

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
                    V  N LA        + L++ +   A+   +  L    +A    + +  L 
Sbjct: 815 --------VVALNNLA--------WLLRKNDPAKALEYAERALELAPNAPPVMDTLGML- 857

Query: 235 EAYVALALMDEAREVVSLIQE 255
                L    EA+  + L+++
Sbjct: 858 -----LLEKGEAKRSLRLLRK 873



 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 29/71 (40%), Gaps = 3/71 (4%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y + +L  ++Q ++ A   F +     P       ++  +    Y  G+  QA  L  ++
Sbjct: 276 YAQGLLHFQQQQYADALTSFQKTLSKNP--EYMP-AVFYAGIAYYQQGQLTQAGQLLNQF 332

Query: 121 ITQYPESKNVD 131
           + ++P S    
Sbjct: 333 LKRFPHSDTAA 343



 Score = 36.2 bits (83), Expect = 4.4,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 45/135 (33%), Gaps = 17/135 (12%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
             + + ++   ++A +  NQ  + FP +  A K+L M    +   G Y  A ++ E  I 
Sbjct: 312 AGIAYYQQGQLTQAGQLLNQFLKRFPHSDTAAKTLAMI---RLREGNYTSAQAILEPIIA 368

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
           Q P                  ++      Q   +    Y  ++  +   S     A   +
Sbjct: 369 QNPNDTAA-----------LDLLGSAILGQGKPEKSAAYFQKVTAQTPES---AAAYMKL 414

Query: 183 TVGRNQLAAKEVEIG 197
            +G       E  IG
Sbjct: 415 GLGFMMSGEHEQGIG 429


>gi|45656035|ref|YP_000121.1| hypothetical protein LIC10125 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45599268|gb|AAS68758.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 1197

 Score = 45.5 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 54/146 (36%), Gaps = 10/146 (6%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVAR 94
            G ++ S  +    +  D   +   Y   ++   +  +++A   F +  +  P F+    
Sbjct: 757 SGNKKLSKEEFEAATQQDAANELAPYNIGIILFNDNLYNEAIGIFKEIIQKNPEFSD--- 813

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
            +    +++ Y  G  +QA     + +       N+ +   +  +S     R+   +   
Sbjct: 814 -AHYQISYIYYKRGDLEQAEKEIRKALDLERNEGNL-FAL-IRILS---EQRNKMANPAI 867

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARF 180
            K +L     + E++ +SP+   A  
Sbjct: 868 KKEVLDLGRELAEKFPSSPHAAQAER 893


>gi|332705272|ref|ZP_08425353.1| TPR repeat-containing protein [Lyngbya majuscula 3L]
 gi|332356015|gb|EGJ35474.1| TPR repeat-containing protein [Lyngbya majuscula 3L]
          Length = 346

 Score = 45.5 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 71/204 (34%), Gaps = 32/204 (15%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E Y + V  L   N+ +A   F Q  +  P+            +V +  G YQ+A     
Sbjct: 129 EFYNRGVDQLDNGNYPEAMANFKQALQLEPYDP---DINYNLGYVHHIQGNYQEAIDNYT 185

Query: 119 EYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP--Y 174
             I         DY   Y   G +Y    + +          +   S+ +    ++   Y
Sbjct: 186 AAIKI-----KTDYGEAYSNRGYAYFVQKKFI--------EAIADFSKAIALTPDNDTVY 232

Query: 175 VKGARFY--VTVGRNQLAAKE--VEI----GRYYLKRGEYVAAIPRFQLVLANYSDA--- 223
           +     Y  V      +A  +  + I       Y +RG   + + ++Q  +A+Y++    
Sbjct: 233 LSRGNAYSEVDNYFQAIADYDRALSINPKNAMAYYQRGLTRSKLKQYQAAVADYTETLKI 292

Query: 224 -EHAEEAMARLVEAYVALALMDEA 246
                +A  +   A + L  ++EA
Sbjct: 293 EPTFADAFYKRGLARLDLNKVEEA 316


>gi|326335004|ref|ZP_08201204.1| TPR repeat-containing protein [Capnocytophaga sp. oral taxon 338
           str. F0234]
 gi|325692809|gb|EGD34748.1| TPR repeat-containing protein [Capnocytophaga sp. oral taxon 338
           str. F0234]
          Length = 250

 Score = 45.5 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/81 (12%), Positives = 26/81 (32%), Gaps = 7/81 (8%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            E++ +A      +++  A + + +          +       A   Y  G    +    
Sbjct: 22  EELFAQAGSAYNREDWQTAIDNYQKILSQ---GQASEALYYNLANAHYKKGDIAPSIYYY 78

Query: 118 EEYITQYPESK----NVDYVY 134
           E+ +   P++     N+ Y  
Sbjct: 79  EKALQLAPDNPQVQANLKYAQ 99


>gi|58260608|ref|XP_567714.1| general transcriptional repressor [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|57229795|gb|AAW46197.1| general transcriptional repressor, putative [Cryptococcus
           neoformans var. neoformans JEC21]
          Length = 1101

 Score = 45.5 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 46/139 (33%), Gaps = 22/139 (15%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108
           TD    +  Y     ++  Q ++KAYE + Q        P              + Y   
Sbjct: 369 TDPSDAQSWYLLGRAYMAAQRYNKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIA 422

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +Y+ A       I   P    +  V+Y +G S  +   +   D       +   SR +E 
Sbjct: 423 QYRDALDAYSRAIRLNP---YISEVWYNLG-SLYESCNNQMAD------AMDAYSRALEL 472

Query: 169 YTNSPYVKGARFYVTVGRN 187
             N+      +  + + +N
Sbjct: 473 DPNN---TVIKQRMALLQN 488


>gi|73670517|ref|YP_306532.1| hypothetical protein Mbar_A3062 [Methanosarcina barkeri str.
           Fusaro]
 gi|72397679|gb|AAZ71952.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 391

 Score = 45.5 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 70/253 (27%), Gaps = 52/253 (20%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC----SRDFPFAGVARKSLLMS 100
           +      ++++    +YE+ V+  ++     A E F+       R FP       +L   
Sbjct: 122 EGEDPEKSNLKSTESLYEEGVILYRQGRLRLALEAFDMVLLENPRHFP-------ALFHR 174

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM---SYAQMIRDVPYDQRATKL 157
                   +Y++A    E      P            G+   S   +++         + 
Sbjct: 175 GNTLLKLKRYEEALETFESASRINPNHP---------GLWTNSGFALVK-----LEHLRQ 220

Query: 158 MLQYMSRIVERYTNSPYVKGARF----YVTVGRNQLAAKE-------------VEIGRYY 200
            L+   + +            +      V     +L   E              E G+ Y
Sbjct: 221 ALEAFEKSISLNPVQKNAWEGKEAVLVRVRKCEEKLKEFEKSLKRNPEDADIWFEKGKLY 280

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL---IQERY 257
           LK GE   +   F+  L          EA     +         EA     +    +  +
Sbjct: 281 LKLGELEKSREAFEKALEE---KSENAEAWHLRGKILFETGSEKEALHAFEMALRKKPNF 337

Query: 258 PQGYWARYVETLV 270
           P+  W      L+
Sbjct: 338 PEA-WYEKGRVLL 349


>gi|29653887|ref|NP_819579.1| TPR domain-containing protein [Coxiella burnetii RSA 493]
 gi|161831595|ref|YP_001596478.1| TPR repeat-containing methyltransferase [Coxiella burnetii RSA 331]
 gi|29541150|gb|AAO90093.1| tetratricopeptide repeat family protein [Coxiella burnetii RSA 493]
 gi|161763462|gb|ABX79104.1| tetratricopeptide repeat protein/methyltransferase [Coxiella
           burnetii RSA 331]
          Length = 561

 Score = 45.5 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 49/182 (26%), Gaps = 49/182 (26%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A +++   +FSKA  Y+ +     P       +            ++Q+A       +  
Sbjct: 179 AHVYMYLGDFSKAITYYEKRLALEPENA---DAQYDCGLAHLKDNQFQKAIDYFTNALLL 235

Query: 124 YPESKNVDY----VYYLVG------MSYAQMIRDVPYD------------QRATKLMLQY 161
            PE  +  Y     Y   G      + Y + +   P              Q   +  + Y
Sbjct: 236 NPEHPDCHYSLATAYLQRGDHKEALLHYLRQLEKKPQIECYYNVGVLHMYQERHREAIDY 295

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
             + +    N                      + I   YLK       I + +  + +Y 
Sbjct: 296 FKQALTLDPNYREA-----------------HLNIAAVYLK-------INQIKQAIEHYE 331

Query: 222 DA 223
             
Sbjct: 332 ST 333


>gi|254505611|ref|ZP_05117757.1| TPR repeat-containing protein [Vibrio parahaemolyticus 16]
 gi|219551264|gb|EED28243.1| TPR repeat-containing protein [Vibrio parahaemolyticus 16]
          Length = 603

 Score = 45.5 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 43/127 (33%), Gaps = 24/127 (18%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           L  F   +FF++A+  L       S         D        ++A+   + + + +A +
Sbjct: 306 LLMFRRGVFFAVALAVL-PLAHSPSAQASPWLTKD--------QQAMQHFENKQYQQAAD 356

Query: 79  YFNQCS----RDFPFAGV-----------ARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
            F   +      +                + +++   A      G YQ A  L E  + Q
Sbjct: 357 LFEDPNWKGIAQYESGDYQGAAETLAPLSSPQAMYNRANALAQLGNYQDAIDLYESVLKQ 416

Query: 124 YPESKNV 130
            P++++ 
Sbjct: 417 EPDNQDA 423



 Score = 35.9 bits (82), Expect = 5.7,   Method: Composition-based stats.
 Identities = 7/46 (15%), Positives = 19/46 (41%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94
           +++  +   + +Y +A    +  N+  A + +    +  P    AR
Sbjct: 379 ETLAPLSSPQAMYNRANALAQLGNYQDAIDLYESVLKQEPDNQDAR 424


>gi|254292267|ref|ZP_04963021.1| FOG: TPR repeat [Vibrio cholerae AM-19226]
 gi|150421817|gb|EDN13810.1| FOG: TPR repeat [Vibrio cholerae AM-19226]
          Length = 461

 Score = 45.5 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 14/133 (10%)

Query: 4   VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63
           +L  A+C+F         F+L + F +++     W    S  +  D      +  E Y +
Sbjct: 128 LLIAALCLFRRGVI----FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMRMFNNEQYAQ 180

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLG 117
           A    ++  +  A  Y+ +          ++ +          A     AG+ Q+A  L 
Sbjct: 181 AAEAFRDPRWQGAARYYAK-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLY 239

Query: 118 EEYITQYPESKNV 130
           E+ + Q P  ++ 
Sbjct: 240 EQVLKQEPNHQDA 252


>gi|94969718|ref|YP_591766.1| lytic transglycosylase, catalytic [Candidatus Koribacter versatilis
           Ellin345]
 gi|94551768|gb|ABF41692.1| Lytic transglycosylase, catalytic [Candidatus Koribacter versatilis
           Ellin345]
          Length = 798

 Score = 45.5 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/156 (12%), Positives = 55/156 (35%), Gaps = 11/156 (7%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQ---REVYEKAVLFLKEQNFSKAYEYFNQ 82
           +  ++AV  +     + ++            +   +++Y + ++     +  +   Y +Q
Sbjct: 322 VLANLAVSLMKSGATRDAQKYLDQIPATAAAEINGQKLYNEMMIARHNNDSDRVASYLSQ 381

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
             +    +   +++L  +  +      Y  +     E   ++PE     Y ++    S+ 
Sbjct: 382 LRQQASTSSFFQEALFEAGNMYMLQHDYDHSIDCYREIHERFPEGPRAAYAHWRA--SWF 439

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            +       Q  T   L+     +E+Y ++  V  A
Sbjct: 440 DLR------QGRTDAALREFREQLEKYPSTTEVTAA 469


>gi|221488858|gb|EEE27072.1| TPR domain-containing protein, putative [Toxoplasma gondii GT1]
          Length = 823

 Score = 45.5 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 60/195 (30%), Gaps = 51/195 (26%)

Query: 37  GWERQSSRDVYL---DSVTDVRYQREVYEKAVLFLKEQNFSKAY----EYFNQCSRDFPF 89
           G     S++  +    +   +       ++     +E+N+  A     +   Q    FP 
Sbjct: 111 GCSHDHSKERQIYEKPTGEKIDAAERFRQEGNAAFREKNYGLAAVNYRKALLQFDYTFPD 170

Query: 90  AGVARKSL--------LMSAFVQYSAGKYQQAASLGEEYIT------QYPESKNVDYVYY 135
               +K +        L  A  +     Y++       YI         P++      YY
Sbjct: 171 TDEEQKRMDSVKLPCHLNLAACKLQQQDYEEV------YIQCRLALEMDPKNTK---AYY 221

Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
             G+++ Q    V           + +   + +  +S  ++ A   + + R ++      
Sbjct: 222 RRGLAHLQQDNFV--------KAKEDLMEALTQEPSSKEIRDA---LQLLREKIHR---- 266

Query: 196 IGRYYLKRGE--YVA 208
               Y +R    Y A
Sbjct: 267 ----YHRRSAMTYKA 277


>gi|307152921|ref|YP_003888305.1| peptidase M48 Ste24p [Cyanothece sp. PCC 7822]
 gi|306983149|gb|ADN15030.1| peptidase M48 Ste24p [Cyanothece sp. PCC 7822]
          Length = 662

 Score = 45.5 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 38/84 (45%), Gaps = 4/84 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAFVQYSAGKYQQAASLG 117
           + +  +  L+EQ +S+A E   +       A      +  +      YS G+  +A +L 
Sbjct: 2   LLQDGLTALREQRYSQAVELLEEFCTQAANANDPTLSQGQMALIKAYYSNGQTDKAIALA 61

Query: 118 EEYITQYPESKNVDYVY-YLVGMS 140
           EE +T + +S+   +   +L G++
Sbjct: 62  EE-LTHHLDSQVSQWAQEFLKGLT 84


>gi|149375215|ref|ZP_01892987.1| hypothetical protein MDG893_06339 [Marinobacter algicola DG893]
 gi|149360579|gb|EDM49031.1| hypothetical protein MDG893_06339 [Marinobacter algicola DG893]
          Length = 934

 Score = 45.5 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 31/95 (32%)

Query: 33  CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
             L+                  +    VY +      E +   A  +F +    FP + +
Sbjct: 565 LALIAEGPPGDVPAKDTDSLQRQLASSVYYQGEKAASEGHIDTAVAHFQRVESAFPGSDI 624

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
           A K    +A     A ++Q A +    + T YP+ 
Sbjct: 625 AIKGRYDAANTLLKAERWQAAVNELTRFRTDYPQH 659



 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 34/219 (15%), Positives = 67/219 (30%), Gaps = 29/219 (13%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y+ A          ++ +   Q    +P + +  ++    A   +SA  Y +A S    
Sbjct: 130 LYQMAKAHAYTGQAEESIDRLRQLVGLYPSSSLVPEARFRIAEAAFSAQDYAEAESEYSR 189

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI------VERYTNSP 173
            I+            Y+ G S  +         RA K  L  +           R   S 
Sbjct: 190 VISGDGTDSLKTKARYMQGWSQYKQGASART--RAAKTFLAVLDGFGEDTRGFRRIPASD 247

Query: 174 -YVKGARFYVTVG-------RNQLAAKEVEIG--RY----YLKRGEYVAAIPRFQL---- 215
             +    F +             LA    + G   +    Y +  +Y A+  RF+     
Sbjct: 248 AELVDDTFRIVALMAAEDRGVESLAGWLTDAGGKDFGYLLYDRLADYYASNRRFEDSVAV 307

Query: 216 ---VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
               + ++         +A+ V+ +     +D AR   +
Sbjct: 308 NHAFVRDFQAHNAVPAFLAQNVDVWRMAGQIDRARAARA 346


>gi|114800143|ref|YP_758890.1| hypothetical protein HNE_0156 [Hyphomonas neptunium ATCC 15444]
 gi|114740317|gb|ABI78442.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444]
          Length = 318

 Score = 45.5 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 41/104 (39%), Gaps = 14/104 (13%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
             +     V+++ N P    A F++              G    ++  Y  +   +  ++
Sbjct: 211 AQEAFQSFVDQFGNDPQAGEAYFWL--------------GETLHQQNAYAESGQAYTTMI 256

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            ++ D E A +A+ARL  +   +    +A + +  + +RYP   
Sbjct: 257 RSFPDDERAPDALARLARSMRLIGDTAKACQALDTLPKRYPNAS 300



 Score = 44.7 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 37/112 (33%), Gaps = 8/112 (7%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++  A   L   +++ A E F      F     A ++        +    Y ++      
Sbjct: 195 LFAVARQRLLALDYAGAQEAFQSFVDQFGNDPQAGEAYFWLGETLHQQNAYAESGQAYTT 254

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            I  +P+ +        +  S  ++I D       T    Q +  + +RY N
Sbjct: 255 MIRSFPDDERAPDALARLARS-MRLIGD-------TAKACQALDTLPKRYPN 298



 Score = 39.3 bits (91), Expect = 0.57,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 28/91 (30%), Gaps = 16/91 (17%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           AR+ LL           Y  A    + ++ Q+         Y+ +G +  Q        Q
Sbjct: 199 ARQRLLAL--------DYAGAQEAFQSFVDQFGNDPQAGEAYFWLGETLHQ--------Q 242

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
            A     Q  + ++  + +      A   + 
Sbjct: 243 NAYAESGQAYTTMIRSFPDDERAPDALARLA 273


>gi|24212838|ref|NP_710319.1| TPR-repeat-containing protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|24193495|gb|AAN47337.1| TPR-repeat-containing protein [Leptospira interrogans serovar Lai
           str. 56601]
          Length = 1197

 Score = 45.5 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 54/146 (36%), Gaps = 10/146 (6%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVAR 94
            G ++ S  +    +  D   +   Y   ++   +  +++A   F +  +  P F+    
Sbjct: 757 SGNKKLSKEEFEAATQQDAANELAPYNIGIILFNDNLYNEAIGIFKEIIQKNPEFSD--- 813

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
            +    +++ Y  G  +QA     + +       N+ +   +  +S     R+   +   
Sbjct: 814 -AHYQISYIYYKRGDLEQAEKEIRKALDLERNEGNL-FAL-IRILS---EQRNKMANPAI 867

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARF 180
            K +L     + E++ +SP+   A  
Sbjct: 868 KKEVLDLGRELAEKFPSSPHAAQAER 893


>gi|79614|pir||PQ0180 CytB protein - Synechococcus sp. (strain PCC 7942)  (fragment)
 gi|256653|gb|AAB23486.1| 3' of cytA [Synechococcus]
          Length = 188

 Score = 45.5 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 43/126 (34%), Gaps = 17/126 (13%)

Query: 50  SVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           ++   +    +Y  +  + L  + + +A +  +      P         L      Y  G
Sbjct: 50  AIAHGKATAALYGNRCWVRLSLERYEEAIKDCSVALDLQPHEPET---WLNRGLAYYRQG 106

Query: 109 KYQQAASLGEEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           + Q A +  ++ + Q P     DY  YY  G++Y         D    +  +    + +E
Sbjct: 107 QSQAAIADFDQLLQQSPT----DYRAYYNRGLAY--------LDLAQPEQAIADFQQALE 154

Query: 168 RYTNSP 173
           R   + 
Sbjct: 155 RLPATE 160


>gi|226471570|emb|CAX70866.1| hypothetical protein [Schistosoma japonicum]
          Length = 431

 Score = 45.5 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 50/151 (33%), Gaps = 26/151 (17%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF----AGVARK--------SLL 98
              + Y   + EKA  FLK+  F  A E + +   +  +        +K          L
Sbjct: 253 PERIAYANTLKEKANNFLKDSKFDSAIELYKRLDDELQYVVANGPTEQKELSGVTVAVQL 312

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
             A V     K  +     +  +  + +++      + +G ++           +  +  
Sbjct: 313 NLALVYLKLCKPDKCIEFCKRVLDNFSDNEK---ALFRIGQAHLLR--------KDHEEA 361

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
           + Y  RIV +  N+     A   V +   ++
Sbjct: 362 VVYFKRIVTKNPNN---ASAVKQVQICEEEI 389


>gi|261343490|ref|ZP_05971135.1| putative periplasmic protein [Providencia rustigianii DSM 4541]
 gi|282568636|gb|EFB74171.1| putative periplasmic protein [Providencia rustigianii DSM 4541]
          Length = 262

 Score = 45.5 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 50/140 (35%), Gaps = 12/140 (8%)

Query: 50  SVTDVRYQREVYEKA-VLFLKEQ---NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
           + +    +++ Y  A  L +  +      +A        + +P +G    +      + Y
Sbjct: 131 APSSGGNEKDDYNAAVQLAMNSKSKAQIDEAIGALQGFIKTYPKSGYQSNANYWLGQLNY 190

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
           + G    AA      + QYP+S+      Y VG+        +  D+           ++
Sbjct: 191 NKGSKDDAAFYFATVVKQYPKSQKSSEALYKVGL--------IMQDKGQKDKAKAVYQQV 242

Query: 166 VERYTNSPYVKGARFYVTVG 185
           +++Y NS   K A   ++  
Sbjct: 243 LKQYPNSAGSKLAEKKLSAL 262



 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 39/112 (34%), Gaps = 14/112 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             +  +   ++ Y  S Y   A +++                    +G    A   F  V
Sbjct: 160 EAIGALQGFIKTYPKSGYQSNANYWLGQLN--------------YNKGSKDDAAFYFATV 205

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           +  Y  ++ + EA+ ++          D+A+ V   + ++YP    ++  E 
Sbjct: 206 VKQYPKSQKSSEALYKVGLIMQDKGQKDKAKAVYQQVLKQYPNSAGSKLAEK 257


>gi|158341619|ref|YP_001522783.1| TPR domain-containing protein [Acaryochloris marina MBIC11017]
 gi|158311860|gb|ABW33469.1| TPR domain protein [Acaryochloris marina MBIC11017]
          Length = 153

 Score = 45.5 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/105 (13%), Positives = 37/105 (35%), Gaps = 3/105 (2%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
              ++AVC        +      + +     + +++ +A+   ++ ++  A   F+Q   
Sbjct: 5   AVLTLAVCDAPSSVASTQSIEITEQIQSNISEYDLFNRALRKYEQGDYKGAIADFDQAIA 64

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
             P   +   + +   F      +Y +A +  +  I   PE    
Sbjct: 65  LNPQNVM---AYIHRGFTYDDMKEYSKAIADFDRAIALNPELPAA 106


>gi|34762911|ref|ZP_00143893.1| TETRATRICOPEPTIDE REPEAT FAMILY PROTEIN [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
 gi|27887438|gb|EAA24526.1| TETRATRICOPEPTIDE REPEAT FAMILY PROTEIN [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
          Length = 936

 Score = 45.5 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 68/188 (36%), Gaps = 14/188 (7%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
              +Q+  +  A  FL ++N   A + + +   +  +      S++    V Y+   Y +
Sbjct: 123 KKTFQKTFFAVAQNFLAKENNEAAQKAYKEIIDN-KYENYKE-SMMGLGIVYYNLKDYDK 180

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A     E+  + P+ +N + V YL   +  +           T   +     +     ++
Sbjct: 181 AIYWLSEFSKEMPK-ENKEMVSYLRASALYRK--------GNTDEAISRFEELANIEPST 231

Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN-YSDAEHAEEAMA 231
            Y + A  Y+    +    K+     +YL R +          ++ + Y   E+ ++A+ 
Sbjct: 232 EYSRKAALYLIEIYSN--RKDEAKVTFYLNRIKGTKEYNTAMTMIGDLYVTKENYDKALD 289

Query: 232 RLVEAYVA 239
              ++   
Sbjct: 290 YYNQSNDK 297



 Score = 40.1 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 68/206 (33%), Gaps = 33/206 (16%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y K +  +    + +A   F +       + ++ K  L      + A +Y +A   GE+Y
Sbjct: 508 YLKGIAAMGLGKYDEAESEFQKVLASGDQS-LSTKVYLNRVRNYFLAERYNEAVQAGEQY 566

Query: 121 ITQYPESKNVDYVYY-----LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
           +++   S + D V Y      +G+SY ++ +   YDQ                   S Y 
Sbjct: 567 LSK--LSPDKDKVIYSEMLDKIGLSYFRLGK---YDQAR-----------------SYYS 604

Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
           K A         +      +I   Y     Y  A   ++ V   + +  + E+A  + + 
Sbjct: 605 KIASMKGYEVYGK-----FQIADSYYNEKNYEKAGSLYKEVYNQFGETFYGEQAYYKYIM 659

Query: 236 AYVALALMDEAREVVSLIQERYPQGY 261
                   D          + YP   
Sbjct: 660 TLSLTGNTDAFEREKDNFMKVYPNSN 685


>gi|317013062|gb|ADU83670.1| paralysed flagella protein [Helicobacter pylori Lithuania75]
          Length = 801

 Score = 45.5 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 49/137 (35%), Gaps = 9/137 (6%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             +T   Y    Y +A   +  Q +  A    ++  +++P     +   L+        G
Sbjct: 186 PLLTTKGYDLNAYLEAKKQINSQAYFDALRTISRAFKNYPQTMFKKDLYLLEIIALGQLG 245

Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            K      +G ++I  YP   N+    Y V  +  +            K  ++Y  RI+ 
Sbjct: 246 IKKSLLIDIGTKWIKNYPTDPNIPEALYYVAKALDEN--------NNYKQAMRYYKRILL 297

Query: 168 RYTNSPYVKGARFYVTV 184
            Y NS Y   A+  + +
Sbjct: 298 EYKNSRYAPLAQMRLAI 314



 Score = 44.0 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 31/99 (31%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
             + RA   +    ++   + L I     +                +  TD      +Y 
Sbjct: 215 RTISRAFKNYPQTMFKKDLYLLEIIALGQLGIKKSLLIDIGTKWIKNYPTDPNIPEALYY 274

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
            A    +  N+ +A  Y+ +   ++  +  A  + +  A
Sbjct: 275 VAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRLA 313



 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 16/47 (34%)

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
           + NY    +  EA+  + +A        +A      I   Y    +A
Sbjct: 259 IKNYPTDPNIPEALYYVAKALDENNNYKQAMRYYKRILLEYKNSRYA 305


>gi|260440449|ref|ZP_05794265.1| hypothetical protein NgonDG_05071 [Neisseria gonorrhoeae DGI2]
 gi|291043748|ref|ZP_06569464.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|291012211|gb|EFE04200.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
          Length = 237

 Score = 45.5 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 43/125 (34%), Gaps = 11/125 (8%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S   V   + +Y +A+   +   FS A               +A++S+ +    +   G 
Sbjct: 111 SAHTVETAQNLYNQALKHYQNGRFSAAAALLKGADGGD-GGSIAQRSMYLLLQSRARMGN 169

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVER 168
            +    +G  Y  ++ +S     V + +G    +   +D+                +++ 
Sbjct: 170 CESVIEIGGRYANRFKDSPTAPEVIFKIGKCQYRLQQKDIAR---------ATWRSLIQT 220

Query: 169 YTNSP 173
           Y  SP
Sbjct: 221 YPGSP 225


>gi|218781266|ref|YP_002432584.1| hypothetical protein Dalk_3428 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218762650|gb|ACL05116.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 271

 Score = 45.5 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 34/261 (13%), Positives = 80/261 (30%), Gaps = 41/261 (15%)

Query: 8   AICIFEAWAYQLYKFALTIFFSIAVCFL-VGWERQSSRDVYLDSVTDVRYQREVYEKAVL 66
           A+ +       L K A     +  +C          ++D  +   +        +++A+ 
Sbjct: 17  ALLVMPDILVTLKKTAARCLLAAVICVWTASCASGPAKDGPIPGAS-------YFDRAIF 69

Query: 67  FLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
              +     A E + +    +      A  +L     + +  G+Y +A    ++ +   P
Sbjct: 70  SESKGRHLAAIEQYTRYLEMNQNSPEYAAPALNNRGTLYWVLGRYDEALQDFDKAVDMQP 129

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS--PY-----VKGA 178
           +S           ++Y     +V  D    +  ++  ++ +    N+   Y        +
Sbjct: 130 DS----------ALNYINR-GNVYADMGDVERAIEDYNQAITLDPNNGLAYSNRGLAWSS 178

Query: 179 RFYVTVGR----NQLA-AKE------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
                         +A   E      ++ G       +Y  A+  F  V+  +       
Sbjct: 179 LKRFDQAIPDLDKAIAFGHEGVYKSLMKRGVIRYGTKDYNGAVEDFSRVIKMHPGFT--- 235

Query: 228 EAMARLVEAYVALALMDEARE 248
           EA      AY  L   ++A+ 
Sbjct: 236 EAYYFRGLAYQQLNEAEKAQT 256



 Score = 40.5 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 36/107 (33%), Gaps = 6/107 (5%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            + + +   + F +A    ++            KSL+    ++Y    Y  A       I
Sbjct: 171 NRGLAWSSLKRFDQAIPDLDKAIAFGHEGVY--KSLMKRGVIRYGTKDYNGAVEDFSRVI 228

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
             +P        YY  G++Y Q + +    Q   +  +     + ++
Sbjct: 229 KMHPGFTE---AYYFRGLAY-QQLNEAEKAQTDLQTAMDLQKALEKQ 271


>gi|170717698|ref|YP_001784771.1| hypothetical protein HSM_1451 [Haemophilus somnus 2336]
 gi|168825827|gb|ACA31198.1| Tetratricopeptide TPR_2 repeat protein [Haemophilus somnus 2336]
          Length = 398

 Score = 45.5 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 70/200 (35%), Gaps = 30/200 (15%)

Query: 48  LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           LDS  +  +++++  K   A  FL    + +A   +     +      A  +L   A + 
Sbjct: 103 LDSSPNYTFEQKLLAKQQLAKDFLTIGFYDRAENLYILLIDE---PNYAENALQQLAVIY 159

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
               ++++A ++ E+     P   N+   +Y     Y +    +  D++     +  + +
Sbjct: 160 QKTKEWKKAINVAEKLAKISPTEDNIALAHY-----YCEYSLTLGSDEQQQAQAIHILKQ 214

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
            +     S                     + I   Y+   EY  A+   + VL    +A+
Sbjct: 215 ALNVSKTSVRAS-----------------ILIAERYIVNLEYQRAVQHLENVL--IQNAD 255

Query: 225 HAEEAMARLVEAYVALALMD 244
           +  E +  L   Y  L  +D
Sbjct: 256 YMSEILPALKYCYQELNRLD 275


>gi|83645407|ref|YP_433842.1| hypothetical protein HCH_02627 [Hahella chejuensis KCTC 2396]
 gi|83633450|gb|ABC29417.1| uncharacterized protein conserved in bacteria [Hahella chejuensis
           KCTC 2396]
          Length = 933

 Score = 45.5 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 66/229 (28%), Gaps = 41/229 (17%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D    R +Y+ A          KA     +    +P +G A ++      ++YSAG+
Sbjct: 122 QPGDKGNDRVLYQLARANGMLGQTDKALISLERLVGQYPRSGYATEAWFRIGELRYSAGE 181

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV--- 166
           Y +A S     +             Y++G +  +        Q      LQ   +++   
Sbjct: 182 YVKAQSAYSRVLADRSAGDLSSKARYMLGWTQFK--------QENFSASLQTFLQVLSHL 233

Query: 167 --------ERYTNSPYVKGARFYVTVG-------------------RNQLAAKEVEIG-- 197
                   E              +                         LA K +     
Sbjct: 234 ESNANPTGEEEPGVREAGDDALRIISIMASYGKGPETLKAAIALGDYRSLAPK-LYAALY 292

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
            YYL+R  Y  A    Q  +A Y  A    +   R++ AY    L   A
Sbjct: 293 NYYLQRERYQDASASAQAYIAAYPAATDRSDFHDRIIAAYEQGGLPSLA 341



 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 37/99 (37%), Gaps = 2/99 (2%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKA--VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
           S  +V + ++  +    E++  A     + +  ++ A E +    +  P      + L  
Sbjct: 75  SDPEVRIKALHRLINLEELFYDAKPQGLIDDDIWNIAIESYEALLQRQPGDKGNDRVLYQ 134

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            A      G+  +A    E  + QYP S      ++ +G
Sbjct: 135 LARANGMLGQTDKALISLERLVGQYPRSGYATEAWFRIG 173



 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 27/209 (12%), Positives = 60/209 (28%), Gaps = 36/209 (17%)

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
             A  YF+     FP  G   ++L +     +   +++ A    ++    YP+       
Sbjct: 402 QNAVAYFDGMEEIFPSEGKTAEALYLQGEAYFLLEEWELAVRAYDKAGYFYPDFPKRSEA 461

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
            Y    + ++ +     D       +  + R  + +        +           AA E
Sbjct: 462 AYASVNALSKAVDANLKDSALRSRRVDALLRFAKTFPRDSRATESLL--------FAANE 513

Query: 194 VEIGRYY------------------LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
           +     Y                  ++   +  A       L+ Y  +EHA         
Sbjct: 514 LYAMEQYGAALDAATQTASFTEDKAIRNAAWTIAGHSA-FALSRYQGSEHAYR------- 565

Query: 236 AYVALALMDEAREVVSLIQERYPQGYWAR 264
              AL+L         ++ E +    +++
Sbjct: 566 --QALSLRSRKASDYDVLMENFAASIYSQ 592



 Score = 37.8 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 26/74 (35%), Gaps = 8/74 (10%)

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A    E  + + P  K  D V Y +  +   +          T   L  + R+V +Y  S
Sbjct: 111 AIESYEALLQRQPGDKGNDRVLYQLARANGML--------GQTDKALISLERLVGQYPRS 162

Query: 173 PYVKGARFYVTVGR 186
            Y   A F +   R
Sbjct: 163 GYATEAWFRIGELR 176


>gi|323495159|ref|ZP_08100244.1| TPR repeat-containing protein [Vibrio brasiliensis LMG 20546]
 gi|323310599|gb|EGA63778.1| TPR repeat-containing protein [Vibrio brasiliensis LMG 20546]
          Length = 258

 Score = 45.5 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 23/128 (17%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               Y  A +  +++   YP+S      +Y +G  Y    +D        K  ++  + +
Sbjct: 153 KKRDYTGAIAAFQQFQKDYPDSSFTPNSHYWLGQLYFAKKQD--------KDAVKSFAAV 204

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           +  Y +S     A   +                   +      A   FQ V+  Y ++  
Sbjct: 205 IT-YKDSNKRADALVKLGEIAE--------------RNNNSAQAKKYFQQVVDEYPNSAS 249

Query: 226 AEEAMARL 233
           A+ A ARL
Sbjct: 250 AKLAQARL 257



 Score = 43.6 bits (102), Expect = 0.027,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 15/130 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            Q   D+   +R     +    +  + Y +S +   + +++              G+ Y 
Sbjct: 144 YQNAVDLILKKRDYTGAIAAFQQFQKDYPDSSFTPNSHYWL--------------GQLYF 189

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + +   A+  F  V+  Y D+    +A+ +L E         +A++    + + YP   
Sbjct: 190 AKKQDKDAVKSFAAVI-TYKDSNKRADALVKLGEIAERNNNSAQAKKYFQQVVDEYPNSA 248

Query: 262 WARYVETLVK 271
            A+  +  +K
Sbjct: 249 SAKLAQARLK 258



 Score = 40.9 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 51/128 (39%), Gaps = 10/128 (7%)

Query: 57  QREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           ++  Y+ AV   LK+++++ A   F Q  +D+P +     S      + ++  + + A  
Sbjct: 140 EQTAYQNAVDLILKKRDYTGAIAAFQQFQKDYPDSSFTPNSHYWLGQLYFAKKQDKDAVK 199

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
                IT    +K  D        +  ++      +  +     +Y  ++V+ Y NS   
Sbjct: 200 SFAAVITYKDSNKRAD--------ALVKLGEIAERNNNSA-QAKKYFQQVVDEYPNSASA 250

Query: 176 KGARFYVT 183
           K A+  + 
Sbjct: 251 KLAQARLK 258


>gi|256846394|ref|ZP_05551851.1| tetratricopeptide repeat family protein [Fusobacterium sp.
           3_1_36A2]
 gi|256718163|gb|EEU31719.1| tetratricopeptide repeat family protein [Fusobacterium sp.
           3_1_36A2]
          Length = 936

 Score = 45.5 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 68/188 (36%), Gaps = 14/188 (7%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
              +Q+  +  A  FL ++N   A + + +   +  +      S++    V Y+   Y +
Sbjct: 123 KKTFQKTFFAVAQNFLAKENNEAAQKAYKEIIDN-KYENYKE-SMMGLGIVYYNLKDYDK 180

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A     E+  + P+ +N + V YL   +  +           T   +     +     ++
Sbjct: 181 AIYWLSEFSKEMPK-ENKEMVSYLRASALYRK--------GNTDEAISRFEELANIEPST 231

Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN-YSDAEHAEEAMA 231
            Y + A  Y+    +    K+     +YL R +          ++ + Y   E+ ++A+ 
Sbjct: 232 EYSRKAALYLIEIYSN--RKDEAKVTFYLNRIKGTKEYNTAMTMIGDLYVTKENYDKALD 289

Query: 232 RLVEAYVA 239
              ++   
Sbjct: 290 YYNQSNDK 297



 Score = 42.0 bits (98), Expect = 0.093,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 67/206 (32%), Gaps = 33/206 (16%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y K +  +    + +A   F +       + ++ K  L      + A +Y +A   GE+Y
Sbjct: 508 YLKGIAAMGLGKYDEAESEFQKVLASGDQS-LSTKVYLNRVRNYFLAERYNEAVQAGEQY 566

Query: 121 ITQYPESKNVDYVYY-----LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
           +++   S + D V Y      +G+SY ++ +   YDQ                     Y 
Sbjct: 567 LSK--LSPDKDKVIYSEMLDKIGLSYFRLGK---YDQARAY-----------------YS 604

Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
           K A         +      +I   Y     Y  A   ++ V   + +  + E+A  + + 
Sbjct: 605 KIASMKGYEVYGK-----FQIADSYYNEKNYEKAASLYKEVYNQFGETFYGEQAYYKYIM 659

Query: 236 AYVALALMDEAREVVSLIQERYPQGY 261
                   D          + YP   
Sbjct: 660 TLSLTGNTDAFEREKDNFMKVYPNSN 685


>gi|229514669|ref|ZP_04404130.1| TPR domain protein in aerotolerance operon [Vibrio cholerae TMA 21]
 gi|229348649|gb|EEO13607.1| TPR domain protein in aerotolerance operon [Vibrio cholerae TMA 21]
          Length = 656

 Score = 45.5 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 14/133 (10%)

Query: 4   VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63
           +L  A+C+F         F+L + F +++     W    S  +  D      +  E Y +
Sbjct: 309 LLIAALCLFRRGVI----FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMRMFNNEQYAQ 361

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLG 117
           A    ++  +  A  Y+ +          ++ +          A     AG+ Q+A  L 
Sbjct: 362 AAEAFRDPRWQGAARYYAK-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLY 420

Query: 118 EEYITQYPESKNV 130
           E+ + Q P  ++ 
Sbjct: 421 EQVLKQEPNHQDA 433


>gi|237741251|ref|ZP_04571732.1| tetratricopeptide repeat family protein [Fusobacterium sp. 4_1_13]
 gi|229430783|gb|EEO40995.1| tetratricopeptide repeat family protein [Fusobacterium sp. 4_1_13]
          Length = 936

 Score = 45.5 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 68/188 (36%), Gaps = 14/188 (7%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
              +Q+  +  A  FL ++N   A + + +   +  +      S++    V Y+   Y +
Sbjct: 123 KKTFQKTFFAVAQNFLAKENNEAAQKAYKEIIDN-KYENYKE-SMMGLGIVYYNLKDYDK 180

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A     E+  + P+ +N + V YL   +  +           T   +     +     ++
Sbjct: 181 AIYWLSEFSKEMPK-ENKEMVSYLRASALYRK--------GNTDEAISRFEELANIEPST 231

Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN-YSDAEHAEEAMA 231
            Y + A  Y+    +    K+     +YL R +          ++ + Y   E+ ++A+ 
Sbjct: 232 EYSRKAALYLIEIYSN--RKDEAKVTFYLNRIKGTKEYNTAMTMIGDLYVTKENYDKALD 289

Query: 232 RLVEAYVA 239
              ++   
Sbjct: 290 YYNQSNDK 297



 Score = 38.9 bits (90), Expect = 0.67,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 64/206 (31%), Gaps = 33/206 (16%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y K +  +    + +A   F +       + ++ K  L      + A +Y +A   GE+Y
Sbjct: 508 YLKGIAAMGLGKYDEAESEFQKVLASGDQS-LSTKVYLNRVRNYFLAERYNEAVQAGEQY 566

Query: 121 ITQYPESKNVDYVYY-----LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
           +++   S + D V Y      +G+SY ++                Y            Y 
Sbjct: 567 LSK--LSPDKDKVIYSEMLDKIGLSYFRL--------GKYNQARAY------------YS 604

Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
           K A         +      +I   Y     Y  A   ++ V   + +  + E+A  + + 
Sbjct: 605 KIASIKGYEVYGK-----FQIADSYYNEKNYEKAASLYKEVYNQFGETFYGEQAYYKYIM 659

Query: 236 AYVALALMDEAREVVSLIQERYPQGY 261
                   D          + YP   
Sbjct: 660 TLSLTGNTDAFEREKDNFMKVYPNSN 685


>gi|218438707|ref|YP_002377036.1| hypothetical protein PCC7424_1733 [Cyanothece sp. PCC 7424]
 gi|218171435|gb|ACK70168.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7424]
          Length = 538

 Score = 45.5 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 27/211 (12%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           ++    +  + + +A E F +     P +      +    +   +   +Y QA    E+ 
Sbjct: 344 QRGNALIGLKRYEEALESFEKALSLEPNYGE----AWRNRSVALWHLEEYPQALMSVEQA 399

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           IT  P        ++   +   Q        Q+     +    + +     +   +    
Sbjct: 400 ITINPMDSQ---AWFNKAIILTQ--------QKQYNEAITAYDQALAG---NINYQSPSA 445

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
            V +  NQ A         + +  +Y AA+   Q  L    D+    +A+     A ++L
Sbjct: 446 KVPILVNQSA--------VFWQLKQYQAALLSAQSALDLNPDSLAKTKALYNKSLALISL 497

Query: 241 ALMDEAREVVSLIQERYPQGYWARYVETLVK 271
               +A E +  + E  P+   A+     ++
Sbjct: 498 ENYQQAEETLKYLLEIAPENQSAQDAMKFIQ 528



 Score = 35.9 bits (82), Expect = 6.7,   Method: Composition-based stats.
 Identities = 15/132 (11%), Positives = 49/132 (37%), Gaps = 11/132 (8%)

Query: 61  YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKS--LLMSAFVQYSAGKYQQAASLG 117
           + KA++  +++ +++A   +    + +  +   + K   L+  + V +   +YQ A    
Sbjct: 411 FNKAIILTQQKQYNEAITAYDQALAGNINYQSPSAKVPILVNQSAVFWQLKQYQAALLSA 470

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           +  +   P+S       Y   ++   +           +   + +  ++E    +   + 
Sbjct: 471 QSALDLNPDSLAKTKALYNKSLALISL--------ENYQQAEETLKYLLEIAPENQSAQD 522

Query: 178 ARFYVTVGRNQL 189
           A  ++    N +
Sbjct: 523 AMKFIQQKINSM 534


>gi|313668554|ref|YP_004048838.1| periplasmic protein [Neisseria lactamica ST-640]
 gi|313006016|emb|CBN87475.1| putative periplasmic protein [Neisseria lactamica 020-06]
          Length = 238

 Score = 45.5 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 43/125 (34%), Gaps = 11/125 (8%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           SV  V   + +Y +A+   +   FS A               +A++S+ +    +   G 
Sbjct: 112 SVHTVETAQNLYNQALKHYQNGRFSAAAALLKGADGGD-GGSIAQRSMYLLLQSRARMGN 170

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVER 168
            +    +G  Y  ++ +S       + +G    +   +D+                +++ 
Sbjct: 171 CESVIEIGGRYANRFKDSPTAPEAIFKIGECQYRLQQKDIAR---------ATWRSLIQA 221

Query: 169 YTNSP 173
           Y  SP
Sbjct: 222 YPGSP 226



 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 20/52 (38%), Gaps = 7/52 (13%)

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             RF+       D+  A EA+ ++ E    L   D AR     + + YP   
Sbjct: 182 ANRFK-------DSPTAPEAIFKIGECQYRLQQKDIARATWRSLIQAYPGSP 226


>gi|330508422|ref|YP_004384850.1| TPR-repeat-containing protein [Methanosaeta concilii GP-6]
 gi|328929230|gb|AEB69032.1| TPR-repeat protein [Methanosaeta concilii GP-6]
          Length = 208

 Score = 45.5 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 34/82 (41%), Gaps = 7/82 (8%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y K +   ++  + +A   F++  +D+P    A ++           GKY++A    +  
Sbjct: 25  YNKGIDLAEQGRYDEAIAEFDRYIQDYP--DYA-RAWYNKGVALTQQGKYEEALIAFDRV 81

Query: 121 ITQYPESKNVDY----VYYLVG 138
               P++    Y    V Y++G
Sbjct: 82  TDIEPQNSQAWYNRGVVLYILG 103



 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 26/69 (37%), Gaps = 15/69 (21%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
             G+Y +A +  + YI  YP     DY   +Y  G++  Q        Q   +  L    
Sbjct: 33  EQGRYDEAIAEFDRYIQDYP-----DYARAWYNKGVALTQ--------QGKYEEALIAFD 79

Query: 164 RIVERYTNS 172
           R+ +    +
Sbjct: 80  RVTDIEPQN 88


>gi|254415849|ref|ZP_05029606.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
 gi|196177276|gb|EDX72283.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
          Length = 383

 Score = 45.5 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 21/118 (17%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY-------SAGK 109
               Y +   +++ +N+  A E  NQ  R  P           +A   +         G 
Sbjct: 269 PEAYYRRGNAYVELENYQAAIEDLNQVLRLNP----------DNAVAYFSRGYSRDELGD 318

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           YQ A +   + I   P  +  D  YY   +   +   ++ Y Q   +   Q   +I+ 
Sbjct: 319 YQGAIADYNQAIKLNP--EYAD-AYYDQALEDFRKAAEI-YQQEGNREWYQKAQQIIR 372



 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/129 (11%), Positives = 37/129 (28%), Gaps = 18/129 (13%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             V      + +   A +  ++ N+ +A     Q  R  P      ++            
Sbjct: 227 PVVAQEPTAQNLISLAGIKTEKGNYQEAIADLTQALRLSPNNP---EAYYRRGNAYVELE 283

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ-RATKLMLQYMSRIVE 167
            YQ A     + +   P++           ++Y    R    D+    +  +   ++ ++
Sbjct: 284 NYQAAIEDLNQVLRLNPDN----------AVAYF--SRGYSRDELGDYQGAIADYNQAIK 331

Query: 168 RYTNSPYVK 176
                 Y  
Sbjct: 332 LNP--EYAD 338


>gi|59801164|ref|YP_207876.1| hypothetical protein NGO0747 [Neisseria gonorrhoeae FA 1090]
 gi|240014091|ref|ZP_04721004.1| hypothetical protein NgonD_05483 [Neisseria gonorrhoeae DGI18]
 gi|240016525|ref|ZP_04723065.1| hypothetical protein NgonFA_05034 [Neisseria gonorrhoeae FA6140]
 gi|240115740|ref|ZP_04729802.1| hypothetical protein NgonPID1_05754 [Neisseria gonorrhoeae PID18]
 gi|240118036|ref|ZP_04732098.1| hypothetical protein NgonPID_06181 [Neisseria gonorrhoeae PID1]
 gi|240121652|ref|ZP_04734614.1| hypothetical protein NgonPI_07778 [Neisseria gonorrhoeae PID24-1]
 gi|240125772|ref|ZP_04738658.1| hypothetical protein NgonSK_06077 [Neisseria gonorrhoeae SK-92-679]
 gi|268601418|ref|ZP_06135585.1| periplasmic protein [Neisseria gonorrhoeae PID18]
 gi|268603749|ref|ZP_06137916.1| periplasmic protein [Neisseria gonorrhoeae PID1]
 gi|268684369|ref|ZP_06151231.1| periplasmic protein [Neisseria gonorrhoeae SK-92-679]
 gi|293399031|ref|ZP_06643196.1| hypothetical protein NGNG_00222 [Neisseria gonorrhoeae F62]
 gi|59718059|gb|AAW89464.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
 gi|268585549|gb|EEZ50225.1| periplasmic protein [Neisseria gonorrhoeae PID18]
 gi|268587880|gb|EEZ52556.1| periplasmic protein [Neisseria gonorrhoeae PID1]
 gi|268624653|gb|EEZ57053.1| periplasmic protein [Neisseria gonorrhoeae SK-92-679]
 gi|291610445|gb|EFF39555.1| hypothetical protein NGNG_00222 [Neisseria gonorrhoeae F62]
          Length = 237

 Score = 45.5 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 43/125 (34%), Gaps = 11/125 (8%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S   V   + +Y +A+   +   FS A               +A++S+ +    +   G 
Sbjct: 111 SAHTVETAQNLYNQALKHYQNGRFSAAAALLKGADGGD-GGSIAQRSMYLLLQSRARMGN 169

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVER 168
            +    +G  Y  ++ +S     V + +G    +   +D+                +++ 
Sbjct: 170 CESVIEIGGRYANRFKDSPTAPEVIFKIGECQYRLQQKDIAR---------ATWRSLIQT 220

Query: 169 YTNSP 173
           Y  SP
Sbjct: 221 YPGSP 225


>gi|294784538|ref|ZP_06749827.1| tetratricopeptide repeat family protein [Fusobacterium sp. 3_1_27]
 gi|294487754|gb|EFG35113.1| tetratricopeptide repeat family protein [Fusobacterium sp. 3_1_27]
          Length = 936

 Score = 45.5 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 68/188 (36%), Gaps = 14/188 (7%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
              +Q+  +  A  FL ++N   A + + +   +  +      S++    V Y+   Y +
Sbjct: 123 KKTFQKTFFAVAQNFLAKENNEAAQKAYKEIIDN-KYENYKE-SMMGLGIVYYNLKDYDK 180

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A     E+  + P+ +N + V YL   +  +           T   +     +     ++
Sbjct: 181 AIYWLSEFSKEMPK-ENKEMVSYLRASALYRK--------GNTDEAISRFEELANIEPST 231

Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN-YSDAEHAEEAMA 231
            Y + A  Y+    +    K+     +YL R +          ++ + Y   E+ ++A+ 
Sbjct: 232 EYSRKAALYLIEIYSN--RKDEAKVTFYLNRIKGTKEYNTAMTMIGDLYVTKENYDKALD 289

Query: 232 RLVEAYVA 239
              ++   
Sbjct: 290 YYNQSNDK 297



 Score = 42.0 bits (98), Expect = 0.096,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 67/206 (32%), Gaps = 33/206 (16%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y K +  +    + +A   F +       + ++ K  L      + A +Y +A   GE+Y
Sbjct: 508 YLKGIAAMGLGKYDEAESEFQKVLASGDQS-LSTKVYLNRVRNYFLAERYNEAVQAGEQY 566

Query: 121 ITQYPESKNVDYVYY-----LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
           +++   S + D V Y      +G+SY ++ +   YDQ                     Y 
Sbjct: 567 LSK--LSPDKDKVIYSEMLDKIGLSYFRLGK---YDQARAY-----------------YS 604

Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
           K A         +      +I   Y     Y  A   ++ V   + +  + E+A  + + 
Sbjct: 605 KIASMKGYEVYGK-----FQIADSYYNEKNYEKAASLYKEVYNQFGETFYGEQAYYKYIM 659

Query: 236 AYVALALMDEAREVVSLIQERYPQGY 261
                   D          + YP   
Sbjct: 660 TLSLTGNTDAFEREKDNFMKVYPNSN 685


>gi|289192108|ref|YP_003458049.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22]
 gi|288938558|gb|ADC69313.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22]
          Length = 566

 Score = 45.5 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 68/214 (31%), Gaps = 43/214 (20%)

Query: 62  EKAVLFLKEQNFSKAYE-YFNQCSRDFPFA-GVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            +A  +L E  + KA E Y     +                A+  Y   KY  A     E
Sbjct: 19  TEANYYLDEGIYDKAVECYLKALEKKNNNPIDW-----FNLAYALYHLQKYDSALEAINE 73

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +   P +    Y  YL G+ + +                     I+  Y    Y+K A 
Sbjct: 74  ALKISPSNV---YFAYLKGLIHYKR------------------GEILVAY---KYLKNAS 109

Query: 180 FYV--TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
             +        L       G   +K G Y  A+   +  L +Y        A+ +  + Y
Sbjct: 110 EKIKNDELFEIL-------GDISVKYGRYEEAL---KYYLKSYKINSKNLNALFKAGKVY 159

Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           +    +D+A +  + I +  P     + VE + K
Sbjct: 160 LLFGDIDKAYDTFNKILKENPNHECKKIVECMEK 193



 Score = 40.5 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 67/210 (31%), Gaps = 47/210 (22%)

Query: 73  FSKAYEYFNQCSRDFPFA-GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           + KA EY ++    F  +   A+K       + Y  G    A     + I   P++    
Sbjct: 250 YKKALEYIDKSISIFNRSLYYAKK-----GDILYKLGDEDGAIEAYNKAIKLNPQNP--- 301

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN-------------------- 171
           Y Y+ + + Y +            +    +  +++E Y                      
Sbjct: 302 YAYFGLAILYYRK--------GELEKSSNFFDKVLETYLEELSEEDISILNLYSLIGKAE 353

Query: 172 ----SPYVKGARFYVTVGRNQL-AAKEVEIGRY-YLKRGEYVAAIPRFQLVLANYSDAEH 225
               S Y   A  YV    N   +++   +  Y Y K G Y  A   F   L        
Sbjct: 354 TTGISRYYYEAMKYVDNLINMENSSRWWYVKGYIYYKLGNYKDAYESFINALRVNPKDID 413

Query: 226 AEEAMARLVEAYVALALMDEA-REVVSLIQ 254
             +++A ++E       +DEA      +++
Sbjct: 414 TLKSLAIVLE---KSGKIDEAITTYTKILK 440


>gi|213410593|ref|XP_002176066.1| mitochondrial TOM complex subunit Tom70 [Schizosaccharomyces
           japonicus yFS275]
 gi|212004113|gb|EEB09773.1| mitochondrial TOM complex subunit Tom70 [Schizosaccharomyces
           japonicus yFS275]
          Length = 638

 Score = 45.5 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 45/127 (35%), Gaps = 20/127 (15%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF---NQCSRDFPFAGVARKSLLMS 100
           +                Y +A +     +F+KA + +   N+    F +        +  
Sbjct: 414 KTFEKAESVSTTDPDLYYHRAQVHFISGDFAKAIKDYRKSNELDDTFIYGY------IQL 467

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           A  QY + + ++A    E    ++P+S  V Y YY           ++  DQ+     L 
Sbjct: 468 AVAQYKSNEVEEAVKTFEMCKERFPDSGEV-YNYY----------GEILLDQQKFDEALD 516

Query: 161 YMSRIVE 167
           +  R +E
Sbjct: 517 HFDRAIE 523


>gi|86134843|ref|ZP_01053425.1| aerotolerance-related exported protein [Polaribacter sp. MED152]
 gi|85821706|gb|EAQ42853.1| aerotolerance-related exported protein [Polaribacter sp. MED152]
          Length = 252

 Score = 45.5 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 34/78 (43%), Gaps = 7/78 (8%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQ 112
           + +++++E A    K+QN+ KA E++    +    +     S L        Y   +   
Sbjct: 18  QDEQKIFESANEMYKQQNYEKAIEFYKTLEKRNLVS-----SELFYNIGNAHYKLNEVGP 72

Query: 113 AASLGEEYITQYPESKNV 130
           A    E+ +   P++++V
Sbjct: 73  AIFYYEKALQLDPDNEDV 90


>gi|289662176|ref|ZP_06483757.1| hypothetical protein XcampvN_03498 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
 gi|289667992|ref|ZP_06489067.1| hypothetical protein XcampmN_05688 [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 604

 Score = 45.5 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 38/111 (34%), Gaps = 9/111 (8%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           ++    +     VC L   +   + +  L    D   Q+ + +  V   ++ +F+ A + 
Sbjct: 324 FRRRAVVAVLAMVCVLPLAQPAHAANGSLWQRADQVQQQRL-DAGVQAYRKGDFATAQKA 382

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           F              + L          G+Y  A +  +  + Q+P  ++ 
Sbjct: 383 FEAVP--------TDEGLYNLGNALARQGQYDAAIAAYDRALKQHPNQQDA 425


>gi|194221768|ref|XP_001489102.2| PREDICTED: similar to intraflagellar transport 88 homolog [Equus
           caballus]
          Length = 825

 Score = 45.5 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 76/259 (29%), Gaps = 55/259 (21%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLM 99
           Q+S    L   +D      +  K        ++ KA E++      D   +     +L  
Sbjct: 469 QASSYADLAVNSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYN 524

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY-------------AQMIR 146
                    +  +A      ++  +   +N   V Y +   Y              Q+I 
Sbjct: 525 IGLTYKKLNRLDEALDC---FLKLHAILRNSAQVLYQIAHVYELMEDPNQAIEWLMQLIS 581

Query: 147 DVPYDQRATKL-------------MLQYMSRIVERYT--------------NSPYVKGAR 179
            VP D RA                  QY       +               ++ + + A 
Sbjct: 582 VVPTDSRALSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAI 641

Query: 180 FYVT---VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
            Y     + +      ++ +   + + G Y  A+  ++ +   + +     E +  LV  
Sbjct: 642 QYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRKFPE---NVECLRFLVRL 698

Query: 237 YVALALMDEAREVVSLIQE 255
              + L  E +E  + ++ 
Sbjct: 699 CTDIGLK-EVQEYATKLKR 716



 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 74/233 (31%), Gaps = 67/233 (28%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117
            KA+ +L++++F++A E      +    + V   +    +F+ Y   ++ QA+S      
Sbjct: 421 NKAITYLRQKDFNQAVETLKMFEKKD--SRVKSAAATNLSFLYYLENEFAQASSYADLAV 478

Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147
             + Y    P    +K      N DY                     Y +G++Y ++ R 
Sbjct: 479 NSDRY---NPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNR- 534

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
                      L    ++     NS                 A    +I   Y    +  
Sbjct: 535 -------LDEALDCFLKLHAILRNS-----------------AQVLYQIAHVYELMEDPN 570

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            AI   + ++   S       A+++L E Y +     +A +        +P  
Sbjct: 571 QAI---EWLMQLISVVPTDSRALSKLGELYDSEGDKSQAFQYYYESYRYFPSN 620


>gi|118602527|ref|YP_903742.1| TPR repeat-containing protein [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|118567466|gb|ABL02271.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Ruthia magnifica
           str. Cm (Calyptogena magnifica)]
          Length = 222

 Score = 45.5 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/127 (12%), Positives = 42/127 (33%), Gaps = 10/127 (7%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           +  + +Y +A   L    + +A + F Q    +P            A    +   +  A 
Sbjct: 91  QKAKRIYTQARSLLVTDQYDQAIKLFKQYLATYPNNNYTSDVQYWLAKSYLAKDNFYNAR 150

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIR-DVPYDQRATKLMLQYMSRIVERYTNSP 173
           +    +  Q P         Y    S  ++ R  +  +Q+        ++ ++ ++ +  
Sbjct: 151 NAFVAFQKQNPLH-------YKFSNSLFELARVYIELNQQD--KARSLLNTMLVKFPSHK 201

Query: 174 YVKGARF 180
            +  A+ 
Sbjct: 202 IINRAKQ 208



 Score = 40.9 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 40/114 (35%), Gaps = 14/114 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             ++   + +  Y N+ Y    +++       LA   +    +Y  R  +VA        
Sbjct: 111 QAIKLFKQYLATYPNNNYTSDVQYW-------LAKSYLAKDNFYNARNAFVA-------F 156

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
                       ++  L   Y+ L   D+AR +++ +  ++P        + L+
Sbjct: 157 QKQNPLHYKFSNSLFELARVYIELNQQDKARSLLNTMLVKFPSHKIINRAKQLL 210


>gi|108760033|ref|YP_631571.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622]
 gi|108463913|gb|ABF89098.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622]
          Length = 1219

 Score = 45.5 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 50/154 (32%), Gaps = 30/154 (19%)

Query: 144 MIRDVPYDQRATKL---MLQYMSRIVERYTN-SPYVKGARFYVTVGRNQLAAK--EVEIG 197
            I D   D  A K     +    R++ +  + +P      + ++    + +    ++E+ 
Sbjct: 116 RIPDAKRDALADKKRDEAIAAFKRLIPKLRDGNPQKAEMLYRLSELYWEKSKYLYQLEMT 175

Query: 198 RYYLKRGEYVAAIPR------------------------FQLVLANYSDAEHAEEAMARL 233
           R+     EY AA+ R                        ++ +L  Y D    +E +  +
Sbjct: 176 RFLAAEKEYDAAVARGEKVEPPKKNHADSERYRTETMGIYEDILRAYPDYPQRDEVLFSM 235

Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
              Y  L   ++A      +   +P+  +     
Sbjct: 236 GYNYYELGRREDAVARYEELIRDFPKSQFVPDAY 269



 Score = 38.6 bits (89), Expect = 0.88,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 32/60 (53%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           KE+N  KA E F +   DFP +  A ++L  +  +   AG+  +  + GE ++ +YP S 
Sbjct: 749 KEKNPKKAAEEFLRFVSDFPKSENADRALTYAMVIAQEAGEIDKGLAAGERFLKEYPRSP 808



 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 49/121 (40%), Gaps = 12/121 (9%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKE-----QNFSKAYEY-------FNQCSRDFP 88
           + S+ +Y   +T      + Y+ AV   ++     +N + +  Y       +    R +P
Sbjct: 164 EKSKYLYQLEMTRFLAAEKEYDAAVARGEKVEPPKKNHADSERYRTETMGIYEDILRAYP 223

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
                 + L    +  Y  G+ + A +  EE I  +P+S+ V   Y  +G  Y +  + +
Sbjct: 224 DYPQRDEVLFSMGYNYYELGRREDAVARYEELIRDFPKSQFVPDAYIQLGNHYFENNKLI 283

Query: 149 P 149
           P
Sbjct: 284 P 284



 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 37/90 (41%), Gaps = 8/90 (8%)

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
           V       ++AA     +++ +P+S+N D       ++YA +I     +       L   
Sbjct: 746 VYKKEKNPKKAAEEFLRFVSDFPKSENAD-----RALTYAMVIAQ---EAGEIDKGLAAG 797

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
            R ++ Y  SP+   AR+ +     ++A  
Sbjct: 798 ERFLKEYPRSPFELKARYSLAGLYEKVAEY 827



 Score = 35.5 bits (81), Expect = 9.3,   Method: Composition-based stats.
 Identities = 9/76 (11%), Positives = 22/76 (28%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
            D+        +    ++     + +      A   + +  RDFP +     + +     
Sbjct: 216 EDILRAYPDYPQRDEVLFSMGYNYYELGRREDAVARYEELIRDFPKSQFVPDAYIQLGNH 275

Query: 104 QYSAGKYQQAASLGEE 119
            +   K   A    E+
Sbjct: 276 YFENNKLIPAKENYEK 291


>gi|113474798|ref|YP_720859.1| hypothetical protein Tery_1009 [Trichodesmium erythraeum IMS101]
 gi|110165846|gb|ABG50386.1| TPR repeat [Trichodesmium erythraeum IMS101]
          Length = 273

 Score = 45.5 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/261 (11%), Positives = 70/261 (26%), Gaps = 68/261 (26%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
            + + K  +TI      CF       ++      +   +     ++++A+       F+ 
Sbjct: 2   LHLIQKLFITILLFFLFCFSNPSNVIAATQSQNITPAQLEELHNLFDQALNASNNGEFAN 61

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A + + Q                                      I  YP++  +     
Sbjct: 62  AEKLWTQI-------------------------------------IELYPDNPAI----- 79

Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
                      ++   Q   +  +    + +E          A     +   ++      
Sbjct: 80  ------WSNRGNIRLSQNKIEEAISDYEKAIEILP---LAPDAYLNRGIAYERIKKWSEA 130

Query: 196 IGRY-------------YLKRGEYVAAIPRFQLVLANYSD-AEHAEE---AMARLVEAYV 238
           I  Y             Y  RG     + +++    +Y   +E A E   A+A    A  
Sbjct: 131 IADYNQVIELDPTDPVAYNNRGNAEGGLGKWEKATEDYKKASELAPEYAFALANYSLALY 190

Query: 239 ALALMDEAREVVSLIQERYPQ 259
            +    +A + +  +  +YP 
Sbjct: 191 QIGQTQKAVQTMKSLVRKYPN 211


>gi|327193464|gb|EGE60360.1| hypothetical protein RHECNPAF_157007 [Rhizobium etli CNPAF512]
          Length = 329

 Score = 45.5 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/142 (14%), Positives = 47/142 (33%), Gaps = 14/142 (9%)

Query: 33  CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
             +       +          +  + + Y+ A   +   ++  A + FNQ    +P +  
Sbjct: 181 ATIGSGPIPDANGKTPQQTASLGSEADQYKAAYGHVLSGDYGTAEQEFNQYIAHYPSSAR 240

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP---ESKNVDYVYYLVGMSYAQMIRDVP 149
           A  +        YS GKY +A    + ++  +     S+    +   +GMS A +     
Sbjct: 241 AADANFWLGEALYSQGKYNEA---AKTFLNAHQKYGSSEKAPEMLLKLGMSLAALDNK-- 295

Query: 150 YDQRATKLMLQYMSRIVERYTN 171
                 +     +  + +RY  
Sbjct: 296 ------ETACATLREVSKRYPK 311



 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 37/104 (35%), Gaps = 14/104 (13%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
             Q  ++ +  Y +S     A F++                    +G+Y  A   F    
Sbjct: 224 AEQEFNQYIAHYPSSARAADANFWLGEAL--------------YSQGKYNEAAKTFLNAH 269

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             Y  +E A E + +L  +  AL   + A   +  + +RYP+  
Sbjct: 270 QKYGSSEKAPEMLLKLGMSLAALDNKETACATLREVSKRYPKAS 313


>gi|325279499|ref|YP_004252041.1| hypothetical protein Odosp_0784 [Odoribacter splanchnicus DSM
           20712]
 gi|324311308|gb|ADY31861.1| hypothetical protein Odosp_0784 [Odoribacter splanchnicus DSM
           20712]
          Length = 1153

 Score = 45.5 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 48/151 (31%), Gaps = 12/151 (7%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y     ++A    + YI ++  + N+  VYYL                       +Y + 
Sbjct: 563 YRLNDPEKALECFDAYIQRFKNTANLPMVYYL--------ASTTALKAGKAAEAERYKTE 614

Query: 165 IVERYTNSPYVKGAR--FYVTVGRNQL--AAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
           +   +  S + +G +   Y     + L    K+ +    Y ++  Y  A      +L  Y
Sbjct: 615 LTALFPESDFARGLQDPNYFRQVEDVLKVVEKKYQEAYRYYQKVYYHEAAQICDRILKAY 674

Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVS 251
            D +     +       V      EA+  + 
Sbjct: 675 PDNKLKANVLFLKAMCVVNTGSPQEAKNALE 705



 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 40/129 (31%), Gaps = 26/129 (20%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR---------KSL---------LMSA 101
            Y  +   LK    ++A  Y  + +  FP +  AR         +              A
Sbjct: 592 YYLASTTALKAGKAAEAERYKTELTALFPESDFARGLQDPNYFRQVEDVLKVVEKKYQEA 651

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           +  Y    Y +AA + +  +  YP++K    V +L  M              + +     
Sbjct: 652 YRYYQKVYYHEAAQICDRILKAYPDNKLKANVLFLKAMCVVNT--------GSPQEAKNA 703

Query: 162 MSRIVERYT 170
           +  ++    
Sbjct: 704 LEEVIAARP 712


>gi|262171201|ref|ZP_06038879.1| TPR repeat-containing protein [Vibrio mimicus MB-451]
 gi|261892277|gb|EEY38263.1| TPR repeat-containing protein [Vibrio mimicus MB-451]
          Length = 253

 Score = 45.5 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/143 (13%), Positives = 55/143 (38%), Gaps = 14/143 (9%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
            S+ +    + +    ++  Y+ AV   LK++++  A   F +   D+P +  +  S   
Sbjct: 119 SSNDEAAQGTFSSDANEQAAYQNAVDLILKKRDYEGAIAAFKKFQTDYPNSTFSANSHYW 178

Query: 100 SAFVQYSAGKYQQAASLGEEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
              + ++  + ++A    + +I    + +S         +G        D+       + 
Sbjct: 179 LGQLYFAKKEDKEA---AKSFIAVVSHQDSNKRADALVKLG--------DIAKRNNNAEQ 227

Query: 158 MLQYMSRIVERYTNSPYVKGARF 180
             ++  + ++ Y +S   K A+ 
Sbjct: 228 ARKFYQQAIDEYPDSASAKVAKE 250



 Score = 39.3 bits (91), Expect = 0.55,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 46/130 (35%), Gaps = 15/130 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            Q   D+   +R  +  +    +    Y NS +               A     +G+ Y 
Sbjct: 139 YQNAVDLILKKRDYEGAIAAFKKFQTDYPNSTFS--------------ANSHYWLGQLYF 184

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + E   A   F  V+++  D+    +A+ +L +        ++AR+      + YP   
Sbjct: 185 AKKEDKEAAKSFIAVVSH-QDSNKRADALVKLGDIAKRNNNAEQARKFYQQAIDEYPDSA 243

Query: 262 WARYVETLVK 271
            A+  +  +K
Sbjct: 244 SAKVAKESLK 253


>gi|257469130|ref|ZP_05633224.1| TPR repeat-containing protein [Fusobacterium ulcerans ATCC 49185]
          Length = 950

 Score = 45.5 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 86/232 (37%), Gaps = 36/232 (15%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           Y+R +Y+  + +L ++N+ KA E F +  +         +++L  A   Y+   Y++   
Sbjct: 130 YERALYDSGMTYLAKENYKKAEELFQRVIQLN--KKYYSEAVLSMAMSAYNQADYKRTLL 187

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
              EY     ++KN     YL G +Y ++         +T   + Y  ++  +   S Y 
Sbjct: 188 FLNEYSNGKDKNKNQSLFNYLYGSAYYKL--------NSTDDAITYFQKVTSKDKTSSYG 239

Query: 176 KGARFYVTVG----------RNQLAA----KEV-----EIGRYYLKRGEYVAAIPRFQLV 216
           K +   +             +  LA     KE       IG  Y  RGEY  A+  +   
Sbjct: 240 KKSVLSLIEIYSNRGDVNSMQKYLAMLENTKEYGEAMRMIGDLYATRGEYEKAVSYYSKT 299

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER--YPQGYWARYV 266
                +  +  + M     +   L  + EA++    ++    Y Q  +  + 
Sbjct: 300 -----NTPNDPKLMYGYGFSLYKLNRLKEAQKYFEGLRNTTYYNQSIYYIFA 346



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 41/106 (38%), Gaps = 15/106 (14%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           Q+   + +      ++RY +S Y +  +                I + Y  + +Y  AI 
Sbjct: 35  QKKFSMAITESVSFLKRYPDSRYTRNIQDR--------------IAKTYFLQEDYNNAIK 80

Query: 212 RFQLVLANYS-DAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            F+++L N    A+  +E    L+ +Y AL     +   +  + + 
Sbjct: 81  YFKIILMNNDVKAKEKDEINFYLMRSYTALGDAKNSDFFMESLDKN 126



 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 43/224 (19%), Positives = 77/224 (34%), Gaps = 35/224 (15%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA--RKSLLMSAFV 103
           VYL+       +  +Y K + F+    +++A   FNQ   D   +  A   K        
Sbjct: 500 VYLNDEGTENTKDNIYLKGIAFVGMGKYAEADTAFNQLEAD-TTSDAALLTKVKFNKMRN 558

Query: 104 QYSAGKYQQAASLGEEYITQ-YPESKN--VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
            +  GKY+ A   GEEY+T   PE KN  +D     + +SY ++           +   +
Sbjct: 559 YFLWGKYEDAIKYGEEYLTLENPEGKNEIMD----KLAISYFRIDN--------FEKSRE 606

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
           Y +++               Y    R        +I   Y     +  A   ++ V   Y
Sbjct: 607 YYNKL----------SAVPEYEAYCR-------FQIADTYYAEKNFEKAKEEYKHVAEQY 649

Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
            D ++ E+A    +   + L   +   +       +YP      
Sbjct: 650 GDGQYGEKAYYWYLTTLINLGETETFEKEKDAFLVKYPGSKMRD 693


>gi|268590334|ref|ZP_06124555.1| putative tol-pal system protein YbgF [Providencia rettgeri DSM
           1131]
 gi|291314243|gb|EFE54696.1| putative tol-pal system protein YbgF [Providencia rettgeri DSM
           1131]
          Length = 263

 Score = 45.5 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 41/112 (36%), Gaps = 14/112 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             +  +   ++ Y  S Y   A +++                 Y K  +  AA   F  V
Sbjct: 161 QAIGALQGFIKAYPKSGYQSNANYWLGQLN-------------YNKGSKDDAAFY-FATV 206

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           +  Y  ++ + EA+ ++          D+A+ V   + ++YP    ++  E 
Sbjct: 207 VKQYPKSQKSSEALYKVGLIMQDKGQKDKAKAVYQQVLKQYPNSAGSKLAEK 258



 Score = 43.2 bits (101), Expect = 0.035,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 49/133 (36%), Gaps = 12/133 (9%)

Query: 57  QREVYEKAVL-FLKEQ---NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           +++ Y  AV   ++ +      +A        + +P +G    +      + Y+ G    
Sbjct: 139 EKDDYNAAVKLAMESKSKAQIDQAIGALQGFIKAYPKSGYQSNANYWLGQLNYNKGSKDD 198

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           AA      + QYP+S+      Y VG+        +  D+           +++++Y NS
Sbjct: 199 AAFYFATVVKQYPKSQKSSEALYKVGL--------IMQDKGQKDKAKAVYQQVLKQYPNS 250

Query: 173 PYVKGARFYVTVG 185
              K A   ++  
Sbjct: 251 AGSKLAEKKLSTL 263



 Score = 40.1 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 44/155 (28%), Gaps = 43/155 (27%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           ++ +++ A +                K+ +             QA    + +I  YP+S 
Sbjct: 139 EKDDYNAAVKL--AMESK-------SKAQID------------QAIGALQGFIKAYPKSG 177

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
                 Y +G               +      Y + +V++Y  S     A + V +    
Sbjct: 178 YQSNANYWLGQLNYNK--------GSKDDAAFYFATVVKQYPKSQKSSEALYKVGLIMQD 229

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
              K+     Y              Q VL  Y ++
Sbjct: 230 KGQKDKAKAVY--------------QQVLKQYPNS 250


>gi|282877520|ref|ZP_06286338.1| tetratricopeptide repeat protein [Prevotella buccalis ATCC 35310]
 gi|281300344|gb|EFA92695.1| tetratricopeptide repeat protein [Prevotella buccalis ATCC 35310]
          Length = 870

 Score = 45.5 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 21/71 (29%), Gaps = 8/71 (11%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEE 119
           E A    K  N+ +A + + +  +          + L        Y      QA    E 
Sbjct: 646 ENADTEYKRGNYQQAIKDYEELLKK------GVNADLYYNLGNAYYRTDNITQAILAYER 699

Query: 120 YITQYPESKNV 130
            +   P   ++
Sbjct: 700 ALMLSPGDDDI 710


>gi|225620560|ref|YP_002721817.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
 gi|225215379|gb|ACN84113.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
          Length = 257

 Score = 45.5 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/144 (15%), Positives = 53/144 (36%), Gaps = 17/144 (11%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
              + YE+ + + KE+ + +A E F++     P       +       + + G+Y++A  
Sbjct: 2   SSEQYYEEGLNYFKERKYKEAIESFDKVIELAPNNS---NAYYNRGVSKENLGQYKEAIK 58

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
             ++ I   P   ++D+ Y   G++   +           +  ++   + +E   N    
Sbjct: 59  DYDKAIELNPN--DIDF-YNDRGIAKYNL--------GQYEEAIKDYDKAIELNPND--- 104

Query: 176 KGARFYVTVGRNQLAAKEVEIGRY 199
             +     + +  L   E  I  Y
Sbjct: 105 SDSYNNRGIAKKNLGQYEESIKDY 128


>gi|317063377|ref|ZP_07927862.1| tetratricopeptide repeat family protein [Fusobacterium ulcerans
           ATCC 49185]
 gi|313689053|gb|EFS25888.1| tetratricopeptide repeat family protein [Fusobacterium ulcerans
           ATCC 49185]
          Length = 945

 Score = 45.5 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 86/232 (37%), Gaps = 36/232 (15%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           Y+R +Y+  + +L ++N+ KA E F +  +         +++L  A   Y+   Y++   
Sbjct: 125 YERALYDSGMTYLAKENYKKAEELFQRVIQLN--KKYYSEAVLSMAMSAYNQADYKRTLL 182

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
              EY     ++KN     YL G +Y ++         +T   + Y  ++  +   S Y 
Sbjct: 183 FLNEYSNGKDKNKNQSLFNYLYGSAYYKL--------NSTDDAITYFQKVTSKDKTSSYG 234

Query: 176 KGARFYVTVG----------RNQLAA----KEV-----EIGRYYLKRGEYVAAIPRFQLV 216
           K +   +             +  LA     KE       IG  Y  RGEY  A+  +   
Sbjct: 235 KKSVLSLIEIYSNRGDVNSMQKYLAMLENTKEYGEAMRMIGDLYATRGEYEKAVSYYSKT 294

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER--YPQGYWARYV 266
                +  +  + M     +   L  + EA++    ++    Y Q  +  + 
Sbjct: 295 -----NTPNDPKLMYGYGFSLYKLNRLKEAQKYFEGLRNTTYYNQSIYYIFA 341



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 41/106 (38%), Gaps = 15/106 (14%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           Q+   + +      ++RY +S Y +  +                I + Y  + +Y  AI 
Sbjct: 30  QKKFSMAITESVSFLKRYPDSRYTRNIQDR--------------IAKTYFLQEDYNNAIK 75

Query: 212 RFQLVLANYS-DAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            F+++L N    A+  +E    L+ +Y AL     +   +  + + 
Sbjct: 76  YFKIILMNNDVKAKEKDEINFYLMRSYTALGDAKNSDFFMESLDKN 121



 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 43/224 (19%), Positives = 77/224 (34%), Gaps = 35/224 (15%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA--RKSLLMSAFV 103
           VYL+       +  +Y K + F+    +++A   FNQ   D   +  A   K        
Sbjct: 495 VYLNDEGTENTKDNIYLKGIAFVGMGKYAEADTAFNQLEAD-TTSDAALLTKVKFNKMRN 553

Query: 104 QYSAGKYQQAASLGEEYITQ-YPESKN--VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
            +  GKY+ A   GEEY+T   PE KN  +D     + +SY ++           +   +
Sbjct: 554 YFLWGKYEDAIKYGEEYLTLENPEGKNEIMD----KLAISYFRIDN--------FEKSRE 601

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
           Y +++               Y    R        +I   Y     +  A   ++ V   Y
Sbjct: 602 YYNKL----------SAVPEYEAYCR-------FQIADTYYAEKNFEKAKEEYKHVAEQY 644

Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
            D ++ E+A    +   + L   +   +       +YP      
Sbjct: 645 GDGQYGEKAYYWYLTTLINLGETETFEKEKDAFLVKYPGSKMRD 688


>gi|290988442|ref|XP_002676930.1| predicted protein [Naegleria gruberi]
 gi|284090535|gb|EFC44186.1| predicted protein [Naegleria gruberi]
          Length = 249

 Score = 45.5 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 32/235 (13%), Positives = 78/235 (33%), Gaps = 42/235 (17%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
            Y +  +  +  N+S+A + ++     +  F+    + L M     +   ++++A +  E
Sbjct: 30  YYNRGNISRRRGNYSEALKDYDRALELNANFS----QVLTMRGATYFEIEEFEKAIADCE 85

Query: 119 EYITQYP-ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
             I   P ++ N      + G SY +           +  ++   + +++          
Sbjct: 86  RSIALDPSDNCN----LLVRGKSYFK-----------SGNLIAAFADLMDYLKTEQNNSD 130

Query: 178 ARFYVTVGRNQLAA----KE--VEIGR--------YYLK------RGEYVAAIPRFQLVL 217
           A  Y+      +       E  + IG          Y +         Y  AI  +  ++
Sbjct: 131 ALSYLVKLYKIMKQFDTAYEFLLHIGEIEGLSFENVYERAECLEEMKNYPLAIKHWTAIM 190

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQERYPQGYWARYVETLVK 271
            N        E + R  + Y+       A ++  S+I+    +       + L++
Sbjct: 191 DNEPQNPRIMEILLRRGQCYMENKEFSNAIKDFQSVIESTSSENELKESAKQLIQ 245



 Score = 35.5 bits (81), Expect = 9.1,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 47/162 (29%), Gaps = 35/162 (21%)

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
            Y   ++  A       I   P               +     ++   +      L+   
Sbjct: 3   YYRMKEFNGAFDDFTRAIQLNPNDP-----------IHYYNRGNISRRRGNYSEALKDYD 51

Query: 164 RIVERYTNSPYVKGARFY------VTVGRNQLAAKEVEIG-------------RYYLKRG 204
           R +E   N+ + +           +      +A  E  I              + Y K G
Sbjct: 52  RALEL--NANFSQVLTMRGATYFEIEEFEKAIADCERSIALDPSDNCNLLVRGKSYFKSG 109

Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
             +AA   F  ++      ++  +A++ LV+ Y  +   D A
Sbjct: 110 NLIAA---FADLMDYLKTEQNNSDALSYLVKLYKIMKQFDTA 148


>gi|300772773|ref|ZP_07082643.1| OmpA family outer membrane protein [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|300761076|gb|EFK57902.1| OmpA family outer membrane protein [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 628

 Score = 45.5 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 18/122 (14%), Positives = 40/122 (32%), Gaps = 19/122 (15%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYS 106
             +     +++Y  A   L++  +S A E      +   +F  +            +   
Sbjct: 20  KPSGNAKAQQLYTSANRHLQKGEYSPAIELLKEAVKIDGNFA-SAYQT-----LGDLYRK 73

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
             +Y++A  + E+ +   PE         L  ++Y   I +        K  L Y+    
Sbjct: 74  TDQYEEARQMYEKVLKTDPE---------LTPLTYFG-IGESSLFTGHYKEALNYLETYK 123

Query: 167 ER 168
            +
Sbjct: 124 NK 125


>gi|254384605|ref|ZP_04999944.1| conserved hypothetical protein [Streptomyces sp. Mg1]
 gi|194343489|gb|EDX24455.1| conserved hypothetical protein [Streptomyces sp. Mg1]
          Length = 1033

 Score = 45.5 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 66/197 (33%), Gaps = 40/197 (20%)

Query: 70  EQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
            + + +A   F+   +   D+ +A  +R +           G+Y++A +     +   P 
Sbjct: 594 AERYEEAIADFDRSLELRSDYEWALTSRGATFRL------MGRYEEALADFNRAVDLDPG 647

Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
           S    + +   G ++  M R         +  L    R +E   +  +            
Sbjct: 648 S---AWAHASRGAAFNSMGR--------YEEALADFHRAIELKPDYDWP----------- 685

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
             LA +    G  Y   G +  A+  F   +A   D      A+A    +Y +L   +EA
Sbjct: 686 --LAGR----GDVYRSLGRHEEAVAEFTRAIALTPDYWW---ALAGCGYSYTSLGRHEEA 736

Query: 247 REVVSLIQERYPQGYWA 263
             V +      P   WA
Sbjct: 737 VAVFTRAIALAPDDRWA 753


>gi|254434614|ref|ZP_05048122.1| putative PEP-CTERM system TPR-repeat lipoprotein [Nitrosococcus
           oceani AFC27]
 gi|207090947|gb|EDZ68218.1| putative PEP-CTERM system TPR-repeat lipoprotein [Nitrosococcus
           oceani AFC27]
          Length = 926

 Score = 45.5 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 76/201 (37%), Gaps = 39/201 (19%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
            +   + ++  L +++     A   F +  +  P +    + ++  A  Q  AG   ++ 
Sbjct: 704 EHPEVLAQEGWLAMRQNRPQDAIIAFREALKRSPTS----QIIVNLAHAQLQAGNQNESL 759

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
           +  E+++ ++P  +++  V Y +   Y  + ++        +      + +V+R  ++  
Sbjct: 760 ATLEDWLKKHP--EDMV-VQYNLANLYLALKQE--------QKAASAFTTVVKRAPDN-- 806

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
                    V  N LA        + L++ +   A+   +  L    +A    + +  L 
Sbjct: 807 --------VVALNNLA--------WLLRKNDPAKALEYAERALELAPNAPPVMDTLGML- 849

Query: 235 EAYVALALMDEAREVVSLIQE 255
                L    EA+  + L+++
Sbjct: 850 -----LLEKGEAKRSLRLLRK 865



 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 29/71 (40%), Gaps = 3/71 (4%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y + +L  ++Q ++ A   F +     P       ++  +    Y  G+  QA  L  ++
Sbjct: 268 YAQGLLHFQQQQYADALTSFQKTLSKNP--EYMP-AVFYAGIAYYQQGQLTQAGQLLNQF 324

Query: 121 ITQYPESKNVD 131
           + ++P S    
Sbjct: 325 LKRFPHSDTAA 335



 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 45/135 (33%), Gaps = 17/135 (12%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
             + + ++   ++A +  NQ  + FP +  A K+L M    +   G Y  A ++ E  I 
Sbjct: 304 AGIAYYQQGQLTQAGQLLNQFLKRFPHSDTAAKTLAMI---RLREGNYTSAQAILEPIIA 360

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
           Q P                  ++      Q   +    Y  ++  +   S     A   +
Sbjct: 361 QNPNDTAA-----------LDLLGSAILGQGKPEKSAAYFQKVTAQTPES---AAAYMKL 406

Query: 183 TVGRNQLAAKEVEIG 197
            +G       E  IG
Sbjct: 407 GLGFMMSGEHEQGIG 421


>gi|163784310|ref|ZP_02179219.1| hypothetical protein HG1285_06948 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880420|gb|EDP74015.1| hypothetical protein HG1285_06948 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 687

 Score = 45.5 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 61/145 (42%), Gaps = 14/145 (9%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
            L    D   ++  Y  A  F   + + KAYE F + +  +    + R+++L  A   Y+
Sbjct: 539 ELAEGNDEIAKQAGYLYAYSFFSNEEYDKAYEEFKKFAEKYKNDPLGRRAVLRMADSLYN 598

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
            GK  +A  +  ++I +Y  SK      YL+ +    +      ++ + +  LQ     V
Sbjct: 599 LGKEDEAKKIYTQFIKKYAGSKEAVDAAYLLTL----LETKEAGEKSSIEKQLQSF---V 651

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAA 191
           ++Y + P        + + + QL+ 
Sbjct: 652 QKYPDYP-------KIDLLKLQLSE 669



 Score = 41.3 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 85/243 (34%), Gaps = 42/243 (17%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG-- 117
           +Y  A + L  +N+S+A  Y  +  ++     + + SL   A + Y      +  +    
Sbjct: 397 LY-TAFVLLNLENYSEAEFYLKKAYKNASDEKIKQSSLKYLADIYYFNNDDTKFIATLRQ 455

Query: 118 --------------------EEYITQYPESKNVDYVYYLVGMSYAQMIRDVP-------- 149
                               +++   Y  +  VD   Y+  +S   M ++          
Sbjct: 456 IAKFDSKFASDMLGWYFFRKKKFEDAY--NAFVD--TYMKAVSAFNMDKEDTALKLIKNK 511

Query: 150 YDQRA-TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY-YLKRGEYV 207
            D+++       Y+ ++     N    +     +  G +++A +   +  Y +    EY 
Sbjct: 512 NDRKSKFLKAYVYLKKL-----NLDKARKILKELAEGNDEIAKQAGYLYAYSFFSNEEYD 566

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
            A   F+     Y +      A+ R+ ++   L   DEA+++ +   ++Y     A    
Sbjct: 567 KAYEEFKKFAEKYKNDPLGRRAVLRMADSLYNLGKEDEAKKIYTQFIKKYAGSKEAVDAA 626

Query: 268 TLV 270
            L+
Sbjct: 627 YLL 629


>gi|153824999|ref|ZP_01977666.1| transporter [Vibrio cholerae MZO-2]
 gi|153830336|ref|ZP_01983003.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|148874179|gb|EDL72314.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|149741324|gb|EDM55358.1| transporter [Vibrio cholerae MZO-2]
          Length = 628

 Score = 45.5 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 14/133 (10%)

Query: 4   VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63
           +L  A+C+F         F+L + F +++     W    S  +  D      +  E Y +
Sbjct: 309 LLIAALCLFRRGVI----FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMRMFNNEQYAQ 361

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLG 117
           A    ++  +  A  Y+ +          ++ +          A     AG+ Q+A  L 
Sbjct: 362 AAEAFRDPRWQGAARYYAK-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLY 420

Query: 118 EEYITQYPESKNV 130
           E+ + Q P  ++ 
Sbjct: 421 EQVLKQEPNHQDA 433


>gi|159043662|ref|YP_001532456.1| Tol-Pal system YbgF [Dinoroseobacter shibae DFL 12]
 gi|157911422|gb|ABV92855.1| Tol-Pal system YbgF [Dinoroseobacter shibae DFL 12]
          Length = 272

 Score = 45.5 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 31/90 (34%), Gaps = 8/90 (8%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           A ++   +A      G    AA     Y   YP S  V   +YL G + A   +      
Sbjct: 148 AEQADFDAAQALLDNGDAAGAAEAFAAYTQTYPGSPLVAEAHYLRGQAEAAQGQWS---- 203

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYV 182
           RA +  L+  S       + P    A + +
Sbjct: 204 RAARAYLESFSGS----PDGPRAPEALYRL 229



 Score = 42.0 bits (98), Expect = 0.098,   Method: Composition-based stats.
 Identities = 18/122 (14%), Positives = 40/122 (32%), Gaps = 22/122 (18%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
            ++  ++ A   L   + + A E F   ++ +P + +        A   Y  G+ + A  
Sbjct: 148 AEQADFDAAQALLDNGDAAGAAEAFAAYTQTYPGSPL-------VAEAHYLRGQAEAAQG 200

Query: 116 LGEEYITQY-------PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
                   Y       P+        Y +G+S A++ +    D          +  +  R
Sbjct: 201 QWSRAARAYLESFSGSPDGPRAPEALYRLGLSLAELGQ---RD-----EACITLREVSVR 252

Query: 169 YT 170
           + 
Sbjct: 253 FP 254



 Score = 38.9 bits (90), Expect = 0.65,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 37/111 (33%), Gaps = 14/111 (12%)

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
            D        +  +   + Y  SP V  A       R Q A            +G++  A
Sbjct: 160 LDNGDAAGAAEAFAAYTQTYPGSPLVAEAH----YLRGQ-AE---------AAQGQWSRA 205

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
              +    +   D   A EA+ RL  +   L   DEA   +  +  R+P G
Sbjct: 206 ARAYLESFSGSPDGPRAPEALYRLGLSLAELGQRDEACITLREVSVRFPGG 256


>gi|94968620|ref|YP_590668.1| hypothetical protein Acid345_1592 [Candidatus Koribacter versatilis
           Ellin345]
 gi|94550670|gb|ABF40594.1| hypothetical protein Acid345_1592 [Candidatus Koribacter versatilis
           Ellin345]
          Length = 173

 Score = 45.5 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 4/66 (6%)

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE- 248
           A K++E+G YY KR  Y  A+ R+Q  L    +     EA  R+      L  +++AR+ 
Sbjct: 78  AMKDIEVGDYYFKRENYRGALNRYQEALIYKPN---DAEATLRVARTQEKLKEVEDARDN 134

Query: 249 VVSLIQ 254
             + ++
Sbjct: 135 YAAYLK 140


>gi|325287187|ref|YP_004262977.1| hypothetical protein Celly_2286 [Cellulophaga lytica DSM 7489]
 gi|324322641|gb|ADY30106.1| Tetratricopeptide TPR_1 repeat-containing protein [Cellulophaga
           lytica DSM 7489]
          Length = 995

 Score = 45.5 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 44/238 (18%), Positives = 78/238 (32%), Gaps = 26/238 (10%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           +   +  +   YQ+  + + V    EQ++  A E FN    +        ++    A   
Sbjct: 401 EKNKNYASKETYQKVAFYRGVELFLEQDYESALEAFNLSLDNAEEPKFKARANFWKAESL 460

Query: 105 YSAGKYQQAASLGEEYITQYP------ESKNVDY--VY-------YLVGMSYAQMIRDVP 149
           Y   K+  A      +  Q P      E+K +DY   Y       Y+   SY +   D  
Sbjct: 461 YLLNKFDDALVSFVAF-QQNPMSVSTDENKELDYNLAYTYFKLNDYVNATSYYKKYTD-S 518

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
             +   KL   Y+      +  S Y      Y    +N+   K+      Y +   Y   
Sbjct: 519 RPEDEAKLNDAYLRLGDCYFVTSKYWPAIETYNIALKNRGGQKDYAA---YQRALSYGFV 575

Query: 210 ------IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
                 I   +  +  YS +   ++A+  L   Y+ L   D   +  + + E Y    
Sbjct: 576 GKSDTKISELKSFVTKYSKSTLKDDALYELGNTYIKLGNEDLGLQAYNKLIEEYKGSS 633



 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 69/216 (31%), Gaps = 36/216 (16%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT- 122
              +   + ++ A  Y  +          +     +  +  Y  G Y          I  
Sbjct: 239 GESYFNLKQYNNAIPYLTEYKGKR--GKWSNTDYYLLGYSYYKQGDYANGIDQFNNIIDG 296

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
               S+N    YY +   Y ++ +         +  L       +      Y +  +   
Sbjct: 297 DNSVSQN---AYYHLAECYLKLDKK--------QEALNAFKNASQM----DYSEEIKKDA 341

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV---- 238
            +   +L+         Y     Y          L  Y D+EHA+E    LV++Y+    
Sbjct: 342 YLNYARLS---------YEIGNAYEPVPSVLTKYLETYPDSEHAKEIQELLVDSYITSKN 392

Query: 239 ---ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
              AL L+++ +   S  +E Y +  + R VE  ++
Sbjct: 393 YKGALELLEKNKNYAS--KETYQKVAFYRGVELFLE 426



 Score = 38.9 bits (90), Expect = 0.77,   Method: Composition-based stats.
 Identities = 26/204 (12%), Positives = 61/204 (29%), Gaps = 21/204 (10%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y++A+ +                   +  + +   +L          G          + 
Sbjct: 566 YQRALSYGFVGKSDTKISELKSFVTKYSKSTLKDDALYELGNTYIKLGNEDLGLQAYNKL 625

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRD---------VPYDQRATKLMLQYMSRIVERYTN 171
           I +Y  S  V       G+ +    R+         V  D   T+  +Q ++     Y +
Sbjct: 626 IEEYKGSSLVPRALLRQGLVHYNASRNQQALAKFKTVVRDHAKTQEAIQAVATAKLVYVD 685

Query: 172 SPYVKGARFYVTVGRNQ----LAAKEVEIGRYYLKRGEYV-----AAIPRFQLVLANYSD 222
              +     Y    ++     +   E++   Y     +++     AAI  ++  +  + +
Sbjct: 686 ---LGKVDEYANWVKDLDFVEVTDSELDNATYESAEKQFIENKTDAAIRGYENYIKEFPN 742

Query: 223 AEHAEEAMARLVEAYVALALMDEA 246
             H  +A  +L + Y        A
Sbjct: 743 GSHILDANFKLAQLYFGKGQKASA 766



 Score = 35.9 bits (82), Expect = 5.9,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 72/209 (34%), Gaps = 32/209 (15%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           +         + +  A  Y N+ +    +     ++     ++ Y    YQ+A    E +
Sbjct: 132 FNNGYALFSSKKYKDAERYLNRVTNSATYGS---QAKYYLGYIAYEQDNYQEAN---ERF 185

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYD-------------QRATKLMLQYMSRIV- 166
                + +  +       +SY Q   +                  +A +  +  +++I+ 
Sbjct: 186 DQITDQDELKE------KLSYYQADMNFKLGNFEKAIALAKEQLPKADRNEVSELNKIIG 239

Query: 167 ERYTNSPYVKGARFYVTVG---RNQLAAKEVEIGRY-YLKRGEYVAAIPRFQLVLANYSD 222
           E Y N      A  Y+T     R + +  +  +  Y Y K+G+Y   I +F  ++    D
Sbjct: 240 ESYFNLKQYNNAIPYLTEYKGKRGKWSNTDYYLLGYSYYKQGDYANGIDQFNNIIDG--D 297

Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVS 251
              ++ A   L E Y+ L    EA     
Sbjct: 298 NSVSQNAYYHLAECYLKLDKKQEALNAFK 326


>gi|151943403|gb|EDN61714.1| protein phosphatase T [Saccharomyces cerevisiae YJM789]
 gi|190406859|gb|EDV10126.1| serine/threonine-protein phosphatase T [Saccharomyces cerevisiae
           RM11-1a]
 gi|207345090|gb|EDZ72025.1| YGR123Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256270344|gb|EEU05550.1| Ppt1p [Saccharomyces cerevisiae JAY291]
 gi|259146625|emb|CAY79882.1| Ppt1p [Saccharomyces cerevisiae EC1118]
 gi|323354816|gb|EGA86649.1| Ppt1p [Saccharomyces cerevisiae VL3]
          Length = 513

 Score = 45.5 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 50/133 (37%), Gaps = 20/133 (15%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLL--MSAFVQY 105
            +  D     E   +  +F+KE++F KA E +      D      + +S+     AF  +
Sbjct: 4   PTAADRAKALERKNEGNVFVKEKHFLKAIEKYTEAIDLD------STQSIYFSNRAFAHF 57

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               +Q A +  +E I   P++      Y+   +S   ++          K   + ++ +
Sbjct: 58  KVDNFQSALNDCDEAIKLDPKNIK---AYHRRALSCMALLE--------FKKARKDLNVL 106

Query: 166 VERYTNSPYVKGA 178
           ++   N P    A
Sbjct: 107 LKAKPNDPAATKA 119


>gi|91978604|ref|YP_571263.1| hypothetical protein RPD_4143 [Rhodopseudomonas palustris BisB5]
 gi|91685060|gb|ABE41362.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
          Length = 345

 Score = 45.5 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 32/115 (27%), Gaps = 14/115 (12%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
                        Y  A      + T+YP         Y +G SY Q         +  +
Sbjct: 224 EFDLGIGYMQRRDYALAEETMRNFATKYPNDALTPDSQYWLGESYFQR--------QMYR 275

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV------EIGRYYLKRGE 205
              +    +  +Y  S     A   +    + L  KE       EIGR Y K   
Sbjct: 276 DSAEAFLAVTSKYDKSAKAPDALLRLGQSLSALKEKEAACAALGEIGRKYPKASA 330



 Score = 44.0 bits (103), Expect = 0.025,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 42/110 (38%), Gaps = 14/110 (12%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           +R   L  + M     +Y N      +++++              G  Y +R  Y  +  
Sbjct: 234 RRDYALAEETMRNFATKYPNDALTPDSQYWL--------------GESYFQRQMYRDSAE 279

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            F  V + Y  +  A +A+ RL ++  AL   + A   +  I  +YP+  
Sbjct: 280 AFLAVTSKYDKSAKAPDALLRLGQSLSALKEKEAACAALGEIGRKYPKAS 329


>gi|323304870|gb|EGA58628.1| Ppt1p [Saccharomyces cerevisiae FostersB]
          Length = 513

 Score = 45.1 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 50/133 (37%), Gaps = 20/133 (15%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLL--MSAFVQY 105
            +  D     E   +  +F+KE++F KA E +      D      + +S+     AF  +
Sbjct: 4   PTAADRAKALERKNEGNVFVKEKHFLKAIEKYTEAIDLD------STQSIYFSNRAFAHF 57

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               +Q A +  +E I   P++      Y+   +S   ++          K   + ++ +
Sbjct: 58  KVDNFQSALNDCDEAIKLDPKNIK---AYHRRALSCMALLE--------FKKARKDLNVL 106

Query: 166 VERYTNSPYVKGA 178
           ++   N P    A
Sbjct: 107 LKAKPNDPAATKA 119


>gi|295094812|emb|CBK83903.1| Tetratricopeptide repeat. [Coprococcus sp. ART55/1]
          Length = 272

 Score = 45.1 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 80/233 (34%), Gaps = 24/233 (10%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARK-SLLMSAFVQYSAGKYQ 111
           V  + E+Y++ V + K  ++ +A + F+   + +  F+    +   L  A     + +Y 
Sbjct: 42  VSQKDELYDQGVKYYKSGSYQEAIDSFDNALAENQLFSKKKDQNIKLYLADAYLKSAQYT 101

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           +AA+   E I       NV     L  ++ A       + Q      L  + +  E Y  
Sbjct: 102 EAANTYNELIQDSFTGSNVKD---LKELATAL----SDFSQGNYGGALDVLLKQAETYPE 154

Query: 172 -SPYVKGARFYVTVGRNQLAAKEVEI-------------GRYYLKRGEYVAAIPRFQLVL 217
              Y+               + E  +             G YYL  G+  +AI      L
Sbjct: 155 LYMYIGTCYAVTDESDKMFESYEKYVQTFGFNSYVYAMYGSYYLNNGDMESAIAYITNGL 214

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
            +  D  + +E +   +  Y      D+A E+   +   YP     +   T +
Sbjct: 215 DS-GDKIYRKELLMLEITYYEKNEDYDKAYEIAGQLVSEYPDYEKGQKEYTFL 266


>gi|254428325|ref|ZP_05042032.1| tetratricopeptide repeat domain protein [Alcanivorax sp. DG881]
 gi|196194494|gb|EDX89453.1| tetratricopeptide repeat domain protein [Alcanivorax sp. DG881]
          Length = 566

 Score = 45.1 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 17/134 (12%), Positives = 43/134 (32%), Gaps = 19/134 (14%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK--YQQAASLG 117
           +  +A    ++ N     E   Q +  +P      ++ L  A   +   +   + A    
Sbjct: 150 LVNQARGLDEQGNLQL-VEALAQLTDSYP-----DQAPLWYARALWLEHEKQPEPALDAT 203

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           E  +   P  ++      L      +            +  L+++ ++V +Y  +   + 
Sbjct: 204 ERTLKLMPRHED---ALLLKAQLLYET--------GEPQKALRHLKKLVRKYPQARRPRI 252

Query: 178 ARFYVTVGRNQLAA 191
           A   + +   QL  
Sbjct: 253 AYVRMLLATGQLEE 266


>gi|317154864|ref|YP_004122912.1| cell wall hydrolase/autolysin [Desulfovibrio aespoeensis Aspo-2]
 gi|316945115|gb|ADU64166.1| cell wall hydrolase/autolysin [Desulfovibrio aespoeensis Aspo-2]
          Length = 614

 Score = 45.1 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 41/133 (30%), Gaps = 25/133 (18%)

Query: 80  FNQCSRDF-------PFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYP 125
           + +  + F       P    A K+L     V    G        +++A       +++YP
Sbjct: 61  WEKVEQRFSQCLRADPDGPNAPKALYYIGRVHEELGVQSGSGADFRRAIDYFGRVVSRYP 120

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
                D   Y      A+ +++       T+     ++RI+  Y  S             
Sbjct: 121 RHGWADDCLYRRADINARRLKE-------TEAARLDLARILVEYPRS----DMYAKADAA 169

Query: 186 RNQLAAKEVEIGR 198
             +L   +  + +
Sbjct: 170 LRKLGGYDKAVAK 182



 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 46/128 (35%), Gaps = 14/128 (10%)

Query: 151 DQRATK------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
           D R  K       + Q  S+ +    + P    A +Y+     +L  +      +  +R 
Sbjct: 51  DPRKAKYRANWEKVEQRFSQCLRADPDGPNAPKALYYIGRVHEELGVQSGSGADF--RR- 107

Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY-VALALMDEAREVVSLIQERYPQGYWA 263
               AI  F  V++ Y     A++ + R  +     L   + AR  ++ I   YP+    
Sbjct: 108 ----AIDYFGRVVSRYPRHGWADDCLYRRADINARRLKETEAARLDLARILVEYPRSDMY 163

Query: 264 RYVETLVK 271
              +  ++
Sbjct: 164 AKADAALR 171


>gi|225011907|ref|ZP_03702345.1| TPR repeat-containing protein [Flavobacteria bacterium MS024-2A]
 gi|225004410|gb|EEG42382.1| TPR repeat-containing protein [Flavobacteria bacterium MS024-2A]
          Length = 1008

 Score = 45.1 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 65/172 (37%), Gaps = 28/172 (16%)

Query: 61  YEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           Y+ A ++ K   ++ A ++F      +  F  +   R + L     +++  +Y  A    
Sbjct: 503 YDIAYIYFKLGEYAFALKFFKEFNAVNSSFNQS-YQRDTFLRMGDCEFALKQYWSAMEFY 561

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
              I     S+   Y  Y  G+SY  + R++          ++ + ++ + Y   P +  
Sbjct: 562 NTAIALN--SEQGAYAMYQKGISYGFVDRNLKK--------IETLLQLTQTYLKDPLLDD 611

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
           A                E+   Y +    + AI  + L+L+NY ++ +   A
Sbjct: 612 AL--------------FELASSYSRESNTIKAIETYDLLLSNYKNSPYTPRA 649



 Score = 35.5 bits (81), Expect = 8.9,   Method: Composition-based stats.
 Identities = 28/233 (12%), Positives = 77/233 (33%), Gaps = 46/233 (19%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D      ++E A  + +E N  KA E ++    ++  +    ++ L    + Y+  +Y +
Sbjct: 606 DPLLDDALFELASSYSRESNTIKAIETYDLLLSNYKNSPYTPRAGLNKGLILYNKERYIE 665

Query: 113 AASLGEEYITQYPESKNV------------------DYVYYLVGMSYAQMIRDVPYDQRA 154
           A ++ E+   +Y                         +  ++          D+  ++ A
Sbjct: 666 AKTILEDIAIKYRRDPVAQQAVRTLREIAVDQAEVSAFAQWVKTQ-NLNTFSDIELEKTA 724

Query: 155 ------------TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
                       T    + +   +E Y    +   A FY+                 Y +
Sbjct: 725 FTSAEKQFLDGNTNTAEKLLKEYIETYPQGVFGNPAGFYLAEI--------------YFE 770

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           +   + A+P +Q ++     + + E+++ +++          E+   +  + +
Sbjct: 771 KELSIEALPFYQAIVNQ-QVSSYTEKSLVQIITLLKKEGRQAESITYLEKLDQ 822


>gi|254286662|ref|ZP_04961617.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|150423246|gb|EDN15192.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
          Length = 525

 Score = 45.1 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 14/133 (10%)

Query: 4   VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63
           +L  A+C+F         F+L + F +++     W    S  +  D      +  E Y +
Sbjct: 309 LLIAALCLFRRGVI----FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMRMFNNEQYAQ 361

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLG 117
           A    ++  +  A  Y+ +          ++ +          A     AG+ Q+A  L 
Sbjct: 362 AAEAFRDPRWQGAARYYAK-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLY 420

Query: 118 EEYITQYPESKNV 130
           E+ + Q P  ++ 
Sbjct: 421 EQVLKQEPNHQDA 433


>gi|283780558|ref|YP_003371313.1| TPR repeat-containing protein [Pirellula staleyi DSM 6068]
 gi|283439011|gb|ADB17453.1| TPR repeat-containing protein [Pirellula staleyi DSM 6068]
          Length = 548

 Score = 45.1 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 54/142 (38%), Gaps = 21/142 (14%)

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
            +  L  A   Y    Y+ AA+  E++++ Y ES    +      ++  Q+       Q 
Sbjct: 52  ERYQLQIAEKYYRDQDYKVAAAEYEKFLSLYEESVGAPHAQLRWSLAQVQL-----RKQN 106

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
                 +    +++ +  S     A+FY+              GR Y + G    A    
Sbjct: 107 TAIK--EGFQSVIDYWPESQQAIAAKFYM--------------GRTYKEIGRVAEAKKTL 150

Query: 214 QLVLANYSDAEHAEEAMARLVE 235
           + ++ ++   + A +A+ +L++
Sbjct: 151 RALVKDHPAHQVAVQAIEQLID 172



 Score = 42.8 bits (100), Expect = 0.051,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 41/109 (37%), Gaps = 14/109 (12%)

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
            DQ   K+      + +  Y  S     A+   ++ + QL             R +  A 
Sbjct: 64  RDQ-DYKVAAAEYEKFLSLYEESVGAPHAQLRWSLAQVQL-------------RKQNTAI 109

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
              FQ V+  + +++ A  A   +   Y  +  + EA++ +  + + +P
Sbjct: 110 KEGFQSVIDYWPESQQAIAAKFYMGRTYKEIGRVAEAKKTLRALVKDHP 158


>gi|189465627|ref|ZP_03014412.1| hypothetical protein BACINT_01985 [Bacteroides intestinalis DSM
           17393]
 gi|189437901|gb|EDV06886.1| hypothetical protein BACINT_01985 [Bacteroides intestinalis DSM
           17393]
          Length = 279

 Score = 45.1 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 12/122 (9%), Positives = 32/122 (26%), Gaps = 14/122 (11%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE----------KAVLFL 68
           + K     F  + +      +  S      +    +    E             +     
Sbjct: 2   MKKILFFTFVGLLMALTSSGQTTSDTLQQANDSVTIGSHTEFSAAVQENSVTKAEGDSAY 61

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
            + +++ A + +    ++      A           Y AG   +A    E  +   P + 
Sbjct: 62  VKNDYASAIQIYEALLKE---GEAAE-VYYNLGNSYYKAGDIAKAILNYERALLIQPGNA 117

Query: 129 NV 130
           ++
Sbjct: 118 DI 119


>gi|311747868|ref|ZP_07721653.1| hypothetical protein ALPR1_16119 [Algoriphagus sp. PR1]
 gi|126575861|gb|EAZ80171.1| hypothetical protein ALPR1_16119 [Algoriphagus sp. PR1]
          Length = 550

 Score = 45.1 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 10/93 (10%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+KA  FLK +N+ +A   F +      +  +A  +        Y A + +QA    +  
Sbjct: 26  YQKAQDFLKSKNYWEAMPLFREFLDAEKYGNLANYAAFHLGEAAYRANQPEQAIEALK-- 83

Query: 121 ITQYPESKNV----DYVYYLVGMSYAQMIRDVP 149
               P +  V    D   YL+ ++Y Q  ++V 
Sbjct: 84  ----PIASKVWTKSDESNYLLALAYFQNQQNVE 112


>gi|32471678|ref|NP_864671.1| DNA-directed RNA polymerase alpha chain [Rhodopirellula baltica SH
           1]
 gi|32397049|emb|CAD72353.1| probable DNA-directed RNA polymerase alpha chain [Rhodopirellula
           baltica SH 1]
 gi|327539093|gb|EGF25725.1| RNA polymerase alpha subunit domain protein [Rhodopirellula baltica
           WH47]
          Length = 500

 Score = 45.1 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 46/131 (35%), Gaps = 6/131 (4%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
           +     + G   ++         TD  +   ++  A+   +  N  +A   + + ++ FP
Sbjct: 220 AATAAQIGGRMEEAINLYQRAVSTDENHAGALFGLALENDRLGNDDEALRLYERAAKAFP 279

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV-GMSYAQMIRD 147
                  +L+    +    G+Y +A    +  +  +P+        Y+    +   M+ D
Sbjct: 280 TG---IGALINLGVMYEDNGQYDKAQLCYKRILDCHPDHPRTQ--LYMKDASATGNMLYD 334

Query: 148 VPYDQRATKLM 158
               +R  +L 
Sbjct: 335 EEAQRRNDRLA 345


>gi|261377462|ref|ZP_05982035.1| putative periplasmic protein [Neisseria cinerea ATCC 14685]
 gi|269146190|gb|EEZ72608.1| putative periplasmic protein [Neisseria cinerea ATCC 14685]
          Length = 238

 Score = 45.1 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 17/125 (13%), Positives = 42/125 (33%), Gaps = 11/125 (8%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
             ++ +Y +A+   +   FS A               +A++S+ +    +   G  +   
Sbjct: 117 PTEQSLYNQALKHYQNGRFSAAAALLKGADGGD-GGSIAQRSMYLLLQSRARMGNCESVI 175

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
            +G  Y  ++  +       + +G    +   +D+                +++ Y  SP
Sbjct: 176 EIGRRYANRFKGTPAAPEAIFKIGECQYRLQQKDIAR---------ATWRGLIQAYPGSP 226

Query: 174 YVKGA 178
             K A
Sbjct: 227 AAKRA 231



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 26/73 (35%), Gaps = 16/73 (21%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +EIGR Y           RF+           A EA+ ++ E    L   D AR     +
Sbjct: 175 IEIGRRY---------ANRFK-------GTPAAPEAIFKIGECQYRLQQKDIARATWRGL 218

Query: 254 QERYPQGYWARYV 266
            + YP    A+  
Sbjct: 219 IQAYPGSPAAKRA 231


>gi|118357157|ref|XP_001011828.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89293595|gb|EAR91583.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 494

 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 56/186 (30%), Gaps = 34/186 (18%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
             L L+  N  K+  +F +  +  P        L    F  Y  G Y +A S  ++    
Sbjct: 317 GQLHLRNGNIEKSKIFFEKILKIRPNQSY---ILNNLGFAYYLEGDYSKAISYYQQSQEI 373

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
            P       VY          +  +  +Q   +  +Q   + +    N            
Sbjct: 374 NPN------VY-----DTFNNLGLIYQNQGFAEQAIQQYVKAINILPN----------FA 412

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
              N L       G  Y + GE+  AI  +              +++  +   Y  +  +
Sbjct: 413 EALNNL-------GSIYFQIGEFGTAIYYYMEAQEADPQFLEPYKSLGYI---YKKIGQV 462

Query: 244 DEAREV 249
           +EA  +
Sbjct: 463 EEANNI 468



 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 59/172 (34%), Gaps = 15/172 (8%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM---IRDVPYDQRATKLMLQY 161
           Y  GK+Q A     E +       NV Y+Y  +G  Y Q     + +   Q+A +     
Sbjct: 11  YKQGKFQDALQTFNELLQINTFKSNVPYIYNTIGSIYEQQNMKDQAIKQYQKALENEPSD 70

Query: 162 MSRIVE----RYTNSPYVKGARFYVTVGRNQLAAKEVE----IGRYYLKRGEYVAAIPRF 213
              ++      + +   VK A   +    + L            ++Y    +   AI  +
Sbjct: 71  YEALINLGNLYFFDKNMVKEANECIKKALD-LNPNCFFTWYKAAKFYDNSNQNQEAIYNY 129

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
           +  L+ +       E +  L + Y  +    EA +    + +   + Y+  +
Sbjct: 130 KKALSIFPRDS---EILYSLAQIYHKIGNNQEAIKFEEKVIKNNQKEYYFHF 178


>gi|126642009|ref|YP_001084993.1| putative signal peptide [Acinetobacter baumannii ATCC 17978]
          Length = 239

 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 42/120 (35%), Gaps = 17/120 (14%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG--EYVAA 209
           Q   K  +  M   ++ + NS Y   A F++                ++L      Y  A
Sbjct: 134 QGGAKKAIAPMQNFIKNHPNSIYTGNAYFWL--------------AEFHLATDPVNYNEA 179

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVE-AYVALALMDEAREVVSLIQERYPQGYWARYVET 268
              + +V   Y ++  A  A+ +L   A         A +  + +  +YP+   A++   
Sbjct: 180 KKNYNVVANQYPNSSKAPRALYQLYSIAKDVDKNTVSANQYKNKLLSQYPKSEEAKFFNK 239



 Score = 42.4 bits (99), Expect = 0.059,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 41/122 (33%), Gaps = 9/122 (7%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG--KYQQAA 114
           ++  Y  A+   K+    KA        ++ P +     +    A    +     Y +A 
Sbjct: 121 EKAAYTVALDAYKQGGAKKAIAPMQNFIKNHPNSIYTGNAYFWLAEFHLATDPVNYNEAK 180

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
                   QYP S       Y +      + +DV    + T    QY ++++ +Y  S  
Sbjct: 181 KNYNVVANQYPNSSKAPRALYQL----YSIAKDVD---KNTVSANQYKNKLLSQYPKSEE 233

Query: 175 VK 176
            K
Sbjct: 234 AK 235



 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 28/79 (35%), Gaps = 8/79 (10%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR-DVPYDQRATKLMLQYMS 163
           Y  G  ++A +  + +I  +P S          G +Y  +    +  D        +  +
Sbjct: 132 YKQGGAKKAIAPMQNFIKNHPNSIYT-------GNAYFWLAEFHLATDPVNYNEAKKNYN 184

Query: 164 RIVERYTNSPYVKGARFYV 182
            +  +Y NS     A + +
Sbjct: 185 VVANQYPNSSKAPRALYQL 203


>gi|6321562|ref|NP_011639.1| Ppt1p [Saccharomyces cerevisiae S288c]
 gi|1709746|sp|P53043|PPT1_YEAST RecName: Full=Serine/threonine-protein phosphatase T; Short=PPT
 gi|642346|emb|CAA58158.1| serine/threonine phosphatase [Saccharomyces cerevisiae]
 gi|1323201|emb|CAA97134.1| PPT1 [Saccharomyces cerevisiae]
 gi|45270080|gb|AAS56421.1| YGR123C [Saccharomyces cerevisiae]
 gi|285812316|tpg|DAA08216.1| TPA: Ppt1p [Saccharomyces cerevisiae S288c]
          Length = 513

 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 50/133 (37%), Gaps = 20/133 (15%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLL--MSAFVQY 105
            +  D     E   +  +F+KE++F KA E +      D      + +S+     AF  +
Sbjct: 4   PTAADRAKALERKNEGNVFVKEKHFLKAIEKYTEAIDLD------STQSIYFSNRAFAHF 57

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               +Q A +  +E I   P++      Y+   +S   ++          K   + ++ +
Sbjct: 58  KVDNFQSALNDCDEAIKLDPKNIK---AYHRRALSCMALLE--------FKKARKDLNVL 106

Query: 166 VERYTNSPYVKGA 178
           ++   N P    A
Sbjct: 107 LKAKPNDPAATKA 119


>gi|186686296|ref|YP_001869492.1| hypothetical protein Npun_R6265 [Nostoc punctiforme PCC 73102]
 gi|186468748|gb|ACC84549.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC
           73102]
          Length = 226

 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 43/125 (34%), Gaps = 20/125 (16%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP---FAGVARKSLLMSAFVQYS 106
           S T    + ++ ++A     + + + A E   +  + FP   F             V + 
Sbjct: 59  SDTGPSERSQMLQQANALFNQGDLTGAEENLRKLIKKFPDDAFGHFQ------LGNVLFR 112

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
             K ++A S  +E I    +SK     Y  +GM YA   R            +    + +
Sbjct: 113 QKKPEEAISAYQEAIRL--QSKYA-LAYNAIGMVYASQSR--------WDEAMTEYKKAL 161

Query: 167 ERYTN 171
           E   N
Sbjct: 162 EINPN 166


>gi|291278873|ref|YP_003495708.1| hypothetical protein DEFDS_0458 [Deferribacter desulfuricans SSM1]
 gi|290753575|dbj|BAI79952.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
          Length = 530

 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 80/216 (37%), Gaps = 38/216 (17%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
             +RD+YL  +    Y   +Y  A ++    +++  A +Y ++  +           LL 
Sbjct: 78  DEARDLYLKFLEKEDYPGILYNLANIYKTYYKDYDSAIKYLSKLIKI----EKREGYLLE 133

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
              +    G Y +A  + +E I   P S      YY  G  Y ++            L  
Sbjct: 134 LMKLYELKGDYAKAIGVLDELIGLNPSSAY----YYQRGTLYLKL-----------GLEK 178

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
           + +  + + Y N  Y              LA  ++    YYLK+G+   A+     V+  
Sbjct: 179 KGLKDLEQAYKNDKYP-------------LALYKL--ADYYLKKGDKEKAVKYLSSVVNK 223

Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           + +    +    +L   Y+ L   D+A E+   +++
Sbjct: 224 HPEQASLK---FQLGRLYMDLKEYDKAVEIFEELEK 256


>gi|153214418|ref|ZP_01949389.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|124115367|gb|EAY34187.1| conserved hypothetical protein [Vibrio cholerae 1587]
          Length = 644

 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 14/133 (10%)

Query: 4   VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63
           +L  A+C+F         F+L + F +++     W    S  +  D      +  E Y +
Sbjct: 309 LLIAALCLFRRGVI----FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMRMFNNEQYAQ 361

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLG 117
           A    ++  +  A  Y+ +          ++ +          A     AG+ Q+A  L 
Sbjct: 362 AAEAFRDPRWQGAARYYAK-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLY 420

Query: 118 EEYITQYPESKNV 130
           E+ + Q P  ++ 
Sbjct: 421 EQVLKQEPNHQDA 433


>gi|91201683|emb|CAJ74743.1| unknown protein [Candidatus Kuenenia stuttgartiensis]
          Length = 237

 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 79/220 (35%), Gaps = 46/220 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           +K + F +++ + +A + F +    +++   A              Y+ G   ++ +  +
Sbjct: 29  KKGLSFFEQKKYDEAIDAFKKALEINKNHYDAHYG------LGVAYYTKGMIDESLTELK 82

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK-- 176
             I   PE      V Y +  +Y           + T   +Q     ++ +++   VK  
Sbjct: 83  RAIELNPEEPK---VRYNIAFAYMAK--------QMTMEAIQEYKTAIDLFSSKKDVKKE 131

Query: 177 -GARFYVTVGRNQLAAK---------------EVEIGRY-----YLKRGEYVAAIPRFQL 215
             A  Y++V  + +                  E+E G Y     Y K   Y  AI   + 
Sbjct: 132 AEAHLYLSVAYSLMENHDEALLACKKAIALNPELEDGHYFLGVCYYKNNMYDEAIAALKK 191

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
            +        AE+A + L   Y  L +++EA     ++Q+
Sbjct: 192 TIMLNPK---AEKAHSVLHVIYDKLGMVEEATSERFILQQ 228


>gi|329893687|ref|ZP_08269821.1| TPR repeat containing exported protein [gamma proteobacterium
           IMCC3088]
 gi|328923614|gb|EGG30926.1| TPR repeat containing exported protein [gamma proteobacterium
           IMCC3088]
          Length = 295

 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 45/129 (34%), Gaps = 13/129 (10%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
               R + YD++     +   +  +  Y +  Y   A +++      L    +E     L
Sbjct: 176 YLAARQLVYDRK-FDDAVASFNEFLLDYPDGAYAPNAHYWLGELYLVLEQPNLE-----L 229

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            R         FQL+L  Y       +A  +L   Y A    + A+ ++  +   YP+  
Sbjct: 230 SRQA-------FQLLLDLYPQHNKVPDASFKLATVYFAKGNAERAKTMLEAVIATYPKQP 282

Query: 262 WARYVETLV 270
            A   +  +
Sbjct: 283 VAELAKKFL 291



 Score = 45.1 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 16/132 (12%), Positives = 37/132 (28%), Gaps = 10/132 (7%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ--YSAG 108
                 +   Y  A   + ++ F  A   FN+   D+P    A  +      +       
Sbjct: 166 PPADAKEEPAYLAARQLVYDRKFDDAVASFNEFLLDYPDGAYAPNAHYWLGELYLVLEQP 225

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
             + +    +  +  YP+   V    + +   Y              +     +  ++  
Sbjct: 226 NLELSRQAFQLLLDLYPQHNKVPDASFKLATVYFAK--------GNAERAKTMLEAVIAT 277

Query: 169 YTNSPYVKGARF 180
           Y   P  + A+ 
Sbjct: 278 YPKQPVAELAKK 289



 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 44/131 (33%), Gaps = 20/131 (15%)

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
             K+  A +   E++  YP+       +Y +G  Y      +  +Q   +L  Q    ++
Sbjct: 185 DRKFDDAVASFNEFLLDYPDGAYAPNAHYWLGELY------LVLEQPNLELSRQAFQLLL 238

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
           + Y     V  A F +                 Y  +G    A    + V+A Y     A
Sbjct: 239 DLYPQHNKVPDASFKL--------------ATVYFAKGNAERAKTMLEAVIATYPKQPVA 284

Query: 227 EEAMARLVEAY 237
           E A   L + Y
Sbjct: 285 ELAKKFLADKY 295


>gi|255746017|ref|ZP_05419964.1| TPR domain protein in aerotolerance operon [Vibrio cholera CIRS
           101]
 gi|262162144|ref|ZP_06031159.1| TPR domain protein in aerotolerance operon [Vibrio cholerae INDRE
           91/1]
 gi|255735771|gb|EET91169.1| TPR domain protein in aerotolerance operon [Vibrio cholera CIRS
           101]
 gi|262028219|gb|EEY46877.1| TPR domain protein in aerotolerance operon [Vibrio cholerae INDRE
           91/1]
          Length = 632

 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 48/133 (36%), Gaps = 14/133 (10%)

Query: 4   VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63
           +L  A+C+F         F+L + F +++     W    S  +  D      +  E Y +
Sbjct: 309 LLIAALCLFRRGVI----FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMRMFNNEQYAQ 361

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLG 117
           A    ++  +  A  Y+ +          ++ +          A     AG+ Q+A  L 
Sbjct: 362 AAEAFRDPRWQGAARYYAK-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLY 420

Query: 118 EEYITQYPESKNV 130
           E  + Q P  ++ 
Sbjct: 421 EHVLKQEPNHQDA 433


>gi|229605141|ref|YP_002875845.1| TPR domain protein in aerotolerance operon [Vibrio cholerae
           MJ-1236]
 gi|229371627|gb|ACQ62049.1| TPR domain protein in aerotolerance operon [Vibrio cholerae
           MJ-1236]
          Length = 624

 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 48/133 (36%), Gaps = 14/133 (10%)

Query: 4   VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63
           +L  A+C+F         F+L + F +++     W    S  +  D      +  E Y +
Sbjct: 309 LLIAALCLFRRGVI----FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMRMFNNEQYAQ 361

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLG 117
           A    ++  +  A  Y+ +          ++ +          A     AG+ Q+A  L 
Sbjct: 362 AAEAFRDPRWQGAARYYAK-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLY 420

Query: 118 EEYITQYPESKNV 130
           E  + Q P  ++ 
Sbjct: 421 EHVLKQEPNHQDA 433


>gi|229517330|ref|ZP_04406775.1| TPR domain protein in aerotolerance operon [Vibrio cholerae RC9]
 gi|229345366|gb|EEO10339.1| TPR domain protein in aerotolerance operon [Vibrio cholerae RC9]
          Length = 652

 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 48/133 (36%), Gaps = 14/133 (10%)

Query: 4   VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63
           +L  A+C+F         F+L + F +++     W    S  +  D      +  E Y +
Sbjct: 309 LLIAALCLFRRGVI----FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMRMFNNEQYAQ 361

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLG 117
           A    ++  +  A  Y+ +          ++ +          A     AG+ Q+A  L 
Sbjct: 362 AAEAFRDPRWQGAARYYAK-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLY 420

Query: 118 EEYITQYPESKNV 130
           E  + Q P  ++ 
Sbjct: 421 EHVLKQEPNHQDA 433


>gi|223937543|ref|ZP_03629446.1| Tetratricopeptide domain protein [bacterium Ellin514]
 gi|223893706|gb|EEF60164.1| Tetratricopeptide domain protein [bacterium Ellin514]
          Length = 900

 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 21/159 (13%), Positives = 52/159 (32%), Gaps = 24/159 (15%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           N + A +         P + ++ +  L  A      G +Q A +  +  I     S  + 
Sbjct: 527 NPAGARDLLQMFIEKSPTSPLSSEVRLAIAHTYEKEGNWQAAITNYDRLIVDSTNSAVLP 586

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
            V +   M+  +                  ++  V +++ +     A+++          
Sbjct: 587 RVEFSRAMANFRA--------GYETNAYSILTNFVVKFSTNQLAAKAKYW---------- 628

Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
               IG Y+ ++ ++  A   ++ V  N+       E +
Sbjct: 629 ----IGDYFWRQEDFPRAERSYKEVYQNWP--AATNEGL 661



 Score = 40.9 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 32/242 (13%), Positives = 76/242 (31%), Gaps = 43/242 (17%)

Query: 71  QNFSKAYEYFNQCSR-DFPFAGVA--RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
              + A E +    +        A  R+++     +     K   A    + +++++PE 
Sbjct: 278 GRLADAVEVYENFEKKLSAETPKALRRQAIYKIVDLNLKQNKLDIATQKLDSFLSKFPED 337

Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRAT----------KLMLQYMSRIVERYTNSPYVKG 177
           +  D     +G    +                       L      +++  +TNS +V  
Sbjct: 338 RTADVALLTLGELQLRQATTTGLTPATAAVTLPGTNLLSLAKANFQKLINSFTNSDFVGA 397

Query: 178 ARFYVTVG-----------------RNQLAAKE-VEIGRY------YLKRGEYVAAIPRF 213
           A+  +                      +L   E   + R+      + +R  + A    +
Sbjct: 398 AQLNLGWCLWLENKPAESRTAFSNALQRLPQSESQAVARFKLADIQFTERDFHGALTN-Y 456

Query: 214 QLVLANYSDAEHA-----EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
             V+  Y +         E ++ ++  A +A   + +A + ++ I + YP    +     
Sbjct: 457 IPVVEEYKNFPLVRSNLFERSLYQITRAALAETNITQASQAMAKILDLYPNTLLSDSSAL 516

Query: 269 LV 270
           LV
Sbjct: 517 LV 518



 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 73/229 (31%), Gaps = 55/229 (24%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG------ 108
             +   +E A  F K  N+ KA E     ++ +P +     ++L+    +Y+ G      
Sbjct: 32  TPESHAFEVAADFFKSHNWEKAEEKLADFAKKYPTSEFFADAVLLQGESRYALGRDSGVV 91

Query: 109 -----KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
                +   A  L ++Y              Y   ++  +            K      S
Sbjct: 92  ELLSTEMPHAGKLADQY-------------LYWTAVASYRS--------ANYKNAADSFS 130

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP-------RFQLV 216
           RIV  YTNS     A   +      L            K G +  AI         FQ +
Sbjct: 131 RIVTVYTNSAKRAEA---IFSQSQTLG-----------KMGAWPEAIKELRQPDGAFQQL 176

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER--YPQGYWA 263
           L +    E A + +  L EA +         E + +I ++   P+  W 
Sbjct: 177 LKSNPTNEFAIKGVLLLAEADLIQKDYQAVSEDLRIISQQKLTPEFKWR 225


>gi|153822653|ref|ZP_01975320.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|229510538|ref|ZP_04400018.1| TPR domain protein in aerotolerance operon [Vibrio cholerae B33]
 gi|126519810|gb|EAZ77033.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|229352983|gb|EEO17923.1| TPR domain protein in aerotolerance operon [Vibrio cholerae B33]
          Length = 622

 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 48/133 (36%), Gaps = 14/133 (10%)

Query: 4   VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63
           +L  A+C+F         F+L + F +++     W    S  +  D      +  E Y +
Sbjct: 309 LLIAALCLFRRGVI----FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMRMFNNEQYAQ 361

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLG 117
           A    ++  +  A  Y+ +          ++ +          A     AG+ Q+A  L 
Sbjct: 362 AAEAFRDPRWQGAARYYAK-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLY 420

Query: 118 EEYITQYPESKNV 130
           E  + Q P  ++ 
Sbjct: 421 EHVLKQEPNHQDA 433


>gi|254850437|ref|ZP_05239787.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|254846142|gb|EET24556.1| conserved hypothetical protein [Vibrio cholerae MO10]
          Length = 644

 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 48/133 (36%), Gaps = 14/133 (10%)

Query: 4   VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63
           +L  A+C+F         F+L + F +++     W    S  +  D      +  E Y +
Sbjct: 309 LLIAALCLFRRGVI----FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMRMFNNEQYAQ 361

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLG 117
           A    ++  +  A  Y+ +          ++ +          A     AG+ Q+A  L 
Sbjct: 362 AAEAFRDPRWQGAARYYAK-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLY 420

Query: 118 EEYITQYPESKNV 130
           E  + Q P  ++ 
Sbjct: 421 EHVLKQEPNHQDA 433


>gi|15600941|ref|NP_232571.1| hypothetical protein VCA0171 [Vibrio cholerae O1 biovar eltor str.
           N16961]
 gi|9657561|gb|AAF96084.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
          Length = 646

 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 48/133 (36%), Gaps = 14/133 (10%)

Query: 4   VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63
           +L  A+C+F         F+L + F +++     W    S  +  D      +  E Y +
Sbjct: 309 LLIAALCLFRRGVI----FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMRMFNNEQYAQ 361

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLG 117
           A    ++  +  A  Y+ +          ++ +          A     AG+ Q+A  L 
Sbjct: 362 AAEAFRDPRWQGAARYYAK-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLY 420

Query: 118 EEYITQYPESKNV 130
           E  + Q P  ++ 
Sbjct: 421 EHVLKQEPNHQDA 433


>gi|116622919|ref|YP_825075.1| sulfatase [Candidatus Solibacter usitatus Ellin6076]
 gi|116226081|gb|ABJ84790.1| sulfatase [Candidatus Solibacter usitatus Ellin6076]
          Length = 550

 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 37/113 (32%), Gaps = 8/113 (7%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
            +     +    Q++         D   +  +YE A + L  +   +A     +     P
Sbjct: 404 LLGSLGYIAPGPQTAASGSRPDPKDRMAEFRLYEDAQVLLYRRRLPEAIAALRKLVTQHP 463

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV-YYLVGMS 140
              +AR+             +Y +A     + +   P     DYV  Y +G++
Sbjct: 464 RNTLARR---DLGGAYLEQKQYARAREELAQVLLAAPN----DYVTLYQLGLA 509


>gi|56552553|ref|YP_163392.1| hypothetical protein ZMO1657 [Zymomonas mobilis subsp. mobilis ZM4]
 gi|56544127|gb|AAV90281.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
           ZM4]
          Length = 356

 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 38/89 (42%), Gaps = 7/89 (7%)

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
           P +  A +  L + +  ++  +Y +A ++ + +I++YP      Y   L+G +Y     D
Sbjct: 223 PNSDPAEQVYL-AGYKLWNDKRYPEAETVLKSFISKYPSHSRASYARNLLGRAYL----D 277

Query: 148 VPYDQRATKLMLQYMSRIVE--RYTNSPY 174
                +A +        I +  R  +S Y
Sbjct: 278 SGEPAQAAETFYSNYQSIPQGARAPDSLY 306



 Score = 40.1 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 39/123 (31%), Gaps = 12/123 (9%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
            +     +VY        ++ + +A          +P    A  +  +       +G+  
Sbjct: 223 PNSDPAEQVYLAGYKLWNDKRYPEAETVLKSFISKYPSHSRASYARNLLGRAYLDSGEPA 282

Query: 112 QAASLGEEYITQY---PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           QA    E + + Y   P+        Y +G S   +    P D        +  + +++ 
Sbjct: 283 QA---AETFYSNYQSIPQGARAPDSLYFLGQSLMALKPARPKD------ACKVYAELLDV 333

Query: 169 YTN 171
           Y N
Sbjct: 334 YGN 336


>gi|220932028|ref|YP_002508936.1| TPR repeat-containing protein [Halothermothrix orenii H 168]
 gi|219993338|gb|ACL69941.1| TPR repeat-containing protein [Halothermothrix orenii H 168]
          Length = 394

 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 72/205 (35%), Gaps = 39/205 (19%)

Query: 45  DVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAF 102
           +  LD     + +  +Y   A L++ ++++ KA +   +  +  P F  ++ K       
Sbjct: 198 EKALDMTESTQNRISIYSNLAELYMNDKDYEKAIKVLEESKKINPDFVAISTK----LGE 253

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
             Y +G Y+ A    E+ ++      +  Y  YY +G  +     +           + Y
Sbjct: 254 AYYLSGNYELAREEFEKVVSIN----DKSYKAYYYLGKIHEINHNE--------DKAIYY 301

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
             + ++      Y   A  Y+ +            G  Y+++ +   AI  +   +    
Sbjct: 302 YKQALKYNP--EY---ASAYIAL------------GDIYIRQDKPYLAISHYSTAIEKNP 344

Query: 222 DAEHAEEAMARLVEAYVALALMDEA 246
           +     ++   L   Y  L + D A
Sbjct: 345 N---YPDSHFHLAVTYYILEMEDAA 366


>gi|301095908|ref|XP_002897053.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262108482|gb|EEY66534.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 611

 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 60/182 (32%), Gaps = 20/182 (10%)

Query: 5   LGRAICIFEAWAYQLYKFALTIFFSIAVC----FLVGWERQSSRDVYLDSVTDVRY---Q 57
           L RA C+F    ++  +         A+C    FL+  +RQ S    LD    +     +
Sbjct: 110 LSRACCLFYLQNFEDAEHTALSSSRSALCNRLLFLLAHKRQHSEQTLLDRYQQLSRDSVE 169

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL-LMSAFVQYSAGKYQQAASL 116
            ++   A     + NF +A E + +       +     +L +  A   +  G    A  L
Sbjct: 170 DQL-AIAAASFTQNNFQEAAEIYKRLLASSKGSQEGGSALHVYLALCYFRLGYDDVALEL 228

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
              Y+       +  +   +      ++           +     +   V+R+ N P  +
Sbjct: 229 LAVYLV---GHPDSFFATNIKASCNYRLFN--------AREAKLILDDYVKRFPNHPSAQ 277

Query: 177 GA 178
            A
Sbjct: 278 EA 279


>gi|254225238|ref|ZP_04918851.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|125622337|gb|EAZ50658.1| conserved hypothetical protein [Vibrio cholerae V51]
          Length = 619

 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 48/133 (36%), Gaps = 14/133 (10%)

Query: 4   VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63
           +L  A+C+F         F+L + F +++     W    S  +  D      +  E Y +
Sbjct: 309 LLIAALCLFRRGVI----FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMRMFNNEQYAQ 361

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLG 117
           A    +   +  A  Y+ +          ++ +          A     AG+ Q+A  L 
Sbjct: 362 AAEAFRNPRWQGAARYYAK-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLY 420

Query: 118 EEYITQYPESKNV 130
           E+ + Q P  ++ 
Sbjct: 421 EQVLKQEPNHQDA 433


>gi|241762205|ref|ZP_04760287.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|241373252|gb|EER62871.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
          Length = 356

 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 38/89 (42%), Gaps = 7/89 (7%)

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
           P +  A +  L + +  ++  +Y +A ++ + +I++YP      Y   L+G +Y     D
Sbjct: 223 PNSDPAEQVYL-AGYKLWNDKRYPEAETVLKSFISKYPSHSRASYARNLLGRAYL----D 277

Query: 148 VPYDQRATKLMLQYMSRIVE--RYTNSPY 174
                +A +        I +  R  +S Y
Sbjct: 278 SGEPAQAAETFYSNYQSIPQGARAPDSLY 306



 Score = 40.1 bits (93), Expect = 0.33,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 39/123 (31%), Gaps = 12/123 (9%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
            +     +VY        ++ + +A          +P    A  +  +       +G+  
Sbjct: 223 PNSDPAEQVYLAGYKLWNDKRYPEAETVLKSFISKYPSHSRASYARNLLGRAYLDSGEPA 282

Query: 112 QAASLGEEYITQY---PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           QA    E + + Y   P+        Y +G S   +    P D        +  + +++ 
Sbjct: 283 QA---AETFYSNYQSIPQGARAPDSLYFLGQSLMALKPARPKD------ACKVYAELLDV 333

Query: 169 YTN 171
           Y N
Sbjct: 334 YGN 336


>gi|163814118|ref|ZP_02205510.1| hypothetical protein COPEUT_00271 [Coprococcus eutactus ATCC 27759]
 gi|158450567|gb|EDP27562.1| hypothetical protein COPEUT_00271 [Coprococcus eutactus ATCC 27759]
          Length = 245

 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 77/234 (32%), Gaps = 48/234 (20%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARK-SLLMSAFVQYSAGKYQ 111
           +  + E Y+K V + +  ++ +A   F +  + +  F+    +   L  A     + +Y 
Sbjct: 14  ISQKDEYYDKGVTYYESGSYQEAITSFKDALNENQLFSEKKDQNIKLYMADAYLKSAQYA 73

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS-------- 163
           +AA+  +E                   ++ +        D +     L   S        
Sbjct: 74  EAAATYKE-------------------LTDSSFSGSNVNDLKDLASALDDFSNGNYGGAL 114

Query: 164 ----RIVERYTN-SPYVKGARFYVTVGRNQLAAKEVEI-------------GRYYLKRGE 205
               +  + Y     Y+           N  A+ E  +             G YYL  G+
Sbjct: 115 DVLLKEADTYPELYMYIGTCYAVTDDSENMFASYEKYVQTFGFNSYVYAMYGSYYLSNGD 174

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
             +A+   +  L    D  + +E M   V  Y   +  D+A E+ S + E YP 
Sbjct: 175 MESALAYIKNGLEC-DDTVYRKELMLLQVAYYEKNSDFDQAYELASQLVETYPD 227


>gi|13473328|ref|NP_104895.1| hypothetical protein mll3886 [Mesorhizobium loti MAFF303099]
 gi|14024077|dbj|BAB50681.1| mll3886 [Mesorhizobium loti MAFF303099]
          Length = 370

 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 23/138 (16%), Positives = 45/138 (32%), Gaps = 22/138 (15%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
             S    + ++       E+Y  +  F+   ++  A + F      FP     R +   +
Sbjct: 230 GKSNGTIVAALPSTNDPEELYRNSYQFILSGDYGTAEQGFRDHISRFP-----RDAK--A 282

Query: 101 AFVQYSAGKYQQA----ASLGEEYI---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
           A   Y  G+            E ++     YP++K    +   +G+S       V   Q 
Sbjct: 283 ADAHYWLGESLLGQQKYRDAAEVFLAASKDYPKAKKAPDMLLKLGVSL------VGLKQH 336

Query: 154 ATKLMLQYMSRIVERYTN 171
                    S + +RY +
Sbjct: 337 DV--ACATFSEVGKRYPD 352



 Score = 37.0 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 38/132 (28%), Gaps = 29/132 (21%)

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
           +G Y  A     ++I+++P        +Y +G S           Q+  +   +      
Sbjct: 259 SGDYGTAEQGFRDHISRFPRDAKAADAHYWLGESL--------LGQQKYRDAAEVFLAAS 310

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
           + Y  +         + V    L   +V    +                V   Y D   A
Sbjct: 311 KDYPKAKKAPDMLLKLGVSLVGLKQHDVACATF--------------SEVGKRYPDISSA 356

Query: 227 -------EEAMA 231
                  E+A+A
Sbjct: 357 LKERVKQEKALA 368


>gi|17230575|ref|NP_487123.1| hypothetical protein all3083 [Nostoc sp. PCC 7120]
 gi|17132177|dbj|BAB74782.1| all3083 [Nostoc sp. PCC 7120]
          Length = 422

 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 6/84 (7%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             E Y + +   K+++++ A E F++  +  P+   A  + L      Y +G    A S 
Sbjct: 2   NNEFYNQGLEKAKQKDYAGAIEEFSRALKLAPY--FAE-AYLQRGLAYYDSGAILLAVSD 58

Query: 117 GEEYITQYPESKNVDYVYYLVGMS 140
             E I   PES      YY   ++
Sbjct: 59  YTEVIKINPESVE---AYYCRALA 79


>gi|260891961|ref|YP_003238058.1| Tetratricopeptide repeat protein [Ammonifex degensii KC4]
 gi|260864102|gb|ACX51208.1| Tetratricopeptide repeat protein [Ammonifex degensii KC4]
          Length = 192

 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 44/126 (34%), Gaps = 13/126 (10%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++ E      +E   ++A   + +  + +P       + L  A +  +  KY  A    E
Sbjct: 76  KLLELGAKAREEGKLAEATRTYEEVLKLYPDN---TNARLSLAEIYLAEEKYDAAYQQVE 132

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
             + + P  +      +  G+      +D P         ++ + + ++   ++P    A
Sbjct: 133 AILQKNPNHQL---ALFYRGLILGYGKKDYP-------AAVKDLEKFLKLAPDAPEASQA 182

Query: 179 RFYVTV 184
           R  +  
Sbjct: 183 RILIEE 188


>gi|209527435|ref|ZP_03275940.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
 gi|209492108|gb|EDZ92458.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
          Length = 520

 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 78/213 (36%), Gaps = 43/213 (20%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARK-SLLMSAFVQYSAGKYQQAASLG 117
           Y +A        + +A   +++ ++  P F      + +LLMS       G++++A    
Sbjct: 309 YGRANALSSLSQYDEAIASYDRATQLQPNFHPAWRDRGALLMS------LGRHEEALQAF 362

Query: 118 EEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
           +  +   P+    DY ++YL G      + D P          +  +R++    +     
Sbjct: 363 DRLLQIQPD----DYGIWYLRGNILMNHLDDYP-------EAARSYARVINIKPDFTPAF 411

Query: 177 GARFYVTVGRNQLAAKEVEIG-------RYYLKRGEYV------AAIPRFQLVLANYS-- 221
            A+        +L      I        +   +R  +V       AI R+   L  Y+  
Sbjct: 412 TAKAQALF---RLGDYGEAIAWLDESLHQNSHQREAWVLRGQIFMAIQRYAQALNAYNRA 468

Query: 222 ---DAEHAEEAMARLVEAYVALALMDEAREVVS 251
              D+ H++  + + + AY+ L    EA++   
Sbjct: 469 VNLDSNHSQSWLGKAI-AYLRLNRDQEAKDAAQ 500


>gi|296132539|ref|YP_003639786.1| TPR repeat-containing protein [Thermincola sp. JR]
 gi|296031117|gb|ADG81885.1| TPR repeat-containing protein [Thermincola potens JR]
          Length = 217

 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 59/176 (33%), Gaps = 31/176 (17%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +L+   +  Y  G YQQA    EE +     +      ++ + +SY ++           
Sbjct: 67  ALVELGWRYYRKGDYQQAVKNLEEAVRINDSNPA---AHFNLALSYKEI--------GLL 115

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           +   +  +++++   +                        +G+ Y ++  Y  AI   + 
Sbjct: 116 EKAEEEFNKVLQISPDHKLAP-----------------FYMGKMYFEQNRYDDAI---KQ 155

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           ++        + +A   L +AY A    +EA        E  P    A+     ++
Sbjct: 156 LVKATELDPASADASYLLGQAYQAKGYNEEALAAYERALELVPGHSEAKEAYYKLQ 211



 Score = 40.9 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 8/72 (11%), Positives = 24/72 (33%), Gaps = 3/72 (4%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
             ++ ++  +  A +   + +   P +     +  +      + G  ++A +  E  +  
Sbjct: 140 GKMYFEQNRYDDAIKQLVKATELDPASA---DASYLLGQAYQAKGYNEEALAAYERALEL 196

Query: 124 YPESKNVDYVYY 135
            P        YY
Sbjct: 197 VPGHSEAKEAYY 208


>gi|154707419|ref|YP_001424860.1| tetratricopeptide repeat family protein [Coxiella burnetii Dugway
           5J108-111]
 gi|154356705|gb|ABS78167.1| tetratricopeptide repeat family protein [Coxiella burnetii Dugway
           5J108-111]
          Length = 561

 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 49/182 (26%), Gaps = 49/182 (26%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A +++   +FSKA  Y+ +     P       +            ++Q+A       +  
Sbjct: 179 AHVYMYLGDFSKAITYYEKRLALEPENA---DAQYDCGLAHLKDNQFQKAIDHFTNALLL 235

Query: 124 YPESKNVDY----VYYLVG------MSYAQMIRDVPYD------------QRATKLMLQY 161
            PE  +  Y     Y   G      + Y + +   P              Q   +  + Y
Sbjct: 236 NPEHPDCHYSLATAYLQRGDHKEALLHYLRQLEKKPQIECYYNVGVLHMYQERHREAIDY 295

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
             + +    N                      + I   YLK       I + +  + +Y 
Sbjct: 296 FKQALTLDPNYREA-----------------HLNIAAVYLK-------INQIKQAIEHYE 331

Query: 222 DA 223
             
Sbjct: 332 ST 333


>gi|29839839|ref|NP_828945.1| TPR domain-containing protein [Chlamydophila caviae GPIC]
 gi|29834186|gb|AAP04823.1| TPR domain protein [Chlamydophila caviae GPIC]
          Length = 318

 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 81/238 (34%), Gaps = 39/238 (16%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
           S  +            +   +   +L++Q++ KA   F   +  FP   +  +++ ++  
Sbjct: 29  SGKLSPQKFVPKYSPEQYLSEGKNYLEQQSYRKALLCFGMITHHFPKDPLYTEAVYLTGV 88

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDY------VYYLVGMSYAQ-------MIRDVP 149
             +  G+   A      Y+       + DY      + Y +  S+AQ       ++   P
Sbjct: 89  CYFKNGQPDLAEKAFAAYMQL----PDADYSEELFLMKYSIAQSFAQGKRKRLFLLEGFP 144

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
               A    L+    I+  + +    K         +  L    + I        ++  A
Sbjct: 145 KLVNADADALRIYDEILTAFPD----KDLGAQALYLKGDL----LVI------TKDFSEA 190

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD--------EAREVVSLIQERYPQ 259
           I  F+ +   +S    + +A  RL E Y+  A  +         A+     I++++P 
Sbjct: 191 IKIFKKLTLQFSAHALSPKAFVRLSEIYLMQAQKEPHNVQYLNLAKINEEAIKKQHPN 248



 Score = 43.2 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 56/152 (36%)

Query: 75  KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
            A   +++    FP   +  ++L +   +      + +A  + ++   Q+         +
Sbjct: 152 DALRIYDEILTAFPDKDLGAQALYLKGDLLVITKDFSEAIKIFKKLTLQFSAHALSPKAF 211

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
             +   Y    +  P++ +   L       I +++ N P  +     V     + A+   
Sbjct: 212 VRLSEIYLMQAQKEPHNVQYLNLAKINEEAIKKQHPNHPLTEVVSANVRSMHERYASGLY 271

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
             GR+Y K+ ++ AA   +   + NY ++   
Sbjct: 272 ATGRFYEKKKKHHAASIYYTAAIDNYPESSLV 303


>gi|325298820|ref|YP_004258737.1| hypothetical protein Bacsa_1701 [Bacteroides salanitronis DSM
           18170]
 gi|324318373|gb|ADY36264.1| hypothetical protein Bacsa_1701 [Bacteroides salanitronis DSM
           18170]
          Length = 724

 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 63/200 (31%), Gaps = 47/200 (23%)

Query: 44  RDVYLDSVTDVRYQREVYEK-----AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
            +   +   D+R + + Y +     A   L    ++   E        +P     ++   
Sbjct: 533 SEWEHEDFIDLRTEEDYYNECKEIYAKKELSNHAYNNYIEK-------YPEGKYLKEVQS 585

Query: 99  ---MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
                 +  Y   KY++  S  ++YI +YP        +YL   S    + D+ + Q   
Sbjct: 586 FKDTLKYESYLYEKYKETISSCKDYIKRYPNG------WYLS--SIKNRLDDLIFKQ--- 634

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
                 +   + +Y N   V  A   +          ++                 R + 
Sbjct: 635 YKSAHNLEEYIVQYPNGRNVSKADDLLFE------QYKLT---------------NRLKD 673

Query: 216 VLANYSDAEHAEEAMARLVE 235
            LA++    +A EA   L +
Sbjct: 674 YLAHFPKGRNAHEAENLLKK 693


>gi|110833382|ref|YP_692241.1| TPR domain-containing protein [Alcanivorax borkumensis SK2]
 gi|110646493|emb|CAL15969.1| TPR domain protein [Alcanivorax borkumensis SK2]
          Length = 532

 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 49/141 (34%), Gaps = 21/141 (14%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK--YQQAASLG 117
           +  +A     + N     E   Q +  +P      ++ L  A   +   +   Q A    
Sbjct: 116 LVNQARGLGAQGNLQL-VEALAQLTHRYP-----DQAPLWYARALWLEHEEQPQPALEAT 169

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           E  +   P  ++      L      +       DQ   K  L+++ ++V +Y  +   + 
Sbjct: 170 ERTLKLMPRHED---ALLLKAQLLYE-----TGDQ---KKALRHLKKLVRKYPQAQRPRI 218

Query: 178 ARFYVTVGRNQL--AAKEVEI 196
           A   + +   +L  A K++ I
Sbjct: 219 AYVRMLLTSGELEDAEKQLAI 239


>gi|66805627|ref|XP_636535.1| p67-like superoxide-generating NADPH oxidase [Dictyostelium
           discoideum AX4]
 gi|75013449|sp|Q867T7|NCFA_DICDI RecName: Full=NADPH oxidase activator; Short=NOX activator;
           AltName: Full=p67-phox-like factor
 gi|29028302|gb|AAO62420.1| p67-like superoxide-generating NADPH oxidase [Dictyostelium
           discoideum]
 gi|29367189|gb|AAO72634.1| p67-like superoxide-generating NADPH oxidase [Dictyostelium
           discoideum]
 gi|60464893|gb|EAL63008.1| p67-like superoxide-generating NADPH oxidase [Dictyostelium
           discoideum AX4]
          Length = 604

 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQ-CS-RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           Y   V+++K  NF  A EYFN+      +  +        M A   +  G+   A    +
Sbjct: 40  YNIGVMYIKSNNFRNAIEYFNRSVEQDKYLASSY-----YMRAIAHHMNGELNHAIVDYD 94

Query: 119 EYITQYPESKNVDY 132
           E I++    + +DY
Sbjct: 95  ETISKLRGHEYIDY 108


>gi|254475991|ref|ZP_05089377.1| tetratricopeptide TPR_2 [Ruegeria sp. R11]
 gi|214030234|gb|EEB71069.1| tetratricopeptide TPR_2 [Ruegeria sp. R11]
          Length = 189

 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 45/136 (33%), Gaps = 19/136 (13%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           + ++ +  L+      A E+    +   P    A K     A   +S G +  A +  E 
Sbjct: 72  LLQRGLDALERGEPQMAVEHLTALTDHAP--DFA-KGWYERARAYFSVGLFGPAVADLER 128

Query: 120 YITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            +T  P+    DY   + +G +  +   D            +   R    + +   +  A
Sbjct: 129 ALTLNPD----DYNAIFALG-TMFEQFNDPDR-------AYEAYQRAQAIHPHHEQITSA 176

Query: 179 RFYVTVGRNQLAAKEV 194
                  ++ +  KE+
Sbjct: 177 LER---LKDTVEGKEL 189


>gi|332975199|gb|EGK12099.1| hypothetical protein HMPREF0476_0098 [Kingella kingae ATCC 23330]
          Length = 231

 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 41/118 (34%), Gaps = 10/118 (8%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            +A  + K+  + K  +              A++S+++        G  Q    +G+ + 
Sbjct: 112 SQAQTWYKQGQYQKVLDLLRLHDSGGNGDANAQQSMILLLQSNQKLGYCQSVIQIGQRFA 171

Query: 122 TQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           T + +        Y VG    Q   RD+           +    +V RY N+P  + A
Sbjct: 172 TLFAQHDFAPEALYAVGQCQWQIQQRDI---------AKETWRNLVLRYPNTPAARRA 220


>gi|144897901|emb|CAM74765.1| protein conserved in bacteria [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 323

 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 42/130 (32%), Gaps = 10/130 (7%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
            +   + S    +  + +Y+ A   L+  +++ A + F           +A  +      
Sbjct: 184 KKPAPVVSSAAPKDAQGLYDMAYDALQGGDYATAEKGFQDFLAQHGSHQLAGNAQYWLGD 243

Query: 103 VQYSAGKY-QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           + Y    +   A +  E Y  ++P+      + Y  G ++ QM +         K     
Sbjct: 244 IAYVRKDFNTSAVTFLEGY-KKFPKHSKAADMIYKAGSAFGQMGKK--------KEACTA 294

Query: 162 MSRIVERYTN 171
            + +      
Sbjct: 295 FAILFNEQPK 304


>gi|295688125|ref|YP_003591818.1| tol-pal system protein YbgF [Caulobacter segnis ATCC 21756]
 gi|295430028|gb|ADG09200.1| tol-pal system protein YbgF [Caulobacter segnis ATCC 21756]
          Length = 289

 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 39/120 (32%), Gaps = 15/120 (12%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            +  R +  D        Q  S  V  Y ++     AR+++              G    
Sbjct: 168 FKQARQLLLD-GDYANAEQAFSAYVTNYPDNAKTPEARYWL--------------GETLF 212

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            R  Y  A   +   +  +       +A  +L  + VAL    EA   +  + +RYP+  
Sbjct: 213 VREAYTDAAAAYIGAIRGWPQTTWGPDATLKLARSMVALKKTAEACRTLDELSKRYPKAS 272


>gi|115380309|ref|ZP_01467319.1| TPR repeat, putative [Stigmatella aurantiaca DW4/3-1]
 gi|115362685|gb|EAU61910.1| TPR repeat, putative [Stigmatella aurantiaca DW4/3-1]
          Length = 197

 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 43/131 (32%), Gaps = 8/131 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           +E+     +  +     E   +     P    A  +         + GK+ QA  L   +
Sbjct: 36  FERGKAAFRRNDMKGTVEDLARFMAMNPSEADALDASFFLGAAYNNLGKHDQAVPLLARF 95

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +     SK  DY   L+  SY +  +        T+  L  +   +  Y  + Y+   R 
Sbjct: 96  VDGDKRSKTRDYAMVLLAQSYQETNQ--------TEKALATVRDAIATYPATQYLGAMRA 147

Query: 181 YVTVGRNQLAA 191
            +   + QL  
Sbjct: 148 RLNSAKRQLGG 158


>gi|88812565|ref|ZP_01127813.1| TPR repeat protein [Nitrococcus mobilis Nb-231]
 gi|88790159|gb|EAR21278.1| TPR repeat protein [Nitrococcus mobilis Nb-231]
          Length = 918

 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 14/110 (12%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           +A + L E     A        +  P +    ++  +  F+++  G++  AA   ++ + 
Sbjct: 233 RAQIELIENQLDAAEADIEALRKLAPTS---VQANHLLGFLRFRQGRFNDAALAYQDALR 289

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
               + + D     +G++           Q   +  +Q  SR +++Y +S
Sbjct: 290 ---ANPDFDPAILWLGLTNYA--------QHNYEQAIQRFSRFLQKYPDS 328


>gi|308183384|ref|YP_003927511.1| paralysed flagella protein [Helicobacter pylori PeCan4]
 gi|308065569|gb|ADO07461.1| paralysed flagella protein [Helicobacter pylori PeCan4]
          Length = 803

 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 49/137 (35%), Gaps = 9/137 (6%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             +T   Y    Y +A   +  Q +  A    ++  +++P     +   L+        G
Sbjct: 188 PLLTTKGYDLNAYLEAKKQMDSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIALGQLG 247

Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            K      +G ++I  YP    +  V Y V  +  +            K  ++Y  RI+ 
Sbjct: 248 IKKSLLIDIGTKWIKNYPTDPGIPEVLYYVAKALDEN--------NNYKQAMRYYKRILL 299

Query: 168 RYTNSPYVKGARFYVTV 184
            Y NS Y   A+  + +
Sbjct: 300 EYKNSRYAPLAQMRLAI 316



 Score = 42.4 bits (99), Expect = 0.069,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 31/99 (31%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
             + RA   +    ++   + L I     +                +  TD      +Y 
Sbjct: 217 RTISRAFKNYPQTIFKKDLYLLEIIALGQLGIKKSLLIDIGTKWIKNYPTDPGIPEVLYY 276

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
            A    +  N+ +A  Y+ +   ++  +  A  + +  A
Sbjct: 277 VAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRLA 315


>gi|149181840|ref|ZP_01860330.1| YvcD [Bacillus sp. SG-1]
 gi|148850479|gb|EDL64639.1| YvcD [Bacillus sp. SG-1]
          Length = 504

 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 7/71 (9%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +KA   L+  NF KA +   Q  +DFP  ++          A   +  GK ++AA+  EE
Sbjct: 158 DKARNLLESGNFQKAVDLLEQVIKDFPEYWSAYN-----NLALAYFYLGKTEKAAATLEE 212

Query: 120 YITQYPESKNV 130
            + + P + + 
Sbjct: 213 VMEKNPGNLHA 223


>gi|302038038|ref|YP_003798360.1| hypothetical protein NIDE2729 [Candidatus Nitrospira defluvii]
 gi|300606102|emb|CBK42435.1| protein of unknown function [Candidatus Nitrospira defluvii]
          Length = 489

 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 26/87 (29%), Gaps = 1/87 (1%)

Query: 32  VCFLVGWERQSSRDVYLD-SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
           V    G    S+  V        V  +  ++ +A     +  +S A   + +    +P +
Sbjct: 4   VAGCAGSPPTSTPAVVPPTETPTVAAETSLWYQASTAFSDGRYSAAIHLYERYLTTYPKS 63

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLG 117
             A ++           G+   A    
Sbjct: 64  RRALEAHWDLGQAYEQMGEVTAAIKEY 90



 Score = 40.5 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 13/103 (12%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           A  SL   A   +S G+Y  A  L E Y+T YP+S+     ++ +G +Y QM        
Sbjct: 29  AETSLWYQASTAFSDGRYSAAIHLYERYLTTYPKSRRALEAHWDLGQAYEQM-------- 80

Query: 153 RATKLMLQYMSRIV-----ERYTNSPYVKGARFYVTVGRNQLA 190
                 ++    +           + Y + A+  +   RNQ A
Sbjct: 81  GEVTAAIKEYRTLTGPEGASLSAQNSYAERAQHRIDALRNQPA 123



 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 22/50 (44%)

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           G Y AAI  ++  L  Y  +  A EA   L +AY  +  +  A +    +
Sbjct: 44  GRYSAAIHLYERYLTTYPKSRRALEAHWDLGQAYEQMGEVTAAIKEYRTL 93


>gi|308274104|emb|CBX30703.1| hypothetical protein N47_E42150 [uncultured Desulfobacterium sp.]
          Length = 355

 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 27/208 (12%), Positives = 65/208 (31%), Gaps = 33/208 (15%)

Query: 6   GRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE------RQSSRDVYLDSVTDVRYQRE 59
           G+A  I      ++ +F L     I++      +      +  +      S        E
Sbjct: 15  GKASRIVHGEGEKIVRFFLIALILISLTGCASVQEDWRITKTQNSKSAYSSFLSNHPDSE 74

Query: 60  VYEKAVLFLKEQNFSKA-----YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
              +A + + E  + KA        + +  +  P      +++     +++ + K     
Sbjct: 75  YSAEARIKIDEFVWLKAKQENRVFEYEKFIKYNPNNIFVSEAIKNIKILEWESAKKDDTI 134

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK-LMLQYMS---------R 164
              E+++ +YP      Y          +    +   ++ T+    Q +S         +
Sbjct: 135 ESYEKFLKKYPAGS---YA--------TKATDSIARIKKETELKAFQSVSNSKIRAKLIQ 183

Query: 165 IVERYTNSPYVKGARFYV-TVGRNQLAA 191
            +  Y  S Y +  +  +     N LA 
Sbjct: 184 FLNDYPKSEYREKIQERLSLFSSNTLAK 211


>gi|15677298|ref|NP_274452.1| hypothetical protein NMB1440 [Neisseria meningitidis MC58]
 gi|7226681|gb|AAF41801.1| hypothetical protein NMB1440 [Neisseria meningitidis MC58]
 gi|316984566|gb|EFV63531.1| periplasmic protein [Neisseria meningitidis H44/76]
 gi|325134580|gb|EGC57224.1| putative lipoprotein [Neisseria meningitidis M13399]
 gi|325140616|gb|EGC63136.1| putative lipoprotein [Neisseria meningitidis CU385]
 gi|325144741|gb|EGC67036.1| putative lipoprotein [Neisseria meningitidis M01-240013]
 gi|325199945|gb|ADY95400.1| putative lipoprotein [Neisseria meningitidis H44/76]
 gi|325205807|gb|ADZ01260.1| putative lipoprotein [Neisseria meningitidis M04-240196]
          Length = 237

 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 42/125 (33%), Gaps = 11/125 (8%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S   V   + +Y +A+   K   FS A               +A++S+ +    +   G 
Sbjct: 111 SAHTVETAQNLYNQALKHYKSGKFSAAASLLKGADGGD-GGSIAQRSMYLLLQSRARMGN 169

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVER 168
            +    +G  Y  ++ +S       + +G    +   +D+                +++ 
Sbjct: 170 CESVIEIGGRYANRFKDSPTAPEAMFKIGECQYRLQQKDIAR---------ATWRSLIQT 220

Query: 169 YTNSP 173
           Y  SP
Sbjct: 221 YPGSP 225



 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 20/52 (38%), Gaps = 7/52 (13%)

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             RF+       D+  A EAM ++ E    L   D AR     + + YP   
Sbjct: 181 ANRFK-------DSPTAPEAMFKIGECQYRLQQKDIARATWRSLIQTYPGSP 225


>gi|77360807|ref|YP_340382.1| prenylyltransferase domain-containing protein [Pseudoalteromonas
           haloplanktis TAC125]
 gi|76875718|emb|CAI86939.1| putative periplasmic protein contains a protein prenylyltransferase
           domain [Pseudoalteromonas haloplanktis TAC125]
          Length = 248

 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 43/130 (33%), Gaps = 21/130 (16%)

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
           Y   ++     +            +      +  Y NS Y   A +++            
Sbjct: 134 YERAVALIMKDKRYD-------QAIPEFQTFLTTYPNSVYASNAHYWLGQLLTI------ 180

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
                   +     A   F++V+  + ++    +AM +L        L  EA+++++ + 
Sbjct: 181 --------KNNPAKATEHFKVVVNEFPNSNKRPDAMLKLGTLLQEQNLAAEAQKILNDLI 232

Query: 255 ERYPQGYWAR 264
            +YP    A+
Sbjct: 233 NQYPSTTAAK 242



 Score = 44.7 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 48/133 (36%), Gaps = 19/133 (14%)

Query: 56  YQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKS-----LLMSAFVQYSAGK 109
            + E YE+AV   +K++ + +A   F      +P +  A  +      L++         
Sbjct: 129 SENEAYERAVALIMKDKRYDQAIPEFQTFLTTYPNSVYASNAHYWLGQLLTI-----KNN 183

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
             +A    +  + ++P S         +G         +  +Q       + ++ ++ +Y
Sbjct: 184 PAKATEHFKVVVNEFPNSNKRPDAMLKLG--------TLLQEQNLAAEAQKILNDLINQY 235

Query: 170 TNSPYVKGARFYV 182
            ++   K A   +
Sbjct: 236 PSTTAAKLATKRL 248


>gi|291231417|ref|XP_002735665.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
          Length = 474

 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 76/212 (35%), Gaps = 28/212 (13%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D+++D  Y   VY      +KE  ++ A +  +   ++ P +   R +L +  +  +   
Sbjct: 5   DNISDGEYSSTVY----TMIKEGKYTDAIQILSSEIQNHPRS---RAALSLLGYCYFYMQ 57

Query: 109 KYQQAASLGEEYITQYPESKNVDY-----------VYYLVGMSYAQMIRDVPYDQRATKL 157
            +  AA   E+ +  +P  +N DY             Y   M     I +  Y+ + TK+
Sbjct: 58  DFVNAAECYEQLVQLHP--ENDDYKIYHAQSLYKACMYQEAMKATSQIENSSYEAKITKV 115

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
                     RY     +  A+  V    +  A  EV +G    K G Y  A  +F   +
Sbjct: 116 QAAI------RYGE-EDLPAAKSLVEQCPSDDADTEVNMGCLLFKEGRYEQACHKFTTAM 168

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
                 +     + + V +Y  LA    A   
Sbjct: 169 Q-ILGYKPVLGILHKAVGSYFDLAADVLAENT 199


>gi|268326190|emb|CBH39778.1| hypothetical secreted protein, containing tetratricopeptide repeats
           [uncultured archaeon]
          Length = 435

 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 15/120 (12%), Positives = 35/120 (29%), Gaps = 8/120 (6%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
            +++  ++        N+  A   FN+     P                 + G    A S
Sbjct: 28  EEQQYIDQGKAEYNRGNYDAAIYLFNKAVDLNPDNEYLYN---DLGLCYVALGDMDLAIS 84

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
              + I     + +    YY  G++Y         D    K  +   ++ ++   ++   
Sbjct: 85  EFSKAIEL---NSDCVEAYYNRGLAYFGQ--GGYKDTEPFKNAISDFTKTIKLEPDNVDA 139


>gi|255280318|ref|ZP_05344873.1| putative tetratricopeptide repeat-containing domain protein
           [Bryantella formatexigens DSM 14469]
 gi|255269409|gb|EET62614.1| putative tetratricopeptide repeat-containing domain protein
           [Bryantella formatexigens DSM 14469]
          Length = 318

 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 91/245 (37%), Gaps = 34/245 (13%)

Query: 26  IFFSIAVC-FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC- 83
           +   +++C  L G   +   +V L             ++ + ++++ ++  A   F    
Sbjct: 8   LAAVLSMCMLLAGCRDKGPSEVELAR-----------DEGISYMEQADYQNAITAFENAY 56

Query: 84  ---SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
                  P         L  A  Q+  G ++         +     ++NVD  YY+ G +
Sbjct: 57  SLCDEKMPETK--TDISLYEAACQFKMGDFEGVKDTCSRILEL---AENVD-AYYMRGAA 110

Query: 141 YAQM----IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL--AAKEV 194
           + ++    +    +D  A+ L  +     ++ Y        +       +  L    +E+
Sbjct: 111 FLKLGEAELAKADFD-AASLLAPEDYGLFLDIYKQYEEQNQSAVGDEYLQKALNIPGEEM 169

Query: 195 EIGRYYLKRG--EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           E   YY K     Y+    + Q +LA  ++A+H +EAM  + E Y+AL     AR V   
Sbjct: 170 E--DYYQKGSIYFYLGEYTKAQEMLAKPAEAKH-KEAMMLMGEVYLALGDSVHARNVYQQ 226

Query: 253 IQERY 257
             E Y
Sbjct: 227 YMEEY 231


>gi|85714375|ref|ZP_01045363.1| TPR repeat protein [Nitrobacter sp. Nb-311A]
 gi|85698822|gb|EAQ36691.1| TPR repeat protein [Nitrobacter sp. Nb-311A]
          Length = 307

 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 29/129 (22%), Gaps = 22/129 (17%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
                        Y  A      +  +YP         Y +G S  Q  +         +
Sbjct: 186 EFDLGIGYMQRKDYALAEETMRNFTQKYPSDTLTGDAQYWLGESLFQRQK--------YR 237

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              +    +  +Y +S     A   +      L  KE              AA      V
Sbjct: 238 EAAEVFLGVTTKYDSSAKAADALLRLGQSLAALKEKE--------------AACAALGEV 283

Query: 217 LANYSDAEH 225
              Y  A  
Sbjct: 284 TRKYPRASA 292



 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 39/105 (37%), Gaps = 14/105 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
           L  + M    ++Y +      A++++                   +R +Y  A   F  V
Sbjct: 201 LAEETMRNFTQKYPSDTLTGDAQYWLGESL--------------FQRQKYREAAEVFLGV 246

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
              Y  +  A +A+ RL ++  AL   + A   +  +  +YP+  
Sbjct: 247 TTKYDSSAKAADALLRLGQSLAALKEKEAACAALGEVTRKYPRAS 291



 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 16/126 (12%), Positives = 47/126 (37%), Gaps = 14/126 (11%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           L ++      R+ ++  + +++ ++++ A E     ++ +P   +   +        +  
Sbjct: 174 LTTLPPSATPRDEFDLGIGYMQRKDYALAEETMRNFTQKYPSDTLTGDAQYWLGESLFQR 233

Query: 108 GKYQQAASLGEEYI---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
            KY++A    E ++   T+Y  S         +G S A +        +  +     +  
Sbjct: 234 QKYREA---AEVFLGVTTKYDSSAKAADALLRLGQSLAAL--------KEKEAACAALGE 282

Query: 165 IVERYT 170
           +  +Y 
Sbjct: 283 VTRKYP 288


>gi|301058980|ref|ZP_07199949.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
 gi|300446976|gb|EFK10772.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
          Length = 824

 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 55/191 (28%), Gaps = 47/191 (24%)

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
           ++     +     F+ +  G++ +A S+  + I   P    +            Q +  V
Sbjct: 476 YSPFTVSAYENLGFIHFEMGQFHEAVSMYRKAIRIKPGKAEL-----------YQDLGTV 524

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA--AKEVEIGRYYLKRG-- 204
                     +   SR ++   N         ++ + R   A    E  I  +   R   
Sbjct: 525 FLMHGQLDNAVSQFSRALKIRPNF-----VAAHLGLARAMGAKGRNEEAIAHF---REVL 576

Query: 205 ----EYVAAIPRFQLVLANYSDAEHA--EEA------------------MARLVEAYVAL 240
                 + A      V A Y DA+     EA                  +  L  AY   
Sbjct: 577 KINPGNLEAANDLAWVFATYPDAKFRNGPEAVRLAKMVCEATEYKLPLPLDTLAAAYAES 636

Query: 241 ALMDEAREVVS 251
            L D+A+E   
Sbjct: 637 GLFDKAQETAK 647


>gi|258626846|ref|ZP_05721653.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|262165946|ref|ZP_06033683.1| TPR repeat-containing protein [Vibrio mimicus VM223]
 gi|258580893|gb|EEW05835.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|262025662|gb|EEY44330.1| TPR repeat-containing protein [Vibrio mimicus VM223]
          Length = 253

 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 20/143 (13%), Positives = 56/143 (39%), Gaps = 14/143 (9%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
            S+ +    + +    ++  Y+ AV   LK+++++ A   F +   D+P +  +  S   
Sbjct: 119 SSNDEAAQGTFSSDANEQAAYQNAVDLILKKRDYAGAIAAFKKFQTDYPNSTFSANSHYW 178

Query: 100 SAFVQYSAGKYQQAASLGEEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
              + ++  + ++A    + +I    + +S         +G        D+       + 
Sbjct: 179 LGQLYFAKKEDKEA---AKSFIAVVSHQDSNKRADALVKLG--------DIAKRNNNAEQ 227

Query: 158 MLQYMSRIVERYTNSPYVKGARF 180
             ++  + ++ Y +S   K A+ 
Sbjct: 228 ARKFYQQAIDEYPDSASAKVAKE 250



 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 45/130 (34%), Gaps = 15/130 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            Q   D+   +R     +    +    Y NS +               A     +G+ Y 
Sbjct: 139 YQNAVDLILKKRDYAGAIAAFKKFQTDYPNSTFS--------------ANSHYWLGQLYF 184

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + E   A   F  V+++  D+    +A+ +L +        ++AR+      + YP   
Sbjct: 185 AKKEDKEAAKSFIAVVSH-QDSNKRADALVKLGDIAKRNNNAEQARKFYQQAIDEYPDSA 243

Query: 262 WARYVETLVK 271
            A+  +  +K
Sbjct: 244 SAKVAKESLK 253


>gi|254410505|ref|ZP_05024284.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
 gi|196182711|gb|EDX77696.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
          Length = 323

 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 35/103 (33%), Gaps = 14/103 (13%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            +A   L++  F +A   FN+     P    A +      FV       Q A +   + +
Sbjct: 209 NRANARLEQGKFKEAIADFNRAIAVNP--NYA-QGYSNRGFVHLQQNDLQTALADLNQAL 265

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
              P   N    YY  G+++ Q+  +        +  +    +
Sbjct: 266 EINP---NYAQAYYHRGLTHVQLSNE--------EEAIADFQK 297


>gi|182414769|ref|YP_001819835.1| TPR repeat-containing protein [Opitutus terrae PB90-1]
 gi|177841983|gb|ACB76235.1| Tetratricopeptide TPR_2 repeat protein [Opitutus terrae PB90-1]
          Length = 1104

 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 32/233 (13%), Positives = 70/233 (30%), Gaps = 41/233 (17%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           A+ I    A         +SS     + +       ++  +    L+  + + A + + +
Sbjct: 11  AVLILVIAAALLWFSPASRSSHATSAEFM-------QLMTRGNGLLENGDAAGAIDVYTR 63

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
                P +  +    L  A     A +   AA+   + +      +N    YYL+G +  
Sbjct: 64  AL---PLSPQSTDVRLNLANAYLLAERPMDAAAACRQVLDL---DRNNAAAYYLLGCALL 117

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
           +  +             Q   +I             +  +       A +E+        
Sbjct: 118 RQNQ-----PEPAAEAFQQSWKIEPGIP----ALDFQMGM-------AQREL-------- 153

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
            G    AI  F+ V+           A  +L + Y  +   ++A   +   Q+
Sbjct: 154 -GHLPDAISLFESVVRAEP---AHPSAHYQLSQLYRRVGRAEDATRELQQHQQ 202


>gi|311694763|gb|ADP97636.1| tetratricopeptide TPR_2 repeat protein [marine bacterium HP15]
          Length = 923

 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 28/69 (40%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           VY +A L +      +A  +F +     P + VA ++   +A     A  +  A    + 
Sbjct: 581 VYRQAELAVSSGRLGEAVGHFRRVDSVLPGSDVAIRARYDAANTLLKASDWGAAVGDLQS 640

Query: 120 YITQYPESK 128
           +   +P+ +
Sbjct: 641 FRADFPQHE 649


>gi|322420213|ref|YP_004199436.1| Sporulation domain-containing protein [Geobacter sp. M18]
 gi|320126600|gb|ADW14160.1| Sporulation domain-containing protein [Geobacter sp. M18]
          Length = 506

 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 27/71 (38%), Gaps = 7/71 (9%)

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           A    +   YY        A    + +L  +      EE +  L ++Y A +  ++A   
Sbjct: 35  ARNHYQESNYYF-------ASTWLERILKKFPATPQREEVLMMLAKSYAATSRDEKAIRT 87

Query: 250 VSLIQERYPQG 260
           +  + + +P+ 
Sbjct: 88  LKTLLKDFPKS 98



 Score = 39.3 bits (91), Expect = 0.63,   Method: Composition-based stats.
 Identities = 14/109 (12%), Positives = 39/109 (35%), Gaps = 11/109 (10%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +      +   +  C ++     +  D           +  ++ +A    +E N+  A  
Sbjct: 1   MNTVRTLLVAVVLACLIIPSASFAESD-----------EASMFAQARNHYQESNYYFAST 49

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
           +  +  + FP      + L+M A    +  + ++A    +  +  +P+S
Sbjct: 50  WLERILKKFPATPQREEVLMMLAKSYAATSRDEKAIRTLKTLLKDFPKS 98



 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 32/77 (41%), Gaps = 8/77 (10%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           S+   A   Y    Y  A++  E  + ++P +   + V  ++  SYA   RD        
Sbjct: 30  SMFAQARNHYQESNYYFASTWLERILKKFPATPQREEVLMMLAKSYAATSRD-------- 81

Query: 156 KLMLQYMSRIVERYTNS 172
           +  ++ +  +++ +  S
Sbjct: 82  EKAIRTLKTLLKDFPKS 98


>gi|194098694|ref|YP_002001756.1| hypothetical protein NGK_1131 [Neisseria gonorrhoeae NCCP11945]
 gi|239998999|ref|ZP_04718923.1| hypothetical protein Ngon3_05900 [Neisseria gonorrhoeae 35/02]
 gi|240112986|ref|ZP_04727476.1| hypothetical protein NgonM_05321 [Neisseria gonorrhoeae MS11]
 gi|254493790|ref|ZP_05106961.1| periplasmic protein [Neisseria gonorrhoeae 1291]
 gi|268594847|ref|ZP_06129014.1| periplasmic protein [Neisseria gonorrhoeae 35/02]
 gi|268599065|ref|ZP_06133232.1| periplasmic protein [Neisseria gonorrhoeae MS11]
 gi|193933984|gb|ACF29808.1| Conserved hypothetical protein [Neisseria gonorrhoeae NCCP11945]
 gi|226512830|gb|EEH62175.1| periplasmic protein [Neisseria gonorrhoeae 1291]
 gi|268548236|gb|EEZ43654.1| periplasmic protein [Neisseria gonorrhoeae 35/02]
 gi|268583196|gb|EEZ47872.1| periplasmic protein [Neisseria gonorrhoeae MS11]
 gi|317164292|gb|ADV07833.1| hypothetical protein NGTW08_0865 [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 237

 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 43/125 (34%), Gaps = 11/125 (8%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S   V   + +Y +A+   +   FS A               +A++S+ +    +   G 
Sbjct: 111 SAHTVETAQNLYNQALKHYQNGRFSAAAALLKGADGGD-GGSIAQRSMYLLLQSRARMGN 169

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVER 168
            +    +G  Y  ++ +S     V + +G    +   +D+                +++ 
Sbjct: 170 CESVIEIGGRYANRFKDSPTAPEVIFKIGECQYRLQQKDIAR---------ATWRSLIQT 220

Query: 169 YTNSP 173
           Y  SP
Sbjct: 221 YPGSP 225


>gi|148654935|ref|YP_001275140.1| hypothetical protein RoseRS_0774 [Roseiflexus sp. RS-1]
 gi|148567045|gb|ABQ89190.1| TPR repeat-containing protein [Roseiflexus sp. RS-1]
          Length = 1534

 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 74/209 (35%), Gaps = 26/209 (12%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +  +++   +L+  +  +A          +P    A +   M      S  +Y++A    
Sbjct: 7   QAAFDQTRQWLESDDLDRAIGMVQHILETYPKCLEAHQ---MLGEAFLSNRQYEEARIEF 63

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           E+ ++  PE   +      +GM+  ++ +            +    R +E   + P ++ 
Sbjct: 64  EKVLSFDPEH--IP-ALVGLGMTSERLGQLSS--------AIAAFERALEIKPDLPELRS 112

Query: 178 ARFYV-------TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
               +            +L+   V + R Y K      AI  F+ V+A+  D     +A 
Sbjct: 113 QLLRLYTEAWGSEYAHLRLSR--VGLARLYAKGHMLPQAISEFRQVVADQPD---RLDAR 167

Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQ 259
             L EA       +EA EV   I   +P 
Sbjct: 168 VALAEALWRDEQEEEALEVCRAILVSHPD 196


>gi|91200049|emb|CAJ73091.1| hypothetical protein kuste2346 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 224

 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 40/134 (29%), Gaps = 11/134 (8%)

Query: 17  YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN---- 72
           Y+++               V + +  SR       +  R   ++   A     E++    
Sbjct: 23  YKIFIGIGVAVVISIAAVTVTFVKAKSRKDETAWQSMWRINSDLAMAAQAGKTEKDKNEA 82

Query: 73  FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK---- 128
            + A E F         +G     L     V Y    Y +A     +++ +Y        
Sbjct: 83  LNNAIESFEYIEEALASSGTTPWILFQKGNVYYELKNYDEAIRAYNDFLQRYSGHPIAFL 142

Query: 129 ---NVDYVYYLVGM 139
              ++ Y Y   G+
Sbjct: 143 AKQSLGYAYEEKGL 156



 Score = 39.7 bits (92), Expect = 0.40,   Method: Composition-based stats.
 Identities = 11/95 (11%), Positives = 35/95 (36%), Gaps = 11/95 (11%)

Query: 30  IAVCFLVGWERQSSRDVYLDSVTDVRYQRE-----------VYEKAVLFLKEQNFSKAYE 78
           +A+    G   +   +   +++    Y  E           +++K  ++ + +N+ +A  
Sbjct: 66  LAMAAQAGKTEKDKNEALNNAIESFEYIEEALASSGTTPWILFQKGNVYYELKNYDEAIR 125

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
            +N   + +    +A  +     +     G  ++A
Sbjct: 126 AYNDFLQRYSGHPIAFLAKQSLGYAYEEKGLLEEA 160


>gi|262191199|ref|ZP_06049399.1| TPR domain protein in aerotolerance operon [Vibrio cholerae CT
           5369-93]
 gi|262032939|gb|EEY51477.1| TPR domain protein in aerotolerance operon [Vibrio cholerae CT
           5369-93]
          Length = 624

 Score = 45.1 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 48/133 (36%), Gaps = 14/133 (10%)

Query: 4   VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63
           +L  A+C+F         F+L + F +++     W    S  +  D      +  E Y +
Sbjct: 309 LLIAALCLFRRGVI----FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMRMFNNEQYAQ 361

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLG 117
           A    ++  +  A  Y+ +          ++ +          A      G+ Q+A  L 
Sbjct: 362 AAEAFRDPRWQGAARYYAK-DYQGAIDAYSQIANPDTATQYNLANAYAQTGELQKAQDLY 420

Query: 118 EEYITQYPESKNV 130
           E+ + Q P  ++ 
Sbjct: 421 EQVLKQEPNHQDA 433


>gi|172036671|ref|YP_001803172.1| hypothetical protein cce_1756 [Cyanothece sp. ATCC 51142]
 gi|171698125|gb|ACB51106.1| hypothetical protein cce_1756 [Cyanothece sp. ATCC 51142]
          Length = 309

 Score = 45.1 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 16/123 (13%), Positives = 37/123 (30%), Gaps = 15/123 (12%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFA-GVARKSLLMSAFVQYSAGKYQQAAS 115
           R  Y + ++  K  N+ +A E +      +   +           A        + QA +
Sbjct: 141 RAYYNQGLVHYKLGNYQQALESYNQALETNHEDSLEHKTWIYYDRALAYLKLENFSQAIA 200

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SP 173
                +   P+       YY  G +Y ++           +   +  + ++       S 
Sbjct: 201 NFTHVLILNPQDLQ---AYYQRGYAYQKL--------GNYQGAFRDFTEVITLNPQLTSA 249

Query: 174 YVK 176
           Y+ 
Sbjct: 250 YIN 252



 Score = 38.9 bits (90), Expect = 0.65,   Method: Composition-based stats.
 Identities = 41/269 (15%), Positives = 79/269 (29%), Gaps = 82/269 (30%)

Query: 17  YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
           Y +  F        A+ F +G+   SS ++              + + + +L EQN+ +A
Sbjct: 6   YLVKDFLKFFVLIAAILFCLGFSSPSSENLSNSPD---------FSQGIRYLNEQNYQEA 56

Query: 77  YEYFNQC---SRDFPFAGVARK-----------------------------SLLMSAFVQ 104
              F Q       +  +  + +                             + L      
Sbjct: 57  ILKFTQVINDKNQWIASAYSNRCLAYLQVNNNQAAKIDCEEALERNSENIEAYLNKGLAD 116

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           Y    Y Q+    +E I ++ +    DY  YY  G+ + ++           +  L+  +
Sbjct: 117 YRLENYTQSLVAYQEVIKRH-KH---DYRAYYNQGLVHYKL--------GNYQQALESYN 164

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVE-----IGRY------------------- 199
           + +E   N       + ++   R  LA  ++E     I  +                   
Sbjct: 165 QALET--NHEDSLEHKTWIYYDR-ALAYLKLENFSQAIANFTHVLILNPQDLQAYYQRGY 221

Query: 200 -YLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            Y K G Y  A   F  V+        A 
Sbjct: 222 AYQKLGNYQGAFRDFTEVITLNPQLTSAY 250


>gi|300866716|ref|ZP_07111400.1| exported hypothetical protein [Oscillatoria sp. PCC 6506]
 gi|300335316|emb|CBN56560.1| exported hypothetical protein [Oscillatoria sp. PCC 6506]
          Length = 201

 Score = 45.1 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 62/188 (32%), Gaps = 29/188 (15%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
              +YK    +    A+  L      + +      +T  +   + +++ V  L + ++S 
Sbjct: 1   MKSIYKAITFLGLIAALSGL----PSAVKAELSPIITAQKSIDQFFDRGVDKLLKGDYSG 56

Query: 76  AYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
           A E F +  R  P      + +     A      G  Q A +   + I   P      Y 
Sbjct: 57  AIEDFTEAIRLNPNQPGIYSNRG---LARAS--KGDIQGAIADYNQAIRINPN-----YA 106

Query: 134 --YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
             Y   G++Y+ +        +  +  L    + +    N   +  A +     R+ L  
Sbjct: 107 IGYLHRGLAYSAL--------KNYQYALSDYDQALRLNPN---LGEAYYNRGNIRHYLKE 155

Query: 192 KEVEIGRY 199
           KE  +  +
Sbjct: 156 KEAALADF 163


>gi|116619354|ref|YP_821510.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116222516|gb|ABJ81225.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 343

 Score = 45.1 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 59/217 (27%), Gaps = 34/217 (15%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D+    + +   +E     L++Q F+ A       +        + +  L      Y   
Sbjct: 122 DAGAREKAESLYFEAVQPLLQQQKFADAIAILGTATERL---KNSAQLELALGVAYYGMR 178

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           ++ +AA      I     S  +D  Y  +G  +   I         T+      +R    
Sbjct: 179 RFDEAAGAFLRTIAI---SPAIDQPYLFLGK-FLGQIPG--RLPEVTEQ----FARYERA 228

Query: 169 YTNS------------------PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
              S                     +           + A+   E+G    +  +Y  A 
Sbjct: 229 SPESSTGYLLHAKALNAQSIEPEAARKLLEKALSINERDASGHFELGSVLDRMQQYADAA 288

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
             F+  +           A  RL   Y  L   D AR
Sbjct: 289 REFERAIEL---DPAEPAAHYRLSRVYDRLGKPDAAR 322


>gi|325917649|ref|ZP_08179843.1| tetratricopeptide repeat protein,von Willebrand factor type A-like
           protein [Xanthomonas vesicatoria ATCC 35937]
 gi|325536113|gb|EGD07915.1| tetratricopeptide repeat protein,von Willebrand factor type A-like
           protein [Xanthomonas vesicatoria ATCC 35937]
          Length = 608

 Score = 45.1 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 39/111 (35%), Gaps = 9/111 (8%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           ++    +     +C L   +   + D  L    D   Q+ + +  V   ++ +F+ A + 
Sbjct: 323 FRRRAVVAMVALMCVLPLAQPAQAADGTLWQRADQVQQQRL-DAGVQAYRKGDFAAAQKA 381

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           F              + L          G+Y +A +  +  + Q+P+  + 
Sbjct: 382 FEGVP--------TDEGLYNLGNALARQGQYDEAIAAYDRALKQHPKQADA 424


>gi|325105744|ref|YP_004275398.1| Tetratricopeptide TPR_1 repeat-containing protein [Pedobacter
           saltans DSM 12145]
 gi|324974592|gb|ADY53576.1| Tetratricopeptide TPR_1 repeat-containing protein [Pedobacter
           saltans DSM 12145]
          Length = 468

 Score = 45.1 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 69/205 (33%), Gaps = 32/205 (15%)

Query: 63  KAVLFLKEQNFSKAYE-YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           +  ++     + +A E  F           +  + L+  A+V  + G Y+QA    +  +
Sbjct: 109 RGNIYENLGRYDEALEALFKALE----HTDMQEEVLMQIAYVYQNLGDYEQAIEYLKRCL 164

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
            +  E+++     Y +   Y  + +            +Q+  + ++    S Y       
Sbjct: 165 QKNMENQD---ALYELAFCYDVLDKQ--------DESIQFYQQYIDNEPYS-YAAWYNLG 212

Query: 182 VTVGRNQLAAKEVEIGRY-----------YLKRGEYVAAIPRFQLVLANYSDA--EHAEE 228
               + ++  K ++   Y           Y  +G  +  + +F+  +  +         +
Sbjct: 213 NAYHKYEMFEKAIDAYDYALLIKEDFSSAYFNKGNTLIQLNKFEEAIEVFKQTFDYEMPD 272

Query: 229 AMAR--LVEAYVALALMDEAREVVS 251
           A     + E Y  L  M+EAR    
Sbjct: 273 AHTYCAIGECYEKLEKMEEARNYYK 297


>gi|229522839|ref|ZP_04412253.1| TPR domain protein in aerotolerance operon [Vibrio cholerae TM
           11079-80]
 gi|229340056|gb|EEO05064.1| TPR domain protein in aerotolerance operon [Vibrio cholerae TM
           11079-80]
          Length = 623

 Score = 44.7 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 48/133 (36%), Gaps = 14/133 (10%)

Query: 4   VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63
           +L  A+C+F         F+L + F +++     W    S  +  D      +  E Y +
Sbjct: 309 LLIAALCLFRRGVI----FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMRMFNNEQYAQ 361

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLG 117
           A    ++  +  A  Y+ +          ++ +          A      G+ Q+A  L 
Sbjct: 362 AAEAFRDPRWQGAARYYAK-DYQGAIDAYSQIANPDTATQYNLANAYAQTGELQKAQDLY 420

Query: 118 EEYITQYPESKNV 130
           E+ + Q P  ++ 
Sbjct: 421 EQVLKQEPNHQDA 433


>gi|186517170|ref|NP_195462.3| SRFR1 (SUPPRESSOR OF RPS4-RLD 1); protein complex scaffold
           [Arabidopsis thaliana]
 gi|332661397|gb|AEE86797.1| suppressor of RPS4-RLD 1 / tetratricopeptide repeat
           domain-containing protein [Arabidopsis thaliana]
          Length = 1052

 Score = 44.7 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 63/191 (32%), Gaps = 40/191 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
            + +  + E N++KA   F++       +P      ++L+          + + A +   
Sbjct: 302 SRGIAQVNEGNYTKAISIFDKVLKEEPTYP------EALIGRGTAYAFQRELESAIADFT 355

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           + I   P        +   G + A +   V          ++ +++ +    NSP V   
Sbjct: 356 KAIQSNPA---ASEAWKRRGQARAALGEYV--------EAVEDLTKALVFEPNSPDVL-- 402

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
                         E  I  +  K  ++ AA+    + L    D + A      L  A+ 
Sbjct: 403 -------------HERGIVNF--KSKDFTAAVKDLSICLKQEKDNKSAY---TYLGLAFA 444

Query: 239 ALALMDEAREV 249
           +L    +A E 
Sbjct: 445 SLGEYKKAEEA 455


>gi|73993539|ref|XP_534539.2| PREDICTED: similar to Tetratricopeptide repeat protein 10 (TPR
           repeat protein 10) (Recessive polycystic kidney disease
           protein Tg737) (TgN(Imorpk)737Rpw) [Canis familiaris]
          Length = 825

 Score = 44.7 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 32/240 (13%), Positives = 73/240 (30%), Gaps = 40/240 (16%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLM 99
           Q+S    L   +D      +  K        ++ KA E++      D   +     +L  
Sbjct: 469 QASSYADLAVNSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYN 524

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
                    +  +A      ++  +   +N   V Y +   Y  M              +
Sbjct: 525 IGLTYKRLNRLDEALDC---FLKLHTILRNSAQVLYQIANVYELM--------EDPHQAI 573

Query: 160 QYMSRIVERYT-NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA-IPRFQLVL 217
           +++ +++     +S     A   +    +    K  +  +YY +   Y  + I   + + 
Sbjct: 574 EWLMQLISVVPTDSR----ALSKLGELYDSEGDKS-QAFQYYYESYRYFPSNIEVIEWLG 628

Query: 218 ANYSDAEHAEEAMARLVEA-----------------YVALALMDEAREVVSLIQERYPQG 260
           A Y D +  E+A+     A                 +       +A +    I  ++P+ 
Sbjct: 629 AYYIDTQFCEKAIQYFERASLIQPVSLKWKLMVASCFRRSGNYQKALDTYKDIHRKFPEN 688



 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 74/233 (31%), Gaps = 67/233 (28%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117
            KA+ +L++++F++A E      +    + V   +    +F+ Y   ++ QA+S      
Sbjct: 421 NKAITYLRQKDFNQAVETLKMFEKKD--SRVKSAAATNLSFLYYLENEFAQASSYADLAV 478

Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147
             + Y    P    +K      N DY                     Y +G++Y ++ R 
Sbjct: 479 NSDRY---NPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKRLNR- 534

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
                      L    ++     NS                 A    +I   Y    +  
Sbjct: 535 -------LDEALDCFLKLHTILRNS-----------------AQVLYQIANVYELMEDPH 570

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            AI   + ++   S       A+++L E Y +     +A +        +P  
Sbjct: 571 QAI---EWLMQLISVVPTDSRALSKLGELYDSEGDKSQAFQYYYESYRYFPSN 620


>gi|258621417|ref|ZP_05716451.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|258586805|gb|EEW11520.1| conserved hypothetical protein [Vibrio mimicus VM573]
          Length = 253

 Score = 44.7 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 20/143 (13%), Positives = 56/143 (39%), Gaps = 14/143 (9%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
            S+ +    + +    ++  Y+ AV   LK+++++ A   F +   D+P +  +  S   
Sbjct: 119 SSNDEAAQGTFSSDANEQAAYQNAVDLILKKRDYAGAIAAFKKFQTDYPNSTFSANSHYW 178

Query: 100 SAFVQYSAGKYQQAASLGEEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
              + ++  + ++A    + +I    + +S         +G        D+       + 
Sbjct: 179 LGQLYFAKKEDKEA---AKSFIAVVSHQDSNKRADALVKLG--------DIAKRNNNAEQ 227

Query: 158 MLQYMSRIVERYTNSPYVKGARF 180
             ++  + ++ Y +S   K A+ 
Sbjct: 228 ARKFYQQAIDEYPDSASAKVAKE 250



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 45/130 (34%), Gaps = 15/130 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            Q   D+   +R     +    +    Y NS +               A     +G+ Y 
Sbjct: 139 YQNAVDLILKKRDYAGAIAAFKKFQTDYPNSTFS--------------ANSHYWLGQLYF 184

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + E   A   F  V+++  D+    +A+ +L +        ++AR+      + YP   
Sbjct: 185 AKKEDKEAAKSFIAVVSH-QDSNKRADALVKLGDIAKRNNNAEQARKFYQQAIDEYPDSA 243

Query: 262 WARYVETLVK 271
            A+  +  +K
Sbjct: 244 SAKVAKESLK 253


>gi|260433776|ref|ZP_05787747.1| tetratricopeptide TPR_2 repeat protein [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260417604|gb|EEX10863.1| tetratricopeptide TPR_2 repeat protein [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 500

 Score = 44.7 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 45/132 (34%), Gaps = 33/132 (25%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++  + +  ++++ A   F       P+            + Q  AG+Y +A+     + 
Sbjct: 329 QQGQIAMNHKDYAAASTLFQD-----PYHR---------GYAQLKAGQYAEASET---FA 371

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                +    +     GM+    IR+     R  +  +      +ER  +      A + 
Sbjct: 372 QL--STPEAAFAE---GMA---RIRN-----RQYRPAIAAFETALERRPD---WPEAAYN 415

Query: 182 VTVGRNQLAAKE 193
           + V +  LA  E
Sbjct: 416 LAVAQAILAEVE 427


>gi|254443494|ref|ZP_05056970.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
           DG1235]
 gi|198257802|gb|EDY82110.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
           DG1235]
          Length = 413

 Score = 44.7 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 49/236 (20%), Positives = 84/236 (35%), Gaps = 27/236 (11%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
              LD         + YE A+   K  +   A  YF+               L     + 
Sbjct: 51  KKTLDPELASEQVMQYYEAAITEWKGGDVEFAERYFSAALGVPTEVPEKEMVLSKMGELY 110

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY----------------AQMIRDV 148
             +G + +AA++ E   T++P+S+ +  VY  +G  Y                     +V
Sbjct: 111 NKSGMFPKAAAIYERLATEFPDSRRLPEVYMAIGNIYRKMGAQELAISRYYMVLNSSLNV 170

Query: 149 PYDQR--------ATKLMLQYMSRIVERYTNSPYVKGARFYVTVG-RNQLAAKEVEIGRY 199
            +DQ           KL +    +  E Y  S  +  A F + +    +L      +   
Sbjct: 171 SFDQLEKYRQLSLDAKLAIAETHKEREEYQESYRLYQALFRLELRPVERLRVH-YRMCYL 229

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQ 254
             +   Y  A+ + +L L  Y ++ H  E    L ++Y  L    EA REVV ++Q
Sbjct: 230 LYELANYQQAVSQLKLFLDEYPESPHNPELRYLLAKSYERLNRKPEALREVVHILQ 285


>gi|325922264|ref|ZP_08184045.1| tetratricopeptide repeat protein,von Willebrand factor type A-like
           protein [Xanthomonas gardneri ATCC 19865]
 gi|325547217|gb|EGD18290.1| tetratricopeptide repeat protein,von Willebrand factor type A-like
           protein [Xanthomonas gardneri ATCC 19865]
          Length = 614

 Score = 44.7 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 11/74 (14%), Positives = 29/74 (39%), Gaps = 8/74 (10%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           Q++  +  V   ++ +F+ A + F              + L          G+Y +A + 
Sbjct: 362 QQQRLDAGVQAYRKGDFAAAQKAFE--------GVHTDEGLYNLGNALARQGQYDEAIAA 413

Query: 117 GEEYITQYPESKNV 130
            +  + Q+P+ ++ 
Sbjct: 414 YDRALKQHPDQQDA 427


>gi|258405417|ref|YP_003198159.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfohalobium retbaense DSM 5692]
 gi|257797644|gb|ACV68581.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfohalobium retbaense DSM 5692]
          Length = 360

 Score = 44.7 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 42/114 (36%), Gaps = 11/114 (9%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           +  + + F+ A   L+      +++         +    ++ +    +      KA + F
Sbjct: 16  RALVALLFAFACLSLLNPVSGWTQNGQTP-----QDPTAIFREGSNAMALGKLDKAVQLF 70

Query: 81  NQCSRDFPFAGVA----RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
               R  P +G +     +S +  A V Y+     +AA+   E +  YP++   
Sbjct: 71  KTIPR--PESGESGKLFVQSRMQLARVYYAQEDLDKAAAACREILAVYPDNAEA 122


>gi|186684446|ref|YP_001867642.1| hypothetical protein Npun_R4324 [Nostoc punctiforme PCC 73102]
 gi|186466898|gb|ACC82699.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102]
          Length = 763

 Score = 44.7 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 30/233 (12%), Positives = 71/233 (30%), Gaps = 40/233 (17%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++ K           +A   ++Q      F     ++        ++ G+ ++A +  ++
Sbjct: 470 LFAKGNALFNLGRLEEAIASYDQALN---FKPDDHQAWYNRGIALFNLGRLEEAIASYDQ 526

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +   P+       +Y  G++   + R         +  +    + +    +        
Sbjct: 527 ALNFKPDDHQ---AWYNRGIALFNLGR--------LEEAIASYDQALNFKPDKDNAW--N 573

Query: 180 FYVTVGRNQLAAKEVEIGRY-------------YLKRGEYVAAIPRFQLVLANYSDA--- 223
                    L   E  I  Y             +  RG  +  + R +  +A++  A   
Sbjct: 574 NRGIALVE-LGRLEEAIASYDQALNFKPDDHQAWYNRGIALFNLGRLEEAIASFDQALNF 632

Query: 224 -EHAEEAMARLVEAYVALALMDEA----REVVSLIQERYPQGYWARYVETLVK 271
                EA      A V L  ++EA     + + +  + +    W  +   LVK
Sbjct: 633 KPDYHEAWYNRGTALVELGRLEEAIASFDQAIKIKSDDHQ--AWNNWGYALVK 683


>gi|225620729|ref|YP_002721987.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
 gi|225215549|gb|ACN84283.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
          Length = 771

 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 28/217 (12%), Positives = 73/217 (33%), Gaps = 43/217 (19%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           ++  + + ++    + + +A + + +     P   +   + +   F + +   Y++A   
Sbjct: 104 EKAYFNRGLIKSNLEMYKEAIDDYTKVIELNPNNEI---AYINRGFAKSNLEMYEEAIHD 160

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
               I   P +K          ++Y   I     D +  +  + Y ++ +E   N     
Sbjct: 161 YINVIELNPNNK----------LAYIN-IGFTKSDLKMYEEAIYYFNKSIELDPN----- 204

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD--AEHAEEAMARLV 234
                ++      +          L    Y  AI  F  V+    +  + +   A+++L 
Sbjct: 205 ---DKISYISRGFSK---------LNLKMYEEAIKDFDKVIELNPNDESAYFNRALSKL- 251

Query: 235 EAYVALALMDEA-REVVSLIQERYPQGYWARYVETLV 270
                L + +EA ++   +I+          Y   L+
Sbjct: 252 ----NLEIYEEAIKDFTKVIEANNKN----EYAYLLI 280



 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 44/112 (39%), Gaps = 13/112 (11%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           +D       +   +   + +A+  L  + + +A + F +             + L+  F 
Sbjct: 227 KDFDKVIELNPNDESAYFNRALSKLNLEIYEEAIKDFTKVIEANNKNEY---AYLLIVFA 283

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS------YAQMIRDVP 149
           Q +  KY+++ +  ++ I     ++   Y YYL  +S      Y + I D+ 
Sbjct: 284 QINLKKYRESINYIDKAIELN-NNR---YWYYLRFLSKINLGKYNEAINDIN 331


>gi|163746798|ref|ZP_02154155.1| adenylyl cyclase class-3/4/guanylyl cyclase [Oceanibulbus indolifex
           HEL-45]
 gi|161379912|gb|EDQ04324.1| adenylyl cyclase class-3/4/guanylyl cyclase [Oceanibulbus indolifex
           HEL-45]
          Length = 565

 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 51/170 (30%), Gaps = 36/170 (21%)

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA-QMIRDVPYDQRATKL 157
              F      +++ A +  +  +   P   NV        MS     +      + +  L
Sbjct: 409 ELGFAHLYRKEHEAALNAYDRALKLNPNDANV--------MSDMADALAHSGRSEESIDL 460

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
           + + M R+   Y +  YV                    +G  Y         + R+   +
Sbjct: 461 LQKAM-RLNPFYPD-QYVW------------------HLGGAYFN-------LKRYDDAI 493

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
                 ++  E    L  +Y  L   DEA+     ++  +P     R+ +
Sbjct: 494 KTIQKMQNPTEGRRILAASYAYLGRKDEAQSEADRVRRAHPDFAAERWAD 543


>gi|156744125|ref|YP_001434254.1| TPR repeat-containing CheR-type MCP methyltransferase [Roseiflexus
           castenholzii DSM 13941]
 gi|156235453|gb|ABU60236.1| MCP methyltransferase, CheR-type with Tpr repeats [Roseiflexus
           castenholzii DSM 13941]
          Length = 502

 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 48/142 (33%), Gaps = 24/142 (16%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           E+A   +      +A +         P + +A ++L++ A V    G+   A +     +
Sbjct: 348 EQAQALIDAGRIDEAMDLLRSI---HPNSSLAPRALVLVARVHADRGELDLAIAEARRAL 404

Query: 122 TQYPESKNVD----YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
                   +D      Y L+G  YA+  +            +Q + R      ++  V  
Sbjct: 405 -------EIDALRSDAYLLIGTIYARQGQG--------NEAIQALERARYLDPDAALVSY 449

Query: 178 --ARFYVTVGRNQLAAKEVEIG 197
             A  Y   GR + A +E    
Sbjct: 450 HLALAYRQAGRQEQAMREFRSA 471


>gi|156346795|ref|XP_001621532.1| hypothetical protein NEMVEDRAFT_v1g221878 [Nematostella vectensis]
 gi|156207578|gb|EDO29432.1| predicted protein [Nematostella vectensis]
          Length = 640

 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 63/197 (31%), Gaps = 45/197 (22%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR---KSLLMSAFVQYSAGKYQQAASLGEEY 120
                ++  + +A  ++ +  R +      +   K+ L+     Y  GKY++A    +E 
Sbjct: 275 GNTHYQQGKYEEAIGHYKEALRLYQKTSDDQGQGKAHLLIGNTHYQQGKYEEARGHYKEA 334

Query: 121 ITQYPESKNVDY----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
           +  Y ++ + D      + L+G ++ Q        Q   +    +    +  Y  +   +
Sbjct: 335 LRLYQKTSD-DQGQGKAHLLIGNTHDQ--------QGKYEEARGHYKEALRLYQKTSDDQ 385

Query: 177 ---GARFYVTVGRNQLAAKEVEIGRY------YLKR--------------------GEYV 207
               A   +    NQ    E  IG Y      Y K                     G+Y 
Sbjct: 386 GQGKAHLLIGNTHNQQGKYEEAIGHYKEALRLYQKTSDDQGQGEAHLLIGNTHYQQGKYE 445

Query: 208 AAIPRFQLVLANYSDAE 224
            AI  ++  L  Y    
Sbjct: 446 EAIGHYKEALRLYQKTS 462



 Score = 44.0 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 38/235 (16%), Positives = 75/235 (31%), Gaps = 53/235 (22%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y++        ++ +A   + + S D         + L+     Y  GKY++A    +E 
Sbjct: 239 YQQGKYEEAIGHYKEALRLYQKTSDDQGQGE----AHLLIGNTHYQQGKYEEAIGHYKEA 294

Query: 121 ITQYPESKNVDY----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
           +  Y ++ + D      + L+G ++ Q        Q   +    +    +  Y  +   +
Sbjct: 295 LRLYQKTSD-DQGQGKAHLLIGNTHYQ--------QGKYEEARGHYKEALRLYQKTSDDQ 345

Query: 177 ---GARFYVTVGRNQLAAKEVEIGRY------YLKR--------------------GEYV 207
               A   +    +Q    E   G Y      Y K                     G+Y 
Sbjct: 346 GQGKAHLLIGNTHDQQGKYEEARGHYKEALRLYQKTSDDQGQGKAHLLIGNTHNQQGKYE 405

Query: 208 AAIPRFQLVLANYSDAEHAE---EAMARLVEAYVALALMDEA----REVVSLIQE 255
            AI  ++  L  Y      +   EA   +   +      +EA    +E + L Q+
Sbjct: 406 EAIGHYKEALRLYQKTSDDQGQGEAHLLIGNTHYQQGKYEEAIGHYKEALRLYQK 460



 Score = 43.2 bits (101), Expect = 0.036,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 60/190 (31%), Gaps = 43/190 (22%)

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVAR---KSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
           +  + +A  ++ +  R +      +   K+ L      Y  GKY++A    +E +  Y +
Sbjct: 41  QGKYEEAIGHYKEALRLYQRTSDDQGQGKAHLFIGNAHYQQGKYEEAIGHYKEALRLYQK 100

Query: 127 SKN---VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK---GARF 180
           + +       + L+G ++ Q        Q   +    +    +  Y  +   +    A  
Sbjct: 101 TSDDQGQGEAHLLIGNTHDQ--------QGKYEEARGHYKEALRLYQKTSDDQGQGKAHV 152

Query: 181 YVTVGRNQLAAKEVEIGRY------YLKR--------------------GEYVAAIPRFQ 214
            +    +Q    E  IG Y      Y K                     G+Y  AI  ++
Sbjct: 153 LIGHKHDQQGKYEEAIGHYKEALRLYQKTSDDQGQGKAHLLIGNTHNQQGKYEEAIGHYK 212

Query: 215 LVLANYSDAE 224
             L  Y    
Sbjct: 213 EALRLYQKTS 222



 Score = 40.5 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 58/168 (34%), Gaps = 28/168 (16%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y++        ++ +A   + + S D         + L+     Y  GKY++A    +E 
Sbjct: 439 YQQGKYEEAIGHYKEALRLYQKTSDDQGQGE----AHLLIGITHYLQGKYEEAIGHFKEA 494

Query: 121 ITQYPESKNVDY----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
           +  Y ++ + D      + L+G ++ Q        Q   +  + +    +  Y       
Sbjct: 495 LRLYQKTSD-DQGQGGAHLLIGNTHYQ--------QGKYEEAIGHSKEALRLY---QKTS 542

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
             + +            + IG  +  +G+Y  AI  F+  L  Y    
Sbjct: 543 DDQGH--------GEAHLLIGITHYLQGKYEEAIGHFKEALRLYQKTS 582



 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 61/189 (32%), Gaps = 45/189 (23%)

Query: 72  NFSKAYEYFNQCSRDFP-FAGVARK--SLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           N+ +A E++ +  R +   +   R+  + L+        GKY++A    +E +  Y  + 
Sbjct: 3   NYEEAIEHYKEALRLYQKTSDDQRQGKAHLLIGNAHNLQGKYEEAIGHYKEALRLYQRTS 62

Query: 129 NVDY----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK---GARFY 181
           + D      +  +G ++ Q        Q   +  + +    +  Y  +   +    A   
Sbjct: 63  D-DQGQGKAHLFIGNAHYQ--------QGKYEEAIGHYKEALRLYQKTSDDQGQGEAHLL 113

Query: 182 VTVGRNQLAAKEVEIGRY------YLKR--------------------GEYVAAIPRFQL 215
           +    +Q    E   G Y      Y K                     G+Y  AI  ++ 
Sbjct: 114 IGNTHDQQGKYEEARGHYKEALRLYQKTSDDQGQGKAHVLIGHKHDQQGKYEEAIGHYKE 173

Query: 216 VLANYSDAE 224
            L  Y    
Sbjct: 174 ALRLYQKTS 182


>gi|153806295|ref|ZP_01958963.1| hypothetical protein BACCAC_00551 [Bacteroides caccae ATCC 43185]
 gi|149130972|gb|EDM22178.1| hypothetical protein BACCAC_00551 [Bacteroides caccae ATCC 43185]
          Length = 277

 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 18/121 (14%), Positives = 44/121 (36%), Gaps = 13/121 (10%)

Query: 19  LYKFALTIFFSIAV-CFLVGWER------QSSRDVYLDSVT--DVRYQREVYEKAVLFLK 69
           + K    IF S++V CF              +  +++D+ T  D + +     K      
Sbjct: 1   MKKILFFIFLSMSVTCFAQDSLSIEPRQINEADSIHVDTHTLLDNKLEDVTKTKGDSAYI 60

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
           +++++ A + +    ++      A +         Y  G+  +A    E  +   P + +
Sbjct: 61  KEDYAAAIQIYEALLKN----REASEVYYNLGNSYYKIGEIAKAVLNYERALLLQPGNSD 116

Query: 130 V 130
           +
Sbjct: 117 I 117


>gi|108757662|ref|YP_629584.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622]
 gi|108461542|gb|ABF86727.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622]
          Length = 1089

 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 31/90 (34%), Gaps = 4/90 (4%)

Query: 62  EKAVL--FLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+A      +  +  +A +         +P +  A       A   Y  G+Y +AA L  
Sbjct: 479 EEAQTRNAFEVADARQAMKLLGADFVSRYPRSENALVVKFNIARAYYEDGEYPKAAELFT 538

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
            +   +P+ K       L  +   + + D 
Sbjct: 539 AFALSHPQHKEAPIAGNL-ALDSLRQLNDF 567



 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 50/145 (34%), Gaps = 22/145 (15%)

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
           ++I  +  D       +    R++ +  N+PY+   +F ++        K   +  YYL+
Sbjct: 40  ELIAKLKRDIFKVDRAIGETERLISKSRNAPYLPDLQFRLSELY---VEKSRYV--YYLQ 94

Query: 203 -----RGEYVA------------AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
                 G   A            A+  +  +L  Y D +  ++    L      L   DE
Sbjct: 95  AESRPEGASGAIVSPETRLLKQKAVQMYYRLLREYPDFKDGDQVTFYLAHEQRELGQFDE 154

Query: 246 AREVVSLIQERYPQGYWARYVETLV 270
             + +  +  ++P        E ++
Sbjct: 155 MLKTLGDLTRKFPGSPLRLEAEQIL 179


>gi|225618957|ref|YP_002720183.1| response regulator aspartate phosphatase containing TPR repeat
           domain [Brachyspira hyodysenteriae WA1]
 gi|225213776|gb|ACN82510.1| response regulator aspartate phosphatase containing TPR repeat
           domain [Brachyspira hyodysenteriae WA1]
          Length = 144

 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 34/97 (35%), Gaps = 8/97 (8%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            IF +  V  L+             SV + +Y + + EK       +N+  A  Y+    
Sbjct: 5   FIFLAAVVFLLISCAS-----AVKISVEEGQYPKIIAEKGYTEFGNKNYKTAIAYYQYII 59

Query: 85  RDFPFAGVARK---SLLMSAFVQYSAGKYQQAASLGE 118
            +F     A+    +     F  Y   KY++A    +
Sbjct: 60  DNFDRENYAKDVAWAYYEIGFCYYYQKKYEEALKYFD 96


>gi|225620444|ref|YP_002721701.1| hypothetical protein BHWA1_01527 [Brachyspira hyodysenteriae WA1]
 gi|225215263|gb|ACN83997.1| hypothetical protein BHWA1_01527 [Brachyspira hyodysenteriae WA1]
          Length = 417

 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 28/233 (12%), Positives = 66/233 (28%), Gaps = 27/233 (11%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
           +   D    +V        ++  A      +++  A   ++     +P +  +  S    
Sbjct: 194 KKETDKPAKAVETNPEIIALFNSAEELKNVKDYENAINAYSNIITSYPNSKYSVYSHFRI 253

Query: 101 AFVQYSAGKYQQAASLGEEYITQ-YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
             +      Y  A ++  E        +       Y +G+       +  +D       +
Sbjct: 254 GDIYNQKKDYNNAFNMYNEASKLKNSGNNEKAAAIYSMGV---MKKSENKHD-----EAI 305

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
            Y + ++  Y+ +P    A + +     QL      I                 +  L  
Sbjct: 306 VYFNDVMNNYSQTPLYGNAVYEMADSLKQLGR----ISD----------GANILEKSLEK 351

Query: 220 YSDAEHAEEAMARLVEAYVA----LALMDEAREVVSLIQERYPQGYWARYVET 268
                   +++  L E Y      +   ++A +  +     YP    A+Y   
Sbjct: 352 NVKFSKRGDSILLLAEIYEKGNNNIRDFEKAYKTYNQYLAEYPTSSKAKYAND 404


>gi|118578955|ref|YP_900205.1| hypothetical protein Ppro_0516 [Pelobacter propionicus DSM 2379]
 gi|118501665|gb|ABK98147.1| Tetratricopeptide TPR_2 repeat protein [Pelobacter propionicus DSM
           2379]
          Length = 673

 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 64/200 (32%), Gaps = 24/200 (12%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A +  +   + +A E +++  +  P +       L  A +     +   A    +  +  
Sbjct: 382 ADIRYERGFYQEAVEQYSEFLKLKPDSP---DIQLKLARILAKKKETSLAIDAYDAVLKS 438

Query: 124 YPESKNVDY---VYYL------VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
            P++   +      Y         +++ +   ++  D   T+        +V  Y  +  
Sbjct: 439 APDNPEANREIAALYKAKGMNDRAVAHYRKALELRKDDADTRSA------LVSLYVKNRQ 492

Query: 175 VKGARFYVTVGRNQL---AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
                  +          A    ++G  +  + EY +AI  +Q       D      A+ 
Sbjct: 493 YDEITELLKGAVELFPEDANNHYKLGLIHEFKKEYGSAIACYQKAAELRPD---HARALN 549

Query: 232 RLVEAYVALALMDEAREVVS 251
            L   Y+    + EARE + 
Sbjct: 550 ALGRMYMKTDRISEAREALE 569


>gi|116199257|ref|XP_001225440.1| hypothetical protein CHGG_07784 [Chaetomium globosum CBS 148.51]
 gi|88179063|gb|EAQ86531.1| hypothetical protein CHGG_07784 [Chaetomium globosum CBS 148.51]
          Length = 453

 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 18/146 (12%), Positives = 40/146 (27%), Gaps = 26/146 (17%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSA 107
            T      ++  +        ++  A + +    + +   P    + ++           
Sbjct: 2   ATPEEKATDLKNQGNKAFAAHDWPTAIDLYTQAIELNSKEP-TFWSNRAQ-----AYLKT 55

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
             Y  A     + I   P        YY    +YA ++R         K  ++     V+
Sbjct: 56  EAYGFAVRDATKAIELKPSFVK---AYYRRATAYAAILR--------PKEAVKDFKTCVK 104

Query: 168 RYTNSPYVKGARFYVTVG---RNQLA 190
               +     A+  +        QLA
Sbjct: 105 IDPGNK---DAKLKLVECEKIVRQLA 127


>gi|332260274|ref|XP_003279212.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 1
           [Nomascus leucogenys]
          Length = 823

 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 35/299 (11%), Positives = 88/299 (29%), Gaps = 56/299 (18%)

Query: 2   SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60
                +A+ I +    +  +       +++  + +G +  Q+S    +   +D      +
Sbjct: 428 QKDYNQAVEILKMLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 487

Query: 61  YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
             K        ++ KA E++      D   +     +L           +  +A      
Sbjct: 488 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 540

Query: 120 YITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKL--------- 157
           ++  +   +N   V Y +   Y              Q++  +P D +             
Sbjct: 541 FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREG 600

Query: 158 ----MLQYMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEI 196
                 QY       +               ++ + + A  Y     + +      ++ +
Sbjct: 601 DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMV 660

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
              + + G Y  A+  ++     + +     E +  LV     L L D A+E    ++ 
Sbjct: 661 ASCFRRSGNYQKALDTYKDTHRKFPE---NVECLRFLVRLCTDLGLKD-AQEYAIKLKR 715



 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 66/222 (29%), Gaps = 67/222 (30%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117
            KAV +L+++++++A E      +    + V   +    + + Y    + QA+S      
Sbjct: 420 NKAVTYLRQKDYNQAVEILKMLEKKD--SRVKSAAATNLSALYYMGKDFAQASSYADIAV 477

Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147
             + Y    P    +K      N DY                     Y +G++Y ++ R 
Sbjct: 478 NSDRY---NPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNR- 533

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
                      L    ++     NS                 A    +I   Y       
Sbjct: 534 -------LDEALDCFLKLHAILRNS-----------------AEVLYQIANIYELMENPS 569

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
            AI     V++           +++L E Y       +A + 
Sbjct: 570 QAIEWLMQVVSVIPTDPQV---LSKLGELYDREGDKSQAFQY 608


>gi|58580794|ref|YP_199810.1| hypothetical protein XOO1171 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|58425388|gb|AAW74425.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 607

 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 37/111 (33%), Gaps = 9/111 (8%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           ++    +     VC L   +   + D  L    D   Q+ + +  V   ++ +F+ A + 
Sbjct: 326 FRRRAVVAVLAMVCVLPFAQPARAADGTLWQRADQLQQQRL-DAGVQAYRKGDFAAAQKA 384

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           F              + L          G+Y  A    +  + Q+P  ++ 
Sbjct: 385 FEAVP--------TDEGLYNLGNALARQGQYDAAIDAYDRALKQHPNQQDA 427


>gi|26449774|dbj|BAC42010.1| unknown protein [Arabidopsis thaliana]
 gi|29029044|gb|AAO64901.1| At4g37460 [Arabidopsis thaliana]
          Length = 883

 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 63/191 (32%), Gaps = 40/191 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
            + +  + E N++KA   F++       +P      ++L+          + + A +   
Sbjct: 302 SRGIAQVNEGNYTKAISIFDKVLKEEPTYP------EALIGRGTAYAFQRELESAIADFT 355

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           + I   P        +   G + A +   V          ++ +++ +    NSP V   
Sbjct: 356 KAIQSNPA---ASEAWKRRGQARAALGEYV--------EAVEDLTKALVFEPNSPDVL-- 402

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
                         E  I  +  K  ++ AA+    + L    D + A      L  A+ 
Sbjct: 403 -------------HERGIVNF--KSKDFTAAVKDLSICLKQEKDNKSAY---TYLGLAFA 444

Query: 239 ALALMDEAREV 249
           +L    +A E 
Sbjct: 445 SLGEYKKAEEA 455


>gi|225010245|ref|ZP_03700717.1| TPR repeat-containing protein [Flavobacteria bacterium MS024-3C]
 gi|225005724|gb|EEG43674.1| TPR repeat-containing protein [Flavobacteria bacterium MS024-3C]
          Length = 304

 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 48/167 (28%), Gaps = 25/167 (14%)

Query: 8   AICIFEAWAYQLYKFALTIFFSIAV------CFLVGWERQSSRDVYLDSVTDVRYQREVY 61
            +     W    + F L   F +A         L G   ++        V     +   +
Sbjct: 19  TLKAHTNWLVFFWLFTLVTMFPVAAQNDTQNSLLKGTTEKNQEVKNEGIVNKYSQETAFF 78

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
             A     E NF  A +Y+ +          + +       V Y       +    E+ +
Sbjct: 79  NAATQAYNESNFQLAIDYYEKIIAA---GYHSAELYYNLGNVYYKQNDIASSIYYFEKSL 135

Query: 122 TQYPES----KNVDYVYYL------------VGMSYAQMIRDVPYDQ 152
              P      KN+ +   +            +G +Y ++I+    DQ
Sbjct: 136 LLNPNDQEVIKNLGFAQKMTIDAIPSKEVNGIGKAYLKLIKSQSEDQ 182


>gi|188578239|ref|YP_001915168.1| tetratricopeptide repeat domain protein [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|188522691|gb|ACD60636.1| tetratricopeptide repeat domain protein [Xanthomonas oryzae pv.
           oryzae PXO99A]
          Length = 607

 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 37/111 (33%), Gaps = 9/111 (8%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           ++    +     VC L   +   + D  L    D   Q+ + +  V   ++ +F+ A + 
Sbjct: 326 FRRRAVVAVLAMVCVLPFAQPARAADGTLWQRADQLQQQRL-DAGVQAYRKGDFAAAQKA 384

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           F              + L          G+Y  A    +  + Q+P  ++ 
Sbjct: 385 FEAVP--------TDEGLYNLGNALARQGQYDAAIDAYDRALKQHPNQQDA 427


>gi|4468812|emb|CAB38213.1| putative protein [Arabidopsis thaliana]
 gi|7270728|emb|CAB80411.1| putative protein [Arabidopsis thaliana]
          Length = 1013

 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 63/191 (32%), Gaps = 40/191 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
            + +  + E N++KA   F++       +P      ++L+          + + A +   
Sbjct: 302 SRGIAQVNEGNYTKAISIFDKVLKEEPTYP------EALIGRGTAYAFQRELESAIADFT 355

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           + I   P        +   G + A +   V          ++ +++ +    NSP V   
Sbjct: 356 KAIQSNPA---ASEAWKRRGQARAALGEYV--------EAVEDLTKALVFEPNSPDVL-- 402

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
                         E  I  +  K  ++ AA+    + L    D + A      L  A+ 
Sbjct: 403 -------------HERGIVNF--KSKDFTAAVKDLSICLKQEKDNKSAY---TYLGLAFA 444

Query: 239 ALALMDEAREV 249
           +L    +A E 
Sbjct: 445 SLGEYKKAEEA 455


>gi|323308991|gb|EGA62221.1| Ppt1p [Saccharomyces cerevisiae FostersO]
          Length = 483

 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 50/133 (37%), Gaps = 20/133 (15%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLL--MSAFVQY 105
            +  D     E   +  +F+KE++F KA E +      D      + +S+     AF  +
Sbjct: 4   PTAADRAKALERKNEGNVFVKEKHFLKAIEKYTEAIDLD------STQSIYFSNRAFAHF 57

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               +Q A +  +E I   P++      Y+   +S   ++          K   + ++ +
Sbjct: 58  KVDNFQSALNDCDEAIKLDPKNIK---AYHRRALSCMALLE--------FKKARKDLNVL 106

Query: 166 VERYTNSPYVKGA 178
           ++   N P    A
Sbjct: 107 LKAKPNDPAATKA 119


>gi|284052246|ref|ZP_06382456.1| tetratricopeptide TPR_2 [Arthrospira platensis str. Paraca]
          Length = 751

 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 18/152 (11%), Positives = 43/152 (28%), Gaps = 28/152 (18%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
             + + +  + +A   +       P +     S    A   Y    + +A    ++ I+ 
Sbjct: 232 GKILVNQNRYEQAIYQYQILVNQNPDSQWFYGS---LADACYQNQDWLKALENYQKAISI 288

Query: 124 YPESK--------------NVDYVY--YLVGMS------YAQMIRDVPYDQRATKLMLQY 161
                              ++D     Y   ++      Y + I +V   Q+  +  L+ 
Sbjct: 289 NSNHDWFYNGLGNCLQKLGDLDQAIEAYRNAINIKNCTWYYEEIINVFMSQQKWEEALKV 348

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
               ++   N      A   + +    L   E
Sbjct: 349 CFESLKNDPNH---YQAYTQIKLNLKHLGRHE 377


>gi|226228223|ref|YP_002762329.1| hypothetical protein GAU_2817 [Gemmatimonas aurantiaca T-27]
 gi|226091414|dbj|BAH39859.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 612

 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 30/104 (28%), Gaps = 21/104 (20%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQRE----VYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
           +    G     S+  Y     +    ++    +Y +    L    + KA + F      +
Sbjct: 135 LTGGFGINWSKSQRGYRTEAPEPWATQDMADSLYREGRKALSGDAYRKAADIFRSIRDRY 194

Query: 88  PFAGVARKSLLMSAFVQ-----------------YSAGKYQQAA 114
           P +  A  +    AF                   Y   +Y +AA
Sbjct: 195 PKSSYAPDAPYWEAFALQRLGGEANQRAALEALAYQQREYPKAA 238



 Score = 35.9 bits (82), Expect = 6.5,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 21/63 (33%), Gaps = 10/63 (15%)

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL-------AAKEVEIGRYYLKRGEY 206
           A +        I +RY  S Y   A ++      +L       AA E      Y +R   
Sbjct: 179 AYRKAADIFRSIRDRYPKSSYAPDAPYWEAFALQRLGGEANQRAALE---ALAYQQREYP 235

Query: 207 VAA 209
            AA
Sbjct: 236 KAA 238


>gi|83312307|ref|YP_422571.1| hypothetical protein amb3208 [Magnetospirillum magneticum AMB-1]
 gi|82947148|dbj|BAE52012.1| Uncharacterized protein conserved in bacteria [Magnetospirillum
           magneticum AMB-1]
          Length = 355

 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 35/102 (34%), Gaps = 13/102 (12%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
             Q     ++ Y N      A++++                 + +R ++  +   F    
Sbjct: 247 AEQGFRSFLKTYPNHQLAGNAQYWLGDIA-------------FSQRKDFATSAKLFGEAY 293

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
             Y     A + + +L  ++  L + D+A    +L+   +P 
Sbjct: 294 KKYPKHTKAPDMLYKLGASFGHLDMKDQACRTYALLFAEHPD 335



 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 34/82 (41%), Gaps = 1/82 (1%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY-SAGKYQQAASLGEE 119
           YE+A    ++ ++  A + F    + +P   +A  +      + +     +  +A L  E
Sbjct: 232 YEEAYGLAQKGDYDGAEQGFRSFLKTYPNHQLAGNAQYWLGDIAFSQRKDFATSAKLFGE 291

Query: 120 YITQYPESKNVDYVYYLVGMSY 141
              +YP+      + Y +G S+
Sbjct: 292 AYKKYPKHTKAPDMLYKLGASF 313



 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 11/91 (12%), Positives = 22/91 (24%), Gaps = 7/91 (7%)

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
             A+     G Y  A      ++  YP  +      Y +G       +D     +     
Sbjct: 233 EEAYGLAQKGDYDGAEQGFRSFLKTYPNHQLAGNAQYWLGDIAFSQRKDFATSAKLFGEA 292

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
                   ++Y          + +      L
Sbjct: 293 Y-------KKYPKHTKAPDMLYKLGASFGHL 316


>gi|282899251|ref|ZP_06307223.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
 gi|281195859|gb|EFA70784.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
          Length = 595

 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 45/136 (33%), Gaps = 14/136 (10%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
            G ++ +  D       +  + +  Y +A +  +  +   A   F Q     P+  +   
Sbjct: 267 SGDKQGAINDFTAAINVNPNFAKSYYNRAAIRNELGDKQGAISDFTQFLTFHPYNAL--- 323

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +      + +  G  Q A +   + I   P +      YY  G S +        D    
Sbjct: 324 AYYNRGILHHELGNKQGAINDFTQVIKLNPGNIR---AYYNRGASRS--------DLGDK 372

Query: 156 KLMLQYMSRIVERYTN 171
           +  +   ++++E   N
Sbjct: 373 QGAISDFTKVIEINPN 388


>gi|163786705|ref|ZP_02181153.1| aerotolerance-related exported protein [Flavobacteriales bacterium
           ALC-1]
 gi|159878565|gb|EDP72621.1| aerotolerance-related exported protein [Flavobacteriales bacterium
           ALC-1]
          Length = 252

 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 26/83 (31%), Gaps = 7/83 (8%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSA 107
           SV        V+E+A     E  +++A + + +             + L        Y  
Sbjct: 13  SVFGFSQNDTVFEEANSLYNEGKYAEAIDKYEEIL-----GLDTHSAELYFNLGNANYKL 67

Query: 108 GKYQQAASLGEEYITQYPESKNV 130
                +    E+ +   P  K++
Sbjct: 68  NNIAPSIYYYEKALQLNPTDKDI 90


>gi|332260276|ref|XP_003279213.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 2
           [Nomascus leucogenys]
          Length = 832

 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 35/299 (11%), Positives = 88/299 (29%), Gaps = 56/299 (18%)

Query: 2   SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60
                +A+ I +    +  +       +++  + +G +  Q+S    +   +D      +
Sbjct: 437 QKDYNQAVEILKMLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 496

Query: 61  YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
             K        ++ KA E++      D   +     +L           +  +A      
Sbjct: 497 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 549

Query: 120 YITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKL--------- 157
           ++  +   +N   V Y +   Y              Q++  +P D +             
Sbjct: 550 FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREG 609

Query: 158 ----MLQYMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEI 196
                 QY       +               ++ + + A  Y     + +      ++ +
Sbjct: 610 DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMV 669

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
              + + G Y  A+  ++     + +     E +  LV     L L D A+E    ++ 
Sbjct: 670 ASCFRRSGNYQKALDTYKDTHRKFPE---NVECLRFLVRLCTDLGLKD-AQEYAIKLKR 724



 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 66/222 (29%), Gaps = 67/222 (30%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117
            KAV +L+++++++A E      +    + V   +    + + Y    + QA+S      
Sbjct: 429 NKAVTYLRQKDYNQAVEILKMLEKKD--SRVKSAAATNLSALYYMGKDFAQASSYADIAV 486

Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147
             + Y    P    +K      N DY                     Y +G++Y ++ R 
Sbjct: 487 NSDRY---NPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNR- 542

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
                      L    ++     NS                 A    +I   Y       
Sbjct: 543 -------LDEALDCFLKLHAILRNS-----------------AEVLYQIANIYELMENPS 578

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
            AI     V++           +++L E Y       +A + 
Sbjct: 579 QAIEWLMQVVSVIPTDPQV---LSKLGELYDREGDKSQAFQY 617


>gi|254508500|ref|ZP_05120619.1| tetratricopeptide repeat family protein [Vibrio parahaemolyticus
           16]
 gi|219548612|gb|EED25618.1| tetratricopeptide repeat family protein [Vibrio parahaemolyticus
           16]
          Length = 202

 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 32/89 (35%), Gaps = 19/89 (21%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             LQ+  + +           A                  G+ YL+  +Y +AI  F++V
Sbjct: 11  KALQHFRKALSEDPKCVRASIAL-----------------GKTYLENEDYRSAIKHFEMV 53

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDE 245
           L    D++   E +  L + Y  L   DE
Sbjct: 54  LE--QDSDFVSEVLPILADCYHHLGSEDE 80


>gi|254412148|ref|ZP_05025923.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC
           7420]
 gi|196181114|gb|EDX76103.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC
           7420]
          Length = 427

 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 39/104 (37%), Gaps = 10/104 (9%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
               ++   + +A     +     P+  +A       A   +   +Y+ A S  ++ I  
Sbjct: 296 GAALIQNGEYEQAIAALERAISLDPYDSLAH---YNLAVALHRNQQYEDAISEYQQAILL 352

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            P    +   +Y +G++    ++ V   Q A   +L+  +  +E
Sbjct: 353 NP---KLSLAFYNLGIA----LQQVGRGQEAVSFLLEARNLFIE 389


>gi|117923617|ref|YP_864234.1| hypothetical protein Mmc1_0301 [Magnetococcus sp. MC-1]
 gi|117607373|gb|ABK42828.1| Tetratricopeptide TPR_2 repeat protein [Magnetococcus sp. MC-1]
          Length = 911

 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 71/274 (25%)

Query: 50  SVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
            + D     E +   A+   K+  + KA  Y +   R FP      ++        Y   
Sbjct: 301 KLADQEVTEEYFMNNALAAEKDHQYGKARGYLDAILRTFP------QTQNRELLAFYKVD 354

Query: 109 -----KYQQAASLGEEY---ITQYPESKNVDYVYYL--------------VGMSYAQMIR 146
                ++++A  L EE    +  YP      Y  Y                 ++      
Sbjct: 355 LGKKMQWEKAGWLLEELTGVLNTYPNHYR--YPEYRLLQLQLMNGAHQSERALAAMNDPN 412

Query: 147 DVPYDQRATKL-------------MLQYMSRIVERYTNSPYVKGARFYVTVG-----RNQ 188
               D R                  L+ +  ++E+  ++   + A  Y  +      RN 
Sbjct: 413 LPMNDARVVLEQARAEKGMGHDVEALERLYYLLEKMPDANVRERAGAYFELVDLETQRNH 472

Query: 189 LAA---------------------KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH-A 226
           L                       + +++   Y    ++  A+  +  +L  Y D     
Sbjct: 473 LEKAVKILEEIPDPEMTFLANDPDRYIQLATAYYNHNDFPKALDLYIRILDAYPDTPAVT 532

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
             AM R    Y  +   DEA+ ++  +   YP  
Sbjct: 533 PWAMLRAAMCYRFMNKEDEAKRLLDRLGLIYPNS 566


>gi|147679195|ref|YP_001213410.1| hypothetical protein PTH_2860 [Pelotomaculum thermopropionicum SI]
 gi|146275292|dbj|BAF61041.1| hypothetical protein [Pelotomaculum thermopropionicum SI]
          Length = 196

 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 53/134 (39%), Gaps = 15/134 (11%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           + E A L+    N  +A + + Q     P      ++ L  A   Y + KY  A +  +E
Sbjct: 77  LMELAELYRYTGNPDRAVKTYEQVLTLDPGNS---QARLGIAVTYYFSSKYDLAIAQLQE 133

Query: 120 YITQYPESKNVDYVY-YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            + + P++K    +Y Y++ +            ++     +Q + + +      P V+ A
Sbjct: 134 LLRRDPDNKEAHQLYGYVLAI-----------GKKDYATAIQELEKFISLAKEGPDVEKA 182

Query: 179 RFYVTVGRNQLAAK 192
           R  +   ++  A K
Sbjct: 183 RQAINEWKSAQAGK 196


>gi|161830946|ref|YP_001596060.1| tol-pal system protein YbgF [Coxiella burnetii RSA 331]
 gi|30025847|gb|AAP04427.1| 34 kDa outer membrane protein [Coxiella burnetii]
 gi|161762813|gb|ABX78455.1| tol-pal system protein YbgF [Coxiella burnetii RSA 331]
          Length = 300

 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 43/115 (37%), Gaps = 14/115 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                    +  Y N  YV  A +++                 YL++ +   A   FQ V
Sbjct: 188 KAQASFQNYLNDYPNGSYVANAHYWLGEI--------------YLQQKDRKNAAHEFQTV 233

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
              +  +E   +A  +L         + +A+E ++ I++++P+   A+     ++
Sbjct: 234 RDKFPKSEKVLDAKLKLAIIDAEDGKIKQAKEELTEIKKQHPESTAAQLANIRLQ 288



 Score = 44.0 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 34/125 (27%), Gaps = 45/125 (36%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +A+  L ++ + KA   F                        Y               
Sbjct: 174 YRQALDLLTKKQYDKAQASFQ----------------------NYLND------------ 199

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
              YP    V   +Y +G  Y Q        Q+  K        + +++  S  V  A+ 
Sbjct: 200 ---YPNGSYVANAHYWLGEIYLQ--------QKDRKNAAHEFQTVRDKFPKSEKVLDAKL 248

Query: 181 YVTVG 185
            + + 
Sbjct: 249 KLAII 253


>gi|84622724|ref|YP_450096.1| hypothetical protein XOO_1067 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|84366664|dbj|BAE67822.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 600

 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 37/111 (33%), Gaps = 9/111 (8%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           ++    +     VC L   +   + D  L    D   Q+ + +  V   ++ +F+ A + 
Sbjct: 324 FRRRAVVAVLAMVCVLPFAQPARAADGTLWQRADQLQQQRL-DAGVQAYRKGDFAAAQKA 382

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           F              + L          G+Y  A    +  + Q+P  ++ 
Sbjct: 383 FEAVP--------TDEGLYNLGNALARQGQYDAAIDAYDRALKQHPNQQDA 425


>gi|215918886|ref|NP_819144.2| tol-pal system protein YbgF [Coxiella burnetii RSA 493]
 gi|206583771|gb|AAO89658.2| tol system periplasmic component [Coxiella burnetii RSA 493]
          Length = 305

 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 43/115 (37%), Gaps = 14/115 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                    +  Y N  YV  A +++                 YL++ +   A   FQ V
Sbjct: 193 KAQASFQNYLNDYPNGSYVANAHYWLGEI--------------YLQQKDRKNAAHEFQTV 238

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
              +  +E   +A  +L         + +A+E ++ I++++P+   A+     ++
Sbjct: 239 RDKFPKSEKVLDAKLKLAIIDAEDGKIKQAKEELTEIKKQHPESTAAQLANIRLQ 293



 Score = 44.0 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 34/125 (27%), Gaps = 45/125 (36%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +A+  L ++ + KA   F                        Y               
Sbjct: 179 YRQALDLLTKKQYDKAQASFQ----------------------NYLND------------ 204

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
              YP    V   +Y +G  Y Q        Q+  K        + +++  S  V  A+ 
Sbjct: 205 ---YPNGSYVANAHYWLGEIYLQ--------QKDRKNAAHEFQTVRDKFPKSEKVLDAKL 253

Query: 181 YVTVG 185
            + + 
Sbjct: 254 KLAII 258


>gi|16930360|gb|AAL31868.1| 34kDa outer membrane protein [Coxiella burnetii]
          Length = 300

 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 43/115 (37%), Gaps = 14/115 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                    +  Y N  YV  A +++                 YL++ +   A   FQ V
Sbjct: 188 KAQASFQNYLNDYPNGSYVANAHYWLGEI--------------YLQQKDRKNAAHEFQTV 233

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
              +  +E   +A  +L         + +A+E ++ I++++P+   A+     ++
Sbjct: 234 RDKFPKSEKVLDAKLKLAIIDAEDGKIKQAKEELTEIKKQHPESTAAQLANIRLQ 288



 Score = 44.0 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 34/125 (27%), Gaps = 45/125 (36%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +A+  L ++ + KA   F                        Y               
Sbjct: 174 YRQALDLLTKKQYDKAQASFQ----------------------NYLND------------ 199

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
              YP    V   +Y +G  Y Q        Q+  K        + +++  S  V  A+ 
Sbjct: 200 ---YPNGSYVANAHYWLGEIYLQ--------QKDRKNAAHEFQTVRDKFPKSEKVLDAKL 248

Query: 181 YVTVG 185
            + + 
Sbjct: 249 KLAII 253


>gi|323436110|ref|ZP_01050539.2| conserved hypothetical protein [Dokdonia donghaensis MED134]
 gi|321496425|gb|EAQ38938.2| conserved hypothetical protein [Dokdonia donghaensis MED134]
          Length = 465

 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 48/245 (19%), Positives = 86/245 (35%), Gaps = 54/245 (22%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           KA LF+ E  F KA +   +     P      +  +  A +      +++A  L E+ I 
Sbjct: 72  KAELFIFENKFEKAEQILTELHELEP---HNEEVFIQKANIYSKQDDHKKAIYLLEQAID 128

Query: 123 QYPESKNVDYVYYLVGM-------------SYAQMIRDVPYDQRATK------------- 156
               +   D VY L+GM             S+ + +     D  A               
Sbjct: 129 L--TNDPAD-VYNLIGMEYLFIEDFQNAKLSFMKCLEVDDQDYSALYNVIYCFDFLEQHT 185

Query: 157 LMLQYMSRIVERYTNSPYVKGA-----RFY--VTVGRNQLAAKEVEIG---RY---YLKR 203
             + Y++  +    N+PY + A     + Y  +      L+A +  I    R+   YL++
Sbjct: 186 EAIDYLNMFLN---NNPYCEVAWHQVGKQYFGLKEYEKALSAYDFAIISDDRFVGAYLEK 242

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEE----AMARLVEAYVALALMDEAREVVSLIQERYP- 258
           G+ +  + R+   L NY      E+    A+ R+ + Y  L   + A +         P 
Sbjct: 243 GKVLEKLGRYNEALENYQITLELEDPTSFALLRMGKCYDKLGSDELAIKHFERCVHEDPL 302

Query: 259 -QGYW 262
               W
Sbjct: 303 LDNGW 307


>gi|260753789|ref|YP_003226682.1| hypothetical protein Za10_1560 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|258553152|gb|ACV76098.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
          Length = 356

 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 39/89 (43%), Gaps = 7/89 (7%)

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
           P +  A +  L + +  ++  +Y +A ++ + +I++YP      Y   L+G +Y     D
Sbjct: 223 PNSDPAEQVYL-AGYKLWNDKRYPEAETVLKSFISKYPSHSRASYARNLLGRAYL----D 277

Query: 148 VPYDQRATKLMLQYMSRIVE--RYTNSPY 174
                +A ++       I +  R  +S Y
Sbjct: 278 SGEPAQAAEIFYSNYQSIPQGARAPDSLY 306



 Score = 39.7 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 39/123 (31%), Gaps = 12/123 (9%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
            +     +VY        ++ + +A          +P    A  +  +       +G+  
Sbjct: 223 PNSDPAEQVYLAGYKLWNDKRYPEAETVLKSFISKYPSHSRASYARNLLGRAYLDSGEPA 282

Query: 112 QAASLGEEYITQY---PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           QA    E + + Y   P+        Y +G S   +    P D        +  + +++ 
Sbjct: 283 QA---AEIFYSNYQSIPQGARAPDSLYFLGQSLMALKPARPKD------ACKVYAELLDV 333

Query: 169 YTN 171
           Y N
Sbjct: 334 YGN 336


>gi|254805220|ref|YP_003083441.1| hypothetical protein NMO_1272 [Neisseria meningitidis alpha14]
 gi|254668762|emb|CBA06648.1| conserved hypothetical protein [Neisseria meningitidis alpha14]
 gi|254672437|emb|CBA05813.1| conserved hypothetical protein [Neisseria meningitidis alpha275]
          Length = 237

 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 43/125 (34%), Gaps = 11/125 (8%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S   V   + +Y +A+   K   FS A               +A++S+ +    +   G 
Sbjct: 111 SAHTVETAQNLYNQALKHYKSGRFSAAAALLKGADGGD-GGSIAQRSMYLLLQSRARMGN 169

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVER 168
            +    +G  Y  ++ +S       + +G    +   +D+                +++ 
Sbjct: 170 CESVIEIGGRYANRFKDSPTAPEAMFKIGECQYRLQQKDIAR---------ATWRSLIQA 220

Query: 169 YTNSP 173
           Y +SP
Sbjct: 221 YPSSP 225



 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 20/52 (38%), Gaps = 7/52 (13%)

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             RF+       D+  A EAM ++ E    L   D AR     + + YP   
Sbjct: 181 ANRFK-------DSPTAPEAMFKIGECQYRLQQKDIARATWRSLIQAYPSSP 225


>gi|17229979|ref|NP_486527.1| hypothetical protein all2487 [Nostoc sp. PCC 7120]
 gi|17131579|dbj|BAB74186.1| all2487 [Nostoc sp. PCC 7120]
          Length = 224

 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 44/126 (34%), Gaps = 11/126 (8%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
            Y+   F L++         +    Q+   V   +  +++    + E     +   +++ 
Sbjct: 1   MYKHISFVLSVLLLGGGAATIPSIAQAQVLVVQANNAELKR---LLEDGKRLVDAGDYNG 57

Query: 76  AYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
           A   + Q +R  P     R + +     ++    G +Q A +     I   P + +  Y 
Sbjct: 58  AIAVYQQAARMEP-----RNARIHSGIGYLHAKQGNFQAALAAYRRAIAINPNNSDFFYA 112

Query: 134 Y-YLVG 138
             Y+ G
Sbjct: 113 VGYIKG 118


>gi|320101816|ref|YP_004177407.1| serine/threonine protein kinase [Isosphaera pallida ATCC 43644]
 gi|319749098|gb|ADV60858.1| serine/threonine protein kinase [Isosphaera pallida ATCC 43644]
          Length = 923

 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 40/128 (31%), Gaps = 16/128 (12%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D +    +  +   +     F KA   +++  R  P   +A    L   +   + G +++
Sbjct: 615 DPKDVSALVNRGFTYRLRGEFEKAIRDYDEAIRLAPDHALAH---LNRGYAFSAQGDHER 671

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN- 171
           A +     I   P +      YY  G ++  +              +   ++ +      
Sbjct: 672 AIADFTRSIELEPRNPA---AYYNRGFAWTCL--------GQFARSIPDFTQAIALDPED 720

Query: 172 -SPYVKGA 178
            S Y   A
Sbjct: 721 GSAYANRA 728



 Score = 38.9 bits (90), Expect = 0.84,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 59/188 (31%), Gaps = 42/188 (22%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYE---YFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           D R      ++A+ +    +F +A        + S   P       + L   +  +  G 
Sbjct: 513 DPREPEGFRKRALAYRLMGDFEQAIRDGSTLIELSPRDPT------AYLQRGYSYHQIGD 566

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y +A +   + I   P   +    Y+  G++           +      +Q  + ++E  
Sbjct: 567 YDRAIADYSKAIRLDPGETSG---YFNRGLAL--------RARGMELEAIQDYTSVLEID 615

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
                       V+   N+        G  Y  RGE+  AI  +   +    D      A
Sbjct: 616 P---------KDVSALVNR--------GFTYRLRGEFEKAIRDYDEAIRLAPD-----HA 653

Query: 230 MARLVEAY 237
           +A L   Y
Sbjct: 654 LAHLNRGY 661


>gi|319784523|ref|YP_004143999.1| sulfotransferase [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317170411|gb|ADV13949.1| sulfotransferase [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 555

 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 52/154 (33%), Gaps = 32/154 (20%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           A  +LL  A+    A +  +A  L    + + P         Y++G         + YD 
Sbjct: 39  ADDALLEQAYQFQQAKRLNEAQDLCLRVLARTPNHPL---ALYILG------TVCLGYDD 89

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
            A    L+Y +R +     +PY                   + +   Y+K  EY  AI  
Sbjct: 90  EA---ALRYFARAIGEEPKNPY-----------------YHLGLASAYVKVSEYSPAIEH 129

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
            Q  L          EA+  L +AY+     D A
Sbjct: 130 MQYALELQPG---LIEALCALGDAYIQFDKPDMA 160


>gi|225850059|ref|YP_002730293.1| tetratricopeptide repeat domain protein [Persephonella marina
           EX-H1]
 gi|225646356|gb|ACO04542.1| tetratricopeptide repeat domain protein [Persephonella marina
           EX-H1]
          Length = 559

 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 46/247 (18%), Positives = 92/247 (37%), Gaps = 26/247 (10%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQC 83
           T+   + + +      + + ++YL  +       E+ E+ A ++ +   + KA +  N+ 
Sbjct: 301 TVLSILGMAYESAQRYKKAEEIYLKVLKLEPENSEILERLAEVYTRTGQYEKALDVLNRL 360

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
               P      + LL+ A ++   G    A S  +E  +   +   +   Y+  G+ Y +
Sbjct: 361 YSLDP-RDY--RVLLIMADIENKRGNLDAALSYIQEAKSINDKDPTI---YFFEGI-YYE 413

Query: 144 MIRDVPYDQRATKLMLQ---YMSRIVERYTNS--PYVKGARFYVTVGRNQL------AAK 192
            +      + A K  L+        +  Y  S     +     + + R  L      AA 
Sbjct: 414 KLDQWDKAEEAFKKALELRPDFPDALNYYGYSLIIRNRDIDRAMDMIRKALELVPDSAAY 473

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA----RE 248
              +G  Y K+GEY+ A+   +       D     E    L E   AL   +EA    R+
Sbjct: 474 LDSLGWGYFKKGEYLKALKYIKQAYQKAPDDPVVTE---HLAEVEEALGNKEEALKLYRK 530

Query: 249 VVSLIQE 255
            + +I++
Sbjct: 531 ALEIIEK 537


>gi|149916591|ref|ZP_01905105.1| TPR domain protein [Roseobacter sp. AzwK-3b]
 gi|149809518|gb|EDM69378.1| TPR domain protein [Roseobacter sp. AzwK-3b]
          Length = 156

 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 44/124 (35%), Gaps = 14/124 (11%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           + ++    L+  + + A E+F   +   P    A     M +      G Y  A +  E 
Sbjct: 39  LLKRGRNALEAGDSAAAIEHFTALTDHAP--DFAE-GWHMRSVAYSRVGLYGPALADIER 95

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            ++  P   N     Y +G+   ++ +         +L  +  SR++  + +   V  A 
Sbjct: 96  ALSINPRHFN---AIYGLGIILEEVNK--------PELAHEAFSRVLAIHPHHEAVTEAM 144

Query: 180 FYVT 183
             + 
Sbjct: 145 ERLD 148


>gi|260467068|ref|ZP_05813248.1| tol-pal system protein YbgF [Mesorhizobium opportunistum WSM2075]
 gi|259029177|gb|EEW30473.1| tol-pal system protein YbgF [Mesorhizobium opportunistum WSM2075]
          Length = 368

 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 46/148 (31%), Gaps = 22/148 (14%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
           A       +   S    + ++       E+Y  +  F+   ++  A + F      FP  
Sbjct: 218 APATGAPAKAGKSDGTVVAALPATNDPEELYRNSYQFILSGDYGTAEQGFRDHISRFP-- 275

Query: 91  GVARKSLLMSAFVQYSAGKYQQA----ASLGEEYI---TQYPESKNVDYVYYLVGMSYAQ 143
              R +   +A   Y  G+            E ++     YP++K    +   +G+S   
Sbjct: 276 ---RDAK--TADAHYWLGESLLGQQKFRDAAEVFLAASKDYPKAKKAPDMLLKLGVSL-- 328

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTN 171
               V   Q            I +RY +
Sbjct: 329 ----VGLKQHDV--ACATFGEIGKRYPD 350


>gi|157821925|ref|NP_001100736.1| intraflagellar transport protein 88 homolog [Rattus norvegicus]
 gi|149064079|gb|EDM14349.1| intraflagellar transport 88 homolog (Chlamydomonas) (predicted)
           [Rattus norvegicus]
          Length = 815

 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 31/240 (12%), Positives = 76/240 (31%), Gaps = 40/240 (16%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLM 99
           Q+S    L   +D      +  K        ++ KA E++      D   +     +L  
Sbjct: 469 QASSYADLAVSSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYN 524

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
                    +  +A    + ++  +   +N   V   +   Y +++ D           +
Sbjct: 525 IGLTYKKLNRLDEAL---DSFLKLHAILRNSAQVLCQIANVY-ELMEDPN-------QAI 573

Query: 160 QYMSRIVERYT-NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA-IPRFQLVL 217
           +++ +++     +S     A   +    +    K  +  +YY +   Y  + I   + + 
Sbjct: 574 EWLMQLISVVPTDSQ----ALSKLGELYDSEGDKS-QAFQYYYESYRYFPSNIEVIEWLG 628

Query: 218 ANYSDAEHAEEAMARLVEA-----------------YVALALMDEAREVVSLIQERYPQG 260
           A Y D +  E+A+     A                 +       +A +    I  ++P+ 
Sbjct: 629 AYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKEIHRKFPEN 688



 Score = 35.9 bits (82), Expect = 6.3,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 75/233 (32%), Gaps = 67/233 (28%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117
            KA+ +L++++F++A +      +    + V   +    +F+ Y   ++ QA+S      
Sbjct: 421 NKAITYLRQKDFNQAVDTLKMFEKKD--SRVKSAAATNLSFLYYLENEFAQASSYADLAV 478

Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147
             + Y    P    +K      N DY                     Y +G++Y ++ R 
Sbjct: 479 SSDRY---NPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNR- 534

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
                      L    ++     NS                 A    +I   Y    +  
Sbjct: 535 -------LDEALDSFLKLHAILRNS-----------------AQVLCQIANVYELMEDPN 570

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            AI   + ++   S      +A+++L E Y +     +A +        +P  
Sbjct: 571 QAI---EWLMQLISVVPTDSQALSKLGELYDSEGDKSQAFQYYYESYRYFPSN 620


>gi|332375548|gb|AEE62915.1| unknown [Dendroctonus ponderosae]
          Length = 490

 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 57/178 (32%), Gaps = 33/178 (18%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKS 96
               ++D    S  DV        +A  + K+Q+++ A E + +     P      + +S
Sbjct: 1   MSTDTKDTPSVSPEDVELAETFKNEANEYFKKQSYNAAIELYTKAIEQNPNVPVYYSNRS 60

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRA 154
                F       +  A +   + I   P      YV  +Y    ++  +          
Sbjct: 61  -----FAYLKTECFGYALNDATKSIELDPT-----YVKGFYRRADAHMSI--------GK 102

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVG---RNQLA-AKEVEIGRYYLKRGEYVA 208
            KL  +    + +   N      A+  +        +LA  K + +      + +++A
Sbjct: 103 WKLAQKDYEYVTKVRPNDK---DAKLKLNECSKVVKKLAFEKAISVED----KKKFIA 153


>gi|222099856|ref|YP_002534424.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga neapolitana DSM
           4359]
 gi|221572245|gb|ACM23057.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga neapolitana DSM
           4359]
          Length = 367

 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 83/226 (36%), Gaps = 43/226 (19%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           K  L +++    +  +Y ++     P      ++        Y+ G Y++A    E  + 
Sbjct: 147 KGSLLVEQGKIEEGIKYLDKAVEIDP---WLVQAYASLGEAYYNLGDYEKAVHYWERELE 203

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
             P+ K     Y+++  +Y +M R          L  + + R++ER  ++     A + +
Sbjct: 204 YAPDDKLT---YFVLAEAYQEMNRK--------DLAARTLERLLERDPSNI---PALYQL 249

Query: 183 TVGRNQLA---------AKEVEI-----------GRYYLKRGEYVAAIPRFQLVLANYSD 222
           +     L           + ++I            +  LK G+Y       + ++     
Sbjct: 250 SELYRALGKEEKAKEMEERIMKIRPAYPTEIEPWAKVMLKHGKYREVAEELERIVE---T 306

Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           +     A   LV  YV +  +D+A+E++  +++      W  Y + 
Sbjct: 307 SPLNTLAKLLLVVPYVKMGKIDKAKELLEDLEQT---NIWYYYGKK 349


>gi|212712431|ref|ZP_03320559.1| hypothetical protein PROVALCAL_03525 [Providencia alcalifaciens DSM
           30120]
 gi|212684888|gb|EEB44416.1| hypothetical protein PROVALCAL_03525 [Providencia alcalifaciens DSM
           30120]
          Length = 260

 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 39/112 (34%), Gaps = 14/112 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             +  +   ++ Y  S Y   A +++                    +G    A   F  V
Sbjct: 158 EAIGALQGFIKTYPKSGYQSNANYWLGQLN--------------YNKGSKDDAAFYFATV 203

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           +  Y  ++ + EA+ ++          D+A+ V   + ++YP    A+  E 
Sbjct: 204 VKQYPKSQKSSEALFKVGLIMQDKGQKDKAKAVYQQVLQQYPNSAGAKLAEK 255



 Score = 42.8 bits (100), Expect = 0.049,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 51/141 (36%), Gaps = 12/141 (8%)

Query: 49  DSVTDVRYQREVYEKAVL-FLKEQ---NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
            + +    +++ Y  AV   ++ +      +A        + +P +G    +      + 
Sbjct: 128 PAASSGGNEKDDYNAAVKLAMESKSKAQIDEAIGALQGFIKTYPKSGYQSNANYWLGQLN 187

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y+ G    AA      + QYP+S+      + VG+        +  D+           +
Sbjct: 188 YNKGSKDDAAFYFATVVKQYPKSQKSSEALFKVGL--------IMQDKGQKDKAKAVYQQ 239

Query: 165 IVERYTNSPYVKGARFYVTVG 185
           ++++Y NS   K A   ++  
Sbjct: 240 VLQQYPNSAGAKLAEKKLSTL 260



 Score = 39.3 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 34/113 (30%), Gaps = 22/113 (19%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
            +A    + +I  YP+S       Y +G               +      Y + +V++Y 
Sbjct: 157 DEAIGALQGFIKTYPKSGYQSNANYWLGQLNYNK--------GSKDDAAFYFATVVKQYP 208

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
            S     A F V +       K+     Y              Q VL  Y ++
Sbjct: 209 KSQKSSEALFKVGLIMQDKGQKDKAKAVY--------------QQVLQQYPNS 247


>gi|126658742|ref|ZP_01729887.1| O-linked GlcNAc transferase [Cyanothece sp. CCY0110]
 gi|126620004|gb|EAZ90728.1| O-linked GlcNAc transferase [Cyanothece sp. CCY0110]
          Length = 277

 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 72/220 (32%), Gaps = 41/220 (18%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQ 104
            LD   D  Y   +Y + V   + +++ +A E FN     +P        K+L       
Sbjct: 18  VLDDKEDTSYLA-LYHRGVTLFESESYKEALEIFNTLLETYPNEERIWFSKAL-----TL 71

Query: 105 YSAGKYQQAASLGEEYITQYPESKNV----DYVY-----YLVG-MSYAQMIR-DVPYDQR 153
           Y    Y+++    +  +   P  +       Y       Y    +SY + +  +   D+ 
Sbjct: 72  YELENYEESILAYDALLNINPIHEEAWNNRGYALSLLRRYREAILSYNKALEINPNCDKA 131

Query: 154 ATKLMLQY-----MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
              + L Y       + V  Y  S YV+          N+    ++      L+   Y  
Sbjct: 132 LFNMALAYHHLSNYQKAVNCY--SRYVEMIPDVGAAWNNR--GYDL------LRLKRYHE 181

Query: 209 AIPRFQLVLANYSDA--EHAEEAMARLVEAYVALALMDEA 246
           AI  +   +    ++      +A+A        L   +EA
Sbjct: 182 AILSYNKAIELIPNSHEPFLNKALAL-----HFLGKHEEA 216


>gi|308271574|emb|CBX28182.1| hypothetical protein N47_G35060 [uncultured Desulfobacterium sp.]
          Length = 490

 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 61/183 (33%), Gaps = 23/183 (12%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           ++   D   D   Q   Y+ A++  +  + S A  YF +   + PF       L     V
Sbjct: 307 KEDVTDKPKDYMSQ---YKYALVLSESGDRSDAIAYFKKALEENPFDP---DILRDLGKV 360

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
            +  G+Y +A    E  ++  P+            + +   I+             +   
Sbjct: 361 YFQDGQYPEAQKTLEGAVSLAPDDPET--------LLFLGRIKAET---GKFNDARKLFL 409

Query: 164 RIVERYTNSPYVKGARFYVTVG---RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
            I E+Y    Y K A + +       N +A     +G +Y  + +   A    +  L   
Sbjct: 410 TITEKYP---YYKRALYLLGETCGKMNNMADAHYYLGLFYKDKEDLKNARFHLEKALEKT 466

Query: 221 SDA 223
           +D 
Sbjct: 467 NDT 469


>gi|251770989|gb|EES51573.1| protein of unknown function [Leptospirillum ferrodiazotrophum]
          Length = 261

 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 65/199 (32%), Gaps = 51/199 (25%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDV-YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           FA TI F + V   + +   S +     D+        ++Y +           +A +  
Sbjct: 50  FAGTILFILLVGTGIVYHIHSKKVARESDAAALETKAEQLYSRGQQS-NGPELVEAKKLL 108

Query: 81  NQCSRDFPFAGVARKSLLMSAFV--------------------------------QYS-- 106
            Q    +P    AR + L  A +                                 Y   
Sbjct: 109 EQVMSTYPDTPSARVAPLFLASIINIQTPQDSSKAIEWLHRGLDLNAGNMKLLPFYYESM 168

Query: 107 ------AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
                 A +Y QA ++ ++ +T++P     D   Y +G +Y  + +        T L + 
Sbjct: 169 GLTMMSAHQYDQAIAMFQK-VTEFPGKILADAALYNIGKTYEILNQ--------TALAII 219

Query: 161 YMSRIVERYTNSPYVKGAR 179
              ++V+ + +SP+   + 
Sbjct: 220 NYKKLVKEFPSSPWAAESE 238



 Score = 43.2 bits (101), Expect = 0.044,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 45/140 (32%), Gaps = 27/140 (19%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA-------------AKEVEIGR----- 198
              + + +++  Y ++P  + A  ++    N                  ++  G      
Sbjct: 103 EAKKLLEQVMSTYPDTPSARVAPLFLASIINIQTPQDSSKAIEWLHRGLDLNAGNMKLLP 162

Query: 199 YYLKR--------GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
           +Y +          +Y  AI  FQ V   +     A+ A+  + + Y  L     A    
Sbjct: 163 FYYESMGLTMMSAHQYDQAIAMFQKVTE-FPGKILADAALYNIGKTYEILNQTALAIINY 221

Query: 251 SLIQERYPQGYWARYVETLV 270
             + + +P   WA   E  +
Sbjct: 222 KKLVKEFPSSPWAAESEPFL 241


>gi|240128293|ref|ZP_04740954.1| hypothetical protein NgonS_06586 [Neisseria gonorrhoeae SK-93-1035]
 gi|268686690|ref|ZP_06153552.1| periplasmic protein [Neisseria gonorrhoeae SK-93-1035]
 gi|268626974|gb|EEZ59374.1| periplasmic protein [Neisseria gonorrhoeae SK-93-1035]
          Length = 237

 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 43/125 (34%), Gaps = 11/125 (8%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S   V   + +Y +A+   +   FS A               +A++S+ +    +   G 
Sbjct: 111 SAHTVETAQNLYNQALKHYQNGRFSAAAALLKGADGGD-GGSIAQRSMYLLLQSRARMGN 169

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVER 168
            +    +G  Y  ++ +S     V + +G    +   +D+                +++ 
Sbjct: 170 CESVIEIGGRYANRFKDSPTAPEVVFKIGECQYRLQQKDIAR---------ATWRSLIQT 220

Query: 169 YTNSP 173
           Y  SP
Sbjct: 221 YPGSP 225


>gi|84516837|ref|ZP_01004195.1| TPR domain protein [Loktanella vestfoldensis SKA53]
 gi|84509305|gb|EAQ05764.1| TPR domain protein [Loktanella vestfoldensis SKA53]
          Length = 174

 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 28/78 (35%), Gaps = 4/78 (5%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D+  Q  + ++ +  ++  +  +A +  N      PF   A       AF  +    
Sbjct: 60  EAPDMPSQMML-DEGLRAMRGGDLIRAVDRLNALVSYCPF--YAE-GYNQRAFANFLRED 115

Query: 110 YQQAASLGEEYITQYPES 127
           YQ A    ++ I+  P  
Sbjct: 116 YQAALPDLDQAISLNPRH 133


>gi|95929293|ref|ZP_01312037.1| Tetratricopeptide TPR_2 [Desulfuromonas acetoxidans DSM 684]
 gi|95134791|gb|EAT16446.1| Tetratricopeptide TPR_2 [Desulfuromonas acetoxidans DSM 684]
          Length = 576

 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 48/278 (17%), Positives = 87/278 (31%), Gaps = 64/278 (23%)

Query: 7   RAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-YEKAV 65
           R   +F  W +   +F L     + +        + S     +     R Q  + Y  A 
Sbjct: 4   RGNTLFSFWRFVPGRFFLIGSLLLLMMTACSLPPKPSPLSVEEQQRYQRAQAYLAYADAR 63

Query: 66  LFLKEQNFSKAYEYFNQCSRDFPFAGV--------------ARKSL-------------- 97
           L L + +   A E   +       +                 +++               
Sbjct: 64  LHLIDGDVDAAIEALQRAVTFDDQSPYLFAVLASIHLDRGQTQQAQDYLNQALVLEPHHL 123

Query: 98  ---LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
              LM A V ++ GK  QA     + + ++P+ ++V    YL        I  +    +A
Sbjct: 124 ASELMLADVYHAQGKTDQAIQAFRQVLDRHPDIEDV----YLH-------ISRLYLSLQA 172

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
                Q + + ++R   S              + L    +E+   Y  RG+Y  AI  ++
Sbjct: 173 YDKAEQILLQWLKRQPQS-------------VDGL----MELANLYRLRGDYQQAITTYR 215

Query: 215 LVLANYSDAEHAEEAMARLVEAY----VALALMDEARE 248
             +            + RL+E       AL L DEA  
Sbjct: 216 QAIELTPHDRRIYLPLGRLLEQQRQFDEALTLYDEAAR 253



 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 59/169 (34%), Gaps = 22/169 (13%)

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ--- 160
              + +Y  A S+ +  I ++P    VD +YY  G+   ++       ++  +  L    
Sbjct: 405 YQRSQRYDDALSVLDRGIQRHP---KVDDLYYSQGVI-FELRGLRDRTEQLMRETLTLNP 460

Query: 161 ----YMSRIVERYTNS-PYVKGARFYVTVGRNQLAAKEV---EIGRYYLKRGEYVAAIPR 212
                ++ +   Y  S  ++  A         QLA        +G  Y + G+Y  A   
Sbjct: 461 QHVGALNHLAYIYAESGEHLDEALEMARKA-AQLAPHAAVLDTLGWVYYQLGDYEQAREP 519

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL---IQERYP 258
            +  +     +      +  L + Y  L L  EA+ +      +Q   P
Sbjct: 520 LEQAVKK---SPEDVLILEHLADLYRKLLLTQEAQRIYRKALELQPNLP 565


>gi|328952032|ref|YP_004369366.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfobacca
           acetoxidans DSM 11109]
 gi|328452356|gb|AEB08185.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfobacca
           acetoxidans DSM 11109]
          Length = 599

 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 27/250 (10%), Positives = 72/250 (28%), Gaps = 43/250 (17%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRD------VYLDSVTDVRYQREVYE---KAVLFLK 69
           +  F   +        + G +     D              ++  +E Y+    A  +L 
Sbjct: 22  IQSFKCLLLILATALVMSGCQSLPPADSARIPGKIDRLPPTIQSPKEAYKHYLNAQYYLF 81

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
             N   A   +    +  P +    +  +  A +    G  ++A +  E+ I+  P    
Sbjct: 82  TGNLEDALRSYEAAIQCDPKSA---QLEIEMAALLIRKGDIKEALAHLEKAISLDPNHLE 138

Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
                        Q++  +       +       +I+     +                 
Sbjct: 139 A-----------HQLLAGLHTGMNQLREATTEYEKIITLDPANEEAV------------- 174

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
               + +   + ++G    A+   + ++    D +    A+  L + Y+ L  +  A++ 
Sbjct: 175 ----IFLATLHAQQGNCAKAVNLLKNLIKKNPD-QFI--ALFYLGKCYIELGQLTAAKKE 227

Query: 250 VSLIQERYPQ 259
                 + P+
Sbjct: 228 FQQALHKQPE 237


>gi|212212959|ref|YP_002303895.1| tetratricopeptide repeat family protein [Coxiella burnetii
           CbuG_Q212]
 gi|212011369|gb|ACJ18750.1| tetratricopeptide repeat family protein [Coxiella burnetii
           CbuG_Q212]
          Length = 561

 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 49/182 (26%), Gaps = 49/182 (26%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A +++   +FSKA  Y+ +     P       +            ++Q+A       +  
Sbjct: 179 AHVYMYLGDFSKAITYYEKRLALEPENA---DAQYDCGLAHLKDNQFQKAIDYFTNALLL 235

Query: 124 YPESKNVDY----VYYLVG------MSYAQMIRDVPYD------------QRATKLMLQY 161
            PE  +  Y     Y   G      + Y + +   P              Q   +  + Y
Sbjct: 236 NPEHPDCHYSLATAYLQRGDHKEALLHYLRQLEKKPQIECYYNVGVLHMYQERHREAIDY 295

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
             + +    N                      + I   YLK       I + +  + +Y 
Sbjct: 296 FKQALILDPNYREA-----------------HLNIAAVYLK-------INQIKQAIEHYE 331

Query: 222 DA 223
             
Sbjct: 332 ST 333


>gi|154299087|ref|XP_001549964.1| hypothetical protein BC1G_11856 [Botryotinia fuckeliana B05.10]
 gi|150857559|gb|EDN32751.1| hypothetical protein BC1G_11856 [Botryotinia fuckeliana B05.10]
          Length = 585

 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 38/122 (31%), Gaps = 13/122 (10%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    ++++ + KA E +    +  P   +A    L  A      G +  A +  +  +
Sbjct: 61  QEGNDAMEKKQYWKAIENYTAALKCSPSVHLAEIIRLNRALAHLRNGDFDAALTDTKCMV 120

Query: 122 TQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +     ++      Y  G +   + R                 ++  ++ N+        
Sbjct: 121 SL----EDAPEKALYRAGQALYGLERFSEC--------HDIFEQLCAKFPNNAAATTGLK 168

Query: 181 YV 182
            V
Sbjct: 169 RV 170


>gi|1679748|gb|AAB62979.1| Tgl protein [Myxococcus xanthus]
          Length = 241

 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 9/67 (13%), Positives = 22/67 (32%), Gaps = 5/67 (7%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
             A + L +  +  A + +        +P   +   +     +  Y  G+  +A    + 
Sbjct: 106 NLANVHLDQGRYDDAIKLYELVLNDMLYPTPFI---AQGNLGWAYYKKGEPDRAVESIKA 162

Query: 120 YITQYPE 126
            +T  P 
Sbjct: 163 AVTTNPN 169


>gi|218768443|ref|YP_002342955.1| putative periplasmic protein [Neisseria meningitidis Z2491]
 gi|121052451|emb|CAM08787.1| putative periplasmic protein [Neisseria meningitidis Z2491]
 gi|319410687|emb|CBY91066.1| conserved hypothetical TPR-containing periplasmic protein
           [Neisseria meningitidis WUE 2594]
          Length = 238

 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 42/125 (33%), Gaps = 11/125 (8%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S   V   + +Y +A+   K   FS A               +A++S+ +    +   G 
Sbjct: 112 SAHTVETAQNLYNQALKHYKSGRFSAAASLLKGADGGD-GGSIAQRSMYLLLQSRARMGN 170

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVER 168
            +    +G  Y  ++ +S       + +G    +   +D+                +++ 
Sbjct: 171 CESVIEIGGRYANRFKDSPTAPEAMFKIGECQYRLQQKDIAR---------ATWRSLIQT 221

Query: 169 YTNSP 173
           Y  SP
Sbjct: 222 YPGSP 226



 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 18/43 (41%)

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + D+  A EAM ++ E    L   D AR     + + YP   
Sbjct: 184 RFKDSPTAPEAMFKIGECQYRLQQKDIARATWRSLIQTYPGSP 226


>gi|212213379|ref|YP_002304315.1| Tol system periplasmic component [Coxiella burnetii CbuG_Q212]
 gi|212011789|gb|ACJ19170.1| Tol system periplasmic component [Coxiella burnetii CbuG_Q212]
          Length = 305

 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 43/115 (37%), Gaps = 14/115 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                    +  Y N  YV  A +++                 YL++ +   A   FQ V
Sbjct: 193 KAQASFQNYLNDYPNGSYVANAHYWLGEI--------------YLQQKDRKNAAHEFQTV 238

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
              +  +E   +A  +L         + +A+E ++ I++++P+   A+     ++
Sbjct: 239 RDKFPKSEKVLDAKLKLAIIDAEDGKIKQAKEELTEIKKQHPESTAAQLANIRLQ 293



 Score = 43.6 bits (102), Expect = 0.027,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 34/125 (27%), Gaps = 45/125 (36%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +A+  L ++ + KA   F                        Y               
Sbjct: 179 YRQALDLLTKKQYDKAQASFQ----------------------NYLND------------ 204

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
              YP    V   +Y +G  Y Q        Q+  K        + +++  S  V  A+ 
Sbjct: 205 ---YPNGSYVANAHYWLGEIYLQ--------QKDRKNAAHEFQTVRDKFPKSEKVLDAKL 253

Query: 181 YVTVG 185
            + + 
Sbjct: 254 KLAII 258


>gi|209364238|ref|YP_001425324.2| tol system periplasmic component [Coxiella burnetii Dugway
           5J108-111]
 gi|212219429|ref|YP_002306216.1| tol system periplasmic component [Coxiella burnetii CbuK_Q154]
 gi|207082171|gb|ABS78351.2| tol system periplasmic component [Coxiella burnetii Dugway
           5J108-111]
 gi|212013691|gb|ACJ21071.1| tol system periplasmic component [Coxiella burnetii CbuK_Q154]
          Length = 305

 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 43/115 (37%), Gaps = 14/115 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                    +  Y N  YV  A +++                 YL++ +   A   FQ V
Sbjct: 193 KAQASFQNYLNDYPNGSYVANAHYWLGEI--------------YLQQKDRKNAAHEFQTV 238

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
              +  +E   +A  +L         + +A+E ++ I++++P+   A+     ++
Sbjct: 239 RDKFPKSEKVLDAKLKLAIIDAEDGKIKQAKEELTEIKKQHPESTAAQLANIRLQ 293



 Score = 43.6 bits (102), Expect = 0.027,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 34/125 (27%), Gaps = 45/125 (36%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +A+  L ++ + KA   F                        Y               
Sbjct: 179 YRQALDLLTKKQYDKAQASFQ----------------------NYLND------------ 204

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
              YP    V   +Y +G  Y Q        Q+  K        + +++  S  V  A+ 
Sbjct: 205 ---YPNGSYVANAHYWLGEIYLQ--------QKDRKNAAHEFQTVRDKFPKSEKVLDAKL 253

Query: 181 YVTVG 185
            + + 
Sbjct: 254 KLAII 258


>gi|164685794|ref|ZP_01945909.2| tol-pal system protein YbgF [Coxiella burnetii 'MSU Goat Q177']
 gi|165918370|ref|ZP_02218456.1| tol-pal system protein YbgF [Coxiella burnetii RSA 334]
 gi|164601308|gb|EAX33415.2| tol-pal system protein YbgF [Coxiella burnetii 'MSU Goat Q177']
 gi|165917876|gb|EDR36480.1| tol-pal system protein YbgF [Coxiella burnetii RSA 334]
          Length = 300

 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 43/115 (37%), Gaps = 14/115 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                    +  Y N  YV  A +++                 YL++ +   A   FQ V
Sbjct: 188 KAQASFQNYLNDYPNGSYVANAHYWLGEI--------------YLQQKDRKNAAHEFQTV 233

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
              +  +E   +A  +L         + +A+E ++ I++++P+   A+     ++
Sbjct: 234 RDKFPKSEKVLDAKLKLAIIDAEDGKIKQAKEELTEIKKQHPESTAAQLANIRLQ 288



 Score = 43.6 bits (102), Expect = 0.027,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 34/125 (27%), Gaps = 45/125 (36%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +A+  L ++ + KA   F                        Y               
Sbjct: 174 YRQALDLLTKKQYDKAQASFQ----------------------NYLND------------ 199

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
              YP    V   +Y +G  Y Q        Q+  K        + +++  S  V  A+ 
Sbjct: 200 ---YPNGSYVANAHYWLGEIYLQ--------QKDRKNAAHEFQTVRDKFPKSEKVLDAKL 248

Query: 181 YVTVG 185
            + + 
Sbjct: 249 KLAII 253


>gi|90417118|ref|ZP_01225046.1| hypothetical protein GB2207_00415 [marine gamma proteobacterium
           HTCC2207]
 gi|90331134|gb|EAS46390.1| hypothetical protein GB2207_00415 [marine gamma proteobacterium
           HTCC2207]
          Length = 299

 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 38/111 (34%), Gaps = 14/111 (12%)

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
                 ++   +R      Q   + V  Y  SPY   A +++          E+      
Sbjct: 182 NYAQASNLLLKERDINAAAQAFKQHVIDYPASPYTANAHYWLGEIYLLQGQDEM------ 235

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
                   A   F LV+  +     A +A  +L + Y  L  +D ARE++ 
Sbjct: 236 --------ARQAFTLVVEQHPKHSKAMDATFKLGKIYHQLGEIDRARELLE 278



 Score = 37.8 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 30/66 (45%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           LK  +  AA   F+  + +Y  + +   A   L E Y+     + AR+  +L+ E++P+ 
Sbjct: 191 LKERDINAAAQAFKQHVIDYPASPYTANAHYWLGEIYLLQGQDEMARQAFTLVVEQHPKH 250

Query: 261 YWARYV 266
             A   
Sbjct: 251 SKAMDA 256


>gi|19705141|ref|NP_602636.1| TPR repeat-containing protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|19713076|gb|AAL93935.1| Tetratricopeptide repeat family protein [Fusobacterium nucleatum
           subsp. nucleatum ATCC 25586]
          Length = 936

 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 67/188 (35%), Gaps = 14/188 (7%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
              +Q+  +  A  FL ++N   A + + +   +  +      S++    V Y+   Y +
Sbjct: 123 KKTFQKTFFAVAQNFLAKENNEAAQKAYKEIIDN-KYENYKE-SMMGLGIVYYNLKDYDK 180

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A     E+  + P+ +N + V YL   +  +           T   +     +     ++
Sbjct: 181 AIYWLSEFSKEMPK-ENKEMVSYLRASALYRK--------GNTDEAIGRFEELANVEPST 231

Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN-YSDAEHAEEAMA 231
            Y + A  Y+    +    K+     +YL R +          ++ + Y   E+  +A+ 
Sbjct: 232 EYSRKAALYLIEIYSN--RKDEAKVTFYLNRIKGTKEYNTAMTMIGDLYVTKENYNKALD 289

Query: 232 RLVEAYVA 239
              ++   
Sbjct: 290 YYSQSNDK 297



 Score = 40.1 bits (93), Expect = 0.29,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 67/204 (32%), Gaps = 29/204 (14%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y K +  +    + +A   F +       + ++ K  L      + A +Y +A   GE+Y
Sbjct: 508 YLKGIAAMGLGKYDEAESEFQKVLASGDQS-LSTKVYLNRVRNYFLAERYNEAVQAGEQY 566

Query: 121 I-TQYPESKNVDYVYYL--VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           +    P+ + V Y   L  +G+SY ++ +   YDQ                   S Y K 
Sbjct: 567 LSKLSPDKEKVIYSEMLDKIGLSYFRLGK---YDQAR-----------------SYYSKI 606

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           A         +      +I   Y     Y  A   ++ V   + +  + E+A  + +   
Sbjct: 607 ASMKGYEVYGK-----FQIADSYYNEKNYEKAGSLYKEVYNQFGETFYGEQAYYKYIMTL 661

Query: 238 VALALMDEAREVVSLIQERYPQGY 261
                 D          + YP   
Sbjct: 662 SLTGNTDAFEREKDNFMKVYPNSN 685


>gi|108762653|ref|YP_631287.1| social gliding motility protein Tgl [Myxococcus xanthus DK 1622]
 gi|108466533|gb|ABF91718.1| social gliding motility protein Tgl [Myxococcus xanthus DK 1622]
          Length = 253

 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 10/67 (14%), Positives = 22/67 (32%), Gaps = 5/67 (7%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
             A + L +  +  A + +        +P   +A        +  Y  G+  +A    + 
Sbjct: 106 NLANVHLDQGRYDDAIKLYELVLNDMLYPTPFIA---QGNLGWAYYKKGEPDRAVESIKA 162

Query: 120 YITQYPE 126
            +T  P 
Sbjct: 163 AVTTNPN 169


>gi|326430815|gb|EGD76385.1| tetratricopeptide protein [Salpingoeca sp. ATCC 50818]
          Length = 809

 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 71/227 (31%), Gaps = 64/227 (28%)

Query: 69  KEQNFSKAYEYFNQ--------CSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGE 118
            + ++ +A E F +             P   +              YS G Y +A +  E
Sbjct: 366 DKGDYDRAIECFEKALAIYVEMLGEKHPSTASTYN-----NLGSAYYSKGDYDKAIAFYE 420

Query: 119 EYITQ--------YPESKNVDYVYYL-VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           + +          +P + +     YL +G++Y     +    Q   K +   +  + E++
Sbjct: 421 KDLAITVETLGEKHPGTADS----YLGLGVAYYSKSENDEAIQLYEKALAIKVETLGEKH 476

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL--------ANYS 221
            ++              N L       G  Y  +GEY  AI  ++  L          + 
Sbjct: 477 PST----------AETYNNL-------GNTYYSKGEYDKAIQLYEKALAITVETLGEKHP 519

Query: 222 DAEHAEEAMARLVEAYVALALMDEA----REVVSL----IQERYPQG 260
                      L  AY      D+A     + +++    + E++P  
Sbjct: 520 STADTY---NNLGNAYSDKGEYDKAIVFYEKALAIKVETLGEKHPST 563



 Score = 40.5 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 32/235 (13%), Positives = 62/235 (26%), Gaps = 63/235 (26%)

Query: 61  YEK-AVLFLKEQNFSKAYEYFNQ--------CSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           Y      +  + ++ KA  ++ +             P       S L      YS  +  
Sbjct: 399 YNNLGSAYYSKGDYDKAIAFYEKDLAITVETLGEKHPGTA---DSYLGLGVAYYSKSEND 455

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           +A                     Y   ++    I+     ++       Y +     Y+ 
Sbjct: 456 EAIQ------------------LYEKALA----IKVETLGEKHPSTAETYNNLGNTYYSK 493

Query: 172 SPYVKGARFY---VTVGRNQLAAKEVEIGRYYLK-------RGEYVAAIPRFQLVL---- 217
             Y K  + Y   + +    L  K       Y         +GEY  AI  ++  L    
Sbjct: 494 GEYDKAIQLYEKALAITVETLGEKHPSTADTYNNLGNAYSDKGEYDKAIVFYEKALAIKV 553

Query: 218 ----ANYSDAEHAEEAMARLVEAYVALALMDEA----REVVSL----IQERYPQG 260
                 +            L  AY      D+A       +++    + E++P  
Sbjct: 554 ETLGEKHPSTASTH---NNLGTAYADKGDYDKAIQHHETALAIRVETLGEKHPHT 605


>gi|300120392|emb|CBK19946.2| unnamed protein product [Blastocystis hominis]
          Length = 429

 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 17/122 (13%), Positives = 44/122 (36%), Gaps = 10/122 (8%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
             A  F++ ++++KA   +       P A  + +     A+  Y    Y++A    +  +
Sbjct: 173 AAAFYFIQSRDYAKAINAYQMALLYHPDAPASVRV--GIAYCFYKQNNYKKAFLALDRAL 230

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              P ++          ++    ++    D    + ++  +  I + Y  +P    A  Y
Sbjct: 231 QLDPANEE--------ALAMKAALQRTAADLSPKERVIASLQTIQQLYRVNPNHPQALNY 282

Query: 182 VT 183
           + 
Sbjct: 283 IA 284


>gi|294656841|ref|XP_002770320.1| DEHA2D15576p [Debaryomyces hansenii CBS767]
 gi|199431783|emb|CAR65674.1| DEHA2D15576p [Debaryomyces hansenii]
          Length = 532

 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 40/121 (33%), Gaps = 18/121 (14%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKY 110
           +     ++ ++   +LKE  ++ A + + +     P      + ++ +           Y
Sbjct: 4   NKEEAIKLKDEGNAYLKEHRYNYAIDSYTKAIELDPTNAVFYSNRAQV-----HIKLENY 58

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A S   E +       N+   YY  G+S   ++          K        I+++  
Sbjct: 59  GLAISDCNEALKV---DPNMMKAYYRRGISLMAILN--------YKEAQINFKEILKKMP 107

Query: 171 N 171
           N
Sbjct: 108 N 108


>gi|150400578|ref|YP_001324344.1| TPR repeat-containing protein [Methanococcus aeolicus Nankai-3]
 gi|150013281|gb|ABR55732.1| TPR repeat-containing protein [Methanococcus aeolicus Nankai-3]
          Length = 470

 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +K   +  ++++ KA EY+N+  +++P+     +  +      Y    Y +A    +E
Sbjct: 8   KKGNEYKDKEDYDKAIEYYNEALKNYPY-KFKWRIFINLGHCYYLKKDYDEAIKNYKE 64


>gi|194333978|ref|YP_002015838.1| TPR repeat-containing protein [Prosthecochloris aestuarii DSM 271]
 gi|194311796|gb|ACF46191.1| TPR repeat-containing protein [Prosthecochloris aestuarii DSM 271]
          Length = 205

 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 42/116 (36%), Gaps = 18/116 (15%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLG 117
            Y+K +   +E ++S A   F++     P        + L+ +       G    A +  
Sbjct: 56  YYKKGLRKSREGDYSAAATLFSRALDFHPGHTNAYFSRGLIRT-----RRGDNPGALADY 110

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
              I  YP   +V  VY   GM     +R    DQ      LQ  ++ +E    +P
Sbjct: 111 SRVIELYP---DVSMVYNNRGM-----VRKKTGDQNG---ALQDFNKAIELDPANP 155


>gi|229526204|ref|ZP_04415608.1| TPR domain protein in aerotolerance operon [Vibrio cholerae bv.
           albensis VL426]
 gi|229336362|gb|EEO01380.1| TPR domain protein in aerotolerance operon [Vibrio cholerae bv.
           albensis VL426]
          Length = 632

 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 14/133 (10%)

Query: 4   VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63
           +L  A+C+F         F+L + F +++     W    S  +  D      +  E Y +
Sbjct: 309 LLIAALCLFRRGVI----FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMRMFNNEQYAQ 361

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLG 117
           A    ++ ++  A  Y+ +          ++ +          A     AG+ Q+A  L 
Sbjct: 362 AAEAFRDPHWQGAARYYAK-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLY 420

Query: 118 EEYITQYPESKNV 130
           E  + Q P  ++ 
Sbjct: 421 EHVLKQEPNHQDA 433


>gi|328772217|gb|EGF82256.1| hypothetical protein BATDEDRAFT_19105 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 645

 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 50/136 (36%), Gaps = 16/136 (11%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y +  +     ++  A + ++     + P    +    +  A  +Y  G Y ++    +E
Sbjct: 443 YHRGQVRFLTADYQGAVDDYSASIKNESP-EESSVYVHIQMAVAKYKLGNYAESEKKFKE 501

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS--PYVKG 177
               +P S  V                ++  D++A    L+  ++ +E    S  PY+  
Sbjct: 502 CKRLFPNSAEV-----------FNYYGEIHMDRQAHTEALKAFNKSIEMDPTSPLPYINK 550

Query: 178 ARFYVTVGRNQLAAKE 193
           A  Y+   ++ LA  E
Sbjct: 551 AILYLNWKQD-LATAE 565


>gi|323344856|ref|ZP_08085080.1| hypothetical protein HMPREF0663_11616 [Prevotella oralis ATCC
           33269]
 gi|323094126|gb|EFZ36703.1| hypothetical protein HMPREF0663_11616 [Prevotella oralis ATCC
           33269]
          Length = 1147

 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 23/50 (46%)

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
            + +  +Y D EH + A   L   Y  L +   A   +  ++++YP+  W
Sbjct: 618 LRRLTESYPDYEHTDNAYYHLFLLYSRLNMPSLAESYIQKLRQQYPKSEW 667


>gi|190893273|ref|YP_001979815.1| hypothetical protein RHECIAT_CH0003699 [Rhizobium etli CIAT 652]
 gi|190698552|gb|ACE92637.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
          Length = 329

 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 37/104 (35%), Gaps = 14/104 (13%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
             Q  ++ +  Y +S     A F++                    +G+Y  A   F    
Sbjct: 224 AEQEFNQYIAHYPSSARAADANFWLGEAL--------------YSQGKYNEAAKTFLNAH 269

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             Y  +E A E + +L  +  AL   + A   +  + +RYP+  
Sbjct: 270 QKYGSSEKAPEMLLKLGMSLAALDNKETACATLREVSKRYPKAS 313



 Score = 44.3 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 42/114 (36%), Gaps = 14/114 (12%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A   +   ++  A + FNQ    +P +  A  +        YS GKY +A    + +
Sbjct: 209 YKAAYGHVLSGDYGTAEQEFNQYIAHYPSSARAADANFWLGEALYSQGKYNEA---AKTF 265

Query: 121 ITQYP---ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           +  +     S+    +   +GMS A +           +     +  + +RY  
Sbjct: 266 LNAHQKYGSSEKAPEMLLKLGMSLAALDNK--------ETACATLREVSKRYPK 311


>gi|158521141|ref|YP_001529011.1| N-acetylmuramoyl-L-alanine amidase [Desulfococcus oleovorans Hxd3]
 gi|158509967|gb|ABW66934.1| N-acetylmuramoyl-L-alanine amidase [Desulfococcus oleovorans Hxd3]
          Length = 667

 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 25/72 (34%), Gaps = 4/72 (5%)

Query: 117 GEEYITQYPESKNVDYV---YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
              ++  Y +     +     Y  G+ Y +M +         +      +RIV R+ +S 
Sbjct: 61  INAFLDVYEQDPAGPWAAAGLYRAGLLYTEMYKHSYRS-ADLQEAADLFNRIVHRFPDSA 119

Query: 174 YVKGARFYVTVG 185
           Y   A+  +   
Sbjct: 120 YSARAKEQLAGL 131


>gi|113461116|ref|YP_719184.1| tetratricopeptide repeat protein [Haemophilus somnus 129PT]
 gi|112823159|gb|ABI25248.1| conserved hypothetical protein [Haemophilus somnus 129PT]
          Length = 398

 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 71/200 (35%), Gaps = 30/200 (15%)

Query: 48  LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           LDS ++  +++++  K   A  FL    + +A   +     +      A  +L   A + 
Sbjct: 103 LDSSSNYTFEQKLLAKQQLAKDFLTIGFYDRAENLYILLIDE---PNYAENALQQLAVIY 159

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
               ++++A ++ E+     P   N+   +Y     Y +    +  D++     +  + +
Sbjct: 160 QKTKEWKKAINVAEKLAKISPTEDNIALAHY-----YCEYSLTLGSDEQQQAQAIHILQQ 214

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
            +     S                     + I   Y+   EY  A+   + VL    +A+
Sbjct: 215 ALNVSKTSVRAS-----------------ILIAERYIVNLEYQRAVQHLENVL--IQNAD 255

Query: 225 HAEEAMARLVEAYVALALMD 244
           +  E +  L   Y  L  +D
Sbjct: 256 YMSEILPALKYCYQELNRLD 275


>gi|258405687|ref|YP_003198429.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfohalobium
           retbaense DSM 5692]
 gi|257797914|gb|ACV68851.1| Tetratricopeptide TPR_2 repeat protein [Desulfohalobium retbaense
           DSM 5692]
          Length = 339

 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 41/130 (31%), Gaps = 28/130 (21%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGAR--------FYVTVGRNQLAAKE---------- 193
           Q      L  + + VE      Y   A           +   + +LA  E          
Sbjct: 81  QEHPSKALPALQKAVELKP--QYA-DAHFWLGVAHWAMMDFEKERLA-YERALALEPDHT 136

Query: 194 ---VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
              V +G +Y+ R ++  A+  ++ VL           A+    E    L     AR+  
Sbjct: 137 QARVYLGHHYVDREQWSLALIHYRRVLDEEPGHPS---ALFYTAECLEQLGREQSARQAW 193

Query: 251 SLIQERYPQG 260
               +RYP G
Sbjct: 194 KAYLDRYPDG 203


>gi|332290666|ref|YP_004429275.1| Tetratricopeptide TPR_1 repeat-containing protein [Krokinobacter
           diaphorus 4H-3-7-5]
 gi|332168752|gb|AEE18007.1| Tetratricopeptide TPR_1 repeat-containing protein [Krokinobacter
           diaphorus 4H-3-7-5]
          Length = 1006

 Score = 44.3 bits (104), Expect = 0.015,   Method: Composition-based stats.
 Identities = 45/246 (18%), Positives = 83/246 (33%), Gaps = 56/246 (22%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                    +YE   +++ +    +A   +++  RD P +    K++L  A +  +  K 
Sbjct: 606 PNSTYRDDALYELGNIYVSQNKNDQAITAYDKLVRDLPGSSYVSKAMLKKALILDNKNKS 665

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------------------RDV 148
            +A +L  +    YP +        L  ++ A++I                       D 
Sbjct: 666 DEALALLRKVAGDYPGTPEA-----LQAVTTAKLIYIDLGRVDEYGQWVSTLDFIDVEDA 720

Query: 149 PYDQRA------------TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
             D  A                 +     +  Y N  +   A FY+     QLA      
Sbjct: 721 ELDDAAYASAEKQYVENNVGQAERLFESYLSDYPNGQHALQAHFYL----GQLA------ 770

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI--Q 254
                 + EY   IP +Q V+     +E  E+A+ARL + Y+       A  V+  +  +
Sbjct: 771 ----FAKAEYKKTIPHYQFVITK-ERSEFTEQALARLGQVYLTDKNYTAAIPVLKRLETE 825

Query: 255 ERYPQG 260
             +PQ 
Sbjct: 826 ADFPQN 831



 Score = 40.9 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 59/194 (30%), Gaps = 30/194 (15%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              +  ++ +++A  Y                      +  Y  G Y  A +   + I  
Sbjct: 252 GESYFNQKRYAEALPYLQAYKGKR--GKWNNTDYYQLGYTYYKQGDYANAINEFNKIID- 308

Query: 124 YPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
              + +V    YY +  SY ++ +         +  L       E   N+   + +    
Sbjct: 309 --GNNSVAQNGYYHLAESYLKLDKK--------QEALNAFKNASEMDFNAQIKEDSGLNY 358

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
                  A    EIG  Y       A I  +   +  Y  +    E  A L+++Y+    
Sbjct: 359 -------AKLSYEIGNAY---KSTPAVITDY---IDTYPKSPAKPELEALLIDSYIT--- 402

Query: 243 MDEAREVVSLIQER 256
               +E + L++  
Sbjct: 403 SKNYKEAMRLLESN 416



 Score = 39.3 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 76/239 (31%), Gaps = 60/239 (25%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           Y KA       +F +A   + Q   + +       +      A+  +S  +Y+QAA++ E
Sbjct: 467 YWKAESDYVANDFKEAIIGYKQFLNNSNAANTPEYQDINYNLAYAYFSDKQYEQAATVFE 526

Query: 119 -----------------------EYIT------QYPESKNV-------DYVYYLVGMSYA 142
                                   +I+          +K++       DY  +   MSY 
Sbjct: 527 SYTASNVQDQSKLNDAYLRLGDSRFISSKYWPALEAYNKSIALNMTDQDYATFQKSMSYG 586

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
            + +D           +  +     ++ NS Y   A              E+  G  Y+ 
Sbjct: 587 FIKKDEDK--------ISGLQTFSTKFPNSTYRDDAL------------YEL--GNIYVS 624

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           + +   AI  +  ++ +   + +  +AM +           DEA  ++  +   YP   
Sbjct: 625 QNKNDQAITAYDKLVRDLPGSSYVSKAMLKKALILDNKNKSDEALALLRKVAGDYPGTP 683



 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 80/217 (36%), Gaps = 16/217 (7%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
           V   ++T    +   +     + K   F +A +Y N+            ++     F+ Y
Sbjct: 128 VDESTLTAGEKETFYFNNGYAYFKSNRFDEAKKYLNRVRDS---KKYGTQAKYYIGFMAY 184

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM------L 159
              +Y++A  L EE   +   + N D  Y+   +++     D    +  ++L        
Sbjct: 185 EGDEYEEANELFEEVEAETGGAYNEDLAYFKADLNFKLGKFDEAISEGKSQLAKANPTEK 244

Query: 160 QYMSRIV-ERYTNSPYVKGARFYVTVGRNQLAAKE----VEIGRYYLKRGEYVAAIPRFQ 214
             +++I+ E Y N      A  Y+   + +          ++G  Y K+G+Y  AI  F 
Sbjct: 245 SELNKIIGESYFNQKRYAEALPYLQAYKGKRGKWNNTDYYQLGYTYYKQGDYANAINEFN 304

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
            ++    +   A+     L E+Y+ L    EA     
Sbjct: 305 KIIDG--NNSVAQNGYYHLAESYLKLDKKQEALNAFK 339


>gi|296203513|ref|XP_002748928.1| PREDICTED: intraflagellar transport protein 88 homolog [Callithrix
           jacchus]
          Length = 786

 Score = 44.3 bits (104), Expect = 0.015,   Method: Composition-based stats.
 Identities = 31/233 (13%), Positives = 77/233 (33%), Gaps = 22/233 (9%)

Query: 7   RAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREVYEKAV 65
           +A+ I +    +  +       +++  + +G +  Q+S    +   +D      +  K  
Sbjct: 433 QAVEILKMLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAALTNKGN 492

Query: 66  LFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
                 ++ KA E++      D   +     +L           +  +A      ++  +
Sbjct: 493 TVFANGDYEKAAEFYKEALRND---SSCTE-ALYNVGLTYEKMNRLDEALDC---FLKLH 545

Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
              +N   V Y +   Y  M              ++++ ++V     +P        +  
Sbjct: 546 AILRNSAEVLYQIANIYELM--------ENLSEAIEWLMQVVSVVPTNP---QVLAKLGE 594

Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAA-IPRFQLVLANYSDAEHAEEAMARLVEA 236
             ++   K  +  +YY +   Y    I   + + A Y D +  E+A+     A
Sbjct: 595 LYDREGDKS-QAFQYYYESYRYFPCNIEVVEWLGAYYIDTQFWEKAIQYFERA 646



 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 66/222 (29%), Gaps = 67/222 (30%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117
            KAV +L+++++++A E      +    + V   +    + + Y    + QA+S      
Sbjct: 420 NKAVTYLRQRDYNQAVEILKMLEKKD--SRVKSAAATNLSALYYMGKDFAQASSYADIAV 477

Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147
             + Y    P    +K      N DY                     Y VG++Y +M R 
Sbjct: 478 NSDRY---NPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNVGLTYEKMNR- 533

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
                      L    ++     NS                 A    +I   Y       
Sbjct: 534 -------LDEALDCFLKLHAILRNS-----------------AEVLYQIANIYELMENLS 569

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
            AI     V++           +A+L E Y       +A + 
Sbjct: 570 EAIEWLMQVVSVVPTNPQV---LAKLGELYDREGDKSQAFQY 608


>gi|254414040|ref|ZP_05027808.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
 gi|196179176|gb|EDX74172.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
          Length = 481

 Score = 44.3 bits (104), Expect = 0.015,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 60/187 (32%), Gaps = 42/187 (22%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ-YSAG--- 108
           +  Y    Y +AV+  +  + + A                 +   + S+F   Y+     
Sbjct: 317 NSSYADAYYNRAVVRSQSGDQAGAIA------------DYTQAIRIDSSFAAAYNNRGLA 364

Query: 109 --KYQQAASLGEEY---ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
               +      E++   +   P   N    YY  G++Y+++  D        +  +   +
Sbjct: 365 RSDLEDQQGAIEDFSQALRINPGKANT---YYNRGLAYSRLRDD--------RRAIADYT 413

Query: 164 RIVERYTNSPYVKG------ARFYVTVGRNQLAAKEVEIGRYYL--KRGEYVAAIPRFQL 215
             +    NS Y K       A   +    + +A  +     +    +  +Y  A+ R + 
Sbjct: 414 EAIRL--NSNYAKAYGNRGLAFARLGELHSAIADLQQAAQLFRAQGRMEDYHKALDRIRQ 471

Query: 216 VLANYSD 222
           + + +  
Sbjct: 472 IQSQFPQ 478


>gi|218781560|ref|YP_002432878.1| hypothetical protein Dalk_3723 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218762944|gb|ACL05410.1| hypothetical protein Dalk_3723 [Desulfatibacillum alkenivorans
           AK-01]
          Length = 477

 Score = 44.3 bits (104), Expect = 0.015,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 33/92 (35%), Gaps = 7/92 (7%)

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
            K+LL  A      G  + A S   ++   YP++++V   Y+     +   + +      
Sbjct: 391 PKALLKIAGWLAETGNPKIAISAYNKFAKSYPDNRDVPLAYFRAAQIFHDRLMNQD---- 446

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
                   +  I++++ +       + Y+   
Sbjct: 447 ---KAKGLLKGILKKFPDHAIAPKVKNYLQYI 475


>gi|124008152|ref|ZP_01692850.1| O-linked GlcNAc transferase [Microscilla marina ATCC 23134]
 gi|123986400|gb|EAY26213.1| O-linked GlcNAc transferase [Microscilla marina ATCC 23134]
          Length = 425

 Score = 44.3 bits (104), Expect = 0.015,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 88/238 (36%), Gaps = 48/238 (20%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQ 111
           + ++++  Y     ++  + + KA   + +     P F        L   +       Y+
Sbjct: 196 NDKFEKAWYNLGATYVDLKQYEKAIPCYEKAIDIKPDFDSW---YSLGLTYTDMKI--YE 250

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           +A    E+ I   PE++     +Y++G++Y+ + +         +  + Y  + +E   N
Sbjct: 251 KAIYCFEKAIEINPETEL----WYILGVTYSNLQKH--------EEAIPYYKKSLEINPN 298

Query: 172 SPYVKGARFYVTVG-----RNQLAAKEVEIG---RY----------YLKRGEYVAAIPRF 213
           +P V      +T       R+ L   E  +G    +          Y+  GEY  +IP F
Sbjct: 299 NPLVWY-NLGITYANLGRDRDALPCFEKAVGLNPEFDLVWYNLGIIYINLGEYEKSIPCF 357

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQGYWARYVET 268
           Q V+    +    ++A+  +  AY  +   D+  E +    ++        W R    
Sbjct: 358 QRVVEEKPN---FDKALYNIARAYNFMKNRDKTLEYLKKFVVL-----NSKWKRNAYK 407


>gi|91203640|emb|CAJ71293.1| hypothetical protein kustc0548 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 722

 Score = 44.3 bits (104), Expect = 0.015,   Method: Composition-based stats.
 Identities = 21/165 (12%), Positives = 44/165 (26%), Gaps = 40/165 (24%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEK---------AVLFLKEQNFSKAYEYFNQ---CS 84
           G     +    LD   +   +  +Y+           V + K      A EYF +    +
Sbjct: 539 GLGSVYNSMEKLDEALEEFRESLLYDSKYILAINNVGVNYAKRGKMHDAIEYFEKAVALN 598

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY----YLVGMS 140
           ++ P +           F   +  + ++A       +   P++ N         Y +GM 
Sbjct: 599 QNQPQSYY------NLGFAYENLEEGERAVQAYRRAVQLDPDNFNALLALGNLCYRMGM- 651

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
                             +     ++ RY        A   +   
Sbjct: 652 --------------ADDAINVFQHMIVRYPG---EVNAYKRLVFL 679


>gi|332260278|ref|XP_003279214.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 3
           [Nomascus leucogenys]
          Length = 804

 Score = 44.3 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 35/299 (11%), Positives = 88/299 (29%), Gaps = 56/299 (18%)

Query: 2   SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60
                +A+ I +    +  +       +++  + +G +  Q+S    +   +D      +
Sbjct: 409 QKDYNQAVEILKMLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 468

Query: 61  YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
             K        ++ KA E++      D   +     +L           +  +A      
Sbjct: 469 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 521

Query: 120 YITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKL--------- 157
           ++  +   +N   V Y +   Y              Q++  +P D +             
Sbjct: 522 FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREG 581

Query: 158 ----MLQYMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEI 196
                 QY       +               ++ + + A  Y     + +      ++ +
Sbjct: 582 DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMV 641

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
              + + G Y  A+  ++     + +     E +  LV     L L D A+E    ++ 
Sbjct: 642 ASCFRRSGNYQKALDTYKDTHRKFPE---NVECLRFLVRLCTDLGLKD-AQEYAIKLKR 696



 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 66/222 (29%), Gaps = 67/222 (30%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117
            KAV +L+++++++A E      +    + V   +    + + Y    + QA+S      
Sbjct: 401 NKAVTYLRQKDYNQAVEILKMLEKKD--SRVKSAAATNLSALYYMGKDFAQASSYADIAV 458

Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147
             + Y    P    +K      N DY                     Y +G++Y ++ R 
Sbjct: 459 NSDRY---NPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNR- 514

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
                      L    ++     NS                 A    +I   Y       
Sbjct: 515 -------LDEALDCFLKLHAILRNS-----------------AEVLYQIANIYELMENPS 550

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
            AI     V++           +++L E Y       +A + 
Sbjct: 551 QAIEWLMQVVSVIPTDPQV---LSKLGELYDREGDKSQAFQY 589


>gi|17228607|ref|NP_485155.1| hypothetical protein alr1112 [Nostoc sp. PCC 7120]
 gi|17130458|dbj|BAB73069.1| alr1112 [Nostoc sp. PCC 7120]
          Length = 731

 Score = 44.3 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 75/217 (34%), Gaps = 28/217 (12%)

Query: 55  RYQREVYEKAVL-FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
           +  R +Y  A    +  +N  +A   + Q  + FP A      L+  A     A   + A
Sbjct: 259 KTARNLYRTARGWQVGGKNREQAISTYKQLVQQFPDARETGLGLVRLAE---MAKSNKDA 315

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
                + I ++PE  +         +     I     D++A +   Q   +++ +Y  S 
Sbjct: 316 LPYLNQVIAKFPEQAS-------QALVKKAEILTALKDEKAAQQTWQ---QLITKYAKS- 364

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
                        N+ A    +I     K  +Y +A    Q ++ N  ++  A  A   L
Sbjct: 365 -------------NEAAEYRWKIALEKAKARDYTSAWKWAQPIVVNNPNSILAPRAGFWL 411

Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
                 L    EA+     +  ++P  Y+A     L+
Sbjct: 412 GRWAATLGKQQEAQTAYEYVISQFPYSYYAWRSANLL 448


>gi|260172393|ref|ZP_05758805.1| TPR domain-containing protein [Bacteroides sp. D2]
 gi|315920689|ref|ZP_07916929.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313694564|gb|EFS31399.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 590

 Score = 44.3 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 63/198 (31%), Gaps = 36/198 (18%)

Query: 61  YEKAVLFL--KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           Y + ++ L  ++    KA     +    FP       SLL          KY    S   
Sbjct: 122 YSQGLVSLYQQQNELDKAVTLLEKMVTRFPSKQEPLFSLLDI---YSRQEKYNDVISTLN 178

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
               +  +++ +    + +   Y QM  D        K   Q +  +V+ Y         
Sbjct: 179 RLEKRLGKNEQLSMEKFRI---YLQMKDD--------KKAFQEIESLVQEYP-------- 219

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
              + +        +V +G  YL+ G+   A   +Q VLA   D      A+  +   Y 
Sbjct: 220 ---MDM------RYQVILGDVYLQNGKKQEAYDAYQKVLAVEPD---NPMALFSMASYYE 267

Query: 239 ALALMDEAREVVSLIQER 256
                +  ++ +  +   
Sbjct: 268 QTGQKELYQQQLDTLLLN 285


>gi|320450982|ref|YP_004203078.1| tetratricopeptide repeat-containing protein [Thermus scotoductus
           SA-01]
 gi|320151151|gb|ADW22529.1| tetratricopeptide TPR_2 [Thermus scotoductus SA-01]
          Length = 450

 Score = 44.3 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 5/66 (7%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           ++E AV  L +  + +A EY         +P      ++L   A   Y  G+YQ+A  + 
Sbjct: 286 LHEMAVAALDQGAYLEAEEYLEALLREEGYP---YRAQALADLAEALYRQGRYQEAEEMA 342

Query: 118 EEYITQ 123
              + Q
Sbjct: 343 HRAMRQ 348


>gi|296234173|ref|XP_002762303.1| PREDICTED: serine/threonine-protein phosphatase 5 isoform 2
           [Callithrix jacchus]
          Length = 486

 Score = 44.3 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 53/166 (31%), Gaps = 32/166 (19%)

Query: 32  VCFLVGWERQSSRDVYLDSVTD--VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
           +    G   + +     +  TD  ++   E+  +A  + K +++  A ++++Q     P 
Sbjct: 1   MAMAEGERTECAEPPRDEPPTDGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS 60

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
                     + +  Y+ G   +A  L ++YI            YY    S   +     
Sbjct: 61  ---------NAIYYGYALGDATRAIELDKKYIK----------GYYRRAASNMAL----- 96

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
                 +  L+    +V+   +      A+         +  K  E
Sbjct: 97  ---GKFRAALRDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 136


>gi|291572031|dbj|BAI94303.1| TPR domain protein [Arthrospira platensis NIES-39]
          Length = 265

 Score = 44.3 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 72/226 (31%), Gaps = 64/226 (28%)

Query: 56  YQREVYEKAVLFLKEQN-FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY-------SA 107
           Y    Y + V+  K  N  ++A   F Q  R  P                Y         
Sbjct: 75  YALAYYNRGVVRFKSGNNLTEAIADFTQAIRLNP----------EYVDAYYNRAIARVKV 124

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +Y  A     + I   P     D  +YL G+ Y++ ++D        +  +   +  + 
Sbjct: 125 QQYWPAIDDITQVIRLDPSH---DRAFYLRGLIYSENLKDY-------QTGINDFTEAIR 174

Query: 168 RYTNS--PYVKGARFYVTVGRNQLAAKEVEIGRY-------------YLKRGEYVAAIPR 212
               +  PY K           ++  +E  I  Y             Y  R     AI R
Sbjct: 175 LNPGNPAPYFKRGNARY-----RIGDRERAIDDYNKAIEINPSDPEPYYNR-----AISR 224

Query: 213 FQLVLANYSDAEHAEEAMARLVEA---YVALALMDEAREVVSLIQE 255
           +Q  + +         A+  L ++   Y+ L   ++ ++ +  +++
Sbjct: 225 YQ--IGDRQG------AIFDLQKSADLYMDLGNFEKYQKAIDTLEK 262


>gi|254409568|ref|ZP_05023349.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
 gi|196183565|gb|EDX78548.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
          Length = 861

 Score = 44.3 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 17/140 (12%), Positives = 49/140 (35%), Gaps = 21/140 (15%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEE 119
            +      + ++ +A   ++Q     P       ++         +   +YQ A +  + 
Sbjct: 570 NQGDNLFAQGDYEEAIARYDQALELQPDNANLWHQR-----GVALWELQRYQDAIASLDR 624

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +   PE+ +    +Y  G++          + +  +  L   +++++   +  Y     
Sbjct: 625 GLELAPEAPDT---WYYRGLAL--------RELQRYEGALVAFNKVIQIQPD-DYKAWLN 672

Query: 180 FYVTVGRNQLAAKEVEIGRY 199
             + +GR  L  +E  I  +
Sbjct: 673 RGMMLGR--LKRREDAIASF 690



 Score = 35.5 bits (81), Expect = 7.5,   Method: Composition-based stats.
 Identities = 15/116 (12%), Positives = 45/116 (38%), Gaps = 14/116 (12%)

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           E   + +++ P   +  K  +      ++ G Y++A +  ++ +   P++ N+   ++  
Sbjct: 549 EQLERLNQNHPEFFLNVKDYINQGDNLFAQGDYEEAIARYDQALELQPDNANL---WHQR 605

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
           G++  ++ R         +  +  + R +E            +Y  +   +L   E
Sbjct: 606 GVALWELQR--------YQDAIASLDRGLELAPE---APDTWYYRGLALRELQRYE 650


>gi|78222447|ref|YP_384194.1| intermediate filament protein [Geobacter metallireducens GS-15]
 gi|78193702|gb|ABB31469.1| Intermediate filament protein [Geobacter metallireducens GS-15]
          Length = 573

 Score = 44.3 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 69/220 (31%), Gaps = 63/220 (28%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
            +++++ + + +A   F Q     P    A +     A       ++ +A    EE+   
Sbjct: 291 GLIYMELERYDEAIAEFEQILAREP---KAHQIRFYIASAYEEKEEFDKAI---EEFSKI 344

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN------------ 171
            P + N     Y+  + +   I  +  DQ   +  +Q ++  +    +            
Sbjct: 345 PPGTAN-----YVEALGH---IAFMYRDQEKPEKGIQILTDAITANPDKLDLYLYLAGLY 396

Query: 172 -----------------SPYVKGARF--YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
                              + +  R    +    +++  KE  I R  +KR   V AI  
Sbjct: 397 ESMDKFSEGLAVLKGVEGKFAEDPRLHFRMGTILDKMGNKEESIAR--MKR---VIAI-- 449

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALM-DEAREVVS 251
                          +A+  L   Y  + +  DEA + + 
Sbjct: 450 ----------TPDDAQALNYLGYTYAEMGIKLDEALQYLK 479



 Score = 38.6 bits (89), Expect = 0.97,   Method: Composition-based stats.
 Identities = 33/239 (13%), Positives = 71/239 (29%), Gaps = 42/239 (17%)

Query: 21  KFALTIFFSIAVCFLVGWERQ------SSRDVYLDSVTDVRYQREVYEKAVLFLK--EQN 72
           K  + +   +A+ FL G           + +       ++   R +Y  ++  L+  + +
Sbjct: 2   KKRIVVALFLALSFLPGCATNGAGKPLPANEHSFQPTVNIAGSRALYIYSLSRLRELDGD 61

Query: 73  FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
           F  A    N      P +     +          +GK   A    E  I   P  +    
Sbjct: 62  FEGALTLLNGAIEADPNSAFLHTAAAEI---YLKSGKLDDALRACENAIRVDPGFRP--- 115

Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
              + G   A + RD        K  + ++S+ +E                         
Sbjct: 116 ARIIAGTILANLKRD--------KEAIVHLSKAIELDPTKEDAY---------------- 151

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
            + +   Y++  +Y  A+   + ++    ++         L + Y  + L  EA     
Sbjct: 152 -LHLAISYVRTFDYEQAVNTLKSLIKINPESSLGY---YYLGKTYDQMKLQKEAANYYK 206



 Score = 35.5 bits (81), Expect = 8.0,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 57/163 (34%), Gaps = 21/163 (12%)

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
            +A  + ++     P       + L  A        Y+QA +  +  I   PES      
Sbjct: 131 KEAIVHLSKAIELDPT---KEDAYLHLAISYVRTFDYEQAVNTLKSLIKINPESSLG--- 184

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
           YY +G +Y QM        +  K    Y  + +E   +      A   + + +  L   +
Sbjct: 185 YYYLGKTYDQM--------KLQKEAANYYKKAIEIKPDFE---QAIIDLGISQEGLGLYD 233

Query: 194 VEIGRY--YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
             I  Y   L+   +   +   Q ++  Y   +  E+A+  L+
Sbjct: 234 DAIATYKRLLETNPFN--MNVLQHLVQLYLQQQRLEDALPLLI 274


>gi|329963585|ref|ZP_08301064.1| tetratricopeptide repeat protein [Bacteroides fluxus YIT 12057]
 gi|328528574|gb|EGF55545.1| tetratricopeptide repeat protein [Bacteroides fluxus YIT 12057]
          Length = 277

 Score = 44.3 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 15/117 (12%), Positives = 32/117 (27%), Gaps = 16/117 (13%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVL-----------FLKEQNF 73
            +FF++++        Q S D           Q E +  A                  ++
Sbjct: 6   ILFFTLSLVMSTNSFAQDSTDTLQVDSMAAVPQAE-FSAAKQQGNVTKAEGDSAYMRNDY 64

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           + A + +    +       A           Y A    +A    E  +   P + ++
Sbjct: 65  ASAIQIYENLLKQ---GEAAE-VYYNLGNSYYKADDIAKAILNYERALLLQPGNADI 117


>gi|163757156|ref|ZP_02164258.1| hypothetical protein KAOT1_00785 [Kordia algicida OT-1]
 gi|161322884|gb|EDP94231.1| hypothetical protein KAOT1_00785 [Kordia algicida OT-1]
          Length = 1012

 Score = 44.3 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 44/215 (20%), Positives = 77/215 (35%), Gaps = 28/215 (13%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           +D+    VT+V   +  YE A     + N  KA E F +    FP    A K+    A  
Sbjct: 709 KDLDFVDVTNVELDKATYESAEKQFIQNNTDKAIEGFEKYINQFPNGLNAVKANFYLAQS 768

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
            +S G+ Q+     E Y+ Q   S+  +             +  V  +       +  + 
Sbjct: 769 YFSKGETQKTIPHYE-YVLQNEGSEYTEQAL--------ARLSQVFLETDNYTKAIPVLK 819

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQL--AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
           R+ E              +T  ++ L  A+ E+           Y  A+   + VLAN  
Sbjct: 820 RLEE-------SADFPQNITFAQSNLMKASYEL---------DNYTQAVSYAEKVLANDK 863

Query: 222 -DAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
            D     +A   +  + +A    D+A+E    +Q+
Sbjct: 864 VDNRIKSDAHVIIARSAIATNDEDKAKEAYQEVQK 898



 Score = 43.6 bits (102), Expect = 0.030,   Method: Composition-based stats.
 Identities = 27/236 (11%), Positives = 63/236 (26%), Gaps = 59/236 (25%)

Query: 63  KAVLFLKEQNFSKAYEYFNQC-SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           KA       N+  A E F    + +      A+      A+  +   +Y  A +  E++I
Sbjct: 469 KAETNYLLDNYDLALEGFKSFANANITDTEEAQTIDYNLAYTYFKQKEYASAITNFEKFI 528

Query: 122 TQYPESK------------------------------------NVDYVYYLVGMSYAQMI 145
               +                                      + DY Y+   +SY    
Sbjct: 529 NNNADDTGRINDSYLRLGDSHFVTSNYGDAIKAYDKAIALKGVDEDYAYFQKAISYGFTG 588

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
           +            +  + + + +Y  S     A              E+  G  Y+   +
Sbjct: 589 KTNTK--------IDELEKFINKYRKSSLRDDAL------------YEL--GNTYINEEK 626

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            V  +  +  +++ Y  + +  + + +             A      +  ++P   
Sbjct: 627 TVKGLDTYAKMVSEYPKSSYVPKTILKQGLINYNSGKNQVALTKFRSVVSKFPNTE 682



 Score = 42.8 bits (100), Expect = 0.047,   Method: Composition-based stats.
 Identities = 29/226 (12%), Positives = 70/226 (30%), Gaps = 17/226 (7%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
              YQ+  + +A+    +  + +A E+F++  ++   A    ++    A   Y    Y  
Sbjct: 422 KETYQKVAFYRAIELFNDNKYQEALEFFDKSLKENESAEYTARATFWKAETNYLLDNYDL 481

Query: 113 AASLGEEYITQYPESKN----VDY--VY-------YLVGMSYAQMIRDVPYDQRATKLML 159
           A    + +             +DY   Y       Y   ++  +   +   D    ++  
Sbjct: 482 ALEGFKSFANANITDTEEAQTIDYNLAYTYFKQKEYASAITNFEKFINNNADDTG-RIND 540

Query: 160 QYMSRIVERYTNSPY--VKGARFYVTVGRNQLAAKE-VEIGRYYLKRGEYVAAIPRFQLV 216
            Y+      +  S Y     A       +         +    Y   G+    I   +  
Sbjct: 541 SYLRLGDSHFVTSNYGDAIKAYDKAIALKGVDEDYAYFQKAISYGFTGKTNTKIDELEKF 600

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           +  Y  +   ++A+  L   Y+      +  +  + +   YP+  +
Sbjct: 601 INKYRKSSLRDDALYELGNTYINEEKTVKGLDTYAKMVSEYPKSSY 646



 Score = 41.6 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 51/187 (27%), Gaps = 33/187 (17%)

Query: 64  AVLFLKEQNFSKAYEYFNQCS---RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
              +   + + +A  Y  +     R +      +       +  Y    Y+ A     + 
Sbjct: 252 GESYFNLKKYKEAIPYLKEYKGKKRRWNNTDFYQ-----LGYAYYKQEDYENAIKQFNKI 306

Query: 121 ITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           I     S +V    YY +G  Y    +         +  L       +   +    + A 
Sbjct: 307 ID---GSNSVAQNAYYHLGECYLNTDKK--------QQALNAFRNASQMDFDLKIQEDAG 355

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                     A    EIG        Y +        L  Y D EH  E    LV +Y+ 
Sbjct: 356 LNY-------ARLSYEIG------NPYESVPSVLTSYLKKYPDTEHQAELEELLVSSYIT 402

Query: 240 LALMDEA 246
               + A
Sbjct: 403 SKDYEAA 409



 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 73/209 (34%), Gaps = 31/209 (14%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK--SLLMSAFVQYSAGK-YQQA 113
            + + ++ ++         A   F      FP    A +  +     +++    + Y   
Sbjct: 648 PKTILKQGLINYNSGKNQVALTKFRSVVSKFPNTEEAIQAVATAKLIYIELGQVEVYANW 707

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
               + ++     +  +D   Y           +  + Q  T   ++   + + ++ N  
Sbjct: 708 VKDLD-FVDV--TNVELDKATY--------ESAEKQFIQNNTDKAIEGFEKYINQFPNGL 756

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
               A                 + + Y  +GE    IP ++ VL N   +E+ E+A+ARL
Sbjct: 757 NAVKAN--------------FYLAQSYFSKGETQKTIPHYEYVLQN-EGSEYTEQALARL 801

Query: 234 VEAYVALALMDEAREVVSLIQE--RYPQG 260
            + ++      +A  V+  ++E   +PQ 
Sbjct: 802 SQVFLETDNYTKAIPVLKRLEESADFPQN 830



 Score = 35.5 bits (81), Expect = 8.1,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 76/215 (35%), Gaps = 26/215 (12%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           T+ + +   ++K   +   + + +A  YF +            ++   + ++ Y   KY 
Sbjct: 136 TNSQREDYNFKKGYAYFTSKKYDQAKTYFQKLLDSQ---KYGSQAKYYTGYIAYQEDKYD 192

Query: 112 QAASLGEEYITQYPESKNVDY---VYYLVG-----MSYAQMIRDVPYD--QRATKLMLQY 161
           +A    +        S+  +Y   + Y        +   Q   D+       A +  +  
Sbjct: 193 EANEYFDG------VSEEDEYNEKLSYFKADMNFKLGNFQKAIDLSKKELPNADRKEISE 246

Query: 162 MSRIV-ERYTNSPYVKGARFYVTVGRNQLAAKE----VEIGRYYLKRGEYVAAIPRFQLV 216
           +++I+ E Y N    K A  Y+   + +          ++G  Y K+ +Y  AI +F  +
Sbjct: 247 LNKIIGESYFNLKKYKEAIPYLKEYKGKKRRWNNTDFYQLGYAYYKQEDYENAIKQFNKI 306

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
           +        A+ A   L E Y+      +A     
Sbjct: 307 IDG--SNSVAQNAYYHLGECYLNTDKKQQALNAFR 339


>gi|51261007|gb|AAH78786.1| Protein phosphatase 5, catalytic subunit [Rattus norvegicus]
          Length = 499

 Score = 44.3 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 52/164 (31%), Gaps = 32/164 (19%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKS 96
             +  RD      T ++   E+  +A  + K +++  A ++++Q     P        +S
Sbjct: 11  CAEPPRDEPPAEGT-LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS 69

Query: 97  LLMSAF----VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
               A+       Y+ G   +A  L ++YI            YY    S   +       
Sbjct: 70  ---LAYLRTECYGYALGDATRAIDLDKKYIK----------GYYRRAASNMAL------- 109

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
               +  L+    +V+   N      A+         +  K  E
Sbjct: 110 -GKFRAALRDYETVVKVKPNDK---DAKMKYQECSKIVKQKAFE 149


>gi|328954592|ref|YP_004371926.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfobacca
           acetoxidans DSM 11109]
 gi|328454916|gb|AEB10745.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfobacca
           acetoxidans DSM 11109]
          Length = 668

 Score = 44.3 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 38/118 (32%), Gaps = 34/118 (28%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFP---FAGVAR--------KSLLMSAF------- 102
           Y + V +   + +  A   F++   + P    +   R        K  L  A        
Sbjct: 91  YNQGVDYFHTKQYDLAVATFSRIIANHPDHVESYYNRGLIYTLLGKEELAIADFGTVLRL 150

Query: 103 ------VQY-------SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
                   Y         G+Y QA +     +   P       VY+L G++Y+++ R 
Sbjct: 151 DPVRPAAYYNRGMAHSRRGRYDQAIADYNRALELNPGD---AQVYHLRGIAYSKLGRS 205



 Score = 40.5 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 44/145 (30%), Gaps = 31/145 (21%)

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
            +   +Y  A +     I  +P+       YY  G+ Y  + ++        +L +    
Sbjct: 97  YFHTKQYDLAVATFSRIIANHPDHVES---YYNRGLIYTLLGKE--------ELAIADFG 145

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
            ++        V+ A +Y       +A           +RG Y  AI  +   L      
Sbjct: 146 TVLRLDP----VRPAAYY----NRGMAHS---------RRGRYDQAIADYNRALELNPGD 188

Query: 224 EHAEEAMARLVEAYVALALMDEARE 248
                       AY  L   D A+E
Sbjct: 189 AQVY---HLRGIAYSKLGRSDLAKE 210



 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 34/87 (39%), Gaps = 3/87 (3%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
            G  +Q+  D+      D +     Y + +++ K + +  A   FNQ     P   +A +
Sbjct: 566 TGHLQQAVADLEKAVSLDPKDADAYYNRGLIYDKRKQYDLAIADFNQALALNP--RLA-Q 622

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYIT 122
           +    A      G+ Q+A    E ++ 
Sbjct: 623 AYYDRAVALEKTGRRQEALDSYEAFLR 649



 Score = 36.6 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 16/141 (11%), Positives = 36/141 (25%), Gaps = 33/141 (23%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY-------SAG 108
           Y +  Y +A ++    +  +A     +     P            A   Y          
Sbjct: 552 YAKAYYNRAQVYYFTGHLQQAVADLEKAVSLDP----------KDADAYYNRGLIYDKRK 601

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +Y  A +   + +   P    +   YY   ++  +  R         +  L      +  
Sbjct: 602 QYDLAIADFNQALALNPR---LAQAYYDRAVALEKTGRR--------QEALDSYEAFLRC 650

Query: 169 YTNSPYVKGARFYVTVGRNQL 189
                        +   +N+L
Sbjct: 651 AP-----PELSGQIEKAQNRL 666


>gi|153004639|ref|YP_001378964.1| hypothetical protein Anae109_1777 [Anaeromyxobacter sp. Fw109-5]
 gi|152028212|gb|ABS25980.1| TPR repeat-containing protein [Anaeromyxobacter sp. Fw109-5]
          Length = 710

 Score = 44.3 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 60/199 (30%), Gaps = 45/199 (22%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            +    ++ +N+  A E + +     P    A +            G+  +A +  + ++
Sbjct: 49  SRGRANMRIENYGAAIEAWRKALELNPNGREASR---ELCRALLRNGETDRAVAELDRHL 105

Query: 122 TQYPESKNVD-----------YVY-------YLV-GM-------SYAQMIRDVPYDQRAT 155
            ++P+   +            Y Y       YL  G+          ++ R +  D+R  
Sbjct: 106 GRFPDDWQLAFEQARLLQWSRYAYRSGDAVKYLRMGLARRDDPARRRELARLLGRDRRTL 165

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
              L     ++           A+      +  L             R     AI   + 
Sbjct: 166 DEALDEYRALLAAAPE-----DAKLRDEWLKLLL-----------WDRRHRAEAIRELER 209

Query: 216 VLANYSDAEHAEEAMARLV 234
            LA     E A  A+AR+V
Sbjct: 210 RLAANPGDERAARALARIV 228


>gi|86606961|ref|YP_475724.1| TPR repeat- and protein kinase domain-containing protein
           [Synechococcus sp. JA-3-3Ab]
 gi|86555503|gb|ABD00461.1| protein kinase domain/TPR repeat protein [Synechococcus sp.
           JA-3-3Ab]
          Length = 952

 Score = 44.3 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 70/204 (34%), Gaps = 38/204 (18%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++  +  K  +++ A E F +  +     G A ++       +Y  G Y+ A +     +
Sbjct: 337 QRGSVRYKTGDWAGAVEDFTRAIQL--GGGDA-RTYFNRGIARYRLGNYEGAVADYTHAL 393

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                  +    YY  G +Y Q+      DQ   +  ++  SR +E           R Y
Sbjct: 394 RL---DPHWALAYYSRGNAYRQL------DQ--PQQAIEDYSRALELNPE-----EVRAY 437

Query: 182 VT--VGRNQLAAKEVEIGRY-------------YLKRGEYVAAIPRFQLVLANYSDA--- 223
               V R QL   +  +  +             Y  RG   A +  FQ  + +Y+ A   
Sbjct: 438 FNRGVVRGQLGDAQGAVADFSEVLRRDPQDTEAYFNRGVARAQLLDFQGAIEDYTQALQL 497

Query: 224 -EHAEEAMARLVEAYVALALMDEA 246
                +A  R   A  AL  +  A
Sbjct: 498 DPGHPKACYRRGLARQALGDLQGA 521



 Score = 36.2 bits (83), Expect = 5.4,   Method: Composition-based stats.
 Identities = 15/127 (11%), Positives = 35/127 (27%), Gaps = 20/127 (15%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGV------ARKSLLMS--AFV 103
           D  + +  Y + +      +   A   F    +              A ++ L    A  
Sbjct: 498 DPGHPKACYRRGLARQALGDLQGAITDFSQAIALRATQGEEPSGAVAAAQAELYLQRAVA 557

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
             S    + A +  E+ +   P    +   ++  G++   +              L   +
Sbjct: 558 YLSNNALEAALADCEQALRLNPA---LALAHFYRGLARQGLGDPAG--------ALADFN 606

Query: 164 RIVERYT 170
           R +E   
Sbjct: 607 RALELDP 613


>gi|42524129|ref|NP_969509.1| soluble lytic murein transglycosylase [Bdellovibrio bacteriovorus
           HD100]
 gi|39576337|emb|CAE80502.1| soluble lytic murein transglycosylase [Bdellovibrio bacteriovorus
           HD100]
          Length = 790

 Score = 44.3 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 40/94 (42%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           + F +    S A    V     S    Y  S      ++ +Y+ A L  + Q++  A   
Sbjct: 264 FDFLILFASSAARAGEVQLAVGSYYSAYKLSPKSKTGRQALYQSAFLSYQFQDYDGAARR 323

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
           F +  + +P +G+ R +    A+++Y  G YQ A
Sbjct: 324 FQEFMKAYPSSGLNRDAQWHLAWLKYLKGDYQGA 357



 Score = 36.2 bits (83), Expect = 4.4,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 14/83 (16%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
              + L   ++  AY+         P +   R++L  SAF+ Y    Y  AA   +E++ 
Sbjct: 277 AGEVQLAVGSYYSAYKL-------SPKSKTGRQALYQSAFLSYQFQDYDGAARRFQEFMK 329

Query: 123 QYPESK-------NVDYVYYLVG 138
            YP S        ++ ++ YL G
Sbjct: 330 AYPSSGLNRDAQWHLAWLKYLKG 352



 Score = 35.5 bits (81), Expect = 8.9,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 73/207 (35%), Gaps = 47/207 (22%)

Query: 63  KAVLFLKEQNFSKAYE----YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           +A  +L+E   +KA E    Y+    R+F F       L++ A     AG+ Q A     
Sbjct: 236 QAQFYLQEGEVTKAVELLKPYYEANKRNFDF-------LILFASSAARAGEVQLAVGSYY 288

Query: 119 EYITQYPESKNVDYVYYLVG-MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
                 P+SK      Y    +SY    +D            +     ++ Y +S   + 
Sbjct: 289 SAYKLSPKSKTGRQALYQSAFLSY--QFQDYDG-------AARRFQEFMKAYPSSGLNRD 339

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLK---RGEYV------AAIPRFQLVLANYSDAEHAEE 228
           A++++   +             YLK   +G Y       AA  + +    ++ +      
Sbjct: 340 AQWHLAWLK-------------YLKGDYQGAYKALGNLNAAKKKNRKAWKSFPEDRVT-- 384

Query: 229 AMARLVEAYVALALMDEAREVVSLIQE 255
               +  +      +++A+ ++S + +
Sbjct: 385 --YWMAMSLFRQGKVEQAKAMMSSLAK 409


>gi|163782812|ref|ZP_02177808.1| hypothetical protein HG1285_15791 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881933|gb|EDP75441.1| hypothetical protein HG1285_15791 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 546

 Score = 44.3 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 72/204 (35%), Gaps = 36/204 (17%)

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
           + +  KA E   +  + FP     ++  +  A     +G+ ++A  + + +    P +  
Sbjct: 97  KGDRKKAIEVLEKARKKFP---KNKEIFIFLADEYIKSGRMKEAKEVLQRFAELSPNNP- 152

Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
             + YYL+G  Y    + V       +  L         +                    
Sbjct: 153 --FPYYLLGQLYLSEGK-VDRAIEYLQRALDIRKTFEAAF-------------------- 189

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
               V +G+ Y +   +  A   ++ +L    +      A+ +L + Y+A   + EA+E+
Sbjct: 190 ----VTLGKIYERSERFSEAEKLYRSILKEDPNNRS---ALEKLAQLYMATGRIQEAKEL 242

Query: 250 VSLIQERYPQGYWAR--YVETLVK 271
              +    P  Y  +  +  TL++
Sbjct: 243 YERLYRIDPTNYQYKHQFAVTLLQ 266


>gi|197106555|ref|YP_002131932.1| hypothetical protein PHZ_c3094 [Phenylobacterium zucineum HLK1]
 gi|196479975|gb|ACG79503.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
          Length = 282

 Score = 44.3 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 38/102 (37%), Gaps = 14/102 (13%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
                +  VE + +      AR++          K + +      RG +  A   +   +
Sbjct: 175 AEDAFAAFVETWPDGQRTPEARYWW--------GKTLSV------RGAHNDAATAYIGAI 220

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
             +     A +A+  L  + VAL    +A   ++ + +RYP+
Sbjct: 221 RGWPQTSWAPDAVVELARSLVALKKPQDACRTLAELPKRYPK 262


>gi|90418978|ref|ZP_01226889.1| conserved hypothetical protein [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90337058|gb|EAS50763.1| conserved hypothetical protein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 315

 Score = 44.3 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 38/134 (28%), Gaps = 23/134 (17%)

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
             A+    AG YQ A     +Y   YP + +     Y +G S  Q  +            
Sbjct: 196 DLAYNYLLAGDYQLAEQAFRQYAQTYPTAADAPDARYWLGESLYQQQKFAD--------A 247

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
            +      +    +         + +   +L  +E               A   ++ V  
Sbjct: 248 AEVFLEAQKSAPENGKAPEMMLKLGMSLAKLDNRE--------------TACITYKEVAK 293

Query: 219 NYSD-AEHAEEAMA 231
            Y   + +  + +A
Sbjct: 294 RYPQMSSNVRKKLA 307



 Score = 40.9 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 46/141 (32%), Gaps = 10/141 (7%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
            V  L         +         + +   Y+ A  +L   ++  A + F Q ++ +P A
Sbjct: 167 GVPGLGDSAPSGGSETVAAITPGGQGET--YDLAYNYLLAGDYQLAEQAFRQYAQTYPTA 224

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
             A  +        Y   K+  AA +  E     PE+     +   +GMS A++      
Sbjct: 225 ADAPDARYWLGESLYQQQKFADAAEVFLEAQKSAPENGKAPEMMLKLGMSLAKLDNR--- 281

Query: 151 DQRATKLMLQYMSRIVERYTN 171
                +        + +RY  
Sbjct: 282 -----ETACITYKEVAKRYPQ 297


>gi|291571512|dbj|BAI93784.1| TPR domain protein [Arthrospira platensis NIES-39]
          Length = 491

 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 39/127 (30%), Gaps = 14/127 (11%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
            S    +   E +E+         + +A + + +     P    A           Y  G
Sbjct: 20  PSGLAAQTVGEWFERGNAARAAGRYREAEQIWREFLEIEPNNAYAHN---NLGVALYHQG 76

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           K  +A       +   P +    + +  +G++ A        DQ      ++   R +  
Sbjct: 77  KLPEAIEAYRRALALDPNN---AWAHNNLGLALA--------DQGKLPEAIEAYRRALAL 125

Query: 169 YTNSPYV 175
            +N+ Y 
Sbjct: 126 DSNNAYA 132



 Score = 35.5 bits (81), Expect = 7.7,   Method: Composition-based stats.
 Identities = 9/56 (16%), Positives = 15/56 (26%), Gaps = 3/56 (5%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
              V    +    +A E + +     P    A        +  Y  GK  +A    
Sbjct: 135 NLGVALRNQGKLPEAIEAYRRALALDPNNAYAHN---NLGYALYLQGKLPEAIDAY 187


>gi|262370232|ref|ZP_06063558.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
 gi|262314574|gb|EEY95615.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
          Length = 281

 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 45/118 (38%), Gaps = 13/118 (11%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           Q   K  +  M   ++   NS Y+  A F+       LA   + I     +   Y  A  
Sbjct: 176 QGGAKKAIAPMQNFIKNNPNSVYISNAYFW-------LAEFNLAI-----EPTNYAEAKK 223

Query: 212 RFQLVLANYSDAEHAEEAMARLVE-AYVALALMDEAREVVSLIQERYPQGYWARYVET 268
            + +V   Y ++  A  A+ +L   A        +A +  + + ++YP+   A + + 
Sbjct: 224 NYGIVANQYPNSSRAPRAVYQLYNIAKEVDKNTTQANQYKAKLLKQYPKSEEATFFKK 281



 Score = 35.5 bits (81), Expect = 9.1,   Method: Composition-based stats.
 Identities = 11/78 (14%), Positives = 27/78 (34%), Gaps = 6/78 (7%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y  G  ++A +  + +I   P S  +   Y+   ++   +  +            +    
Sbjct: 174 YKQGGAKKAIAPMQNFIKNNPNSVYISNAYFW--LAEFNLAIE----PTNYAEAKKNYGI 227

Query: 165 IVERYTNSPYVKGARFYV 182
           +  +Y NS     A + +
Sbjct: 228 VANQYPNSSRAPRAVYQL 245


>gi|223935536|ref|ZP_03627453.1| TPR repeat-containing protein [bacterium Ellin514]
 gi|223895946|gb|EEF62390.1| TPR repeat-containing protein [bacterium Ellin514]
          Length = 1072

 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 43/109 (39%), Gaps = 14/109 (12%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A ++++  + + A     Q  R  P      ++ L+ A    + G Y +A  + ++    
Sbjct: 374 AEIYIRSGDLNSAVALLTQLVRQQP---RLVQAQLLLAEAYRARGNYAEALGIYDQLRQS 430

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           +P      YV Y  G+++ QM +         +   +   +++    ++
Sbjct: 431 FPHEPQ--YV-YKAGLTFIQMNKK--------EEAQKAFEKVLVMSPDN 468



 Score = 42.4 bits (99), Expect = 0.062,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 69/211 (32%), Gaps = 28/211 (13%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A   L E+ F +A    ++     P      +   +        G   +A +  E+ +  
Sbjct: 272 AETALSEKQFDEAMAIIDKVLIRDPENFDFLQ---LHGRTYLGKGDSAKALAEFEKTVRL 328

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN-----------S 172
           YP+S      +Y + ++      D P    + K  L     +   Y             S
Sbjct: 329 YPQSPQ---AFYHLALAQMVA-NDSPKALGSLKQALA----LNRSYPEAQLLSAEIYIRS 380

Query: 173 PYVKGARFYVTVGRN---QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
             +  A   +T       +L   ++ +   Y  RG Y  A+  +  +  ++    H  + 
Sbjct: 381 GDLNSAVALLTQLVRQQPRLVQAQLLLAEAYRARGNYAEALGIYDQLRQSFP---HEPQY 437

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260
           + +    ++ +   +EA++    +    P  
Sbjct: 438 VYKAGLTFIQMNKKEEAQKAFEKVLVMSPDN 468


>gi|298374133|ref|ZP_06984091.1| TPR domain protein [Bacteroides sp. 3_1_19]
 gi|298268501|gb|EFI10156.1| TPR domain protein [Bacteroides sp. 3_1_19]
          Length = 1186

 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 58/177 (32%), Gaps = 26/177 (14%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
                  +    E    ++P++++    YY V   Y   ++        T L  +Y +++
Sbjct: 607 KLEDIPLSVEAFENLERRFPDNEHRLESYYQV---YLMALKT-----GNTALATEYKNKL 658

Query: 166 VERYTNSPYVKGAR--------FYVTVGRNQLAAKEVEIGRY--YLKRG-EYVAAIPRFQ 214
           +  +  S Y               + V ++      +    Y  YL+    YV     F+
Sbjct: 659 MNAFPESDYAVAVADPNYEYNIRMMDVVQDS-----IYQATYDRYLESDTAYV--RKSFR 711

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
            V   Y  A    + M     +YV     +  +  +  + E+YP          ++K
Sbjct: 712 YVSEKYPLATLMPKFMFLDALSYVQAGDAEGFKNALKALVEKYPNADVTELAGEMLK 768


>gi|262382954|ref|ZP_06076091.1| TPR domain-containing protein [Bacteroides sp. 2_1_33B]
 gi|262295832|gb|EEY83763.1| TPR domain-containing protein [Bacteroides sp. 2_1_33B]
          Length = 1181

 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 58/177 (32%), Gaps = 26/177 (14%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
                  +    E    ++P++++    YY V   Y   ++        T L  +Y +++
Sbjct: 607 KLEDIPLSVEAFENLERRFPDNEHRLESYYQV---YLMALKT-----GNTALATEYKNKL 658

Query: 166 VERYTNSPYVKGAR--------FYVTVGRNQLAAKEVEIGRY--YLKRG-EYVAAIPRFQ 214
           +  +  S Y               + V ++      +    Y  YL+    YV     F+
Sbjct: 659 MNAFPESDYAVAVADPNYEYNIRMMDVVQDS-----IYQATYDRYLESDTAYV--RKSFR 711

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
            V   Y  A    + M     +YV     +  +  +  + E+YP          ++K
Sbjct: 712 YVSEKYPLATLMPKFMFLDALSYVQAGDAEGFKNALKALVEKYPNADVTELAGEMLK 768


>gi|261416875|ref|YP_003250558.1| hypothetical protein Fisuc_2490 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261373331|gb|ACX76076.1| hypothetical protein Fisuc_2490 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302325951|gb|ADL25152.1| putative lipoprotein [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 693

 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 18/121 (14%), Positives = 41/121 (33%), Gaps = 16/121 (13%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQA 113
           +    +Y +A      ++  KAY  ++     +     VA+K+    A V     ++ +A
Sbjct: 557 KSADSLYTQA------KSLEKAYLAWSGIRERYVDIDSVAKKATFELAHVYSDQEEFDKA 610

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMS-YAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
                 +   +P+S + +   +  G      + +D           L+      + Y  S
Sbjct: 611 QREYRAFYRTWPDSPDAEKAMFSRGFILNENLHKDA--------EALKVFEEFKKLYPKS 662

Query: 173 P 173
            
Sbjct: 663 E 663



 Score = 35.9 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 5/94 (5%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
           + W     R V +DSV         +E A ++  ++ F KA   +    R +P +  A K
Sbjct: 574 LAWSGIRERYVDIDSVAKKAT----FELAHVYSDQEEFDKAQREYRAFYRTWPDSPDAEK 629

Query: 96  SLLMSAFV-QYSAGKYQQAASLGEEYITQYPESK 128
           ++    F+   +  K  +A  + EE+   YP+S+
Sbjct: 630 AMFSRGFILNENLHKDAEALKVFEEFKKLYPKSE 663


>gi|217033595|ref|ZP_03439023.1| hypothetical protein HP9810_899g31 [Helicobacter pylori 98-10]
 gi|216943941|gb|EEC23375.1| hypothetical protein HP9810_899g31 [Helicobacter pylori 98-10]
          Length = 793

 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 32/99 (32%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
             + RA   +    ++   + L I   + +                +  TD      +Y 
Sbjct: 207 RTISRAFKNYPQTIFKKDLYLLEIIALVQLGIKKSLLIDIGTKWIKNYPTDPSIPEVLYY 266

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
            A    +  N+ +A  Y+ +   ++  +  A  + +  A
Sbjct: 267 VAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRLA 305



 Score = 44.0 bits (103), Expect = 0.020,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 50/137 (36%), Gaps = 9/137 (6%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             +T   Y    Y +A   +  Q +  A    ++  +++P     +   L+        G
Sbjct: 178 PLLTTKGYDLNAYLEAKKQINSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIALVQLG 237

Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            K      +G ++I  YP   ++  V Y V  +  +            K  ++Y  RI+ 
Sbjct: 238 IKKSLLIDIGTKWIKNYPTDPSIPEVLYYVAKALDEN--------NNYKQAMRYYKRILL 289

Query: 168 RYTNSPYVKGARFYVTV 184
            Y NS Y   A+  + +
Sbjct: 290 EYKNSRYAPLAQMRLAI 306


>gi|157879372|pdb|1NA3|A Chain A, Design Of Stable Alpha-Helical Arrays From An Idealized
           Tpr Motif
 gi|157879373|pdb|1NA3|B Chain B, Design Of Stable Alpha-Helical Arrays From An Idealized
           Tpr Motif
          Length = 91

 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 25/70 (35%), Gaps = 3/70 (4%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y     + K+ ++ +A EY+ +     P      ++        Y  G Y +A    ++ 
Sbjct: 13  YNLGNAYYKQGDYDEAIEYYQKALELDPNNA---EAWYNLGNAYYKQGDYDEAIEYYQKA 69

Query: 121 ITQYPESKNV 130
           +   P +   
Sbjct: 70  LELDPNNAEA 79



 Score = 38.6 bits (89), Expect = 0.92,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 30/85 (35%), Gaps = 11/85 (12%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           + ++        Y  G Y +A    ++ +   P +      +Y +G +Y +        Q
Sbjct: 8   SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN---AEAWYNLGNAYYK--------Q 56

Query: 153 RATKLMLQYMSRIVERYTNSPYVKG 177
                 ++Y  + +E   N+   K 
Sbjct: 57  GDYDEAIEYYQKALELDPNNAEAKQ 81


>gi|320160833|ref|YP_004174057.1| hypothetical protein ANT_14290 [Anaerolinea thermophila UNI-1]
 gi|319994686|dbj|BAJ63457.1| hypothetical protein ANT_14290 [Anaerolinea thermophila UNI-1]
          Length = 839

 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 57/137 (41%), Gaps = 13/137 (9%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
           Y++   D+    ++  +A    +  N+ +KA E + +C   FP A ++R++L ++    Y
Sbjct: 424 YVNKAGDIEDAPQILFEAGRIFERGNYLTKAVETWQECHEKFPAAEISRRALFLAGITLY 483

Query: 106 SAGKYQQAASLGEEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
               + Q+  + + ++     PE +   Y++  VG +Y          +   +       
Sbjct: 484 RLNDFSQSRLIFQRFLILSDNPEDQAAAYLW--VGKTYQA--------ENNLQQAKIAWE 533

Query: 164 RIVERYTNSPYVKGARF 180
           + V+R     Y + A  
Sbjct: 534 QAVQRDPTGYYSQRASE 550



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 76/215 (35%), Gaps = 22/215 (10%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           E     L   +F +A E F           +  ++L+      Y +  Y+QA     + I
Sbjct: 97  ELGESHLFMGDFDRAREEFQNILTTTNDEKIQAEALIELGKTSYLSRNYEQAIKELTQGI 156

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY---MSRIVERYT-----NSP 173
           TQ P+SKN    +  + +S+  + +         KL       ++  ++ +      N+ 
Sbjct: 157 TQNPQSKNAGTAWLHLALSFEALNKPDAASDAYAKLAEIIPPVLNDYIQEWRGDALLNAQ 216

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ---LVLANY-----SDAEH 225
               A     +  + L A    +   +LK  +   A+ R Q     ++ +     S +  
Sbjct: 217 RPAEAAQAYQMALDALPADTDAV---WLKIKK-ARALARAQDTSTAISEFLSAYESTSNQ 272

Query: 226 AEEAM--ARLVEAYVALALMDEAREVVSLIQERYP 258
             +A     L + Y+ L + ++A          YP
Sbjct: 273 YAKAQINFLLGQIYLNLGVPEQAYARFQDSVTNYP 307



 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 39/136 (28%), Gaps = 26/136 (19%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV------------QYSAGKYQ 111
             ++L      +AY  F     ++P A  +   L+                  Y AG+Y 
Sbjct: 283 GQIYLNLGVPEQAYARFQDSVTNYPMAYDSYSGLVELIKAGQPVDELNRGLVDYFAGQYG 342

Query: 112 QAASLGEEYITQYPESKNVD--YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            A      YI    +S+       +Y  GMS   M              +     I+E+ 
Sbjct: 343 LAVEAFTRYI----DSQEAPSSTAFYYRGMSRFYM--------SEYGNAIADFDVIIEKN 390

Query: 170 TNSPYVKGARFYVTVG 185
            N  +   A       
Sbjct: 391 PNDRFWVKAYQQKAYI 406


>gi|224539995|ref|ZP_03680534.1| hypothetical protein BACCELL_04907 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224518385|gb|EEF87490.1| hypothetical protein BACCELL_04907 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 279

 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 13/122 (10%), Positives = 32/122 (26%), Gaps = 14/122 (11%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLF----------L 68
           + K     F  + +      +  S      +    +    E    A              
Sbjct: 2   MKKILFFTFVGLLMALTSFGQTASDTLQQANDSVTIGSHTEFSAAAQENSVTKAEGDSVY 61

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
            + +++ A + +    ++      A           Y AG   +A    E  +   P + 
Sbjct: 62  VKNDYASAIQIYEALLKE---GEAAE-VYYNLGNSYYKAGDIAKAILNYERALLIQPGNA 117

Query: 129 NV 130
           ++
Sbjct: 118 DI 119


>gi|78357188|ref|YP_388637.1| TPR domain-containing protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78219593|gb|ABB38942.1| TPR domain protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 335

 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 53/142 (37%), Gaps = 8/142 (5%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           +    +         +YE+A+   KE+N+  A   + + +  FP   +   ++       
Sbjct: 202 NTTAQTAPKADPADMLYEQALASFKERNYQAAQRQWKEFATAFPAHAMVANAVFWQGECF 261

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y    Y +A    ++ +T++ +S       YL  M   +    +      TK     +  
Sbjct: 262 YQMEDYARAVLAYQDVVTKHADSSK-----YLPAM--LKQGISLIR-LGKTKAGKIRLEE 313

Query: 165 IVERYTNSPYVKGARFYVTVGR 186
           I++++  +P  K A   +   +
Sbjct: 314 IIKKHPGTPEAKRAATVLKETK 335



 Score = 39.3 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 43/139 (30%), Gaps = 22/139 (15%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
           L   A   +    YQ A    +E+ T +P    V    +  G  + QM  D         
Sbjct: 217 LYEQALASFKERNYQAAQRQWKEFATAFPAHAMVANAVFWQGECFYQM-EDYAR------ 269

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             +     +V ++ +S     A     +   +L              G+  A   R + +
Sbjct: 270 -AVLAYQDVVTKHADSSKYLPAMLKQGISLIRL--------------GKTKAGKIRLEEI 314

Query: 217 LANYSDAEHAEEAMARLVE 235
           +  +     A+ A   L E
Sbjct: 315 IKKHPGTPEAKRAATVLKE 333


>gi|300866960|ref|ZP_07111632.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
 gi|300335064|emb|CBN56796.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
          Length = 156

 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 46/116 (39%), Gaps = 18/116 (15%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASL 116
           E+  ++ + L   +FS+A +   +   D P FA    R+++L      Y+ G YQ++   
Sbjct: 42  EMLRRSQILLDAGDFSRALDILTKLIADSPDFAEAWNRRAVL-----YYTQGDYQKSLDD 96

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
            EE I   P         + +G+ YA +           +  +    + +E    S
Sbjct: 97  CEEVIKINPIHFG---ALHGLGLCYAAL--------GNYRKAIVAFRQALEIQPYS 141


>gi|255558752|ref|XP_002520400.1| protein phosphatase-5, putative [Ricinus communis]
 gi|223540447|gb|EEF42016.1| protein phosphatase-5, putative [Ricinus communis]
          Length = 476

 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 37/130 (28%), Gaps = 33/130 (25%)

Query: 64  AVLFLKEQNFSKAYEYFN---QCSRD---FPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           A    K   + +A + +    + +     +     A ++     F      +Y  A    
Sbjct: 12  ANEAFKAHKYGQAIDLYTQAIKLNGQNAVY----WANRA-----FAHTKLEEYGSAIQDA 62

Query: 118 EEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
              I   P+     Y   YY  G +Y  M           K  L+   ++ +   N P  
Sbjct: 63  TMAIEIDPK-----YSKGYYRRGAAYLAM--------GKFKEALKDFQQVKKICPNDP-- 107

Query: 176 KGARFYVTVG 185
             A   +   
Sbjct: 108 -DATKKLKEC 116


>gi|218439579|ref|YP_002377908.1| hypothetical protein PCC7424_2626 [Cyanothece sp. PCC 7424]
 gi|218172307|gb|ACK71040.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424]
          Length = 169

 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 13/136 (9%), Positives = 44/136 (32%), Gaps = 7/136 (5%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
           ++++ F+   +   +  +     +D + + ++  + +      ++  A E F +    +P
Sbjct: 23  AVSLSFVSSSDESLNLGLISQVSSDEQIREDMLIEGMDKGILGDYQGAIEDFTEVIDLYP 82

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
            +    ++           G Y  A +   + I+    + N+   Y      Y     + 
Sbjct: 83  DSA---EAYYNRGIAYSKLGNYDAAIADYNQAISL---NSNLAEAYVDRAKIYFH-FGNS 135

Query: 149 PYDQRATKLMLQYMSR 164
               +  +       +
Sbjct: 136 SKGLKDLQRAADIFKQ 151


>gi|116329178|ref|YP_798898.1| thioredoxin domain-containing protein [Leptospira borgpetersenii
           serovar Hardjo-bovis L550]
 gi|116330214|ref|YP_799932.1| thioredoxin domain-containing protein [Leptospira borgpetersenii
           serovar Hardjo-bovis JB197]
 gi|116121922|gb|ABJ79965.1| Thioredoxin domain-containing protein [Leptospira borgpetersenii
           serovar Hardjo-bovis L550]
 gi|116123903|gb|ABJ75174.1| Thioredoxin domain-containing protein [Leptospira borgpetersenii
           serovar Hardjo-bovis JB197]
          Length = 332

 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 17/153 (11%), Positives = 51/153 (33%), Gaps = 25/153 (16%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---------SRDFPFAGVA 93
            ++       D    +  ++  V + + + ++KA ++F +           +        
Sbjct: 196 EKEYLEKLAKDPNGIKTNFQAGVYYFEAKEYTKAIQFFRKVIDANDTKNTDKKH------ 249

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
             +L          G ++ A +    YI++YP   ++  + Y    +Y ++ R       
Sbjct: 250 -DALFNLGISYLEVGNFKFAIATFNSYISRYPNG-DLSSILYFRANAYEELNRK------ 301

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
             +       +++E   +    +  +F +    
Sbjct: 302 --EEAKADYKKVLELTVDPEEKRDLQFRIDSLN 332



 Score = 39.3 bits (91), Expect = 0.58,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 2/76 (2%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLA--NYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
            + G YY +  EY  AI  F+ V+   +  + +   +A+  L  +Y+ +     A    +
Sbjct: 214 FQAGVYYFEAKEYTKAIQFFRKVIDANDTKNTDKKHDALFNLGISYLEVGNFKFAIATFN 273

Query: 252 LIQERYPQGYWARYVE 267
               RYP G  +  + 
Sbjct: 274 SYISRYPNGDLSSILY 289


>gi|297579702|ref|ZP_06941629.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297535348|gb|EFH74182.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 413

 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 48/133 (36%), Gaps = 14/133 (10%)

Query: 4   VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63
           +L  A+C+F         F+L + F +++     W    S  +  D      +  E Y +
Sbjct: 107 LLIAALCLFRRGVI----FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMRMFNNEQYAQ 159

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLG 117
           A    ++  +  A  Y+ +          ++ +          A      G+ Q+A  L 
Sbjct: 160 AAEAFRDPRWQGAARYYAK-DYQGAIDAYSQIANPDTATQYNLANAYAQTGELQKAQDLY 218

Query: 118 EEYITQYPESKNV 130
           E+ + Q P  ++ 
Sbjct: 219 EQVLKQEPNHQDA 231


>gi|161528189|ref|YP_001582015.1| TPR repeat-containing protein [Nitrosopumilus maritimus SCM1]
 gi|160339490|gb|ABX12577.1| Tetratricopeptide TPR_2 repeat protein [Nitrosopumilus maritimus
           SCM1]
          Length = 375

 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 47/122 (38%), Gaps = 15/122 (12%)

Query: 50  SVTDVRYQRE-VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           S+ DV Y R+ +++K V  + ++   +A   F Q  R  P        LL   + ++   
Sbjct: 28  SLVDVDYNRKRLFKKGVNLMADEKLEEAITVFEQALRIDPDNVET---LLKLGYARFHLD 84

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
            + +A  + ++ +     +      + L G+ + +        Q+     L  + + +E 
Sbjct: 85  DHHEALRVYDKILDIDVTNPE---AWNLKGLVHYE--------QKNYSKALDSVEKAIET 133

Query: 169 YT 170
             
Sbjct: 134 DP 135


>gi|149731218|ref|XP_001500110.1| PREDICTED: similar to LOC511799 protein [Equus caballus]
          Length = 697

 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 6/68 (8%)

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           F  Y  G+Y +A    + Y+  +P+ ++V     LV + Y + + D   D  A+    + 
Sbjct: 304 FAYYRVGEYVKALECAKAYLLLHPDDEDV-----LVNVDYYESLLDDSVDP-ASIEARED 357

Query: 162 MSRIVERY 169
           ++  V+R+
Sbjct: 358 LAMFVKRH 365


>gi|256422077|ref|YP_003122730.1| hypothetical protein Cpin_3056 [Chitinophaga pinensis DSM 2588]
 gi|256036985|gb|ACU60529.1| TPR repeat-containing protein [Chitinophaga pinensis DSM 2588]
          Length = 543

 Score = 44.3 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 57/195 (29%), Gaps = 36/195 (18%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D    +  Y + + + +   +  A   F       P   VA +      +      K   
Sbjct: 373 DPDALQHYYNRGLAYYQWGAYEPAIADFTTLITKGPPNAVAYRYRGNL-YTY--VNKPAL 429

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A +   + I   P+ +   Y   + G++YA         Q   K  +Q  S  ++    S
Sbjct: 430 AIADISKAIDLAPK-EAESYA--VRGLAYAL--------QADYKQAVQDFSTSIKLDPGS 478

Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS-DAEHAEEAMA 231
                           LA K +           Y AAI  +   +     D +  +E   
Sbjct: 479 --------KTIYVNRALAYKYLN---------NYKAAIKDYTQAIELDPNDVDVYKER-- 519

Query: 232 RLVEAYVALALMDEA 246
              + Y  +   D A
Sbjct: 520 --GKVYEQMGKKDLA 532



 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 67/206 (32%), Gaps = 37/206 (17%)

Query: 14  AWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF 73
               ++    L +  +I+   L+     +      DS+         Y +   +LKE+++
Sbjct: 30  QAIRRMKYIPLKLVRNISGLLLL---TTTMAYGQTDSLLVHSRSTAYYAEGKSYLKEKDY 86

Query: 74  SKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
           + A + F       P  +  A        F        + A     + +     + N  +
Sbjct: 87  NAAIQSFTAAIAIHPTDSAYA-----NLGFAYIRKENDKNAFVALNKALDL---NGNYAW 138

Query: 133 VYYLVG----------MSYAQMIRDVPY-----DQRATKLMLQYMSRIVERYT------- 170
            Y L G          +S+    R +       D    +  +     ++  YT       
Sbjct: 139 AYCLRGYLYTKINVPELSFNDFSRAIALNAKGGDLSGAQNAVSD-KSVIRDYTKKIGKDP 197

Query: 171 --NSPYVKGARFYVTVGRNQLAAKEV 194
             +S Y++ AR Y +  +N+ A K+ 
Sbjct: 198 KDDSAYLQRARAYESREKNKQAVKDY 223


>gi|218439885|ref|YP_002378214.1| hypothetical protein PCC7424_2942 [Cyanothece sp. PCC 7424]
 gi|218172613|gb|ACK71346.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7424]
          Length = 632

 Score = 44.3 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 57/195 (29%), Gaps = 43/195 (22%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
            +    +    +A   +N+     P    A        F  Y+ GK ++A +     I  
Sbjct: 169 GIALYNQGKLEEAIAAYNKAIEINP--NYAE-VYSNLGFALYNQGKLEEAIAAYNTAIEI 225

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
            P      + Y  +G++ +         Q   +  +   +  +E   N            
Sbjct: 226 NPND---AFAYNNLGIALSN--------QGKLEEAIAAYNTAIEINPN------------ 262

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA-- 241
              +  A   + +  Y   +G+   AI  +   +    +             AY+ L   
Sbjct: 263 ---DAFAYNNLGVALY--NQGKLEEAIAAYNTAIEINPNDAF----------AYIGLGIA 307

Query: 242 LMDEAREVVSLIQER 256
           L D+ +   ++    
Sbjct: 308 LHDQGKLEEAIAAYN 322



 Score = 43.2 bits (101), Expect = 0.037,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 44/130 (33%), Gaps = 16/130 (12%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
              +    +   +++E+      E NF++A   F Q  +  P    A +          +
Sbjct: 16  VPPNPILAQNIDQLFEQGNAAQNEGNFTEAERIFRQVIKINPNNADAYRY---LGIALRN 72

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
            GK ++A +     I   P   N   VY  +G++           Q   +  +   +  +
Sbjct: 73  QGKLEEAIAAYNTAIEINP---NYAEVYNNLGVALYY--------QGKLEEAIAAYNTAI 121

Query: 167 ERYTNSPYVK 176
           E   N  Y +
Sbjct: 122 EINPN--YAE 129


>gi|13929024|ref|NP_113917.1| serine/threonine-protein phosphatase 5 [Rattus norvegicus]
 gi|1709745|sp|P53042|PPP5_RAT RecName: Full=Serine/threonine-protein phosphatase 5; Short=PP5;
           AltName: Full=Protein phosphatase T; Short=PPT
 gi|663080|emb|CAA54454.1| protein phosphatase T (PPT) [Rattus norvegicus]
 gi|149056851|gb|EDM08282.1| protein phosphatase 5, catalytic subunit, isoform CRA_a [Rattus
           norvegicus]
          Length = 499

 Score = 44.3 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 52/164 (31%), Gaps = 32/164 (19%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKS 96
             +  RD      T ++   E+  +A  + K +++  A ++++Q     P        +S
Sbjct: 11  CAEPPRDEPPAEGT-LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS 69

Query: 97  LLMSAF----VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
               A+       Y+ G   +A  L ++YI            YY    S   +       
Sbjct: 70  ---LAYLRTECYGYALGDATRAIELDKKYIK----------GYYRRAASNMAL------- 109

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
               +  L+    +V+   N      A+         +  K  E
Sbjct: 110 -GKFRAALRDYETVVKVKPNDK---DAKMKYQECSKIVKQKAFE 149


>gi|317009958|gb|ADU80538.1| putative paralysed flagella protein PflA; putative signal peptide
           [Helicobacter pylori India7]
          Length = 803

 Score = 44.3 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 50/137 (36%), Gaps = 9/137 (6%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             +T   Y    Y +A   +  Q +  A    ++  +++P     +   L+        G
Sbjct: 188 PLLTTKGYDLNAYLEAKKQIHSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIALGQLG 247

Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            K      +G ++I  YP   N+  V Y V  +  +            K  ++Y  RI+ 
Sbjct: 248 IKKSLLIDIGTKWIKNYPTDPNIPEVLYYVAKALDEN--------NNYKQAMRYYKRILL 299

Query: 168 RYTNSPYVKGARFYVTV 184
            Y NS Y   A+  + +
Sbjct: 300 EYQNSRYAPLAQMRLAI 316



 Score = 43.2 bits (101), Expect = 0.040,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 31/99 (31%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
             + RA   +    ++   + L I     +                +  TD      +Y 
Sbjct: 217 RTISRAFKNYPQTIFKKDLYLLEIIALGQLGIKKSLLIDIGTKWIKNYPTDPNIPEVLYY 276

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
            A    +  N+ +A  Y+ +   ++  +  A  + +  A
Sbjct: 277 VAKALDENNNYKQAMRYYKRILLEYQNSRYAPLAQMRLA 315


>gi|317060726|ref|ZP_07925211.1| tetratricopeptide repeat family protein [Fusobacterium sp. D12]
 gi|313686402|gb|EFS23237.1| tetratricopeptide repeat family protein [Fusobacterium sp. D12]
          Length = 917

 Score = 44.3 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 24/70 (34%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           ++ A  +  E+ + +A   F      +P    A ++    A      G         + +
Sbjct: 622 FQIADTYYNEKKYQEAANRFQDLFTTYPNGSYAEQARYWYANCLAMLGNQAAFVEEKQNF 681

Query: 121 ITQYPESKNV 130
           +  YP S  V
Sbjct: 682 MRDYPNSSFV 691



 Score = 39.3 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 51/132 (38%), Gaps = 11/132 (8%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A+ + +  N+ KA EY  Q S    F    +      A   Y+  KYQ+AA+  ++  T 
Sbjct: 591 ALSYFRLGNYEKAREYNRQISDIAGFEEYGK---FQIADTYYNEKKYQEAANRFQDLFTT 647

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
           YP     +   Y      A +     +        ++     +  Y NS +V+       
Sbjct: 648 YPNGSYAEQARYWYANCLAMLGNQAAF--------VEEKQNFMRDYPNSSFVETLSSLDK 699

Query: 184 VGRNQLAAKEVE 195
             ++ LA K++E
Sbjct: 700 NLKSDLAKKKLE 711



 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 47/134 (35%), Gaps = 22/134 (16%)

Query: 139 MSYAQMIRDVPYDQRATKL-----MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
           +S++    D     R  K       LQ   + ++ Y +S         +   RNQ     
Sbjct: 19  LSFSGEREDFQRIDRLYKERNFDAALQQSVQYIKNYPSSS-------RILEMRNQ----- 66

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
             +G+ Y  + +Y  A  +F+ +L+         E    L   Y AL   D+ R  ++ I
Sbjct: 67  --VGKLYFIQKDYGKAREQFRAILSMEPSGSTRNETYYYLARIYAALGEQDQNRFALTQI 124

Query: 254 QERYPQGYWARYVE 267
           +   P   +     
Sbjct: 125 K---PSSSFYAKAH 135



 Score = 35.9 bits (82), Expect = 6.5,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 75/224 (33%), Gaps = 35/224 (15%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
             +   Y +  YE A+ ++++  + +A +                +SLL +A   ++   
Sbjct: 125 KPSSSFYAKAHYESAIQYMEKMKYQEAIQLLAVP--IHKKGDFYAESLLNTALAYFNQED 182

Query: 110 YQQAASLGEEYITQYP---ESKNVDYVYYLVGMSYAQMIRDVPYDQR---------ATKL 157
           +  +    ++Y+ +Y    + KN   V YL G    +  +     QR          +  
Sbjct: 183 FVSS----KKYLLEYSSVEQHKNRSLVEYLYGTMLYKENKLSDSIQRLEALVQQDSTSLY 238

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE-----IGRYYLKRGEYVAAIPR 212
             + +  ++E Y+N          +   +      E       IG  Y+ R +Y      
Sbjct: 239 AKKAILTLIEIYSNQGDAAKVEEKLLKLQGT---PEYNRAMTMIGDLYVSRQQY------ 289

Query: 213 FQLVLANYSDAEHA--EEAMARLVEAYVALALMDEAREVVSLIQ 254
            Q  L  Y+ +        +     +   L  + EA +    ++
Sbjct: 290 -QKALEMYAKSNQQKDPRLLYGKAYSLYKLNRLQEALQAFEQLR 332


>gi|298480594|ref|ZP_06998791.1| TPR domain-containing protein [Bacteroides sp. D22]
 gi|298273415|gb|EFI14979.1| TPR domain-containing protein [Bacteroides sp. D22]
          Length = 590

 Score = 44.3 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 63/198 (31%), Gaps = 36/198 (18%)

Query: 61  YEKAVLFL--KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           Y + ++ L  ++    KA     +    FP       SLL          KY    S   
Sbjct: 122 YSQGLVSLYQQQNELDKAVTLLEKMVTRFPSKQEPLFSLLDI---YSRQEKYNDVISTLN 178

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
               +  +++ +    + +   Y QM  D        K   Q +  +V+ Y         
Sbjct: 179 RLEKRLGKNEQLSMEKFRI---YLQMKDD--------KKAFQEIESLVQEYP-------- 219

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
              + +        +V +G  YL+ G+   A   +Q VLA   D      A+  +   Y 
Sbjct: 220 ---MDM------RYQVILGDVYLQNGKKQEAYDAYQKVLAIEPD---NPMALFSMASYYE 267

Query: 239 ALALMDEAREVVSLIQER 256
                +  ++ +  +   
Sbjct: 268 QTGQKELYQQQLDTLLLN 285


>gi|257463131|ref|ZP_05627532.1| TPR repeat-containing protein [Fusobacterium sp. D12]
          Length = 915

 Score = 44.3 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 24/70 (34%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           ++ A  +  E+ + +A   F      +P    A ++    A      G         + +
Sbjct: 620 FQIADTYYNEKKYQEAANRFQDLFTTYPNGSYAEQARYWYANCLAMLGNQAAFVEEKQNF 679

Query: 121 ITQYPESKNV 130
           +  YP S  V
Sbjct: 680 MRDYPNSSFV 689



 Score = 39.3 bits (91), Expect = 0.53,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 51/132 (38%), Gaps = 11/132 (8%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A+ + +  N+ KA EY  Q S    F    +      A   Y+  KYQ+AA+  ++  T 
Sbjct: 589 ALSYFRLGNYEKAREYNRQISDIAGFEEYGK---FQIADTYYNEKKYQEAANRFQDLFTT 645

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
           YP     +   Y      A +     +        ++     +  Y NS +V+       
Sbjct: 646 YPNGSYAEQARYWYANCLAMLGNQAAF--------VEEKQNFMRDYPNSSFVETLSSLDK 697

Query: 184 VGRNQLAAKEVE 195
             ++ LA K++E
Sbjct: 698 NLKSDLAKKKLE 709



 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 47/134 (35%), Gaps = 22/134 (16%)

Query: 139 MSYAQMIRDVPYDQRATKL-----MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
           +S++    D     R  K       LQ   + ++ Y +S         +   RNQ     
Sbjct: 17  LSFSGEREDFQRIDRLYKERNFDAALQQSVQYIKNYPSSS-------RILEMRNQ----- 64

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
             +G+ Y  + +Y  A  +F+ +L+         E    L   Y AL   D+ R  ++ I
Sbjct: 65  --VGKLYFIQKDYGKAREQFRAILSMEPSGSTRNETYYYLARIYAALGEQDQNRFALTQI 122

Query: 254 QERYPQGYWARYVE 267
           +   P   +     
Sbjct: 123 K---PSSSFYAKAH 133



 Score = 35.9 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 75/224 (33%), Gaps = 35/224 (15%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
             +   Y +  YE A+ ++++  + +A +                +SLL +A   ++   
Sbjct: 123 KPSSSFYAKAHYESAIQYMEKMKYQEAIQLLAVP--IHKKGDFYAESLLNTALAYFNQED 180

Query: 110 YQQAASLGEEYITQYP---ESKNVDYVYYLVGMSYAQMIRDVPYDQR---------ATKL 157
           +  +    ++Y+ +Y    + KN   V YL G    +  +     QR          +  
Sbjct: 181 FVSS----KKYLLEYSSVEQHKNRSLVEYLYGTMLYKENKLSDSIQRLEALVQQDSTSLY 236

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE-----IGRYYLKRGEYVAAIPR 212
             + +  ++E Y+N          +   +      E       IG  Y+ R +Y      
Sbjct: 237 AKKAILTLIEIYSNQGDAAKVEEKLLKLQGT---PEYNRAMTMIGDLYVSRQQY------ 287

Query: 213 FQLVLANYSDAEHA--EEAMARLVEAYVALALMDEAREVVSLIQ 254
            Q  L  Y+ +        +     +   L  + EA +    ++
Sbjct: 288 -QKALEMYAKSNQQKDPRLLYGKAYSLYKLNRLQEALQAFEQLR 330


>gi|307718665|ref|YP_003874197.1| TPR domain-containing protein [Spirochaeta thermophila DSM 6192]
 gi|306532390|gb|ADN01924.1| TPR domain protein [Spirochaeta thermophila DSM 6192]
          Length = 654

 Score = 44.3 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 27/215 (12%), Positives = 70/215 (32%), Gaps = 40/215 (18%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYS 106
           +  +       +++ +      ++++ +A E +     ++  F     ++    A   +S
Sbjct: 13  VSPLAGEETSLQLFRQGEEARIQEDYHRAIELYQQAIQKNPAF----VQAYKGLAEAYFS 68

Query: 107 AGKYQQAASLGEEYITQYPESKN--VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
            G+Y+ A +  E+  +  P S +  + Y   L+ +                +   +    
Sbjct: 69  LGQYEVALAGAEKAKSLDPRSTDNHLLYARCLLAL-------------GRLEEAERIYRD 115

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           I+ R   +                     + I    L RG+  +A+  ++  L  + +  
Sbjct: 116 ILSREPQNVEAG-----------------MGIAELSLARGQVASALREYERTLRMFPE-- 156

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
             ++ +  L   Y      D+A   +      YP 
Sbjct: 157 -HKKILTILAFLYEYRGERDKAASYLEEALRLYPS 190



 Score = 42.8 bits (100), Expect = 0.055,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 41/109 (37%), Gaps = 24/109 (22%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           G++Q+A    + ++   P+S+     +YL G+   ++ R         +  L+    ++E
Sbjct: 240 GRFQEALDHLDGFLGARPDSREG---WYLKGVILDRLDR--------PEESLRAFREVLE 288

Query: 168 RYTNSPYVKGARFYVTV--------GRNQLAAKEVEIGR-----YYLKR 203
           RY +    + A   + +         R   A       R     +Y +R
Sbjct: 289 RYPDDEVARYAMERILLERFPVSAPERRAAAGYHFTRAREYAEKFYFRR 337



 Score = 39.3 bits (91), Expect = 0.57,   Method: Composition-based stats.
 Identities = 49/223 (21%), Positives = 79/223 (35%), Gaps = 30/223 (13%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCSRD 86
              A C L     + +  +Y D ++      E     A L L     + A   + +  R 
Sbjct: 94  LLYARCLLALGRLEEAERIYRDILSREPQNVEAGMGIAELSLARGQVASALREYERTLRM 153

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
           FP     +K L + AF+    G+  +AAS  EE +  YP       V+ L   S+   +R
Sbjct: 154 FPEH---KKILTILAFLYEYRGERDKAASYLEEALRLYPSDPE---VHLLAASSH---LR 204

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPY----VKGARFYVTVGRNQLAAKEVEIGR---- 198
              +D  A +   + +  + E    + Y    V   +       + L        R    
Sbjct: 205 KEEWD-EAEREARRAL-TLDENAVEASYLLAQVATGKGRFQEALDHLDG--FLGARPDSR 260

Query: 199 --YYLK------RGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
             +YLK            ++  F+ VL  Y D E A  AM R+
Sbjct: 261 EGWYLKGVILDRLDRPEESLRAFREVLERYPDDEVARYAMERI 303



 Score = 38.6 bits (89), Expect = 0.85,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 68/228 (29%), Gaps = 44/228 (19%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK--SLLMSAFVQYSAGKYQQAASLG 117
           +Y + +L L      +A   +       P    A    + L  A      G+   A    
Sbjct: 95  LYARCLLAL--GRLEEAERIYRDILSREPQNVEAGMGIAELSLA-----RGQVASALREY 147

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           E  +  +PE K +     L  +++    R    D         Y+   +  Y + P V  
Sbjct: 148 ERTLRMFPEHKKI-----LTILAFLYEYRG-ERD-----KAASYLEEALRLYPSDPEV-- 194

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRG----------EYVAA-----IPRFQLVLANYSD 222
              ++    + L  +E +      +R            Y+ A       RFQ  L +   
Sbjct: 195 ---HLLAASSHLRKEEWDEAEREARRALTLDENAVEASYLLAQVATGKGRFQEALDHLDG 251

Query: 223 A----EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
                  + E           L   +E+      + ERYP    ARY 
Sbjct: 252 FLGARPDSREGWYLKGVILDRLDRPEESLRAFREVLERYPDDEVARYA 299


>gi|256838586|ref|ZP_05544096.1| TPR domain-containing protein [Parabacteroides sp. D13]
 gi|256739505|gb|EEU52829.1| TPR domain-containing protein [Parabacteroides sp. D13]
          Length = 1186

 Score = 44.3 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 58/177 (32%), Gaps = 26/177 (14%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
                  +    E    ++P++++    YY V   Y   ++        T L  +Y +++
Sbjct: 607 KLEDIPLSVEAFENLERRFPDNEHRLESYYQV---YLMALKT-----GNTALATEYKNKL 658

Query: 166 VERYTNSPYVKGAR--------FYVTVGRNQLAAKEVEIGRY--YLKRG-EYVAAIPRFQ 214
           +  +  S Y               + V ++      +    Y  YL+    YV     F+
Sbjct: 659 MNAFPESDYAVAVADPNYEYNIRMMDVVQDS-----IYQATYDRYLESDTAYV--RKSFR 711

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
            V   Y  A    + M     +YV     +  +  +  + E+YP          ++K
Sbjct: 712 YVSEKYPLATLMPKFMFLDALSYVQAGDAEGFKNALKALVEKYPNADVTELAGEMLK 768


>gi|237720355|ref|ZP_04550836.1| TPR domain-containing protein [Bacteroides sp. 2_2_4]
 gi|229450106|gb|EEO55897.1| TPR domain-containing protein [Bacteroides sp. 2_2_4]
          Length = 590

 Score = 44.3 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 63/198 (31%), Gaps = 36/198 (18%)

Query: 61  YEKAVLFL--KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           Y + ++ L  ++    KA     +    FP       SLL          KY    S   
Sbjct: 122 YSQGLVSLYQQQNELDKAVTLLEKMVTRFPSKQEPLFSLLDI---YSRQEKYNDVISTLN 178

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
               +  +++ +    + +   Y QM  D        K   Q +  +V+ Y         
Sbjct: 179 RLEKRLGKNEQLSMEKFRI---YLQMKDD--------KKAFQEIESLVQEYP-------- 219

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
              + +        +V +G  YL+ G+   A   +Q VLA   D      A+  +   Y 
Sbjct: 220 ---MDM------RYQVILGDVYLQNGKKQEAYDAYQKVLAVEPD---NPMALFSMASYYE 267

Query: 239 ALALMDEAREVVSLIQER 256
                +  ++ +  +   
Sbjct: 268 QTGQKELYQQQLDTLLLN 285


>gi|326335179|ref|ZP_08201376.1| tetratricopeptide (TPR) domain protein [Capnocytophaga sp. oral
           taxon 338 str. F0234]
 gi|325692709|gb|EGD34651.1| tetratricopeptide (TPR) domain protein [Capnocytophaga sp. oral
           taxon 338 str. F0234]
          Length = 280

 Score = 44.3 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 43/131 (32%), Gaps = 10/131 (7%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
            +  D  +        Y   + +++   + +A  + ++ S   P   ++  +L       
Sbjct: 144 KIIKDYSSSKAANVAYYSAGMAYMQLNKYKEAVSHLDKFSSKDP--ILSALALGNIGDAF 201

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
               +  +A    ++ I    +S N      L    Y      V  +Q+  K  L+Y  R
Sbjct: 202 VQLKQLNEATDYYKKAIN---KSDNS-----LTAPIYLNKAAQVAVEQKNYKQALEYFER 253

Query: 165 IVERYTNSPYV 175
           I   +  S   
Sbjct: 254 IKNDFPKSEEA 264


>gi|295086300|emb|CBK67823.1| Tetratricopeptide repeat. [Bacteroides xylanisolvens XB1A]
          Length = 590

 Score = 44.3 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 63/198 (31%), Gaps = 36/198 (18%)

Query: 61  YEKAVLFL--KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           Y + ++ L  ++    KA     +    FP       SLL          KY    S   
Sbjct: 122 YSQGLVSLYQQQNELDKAVTLLEKMVTRFPSKQEPLFSLLDI---YSRQEKYNDVISTLN 178

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
               +  +++ +    + +   Y QM  D        K   Q +  +V+ Y         
Sbjct: 179 RLEKRLGKNEQLSMEKFRI---YLQMKDD--------KKAFQEIESLVQEYP-------- 219

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
              + +        +V +G  YL+ G+   A   +Q VLA   D      A+  +   Y 
Sbjct: 220 ---MDM------RYQVILGDVYLQNGKKQEAYDAYQKVLAVEPD---NPMALFSMASYYE 267

Query: 239 ALALMDEAREVVSLIQER 256
                +  ++ +  +   
Sbjct: 268 QTGQKELYQQQLDTLLLN 285


>gi|254503302|ref|ZP_05115453.1| tol-pal system protein YbgF, putative [Labrenzia alexandrii DFL-11]
 gi|222439373|gb|EEE46052.1| tol-pal system protein YbgF, putative [Labrenzia alexandrii DFL-11]
          Length = 270

 Score = 44.3 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 16/133 (12%), Positives = 43/133 (32%), Gaps = 14/133 (10%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           S+ D  +  +      R  Y++A       +++ A   F      +P   +A  +     
Sbjct: 130 STDDDQIAGIIGSGDPRTDYDRAYSMAVNGDYAAAEAGFRTFLESYPDNQLAANAQYWLG 189

Query: 102 FVQYSAGKYQQAASLGEEYITQ---YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
               +   +++A    + ++     +P +         +G+S              T + 
Sbjct: 190 ESLLAQQNFREA---ADAFLKTYRDHPGNSKSPDSLLKLGVSL--------RGLGETDVA 238

Query: 159 LQYMSRIVERYTN 171
               S ++ ++ N
Sbjct: 239 CATFSELLSKFPN 251



 Score = 42.8 bits (100), Expect = 0.053,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 30/101 (29%), Gaps = 8/101 (7%)

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
             A+     G Y  A +    ++  YP+++      Y +G S           Q+  +  
Sbjct: 150 DRAYSMAVNGDYAAAEAGFRTFLESYPDNQLAANAQYWLGESLLA--------QQNFREA 201

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
                +    +  +     +   + V    L   +V    +
Sbjct: 202 ADAFLKTYRDHPGNSKSPDSLLKLGVSLRGLGETDVACATF 242



 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 13/103 (12%), Positives = 33/103 (32%), Gaps = 14/103 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                    +E Y ++     A++++    + LA               +  A   F   
Sbjct: 163 AAEAGFRTFLESYPDNQLAANAQYWLGE--SLLAQ------------QNFREAADAFLKT 208

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
             ++     + +++ +L  +   L   D A    S +  ++P 
Sbjct: 209 YRDHPGNSKSPDSLLKLGVSLRGLGETDVACATFSELLSKFPN 251


>gi|301307732|ref|ZP_07213689.1| TPR domain protein [Bacteroides sp. 20_3]
 gi|300834406|gb|EFK65019.1| TPR domain protein [Bacteroides sp. 20_3]
          Length = 1186

 Score = 44.3 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 58/177 (32%), Gaps = 26/177 (14%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
                  +    E    ++P++++    YY V   Y   ++        T L  +Y +++
Sbjct: 607 KLEDIPLSVEAFENLERRFPDNEHRLESYYQV---YLMALKT-----GNTALATEYKNKL 658

Query: 166 VERYTNSPYVKGAR--------FYVTVGRNQLAAKEVEIGRY--YLKRG-EYVAAIPRFQ 214
           +  +  S Y               + V ++      +    Y  YL+    YV     F+
Sbjct: 659 MNAFPESDYAVAVADPNYEYNIRMMDVVQDS-----IYQATYDRYLESDTAYV--RKSFR 711

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
            V   Y  A    + M     +YV     +  +  +  + E+YP          ++K
Sbjct: 712 YVSEKYPLATLMPKFMFLDALSYVQAGDAEGFKNALKALVEKYPNADVTELAGEMLK 768


>gi|217977948|ref|YP_002362095.1| TPR repeat-containing protein [Methylocella silvestris BL2]
 gi|217503324|gb|ACK50733.1| TPR repeat-containing protein [Methylocella silvestris BL2]
          Length = 290

 Score = 44.3 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 49/136 (36%), Gaps = 14/136 (10%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           T       + ++A+  ++ +N+++A    ++     P    A  +    A V++ +    
Sbjct: 165 TPSDTAALIMQRAMASVEAKNYTQALTLLDRLVAIAP--AWAE-AWNERATVRFMSEDAD 221

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            A +  ++ +   P          L+GM        +       K  L+   + +  Y  
Sbjct: 222 GAMADIDKVLRLEPRHFGA-----LMGMGVILQRAGLD------KRALEAFEKALAVYPA 270

Query: 172 SPYVKGARFYVTVGRN 187
            P +K +   +++  N
Sbjct: 271 QPGLKESVEKLSLDVN 286


>gi|313683216|ref|YP_004060954.1| hypothetical protein [Sulfuricurvum kujiense DSM 16994]
 gi|313156076|gb|ADR34754.1| Tetratricopeptide TPR_1 repeat-containing protein [Sulfuricurvum
           kujiense DSM 16994]
          Length = 436

 Score = 44.3 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 27/82 (32%), Gaps = 17/82 (20%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK--- 109
           D    +E+Y+KA      Q++ +AY      +   P              + +  G+   
Sbjct: 20  DTLTMQELYQKANAAYAAQSYQEAYPLLEALNDQAPENPE----------INFLMGRCAL 69

Query: 110 ----YQQAASLGEEYITQYPES 127
               Y +A +  +  +   P  
Sbjct: 70  ELKLYDEAIAAFDRVLIINPNH 91


>gi|182419429|ref|ZP_02950681.1| TPR-repeat-containing protein [Clostridium butyricum 5521]
 gi|237666848|ref|ZP_04526833.1| TPR repeat protein [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182376760|gb|EDT74332.1| TPR-repeat-containing protein [Clostridium butyricum 5521]
 gi|237658047|gb|EEP55602.1| TPR repeat protein [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 425

 Score = 44.3 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 45/126 (35%), Gaps = 21/126 (16%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS------AGKYQ 111
            + YE  V +    N++ A     +  +         KS L    V Y        G   
Sbjct: 308 SKFYEYGVWYFNNGNYNSAKVELEKAYK------YCDKSDLKEHIVFYKGSTASQLGDNS 361

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           +A  L +EY + YP+   ++ V Y + +      +++           +Y   +V  Y N
Sbjct: 362 EALKLYKEYYSLYPKGAYIEGVLYELALLTNTTNKNMGK---------EYARELVNNYPN 412

Query: 172 SPYVKG 177
           S Y+  
Sbjct: 413 SLYIND 418


>gi|145532302|ref|XP_001451912.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124419578|emb|CAK84515.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1033

 Score = 44.3 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 24/174 (13%), Positives = 56/174 (32%), Gaps = 32/174 (18%)

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
            +A  S L      ++  K ++A    + Y  +Y          Y+ G+ +         
Sbjct: 116 EIATSSELDEGKRLFTENKVEEALKNFQNYQNKYGLHPE---ALYISGLCFM------TL 166

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-------------- 196
           DQ   +  ++  S +++ +            +++ +N L  + + +              
Sbjct: 167 DQE--EKYIEQFSTLIKTFPRFKRTSYMYLALSLKKNNLINEAIHVISQGINHFNRYFEA 224

Query: 197 ----GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
                + +LK   Y  AI  FQ  +    +          L + Y  +  + +A
Sbjct: 225 LIFRAKLFLKIKNYEKAIKDFQSAIQVNPNKSICY---VGLSDCYKQINQIQQA 275


>gi|325263638|ref|ZP_08130372.1| putative tetratricopeptide repeat [Clostridium sp. D5]
 gi|324031347|gb|EGB92628.1| putative tetratricopeptide repeat [Clostridium sp. D5]
          Length = 474

 Score = 44.3 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 23/80 (28%), Gaps = 1/80 (1%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
                +Y      L   N+  A +  ++  R          +LL         G    A+
Sbjct: 352 SACESLYSGGTASLDVANYDTAIDSLSKVVRMNEGYDDGG-ALLNLGIAYMRNGDNDNAS 410

Query: 115 SLGEEYITQYPESKNVDYVY 134
              +  I  YP+++      
Sbjct: 411 KYLKRVIELYPDTERAQEAQ 430


>gi|291521940|emb|CBK80233.1| hypothetical protein CC1_14520 [Coprococcus catus GD/7]
          Length = 522

 Score = 44.3 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 11/89 (12%), Positives = 25/89 (28%), Gaps = 9/89 (10%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQ 104
           +   T       +Y        ++++  A +   +       + +      ++       
Sbjct: 369 IKEATKSSVTETLYANGKDSFDKKDYVGAIDGMTKVLRMDDSYSY------AVFYMGRSY 422

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYV 133
              G    AA   +  I  YP S  +D  
Sbjct: 423 QLLGDTGNAAGYYKRLIQSYPNSDLIDDA 451


>gi|296328452|ref|ZP_06870973.1| conserved hypothetical protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
 gi|296154418|gb|EFG95215.1| conserved hypothetical protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
          Length = 417

 Score = 44.3 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 7/65 (10%)

Query: 214 QLVLANYSDAEHAE-------EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
           ++ + N+  +   E       E    +  +Y  L    E  + + L+++ +P   WA+  
Sbjct: 350 RVAIENFKKSLSTEKIQDKKPEIYYNIASSYAKLGNKVEVTKYLRLLKQEFPNSEWAKKS 409

Query: 267 ETLVK 271
           E L K
Sbjct: 410 EALTK 414


>gi|292493243|ref|YP_003528682.1| PEP-CTERM system TPR-repeat lipoprotein [Nitrosococcus halophilus
           Nc4]
 gi|291581838|gb|ADE16295.1| PEP-CTERM system TPR-repeat lipoprotein [Nitrosococcus halophilus
           Nc4]
          Length = 930

 Score = 44.3 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 23/179 (12%), Positives = 69/179 (38%), Gaps = 33/179 (18%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
            +   + ++  L +++    KA   F +  +  P +    + ++  A  Q+ AG   ++ 
Sbjct: 712 EHPEVLAQEGWLAMRQNQPQKAVAAFKEALKHSPTS----QIIVNLALAQFQAGNQDRSL 767

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
           +  E+++ ++P  +++    Y +   Y  + ++        +  +   +++VE+  N+  
Sbjct: 768 ATLEDWLKKHP--EDM-LAQYNLANLYLALKQE--------QEAVSAFAKVVEQAPNN-- 814

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
                       N LA        + L++ +   A+   +  L    ++    + +  L
Sbjct: 815 --------VTALNNLA--------WLLRKDDPAKALTYAERALDIAPNSPPVMDTLGML 857


>gi|194291771|ref|YP_002007678.1| hypothetical protein RALTA_B1012 [Cupriavidus taiwanensis LMG
           19424]
 gi|193225675|emb|CAQ71621.1| conserved hypothetical protein; partial TRP motif [Cupriavidus
           taiwanensis LMG 19424]
          Length = 209

 Score = 44.3 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 28/97 (28%), Gaps = 13/97 (13%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
               +     L G    +               ++   +A   L      +A   F Q +
Sbjct: 14  LAVLASTAALLAGCATSN------PGPQSDESFKQSMSEAEAALASGQREQAINLFEQIA 67

Query: 85  RDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++ P      +R + +      + A  Y QA    EE
Sbjct: 68  KNNPTREEPWSRMAQIE-----FGAEHYPQAIVAAEE 99


>gi|158337251|ref|YP_001518426.1| Slt family transglycosylase [Acaryochloris marina MBIC11017]
 gi|158307492|gb|ABW29109.1| transglycosylase, SLT family [Acaryochloris marina MBIC11017]
          Length = 722

 Score = 44.3 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 75/230 (32%), Gaps = 29/230 (12%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSA 107
             T     +  Y      +     ++A ++       +P   + +A    ++ A  Q  A
Sbjct: 77  QGTAQEQNQARYVLTADLINLGQGAEALQWLEGLEARYPLLGSHIA----VLQAEAQTLA 132

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMS----YAQMIRDVPYDQRATKLMLQYMS 163
           G+ +QA    +  I  YP+        +++G      + Q I D P   +  K+ ++ + 
Sbjct: 133 GQTEQATKTWQRIIADYPQEPAAAEALFVLGQQKPELWQQAIADFPAHPKTVKIAVEQLK 192

Query: 164 RIVERYT-----------NSPYVKGARFYVTVGRNQLAAKEVEIGRY-YLKRGEYVAAIP 211
           +  ++              + Y           + QL   + +I  + Y ++  Y     
Sbjct: 193 KKPKQLPLLMLIAEHGLFLTNYGDYLTQLTKEFKGQLKPADWQIIAFGYWEKQLYK---- 248

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             +  LA Y+ A    +   R            +AR     +   YPQ  
Sbjct: 249 --EGALA-YAQAPQTSQTAYRGARGLQLGGEKKQARAAYQKMIAAYPQAK 295


>gi|119775219|ref|YP_927959.1| hypothetical protein Sama_2084 [Shewanella amazonensis SB2B]
 gi|119767719|gb|ABM00290.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
          Length = 254

 Score = 44.3 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 46/126 (36%), Gaps = 9/126 (7%)

Query: 61  YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           YE+A+   LKE+ + +A   F    + +P +     +      + Y+  +  +A      
Sbjct: 137 YEQAINLVLKERKYDEAIAAFRSFVKKYPGSNYTDNANYWLGQLLYNKNELDEARGAFTV 196

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            + +YP+S         +G+   +    V               ++++ Y NS   + A+
Sbjct: 197 VVEKYPDSSKRGDSLVKLGLIAEKKGDTVG--------AKNLYRKVIKEYANSAAARIAQ 248

Query: 180 FYVTVG 185
             +   
Sbjct: 249 QQLNAL 254



 Score = 43.2 bits (101), Expect = 0.043,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 45/129 (34%), Gaps = 16/129 (12%)

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV-TVGRNQLAAKEVEIGR 198
           +  +   ++   +R     +      V++Y  S Y   A +++  +  N     E++   
Sbjct: 135 ASYEQAINLVLKERKYDEAIAAFRSFVKKYPGSNYTDNANYWLGQLLYN---KNELDEA- 190

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
               RG        F +V+  Y D+    +++ +L            A+ +   + + Y 
Sbjct: 191 ----RGA-------FTVVVEKYPDSSKRGDSLVKLGLIAEKKGDTVGAKNLYRKVIKEYA 239

Query: 259 QGYWARYVE 267
               AR  +
Sbjct: 240 NSAAARIAQ 248



 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 2/71 (2%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           LK  +Y  AI  F+  +  Y  + + + A   L +       +DEAR   +++ E+YP  
Sbjct: 145 LKERKYDEAIAAFRSFVKKYPGSNYTDNANYWLGQLLYNKNELDEARGAFTVVVEKYPDS 204

Query: 261 YWARYVETLVK 271
              +  ++LVK
Sbjct: 205 S--KRGDSLVK 213


>gi|237716625|ref|ZP_04547106.1| TPR domain-containing protein [Bacteroides sp. D1]
 gi|262405400|ref|ZP_06081950.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294647632|ref|ZP_06725200.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a]
 gi|294809152|ref|ZP_06767870.1| tetratricopeptide repeat protein [Bacteroides xylanisolvens SD CC
           1b]
 gi|229442608|gb|EEO48399.1| TPR domain-containing protein [Bacteroides sp. D1]
 gi|262356275|gb|EEZ05365.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292637020|gb|EFF55470.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a]
 gi|294443706|gb|EFG12455.1| tetratricopeptide repeat protein [Bacteroides xylanisolvens SD CC
           1b]
          Length = 590

 Score = 44.3 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 63/198 (31%), Gaps = 36/198 (18%)

Query: 61  YEKAVLFL--KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           Y + ++ L  ++    KA     +    FP       SLL          KY    S   
Sbjct: 122 YSQGLVSLYQQQNELDKAVTLLEKMVTRFPSKQEPLFSLLDI---YSRQEKYNDVISTLN 178

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
               +  +++ +    + +   Y QM  D        K   Q +  +V+ Y         
Sbjct: 179 RLEKRLGKNEQLSMEKFRI---YLQMKDD--------KKAFQEIESLVQEYP-------- 219

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
              + +        +V +G  YL+ G+   A   +Q VLA   D      A+  +   Y 
Sbjct: 220 ---MDM------RYQVILGDVYLQNGKKQEAYDAYQKVLAVEPD---NPMALFSMASYYE 267

Query: 239 ALALMDEAREVVSLIQER 256
                +  ++ +  +   
Sbjct: 268 QTGQKELYQQQLDTLLLN 285


>gi|188994836|ref|YP_001929088.1| TPR domain protein [Porphyromonas gingivalis ATCC 33277]
 gi|188594516|dbj|BAG33491.1| TPR domain protein [Porphyromonas gingivalis ATCC 33277]
          Length = 818

 Score = 44.3 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 72/193 (37%), Gaps = 19/193 (9%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVA 93
           GW +++ +D       D ++    Y++   + ++ ++ +A + F++    +  + +A  +
Sbjct: 107 GWYKKAIKDYSQAIELDDKFAHAYYDRGNAYCEKGSYEEAIKDFSKAIELNDKYTYAYHS 166

Query: 94  RKSLLMSAFV---QYSA--GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
           R      A+     Y      Y QA  L  +++  Y   + +   Y+  G SY + I+D 
Sbjct: 167 R----GIAYCEKGSYKEAIKDYSQAIELDGKFVHAY-HGRGI--AYFKKG-SYEEAIKDY 218

Query: 149 PYDQRATKLMLQYMS-RIVERYTNSPYVKGARF--YVTVGRNQLAAKEVEIGRYYLKRGE 205
                     +     R +  +    Y +  +          + A    + G  Y ++G 
Sbjct: 219 SQAIELDGKFVHAYHGRGIAYFKKGLYEEAIKDYSKAIELDGKFAHAYYDRGNAYCEKGS 278

Query: 206 YVAAIPRFQLVLA 218
           Y  AI  +   + 
Sbjct: 279 YEEAIKDYSKAIE 291



 Score = 42.4 bits (99), Expect = 0.060,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 83/242 (34%), Gaps = 54/242 (22%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFP 88
            C +VG   ++ +D       D ++    + + + + K+ ++ +A + ++   +    + 
Sbjct: 34  GCCIVGSYEEAIKDYSKAIELDDKFVHAYHGRGIAYFKKGSYEEAIKDYSQAIELDDKYA 93

Query: 89  ------FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
                     ++K     A        Y QA  L +++           + YY  G +Y 
Sbjct: 94  PAYHGRGNAYSKKGWYKKA-----IKDYSQAIELDDKF----------AHAYYDRGNAYC 138

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR--------FYVTVGRNQLAAKEV 194
           +          + +  ++  S+ +E      Y   +R         Y    ++   A E+
Sbjct: 139 EK--------GSYEEAIKDFSKAIELNDKYTYAYHSRGIAYCEKGSYKEAIKDYSQAIEL 190

Query: 195 EIGRY----------YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
           + G++          Y K+G Y  AI  +   +    D +    A      AY    L +
Sbjct: 191 D-GKFVHAYHGRGIAYFKKGSYEEAIKDYSQAIEL--DGKFVH-AYHGRGIAYFKKGLYE 246

Query: 245 EA 246
           EA
Sbjct: 247 EA 248


>gi|116329905|ref|YP_799623.1| TPR repeat-containing protein [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116123594|gb|ABJ74865.1| TPR-repeat-containing protein [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 1197

 Score = 44.3 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 51/147 (34%), Gaps = 12/147 (8%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVAR 94
            G ++ +  +       D   +   Y   ++   +  +++A   F +  +  P F+    
Sbjct: 757 SGNKKLAKEEFETAMQQDSANELAPYNIGIILFNDNLYNEAIAIFKEIIQKNPEFSD--- 813

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP-YDQR 153
            +    +++ Y  G  +QA     + +      KN      L G+      +     +  
Sbjct: 814 -AHYQISYIYYKRGDLEQAEKEIRKALDLERNEKN------LFGLIRILSEQKTKIANPA 866

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARF 180
             K +L+    + E++  SP+   A  
Sbjct: 867 VKKEILELGRELAEKFPASPHATQAER 893


>gi|116329495|ref|YP_799215.1| TPR repeat-containing protein [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116122239|gb|ABJ80282.1| TPR-repeat-containing protein [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
          Length = 1197

 Score = 44.3 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 51/147 (34%), Gaps = 12/147 (8%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVAR 94
            G ++ +  +       D   +   Y   ++   +  +++A   F +  +  P F+    
Sbjct: 757 SGNKKLAKEEFETAMQQDSANELAPYNIGIILFNDNLYNEAIAIFKEIIQKNPEFSD--- 813

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP-YDQR 153
            +    +++ Y  G  +QA     + +      KN      L G+      +     +  
Sbjct: 814 -AHYQISYIYYKRGDLEQAEKEIRKALDLERNEKN------LFGLIRILSEQKTKIANPA 866

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARF 180
             K +L+    + E++  SP+   A  
Sbjct: 867 VKKEILELGRELAEKFPASPHATQAER 893



 Score = 35.9 bits (82), Expect = 5.5,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 45/138 (32%), Gaps = 25/138 (18%)

Query: 64  AVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
               +    +  A + F        D+      ++++   A V Y  G Y+++ S+ E+ 
Sbjct: 279 GNARILTGEYEAALKAFESSLALKSDY------QEAISGIAAVHYKTGNYRKSVSVLEKS 332

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           I+ +P +       Y         +             L Y +R  E   +S + +    
Sbjct: 333 ISLFPNN-----AIYQ------NQMGLNMKALGEPAKALVYFTRAREL--DSAFAEPVTN 379

Query: 181 YVTVGRNQLAAKEVEIGR 198
            V +    +A    +  R
Sbjct: 380 LVFLL---IAENRYKAAR 394


>gi|193214646|ref|YP_001995845.1| hypothetical protein Ctha_0933 [Chloroherpeton thalassium ATCC
           35110]
 gi|193088123|gb|ACF13398.1| hypothetical protein Ctha_0933 [Chloroherpeton thalassium ATCC
           35110]
          Length = 628

 Score = 44.3 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 12/130 (9%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK--YQQAASL 116
           + + +    + +   + A +  ++ S  + ++ ++  +L                +A   
Sbjct: 503 QAFSRVKKLIAQNKRTAAADSLSEWSARYSYSSLSDHALFEKG---TLEADIAPARAVQT 559

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            E+ I  +PES   D        S  ++ +   +        + Y  ++++ Y  S YVK
Sbjct: 560 FEKIIADFPESFFAD-------KSMFELGQLFEHTLNDNARAMSYYEKLIQNYPKSLYVK 612

Query: 177 GARFYVTVGR 186
            AR  +   R
Sbjct: 613 DARARLRALR 622



 Score = 39.7 bits (92), Expect = 0.43,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 59/197 (29%), Gaps = 47/197 (23%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +   A L   ++ +++A   +           VA++++L  A  +               
Sbjct: 284 LLNFANLAFAQKKYNEAVSAYESARARSTSGSVAQQAILGKAKAR--------------- 328

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
                              M+ A++  D    Q+ T        + VE Y +SP +    
Sbjct: 329 -------------------MALAKLSPDSASTQKLTDEAYSAYLQFVETYPSSPLMPRVL 369

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             +          E+          + + A+   Q +   YS      +A        V 
Sbjct: 370 LKIAEVE----KNELH---------QPLIAMQTLQKLTKKYSSLPEVYQAEYDKASILVL 416

Query: 240 LALMDEAREVVSLIQER 256
              + +A ++++ + E 
Sbjct: 417 QNDLPQAAQILTALSEN 433


>gi|121635128|ref|YP_975373.1| putative periplasmic protein [Neisseria meningitidis FAM18]
 gi|120866834|emb|CAM10592.1| putative periplasmic protein [Neisseria meningitidis FAM18]
 gi|325132380|gb|EGC55073.1| putative lipoprotein [Neisseria meningitidis M6190]
 gi|325136517|gb|EGC59121.1| periplasmic protein [Neisseria meningitidis M0579]
 gi|325138439|gb|EGC61005.1| putative lipoprotein [Neisseria meningitidis ES14902]
 gi|325198573|gb|ADY94029.1| hypothetical protein NMBG2136_1330 [Neisseria meningitidis G2136]
          Length = 238

 Score = 44.3 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 43/125 (34%), Gaps = 11/125 (8%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S   V   + +Y +A+   K   FS A               +A++S+ +    +   G 
Sbjct: 112 SAHTVETAQNLYNQALKHYKSGRFSAAASLLKGADGGD-GGSIAQRSMYLLLQSRARMGN 170

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVER 168
            +    +G  Y  ++ +S       + +G    +   +D+                +++ 
Sbjct: 171 CESVIEIGGRYANRFKDSPTAPEAMFKIGECQYRLQQKDIAR---------ATWRSLIQA 221

Query: 169 YTNSP 173
           Y +SP
Sbjct: 222 YPSSP 226



 Score = 35.9 bits (82), Expect = 5.6,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 18/43 (41%)

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + D+  A EAM ++ E    L   D AR     + + YP   
Sbjct: 184 RFKDSPTAPEAMFKIGECQYRLQQKDIARATWRSLIQAYPSSP 226


>gi|15384002|gb|AAK96080.1|AF393466_14 Zn-dependent metalloprotease [uncultured crenarchaeote 74A4]
          Length = 509

 Score = 44.3 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 34/79 (43%), Gaps = 11/79 (13%)

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
            K+ L  A + +  G+Y+QA  + E+ +   P    +     +  ++++    DV     
Sbjct: 45  EKTELDKAKIHFVNGEYKQAVRIYEQLLENNPNDTAI---LKMKAIAFSNSNDDVN---- 97

Query: 154 ATKLMLQYMSRIVERYTNS 172
                L+   +I+++  NS
Sbjct: 98  ----SLKDFYKIIQQDPNS 112


>gi|118353701|ref|XP_001010116.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89291883|gb|EAR89871.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 1875

 Score = 44.3 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 63/188 (33%), Gaps = 24/188 (12%)

Query: 74   SKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
             +A +Y+ +     P  F             + Y   KY +A +  ++ I   P+S +  
Sbjct: 931  EEAIKYYKKAIEIDPNHFNT-----QFNLGLLYYQEQKYDEALTYFQKVIEINPKSPDS- 984

Query: 132  YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV--KGARFYVTVGRNQL 189
              Y  +G+ Y         D+      L+Y  + +             A  Y+     + 
Sbjct: 985  --YNNIGLIYY--------DKDMITEALEYFKKALHVDPQYQQAHHNSAVIYLQEINPKF 1034

Query: 190  AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-RE 248
                + +G   +K+      I  F+ ++     + + +    +L   Y    + +EA + 
Sbjct: 1035 LESLINLGDICVKQNLLDEGIECFKKIIQIDPYSHYDQ---FQLALIYQKKYMNEEAVKA 1091

Query: 249  VVSLIQER 256
               +I+  
Sbjct: 1092 YKKVIKLN 1099



 Score = 38.9 bits (90), Expect = 0.72,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 22/68 (32%), Gaps = 12/68 (17%)

Query: 65   VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY--QQAASLGEEYIT 122
               L E       E F +  +  P++    +  L   +      KY  ++A    ++ I 
Sbjct: 1048 QNLLDEG-----IECFKKIIQIDPYSHY-DQFQLALIY----QKKYMNEEAVKAYKKVIK 1097

Query: 123  QYPESKNV 130
              P+    
Sbjct: 1098 LNPQHTKA 1105


>gi|19703800|ref|NP_603362.1| hypothetical protein FN0465 [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|19713946|gb|AAL94661.1| Hypothetical protein FN0465 [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
          Length = 410

 Score = 44.3 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 7/65 (10%)

Query: 214 QLVLANYSDAEHAE-------EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
           ++ + N+  +   E       E    +  +Y  L    E  + + L+++ +P   WA+  
Sbjct: 343 RVAIENFKKSLSTEKIQDKKPEIYYNIASSYAKLGNKVEVTKYLRLLKQEFPNSEWAKKS 402

Query: 267 ETLVK 271
           E L K
Sbjct: 403 EALTK 407


>gi|125974865|ref|YP_001038775.1| TPR repeat-containing protein [Clostridium thermocellum ATCC 27405]
 gi|256003879|ref|ZP_05428866.1| Tetratricopeptide domain protein [Clostridium thermocellum DSM
           2360]
 gi|281418669|ref|ZP_06249688.1| TPR repeat-containing protein [Clostridium thermocellum JW20]
 gi|125715090|gb|ABN53582.1| TPR repeat domain containing protein [Clostridium thermocellum ATCC
           27405]
 gi|255992217|gb|EEU02312.1| Tetratricopeptide domain protein [Clostridium thermocellum DSM
           2360]
 gi|281407753|gb|EFB38012.1| TPR repeat-containing protein [Clostridium thermocellum JW20]
 gi|316939076|gb|ADU73110.1| TPR repeat-containing protein [Clostridium thermocellum DSM 1313]
          Length = 246

 Score = 44.3 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 32/71 (45%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            K  +Y  A+    L L  Y +  +A++    +  +   +   D+A+E ++ I   YP  
Sbjct: 171 YKNKKYSEAVKSLNLSLKLYDEDYYADDCYYFIAYSEYNIGNYDKAKEALNTIINNYPDS 230

Query: 261 YWARYVETLVK 271
            + +  + L++
Sbjct: 231 SYYKDAKDLLR 241



 Score = 44.0 bits (103), Expect = 0.021,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 31/88 (35%), Gaps = 8/88 (9%)

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
            +  Y   KY +A       +  Y E    D  YY +  S   +               +
Sbjct: 167 GYENYKNKKYSEAVKSLNLSLKLYDEDYYADDCYYFIAYSEYNI--------GNYDKAKE 218

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQ 188
            ++ I+  Y +S Y K A+  + +  N+
Sbjct: 219 ALNTIINNYPDSSYYKDAKDLLRIIENK 246


>gi|281349619|gb|EFB25203.1| hypothetical protein PANDA_002014 [Ailuropoda melanoleuca]
          Length = 434

 Score = 44.3 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 19/144 (13%), Positives = 43/144 (29%), Gaps = 26/144 (18%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARKSL-------LMSAFVQYSAGK 109
           E+  ++ KE  + +A   + +      +        A+K+        L  A        
Sbjct: 273 ERGTVYFKEGKYKQAVLQYKKIVSWLEYESSFSNEDAQKAQALRLASHLNLAMCHLKLQA 332

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           +  A     + +     ++      +  G ++   + D                ++++ Y
Sbjct: 333 FSAAIESCNKALELDSNNEKG---LFRRGEAHL-AVNDFDL-------ARADFQKVLQLY 381

Query: 170 TNSPYVKGARFYV--TVGRNQLAA 191
             S     A+  V     R QLA 
Sbjct: 382 P-SNKAAKAQLAVCQQRIRKQLAR 404



 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 32/78 (41%), Gaps = 2/78 (2%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKAYEYF 80
             L    ++A+C L      ++ +    ++  D   ++ ++ +    L   +F  A   F
Sbjct: 315 LRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFDLARADF 374

Query: 81  NQCSRDFPFAGVARKSLL 98
            +  + +P +  A K+ L
Sbjct: 375 QKVLQLYP-SNKAAKAQL 391


>gi|124266418|ref|YP_001020422.1| hypothetical protein Mpe_A1225 [Methylibium petroleiphilum PM1]
 gi|124259193|gb|ABM94187.1| hypothetical protein Mpe_A1225 [Methylibium petroleiphilum PM1]
          Length = 941

 Score = 44.3 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 30/73 (41%), Gaps = 8/73 (10%)

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
            Y+ A +  + Y+  YP+    D V Y +  +  Q            ++ L+ + R+V+ 
Sbjct: 105 DYRAAIASYQGYLKAYPKDPGNDRVLYQLARAQEQG--------GELEVALKTLDRLVQD 156

Query: 169 YTNSPYVKGARFY 181
           Y  + Y   A F 
Sbjct: 157 YPQTAYRDEAHFR 169



 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 39/121 (32%), Gaps = 19/121 (15%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG---------EY 206
           +  +    + +E    +P    A   +          E+E      KR          +Y
Sbjct: 57  EQAIAAYRKFLEVAPGAPQRAEAMRRLGDL-------EMESAD---KRSVEATATSGPDY 106

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
            AAI  +Q  L  Y      +  + +L  A      ++ A + +  + + YPQ  +    
Sbjct: 107 RAAIASYQGYLKAYPKDPGNDRVLYQLARAQEQGGELEVALKTLDRLVQDYPQTAYRDEA 166

Query: 267 E 267
            
Sbjct: 167 H 167



 Score = 35.9 bits (82), Expect = 6.5,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 25/67 (37%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           ++  A   +    + +P      + L   A  Q   G+ + A    +  +  YP++   D
Sbjct: 105 DYRAAIASYQGYLKAYPKDPGNDRVLYQLARAQEQGGELEVALKTLDRLVQDYPQTAYRD 164

Query: 132 YVYYLVG 138
             ++  G
Sbjct: 165 EAHFRRG 171



 Score = 35.5 bits (81), Expect = 9.2,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 32/99 (32%), Gaps = 6/99 (6%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
             D    R +Y+ A    +      A +  ++  +D+P      ++      + ++   Y
Sbjct: 121 PKDPGNDRVLYQLARAQEQGGELEVALKTLDRLVQDYPQTAYRDEAHFRRGELLFTVRDY 180

Query: 111 QQAASLGEEYITQYPESKNVDY---VYYLVGMSYAQMIR 146
            +A       +      +   Y     Y+ G S  +  R
Sbjct: 181 AKAEQAYGTVLA---GDEEGPYQGRALYMQGWSRFKQGR 216


>gi|94968709|ref|YP_590757.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94550759|gb|ABF40683.1| TPR repeat protein [Candidatus Koribacter versatilis Ellin345]
          Length = 1127

 Score = 44.3 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 71/235 (30%), Gaps = 52/235 (22%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
            AL+  F+IA                 D   D      +    V  + +Q   KA E F+
Sbjct: 11  LALSCSFAIAA----------------DHKPDPAEAARLNNIGVALMNQQRMEKAVEKFD 54

Query: 82  -QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
               +D         + L       +  K  ++ +   +     P++     V+Y +G+ 
Sbjct: 55  LALEKD----PKLSVAYLDKGIALLNLQKLPESEAALNKAGEAMPKNPR---VWYNLGL- 106

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
                  +          ++  +R+     N                        IG  Y
Sbjct: 107 -------LNRGAGKYDAAIENFNRVTTIDPNDSDTF-----------------YMIGSLY 142

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           L+  +Y  AI  ++  L        AE     L +A      ++EAR+ + + + 
Sbjct: 143 LQLQKYEDAIGAYKSALKINPLHASAE---FGLAKALQRAGKVEEARDHLHIFEH 194


>gi|30025849|gb|AAP04428.1| 34 kDa outer membrane protein [Coxiella burnetii]
          Length = 300

 Score = 44.3 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 34/125 (27%), Gaps = 45/125 (36%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +A+  L ++ + KA   F                        Y               
Sbjct: 174 YRQALDLLTKKQYDKAQASFQ----------------------NYLND------------ 199

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
              YP    +   +Y +G  Y Q        Q+  K        + +++  S  V  A+ 
Sbjct: 200 ---YPNGSYIANAHYWLGEIYLQ--------QKDRKNAAHEFQTVRDKFPKSEKVLDAKL 248

Query: 181 YVTVG 185
            + + 
Sbjct: 249 KLAII 253



 Score = 44.0 bits (103), Expect = 0.022,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 43/115 (37%), Gaps = 14/115 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                    +  Y N  Y+  A +++                 YL++ +   A   FQ V
Sbjct: 188 KAQASFQNYLNDYPNGSYIANAHYWLGEI--------------YLQQKDRKNAAHEFQTV 233

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
              +  +E   +A  +L         + +A+E ++ I++++P+   A+     ++
Sbjct: 234 RDKFPKSEKVLDAKLKLAIIDAEDGKIKQAKEELTEIKKQHPESTAAQLANIRLQ 288


>gi|257456245|ref|ZP_05621442.1| putative lipoprotein [Treponema vincentii ATCC 35580]
 gi|257446331|gb|EEV21377.1| putative lipoprotein [Treponema vincentii ATCC 35580]
          Length = 489

 Score = 44.3 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 67/204 (32%), Gaps = 43/204 (21%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D    + +YE+ V F  + ++ +A E F +  +  P      ++L+    V Y   K  +
Sbjct: 158 DPDNVQALYEEGVDFYNQGSYKEAGETFGKILKKHP---DDIQALIWCGKVYYLDNKMTE 214

Query: 113 AASLGEEYITQYP-ESKNVDYVYYLVGMSY--AQMIRD----VPYDQRAT---------- 155
           A       +   P  S  +  +  +   +   A+ I D    +  +  A           
Sbjct: 215 AEECYRTALKYQPKNSLAIAELARIKSETNRMAEAITDIQKAIDLEPDAAPHWTDLGSYN 274

Query: 156 ------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
                 +  L   +R +E   +S ++     Y+    + L  KE               A
Sbjct: 275 LQIGRKEEALAAFNRAIELVPDSYFI---HIYLAGLNDDLGNKE--------------DA 317

Query: 210 IPRFQLVLANYSDAEHAEEAMARL 233
           I  ++ V   Y     A E +  L
Sbjct: 318 IKHYKKVTELYPQYYFAYEGLGIL 341


>gi|255321986|ref|ZP_05363136.1| TPR repeat-containing protein [Campylobacter showae RM3277]
 gi|255301090|gb|EET80357.1| TPR repeat-containing protein [Campylobacter showae RM3277]
          Length = 298

 Score = 44.3 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 15/122 (12%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY-----LKRGEY 206
           Q       +          ++  +  A+       ++    +  +  +Y      ++  Y
Sbjct: 185 QDVASEAKKLF--------DTGKLDDAKARYEYLLSK--DHKPAMANFYLGEIAYQQKAY 234

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
             AI  +Q  +  Y  A++  + +     ++  +     A +    ++  YP    A+  
Sbjct: 235 NNAIKYYQQSIQLYDKADYTPKLLYHTAISFDKIKDTASANKFYKALKLGYPDSKEAKAA 294

Query: 267 ET 268
            T
Sbjct: 295 PT 296



 Score = 39.3 bits (91), Expect = 0.59,   Method: Composition-based stats.
 Identities = 21/149 (14%), Positives = 41/149 (27%), Gaps = 17/149 (11%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
           V      +      +    +  ++V  +A           A   +           +A  
Sbjct: 163 VASSSPDAELQTPKTDFTKQKNQDVASEAKKLFDTGKLDDAKARYEYLLSKDHKPAMANF 222

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY---VYYLVGMSYAQMIRDVPYDQ 152
            L   A   Y    Y  A    ++ I  Y      DY   + Y   +S+ ++        
Sbjct: 223 YLGEIA---YQQKAYNNAIKYYQQSIQLY---DKADYTPKLLYHTAISFDKI-------- 268

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFY 181
           + T    ++   +   Y +S   K A   
Sbjct: 269 KDTASANKFYKALKLGYPDSKEAKAAPTR 297


>gi|163751255|ref|ZP_02158483.1| hypothetical protein KT99_13937 [Shewanella benthica KT99]
 gi|161328969|gb|EDQ00043.1| hypothetical protein KT99_13937 [Shewanella benthica KT99]
          Length = 231

 Score = 44.3 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 14/109 (12%), Positives = 38/109 (34%), Gaps = 14/109 (12%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           QR  +  +   S  +++Y  S Y   A +++                    + ++  A  
Sbjct: 124 QRKYEEAIPAFSGFIKQYPESTYAANANYWLGQLL--------------YNKSDFEPAKQ 169

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            F+ V+  + D+    +++ +L      +  +  A+     + + Y   
Sbjct: 170 AFETVVNRFKDSNKRADSLVKLGMIAEKVGKVPSAKVYYQQVIKEYANS 218



 Score = 44.0 bits (103), Expect = 0.021,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 43/124 (34%), Gaps = 22/124 (17%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
              KY++A      +I QYPES       Y +G                 +   Q    +
Sbjct: 123 KQRKYEEAIPAFSGFIKQYPESTYAANANYWLGQLLYNKSD--------FEPAKQAFETV 174

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           V R+ +S     +   +      +A K   +G+         +A   +Q V+  Y+++  
Sbjct: 175 VNRFKDSNKRADSLVKL----GMIAEK---VGKV-------PSAKVYYQQVIKEYANSAA 220

Query: 226 AEEA 229
           A  A
Sbjct: 221 ARLA 224


>gi|67971760|dbj|BAE02222.1| unnamed protein product [Macaca fascicularis]
          Length = 613

 Score = 44.3 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 36/299 (12%), Positives = 88/299 (29%), Gaps = 56/299 (18%)

Query: 2   SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60
                +A+ I +    +  +       +++  + +G +  Q+S    +   +D      +
Sbjct: 217 QKDYNQAVEILKMLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 276

Query: 61  YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
             K        ++ KA E++      D   +     +L           +  +A      
Sbjct: 277 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 329

Query: 120 YITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKL--------- 157
           ++  +   +N   V Y +   Y              Q++  VP D +             
Sbjct: 330 FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVVPTDPQVLSKLGELYDHEG 389

Query: 158 ----MLQYMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEI 196
                 QY       +               ++ + + A  Y     + +      ++ +
Sbjct: 390 DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFEGASLIQPTQVKWQLMV 449

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
              + + G Y  A+  ++     + +     E +  LV     L L D A+E    ++ 
Sbjct: 450 ASCFRRSGNYQKALDTYKDTHRKFPE---NVECLRFLVRLCTDLGLKD-AQEYARKLKR 504


>gi|323487064|ref|ZP_08092372.1| hypothetical protein HMPREF9474_04123 [Clostridium symbiosum
           WAL-14163]
 gi|323399565|gb|EGA91955.1| hypothetical protein HMPREF9474_04123 [Clostridium symbiosum
           WAL-14163]
          Length = 512

 Score = 44.0 bits (103), Expect = 0.020,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 39/91 (42%), Gaps = 11/91 (12%)

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           ++L   A+  +SAG+  +A S  +  ++  P++  V        +    MI      Q  
Sbjct: 356 QTLEDLAYTMWSAGRLSEALSYYQTCLSIRPDNPKV--------IFNMAMIN---RSQGQ 404

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           T   +Q  +++V ++ +S Y   AR  +   
Sbjct: 405 TDTAVQLFTQVVTQFADSEYADRARSQLAEL 435


>gi|156741814|ref|YP_001431943.1| hypothetical protein Rcas_1834 [Roseiflexus castenholzii DSM 13941]
 gi|156233142|gb|ABU57925.1| Tetratricopeptide TPR_2 repeat protein [Roseiflexus castenholzii
           DSM 13941]
          Length = 593

 Score = 44.0 bits (103), Expect = 0.020,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 66/222 (29%), Gaps = 36/222 (16%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM-SAF 102
            D       D       +++A  F + Q + +A   F +     P        LLM    
Sbjct: 360 DDFTRALALDPENAEAYHQRARAFYRLQQYDEAIRDFTEALARDPNND----VLLMRRGV 415

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
                G+Y +A +  ++ +   P   +V + YY   +   Q    +              
Sbjct: 416 AYRDKGQYDEALADFDQSLQLNP---DVSFTYYHRAL-LFQATGRLER-------ARADF 464

Query: 163 SRIVERYTNSPYV-----------KGARFYVTVGRNQLAAKEVEIGRYYLKRGE------ 205
            R +                      AR  +      +     EI  Y+ +         
Sbjct: 465 DRALTIAPEYRLAYVGRGGLRLEQGDARGALRDCTRAIELDATEIDAYFCRARAAIALRD 524

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
           Y AA+     V+A   D+    +A      A+ AL   DEAR
Sbjct: 525 YRAAVADLDTVIARDPDS---ADAYRERGRAHQALRDTDEAR 563


>gi|298491867|ref|YP_003722044.1| tetratricopeptide repeat-containing protein ['Nostoc azollae' 0708]
 gi|298233785|gb|ADI64921.1| Tetratricopeptide TPR_2 repeat protein ['Nostoc azollae' 0708]
          Length = 743

 Score = 44.0 bits (103), Expect = 0.020,   Method: Composition-based stats.
 Identities = 20/157 (12%), Positives = 51/157 (32%), Gaps = 22/157 (14%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREV--YEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
                   +        D  T ++    V  + + +  L+ +N+  A   F++     P 
Sbjct: 584 GVACGNLGKHQEAYNCFDKATQIKPDDGVAWFNRGLSLLELENYEDAISSFDKALEFQPN 643

Query: 90  AG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
           +     ++      +     G+  +A +  ++ +   P   +    YY     +A     
Sbjct: 644 SPKIWDKR-----GYTLVRLGQDDEAITNFDKALEINPHYPS---AYYNKAACFAL---- 691

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
               QR   L L+ + + ++   +  Y + A   +  
Sbjct: 692 ----QREVPLALENLQKAIQIKPS--YREDAATDIEF 722


>gi|256844835|ref|ZP_05550293.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2]
 gi|294785884|ref|ZP_06751172.1| conserved hypothetical protein [Fusobacterium sp. 3_1_27]
 gi|256718394|gb|EEU31949.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2]
 gi|294487598|gb|EFG34960.1| conserved hypothetical protein [Fusobacterium sp. 3_1_27]
          Length = 414

 Score = 44.0 bits (103), Expect = 0.021,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 7/65 (10%)

Query: 214 QLVLANYSDAEHAE-------EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
           ++ + N+  +   E       E    +  +Y  L    E  + + L+++ +P   WA+  
Sbjct: 350 RVAIENFKKSLSTEKIQDKKPEIYYNIASSYAKLGNKVEVTKYLRLLKQEFPNSEWAKRS 409

Query: 267 ETLVK 271
           E L K
Sbjct: 410 EALTK 414


>gi|145589353|ref|YP_001155950.1| cellulose synthase domain-containing protein [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
 gi|145047759|gb|ABP34386.1| cellulose synthase operon C domain protein [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
          Length = 1271

 Score = 44.0 bits (103), Expect = 0.021,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 34/101 (33%), Gaps = 12/101 (11%)

Query: 65  VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
              LK  + + A    N+     P     R   L  A +       +   +L ++++ ++
Sbjct: 543 RQALKAGDTNTAIALLNKAVELEPDDVWLR---LDLARLYAKINHPKDGIALFDQFVKKH 599

Query: 125 PESKNVDYVY--YLVGMSYAQ-------MIRDVPYDQRATK 156
           P +    Y Y  YL G+   Q        I       + ++
Sbjct: 600 PNNVEGLYAYSLYLSGLDQNQAALKVLEQIPLADRTPKISR 640


>gi|327404519|ref|YP_004345357.1| hypothetical protein Fluta_2534 [Fluviicola taffensis DSM 16823]
 gi|327320027|gb|AEA44519.1| Tetratricopeptide TPR_1 repeat-containing protein [Fluviicola
           taffensis DSM 16823]
          Length = 1093

 Score = 44.0 bits (103), Expect = 0.021,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 41/118 (34%), Gaps = 17/118 (14%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGK 109
           D  Y    YE A+  ++ +++ KA    N        F F     +  L          K
Sbjct: 56  DTAYALAQYEIALSEMQLEHYDKAQNILNDLLQYKIRFNF---KHRVYLTLGNCYDQNKK 112

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
             +A  +  E +  YP   N+    Y  G++YA         Q+  K  +    + ++
Sbjct: 113 PDEAIRVYNEGLKLYPYQHNL---LYNRGLAYAN--------QKKYKEAISDYKQAIQ 159


>gi|323694572|ref|ZP_08108738.1| hypothetical protein HMPREF9475_03602 [Clostridium symbiosum
           WAL-14673]
 gi|323501340|gb|EGB17236.1| hypothetical protein HMPREF9475_03602 [Clostridium symbiosum
           WAL-14673]
          Length = 512

 Score = 44.0 bits (103), Expect = 0.021,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 39/91 (42%), Gaps = 11/91 (12%)

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           ++L   A+  +SAG+  +A S  +  ++  P++  V        +    MI      Q  
Sbjct: 356 QTLEDLAYTMWSAGRLSEALSYYQTCLSIRPDNPKV--------IFNMAMIN---RSQGQ 404

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           T   +Q  +++V ++ +S Y   AR  +   
Sbjct: 405 TDTAVQLFTQVVTQFADSEYADRARSQLAEL 435


>gi|283780487|ref|YP_003371242.1| Pyrrolo-quinoline quinone [Pirellula staleyi DSM 6068]
 gi|283438940|gb|ADB17382.1| Pyrrolo-quinoline quinone [Pirellula staleyi DSM 6068]
          Length = 1255

 Score = 44.0 bits (103), Expect = 0.021,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 1/62 (1%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ-RATKLMLQYMS 163
           Y +G Y  A ++ +E++ +YP   N        GM+  + + D   D  +  K   Q + 
Sbjct: 334 YRSGSYSTAIAVFDEFLKKYPSDPNSSLARVRRGMAQIRQVTDKASDPVQGLKAAQQVLP 393

Query: 164 RI 165
           +I
Sbjct: 394 QI 395


>gi|148974033|ref|ZP_01811566.1| hypothetical protein VSWAT3_12937 [Vibrionales bacterium SWAT-3]
 gi|145965730|gb|EDK30978.1| hypothetical protein VSWAT3_12937 [Vibrionales bacterium SWAT-3]
          Length = 656

 Score = 44.0 bits (103), Expect = 0.021,   Method: Composition-based stats.
 Identities = 17/116 (14%), Positives = 32/116 (27%), Gaps = 24/116 (20%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYE----------------KAVLFLKEQNFS 74
               +V    Q +        TD +   ++Y+                K +   K  +F 
Sbjct: 325 CGLAVVLSFSQPNTAFASPWKTDDQLGYQLYQDEDFQQAAEQFQQQEWKGISQYKAGDFE 384

Query: 75  KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
            A +     +           +    A  Q   GKY QA    +  +   P+ +  
Sbjct: 385 AAEQTLQGLTD--------ESARYNLANAQAQQGKYDQAIEEYQRILQNNPDHEYA 432


>gi|194367814|ref|YP_002030424.1| polysaccharide deacetylase [Stenotrophomonas maltophilia R551-3]
 gi|194350618|gb|ACF53741.1| polysaccharide deacetylase [Stenotrophomonas maltophilia R551-3]
          Length = 890

 Score = 44.0 bits (103), Expect = 0.021,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 45/136 (33%), Gaps = 14/136 (10%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
             +D +  ++  ++ +   +E+ + +A   F +  +  P    A ++     FV Y   +
Sbjct: 769 PASDRQRAQQANDRGLQLYREKQYDEAVAQFTEALKLRP--DFA-QAANNLGFVYYRQQR 825

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y +AA   E  +   P             ++Y  +  D  ++        Q  +  +   
Sbjct: 826 YAEAARWLENTLKIDPS----------RAVAYLNL-GDAYFNAGDKAKAKQAYTTYLALQ 874

Query: 170 TNSPYVKGARFYVTVG 185
                   AR  +   
Sbjct: 875 PQGSGAAQARAQLEKL 890


>gi|223938532|ref|ZP_03630424.1| TPR repeat-containing protein [bacterium Ellin514]
 gi|223892794|gb|EEF59263.1| TPR repeat-containing protein [bacterium Ellin514]
          Length = 432

 Score = 44.0 bits (103), Expect = 0.021,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 54/160 (33%), Gaps = 31/160 (19%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           +  L+L ++++  A   F + +   P   ++ +      +  Y +G Y++A S     I 
Sbjct: 203 RGQLYLDKKDYPLAIRDFTKSTDLNPTNELSYEYR---GWAYYKSGAYEKAISDYSSAIQ 259

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
             P  ++  Y     G++Y +            +  +   SR ++               
Sbjct: 260 LNPA-ESAAYGS--RGLAYEKS--------GELEKAIADYSRGIKLNPT----------- 297

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
               N +A         Y K+G++   I  ++  +     
Sbjct: 298 ----NVIALHARAAA--YHKQGKFDRVIEDYREAIKRKPT 331


>gi|42525963|ref|NP_971061.1| TPR domain-containing protein [Treponema denticola ATCC 35405]
 gi|41816013|gb|AAS10942.1| TPR domain protein [Treponema denticola ATCC 35405]
          Length = 992

 Score = 44.0 bits (103), Expect = 0.021,   Method: Composition-based stats.
 Identities = 24/207 (11%), Positives = 62/207 (29%), Gaps = 44/207 (21%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF---- 102
                 D + +  +Y     + +  ++  A + F       P       +    A+    
Sbjct: 101 EKAKAIDSKNETTLYNLGNTYKQNGDYKHAIQCFTDVLDIKP-----DDA---LAYNHLG 152

Query: 103 -VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
            V +    Y +A    +  +   P    +             +  ++  +++  K  +  
Sbjct: 153 SVYFLCKDYPKALETYKIGLKVDPNHPFL----------NFNLA-ELYKEEKHYKEAINS 201

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
               ++   N                 LA     I   Y++  E   AI  +++++ +  
Sbjct: 202 YQTAMKTKPN-------------WYEALA----AIADCYVEMEELGKAIETYKMIIGS-- 242

Query: 222 DAEHAEEAMARLVEAYVALALMDEARE 248
               +EE   +L + Y  +    +A +
Sbjct: 243 -TGQSEENFTKLAKLYEKIHEDKDAED 268


>gi|46447180|ref|YP_008545.1| hypothetical protein pc1546 [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|46400821|emb|CAF24270.1| unknown protein [Candidatus Protochlamydia amoebophila UWE25]
          Length = 896

 Score = 44.0 bits (103), Expect = 0.021,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 31/105 (29%), Gaps = 12/105 (11%)

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
             +++   N    +     +   +  L  KE           ++ AA   F      Y  
Sbjct: 477 KTLLKTSPNFD--QKTNEKILKLQGILLTKE----------NDWKAAYNHFSDFFKYYPH 524

Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
           +    E +  + +    L      +E +  +   YPQ  +A    
Sbjct: 525 SIEIGEILFWMADCCSHLNNEQVRQEHLRTLYLNYPQSPFAAPAY 569


>gi|325142635|gb|EGC65026.1| putative lipoprotein [Neisseria meningitidis 961-5945]
          Length = 238

 Score = 44.0 bits (103), Expect = 0.021,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 43/125 (34%), Gaps = 11/125 (8%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S   V   + +Y +A+   K   FS A               +A++S+ +    +   G 
Sbjct: 112 SAHTVETAQNLYNQALKHYKSGRFSAAASLLKGADGGD-GGSIAQRSMYLLLQSRARMGN 170

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVER 168
            +    +G  Y  ++ +S       + +G    +   +D+                +++ 
Sbjct: 171 CESVIEIGGRYANRFKDSPTAPEAMFKIGECQYRLQQKDIAR---------ATWRSLIQA 221

Query: 169 YTNSP 173
           Y +SP
Sbjct: 222 YPSSP 226



 Score = 35.9 bits (82), Expect = 5.8,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 18/43 (41%)

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + D+  A EAM ++ E    L   D AR     + + YP   
Sbjct: 184 RFKDSPTAPEAMFKIGECQYRLQQKDIARATWRSLIQAYPSSP 226


>gi|257094060|ref|YP_003167701.1| tetratricopeptide repeat-containing protein [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257046584|gb|ACV35772.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 784

 Score = 44.0 bits (103), Expect = 0.021,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 79/238 (33%), Gaps = 43/238 (18%)

Query: 30  IAVCFLVGWERQSSRDVYLDSVT-------DVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           +A C L+G      R+              D +   +        ++    ++A E   +
Sbjct: 526 VAACRLLGSIASERREWERAENAYARATQLDGKLADDWVALGQARVQRGKAAEAAEALQR 585

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY-VYYLVGMSY 141
                P  G A ++L          G Y +A   GE      P     DY  +   G S 
Sbjct: 586 ALAINPSQGTAYQALSAL---HGRRGDYTKALEYGERATQLEPT----DYQAWSNKGYSL 638

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            ++ R            +      +    +      A  ++ +G  ++A +++       
Sbjct: 639 LKLQR--------PGEAVPAFETALRLKPDF-----ANAWINLGEAKIAQRQM------- 678

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
             GE +AA+ +   +      +  A +A   L  AY+       ARE  +L+ E+ PQ
Sbjct: 679 --GEAIAALRKALEL------SPGASDARLYLTSAYIGAGQFALAREQATLLAEKVPQ 728


>gi|218441259|ref|YP_002379588.1| hypothetical protein PCC7424_4354 [Cyanothece sp. PCC 7424]
 gi|218173987|gb|ACK72720.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424]
          Length = 304

 Score = 44.0 bits (103), Expect = 0.021,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 41/114 (35%), Gaps = 6/114 (5%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAAS 115
           R  Y + + +    N+ KA E + Q       +  + ++L+        +  G +QQA +
Sbjct: 136 RAYYNQGLAYFALANYEKAVENYEQALLSSDSSSASVQALIYTDKGLTYFRLGNHQQAIT 195

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
              E I   P+++     YY  G      I D           LQ   +  E Y
Sbjct: 196 DLNEAIRLSPDNEK---AYYHRG-CVYSKIGDYRAALTDLTQALQLNYQFSEAY 245



 Score = 38.9 bits (90), Expect = 0.81,   Method: Composition-based stats.
 Identities = 26/210 (12%), Positives = 63/210 (30%), Gaps = 32/210 (15%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEY 79
           K     + +  +  L     Q+++     ++T      E Y  + +   +  N+ +A   
Sbjct: 64  KLISAAYSNRCLINLQLGNNQAAKSDCTTALTLNSNNVETYLNEGLAEYRLGNYPEAINQ 123

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY-YL-V 137
           + +            ++        ++   Y++A    E+ +     S        Y   
Sbjct: 124 YQEVIER---NKYDYRAYYNQGLAYFALANYEKAVENYEQALLSSDSSSASVQALIYTDK 180

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
           G++Y ++           +  +  ++  +    ++                        G
Sbjct: 181 GLTYFRL--------GNHQQAITDLNEAIRLSPDNEKAY-----------------YHRG 215

Query: 198 RYYLKRGEYVAAIPRFQLVLA-NYSDAEHA 226
             Y K G+Y AA+      L  NY  +E  
Sbjct: 216 CVYSKIGDYRAALTDLTQALQLNYQFSEAY 245


>gi|91202613|emb|CAJ72252.1| Hypothetical Protein kustd1507 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 700

 Score = 44.0 bits (103), Expect = 0.021,   Method: Composition-based stats.
 Identities = 11/69 (15%), Positives = 26/69 (37%), Gaps = 3/69 (4%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
                +LK+ N   A   + +    +P    A  +     F+     ++++A S  ++ +
Sbjct: 548 NLGSAYLKKGNPDAAIAQYRKALYIYPG--YAE-AHSNLGFIYTETNRFEEALSELKKAL 604

Query: 122 TQYPESKNV 130
              P+  N 
Sbjct: 605 RLNPDHANA 613



 Score = 40.1 bits (93), Expect = 0.31,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 70/227 (30%), Gaps = 54/227 (23%)

Query: 65  VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ- 123
              L+  ++   Y ++ + +++ P    A           Y  G   +A    E  +   
Sbjct: 415 RTVLRNNDWRDEYTFWTKIAKEQPDNHDAHN---NLGVFYYKHGDLDRAIGELERAVLLK 471

Query: 124 --YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV------ 175
             YPE  N       +G  Y         D+  T   +   S+ +     S Y       
Sbjct: 472 NDYPEGHNS------LGTMYI--------DKGLTDKAISEFSKAIHYDPASSYAYYNMGN 517

Query: 176 ----KGARFYVTVGRNQLAAKEVE-------IGRYYLKRGEYVAAIPRFQLVLANYSD-- 222
               K A     V  N+     +        +G  YLK+G   AAI +++  L  Y    
Sbjct: 518 AYFDKNALDECIVFFNKAIQLNMHKPQVFNNLGSAYLKKGNPDAAIAQYRKALYIYPGYA 577

Query: 223 ------------AEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
                           EEA++ L +A   L L  +     + +   Y
Sbjct: 578 EAHSNLGFIYTETNRFEEALSELKKA---LRLNPDHANAHNNLGALY 621


>gi|116747525|ref|YP_844212.1| TPR repeat-containing protein [Syntrophobacter fumaroxidans MPOB]
 gi|116696589|gb|ABK15777.1| TPR repeat-containing protein [Syntrophobacter fumaroxidans MPOB]
          Length = 567

 Score = 44.0 bits (103), Expect = 0.021,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 67/203 (33%), Gaps = 36/203 (17%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAAS 115
              +Y KA +FL  + + +A + +       P F      + L  A+V     + + A  
Sbjct: 181 PVALYYKARVFLDMKLYKQAEKIYLDVLAIEPAF----ENASLDLAYVYEVTERLKDAEQ 236

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
              + ++  P + N       +G  Y +  R            L++ S +++        
Sbjct: 237 TYLQILSANPANVN---ARTRLGNLYMRQDRPA--------EALRHFSHLLKL-----NR 280

Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
           K     + VG   L  K+            Y  AI  F  +L    D    ++A+  L  
Sbjct: 281 KDVESRLKVGIIHLQQKD------------YEEAIKDFTYLLK---DEPQYDQALYYLAS 325

Query: 236 AYVALALMDEAREVVSLIQERYP 258
            Y      ++A     LI    P
Sbjct: 326 TYAEKQDFEQAIRNFRLIARSSP 348


>gi|88801803|ref|ZP_01117331.1| tetratricopeptide repeat domain protein [Polaribacter irgensii
           23-P]
 gi|88782461|gb|EAR13638.1| tetratricopeptide repeat domain protein [Polaribacter irgensii
           23-P]
          Length = 605

 Score = 44.0 bits (103), Expect = 0.022,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 55/172 (31%), Gaps = 29/172 (16%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL---KEQNFSKAYEYFNQCSRD- 86
           A   L+  +  +     LD+         + E A   L   + +N  +A           
Sbjct: 443 AATQLIANDAAALYLKILDNEPIDSIPSGLTEFAHAELLEFQNKN-KEALTSLENLFTRK 501

Query: 87  --FPFA------GVAR----KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
             FP          +     ++ L+         K+++A +     I    +    D +Y
Sbjct: 502 DIFPNGLIPSEVIYSDVLFLQAKLLL-----KQKKHEEAIAALSHIIRGDSQFFLADTIY 556

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
           +++  +Y         D + T    +Y  +I+  Y  S YV  AR      R
Sbjct: 557 FMIAETYYN-------DLKKTSKAQEYYQKIIFEYPGSIYVIDAREKYRSVR 601


>gi|291567436|dbj|BAI89708.1| TPR domain protein [Arthrospira platensis NIES-39]
          Length = 883

 Score = 44.0 bits (103), Expect = 0.022,   Method: Composition-based stats.
 Identities = 18/152 (11%), Positives = 43/152 (28%), Gaps = 28/152 (18%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
             + + +  + +A   +       P +     S    A   Y    + +A    ++ I+ 
Sbjct: 364 GKILVNQNRYEQAIYQYQILVNQNPDSQWFYGS---LADACYQNQDWLKALENYQKAISI 420

Query: 124 YPESK--------------NVDYVY--YLVGMS------YAQMIRDVPYDQRATKLMLQY 161
                              ++D     Y   ++      Y + I +V   Q+  +  L+ 
Sbjct: 421 NSNHDWFYNGLGNCLQKLGDLDQAIEAYRNAINIKNCTWYYEEIINVFMSQQKWEEALKV 480

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
               ++   N      A   + +    L   E
Sbjct: 481 CFESLKNDPNH---YQAYTQIKLNLKHLGRHE 509



 Score = 39.3 bits (91), Expect = 0.58,   Method: Composition-based stats.
 Identities = 40/257 (15%), Positives = 78/257 (30%), Gaps = 65/257 (25%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++++A+ +L+E  F +A     Q  +  P       +          + + + A +  ++
Sbjct: 14  LHQQAIAYLEEGKFDEAIAKCQQVIQQQP--EW-VMAYKTLGLALQKSNRLEAAENAYKK 70

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP------ 173
            I       N+   Y  +G  YAQ        Q   +     + + +    N        
Sbjct: 71  AINL---DPNLVAAYGNLGSLYAQ--------QGRWEEAETTLKQAINIDPNFRGVYRNL 119

Query: 174 --------YVKGARFY------VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
                     + A+ Y      +     Q   +E++IG    + G++  A+  FQ  +A 
Sbjct: 120 ARVLTQRGRPEEAQIYWKRGLQLDGILKQRGQEELQIGNTLAEAGKWSEAVSAFQKAIAY 179

Query: 220 YSD---------------------AEHAEEAMAR----------LVEAYVALALMDEARE 248
           +                           E+A+A           L EA+ AL     A  
Sbjct: 180 HPQLFLAHHKLGLGLMQLNQPAEAVSAFEKAIAIQPDFSWSHHHLGEAFQALNQPALAVS 239

Query: 249 VVSLIQERYPQGYWARY 265
                    P   W+ Y
Sbjct: 240 AFRKAIAINPDFCWSYY 256


>gi|218290407|ref|ZP_03494537.1| Tetratricopeptide TPR_2 repeat protein [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218239535|gb|EED06729.1| Tetratricopeptide TPR_2 repeat protein [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 636

 Score = 44.0 bits (103), Expect = 0.022,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 47/110 (42%), Gaps = 11/110 (10%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           +    FL+   F  A E+  Q     P + +A ++ L  A+  Y  G+Y +A ++ E  +
Sbjct: 217 QDGRYFLEHGQFEVAVEWLEQVVAADP-SHIAARNNLSLAY--YYTGQYDKALAMAESVL 273

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            + P++        L  +    ++     D+   +  ++ + +++  + +
Sbjct: 274 ERQPDN--------LHALCNRALLLQHFGDEERLRRAVEPLLKVIPLHPD 315



 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 82/217 (37%), Gaps = 33/217 (15%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           +E+ + FL+  + ++A + F +     P   V        A V    G ++ +  L   Y
Sbjct: 79  FERGMRFLQRNDLARAVKAFQRTVEYEPDNPVN---YCNLAGVLAELGDFEASNELL-HY 134

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           + ++    ++   ++ +  +YA +               +++ R ++   +  Y   A  
Sbjct: 135 VLEH-MDPHMSECWFYLANNYANL--------GDYDAAEEHLLRYLDIDPDGEYAAEAEE 185

Query: 181 YVTVGRNQLAA-----------------KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
            +++  ++                    + ++ GRY+L+ G++  A+   + V+A   D 
Sbjct: 186 MLSILIDEFGGGRALERRRREEARAETMQAIQDGRYFLEHGQFEVAVEWLEQVVAA--DP 243

Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            H   A   L  AY      D+A  +   + ER P  
Sbjct: 244 SHIA-ARNNLSLAYYYTGQYDKALAMAESVLERQPDN 279


>gi|299137408|ref|ZP_07030590.1| transcriptional regulator, CadC [Acidobacterium sp. MP5ACTX8]
 gi|298600813|gb|EFI56969.1| transcriptional regulator, CadC [Acidobacterium sp. MP5ACTX8]
          Length = 793

 Score = 44.0 bits (103), Expect = 0.022,   Method: Composition-based stats.
 Identities = 47/288 (16%), Positives = 82/288 (28%), Gaps = 97/288 (33%)

Query: 30  IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP- 88
           I +C     E  ++   Y+    D     +     + + +  ++  A   FN+     P 
Sbjct: 494 ILLCLHRYSEAIAAEKKYVTLAPDEPNPYD--SLGMAYQQSGDYPNAILQFNKALSLNPQ 551

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI--------------------------- 121
           F      +++    V Y  G++ +A  L + YI                           
Sbjct: 552 FEP----AIIHMGDVYYQTGQFDKAIELYQHYIQVTRTEDAQALGYEDLATVYLAMKKMP 607

Query: 122 ----------TQYPES---------KNVDYVYYLVGMSYAQMI---------RDVPYDQR 153
                        P +         K  DY       S+ + I         R  P DQR
Sbjct: 608 EAEQAATLGLKSNPNAVWPSLVIALKKSDY----KTESHLEQILFKNIPTQERGTPGDQR 663

Query: 154 --------------ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
                          T+  L      +E    S         + +  + LA  E+++GR 
Sbjct: 664 TKFYYLGYIDLHKGNTQQALADFKTALEHLPPSS-------GMDIYEDCLANAELQLGR- 715

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
                 Y  A   +  +L    +     E    L EA   +A +DE +
Sbjct: 716 ------YEEAAVEYNRILKLNPNYPQTRE---HLAEAETHIARVDEKQ 754



 Score = 43.2 bits (101), Expect = 0.041,   Method: Composition-based stats.
 Identities = 43/247 (17%), Positives = 79/247 (31%), Gaps = 67/247 (27%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA--RKSLLMSAFVQ------------- 104
           +Y  +   + + +  +A +   + +  +P    A  R + L  A                
Sbjct: 420 LYVNSWYAISKGDVKEAEQTLTRITELYPQETEAYWRLARLSRADEHPAEGIEILKRGLA 479

Query: 105 YSAGK----------------YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
           YS                   Y +A +  ++Y+T  P+  N  Y    +GM+Y Q   D 
Sbjct: 480 YSPNDKNLNNTLGFILLCLHRYSEAIAAEKKYVTLAPDEPN-PYDS--LGMAY-QQSGDY 535

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
           P         +   ++ +                           + +G  Y + G++  
Sbjct: 536 P-------NAILQFNKALSLNPQFEPAI-----------------IHMGDVYYQTGQFDK 571

Query: 209 AIPRFQLVLANYSDAEHAEEAMAR----LVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
           AI     +  +Y      E+A A     L   Y+A+  M EA +  +L  +  P   W  
Sbjct: 572 AI----ELYQHYIQVTRTEDAQALGYEDLATVYLAMKKMPEAEQAATLGLKSNPNAVWPS 627

Query: 265 YVETLVK 271
            V  L K
Sbjct: 628 LVIALKK 634


>gi|260598133|ref|YP_003210704.1| tetratricopeptide repeat protein [Cronobacter turicensis z3032]
 gi|260217310|emb|CBA31285.1| Uncharacterized protein yciM [Cronobacter turicensis z3032]
          Length = 381

 Score = 44.0 bits (103), Expect = 0.022,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 62/189 (32%), Gaps = 42/189 (22%)

Query: 64  AVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
              ++    + +A + FNQ     DF    + +   +  A        +Q+A    E  +
Sbjct: 106 GRDYMAAGLYDRAEDMFNQLVDETDFRIGALQQLLQIYQA-----TSDWQKAIDAAERLV 160

Query: 122 TQYPESKNVDYVYY-----LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
               E + V+  ++     L  MS   M R            +  + +      NS    
Sbjct: 161 KLGKEHQRVEIAHFYCELALQAMSNEDMDR-----------AMSLLKKGAAADRNS---- 205

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                        A   + +GR ++ RG+Y  A+   + V++   D E   E +  L   
Sbjct: 206 -------------ARVSIMMGRIFMTRGDYAHAVEMLEKVIS--QDRELVSETLEMLQVC 250

Query: 237 YVALALMDE 245
           Y  L    E
Sbjct: 251 YQQLGKPAE 259


>gi|312886007|ref|ZP_07745635.1| Tetratricopeptide TPR_2 repeat protein [Mucilaginibacter paludis
           DSM 18603]
 gi|311301544|gb|EFQ78585.1| Tetratricopeptide TPR_2 repeat protein [Mucilaginibacter paludis
           DSM 18603]
          Length = 205

 Score = 44.0 bits (103), Expect = 0.022,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 38/111 (34%), Gaps = 13/111 (11%)

Query: 53  DVRYQREVYEK-AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAG 108
           DV   +  Y K     L + +F +A  +  +                +L M  +  Y + 
Sbjct: 16  DVAQAQNAYVKLGQQALMDGDFKQAVRHLEKACVVDST------NANALWMLGYSYYHSE 69

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
            Y++A S   + +   P   +    YY   M+ +   RDV       +  L
Sbjct: 70  NYKKAISTYCKVVEIKPTDCS---AYYYRAMAKSYSARDVQATPADKEKFL 117


>gi|225621426|ref|YP_002722685.1| putative TPR domain-containing protein [Brachyspira hyodysenteriae
           WA1]
 gi|225216247|gb|ACN84981.1| putative TPR domain-containing protein [Brachyspira hyodysenteriae
           WA1]
          Length = 817

 Score = 44.0 bits (103), Expect = 0.022,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 59/139 (42%), Gaps = 15/139 (10%)

Query: 30  IAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFP 88
           IA+  +   + ++S + +  ++     + E+Y    +++ ++  + KA EY+N+     P
Sbjct: 523 IALAEMSLEDYKNSLEDFNKALELGYDEAEIYINIGLIYSRQAVYDKAIEYYNKVLEINP 582

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
                  +    AF   +  KY++A  + ++ I  YP + +   VYY  G +  +  +  
Sbjct: 583 N---KVNAYYNIAFSLSNMDKYEEALEIYDKVIRMYPGNFD---VYYERGYTKYRASK-- 634

Query: 149 PYDQRATKLMLQYMSRIVE 167
                  +  ++    I+ 
Sbjct: 635 ------YEEAVRDFDIIIN 647



 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 17/124 (13%), Positives = 45/124 (36%), Gaps = 14/124 (11%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           +D           +   Y++ +  L   N+ +A E F +  +          S +     
Sbjct: 60  KDFERAIELGDDSETVYYDRGLAKLYLGNYEEAIEDFKRVLKI---NNNDTDSRVNIGLC 116

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
                KY++A ++ +E I  +P++ +    Y   G+    + +         +  +   +
Sbjct: 117 YLYMKKYKEAINIYDEVIANFPDNISS---YNNRGLCKFYLSQ--------FEEAINDFN 165

Query: 164 RIVE 167
           +++E
Sbjct: 166 KVIE 169



 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 57/172 (33%), Gaps = 45/172 (26%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK-------Y 110
            E+  KA    + + + K+ EY ++    +               + ++ G        Y
Sbjct: 6   EELLNKAKDAFENKEYEKSIEYIDKVI-FYNGDSY---------DLYHNRGLSKLNLRLY 55

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           ++A    E  I       + + VYY  G++   +           +  ++   R+++   
Sbjct: 56  EEAIKDFERAIEL---GDDSETVYYDRGLAKLYL--------GNYEEAIEDFKRVLK--- 101

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
                           N      V IG  YL   +Y  AI  +  V+AN+ D
Sbjct: 102 --------------INNNDTDSRVNIGLCYLYMKKYKEAINIYDEVIANFPD 139



 Score = 36.2 bits (83), Expect = 5.4,   Method: Composition-based stats.
 Identities = 42/276 (15%), Positives = 92/276 (33%), Gaps = 46/276 (16%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKE-------- 70
           L K AL  +     C     E  ++     + +  ++ + E+Y++A+ +L +        
Sbjct: 355 LVKRALRDYEGALSCLNKILEIDNTDVSIYNEIALIKIELELYDEALYYLNKALDIDTNN 414

Query: 71  --------------QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
                         +N+ +A   FN+         +A  +        Y    Y+ +   
Sbjct: 415 AEIYNSIGLVYHYKKNYEEAIRNFNKAIELN--TSMAS-AYYNIGLAYYEMHDYENSIQY 471

Query: 117 GEEYITQYPESKNVDYVY------------YLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
             + +   P+  +    Y            Y   + Y +   ++  D       +     
Sbjct: 472 YNKALEINPQYAS---AYINLGLIKHNLGNYKEAIDYYKKALEINPDYSLAYYNIALAEM 528

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
            +E Y NS  ++     + +G ++ A   + IG  Y ++  Y  AI  +  VL    +  
Sbjct: 529 SLEDYKNS--LEDFNKALELGYDE-AEIYINIGLIYSRQAVYDKAIEYYNKVLEINPNKV 585

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           +A      +  +   +   +EA E+   +   YP  
Sbjct: 586 NAY---YNIAFSLSNMDKYEEALEIYDKVIRMYPGN 618


>gi|190576474|ref|YP_001974319.1| putative polysaccharide deacetylase family protein
           [Stenotrophomonas maltophilia K279a]
 gi|190014396|emb|CAQ48044.1| putative polysaccharide deacetylase family protein
           [Stenotrophomonas maltophilia K279a]
          Length = 890

 Score = 44.0 bits (103), Expect = 0.022,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 45/136 (33%), Gaps = 14/136 (10%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
             +D +  ++  ++ +   +E+ + +A   F +  +  P    A ++     FV Y   +
Sbjct: 769 PASDRQRAQQANDRGLQLYREKQYDEAVAQFTEALKLRP--DFA-QAANNLGFVYYRQQR 825

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y +AA   E  +   P             ++Y  +  D  ++        Q  +  +   
Sbjct: 826 YAEAARWLENTLKIDPS----------RAVAYLNL-GDAYFNAGDKAKAKQAYTTYLALQ 874

Query: 170 TNSPYVKGARFYVTVG 185
                   AR  +   
Sbjct: 875 PQGSGAAQARAQLEKL 890


>gi|172039046|ref|YP_001805547.1| hypothetical protein cce_4133 [Cyanothece sp. ATCC 51142]
 gi|171700500|gb|ACB53481.1| unknown [Cyanothece sp. ATCC 51142]
          Length = 168

 Score = 44.0 bits (103), Expect = 0.022,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 24/67 (35%), Gaps = 2/67 (2%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRD-FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y++    L    +  + +   +      P + +  +  L          K   A +L EE
Sbjct: 12  YQQGQALLDRGQYRSSVKTLEEAKSLVNPSSKLGGEVQLSLVTAYQGVDKLDDAIALCEE 71

Query: 120 YITQYPE 126
            +T++P 
Sbjct: 72  -LTRHPN 77


>gi|300867655|ref|ZP_07112302.1| hypothetical protein OSCI_3440027 [Oscillatoria sp. PCC 6506]
 gi|300334366|emb|CBN57474.1| hypothetical protein OSCI_3440027 [Oscillatoria sp. PCC 6506]
          Length = 1196

 Score = 44.0 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 38/112 (33%), Gaps = 16/112 (14%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y + V         +A   + +     P    A        +   + G++++A +  ++ 
Sbjct: 702 YNRGVALFNLGRNEEAIASYEKVIEFKPDDYYAWN---NRGWALQNLGQFEEAIASYDKV 758

Query: 121 ITQYPE-SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           I   P+  +     +Y  G++   + R+        +  +    + +E   +
Sbjct: 759 IEFKPDKHE----AWYNRGVALFNLGRN--------EEAIASYEKAIEIKPD 798



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 59/182 (32%), Gaps = 29/182 (15%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           Y + V         +A   + +     P  +     + ++      +  G++++A +  +
Sbjct: 770 YNRGVALFNLGRNEEAIASYEKAIEIKPDFYEAWFTRGIV-----LFKLGRFEEALASYD 824

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           + I   P+       +   G +  ++        R  K  L    + +E   +  Y    
Sbjct: 825 KAIEIKPDDHE---AWNNRGWALGEL--------RRFKEALTSCDKAIEIKADYHYAW-- 871

Query: 179 RFYVTVGRNQLAAKEVEIGRYY----LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
                  RN L   E  I  Y     +K   Y A   R   +     +    EEA+A L 
Sbjct: 872 NNRGWALRN-LGRFEEAIASYNKALEIKPDHYEAWNNRGVAL----QNLGRFEEALASLD 926

Query: 235 EA 236
           +A
Sbjct: 927 KA 928


>gi|325105836|ref|YP_004275490.1| Tetratricopeptide TPR_1 repeat-containing protein [Pedobacter
           saltans DSM 12145]
 gi|324974684|gb|ADY53668.1| Tetratricopeptide TPR_1 repeat-containing protein [Pedobacter
           saltans DSM 12145]
          Length = 283

 Score = 44.0 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 45/126 (35%), Gaps = 22/126 (17%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNS---------PYVKGARFYVTVGRNQL--A 190
            Q   D    Q  T+  +   ++ +E    S          YV G    +   +  L   
Sbjct: 136 YQNFPDTTSVQGLTEKAIHAYNKALELNAESLDAQTGLGIAYVTGTNNPMQGIQLLLKVV 195

Query: 191 AKE-------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
            K+       + +G + +K G++  A+ RF+ V+      +   EA   +  +Y  + + 
Sbjct: 196 EKDPENLKANMSLGLFSMKSGQFGKAVDRFKTVVK----VKKDPEAYFYMATSYENMGMK 251

Query: 244 DEAREV 249
             A E 
Sbjct: 252 TAAVEA 257


>gi|254473133|ref|ZP_05086531.1| TPR repeat:Molluscan rhodopsin C-terminal domain protein
           [Pseudovibrio sp. JE062]
 gi|211957854|gb|EEA93056.1| TPR repeat:Molluscan rhodopsin C-terminal domain protein
           [Pseudovibrio sp. JE062]
          Length = 295

 Score = 44.0 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 12/89 (13%), Positives = 27/89 (30%), Gaps = 8/89 (8%)

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
            +S   + +     G Y  A    + ++  YP+ +      + +G S           QR
Sbjct: 170 PQSDYNAIYGLMVGGNYPAATEGFDTFLGMYPDHELTANAQHWLGESLLA--------QR 221

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYV 182
             +   Q   +    +  S     +   +
Sbjct: 222 QYENAAQAFLKSYTDFPESELAPESLLKL 250



 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 32/101 (31%), Gaps = 14/101 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              +     +  Y +      A+ ++    + LA              +Y  A   F   
Sbjct: 188 AATEGFDTFLGMYPDHELTANAQHWLGE--SLLAQ------------RQYENAAQAFLKS 233

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
             ++ ++E A E++ +L  A   +     A E    +   +
Sbjct: 234 YTDFPESELAPESLLKLGTALTGMGNAPAACETYEQLLANF 274


>gi|193216265|ref|YP_001997464.1| tetratricopeptide domain-containing protein [Chloroherpeton
           thalassium ATCC 35110]
 gi|193089742|gb|ACF15017.1| Tetratricopeptide TPR_2 repeat protein [Chloroherpeton thalassium
           ATCC 35110]
          Length = 365

 Score = 44.0 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 47/154 (30%), Gaps = 19/154 (12%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLD-------SVTDVRYQREVYEKAVLFLKEQ 71
           + + AL +   +A   +   +      + L         +   +  RE      L+ K +
Sbjct: 1   MLRIALILVMFLASAPIYALQEPLPSSLELRREVDRIMEMEPEKAAREFIRLGELYFKHK 60

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
            + KA   F   +   P      K+        Y    Y  A +    YI     S N  
Sbjct: 61  KYEKAAVLFEAATTKNPTG----KAFFNLGSAYYMMQAYDDAINA---YIYAVKISPNYA 113

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
             YY +G++Y Q            K    Y+  +
Sbjct: 114 EGYYNLGLAYYQSGNFYS-----AKDAFAYVVEL 142



 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 62/222 (27%), Gaps = 34/222 (15%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
            C  +G ++ +       +  D  +    Y   + + + + + KA    N+  +      
Sbjct: 156 ACVRIGLDKSAVDAYQKAADLDPNFIDAYYNLGLSYKRLEQYDKAVAALNKAVQI---GA 212

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
                          AG   QA    +           +    Y +G+S+  +     YD
Sbjct: 213 NDPAIFFSLGECYQGAGDNNQAIVAFQNAFKLNSNDPEI---LYQIGVSHVNLE---EYD 266

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           Q      ++     +                       A     +G  Y K  +Y  A+ 
Sbjct: 267 Q-----AIRAFGSALR-----------------MNKDFAECYYNLGIIYTKTHKYQNALY 304

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            ++ V+    +      A   L  AY+     + AR     +
Sbjct: 305 AYEQVVRIQPE---NRTAYYNLGVAYINAGDTESARRTYKSL 343


>gi|149918345|ref|ZP_01906836.1| hypothetical protein PPSIR1_36557 [Plesiocystis pacifica SIR-1]
 gi|149820871|gb|EDM80280.1| hypothetical protein PPSIR1_36557 [Plesiocystis pacifica SIR-1]
          Length = 786

 Score = 44.0 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 45/153 (29%), Gaps = 17/153 (11%)

Query: 34  FLVGWERQSSRDVYLDS--VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
            L   +  S  DV + S  V      R  Y  A   L + +   A   F   ++ FP   
Sbjct: 218 ALASLDSVSPLDVPMSSGGVGAQWRVRAAYMAATASLAKGDIDDALTRFGLLTQSFPKGE 277

Query: 92  ----VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
               +   + L  A + +  G+ + A            +S       Y    +       
Sbjct: 278 RDKRIVELANLALARIHHDQGETELAVKSYRRISR---DSPFFPEAMYETAWTLLAA--- 331

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
                 A    LQ +  ++    +SP V   + 
Sbjct: 332 -----GAHDRALQALDLLLVYDPDSPIVPEIKQ 359


>gi|34763427|ref|ZP_00144375.1| hypothetical protein [Fusobacterium nucleatum subsp. vincentii ATCC
           49256]
 gi|27886896|gb|EAA24020.1| hypothetical protein [Fusobacterium nucleatum subsp. vincentii ATCC
           49256]
          Length = 407

 Score = 44.0 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 7/65 (10%)

Query: 214 QLVLANYSDAEHAE-------EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
           ++ + N+  +   E       E    +  +Y  L    E  + + L+++ +P   WA+  
Sbjct: 343 RVAIENFKKSLSTEKIQDKKPEIYYNIASSYAKLGNKVEVTKYLRLLKQEFPNSEWAKRS 402

Query: 267 ETLVK 271
           E L K
Sbjct: 403 EALTK 407


>gi|315185805|gb|EFU19571.1| Tetratricopeptide TPR_1 repeat-containing protein [Spirochaeta
           thermophila DSM 6578]
          Length = 654

 Score = 44.0 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 27/204 (13%), Positives = 68/204 (33%), Gaps = 40/204 (19%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +++ +      ++++ +A E +     ++  F     ++    A   +S G+Y+ A +  
Sbjct: 24  QLFRQGEEARIQEDYHRAIELYQQAIQKNPAF----VQAYKGLAEAYFSLGQYEVALAGA 79

Query: 118 EEYITQYPESKN--VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
           E+  +  P S +  + Y   L+ +                +   +    I+ R   +   
Sbjct: 80  EKAKSLDPRSTDSHLLYARCLLAL-------------GRLEEAERIYRDILSREPQNVEA 126

Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
                             + I    L RG+  +A+  ++  L  + +    ++ +  L  
Sbjct: 127 G-----------------MGIAELSLARGQVASALREYERTLRMFPE---HKKILTILAF 166

Query: 236 AYVALALMDEAREVVSLIQERYPQ 259
            Y      D+A   +      YP 
Sbjct: 167 LYEYRGERDKAASYLEEALRLYPS 190



 Score = 40.1 bits (93), Expect = 0.31,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 42/112 (37%), Gaps = 25/112 (22%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           G++Q+A    + ++   P+S+     +YL G+   ++ R         +  L+    ++E
Sbjct: 240 GRFQEALDHLDGFLGARPDSREG---WYLKGVVLDRLDR--------PEESLRAFREVLE 288

Query: 168 RYTNSPYVKGARFYVTV--------GRNQLAAKEV-----EIGRYYLKRGEY 206
           RY +    + A   + +         R   A            ++Y +R  Y
Sbjct: 289 RYPDDEVARYAMERILLERFPASAPERRTAADYHFTQAGEYAEKFYFQR-AY 339



 Score = 39.7 bits (92), Expect = 0.40,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 68/228 (29%), Gaps = 44/228 (19%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK--SLLMSAFVQYSAGKYQQAASLG 117
           +Y + +L L      +A   +       P    A    + L  A      G+   A    
Sbjct: 95  LYARCLLAL--GRLEEAERIYRDILSREPQNVEAGMGIAELSLA-----RGQVASALREY 147

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           E  +  +PE K +     L  +++    R    D         Y+   +  Y + P V  
Sbjct: 148 ERTLRMFPEHKKI-----LTILAFLYEYRG-ERD-----KAASYLEEALRLYPSDPEV-- 194

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRG----------EYVAA-----IPRFQLVLANYSD 222
              ++    + L  +E +      +R            Y+ A       RFQ  L +   
Sbjct: 195 ---HLLAASSHLRKEEWDEAEREARRALTLDENAVEASYLLAQVATGKGRFQEALDHLDG 251

Query: 223 A----EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
                  + E           L   +E+      + ERYP    ARY 
Sbjct: 252 FLGARPDSREGWYLKGVVLDRLDRPEESLRAFREVLERYPDDEVARYA 299



 Score = 39.7 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 49/223 (21%), Positives = 79/223 (35%), Gaps = 30/223 (13%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCSRD 86
              A C L     + +  +Y D ++      E     A L L     + A   + +  R 
Sbjct: 94  LLYARCLLALGRLEEAERIYRDILSREPQNVEAGMGIAELSLARGQVASALREYERTLRM 153

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
           FP     +K L + AF+    G+  +AAS  EE +  YP       V+ L   S+   +R
Sbjct: 154 FPEH---KKILTILAFLYEYRGERDKAASYLEEALRLYPSDPE---VHLLAASSH---LR 204

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPY----VKGARFYVTVGRNQLAAKEVEIGR---- 198
              +D  A +   + +  + E    + Y    V   +       + L        R    
Sbjct: 205 KEEWD-EAEREARRAL-TLDENAVEASYLLAQVATGKGRFQEALDHLDG--FLGARPDSR 260

Query: 199 --YYLK------RGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
             +YLK            ++  F+ VL  Y D E A  AM R+
Sbjct: 261 EGWYLKGVVLDRLDRPEESLRAFREVLERYPDDEVARYAMERI 303


>gi|218247206|ref|YP_002372577.1| lytic transglycosylase catalytic subunit [Cyanothece sp. PCC 8801]
 gi|218167684|gb|ACK66421.1| Lytic transglycosylase catalytic [Cyanothece sp. PCC 8801]
          Length = 730

 Score = 44.0 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 63/208 (30%), Gaps = 46/208 (22%)

Query: 100 SAFVQYSAGKYQQAASLGE-------------EYITQYPE--SKNVDYVYYLVGMSYAQM 144
            A   ++   Y +AA   +                   P   +K      Y   +     
Sbjct: 240 IADGYWAVEDYYKAALAYQKAPSTAQNLYRIGRGQQLQPNGNNKATVQAAYQKLLVAFPQ 299

Query: 145 IRDVPYD-QRATKL-----MLQYMSRIVERYTNSPYVKGARFYVTVGRNQL--------- 189
             +     QR  +L      + Y+ +++ ++        A        ++L         
Sbjct: 300 APEAALALQRLAQLSQPETAISYLDQLINKFP--EQAGDALVKKAELLDKLNRQGEATKI 357

Query: 190 --------------AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
                         A     I +   +RG+ + A    Q ++ N  ++  A +A   + +
Sbjct: 358 RQTLLSKYAKSDATAEYRWLIAQKAAERGDALKAWTWAQPIVVNNPESPLAPKAGFWVGK 417

Query: 236 AYVALALMDEAREVVSLIQERYPQGYWA 263
               L  ++EA      +  R+PQ Y+A
Sbjct: 418 WAQQLGRLEEAETAFEYVVTRHPQSYYA 445


>gi|222054188|ref|YP_002536550.1| hypothetical protein Geob_1089 [Geobacter sp. FRC-32]
 gi|221563477|gb|ACM19449.1| conserved hypothetical protein [Geobacter sp. FRC-32]
          Length = 149

 Score = 44.0 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 29/73 (39%), Gaps = 3/73 (4%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA-YVALALMDEAREVVSLIQERYPQ 259
              G+Y  AI RF  VL+++ ++  A EA+     + Y         +E    +   YP 
Sbjct: 77  FDNGDYNDAILRFNEVLSSHRNSGAAPEALYLTGVSRYKTSHNAGNLKETYQRLAAEYPA 136

Query: 260 GYWARYV--ETLV 270
             W +      L+
Sbjct: 137 SEWVKRASPYNLL 149



 Score = 42.8 bits (100), Expect = 0.057,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 29/85 (34%), Gaps = 7/85 (8%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
           LL      +  G Y  A     E ++ +  S       YL G+S  +   +         
Sbjct: 69  LLGLGKADFDNGDYNDAILRFNEVLSSHRNSGAAPEALYLTGVSRYKTSHN-------AG 121

Query: 157 LMLQYMSRIVERYTNSPYVKGARFY 181
            + +   R+   Y  S +VK A  Y
Sbjct: 122 NLKETYQRLAAEYPASEWVKRASPY 146



 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 30/84 (35%), Gaps = 7/84 (8%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS---- 106
             +      +           +++ A   FN+       +G A ++L ++   +Y     
Sbjct: 60  PPEELVPSLLLGLGKADFDNGDYNDAILRFNEVLSSHRNSGAAPEALYLTGVSRYKTSHN 119

Query: 107 AGKYQQAASLGEEYITQYPESKNV 130
           AG  ++     +    +YP S+ V
Sbjct: 120 AGNLKE---TYQRLAAEYPASEWV 140


>gi|88602778|ref|YP_502956.1| TPR repeat-containing serine/threonine protein protein kinase
           [Methanospirillum hungatei JF-1]
 gi|88188240|gb|ABD41237.1| serine/threonine protein kinase with TPR repeats [Methanospirillum
           hungatei JF-1]
          Length = 862

 Score = 44.0 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 50/168 (29%), Gaps = 31/168 (18%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
            +  A + +   +Y ++  + ++ +  YP         +  G S       +        
Sbjct: 720 QIGLARLYFKQKRYWESIEICDKILATYPGLPK---ALFYKGESLYA----IERVP---- 768

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             LQ    I   + +         ++               R YLK G+Y  A      V
Sbjct: 769 EALQSFLDICNNHPD---------HLQSCVK--------AARCYLKLGDYTEADKYITGV 811

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
           +          EA+   V   +      EAR  +  I    P+  WA+
Sbjct: 812 IEKDET---IIEALRIKVFILLKRGAKAEARLYLDKILVIDPENEWAQ 856


>gi|150009734|ref|YP_001304477.1| TPR domain-containing protein [Parabacteroides distasonis ATCC
           8503]
 gi|255012976|ref|ZP_05285102.1| TPR domain-containing protein [Bacteroides sp. 2_1_7]
 gi|149938158|gb|ABR44855.1| TPR domain protein [Parabacteroides distasonis ATCC 8503]
          Length = 1186

 Score = 44.0 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 58/177 (32%), Gaps = 26/177 (14%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
                  +    E    ++P++++    YY V   Y   ++        T L  +Y +++
Sbjct: 607 KLEDIPLSVEAFENLERRFPDNEHRLESYYQV---YLMALKT-----GNTVLATEYKNKL 658

Query: 166 VERYTNSPYVKGAR--------FYVTVGRNQLAAKEVEIGRY--YLKRG-EYVAAIPRFQ 214
           +  +  S Y               + V ++      +    Y  YL+    YV     F+
Sbjct: 659 MNAFPESDYAVAVADPNYEYNIRMMDVVQDS-----IYQATYDRYLESDTAYV--RKSFR 711

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
            V   Y  A    + M     +YV     +  +  +  + E+YP          ++K
Sbjct: 712 YVSEKYPLATLMPKFMFLDALSYVQAGDAEGFKNALKALVEKYPNADVTELAGEMLK 768


>gi|308389544|gb|ADO31864.1| putative periplasmic protein [Neisseria meningitidis alpha710]
 gi|325130519|gb|EGC53274.1| putative lipoprotein [Neisseria meningitidis OX99.30304]
 gi|325201863|gb|ADY97317.1| putative lipoprotein [Neisseria meningitidis M01-240149]
 gi|325208385|gb|ADZ03837.1| putative lipoprotein [Neisseria meningitidis NZ-05/33]
          Length = 238

 Score = 44.0 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 44/130 (33%), Gaps = 11/130 (8%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S   V   + +Y +A+   K   FS A               +A++S+ +    +   G 
Sbjct: 112 SAHTVETAQNLYNQALKHYKSGRFSAAAALLKGADGGD-GGSIAQRSMYLLLQSRARMGN 170

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVER 168
            +    +G  Y  ++ +S       + +G    +   +D+                +++ 
Sbjct: 171 CESVIEIGGRYANRFKDSPTAPEAIFKIGECQYRLQQKDIAR---------ATWRSLIQA 221

Query: 169 YTNSPYVKGA 178
           Y  SP  K A
Sbjct: 222 YPGSPAAKRA 231



 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 20/48 (41%)

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
            + D+  A EA+ ++ E    L   D AR     + + YP    A+  
Sbjct: 184 RFKDSPTAPEAIFKIGECQYRLQQKDIARATWRSLIQAYPGSPAAKRA 231


>gi|88811526|ref|ZP_01126781.1| Peptidase M48, Ste24p [Nitrococcus mobilis Nb-231]
 gi|88791415|gb|EAR22527.1| Peptidase M48, Ste24p [Nitrococcus mobilis Nb-231]
          Length = 485

 Score = 44.0 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 58/175 (33%), Gaps = 27/175 (15%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR----KSLLMSAFVQYSAGKYQQAASL 116
           Y  A+       +++A     +  R       A      + +  A     A + +QA + 
Sbjct: 312 YGLALALQHTGEYARARTILLRLLRTH--GEYAPYFVGLAEVSRA-----AKQPEQALTA 364

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
             E ++ +P+    DY   L  +       +   D+   +   +  + +V  +     + 
Sbjct: 365 VREGLSLFPD----DYA--LRVL-----HVETLLDEGHAQQAQRIATTVVSDHPEDANLW 413

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA-----NYSDAEHA 226
                      Q    ++ +G YY  RG+  +A+ + + VL       Y  +   
Sbjct: 414 QLVARAADSAGQQVQAQLAMGHYYYLRGDIPSALEQIKHVLESSKADEYQKSRAT 468


>gi|237741500|ref|ZP_04571981.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13]
 gi|229429148|gb|EEO39360.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13]
          Length = 414

 Score = 44.0 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 7/65 (10%)

Query: 214 QLVLANYSDAEHAE-------EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
           ++ + N+  +   E       E    +  +Y  L    E  + + L+++ +P   WA+  
Sbjct: 350 RVAIENFKKSLSTEKIQDKKPEIYYNIASSYAKLGNKVEVTKYLRLLKQEFPNSEWAKRS 409

Query: 267 ETLVK 271
           E L K
Sbjct: 410 EALTK 414


>gi|187736127|ref|YP_001878239.1| type II and III secretion system protein [Akkermansia muciniphila
           ATCC BAA-835]
 gi|187426179|gb|ACD05458.1| type II and III secretion system protein [Akkermansia muciniphila
           ATCC BAA-835]
          Length = 833

 Score = 44.0 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 68/229 (29%), Gaps = 51/229 (22%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE------VYEKAVLFLKEQNFSKAY-- 77
           I  ++AV  +   +  +            R + +      +  +A     E  + +A   
Sbjct: 7   IAMALAVAGIGAGQGLAQEGAGAARRAAARMEEQAQASMLLLGQARQQYSEGKYQEALDN 66

Query: 78  --EYFNQC--------SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
                            R F    +A  + +  A     AG+Y +A  L E+ +   P+ 
Sbjct: 67  YRRSLTALPKSPNMEKRRRFLETSIA-DASVAVAQEYIKAGRYDEAVKLLEDALKSTPDH 125

Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
                       + A+   ++  D   T   L              +VK          N
Sbjct: 126 ------------ALARRTLEIARDPVRTNPALS---------P--EHVKNVEE-----VN 157

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
           +L    + +   Y + G+Y AA+  F  VL        A   M  +  A
Sbjct: 158 RL----LHLAFGYYELGQYDAALKEFTSVLKTDPYNTAARRGMELVNRA 202



 Score = 38.6 bits (89), Expect = 0.96,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 35/127 (27%), Gaps = 31/127 (24%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           +  L    R +     SP               +A   V + + Y+K G Y  A+   + 
Sbjct: 61  QEALDNYRRSLTALPKSP---NMEKRRRFLETSIADASVAVAQEYIKAGRYDEAVKLLED 117

Query: 216 VLANYSDAEHAEEAMAR---------------------------LVEAYVALALMDEA-R 247
            L +  D   A   +                             L   Y  L   D A +
Sbjct: 118 ALKSTPDHALARRTLEIARDPVRTNPALSPEHVKNVEEVNRLLHLAFGYYELGQYDAALK 177

Query: 248 EVVSLIQ 254
           E  S+++
Sbjct: 178 EFTSVLK 184


>gi|118091214|ref|XP_420968.2| PREDICTED: similar to KIAA0155 [Gallus gallus]
          Length = 1265

 Score = 44.0 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 41/276 (14%), Positives = 98/276 (35%), Gaps = 39/276 (14%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
           A L RA    E   +     ++T  +++A  +    E   +  +Y + + +     + Y 
Sbjct: 574 ASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYL 633

Query: 63  K-AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           +   +   + NF +A ++F +    ++D P    +    L  A       ++       E
Sbjct: 634 RLGAMARDKGNFYEASDWFKEALQINQDHP-DAWSLIGNLHLA-----KQEWGPGQKKFE 687

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ----RATKLMLQYMSRIVERYTNSPY 174
             + Q P ++N  Y    +G  + Q +     D+    R     L    +++     + Y
Sbjct: 688 RILKQ-PSTQNDTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLY 746

Query: 175 VKGA-------RFYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVL 217
                      + Y    R+  A  +E         + +   Y+++ +Y++A+  ++  L
Sbjct: 747 AANGIGAVLAHKGYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCL 806

Query: 218 ANY---SDAEHAEEAMARLVEAYVALALMDEAREVV 250
             +    +     E +  L  A      + E ++ +
Sbjct: 807 RKFYKHQNT----EVLLYLARALFKCGKLQECKQTL 838


>gi|317486631|ref|ZP_07945448.1| N-acetylmuramoyl-L-alanine amidase [Bilophila wadsworthia 3_1_6]
 gi|316922014|gb|EFV43283.1| N-acetylmuramoyl-L-alanine amidase [Bilophila wadsworthia 3_1_6]
          Length = 558

 Score = 44.0 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 47/111 (42%), Gaps = 8/111 (7%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           +   + + Q    + E+Y        A F   +   +LA + +      L++    AA+ 
Sbjct: 69  REPWEKLAQSFFDLHEKYPRWRNRPAALFRSALAMEELAKRSM------LRQDA-QAAVD 121

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAY-VALALMDEAREVVSLIQERYPQGY 261
           R+ + L +Y+    A++A+  +             A+E ++ IQ +YP+G 
Sbjct: 122 RYGVFLKSYASHVLADDALFGIARIKAERFNDFSGAQEALNTIQNQYPRGD 172



 Score = 40.5 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 24/189 (12%), Positives = 56/189 (29%), Gaps = 46/189 (24%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLK-----------EQN 72
           L + F++A+              + D+     ++++ YEKA   ++            + 
Sbjct: 23  LLVAFALALFVTA----------FSDAHAAPSFEQQ-YEKAKQDMEFLKSDSKRGGWREP 71

Query: 73  FSKAYEYFNQCSRDFPFAGVARK--SLLMSAFVQYSAGKYQ-------QAASLGEE---Y 120
           + K  + F      +P      +  +L  SA       +          A +  +    +
Sbjct: 72  WEKLAQSFFDLHEKYP--RWRNRPAALFRSALA---MEELAKRSMLRQDAQAAVDRYGVF 126

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +  Y      D   + +    A+   D            + ++ I  +Y        A+ 
Sbjct: 127 LKSYASHVLADDALFGIARIKAERFNDFSG-------AQEALNTIQNQYPRGDVAPEAKL 179

Query: 181 YVTVGRNQL 189
           Y    +  L
Sbjct: 180 YAQRLKAAL 188


>gi|124009354|ref|ZP_01694032.1| TPR repeat [Microscilla marina ATCC 23134]
 gi|123985016|gb|EAY24967.1| TPR repeat [Microscilla marina ATCC 23134]
          Length = 220

 Score = 44.0 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 21/182 (11%), Positives = 57/182 (31%), Gaps = 39/182 (21%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           K   TI F    C L             D+    +   E+ ++     ++ +   A + +
Sbjct: 2   KLTQTICFLGIACLLFLRVSVVPGQTDNDTPPPEKSVAELLKEGEAKYQKGDILGAIKNY 61

Query: 81  NQCSRDFPFAGVARK--------------------------SLLMSAFV-----QYSAGK 109
           N       ++ +A +                          S L +A++       +   
Sbjct: 62  NAVIEKQAYSAIAYQKRARCKRRIQNYPGAIKDYEKAIQLKSELANAYIGKAQTYVAMKN 121

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           +++A       +   P  K +  ++Y  G+++ ++        +  K  +   ++ +E +
Sbjct: 122 HKKAIKDYARALDLQPPKKYLPLIHYNKGLAHLEI--------KDYKEAMTDFNKAIELH 173

Query: 170 TN 171
             
Sbjct: 174 PK 175


>gi|328952823|ref|YP_004370157.1| Extracellular ligand-binding receptor [Desulfobacca acetoxidans DSM
           11109]
 gi|328453147|gb|AEB08976.1| Extracellular ligand-binding receptor [Desulfobacca acetoxidans DSM
           11109]
          Length = 614

 Score = 44.0 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 66/212 (31%), Gaps = 46/212 (21%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPE-----SKNVDYV-YY------LVGMSYAQ 143
           +LL  A   Y A +Y +A +  E+Y+   P+        +     Y      L   +  +
Sbjct: 39  ALLQQADNFYRAHRYNEALATYEQYLQTSPQGVQWQHAWLRTAELYGIKGDWLQARARYE 98

Query: 144 MIRDVPYDQRATKLM-------------LQYMSRIVERYTNSPYVKGARFYVTVG----- 185
            I  VP D                         RI+E  T S      RF          
Sbjct: 99  RILAVPVDSGLALKARYGVGQAQYKLGNFLEAERILENLTASNLSGDLRFKTNALLTELS 158

Query: 186 -----------RNQLAAKEVEIGR--YYLKRGEYV---AAIPRFQLVLANYSDAEHAEEA 229
                      R  L  K++  G   +Y      +   AA P  + +   Y D       
Sbjct: 159 LQSRNFPQACSRLLLVEKDLPYGEEEWYQDLKSRLLERAAAPELEKLADLYRDTPLTPAL 218

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           + +L+         ++A E ++ +Q R+PQ  
Sbjct: 219 LLQLIRLETQAGRPEKAEEWLATLQRRFPQSP 250


>gi|225871857|ref|YP_002753311.1| TPR domain protein [Acidobacterium capsulatum ATCC 51196]
 gi|225793226|gb|ACO33316.1| TPR domain protein [Acidobacterium capsulatum ATCC 51196]
          Length = 436

 Score = 44.0 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 51/198 (25%), Gaps = 34/198 (17%)

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
           E   ++A     +  +  P          M A     +G   +AA+L  + I   P + +
Sbjct: 261 EGKLTEAIASLEKLHQLHPHNP---TVANMLADAYLQSGDMDKAAALYPQVIAAQPGNTD 317

Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
                    +     +      Q+     +    + ++          A   V    N+ 
Sbjct: 318 --------ALDSYGQVLIR---QKRFPEAVSTFQQALKAQPGDI---DALSGVAFASNET 363

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
              + EI           A   R QL         +    +  L  AY  L    +A   
Sbjct: 364 GQYQQEIA----------ALEQRAQL-------TPNTPATLFLLATAYDHLRQYKQAASY 406

Query: 250 VSLIQERYPQGYWARYVE 267
                   P   +A    
Sbjct: 407 YHQFLASNPGPQFANQTW 424


>gi|120437738|ref|YP_863424.1| aerotolerance-related protein BatE [Gramella forsetii KT0803]
 gi|117579888|emb|CAL68357.1| aerotolerance-related protein BatE [Gramella forsetii KT0803]
          Length = 249

 Score = 44.0 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 6/73 (8%), Positives = 23/73 (31%), Gaps = 3/73 (4%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            +++E+A    +  ++  A   +     +   +    +         Y       +    
Sbjct: 21  EDLFEEANSAYQSGDYEVAVSKYEAILANNETSA---EVYFNLGNAHYKMNHVAPSIYYY 77

Query: 118 EEYITQYPESKNV 130
           E+ +   P  +++
Sbjct: 78  EKALQLDPTDEDI 90


>gi|26345382|dbj|BAC36342.1| unnamed protein product [Mus musculus]
          Length = 409

 Score = 44.0 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 33/68 (48%), Gaps = 6/68 (8%)

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           F  Y  G+Y +A    + Y+  +P++++V     L  + + + + D   D  A+    + 
Sbjct: 15  FAYYRVGEYVKALECAKAYLMFHPDNEDV-----LDNVDFYESLLDDSTDP-ASIEARED 68

Query: 162 MSRIVERY 169
           ++  V+R+
Sbjct: 69  LTAFVKRH 76


>gi|309388802|gb|ADO76682.1| Tetratricopeptide TPR_1 repeat-containing protein [Halanaerobium
           praevalens DSM 2228]
          Length = 429

 Score = 44.0 bits (103), Expect = 0.025,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 52/135 (38%), Gaps = 8/135 (5%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
           +     +  ++  + + +++++  A+ +    ++  + + FN          + R+SL +
Sbjct: 292 KTKEELISANNYLETKTEQQLFNLALDYFSRSDYQNSSDIFNSIYNLSETDYLKRESLFL 351

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
            A        YQ A      Y+ +YPES   D   Y +G+   +            K   
Sbjct: 352 LARSYEKMEAYQSAEHFYRIYLNEYPESNYYDEALYNLGLMLEEA--------GLEKKSK 403

Query: 160 QYMSRIVERYTNSPY 174
           + ++R+ E    S Y
Sbjct: 404 EILTRLREEVPYSKY 418



 Score = 43.2 bits (101), Expect = 0.038,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 35/75 (46%), Gaps = 1/75 (1%)

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            R Y K   Y +A   +++ L  Y ++ + +EA+  L        L  +++E+++ ++E 
Sbjct: 353 ARSYEKMEAYQSAEHFYRIYLNEYPESNYYDEALYNLGLMLEEAGLEKKSKEILTRLREE 412

Query: 257 YPQGYW-ARYVETLV 270
            P   +    V  ++
Sbjct: 413 VPYSKYNNSKVYNIL 427


>gi|317178017|dbj|BAJ55806.1| paralysed flagella protein [Helicobacter pylori F16]
          Length = 803

 Score = 44.0 bits (103), Expect = 0.025,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 48/137 (35%), Gaps = 9/137 (6%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             +T   Y    Y +A   +  Q +  A    ++  +++P     +   L+        G
Sbjct: 188 PLLTTKGYDLNAYLEAKKQINSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIALGQLG 247

Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            K      +G ++I  YP   ++    Y V  +  +            K  + Y  RI+ 
Sbjct: 248 IKKSLLIDIGTKWIKNYPTDPSIPEALYYVAKALDEN--------NNYKQAMHYYKRILL 299

Query: 168 RYTNSPYVKGARFYVTV 184
            Y +S Y   A+  + +
Sbjct: 300 EYKDSRYAPLAQMRLAI 316



 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 31/99 (31%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
             + RA   +    ++   + L I     +                +  TD      +Y 
Sbjct: 217 RTISRAFKNYPQTIFKKDLYLLEIIALGQLGIKKSLLIDIGTKWIKNYPTDPSIPEALYY 276

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
            A    +  N+ +A  Y+ +   ++  +  A  + +  A
Sbjct: 277 VAKALDENNNYKQAMHYYKRILLEYKDSRYAPLAQMRLA 315



 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 15/47 (31%)

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
           + NY       EA+  + +A        +A      I   Y    +A
Sbjct: 261 IKNYPTDPSIPEALYYVAKALDENNNYKQAMHYYKRILLEYKDSRYA 307


>gi|160883870|ref|ZP_02064873.1| hypothetical protein BACOVA_01843 [Bacteroides ovatus ATCC 8483]
 gi|293370498|ref|ZP_06617051.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CMC 3f]
 gi|156110600|gb|EDO12345.1| hypothetical protein BACOVA_01843 [Bacteroides ovatus ATCC 8483]
 gi|292634490|gb|EFF53026.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CMC 3f]
          Length = 597

 Score = 44.0 bits (103), Expect = 0.025,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 63/198 (31%), Gaps = 36/198 (18%)

Query: 61  YEKAVLFL--KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           Y + ++ L  ++    KA     +    FP       SLL          KY    S   
Sbjct: 129 YSQGLVSLYQQQNELDKAAALLEKMVTRFPSKQDPLFSLLDI---YSRQEKYNDVISTLN 185

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
               +  +++ +    + +   Y QM  D        K   Q +  +V+ Y         
Sbjct: 186 RLEKRLGKNEQLSMEKFRI---YLQMKDD--------KKAFQEIESLVQEYP-------- 226

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
              + +        +V +G  YL+ G+   A   +Q VLA   D      A+  +   Y 
Sbjct: 227 ---MDM------RYQVILGDVYLQNGKKQEAYDAYQKVLAVEPD---NPMALFSMASYYE 274

Query: 239 ALALMDEAREVVSLIQER 256
                +  ++ +  +   
Sbjct: 275 QTGQKELYQQQLDTLLLN 292


>gi|15126637|gb|AAH12250.1| Intraflagellar transport 88 homolog (Chlamydomonas) [Mus musculus]
          Length = 824

 Score = 44.0 bits (103), Expect = 0.025,   Method: Composition-based stats.
 Identities = 33/259 (12%), Positives = 76/259 (29%), Gaps = 55/259 (21%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLM 99
           Q+S    L   +D      +  K        ++ KA E++      D   +     +L  
Sbjct: 468 QASSYADLAVNSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYN 523

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY-------------AQMIR 146
                    +  +A    + ++  +   +N   V   +   Y              Q+I 
Sbjct: 524 IGLTYKKLNRLDEAL---DSFLKLHAILRNSAQVLCQIANIYELMEDPNQAIEWLMQLIS 580

Query: 147 DVPYDQRATKL-------------MLQYMSRIVERYT--------------NSPYVKGAR 179
            VP D +A                  QY       +               ++ + + A 
Sbjct: 581 VVPTDSQALSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAI 640

Query: 180 FYVT---VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
            Y     + +      ++ +   + + G Y  A+  ++ +   + +     E +  LV  
Sbjct: 641 QYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKEIHRKFPE---NVECLRFLVRL 697

Query: 237 YVALALMDEAREVVSLIQE 255
              + L  E +E  + ++ 
Sbjct: 698 CTEIGLK-EVQEYATKLKR 715


>gi|897806|emb|CAA61596.1| protein phosphatase T [Saccharomyces cerevisiae]
          Length = 408

 Score = 44.0 bits (103), Expect = 0.025,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 50/133 (37%), Gaps = 20/133 (15%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLL--MSAFVQY 105
            +  D     E   +  +F+KE++F KA E +      D      + +S+     AF  +
Sbjct: 4   PTAADRAKALERKNEGNVFVKEKHFLKAIEKYTEAIDLD------STQSIYFSNRAFAHF 57

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               +Q A +  +E I   P++      Y+   +S   ++          K   + ++ +
Sbjct: 58  KVDNFQSALNDCDEAIKLDPKNIK---AYHRRALSCMALLE--------FKKARKDLNVL 106

Query: 166 VERYTNSPYVKGA 178
           ++   N P    A
Sbjct: 107 LKAKPNDPAATKA 119


>gi|198462498|ref|XP_001352454.2| GA15373 [Drosophila pseudoobscura pseudoobscura]
 gi|198150850|gb|EAL29950.2| GA15373 [Drosophila pseudoobscura pseudoobscura]
          Length = 1193

 Score = 44.0 bits (103), Expect = 0.025,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 53/141 (37%), Gaps = 24/141 (17%)

Query: 133 VYYLVGMSYAQM------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------R 179
            Y L+ +    +       RD   +++  +  L    +++     + +           +
Sbjct: 601 AYSLIALGNFSLQTLHQPSRDKEKERKHQEKALAIFKQVLRNDPRNIWATNGIGAVLAHK 660

Query: 180 FYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
             V   R+  A  +E         + I   Y+++ +Y++AI  ++  +  +    +  E 
Sbjct: 661 GCVIEARDIFAQVREATADFSDVWLNIAHVYVEQKQYISAIQMYENCMKKFYKHNNV-EV 719

Query: 230 MARLVEAYVALALMDEAREVV 250
           M  L  AY+    + EA+ V+
Sbjct: 720 MQYLARAYLRANKLVEAKAVL 740


>gi|296328304|ref|ZP_06870833.1| tetratricopeptide repeat family protein [Fusobacterium nucleatum
           subsp. nucleatum ATCC 23726]
 gi|296154608|gb|EFG95396.1| tetratricopeptide repeat family protein [Fusobacterium nucleatum
           subsp. nucleatum ATCC 23726]
          Length = 936

 Score = 44.0 bits (103), Expect = 0.025,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 47/129 (36%), Gaps = 11/129 (8%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           Q+  +  A  FL ++N   A + + +   +  +      S++    V Y+   Y +A   
Sbjct: 127 QKTFFAVAQNFLAKENNEAAQKAYKEIIDN-KYENYKE-SMMGLGIVYYNLKDYDKAIYW 184

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
             E+  + P+ +N + V YL   +  +           T   +     +     ++ Y +
Sbjct: 185 LSEFSKEMPK-ENKEMVSYLKASALYRK--------GNTDEAISRFEELANVEPSTEYSR 235

Query: 177 GARFYVTVG 185
            A  Y+   
Sbjct: 236 KAALYLIEI 244



 Score = 42.4 bits (99), Expect = 0.070,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 69/206 (33%), Gaps = 33/206 (16%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y K +  +    + +A   F +       + ++ K  L      + A +Y +A   GE+Y
Sbjct: 508 YLKGIAAMGLGKYDEAESEFQKVLASGDQS-LSTKVYLNRVRNYFLAERYNEAVQAGEQY 566

Query: 121 ITQYPESKNVDYVYY-----LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
           +++   S + D V Y      +G+SY ++ +   YDQ                   S Y 
Sbjct: 567 LSK--LSPDKDKVIYSEMLDKIGLSYFRLGK---YDQAR-----------------SYYS 604

Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
           K A         +      +I   Y     Y  A   ++ V   + +  + E+A  + + 
Sbjct: 605 KIASMKGYEAYGK-----FQIADSYYNEKNYEKAASLYKEVYNQFGETFYGEQAYYKYIM 659

Query: 236 AYVALALMDEAREVVSLIQERYPQGY 261
                   +      +   + YP   
Sbjct: 660 TLSLTGNTEAFEREKNNFMKVYPNSN 685


>gi|225164718|ref|ZP_03726953.1| tetratricopeptide TPR_4 protein [Opitutaceae bacterium TAV2]
 gi|224800664|gb|EEG19025.1| tetratricopeptide TPR_4 protein [Opitutaceae bacterium TAV2]
          Length = 873

 Score = 44.0 bits (103), Expect = 0.025,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 59/206 (28%), Gaps = 28/206 (13%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
             R +  +A       N ++A     +   D   +    +S ++ A      G   +A  
Sbjct: 579 PARSLLLQAEANFALGNPAEAVAQLRKLRTDAQDSDTKMRSFIVEADYYARTGNLAEAQR 638

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP-- 173
           L       Y  S       Y   +  A+   +        +   + + R+ + Y  S   
Sbjct: 639 LMTSLADDYRTSSYAPEALYQAALHAARRGGE-----EHIREAYRLLERLAKDYPASDLV 693

Query: 174 -YVKG-----ARFYVTVGRNQLAAKEVEIGRYYLKRG---EYVAAIP--RFQLVLANYSD 222
            Y +      AR Y      QLA  E  I  Y         ++A     R +       D
Sbjct: 694 FYARMKQGDLAREYNNFSDAQLA-YEYLINNYSQHADVLAAHLALANCHRARSAP---PD 749

Query: 223 AEHAEEAMARLVEAYVALALMDEARE 248
             H E A+           L D A  
Sbjct: 750 VSHYESALTIYER------LRDLADT 769


>gi|258647260|ref|ZP_05734729.1| putative BatD protein [Prevotella tannerae ATCC 51259]
 gi|260852909|gb|EEX72778.1| putative BatD protein [Prevotella tannerae ATCC 51259]
          Length = 874

 Score = 44.0 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 9/69 (13%), Positives = 21/69 (30%), Gaps = 4/69 (5%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            +      + ++  A   F + ++  P    +  S        Y      QA    E  +
Sbjct: 652 AEGETLYAKHDYIGAVAAFERTAKANP----SAASYYNLGNAYYRTRNLPQAILYYERAL 707

Query: 122 TQYPESKNV 130
              P + ++
Sbjct: 708 RLSPTNADI 716


>gi|157827039|ref|YP_001496103.1| TPR repeat-containing protein kinase [Rickettsia bellii OSU 85-389]
 gi|157802343|gb|ABV79066.1| tetratricopeptide repeat/protein kinase domain protein [Rickettsia
           bellii OSU 85-389]
          Length = 367

 Score = 44.0 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 39/120 (32%), Gaps = 18/120 (15%)

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y  G  ++A     + I   P   N    YY  G+ ++ M     + Q          
Sbjct: 26  SFYFLGSPEKAIEAYTQVIKLNPNCAN---AYYNRGIVHSSM---YSHSQGHALQGYDDF 79

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
            +++E   N      A  Y   G   LA     +GR   +   Y+A +  +   +    +
Sbjct: 80  KKVIEINPN-----DAEAYFHDGNRSLA----VLGR---RPEAYMATLEAYNYAIKLNPN 127


>gi|256026723|ref|ZP_05440557.1| hypothetical protein PrD11_01786 [Fusobacterium sp. D11]
 gi|289764719|ref|ZP_06524097.1| conserved hypothetical protein [Fusobacterium sp. D11]
 gi|289716274|gb|EFD80286.1| conserved hypothetical protein [Fusobacterium sp. D11]
          Length = 423

 Score = 44.0 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 7/65 (10%)

Query: 214 QLVLANYSDAEHAE-------EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
           ++ + N+  +   E       E    +  +Y  L    E  + + L+++ +P   WA+  
Sbjct: 356 RVAIENFKKSLSTEKMQDKKPEIYYNIASSYAKLGNKVEVTKYLRLLKQEFPNSEWAKKS 415

Query: 267 ETLVK 271
           E L K
Sbjct: 416 EVLTK 420


>gi|189220044|ref|YP_001940684.1| TPR repeats containing protein [Methylacidiphilum infernorum V4]
 gi|189186902|gb|ACD84087.1| TPR repeats containing protein [Methylacidiphilum infernorum V4]
          Length = 647

 Score = 44.0 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 35/88 (39%), Gaps = 11/88 (12%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAFVQYSAGKYQQAAS 115
           +++ ++A      Q++ +A E + Q    FP +    A         + Y  G+ ++A +
Sbjct: 468 QKLVDEASTLFSGQHYQEAAEKYRQILEKFPNSVTAWA-----NLGVIYYQQGQLKEAEN 522

Query: 116 LGEEYITQYPE----SKNVDYVYYLVGM 139
              + +   P        +  VYY  G+
Sbjct: 523 ALAQALKLNPNDAFSHSILGIVYYQEGL 550


>gi|255525769|ref|ZP_05392699.1| TPR repeat-containing protein [Clostridium carboxidivorans P7]
 gi|296186324|ref|ZP_06854728.1| tetratricopeptide repeat protein [Clostridium carboxidivorans P7]
 gi|255510502|gb|EET86812.1| TPR repeat-containing protein [Clostridium carboxidivorans P7]
 gi|296049125|gb|EFG88555.1| tetratricopeptide repeat protein [Clostridium carboxidivorans P7]
          Length = 257

 Score = 44.0 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 30/211 (14%), Positives = 69/211 (32%), Gaps = 38/211 (18%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           + +Y    + +  +F   + +SKA + F +     P     + +    A   Y   +Y++
Sbjct: 48  NSKYIDAYFNRGEVFRSLKEYSKAIKDFIRVIELNP---KDKDAYNNMAVAYYENREYEK 104

Query: 113 AASLGEEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           A     + I    + +N  Y  Y+  G++Y    +            ++   + +     
Sbjct: 105 ALDSYTKVIEL--DHEN--YNAYFNRGLTYKAQNK--------YHKAIKDFYKTIVLNPE 152

Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
                                    G  Y   G+Y  A+  +   +    D+++ E+A  
Sbjct: 153 DKEAY-----------------FNRGIIYYNTGKYNKAVEDYTKAIEI--DSKY-EDAYN 192

Query: 232 RLVEAYVALALMDEA-REVVSLIQERYPQGY 261
               A+  +    EA  + + +I+   P   
Sbjct: 193 NRGTAFYLIGKYKEAIEDYIKVIKLN-PNSS 222



 Score = 40.1 bits (93), Expect = 0.29,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 33/92 (35%), Gaps = 9/92 (9%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMS 100
           +D Y   V +   +   + + +++     ++KA E + +       +        +    
Sbjct: 141 KDFYKTIVLNPEDKEAYFNRGIIYYNTGKYNKAVEDYTKAIEIDSKY------EDAYNNR 194

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
               Y  GKY++A     + I   P S  + Y
Sbjct: 195 GTAFYLIGKYKEAIEDYIKVIKLNPNSSEIYY 226


>gi|218438956|ref|YP_002377285.1| heat shock protein DnaJ domain protein [Cyanothece sp. PCC 7424]
 gi|218171684|gb|ACK70417.1| heat shock protein DnaJ domain protein [Cyanothece sp. PCC 7424]
          Length = 424

 Score = 44.0 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 50/149 (33%), Gaps = 24/149 (16%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQY 105
              S        + Y + +  ++ Q++ +A + F +     P F      + L      Y
Sbjct: 75  VDPSSPSPLTAEDYYRQGLTKIQRQSYLEAIKNFTKAIELNPNFLE----AYLRRIEAFY 130

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
            +GK +Q     ++ +  +P   N    YY +G S  ++          T+  ++  S+ 
Sbjct: 131 KSGKDRQVLEDCQKVLQIHP---NCSQAYYYLGCSRQRL--------GYTQSAIEAYSQA 179

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEV 194
           +       Y              LA  E+
Sbjct: 180 IFYQP---YEAE-----FYHHRGLAYHEL 200


>gi|209882953|ref|XP_002142911.1| serine/threonine protein phosphatase [Cryptosporidium muris RN66]
 gi|209558517|gb|EEA08562.1| serine/threonine protein phosphatase, putative [Cryptosporidium
           muris RN66]
          Length = 537

 Score = 44.0 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 33/101 (32%), Gaps = 23/101 (22%)

Query: 59  EVYE-KAVLFLKEQNFSKAYEYFNQC------------SRDFPFAGVARKSLLMSAFVQY 105
           E+Y+ K     +E N+ +A EY++                   +   + ++L        
Sbjct: 15  EIYKGKGNASFQEGNYLEAVEYYSMAINASISATNASNENLHVY--YSNRAL-----CNI 67

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
               Y  A    E  I   P        YY  G++Y  + R
Sbjct: 68  RLENYGSAIIDAEASIDLCPTYSK---AYYRRGVAYLNLFR 105


>gi|308062558|gb|ADO04446.1| paralysed flagella protein [Helicobacter pylori Cuz20]
          Length = 803

 Score = 44.0 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 50/137 (36%), Gaps = 9/137 (6%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             +T   Y    Y +A   +  Q +  A    ++  +++P     +   L+        G
Sbjct: 188 PLLTTKGYDLNAYLEAKKQINSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIALGQLG 247

Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            K      +G ++I  YP   ++  V Y V  +  +            K  ++Y  RI+ 
Sbjct: 248 IKKSLLIDIGTKWIKNYPTDPSIPEVLYYVAKALDEN--------NNYKQAMRYYKRILL 299

Query: 168 RYTNSPYVKGARFYVTV 184
            Y NS Y   A+  + +
Sbjct: 300 EYKNSRYAPLAQMRLAI 316



 Score = 42.8 bits (100), Expect = 0.053,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 31/99 (31%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
             + RA   +    ++   + L I     +                +  TD      +Y 
Sbjct: 217 RTISRAFKNYPQTIFKKDLYLLEIIALGQLGIKKSLLIDIGTKWIKNYPTDPSIPEVLYY 276

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
            A    +  N+ +A  Y+ +   ++  +  A  + +  A
Sbjct: 277 VAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRLA 315


>gi|237745073|ref|ZP_04575554.1| conserved hypothetical protein [Fusobacterium sp. 7_1]
 gi|260494851|ref|ZP_05814981.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33]
 gi|229432302|gb|EEO42514.1| conserved hypothetical protein [Fusobacterium sp. 7_1]
 gi|260198013|gb|EEW95530.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33]
          Length = 423

 Score = 44.0 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 7/65 (10%)

Query: 214 QLVLANYSDAEHAE-------EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
           ++ + N+  +   E       E    +  +Y  L    E  + + L+++ +P   WA+  
Sbjct: 356 RVAIENFKKSLSTEKMQDKKPEIYYNIASSYAKLGNKVEVTKYLRLLKQEFPNSEWAKKS 415

Query: 267 ETLVK 271
           E L K
Sbjct: 416 EVLTK 420


>gi|310778297|ref|YP_003966630.1| Lytic transglycosylase catalytic [Ilyobacter polytropus DSM 2926]
 gi|309747620|gb|ADO82282.1| Lytic transglycosylase catalytic [Ilyobacter polytropus DSM 2926]
          Length = 630

 Score = 43.6 bits (102), Expect = 0.026,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 58/183 (31%), Gaps = 25/183 (13%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K    I  +I        +  + +D             +++     FL + N+  A  
Sbjct: 1   MKKILFFIILAINSLISFAADDVNIKDY------------KIFASGKNFLSQNNYKDALT 48

Query: 79  YFNQCSRDFPFAGV--ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            F   S  +P + +  +  +        Y+ G Y  A +  E  I   P+    +  Y+ 
Sbjct: 49  QFELLSEKYPESLLFKSNYANYYIGITYYNLGDYDNARNFLERAIYT-PKDFKAEDPYFQ 107

Query: 137 VGMSYA------QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
               +         +  +  +Q      L++   +V+ Y    Y K    Y  +   +L 
Sbjct: 108 KSKKHLFEYKRNYYLAKIYLEQGLKDEALKHFKFLVKNY----YSKELETYEKMALKELE 163

Query: 191 AKE 193
             +
Sbjct: 164 KHD 166


>gi|188501570|gb|ACD54697.1| TPR repeat containing protein-like protein [Adineta vaga]
          Length = 790

 Score = 43.6 bits (102), Expect = 0.026,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 50/124 (40%), Gaps = 13/124 (10%)

Query: 60  VYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF-----VQYSAGKYQQA 113
           +Y +  ++      + +A +Y+ +       +  +  + L S++     + ++ G+YQ+A
Sbjct: 443 IYNELGLIKNNRGEYVEAIKYYEKAIAIQQQSLYSNHTDLASSYNNIGLMYHNMGEYQKA 502

Query: 114 ASLGEEYI-----TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR-IVE 167
            S  E+ +     +  P   ++   Y  +G  Y +M  D P      +  L    + +  
Sbjct: 503 LSYYEKSLTIQQQSLLPNHPDLAASYNNIGSVYYKM-DDYPKALSYYEKSLVIRQQSLPS 561

Query: 168 RYTN 171
            + +
Sbjct: 562 NHPD 565


>gi|165923888|ref|ZP_02219720.1| tetratricopeptide repeat protein/methyltransferase [Coxiella
           burnetii RSA 334]
 gi|165916673|gb|EDR35277.1| tetratricopeptide repeat protein/methyltransferase [Coxiella
           burnetii RSA 334]
          Length = 561

 Score = 43.6 bits (102), Expect = 0.026,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 49/182 (26%), Gaps = 49/182 (26%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A +++   +FSKA  Y+ +     P       +            ++Q+A       +  
Sbjct: 179 AHVYMYLGDFSKAITYYEKRLALEPENA---DAQYDCGLAHLKDNQFQKAIDYFTNALLL 235

Query: 124 YPESKNVDY----VYYLVG------MSYAQMIRDVPYD------------QRATKLMLQY 161
            PE  +  Y     Y   G      + Y + +   P              Q   +  + Y
Sbjct: 236 NPEHPDCHYSLATAYLQRGDHKEALIHYLRQLEKKPQIECYYNVGVLHMYQERHREAIDY 295

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
             + +    N                      + I   YLK       I + +  + +Y 
Sbjct: 296 FKQALTLDPNYREA-----------------HLNIAAVYLK-------INQIKQAIEHYE 331

Query: 222 DA 223
             
Sbjct: 332 ST 333


>gi|225431627|ref|XP_002262727.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|296088538|emb|CBI37529.3| unnamed protein product [Vitis vinifera]
          Length = 217

 Score = 43.6 bits (102), Expect = 0.026,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 32/82 (39%), Gaps = 6/82 (7%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF---PFAGVARKS 96
             + RD   D    V     + EK      + +F +A +YF Q   ++    F+  AR  
Sbjct: 68  SPNERDASADVSQRVSEAVSLLEKGRELQAQGDFERALQYFTQVVNNYKDFAFSDYAR-- 125

Query: 97  LLMSAFVQYSAGKYQQAASLGE 118
            +  A   Y  G  Q+A +  E
Sbjct: 126 -VGRALALYEVGDRQEAIAEME 146


>gi|15894350|ref|NP_347699.1| TPR repeat-containing protein [Clostridium acetobutylicum ATCC 824]
 gi|15023978|gb|AAK79039.1|AE007622_1 TPR-repeat-containing protein [Clostridium acetobutylicum ATCC 824]
 gi|325508478|gb|ADZ20114.1| TPR-repeat-containing protein [Clostridium acetobutylicum EA 2018]
          Length = 254

 Score = 43.6 bits (102), Expect = 0.026,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 58/169 (34%), Gaps = 22/169 (13%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
            +++E+   +    +++KA EYF    + S++  F                +  K+++A 
Sbjct: 4   EKIFEEGEEYYVNGDYNKALEYFQNGYKISKNEDFLNY-------IGCCYLNLNKFEEAI 56

Query: 115 SLGEEYITQYPESK----NVDYVY-----YLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
           S  EE +  YPE +    N+  VY     Y   + Y      +  D         Y    
Sbjct: 57  STFEELMQVYPEWERPVFNLGRVYLKLELYQEALDYFNKALVINPDDEDVYF---YFGIY 113

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
            E+  +       +              + +G  YL+  +Y  AI  F 
Sbjct: 114 FEKKRDYKNAICCQKKSLRLNKFQPETHLHLGLCYLRTNKYNEAIVEFD 162


>gi|153207820|ref|ZP_01946420.1| tetratricopeptide repeat protein/methyltransferase [Coxiella
           burnetii 'MSU Goat Q177']
 gi|212218831|ref|YP_002305618.1| tetratricopeptide repeat family protein [Coxiella burnetii
           CbuK_Q154]
 gi|120576372|gb|EAX32996.1| tetratricopeptide repeat protein/methyltransferase [Coxiella
           burnetii 'MSU Goat Q177']
 gi|212013093|gb|ACJ20473.1| tetratricopeptide repeat family protein [Coxiella burnetii
           CbuK_Q154]
          Length = 561

 Score = 43.6 bits (102), Expect = 0.027,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 49/182 (26%), Gaps = 49/182 (26%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A +++   +FSKA  Y+ +     P       +            ++Q+A       +  
Sbjct: 179 AHVYMYLGDFSKAITYYEKRLALEPENA---DAQYDCGLAHLKDNQFQKAIDYFTNALLL 235

Query: 124 YPESKNVDY----VYYLVG------MSYAQMIRDVPYD------------QRATKLMLQY 161
            PE  +  Y     Y   G      + Y + +   P              Q   +  + Y
Sbjct: 236 NPEHPDCHYSLATAYLQRGDHKEALIHYLRQLEKKPQIECYYNVGVLHMYQERHREAIDY 295

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
             + +    N                      + I   YLK       I + +  + +Y 
Sbjct: 296 FKQALTLDPNYREA-----------------HLNIAAVYLK-------INQIKQAIEHYE 331

Query: 222 DA 223
             
Sbjct: 332 ST 333


>gi|254423378|ref|ZP_05037096.1| O-Antigen Polymerase family [Synechococcus sp. PCC 7335]
 gi|196190867|gb|EDX85831.1| O-Antigen Polymerase family [Synechococcus sp. PCC 7335]
          Length = 845

 Score = 43.6 bits (102), Expect = 0.027,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 53/158 (33%), Gaps = 30/158 (18%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE-----------KAVLFLK 69
           +F   ++ S+A    V      S D      +DV      Y            K     K
Sbjct: 477 RFDTGLYLSLAAANDVKNGNVVSADAKWSRASDVVGWDPTYAVLAAERLVKLRKGAANQK 536

Query: 70  EQN--FSKAYEYFNQCSRDFPFAGVARK--SLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
           +++   + A EY     R  P      +  + L+        G+ + A S  E  ++  P
Sbjct: 537 DKDILTASAIEYLESAIRSAPNDPWFNQNIATLLI-----QNGRAEAAESYAERAVSLIP 591

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
            S+N  Y YY +G+SY         DQ  T       S
Sbjct: 592 RSRN--YTYYTLGLSY--------LDQGKTNQATSAFS 619


>gi|195586887|ref|XP_002083199.1| GD13607 [Drosophila simulans]
 gi|194195208|gb|EDX08784.1| GD13607 [Drosophila simulans]
          Length = 612

 Score = 43.6 bits (102), Expect = 0.027,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 53/141 (37%), Gaps = 24/141 (17%)

Query: 133 VYYLVGMSYAQM------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------R 179
            Y L+ +    +       RD   +++  +  L    +++     + +           +
Sbjct: 62  AYSLIALGNFSLQTLHQPSRDKEKERKHQEKALAIFKQVLRNDPRNIWATNGIGAVLAHK 121

Query: 180 FYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
             V   R+  A  +E         + I   Y+++ +Y++AI  ++  +  +    +  E 
Sbjct: 122 GCVIEARDIFAQVREATADFCDVWLNIAHVYVEQKQYISAIQMYENCMKKFYKHNNV-EV 180

Query: 230 MARLVEAYVALALMDEAREVV 250
           M  L  AY+    + +A+ V+
Sbjct: 181 MQYLARAYLRANKLVDAKAVL 201


>gi|17228384|ref|NP_484932.1| hypothetical protein all0889 [Nostoc sp. PCC 7120]
 gi|17130234|dbj|BAB72846.1| all0889 [Nostoc sp. PCC 7120]
          Length = 605

 Score = 43.6 bits (102), Expect = 0.027,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 76/221 (34%), Gaps = 38/221 (17%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAF 102
           D  L S  +       Y + +    + N+ +A     Q  +  P+  A  + +  +    
Sbjct: 135 DPLLASNINEDIANAYYYRGLNNNDQGNYQEAIIDLQQALQWHPYFAAAYSIRGNI---- 190

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y  G+Y+QA +  E  +       N+   Y   G ++  +         A +  +   
Sbjct: 191 -YYKLGEYRQAIADHERAVQL---DPNLAEAYQNRGNAHYAL--------GAYQKAIADY 238

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY-------------YLKRGEYVAA 209
           +R +E    +P+  GA +   +    L   +     +             Y +RG    A
Sbjct: 239 NRTLEI---NPHQVGAYYNRGLISFYLHEYQQAFADFNQVLNFNPNDAQAYYQRGLIYEA 295

Query: 210 IPRFQLVLANYSDAEH--AEEAMARLVEA--YVALALMDEA 246
              +Q  LA+Y+ +    +E A+   V A  Y  L     A
Sbjct: 296 WQDYQSALADYNQSLQLNSELAVVYGVRANIYRHLGDYPSA 336



 Score = 35.9 bits (82), Expect = 6.8,   Method: Composition-based stats.
 Identities = 26/205 (12%), Positives = 60/205 (29%), Gaps = 66/205 (32%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE---- 126
           +++  A  +FN      P    A ++    A  +Y    +  A +  ++ +   P     
Sbjct: 51  KDYQGAIAFFNLAVEINP--NYA-QAYYHRANARYCLADFTAAIADYDQALQINPTFAEY 107

Query: 127 -----------------------------------SKNVDYVYYLVGMSYAQMIRDVPYD 151
                                              ++++   YY  G++          D
Sbjct: 108 YYCRGNAYLAQGDYDQAIANYISTIEFDPLLASNINEDIANAYYYRGLNN--------ND 159

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGA-------RFYVTVGRNQLAAKEVEI------GR 198
           Q   +  +  + + ++ +    Y   A        + +   R  +A  E  +        
Sbjct: 160 QGNYQEAIIDLQQALQWHP---YFAAAYSIRGNIYYKLGEYRQAIADHERAVQLDPNLAE 216

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDA 223
            Y  RG    A+  +Q  +A+Y+  
Sbjct: 217 AYQNRGNAHYALGAYQKAIADYNRT 241



 Score = 35.5 bits (81), Expect = 8.5,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 62/182 (34%), Gaps = 38/182 (20%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
              Y +  L   +QN+  A   + Q     P +    +     A  +Y+   YQ A +  
Sbjct: 454 EAYYNRGSLHYDQQNYRSAIADYTQALELQPESA---RYYSDRAHARYALQDYQGAVADY 510

Query: 118 EEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
            + I   P      Y   +Y  G S+  +           +  L  +++ ++ + +  + 
Sbjct: 511 TQSIAINPG-----YAEDWYNRGRSHLLL--------GYLEEALADLNQALKFHPH--WA 555

Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS---DAEHAEEAMAR 232
                   + RN               RG+Y AAI  FQ     YS   + ++ ++ +  
Sbjct: 556 SAYLLRADILRN---------------RGDYQAAIADFQKSADLYSQEGNTQNYQQILEI 600

Query: 233 LV 234
           + 
Sbjct: 601 IA 602


>gi|330806375|ref|XP_003291146.1| hypothetical protein DICPUDRAFT_155712 [Dictyostelium purpureum]
 gi|325078707|gb|EGC32344.1| hypothetical protein DICPUDRAFT_155712 [Dictyostelium purpureum]
          Length = 1008

 Score = 43.6 bits (102), Expect = 0.027,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 67/192 (34%), Gaps = 45/192 (23%)

Query: 73  FSKAYEYFNQCSRDFPFAG-VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           +S + EY++        +   A K  LM     +   KYQ A +   + I   P+     
Sbjct: 483 WSDSEEYYSLIKSS--SSENWAAKEKLM-GNQNFQEKKYQSALAHYSKAIKLNPDDP--- 536

Query: 132 YVYYL-VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
            +YY   G+ Y ++ R            +   S  +++                      
Sbjct: 537 -IYYSNRGIVYYKLNR--------FFEAITDFSISIDKQP-------------------- 567

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYS-DAEHAEEAMARLVEAYVALALMDEAREV 249
            K+ ++   YL+R    AAI  +   + ++    ++  E++  L   Y +L  ++   ++
Sbjct: 568 -KQFKV---YLRRASSYAAIGDYTNAIRDFKAGLKYEPESIDLLEGLYKSLKCIEL--DL 621

Query: 250 VSLIQERYPQGY 261
              I    PQ  
Sbjct: 622 KRRITAN-PQSN 632


>gi|317181000|dbj|BAJ58786.1| paralysed flagella protein [Helicobacter pylori F32]
          Length = 803

 Score = 43.6 bits (102), Expect = 0.027,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 50/137 (36%), Gaps = 9/137 (6%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             +T   Y    Y +A   +  Q +  A    ++  +++P     +   L+        G
Sbjct: 188 PLLTTKGYDLNAYLEAKKQINSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIALGQLG 247

Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            K      +G ++I  YP   ++  V Y V  +  +            K  ++Y  RI+ 
Sbjct: 248 IKKSLLIDIGTKWIKNYPTDPSIPEVLYYVAKALDEN--------NNYKQAMRYYKRILL 299

Query: 168 RYTNSPYVKGARFYVTV 184
            Y NS Y   A+  + +
Sbjct: 300 EYKNSRYAPLAQMRLAI 316



 Score = 42.8 bits (100), Expect = 0.055,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 31/99 (31%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
             + RA   +    ++   + L I     +                +  TD      +Y 
Sbjct: 217 RTISRAFKNYPQTIFKKDLYLLEIIALGQLGIKKSLLIDIGTKWIKNYPTDPSIPEVLYY 276

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
            A    +  N+ +A  Y+ +   ++  +  A  + +  A
Sbjct: 277 VAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRLA 315


>gi|300313325|ref|YP_003777417.1| lipoprotein [Herbaspirillum seropedicae SmR1]
 gi|300076110|gb|ADJ65509.1| lipoprotein [Herbaspirillum seropedicae SmR1]
          Length = 200

 Score = 43.6 bits (102), Expect = 0.027,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 33/106 (31%), Gaps = 9/106 (8%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            I  ++ V  L G      +    D   +   +  +  +A     E    +A       +
Sbjct: 10  LIVSAMLVLALGGCTNIQPKSNPGDDAKNAL-ESGL-AQANAAHAEGKTDEAVSVLKAVA 67

Query: 85  RDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
             FP       R + L      + AG Y  A    +E + + P  K
Sbjct: 68  SRFPADKNPWIRIAQLR-----FDAGDYSDAIVNAQEALRRDPGDK 108


>gi|291613916|ref|YP_003524073.1| hypothetical protein Slit_1449 [Sideroxydans lithotrophicus ES-1]
 gi|291584028|gb|ADE11686.1| hypothetical protein Slit_1449 [Sideroxydans lithotrophicus ES-1]
          Length = 862

 Score = 43.6 bits (102), Expect = 0.027,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 25/74 (33%), Gaps = 1/74 (1%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           + E     L       A E FN+     P       + L     +   G   +A    + 
Sbjct: 304 LMENGGNALLTGQSFAAIESFNKVLTL-PPNTYTEDAQLWIGIAKERTGLLDKAILEYQS 362

Query: 120 YITQYPESKNVDYV 133
           Y+  YP+ K+  +V
Sbjct: 363 YLRLYPKGKSEAWV 376


>gi|158289256|ref|XP_311010.4| AGAP000136-PA [Anopheles gambiae str. PEST]
 gi|157018967|gb|EAA06388.4| AGAP000136-PA [Anopheles gambiae str. PEST]
          Length = 1341

 Score = 43.6 bits (102), Expect = 0.027,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 63/192 (32%), Gaps = 43/192 (22%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A  +L++ N +KA E   +     P      ++    A++     K + A S    +   
Sbjct: 683 ADFYLQQGNQTKAIELLKRMQ---PNQPYYVQAKTKMAYIYLHQRKDRLAFSQC--FREL 737

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
                +          S   M+ D     +     ++     + +  +      A     
Sbjct: 738 VANCPSA---------SSYLMLGDAYMSIQEPDDAIKAYREAIRQSPH-----DA----- 778

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL---ANYSDAEHAEEAMAR-LVEAYVA 239
                LA+K   +GR Y++  +Y  AI  +Q  +    NY         +   L E Y+ 
Sbjct: 779 ----LLASK---LGRAYVRTHQYQKAIAYYQEAILHPENYP--------LKLDLAELYLK 823

Query: 240 LALMDEAREVVS 251
           L     A + ++
Sbjct: 824 LKQYQNAEQTLA 835


>gi|20090223|ref|NP_616298.1| O-linked GlcNAc transferase [Methanosarcina acetivorans C2A]
 gi|19915215|gb|AAM04778.1| O-linked GlcNAc transferase [Methanosarcina acetivorans C2A]
          Length = 400

 Score = 43.6 bits (102), Expect = 0.027,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 66/201 (32%), Gaps = 35/201 (17%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
            Y    Y KA+   +  ++ +A E + +   +   +   +++           G+Y +A 
Sbjct: 153 DYPNAWYGKALNLSQAGSYEEAVEAYEKVLEE---SPDYKEAWAGKGIALGQMGRYDEAI 209

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
              ++ I   P        +Y  G+    +         + +  L+   + VE    +  
Sbjct: 210 IAYDKAIEIDPGFLE---AWYYKGVDLDSL--------GSHRQALKAYEKAVELDPEN-- 256

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRY-------------YLKRGEYVAAIPRFQLVLANYS 221
              A   + +    L   E  I  +             +  +G  ++ + RF+  +  Y 
Sbjct: 257 -DDAWNNMGIDLENLEKYEEAINAFDKAIAINSENSDVWYNKGFTLSQMHRFEEAVEAYR 315

Query: 222 D-AEHAEEAMARLVEAYVALA 241
              +   E +    EAY +L 
Sbjct: 316 KATQLDPEYL----EAYTSLG 332


>gi|88798070|ref|ZP_01113657.1| protein containing tetratricopeptide repeat [Reinekea sp. MED297]
 gi|88779267|gb|EAR10455.1| protein containing tetratricopeptide repeat [Reinekea sp. MED297]
          Length = 647

 Score = 43.6 bits (102), Expect = 0.027,   Method: Composition-based stats.
 Identities = 9/61 (14%), Positives = 24/61 (39%), Gaps = 4/61 (6%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y   ++ ++E  + +A   F +      F     ++ L      Y  G + +A    +
Sbjct: 263 DLY-TGLIQMQEGAYDEAIFSFERVLI---FEPNQHRARLELGRAYYLTGNFYRAREALQ 318

Query: 119 E 119
           +
Sbjct: 319 Q 319


>gi|195376509|ref|XP_002047039.1| GJ12147 [Drosophila virilis]
 gi|194154197|gb|EDW69381.1| GJ12147 [Drosophila virilis]
          Length = 1187

 Score = 43.6 bits (102), Expect = 0.027,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 53/141 (37%), Gaps = 24/141 (17%)

Query: 133 VYYLVGMSYAQM------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------R 179
            Y L+ +    +       RD   +++  +  L    +++     + +           +
Sbjct: 600 AYSLIALGNFSLQTLHQPSRDKEKERKHQEKALAIFKQVLRTDPRNIWATNGIGAVLAHK 659

Query: 180 FYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
             V   R+  A  +E         + I   Y+++ +Y++AI  ++  +  +    +  E 
Sbjct: 660 GCVIEARDIFAQVREATADFCDVWLNIAHVYVEQKQYISAIQMYENCMKKFYKHNNV-EV 718

Query: 230 MARLVEAYVALALMDEAREVV 250
           M  L  AY+    + EA+ V+
Sbjct: 719 MQYLARAYLRANKLVEAKAVL 739


>gi|167752253|ref|ZP_02424380.1| hypothetical protein ALIPUT_00496 [Alistipes putredinis DSM 17216]
 gi|167660494|gb|EDS04624.1| hypothetical protein ALIPUT_00496 [Alistipes putredinis DSM 17216]
          Length = 273

 Score = 43.6 bits (102), Expect = 0.027,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 31/100 (31%), Gaps = 8/100 (8%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQA 113
              Y       + + + +A +   + + D   +    +    +       Q+   KY +A
Sbjct: 61  EAAYNLGGALYRTEKYEEAAKMLERIAAD---STRTDQERAEAFYNLGNAQFKQEKYPEA 117

Query: 114 ASLGEEYITQYPESKNVDYVY-YLVGMSYAQMIRDVPYDQ 152
               +  +   P  +   Y Y Y   +   Q   D   DQ
Sbjct: 118 LESYKNSLRMNPADQEAKYNYAYTKRLLQKQQNEDQNKDQ 157


>gi|145535942|ref|XP_001453700.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124421430|emb|CAK86303.1| unnamed protein product [Paramecium tetraurelia]
          Length = 506

 Score = 43.6 bits (102), Expect = 0.027,   Method: Composition-based stats.
 Identities = 16/117 (13%), Positives = 41/117 (35%), Gaps = 12/117 (10%)

Query: 62  EKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+    + +  F +A   F+   +             + L   +  ++  +YQ+A +  +
Sbjct: 154 EQGRELIYKGKFMEALSIFDSSIKLFDQ----DY--DAYLGKGYALHNLNQYQEAIACYD 207

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
           + I+  P   N   VYY  G      +    +     +  ++   + +    N+ + 
Sbjct: 208 KAISINPNDGN---VYYNKGNILQSQLGFTLFTLNKYQEAIESYEKAISINPNNEHT 261


>gi|254304062|ref|ZP_04971420.1| hypothetical protein FNP_1732 [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148324254|gb|EDK89504.1| hypothetical protein FNP_1732 [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 425

 Score = 43.6 bits (102), Expect = 0.028,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 36/94 (38%), Gaps = 9/94 (9%)

Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE-------EAMARLVEAY 237
            +N  +  E     YY K  + + + PR    + N+  +   E       E    +  +Y
Sbjct: 334 VKNTTSKNETNGESYYDKAMKNLNSNPRV--AIENFKKSLSTEKIQDKKPEIYYNIASSY 391

Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
             L    E  + + L+++ +P   W +  E L K
Sbjct: 392 AKLGNKVEVTKYLRLLKQEFPNSEWVKRSEALTK 425


>gi|254414719|ref|ZP_05028484.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
 gi|196178567|gb|EDX73566.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
          Length = 942

 Score = 43.6 bits (102), Expect = 0.028,   Method: Composition-based stats.
 Identities = 19/140 (13%), Positives = 47/140 (33%), Gaps = 19/140 (13%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +    L    + +A   F +  +   F   + ++ L         G+Y++A +  ++ 
Sbjct: 52  YNRGTALLNIGEYEEAIASFEKALQ---FKPDSYEAWLNRGLALAKLGEYEEAITFFDKA 108

Query: 121 ITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           I   P+S    Y  +   G++ A++           +  +    + ++   +        
Sbjct: 109 IQIKPDS----YEAWLNRGLALAKL--------GEYEEAIASYDKAIQIKPD---KHETW 153

Query: 180 FYVTVGRNQLAAKEVEIGRY 199
               +  + L   E  I  Y
Sbjct: 154 HNWGLVLDDLGEYEEAIASY 173



 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 40/114 (35%), Gaps = 20/114 (17%)

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
            +  G+++QA +  ++ +   P+  N    +Y  G +   +           +  +    
Sbjct: 24  YFQLGQFEQAIASYDKALQIKPDDHN---AWYNRGTALLNI--------GEYEEAIASFE 72

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR-----GEYVAAIPR 212
           + ++   +S Y       + + +  L   E  I  ++ K        Y A + R
Sbjct: 73  KALQFKPDS-YEAWLNRGLALAK--LGEYEEAI-TFFDKAIQIKPDSYEAWLNR 122


>gi|149245874|ref|XP_001527407.1| serine/threonine-protein phosphatase T [Lodderomyces elongisporus
           NRRL YB-4239]
 gi|146449801|gb|EDK44057.1| serine/threonine-protein phosphatase T [Lodderomyces elongisporus
           NRRL YB-4239]
          Length = 533

 Score = 43.6 bits (102), Expect = 0.028,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 41/134 (30%), Gaps = 18/134 (13%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASL 116
           ++ ++   FLKE  F +A E + +     P      + ++ +           +  A   
Sbjct: 10  KLKDQGNKFLKEHKFDEAIEAYTKAIELDPKNAIFYSNRAQVRI-----KLENFGLAIQD 64

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            +  I   P        YY   +S   +++        TK   Q    I+ +  N     
Sbjct: 65  CDSAIAVDPNFIK---AYYRKAVSQMAILQ--------TKQAQQNFKFILTKLPNDKLTL 113

Query: 177 GARFYVTVGRNQLA 190
                 T    + A
Sbjct: 114 EHYKKCTALLKREA 127


>gi|312217038|emb|CBX96987.1| similar to serine/threonine-protein phosphatase 5 [Leptosphaeria
           maculans]
          Length = 481

 Score = 43.6 bits (102), Expect = 0.028,   Method: Composition-based stats.
 Identities = 21/164 (12%), Positives = 49/164 (29%), Gaps = 35/164 (21%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF---PFAGVARKSLLMSAFVQYSAG 108
           T       +  +     + Q + KA EY+ +    +   P +    ++            
Sbjct: 3   TPSEEATALKNQGNDAFRNQAWDKALEYYTKAIEAYNAEP-SFYCNRAQ-----TYIKLE 56

Query: 109 KYQQAASLGEEYITQYPES--KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
           +Y  A    +  I   P +   +    YY    +   +++         +  L+    +V
Sbjct: 57  QYGYAIQDADTAIELDPNNVKPHH-QAYYRRASANTAILKH--------REALRDWKLVV 107

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
           ++  N      A+  +                  +KR  ++ AI
Sbjct: 108 KKAPND---ATAKLRMVECEKV------------VKRDAFLKAI 136


>gi|291230109|ref|XP_002735012.1| PREDICTED: CG4525-like [Saccoglossus kowalevskii]
          Length = 532

 Score = 43.6 bits (102), Expect = 0.028,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 70/200 (35%), Gaps = 16/200 (8%)

Query: 65  VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
             FL  ++++ A                + ++ L  A+  +  G Y++A    E    + 
Sbjct: 31  EDFLSARDYTGAITLLEFTRSS---GKSSEETDLWIAYCAFHLGDYKRAMDEYERMTKKD 87

Query: 125 PESK----NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
                   NV   Y+ +GM Y +         + + L  + +  + +++ +   +     
Sbjct: 88  ACHPDVWCNVACCYFFLGM-YPEADAATQKGPK-SGLQNRLLFHVSQKFNDEKRLMSHHQ 145

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
            +          ++ +   +  R  Y  AI  ++ +L +  D          +   Y  L
Sbjct: 146 SLQDVI----EDQLSLASIHYLRSHYQEAIDIYKRILLDNRDYLALN---VYVALCYYKL 198

Query: 241 ALMDEAREVVSLIQERYPQG 260
              D ++EV+++  + YP  
Sbjct: 199 DYYDVSQEVLAVYLQNYPDS 218


>gi|304317603|ref|YP_003852748.1| glycosyl transferase family 2 [Thermoanaerobacterium
            thermosaccharolyticum DSM 571]
 gi|302779105|gb|ADL69664.1| glycosyl transferase family 2 [Thermoanaerobacterium
            thermosaccharolyticum DSM 571]
          Length = 1807

 Score = 43.6 bits (102), Expect = 0.028,   Method: Composition-based stats.
 Identities = 39/267 (14%), Positives = 96/267 (35%), Gaps = 46/267 (17%)

Query: 4    VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63
            +  +++ +      +L+++ +  + ++            ++  Y D           Y +
Sbjct: 1394 IATKSMNLNSYATPRLFRYLIMTYIALKEYDTALRIINDAKKYYEDIPDYK------YLE 1447

Query: 64   AVLFLKEQNFSKAYEYFN--QCSRDFPF--------AGVARKSLLMSAFVQYSAGKYQQA 113
              ++  ++ + KA E F       ++               ++  M        GK   A
Sbjct: 1448 GTIYFNQKRYEKALEIFKECALMGEYKGQFVTMGGTGSY--RAKYMIGQCYEKLGKLNDA 1505

Query: 114  ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
                 E + Q+P  ++V          + ++      +++  + + ++  + V       
Sbjct: 1506 VKEYMEILKQHPNYQDV----------FIKVFDMFVRNEKP-EDVYEFFRKHVNTKVPIN 1554

Query: 174  YVKGARFYVTVGRNQLAAKEVEI------------GRYYLKRGEYVAAIPRFQLVLANYS 221
            Y+  AR Y+ +GR  +A + ++             G  Y+   +Y  AI  F++    Y 
Sbjct: 1555 YIAIARLYINIGRYDIAKQYIDSIDIDLEGLNNLRGIIYMGLKDYENAIKHFEM---EYG 1611

Query: 222  DAEHAEEAMARLVEAYVALALMDEARE 248
              +  EEA  R    Y+ L  +D+A++
Sbjct: 1612 --KAKEEANYREALCYIILKDIDKAKD 1636


>gi|149278726|ref|ZP_01884861.1| TPR repeat [Pedobacter sp. BAL39]
 gi|149230345|gb|EDM35729.1| TPR repeat [Pedobacter sp. BAL39]
          Length = 208

 Score = 43.6 bits (102), Expect = 0.028,   Method: Composition-based stats.
 Identities = 22/144 (15%), Positives = 48/144 (33%), Gaps = 22/144 (15%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
            +  + + ++  A     + +     +      L M  +  Y  G ++++     + IT 
Sbjct: 30  GMQAMMKGDYKAAVGQLEKANTK---SPNNANVLKMLGYSYYQCGNFERSIETYSQLITV 86

Query: 124 YPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKL-----MLQYMSRIVERYTNSPYVKG 177
            P     DY  YY  G +   +  D        +       ++  ++ +E          
Sbjct: 87  KPS----DYSAYYYRGKARQNVANDPKESLNQMRENFYLSAIKDFTKAIEL--------N 134

Query: 178 ARFYVTVGRNQ-LAAKEVEIGRYY 200
                 + +N+ LA K+  I R Y
Sbjct: 135 GEEDTQLLQNRALAYKDYAIYRSY 158


>gi|118347681|ref|XP_001007317.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89289084|gb|EAR87072.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 589

 Score = 43.6 bits (102), Expect = 0.028,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 44/116 (37%), Gaps = 23/116 (19%)

Query: 61  YEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           YEK  +++  ++NF +A +YF       P            A    +  + Q A    E 
Sbjct: 98  YEKLGLIYFDQKNFQQAIKYFKMGVNINPNYQYM---QYNLAIAYKNNKQIQLAIKHFE- 153

Query: 120 YITQYPESKNVD----YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
                  S  +D    Y YY +G+ Y+        DQ+     ++Y  + ++ Y N
Sbjct: 154 ------VSLEIDEQNRYAYYNLGLIYS--------DQKLIDNAIKYFQQAIKIYPN 195


>gi|310825327|ref|YP_003957685.1| hypothetical protein STAUR_8103 [Stigmatella aurantiaca DW4/3-1]
 gi|309398399|gb|ADO75858.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 308

 Score = 43.6 bits (102), Expect = 0.029,   Method: Composition-based stats.
 Identities = 23/181 (12%), Positives = 55/181 (30%), Gaps = 31/181 (17%)

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +Y++A  L            +      L   +          +QR  K  +     ++ +
Sbjct: 43  EYRKAVDLLRR--------DDTPQSLVLRARALKGAADVYWLEQRKVKEAVSVYKELLVQ 94

Query: 169 YTNSPYVKGARFYVTVG-----------RNQL-----------AAKEVEIGRYYLKRGEY 206
              SP    AR  +               +QL           A    ++ + Y +  +Y
Sbjct: 95  CPESPEALEARIILAELLRVHYNDLRGAIDQLTAALQRNPPQGAELHYQVAKLYFELADY 154

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL-ALMDEAREVVSLIQERYPQGYWARY 265
                    +   ++ + + ++A+    +A   +     EA    + ++ R+P    A +
Sbjct: 155 AQCELEATRLAERFATSAYVDDALFLRAQAIQMMEGRRQEASRAYADLRTRFPDSELAAH 214

Query: 266 V 266
            
Sbjct: 215 A 215



 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/128 (13%), Positives = 37/128 (28%), Gaps = 13/128 (10%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEEYITQYPESK 128
            +   A +      +  P     + + L    A + +    Y Q          ++  S 
Sbjct: 117 NDLRGAIDQLTAALQRNP----PQGAELHYQVAKLYFELADYAQCELEATRLAERFATSA 172

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
            VD   +L   +   M       +   +   +  + +  R+ +S     A   +   R +
Sbjct: 173 YVDDALFLRAQAIQMM-------EGRRQEASRAYADLRTRFPDSELAAHATVEMGRLRAE 225

Query: 189 LAAKEVEI 196
               E  I
Sbjct: 226 AGENEKAI 233


>gi|162454790|ref|YP_001617157.1| hypothetical protein sce6508 [Sorangium cellulosum 'So ce 56']
 gi|161165372|emb|CAN96677.1| putative membrane protein [Sorangium cellulosum 'So ce 56']
          Length = 282

 Score = 43.6 bits (102), Expect = 0.029,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 28/93 (30%), Gaps = 13/93 (13%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD---FPFAGVARKSLLMSAFVQY-- 105
                    ++++    L    +  A + F   +      P A   R      A+V    
Sbjct: 34  AQPAEPPEALFQEGTAALGRGEYGAAIDTFELLADRGFVHPDASYNR----GLAYVTRVR 89

Query: 106 ----SAGKYQQAASLGEEYITQYPESKNVDYVY 134
                 G   +AA+  EE +   P   + D+  
Sbjct: 90  EGADRPGDLGRAAAAFEEALRLRPGDADADHAL 122


>gi|295132202|ref|YP_003582878.1| aerotolerance-related protein BatE [Zunongwangia profunda SM-A87]
 gi|294980217|gb|ADF50682.1| aerotolerance-related protein BatE [Zunongwangia profunda SM-A87]
          Length = 249

 Score = 43.6 bits (102), Expect = 0.029,   Method: Composition-based stats.
 Identities = 10/74 (13%), Positives = 21/74 (28%), Gaps = 3/74 (4%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
              ++E+A     + N+  A + +            A       A   Y       +   
Sbjct: 20  NEALFEQANKAYADGNYEDAIKKYESILDK---GETAVSLYYNLANAHYKLNHIAPSIYY 76

Query: 117 GEEYITQYPESKNV 130
            E+ +   P   +V
Sbjct: 77  YEKALQLAPNDADV 90


>gi|296234171|ref|XP_002762302.1| PREDICTED: serine/threonine-protein phosphatase 5 isoform 1
           [Callithrix jacchus]
          Length = 499

 Score = 43.6 bits (102), Expect = 0.029,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 55/173 (31%), Gaps = 33/173 (19%)

Query: 32  VCFLVGWERQSSRDVYLDSVTD--VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
           +    G   + +     +  TD  ++   E+  +A  + K +++  A ++++Q     P 
Sbjct: 1   MAMAEGERTECAEPPRDEPPTDGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS 60

Query: 90  AG--VARKSLLMSAF----VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
                  +S    A+       Y+ G   +A  L ++YI            YY    S  
Sbjct: 61  NAIYYGNRS---LAYLRTECYGYALGDATRAIELDKKYIK----------GYYRRAASNM 107

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
            +           +  L+    +V+   +      A+         +  K  E
Sbjct: 108 AL--------GKFRAALRDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 149


>gi|261211898|ref|ZP_05926185.1| TPR repeat-containing protein [Vibrio sp. RC341]
 gi|260839248|gb|EEX65880.1| TPR repeat-containing protein [Vibrio sp. RC341]
          Length = 257

 Score = 43.6 bits (102), Expect = 0.029,   Method: Composition-based stats.
 Identities = 20/144 (13%), Positives = 55/144 (38%), Gaps = 16/144 (11%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
             S D    + +    ++  Y+ AV   LK+++++ A   F +   D+P +  +  +   
Sbjct: 123 SGSDDAAQGTFSSDANEQAAYQNAVDLILKKRDYAGAIAAFQKFQTDYPNSTFSANASYW 182

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPE---SKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
              + ++    ++A    + +I    +   +K  D       +     + D+       +
Sbjct: 183 LGQLYFAKKDDKEA---AKSFIAVVSQKDSNKRAD------ALV---KLGDIAKRNNNAE 230

Query: 157 LMLQYMSRIVERYTNSPYVKGARF 180
              ++  + ++ Y +S   K A+ 
Sbjct: 231 QARKFYQQAIDEYPDSASAKIAKE 254



 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 46/130 (35%), Gaps = 15/130 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            Q   D+   +R     +    +    Y NS +   A +++              G+ Y 
Sbjct: 143 YQNAVDLILKKRDYAGAIAAFQKFQTDYPNSTFSANASYWL--------------GQLYF 188

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + +   A   F  V++   D+    +A+ +L +        ++AR+      + YP   
Sbjct: 189 AKKDDKEAAKSFIAVVSQ-KDSNKRADALVKLGDIAKRNNNAEQARKFYQQAIDEYPDSA 247

Query: 262 WARYVETLVK 271
            A+  +  +K
Sbjct: 248 SAKIAKESLK 257


>gi|195170683|ref|XP_002026141.1| GL16176 [Drosophila persimilis]
 gi|194111021|gb|EDW33064.1| GL16176 [Drosophila persimilis]
          Length = 1180

 Score = 43.6 bits (102), Expect = 0.029,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 53/141 (37%), Gaps = 24/141 (17%)

Query: 133 VYYLVGMSYAQM------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------R 179
            Y L+ +    +       RD   +++  +  L    +++     + +           +
Sbjct: 601 AYSLIALGNFSLQTLHQPSRDKEKERKHQEKALAIFKQVLRNDPRNIWATNGIGAVLAHK 660

Query: 180 FYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
             V   R+  A  +E         + I   Y+++ +Y++AI  ++  +  +    +  E 
Sbjct: 661 GCVIEARDIFAQVREATADFSDVWLNIAHVYVEQKQYISAIQMYENCMKKFYKHNNV-EV 719

Query: 230 MARLVEAYVALALMDEAREVV 250
           M  L  AY+    + EA+ V+
Sbjct: 720 MQYLARAYLRANKLVEAKAVL 740


>gi|255645435|gb|ACU23213.1| unknown [Glycine max]
          Length = 342

 Score = 43.6 bits (102), Expect = 0.029,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 34/110 (30%), Gaps = 16/110 (14%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           + +   K   + +A E F       P    A  +    A   +   + Q A S  EE   
Sbjct: 230 EGLQLYKNGKYDEALEKFESILGSKPEPEEAAVASYNVACCYFKLNQTQAALSSLEE--A 287

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
                ++             + IR  P D    +   +    +++R+  S
Sbjct: 288 LNTGFED------------FKRIRTDP-DLANAR-ASEEFDPLLKRFDES 323


>gi|212640349|ref|YP_002316869.1| TPR -repeat containing protein [Anoxybacillus flavithermus WK1]
 gi|212561829|gb|ACJ34884.1| TPR-repeat-containing protein [Anoxybacillus flavithermus WK1]
          Length = 496

 Score = 43.6 bits (102), Expect = 0.029,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 40/111 (36%), Gaps = 14/111 (12%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           E+A   L++  F +A   F +  ++ P    A  +    A   +  G   +A    E  +
Sbjct: 167 EQARTLLEKGEFQEAITLFEEMIKEHP-ENWA--AYNNLALAYFYQGNVGKAKQTIEYIL 223

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
            Q P +        L  +    +      +Q    L++Q + R+   Y  S
Sbjct: 224 EQNPGN--------LHALCNDAVFSYYLQEQERLFLLIQSLQRV---YPIS 263


>gi|328788255|ref|XP_624242.2| PREDICTED: serine/threonine-protein phosphatase 5 [Apis mellifera]
          Length = 793

 Score = 43.6 bits (102), Expect = 0.030,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 49/155 (31%), Gaps = 25/155 (16%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKS 96
             +++    + S  D     +  E+A  + K Q+++KA E + +     P        +S
Sbjct: 1   MSENAEITGVISPEDAARAEKFKEEANEYFKNQDYTKAIELYTKAIELNPTVAVYYGNRS 60

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRA 154
                F       +  A +   + I       + +YV  YY    ++  +          
Sbjct: 61  -----FAYLKTEFFGYALTDASKAIEL-----DKNYVKGYYRRAAAHMSL--------GK 102

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
            KL L+    + +   N      A    T     L
Sbjct: 103 FKLALKDYKTVTKARPNDK---DAMIKYTECCKTL 134


>gi|209695367|ref|YP_002263296.1| hypothetical protein VSAL_I1900 [Aliivibrio salmonicida LFI1238]
 gi|208009319|emb|CAQ79585.1| putative exported protein [Aliivibrio salmonicida LFI1238]
          Length = 254

 Score = 43.6 bits (102), Expect = 0.030,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 42/124 (33%), Gaps = 24/124 (19%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               Y  A    +E++  YP+S      +Y +G  Y     DV           +  +++
Sbjct: 148 KKKDYAGATKAFQEFVAAYPDSVYSSNAHYWLGQLYFAQKNDV--------EAAKSFTKV 199

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           V  Y +S     A   +                   KR    AA   +Q V+  YSD+  
Sbjct: 200 VS-YADSNKRADALLKLGEL---------------AKRNNKAAAQKYYQKVITEYSDSTT 243

Query: 226 AEEA 229
           A+ A
Sbjct: 244 AQTA 247


>gi|47224137|emb|CAG13057.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 303

 Score = 43.6 bits (102), Expect = 0.030,   Method: Composition-based stats.
 Identities = 15/141 (10%), Positives = 44/141 (31%), Gaps = 28/141 (19%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRD--FPFAGVARK-----------SLLMSAFVQYSAG 108
           +K   + K+  + +A   + +         +G+A +           + L  A       
Sbjct: 145 DKGTQYFKDGKYKQASVQYKKIVSWLEHE-SGLAEEDEKKAKALRLAAHLNLAMCFLKVK 203

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +  QA    ++ +     ++      +  G ++  M                   ++V+ 
Sbjct: 204 ELTQALENCDKALELDQSNEK---ALFRRGEAFFNM--------NEFDKAKNDFQQVVQL 252

Query: 169 YTNSPYVKGARFYVTVGRNQL 189
           Y  +     A+  V + + ++
Sbjct: 253 YPTNK---AAKSQVALCQTRI 270



 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 2/91 (2%)

Query: 11  IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLK 69
           + E    +     L    ++A+CFL   E   + +    ++  D   ++ ++ +   F  
Sbjct: 176 LAEEDEKKAKALRLAAHLNLAMCFLKVKELTQALENCDKALELDQSNEKALFRRGEAFFN 235

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
              F KA   F Q  + +P    A KS +  
Sbjct: 236 MNEFDKAKNDFQQVVQLYPTNK-AAKSQVAL 265


>gi|113474349|ref|YP_720410.1| hypothetical protein Tery_0481 [Trichodesmium erythraeum IMS101]
 gi|110165397|gb|ABG49937.1| TPR repeat [Trichodesmium erythraeum IMS101]
          Length = 3145

 Score = 43.6 bits (102), Expect = 0.030,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 45/137 (32%), Gaps = 18/137 (13%)

Query: 68   LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
            L++     A   + +  +  P +       +   FV    G   +A +  ++ I  +P  
Sbjct: 1757 LQKGQIDLAIINYKKSRKINPNSSW---ININLGFVWEKNGNLPKANTYYQKAIEIHPNH 1813

Query: 128  KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
                             + ++   Q   +L ++Y  + +E   +      +  Y+     
Sbjct: 1814 AEA-----------WCRLGNILQKQGQFELAIEYCQKSLELNPDYIEANHSLGYIFFQLG 1862

Query: 188  QLAA----KEVEIGRYY 200
            +LA      E  I +YY
Sbjct: 1863 KLAESQKYYEQAIKKYY 1879



 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 38/111 (34%), Gaps = 18/111 (16%)

Query: 64   AVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            AVL         A +  NQ    +P F    +  + LM        G+ ++A +  ++ I
Sbjct: 1034 AVLENLAGRNDIAIQLLNQVINLYPGFTEAYSNLAKLMK-----KEGRLEEAIAHYQKAI 1088

Query: 122  TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
            +  P +            S    +  +  ++   +  +    + +E   N+
Sbjct: 1089 SLEPNNS-----------SNYSNLGFIFLEKGQIESAIINSEKSIEINPNN 1128



 Score = 36.6 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 63/213 (29%), Gaps = 38/213 (17%)

Query: 64   AVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            AVL         A +  NQ     P F    +  + LM        G+ ++A +  ++ I
Sbjct: 1685 AVLENLAGRNDIAIQLLNQVINLNPGFTKAYSNLAKLMK-----KEGRLEEAIAHYQKAI 1739

Query: 122  TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV------ 175
               P +            S    +  +   +    L +    +  +   NS ++      
Sbjct: 1740 ELEPNNS-----------SNYSSLGWIFLQKGQIDLAIINYKKSRKINPNSSWININLGF 1788

Query: 176  --------KGAR---FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
                      A              A     +G    K+G++  AI   Q  L    D  
Sbjct: 1789 VWEKNGNLPKANTYYQKAIEIHPNHAEAWCRLGNILQKQGQFELAIEYCQKSLELNPD-- 1846

Query: 225  HAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
               EA   L   +  L  + E+++      ++Y
Sbjct: 1847 -YIEANHSLGYIFFQLGKLAESQKYYEQAIKKY 1878



 Score = 35.1 bits (80), Expect = 9.9,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 57/171 (33%), Gaps = 36/171 (21%)

Query: 61   YEKA-----VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
            Y +A     V+ LK+     A EYF +     P    A ++     FV    G   +A++
Sbjct: 1196 YAEAWCNLGVILLKQGQIELAIEYFRKSLELNP--DYA-QAYNNLGFVFQEKGNLSKASN 1252

Query: 116  LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
              ++ +   P      Y            +  V   Q   +L ++Y  + +E   +  Y 
Sbjct: 1253 YYQQALEINPN-----YAE---AWCN---LGVVLRKQGQIELAIEYFRKSLELNPD--YA 1299

Query: 176  KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
                    +  N L       G  + + G + A+I  +Q  L    +    
Sbjct: 1300 --------MTHNSL-------GVTFEEEGNFTASIASYQKALELEPNFPEV 1335


>gi|166363102|ref|YP_001655375.1| TPR repeat-containing protein [Microcystis aeruginosa NIES-843]
 gi|166085475|dbj|BAG00183.1| tetratricopeptide repeat protein [Microcystis aeruginosa NIES-843]
          Length = 1179

 Score = 43.6 bits (102), Expect = 0.030,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 48/143 (33%), Gaps = 17/143 (11%)

Query: 57   QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             +  Y +  L+  +Q +  A   +++     P    A K+      +  +  KY+ A S 
Sbjct: 958  AKVYYNRGNLYYNQQKYDLALSDYSKAIEINP--NYA-KAYYNRGNLYKNLQKYELALSD 1014

Query: 117  GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
              + I   P        YY  G+ Y          Q+   L L   S+ ++   N     
Sbjct: 1015 YSKAIDINP---KFAEAYYNRGLLYYN--------QQKYDLALSDFSKAIDINPND---A 1060

Query: 177  GARFYVTVGRNQLAAKEVEIGRY 199
            GA        + L   E+ +  Y
Sbjct: 1061 GAYNNRGNLYSDLQKYELALSDY 1083



 Score = 42.8 bits (100), Expect = 0.048,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 18/121 (14%)

Query: 53   DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKY 110
            + ++    Y + +L+  +Q +  A   F++     P        +  L          KY
Sbjct: 1022 NPKFAEAYYNRGLLYYNQQKYDLALSDFSKAIDINPNDAGAYNNRGNL-----YSDLQKY 1076

Query: 111  QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
            + A S   + I   P   N    YY  G+ Y          Q+   L L   S+ ++   
Sbjct: 1077 ELALSDYSKAIDINPNYAN---AYYNRGLLYYN--------QQKYDLALSDFSKAIDINP 1125

Query: 171  N 171
            N
Sbjct: 1126 N 1126


>gi|167034191|ref|YP_001669422.1| cellulose synthase subunit BcsC [Pseudomonas putida GB-1]
 gi|166860679|gb|ABY99086.1| cellulose synthase operon C domain protein [Pseudomonas putida
           GB-1]
          Length = 1186

 Score = 43.6 bits (102), Expect = 0.030,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 67/204 (32%), Gaps = 22/204 (10%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
                A     +  + +P +   R++L    F +    +   A +L ++ +++ P +++ 
Sbjct: 161 GQRPGAIRQLQRLDQQYPGSAGLRQTLAGWLFAEKRDRE---ALALLDQ-LSRDPGARDA 216

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
                      AQ   D    Q  +          V+RY  SP +  A   +   R  LA
Sbjct: 217 A----------AQREFDYLAGQAVSASSAVAWQAFVQRYPASPLLAQASENLQQQRKLLA 266

Query: 191 AKEVEI---GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA---YVALALMD 244
               +    G+  L +G +  A  + +  L  Y D      A+   + +   Y       
Sbjct: 267 DPAWQAGQRGKALLDKGRHAEAEAQLRRALRQYPDDASLHGALGYALMSQKRYDQANASF 326

Query: 245 EAREVVSLIQERYPQGYWARYVET 268
            A       Q+ Y    W+  V  
Sbjct: 327 RAATDKE--QDSYKISKWSDMVSA 348


>gi|108759667|ref|YP_634061.1| TPR domain-containing protein [Myxococcus xanthus DK 1622]
 gi|108463547|gb|ABF88732.1| TPR domain protein [Myxococcus xanthus DK 1622]
          Length = 446

 Score = 43.6 bits (102), Expect = 0.030,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 24/90 (26%), Gaps = 7/90 (7%)

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
           +M A   Y +    +A    +  +   P  +      Y       +   D   D  A K 
Sbjct: 196 VMQANALYLSNDSGKALVAYDAVLEVEPLHEE---ALYARAALLFETKGD---DVAALKK 249

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
             +    +   Y +S     A   +     
Sbjct: 250 AGEGFEAVATTYPDSFRAPMA-KRMVALVE 278


>gi|254465798|ref|ZP_05079209.1| TPR domain protein [Rhodobacterales bacterium Y4I]
 gi|206686706|gb|EDZ47188.1| TPR domain protein [Rhodobacterales bacterium Y4I]
          Length = 188

 Score = 43.6 bits (102), Expect = 0.030,   Method: Composition-based stats.
 Identities = 17/125 (13%), Positives = 40/125 (32%), Gaps = 14/125 (11%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +  +    ++  +  +A E+    +   P    A +     A V ++ G Y  + +  E 
Sbjct: 71  LLRRGTDAIERGDLQQAAEHLTALTDHAP--EFA-RGWYQRARVYFAMGLYGPSVADLER 127

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +   P+  +  Y     G +  +  R+            Q   R    + +   V  A 
Sbjct: 128 ALALNPQDYDAIYAL---G-ALFEQFREPSR-------AYQAYQRAKAIHPHHEEVSSAL 176

Query: 180 FYVTV 184
             + +
Sbjct: 177 ERLKL 181


>gi|119496609|ref|XP_001265078.1| DnaJ domain protein [Neosartorya fischeri NRRL 181]
 gi|119413240|gb|EAW23181.1| DnaJ domain protein [Neosartorya fischeri NRRL 181]
          Length = 688

 Score = 43.6 bits (102), Expect = 0.030,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 68/208 (32%), Gaps = 21/208 (10%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
               F K+ N+++A E F +     P + +    L   A    SA +Y +A    E  + 
Sbjct: 203 AGNKFFKDGNYNRAIEEFTKAIEINPSSSI---YLSNRAAAYLSANRYLEALEDAERALE 259

Query: 123 QYPESKNVDY--VYYLVGMSY-AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
             P++  + Y     L  +   ++ +  +   Q       +     ++R+        A 
Sbjct: 260 LDPDNSKIMYRLARILTALGRPSEALEVLSRVQPPASATDRAAPEKMQRFIKQAEETLAE 319

Query: 180 FY--------VTVGRNQLAA--KE-----VEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
                     +   R  L    KE     +      LK G   +      + ++   +  
Sbjct: 320 DRGVSMVLFCIEQARQLLGRGVKEPRKWTLLTAEAQLKMGNENSLRKAQDIAISMLRENN 379

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSL 252
              +A+     AY  L   ++A + + +
Sbjct: 380 QDPDALMIRARAYYGLGESEQALKTLKM 407


>gi|332883201|gb|EGK03484.1| hypothetical protein HMPREF9456_01551 [Dysgonomonas mossii DSM
           22836]
          Length = 383

 Score = 43.6 bits (102), Expect = 0.030,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 70/221 (31%), Gaps = 30/221 (13%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
            +SR + L      +  R  Y K ++     +   A   F +     P    A  + +  
Sbjct: 79  NASRYIDLSVQKSAKCARAYYVKGLVQNANGSADDAKGSFEKAIAISP--NFA-DAYVGL 135

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
             V  +     +A    ++  +  P S+     +Y++G+ YA                L 
Sbjct: 136 GDVFLAKEDTDKALENYKKATSFNPPSEK---AFYMIGVIYASRDDLSD--------ALN 184

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
                            A+  +   +  L      I R     G Y  A   ++ ++   
Sbjct: 185 VFYT-------------AKDKIEKDKELLVTVLYNIARIEYDFGRYTKAAEAYEELVGYL 231

Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            D  ++ E   +LV  YV L   ++A    + +   Y +G 
Sbjct: 232 PDDYYSYE---KLVHCYVKLGEYNKAATSKTKLYNAYKEGQ 269


>gi|242281032|ref|YP_002993161.1| N-acetylmuramoyl-L-alanine amidase [Desulfovibrio salexigens DSM
           2638]
 gi|242123926|gb|ACS81622.1| N-acetylmuramoyl-L-alanine amidase [Desulfovibrio salexigens DSM
           2638]
          Length = 587

 Score = 43.6 bits (102), Expect = 0.030,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 44/176 (25%), Gaps = 15/176 (8%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLK-EQNFS 74
             + +   L +   +A   +      +      D  T    Q     K     K    + 
Sbjct: 1   MRKFFIPNLIMALFLAGLLVSVIPASAFGASIKDDFTIAWKQFHALSKNQKKAKYRSEWE 60

Query: 75  KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPES 127
           K  + F    +       A KSL          G        ++ A       I+ +P  
Sbjct: 61  KVGKKFRNVFKRSTRGQYAPKSLYYLGRTYEELGNRSGIKKDFRTAVDYYGRMISNFPSH 120

Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
           +  D   Y       + + +                 IV RY  S     AR  + 
Sbjct: 121 QWTDDSIYRRAEIRLRKLHEKDL-------AYSDYLTIVHRYAKSDMYSQARKRLD 169



 Score = 35.9 bits (82), Expect = 6.7,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 25/77 (32%), Gaps = 10/77 (12%)

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA-------LMDEAREV 249
            +Y   R E+     +F+ V    +  ++A +++  L   Y  L            A + 
Sbjct: 53  AKY---RSEWEKVGKKFRNVFKRSTRGQYAPKSLYYLGRTYEELGNRSGIKKDFRTAVDY 109

Query: 250 VSLIQERYPQGYWARYV 266
              +   +P   W    
Sbjct: 110 YGRMISNFPSHQWTDDS 126


>gi|118581737|ref|YP_902987.1| hypothetical protein Ppro_3337 [Pelobacter propionicus DSM 2379]
 gi|118504447|gb|ABL00930.1| Tetratricopeptide TPR_2 repeat protein [Pelobacter propionicus DSM
           2379]
          Length = 361

 Score = 43.6 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 54/161 (33%), Gaps = 23/161 (14%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
           S++    +        E+Y +A   L  ++  +A     Q     P   +A         
Sbjct: 201 SQETTDVARQPSLAADELYRRAQEQLSARDDDQALLTLEQLVTQEPDNALAHN---DLGV 257

Query: 103 VQYSAGKYQQAASLGEEYITQYPES----KNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
           +    G  +QA    E  +   P +    KN+    Y     Y+ + R        T   
Sbjct: 258 LHTRRGDLEQALLHHETAVRNNPANTTFQKNLA-ALY-----YSCLGR--------TDEA 303

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE-VEIGR 198
           +   +R++  Y +   V  A   +    N+L  +  + IGR
Sbjct: 304 ITIYTRLLREYPDDVEVLTALA-IISAANRLGEQARLFIGR 343


>gi|297380454|gb|ADI35341.1| paralysed flagella protein [Helicobacter pylori v225d]
          Length = 789

 Score = 43.6 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 50/137 (36%), Gaps = 9/137 (6%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             +T   Y    Y +A   +  Q +  A    ++  +++P     +   L+        G
Sbjct: 174 PLLTTKGYDLNAYLEAKKQINSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIALGQLG 233

Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            K      +G ++I  YP   ++  V Y V  +  +            K  ++Y  RI+ 
Sbjct: 234 IKKSLLIDIGTKWIKNYPTDPSIPEVLYYVAKALDEN--------NNYKQAMRYYKRILL 285

Query: 168 RYTNSPYVKGARFYVTV 184
            Y NS Y   A+  + +
Sbjct: 286 EYKNSRYAPLAQMRLAI 302



 Score = 42.4 bits (99), Expect = 0.060,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 31/99 (31%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
             + RA   +    ++   + L I     +                +  TD      +Y 
Sbjct: 203 RTISRAFKNYPQTIFKKDLYLLEIIALGQLGIKKSLLIDIGTKWIKNYPTDPSIPEVLYY 262

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
            A    +  N+ +A  Y+ +   ++  +  A  + +  A
Sbjct: 263 VAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRLA 301


>gi|294678315|ref|YP_003578930.1| hypothetical protein [Rhodobacter capsulatus SB 1003]
 gi|294477135|gb|ADE86523.1| TPR repeat domain protein [Rhodobacter capsulatus SB 1003]
          Length = 186

 Score = 43.6 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 21/159 (13%), Positives = 42/159 (26%), Gaps = 18/159 (11%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
           F  +A     GW+   S      S +       + ++    +   +   A E+    +  
Sbjct: 36  FSELADPGYAGWQSAESDIRRAWSRSGSSTMDLLLKRGEEAMDAGDLPAAIEHLTALTDH 95

Query: 87  FP-FAG-VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
            P F      ++        Y AG+   A +   + +   P          L G+     
Sbjct: 96  APDFPEGWNARAT-----AYYMAGQLGPAMADIAQVLRLEPRHWGA-----LAGLGM--- 142

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
              +  D       L           +   VK +   + 
Sbjct: 143 ---IFADMGDRARALSAFRASFALNPHQQDVKDSITRLE 178


>gi|262167806|ref|ZP_06035507.1| TPR domain protein in aerotolerance operon [Vibrio cholerae RC27]
 gi|262023714|gb|EEY42414.1| TPR domain protein in aerotolerance operon [Vibrio cholerae RC27]
          Length = 622

 Score = 43.6 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 42/115 (36%), Gaps = 10/115 (8%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
           F+L + F +++     W    S  +  D      +  E Y +A    ++  +  A  Y+ 
Sbjct: 323 FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMHMFNNEQYAQAAEAFRDPRWQGAARYYA 379

Query: 82  QCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           +          ++ +          A     AG+ Q+A  L E+ + Q P  ++ 
Sbjct: 380 K-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLYEQVLKQEPNHQDA 433


>gi|229506664|ref|ZP_04396173.1| TPR domain protein in aerotolerance operon [Vibrio cholerae BX
           330286]
 gi|229357015|gb|EEO21933.1| TPR domain protein in aerotolerance operon [Vibrio cholerae BX
           330286]
          Length = 636

 Score = 43.6 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 42/115 (36%), Gaps = 10/115 (8%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
           F+L + F +++     W    S  +  D      +  E Y +A    ++  +  A  Y+ 
Sbjct: 323 FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMHMFNNEQYAQAAEAFRDPRWQGAARYYA 379

Query: 82  QCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           +          ++ +          A     AG+ Q+A  L E+ + Q P  ++ 
Sbjct: 380 K-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLYEQVLKQEPNHQDA 433


>gi|227811795|ref|YP_002811805.1| hypothetical protein VCM66_A0167 [Vibrio cholerae M66-2]
 gi|227010937|gb|ACP07148.1| conserved hypothetical protein [Vibrio cholerae M66-2]
          Length = 628

 Score = 43.6 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 42/115 (36%), Gaps = 10/115 (8%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
           F+L + F +++     W    S  +  D      +  E Y +A    ++  +  A  Y+ 
Sbjct: 323 FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMHMFNNEQYAQAAEAFRDPRWQGAARYYA 379

Query: 82  QCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           +          ++ +          A     AG+ Q+A  L E+ + Q P  ++ 
Sbjct: 380 K-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLYEQVLKQEPNHQDA 433


>gi|298500026|ref|ZP_07009832.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|297542007|gb|EFH78058.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
          Length = 626

 Score = 43.6 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 42/115 (36%), Gaps = 10/115 (8%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
           F+L + F +++     W    S  +  D      +  E Y +A    ++  +  A  Y+ 
Sbjct: 323 FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMHMFNNEQYAQAAEAFRDPRWQGAARYYA 379

Query: 82  QCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           +          ++ +          A     AG+ Q+A  L E+ + Q P  ++ 
Sbjct: 380 K-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLYEQVLKQEPNHQDA 433


>gi|153816861|ref|ZP_01969528.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|126512664|gb|EAZ75258.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
          Length = 630

 Score = 43.6 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 42/115 (36%), Gaps = 10/115 (8%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
           F+L + F +++     W    S  +  D      +  E Y +A    ++  +  A  Y+ 
Sbjct: 323 FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMHMFNNEQYAQAAEAFRDPRWQGAARYYA 379

Query: 82  QCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           +          ++ +          A     AG+ Q+A  L E+ + Q P  ++ 
Sbjct: 380 K-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLYEQVLKQEPNHQDA 433


>gi|121586717|ref|ZP_01676500.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121549014|gb|EAX59051.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
          Length = 642

 Score = 43.6 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 42/115 (36%), Gaps = 10/115 (8%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
           F+L + F +++     W    S  +  D      +  E Y +A    ++  +  A  Y+ 
Sbjct: 323 FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMHMFNNEQYAQAAEAFRDPRWQGAARYYA 379

Query: 82  QCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           +          ++ +          A     AG+ Q+A  L E+ + Q P  ++ 
Sbjct: 380 K-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLYEQVLKQEPNHQDA 433


>gi|147671681|ref|YP_001215943.1| hypothetical protein VC0395_1107 [Vibrio cholerae O395]
 gi|146314064|gb|ABQ18604.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|227014796|gb|ACP11005.1| conserved hypothetical protein [Vibrio cholerae O395]
          Length = 646

 Score = 43.6 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 42/115 (36%), Gaps = 10/115 (8%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
           F+L + F +++     W    S  +  D      +  E Y +A    ++  +  A  Y+ 
Sbjct: 323 FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMHMFNNEQYAQAAEAFRDPRWQGAARYYA 379

Query: 82  QCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           +          ++ +          A     AG+ Q+A  L E+ + Q P  ++ 
Sbjct: 380 K-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLYEQVLKQEPNHQDA 433


>gi|121728215|ref|ZP_01681249.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|121629538|gb|EAX61962.1| conserved hypothetical protein [Vibrio cholerae V52]
          Length = 652

 Score = 43.6 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 42/115 (36%), Gaps = 10/115 (8%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
           F+L + F +++     W    S  +  D      +  E Y +A    ++  +  A  Y+ 
Sbjct: 323 FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMHMFNNEQYAQAAEAFRDPRWQGAARYYA 379

Query: 82  QCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           +          ++ +          A     AG+ Q+A  L E+ + Q P  ++ 
Sbjct: 380 K-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLYEQVLKQEPNHQDA 433


>gi|323698623|ref|ZP_08110535.1| PEP-CTERM system TPR-repeat lipoprotein [Desulfovibrio sp. ND132]
 gi|323458555|gb|EGB14420.1| PEP-CTERM system TPR-repeat lipoprotein [Desulfovibrio
           desulfuricans ND132]
          Length = 884

 Score = 43.6 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 42/225 (18%), Positives = 72/225 (32%), Gaps = 36/225 (16%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           E+   +  + N+S A   +     + P      K+ L  A    + GK  QA    E+Y 
Sbjct: 29  EEGEQYRNDGNYSGAIVIYKTILDEHPNE---LKARLGLAKSYLATGKLDQARKNFEKYQ 85

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK----- 176
            Q P  K + Y            +  +    +     L+Y +   + Y  S         
Sbjct: 86  LQNPYDKELGY-----------DLARLERLSQNKPKALEYAAAYCKDYPESVEGALLFGH 134

Query: 177 ---------GARFYVTVGRNQLA----AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
                     A  + +    QLA       + + + Y  RG   AA      VLA     
Sbjct: 135 LLLEGGNDVQAEEWFSKAL-QLAPENTEARIGLAQVYKSRGRKDAADKAIAEVLAKDPT- 192

Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
               EA+       +        R+  + I + YP   +A+Y++ 
Sbjct: 193 --NREALYFKAGRELEDKNKKAYRQTFTAISDAYPHDAYAKYIKA 235



 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 48/137 (35%), Gaps = 18/137 (13%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-- 94
           G +  + + +      D   +  +Y KA   L+++N     + F   S  +P    A+  
Sbjct: 174 GRKDAADKAIAEVLAKDPTNREALYFKAGRELEDKNKKAYRQTFTAISDAYPHDAYAKYI 233

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           K+  M         K+  AA L +E  +    +  + Y    VG+S           Q+ 
Sbjct: 234 KAQAML-----EEKKFDTAAQLAKELRSM---APKMPYADKTVGLSMYL--------QKN 277

Query: 155 TKLMLQYMSRIVERYTN 171
            +  +    + +    +
Sbjct: 278 YQEAINAYHKAISIRPD 294


>gi|209525366|ref|ZP_03273907.1| Lytic transglycosylase catalytic [Arthrospira maxima CS-328]
 gi|209494217|gb|EDZ94531.1| Lytic transglycosylase catalytic [Arthrospira maxima CS-328]
          Length = 730

 Score = 43.6 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 66/214 (30%), Gaps = 33/214 (15%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-----FAGVARKSLLMSAFVQYSAGK 109
           +  R +Y  A          ++   + +    FP         A    +  A       +
Sbjct: 256 KTPRNMYRHARGLWLSGKIPESRRAYQELIAAFPTQTDPGGEDAGLGRIRLA----RLVE 311

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            ++A  L  + +  +P                 ++        R+T+   Q    ++ +Y
Sbjct: 312 PREALPLLNQVVDNFPNH--AAEALLERANVLDKL--------RSTETASQSRQLLLSQY 361

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
           ++S             R  LA +    GR  L       A    + ++    D+E A +A
Sbjct: 362 SDSEPAAQ-------LRWTLAQQGATAGRLDL-------ASEWARQLITKNPDSELAPQA 407

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
              L           +A +    +  RYP+ Y+A
Sbjct: 408 TFMLGRWARQQGNSQDATKAFEYLLARYPESYYA 441



 Score = 40.1 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 8/72 (11%)

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
           AG+   A+    + IT+ P+S+      +++G             Q  ++   +    ++
Sbjct: 381 AGRLDLASEWARQLITKNPDSELAPQATFMLG--------RWARQQGNSQDATKAFEYLL 432

Query: 167 ERYTNSPYVKGA 178
            RY  S Y   A
Sbjct: 433 ARYPESYYAWRA 444


>gi|299147144|ref|ZP_07040211.1| putative TPR domain protein [Bacteroides sp. 3_1_23]
 gi|298515029|gb|EFI38911.1| putative TPR domain protein [Bacteroides sp. 3_1_23]
          Length = 597

 Score = 43.6 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 63/198 (31%), Gaps = 36/198 (18%)

Query: 61  YEKAVLFL--KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           Y + ++ L  ++    KA     +    FP       SLL          KY    S   
Sbjct: 129 YSQGLVSLYQQQNELDKAAALLEKMVTRFPSKQDPLFSLLDI---YSRQEKYNDVISTLN 185

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
               +  +++ +    + +   Y QM  D        K   Q +  +V+ Y         
Sbjct: 186 RLEKRLGKNEQLSMEKFRI---YLQMKDD--------KKAFQEIESLVQEYP-------- 226

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
              + +        +V +G  YL+ G+   A   +Q VLA   D      A+  +   Y 
Sbjct: 227 ---MDM------RYQVILGDVYLQNGKKQEAYDAYQKVLAVEPD---NPMALFSMASYYE 274

Query: 239 ALALMDEAREVVSLIQER 256
                +  ++ +  +   
Sbjct: 275 QTGQKELYQQQLDTLLLN 292


>gi|194748531|ref|XP_001956698.1| GF24452 [Drosophila ananassae]
 gi|190623980|gb|EDV39504.1| GF24452 [Drosophila ananassae]
          Length = 1164

 Score = 43.6 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 53/141 (37%), Gaps = 24/141 (17%)

Query: 133 VYYLVGMSYAQM------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------R 179
            Y L+ +    +       RD   +++  +  L    +++     + +           +
Sbjct: 601 AYSLIALGNFSLQTLHQPSRDKEKERKHQEKALAIFKQVLRNDPRNIWATNGIGAVLAHK 660

Query: 180 FYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
             V   R+  A  +E         + I   Y+++ +Y++AI  ++  +  +    +  E 
Sbjct: 661 GCVIEARDIFAQVREATADFCDVWLNIAHVYVEQKQYISAIQMYENCMKKFYKHNNV-EV 719

Query: 230 MARLVEAYVALALMDEAREVV 250
           M  L  AY+    + EA+ V+
Sbjct: 720 MQYLARAYLRANKLVEAKAVL 740


>gi|124087400|ref|XP_001346840.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|145474967|ref|XP_001423506.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|50057229|emb|CAH03213.1| Conserved hypothetical protein, TPR domain [Paramecium tetraurelia]
 gi|124390566|emb|CAK56108.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1084

 Score = 43.6 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 2/65 (3%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
            A  +    N+  + +YF +  +  P   +A K+ L  A+  Y+  +Y  A    +  + 
Sbjct: 170 TAQAYFAVGNYKDSLQYFKRALKHKP--NIAGKARLGLAYCYYNLEQYSLAYYAFKRVLQ 227

Query: 123 QYPES 127
             P +
Sbjct: 228 LEPRN 232


>gi|317059242|ref|ZP_07923727.1| tetratricopeptide repeat family protein [Fusobacterium sp. 3_1_5R]
 gi|313684918|gb|EFS21753.1| tetratricopeptide repeat family protein [Fusobacterium sp. 3_1_5R]
          Length = 917

 Score = 43.6 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 27/71 (38%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           ++ A  +  E+ + +A   +      +P    A ++    A     AG      +  + +
Sbjct: 622 FQIADTYYNEKKYQEAANQYKDLFTAYPNGKYAEQARYWYANSLAMAGNQAAFTTEKQNF 681

Query: 121 ITQYPESKNVD 131
           +  YP S  VD
Sbjct: 682 MRDYPNSSFVD 692



 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 39/102 (38%), Gaps = 14/102 (13%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           R     LQ   + ++ Y +S         +   RNQ       +G+ Y  + EY  A  +
Sbjct: 38  RNFDAALQQSVQYIKNYPSSS-------RILEMRNQ-------VGKLYFIKREYSKAREQ 83

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
           F+ +LA         E    L   Y AL   D+ R  ++ I+
Sbjct: 84  FRAILAMEPSGSTKNETYYYLARIYAALGENDQNRFALTQIK 125


>gi|305855148|ref|NP_001182266.1| peptidyl-prolyl cis-trans isomerase FKBP4 [Sus scrofa]
 gi|285818414|gb|ADC38880.1| FK506 binding protein 4 [Sus scrofa]
          Length = 456

 Score = 43.6 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 43/144 (29%), Gaps = 26/144 (18%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARKSL-------LMSAFVQYSAGK 109
           E+  ++ KE  + +A   + +      +        A+K+        L  A        
Sbjct: 275 ERGTVYFKEGKYKQALVQYKKIVSWLEYESSFSNEDAQKAQALRLASHLNLAMCYLKLQS 334

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           +  A     + +     ++      +  G ++   + D                ++++ Y
Sbjct: 335 FSAAIENCNKALELDSNNEKG---LFRRGEAHL-AVNDFDL-------ARADFQKVLQLY 383

Query: 170 TNSPYVKGARFYV--TVGRNQLAA 191
             S     A+  +     R QLA 
Sbjct: 384 P-SNKAAKAQLALCQQRIRKQLAR 406



 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 33/80 (41%), Gaps = 2/80 (2%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKAYEYF 80
             L    ++A+C+L      ++ +    ++  D   ++ ++ +    L   +F  A   F
Sbjct: 317 LRLASHLNLAMCYLKLQSFSAAIENCNKALELDSNNEKGLFRRGEAHLAVNDFDLARADF 376

Query: 81  NQCSRDFPFAGVARKSLLMS 100
            +  + +P +  A K+ L  
Sbjct: 377 QKVLQLYP-SNKAAKAQLAL 395


>gi|225873829|ref|YP_002755288.1| tetratricopeptide repeat protein [Acidobacterium capsulatum ATCC
           51196]
 gi|225792798|gb|ACO32888.1| tetratricopeptide repeat protein [Acidobacterium capsulatum ATCC
           51196]
          Length = 734

 Score = 43.6 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 42/205 (20%), Positives = 74/205 (36%), Gaps = 26/205 (12%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL-MSAFVQYSAGKYQQAASLGEEY 120
           E A+   +   +S+A E F+      P +     +LL   A  ++ AG    A SL ++ 
Sbjct: 120 ELAIARAQAGQYSQAAENFDAALALAPNSP----ALLVEYARSEFQAGNLPHAKSLAQQI 175

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           I QYP +KN      +   S     +    D +A +  L     +   + N   +  A  
Sbjct: 176 IQQYPHNKNA----LVRAYSILGRTQLAQQDAKAARKNLALAVALKPNFPNGYNLAAACL 231

Query: 181 YVTVGR-------NQLAAK------EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            +   +       +  A+        +  G+ YL       AI  F+  +A       A 
Sbjct: 232 ALEDQKCAAKIFSDMQASYGNTAVLHMYFGQAYLNSDFQRLAIAEFEKAIALNPKLPGAH 291

Query: 228 EAMARLVEAYVALAL-MDEAREVVS 251
                L  AY+A    +D+A + + 
Sbjct: 292 ---YSLAAAYLATQQSIDKAEDELR 313


>gi|195490356|ref|XP_002093105.1| GE21142 [Drosophila yakuba]
 gi|194179206|gb|EDW92817.1| GE21142 [Drosophila yakuba]
          Length = 1148

 Score = 43.6 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 53/141 (37%), Gaps = 24/141 (17%)

Query: 133 VYYLVGMSYAQM------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------R 179
            Y L+ +    +       RD   +++  +  L    +++     + +           +
Sbjct: 601 AYSLIALGNFSLQTLHQPSRDKEKERKHQEKALAIFKQVLRNDPRNIWATNGIGAVLAHK 660

Query: 180 FYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
             V   R+  A  +E         + I   Y+++ +Y++AI  ++  +  +    +  E 
Sbjct: 661 GCVIEARDIFAQVREATADFCDVWLNIAHVYVEQKQYISAIQMYENCMKKFYKHNNV-EV 719

Query: 230 MARLVEAYVALALMDEAREVV 250
           M  L  AY+    + EA+ V+
Sbjct: 720 MQYLARAYLRANKLVEAKAVL 740


>gi|257452701|ref|ZP_05618000.1| TPR repeat-containing protein [Fusobacterium sp. 3_1_5R]
 gi|257466562|ref|ZP_05630873.1| TPR repeat-containing protein [Fusobacterium gonidiaformans ATCC
           25563]
 gi|315917717|ref|ZP_07913957.1| tetratricopeptide repeat family protein [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|313691592|gb|EFS28427.1| tetratricopeptide repeat family protein [Fusobacterium
           gonidiaformans ATCC 25563]
          Length = 915

 Score = 43.6 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 27/71 (38%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           ++ A  +  E+ + +A   +      +P    A ++    A     AG      +  + +
Sbjct: 620 FQIADTYYNEKKYQEAANQYKDLFTAYPNGKYAEQARYWYANSLAMAGNQAAFTTEKQNF 679

Query: 121 ITQYPESKNVD 131
           +  YP S  VD
Sbjct: 680 MRDYPNSSFVD 690



 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 39/102 (38%), Gaps = 14/102 (13%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           R     LQ   + ++ Y +S         +   RNQ       +G+ Y  + EY  A  +
Sbjct: 36  RNFDAALQQSVQYIKNYPSSS-------RILEMRNQ-------VGKLYFIKREYSKAREQ 81

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
           F+ +LA         E    L   Y AL   D+ R  ++ I+
Sbjct: 82  FRAILAMEPSGSTKNETYYYLARIYAALGENDQNRFALTQIK 123


>gi|194864807|ref|XP_001971117.1| GG14779 [Drosophila erecta]
 gi|190652900|gb|EDV50143.1| GG14779 [Drosophila erecta]
          Length = 1150

 Score = 43.6 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 53/141 (37%), Gaps = 24/141 (17%)

Query: 133 VYYLVGMSYAQM------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------R 179
            Y L+ +    +       RD   +++  +  L    +++     + +           +
Sbjct: 601 AYSLIALGNFSLQTLHQPSRDKEKERKHQEKALAIFKQVLRNDPRNIWATNGIGAVLAHK 660

Query: 180 FYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
             V   R+  A  +E         + I   Y+++ +Y++AI  ++  +  +    +  E 
Sbjct: 661 GCVIEARDIFAQVREATADFCDVWLNIAHVYVEQKQYISAIQMYENCMKKFYKHNNV-EV 719

Query: 230 MARLVEAYVALALMDEAREVV 250
           M  L  AY+    + EA+ V+
Sbjct: 720 MQYLARAYLRANKLVEAKAVL 740


>gi|307150171|ref|YP_003885555.1| Sigma 54 interacting domain-containing protein [Cyanothece sp. PCC
            7822]
 gi|306980399|gb|ADN12280.1| Sigma 54 interacting domain protein [Cyanothece sp. PCC 7822]
          Length = 1290

 Score = 43.6 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 11/106 (10%)

Query: 58   REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
             E+Y+KAV  LK + +        +  + +P      K+            +Y +A    
Sbjct: 1190 NELYQKAVEKLKAKEWKTGIAILTRSIQIYPQNF---KAYYDRGLAFIELKQYYRAIDDF 1246

Query: 118  EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
             E +  YP      Y+Y   G  Y ++  +    Q+A     +   
Sbjct: 1247 NEVLRFYPN----AYIYDKRGECYGKLGNE----QQAAADFQKARE 1284



 Score = 42.8 bits (100), Expect = 0.048,   Method: Composition-based stats.
 Identities = 11/94 (11%), Positives = 33/94 (35%), Gaps = 15/94 (15%)

Query: 106  SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
             A +++   ++    I  YP++      YY  G+++ ++        +     +   + +
Sbjct: 1201 KAKEWKTGIAILTRSIQIYPQNFK---AYYDRGLAFIEL--------KQYYRAIDDFNEV 1249

Query: 166  VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
            +  Y N  Y+            +L  ++     +
Sbjct: 1250 LRFYPN-AYIYD---KRGECYGKLGNEQQAAADF 1279


>gi|161870308|ref|YP_001599478.1| periplasmic protein [Neisseria meningitidis 053442]
 gi|161595861|gb|ABX73521.1| periplasmic protein [Neisseria meningitidis 053442]
 gi|261392299|emb|CAX49825.1| conserved hypothetical TPR-containing periplasmic protein
           [Neisseria meningitidis 8013]
          Length = 238

 Score = 43.6 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 43/125 (34%), Gaps = 11/125 (8%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S   V   + +Y +A+   K   FS A               +A++S+ +    +   G 
Sbjct: 112 SAHTVETAQNLYNQALKHYKSGRFSAAASLLKGADGGD-GGSIAQRSMYLLLQSRARMGN 170

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVER 168
            +    +G  Y  ++ +S       + +G    +   +D+                +++ 
Sbjct: 171 CESVIEIGGRYANRFKDSPTAPEAIFKIGECQYRLQQKDIAR---------ATWRSLIQA 221

Query: 169 YTNSP 173
           Y +SP
Sbjct: 222 YPSSP 226



 Score = 35.1 bits (80), Expect = 9.9,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 18/43 (41%)

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + D+  A EA+ ++ E    L   D AR     + + YP   
Sbjct: 184 RFKDSPTAPEAIFKIGECQYRLQQKDIARATWRSLIQAYPSSP 226


>gi|156933752|ref|YP_001437668.1| tetratricopeptide repeat protein [Cronobacter sakazakii ATCC
           BAA-894]
 gi|156532006|gb|ABU76832.1| hypothetical protein ESA_01578 [Cronobacter sakazakii ATCC BAA-894]
          Length = 389

 Score = 43.6 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 64/195 (32%), Gaps = 42/195 (21%)

Query: 64  AVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
              ++    + +A   FNQ     DF    + +   +  A        +Q+A    E  +
Sbjct: 114 GRDYMAAGLYDRAEGMFNQLVDETDFRVGALQQLLQIYQA-----TSDWQKAIDAAERLV 168

Query: 122 TQYPESKNVDYVYY-----LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
               E + V+  ++     L  MS   M R            +  + +      NS    
Sbjct: 169 KLGKEHQRVEIAHFYCELALQAMSNEDMDR-----------AMSLLKKGAAADRNS---- 213

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                        A   + +GR ++ RG+Y  A+   + V++   D E   E +  L   
Sbjct: 214 -------------ARVSIMMGRIFMARGDYAHAVEMLEKVIS--QDRELVSETLEMLQVC 258

Query: 237 YVALALMDEAREVVS 251
           Y  L   DE  E + 
Sbjct: 259 YQQLGKPDEWAEFLR 273


>gi|110637714|ref|YP_677921.1| TPR repeat-containing protein [Cytophaga hutchinsonii ATCC 33406]
 gi|110280395|gb|ABG58581.1| TPR repeat-containing protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 515

 Score = 43.6 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 36/259 (13%), Positives = 76/259 (29%), Gaps = 59/259 (22%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP------FA 90
           G+  ++  D       D  Y      +A        + ++   +++     P      F 
Sbjct: 247 GFRDEAIADFTTAIKYDSSYAEAYQNRAHELFLLSRYEESITDYSKVIALQPDNFQAYFG 306

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
               K+           GK+ +A +   + I  YP   N  Y Y+  G S + +      
Sbjct: 307 RGQSKAEF---------GKHVEAIADYNKAIVLYP---NFTYAYFYRGFSKSYLDNFSD- 353

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY----------- 199
                   ++  ++ ++   N      A F     + +    E  I  Y           
Sbjct: 354 -------AIKDFNKAIQLDPND---HPAYFNRAYCKREEGDYEGAIKDYNKCISLKPQYE 403

Query: 200 --YLK-------RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR--- 247
             Y +        G+  AAI  +  ++  + +     E+ A     +  + +  +     
Sbjct: 404 EAYFQKANTLYMMGDKTAAIKEYDEIVKKFPN-----ESAAYANRGFFNMNIKKDKEAMD 458

Query: 248 --EVVSLIQERYPQGYWAR 264
                  + E  P+ Y  R
Sbjct: 459 DFNKAITLNENNPEAYRYR 477



 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 53/154 (34%), Gaps = 17/154 (11%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
             + +D       D       + +A    +E ++  A + +N+C    P      ++   
Sbjct: 352 SDAIKDFNKAIQLDPNDHPAYFNRAYCKREEGDYEGAIKDYNKCISLKP--QY-EEAYFQ 408

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
            A   Y  G    A    +E + ++P +++  Y     G     + +D        K  +
Sbjct: 409 KANTLYMMGDKTAAIKEYDEIVKKFP-NESAAYAN--RGFFNMNIKKD--------KEAM 457

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
              ++ +     +     A  Y  V ++++  KE
Sbjct: 458 DDFNKAITL---NENNPEAYRYRAVLKSEIKDKE 488



 Score = 35.5 bits (81), Expect = 7.5,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 60/187 (32%), Gaps = 37/187 (19%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           + + +   K+ NF  AY+ F   +   P      ++       +   G Y  A +  ++ 
Sbjct: 169 FNEGLELFKKGNFIGAYDKFKAAAVADPNGY---EAYYYMGLCKMELGDYPAAITNFDKA 225

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           I   P+       +   GMS     ++   D       +   +  ++   +S Y +  + 
Sbjct: 226 IDIKPKYTA---AFSKRGMS---KSKEGFRD-----EAIADFTTAIKY--DSSYAEAYQN 272

Query: 181 YVTVGRNQLAAKEVEIGRY-------------YLKR-------GEYVAAIPRFQLVLANY 220
                   L+  E  I  Y             Y  R       G++V AI  +   +  Y
Sbjct: 273 RAHELF-LLSRYEESITDYSKVIALQPDNFQAYFGRGQSKAEFGKHVEAIADYNKAIVLY 331

Query: 221 SDAEHAE 227
            +  +A 
Sbjct: 332 PNFTYAY 338


>gi|77021665|gb|ABA60691.1| polaris [Danio rerio]
          Length = 824

 Score = 43.6 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 32/258 (12%), Positives = 80/258 (31%), Gaps = 53/258 (20%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
           Q+ R   L    D      +  K      ++++ KA E++ +  R+   +     +L   
Sbjct: 469 QADRYAELAMSADRYNPAALINKGNTLFVKEDYEKAAEFYKESLRND--SSCTE-ALYNL 525

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY-------------AQMIRD 147
                  G+ ++A      ++  +   +N   V Y +   Y              Q+   
Sbjct: 526 GLTYKRLGRLEEALDC---FLKLHAILRNSAQVMYQLANLYEMLEDPHQAIEWLMQLTSV 582

Query: 148 VPYDQRAT-------------KLMLQYMSRIVERYT--------------NSPYVKGARF 180
            P D +                   QY       +               ++ + + A  
Sbjct: 583 TPTDAQVLAKLGDLYDNEGDKSQAFQYYYESYRYFPSNISVIEWLGAYYIDTQFCEKAIQ 642

Query: 181 ---YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
                T+ +      ++ +   Y + G Y+ A+  ++ +   + +     E +  LV   
Sbjct: 643 YFERATLIQPTQVKWQLMVASCYRRSGNYLKALETYKEIHRKFPE---NVECLRFLVRLC 699

Query: 238 VALALMDEAREVVSLIQE 255
             + L  E ++  + +++
Sbjct: 700 TDMGLK-EVQDYATKLKK 716


>gi|42523907|ref|NP_969287.1| hypothetical protein Bd2474 [Bdellovibrio bacteriovorus HD100]
 gi|39576114|emb|CAE80280.1| conserved hypothetical protein ybgf [Bdellovibrio bacteriovorus
           HD100]
          Length = 175

 Score = 43.6 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 46/135 (34%), Gaps = 17/135 (12%)

Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
           +G+ YA+M+     D          +  ++ RY  S Y   A                  
Sbjct: 55  IGL-YAEMVSAYQADDEIAFKSR--LQSLLSRYPQSSYADNAL--------------FVA 97

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           GR  +  G Y  AI  F  +   Y  +     A       Y  + L + +R+ +  ++ R
Sbjct: 98  GRMAVDHGNYAEAIKYFAQIEKQYPRSNKVAAAKFAKAMTYKKMNLPEFSRKALLEVRSR 157

Query: 257 YPQGYWARYVETLVK 271
           YP    +   +  +K
Sbjct: 158 YPGSPESFRADAELK 172



 Score = 35.9 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 27/79 (34%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                    ++    + +   N+++A +YF Q  + +P +     +    A         
Sbjct: 85  PQSSYADNALFVAGRMAVDHGNYAEAIKYFAQIEKQYPRSNKVAAAKFAKAMTYKKMNLP 144

Query: 111 QQAASLGEEYITQYPESKN 129
           + +     E  ++YP S  
Sbjct: 145 EFSRKALLEVRSRYPGSPE 163


>gi|330793163|ref|XP_003284655.1| hypothetical protein DICPUDRAFT_45625 [Dictyostelium purpureum]
 gi|325085454|gb|EGC38861.1| hypothetical protein DICPUDRAFT_45625 [Dictyostelium purpureum]
          Length = 515

 Score = 43.6 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 43/130 (33%), Gaps = 24/130 (18%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAG-VARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           KA  +  EQ +  A E + +  + +P A   + ++     F  +    Y  A       I
Sbjct: 59  KANKYFAEQKYDLATELYTKAIKYYPTAILYSNRA-----FSNFKREYYVNALQDAT--I 111

Query: 122 TQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           + +    N  Y   YY +G ++  +               +    ++ +       K A+
Sbjct: 112 S-HQMDPN--YIKAYYRLGSAHLAL--------GNYNEAKKNFKELLNKEPK---EKDAK 157

Query: 180 FYVTVGRNQL 189
               +  + +
Sbjct: 158 IKFNLCNSLI 167


>gi|313159211|gb|EFR58584.1| tetratricopeptide repeat protein [Alistipes sp. HGB5]
          Length = 272

 Score = 43.6 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 10/85 (11%), Positives = 24/85 (28%), Gaps = 3/85 (3%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
                        E+++ A       NF  A E + +          + K     A   +
Sbjct: 32  AEQSESAPRPTTDELWDMANTAYINGNFHSAAEVYEEILSR---GVSSVKLYYNLANAYF 88

Query: 106 SAGKYQQAASLGEEYITQYPESKNV 130
              +  +A    +  +   P + ++
Sbjct: 89  KEDRIGKAILYYKRALRLAPGNDDI 113


>gi|307721736|ref|YP_003892876.1| Tetratricopeptide repeat-containing protein [Sulfurimonas
           autotrophica DSM 16294]
 gi|306979829|gb|ADN09864.1| Tetratricopeptide repeat protein [Sulfurimonas autotrophica DSM
           16294]
          Length = 784

 Score = 43.6 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 59/174 (33%), Gaps = 26/174 (14%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPES-KNVDYV-YYLVGMSYAQMIRDVPYDQR 153
           S +   F  Y            +  I   P   K ++ V  YL    Y +        ++
Sbjct: 142 SQIALNFPFYLDKDKLPYVGSLD--IKGNPVHIKKIEDVKEYLKVKKYYK--------EK 191

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
             +  LQ ++ +++ Y N+ +     +Y                + Y K  ++   I   
Sbjct: 192 QYESCLQTVNDVLKTYPNTLFRAELLYYKI--------------KVYAKIKDWDNVISYA 237

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
           +  L  YS  E+  E ++ + +AY  L    +A      +   +    +A+Y  
Sbjct: 238 KEFLREYSSDENVAEVLSLMAKAYAKLGQNTDADYFFDRLFTEHTDTKFAQYGY 291



 Score = 39.3 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 46/116 (39%), Gaps = 8/116 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y K   + KE+ +    +  N   + +P      + L     V      +    S  +E+
Sbjct: 181 YLKVKKYYKEKQYESCLQTVNDVLKTYPNTLFRAELLYYKIKVYAKIKDWDNVISYAKEF 240

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
           + +Y   +NV  V  L+  +YA++ ++   D         +  R+   +T++ + +
Sbjct: 241 LREYSSDENVAEVLSLMAKAYAKLGQNTDAD--------YFFDRLFTEHTDTKFAQ 288


>gi|158337072|ref|YP_001518247.1| TPR domain-containing protein [Acaryochloris marina MBIC11017]
 gi|158307313|gb|ABW28930.1| TPR domain protein [Acaryochloris marina MBIC11017]
          Length = 594

 Score = 43.6 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 66/186 (35%), Gaps = 35/186 (18%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           + V    + NF  A + +++  +       A  + +   +     G  + A +   + I 
Sbjct: 231 QGVEKYGKGNFKGAIQDYDKAIQIN--GNYA-LAYVNRGYAHTVLGNSKSAIADYTKVIQ 287

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
             P++  +  +Y   G+++A          +     LQ  +++++R   +P       Y+
Sbjct: 288 LNPKNIELTKIYLNRGLAFAAA--------KNYPAALQDFNQVLQRDAKNPEA-----YL 334

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE--AYVAL 240
             GR   A+            G ++AAI  +  V+     +     A+A      AY  +
Sbjct: 335 NRGRAHAAS------------GNHLAAIQDYGQVIKFQPKS-----ALAYFNRGVAYSKV 377

Query: 241 ALMDEA 246
                A
Sbjct: 378 GDNATA 383



 Score = 39.3 bits (91), Expect = 0.60,   Method: Composition-based stats.
 Identities = 21/184 (11%), Positives = 48/184 (26%), Gaps = 30/184 (16%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D +       +        N   A + + Q  +   F   +  +           G    
Sbjct: 326 DAKNPEAYLNRGRAHAASGNHLAAIQDYGQVIK---FQPKSALAYFNRGVAYSKVGDNAT 382

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A +   + +             Y  G+        V  +Q  ++  +   +  ++   ++
Sbjct: 383 ALADYSKALQL---DPKYAAALYNRGL--------VQLNQGNSQDAIADFTASIQM--DT 429

Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRY-------------YLKRGEYVAAIPRFQLVLAN 219
            Y   A         +    E  I  +             Y  RG   +   + +  +A+
Sbjct: 430 KYAA-AYKNRGTAHLKAGNTEAAIADFTQAITFNAEDTLAYYNRGIAHSTAGQNEAAIAD 488

Query: 220 YSDA 223
           YS  
Sbjct: 489 YSQV 492



 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 61/187 (32%), Gaps = 36/187 (19%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGK 109
           D +Y   +Y + ++ L + N   A   F         +  A    +           AG 
Sbjct: 394 DPKYAAALYNRGLVQLNQGNSQDAIADFTASIQMDTKYA-AAYKNRGT-----AHLKAGN 447

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            + A +   + IT   E       YY  G++++   ++        +  +   S++++  
Sbjct: 448 TEAAIADFTQAITFNAEDTL---AYYNRGIAHSTAGQN--------EAAIADYSQVLKLD 496

Query: 170 TN--SPYV-----------KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
               + Y            + A       +   A  E      Y  R    +A+ +++  
Sbjct: 497 PKFAAAYTNRGNLHAAQGDRDAALK-DYSQAIEANPENATA--YNNRALIHSALRQYEEA 553

Query: 217 LANYSDA 223
           L++Y  A
Sbjct: 554 LSDYQQA 560


>gi|42522407|ref|NP_967787.1| adventurous gliding motility protein U [Bdellovibrio bacteriovorus
           HD100]
 gi|39574939|emb|CAE78780.1| adventurous gliding motility protein U [Bdellovibrio bacteriovorus
           HD100]
          Length = 1066

 Score = 43.6 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 82/229 (35%), Gaps = 25/229 (10%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D   D +  + ++     + +     K  +Y+ + +R +P +    ++    A   +   
Sbjct: 194 DFPRDEKMSQALFFLGYNYFELGEVKKGADYYEKLTRGYPNSQFVGEAHFALAEYYFENE 253

Query: 109 KYQQAASLGEEYI---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
           ++  A      ++    ++       +  Y       ++           +  + Y+  I
Sbjct: 254 RWANAYKEY-SFLIKEKKHRLHT---FALYKGSWCLFRL--------GKVQQAMTYLEYI 301

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEV-EIGRYYLKRGEYVAAIPRFQLVL-ANYSDA 223
           ++    +         + V R +L  + + +I  +Y + G+   A   F+ ++  NY  +
Sbjct: 302 IKA-GKNETGDQLASRMKVNRTRLEGEALRDIVVFYAEGGDPNKAADYFKNLVGNNY--S 358

Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA-RYVETLVK 271
            +    + RL   Y      D +R+V  L+  + P    A  Y   +V+
Sbjct: 359 PY----LERLAYQYSDRGNKDASRDVFKLLISQNPTAPKAFEYQYQIVQ 403



 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 24/61 (39%)

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
           I   Q  +  +  +E A E   R+   Y      D+A      I +++P   +A Y   L
Sbjct: 572 IKAGQWYVEKFPSSEKAVEIKFRMGRLYYQSNHFDQATAHFRDIVKQHPNTKYAEYSANL 631

Query: 270 V 270
           +
Sbjct: 632 L 632



 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 30/73 (41%), Gaps = 14/73 (19%)

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
            VE++ +S      +F +              GR Y +   +  A   F+ ++  + + +
Sbjct: 578 YVEKFPSSEKAVEIKFRM--------------GRLYYQSNHFDQATAHFRDIVKQHPNTK 623

Query: 225 HAEEAMARLVEAY 237
           +AE +   L++ Y
Sbjct: 624 YAEYSANLLLDIY 636



 Score = 35.5 bits (81), Expect = 9.3,   Method: Composition-based stats.
 Identities = 11/66 (16%), Positives = 24/66 (36%), Gaps = 5/66 (7%)

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            R Y K+     A+  ++    ++   E   +A+  L   Y  L  + +  +    +   
Sbjct: 177 AREYNKK-----AVQLYEWFQRDFPRDEKMSQALFFLGYNYFELGEVKKGADYYEKLTRG 231

Query: 257 YPQGYW 262
           YP   +
Sbjct: 232 YPNSQF 237


>gi|282897473|ref|ZP_06305475.1| TPR repeat protein [Raphidiopsis brookii D9]
 gi|281198125|gb|EFA73019.1| TPR repeat protein [Raphidiopsis brookii D9]
          Length = 548

 Score = 43.6 bits (102), Expect = 0.033,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 39/131 (29%), Gaps = 36/131 (27%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--------------MSAFVQ--- 104
            +A       ++  A E ++Q     P   +  + +L                 +     
Sbjct: 371 NRAEARYLIGDYQGAIEDYSQVLSIHP--DLLDQPILVGDIGELFNIKCHDEVIYKNRAD 428

Query: 105 --YSAGKYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
             Y  G+Y++A     + I       N++Y   YY  G  Y              +  + 
Sbjct: 429 HLYQLGEYEEAVENYNQAIAL-----NINYVDAYYQRGKIYFNR--------GIYEAAVD 475

Query: 161 YMSRIVERYTN 171
             S +++   N
Sbjct: 476 DFSMVIKTQPN 486



 Score = 41.6 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 52/168 (30%), Gaps = 37/168 (22%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPF----AGVARKSLLMSAFVQYSAGKYQQAASL 116
           Y +A+   K+ ++ +  E  ++ +    +    + +   +        Y  G Y  A S 
Sbjct: 262 YSQALQNNKKNSYYQ-EELRSELNLSHKYADNISNIDIHAYYKLGLAYYQLGDYDMAISN 320

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP--Y 174
             + I       N    Y   G+++ +         R     ++  S+ +         Y
Sbjct: 321 YNQVINANVNHSN---AYNKRGLAHYKS--------RNYHSAIEDFSQAISINPELAINY 369

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
              A                     YL  G+Y  AI  +  VL+ + D
Sbjct: 370 KNRAEAR------------------YL-IGDYQGAIEDYSQVLSIHPD 398


>gi|308064052|gb|ADO05939.1| paralysed flagella protein [Helicobacter pylori Sat464]
          Length = 803

 Score = 43.6 bits (102), Expect = 0.033,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 50/137 (36%), Gaps = 9/137 (6%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             +T   Y    Y +A   +  Q +  A    ++  +++P     +   L+        G
Sbjct: 188 PLLTTKGYDLNAYLEAKKQINSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIALGQLG 247

Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            K      +G ++I  YP   ++  V Y V  +  +            K  ++Y  RI+ 
Sbjct: 248 IKKSLLIEIGAKWIKNYPTDPSIPEVLYYVAKALDEN--------NNYKQAMRYYKRILL 299

Query: 168 RYTNSPYVKGARFYVTV 184
            Y NS Y   A+  + +
Sbjct: 300 EYKNSRYAPLAQMRLAI 316



 Score = 42.8 bits (100), Expect = 0.057,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 32/99 (32%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
             + RA   +    ++   + L I     +        +       +  TD      +Y 
Sbjct: 217 RTISRAFKNYPQTIFKKDLYLLEIIALGQLGIKKSLLIEIGAKWIKNYPTDPSIPEVLYY 276

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
            A    +  N+ +A  Y+ +   ++  +  A  + +  A
Sbjct: 277 VAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRLA 315


>gi|254670260|emb|CBA05515.1| conserved hypothetical protein [Neisseria meningitidis alpha153]
          Length = 238

 Score = 43.6 bits (102), Expect = 0.033,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 43/125 (34%), Gaps = 11/125 (8%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S   V   + +Y +A+   K   FS A               +A++S+ +    +   G 
Sbjct: 112 SAHTVETAQNLYNQALKHYKSGRFSAAAALLKGADGGD-GGSIAQRSMYLLLQSRARMGN 170

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVER 168
            +    +G  Y  ++ +S       + +G    +   +D+                +++ 
Sbjct: 171 CESVIEIGGRYANRFKDSPTAPEAIFKIGECQYRLQQKDIAR---------ATWRSLIQA 221

Query: 169 YTNSP 173
           Y +SP
Sbjct: 222 YPSSP 226


>gi|21229432|ref|NP_635354.1| O-linked N-acetylglucosamine transferase [Methanosarcina mazei Go1]
 gi|20908028|gb|AAM33026.1| O-linked N-acetylglucosamine transferase [Methanosarcina mazei Go1]
          Length = 350

 Score = 43.6 bits (102), Expect = 0.033,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 37/110 (33%), Gaps = 16/110 (14%)

Query: 63  KAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           +     K   + +A + F++    +          L       Y  G+Y++A     + +
Sbjct: 202 RGKSSYKLGKYEEAVKEFDRCLESN----PKDADILRNKGSALYMLGRYEEAIEAFNKSL 257

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
              P   +    + L G +   + R         +  L+ + + ++R  N
Sbjct: 258 ELNPRDAD---AWNLKGSTLYMIGR--------PEEALRALDKALQRNPN 296


>gi|22298476|ref|NP_681723.1| putative transglycosylase [Thermosynechococcus elongatus BP-1]
 gi|22294656|dbj|BAC08485.1| tll0933 [Thermosynechococcus elongatus BP-1]
          Length = 704

 Score = 43.6 bits (102), Expect = 0.033,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 66/226 (29%), Gaps = 40/226 (17%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
                +Y            + A   +    + FP +  A  + L  A           A 
Sbjct: 244 PTPLNLYRVGRGRQLSGERTGAIAAYQALIQRFPNSSEAALAQLRLAR---------LAK 294

Query: 115 SLGEEY------ITQYPESKN---VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
           +  E        +    E++             +   Q  R++      TK   Q   ++
Sbjct: 295 TAAERLPLLAKCLQLATENQAPAIAADAL----LEQYQAYREL----GNTKGAQQSQQQL 346

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
            + Y  S             R QLA           ++ ++  A    + +L    ++E 
Sbjct: 347 FKTYPQSSAAAE-------LRWQLAQGA-------AQKRQWSQAQQWVREILKFNPESEL 392

Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           A  A     +           R+   L+ ERYP  Y+A    +L++
Sbjct: 393 AARAAFWQGKWQGEAGQPQAQRQTWQLVTERYPHTYYAWRAASLLQ 438


>gi|258545518|ref|ZP_05705752.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
 gi|258519218|gb|EEV88077.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
          Length = 261

 Score = 43.6 bits (102), Expect = 0.033,   Method: Composition-based stats.
 Identities = 39/272 (14%), Positives = 85/272 (31%), Gaps = 41/272 (15%)

Query: 18  QLYKFALTIF---FSIAVCFLVGWERQSSRDVYLDSVTDVRYQ-REVYEK----AVLFLK 69
           ++ KF L        +  C   G+   ++ D  + +V   +    + Y+        +L+
Sbjct: 2   KMKKFPLLCAAATVLLGGCSTFGFGGSNNDDDNVPTVVKKKADYGQAYKDYVELGAQYLQ 61

Query: 70  EQNFSKAYEYFN-QCS-RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
              +  A             P       ++L                 + ++ I  +PE 
Sbjct: 62  MGRYDLAEPKLQRAIEIDSHPPEAWNILAVL-----YEEKRDIASGNQVYQKLIHSHPE- 115

Query: 128 KNVDYVYYLVGMSYAQMIR-DVPYD---QRATKLMLQYMSRI-----------VERYTNS 172
                  YL+G +           D   Q     M    +             ++R   S
Sbjct: 116 -------YLLGYTNYATFLCKFDRDSEMQTLLGQMRGRNAEFKAAAGIAEGNCMQRRGQS 168

Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
              + A         Q     + + +  L++G+Y +A+ R+  V+  Y    ++ E++  
Sbjct: 169 GTAENAYKQALAANPQAEGALLPLAQISLQKGDYASAL-RYLRVVHTY--VGYSPESVKL 225

Query: 233 LVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
            +EA           E+V +++  Y     A+
Sbjct: 226 GIEAARKSGDTRMEEELVRVMRGNYKSTPEAK 257


>gi|114769353|ref|ZP_01446979.1| hypothetical protein OM2255_06465 [alpha proteobacterium HTCC2255]
 gi|114550270|gb|EAU53151.1| hypothetical protein OM2255_06465 [alpha proteobacterium HTCC2255]
          Length = 172

 Score = 43.6 bits (102), Expect = 0.033,   Method: Composition-based stats.
 Identities = 16/124 (12%), Positives = 44/124 (35%), Gaps = 14/124 (11%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           + ++ +  + + +F+ + E+         +  +  ++  M A V +   KY  + S  ++
Sbjct: 55  LLKRGMNAMAQGDFTASVEHLTAAID---YTPMFAEAWNMRATVFFLMEKYALSVSDIQQ 111

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +   P             +S   MI +        K  L+   +++E +  S     + 
Sbjct: 112 TLKLNPRHFG--------ALSGLGMIFERS---GQPKQALEVYKKLLEVHPRSSNAITSV 160

Query: 180 FYVT 183
             + 
Sbjct: 161 NRLI 164


>gi|84683982|ref|ZP_01011884.1| TPR domain protein [Maritimibacter alkaliphilus HTCC2654]
 gi|84667735|gb|EAQ14203.1| TPR domain protein [Rhodobacterales bacterium HTCC2654]
          Length = 578

 Score = 43.6 bits (102), Expect = 0.033,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 72/228 (31%), Gaps = 40/228 (17%)

Query: 45  DVYLDSVTDVRYQREVYEKAV----LFLKEQNFSKA-YEYFNQCSRDFPFAGVARKSLLM 99
           ++ + +   +      Y +A+      L+  + ++A  E     +  +P   +A    + 
Sbjct: 313 ELAVQTYDQIAPDSRAYVQAMMGKASALRRSDQAEAGIETLTTLADRYP--DLAP-VHVA 369

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV-YYLVGMSYAQMIRDVPYDQRATKLM 158
                     + +A +  +  I+ YPE     +  Y+  G+   +  R         +  
Sbjct: 370 LGDAYRYEEAWPEAIAAYDRAISLYPEEVAAQWAVYFARGIVNERGGR--------WEDA 421

Query: 159 LQYMSRIVERYTNSP-------YV--------KGARFYVTVGRNQLAAKEVEIGR----Y 199
            +   + +E   + P       Y           A   +    +Q    E  I       
Sbjct: 422 ERDFRKALELEPDQPSVLNYLGYSLVEKRENLDEALGMIEKAVDQ-RPNEGYIVDSLGWV 480

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
           Y + G Y  A+P+ +  ++         +    L + Y A+    EA 
Sbjct: 481 YYRLGRYDEAVPQMEKAVSLMPVDPVVND---HLGDVYWAVGRTREAE 525


>gi|113477029|ref|YP_723090.1| hypothetical protein Tery_3529 [Trichodesmium erythraeum IMS101]
 gi|110168077|gb|ABG52617.1| protein of unknown function DUF323 [Trichodesmium erythraeum
           IMS101]
          Length = 929

 Score = 43.6 bits (102), Expect = 0.033,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 27/71 (38%), Gaps = 3/71 (4%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           + ++    Y + + +++ +N+  A +   Q  R  P   VA        +  Y  G+YQ 
Sbjct: 564 NPKFADGYYRRGLAYIQLENYGDAVDDLTQVIRLDPSHAVAFNYR---GYAYYKLGEYQW 620

Query: 113 AASLGEEYITQ 123
           A       I  
Sbjct: 621 AVDDYNRAINL 631



 Score = 36.6 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 27/96 (28%), Gaps = 12/96 (12%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLGE 118
           Y + +     + + +A   F       P FA    R+ L            Y  A     
Sbjct: 538 YLRGIDKFNLEKYEEAIIDFGYVISLNPKFADGYYRRGL-----AYIQLENYGDAVDDLT 592

Query: 119 EYITQYPESKNV----DYVYYLVGMSYAQMIRDVPY 150
           + I   P          Y YY +G  Y   + D   
Sbjct: 593 QVIRLDPSHAVAFNYRGYAYYKLG-EYQWAVDDYNR 627


>gi|261252512|ref|ZP_05945085.1| TPR repeat-containing protein [Vibrio orientalis CIP 102891]
 gi|260935903|gb|EEX91892.1| TPR repeat-containing protein [Vibrio orientalis CIP 102891]
          Length = 256

 Score = 43.6 bits (102), Expect = 0.034,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 43/130 (33%), Gaps = 27/130 (20%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               Y  A +  +++   YP+S      +Y +G  Y    +D        K  ++  + +
Sbjct: 152 KKRDYTGAIAAFQQFQKDYPDSTFTPNSHYWLGQLYFAKKQD--------KDAVKSFAAV 203

Query: 166 VERYTNSPYVKGARFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
           V  Y +S     A   +     RN  A +                A   +Q V+  Y  +
Sbjct: 204 V-AYKDSNKRADALVKLGDIAQRNNNAEQ----------------AKKYYQQVVDEYPTS 246

Query: 224 EHAEEAMARL 233
             A  A  RL
Sbjct: 247 ASANLAKERL 256



 Score = 39.7 bits (92), Expect = 0.43,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 45/119 (37%), Gaps = 15/119 (12%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            Q   D+   +R     +    +  + Y +S +   + +++              G+ Y 
Sbjct: 143 YQNSVDLILKKRDYTGAIAAFQQFQKDYPDSTFTPNSHYWL--------------GQLYF 188

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            + +   A+  F  V+A Y D+    +A+ +L +        ++A++    + + YP  
Sbjct: 189 AKKQDKDAVKSFAAVVA-YKDSNKRADALVKLGDIAQRNNNAEQAKKYYQQVVDEYPTS 246



 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 46/133 (34%), Gaps = 22/133 (16%)

Query: 57  QREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY-SAGKYQ--- 111
           ++  Y+ +V   LK+++++ A   F Q  +D+P +     S      + +          
Sbjct: 139 EQTAYQNSVDLILKKRDYTGAIAAFQQFQKDYPDSTFTPNSHYWLGQLYFAKKQDKDAVK 198

Query: 112 --QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
              A    ++       +K  D       +     + D+       +   +Y  ++V+ Y
Sbjct: 199 SFAAVVAYKD------SNKRAD------ALV---KLGDIAQRNNNAEQAKKYYQQVVDEY 243

Query: 170 TNSPYVKGARFYV 182
             S     A+  +
Sbjct: 244 PTSASANLAKERL 256



 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 3/71 (4%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           LK+ +Y  AI  FQ    +Y D+     +   L + Y A     +A +  + +   Y   
Sbjct: 151 LKKRDYTGAIAAFQQFQKDYPDSTFTPNSHYWLGQLYFAKKQDKDAVKSFAAVVA-YKDS 209

Query: 261 YWARYVETLVK 271
              +  + LVK
Sbjct: 210 N--KRADALVK 218


>gi|56461214|ref|YP_156495.1| TPR repeat-containing protein [Idiomarina loihiensis L2TR]
 gi|56180224|gb|AAV82946.1| TPR repeats containing protein [Idiomarina loihiensis L2TR]
          Length = 417

 Score = 43.6 bits (102), Expect = 0.034,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 1/77 (1%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
            + V    + +   +  +Y  A L L +  F +A  + +Q         +  K+ ++ A 
Sbjct: 99  EKVVKESPIPESLEKSTLYSLAQLALSDGQFQRAISFLDQWEGLAEEGEMG-KAWVLKAQ 157

Query: 103 VQYSAGKYQQAASLGEE 119
             Y A KYQ+A SL ++
Sbjct: 158 AYYQADKYQEALSLIDK 174


>gi|125975162|ref|YP_001039072.1| peptidase S41 [Clostridium thermocellum ATCC 27405]
 gi|256003175|ref|ZP_05428167.1| peptidase S41 [Clostridium thermocellum DSM 2360]
 gi|281418417|ref|ZP_06249436.1| peptidase S41 [Clostridium thermocellum JW20]
 gi|125715387|gb|ABN53879.1| peptidase S41 [Clostridium thermocellum ATCC 27405]
 gi|255992866|gb|EEU02956.1| peptidase S41 [Clostridium thermocellum DSM 2360]
 gi|281407501|gb|EFB37760.1| peptidase S41 [Clostridium thermocellum JW20]
 gi|316939327|gb|ADU73361.1| peptidase S41 [Clostridium thermocellum DSM 1313]
          Length = 745

 Score = 43.6 bits (102), Expect = 0.034,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 54/179 (30%), Gaps = 32/179 (17%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K  L     + VC           ++Y             +  A        +  A +
Sbjct: 1   MKKRLLLFILVLGVCLFTSCGNFVKTNIY-------------FSAAESAFDSGKYEDAIK 47

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
           Y+++         +A     ++       GKY++A    ++ I     +K++   Y   G
Sbjct: 48  YYDKVIEADSGNAMAYLGKGLALDA---LGKYEEALEFFDKAIEI---NKDLAKAYNAKG 101

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYT-NSPYVKGARFYVTVGRNQLAAKEVEI 196
            + A + R         +  L+   +  E    NS Y          G N L   E  I
Sbjct: 102 TTLASLER--------YEESLENFKKAAELKPKNSAYQNDV----AYGLNNLGRFEEAI 148



 Score = 39.3 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 66/205 (32%), Gaps = 53/205 (25%)

Query: 49  DSVTDVRYQREVYE-KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           D    +     VY+ K  ++L E N+ +A + F++     P       S +   +  Y  
Sbjct: 322 DEFLAIAEDASVYDMKGQIYLHEYNYPEAIKLFDKAIEVDP--SY-EDSYINKIYCLYLQ 378

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
             Y++      +  T +P S ++ +  Y +G  Y+ M+          +  ++Y+ +  E
Sbjct: 379 KNYKECIEFATKVQTIFPNSADIPW--Y-IGDCYSIMME--------PEKAIEYLKKAHE 427

Query: 168 RYTN---------------------SPYVKGAR------FYVTVGRNQLAAKEVEIGR-- 198
                                    S Y + A         V   R +L  +++      
Sbjct: 428 LNPKDVGILTSIAWEYYSLEDYAKASEYAEKAAEISADDESVKYIREKLENQKLPEAEQI 487

Query: 199 ---------YYLKRGEYVAAIPRFQ 214
                    YY K   + A    F+
Sbjct: 488 VEFVKNNYLYYDKIANFEALANEFK 512


>gi|209965093|ref|YP_002298008.1| hypothetical protein RC1_1798 [Rhodospirillum centenum SW]
 gi|209958559|gb|ACI99195.1| conserved hypothetical protein [Rhodospirillum centenum SW]
          Length = 318

 Score = 43.6 bits (102), Expect = 0.034,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 48/134 (35%), Gaps = 12/134 (8%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY-QQAAS 115
            +E Y+ A    ++ +++ A   F Q     P   +A  +        Y   KY + A +
Sbjct: 193 AQEQYDYAFNLTRQGDYAGAERAFTQFLAQHPTHQLAPNAQYWLGETLYVRNKYKESARA 252

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
             E Y  +YP+S         + M+   + +         +     + ++   + ++P  
Sbjct: 253 FAEGY-KKYPKSNKAPDSLLKLAMALGNLNQR--------EDACLALDQLRTDFKDAP-- 301

Query: 176 KGARFYVTVGRNQL 189
              +      RN+L
Sbjct: 302 GTIQRRAEQERNRL 315



 Score = 36.2 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 11/108 (10%), Positives = 36/108 (33%), Gaps = 14/108 (12%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           Q       +  ++ + ++        A++++           + +      R +Y  +  
Sbjct: 206 QGDYAGAERAFTQFLAQHPTHQLAPNAQYWLGET--------LYV------RNKYKESAR 251

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            F      Y  +  A +++ +L  A   L   ++A   +  ++  +  
Sbjct: 252 AFAEGYKKYPKSNKAPDSLLKLAMALGNLNQREDACLALDQLRTDFKD 299


>gi|159043334|ref|YP_001532128.1| tetratricopeptide repeat-containing protein [Dinoroseobacter shibae
           DFL 12]
 gi|157911094|gb|ABV92527.1| tetratricopeptide TPR_2 repeat protein [Dinoroseobacter shibae DFL
           12]
          Length = 188

 Score = 43.6 bits (102), Expect = 0.034,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 29/81 (35%), Gaps = 9/81 (11%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG--VARKSLLMSAFVQYS 106
           S +       + ++    ++ QN+  A E+    +   P FA    AR      A   + 
Sbjct: 61  SQSGSPAADLLLDRGRDAMEAQNYDAAIEHLTALTDHAPDFAEGWYAR------ATAYFL 114

Query: 107 AGKYQQAASLGEEYITQYPES 127
           A  Y  A S     +T  P+ 
Sbjct: 115 ADLYGPALSDLARALTLNPQH 135


>gi|20091650|ref|NP_617725.1| hypothetical protein MA2826 [Methanosarcina acetivorans C2A]
 gi|19916818|gb|AAM06205.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
          Length = 1121

 Score = 43.6 bits (102), Expect = 0.034,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 38/112 (33%), Gaps = 14/112 (12%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y +      + +F  A   ++Q     P    A        F      +YQ+A +  ++
Sbjct: 849 MYRQGKALEAKGDFEAAIACYDQILTLDPKNIDAIN---NKGFAYAKMERYQEAIASYDK 905

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            I   P +      +Y  G +   +  ++          ++   ++V+   +
Sbjct: 906 AIEYAPNNAA---AWYFKGCANFAISSNI--------AAVECFDKVVQLKPD 946



 Score = 35.9 bits (82), Expect = 6.5,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 12/97 (12%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGK 109
           D  Y +  + K     K   +  A + F++      ++  A   +      AF     G 
Sbjct: 466 DSGYAKVWHRKGYDSSKLGQYKDAAKSFDKAVNLDENYTLAWYGK------AFALSKTGD 519

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
           Y++A +  E+ +   P+S  +   +Y  G+   Q+ R
Sbjct: 520 YEEALACYEKVLAAAPDSAEI---WYNKGLLLDQLER 553


>gi|332674077|gb|AEE70894.1| paralysed flagella protein [Helicobacter pylori 83]
          Length = 803

 Score = 43.6 bits (102), Expect = 0.034,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 50/137 (36%), Gaps = 9/137 (6%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             +T   Y    Y +A   +  Q +  A    ++  +++P     +   L+        G
Sbjct: 188 PLLTTKGYDLNAYLEAKKQINSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIALGQLG 247

Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            K      +G ++I  YP   ++  V Y V  +  +            K  ++Y  RI+ 
Sbjct: 248 IKKSLLIDIGTKWIKNYPTDPSIPEVLYYVAKALDEN--------NNYKQAMRYYKRILL 299

Query: 168 RYTNSPYVKGARFYVTV 184
            Y +S Y   A+  + +
Sbjct: 300 EYKDSRYAPLAQMRLAI 316



 Score = 42.0 bits (98), Expect = 0.079,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 31/99 (31%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
             + RA   +    ++   + L I     +                +  TD      +Y 
Sbjct: 217 RTISRAFKNYPQTIFKKDLYLLEIIALGQLGIKKSLLIDIGTKWIKNYPTDPSIPEVLYY 276

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
            A    +  N+ +A  Y+ +   ++  +  A  + +  A
Sbjct: 277 VAKALDENNNYKQAMRYYKRILLEYKDSRYAPLAQMRLA 315


>gi|325119602|emb|CBZ55155.1| Serine/threonine protein phosphatase 5, related [Neospora caninum
           Liverpool]
          Length = 598

 Score = 43.6 bits (102), Expect = 0.034,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 50/180 (27%), Gaps = 41/180 (22%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVAR-----KSLL-MSAFVQYS 106
           V    ++  +   F K + F +A E +             A+     + LL   AF Q +
Sbjct: 108 VAEAEKLKAEGNEFFKTRLFHQAVEKYTAAIDLICDNTMTAQTKQILQVLLCNRAFCQIN 167

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
              Y  A    E  I   P        YY  G +Y  + R         K   +   R++
Sbjct: 168 LENYGSAVVDAERVIQLNPLFAK---AYYRRGCAYCCLSR--------YKKAQKDFERVI 216

Query: 167 ERY--TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP-----RFQLVLAN 219
                 +          +   + Q+            +   + AAI      R    +  
Sbjct: 217 ALSTTPD----PSVVSRLQECKKQI------------RLEAFAAAIETEKTMRASEAVRK 260


>gi|154151489|ref|YP_001405107.1| putative PAS/PAC sensor protein [Candidatus Methanoregula boonei
           6A8]
 gi|154000041|gb|ABS56464.1| putative PAS/PAC sensor protein [Methanoregula boonei 6A8]
          Length = 461

 Score = 43.6 bits (102), Expect = 0.034,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 54/147 (36%), Gaps = 19/147 (12%)

Query: 61  YEKAVLFL-KEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           Y++ V+   + +N+  A E F    +     P      + + + A      G Y +A   
Sbjct: 309 YKEGVVLYARNRNYRGAIEAFERAIEIDPKLP-HVWNDRGICIRA-----LGDYDEALKS 362

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
               +   P++  +    Y +G +  + +  +  + R  +  ++    +V    N+    
Sbjct: 363 FLRAVELSPQNPEI---LYELGET-LEQMGVMQMNNRYIEAAVETFKMVVNSLPNNM--- 415

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKR 203
            +  ++ +   +L   E    ++Y  R
Sbjct: 416 DSWNHIGICLKELGKPEES--KFYFDR 440


>gi|153802361|ref|ZP_01956947.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|124122080|gb|EAY40823.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
          Length = 634

 Score = 43.6 bits (102), Expect = 0.034,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 42/115 (36%), Gaps = 10/115 (8%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
           F+L + F +++     W    S  +  D      +  E Y +A    ++  +  A  Y+ 
Sbjct: 323 FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMHMFNNEQYAQAAEAFRDPRWQGAARYYA 379

Query: 82  QCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           +          ++ +          A     AG+ Q+A  L E+ + Q P  ++ 
Sbjct: 380 K-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLYEQVLKQEPNHQDA 433


>gi|332290875|ref|YP_004429484.1| Tetratricopeptide TPR_1 repeat-containing protein [Krokinobacter
           diaphorus 4H-3-7-5]
 gi|332168961|gb|AEE18216.1| Tetratricopeptide TPR_1 repeat-containing protein [Krokinobacter
           diaphorus 4H-3-7-5]
          Length = 462

 Score = 43.2 bits (101), Expect = 0.035,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 79/242 (32%), Gaps = 48/242 (19%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           KA LF+ E  F KA     +     P      +  +  A +      +++A  L E+ I 
Sbjct: 69  KAELFIFENKFDKADAILTELHLLDP---HNEEVYIQKANIYSKQDDHEKAIHLLEQAID 125

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPY-----------DQRAT---------------K 156
               + +   VY L+GM Y  +                 DQ  +               +
Sbjct: 126 L---TDDPADVYSLIGMEYLFLEDFQNAKLNFMKCLEVDDQDYSALYNVIYCFDFLEEHE 182

Query: 157 LMLQYMSRIVERYTNSPYVK-GARFYVTVGRN---QLAAKEVEIG---RY---YLKRGEY 206
             + Y++  ++                   +N    L++ E  I    R+   YL++G+ 
Sbjct: 183 GAIDYLNMFLDNNPYCEVAWHQIGKQYFGLKNYEKALSSYEFAIISDDRFVGAYLEKGKV 242

Query: 207 VAAIPRFQLVLANYSDAEHAEE----AMARLVEAYVALALMDEAREVVSLIQERYP--QG 260
           +  + R+   L NY      E+    A+ R+ + Y  L   + A +         P    
Sbjct: 243 LEKLGRYNEALENYQITLELEDPTSFALLRMGKCYDKLGSDELAIKHFERCVHEDPLLDN 302

Query: 261 YW 262
            W
Sbjct: 303 GW 304


>gi|186684910|ref|YP_001868106.1| hypothetical protein Npun_R4816 [Nostoc punctiforme PCC 73102]
 gi|186467362|gb|ACC83163.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102]
          Length = 226

 Score = 43.2 bits (101), Expect = 0.035,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 42/126 (33%), Gaps = 11/126 (8%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
            Y+   F  ++       F V    Q+     L +       +++ E+    +   ++S 
Sbjct: 1   MYKPTSFVFSVVLLGCFAFTVPSVAQA---QVLVAQAKNPQLKQLLEEGRRLVDSGDYSG 57

Query: 76  AYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
           A   + Q +   P     + + +     ++    G YQ A +     I   P + +  Y 
Sbjct: 58  AIAVYQQAASLDP-----KNAKIHSGIGYLYAQQGNYQAALTSYRRAIAINPNNSDFYYA 112

Query: 134 Y-YLVG 138
             Y+  
Sbjct: 113 VGYIKA 118


>gi|116620339|ref|YP_822495.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116223501|gb|ABJ82210.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 761

 Score = 43.2 bits (101), Expect = 0.035,   Method: Composition-based stats.
 Identities = 27/220 (12%), Positives = 61/220 (27%), Gaps = 35/220 (15%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
             L+   +    RE+       L+  ++  A E   +    +P +    +  L+     +
Sbjct: 534 EELNRHPEADSVREL--LGETSLESGHYDVAIEQAGRLLSKYPDSA---RLHLLVGKAYF 588

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
             G    A    +      P          +  ++    +      Q      ++    +
Sbjct: 589 RKGDLAGATRAYQRASVLRPSDPAA-----VNALASTYAV------QGQASQAMEAYRHV 637

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           ++   +               N LA     I       G    A+     V+  + +   
Sbjct: 638 LKLNPDD----------WGAMNNLA---FLIAE---NNGSLDEALSLSSRVIRKFPNVPD 681

Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
             + +  +   YV   + D A  +   +  + PQ    RY
Sbjct: 682 FNDTLGWI---YVKKGMSDSAIPMFRKLARQDPQNATYRY 718


>gi|195146812|ref|XP_002014378.1| GL19161 [Drosophila persimilis]
 gi|194106331|gb|EDW28374.1| GL19161 [Drosophila persimilis]
          Length = 1139

 Score = 43.2 bits (101), Expect = 0.035,   Method: Composition-based stats.
 Identities = 17/162 (10%), Positives = 45/162 (27%), Gaps = 47/162 (29%)

Query: 109 KYQQAASLGEEYITQYP-----ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           +Y +A S  ++Y+           + +    Y +G++Y ++        R  K  ++   
Sbjct: 119 EYSEALSAYQKYLRFNQNNYWTNHEFI----YGIGIAYFKL--------RCFKWAIKSFQ 166

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAK--------------------EVEI----GRY 199
            ++    N          +                              E+ +       
Sbjct: 167 ELLYLNPNFTCANDVHLRLGFMLKHCGEYHIALKHLQLALLYTNPSTYSELHVKFQIAHL 226

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
           Y  + ++ AA   ++ +L           ++    + Y  L 
Sbjct: 227 YEVQNKHKAAKKAYEFLLNE------KNISLKLKADVYRQLG 262


>gi|325128502|gb|EGC51380.1| putative lipoprotein [Neisseria meningitidis N1568]
          Length = 238

 Score = 43.2 bits (101), Expect = 0.035,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 43/125 (34%), Gaps = 11/125 (8%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S   V   + +Y +A+   K   FS A               +A++S+ +    +   G 
Sbjct: 112 SAHTVETAQNLYNQALKHYKSGRFSAAASLLKGADGGD-GGSIAQRSMYLLLQSRARMGN 170

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVER 168
            +    +G  Y  ++ +S       + +G    +   +D+                +++ 
Sbjct: 171 CESVIEIGGRYANRFKDSPTAPEAIFKIGECQYRLQQKDIAR---------ATWRSLIQA 221

Query: 169 YTNSP 173
           Y +SP
Sbjct: 222 YPSSP 226


>gi|301165622|emb|CBW25193.1| putative exported protein [Bacteriovorax marinus SJ]
          Length = 963

 Score = 43.2 bits (101), Expect = 0.035,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 67/192 (34%), Gaps = 28/192 (14%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           A ++  +  + +A   +    R+  F      K  +  A+  Y  GK + A  L  E   
Sbjct: 173 AEIYFNQGQYKQAIPLYENAFRNKKFRDKWYTKDSVNLAWSYYRVGKTKSAIRLMREAYK 232

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
              +S N           Y  M   +  D       L Y       YT+S  V  A  + 
Sbjct: 233 L-SKSPN-----------YVDMSFSIERD-------LAYF------YTDSGRVNEAVQFY 267

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE-EAMARLVEAYVALA 241
                 +A+  +++  Y + RG+Y  A    +  L NY  +E  + E   +L+  Y    
Sbjct: 268 KSIGKNIASNLLKVSTYLMNRGKYSPAEKTLKQAL-NYKVSEQEDIEINIKLLSLYERFG 326

Query: 242 LMDEAREVVSLI 253
                ++V   +
Sbjct: 327 KYHNHQKVAKTL 338


>gi|224369488|ref|YP_002603652.1| AmiC [Desulfobacterium autotrophicum HRM2]
 gi|223692205|gb|ACN15488.1| AmiC [Desulfobacterium autotrophicum HRM2]
          Length = 568

 Score = 43.2 bits (101), Expect = 0.036,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 7/76 (9%)

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL-------ALMDEAREVVSLIQE 255
           R  +V  I  +Q V +++ ++  A   M R  + Y+ L           EA ++++ IQ 
Sbjct: 54  RKAWVNCIASYQRVYSDHPESPWAAAGMYRSAQLYLDLSQRSSNKNDKTEAVDLLNRIQG 113

Query: 256 RYPQGYWARYVETLVK 271
            YP+  +      L+K
Sbjct: 114 HYPKSAYKDKAVHLLK 129



 Score = 39.3 bits (91), Expect = 0.64,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 27/80 (33%), Gaps = 1/80 (1%)

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
            +  +   + +PES       Y     Y  + +        T   +  ++RI   Y  S 
Sbjct: 61  IASYQRVYSDHPESPWAAAGMYRSAQLYLDLSQRSSNKNDKT-EAVDLLNRIQGHYPKSA 119

Query: 174 YVKGARFYVTVGRNQLAAKE 193
           Y   A   + +   Q + KE
Sbjct: 120 YKDKAVHLLKLIAVQESKKE 139


>gi|158337770|ref|YP_001518946.1| hypothetical protein AM1_4653 [Acaryochloris marina MBIC11017]
 gi|158308011|gb|ABW29628.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
          Length = 826

 Score = 43.2 bits (101), Expect = 0.036,   Method: Composition-based stats.
 Identities = 7/66 (10%), Positives = 20/66 (30%), Gaps = 11/66 (16%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
            A  +  A +  ++ +   P        +Y  G+    + R         +  +    + 
Sbjct: 133 KAKDFDAALAAYDKVLAFKPNH---AQAWYQRGLVLFNLQRS--------EDAIASFDQA 181

Query: 166 VERYTN 171
           +E   +
Sbjct: 182 LEHQPD 187


>gi|150015089|ref|YP_001307343.1| TPR repeat-containing protein [Clostridium beijerinckii NCIMB 8052]
 gi|149901554|gb|ABR32387.1| Tetratricopeptide TPR_2 repeat protein [Clostridium beijerinckii
           NCIMB 8052]
          Length = 421

 Score = 43.2 bits (101), Expect = 0.036,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 40/123 (32%), Gaps = 9/123 (7%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YE  +    E  +S A  + ++         +    L   A           A    EEY
Sbjct: 306 YENGLKSFNENKYSDAKVFLDKAYAYCEGNSLKEHILFYRASSSSKLSDNSAAVKQYEEY 365

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
            +QYP    V+   Y + +  + + +D            QY S ++  Y +S Y      
Sbjct: 366 YSQYPNGVYVEEALYNLALLNSSINKD---------KSKQYASILINNYPDSMYANNNIK 416

Query: 181 YVT 183
            + 
Sbjct: 417 NII 419



 Score = 42.8 bits (100), Expect = 0.057,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 53/132 (40%), Gaps = 20/132 (15%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR-----NQLAAKEVEI 196
            +   D+  DQ  ++    +    ++ +  + Y   A+ ++         N L    +  
Sbjct: 290 YKQAVDLIKDQGVSR----FYENGLKSFNENKYS-DAKVFLDKAYAYCEGNSLKEHIL-- 342

Query: 197 GRYY-----LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
             +Y      K  +  AA+ +++   + Y +  + EEA+  L     ++   D++++  S
Sbjct: 343 --FYRASSSSKLSDNSAAVKQYEEYYSQYPNGVYVEEALYNLALLNSSIN-KDKSKQYAS 399

Query: 252 LIQERYPQGYWA 263
           ++   YP   +A
Sbjct: 400 ILINNYPDSMYA 411


>gi|317182523|dbj|BAJ60307.1| paralysed flagella protein [Helicobacter pylori F57]
          Length = 804

 Score = 43.2 bits (101), Expect = 0.036,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 49/137 (35%), Gaps = 9/137 (6%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             +T   Y    Y +A   +  Q +  A    ++  +++P     +   L+        G
Sbjct: 189 PLLTTKGYDLNAYLEAKKQINSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIALGQLG 248

Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            K      +G ++I  YP   ++  V Y V  +  +            K  + Y  RI+ 
Sbjct: 249 IKKSLLIDIGTKWIKNYPTDPSIPEVLYYVAKALDEN--------NNYKQAMHYYKRILL 300

Query: 168 RYTNSPYVKGARFYVTV 184
            Y +S Y   A+  + +
Sbjct: 301 EYKDSRYAPLAQMRLAI 317



 Score = 40.9 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 31/99 (31%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
             + RA   +    ++   + L I     +                +  TD      +Y 
Sbjct: 218 RTISRAFKNYPQTIFKKDLYLLEIIALGQLGIKKSLLIDIGTKWIKNYPTDPSIPEVLYY 277

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
            A    +  N+ +A  Y+ +   ++  +  A  + +  A
Sbjct: 278 VAKALDENNNYKQAMHYYKRILLEYKDSRYAPLAQMRLA 316


>gi|304387176|ref|ZP_07369419.1| probable periplasmic protein [Neisseria meningitidis ATCC 13091]
 gi|304338743|gb|EFM04854.1| probable periplasmic protein [Neisseria meningitidis ATCC 13091]
          Length = 238

 Score = 43.2 bits (101), Expect = 0.036,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 43/125 (34%), Gaps = 11/125 (8%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S   V   + +Y +A+   K   FS A               +A++S+ +    +   G 
Sbjct: 112 SAHTVETAQNLYNQALKHYKSGRFSAAASLLKGADGGD-GGSIAQRSMYLLLQSRARMGN 170

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVER 168
            +    +G  Y  ++ +S       + +G    +   +D+                +++ 
Sbjct: 171 CESVIEIGGRYANRFKDSPTAPEAIFKIGECQYRLQQKDIAR---------ATWRSLIQA 221

Query: 169 YTNSP 173
           Y +SP
Sbjct: 222 YPSSP 226


>gi|193580212|ref|XP_001944071.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog
           [Acyrthosiphon pisum]
          Length = 1173

 Score = 43.2 bits (101), Expect = 0.036,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 63/155 (40%), Gaps = 24/155 (15%)

Query: 118 EEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPY--DQ--RATKLMLQYMSRIVERYTN 171
           +++      P + N  Y    +G  + Q +       DQ  R   L LQ+ +++++    
Sbjct: 585 KKFERVLKNPSTLNDPYSLIALGNVWLQTLHQPTRNKDQEKRHQDLALQFYTKVLKYDPR 644

Query: 172 SPYVKG------ARFY-VTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQ 214
           + +         A  + +   R+  +  +E         + I   Y+++ +Y++AI  ++
Sbjct: 645 NIWAANGIGCVLAYKHCINEARDIFSQVREATSDFCDVWLNIAHIYVEQKQYISAIQMYE 704

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
             +  +   ++  E +  L  AY    ++ EA+ V
Sbjct: 705 SCIKKFFKHDNV-EVLQYLGRAYFRAGMLKEAKRV 738


>gi|118579739|ref|YP_900989.1| lytic transglycosylase catalytic subunit [Pelobacter propionicus
           DSM 2379]
 gi|118502449|gb|ABK98931.1| Lytic transglycosylase, catalytic [Pelobacter propionicus DSM 2379]
          Length = 721

 Score = 43.2 bits (101), Expect = 0.036,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 35/83 (42%), Gaps = 6/83 (7%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS---LLMSAFVQYSAGKYQQAASLG 117
           Y +A    K + + +A        +++P + + R+S    L S      AG +  A  L 
Sbjct: 122 YYQAEALFKLKRYPEAAAKAVAIPKEYPVSLLVRRSLKLQLDSVVA---AGDFAAALKLS 178

Query: 118 EEYITQYPESKNVDYVYYLVGMS 140
           + ++ +YP   +     +L G+ 
Sbjct: 179 QAFVEKYPSGADSVDALFLSGLC 201


>gi|229527850|ref|ZP_04417241.1| TPR domain protein in aerotolerance operon [Vibrio cholerae
           12129(1)]
 gi|229334212|gb|EEN99697.1| TPR domain protein in aerotolerance operon [Vibrio cholerae
           12129(1)]
          Length = 620

 Score = 43.2 bits (101), Expect = 0.037,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 42/115 (36%), Gaps = 10/115 (8%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
           F+L + F +++     W    S  +  D      +  E Y +A    ++  +  A  Y+ 
Sbjct: 323 FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMHMFNNEQYAQAAEAFRDPRWQGAARYYA 379

Query: 82  QCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           +          ++ +          A     AG+ Q+A  L E+ + Q P  ++ 
Sbjct: 380 K-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLYEQVLKQEPNHQDA 433


>gi|82701510|ref|YP_411076.1| tetratricopeptide TPR_4 [Nitrosospira multiformis ATCC 25196]
 gi|82409575|gb|ABB73684.1| Tetratricopeptide TPR_4 [Nitrosospira multiformis ATCC 25196]
          Length = 929

 Score = 43.2 bits (101), Expect = 0.037,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 86/224 (38%), Gaps = 32/224 (14%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE-KAVLFLKEQNFSKAYEYFNQCSRDF 87
            +A   L   E + + D+    + +V+   +++      +++ ++F+KA EYF   S   
Sbjct: 345 LLASALLKNGETKRAIDILTPPLKNVKEDPQLFALAGEAYMQAKDFAKATEYFEMASDIA 404

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
           P + +   +L M    +   G+  +A S  E      P+S        L+ M++ ++   
Sbjct: 405 PRSAMLHTALSM---SRLGQGENARAISELETATKLDPKSPRAGV---LLVMTHLRL--- 455

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA------AKEVEIGRYYL 201
                +     L  +  + +   ++P ++  +  V +G+N +A       K + I   Y 
Sbjct: 456 -----KEFDKALAAVKALEKENPDNPLIQNLKGGVYLGKNDIANARASFEKALAIQPNYF 510

Query: 202 KR-----------GEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
                         +  AA  RF+ +L        A  A+A L 
Sbjct: 511 PTIANLARLDIQDKKPDAARKRFEAILEKDKKNIQAMVALAGLA 554


>gi|73544347|ref|XP_848068.1| intraflagellar transport protein IFT88 [Leishmania major strain
           Friedlin]
 gi|321438422|emb|CBZ12177.1| putative intraflagellar transport protein IFT88 [Leishmania major
           strain Friedlin]
          Length = 811

 Score = 43.2 bits (101), Expect = 0.037,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 63/219 (28%), Gaps = 48/219 (21%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY-- 110
           +      +Y   +   K   + +A   F +            ++L+ S+ V Y       
Sbjct: 507 EADNVEAIYNLGLAAKKLGLYEEAVRMFKRV-----------QALVDSSEVLYQIADLSD 555

Query: 111 ----QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
                 A       I + P   N       +G  YA+   DV            Y     
Sbjct: 556 LVGDPAALEWFNRLIGRVPTDPN---ALARIGSLYARDSDDV--------QAFHYYLEAY 604

Query: 167 ERY--------------TNSPYVKGARF---YVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
             Y                +     A       +  + Q    ++ +   + +RG+YV A
Sbjct: 605 RYYQVNMDVISWLGAYFVKNEVYDKAVQFFERASHIQPQEVKWQLMVASCHRRRGDYVQA 664

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
              ++ V   Y D     E +  LV+      L +EA E
Sbjct: 665 KRLYEQVHRRYPD---NIECLNYLVQLCKDAGLNEEANE 700



 Score = 36.2 bits (83), Expect = 5.2,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 69/208 (33%), Gaps = 43/208 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFN---QCSR-----DFPFAGVARKSLLMSAFV-------QYS 106
           E A+L L+ +++  A E      +  R        +  +A +  +   +        QY 
Sbjct: 144 ESAMLALQ-KDYGAALEKAKDAGKLERSLCKKREQYG-LAEQINVDLTYAVHFNLAVQYQ 201

Query: 107 AGK-YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
             + Y +A +     I           V +         + ++   Q+   L ++   ++
Sbjct: 202 NHQLYTEALNTYNLIIRN---------VQFPQAGRLRVNMGNIYLAQQNYLLAIKMYRKV 252

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           ++         G  F   + RN        I   ++K G+Y  A   ++ V+    D   
Sbjct: 253 LDETP----AAGKEFRYHLCRN--------IANAFVKLGQYRDAANSYETVVEGNGDVNA 300

Query: 226 AEEAMARLVEAYVALALMDEAREVVSLI 253
                  L+  Y AL   ++ +   + +
Sbjct: 301 T----FNLILCYYALGETEKMKRTFTRL 324


>gi|320162434|ref|YP_004175659.1| hypothetical protein ANT_30330 [Anaerolinea thermophila UNI-1]
 gi|319996288|dbj|BAJ65059.1| hypothetical protein ANT_30330 [Anaerolinea thermophila UNI-1]
          Length = 778

 Score = 43.2 bits (101), Expect = 0.037,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 67/191 (35%), Gaps = 21/191 (10%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           ++   +      +Q++ KA +Y+ Q   + P + +A  S        +  G+Y++A    
Sbjct: 9   QQAMNQGHSAAWDQDWVKAAQYYAQALDEMPDSPLALSS---LGLAYFELGEYERALECY 65

Query: 118 EEYITQYPESKNVDY-----VYYLVG---------MSYAQMIRDVPYDQRATKLMLQYMS 163
           +      P    V Y     +Y  +G         +  A++        +A +  +  +S
Sbjct: 66  QRASKIAPTDP-VPYEKLTRIYERMGKLKEASEVCLQAAELHLRARDVDKAIEDWVHVLS 124

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEV-EIGRYYLKRGEYVAAIPRFQLVLANYSD 222
              E       +      +  GR   A  E   I   + + G+   A+   +  L    +
Sbjct: 125 LFPEHLPTRQRLAAVYERM--GRKMEAINEYVAIASLFQRTGDMTRALKSVEYALRLMPE 182

Query: 223 AEHAEEAMARL 233
           ++ A  A+  L
Sbjct: 183 SQEARFALHML 193


>gi|255693876|ref|ZP_05417551.1| aerotolerance-related exported protein [Bacteroides finegoldii DSM
           17565]
 gi|260620305|gb|EEX43176.1| aerotolerance-related exported protein [Bacteroides finegoldii DSM
           17565]
          Length = 278

 Score = 43.2 bits (101), Expect = 0.037,   Method: Composition-based stats.
 Identities = 15/122 (12%), Positives = 38/122 (31%), Gaps = 14/122 (11%)

Query: 19  LYKFALTIFFSIAV-CFLVGWERQSSR-----DVYLDSVTDVRYQREVYE----KAVLFL 68
           + K    I   I++ CF        S+     D    + T +     +      +     
Sbjct: 1   MKKILFFILTLISITCFGQDSLNVDSKQVNEGDSIHAASTTMFSNNTLANVTKTEGDSAY 60

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
            +++++ A + +    ++      A           Y  G+  +A    E  +   P + 
Sbjct: 61  IKEDYTAAIQIYEALLKN---GEAAE-VYYNLGNSYYKIGEIAKAVLNYERALLLQPGNS 116

Query: 129 NV 130
           ++
Sbjct: 117 DI 118


>gi|156548833|ref|XP_001605529.1| PREDICTED: hypothetical protein [Nasonia vitripennis]
          Length = 558

 Score = 43.2 bits (101), Expect = 0.037,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 82/205 (40%), Gaps = 22/205 (10%)

Query: 65  VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
             FL  ++++ A           P +   + S L  A+  +  G Y++AA + E  + + 
Sbjct: 31  EEFLSRRDYTGALTLLEFNETANPASS-NKDSRLWIAYCSFHLGDYRKAADIYEV-LRKS 88

Query: 125 PESKNVD----YV---YYLVGM--SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
            + K+      YV   Y+ +GM     +++ D P  Q  T+L+L    ++ ++       
Sbjct: 89  ADGKDAPELGTYVACCYFYLGMYPESQKILADAPDSQLKTRLLLHLAYKLSDK------- 141

Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
                Y    R+ +A  ++ +   +  R  Y  AI  ++ VL    +          +  
Sbjct: 142 TQLEEYEEKLRD-IAEDQLCLASVHYLRAHYQEAIDIYKKVLLENREYLALN---VYVAL 197

Query: 236 AYVALALMDEAREVVSLIQERYPQG 260
            Y  L   D A++V+ +  ++YP  
Sbjct: 198 CYYKLDYYDVAQDVLQVYLQKYPDS 222


>gi|91792754|ref|YP_562405.1| tetratricopeptide TPR_2 [Shewanella denitrificans OS217]
 gi|91714756|gb|ABE54682.1| Tetratricopeptide TPR_2 [Shewanella denitrificans OS217]
          Length = 261

 Score = 43.2 bits (101), Expect = 0.037,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 58/149 (38%), Gaps = 9/149 (6%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
              S+  V  +S+T    +   YE+AV   LKE+ +  A   F +  + +P +  A  + 
Sbjct: 120 NTASNVPVVAESMTSSLDETGSYERAVNLVLKERQYDAAIPAFREFIKQYPDSAYAPNAN 179

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
                + Y+   Y+ A       +++Y +S         +GM   +   +          
Sbjct: 180 YWLGQLLYNKSDYESAKQAFSTVVSKYADSSKRADSLVKLGMIAEKSNDNNG-------- 231

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGR 186
                +++++ Y NS   + A+  ++  +
Sbjct: 232 ARALYNKVLKEYANSASARLAQQQLSALK 260



 Score = 39.7 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 2/71 (2%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           LK  +Y AAIP F+  +  Y D+ +A  A   L +     +  + A++  S +  +Y   
Sbjct: 150 LKERQYDAAIPAFREFIKQYPDSAYAPNANYWLGQLLYNKSDYESAKQAFSTVVSKYADS 209

Query: 261 YWARYVETLVK 271
              +  ++LVK
Sbjct: 210 S--KRADSLVK 218


>gi|146276616|ref|YP_001166775.1| hypothetical protein Rsph17025_0564 [Rhodobacter sphaeroides ATCC
           17025]
 gi|145554857|gb|ABP69470.1| conserved hypothetical protein [Rhodobacter sphaeroides ATCC 17025]
          Length = 274

 Score = 43.2 bits (101), Expect = 0.037,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 40/126 (31%), Gaps = 10/126 (7%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ-QAASLGEE 119
           +++A   L + +F  A + F   +  +    +  ++  +        G+    A +  E 
Sbjct: 155 FDRAQEVLGQGDFRSAADLFKAFAETYTGGQLTYEAHYLRGEALRQLGETANAARAYLES 214

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           +    P+          +G +          D R T      ++ +  R+  SP    A 
Sbjct: 215 FSGD-PDGPRAPEALLKLGRALG--------DLRQTPEACVTLAEVGTRFPGSPSAAEAA 265

Query: 180 FYVTVG 185
             +   
Sbjct: 266 TAMQGL 271



 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 30/113 (26%), Gaps = 20/113 (17%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           Q   +          E YT       A +       QL                      
Sbjct: 164 QGDFRSAADLFKAFAETYTGGQLTYEAHYLRGEALRQLGE-----------------TAN 206

Query: 212 RFQLVLANY---SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             +  L ++    D   A EA+ +L  A   L    EA   ++ +  R+P   
Sbjct: 207 AARAYLESFSGDPDGPRAPEALLKLGRALGDLRQTPEACVTLAEVGTRFPGSP 259


>gi|237746995|ref|ZP_04577475.1| N-acetylglucosaminyl transferase [Oxalobacter formigenes HOxBLS]
 gi|229378346|gb|EEO28437.1| N-acetylglucosaminyl transferase [Oxalobacter formigenes HOxBLS]
          Length = 391

 Score = 43.2 bits (101), Expect = 0.037,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 5/71 (7%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
            D   + R Q + YE    FLK     +A E F + +   P++  AR++LL         
Sbjct: 100 PDLPPEQRMQAQ-YELGQDFLKAGLLDRAEEVFQELTET-PYSIQARRALLEI---FQRE 154

Query: 108 GKYQQAASLGE 118
            +++QA    +
Sbjct: 155 KEWEQAIDAAK 165


>gi|218437704|ref|YP_002376033.1| hypothetical protein PCC7424_0709 [Cyanothece sp. PCC 7424]
 gi|218170432|gb|ACK69165.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7424]
          Length = 864

 Score = 43.2 bits (101), Expect = 0.037,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 57/154 (37%), Gaps = 33/154 (21%)

Query: 105 YSAGKYQQAASLGEEY---ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           + A          E+Y   +T  P + ++   YY +G+ Y Q        QR  +   Q 
Sbjct: 266 HQARNLSITQGAIEKYREALTWNPYNPDI---YYELGVIYYQ--------QRELEEASQL 314

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
           + + +E              +   +   +     +G  Y ++ ++  AI  ++  +  + 
Sbjct: 315 LKKAIE--------------LDFLK---SQYHYLLGIIYFEQEQWEEAINVYKRAIEAFP 357

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
             +  +E +         L L+D+  + + ++++
Sbjct: 358 --KQDKEYLKIYSMLIRILGLIDQREKAIKVVEQ 389



 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 34/98 (34%), Gaps = 14/98 (14%)

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
             A E + +     P+             + Y   + ++A+ L ++ I    +     Y 
Sbjct: 275 QGAIEKYREALTWNPYNP---DIYYELGVIYYQQRELEEASQLLKKAIEL--DFLKSQY- 328

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           +YL+G+ Y +        Q   +  +    R +E +  
Sbjct: 329 HYLLGIIYFE--------QEQWEEAINVYKRAIEAFPK 358


>gi|110679116|ref|YP_682123.1| TPR domain-containing protein [Roseobacter denitrificans OCh 114]
 gi|109455232|gb|ABG31437.1| TPR-domain containing protein [Roseobacter denitrificans OCh 114]
          Length = 196

 Score = 43.2 bits (101), Expect = 0.037,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 48/126 (38%), Gaps = 18/126 (14%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLG 117
           + ++    L++++ ++A E+ +  +   P FA     ++        Y AG Y  A    
Sbjct: 79  LLKRGREALEDEDNARAVEHLSALTDHAPEFAEGWHARAT-----ALYRAGLYGPALDAL 133

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
            + +   P + N     + +G+   +   D+           +   R++E + +    K 
Sbjct: 134 HQALLLNPNNFN---AIFGLGV-MMREFGDLDR-------AARAFDRVLELHPHHKRAKA 182

Query: 178 ARFYVT 183
           A+  + 
Sbjct: 183 AKEQMA 188


>gi|149372385|ref|ZP_01891573.1| hypothetical protein SCB49_01247 [unidentified eubacterium SCB49]
 gi|149354775|gb|EDM43338.1| hypothetical protein SCB49_01247 [unidentified eubacterium SCB49]
          Length = 987

 Score = 43.2 bits (101), Expect = 0.037,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 66/222 (29%), Gaps = 45/222 (20%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A    K + + +A   F + +         + + L      +    Y +A     + 
Sbjct: 486 YNLAYNHFKLKQYPEAISNFKKYTTGTTETTREKDAYLRLGDSYFVTSDYWKAMENYNKA 545

Query: 121 ITQYPESKNVDYVYYLVGMSY-----------------AQMIRDVPYD------------ 151
           +     S + DY  +   +SY                 ++  +    D            
Sbjct: 546 VELN--SPDKDYAAFQKAISYGFVDRTDSKITELSAFGSKYPKSFYRDDALYELGNSYAS 603

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           Q      +    +++    NS YV  +     +  +                G+   A+ 
Sbjct: 604 QNKNNEAISAYDKLITSLPNSSYVSKSLLKKALLLDI--------------SGDSNGALT 649

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            F+ V  ++     A +A++     Y+    +DE  E V+ +
Sbjct: 650 TFKKVAKDFPSTPEAIQAVSSAKVIYIDEGRVDEYAEWVNTL 691



 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 3/75 (4%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
             V  D++     ++  +     F + + F++A +YFN+ S          ++     F+
Sbjct: 108 DKVDGDNLPPSEREKYYFNNGYAFFQNKRFNEAKKYFNRVSDS---KEYGSQAKYYLGFI 164

Query: 104 QYSAGKYQQAASLGE 118
            Y    YQ+A  L E
Sbjct: 165 AYEGDDYQEANDLFE 179



 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 42/236 (17%), Positives = 76/236 (32%), Gaps = 49/236 (20%)

Query: 51  VTDVRYQREVYEKAVLFLK-EQNF---SKAYEY------------FNQCSRDFPFAGVAR 94
            +D     E Y KAV     ++++    KA  Y             +     +P +    
Sbjct: 532 TSDYWKAMENYNKAVELNSPDKDYAAFQKAISYGFVDRTDSKITELSAFGSKYPKSFYRD 591

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
            +L        S  K  +A S  ++ IT  P S  V        +    ++ D+  D   
Sbjct: 592 DALYELGNSYASQNKNNEAISAYDKLITSLPNSSYVS-----KSLLKKALLLDISGD--- 643

Query: 155 TKLMLQYMSRIVERYTNSPYVKGA--RFYVTVG----RNQLAA------------KEVEI 196
           +   L    ++ + + ++P    A     V        ++ A              E++ 
Sbjct: 644 SNGALTTFKKVAKDFPSTPEAIQAVSSAKVIYIDEGRVDEYAEWVNTLNFVAIEDNELDD 703

Query: 197 GRY------YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
             Y      YL+      A  RF+  L ++ + +HA  A   L + Y       EA
Sbjct: 704 ATYQAAEQPYLENKT-GQATTRFEAYLNDFPNGKHALSAHFYLAQLYFIDDKKQEA 758


>gi|260779146|ref|ZP_05888038.1| TPR repeat-containing protein [Vibrio coralliilyticus ATCC BAA-450]
 gi|260605310|gb|EEX31605.1| TPR repeat-containing protein [Vibrio coralliilyticus ATCC BAA-450]
          Length = 258

 Score = 43.2 bits (101), Expect = 0.038,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 23/128 (17%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               Y  A +  +++   +P+S      +Y +G  Y    +D        K  ++  + +
Sbjct: 153 KKRDYTGAIAAFQQFQKDFPDSTFAPNAHYWLGQLYFAKKQD--------KEAVKSFASV 204

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           V  Y +S     A   +              G    +      A   +Q VL  Y D+  
Sbjct: 205 VS-YKDSNKRADALVKL--------------GDLSQRNNNAAQAKKYYQQVLDEYPDSAS 249

Query: 226 AEEAMARL 233
           A+ A  R+
Sbjct: 250 AKLAAERI 257



 Score = 42.8 bits (100), Expect = 0.050,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 48/130 (36%), Gaps = 15/130 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            Q   D+   +R     +    +  + + +S +   A +++              G+ Y 
Sbjct: 144 YQNAVDLILKKRDYTGAIAAFQQFQKDFPDSTFAPNAHYWL--------------GQLYF 189

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + +   A+  F  V+ +Y D+    +A+ +L +         +A++    + + YP   
Sbjct: 190 AKKQDKEAVKSFASVV-SYKDSNKRADALVKLGDLSQRNNNAAQAKKYYQQVLDEYPDSA 248

Query: 262 WARYVETLVK 271
            A+     +K
Sbjct: 249 SAKLAAERIK 258



 Score = 40.5 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 52/130 (40%), Gaps = 14/130 (10%)

Query: 57  QREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           ++  Y+ AV   LK+++++ A   F Q  +DFP +  A  +      + ++  + ++A  
Sbjct: 140 EQTAYQNAVDLILKKRDYTGAIAAFQQFQKDFPDSTFAPNAHYWLGQLYFAKKQDKEAV- 198

Query: 116 LGEEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
             + + +   Y +S         +G        D+           +Y  ++++ Y +S 
Sbjct: 199 --KSFASVVSYKDSNKRADALVKLG--------DLSQRNNNAAQAKKYYQQVLDEYPDSA 248

Query: 174 YVKGARFYVT 183
             K A   + 
Sbjct: 249 SAKLAAERIK 258


>gi|110834743|ref|YP_693602.1| LemA family protein [Alcanivorax borkumensis SK2]
 gi|110647854|emb|CAL17330.1| LemA family protein [Alcanivorax borkumensis SK2]
          Length = 215

 Score = 43.2 bits (101), Expect = 0.038,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 34/86 (39%), Gaps = 11/86 (12%)

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE--VEI 196
           ++  + ++     QR     LQ +  + ERY +      A       ++QL   E  + +
Sbjct: 106 LNNPEKLKQFEQAQRQLGSALQRLMVVAERYPD----LKANQNFLALQSQLEGTENRISV 161

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSD 222
                 R +Y+AA+ R+   +  +  
Sbjct: 162 A-----RRDYIAAVQRYNTEIRTFPG 182


>gi|118379597|ref|XP_001022964.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89304731|gb|EAS02719.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 2086

 Score = 43.2 bits (101), Expect = 0.038,   Method: Composition-based stats.
 Identities = 40/276 (14%), Positives = 82/276 (29%), Gaps = 83/276 (30%)

Query: 61   YEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFA--------------------------- 90
            Y+  +  L+++++  A E F +    +  F  A                           
Sbjct: 1797 YQLGLALLEKKDYKGATEEFKETIRINERFTGAYKAIGLIYYENNNPSNACKYYLRALEC 1856

Query: 91   -GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY----VYYLVG-----MS 140
                 +S L  A   Y    +  A    EE I+   ++  ++Y     YY+ G     ++
Sbjct: 1857 DPFDMESKLGLANCYYLMENFDAAIQNYEE-ISGIDQNDEIEYNLANCYYMKGEINEAIN 1915

Query: 141  YAQMIRDVPYD--------------QRATKLMLQYMSRIVERYTN--------------- 171
            + +   ++  D              Q   K  L    + ++                   
Sbjct: 1916 HYKNALNLKQDKPDCLYNLGNAYCIQENFKEALICFEKAIQYDPQNSAAMYNLANTYYVL 1975

Query: 172  ------SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
                  S Y + A   + +  N +      IG  Y  R ++  A   F+    +Y  +  
Sbjct: 1976 EDHEKASDYFEKA---IQLEPNNIEWHN-YIGGVYFGRNQFNEARRHFE---QSYKLSSD 2028

Query: 226  AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
              +   RL +   +    D A   V+ +  + P+  
Sbjct: 2029 NIDTNYRLAQLNHSEGNNDAALHYVNFVISKQPENE 2064



 Score = 35.5 bits (81), Expect = 8.6,   Method: Composition-based stats.
 Identities = 21/156 (13%), Positives = 52/156 (33%), Gaps = 30/156 (19%)

Query: 57   QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
               +Y     +  ++NF +A   F +  +  P       ++   A   Y    +++A+  
Sbjct: 1928 PDCLYNLGNAYCIQENFKEALICFEKAIQYDPQNS---AAMYNLANTYYVLEDHEKASDY 1984

Query: 117  GEEYITQYPESKNVDYVYYLVGM----------------SYAQMIRDVPYDQRATK---- 156
             E+ I   P   N+++  Y+ G+                SY     ++  + R  +    
Sbjct: 1985 FEKAIQLEPN--NIEWHNYIGGVYFGRNQFNEARRHFEQSYKLSSDNIDTNYRLAQLNHS 2042

Query: 157  -----LMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
                   L Y++ ++ +   +      +  +    N
Sbjct: 2043 EGNNDAALHYVNFVISKQPENEEANQLKREINELLN 2078


>gi|67922309|ref|ZP_00515822.1| hypothetical protein CwatDRAFT_4219 [Crocosphaera watsonii WH 8501]
 gi|67855885|gb|EAM51131.1| hypothetical protein CwatDRAFT_4219 [Crocosphaera watsonii WH 8501]
          Length = 169

 Score = 43.2 bits (101), Expect = 0.038,   Method: Composition-based stats.
 Identities = 10/67 (14%), Positives = 24/67 (35%), Gaps = 2/67 (2%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRD-FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y++    L    +  + +   +      P + +  +  L          K + A +L +E
Sbjct: 12  YQEGQALLDRGQYRSSVKTLEEAKSLVNPSSKLGGEVQLSLVTAYQGINKLEDAIALCQE 71

Query: 120 YITQYPE 126
            +T +P 
Sbjct: 72  -LTAHPN 77


>gi|194373627|dbj|BAG56909.1| unnamed protein product [Homo sapiens]
          Length = 486

 Score = 43.2 bits (101), Expect = 0.038,   Method: Composition-based stats.
 Identities = 20/149 (13%), Positives = 47/149 (31%), Gaps = 30/149 (20%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
              +   ++   E+  +A  + K +++  A ++++Q     P           + +  Y+
Sbjct: 18  EPPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS---------NAIYYGYA 68

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
            G   +A  L ++YI            YY    S   +           +  L+    +V
Sbjct: 69  LGDATRAIELDKKYIK----------GYYRRAASNMAL--------GKFRAALRDYETVV 110

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           +   +      A+         +  K  E
Sbjct: 111 KVKPHDK---DAKMKYQECNKIVKQKAFE 136


>gi|239915965|ref|NP_033402.2| intraflagellar transport protein 88 homolog [Mus musculus]
 gi|148704224|gb|EDL36171.1| intraflagellar transport 88 homolog (Chlamydomonas) [Mus musculus]
          Length = 825

 Score = 43.2 bits (101), Expect = 0.038,   Method: Composition-based stats.
 Identities = 31/240 (12%), Positives = 76/240 (31%), Gaps = 40/240 (16%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLM 99
           Q+S    L   +D      +  K        ++ KA E++      D   +     +L  
Sbjct: 469 QASSYADLAVNSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYN 524

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
                    +  +A    + ++  +   +N   V   +   Y +++ D           +
Sbjct: 525 IGLTYKKLNRLDEAL---DSFLKLHAILRNSAQVLCQIANIY-ELMEDPN-------QAI 573

Query: 160 QYMSRIVERYT-NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA-IPRFQLVL 217
           +++ +++     +S     A   +    +    K  +  +YY +   Y  + I   + + 
Sbjct: 574 EWLMQLISVVPTDSQ----ALSKLGELYDSEGDKS-QAFQYYYESYRYFPSNIEVIEWLG 628

Query: 218 ANYSDAEHAEEAMARLVEA-----------------YVALALMDEAREVVSLIQERYPQG 260
           A Y D +  E+A+     A                 +       +A +    I  ++P+ 
Sbjct: 629 AYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKEIHRKFPEN 688


>gi|19705092|ref|NP_602587.1| TPR repeat-containing protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|19713016|gb|AAL93886.1| Tetratricopeptide repeat family protein [Fusobacterium nucleatum
           subsp. nucleatum ATCC 25586]
          Length = 628

 Score = 43.2 bits (101), Expect = 0.038,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 59/195 (30%), Gaps = 37/195 (18%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVY--EKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
            C      +        D    +      Y   +   +     +S+A E +++  +  P 
Sbjct: 68  ACSYYCSNKYDKAIEDYDKAIKLNPNDACYFNNRGHSYFALNKYSEAIEDYDKAIKLDPN 127

Query: 90  --AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
             +   ++      F  Y+  KY +A     + I   P +            +Y     D
Sbjct: 128 NASYYYKR-----GFSYYALNKYDKAIEDYNKAIKLDPNNA-----------AYFSSRGD 171

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
           + Y ++A    ++  ++ ++   N+ +              LA         Y K  +Y 
Sbjct: 172 IYYYEKAYNKSIEDYNKAIKLDPNNAFYYD--------NRGLA---------YEKLKKYK 214

Query: 208 AAIPRFQLVLANYSD 222
            AI  +   +    +
Sbjct: 215 EAINDYNKAIKLNPN 229



 Score = 39.3 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 20/171 (11%), Positives = 47/171 (27%), Gaps = 42/171 (24%)

Query: 53  DVRYQREVY--EKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           +     ++Y   + + +   + + +A   +N     +   A          A   Y + K
Sbjct: 21  EKEPNNDIYYNNRGLSYFLLKKYEEAINDYNRAIELNLNNASY----YYNRACSYYCSNK 76

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y +A    ++ I   P               Y        +        ++   + ++  
Sbjct: 77  YDKAIEDYDKAIKLNPNDA-----------CYFNNRGHSYFALNKYSEAIEDYDKAIKLD 125

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
            N+                          YY KRG    A+ ++   + +Y
Sbjct: 126 PNN------------------------ASYYYKRGFSYYALNKYDKAIEDY 152


>gi|84687869|ref|ZP_01015737.1| TPR domain protein [Maritimibacter alkaliphilus HTCC2654]
 gi|84664124|gb|EAQ10620.1| TPR domain protein [Rhodobacterales bacterium HTCC2654]
          Length = 178

 Score = 43.2 bits (101), Expect = 0.038,   Method: Composition-based stats.
 Identities = 11/78 (14%), Positives = 26/78 (33%), Gaps = 3/78 (3%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
                ++  E+ +  +  ++  ++  A + F+      P    A  +    AFV +    
Sbjct: 56  QAPPDKWSGELLDVGLERMRVADYEGAQKAFDALVEYCPT--WAE-AWNQRAFVYFRQED 112

Query: 110 YQQAASLGEEYITQYPES 127
           Y  +    E  +   P  
Sbjct: 113 YAASLENIERALEIAPRH 130


>gi|301756633|ref|XP_002914155.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP4-like
           [Ailuropoda melanoleuca]
          Length = 454

 Score = 43.2 bits (101), Expect = 0.039,   Method: Composition-based stats.
 Identities = 19/144 (13%), Positives = 43/144 (29%), Gaps = 26/144 (18%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARKSL-------LMSAFVQYSAGK 109
           E+  ++ KE  + +A   + +      +        A+K+        L  A        
Sbjct: 270 ERGTVYFKEGKYKQAVLQYKKIVSWLEYESSFSNEDAQKAQALRLASHLNLAMCHLKLQA 329

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           +  A     + +     ++      +  G ++   + D                ++++ Y
Sbjct: 330 FSAAIESCNKALELDSNNEKG---LFRRGEAHL-AVNDFDL-------ARADFQKVLQLY 378

Query: 170 TNSPYVKGARFYV--TVGRNQLAA 191
             S     A+  V     R QLA 
Sbjct: 379 P-SNKAAKAQLAVCQQRIRKQLAR 401



 Score = 35.5 bits (81), Expect = 7.2,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 32/78 (41%), Gaps = 2/78 (2%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKAYEYF 80
             L    ++A+C L      ++ +    ++  D   ++ ++ +    L   +F  A   F
Sbjct: 312 LRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFDLARADF 371

Query: 81  NQCSRDFPFAGVARKSLL 98
            +  + +P +  A K+ L
Sbjct: 372 QKVLQLYP-SNKAAKAQL 388


>gi|307565266|ref|ZP_07627759.1| tetratricopeptide repeat protein [Prevotella amnii CRIS 21A-A]
 gi|307345935|gb|EFN91279.1| tetratricopeptide repeat protein [Prevotella amnii CRIS 21A-A]
          Length = 861

 Score = 43.2 bits (101), Expect = 0.039,   Method: Composition-based stats.
 Identities = 11/115 (9%), Positives = 33/115 (28%), Gaps = 22/115 (19%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
             ++    L +F  + +  L  +   +S+                  +A     + N++ 
Sbjct: 609 IRKMKSL-LFLFGILTIFTLSSFGINTSK-----------------NEANRLYNKGNYAA 650

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           A + +    +      ++           Y      +A    E  +   P+  ++
Sbjct: 651 AAQAYEFLLQK----NISPSLYYNLGNAYYKQDSIAKAVIAYERALRLSPDDNDI 701


>gi|154503253|ref|ZP_02040313.1| hypothetical protein RUMGNA_01077 [Ruminococcus gnavus ATCC 29149]
 gi|153796247|gb|EDN78667.1| hypothetical protein RUMGNA_01077 [Ruminococcus gnavus ATCC 29149]
          Length = 451

 Score = 43.2 bits (101), Expect = 0.039,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 28/98 (28%), Gaps = 12/98 (12%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           Y+  +  L   N+  A +   +       +        +LL        +G  + A +  
Sbjct: 357 YQNGMAALNVANYETAIDALGKVVRMDEQYDSGA----ALLNLGIAYMRSGDNENAKTYF 412

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
                 +P ++N          S    + D   D   T
Sbjct: 413 NRVAELFPGTENEA-----TAKSNLNSMGDTTADDTKT 445


>gi|74149301|dbj|BAE22424.1| unnamed protein product [Mus musculus]
          Length = 825

 Score = 43.2 bits (101), Expect = 0.039,   Method: Composition-based stats.
 Identities = 31/240 (12%), Positives = 76/240 (31%), Gaps = 40/240 (16%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLM 99
           Q+S    L   +D      +  K        ++ KA E++      D   +     +L  
Sbjct: 469 QASSYADLAVNSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYN 524

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
                    +  +A    + ++  +   +N   V   +   Y +++ D           +
Sbjct: 525 IGLTYKKLNRLDEAL---DSFLKLHAILRNSAQVLCQIANIY-ELMEDPN-------QAI 573

Query: 160 QYMSRIVERYT-NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA-IPRFQLVL 217
           +++ +++     +S     A   +    +    K  +  +YY +   Y  + I   + + 
Sbjct: 574 EWLMQLISVVPTDSQ----ALSKLGELYDSEGDKS-QAFQYYYESYRYFPSNIEVIEWLG 628

Query: 218 ANYSDAEHAEEAMARLVEA-----------------YVALALMDEAREVVSLIQERYPQG 260
           A Y D +  E+A+     A                 +       +A +    I  ++P+ 
Sbjct: 629 AYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKEIHRKFPEN 688


>gi|271500232|ref|YP_003333257.1| tetratricopeptide domain-containing protein [Dickeya dadantii
           Ech586]
 gi|270343787|gb|ACZ76552.1| tetratricopeptide domain protein [Dickeya dadantii Ech586]
          Length = 389

 Score = 43.2 bits (101), Expect = 0.039,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 58/185 (31%), Gaps = 36/185 (19%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              ++    + +A E F Q   +  F   A +  L+      S   +  A    E+ +  
Sbjct: 114 GRDYMVAGLYDRAEEIFKQLVDEEDFRVSALQ-QLLQI--HQSTSDWPNAIDTAEKLVKL 170

Query: 124 YPESKNVDYVYYLVGMSYAQM-IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
                         G +  +  I     +Q      LQ M         S  +  A   +
Sbjct: 171 --------------GKTQFRSEIAHFYCEQ-----ALQAM--------GSDDLDKALAML 203

Query: 183 T---VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                  +Q A   + +GR Y+ +  Y  A+   Q VL    D E   E +  L E Y  
Sbjct: 204 KKASAADSQCARVSIMLGRIYMAQQNYTQAVTLLQQVLE--QDTELVSETLPMLQECYRH 261

Query: 240 LALMD 244
           L   +
Sbjct: 262 LQQPE 266


>gi|1663530|gb|AAB18614.1| phosphoprotein phosphatase [Rattus norvegicus]
          Length = 479

 Score = 43.2 bits (101), Expect = 0.039,   Method: Composition-based stats.
 Identities = 23/148 (15%), Positives = 47/148 (31%), Gaps = 31/148 (20%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF----VQ-YSA 107
           +   E+  +A  + K +++  A ++++Q     P        +S    A+       Y+ 
Sbjct: 6   KRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS---LAYLRTECYGYAL 62

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           G   +A  L ++YI            YY    S   +           +  L+    +V+
Sbjct: 63  GDATRAIELDKKYIK----------GYYRRAASNMAL--------GKFRAALRDYETVVK 104

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVE 195
              N      A+         +  K  E
Sbjct: 105 VKPNDK---DAKMKYQECSKIVKQKAFE 129


>gi|18202593|sp|Q61371|IFT88_MOUSE RecName: Full=Intraflagellar transport protein 88 homolog; AltName:
           Full=Recessive polycystic kidney disease protein Tg737;
           AltName: Full=Tetratricopeptide repeat protein 10;
           Short=TPR repeat protein 10; AltName:
           Full=TgN(Imorpk)737Rpw
 gi|499647|gb|AAB59705.1| unknown [Mus musculus]
          Length = 824

 Score = 43.2 bits (101), Expect = 0.039,   Method: Composition-based stats.
 Identities = 31/240 (12%), Positives = 76/240 (31%), Gaps = 40/240 (16%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLM 99
           Q+S    L   +D      +  K        ++ KA E++      D   +     +L  
Sbjct: 468 QASSYADLAVNSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYN 523

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
                    +  +A    + ++  +   +N   V   +   Y +++ D           +
Sbjct: 524 IGLTYKKLNRLDEAL---DSFLKLHAILRNSAQVLCQIANIY-ELMEDPN-------QAI 572

Query: 160 QYMSRIVERYT-NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA-IPRFQLVL 217
           +++ +++     +S     A   +    +    K  +  +YY +   Y  + I   + + 
Sbjct: 573 EWLMQLISVVPTDSQ----ALSKLGELYDSEGDKS-QAFQYYYESYRYFPSNIEVIEWLG 627

Query: 218 ANYSDAEHAEEAMARLVEA-----------------YVALALMDEAREVVSLIQERYPQG 260
           A Y D +  E+A+     A                 +       +A +    I  ++P+ 
Sbjct: 628 AYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKEIHRKFPEN 687


>gi|190575257|ref|YP_001973102.1| hypothetical protein Smlt3384 [Stenotrophomonas maltophilia K279a]
 gi|190013179|emb|CAQ46812.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a]
          Length = 374

 Score = 43.2 bits (101), Expect = 0.040,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 33/73 (45%), Gaps = 4/73 (5%)

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           ++L   A+  +  G  QQA +L  E I     +  V Y++Y+ G+++ + +RD     + 
Sbjct: 69  QALEARAYAVFREGDLQQAVALFGELIAL---APEVPYLHYMRGLAH-KYLRDWAASLQD 124

Query: 155 TKLMLQYMSRIVE 167
            +   Q      E
Sbjct: 125 NRQSEQLRGEFDE 137


>gi|218779809|ref|YP_002431127.1| hypothetical protein Dalk_1963 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218761193|gb|ACL03659.1| TPR repeat-containing protein [Desulfatibacillum alkenivorans
           AK-01]
          Length = 233

 Score = 43.2 bits (101), Expect = 0.040,   Method: Composition-based stats.
 Identities = 14/125 (11%), Positives = 36/125 (28%), Gaps = 16/125 (12%)

Query: 64  AVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
                   N+ +A E++N+           + ++LL   +       Y +A  +  + + 
Sbjct: 118 GQTAYDAGNYDEAIEWWNKSLKALSGDPIESSRALLGLGYAYEQTADYDKALEMYNKVLG 177

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYD---QRATKLMLQYMSRIVERYTNSPYVKGAR 179
                         +G+   +    V      +      +Q   +    Y  S Y +  +
Sbjct: 178 V------------KMGLGKEEAALAVARIYEVKGDADKSVQAYEKFAADYPGSAYAQMVK 225

Query: 180 FYVTV 184
             +  
Sbjct: 226 EKLAA 230


>gi|163801222|ref|ZP_02195121.1| Peptidase C39, bacteriocin processing [Vibrio sp. AND4]
 gi|159174711|gb|EDP59511.1| Peptidase C39, bacteriocin processing [Vibrio sp. AND4]
          Length = 1546

 Score = 43.2 bits (101), Expect = 0.040,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 50/140 (35%), Gaps = 23/140 (16%)

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           M++ Q I++    Q A+           ++Y NS +   A  ++               R
Sbjct: 90  MAFGQAIQNWNKHQYAS--ASVEFDIFRKKYPNSAWASEATLHMA-CN----------AR 136

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEH------AEEAMARLVEAYVALALMDEAREVVSL 252
           +    G+Y  A   F  V+    D+E+        +A +RL    +     +EA+ + + 
Sbjct: 137 F---TGQYSTANQLFNEVIQTNQDSEYSGAQQMVAKAKSRLAVLRLMENNPEEAKTLFAE 193

Query: 253 IQERYPQGYWARYVE-TLVK 271
           + +  P      Y    L K
Sbjct: 194 VVKNAPDWRLRSYASIWLRK 213



 Score = 40.1 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 21/142 (14%), Positives = 56/142 (39%), Gaps = 7/142 (4%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA-FVQYSAGK 109
            +D   +R  + +A+    +  ++ A   F+   + +P +  A ++ L  A   ++  G+
Sbjct: 82  ASDDEQERMAFGQAIQNWNKHQYASASVEFDIFRKKYPNSAWASEATLHMACNARF-TGQ 140

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y  A  L  E I    +S+       +V  + +++   +   +   +      + +V+  
Sbjct: 141 YSTANQLFNEVIQTNQDSEYSG-AQQMVAKAKSRLAV-LRLMENNPEEAKTLFAEVVKNA 198

Query: 170 TNSP---YVKGARFYVTVGRNQ 188
            +     Y       +++ +NQ
Sbjct: 199 PDWRLRSYASIWLRKLSLLKNQ 220


>gi|315917695|ref|ZP_07913935.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC
           25563]
 gi|317059219|ref|ZP_07923704.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
 gi|313684895|gb|EFS21730.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
 gi|313691570|gb|EFS28405.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC
           25563]
          Length = 407

 Score = 43.2 bits (101), Expect = 0.040,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAE-EAMARLVEAYVALALMDEAREVVSLIQERYP 258
           Y   G+Y  +I  FQ  L++  ++     E   +L  AY  L    E ++ ++L++ERY 
Sbjct: 330 YYGLGKYQQSIEYFQKSLSHKGNSSERRAETYYKLASAYNKLGEKREYKKYLTLLKERYA 389

Query: 259 QGYWARYVE 267
              W +  +
Sbjct: 390 NSLWGKKAQ 398


>gi|213406543|ref|XP_002174043.1| serine/threonine-protein phosphatase [Schizosaccharomyces japonicus
           yFS275]
 gi|212002090|gb|EEB07750.1| serine/threonine-protein phosphatase [Schizosaccharomyces japonicus
           yFS275]
          Length = 471

 Score = 43.2 bits (101), Expect = 0.040,   Method: Composition-based stats.
 Identities = 16/132 (12%), Positives = 35/132 (26%), Gaps = 25/132 (18%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEE 119
            +      E   ++A + + +     P      + +S     F       Y  A     +
Sbjct: 8   NQGNKLFGEGRLAEAIKCYTKAIELDPENAIFYSNRS-----FAYLKLEDYGFAIEDATK 62

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN-------S 172
            I + P+       YY   +++  + +         K  L+     V    N       S
Sbjct: 63  AIEKNPKYPKG---YYRRAVAHMALYQ--------PKEALKDFKNAVRYAPNDKSALQKS 111

Query: 173 PYVKGARFYVTV 184
              +     +  
Sbjct: 112 QECEKLVRRIRF 123


>gi|162456117|ref|YP_001618484.1| hypothetical protein sce7834 [Sorangium cellulosum 'So ce 56']
 gi|161166699|emb|CAN98004.1| hypothetical protein sce7834 [Sorangium cellulosum 'So ce 56']
          Length = 319

 Score = 43.2 bits (101), Expect = 0.040,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 33/91 (36%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
           A    VG   ++ +     +       + +  +A   L +   ++A   +      +P +
Sbjct: 171 ATASAVGARDRAQQPPRPRAEEPAAGPQALLLRAQTQLGQGKSAEANASYRALLAQYPAS 230

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
             AR +L+    +    GK  +A    + Y+
Sbjct: 231 PEARAALVSLGQIALHQGKAAEALGYFDRYL 261


>gi|124023886|ref|YP_001018193.1| hypothetical protein P9303_21931 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964172|gb|ABM78928.1| Hypothetical protein P9303_21931 [Prochlorococcus marinus str. MIT
           9303]
          Length = 387

 Score = 43.2 bits (101), Expect = 0.040,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 43/128 (33%), Gaps = 15/128 (11%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           +D +         + + Y     ++K + + +A +  N+   DFP      +S       
Sbjct: 221 KDRWGPEPKASISEEKYYLF-KTYVKNKQYKEALKLSNKLVIDFPDDP---RSWTHLGVA 276

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
            +    Y  A     + I   P  ++    YY  G+ Y+ +              ++  +
Sbjct: 277 YFILKDYSAAKEQLNKAIFINPLFED---AYYNRGLVYSAL--------GLYDQAIRDYT 325

Query: 164 RIVERYTN 171
           + +  Y +
Sbjct: 326 KAIRMYPD 333


>gi|115752602|ref|XP_797370.2| PREDICTED: similar to Transmembrane and tetratricopeptide repeat
           containing 3 [Strongylocentrotus purpuratus]
 gi|115939107|ref|XP_001195096.1| PREDICTED: similar to Transmembrane and tetratricopeptide repeat
           containing 3 [Strongylocentrotus purpuratus]
          Length = 844

 Score = 43.2 bits (101), Expect = 0.040,   Method: Composition-based stats.
 Identities = 16/122 (13%), Positives = 43/122 (35%), Gaps = 17/122 (13%)

Query: 53  DVRYQREVYEKAVLFLKEQN---FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           D +++  +Y  A+   +  N      A +   +     P + ++  +L M A        
Sbjct: 634 DPKHKMALYNSALYIQESGNAARRQDAIKRLQKVIEIDPESEMSYSTLGMLAV---DDND 690

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
              A    ++ +   P S++     + + M ++        D +       Y+  +++ +
Sbjct: 691 NPGALQYYQKALEINPSSRH---ALFNIAMIHS--------DDKHPLQAKPYLENLLQHH 739

Query: 170 TN 171
            N
Sbjct: 740 PN 741


>gi|70998482|ref|XP_753963.1| serine/threonine protein phosphatase PPT1 [Aspergillus fumigatus
           Af293]
 gi|66851599|gb|EAL91925.1| serine/threonine protein phosphatase PPT1 [Aspergillus fumigatus
           Af293]
 gi|159126304|gb|EDP51420.1| serine/threonine protein phosphatase PPT1 [Aspergillus fumigatus
           A1163]
          Length = 480

 Score = 43.2 bits (101), Expect = 0.040,   Method: Composition-based stats.
 Identities = 17/151 (11%), Positives = 47/151 (31%), Gaps = 27/151 (17%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF---PFAGVARKSLLMSAFVQYS 106
           + +D+     +  +      E  +  A E++ Q    +   P +  + ++          
Sbjct: 2   AASDLEAATALKVQGNKAFAEHEWPTAVEFYTQAIDKYDREP-SFFSNRAQ-----AYIK 55

Query: 107 AGKYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
              Y  A +   + +   P      Y   Y+   ++   ++          +  L+    
Sbjct: 56  LEAYGFAIADATKALELDPS-----YVKAYWRRALANTAILN--------YREALKDFKA 102

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           +V++  N+     A+  +      +   E E
Sbjct: 103 VVKKEPNNR---DAKLKLAECEKLVRRLEFE 130


>gi|257452679|ref|ZP_05617978.1| hypothetical protein F3_06399 [Fusobacterium sp. 3_1_5R]
 gi|257466540|ref|ZP_05630851.1| hypothetical protein FgonA2_03768 [Fusobacterium gonidiaformans
           ATCC 25563]
          Length = 410

 Score = 43.2 bits (101), Expect = 0.041,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAE-EAMARLVEAYVALALMDEAREVVSLIQERYP 258
           Y   G+Y  +I  FQ  L++  ++     E   +L  AY  L    E ++ ++L++ERY 
Sbjct: 333 YYGLGKYQQSIEYFQKSLSHKGNSSERRAETYYKLASAYNKLGEKREYKKYLTLLKERYA 392

Query: 259 QGYWARYVE 267
              W +  +
Sbjct: 393 NSLWGKKAQ 401


>gi|225851470|ref|YP_002731704.1| TPR Domain containing protein [Persephonella marina EX-H1]
 gi|225644946|gb|ACO03132.1| TPR Domain containing protein [Persephonella marina EX-H1]
          Length = 345

 Score = 43.2 bits (101), Expect = 0.041,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 35/94 (37%), Gaps = 11/94 (11%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKY 110
           D       Y    ++L+E N  KA +Y  +           +K+       +  +  G  
Sbjct: 56  DKNNPESYYYLGSIYLEEGNPEKAVKYLKKAVEK------GKKAEYFNDLGYAYFLKGDP 109

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
           ++A     + I   P   ++   YY  G+++ +M
Sbjct: 110 EKAIKCYTKAIEIKP---DLAVAYYNRGLAFKKM 140



 Score = 38.9 bits (90), Expect = 0.71,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 33/103 (32%), Gaps = 21/103 (20%)

Query: 47  YLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
           YL    +   + E +      +  + +  KA + + +          A +     A   Y
Sbjct: 82  YLKKAVEKGKKAEYFNDLGYAYFLKGDPEKAIKCYTK----------AIEIKPDLAVAYY 131

Query: 106 -------SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
                    G Y +A       I   PE    DY YY +G+ Y
Sbjct: 132 NRGLAFKKMGDYDEAVKNYNRAIALNPEDP--DY-YYNLGIVY 171


>gi|71907800|ref|YP_285387.1| putative lipoprotein [Dechloromonas aromatica RCB]
 gi|71847421|gb|AAZ46917.1| putative lipoprotein [Dechloromonas aromatica RCB]
          Length = 205

 Score = 43.2 bits (101), Expect = 0.041,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 38/108 (35%), Gaps = 13/108 (12%)

Query: 14  AWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF 73
            + ++    AL    S+A+    G +   S++ +  ++       +        L++ N 
Sbjct: 1   MFTFKRLSVALVFSASVAISGCAGNKPSMSQEEFSAAMAQSSMSVD------SLLEKGNQ 54

Query: 74  SKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            +A +     ++  P           +  A V + A  Y QA    EE
Sbjct: 55  EEAVKVLGDLAKRNPGRKEPW-----IRMAKVHFDAENYAQAIVAAEE 97


>gi|304321214|ref|YP_003854857.1| hypothetical protein PB2503_08299 [Parvularcula bermudensis
           HTCC2503]
 gi|303300116|gb|ADM09715.1| hypothetical protein PB2503_08299 [Parvularcula bermudensis
           HTCC2503]
          Length = 296

 Score = 43.2 bits (101), Expect = 0.041,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 40/104 (38%), Gaps = 14/104 (13%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           +     +   VE++  +     A++ +              G  YL  G    A   F  
Sbjct: 188 REAEAKLEAFVEKFPEAAQTADAKYLL--------------GDVYLATGANGEAARIFLD 233

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            +  Y D   A EA  +L +++  L   +EA  V++  ++++P 
Sbjct: 234 HVRTYRDDPKAPEAYLKLGKSFSLLNRPEEACRVLTAGEQKFPD 277



 Score = 35.5 bits (81), Expect = 7.4,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 28/76 (36%), Gaps = 8/76 (10%)

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
           A  Y++A +  E ++ ++PE+       YL+G        DV     A     +     V
Sbjct: 184 AANYREAEAKLEAFVEKFPEAAQTADAKYLLG--------DVYLATGANGEAARIFLDHV 235

Query: 167 ERYTNSPYVKGARFYV 182
             Y + P    A   +
Sbjct: 236 RTYRDDPKAPEAYLKL 251


>gi|254410290|ref|ZP_05024070.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
 gi|196183326|gb|EDX78310.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
          Length = 667

 Score = 43.2 bits (101), Expect = 0.041,   Method: Composition-based stats.
 Identities = 16/124 (12%), Positives = 40/124 (32%), Gaps = 14/124 (11%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           +  Y   ++ K     +     +A   + + +   P    A  + +         G+ ++
Sbjct: 548 NPDYPEALWSKGAALDQLGRHQEALNLYEKATTLKP--DFAE-AWINQGVALILLGQPEK 604

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A  + +  I   P S N    +     +Y ++ R            +  + + +E   N+
Sbjct: 605 AIPILDRAIQLKPNSAN---AWINKAEAYMELERYDD--------AIASLKKALEIQPNN 653

Query: 173 PYVK 176
            Y  
Sbjct: 654 EYAA 657


>gi|86139144|ref|ZP_01057714.1| hypothetical protein MED193_09145 [Roseobacter sp. MED193]
 gi|85823988|gb|EAQ44193.1| hypothetical protein MED193_09145 [Roseobacter sp. MED193]
          Length = 280

 Score = 43.2 bits (101), Expect = 0.041,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 29/85 (34%)

Query: 33  CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
               G      + V          ++  ++ A   L+E  +  A E F   ++ +P + +
Sbjct: 133 ALAAGGAPVGDQGVSPGGGELAVGEQADFDTAQQDLEEGAYQLAAEKFAIFTQSYPGSPL 192

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLG 117
           A ++           G  ++AA   
Sbjct: 193 APEADFNRGKALDGLGDTREAARAY 217



 Score = 35.5 bits (81), Expect = 7.8,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 39/114 (34%), Gaps = 16/114 (14%)

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA-KEVEIGRYYLKRGEYV 207
             ++ A +L  +  +   + Y  SP    A F      + L   +E    R YL    + 
Sbjct: 167 DLEEGAYQLAAEKFAIFTQSYPGSPLAPEADFNRGKALDGLGDTRE--AARAYL--ASFT 222

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
                             A +A+  L  A   L  +D+A   +S +  R+P G 
Sbjct: 223 GDANGAT-----------APKALFELGAALGRLGQVDQACITLSEVGVRFPGGD 265


>gi|213018745|ref|ZP_03334553.1| TPR domain protein [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|212995696|gb|EEB56336.1| TPR domain protein [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 264

 Score = 43.2 bits (101), Expect = 0.041,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 34/92 (36%), Gaps = 6/92 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYE---KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
            S    +    +     ++Y    KA    +  +   A    NQ    FP+      +L+
Sbjct: 52  KSDKFNIKISQNSGKNFDIYSILKKAKDSFELGDSETATSLLNQIIAKFPYH---ESALI 108

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
               + Y+  ++++A  +    + +YP +  V
Sbjct: 109 GLGNIYYANKEFKKAVEIYTRLLKEYPSNPYV 140


>gi|190571349|ref|YP_001975707.1| TPR domain protein [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|190357621|emb|CAQ55062.1| TPR domain protein [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
          Length = 288

 Score = 43.2 bits (101), Expect = 0.041,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 34/92 (36%), Gaps = 6/92 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYE---KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
            S    +    +     ++Y    KA    +  +   A    NQ    FP+      +L+
Sbjct: 76  KSDKFNIKISQNSGKNFDIYSILKKAKDSFELGDSETATSLLNQIIAKFPYH---ESALI 132

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
               + Y+  ++++A  +    + +YP +  V
Sbjct: 133 GLGNIYYANKEFKKAVEIYTRLLKEYPSNPYV 164


>gi|218439798|ref|YP_002378127.1| lytic transglycosylase catalytic [Cyanothece sp. PCC 7424]
 gi|218172526|gb|ACK71259.1| Lytic transglycosylase catalytic [Cyanothece sp. PCC 7424]
          Length = 724

 Score = 43.2 bits (101), Expect = 0.041,   Method: Composition-based stats.
 Identities = 34/248 (13%), Positives = 78/248 (31%), Gaps = 54/248 (21%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR----DFPFAGVARKSLLM 99
           RD  +   +      +       + +   +  A + + +  R     + +          
Sbjct: 221 RDRLVKDYSQQLTPEDWEAIGNGYWEIGQYENAAKAYYKAPRTPVNLYRYGR-------- 272

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
                +  GK  QA    ++ + ++P++          GM   +++         ++  L
Sbjct: 273 ---GLHINGKKAQAKQAYQQLLREFPDAPET-------GMGIMRLVSLSE-----SREAL 317

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQL-----------------------AAKEVEI 196
            Y+   + ++        A        +QL                       A    ++
Sbjct: 318 GYLDYAINKFPQQ--APDALLKKAEILDQLGSKTSASKARQQLLDQYGSSETAAEYRWKV 375

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV-VSLIQE 255
            + Y  +GE+V A    Q +    SD   A +A   + +    L    +AR+  +  +  
Sbjct: 376 AKSYGDKGEFVKAWEWAQPITIKASDTNVAPKAAYWIGKWAQKLNRPQDARDAFLHTLGR 435

Query: 256 RYPQGYWA 263
            +PQ Y+A
Sbjct: 436 -HPQSYYA 442



 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 52/205 (25%), Gaps = 59/205 (28%)

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
           +  +A   LL          + ++A     + I  YP+   V    Y +G          
Sbjct: 117 YPTLAPYILLKQGRGYELTNENERAQEAWLKLIETYPQDPVVAEALYFLG---------- 166

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFY------------------------VTV 184
            YD +  +         + ++   P                                +  
Sbjct: 167 KYDPQYWEQA-------IAQFPQHPRTWDIIQQRLKENPKQPQLMLLLVKHNIFAPEINE 219

Query: 185 GRNQLAAKEVE----------IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
            R++L  K+            IG  Y + G+Y  A          Y  A      + R  
Sbjct: 220 VRDRLV-KDYSQQLTPEDWEAIGNGYWEIGQYENAA-------KAYYKAPRTPVNLYRYG 271

Query: 235 EAYVALALMDEAREVVSLIQERYPQ 259
                     +A++    +   +P 
Sbjct: 272 RGLHINGKKAQAKQAYQQLLREFPD 296


>gi|126738723|ref|ZP_01754419.1| TPR domain protein [Roseobacter sp. SK209-2-6]
 gi|126719904|gb|EBA16611.1| TPR domain protein [Roseobacter sp. SK209-2-6]
          Length = 189

 Score = 43.2 bits (101), Expect = 0.042,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 42/123 (34%), Gaps = 14/123 (11%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++ +A   L++   + A E+    +   P    A +  L+ A   Y+AG Y  A +  E 
Sbjct: 72  LFSRAQKALEQGEVAAATEHLTALTDHAP--DFA-RGWLLRARALYAAGYYGPAVADLER 128

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +   P   +  +          Q++  V       K   Q   R    + +   V  A 
Sbjct: 129 ALALNPNDYDAIFAL-------GQVLETVQRP----KRAYQAYLRAKSIHPHHEEVTTAL 177

Query: 180 FYV 182
             +
Sbjct: 178 ERL 180


>gi|329893837|ref|ZP_08269908.1| hypothetical protein IMCC3088_2332 [gamma proteobacterium IMCC3088]
 gi|328923436|gb|EGG30751.1| hypothetical protein IMCC3088_2332 [gamma proteobacterium IMCC3088]
          Length = 698

 Score = 43.2 bits (101), Expect = 0.042,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 85/246 (34%), Gaps = 39/246 (15%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           LT+ F++A    V      ++ +               ++A   L   ++          
Sbjct: 474 LTLAFALAGIADVNLSTAQAQQLRTLDTEYRAIAERHLDQAEQHLSLGDYETRQGNIEAA 533

Query: 84  SRDFPFAGVARKSLLMSAFVQY-----SAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            R +    + +   L++A++       ++G  Q+A +  E  +TQ  ++ ++ +     G
Sbjct: 534 LRRY-QTALTKNPQLLAAYINKADVEANSGNNQEAINTLERGLTQIADNPDLAFAL---G 589

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           +++   IR+  Y Q  T+L                  + AR+  T     +A        
Sbjct: 590 LAH---IRNQDYRQGLTQLASAA------------KAESARYRYTYA---IALH------ 625

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
               +G+   AI   + V   + +    EEA+  LV+          A E V  + E  P
Sbjct: 626 ---GQGKLHDAIRTLRGVSRKWPN---NEEALQALVQFAAEADDTRTALEAVRQLTELAP 679

Query: 259 QGYWAR 264
                +
Sbjct: 680 NNRQYQ 685


>gi|220928873|ref|YP_002505782.1| tetratricopeptide TPR_2 [Clostridium cellulolyticum H10]
 gi|219999201|gb|ACL75802.1| tetratricopeptide TPR_2 [Clostridium cellulolyticum H10]
          Length = 374

 Score = 43.2 bits (101), Expect = 0.042,   Method: Composition-based stats.
 Identities = 16/120 (13%), Positives = 38/120 (31%), Gaps = 4/120 (3%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
            Y  YK+       +A+           +   + +        ++  +      ++ + +
Sbjct: 249 LYGQYKYIEAADKLLAIPEKDLSADNKKKYDSIKANVLKNAANQLTIEGTSLYNKKKYKE 308

Query: 76  AYEYFNQCSRDFPFAGVA--RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
           A +   +          +   K+L        +A + Q+ A      I+ YP+S  V Y 
Sbjct: 309 AIQKLEKVFTL--GTKWSFGDKALYTLGKSYVAANEPQKGAEAYNRLISDYPDSAYVKYA 366



 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 31/71 (43%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
             + +Y  AI + + V    +     ++A+  L ++YVA     +  E  + +   YP  
Sbjct: 301 YNKKKYKEAIQKLEKVFTLGTKWSFGDKALYTLGKSYVAANEPQKGAEAYNRLISDYPDS 360

Query: 261 YWARYVETLVK 271
            + +Y  + ++
Sbjct: 361 AYVKYARSRLQ 371


>gi|75675934|ref|YP_318355.1| hypothetical protein Nwi_1742 [Nitrobacter winogradskyi Nb-255]
 gi|74420804|gb|ABA05003.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255]
          Length = 451

 Score = 43.2 bits (101), Expect = 0.042,   Method: Composition-based stats.
 Identities = 22/174 (12%), Positives = 56/174 (32%), Gaps = 33/174 (18%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
           ++  ++  CF     + ++  +    ++     ++ Y+     +    +    +      
Sbjct: 11  SVLLTMTACFSGAAAQSTTSPISASLISAASAVQQDYDALFQQM----YKNPAD----LE 62

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
             F     A +++          G Y+ A    E  +   P   N+  V   +G+ Y ++
Sbjct: 63  ASF---KFAEQAV--------KRGDYEAAIGALERMLFFNP---NLPRVKLELGVLYFKL 108

Query: 145 IRDVPYDQRATKLMLQYMSRIVE--RYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
                    + +L   Y    ++     +       R Y+T    +LA  E  +
Sbjct: 109 --------GSYELARSYFQEAIKGADAPDDIRA-QVRAYLTEIDRRLARYEFSV 153


>gi|332707691|ref|ZP_08427719.1| hypothetical protein LYNGBM3L_54490 [Lyngbya majuscula 3L]
 gi|332353600|gb|EGJ33112.1| hypothetical protein LYNGBM3L_54490 [Lyngbya majuscula 3L]
          Length = 463

 Score = 43.2 bits (101), Expect = 0.042,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 37/111 (33%), Gaps = 14/111 (12%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A  +L++     A E +       P      ++        Y  G    A +   + 
Sbjct: 85  YLLANTYLQQGKNQLALEQYQIAIALDPTLS---QAYYNLGIAFYKEGAPDSAIAAYRQA 141

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           ++  PES ++   YY +G++           Q   +  +++    +    +
Sbjct: 142 LSFNPESADI---YYNLGLALES--------QGNQEEAIEHYQATIRLDPD 181


>gi|308535397|ref|YP_002140778.2| peptidoglycan L,D-transpeptidase lipoprotein [Geobacter
           bemidjiensis Bem]
 gi|308052742|gb|ACH40982.2| peptidoglycan L,D-transpeptidase lipoprotein, YkuD family, TPR
           domain-containing protein [Geobacter bemidjiensis Bem]
          Length = 335

 Score = 43.2 bits (101), Expect = 0.042,   Method: Composition-based stats.
 Identities = 19/183 (10%), Positives = 48/183 (26%), Gaps = 53/183 (28%)

Query: 5   LGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKA 64
           +G  +      +    +  L +  +  +    G             +         +E+A
Sbjct: 1   MGEGMREVRRVSRNWEQLCLFVVLATILFTAGGCSH----------LDGTFGAGSAFEEA 50

Query: 65  VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
                 +++  A + +   S+ +P      ++L            ++         I  +
Sbjct: 51  NRHSVLRDYQAALKGYELASKKYPTT--GDRAL------------FEMGI------IHSH 90

Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
           P++   DY                          L     +++ Y  S Y + +   V  
Sbjct: 91  PDNPQKDY-----------------------GKALDCYRTLIKEYPRSSYRQDSEMMVFY 127

Query: 185 GRN 187
             N
Sbjct: 128 LVN 130



 Score = 36.2 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 30/71 (42%), Gaps = 6/71 (8%)

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARL--VEAYVALALMD--EAREVVSLIQERYPQ 259
            +Y AA+  ++L    Y      + A+  +  + ++      D  +A +    + + YP+
Sbjct: 57  RDYQAALKGYELASKKYPTTG--DRALFEMGIIHSHPDNPQKDYGKALDCYRTLIKEYPR 114

Query: 260 GYWARYVETLV 270
             + +  E +V
Sbjct: 115 SSYRQDSEMMV 125


>gi|307944548|ref|ZP_07659888.1| tetratricopeptide TPR2 protein [Roseibium sp. TrichSKD4]
 gi|307772297|gb|EFO31518.1| tetratricopeptide TPR2 protein [Roseibium sp. TrichSKD4]
          Length = 308

 Score = 43.2 bits (101), Expect = 0.042,   Method: Composition-based stats.
 Identities = 12/114 (10%), Positives = 33/114 (28%), Gaps = 14/114 (12%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A       ++  A   F     ++P   ++  +         +   Y+ A    + +
Sbjct: 187 YDSAYGLAVNGDYQGAENGFRAFLSNYPGHQLSSNAQYWLGESLLAQNNYRDA---ADAF 243

Query: 121 ITQYPESKN---VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           +  Y +  N          +G+S                      + ++ ++ N
Sbjct: 244 LKTYTDHPNSSKSADSLLKLGVSL--------RGLGEIDAACATFTELLNKFPN 289



 Score = 39.3 bits (91), Expect = 0.53,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 26/84 (30%), Gaps = 8/84 (9%)

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
            SA+     G YQ A +    +++ YP  +      Y +G S           Q   +  
Sbjct: 188 DSAYGLAVNGDYQGAENGFRAFLSNYPGHQLSSNAQYWLGESLLA--------QNNYRDA 239

Query: 159 LQYMSRIVERYTNSPYVKGARFYV 182
                +    + NS     +   +
Sbjct: 240 ADAFLKTYTDHPNSSKSADSLLKL 263


>gi|296412888|ref|XP_002836151.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295629958|emb|CAZ80342.1| unnamed protein product [Tuber melanosporum]
          Length = 818

 Score = 43.2 bits (101), Expect = 0.042,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 45/139 (32%), Gaps = 22/139 (15%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108
            D    +  Y     ++ +Q + KAYE + Q        P              + Y   
Sbjct: 290 ADNSDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIN 343

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +Y+ A       I   P    +  V+Y +G +  +   +   D       L    R  E 
Sbjct: 344 QYRDALDAYSRAIRLNP---YISEVWYDLG-TLYESCNNQTND------ALDAYQRAAEL 393

Query: 169 YTNSPYVKGARFYVTVGRN 187
              + ++   +  +++ RN
Sbjct: 394 DPTNQHI---KARLSLLRN 409


>gi|255571385|ref|XP_002526641.1| conserved hypothetical protein [Ricinus communis]
 gi|223534033|gb|EEF35753.1| conserved hypothetical protein [Ricinus communis]
          Length = 227

 Score = 43.2 bits (101), Expect = 0.042,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 42/113 (37%), Gaps = 10/113 (8%)

Query: 30  IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF-- 87
           +A+        Q+ +D   +    V     + EK      + +FS A  YF     ++  
Sbjct: 68  LALAESYDPVSQAEKDASANKSQRVSEAIGLLEKGRELQAQGDFSAALPYFTLVVENYKD 127

Query: 88  -PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY-ITQ--YPE-SKNVDYVYY 135
             F+  AR   +  A   Y  G  Q+A +  E+  I+   YPE    +    Y
Sbjct: 128 FAFSEYAR---VGRALALYEVGDKQEAIAEMEDVSISLKGYPEVHAALAAALY 177


>gi|303326657|ref|ZP_07357099.1| TPR domain protein [Desulfovibrio sp. 3_1_syn3]
 gi|302862645|gb|EFL85577.1| TPR domain protein [Desulfovibrio sp. 3_1_syn3]
          Length = 1004

 Score = 43.2 bits (101), Expect = 0.043,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 75/228 (32%), Gaps = 34/228 (14%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA--- 101
           D   + V       ++  +A   + E  F +A     +           R+ +L      
Sbjct: 319 DEQGNPVPKPPEPDKMLAEAERLISENKFDEALPQLEKIRALTDITPEMREKVLYYISDC 378

Query: 102 -FVQYSAGK---YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
            + +Y+      Y+   S   E +     S  V      +G++   +   V         
Sbjct: 379 LWARYADNPLAGYEAIVSSTSEAMNADLRSPRVPDALLRLGLANVNVGNLVD-------- 430

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
              Y+  ++ RY +  Y   A+ +  +G+ QL            KR     A   F +VL
Sbjct: 431 AGGYIVALLRRYPD--YPGVAQGFTALGQAQL------------KRKLNAEAEQSFSIVL 476

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
             Y ++   + A   L +A+      D+A+     I   +    W RY
Sbjct: 477 DKYPESSQLQAASVGLAQAFFNQKKHDQAQ-----IILDFISKRWPRY 519



 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 17/140 (12%), Positives = 46/140 (32%), Gaps = 12/140 (8%)

Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYVKGA-RFYVTV 184
            ++    Y    +   + RD    ++  K   +   ++++ +T         A    +  
Sbjct: 835 PDIP--LYQRAYATYFLARDAEN-RKDIKSSYELNRKVIDLFTQLQDERSDKADPQRIKD 891

Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
               L    ++I     +  E +  + R+   +    ++        R    Y  L    
Sbjct: 892 AVAAL----MDICEVGNRIPEALQWVNRYNDFVPE--NSPEYPGLRFREARLYRKLGNSS 945

Query: 245 EAREVVSLIQERYPQGYWAR 264
            A+ ++  +  R+P   +A+
Sbjct: 946 RAQALLEDLARRFPDSPFAK 965



 Score = 35.1 bits (80), Expect = 9.7,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 57/173 (32%), Gaps = 23/173 (13%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI-T 122
               LK +  ++A + F+     +P +   + + +  A   ++  K+ QA  + + +I  
Sbjct: 456 GQAQLKRKLNAEAEQSFSIVLDKYPESSQLQAASVGLAQAFFNQKKHDQAQIILD-FISK 514

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
           ++P        YY+   S+  +        +     L      +               +
Sbjct: 515 RWPR-------YYIGEPSFLLLQAGNDETLQRIDTALDLYWLYINLEPGRQGNDSILLKM 567

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
                         G  YL++G   AA   +  +   ++ +  A  A  RL E
Sbjct: 568 --------------GDTYLRQGNATAADFIYHELERRFAASPAASTARLRLAE 606


>gi|258545745|ref|ZP_05705979.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
 gi|258518990|gb|EEV87849.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
          Length = 193

 Score = 43.2 bits (101), Expect = 0.043,   Method: Composition-based stats.
 Identities = 11/66 (16%), Positives = 20/66 (30%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           +E+ +   +  N + A   F Q          A ++        Y    Y  A+     Y
Sbjct: 92  FEEGLAQYRAGNLNGAIGTFEQYLNSGASGPEAAQAQYWLGDAYYMQRNYDMASRYLGAY 151

Query: 121 ITQYPE 126
           +   P 
Sbjct: 152 LKAQPN 157



 Score = 36.2 bits (83), Expect = 5.2,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 28/91 (30%), Gaps = 8/91 (8%)

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
            QY AG    A    E+Y+             Y +G +Y          QR   +  +Y+
Sbjct: 97  AQYRAGNLNGAIGTFEQYLNSGASGPEAAQAQYWLGDAYYM--------QRNYDMASRYL 148

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
              ++   N    + A   +      +   E
Sbjct: 149 GAYLKAQPNGDRAQAALSRLVESLRAMGRTE 179


>gi|163785664|ref|ZP_02180201.1| hypothetical protein HG1285_19011 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879068|gb|EDP73035.1| hypothetical protein HG1285_19011 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 248

 Score = 43.2 bits (101), Expect = 0.043,   Method: Composition-based stats.
 Identities = 23/174 (13%), Positives = 50/174 (28%), Gaps = 35/174 (20%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
            ++  A     Q    +P    A     +   +       ++A  + ++         + 
Sbjct: 36  NDYPDAINTLKQYLEKYPQGEYALNVKSLLVKIYIKQKDLKKAIEVLKQM-------PDT 88

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP---------------YV 175
           D   Y + + Y ++                Y   +  R+                   Y 
Sbjct: 89  DENRYQLAVLYYKL--------GDLTQAKSYFEDLYTRFPKYRNDIAYYLAKIQLKLGYP 140

Query: 176 KGARFYVTVGR-----NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           + A+ Y+         N +A     +G  Y + G    A+  F  V+  Y +A+
Sbjct: 141 QLAKKYLEEAVNGSDYNHVAESYYLLGLIYQQEGNLEKALNNFVNVVYLYPEAK 194



 Score = 35.9 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 35/103 (33%), Gaps = 21/103 (20%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             +  + + +E+Y    Y    +  +                 Y+K+ +   AI     V
Sbjct: 40  DAINTLKQYLEKYPQGEYALNVKSLLVKI--------------YIKQKDLKKAI----EV 81

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           L    D +     +A L   Y  L  + +A+     +  R+P+
Sbjct: 82  LKQMPDTDENRYQLAVL---YYKLGDLTQAKSYFEDLYTRFPK 121


>gi|154151571|ref|YP_001405189.1| response regulator receiver protein [Candidatus Methanoregula
           boonei 6A8]
 gi|154000123|gb|ABS56546.1| response regulator receiver protein [Methanoregula boonei 6A8]
          Length = 387

 Score = 43.2 bits (101), Expect = 0.043,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 33/86 (38%), Gaps = 3/86 (3%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           D         +  +++Y   +    + N+  A +YF +  ++ P + VA  +      V 
Sbjct: 155 DTVKHKKETRKTLKDLYTYGLDHQAKGNYDAALQYFTEILKNNP-SDVAIWA--EKGDVL 211

Query: 105 YSAGKYQQAASLGEEYITQYPESKNV 130
           Y  GK + A    +  +   P ++  
Sbjct: 212 YKLGKSEDALCAVDTALGIEPANEYA 237


>gi|145253611|ref|XP_001398318.1| serine/threonine-protein phosphatase T [Aspergillus niger CBS
           513.88]
 gi|134083887|emb|CAK48791.1| unnamed protein product [Aspergillus niger]
          Length = 479

 Score = 43.2 bits (101), Expect = 0.043,   Method: Composition-based stats.
 Identities = 16/149 (10%), Positives = 49/149 (32%), Gaps = 27/149 (18%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF---PFAGVARKSLLMSAFVQYSAG 108
            D+     +  +      E  +  A +++++    +   P +  + ++            
Sbjct: 4   PDLEAATALKVQGNKAFAEHEWPTAIDFYSRAIEKYDKEP-SFFSNRAQ-----AHIKLE 57

Query: 109 KYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
            Y  A +   + +       + +Y   Y+   ++ + ++          K  L+    ++
Sbjct: 58  AYGFAIADASKALEL-----DSNYVKAYWRRALANSAILN--------YKEALKDFKAVI 104

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           +R  N+     A+  +T     +   E E
Sbjct: 105 KREPNNR---DAKLKLTECEKLVRRLEFE 130


>gi|115374915|ref|ZP_01462187.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
 gi|310819227|ref|YP_003951585.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|115368042|gb|EAU67005.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
 gi|309392299|gb|ADO69758.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1]
          Length = 1091

 Score = 43.2 bits (101), Expect = 0.043,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 17/47 (36%)

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
             FP +    +     A   Y  G Y +AA L   +   +P  K+  
Sbjct: 507 TRFPQSPNVMEVRFNIARAYYEDGDYPKAAELFTAFALAHPNHKDAP 553


>gi|183221746|ref|YP_001839742.1| hemolysin [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Paris)']
 gi|189911821|ref|YP_001963376.1| hypothetical protein LBF_2307 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|106879698|emb|CAJ90418.1| putative hemolysin precursor [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|167776497|gb|ABZ94798.1| Conserved hypothetical protein with tetratricopeptide repeat domain
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Ames)']
 gi|167780168|gb|ABZ98466.1| Hemolysin; putative signal peptide [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
          Length = 389

 Score = 43.2 bits (101), Expect = 0.043,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 47/149 (31%), Gaps = 19/149 (12%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D      Y+  V++ A     ++ + K+ E F +     P      ++L   A    + G
Sbjct: 223 DEKVVGEYKDSVFKDAKESFTKKQYFKSIELFQKSLSVNPSPKKEEEALYYIALSYDALG 282

Query: 109 KYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           K  ++ +   + +       N DY       Y  G  Y +        Q   +       
Sbjct: 283 KQTESLTYINKVLN------NSDYSLDQASLYKKGTIYFR--------QGKFEKAAGIFQ 328

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAK 192
            IV++Y  +     A  +     +Q    
Sbjct: 329 TIVDKYPKNQITDKAIAWKKESLDQFTDH 357



 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 55/135 (40%), Gaps = 23/135 (17%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           ++  +Y ++  L ++ ++  P  K  +   Y + +SY  + +            L Y+++
Sbjct: 242 FTKKQYFKSIELFQKSLSVNPSPKKEEEALYYIALSYDALGKQT--------ESLTYINK 293

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           ++    NS Y           +  L  K    G  Y ++G++  A   FQ ++  Y   +
Sbjct: 294 VLN---NSDYSLD--------QASLYKK----GTIYFRQGKFEKAAGIFQTIVDKYPKNQ 338

Query: 225 HAEEAMARLVEAYVA 239
             ++A+A   E+   
Sbjct: 339 ITDKAIAWKKESLDQ 353


>gi|330814392|ref|YP_004358631.1| TPR repeat containing exported protein; Putative periplasmic
           protein contains a protein prenylyltransferase domain
           [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487487|gb|AEA81892.1| TPR repeat containing exported protein; Putative periplasmic
           protein contains a protein prenylyltransferase domain
           [Candidatus Pelagibacter sp. IMCC9063]
          Length = 320

 Score = 43.2 bits (101), Expect = 0.043,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 32/88 (36%), Gaps = 8/88 (9%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
             G YQ+A    +E+I + P         Y    ++   IR + +D         Y+   
Sbjct: 205 KVGDYQKAEIALKEFIEKNPTHSLSGSAQYWFAETFY--IRQLYHD-----AAAAYLDGY 257

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKE 193
            +++  S         + +  N+L  K+
Sbjct: 258 -QKFPKSKKAPQNLLKLGIVMNELGEKD 284


>gi|193215626|ref|YP_001996825.1| tetratricopeptide domain-containing protein [Chloroherpeton
           thalassium ATCC 35110]
 gi|193089103|gb|ACF14378.1| Tetratricopeptide TPR_2 repeat protein [Chloroherpeton thalassium
           ATCC 35110]
          Length = 2169

 Score = 43.2 bits (101), Expect = 0.043,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 72/211 (34%), Gaps = 37/211 (17%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFN--QCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           +R    +Y KA+    E+  + A E     +    +     + K         Y    + 
Sbjct: 136 IRQADLLYNKAIEEFDEKYLAYANESLKYAEILDKYDKGETSEKPT-EPIEPDYG---FD 191

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           +  +L +  I   PES  V   YY     Y + +             +  +  I  +Y +
Sbjct: 192 KVITLYDLIINNMPESPYVVDAYYGKAYIYGENLNKKD-------DAVAILREITRKYPD 244

Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYL------KRGEYVAAIPRFQLVLANYS---- 221
           S Y   +               + I  Y        +  + + +IP ++ VL   S    
Sbjct: 245 SRYTIDSY--------------MLIAEYLFGAPSRQQPRKTIESIPYYKKVLDLVSSKGI 290

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSL 252
            +++ ++++ +L  AY  +  +D+     ++
Sbjct: 291 TSKYYDQSLYKLGWAYFRIGGIDKKNYEEAI 321



 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 57/173 (32%), Gaps = 44/173 (25%)

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           ++  +GE++I  +PESK +                    D+   +      ++ +E + +
Sbjct: 113 KSIEVGEKFIKVFPESKVI--------------------DEIVIRQADLLYNKAIEEF-D 151

Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE-------------YVAAIPRFQLVLA 218
             Y+  A   +            EI   Y K                +   I  + L++ 
Sbjct: 152 EKYLAYANESLKYA---------EILDKYDKGETSEKPTEPIEPDYGFDKVITLYDLIIN 202

Query: 219 NYSDAEHAEEAMARLVEAY-VALALMDEAREVVSLIQERYPQGYWARYVETLV 270
           N  ++ +  +A       Y   L   D+A  ++  I  +YP   +      L+
Sbjct: 203 NMPESPYVVDAYYGKAYIYGENLNKKDDAVAILREITRKYPDSRYTIDSYMLI 255



 Score = 36.2 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 12/86 (13%), Positives = 31/86 (36%)

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
           +        ++     +   YY KR  Y+AA  +++       + + A +A     + YV
Sbjct: 762 KKRRDFAYKRIGESISQQAEYYKKRENYIAAARQYERAARTVPEWKDANQAAVLASDNYV 821

Query: 239 ALALMDEAREVVSLIQERYPQGYWAR 264
                ++A  + + +  +       +
Sbjct: 822 LGGRTEDAVRINNYLINKASDDPSYK 847


>gi|116625694|ref|YP_827850.1| hypothetical protein Acid_6643 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116228856|gb|ABJ87565.1| conserved hypothetical protein [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 133

 Score = 43.2 bits (101), Expect = 0.043,   Method: Composition-based stats.
 Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 3/54 (5%)

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
           A KE+  G YY K+G Y AA  RF+             EA  RL EA   L   
Sbjct: 52  AQKEIRTGNYYFKKGAYRAAAGRFEEATKWNDG---EPEAWLRLGEAEEKLKDP 102


>gi|298206626|ref|YP_003714805.1| TPR-domain containing protein [Croceibacter atlanticus HTCC2559]
 gi|83849256|gb|EAP87124.1| TPR-domain containing protein [Croceibacter atlanticus HTCC2559]
          Length = 1006

 Score = 43.2 bits (101), Expect = 0.043,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 79/241 (32%), Gaps = 23/241 (9%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           +   D    V YQ+  + + +    E N+++A  YF +   +   A    ++   +A   
Sbjct: 413 ESSRDFDNKVAYQKVAFYRGIELYNEDNYTEAKTYFEKSLSEPRDASFTARATYWNAETD 472

Query: 105 YSAGKYQQAASLGEEYITQYPESK---------NVDYVY-----YLVGMSYAQMIRDVPY 150
           Y+   +Q A    +E+      S+         N+ Y Y     Y   +SY +   +   
Sbjct: 473 YNLNNFQDALIGYKEFQGMSAASQTEAYKNLDYNLGYAYFKQKDYEQAISYFKKYSETSS 532

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY-----YLKRGE 205
           D    K     +      +  S Y      Y       L  K  +   +     Y    +
Sbjct: 533 DTSRKKDAFLRLGD--TYFVTSKYWPAMESYNDAI--ALGGKSADYAAFQKAISYGFVNK 588

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
               I      L  +S + + ++A+  L   YVA+    E  +  + +    P+  +   
Sbjct: 589 NDRKIEDLTSFLNQFSRSTYRDDALYELGNTYVAIGNTQEGIKAYNRLIRDVPKSSYVSK 648

Query: 266 V 266
            
Sbjct: 649 A 649



 Score = 42.4 bits (99), Expect = 0.069,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 56/188 (29%), Gaps = 25/188 (13%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              +    N+++A  Y                      +  Y  G++  A S   + +  
Sbjct: 251 GESYFNLGNYAEAVPYLK--EYRGTRGKWNNTDYYQLGYAYYKQGEFDNAISEFNKIVDG 308

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
             ++      YY +  SY ++      DQ+  +  L            S           
Sbjct: 309 --KNAVAQNAYYHLAESYLKL------DQK--QQALNAFKN------ASEMEFDNAIKKD 352

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
              N  A    EIG  Y    +    + R+   L  Y D     E    L+++Y+     
Sbjct: 353 ALLNY-AKLSYEIGNSYESTPK---VLTRY---LETYPDTAEKTELQNLLIDSYITSKNY 405

Query: 244 DEAREVVS 251
            EA E++ 
Sbjct: 406 AEAMELLE 413



 Score = 42.4 bits (99), Expect = 0.076,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 73/219 (33%), Gaps = 33/219 (15%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
              L    +   ++ + + + ++L++ N+  A     +   +  F      +        
Sbjct: 782 KFVLTKERNEFTEQSLAQLSQIYLEKSNYKDAIPVLKRLETEADFPQNIVFAQSNLMKSY 841

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVD-----YVYYLVGMSYAQMIRDVPYDQRATKLML 159
           Y    Y+QA S  E  +     + ++D       + ++  S  +       D+   K   
Sbjct: 842 YQQDNYEQAVSYAENVL----ANSSIDTKVKNDAHIIIARSAMK-----TGDEAKAKTAY 892

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
                 V++         A +Y    +N              K G Y A+    Q +   
Sbjct: 893 AT----VQKTATGKLAAEALYYDAYFKN--------------KAGNYKASNESVQTLAKE 934

Query: 220 YSDA-EHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           YS   E++ +++  + + + AL    +A  ++  I   +
Sbjct: 935 YSGYKEYSVKSLLVMAKNFYALEDAYQATYILENIINNF 973



 Score = 39.7 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 82/236 (34%), Gaps = 48/236 (20%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
              +YE    ++   N  +  + +N+  RD P +    K+LL    + Y++ +  +A   
Sbjct: 610 DDALYELGNTYVAIGNTQEGIKAYNRLIRDVPKSSYVSKALLKQGLIYYNSDRGNEALEK 669

Query: 117 GEEYITQYPESKNVD------------------YVYYLVGMSYAQMIRDVPYD------- 151
            ++    +P +   D                  Y  ++  + +   + D   D       
Sbjct: 670 FKKVAADFPGTAQADQAVKTARLIYVDLGRTSEYANWVKTLDFVN-VTDADLDNTTYEAA 728

Query: 152 -----QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
                Q      L+     +E + N  +   + FY+   + +   KE  I  Y       
Sbjct: 729 EQQYRQENANAALRGFENYLEEFPNGLHALQSHFYLAQLQFKDNKKEESISHY------- 781

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI--QERYPQG 260
                  + VL      E  E+++A+L + Y+  +   +A  V+  +  +  +PQ 
Sbjct: 782 -------KFVLTK-ERNEFTEQSLAQLSQIYLEKSNYKDAIPVLKRLETEADFPQN 829



 Score = 35.5 bits (81), Expect = 7.2,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 46/192 (23%), Gaps = 31/192 (16%)

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            E        F  +     +L        + G  Q+        I   P+S  V      
Sbjct: 593 IEDLTSFLNQFSRSTYRDDALYELGNTYVAIGNTQEGIKAYNRLIRDVPKSSYVSKALLK 652

Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE--- 193
            G+ Y    R            L+   ++   +  +     A     +    L       
Sbjct: 653 QGLIYYNSDRG--------NEALEKFKKVAADFPGTAQADQAVKTARLIYVDLGRTSEYA 704

Query: 194 --------------------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
                                E      ++    AA+  F+  L  + +  HA ++   L
Sbjct: 705 NWVKTLDFVNVTDADLDNTTYEAAEQQYRQENANAALRGFENYLEEFPNGLHALQSHFYL 764

Query: 234 VEAYVALALMDE 245
            +        +E
Sbjct: 765 AQLQFKDNKKEE 776


>gi|78062900|ref|YP_372808.1| TPR repeat-containing protein [Burkholderia sp. 383]
 gi|77970785|gb|ABB12164.1| TPR repeat protein [Burkholderia sp. 383]
          Length = 292

 Score = 43.2 bits (101), Expect = 0.044,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 46/158 (29%), Gaps = 22/158 (13%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
           FAL     +      G      +   + S      Q E+   A   L   N   A   + 
Sbjct: 9   FALAAVLPV---LAGGCGAPGIQTRPVLSHKSDDPQAEL-RIADSALAGGNVDLASTLYE 64

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE--SKNVDYVYYLVGM 139
           +     P +  AR   L    V Y AG  ++A  L +E   Q P             +G+
Sbjct: 65  KVLAKHPDSLAAR---LGLGDVNYRAGDLERARILYDEAQRQAPAELGP-------RLGL 114

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           +       V   QR      Q    ++    N P    
Sbjct: 115 A------RVALRQRRLDEAAQRYRDLLAAQPNHPLAAE 146


>gi|328874887|gb|EGG23252.1| SET domain-containing protein [Dictyostelium fasciculatum]
          Length = 909

 Score = 43.2 bits (101), Expect = 0.044,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 40/133 (30%), Gaps = 12/133 (9%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           RY  E Y KA    ++  + +A E +       P+      + L  A V  +   Y++A 
Sbjct: 117 RYLEEAYSKAAEEYEKGEYQQALERYFWIINKVPYES---AAYLQRAVVYETIHSYEEAI 173

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
              ++ I+    S  +   Y L G S     +                   +  Y  +  
Sbjct: 174 QDCDKVISMSNSSDQIAEAYMLKGHSLMGRTK--------FSEAATAFKDSL-MYVENEE 224

Query: 175 VKGARFYVTVGRN 187
           V           +
Sbjct: 225 VMELMKKALSLVD 237


>gi|162449758|ref|YP_001612125.1| hypothetical protein sce1487 [Sorangium cellulosum 'So ce 56']
 gi|161160340|emb|CAN91645.1| putative membrane protein [Sorangium cellulosum 'So ce 56']
          Length = 298

 Score = 43.2 bits (101), Expect = 0.044,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 45/137 (32%), Gaps = 10/137 (7%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           +        +++ +A    +     +A E +    R F  +  A  SL+    +    G 
Sbjct: 169 APPTASTAEQLFREANDARRAGRSRRAIELYRALQRGFASSPEATLSLVSLGGLLLHDGS 228

Query: 110 YQQAASLGEEYITQY-PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
              A +  + Y+    P         Y  G    + +R +           Q   R++  
Sbjct: 229 PAAALAQFDRYLGVAGPR-PLAVEALYGRG----RALRALGR----AGDEAQAWRRLLRE 279

Query: 169 YTNSPYVKGARFYVTVG 185
           +  SPYV+ AR  +   
Sbjct: 280 HPGSPYVEHARRRLAEL 296


>gi|241952765|ref|XP_002419104.1| serine/threonine-protein phosphatase T, putative [Candida
           dubliniensis CD36]
 gi|223642444|emb|CAX42689.1| serine/threonine-protein phosphatase T, putative [Candida
           dubliniensis CD36]
          Length = 553

 Score = 43.2 bits (101), Expect = 0.044,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 46/160 (28%), Gaps = 51/160 (31%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQ---CSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +K    LK+  + +A E + +      +   F   + ++ +           Y  A    
Sbjct: 13  DKGNNLLKQHKYDEAIEAYTKAIEIDSENAIF--YSNRAQVQI-----KLENYGLAIQDC 65

Query: 118 E-------EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           +        ++            YY  G+S   +++         K  L+    I+++  
Sbjct: 66  DLAIKLDNNFLK----------AYYRKGVSLMAILKH--------KQALENFKFILKKLP 107

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
           N               N            YLKR  +  AI
Sbjct: 108 NDKLTLENYK---QCTN------------YLKRQAFEKAI 132


>gi|255574548|ref|XP_002528185.1| fk506 binding protein, putative [Ricinus communis]
 gi|223532397|gb|EEF34192.1| fk506 binding protein, putative [Ricinus communis]
          Length = 618

 Score = 43.2 bits (101), Expect = 0.044,   Method: Composition-based stats.
 Identities = 20/153 (13%), Positives = 43/153 (28%), Gaps = 25/153 (16%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF----PFAGVARKSL------ 97
           +D  T +    ++        KE  F  A   + +  R+F    P      K        
Sbjct: 388 MDFPTIMGEAEKIRNTGNRLYKEGKFELAKAKYEKVLREFNHVNPQDDEEGKVFVDTRNL 447

Query: 98  --LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
             L  A      G+ +++     + +   P         Y  GM+Y              
Sbjct: 448 LNLNLAACYLKMGECKKSIEYCNKVLDANPAHAK---ALYRRGMAYMTD--------GDF 496

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +   +    +++   +S     A   +   + +
Sbjct: 497 EEARRDFEMMMKGDKSSE--ADAMAALQKLKQK 527


>gi|206891167|ref|YP_002249681.1| hypothetical protein THEYE_A1891 [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|206743105|gb|ACI22162.1| hypothetical protein THEYE_A1891 [Thermodesulfovibrio yellowstonii
           DSM 11347]
          Length = 349

 Score = 43.2 bits (101), Expect = 0.044,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 32/68 (47%)

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
               AA+  + L+L  Y +    E ++         L L  +A++ +   ++ YP+G + 
Sbjct: 276 RNPEAALAEYLLILEEYPEIPQKETSLYLTGMTLYELGLKKQAKQRLYQYKKTYPEGKYI 335

Query: 264 RYVETLVK 271
             VET+++
Sbjct: 336 TNVETIIR 343


>gi|119512967|ref|ZP_01632028.1| serine/threonine kinase [Nodularia spumigena CCY9414]
 gi|119462380|gb|EAW43356.1| serine/threonine kinase [Nodularia spumigena CCY9414]
          Length = 713

 Score = 43.2 bits (101), Expect = 0.044,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 65/197 (32%), Gaps = 20/197 (10%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           Y           F  A + +++  +  P  +     +S ++         +Y QA    +
Sbjct: 516 YSLGNALFNLNRFDNALKAYDKAVQYRPKFYPAWFSRSNILII-----LRRYPQAIESFD 570

Query: 119 EYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY--TNSPYV 175
           + I   P     DY  +Y  G +  Q  R         K      +     Y   NS Y+
Sbjct: 571 QAIKHNPN----DYQAWYSRGWALHQSQRYEEAIASYNKAAAIKRNDYQIWYNLGNSQYI 626

Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
                      ++    +      +  RG  +  + R++  + +Y      ++A+     
Sbjct: 627 LQKYQQAIASYDKAVRYQTNHAESWYSRGNALLNLQRYKEAIDSY------DQAIKYKPN 680

Query: 236 AYVALALMDEAREVVSL 252
              A+   +EA++ +S+
Sbjct: 681 YRQAINARNEAQKELSV 697


>gi|94501765|ref|ZP_01308278.1| hypothetical protein RED65_07514 [Oceanobacter sp. RED65]
 gi|94426073|gb|EAT11068.1| hypothetical protein RED65_07514 [Oceanobacter sp. RED65]
          Length = 947

 Score = 43.2 bits (101), Expect = 0.044,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 61/193 (31%), Gaps = 23/193 (11%)

Query: 65  VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
           +  L +++F KA +Y+      FP      + L   A   +  G++ QAA    +   ++
Sbjct: 391 LKELADKSFDKATQYYGNFVAVFPQDKKVPEMLYQKADAHFEYGEFDQAAKDYYQVAYRH 450

Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL-------MLQYMSRIVERYTNSPYVKG 177
              K      Y   ++Y + I  +   +   K         +  M R  + Y N      
Sbjct: 451 KGYKKSSEAAYASIIAYRKHIDGLELAEADVKTLDKWRAGSVDAMLRFAQVYPNDKRAVA 510

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA--EHAEEAMARLVE 235
                               +Y  +   Y  AI     +L N   +  +   EA   L  
Sbjct: 511 VLS--------------NAAQYLFELKAYDRAIEVANGLLENKKRSGRDIQREAYGILAH 556

Query: 236 AYVALALMDEARE 248
           +Y  L     A+ 
Sbjct: 557 SYFQLGQYQLAQN 569



 Score = 41.3 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 5/59 (8%)

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           Y +R     AI  +  +L  Y ++    E + +L +AY        AR+++  + +R+P
Sbjct: 97  YYRR-----AIASYVDILEKYPNSPDNAEVLYQLAKAYDMEGQPKNARKMLERLVDRHP 150



 Score = 40.1 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 28/77 (36%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           +   + +A   +      +P +    + L   A      G+ + A  + E  + ++P  +
Sbjct: 94  EAGYYRRAIASYVDILEKYPNSPDNAEVLYQLAKAYDMEGQPKNARKMLERLVDRHPYYE 153

Query: 129 NVDYVYYLVGMSYAQMI 145
            +   Y+ +G  Y    
Sbjct: 154 RISEAYFRLGDIYFSSD 170


>gi|226467007|emb|CAX75984.1| hypothetical protein [Schistosoma japonicum]
          Length = 431

 Score = 43.2 bits (101), Expect = 0.045,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 51/151 (33%), Gaps = 26/151 (17%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF----AGVARK--------SLL 98
              + Y   + EKA  FLK+  F  A E + +   +  +        +K          L
Sbjct: 253 PERIAYANTLKEKANNFLKDSKFDSAIELYKRLDDELQYVVANGPTEQKELSGVTVAVQL 312

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
             A V     K  +     ++ +  + +++      + +G ++           +  +  
Sbjct: 313 NLALVYLKLCKPDKCIEFCKKVLDNFSDNEK---ALFRIGQAHLLR--------KDHEEA 361

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
           + Y  RIV +  N+     A   V +   ++
Sbjct: 362 VVYFKRIVTKNPNN---ASAVKQVQICEEEI 389


>gi|226467003|emb|CAX75982.1| hypothetical protein [Schistosoma japonicum]
          Length = 431

 Score = 43.2 bits (101), Expect = 0.045,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 51/151 (33%), Gaps = 26/151 (17%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF----AGVARK--------SLL 98
              + Y   + EKA  FLK+  F  A E + +   +  +        +K          L
Sbjct: 253 PERIAYANTLKEKANNFLKDSKFDSAIELYKRLDDELQYVVANGPTEQKELSGVTVAVQL 312

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
             A V     K  +     ++ +  + +++      + +G ++           +  +  
Sbjct: 313 NLALVYLKLCKPDKCIEFCKKVLDNFSDNEK---ALFRIGQAHLLR--------KDHEEA 361

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
           + Y  RIV +  N+     A   V +   ++
Sbjct: 362 VVYFKRIVTKNPNN---ASAVKQVQICEEEI 389


>gi|56757962|gb|AAW27121.1| SJCHGC01391 protein [Schistosoma japonicum]
 gi|226471568|emb|CAX70865.1| hypothetical protein [Schistosoma japonicum]
          Length = 431

 Score = 43.2 bits (101), Expect = 0.045,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 51/151 (33%), Gaps = 26/151 (17%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF----AGVARK--------SLL 98
              + Y   + EKA  FLK+  F  A E + +   +  +        +K          L
Sbjct: 253 PERIAYANTLKEKANNFLKDSKFDSAIELYKRLDDELQYVVANGPTEQKELSGVTVAVQL 312

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
             A V     K  +     ++ +  + +++      + +G ++           +  +  
Sbjct: 313 NLALVYLKLCKPDKCIEFCKKVLDNFSDNEK---ALFRIGQAHLLR--------KDHEEA 361

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
           + Y  RIV +  N+     A   V +   ++
Sbjct: 362 VVYFKRIVTKNPNN---ASAVKQVQICEEEI 389


>gi|33862568|ref|NP_894128.1| TPR repeat-containing protein [Prochlorococcus marinus str. MIT
           9313]
 gi|33640681|emb|CAE20470.1| TPR repeat [Prochlorococcus marinus str. MIT 9313]
          Length = 727

 Score = 43.2 bits (101), Expect = 0.045,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 26/85 (30%), Gaps = 18/85 (21%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY-------SA 107
           +   E+ E     L+ ++F  A + FN+     P+           A   Y         
Sbjct: 53  KSADELMESGKSKLENKDFHGAIDDFNKLLDSHPYN----------ADSYYNRGLAKAKL 102

Query: 108 GKYQQAASLGEEYITQYPESKNVDY 132
           G  Q A     + I   P    + Y
Sbjct: 103 GNNQGAIEDYSKAIEINPLH-AIAY 126


>gi|327485391|gb|AEA79797.1| TPR domain protein in aerotolerance operon [Vibrio cholerae
           LMA3894-4]
          Length = 612

 Score = 42.8 bits (100), Expect = 0.045,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 42/115 (36%), Gaps = 10/115 (8%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
           F+L + F +++     W    S  +  D      +  E Y +A    ++  +  A  Y+ 
Sbjct: 323 FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMHMFNNEQYAQAAEAFRDPRWQGAARYYA 379

Query: 82  QCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           +          ++ +          A     AG+ Q+A  L E+ + Q P  ++ 
Sbjct: 380 K-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLYEQVLKQEPNHQDA 433


>gi|302840537|ref|XP_002951824.1| hypothetical protein VOLCADRAFT_81612 [Volvox carteri f.
           nagariensis]
 gi|300263072|gb|EFJ47275.1| hypothetical protein VOLCADRAFT_81612 [Volvox carteri f.
           nagariensis]
          Length = 650

 Score = 42.8 bits (100), Expect = 0.045,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 8/87 (9%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAG 108
            + D +Y + +Y      +K+Q F++A  +   Q          +R +L +  +  Y  G
Sbjct: 10  PIADGQYTQVIY----TLIKDQKFTEAISHLQYQLQARGNI-PESRAALSLLGYCYYYTG 64

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYY 135
           +Y  A+ + E+ +T YP ++  DY  Y
Sbjct: 65  QYDLASQMYEQLVTLYPNNE--DYKLY 89


>gi|297277414|ref|XP_002801351.1| PREDICTED: serine/threonine-protein phosphatase 5 [Macaca mulatta]
          Length = 486

 Score = 42.8 bits (100), Expect = 0.045,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 45/141 (31%), Gaps = 30/141 (21%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           +   E+  +A  + K +++  A ++++Q     P           + +  Y+ G   +A 
Sbjct: 26  KRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS---------NAIYYGYALGDATRAI 76

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
            L ++YI            YY    S   +           +  L+    +V+   +   
Sbjct: 77  ELDKKYIK----------GYYRRAASNMAL--------GKFRAALRDYETVVKVKPHDK- 117

Query: 175 VKGARFYVTVGRNQLAAKEVE 195
              A+         +  K  E
Sbjct: 118 --DAKMKYQECNKIVKQKAFE 136


>gi|256082557|ref|XP_002577521.1| heat shock protein 70 [Schistosoma mansoni]
 gi|238662843|emb|CAZ33759.1| heat shock protein 70 (hsp70)-interacting protein, putative
           [Schistosoma mansoni]
          Length = 356

 Score = 42.8 bits (100), Expect = 0.045,   Method: Composition-based stats.
 Identities = 18/137 (13%), Positives = 46/137 (33%), Gaps = 25/137 (18%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           +A+  + + + + A + F +  +  P +    AR++            K   A +  ++ 
Sbjct: 107 EAMAKMSDGDLTGAVDLFTEAIKLNPQSSLFHARRAS-----CFVRMKKPSHAIADCDKA 161

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           I+  P+S    Y +   G +  +MI          +   Q +   ++      Y   A  
Sbjct: 162 ISLNPDSAQ-PYKW--RGFAN-KMI-------GNWEAAYQDLQTSLKL----DYTDDANE 206

Query: 181 YVTVG---RNQLAAKEV 194
            +        ++    +
Sbjct: 207 AIKEIEPKHKRIFEHNM 223


>gi|154492257|ref|ZP_02031883.1| hypothetical protein PARMER_01891 [Parabacteroides merdae ATCC
           43184]
 gi|154087482|gb|EDN86527.1| hypothetical protein PARMER_01891 [Parabacteroides merdae ATCC
           43184]
          Length = 269

 Score = 42.8 bits (100), Expect = 0.045,   Method: Composition-based stats.
 Identities = 10/69 (14%), Positives = 22/69 (31%), Gaps = 3/69 (4%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++A +   ++++ KA E +    +       A           Y   K   A    E  +
Sbjct: 45  KEAEVAYTKEDYGKAIELYEGLLKTH--GESAE-IYYNLGNAYYKENKIAPAILNYERAL 101

Query: 122 TQYPESKNV 130
              P   ++
Sbjct: 102 LLDPGDGDI 110


>gi|145473661|ref|XP_001462494.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124430334|emb|CAK95121.1| unnamed protein product [Paramecium tetraurelia]
          Length = 369

 Score = 42.8 bits (100), Expect = 0.045,   Method: Composition-based stats.
 Identities = 17/151 (11%), Positives = 54/151 (35%), Gaps = 39/151 (25%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-----------------KSLLMS 100
           +++  +A    KEQ + +A + +         + + +                 +  L  
Sbjct: 170 KQLKSQATQLFKEQKYKEAIQVYKNI-----HSKIGQIPKALKNTMTQEQKTFFQVELSR 224

Query: 101 AF-----VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
            +           +Y +A    ++ +  + ++      Y++   ++ +       DQ++ 
Sbjct: 225 VYSNQAICHLQLKEYAKAIETSKQAMNDWDQNFK---AYFIYAKAHFE------RDQKS- 274

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
              L+Y  +I++++ N   V   + Y+   +
Sbjct: 275 -EALEYFQQIIQKFPN-EDVTEVQKYLDKCK 303


>gi|288925073|ref|ZP_06419009.1| TPR domain protein [Prevotella buccae D17]
 gi|288338263|gb|EFC76613.1| TPR domain protein [Prevotella buccae D17]
          Length = 269

 Score = 42.8 bits (100), Expect = 0.046,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 47/128 (36%), Gaps = 15/128 (11%)

Query: 72  NFSKAYEYFNQ-CSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           N+++A +Y ++   +   F+    +S     +A   +  G+Y +A  L E+ +    E++
Sbjct: 94  NYAEAIQYLDKAIPQLSAFSPH-ERSFYYWSNAESHFLLGRYDEAIPLYEKMLNLCYENE 152

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
             D  +Y +G  +              +       +    Y  + Y    +  +    N 
Sbjct: 153 KAD-AFYRLGFCHMFA--------EDWQKACDNYKQAAHYY--TYYRPEEQARLVQINNM 201

Query: 189 LAAKEVEI 196
           +A  E  I
Sbjct: 202 IAGCEKHI 209


>gi|254424837|ref|ZP_05038555.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC
           7335]
 gi|196192326|gb|EDX87290.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC
           7335]
          Length = 981

 Score = 42.8 bits (100), Expect = 0.046,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 81/252 (32%), Gaps = 25/252 (9%)

Query: 16  AYQLYKFALTIFFSIAVC--FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF 73
              L K  LT+  S A      + W    +       + ++   +    +          
Sbjct: 1   MTSLSKPLLTLLASSASVSMLTILWATSWTTSTIARPIEEIHILQ---NQPEASHSSNRE 57

Query: 74  SKAYEYFNQCSRDFPFAGV--ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           S+A   F Q   D+       +R+    +A + Y  G Y + A+           S++  
Sbjct: 58  SEAERLFQQGEADYQIGAYQDSRQHWTQAAAIYYEVGNYARLATTFNRIAASLQASEHYP 117

Query: 132 YV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
               YY  G   AQ + D+     A    +  +  +  +Y      + A          L
Sbjct: 118 MALEYYQQGFVTAQHVDDLQESVTAL-DGVGTIHTLQHQY---EEAQDALELSLAISRSL 173

Query: 190 AAKEVEI------GRYYLKRGEYVAAIPRFQLVLA------NYSDAEHAEEAMARLVEAY 237
            A+E+E       G  Y  RG Y  AI  +Q  L         S++    +A+  L  A+
Sbjct: 174 GAQEMEAQTLLILGSVYSDRGHYDQAIELYQQSLDIVQSIGEVSESSVEPQALTLLGAAF 233

Query: 238 VALALMDEAREV 249
                 D+A   
Sbjct: 234 GDKGDYDKAMSY 245


>gi|17230316|ref|NP_486864.1| hypothetical protein alr2824 [Nostoc sp. PCC 7120]
 gi|17131918|dbj|BAB74523.1| alr2824 [Nostoc sp. PCC 7120]
          Length = 732

 Score = 42.8 bits (100), Expect = 0.046,   Method: Composition-based stats.
 Identities = 17/135 (12%), Positives = 46/135 (34%), Gaps = 11/135 (8%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           E Y++     + +++ +A + F     ++   +  A + L+     +Y+   Y+ A +  
Sbjct: 456 EYYKQGHAAYQVRDYKQAVDNFTHAIQQE---SANA-RVLVNRGNARYNLKDYEGALADY 511

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
              +   P        +   G S   +        +  +L +   +  ++    +     
Sbjct: 512 TAALQINPREIK---AFVNRGNSRLMLAEYSNDPDQQYRLAITDFNHALKL---NEKEAE 565

Query: 178 ARFYVTVGRNQLAAK 192
           A     + R Q+A  
Sbjct: 566 AYIRRGIVRTQMAKY 580


>gi|268325019|emb|CBH38607.1| conserved hypothetical protein, containing tetratricopeptide
           repeats [uncultured archaeon]
          Length = 425

 Score = 42.8 bits (100), Expect = 0.046,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 41/113 (36%), Gaps = 18/113 (15%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            + + +   + + +A E FN+     P +  A               +Y++A     + I
Sbjct: 274 NRGLTYNNLKQYERAIEDFNKTIELDPNSAAAYN---NRGNAYRKLEEYERAIEDFNKTI 330

Query: 122 TQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
                  + +Y   YY  G++Y         D +  +  ++  ++ +E   NS
Sbjct: 331 EL-----DSNYAGSYYNRGLTYD--------DLKQYERAIEDFNKTIELDPNS 370



 Score = 40.5 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 23/175 (13%), Positives = 57/175 (32%), Gaps = 30/175 (17%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            + + +   + + +A E FN+     P +  A            +  +Y++A     + I
Sbjct: 206 NRGLTYDNLKQYERAIEDFNKTIELDPNSAAAYN---NRGLTYDNLKQYERAIEDFNKTI 262

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              P      + Y   G++Y  +        +  +  ++  ++ +E   NS     A   
Sbjct: 263 ELIPNHT---FAYNNRGLTYNNL--------KQYERAIEDFNKTIELDPNS---AAAYNN 308

Query: 182 VTVGRNQLAAKEVEIGRY-------------YLKRGEYVAAIPRFQLVLANYSDA 223
                 +L   E  I  +             Y  RG     + +++  + +++  
Sbjct: 309 RGNAYRKLEEYERAIEDFNKTIELDSNYAGSYYNRGLTYDDLKQYERAIEDFNKT 363


>gi|261212660|ref|ZP_05926944.1| TPR domain protein in aerotolerance operon [Vibrio sp. RC341]
 gi|260837725|gb|EEX64402.1| TPR domain protein in aerotolerance operon [Vibrio sp. RC341]
          Length = 628

 Score = 42.8 bits (100), Expect = 0.047,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 43/120 (35%), Gaps = 11/120 (9%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
             +  +     I        E  +S  +  D      ++ + Y +A    ++  +  A  
Sbjct: 316 FRRGVIFTLLLIVGTHFPVQEASASPWLNQDQQAMRAFEAKQYSQAAETFRDPKWQGAAR 375

Query: 79  YFNQCSRDFPFA--GVAR------KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           Y+ +   D+P A    +R      ++    A     AG + +A  L E+ + Q P  ++ 
Sbjct: 376 YYAK---DYPGAIEAYSRIENPDLETQYNLANAYAQAGNFPKARELYEQVLKQQPNHQDA 432


>gi|226227016|ref|YP_002761122.1| hypothetical protein GAU_1610 [Gemmatimonas aurantiaca T-27]
 gi|226090207|dbj|BAH38652.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 220

 Score = 42.8 bits (100), Expect = 0.047,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 26/66 (39%), Gaps = 1/66 (1%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
            +    +Y +A     +  F +A +   + +  +      +++ ++ A V Y   KY + 
Sbjct: 59  EKASAALY-EAQAPFAQGKFDEAQKALEKVTNQYASTSSGQQAAVLLAQVLYEQKKYDEG 117

Query: 114 ASLGEE 119
               E+
Sbjct: 118 IKALEK 123


>gi|114648903|ref|XP_001147579.1| PREDICTED: intraflagellar transport 88 homolog isoform 2 [Pan
           troglodytes]
          Length = 680

 Score = 42.8 bits (100), Expect = 0.047,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 85/303 (28%), Gaps = 64/303 (21%)

Query: 2   SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60
                +A+ I +    +  +       +++  + +G +  Q+S    +   +D      +
Sbjct: 321 QKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 380

Query: 61  YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
             K        ++ KA E++      D   +     +L           +  +A      
Sbjct: 381 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 433

Query: 120 YITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKL--------- 157
           ++  +   +N   V Y +   Y              Q++  +P D +             
Sbjct: 434 FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREG 493

Query: 158 ----MLQYMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEI 196
                 QY       +               ++ + + A  Y     + +      ++ +
Sbjct: 494 DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMV 553

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEAREVVSL 252
              + + G         Q  L  Y D         E +  LV     L L D A+E    
Sbjct: 554 ASCFRRSGN-------SQKALDTYKDTHRKFPENVECLRFLVRLCTDLGLKD-AQEYARK 605

Query: 253 IQE 255
           ++ 
Sbjct: 606 LKR 608



 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 66/222 (29%), Gaps = 67/222 (30%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117
            KAV +L+++++++A E      +    + V   +    + + Y    + QA+S      
Sbjct: 313 NKAVTYLRQKDYNQAVEILKVLEKKD--SRVKSAAATNLSALYYMGKDFAQASSYADIAV 370

Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147
             + Y    P    +K      N DY                     Y +G++Y ++ R 
Sbjct: 371 NSDRY---NPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNR- 426

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
                      L    ++     NS                 A    +I   Y       
Sbjct: 427 -------LDEALDCFLKLHAILRNS-----------------AEVLYQIANIYELMENPS 462

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
            AI     V++           +++L E Y       +A + 
Sbjct: 463 QAIEWLMQVVSVIPTDPQV---LSKLGELYDREGDKSQAFQY 501


>gi|78224245|ref|YP_385992.1| peptidase S1C, HrtA/DegP2/Q/S [Geobacter metallireducens GS-15]
 gi|78195500|gb|ABB33267.1| Peptidase S1C, HrtA/DegP2/Q/S [Geobacter metallireducens GS-15]
          Length = 772

 Score = 42.8 bits (100), Expect = 0.047,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 24/78 (30%), Gaps = 16/78 (20%)

Query: 71  QNFSKAYEYFNQCSRDFP----FAGVARKSLLMSAFVQY-SAGKYQQAASLGEEYITQYP 125
           + +  A   +    +  P    F     ++        Y     Y++A +     I   P
Sbjct: 540 KKYDDAVRIYTDLIKQHPKRLIF--YNGRAE------YYAKLKNYKKAIADYTTCIKLNP 591

Query: 126 ESKNVDYVYYLVGMSYAQ 143
            S+   Y Y L    Y +
Sbjct: 592 NSE---YNYNLRANCYYE 606



 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 23/200 (11%), Positives = 57/200 (28%), Gaps = 50/200 (25%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKS--LLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
           N  KA + +    +  P     +K+   +   +       + +     ++ ++  P +++
Sbjct: 439 NADKAIKLYETAIQLNP-----KKADYYVEKGWQHKIKNDFSKVLDCAKKALSISPNNED 493

Query: 130 VDYVY----------------YLVGMS-------YAQMIRDVPYDQRATKLMLQYMSRIV 166
             Y+Y                Y  G+S           I  V    +     ++  + ++
Sbjct: 494 AHYLYGSYYEENNKYDKALEYYTKGLSVSDNVTFGYFYIDGVMEKTKKYDDAVRIYTDLI 553

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
           +++            +     +          YY K   Y  AI  +   +    ++E+ 
Sbjct: 554 KQHP---------KRLIFYNGR--------AEYYAKLKNYKKAIADYTTCIKLNPNSEYN 596

Query: 227 EEAMARLVEAYVALALMDEA 246
                     Y       EA
Sbjct: 597 Y---NLRANCYYEDGKKSEA 613


>gi|85716150|ref|ZP_01047125.1| hypothetical protein NB311A_05590 [Nitrobacter sp. Nb-311A]
 gi|85696983|gb|EAQ34866.1| hypothetical protein NB311A_05590 [Nitrobacter sp. Nb-311A]
          Length = 447

 Score = 42.8 bits (100), Expect = 0.047,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 53/170 (31%), Gaps = 33/170 (19%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
           S+ +         +++      ++     ++ Y+     +  +N S            F 
Sbjct: 11  SVLLTMTACCSGAAAQSTTSSPISAASAVQQDYDALFQQM-YKNPSD-------LEVSF- 61

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
               A +++          G Y+ A    E  +   P   N+  V   +G+ Y ++    
Sbjct: 62  --KFAEQAV--------KRGDYEAAIGALERMLFFNP---NLPRVKLELGVLYFKL---- 104

Query: 149 PYDQRATKLMLQYMSRIVE--RYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
                + +L   Y    ++     +       R Y+T    +LA  E  +
Sbjct: 105 ----GSYELARSYFQEAIKAADAPDDIRA-QVRAYLTEIDRRLARYEFSV 149


>gi|312114027|ref|YP_004011623.1| peptidase C14 caspase catalytic subunit p20 [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311219156|gb|ADP70524.1| peptidase C14 caspase catalytic subunit p20 [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 515

 Score = 42.8 bits (100), Expect = 0.047,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 58/193 (30%), Gaps = 31/193 (16%)

Query: 69  KEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
            ++ +  A   ++   R  P  ++   ++      +      +  +A +   E I  Y  
Sbjct: 66  DDKKYDLAIADYSNAIRLAPKDYSAYYQR-----GYAYAMKEERDRAIADYSEAIRIYST 120

Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
           +  +   YY  G+ Y +M  D+          +    R+ +  +N               
Sbjct: 121 NNGI---YYRRGIVYKEM-GDLDRALADLNEAI----RLEQDSSNYTERAEIYAKKGELD 172

Query: 187 NQLAAKEVEI-------------GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
             +A     I             G  Y KRG+   AI  F  V++     +    A    
Sbjct: 173 RAIADYSEAIRLNPKYDNLYKWRGEIYEKRGDLDHAIADFSKVISLDPKYDSYYRAR--- 229

Query: 234 VEAYVALALMDEA 246
            + Y      D A
Sbjct: 230 GDIYEKKGDYDRA 242



 Score = 35.5 bits (81), Expect = 7.5,   Method: Composition-based stats.
 Identities = 23/173 (13%), Positives = 53/173 (30%), Gaps = 34/173 (19%)

Query: 60  VYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
            Y + +++ +  +  +A          +   +    ++     +     G+  +A +   
Sbjct: 125 YYRRGIVYKEMGDLDRALADLNEAIRLEQDSSNYTERAE---IYA--KKGELDRAIADYS 179

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           E I   P+  N+   Y   G  Y +               +   S+++       Y    
Sbjct: 180 EAIRLNPKYDNL---YKWRGEIYEKR--------GDLDHAIADFSKVISLDP--KYDSYY 226

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
           R                 G  Y K+G+Y  AI  ++  +    +   A + +A
Sbjct: 227 RAR---------------GDIYEKKGDYDRAIADYREAVRLDPNYSTARKRLA 264


>gi|303280501|ref|XP_003059543.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226459379|gb|EEH56675.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 1060

 Score = 42.8 bits (100), Expect = 0.047,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 46/127 (36%), Gaps = 12/127 (9%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-KSLLMSAFVQYSAGKYQQAASLGEEYIT 122
               LKE  F  A   ++      P +   + + L   +   Y  G+Y +A     E  +
Sbjct: 181 GNAALKEGRFEDALAIYDAAP---PPSEERKNRYLTNRSHALYELGRYDEAVDAARECTS 237

Query: 123 QYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
             P     DYV  ++ +G +  + +     +  A +      ++ + R   + ++K A  
Sbjct: 238 LDP-----DYVKGWFWLGKA-LEAVAIDSKNLEAARRAYNAFAQCLRRDPENVHLKEAAE 291

Query: 181 YVTVGRN 187
                R+
Sbjct: 292 RTREFRD 298


>gi|195126359|ref|XP_002007638.1| GI13051 [Drosophila mojavensis]
 gi|193919247|gb|EDW18114.1| GI13051 [Drosophila mojavensis]
          Length = 1205

 Score = 42.8 bits (100), Expect = 0.047,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 53/141 (37%), Gaps = 24/141 (17%)

Query: 133 VYYLVGMSYAQM------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------R 179
            Y L+ +    +       RD   +++  +  L    +++     + +           +
Sbjct: 600 AYSLIALGNFSLQTLHQPSRDKEKERKHQEKALAIFKQVLRTDPRNIWATNGIGAVLAHK 659

Query: 180 FYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
             V   R+  A  +E         + I   Y+++ +Y++AI  ++  +  +    +  E 
Sbjct: 660 GCVIEARDIFAQVREATADFCDVWLNIAHIYVEQKQYISAIQMYENCMKKFFKHNNV-EV 718

Query: 230 MARLVEAYVALALMDEAREVV 250
           M  L  AY+    + EA+ V+
Sbjct: 719 MQYLARAYLRANKLVEAKAVL 739


>gi|75906644|ref|YP_320940.1| hypothetical protein Ava_0419 [Anabaena variabilis ATCC 29413]
 gi|75700369|gb|ABA20045.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
          Length = 224

 Score = 42.8 bits (100), Expect = 0.047,   Method: Composition-based stats.
 Identities = 18/126 (14%), Positives = 42/126 (33%), Gaps = 11/126 (8%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
            Y+   F L++         +    Q    V   +  +++    + E     +   +++ 
Sbjct: 1   MYKHISFVLSVLLLGGGTATIPTIAQGQVLVVQANNAELKR---LLEDGKRLVDAGDYNG 57

Query: 76  AYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
           A   + Q +   P     R + +     ++    G +Q A +     I   P + +  Y 
Sbjct: 58  AIAVYQQAATMEP-----RNARIHSGIGYLHAQQGNFQAALASYRRAIAINPNNSDFFYA 112

Query: 134 Y-YLVG 138
             Y+ G
Sbjct: 113 VGYIKG 118


>gi|253700870|ref|YP_003022059.1| hypothetical protein GM21_2252 [Geobacter sp. M21]
 gi|251775720|gb|ACT18301.1| TPR repeat-containing protein [Geobacter sp. M21]
          Length = 188

 Score = 42.8 bits (100), Expect = 0.047,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 47/154 (30%), Gaps = 34/154 (22%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +   T    + +  L   +             +     + +E  VL   E  + +A E
Sbjct: 1   MRQATGTYVMLLLMAGLATGDIDPKPQRQPIDQEEYLEAEDWFEAGVLMNSEGRYGEAAE 60

Query: 79  YF--------------------NQCSRDFPFA------GVARKSLLMSAFVQ-----YSA 107
            F                       + D+P A       +A    L  AF       +  
Sbjct: 61  AFSKSIALSPGNAVSWLNLGTAQALTADYPHAIESLKRSIALDPELALAFSNLGEVCFRT 120

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
            +Y++A       +T +P + N     Y +G+S+
Sbjct: 121 DRYEEAVEAYTSLLTLWPGNAN---ALYKLGLSH 151


>gi|171059547|ref|YP_001791896.1| hypothetical protein Lcho_2866 [Leptothrix cholodnii SP-6]
 gi|170776992|gb|ACB35131.1| conserved hypothetical protein [Leptothrix cholodnii SP-6]
          Length = 224

 Score = 42.8 bits (100), Expect = 0.047,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 25/58 (43%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +Y++    +      +A + F      +P    A ++ L++A VQ+  G+   A +  
Sbjct: 58  MYDEVERAVLAGEADRAAKVFADLKDRYPGTTFAEQAALLTAQVQFDKGQIDAAQATL 115


>gi|20093095|ref|NP_619170.1| TPR domain-containing protein [Methanosarcina acetivorans C2A]
 gi|19918428|gb|AAM07650.1| TPR-domain containing protein [Methanosarcina acetivorans C2A]
          Length = 1079

 Score = 42.8 bits (100), Expect = 0.047,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 36/112 (32%), Gaps = 14/112 (12%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y +        +F  A   ++Q     P    A        F      KYQ+A +  ++
Sbjct: 850 MYRQGKALEAMGDFEAAIACYDQILALDPKNIDAIN---NKGFAYAKMEKYQEAIASYDK 906

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            I   P +      +Y  G +   +  ++          ++   ++V    +
Sbjct: 907 AIEYAPNN---ATAWYFKGCANFAISSNI--------AAVESFDKVVTLKPD 947



 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 40/106 (37%), Gaps = 16/106 (15%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGK 109
           +  Y +  Y K     K   +  A + F++      ++  A   +      AF     G 
Sbjct: 466 NSEYAKVWYRKGYDSSKFGQYKDAAKSFDKAVNLDDNYTLAWYGK------AFALAKTGD 519

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           Y++A    E+ +   P+S  +   +Y  G+    ++  +   Q A+
Sbjct: 520 YEEALVCYEKVLAAAPDSAEI---WYNKGL----LLDQLERHQEAS 558


>gi|114321630|ref|YP_743313.1| peptidase M48, Ste24p [Alkalilimnicola ehrlichii MLHE-1]
 gi|114228024|gb|ABI57823.1| peptidase M48, Ste24p [Alkalilimnicola ehrlichii MLHE-1]
          Length = 500

 Score = 42.8 bits (100), Expect = 0.047,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 63/171 (36%), Gaps = 23/171 (13%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG-VARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A+  ++++ F +A    ++   D           LL    +Q  +G   QAA+   +
Sbjct: 330 YGLALALIRDRQFDEAEALLSKLEADLSGQPAW----LLARGRLQQRSGDPAQAAATLRK 385

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
               +P ++                + D   D        Q ++R V  + N P     +
Sbjct: 386 AQELFPGNRAAP-----------TYLADALLDAGQPNEARQVLTRAVRDHPNHP---ELK 431

Query: 180 FYVTVGRNQLAA---KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
             +    N+        + + RYY + G+  +A+ + + V  ++  A++ +
Sbjct: 432 RRLAEAANEAGRPVDAHLAMARYYHQLGDLNSALGQLREV-EHHPQADYYQ 481



 Score = 36.2 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 10/74 (13%), Positives = 23/74 (31%), Gaps = 3/74 (4%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
              +  +  L  +  + ++A     +    FP    A       A     AG+  +A  +
Sbjct: 360 PAWLLARGRLQQRSGDPAQAAATLRKAQELFPGNRAAPTY---LADALLDAGQPNEARQV 416

Query: 117 GEEYITQYPESKNV 130
               +  +P    +
Sbjct: 417 LTRAVRDHPNHPEL 430


>gi|113476762|ref|YP_722823.1| hypothetical protein Tery_3235 [Trichodesmium erythraeum IMS101]
 gi|110167810|gb|ABG52350.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101]
          Length = 734

 Score = 42.8 bits (100), Expect = 0.047,   Method: Composition-based stats.
 Identities = 16/119 (13%), Positives = 40/119 (33%), Gaps = 14/119 (11%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           +V    ++ ++A    +     +A   + Q     P    A              G   +
Sbjct: 4   EVMSAGQLLKQANQLKRAGRLDEAIALYYQVIEINPNFAWAYN---NLGDALVKQGNLDE 60

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           A +   E +   P S    ++ Y +G + A+        Q   +  ++Y+ + ++   +
Sbjct: 61  AVAYYFESLKLNPNS---AWLLYGLGEALAK--------QGNLEAAIEYLQKAIKTKPD 108


>gi|327259895|ref|XP_003214771.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase-associated protein
           CTR9 homolog [Anolis carolinensis]
          Length = 1244

 Score = 42.8 bits (100), Expect = 0.048,   Method: Composition-based stats.
 Identities = 41/276 (14%), Positives = 98/276 (35%), Gaps = 39/276 (14%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
           A L RA    E   +     ++T  +++A  +    E   +  +Y + + +     + Y 
Sbjct: 541 ASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYL 600

Query: 63  K-AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           +   +   + NF +A ++F +    ++D P    +    L  A       ++       E
Sbjct: 601 RLGAMARDKGNFYEASDWFKEALQINQDHP-DAWSLIGNLHLA-----KQEWGPGQKKFE 654

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ----RATKLMLQYMSRIVERYTNSPY 174
             + Q P ++N  Y    +G  + Q +     D+    R     L    +++     + Y
Sbjct: 655 RILKQ-PSTQNDTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLY 713

Query: 175 VKGA-------RFYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVL 217
                      + Y    R+  A  +E         + +   Y+++ +Y++A+  ++  L
Sbjct: 714 AANGIGAVLAHKGYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCL 773

Query: 218 ANY---SDAEHAEEAMARLVEAYVALALMDEAREVV 250
             +    +     E +  L  A      + E ++ +
Sbjct: 774 RKFYKHQNT----EVLLYLARALFKCGKLQECKQTL 805


>gi|300870170|ref|YP_003785041.1| response regulator aspartate phosphatase [Brachyspira pilosicoli
           95/1000]
 gi|300687869|gb|ADK30540.1| response regulator aspartate phosphatase containing TPR repeat
           domain [Brachyspira pilosicoli 95/1000]
          Length = 145

 Score = 42.8 bits (100), Expect = 0.048,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 29/92 (31%), Gaps = 9/92 (9%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
              I   F +        D       + RY + + EKA      + +  A  Y+     +
Sbjct: 7   LLLIFALFTISCATTVKVDA------EERYPKIIAEKAYTEFNNKRYKTAIAYYQYIIDN 60

Query: 87  FPFAGVARK---SLLMSAFVQYSAGKYQQAAS 115
           F     A+    +     F  Y   KY++A  
Sbjct: 61  FDRNNFAKDVSWAYYEIGFCYYYQNKYEEAID 92



 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 13/89 (14%), Positives = 35/89 (39%), Gaps = 17/89 (19%)

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES---KNVDYVYYLVGMS 140
              +P      K +   A+ +++  +Y+ A +  +  I  +  +   K+V + YY +G  
Sbjct: 27  EERYP------KIIAEKAYTEFNNKRYKTAIAYYQYIIDNFDRNNFAKDVSWAYYEIGFC 80

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y    +         +  + Y + ++  +
Sbjct: 81  YYYQNK--------YEEAIDYFNIVINDF 101


>gi|255077111|ref|XP_002502207.1| predicted protein [Micromonas sp. RCC299]
 gi|226517472|gb|ACO63465.1| predicted protein [Micromonas sp. RCC299]
          Length = 1219

 Score = 42.8 bits (100), Expect = 0.048,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 38/125 (30%), Gaps = 13/125 (10%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           +  +E Y  A   L++ N  +A + +         AG A +     A       +Y +A 
Sbjct: 204 KPPKERYTMANRALRDGNNVRALKLYASVDPAELDAGKAPQYWGNVALAHVRNKEYPEAV 263

Query: 115 SLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATKL-----MLQY-MSRIV 166
                 I + P      Y    Y +G +  +  R   +     +       +    +  +
Sbjct: 264 EAARRCIKEDPT-----YAKGRYRLGEALLKRARTAEHVLPNVRKEWVRGAIDEGFNEAL 318

Query: 167 ERYTN 171
               +
Sbjct: 319 RLNPD 323


>gi|330998201|ref|ZP_08322027.1| tetratricopeptide repeat protein [Paraprevotella xylaniphila YIT
           11841]
 gi|329568893|gb|EGG50691.1| tetratricopeptide repeat protein [Paraprevotella xylaniphila YIT
           11841]
          Length = 933

 Score = 42.8 bits (100), Expect = 0.048,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 62/203 (30%), Gaps = 33/203 (16%)

Query: 88  PFAGVARKSLLMSA-FVQYSAG--------KYQQAASLGEEYITQYPESKNVDYVYYLVG 138
           PF     ++         Y AG         +  A       I  +P+  + D VYY + 
Sbjct: 547 PFTEEQLQASNDILRDALYQAGILEMERLENFGLARRTLLRLIETFPDVADKDNVYYHLF 606

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK---EVE 195
           +   ++               QY  R++E + +S Y             +        + 
Sbjct: 607 LINGRLNDMA--------EAEQYKQRLIEEFPDSRYAIMLANPKYELYARQGKHIEDSLY 658

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEH-----AEEAMARLVEAYVAL--ALMDEARE 248
              Y      Y      ++ V  NYS +       A  A    ++A   L     D    
Sbjct: 659 AATY----EAYG--KNEYEEVFRNYSISTSDFPEGAHRAKFMFIQAMSQLYGGERDSFLV 712

Query: 249 VVSLIQERYPQGYWARYVETLVK 271
            +  + E+YP+       +++VK
Sbjct: 713 TLKQVIEKYPKDEVTEIAQSIVK 735


>gi|297798124|ref|XP_002866946.1| hypothetical protein ARALYDRAFT_912592 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312782|gb|EFH43205.1| hypothetical protein ARALYDRAFT_912592 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1043

 Score = 42.8 bits (100), Expect = 0.048,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 63/191 (32%), Gaps = 40/191 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
            + +  + E N+ KA   F++       +P      ++L+          + + A +   
Sbjct: 293 SRGIAQVNEGNYMKAISIFDKVLKEEPTYP------EALIGRGTAYAFQRELESAIADFT 346

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           + I   P +      +   G + A +   V          ++ +++ +    NSP V   
Sbjct: 347 KAIQSNPAATE---AWKRRGQARAALGEYV--------EAVEDLTKALVFEPNSPDVL-- 393

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
                         E  I  +  K  ++ AA+    + L    D + A      L  A+ 
Sbjct: 394 -------------HERGIVNF--KSKDFTAAVKDLSICLKQEKDNKSAY---TYLGLAFA 435

Query: 239 ALALMDEAREV 249
           +L    +A E 
Sbjct: 436 SLGEYKKAEEA 446


>gi|51783969|ref|NP_001001725.1| intraflagellar transport protein 88 homolog [Danio rerio]
 gi|45479854|gb|AAS66768.1| Ift88 [Danio rerio]
          Length = 824

 Score = 42.8 bits (100), Expect = 0.048,   Method: Composition-based stats.
 Identities = 32/258 (12%), Positives = 79/258 (30%), Gaps = 53/258 (20%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
           Q+ R   L    D      +  K      ++++ KA E++ +  R+   +     +L   
Sbjct: 469 QADRYAELAMSADRYNPAALINKGNTLFVKEDYEKAAEFYKESLRND--SSCTE-ALYNL 525

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY-------------AQMIRD 147
                  G+ ++A      ++  +   +N   V Y +   Y              Q+   
Sbjct: 526 GLTYKRLGRLEEALDC---FLKLHAILRNSAQVMYQLANLYEMLEDPHQAIEWLMQLTSV 582

Query: 148 VPYDQRAT-------------KLMLQYMSRIVERYT--------------NSPYVKGARF 180
            P D +                   QY       +               ++ + + A  
Sbjct: 583 TPTDAQVLAKLGDLYDNEGDKSQAFQYYYESYRYFPSNISVIEWLGAYYIDTQFCEKAIQ 642

Query: 181 ---YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
                T+ +      ++ +   Y + G Y  A+  ++ +   + +     E +  LV   
Sbjct: 643 YFERATLIQPTQVKWQLMVASCYRRSGNYQKALETYKEIHRKFPE---NVECLRFLVRLC 699

Query: 238 VALALMDEAREVVSLIQE 255
             + L  E ++  + +++
Sbjct: 700 TDMGLK-EVQDYATKLKK 716


>gi|116747861|ref|YP_844548.1| hypothetical protein Sfum_0413 [Syntrophobacter fumaroxidans MPOB]
 gi|116696925|gb|ABK16113.1| uncharacterized domain [Syntrophobacter fumaroxidans MPOB]
          Length = 584

 Score = 42.8 bits (100), Expect = 0.048,   Method: Composition-based stats.
 Identities = 17/128 (13%), Positives = 34/128 (26%), Gaps = 26/128 (20%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF-----VQYSAGKYQQAASLGEEYITQYP 125
             +  A E   +             S L   +       +   K+ +A    E+ I   P
Sbjct: 474 GEYEPALEALERAELL--------NSELKEIYNLRGFCYFKLKKHHEAIEAFEKAIELDP 525

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV--T 183
            S  +DY            I     D    +  ++     +E      + +     +   
Sbjct: 526 GS-AIDYA----------NIGSNLRDLGHREEAIKVYRIALELDPGIDFARENIDRLEAD 574

Query: 184 VGRNQLAA 191
           + R + A 
Sbjct: 575 LARERAAG 582


>gi|254302061|ref|ZP_04969419.1| hypothetical protein FNP_2105 [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148322253|gb|EDK87503.1| hypothetical protein FNP_2105 [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 936

 Score = 42.8 bits (100), Expect = 0.049,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 47/129 (36%), Gaps = 11/129 (8%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           Q+  +  A  FL ++N   A + + +   +  +      S++    V Y+   Y +A   
Sbjct: 127 QKTFFAVAQNFLAKENNEAALKAYKEIIDN-KYESYKE-SMMGLGIVYYNLKDYDKAIYW 184

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
             EY  + P+ +N + V YL   +  +           T   +     +     ++ Y +
Sbjct: 185 LSEYSKEMPK-ENKEMVSYLRASALYRK--------GNTDDAISRFEELANIEPSTEYSR 235

Query: 177 GARFYVTVG 185
            A  Y+   
Sbjct: 236 KAALYLIEI 244



 Score = 42.4 bits (99), Expect = 0.062,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 67/204 (32%), Gaps = 29/204 (14%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y K +  +    + +A   F +       + ++ K  L      + A +Y +A   GE+Y
Sbjct: 508 YLKGIAAMGLGKYDEAEAEFQKVLASGDQS-LSTKVYLNRVRNYFLAERYNEAVQAGEQY 566

Query: 121 I-TQYPESKNVDYVYYL--VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           +    P+ +   Y   L  +G+SY ++ +   YDQ                   S Y K 
Sbjct: 567 LSKLSPDKEKAIYSEMLDKIGLSYFRLGK---YDQAR-----------------SYYSKI 606

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           A         +      +I   Y     Y  A   ++ V   + +  + E+A  + +   
Sbjct: 607 ASMKGYEVYGR-----FQIADSYYNEQNYEKAGNLYKEVYNQFGETFYGEQAYYKYIMTL 661

Query: 238 VALALMDEAREVVSLIQERYPQGY 261
                 D      +   + YP   
Sbjct: 662 SLTGNTDAFEREKNNFMKVYPNSN 685



 Score = 35.1 bits (80), Expect = 9.8,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 20/59 (33%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
            Y   +     +   Y +A    ++ N   A   F + +   P    +RK+ L    + 
Sbjct: 187 EYSKEMPKENKEMVSYLRASALYRKGNTDDAISRFEELANIEPSTEYSRKAALYLIEIY 245


>gi|213964306|ref|ZP_03392532.1| TPR repeat-containing protein [Capnocytophaga sputigena Capno]
 gi|213953048|gb|EEB64404.1| TPR repeat-containing protein [Capnocytophaga sputigena Capno]
          Length = 252

 Score = 42.8 bits (100), Expect = 0.049,   Method: Composition-based stats.
 Identities = 8/71 (11%), Positives = 24/71 (33%), Gaps = 3/71 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++EK   + ++  ++ A E +            +       A   Y      ++    E+
Sbjct: 26  LFEKGAQYYQQGEYTNAIEQYKAILAH---GKESSALYYNLANAHYKLNHVPESIYYYEK 82

Query: 120 YITQYPESKNV 130
            +   P+++  
Sbjct: 83  ALQLNPDNQQA 93


>gi|209523074|ref|ZP_03271631.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
 gi|209496661|gb|EDZ96959.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
          Length = 891

 Score = 42.8 bits (100), Expect = 0.049,   Method: Composition-based stats.
 Identities = 19/157 (12%), Positives = 42/157 (26%), Gaps = 38/157 (24%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFP-----FAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
             + + +  + +A   +       P     +           A   Y    +  A    +
Sbjct: 364 GKILVSQNRYEQAISQYQILVTQNPDCEWFYGF--------LADAYYQNKDWLTALENYQ 415

Query: 119 EYITQYPE------------SK--NVDYVY--YLVGMS------YAQMIRDVPYDQRATK 156
           + I+                 K  N D     Y   ++      Y + I +V   Q   +
Sbjct: 416 KAISINSNQDCFYCGLGNCLHKLGNFDQAIEAYRKAITIKNYPWYYEEIINVLMSQEKWE 475

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
             L++    ++   N  Y    +  + +    L   E
Sbjct: 476 DALEFCFESLKNDPNH-YQFYDKMKINLL--HLGRHE 509



 Score = 39.3 bits (91), Expect = 0.55,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 71/224 (31%), Gaps = 37/224 (16%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++++A+ +L+E  F +A     Q  +  P       +          + + + A +  ++
Sbjct: 14  LHQQAIAYLEEGKFDEAIANCQQVIQQQP--EW-VMAYKTLGLALQKSNRLEAAENAYKK 70

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP--YVKG 177
            I       N+   Y  +G  YAQ  R         +     + + +    N    Y   
Sbjct: 71  AINL---DPNLVAAYGNLGSLYAQQER--------WEEAEVTLKQAISIDPNFRGLYRNL 119

Query: 178 AR------------------FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
           AR                    +     Q   +E++IG    + G++  A+  FQ  +A 
Sbjct: 120 ARVLTKIGRPEEAQSYWQKGLKLDAILKQRGQEELQIGNTLAESGKWSEAVSAFQKAIAY 179

Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
           +     A     +L    + L    EA           P   W+
Sbjct: 180 HPQLFLAH---HKLGLGLMQLNQPAEAVSAFEKAIAIQPDFSWS 220


>gi|220925788|ref|YP_002501090.1| TPR repeat-containing protein [Methylobacterium nodulans ORS 2060]
 gi|219950395|gb|ACL60787.1| Tetratricopeptide TPR_2 repeat protein [Methylobacterium nodulans
           ORS 2060]
          Length = 202

 Score = 42.8 bits (100), Expect = 0.049,   Method: Composition-based stats.
 Identities = 17/134 (12%), Positives = 39/134 (29%), Gaps = 20/134 (14%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGK 109
           +       +  +A   LK+++ + A E  ++     P    G +R++        Y    
Sbjct: 77  SGSDTADLLANRAGQALKDKDAALAVELLDRVVTLEPGWAEGWSRRAT-----AFYLLDD 131

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSY-AQMIRDVPYDQRATKLMLQYMSRIVER 168
              A +     +   P      +      +++      D           L    R  E 
Sbjct: 132 QASALADLHRALRLEPRHFEA-WA----ALAHIYMASDDKVR-------ALAAFRRAQEI 179

Query: 169 YTNSPYVKGARFYV 182
           Y     ++ A  ++
Sbjct: 180 YPRMGKLREAIEHL 193


>gi|325204426|gb|ADY99879.1| putative lipoprotein [Neisseria meningitidis M01-240355]
          Length = 238

 Score = 42.8 bits (100), Expect = 0.050,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 42/125 (33%), Gaps = 11/125 (8%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S       + +Y +A+   K   FS A               +A++S+ +    +   G 
Sbjct: 112 SAHTAETAQNLYNQALKHYKSGRFSAAASLLKGADGGD-GGSIAQRSMYLLLQSRARMGN 170

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVER 168
            +    +G  Y  ++ +S       + +G    +   +D+                +++ 
Sbjct: 171 CESVIEIGGRYANRFKDSPTAPEAIFKIGECQYRLQQKDIAR---------ATWRSLIQA 221

Query: 169 YTNSP 173
           Y +SP
Sbjct: 222 YPSSP 226


>gi|224370036|ref|YP_002604200.1| hypothetical protein HRM2_29490 [Desulfobacterium autotrophicum
           HRM2]
 gi|223692753|gb|ACN16036.1| conserved hypothetical protein [Desulfobacterium autotrophicum
           HRM2]
          Length = 598

 Score = 42.8 bits (100), Expect = 0.050,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 36/96 (37%), Gaps = 4/96 (4%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDF-PFAGVAR 94
             +   +   ++D+  D     E+Y        K+ +F  A + F +  +   P   +  
Sbjct: 366 AGDYDQAEKHFIDAQLDRPDMAELYYNIGGAAYKKGDFDAAVKNFTRARQTDDPG--LKP 423

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           K++       Y +G  + A    EE ++  PE K  
Sbjct: 424 KAIYNLGNALYRSGNLKAAIKAYEELVSLSPEDKEA 459


>gi|147785383|emb|CAN66287.1| hypothetical protein VITISV_011185 [Vitis vinifera]
          Length = 261

 Score = 42.8 bits (100), Expect = 0.050,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 32/82 (39%), Gaps = 6/82 (7%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF---PFAGVARKS 96
             + RD   D    V     + EK      + +F +A +YF Q   ++    F+  AR  
Sbjct: 68  SPNERDASADVSQRVSEAVSLLEKGRELQAQGDFERALQYFTQVVNNYKDFAFSDYAR-- 125

Query: 97  LLMSAFVQYSAGKYQQAASLGE 118
            +  A   Y  G  Q+A +  E
Sbjct: 126 -VGRALALYEVGDRQEAIAEME 146


>gi|39998366|ref|NP_954317.1| lysM domain-containing protein [Geobacter sulfurreducens PCA]
 gi|39985312|gb|AAR36667.1| lysM domain protein [Geobacter sulfurreducens PCA]
 gi|298507306|gb|ADI86029.1| LysM domain protein [Geobacter sulfurreducens KN400]
          Length = 235

 Score = 42.8 bits (100), Expect = 0.050,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 21/51 (41%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           +  +YEK V   K   +S++ E F +    +P + +   + L  A      
Sbjct: 182 EHSLYEKGVSAYKSGAYSQSVELFERFLARYPSSPLVPDATLYRADAFLKM 232


>gi|71032605|ref|XP_765944.1| hypothetical protein [Theileria parva strain Muguga]
 gi|68352901|gb|EAN33661.1| hypothetical protein, conserved [Theileria parva]
          Length = 356

 Score = 42.8 bits (100), Expect = 0.050,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 31/72 (43%), Gaps = 11/72 (15%)

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
            Y+ G Y++A    E+ +   P +++   V +LVG  Y + ++         +  +   S
Sbjct: 76  YYNDGDYEKALEYLEKSLQLNPMNES---VQFLVGCCYLKSLK--------IESAITAFS 124

Query: 164 RIVERYTNSPYV 175
           R+V    ++   
Sbjct: 125 RVVSINPDNSDA 136


>gi|257464684|ref|ZP_05629055.1| tetratricopeptide repeat protein [Actinobacillus minor 202]
 gi|257450344|gb|EEV24387.1| tetratricopeptide repeat protein [Actinobacillus minor 202]
          Length = 397

 Score = 42.8 bits (100), Expect = 0.050,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 75/197 (38%), Gaps = 32/197 (16%)

Query: 48  LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           LDS  D   ++++  K   A  F+    + +A  Y+     +  FA  +  S LM  +  
Sbjct: 103 LDSSPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYILLLDEPEFAVNS-LSQLMEIY-- 159

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
               ++++A ++ E+ +   PE+  +   +Y               DQ A    L  + +
Sbjct: 160 QKTKEWKKAINVSEKLLKIAPETDRIPLAHYY---CEYAQAVKNE-DQNAF---LSLLEK 212

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
            +E +                    A   + +G Y+L+   +  A   ++ VL    D++
Sbjct: 213 ALEHFPQC-----------------ARASMMLGDYHLENQRFRTAADYYEKVL--IQDSD 253

Query: 225 HAEEAMARLVEAYVALA 241
           +  E + ++   Y+ L 
Sbjct: 254 YIGEVLDKIRTCYLTLK 270


>gi|163783159|ref|ZP_02178153.1| hypothetical protein HG1285_14084 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881493|gb|EDP75003.1| hypothetical protein HG1285_14084 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 341

 Score = 42.8 bits (100), Expect = 0.050,   Method: Composition-based stats.
 Identities = 32/218 (14%), Positives = 73/218 (33%), Gaps = 20/218 (9%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
             T     R +Y+  +     +N+S+A     + ++  P   +   +L M+        +
Sbjct: 21  EQTKESEWRHLYDLGMSAYYARNYSEAIARLYRAAKIAPKEPLIWNALGMT---YMEVEE 77

Query: 110 YQQAASLGEEYITQYPESKNVDY---VYYLVGMSYAQMIRDVP--YDQRATKLMLQYMSR 164
           Y++A    +  +   P          + YL    Y + I+ +                  
Sbjct: 78  YKKAEEAFKRALASNPNHAESKMNLGILYLRMKDYRRAIKFLQEALSDETFDKKHIAFYY 137

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAK------EVEIGRYYLKRGEYVAAIPRFQLVLA 218
           +   Y     +   + Y+   +   A        ++E+G  Y+    Y  A   ++ ++A
Sbjct: 138 LARVY---RELGDRKKYLEYLKKATAYNPMFLDAQLELGSAYMDDKRYEEAERLYKSLIA 194

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           N         ++    + Y      ++A+E V L+ E 
Sbjct: 195 NNFKTPDIYLSL---AKVYYETGDYEKAKETVKLVLEN 229


>gi|99080413|ref|YP_612567.1| tetratricopeptide TPR_2 [Ruegeria sp. TM1040]
 gi|99036693|gb|ABF63305.1| Tetratricopeptide TPR_2 [Ruegeria sp. TM1040]
          Length = 194

 Score = 42.8 bits (100), Expect = 0.050,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 27/73 (36%), Gaps = 7/73 (9%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLG 117
           +  +    +  Q++  A E+F   +   P FA   + ++        ++A  +  A +  
Sbjct: 77  LLRRGREAMARQDWQAAIEHFTALTDHAPEFAEGWSERAR-----AFFNAELFGPAVADL 131

Query: 118 EEYITQYPESKNV 130
           E  +   P   N 
Sbjct: 132 ERALALNPNDFNA 144


>gi|296133328|ref|YP_003640575.1| hypothetical protein TherJR_1825 [Thermincola sp. JR]
 gi|296031906|gb|ADG82674.1| hypothetical protein TherJR_1825 [Thermincola potens JR]
          Length = 269

 Score = 42.8 bits (100), Expect = 0.051,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 47/121 (38%), Gaps = 21/121 (17%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRD---------VYLDSVTDVRYQREVYEKAVLFLK 69
           + + A+ +F S ++ FL G       +             S        + Y   +  + 
Sbjct: 2   MRRVAVLLFIS-SILFLSGCSNNKPPENSFVTNLPREETGSRNKPAVSDDAYANGLRAMV 60

Query: 70  EQNFSKAYEYFNQC---SRDFPFA----GVARKS----LLMSAFVQYSAGKYQQAASLGE 118
            +++ KA E+F +     ++F  A     VA+K+    L+  A   + +G  + A +  E
Sbjct: 61  HKDYYKAIEFFEKVVPEDKNFQDACNQLKVAKKALAKDLIDKARANFVSGNIKAALANIE 120

Query: 119 E 119
           E
Sbjct: 121 E 121


>gi|146298608|ref|YP_001193199.1| TPR repeat-containing protein [Flavobacterium johnsoniae UW101]
 gi|146153026|gb|ABQ03880.1| TPR repeat-containing protein [Flavobacterium johnsoniae UW101]
          Length = 593

 Score = 42.8 bits (100), Expect = 0.051,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 45/132 (34%), Gaps = 14/132 (10%)

Query: 62  EKAVLFLKEQNF-------SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           + A+    + +F        +A   F    ++F    +   +LL    +  S   +  A 
Sbjct: 464 QTALKEFAKGDFLLYQNKKPEAITQFQNILKNFKGQEIEAVTLLRLGKIYESQKDFASAL 523

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
           S  ++ I  + +   VD   +     Y   ++DV       +       +++  + +S Y
Sbjct: 524 SQYQQIIDNHSDGIYVDEALFFSAEIYNDELKDV-------EKAKPLYEKVIFNHQDSIY 576

Query: 175 VKGARFYVTVGR 186
              AR      R
Sbjct: 577 FVDARKKYRELR 588



 Score = 40.9 bits (95), Expect = 0.17,   Method: Composition-based stats.
 Identities = 40/273 (14%), Positives = 95/273 (34%), Gaps = 32/273 (11%)

Query: 14  AWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLK---- 69
              Y++  F L++    A       ++       +     +      Y++A   ++    
Sbjct: 324 LVTYEVTPFTLSLQLIQAHFLAFNLKKTEEAKTVVKKALTLNLNA--YQQADAKMELADI 381

Query: 70  ---EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
              E+ +++A  Y++Q   D     ++ ++ L +A   Y  G ++ A    +E  +   +
Sbjct: 382 LLLEEKYNQALIYYSQIQLDLKNDVMSHEASLKAAKTSYYKGDFEWALKQFKELKSANTQ 441

Query: 127 SKNVDYVYYLVGMSYAQMIRD---VPYDQRATKL-MLQYMSRIVERYTNSPYVKGARFYV 182
               D       + Y  +I D       Q A K            +         A    
Sbjct: 442 LIAND------ALEYFLLINDNTAADSTQTALKEFAKGDFLLYQNKKP------EAITQF 489

Query: 183 TVGRNQLAAKEVEI------GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                    +E+E       G+ Y  + ++ +A+ ++Q ++ N+SD  + +EA+    E 
Sbjct: 490 QNILKNFKGQEIEAVTLLRLGKIYESQKDFASALSQYQQIIDNHSDGIYVDEALFFSAEI 549

Query: 237 Y-VALALMDEAREVVSLIQERYPQGYWARYVET 268
           Y   L  +++A+ +   +   +    +      
Sbjct: 550 YNDELKDVEKAKPLYEKVIFNHQDSIYFVDARK 582


>gi|322500184|emb|CBZ35261.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 811

 Score = 42.8 bits (100), Expect = 0.051,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 63/219 (28%), Gaps = 48/219 (21%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY-- 110
           +      +Y   +   K   + +A   F +            ++L+ S+ V Y       
Sbjct: 507 EADNVEAIYNLGLAAKKLGLYEEAVRMFKRV-----------QALVDSSEVLYQIADLSD 555

Query: 111 ----QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
                 A       I + P   N       +G  YA+   DV            Y     
Sbjct: 556 LVGDPAALEWFNRLIGRVPTDPN---ALARIGSLYARDGDDV--------QAFHYYLEAY 604

Query: 167 ERY--------------TNSPYVKGARF---YVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
             Y                +     A       +  + Q    ++ +   + +RG+YV A
Sbjct: 605 RYYQVNMDVISWLGAYFVKNEVYDKAVQFFERASHIQPQEVKWQLMVASCHRRRGDYVQA 664

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
              ++ V   Y D     E +  LV+      L +EA E
Sbjct: 665 KRLYEQVHRKYPD---NIECLNYLVQLCKDAGLNEEANE 700



 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 69/208 (33%), Gaps = 43/208 (20%)

Query: 62  EKAVLFLKEQNFSKAYEY------FNQC--SRDFPFAGVARKSLLMSAFV-------QYS 106
           E A+L L+ +++  A E         +    +   +  +A +  +   +        QY 
Sbjct: 144 ESAMLALQ-KDYGAALEKAKDAGKLERLLCKKREQYG-LAEQINVDLTYAVHFNLAVQYQ 201

Query: 107 AGK-YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
             + Y +A +     I           V +         + ++   Q+   L ++   ++
Sbjct: 202 NHQLYTEALNTYNLIIRN---------VQFPQAGRLRVNMGNIYLAQQNYLLAIKMYRKV 252

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           ++         G      + RN        I   ++K G+Y  A   ++ V+    DA  
Sbjct: 253 LDETP----TAGKELRYHLCRN--------IANAFVKLGQYRDAANSYETVVEGNGDANA 300

Query: 226 AEEAMARLVEAYVALALMDEAREVVSLI 253
                  L+  Y AL   ++ +   + +
Sbjct: 301 T----FNLILCYYALGETEKMKRTFTRL 324


>gi|269963140|ref|ZP_06177475.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269832104|gb|EEZ86228.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 251

 Score = 42.8 bits (100), Expect = 0.051,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 47/130 (36%), Gaps = 15/130 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            Q   D+   +R     +    +  + Y +S Y               A     +G+ Y 
Sbjct: 137 YQDAVDLILKKRDYTGAIAAFQQFQKDYPDSTYS--------------ANSHYWLGQLYF 182

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + +   A+  F  V+ +Y D+    +A+ +L +         +A++    + + YP   
Sbjct: 183 AKKQDKDAVKSFAAVV-SYKDSNKRADALVKLGDIAERNNNDAQAKKYYQQVVDEYPGSA 241

Query: 262 WARYVETLVK 271
            A+   + +K
Sbjct: 242 SAKVASSKLK 251



 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 42/124 (33%), Gaps = 23/124 (18%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               Y  A +  +++   YP+S      +Y +G  Y    +D        K  ++  + +
Sbjct: 146 KKRDYTGAIAAFQQFQKDYPDSTYSANSHYWLGQLYFAKKQD--------KDAVKSFAAV 197

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           V  Y +S     A   +     +    + +  +YY             Q V+  Y  +  
Sbjct: 198 VS-YKDSNKRADALVKLGDIAER-NNNDAQAKKYY-------------QQVVDEYPGSAS 242

Query: 226 AEEA 229
           A+ A
Sbjct: 243 AKVA 246



 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 48/138 (34%), Gaps = 16/138 (11%)

Query: 50  SVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY--- 105
             T    ++  Y+ AV   LK+++++ A   F Q  +D+P +  +  S      + +   
Sbjct: 126 KYTSNADEQTAYQDAVDLILKKRDYTGAIAAFQQFQKDYPDSTYSANSHYWLGQLYFAKK 185

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
                 ++ +    Y      +K  D        +  ++      +        +Y  ++
Sbjct: 186 QDKDAVKSFAAVVSYKD---SNKRAD--------ALVKLGDIAERNNNDA-QAKKYYQQV 233

Query: 166 VERYTNSPYVKGARFYVT 183
           V+ Y  S   K A   + 
Sbjct: 234 VDEYPGSASAKVASSKLK 251


>gi|62184697|ref|YP_219482.1| hypothetical protein CAB050 [Chlamydophila abortus S26/3]
 gi|62147764|emb|CAH63508.1| conserved hypothetical protein [Chlamydophila abortus S26/3]
          Length = 335

 Score = 42.8 bits (100), Expect = 0.051,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 65/201 (32%), Gaps = 34/201 (16%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D    + +Y KAV+     N  +A        R  P      K+ +   ++     ++ +
Sbjct: 141 DPWNPQSLYNKAVVLTDMNNEQEAIALLETTVRKNPL-YW--KAWIKLGYLLSRHKQWDK 197

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A    E  +   P   ++   +Y +G+ Y  + +        T+L L+     +      
Sbjct: 198 ATEAYERVVQLRP---DLSDGHYNLGLCYLTLDK--------TRLALKAFQEAL------ 240

Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
                          + A     +G  Y+   +   A   F   L    + EH E +   
Sbjct: 241 -----------FLNEEDADAHFYVGLAYMDLKQNRQASDAFHRALGI--NLEH-ERSHYL 286

Query: 233 LVEAYVALALMDEAREVVSLI 253
           L   Y      ++A + +S +
Sbjct: 287 LGYLYHMEGQFEKAEKELSFL 307


>gi|326919998|ref|XP_003206263.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog
           [Meleagris gallopavo]
          Length = 1167

 Score = 42.8 bits (100), Expect = 0.051,   Method: Composition-based stats.
 Identities = 41/276 (14%), Positives = 98/276 (35%), Gaps = 39/276 (14%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
           A L RA    E   +     ++T  +++A  +    E   +  +Y + + +     + Y 
Sbjct: 476 ASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYL 535

Query: 63  K-AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           +   +   + NF +A ++F +    ++D P    +    L  A       ++       E
Sbjct: 536 RLGAMARDKGNFYEASDWFKEALQINQDHP-DAWSLIGNLHLA-----KQEWGPGQKKFE 589

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ----RATKLMLQYMSRIVERYTNSPY 174
             + Q P ++N  Y    +G  + Q +     D+    R     L    +++     + Y
Sbjct: 590 RILKQ-PSTQNDTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLY 648

Query: 175 VKGA-------RFYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVL 217
                      + Y    R+  A  +E         + +   Y+++ +Y++A+  ++  L
Sbjct: 649 AANGIGAVLAHKGYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCL 708

Query: 218 ANY---SDAEHAEEAMARLVEAYVALALMDEAREVV 250
             +    +     E +  L  A      + E ++ +
Sbjct: 709 RKFYKHQNT----EVLLYLARALFKCGKLQECKQTL 740


>gi|146090777|ref|XP_001466347.1| intraflagellar transport protein IFT88 [Leishmania infantum JPCM5]
 gi|134070709|emb|CAM69062.1| putative intraflagellar transport protein IFT88 [Leishmania
           infantum JPCM5]
          Length = 811

 Score = 42.8 bits (100), Expect = 0.051,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 63/219 (28%), Gaps = 48/219 (21%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY-- 110
           +      +Y   +   K   + +A   F +            ++L+ S+ V Y       
Sbjct: 507 EADNVEAIYNLGLAAKKLGLYEEAVRMFKRV-----------QALVDSSEVLYQIADLSD 555

Query: 111 ----QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
                 A       I + P   N       +G  YA+   DV            Y     
Sbjct: 556 LVGDPAALEWFNRLIGRVPTDPN---ALARIGSLYARDGDDV--------QAFHYYLEAY 604

Query: 167 ERY--------------TNSPYVKGARF---YVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
             Y                +     A       +  + Q    ++ +   + +RG+YV A
Sbjct: 605 RYYQVNMDVISWLGAYFVKNEVYDKAVQFFERASHIQPQEVKWQLMVASCHRRRGDYVQA 664

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
              ++ V   Y D     E +  LV+      L +EA E
Sbjct: 665 KRLYEQVHRKYPD---NIECLNYLVQLCKDAGLNEEANE 700



 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 69/208 (33%), Gaps = 43/208 (20%)

Query: 62  EKAVLFLKEQNFSKAYEY------FNQC--SRDFPFAGVARKSLLMSAFV-------QYS 106
           E A+L L+ +++  A E         +    +   +  +A +  +   +        QY 
Sbjct: 144 ESAMLALQ-KDYGAALEKAKDAGKLERLLCKKREQYG-LAEQINVDLTYAVHFNLAVQYQ 201

Query: 107 AGK-YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
             + Y +A +     I           V +         + ++   Q+   L ++   ++
Sbjct: 202 NHQLYTEALNTYNLIIRN---------VQFPQAGRLRVNMGNIYLAQQNYLLAIKMYRKV 252

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           ++         G      + RN        I   ++K G+Y  A   ++ V+    DA  
Sbjct: 253 LDETP----TAGKELRYHLCRN--------IANAFVKLGQYRDAANSYETVVEGNGDANA 300

Query: 226 AEEAMARLVEAYVALALMDEAREVVSLI 253
                  L+  Y AL   ++ +   + +
Sbjct: 301 T----FNLILCYYALGETEKMKRTFTRL 324


>gi|37589898|gb|AAH00750.4| PPP5C protein [Homo sapiens]
 gi|38197276|gb|AAH01831.4| PPP5C protein [Homo sapiens]
          Length = 484

 Score = 42.8 bits (100), Expect = 0.052,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 49/156 (31%), Gaps = 31/156 (19%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF-- 102
              +   ++   E+  +A  + K +++  A ++++Q     P        +S    A+  
Sbjct: 16  EPPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS---LAYLR 72

Query: 103 --VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
                Y+ G   +A  L ++YI            YY    S   +           +  L
Sbjct: 73  TECYGYALGDATRAIELDKKYIK----------GYYRRAASNMAL--------GKFRAAL 114

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           +    +V+   +      A+         +  K  E
Sbjct: 115 RDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 147


>gi|320104239|ref|YP_004179830.1| tetratricopeptide repeat-containing protein [Isosphaera pallida
           ATCC 43644]
 gi|319751521|gb|ADV63281.1| Tetratricopeptide TPR_1 repeat-containing protein [Isosphaera
           pallida ATCC 43644]
          Length = 364

 Score = 42.8 bits (100), Expect = 0.053,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 34/109 (31%), Gaps = 13/109 (11%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +  Y +   F +     KA E  ++  R  P     R++      V     ++ QA    
Sbjct: 265 KGYYNRGQAFYRLGRVDKALEDLDEAVRLQPDDPYPRQAR---GTVNSLLKRHDQAIEDF 321

Query: 118 EEYITQYPESKNVDYVYY-LVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
              I   P +       Y   G++Y         D+ A +       ++
Sbjct: 322 SAAIRANPTNP----ALYRQRGLAY-----RAKGDEEAAQRDFATARKL 361



 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 51/171 (29%), Gaps = 26/171 (15%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLF----------LKEQNFSKAYEYFNQCSRDFPF 89
            + S  V      D     E Y++                E  F +A E+F Q  R  P 
Sbjct: 203 SKVSSAVSNTPPHDPNDPLERYQRDRDAKAANAAGAKAYSEGRFEEAIEHFTQAIRRQPL 262

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
                K         Y  G+  +A    +E +   P+           G   + + R   
Sbjct: 263 GF---KGYYNRGQAFYRLGRVDKALEDLDEAVRLQPDDPYPRQA---RGTVNSLLKR--- 313

Query: 150 YDQRATKLMLQYMSRIVERYTNSP--YVKGARFYVTVGRNQLAAKEVEIGR 198
           +DQ      ++  S  +     +P  Y +    Y   G  + A ++    R
Sbjct: 314 HDQ-----AIEDFSAAIRANPTNPALYRQRGLAYRAKGDEEAAQRDFATAR 359


>gi|254506051|ref|ZP_05118195.1| Tol system periplasmic component YbgF [Vibrio parahaemolyticus 16]
 gi|219550869|gb|EED27850.1| Tol system periplasmic component YbgF [Vibrio parahaemolyticus 16]
          Length = 260

 Score = 42.8 bits (100), Expect = 0.053,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 49/130 (37%), Gaps = 15/130 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            Q   D+   +R     +    +  + Y +S +   + +++              G+ Y 
Sbjct: 145 YQNAVDLILKKRDYTGAIAAFQQFQKDYPDSSFTPNSHYWL--------------GQLYF 190

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + +   A+  F  V+ +Y D+    +A+ +L +        ++A +    + + YP   
Sbjct: 191 AKKQDKEAVKSFAAVI-SYQDSNKRADALVKLGDIASRNNNTEQANKYYQQVLDEYPSSA 249

Query: 262 WARYVETLVK 271
            A+  +  +K
Sbjct: 250 SAKLAKERIK 259



 Score = 42.0 bits (98), Expect = 0.077,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 53/128 (41%), Gaps = 10/128 (7%)

Query: 57  QREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           ++  Y+ AV   LK+++++ A   F Q  +D+P +     S      + ++  + ++A  
Sbjct: 141 EQTAYQNAVDLILKKRDYTGAIAAFQQFQKDYPDSSFTPNSHYWLGQLYFAKKQDKEAVK 200

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
                I+ Y +S         +G        D+      T+   +Y  ++++ Y +S   
Sbjct: 201 SFAAVIS-YQDSNKRADALVKLG--------DIASRNNNTEQANKYYQQVLDEYPSSASA 251

Query: 176 KGARFYVT 183
           K A+  + 
Sbjct: 252 KLAKERIK 259



 Score = 40.5 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 42/128 (32%), Gaps = 23/128 (17%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               Y  A +  +++   YP+S      +Y +G  Y    +D        K  ++  + +
Sbjct: 154 KKRDYTGAIAAFQQFQKDYPDSSFTPNSHYWLGQLYFAKKQD--------KEAVKSFAAV 205

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           +  Y +S     A   +    +              +      A   +Q VL  Y  +  
Sbjct: 206 IS-YQDSNKRADALVKLGDIAS--------------RNNNTEQANKYYQQVLDEYPSSAS 250

Query: 226 AEEAMARL 233
           A+ A  R+
Sbjct: 251 AKLAKERI 258


>gi|224418202|ref|ZP_03656208.1| hypothetical protein HcanM9_02883 [Helicobacter canadensis MIT
           98-5491]
 gi|253827529|ref|ZP_04870414.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
 gi|313141737|ref|ZP_07803930.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
 gi|253510935|gb|EES89594.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
 gi|313130768|gb|EFR48385.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
          Length = 294

 Score = 42.8 bits (100), Expect = 0.053,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 46/133 (34%), Gaps = 21/133 (15%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
             +   EV+ +    L+++ +  A EY  +     +       +   +     +   KY+
Sbjct: 174 KDKPLAEVFAEGEKLLEQKEYKLASEYLQKAVEGHY----KPARGNYLLGESAFYQKKYE 229

Query: 112 QAA----SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            A        E Y          DY+  L+ +  AQ    +       +  L+++  +V 
Sbjct: 230 DAIYYYKVSAERY-------DKADYMP-LLMLHTAQAFEKIN----NKENALKFLESLVV 277

Query: 168 RYTNSPYVKGARF 180
            Y +S   + A+ 
Sbjct: 278 LYPDSKEAQEAKK 290


>gi|114591086|ref|XP_001160720.1| PREDICTED: leprecan-like 1 isoform 3 [Pan troglodytes]
          Length = 462

 Score = 42.8 bits (100), Expect = 0.053,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 6/68 (8%)

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           F  Y  G+Y +A    + Y+  +P+ ++V     L  + Y + + D   D  A+    + 
Sbjct: 68  FAYYRVGEYVKALECAKAYLLCHPDDEDV-----LDNVDYYESLLDDSTDP-ASIEARED 121

Query: 162 MSRIVERY 169
           ++  V+R+
Sbjct: 122 LTMFVKRH 129


>gi|288928460|ref|ZP_06422307.1| BatD protein [Prevotella sp. oral taxon 317 str. F0108]
 gi|288331294|gb|EFC69878.1| BatD protein [Prevotella sp. oral taxon 317 str. F0108]
          Length = 847

 Score = 42.8 bits (100), Expect = 0.054,   Method: Composition-based stats.
 Identities = 9/69 (13%), Positives = 19/69 (27%), Gaps = 4/69 (5%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
             A    K  N+ +A   +    +  P    + +         + +    QA    E   
Sbjct: 623 ASADQEYKRGNYPQAIADYKALLKKAP----SAEVYYNLGNAYFRSDSIPQAILAYERAA 678

Query: 122 TQYPESKNV 130
              P +  +
Sbjct: 679 LINPGNSQI 687


>gi|239906121|ref|YP_002952860.1| hypothetical protein DMR_14830 [Desulfovibrio magneticus RS-1]
 gi|239795985|dbj|BAH74974.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 458

 Score = 42.8 bits (100), Expect = 0.054,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 46/134 (34%), Gaps = 18/134 (13%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKS 96
              +     L    D       +EK + F K+  F KA E+F++  +  P      A + 
Sbjct: 293 AETADPTPALPESRDSADAEAAFEKGIEFGKQNKFQKAIEFFDKAIKLNPNRADFFASR- 351

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
                   Y   +Y +A     + I + P   +    Y + G+S A+  +         +
Sbjct: 352 ----GHAHYYLAQYPKAIDDYTKAIEKNP---SFALAYSMRGLSRARSDK--------YQ 396

Query: 157 LMLQYMSRIVERYT 170
             ++  ++ +    
Sbjct: 397 QAVEDFNKAISLGP 410


>gi|254413330|ref|ZP_05027101.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
 gi|196179950|gb|EDX74943.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
          Length = 1015

 Score = 42.8 bits (100), Expect = 0.054,   Method: Composition-based stats.
 Identities = 34/267 (12%), Positives = 75/267 (28%), Gaps = 74/267 (27%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY------- 110
             +Y++A+      +F  A + + +  +   +       L     V Y+  +Y       
Sbjct: 256 NTLYKEALYLHHIGDFFPAEKKYKEVLQWHTYHA---DVLHDLGIVYYNLQQYQNCLSHL 312

Query: 111 ---------------------------QQAASLGEEYITQYP-----------------E 126
                                       QA    ++ I   P                 +
Sbjct: 313 LQSLAIDPASGLHHYSLGLVLEKIGNIPQAIEAYQKSIQLNPKLINAYNNLGVILCQTDQ 372

Query: 127 SKNVDYVYYLVGM--------SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            ++ +YV Y   +        SY  +   +    R     ++   + ++     P     
Sbjct: 373 FQDAEYV-YRQAVTANPSHFGSYINLGNLLLEQHRNIDEAIELYQKALQLKPRDP---DV 428

Query: 179 RFYVTVGRNQL---AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR-LV 234
              + +  +     A      G Y   R  Y AAI +++  L      +  + ++   L 
Sbjct: 429 MQNLGIAYDLKHDPAKSAFYFGNYAHIRQNYEAAIEQYEKGLK----TQIGKSSIYINLA 484

Query: 235 EAYVALALMDEAREVVSLIQERYPQGY 261
           + Y  L   ++A        + YP+  
Sbjct: 485 DCYEKLNQEEKAINTYHEGLKHYPKTP 511



 Score = 36.6 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 41/143 (28%), Gaps = 12/143 (8%)

Query: 126 ESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP-----YVKGA 178
           + +N+D     Y   +       DV  +      +    ++    + N       Y    
Sbjct: 404 QHRNIDEAIELYQKALQLKPRDPDVMQNLGIAYDLKHDPAKSAFYFGNYAHIRQNYEAAI 463

Query: 179 RFYVTVGRNQLAAKEVEI--GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
             Y    + Q+    + I     Y K  +   AI  +   L +Y            L+ A
Sbjct: 464 EQYEKGLKTQIGKSSIYINLADCYEKLNQEEKAINTYHEGLKHYPKTPRLY---FCLIVA 520

Query: 237 YVALALMDEAREVVSLIQERYPQ 259
                 + EA  V S   +  P 
Sbjct: 521 LQNFGRIHEAITVASQAAQLLPN 543


>gi|189218346|ref|YP_001938988.1| TPR repeats containing protein [Methylacidiphilum infernorum V4]
 gi|189185204|gb|ACD82389.1| TPR repeats containing protein [Methylacidiphilum infernorum V4]
          Length = 855

 Score = 42.8 bits (100), Expect = 0.054,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 62/191 (32%), Gaps = 29/191 (15%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQN--FSKAYEYFNQCSRDFPFAGVARKSLLMSA-FVQY 105
           D  TD      +Y  A             A E      + +P   +A K+L  +A +  Y
Sbjct: 547 DYPTDRLVPEALYLAAFSDYLAGKIGLHTAREKMLDLLKKYPSEPIAPKALFSAAEYA-Y 605

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
           +   +  A  L EE   +YP S+  D  YY    S  +         +     L  + +I
Sbjct: 606 NEADFYGARWLFEEVPKEYPSSELADQAYYWAAKSAIEC--------KDLSGALLLLEKI 657

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
            E          +   +              G+ Y  + +Y AAI  F  VL      + 
Sbjct: 658 PENSP-----IKSEARLLQ------------GKIYFDQSQYAAAISLFDGVLDKEKGGKL 700

Query: 226 AEEAMARLVEA 236
              A+ R  ++
Sbjct: 701 HVLALLRKADS 711



 Score = 38.9 bits (90), Expect = 0.71,   Method: Composition-based stats.
 Identities = 11/74 (14%), Positives = 29/74 (39%), Gaps = 2/74 (2%)

Query: 25  TIFFSIAVCFLVGWERQSSR--DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
              FS  +   +G      +  D+     ++    + ++  A     E +F  A   F +
Sbjct: 560 LAAFSDYLAGKIGLHTAREKMLDLLKKYPSEPIAPKALFSAAEYAYNEADFYGARWLFEE 619

Query: 83  CSRDFPFAGVARKS 96
             +++P + +A ++
Sbjct: 620 VPKEYPSSELADQA 633



 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 34/99 (34%), Gaps = 11/99 (11%)

Query: 17  YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
            ++ K  L IF     C  +G    S         T    +  ++E+    + +   S+ 
Sbjct: 12  RKMRKRTLKIFLFF--CSFIGCCLGS---------TVGSPEEALFEQIKEAMDDSLLSRT 60

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
            +   +    +P +       ++ A   Y   KY++  +
Sbjct: 61  IDLSREFENSYPHSVYLPSVCILHAEALYFQAKYEELIA 99


>gi|332880806|ref|ZP_08448477.1| tetratricopeptide repeat protein [Capnocytophaga sp. oral taxon 329
           str. F0087]
 gi|332681189|gb|EGJ54115.1| tetratricopeptide repeat protein [Capnocytophaga sp. oral taxon 329
           str. F0087]
          Length = 933

 Score = 42.8 bits (100), Expect = 0.054,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 62/203 (30%), Gaps = 33/203 (16%)

Query: 88  PFAGVARKSLLMSA-FVQYSAG--------KYQQAASLGEEYITQYPESKNVDYVYYLVG 138
           PF     ++         Y AG         +  A       I  +P+  + D VYY + 
Sbjct: 547 PFTEEQLQASNDILRDALYQAGILEMERLENFGLARRTLLRLIETFPDVADKDNVYYHLF 606

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK---EVE 195
           +   ++               QY  R++E + +S Y             +        + 
Sbjct: 607 LINGRLNDMA--------EAEQYKQRLIEEFPDSRYAIMLANPKYELYARQGKHIEDSLY 658

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEH-----AEEAMARLVEAYVAL--ALMDEARE 248
              Y      Y      ++ V  NYS +       A  A    ++A   L     D    
Sbjct: 659 AATY----EAYG--KNEYEEVFRNYSISTSDFPEGAHRAKFMFIQAMSQLYGGERDSFLV 712

Query: 249 VVSLIQERYPQGYWARYVETLVK 271
            +  + E+YP+       +++VK
Sbjct: 713 TLKQVIEKYPKDEVTEIAQSIVK 735


>gi|261868285|ref|YP_003256207.1| hypothetical protein D11S_1624 [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261413617|gb|ACX82988.1| tetratricopeptide domain protein [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 396

 Score = 42.8 bits (100), Expect = 0.054,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 75/200 (37%), Gaps = 32/200 (16%)

Query: 48  LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           LD+     +++++  K   A  F+    F +A E       D P    A  +L     + 
Sbjct: 103 LDNSPHYSFEQKLLAKQQLAKDFMTVGFFDRA-ENLYILMVDEP--EFAEGALQQLTVIY 159

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
               ++++A ++ E+     P++ NV+   Y     Y + ++ +P D +  +   Q + +
Sbjct: 160 QKTKEWKKAINVAEKLAKIAPKANNVELAQY-----YCEYVQHLPADSKENRQ--QILLQ 212

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
            ++   N                      + +    +++  Y +A+   + +L       
Sbjct: 213 ALKVSPNCVRAS-----------------MMLADLAIQQENYKSAVGFLEEILNQSP--A 253

Query: 225 HAEEAMARLVEAYVALALMD 244
           +  EA+  L   Y  L L+D
Sbjct: 254 YISEALPALKHCYQKLNLLD 273


>gi|169158541|emb|CAQ14425.1| intraflagellar transport 88 homolog [Danio rerio]
 gi|190338004|gb|AAI62512.1| Intraflagellar transport 88 homolog [Danio rerio]
          Length = 824

 Score = 42.8 bits (100), Expect = 0.054,   Method: Composition-based stats.
 Identities = 32/258 (12%), Positives = 79/258 (30%), Gaps = 53/258 (20%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
           Q+ R   L    D      +  K      ++++ KA E++ +  R+   +     +L   
Sbjct: 469 QADRYAELAMSADRYNPAALINKGNTLFVKEDYEKAAEFYKESLRND--SSCTE-ALYNL 525

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY-------------AQMIRD 147
                  G+ ++A      ++  +   +N   V Y +   Y              Q+   
Sbjct: 526 GLTYKRLGRLEEALDC---FLKLHAILRNSAQVMYQLANLYEMLEDPHQAIEWLMQLTSV 582

Query: 148 VPYDQRAT-------------KLMLQYMSRIVERYT--------------NSPYVKGARF 180
            P D +                   QY       +               ++ + + A  
Sbjct: 583 TPTDAQVLAKLGDLYDNEGDKSQAFQYYYESYRYFPSNISVIEWLGAYYIDTQFCEKAIQ 642

Query: 181 ---YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
                T+ +      ++ +   Y + G Y  A+  ++ +   + +     E +  LV   
Sbjct: 643 YFERATLIQPTQVKWQLMVASCYRRSGNYQKALETYKEIHRKFPE---NVECLRFLVRLC 699

Query: 238 VALALMDEAREVVSLIQE 255
             + L  E ++  + +++
Sbjct: 700 TDMGLK-EVQDYATKLKK 716


>gi|116327425|ref|YP_797145.1| TPR repeat-containing protein [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116331983|ref|YP_801701.1| TPR repeat-containing protein [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116120169|gb|ABJ78212.1| Conserved hypothetical protein containing tetratricopeptide repeat
           (TPR) domains [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116125672|gb|ABJ76943.1| Conserved hypothetical protein containing tetratricopeptide repeat
           (TPR) domains [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 688

 Score = 42.8 bits (100), Expect = 0.054,   Method: Composition-based stats.
 Identities = 24/193 (12%), Positives = 62/193 (32%), Gaps = 31/193 (16%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
             +++ A  +  + +   A E + +     P       +L+    V     +Y +A +  
Sbjct: 379 DSLFQLAEAYYNKGDLLSAEETYRRIVSSTPGDSFTETALINLGVVLDQMERYSEAITAL 438

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
              +   P++      Y+ +G+ Y               L ++   + +     +   + 
Sbjct: 439 SRVVDLNPKNAK---AYHTLGLVYKHSGNGT--------LAIENWRKSIAIEPENIQSRE 487

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           A                  G Y  +   +  A+  +  V+ +  DA        ++ EAY
Sbjct: 488 AL-----------------GDYLFENKFFREAVEEYIGVVKHKDDAYKVY---LKMAEAY 527

Query: 238 VALALMDEAREVV 250
           + +     A +++
Sbjct: 528 MGMQDDVNAEKIL 540



 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 70/212 (33%), Gaps = 18/212 (8%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  AV + K+    +A E F +     P   +A  S      + Y+   Y+ A     + 
Sbjct: 243 YNLAVSYFKKGEIPQAEEEFKKVVTKTPSGRLAALSYSYLGNIAYNKQDYKGAEYYFRQA 302

Query: 121 ITQYPESKNVDYVYYLV-----------GMSYAQMIRDVP-YDQRATKLMLQYMSRIVER 168
               P      Y+Y L             + Y ++ RD    D    +L+ +  S + + 
Sbjct: 303 SALSPN--EAKYLYNLAVVLQKNGNKEEALKYLELARDAGANDPEIYRLIAEGFSNLNQ- 359

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
                    A                ++   Y  +G+ ++A   ++ ++++       E 
Sbjct: 360 ---GEMSISALQKSLKYNPTDLDSLFQLAEAYYNKGDLLSAEETYRRIVSSTPGDSFTET 416

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           A+  L      +    EA   +S + +  P+ 
Sbjct: 417 ALINLGVVLDQMERYSEAITALSRVVDLNPKN 448


>gi|94263356|ref|ZP_01287171.1| hypothetical protein MldDRAFT_1322 [delta proteobacterium MLMS-1]
 gi|94268863|ref|ZP_01291305.1| hypothetical protein MldDRAFT_2566 [delta proteobacterium MLMS-1]
 gi|93451437|gb|EAT02281.1| hypothetical protein MldDRAFT_2566 [delta proteobacterium MLMS-1]
 gi|93456311|gb|EAT06441.1| hypothetical protein MldDRAFT_1322 [delta proteobacterium MLMS-1]
          Length = 150

 Score = 42.8 bits (100), Expect = 0.054,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 29/80 (36%), Gaps = 3/80 (3%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA-YVALALMDEAREVVSL 252
           + I +Y+     +  A  R + +LA Y  +++  EA+       Y         +     
Sbjct: 71  LGIAKYHFDHDRFAEATARLEQLLAEYGRSDNTPEAIFLSGVCGYKQSHDPKPLKAAYER 130

Query: 253 IQERYPQGYWAR--YVETLV 270
           +   +P   W +  Y   L+
Sbjct: 131 LSADFPASEWTKRAYPYRLL 150



 Score = 39.7 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 33/82 (40%), Gaps = 7/82 (8%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
           LL  A   +   ++ +A +  E+ + +Y  S N     +L G+   +      +D +  K
Sbjct: 70  LLGIAKYHFDHDRFAEATARLEQLLAEYGRSDNTPEAIFLSGVCGYKQ----SHDPKPLK 125

Query: 157 LMLQYMSRIVERYTNSPYVKGA 178
              +   R+   +  S + K A
Sbjct: 126 AAYE---RLSADFPASEWTKRA 144


>gi|226471566|emb|CAX70864.1| hypothetical protein [Schistosoma japonicum]
          Length = 431

 Score = 42.8 bits (100), Expect = 0.055,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 51/151 (33%), Gaps = 26/151 (17%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF----AGVARK--------SLL 98
              + Y   + EKA  FLKE  F  A E + +   +  +        +K          L
Sbjct: 253 PERIAYANTLKEKANNFLKESKFDSAIELYKRLDDELQYVVANGPTEQKELSGVTVAVQL 312

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
             A V     K  +     ++ +  + +++      + +G ++           +  +  
Sbjct: 313 NLALVYLKLCKPDKCIEFCKKVLDNFSDNEK---ALFRIGQAHLLR--------KDHEEA 361

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
           + Y  RIV +  N+     A   V +   ++
Sbjct: 362 VVYFKRIVTKNPNN---ASAVKQVQICEEEI 389


>gi|226467001|emb|CAX75981.1| hypothetical protein [Schistosoma japonicum]
          Length = 431

 Score = 42.8 bits (100), Expect = 0.055,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 51/151 (33%), Gaps = 26/151 (17%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF----AGVARK--------SLL 98
              + Y   + EKA  FLKE  F  A E + +   +  +        +K          L
Sbjct: 253 PERIAYANTLKEKANNFLKESKFDSAIELYKRLDDELQYVVANGPTEQKELSGVTVAVQL 312

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
             A V     K  +     ++ +  + +++      + +G ++           +  +  
Sbjct: 313 NLALVYLKLCKPDKCIEFCKKVLDNFSDNEK---ALFRIGQAHLLR--------KDHEEA 361

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
           + Y  RIV +  N+     A   V +   ++
Sbjct: 362 VVYFKRIVTKNPNN---ASAVKQVQICEEEI 389


>gi|119577819|gb|EAW57415.1| protein phosphatase 5, catalytic subunit, isoform CRA_a [Homo
           sapiens]
          Length = 485

 Score = 42.8 bits (100), Expect = 0.055,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 49/156 (31%), Gaps = 31/156 (19%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF-- 102
              +   ++   E+  +A  + K +++  A ++++Q     P        +S    A+  
Sbjct: 18  EPPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS---LAYLR 74

Query: 103 --VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
                Y+ G   +A  L ++YI            YY    S   +           +  L
Sbjct: 75  TECYGYALGDATRAIELDKKYIK----------GYYRRAASNMAL--------GKFRAAL 116

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           +    +V+   +      A+         +  K  E
Sbjct: 117 RDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 149


>gi|301119041|ref|XP_002907248.1| anaphase-promoting complex subunit 7, putative [Phytophthora
           infestans T30-4]
 gi|262105760|gb|EEY63812.1| anaphase-promoting complex subunit 7, putative [Phytophthora
           infestans T30-4]
          Length = 639

 Score = 42.8 bits (100), Expect = 0.055,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 22/70 (31%), Gaps = 4/70 (5%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           +  A L +++ N   A +         P      +     A+V     +Y +A     + 
Sbjct: 531 FALADLLVEDGNLRGAIDRLQALGERHP----REEVFTKLAYVYSMDKQYAEALKYYHQA 586

Query: 121 ITQYPESKNV 130
           +   P S   
Sbjct: 587 LRLNPGSTEA 596


>gi|198475829|ref|XP_002132507.1| GA27749 [Drosophila pseudoobscura pseudoobscura]
 gi|198137978|gb|EDY69909.1| GA27749 [Drosophila pseudoobscura pseudoobscura]
          Length = 954

 Score = 42.8 bits (100), Expect = 0.055,   Method: Composition-based stats.
 Identities = 17/162 (10%), Positives = 45/162 (27%), Gaps = 47/162 (29%)

Query: 109 KYQQAASLGEEYITQYP-----ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           +Y +A S  ++Y+           + +    Y +G++Y ++        R  K  ++   
Sbjct: 119 EYSEALSAYQKYLRFNQNNYWTNHEFI----YGIGIAYFKL--------RCFKWAIKSFQ 166

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAK--------------------EVEI----GRY 199
            ++    N          +                              E+ +       
Sbjct: 167 ELLYLNPNFTCANDVHLRLGFMLKHCGEYHIALKHLQLALLYTNPSTYSELHVKFQIAHL 226

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
           Y  + ++ AA   ++ +L           ++    + Y  L 
Sbjct: 227 YEVQNKHKAAKKAYEFLLNE------KNISLKLKADVYRQLG 262


>gi|254412886|ref|ZP_05026658.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
 gi|196180050|gb|EDX75042.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
          Length = 456

 Score = 42.8 bits (100), Expect = 0.055,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 61/192 (31%), Gaps = 56/192 (29%)

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM------IRDVP-- 149
           L      +  G Y+ A +   + +   P   ++   Y+  GMS+         I D    
Sbjct: 28  LSQGIASFQQGDYRHAIAALNQALQINP---DLAQAYHYRGMSHYCQGDALGAIGDFDEV 84

Query: 150 --YDQRATKL----------------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
              D +  +                  +Q  ++ ++   +S Y KG     ++ R  L  
Sbjct: 85  LRLDPQNAQAYSDRGLILATLNDRWGAMQDYNQALQL--DSNYAKGYLNR-SMLRLALED 141

Query: 192 KEVEIGR-------------YYLKRGEYVAAIPRFQLVLANYSDA-EHAEEAMAR---LV 234
            +  I                YL RG     I RF+  +  Y DA    + A+A    L 
Sbjct: 142 YDGAIADCDQVIRMNPNLAEGYLNRG-----IARFE--VEAYQDAIGDCDRALAINSNLA 194

Query: 235 EAYVALALMDEA 246
            AY    +   A
Sbjct: 195 AAYFNRGMNHIA 206


>gi|195110969|ref|XP_002000052.1| GI22745 [Drosophila mojavensis]
 gi|193916646|gb|EDW15513.1| GI22745 [Drosophila mojavensis]
          Length = 515

 Score = 42.8 bits (100), Expect = 0.055,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 45/149 (30%), Gaps = 26/149 (17%)

Query: 42  SSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLL 98
           +  D   D+        E Y  K    LK + FSKA + +++    +P +    A ++L 
Sbjct: 28  TKPDSATDATQHDFAAAEQYKNKGNELLKTKEFSKAIDMYSKAIELYPSSAIYYANRAL- 86

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATK 156
                      +  A   G   +   P      Y+  YY    ++  +           K
Sbjct: 87  ----AHLRQESFGLALQDGVSAVKTDPT-----YLKGYYRRAAAHMSL--------GKFK 129

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVG 185
             L     + +   N      A+   T  
Sbjct: 130 QALSDFEYVAKCRPNDK---DAKLKFTEC 155


>gi|186683976|ref|YP_001867172.1| hypothetical protein Npun_R3845 [Nostoc punctiforme PCC 73102]
 gi|186466428|gb|ACC82229.1| conserved hypothetical protein [Nostoc punctiforme PCC 73102]
          Length = 758

 Score = 42.8 bits (100), Expect = 0.055,   Method: Composition-based stats.
 Identities = 9/103 (8%), Positives = 32/103 (31%), Gaps = 5/103 (4%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           E  ++ LK+ N+  A       +        + ++ +         G+  +A ++ +  I
Sbjct: 10  EAGLIALKQGNYQTAIAQLEPIASSQNNGTASLQAQVGLVMAYARTGEVPKAIAISQNLI 69

Query: 122 TQYPESKNV-DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
                +  V ++      + +    +    + +  +       
Sbjct: 70  ESN--NPQVQEWAT--RALEHLTKRKKRDRESKNVETGFVAFD 108


>gi|18767668|gb|AAL54912.2|AF170083_1 putative transcriptional repressor [Candida albicans]
          Length = 1085

 Score = 42.8 bits (100), Expect = 0.055,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 38/130 (29%), Gaps = 22/130 (16%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGK 109
           D       Y    + +   +F+ AYE F Q        P              + Y   +
Sbjct: 358 DQSDAHSWYYLGRVEMIRGDFTAAYEAFQQAVNRDARNP-TFWC-----SIGVLYYQISQ 411

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSY---AQMIRDVPYDQRATKLMLQYMSRIV 166
           Y+ A       I   P    +  V+Y +G  Y      I D           L    +  
Sbjct: 412 YRDALDAYTRAIRLNP---YISEVWYDLGTLYETCNNQISD-------ALDALDAYRQAE 461

Query: 167 ERYTNSPYVK 176
               N+P++K
Sbjct: 462 RLDPNNPHIK 471


>gi|257466535|ref|ZP_05630846.1| hypothetical protein FgonA2_03743 [Fusobacterium gonidiaformans
           ATCC 25563]
 gi|315917690|ref|ZP_07913930.1| predicted protein [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691565|gb|EFS28400.1| predicted protein [Fusobacterium gonidiaformans ATCC 25563]
          Length = 610

 Score = 42.8 bits (100), Expect = 0.055,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 61/153 (39%), Gaps = 27/153 (17%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM---SAFVQYSAGKYQQAA- 114
           E+Y KA    +E+ + +AYE  +   R FP++ V +KS L     A +QY   + ++A  
Sbjct: 28  ELYLKAKKEYQEKKYQEAYETLSLLKRIFPYSRV-QKSKLSDYYLALIQYQLDQKEEAIR 86

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
            L    +  + E ++     YL+G  Y           +  K    Y  R++    +S Y
Sbjct: 87  GLTANILPLHTEERD-----YLLGTLYMNK--------KNPKQANLYFQRLL----SSEY 129

Query: 175 V---KGARFYV--TVGRNQLAAKEVEIGRYYLK 202
               +     +   + +N    +     ++Y  
Sbjct: 130 SYSHEKIEKKIEQILCKNNPYYQHYFAAKFYQN 162


>gi|257452674|ref|ZP_05617973.1| hypothetical protein F3_06374 [Fusobacterium sp. 3_1_5R]
 gi|317059214|ref|ZP_07923699.1| predicted protein [Fusobacterium sp. 3_1_5R]
 gi|313684890|gb|EFS21725.1| predicted protein [Fusobacterium sp. 3_1_5R]
          Length = 610

 Score = 42.8 bits (100), Expect = 0.055,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 61/153 (39%), Gaps = 27/153 (17%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM---SAFVQYSAGKYQQAA- 114
           E+Y KA    +E+ + +AYE  +   R FP++ V +KS L     A +QY   + ++A  
Sbjct: 28  ELYLKAKKEYQEKKYQEAYETLSLLKRIFPYSRV-QKSKLSDYYLALIQYQLDQKEEAIR 86

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
            L    +  + E ++     YL+G  Y           +  K    Y  R++    +S Y
Sbjct: 87  GLTANILPLHTEERD-----YLLGTLYMNK--------KNPKQANLYFQRLL----SSEY 129

Query: 175 V---KGARFYV--TVGRNQLAAKEVEIGRYYLK 202
               +     +   + +N    +     ++Y  
Sbjct: 130 SYSHEKIEKKIEQILCKNNPYYQHYFAAKFYQN 162


>gi|302879779|ref|YP_003848343.1| tol-pal system protein YbgF [Gallionella capsiferriformans ES-2]
 gi|302582568|gb|ADL56579.1| tol-pal system protein YbgF [Gallionella capsiferriformans ES-2]
          Length = 246

 Score = 42.8 bits (100), Expect = 0.055,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 37/99 (37%), Gaps = 14/99 (14%)

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
           +   +++Y  S ++  A +++   +  L               +Y  A+  ++ +L    
Sbjct: 150 LQEFIKKYPASVHIPNAAYWLGETQFAL--------------KDYKGALVTYRALLKASP 195

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           D   A + +  +  +   L  + +A   +  +  +YP  
Sbjct: 196 DTARAPDVLFGIAGSQQELKAVTQAAATLKQLVGKYPDS 234



 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 22/131 (16%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           A    + +A+  + A  Y  AA   +E+I +YP S ++    Y +G +   +        
Sbjct: 126 AENRAIEAAYSLFKAANYANAAKALQEFIKKYPASVHIPNAAYWLGETQFAL-------- 177

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           +  K  L     +++   ++       F +   + +L                   A   
Sbjct: 178 KDYKGALVTYRALLKASPDTARAPDVLFGIAGSQQEL--------------KAVTQAAAT 223

Query: 213 FQLVLANYSDA 223
            + ++  Y D+
Sbjct: 224 LKQLVGKYPDS 234


>gi|296108500|ref|YP_003620201.1| hypothetical protein lpa_04153 [Legionella pneumophila 2300/99
           Alcoy]
 gi|295650402|gb|ADG26249.1| Hypothetical protein lpa_04153 [Legionella pneumophila 2300/99
           Alcoy]
          Length = 245

 Score = 42.8 bits (100), Expect = 0.056,   Method: Composition-based stats.
 Identities = 10/70 (14%), Positives = 25/70 (35%), Gaps = 8/70 (11%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
            A    +  ++ +A + FN+            +            GKY++A    ++ + 
Sbjct: 55  AASAAYRAGDYEQAAKLFNELK--------TEQGYYNQGNALAHLGKYEEAIRAYDKALA 106

Query: 123 QYPESKNVDY 132
             P +++  Y
Sbjct: 107 FNPNNQDALY 116


>gi|241754900|ref|XP_002412534.1| tetratricopeptide repeat protein, tpr, putative [Ixodes scapularis]
 gi|215506093|gb|EEC15587.1| tetratricopeptide repeat protein, tpr, putative [Ixodes scapularis]
          Length = 218

 Score = 42.8 bits (100), Expect = 0.056,   Method: Composition-based stats.
 Identities = 18/132 (13%), Positives = 40/132 (30%), Gaps = 28/132 (21%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
             +     +  ++ Y+          + +A + +N+  +  P              + Y 
Sbjct: 106 EKNEFEKHQAAKKYYDAGQALALRGRYEEAIKEYNKAIKLKP----------DEDVLYYK 155

Query: 107 AGK-------YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
            G        Y++A    ++ I+  P  +  D  Y   G S+         D    +  L
Sbjct: 156 KGNSLAFLGRYEEAIECYDKSISLNP--EYAD-AYNNKGNSFF--------DLEKYEEAL 204

Query: 160 QYMSRIVERYTN 171
               + +E   N
Sbjct: 205 VEYDKAIELKPN 216


>gi|218438596|ref|YP_002376925.1| hypothetical protein PCC7424_1618 [Cyanothece sp. PCC 7424]
 gi|218171324|gb|ACK70057.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424]
          Length = 217

 Score = 42.8 bits (100), Expect = 0.056,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 46/152 (30%), Gaps = 21/152 (13%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
            KF L +   +A+      +  +++D             E+ +      K +N+++A   
Sbjct: 6   KKFNLFLPALLALSITAIPQMGNAQD-------SAPSLEELIQLGNQAAKSKNYAQAERL 58

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
           F    + +P       +    A   Y  GK ++A +     I   PE             
Sbjct: 59  FYNAVKLYPNYP---AAYYNLAKALYDQGKLEEAETNYRRAILLNPEYAEA--------- 106

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
                +  V  DQ   +  +    R +     
Sbjct: 107 --YNNLGSVLSDQGKLEEAIINFERAIHFNPQ 136


>gi|291279654|ref|YP_003496489.1| hypothetical protein DEFDS_1266 [Deferribacter desulfuricans SSM1]
 gi|290754356|dbj|BAI80733.1| hypothetical protein [Deferribacter desulfuricans SSM1]
          Length = 900

 Score = 42.8 bits (100), Expect = 0.056,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 77/238 (32%), Gaps = 68/238 (28%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
            ++N+ K   YF +    +P +    ++LL+ A        YQ      +   T Y +SK
Sbjct: 677 DKENYIKYINYFFK---KYPNSKYQSEALLLRANFYEKNKLYQNCVIDAD---TAYKKSK 730

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV------------- 175
           N +   ++       +           K   +    ++E+ +   YV             
Sbjct: 731 NNE-ALFVKAKCLKYIDN---------KKAYEIFKMLLEKSSGYEYVSRKEIIDLSNDAE 780

Query: 176 --------------------------------KGARFYVTVGRNQLAAKEVEIGRYYLK- 202
                                           + +  Y+         K+      Y K 
Sbjct: 781 EVLTNSLFFKDKDINLYYHGLERYLNLLKTIGEDSYQYIMELLES-GDKDFVPAGLYFKG 839

Query: 203 -----RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
                + +Y+ A+  F  V   + D+++ ++++    + Y+ +   D+A ++  ++++
Sbjct: 840 VYLFNKKDYIYALKHFLKVYYLFKDSKYVKKSLEYAKDCYLKMGKKDKAEKIEKILKK 897


>gi|27734076|ref|NP_775555.1| prolyl 3-hydroxylase 2 precursor [Mus musculus]
 gi|81866302|sp|Q8CG71|P3H2_MOUSE RecName: Full=Prolyl 3-hydroxylase 2; AltName: Full=Leprecan-like
           protein 1; Flags: Precursor
 gi|27527202|emb|CAD23038.1| leprecan-like 1 protein [Mus musculus]
          Length = 703

 Score = 42.8 bits (100), Expect = 0.056,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 33/68 (48%), Gaps = 6/68 (8%)

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           F  Y  G+Y +A    + Y+  +P++++V     L  + + + + D   D  A+    + 
Sbjct: 309 FAYYRVGEYVKALECAKAYLMFHPDNEDV-----LDNVDFYESLLDDSTDP-ASIEARED 362

Query: 162 MSRIVERY 169
           ++  V+R+
Sbjct: 363 LTAFVKRH 370


>gi|77464238|ref|YP_353742.1| hypothetical protein RSP_0667 [Rhodobacter sphaeroides 2.4.1]
 gi|126463080|ref|YP_001044194.1| hypothetical protein Rsph17029_2320 [Rhodobacter sphaeroides ATCC
           17029]
 gi|77388656|gb|ABA79841.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
 gi|126104744|gb|ABN77422.1| conserved hypothetical protein [Rhodobacter sphaeroides ATCC 17029]
          Length = 274

 Score = 42.8 bits (100), Expect = 0.056,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 40/126 (31%), Gaps = 10/126 (7%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ-QAASLGEE 119
           +++A   L + +F  A + F   +  +    +  ++  +        G+    A +  E 
Sbjct: 155 FDRAQEVLGQGDFRTAADLFKTFAETYTGGQLTYEAHYLRGEALSRLGETANAARAYLES 214

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           +    P+          +G +          D R T      ++ +  R+  SP    A 
Sbjct: 215 FSGD-PDGPRAPEALLKLGRALG--------DLRQTPEACVTLAEVGTRFPGSPSAAEAA 265

Query: 180 FYVTVG 185
             +   
Sbjct: 266 TTMQGL 271



 Score = 38.6 bits (89), Expect = 0.93,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 35/123 (28%), Gaps = 20/123 (16%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           Q   +          E YT       A +      ++L                      
Sbjct: 164 QGDFRTAADLFKTFAETYTGGQLTYEAHYLRGEALSRLGE-----------------TAN 206

Query: 212 RFQLVLANY---SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
             +  L ++    D   A EA+ +L  A   L    EA   ++ +  R+P    A    T
Sbjct: 207 AARAYLESFSGDPDGPRAPEALLKLGRALGDLRQTPEACVTLAEVGTRFPGSPSAAEAAT 266

Query: 269 LVK 271
            ++
Sbjct: 267 TMQ 269


>gi|127512458|ref|YP_001093655.1| TPR repeat-containing protein [Shewanella loihica PV-4]
 gi|126637753|gb|ABO23396.1| Tetratricopeptide TPR_2 repeat protein [Shewanella loihica PV-4]
          Length = 240

 Score = 42.8 bits (100), Expect = 0.057,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 43/129 (33%), Gaps = 22/129 (17%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
              +Y +A     E+I QYP S       Y +G                     +  + +
Sbjct: 132 KERQYDEAIPAFREFIAQYPNSTYAANANYWLGQLLYNK--------GELAEAGKAFNTV 183

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           V ++  S     +   + +                 KR +  AA   +Q V++ Y+++  
Sbjct: 184 VNQFKESNKRGDSLVKLGMIAQ--------------KRNDNAAAKRYYQQVVSEYANSAA 229

Query: 226 AEEAMARLV 234
           A  A  ++V
Sbjct: 230 ARIAKQQMV 238



 Score = 39.7 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 50/128 (39%), Gaps = 13/128 (10%)

Query: 61  YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           YE+AV   LKE+ + +A   F +    +P +  A  +      + Y+ G+  +A      
Sbjct: 123 YERAVNLVLKERQYDEAIPAFREFIAQYPNSTYAANANYWLGQLLYNKGELAEAGKAFNT 182

Query: 120 YITQYPESKNVDYVYYLVG--MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
            + Q+ ES          G  +    MI     D  A K   +Y  ++V  Y NS   + 
Sbjct: 183 VVNQFKESNK-------RGDSLVKLGMIAQKRNDNAAAK---RYYQQVVSEYANSAAARI 232

Query: 178 ARFYVTVG 185
           A+  +   
Sbjct: 233 AKQQMVGL 240



 Score = 39.7 bits (92), Expect = 0.41,   Method: Composition-based stats.
 Identities = 16/128 (12%), Positives = 39/128 (30%), Gaps = 14/128 (10%)

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           +  +   ++   +R     +      + +Y NS Y   A +++                 
Sbjct: 121 ASYERAVNLVLKERQYDEAIPAFREFIAQYPNSTYAANANYWLGQLL------------- 167

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
              +GE   A   F  V+  + ++    +++ +L            A+     +   Y  
Sbjct: 168 -YNKGELAEAGKAFNTVVNQFKESNKRGDSLVKLGMIAQKRNDNAAAKRYYQQVVSEYAN 226

Query: 260 GYWARYVE 267
              AR  +
Sbjct: 227 SAAARIAK 234


>gi|315587165|gb|ADU41546.1| paralysed flagella protein [Helicobacter pylori 35A]
          Length = 803

 Score = 42.8 bits (100), Expect = 0.057,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 50/137 (36%), Gaps = 9/137 (6%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             +T   Y    Y +A   +  Q +  A    ++  +++P     +   L+        G
Sbjct: 188 PLLTTKGYDLNAYLEAKKQINSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIALGQLG 247

Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            K      +G ++I  YP   ++  V Y V  +  +            K  ++Y  RI+ 
Sbjct: 248 IKRSLLIDIGAKWIKNYPTDPSIPEVLYYVAKALDEN--------NNYKQAMRYYKRILL 299

Query: 168 RYTNSPYVKGARFYVTV 184
            Y +S Y   A+  + +
Sbjct: 300 EYKDSRYAPLAQMRLAI 316



 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 31/99 (31%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
             + RA   +    ++   + L I     +                +  TD      +Y 
Sbjct: 217 RTISRAFKNYPQTIFKKDLYLLEIIALGQLGIKRSLLIDIGAKWIKNYPTDPSIPEVLYY 276

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
            A    +  N+ +A  Y+ +   ++  +  A  + +  A
Sbjct: 277 VAKALDENNNYKQAMRYYKRILLEYKDSRYAPLAQMRLA 315


>gi|241998476|ref|XP_002433881.1| O-linked N-acetylglucosamine transferase, OGT, putative [Ixodes
           scapularis]
 gi|215495640|gb|EEC05281.1| O-linked N-acetylglucosamine transferase, OGT, putative [Ixodes
           scapularis]
          Length = 832

 Score = 42.8 bits (100), Expect = 0.057,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 25/77 (32%), Gaps = 2/77 (2%)

Query: 38  WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
             +  S  +      +      ++    L+  E  + +A   + +     P      +SL
Sbjct: 579 CAQLDSAGLKDPKTHESTKISALFNLGRLYADEGKYKEAIRVYQEAVAKMP-DHYQPQSL 637

Query: 98  L-MSAFVQYSAGKYQQA 113
             M     +  G+Y +A
Sbjct: 638 YNMMGEAYFKLGEYTEA 654



 Score = 40.5 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 2/56 (3%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA-RLVEAYVALALMDEARE 248
             +GR Y   G+Y  AI  +Q  +A   D  +  +++   + EAY  L    EA  
Sbjct: 602 FNLGRLYADEGKYKEAIRVYQEAVAKMPD-HYQPQSLYNMMGEAYFKLGEYTEAER 656


>gi|148665269|gb|EDK97685.1| leprecan-like 1 [Mus musculus]
          Length = 540

 Score = 42.8 bits (100), Expect = 0.057,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 33/68 (48%), Gaps = 6/68 (8%)

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           F  Y  G+Y +A    + Y+  +P++++V     L  + + + + D   D  A+    + 
Sbjct: 146 FAYYRVGEYVKALECAKAYLMFHPDNEDV-----LDNVDFYESLLDDSTDP-ASIEARED 199

Query: 162 MSRIVERY 169
           ++  V+R+
Sbjct: 200 LTAFVKRH 207


>gi|150398038|ref|YP_001328505.1| tetratricopeptide TPR_4 [Sinorhizobium medicae WSM419]
 gi|150029553|gb|ABR61670.1| Tetratricopeptide TPR_4 [Sinorhizobium medicae WSM419]
          Length = 420

 Score = 42.8 bits (100), Expect = 0.057,   Method: Composition-based stats.
 Identities = 42/216 (19%), Positives = 69/216 (31%), Gaps = 46/216 (21%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA--GKYQQAASLGEE 119
           E+AV      +F  A   + Q  R  P    AR  L            G+Y +A    E 
Sbjct: 194 ERAVALHAFGDFDGAEAGYRQLIRTVPGHVEARFRL-----AHLLNDVGEYDEA----EH 244

Query: 120 YIT-QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           +     P   N D V + +G        D    Q   +   +    ++ R+         
Sbjct: 245 FYRTLLPTVPNPDDVLHWIG--------DTQMAQGFYRKASKTFQELLVRHPQ-----RG 291

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA------EEAMAR 232
                +    LA+          +R   VAA   F  VL++  D  H       +E ++R
Sbjct: 292 AVRYKLAVAHLASG---------RRDAAVAAFESFDDVLSD--DTNHVLCRAKAQEILSR 340

Query: 233 LVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           L +    +   D   +     Q+  P   WA + + 
Sbjct: 341 LKDV-AGMGEQDGEEQHD---QKGQPSLSWAPFGDE 372


>gi|320165966|gb|EFW42865.1| phosphoprotein [Capsaspora owczarzaki ATCC 30864]
          Length = 1153

 Score = 42.8 bits (100), Expect = 0.058,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 41/109 (37%), Gaps = 12/109 (11%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           K +LFL   N+ +A   F   +   P       +L+  A   Y+  ++++A  L    + 
Sbjct: 139 KGMLFLLRNNYERAATQFRYVTAQNPAH---IPALMGQACAAYNLKQFKEALGLYRRVLR 195

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
             P   +   V Y +G+   ++        +  +       R++E   +
Sbjct: 196 INPTG-SAAIVRYGIGVCLFKL--------KDLERAQLAFKRVLELVPD 235


>gi|255318933|ref|ZP_05360158.1| conserved hypothetical protein [Acinetobacter radioresistens SK82]
 gi|262378329|ref|ZP_06071486.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
 gi|255303950|gb|EET83142.1| conserved hypothetical protein [Acinetobacter radioresistens SK82]
 gi|262299614|gb|EEY87526.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
          Length = 274

 Score = 42.8 bits (100), Expect = 0.058,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 41/118 (34%), Gaps = 13/118 (11%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           Q   K  +  M   ++ + NS Y   A F+       LA   + +     +   Y  A  
Sbjct: 169 QGGAKKAIAPMQNFIKNHPNSIYTGNAYFW-------LAEFNLAV-----EPPNYKEAKK 216

Query: 212 RFQLVLANYSDAEHAEEAMARLVE-AYVALALMDEAREVVSLIQERYPQGYWARYVET 268
            + +V   Y  +  A  A+ +L   A         A    + +   YP+   A Y ++
Sbjct: 217 NYAIVADQYPTSAKASRALYQLYSIAKDVDKDTASANRFKNKLISTYPKSEEAGYFKS 274



 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 44/149 (29%), Gaps = 21/149 (14%)

Query: 36  VGWERQSSRDVYLDSVTDVRY--QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
           +     SS     +S T      ++  Y  A+   K+    KA        ++ P +   
Sbjct: 133 IASNSTSSNLPQGNSSTQAPSDLEKAAYTVALDAYKQGGAKKAIAPMQNFIKNHPNSIYT 192

Query: 94  RKSLLMSAF-------VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
             +    A          Y   K   A         QYP S       Y +      + +
Sbjct: 193 GNAYFWLAEFNLAVEPPNYKEAKKNYAIVA-----DQYPTSAKASRALYQL----YSIAK 243

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYV 175
           DV  D   T    ++ ++++  Y  S   
Sbjct: 244 DVDKD---TASANRFKNKLISTYPKSEEA 269



 Score = 38.9 bits (90), Expect = 0.69,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 25/65 (38%), Gaps = 7/65 (10%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY----ITQYPES 127
           N+ +A + +   +  +P +  A ++L    +          A      +    I+ YP+S
Sbjct: 210 NYKEAKKNYAIVADQYPTSAKASRALYQL-YSIAKDVDKDTA--SANRFKNKLISTYPKS 266

Query: 128 KNVDY 132
           +   Y
Sbjct: 267 EEAGY 271



 Score = 38.9 bits (90), Expect = 0.74,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 45/123 (36%), Gaps = 21/123 (17%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y  G  ++A +  + +I  +P S      Y+   ++   +  + P      K   +  + 
Sbjct: 167 YKQGGAKKAIAPMQNFIKNHPNSIYTGNAYFW--LAEFNLAVEPP----NYKEAKKNYAI 220

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL-VLANYSDA 223
           + ++Y  S     A + +             I +      +  A+  RF+  +++ Y  +
Sbjct: 221 VADQYPTSAKASRALYQL-----------YSIAK---DVDKDTASANRFKNKLISTYPKS 266

Query: 224 EHA 226
           E A
Sbjct: 267 EEA 269


>gi|254522146|ref|ZP_05134201.1| Polysaccharide deacetylase domain protein [Stenotrophomonas sp.
           SKA14]
 gi|219719737|gb|EED38262.1| Polysaccharide deacetylase domain protein [Stenotrophomonas sp.
           SKA14]
          Length = 890

 Score = 42.8 bits (100), Expect = 0.058,   Method: Composition-based stats.
 Identities = 18/136 (13%), Positives = 45/136 (33%), Gaps = 14/136 (10%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
             +D +  ++  ++ +   +E+ + +A   F +  +  P    A ++     FV Y   +
Sbjct: 769 PASDRQRAQQANDRGLQLYREKQYDEAAAQFTEALKLRP--DFA-QAANNLGFVYYRQQR 825

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y +AA   E  +   P             +++  +  D  ++        Q  +  +   
Sbjct: 826 YAEAARWLENTLKIDPS----------RAVAHLNL-GDAYFNAGDKPKARQAYTTYLALQ 874

Query: 170 TNSPYVKGARFYVTVG 185
                   AR  +   
Sbjct: 875 PQGSGAAQARAQLEKL 890


>gi|171320624|ref|ZP_02909644.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria
           MEX-5]
 gi|171094137|gb|EDT39224.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria
           MEX-5]
          Length = 285

 Score = 42.8 bits (100), Expect = 0.058,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 34/100 (34%), Gaps = 4/100 (4%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
                T+ F+  +  L G      +     S      Q E+   A   L   N   A   
Sbjct: 3   RSVICTLAFAAVLPVLAGGCAPGIQTRPALSHKSDDPQAEL-RIADSALAGGNVELASTL 61

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           + +     P + +A  + L    V Y AG  ++A  L E+
Sbjct: 62  YGKVLARHPDS-LA--AQLGLGDVNYRAGDLERARILYEQ 98


>gi|15668984|ref|NP_247788.1| hypothetical protein MJ_0798 [Methanocaldococcus jannaschii DSM
           2661]
 gi|2833599|sp|Q58208|Y798_METJA RecName: Full=TPR repeat-containing protein MJ0798
 gi|1499620|gb|AAB98793.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
           2661]
          Length = 334

 Score = 42.8 bits (100), Expect = 0.058,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 63/197 (31%), Gaps = 38/197 (19%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +K    LK      A +YF +        +     K+L       Y     + +    E+
Sbjct: 140 KKGYALLKLYKRDLAIKYFEKASEKDRNNY-----KALFGLGKSYYLMSDNKNSIKYFEK 194

Query: 120 YITQYPES-KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            +   P   + ++Y    +G  Y +            +  + Y  + +E   +       
Sbjct: 195 VLELNPNDVEALEY----LGELYYE---------EDCEKAINYFKKALELKPDD------ 235

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
              + +         +++   Y K  +Y  A+  F+  L    +    E+    +   Y+
Sbjct: 236 ---IDLI--------LKVAFTYFKLKKYKHALKYFEKALKLNPNVFELEQIYESMGRIYI 284

Query: 239 ALALMDEAREVVSLIQE 255
            L   ++A E    ++E
Sbjct: 285 YLGEDEKAIECFEKLKE 301


>gi|113476308|ref|YP_722369.1| glycosyl transferase family protein [Trichodesmium erythraeum
           IMS101]
 gi|110167356|gb|ABG51896.1| glycosyl transferase, family 2 [Trichodesmium erythraeum IMS101]
          Length = 1486

 Score = 42.8 bits (100), Expect = 0.058,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 64/202 (31%), Gaps = 25/202 (12%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
             A ++ +     +A EY  Q  R  P      +  L +       GK +QA +  ++ I
Sbjct: 384 NLAKIYTQVNKSQEAAEYLYQAIRLEP-GKATAQDFLFTGNTLSENGKLEQAIACYQQLI 442

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
           +  P S               + + D    Q   +L LQ      +      Y    +  
Sbjct: 443 SADPNSFEA-----------YEKLGDSLLKQGQLELSLQNYKNAQKLKP---YSTEIKQK 488

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
           +              G Y+ K+ +   A+  ++  + NY   +       +L E +    
Sbjct: 489 IGEIY-------YRYGEYFQKKEKVEEAVKAYRQAIENYPQYDIPY---GKLGEVFSQQE 538

Query: 242 LMDEAREVVSLIQERYPQGYWA 263
             +EA +V     +  P   W 
Sbjct: 539 KWEEAVKVYEKASQIKPDNSWY 560


>gi|162453309|ref|YP_001615675.1| translation initiation factor IF-2, chloroplast precursor
           [Sorangium cellulosum 'So ce 56']
          Length = 358

 Score = 42.8 bits (100), Expect = 0.058,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 30/77 (38%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           R +  +   A   L+  + + A     Q    FP   +A++   ++    + +G    AA
Sbjct: 275 REELTLLGDARAALRRGDAAGALRIAEQARLRFPGGALAQEREALTIEALWQSGDRAAAA 334

Query: 115 SLGEEYITQYPESKNVD 131
                ++  YP S +V 
Sbjct: 335 QRASAFLVAYPSSPHVP 351


>gi|304382533|ref|ZP_07365028.1| conserved hypothetical protein [Prevotella marshii DSM 16973]
 gi|304336364|gb|EFM02605.1| conserved hypothetical protein [Prevotella marshii DSM 16973]
          Length = 854

 Score = 42.4 bits (99), Expect = 0.059,   Method: Composition-based stats.
 Identities = 9/69 (13%), Positives = 21/69 (30%), Gaps = 4/69 (5%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           E       + N+ +A + + +  +     GV+           Y      +A    E   
Sbjct: 630 ENGDKEYAKGNYQQAIKDYEEVLK----GGVSADIYYNLGNAYYRIDNIPRAVLAYERAA 685

Query: 122 TQYPESKNV 130
              P  +++
Sbjct: 686 LLSPGDRDI 694


>gi|283781939|ref|YP_003372694.1| hypothetical protein Psta_4185 [Pirellula staleyi DSM 6068]
 gi|283440392|gb|ADB18834.1| hypothetical protein Psta_4185 [Pirellula staleyi DSM 6068]
          Length = 348

 Score = 42.4 bits (99), Expect = 0.059,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 77/244 (31%), Gaps = 24/244 (9%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVL----FLKEQNFSKAYEYFN 81
              +  +    G ++ ++    LD V         Y  A       +    +++A +Y+ 
Sbjct: 120 ALVAAKLAMTEGGDKAAAEKALLDFVRANSANWHFYAAAESLGDLAVSSGKYAEAAKYYG 179

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
             +   PF     K+         +  +Y  A +  +  I     S +         ++ 
Sbjct: 180 PIAA-APFGEYQMKANNSIGRALTAQKQYPDAITRFDAVID---GSLSTPEAAQQKTLAS 235

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL-AAKEVEIGRYY 200
                 +     AT    + ++ +                       L A     +G  Y
Sbjct: 236 IGKAVCL----AATGKADEGLTIV----------NDIIAKNDPADVTLFARAYNALGNCY 281

Query: 201 LKRGEYVAAIPRF-QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           LK G+   A+  F    +  Y+D+E   EA+  L + +      D A    + ++ERY  
Sbjct: 282 LKTGKNKDALQAFLHTDILFYADSESHAEALYHLSKLWATEEKPDRATAARTTLRERYSG 341

Query: 260 GYWA 263
             WA
Sbjct: 342 SVWA 345


>gi|312109539|ref|YP_003987855.1| hypothetical protein GY4MC1_0403 [Geobacillus sp. Y4.1MC1]
 gi|311214640|gb|ADP73244.1| Tetratricopeptide repeat protein [Geobacillus sp. Y4.1MC1]
          Length = 492

 Score = 42.4 bits (99), Expect = 0.059,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 35/89 (39%), Gaps = 10/89 (11%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSA 101
            D   D   D+  Q+E   +A L L+++ F +A          +P  ++          A
Sbjct: 141 EDENGDEQDDLITQQE---RARLLLEKEKFPEAIRLLEMIIDRYPEFWSAYN-----NLA 192

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNV 130
              +  G  Q+A  + E+ + + P + + 
Sbjct: 193 LAYFYNGNVQKAQEIIEQVLERNPGNLHA 221



 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 80/214 (37%), Gaps = 32/214 (14%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
            ++K +   ++++  KA +Y       D   A  A +     A V    G+YQ +     
Sbjct: 24  YFKKGMQAYQQRDLYKAKKYLERAVQYDGNNASFALQ----LASVLAELGEYQASNQWL- 78

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            +   +   + +D  +Y +  ++A +              ++Y    + R  +  + +  
Sbjct: 79  -FKIIHELDETMDECFYFLANNFAHL--------GLFHEAMKYAETYLARDPDGHFAEDT 129

Query: 179 RFYVTVGR------------NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
              + + +            + +  +E    R  L++ ++  AI   ++++  Y +   A
Sbjct: 130 EDLMELLKIDQEDENGDEQDDLITQQER--ARLLLEKEKFPEAIRLLEMIIDRYPEFWSA 187

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
              +A    AY     + +A+E++  + ER P  
Sbjct: 188 YNNLAL---AYFYNGNVQKAQEIIEQVLERNPGN 218


>gi|255725838|ref|XP_002547845.1| serine/threonine-protein phosphatase T [Candida tropicalis
           MYA-3404]
 gi|240133769|gb|EER33324.1| serine/threonine-protein phosphatase T [Candida tropicalis
           MYA-3404]
          Length = 418

 Score = 42.4 bits (99), Expect = 0.059,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 47/161 (29%), Gaps = 47/161 (29%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASL 116
           ++ ++   +LK+  F +A E + +  +  P      + ++ +           Y  A   
Sbjct: 8   KLKDQGNAYLKDHKFDQAIESYTEAIKLDPKNAIFYSNRAQV-----HIKLENYGLAIQD 62

Query: 117 GE-------EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            +        ++            YY  G+S   +++         K   Q    I+ + 
Sbjct: 63  CDSAISIDSNFLK----------AYYRKGVSLMAILQ--------YKQAQQNFKFILNKL 104

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
            N               N            YLKR  +  AI
Sbjct: 105 PNDKLTLENYK---QCTN------------YLKRQAFEKAI 130


>gi|332559127|ref|ZP_08413449.1| tol-pal system protein YbgF [Rhodobacter sphaeroides WS8N]
 gi|332276839|gb|EGJ22154.1| tol-pal system protein YbgF [Rhodobacter sphaeroides WS8N]
          Length = 274

 Score = 42.4 bits (99), Expect = 0.059,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 40/126 (31%), Gaps = 10/126 (7%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ-QAASLGEE 119
           +++A   L + +F  A + F   +  +    +  ++  +        G+    A +  E 
Sbjct: 155 FDRAQEVLGQGDFRTAADLFKTFAETYTGGQLTYEAHYLRGEALSQLGETANAARAYLES 214

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           +    P+          +G +          D R T      ++ +  R+  SP    A 
Sbjct: 215 FSGD-PDGPRAPEALLKLGRALG--------DLRQTPEACVTLAEVGTRFPGSPSAAEAA 265

Query: 180 FYVTVG 185
             +   
Sbjct: 266 TTMQGL 271



 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 35/123 (28%), Gaps = 20/123 (16%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           Q   +          E YT       A +      +QL                      
Sbjct: 164 QGDFRTAADLFKTFAETYTGGQLTYEAHYLRGEALSQLGE-----------------TAN 206

Query: 212 RFQLVLANY---SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
             +  L ++    D   A EA+ +L  A   L    EA   ++ +  R+P    A    T
Sbjct: 207 AARAYLESFSGDPDGPRAPEALLKLGRALGDLRQTPEACVTLAEVGTRFPGSPSAAEAAT 266

Query: 269 LVK 271
            ++
Sbjct: 267 TMQ 269


>gi|322436089|ref|YP_004218301.1| Tetratricopeptide TPR_1 repeat-containing protein [Acidobacterium
           sp. MP5ACTX9]
 gi|321163816|gb|ADW69521.1| Tetratricopeptide TPR_1 repeat-containing protein [Acidobacterium
           sp. MP5ACTX9]
          Length = 730

 Score = 42.4 bits (99), Expect = 0.059,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 61/204 (29%), Gaps = 34/204 (16%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
           T+  +     +     ++  +V    +T+V          +  L    F++A E F+Q  
Sbjct: 477 TVTLASGSLHIDAGVNEAKGEVLPAGLTEVLRWN---NYGIGMLDRLQFAEAVEAFHQVL 533

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
           +  P         +  A  +YS G+Y +A    +  +   P         Y  G+     
Sbjct: 534 KLDP--KYQP-GYVNVAVGEYSRGRYDEALRWLDRGLQMDPADAR---AMYFKGLCL--- 584

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
                  Q      +  +  + ++Y                  +L       G  Y+ R 
Sbjct: 585 -----RWQTHFDEAIAVLEPVAKQYP----------RFRQVHQEL-------GYVYMVRR 622

Query: 205 EYVAAIPRFQLVLANYSDAEHAEE 228
            +  A   ++ VL    D   A  
Sbjct: 623 RFPEAKAEYEAVLKIDPDDPVAHR 646


>gi|227538150|ref|ZP_03968199.1| possible outer membrane protein [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227241993|gb|EEI92008.1| possible outer membrane protein [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 628

 Score = 42.4 bits (99), Expect = 0.059,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 41/122 (33%), Gaps = 19/122 (15%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYS 106
             +     +++Y  A   L++  +  A E      +   +F  +            +   
Sbjct: 20  KPSGNAKAQQLYTSANRHLQKGEYPPAIELLKEALKIDGNFA-SAYQT-----LGDLYRK 73

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
           A +Y++A  + E+ +T  PE         L  ++Y   I +        K  L Y+    
Sbjct: 74  ADQYEEARQMYEKVLTTDPE---------LTPLTYFG-IGESSLFTGHYKEALNYLETYK 123

Query: 167 ER 168
            +
Sbjct: 124 NK 125


>gi|227537547|ref|ZP_03967596.1| gliding motility-related protein; TPR repeat-containing protein
           [Sphingobacterium spiritivorum ATCC 33300]
 gi|227242599|gb|EEI92614.1| gliding motility-related protein; TPR repeat-containing protein
           [Sphingobacterium spiritivorum ATCC 33300]
          Length = 1023

 Score = 42.4 bits (99), Expect = 0.060,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 30/79 (37%), Gaps = 10/79 (12%)

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
            +  Y      +A    E ++ +YP +     VY+    S  +M   +          L 
Sbjct: 586 IYRDY-TKDPTEAIKAYENFLDRYPNTPAAAEVYF----SLYRMYEGIDK-----TKSLA 635

Query: 161 YMSRIVERYTNSPYVKGAR 179
           Y ++++  + N+ +   A+
Sbjct: 636 YKNKLITLFPNTIHAHVAQ 654


>gi|329942368|ref|ZP_08291178.1| tetratricopeptide repeat family protein [Chlamydophila psittaci
           Cal10]
 gi|332287010|ref|YP_004421911.1| tetratricopeptide repeat protein [Chlamydophila psittaci 6BC]
 gi|313847606|emb|CBY16594.1| conserved hypothetical protein [Chlamydophila psittaci RD1]
 gi|325506936|gb|ADZ18574.1| tetratricopeptide repeat protein [Chlamydophila psittaci 6BC]
 gi|328815278|gb|EGF85266.1| tetratricopeptide repeat family protein [Chlamydophila psittaci
           Cal10]
 gi|328914240|gb|AEB55073.1| type III secretion chaperone, putative [Chlamydophila psittaci 6BC]
          Length = 335

 Score = 42.4 bits (99), Expect = 0.060,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 65/201 (32%), Gaps = 34/201 (16%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D    + +Y KAV+     N  +A        R  P      K+ +   ++     ++ +
Sbjct: 141 DPWNPQSLYNKAVVLTDMNNEQEAIVLLETTVRKNPL-YW--KAWIKLGYLLSRHKQWDK 197

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A    E  +   P   ++   +Y +G+ Y  + +        T+L L+     +      
Sbjct: 198 ATEAYERVVQLRP---DLSDGHYNLGLCYLTLDK--------TRLALKAFQEAL------ 240

Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
                          + A     +G  Y+   +   A   F   L    + EH E +   
Sbjct: 241 -----------FLNEEDADAHFYVGLAYMDLKQNRQASDAFHRALGI--NLEH-ERSHYL 286

Query: 233 LVEAYVALALMDEAREVVSLI 253
           L   Y      ++A + +S +
Sbjct: 287 LGYLYHMEGQFEKAEKELSFL 307


>gi|206603339|gb|EDZ39819.1| Protein of unknown function [Leptospirillum sp. Group II '5-way
           CG']
          Length = 231

 Score = 42.4 bits (99), Expect = 0.060,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 71/226 (31%), Gaps = 53/226 (23%)

Query: 50  SVTDVRYQREVYEKA-VLFLKEQNFSKAY----EYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           S +     +  YE   +  L   +  KA     +             + ++  +  A   
Sbjct: 17  SPSSPLAGKAFYELGRMDDLYGNDPQKAAGHYMKSLENLKD----GSIRQRVSIDLATDL 72

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP---YDQRA------- 154
              GK  +A ++                   L G+  + ++       +D  A       
Sbjct: 73  EHLGKPDEALAI-------------------LRGLDGSNLLSTFEPRVWDLTARILEHEG 113

Query: 155 -TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
             +  L Y  ++ +R  +S   + A+F + +    LA  ++       +R      + RF
Sbjct: 114 HYREALGYYKKVSDREPDSFRGQKAQFKIGLL-ESLA-SDLPSA----QRD-----LGRF 162

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
              +  Y D+     A   L   +  L    +A  ++  I+  YP 
Sbjct: 163 ---VKRYPDSPFTPVARFNLALTWDRLGDHQKALSILESIKGSYPN 205


>gi|75910689|ref|YP_324985.1| hypothetical protein Ava_4492 [Anabaena variabilis ATCC 29413]
 gi|75704414|gb|ABA24090.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
          Length = 605

 Score = 42.4 bits (99), Expect = 0.060,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 43/128 (33%), Gaps = 18/128 (14%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAF 102
           D  L S  +       Y + +      N+ +A     Q  +  P+  A  + +  +    
Sbjct: 135 DPLLASNINEDIANAYYYRGLHNSDHGNYQEAIIDLQQALQWHPYFAAAYSIRGNI---- 190

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y  G+Y+QA +  E  +       N+   Y   G +Y  +         A +  +   
Sbjct: 191 -YYKLGEYRQAIADHERAVQL---DPNLAEAYQNRGNAYYAL--------GAYQKAIADY 238

Query: 163 SRIVERYT 170
           +R +E   
Sbjct: 239 NRTLEINP 246



 Score = 35.5 bits (81), Expect = 9.1,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 62/208 (29%), Gaps = 35/208 (16%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           +++  A  +FN      P    A ++       +Y    +  A +  ++ +   P     
Sbjct: 51  KDYQGAIAFFNLAVEINP--NYA-QAYYHRGNARYCLADFTAAIADYDQALQINPT--FA 105

Query: 131 DYVYYLVGMSYAQM----------IRDVPYDQRATKL-----MLQYMSRIVERYTNSPYV 175
           +Y YY  G +Y             I  + +D              Y  R +    +  Y 
Sbjct: 106 EY-YYCRGNAYLAQGDYDQAIANYISTIEFDPLLASNINEDIANAYYYRGLHNSDHGNY- 163

Query: 176 KGARFYVTVGRNQLAAKEVEIGRY------YLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
              +  +   +  L         Y      Y K GEY  AI   +  +    +     EA
Sbjct: 164 ---QEAIIDLQQALQWHPYFAAAYSIRGNIYYKLGEYRQAIADHERAVQLDPN---LAEA 217

Query: 230 MARLVEAYVALALMDEA-REVVSLIQER 256
                 AY AL    +A  +    ++  
Sbjct: 218 YQNRGNAYYALGAYQKAIADYNRTLEIN 245


>gi|16332208|ref|NP_442936.1| hypothetical protein slr0751 [Synechocystis sp. PCC 6803]
 gi|2496796|sp|Q04737|Y751_SYNY3 RecName: Full=TPR repeat-containing protein slr0751
 gi|217095|dbj|BAA01277.1| ORF248 [Synechocystis sp. PCC 6803]
 gi|1653838|dbj|BAA18748.1| slr0751 [Synechocystis sp. PCC 6803]
          Length = 248

 Score = 42.4 bits (99), Expect = 0.060,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 38/105 (36%), Gaps = 10/105 (9%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            +  L+ ++Q+   A + F Q     P      K+    A   +  G+Y QA +     +
Sbjct: 134 NRGNLYSQQQDHHTAIQDFTQAITYDP-NRY--KAYYNRANSYFQLGQYAQAIADYNRVL 190

Query: 122 TQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
              P     DY    Y  G+++ Q  +     Q        Y++R
Sbjct: 191 VLRP-----DYINAIYNRGLAHFQAGQLDSSRQDLLFSAQAYLNR 230



 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 42/271 (15%), Positives = 83/271 (30%), Gaps = 42/271 (15%)

Query: 1   MSAVLGRAICIF---EAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVR-Y 56
           M   LG   C+    + +   L    + +  ++ V   +    +         V +    
Sbjct: 1   MKVNLGNCFCLSLSQKKFPLPLASLLVNVPLALMVALGMNLALERPGVTGEMVVLESPIA 60

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
              ++ + V   +  N+++A E F+      P +                 G   QA + 
Sbjct: 61  PEAIFAQGVKAGEAGNYAEAVELFSVVLNLSPDSPETH---YNRGLAWERLGNVDQAIAD 117

Query: 117 GEEYITQYPESKNVDYVYYL-----VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
               I            YY+      G  Y+Q        Q+     +Q  ++ +    N
Sbjct: 118 YGRSIAL--------DRYYIPPYINRGNLYSQ--------QQDHHTAIQDFTQAITYDPN 161

Query: 172 --SPYVKGARFYVTVGRNQLAAKEVEIGRYY---LKRGEYVAAIPRFQLVLANYS--DAE 224
               Y   A  Y      QL      I  Y    + R +Y+ AI  +   LA++     +
Sbjct: 162 RYKAYYNRANSYF-----QLGQYAQAIADYNRVLVLRPDYINAI--YNRGLAHFQAGQLD 214

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQE 255
            + + +    +AY+         E +  + E
Sbjct: 215 SSRQDLLFSAQAYLNRGDRRSYLEALDQMSE 245


>gi|282899497|ref|ZP_06307462.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
 gi|281195604|gb|EFA70536.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
          Length = 280

 Score = 42.4 bits (99), Expect = 0.061,   Method: Composition-based stats.
 Identities = 19/167 (11%), Positives = 43/167 (25%), Gaps = 23/167 (13%)

Query: 22  FALTIFFSIAVCFLVGWERQSS-------RDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
           F + +F  +     V   R           +             E Y +        NF 
Sbjct: 17  FTILVFTGLTGILCVSCNRNQDLLVTEIGVNPPKRPTRKTSGAGEFYLQGQNQHSRGNFQ 76

Query: 75  KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
            A   +++       +  A  +        +     ++A +   + +   P        Y
Sbjct: 77  AAIAAYSKSISLN--SDYAP-AFKARGLAYFDLNNKERAINDYNQSLQINPNDPET---Y 130

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              G + A +      DQ+     ++  +  +    N  Y +     
Sbjct: 131 NYRGNARASLG-----DQKG---AIEDYNEAIRLSPN--YAEAFNNR 167


>gi|256082563|ref|XP_002577524.1| heat shock protein 70 [Schistosoma mansoni]
 gi|238662846|emb|CAZ33762.1| heat shock protein 70 (hsp70)-interacting protein, putative
           [Schistosoma mansoni]
          Length = 270

 Score = 42.4 bits (99), Expect = 0.061,   Method: Composition-based stats.
 Identities = 18/137 (13%), Positives = 46/137 (33%), Gaps = 25/137 (18%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           +A+  + + + + A + F +  +  P +    AR++            K   A +  ++ 
Sbjct: 107 EAMAKMSDGDLTGAVDLFTEAIKLNPQSSLFHARRAS-----CFVRMKKPSHAIADCDKA 161

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           I+  P+S    Y +   G +  +MI          +   Q +   ++      Y   A  
Sbjct: 162 ISLNPDSAQ-PYKW--RGFAN-KMI-------GNWEAAYQDLQTSLKL----DYTDDANE 206

Query: 181 YVTVG---RNQLAAKEV 194
            +        ++    +
Sbjct: 207 AIKEIEPKHKRIFEHNM 223


>gi|253688744|ref|YP_003017934.1| Tetratricopeptide TPR_2 repeat protein [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|251755322|gb|ACT13398.1| Tetratricopeptide TPR_2 repeat protein [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 389

 Score = 42.4 bits (99), Expect = 0.061,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 59/180 (32%), Gaps = 28/180 (15%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              ++    + +A E FNQ   +  F   A +  L+  +   +   +  A    E+ +  
Sbjct: 114 GRDYMAAGLYDRAEESFNQLVDEEDFRRSALQ-QLLQIY--QATSDWPAAIDAAEKLVKM 170

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
             +   VD  ++   ++   M  D   D       L  +                     
Sbjct: 171 GKDQLRVDIAHFYCELALLAMGSD-DLD-----KALTLL-----------------KKGA 207

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
              NQ A   + +GR Y+ + +Y  A+   + VL    D E   E +  L E Y  L   
Sbjct: 208 AADNQCARASIMMGRIYMAQQDYSRAVEALRQVLD--QDKELVSETLPMLQECYQHLDKP 265


>gi|332257107|ref|XP_003277657.1| PREDICTED: serine/threonine-protein phosphatase 5 isoform 1
           [Nomascus leucogenys]
          Length = 499

 Score = 42.4 bits (99), Expect = 0.062,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 50/166 (30%), Gaps = 34/166 (20%)

Query: 40  RQSSRDVYLDSVTDV---RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VAR 94
           R    +   D        +   E+  +A  + K +++  A ++++Q     P        
Sbjct: 8   RTDCAEPPRDEPPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGN 67

Query: 95  KSLLMSAF----VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +S    A+       Y+ G   +A  L ++YI            YY    S   +     
Sbjct: 68  RS---LAYLRTECYGYALGDATRAIELDKKYIK----------GYYRRAASNMAL----- 109

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
                 +  L+    +V+   +      A+         +  K  E
Sbjct: 110 ---GKFRAALRDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 149


>gi|324513857|gb|ADY45676.1| Tetratricopeptide repeat protein 1 [Ascaris suum]
          Length = 299

 Score = 42.4 bits (99), Expect = 0.062,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 37/120 (30%), Gaps = 13/120 (10%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS--LLMSAFVQYSAGKYQQAASLGEE 119
            +      E ++ +A E + +     P    + ++  L   A        +  A     E
Sbjct: 134 NEGNRKFGEGSWQEAIELYTKALERCPLVYTSERAVYLSNRAACHIKLSDWDAAIKDCTE 193

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP-YVKGA 178
            I     + N D         YAQ   +           L     ++++Y +   YV+ A
Sbjct: 194 AIKL--GAPN-DKPLERRAHCYAQTEENYD-------NALHDYDELIKKYPDKKVYVEKA 243


>gi|282895991|ref|ZP_06304022.1| TPR repeat protein [Raphidiopsis brookii D9]
 gi|281199101|gb|EFA73971.1| TPR repeat protein [Raphidiopsis brookii D9]
          Length = 805

 Score = 42.4 bits (99), Expect = 0.062,   Method: Composition-based stats.
 Identities = 10/67 (14%), Positives = 22/67 (32%), Gaps = 5/67 (7%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           ++A   L +  +  A   + + +   P          L   F+     +Y++A     + 
Sbjct: 581 QEAEELLSQNRYEDALSIYEKITSIQPDHGEY----WLKRGFILNKLKRYKEAIGAYNQV 636

Query: 121 ITQYPES 127
           I   P  
Sbjct: 637 IRINPAH 643



 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 51/136 (37%), Gaps = 26/136 (19%)

Query: 49  DSVTDVRYQREVY--EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQ 104
           +  T+++ +  V    + +  ++ +N+ +A   F++     P  F    ++      +  
Sbjct: 668 NKATEIKPEESVAWLNRGLSLVELENYEEAISSFDKALEIQPSSFKIWDKR-----GYTL 722

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
              G+ ++A +   + +   P     DY    Y     YA         Q+  +L L  +
Sbjct: 723 VRLGRDEEAITNFNKALELNP-----DYGSALYHKSACYAL--------QKNVELALVNL 769

Query: 163 SRIVERYTNSPYVKGA 178
            + ++   +  Y + A
Sbjct: 770 QQAIKHKPS--YREDA 783


>gi|189053397|dbj|BAG35563.1| unnamed protein product [Homo sapiens]
          Length = 499

 Score = 42.4 bits (99), Expect = 0.062,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 49/156 (31%), Gaps = 31/156 (19%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF-- 102
              +   ++   E+  +A  + K +++  A ++++Q     P        +S    A+  
Sbjct: 18  EPPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS---LAYLC 74

Query: 103 --VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
                Y+ G   +A  L ++YI            YY    S   +           +  L
Sbjct: 75  TECYGYALGDATRAIELDKKYIK----------GYYRRAASNMAL--------GKFRAAL 116

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           +    +V+   +      A+         +  K  E
Sbjct: 117 RDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 149


>gi|169832341|ref|YP_001718323.1| TPR repeat-containing protein [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169639185|gb|ACA60691.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 191

 Score = 42.4 bits (99), Expect = 0.062,   Method: Composition-based stats.
 Identities = 14/95 (14%), Positives = 33/95 (34%), Gaps = 13/95 (13%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           ++ ++ + F +           ++  L  A +    G+++QA    E  +   P      
Sbjct: 86  DYERSIQLFEEVLAL---EADNQRVRLDLAEMYLQLGEHEQAIGQLEALLEINPGHHR-- 140

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
              YL G++      D P         ++ + R +
Sbjct: 141 -ALYLYGIALGFGREDYP-------EAIRALERFL 167



 Score = 35.9 bits (82), Expect = 5.7,   Method: Composition-based stats.
 Identities = 8/61 (13%), Positives = 19/61 (31%), Gaps = 4/61 (6%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ-YSAGKYQQAASLGEEYIT 122
           A ++L+     +A           P      ++L +      +    Y +A    E ++ 
Sbjct: 112 AEMYLQLGEHEQAIGQLEALLEINPGHH---RALYLYGIALGFGREDYPEAIRALERFLA 168

Query: 123 Q 123
            
Sbjct: 169 L 169


>gi|88799631|ref|ZP_01115207.1| hypothetical protein MED297_04577 [Reinekea sp. MED297]
 gi|88777716|gb|EAR08915.1| hypothetical protein MED297_04577 [Reinekea sp. MED297]
          Length = 177

 Score = 42.4 bits (99), Expect = 0.062,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 56/168 (33%), Gaps = 22/168 (13%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQR-EVYEKAVLFLKEQNFSKAYEYFNQC 83
           T+F  +             ++++   +T    +  E  ++ V  + +  ++ A    N  
Sbjct: 24  TLFVELGEATTAAQAEPIEQEIWSQWMTGPNEEATEALKRVVTNMNQGEWTLAMVRLNDL 83

Query: 84  SRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
             + P +     +++ L      Y  G   ++ +  E+ + Q P        +  +G+  
Sbjct: 84  INENPTYTEAWNKRATL-----HYMLGNADESIADIEQTLKQEPRHFG---AWSGLGLIL 135

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
            +            +  L     +++ Y  SP    +R  V     QL
Sbjct: 136 ERR--------GQLRAALTAHREVLKLYPTSP---SSRQRVESLEAQL 172


>gi|113476172|ref|YP_722233.1| hypothetical protein Tery_2560 [Trichodesmium erythraeum IMS101]
 gi|110167220|gb|ABG51760.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101]
          Length = 309

 Score = 42.4 bits (99), Expect = 0.062,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 52/158 (32%), Gaps = 40/158 (25%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           LY+F  +I   + V FL      S       +   +   ++V+ + +   + +N+ +A E
Sbjct: 4   LYRFLFSIIIVVTVLFL----SFSPPMKIATANLKIGNAKKVFTEGITNSENKNYEQAVE 59

Query: 79  YF-NQCSRDFPF-AGVARK-----------------------------SLLMSAFVQYSA 107
            F       F F +  + +                             + L         
Sbjct: 60  NFTKAIELKFKFASAYSNRCLVYLQWGKYEEAIADCTEAIKINPKNIEANLNLGLAYDKI 119

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-VYYLVGMSYAQM 144
           G YQQA +   + +      ++ D+   Y  G++  ++
Sbjct: 120 GNYQQAIAEYNQVL----NHQHNDFRALYNRGLANFEL 153


>gi|332828930|gb|EGK01613.1| hypothetical protein HMPREF9455_02145 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 1209

 Score = 42.4 bits (99), Expect = 0.062,   Method: Composition-based stats.
 Identities = 19/164 (11%), Positives = 54/164 (32%), Gaps = 20/164 (12%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
                  A       I++YP + N++ +YY + + Y Q+                Y +++
Sbjct: 596 KLEDLPLAIETFNADISRYPATPNLEEIYYQLLLIYMQLGDQDML--------AVYRNKL 647

Query: 166 VERYTNSPYVKGARF--------YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
           +  +    Y              ++ + ++ L   E        +R +       +Q + 
Sbjct: 648 LTEFPQGQYAIPLSEPDFEWNFRHMPLLQDSL-YNEAYAA---YQRADVQIVRNNYQAMK 703

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           A Y   +   +       +Y     +    + ++ + +++P+  
Sbjct: 704 AKYPFTDMMPKFAFLNALSYAQTRDVKALGDNLAEVVQKFPKAD 747



 Score = 35.9 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 54/161 (33%), Gaps = 29/161 (18%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA----------------- 93
                 +   Y+  +++++  +      Y N+   +FP    A                 
Sbjct: 615 PATPNLEEIYYQLLLIYMQLGDQDMLAVYRNKLLTEFPQGQYAIPLSEPDFEWNFRHMPL 674

Query: 94  -RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
            + SL   A+  Y     Q   +  +    +YP +  +    +L  +SYAQ       D 
Sbjct: 675 LQDSLYNEAYAAYQRADVQIVRNNYQAMKAKYPFTDMMPKFAFLNALSYAQ-----TRDV 729

Query: 153 RATKLMLQYMSRIVERYTN---SPYVKGARFYVTVGRNQLA 190
           +A       ++ +V+++     +P        +  GR  L+
Sbjct: 730 KALG---DNLAEVVQKFPKADVTPLATEILERIKEGRIILS 767


>gi|325111315|ref|YP_004272383.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces
           brasiliensis DSM 5305]
 gi|324971583|gb|ADY62361.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces
           brasiliensis DSM 5305]
          Length = 448

 Score = 42.4 bits (99), Expect = 0.062,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 77/235 (32%), Gaps = 45/235 (19%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKS 96
            Q+  D  L    D  Y   +  +   +L++ N+SKA E F         +       KS
Sbjct: 177 GQAINDFNLAIRYDKEYIDAMNNRGYAYLEQGNYSKAIENFTDAIALDETY------VKS 230

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPE------SKNVDYVYYLVGMSYAQMIRDVPY 150
                F     G  + A     + I   P        +   +      ++     + V  
Sbjct: 231 YNNRGFTHMKVGDNEAAVKDFSKAIELSPNVVKHYLHRRDAW------LAMGNQEKAVA- 283

Query: 151 DQRATKLMLQYM--SRIVERYTNS-----PYVK--GARFYVTVGRNQLAAKE-----VEI 196
           DQ+  +   Q +  SR ++R   +        K   A          L+  E     +  
Sbjct: 284 DQKQAQWTQQLLLISRRMQREPKNAELLVERAKHFVAAERFEEAFEDLSQAEKMDQDLAA 343

Query: 197 -----GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
                   Y  R EY AAI      L    DA+H   A++   +AY+A   +DEA
Sbjct: 344 VHTCRAEIYYGREEYKAAIESCTKAL----DADHDFSALSLRGDAYMATGKLDEA 394


>gi|291566092|dbj|BAI88364.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 1651

 Score = 42.4 bits (99), Expect = 0.062,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 68/213 (31%), Gaps = 39/213 (18%)

Query: 64  AVLFLKEQNFSKAYEYFNQC-----SRDFPFAGVARKSLLMSAFVQYSAGKY-------Q 111
           A L+ + ++F KA     +                    +   +  +    Y       Q
Sbjct: 264 ANLYQQTEDFEKAIAVLEKRLAIVRESQDKSGEYGLLYQIGGVY-YHQLKDYNGAFDYYQ 322

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGM------------SYAQ-MIRDVPYD---QRAT 155
            A  + + +  + P S+     YY++G+            SY +  I     D   Q+  
Sbjct: 323 SALEVAQGFTEKQPLSE--ANAYYMLGLVSDSLNKSEDGISYFEKAIGYYEQDDSQQQWF 380

Query: 156 KLMLQYMSRIVERYTNSPY-VKGARFYVTVG---RNQLAAKEV--EIGRYYLKRGEYVAA 209
              L Y+ ++ E+  +S   +  A   + +     ++     +  +IG  Y ++  Y  A
Sbjct: 381 VKSLDYIEKLSEKIGDSEKLIAVAEKRLILLGEGEDKSGKYSLVYKIGGLYYQQKNYSRA 440

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
              +Q  L         E        AY  L L
Sbjct: 441 FDYYQSALEVAQG--LTERQPLYEANAYYMLGL 471


>gi|194211573|ref|XP_001490817.2| PREDICTED: similar to FK506-binding protein 4 (Peptidyl-prolyl
           cis-trans isomerase) (PPIase) (Rotamase) (p59 protein)
           (HSP-binding immunophilin) (HBI) (FKBP52 protein) (52
           kDa FK506-binding protein) (FKBP59) [Equus caballus]
          Length = 560

 Score = 42.4 bits (99), Expect = 0.062,   Method: Composition-based stats.
 Identities = 17/144 (11%), Positives = 44/144 (30%), Gaps = 26/144 (18%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPF-AGVA----RKSL-------LMSAFVQYSAGK 109
           E+  ++ KE  + +A   + +      + +  +    +K+        L  A        
Sbjct: 376 ERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSDEDVQKAQALRLASHLNLAMCHLKLQA 435

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           +  A     + +     ++      +  G ++   + D                ++++ Y
Sbjct: 436 FSAAIESCNKALELDSNNEKG---LFRRGEAHL-AVNDFDL-------ARADFQKVLQLY 484

Query: 170 TNSPYVKGARFYV--TVGRNQLAA 191
             S     A+  +     R QLA 
Sbjct: 485 P-SNKAAKAQLAICQQRIRKQLAR 507



 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 32/80 (40%), Gaps = 2/80 (2%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKAYEYF 80
             L    ++A+C L      ++ +    ++  D   ++ ++ +    L   +F  A   F
Sbjct: 418 LRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFDLARADF 477

Query: 81  NQCSRDFPFAGVARKSLLMS 100
            +  + +P +  A K+ L  
Sbjct: 478 QKVLQLYP-SNKAAKAQLAI 496


>gi|332840993|ref|XP_001147729.2| PREDICTED: intraflagellar transport protein 88 homolog isoform 4
           [Pan troglodytes]
          Length = 833

 Score = 42.4 bits (99), Expect = 0.063,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 85/303 (28%), Gaps = 64/303 (21%)

Query: 2   SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60
                +A+ I +    +  +       +++  + +G +  Q+S    +   +D      +
Sbjct: 437 QKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 496

Query: 61  YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
             K        ++ KA E++      D   +     +L           +  +A      
Sbjct: 497 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 549

Query: 120 YITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKL--------- 157
           ++  +   +N   V Y +   Y              Q++  +P D +             
Sbjct: 550 FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREG 609

Query: 158 ----MLQYMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEI 196
                 QY       +               ++ + + A  Y     + +      ++ +
Sbjct: 610 DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMV 669

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEAREVVSL 252
              + + G         Q  L  Y D         E +  LV     L L D A+E    
Sbjct: 670 ASCFRRSGN-------SQKALDTYKDTHRKFPENVECLRFLVRLCTDLGLKD-AQEYARK 721

Query: 253 IQE 255
           ++ 
Sbjct: 722 LKR 724



 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 66/222 (29%), Gaps = 67/222 (30%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117
            KAV +L+++++++A E      +    + V   +    + + Y    + QA+S      
Sbjct: 429 NKAVTYLRQKDYNQAVEILKVLEKKD--SRVKSAAATNLSALYYMGKDFAQASSYADIAV 486

Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147
             + Y    P    +K      N DY                     Y +G++Y ++ R 
Sbjct: 487 NSDRY---NPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNR- 542

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
                      L    ++     NS                 A    +I   Y       
Sbjct: 543 -------LDEALDCFLKLHAILRNS-----------------AEVLYQIANIYELMENPS 578

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
            AI     V++           +++L E Y       +A + 
Sbjct: 579 QAIEWLMQVVSVIPTDPQV---LSKLGELYDREGDKSQAFQY 617


>gi|297738576|emb|CBI27821.3| unnamed protein product [Vitis vinifera]
          Length = 1091

 Score = 42.4 bits (99), Expect = 0.063,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 77/249 (30%), Gaps = 76/249 (30%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           +A +      +S + + + +  + +P    A +  +      Y  G++++A    +  + 
Sbjct: 168 QACVEFNRGRYSDSLDLYKRALQVYPDCPAAVRVGIGL--CCYKLGQFEKARKAFQRVLQ 225

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
             PE+        LV +    +      D    +  ++ M R  E Y    Y   A  Y+
Sbjct: 226 LDPENVEA-----LVALGIMDLH---TNDASGIRKGMEKMQRAFEIYP---YCAMALNYL 274

Query: 183 T---------VGRNQLAAKEVEI---------------------------GRYYL----- 201
                         QL    + +                           G YY+     
Sbjct: 275 ANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE 334

Query: 202 -------------------KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
                              K G++ +++  F+ VL  Y +     EA+  L   YV L  
Sbjct: 335 SNKPHDFVLPYYGLGQVQLKLGDFRSSLSNFEKVLEVYPE---NCEALKALGHIYVQLGQ 391

Query: 243 MDEAREVVS 251
            ++A+E + 
Sbjct: 392 TEKAQEYLR 400


>gi|260554754|ref|ZP_05826975.1| conserved hypothetical protein [Acinetobacter baumannii ATCC 19606]
 gi|260411296|gb|EEX04593.1| conserved hypothetical protein [Acinetobacter baumannii ATCC 19606]
          Length = 294

 Score = 42.4 bits (99), Expect = 0.063,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 41/120 (34%), Gaps = 17/120 (14%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG--EYVAA 209
           Q   K  +  M   ++ + NS Y   A F++                ++L      Y  A
Sbjct: 189 QGGAKKAIAPMQNFIKNHPNSIYTGNAYFWL--------------AEFHLATDPVNYNEA 234

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVE-AYVALALMDEAREVVSLIQERYPQGYWARYVET 268
              + +V   Y ++  A  A+ +L   A         A +  + +  +Y +   A++   
Sbjct: 235 KKNYNVVANQYPNSSKAPRALYQLYSIAKDVDKNTVSANQYKNKLLSQYSKSEEAKFFNK 294



 Score = 40.1 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 42/122 (34%), Gaps = 9/122 (7%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG--KYQQAA 114
           ++  Y  A+   K+    KA        ++ P +     +    A    +     Y +A 
Sbjct: 176 EKAAYTVALDAYKQGGAKKAIAPMQNFIKNHPNSIYTGNAYFWLAEFHLATDPVNYNEAK 235

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
                   QYP S       Y +      + +DV    + T    QY ++++ +Y+ S  
Sbjct: 236 KNYNVVANQYPNSSKAPRALYQL----YSIAKDVD---KNTVSANQYKNKLLSQYSKSEE 288

Query: 175 VK 176
            K
Sbjct: 289 AK 290



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 28/79 (35%), Gaps = 8/79 (10%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR-DVPYDQRATKLMLQYMS 163
           Y  G  ++A +  + +I  +P S          G +Y  +    +  D        +  +
Sbjct: 187 YKQGGAKKAIAPMQNFIKNHPNSIYT-------GNAYFWLAEFHLATDPVNYNEAKKNYN 239

Query: 164 RIVERYTNSPYVKGARFYV 182
            +  +Y NS     A + +
Sbjct: 240 VVANQYPNSSKAPRALYQL 258


>gi|322833962|ref|YP_004213989.1| peptidase M48 Ste24p [Rahnella sp. Y9602]
 gi|321169163|gb|ADW74862.1| peptidase M48 Ste24p [Rahnella sp. Y9602]
          Length = 512

 Score = 42.4 bits (99), Expect = 0.064,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 35/132 (26%), Gaps = 34/132 (25%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREV---YEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
           +  + G E     D YL  +++   + ++   Y  A+ F K + + +A           P
Sbjct: 305 ILGMYGSESFPLSDDYLLKLSNGNIREQLAAKYGHALQFYKAKKYDQARTILEPLLAQNP 364

Query: 89  FAGV--------------ARKS-----------------LLMSAFVQYSAGKYQQAASLG 117
                             A ++                  L  A       K   A  + 
Sbjct: 365 GNEWLLDLATDNDIDSKRAPQAIARLEQAGAASSANAVLQLNLANAYLEGAKPANAMKIL 424

Query: 118 EEYITQYPESKN 129
             Y   YP   N
Sbjct: 425 NRYTFNYPGDPN 436


>gi|147781154|emb|CAN67377.1| hypothetical protein VITISV_017914 [Vitis vinifera]
          Length = 788

 Score = 42.4 bits (99), Expect = 0.064,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 77/249 (30%), Gaps = 76/249 (30%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           +A +      +S + + + +  + +P    A +  +      Y  G++++A    +  + 
Sbjct: 168 QACVEFNRGRYSDSLDLYKRALQVYPDCPAAVRVGIGL--CCYKLGQFEKARKAFQRVLQ 225

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
             PE+        LV +    +      D    +  ++ M R  E Y    Y   A  Y+
Sbjct: 226 LDPENVEA-----LVALGIMDLH---TNDASGIRKGMEKMQRAFEIYP---YCAMALNYL 274

Query: 183 T---------VGRNQLAAKEVEI---------------------------GRYYL----- 201
                         QL    + +                           G YY+     
Sbjct: 275 ANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE 334

Query: 202 -------------------KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
                              K G++ +++  F+ VL  Y +     EA+  L   YV L  
Sbjct: 335 SNKPHDFVLPYYGLGQVQLKLGDFRSSLSNFEKVLEVYPE---NCEALKALGHIYVQLGQ 391

Query: 243 MDEAREVVS 251
            ++A+E + 
Sbjct: 392 TEKAQEYLR 400


>gi|145553124|ref|XP_001462237.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124430075|emb|CAK94864.1| unnamed protein product [Paramecium tetraurelia]
          Length = 2950

 Score = 42.4 bits (99), Expect = 0.064,   Method: Composition-based stats.
 Identities = 26/210 (12%), Positives = 70/210 (33%), Gaps = 43/210 (20%)

Query: 70   EQNFSKAYEYFNQCSRDFPFAGVARKSLLM--SAFVQYSAGKYQQAASLGEEYITQYPES 127
            ++ F +A + + +       + + +   L    A   Y    +++A    ++ ++  P+ 
Sbjct: 2749 QEQFEQAIQIYEEI------SHLDQNEELEYNMANCYYMKNDFEEAVLHYQKALSINPD- 2801

Query: 128  KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP-----YV------- 175
              ++  YY +G +Y  M +         +  L+   R+V+           Y        
Sbjct: 2802 -KIE-CYYNLGNTYCIMEK--------FEEALECFERVVKDDPKHSAAFYNYANTFFVLQ 2851

Query: 176  --KGARFYVTVGRNQLAAK---EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
              + A  Y                 + + Y+++G+  AA       +          + +
Sbjct: 2852 DYENAAKYFEKAVELQPENVDWRNYVAQLYIEKGDLNAAKRHLDESMRLQPR---NPDTL 2908

Query: 231  ARLVEAYVALA----LMDEAREVVSLIQER 256
             R    Y  +      + +A++ ++L +  
Sbjct: 2909 VRYANYYYQIGNYKEAIQKAKQTLALDEAN 2938



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 32/92 (34%), Gaps = 11/92 (11%)

Query: 53   DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK--SLLMSAFVQYSAGKY 110
            D ++    Y  A  F   Q++  A +YF +     P     R   + L         G  
Sbjct: 2833 DPKHSAAFYNYANTFFVLQDYENAAKYFEKAVELQPENVDWRNYVAQL-----YIEKGDL 2887

Query: 111  QQAASLGEEYITQYPESKN--VDYV--YYLVG 138
              A    +E +   P + +  V Y   YY +G
Sbjct: 2888 NAAKRHLDESMRLQPRNPDTLVRYANYYYQIG 2919


>gi|62898005|dbj|BAD96942.1| protein phosphatase 5, catalytic subunit variant [Homo sapiens]
          Length = 499

 Score = 42.4 bits (99), Expect = 0.064,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 49/156 (31%), Gaps = 31/156 (19%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF-- 102
              +   +R   E+  +A  + K +++  A ++++Q     P        +S    A+  
Sbjct: 18  EPPADGALRRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS---LAYLR 74

Query: 103 --VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
                Y+ G   +A  L ++YI            YY    S   +           +  L
Sbjct: 75  TECYGYALGDATRAIELDKKYIK----------GYYRRAASNMAL--------GKFRAAL 116

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           +    +V+   +      A+         +  K  E
Sbjct: 117 RDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 149


>gi|160874902|ref|YP_001554218.1| tol-pal system protein YbgF [Shewanella baltica OS195]
 gi|160860424|gb|ABX48958.1| tol-pal system protein YbgF [Shewanella baltica OS195]
 gi|315267139|gb|ADT93992.1| tol-pal system protein YbgF [Shewanella baltica OS678]
          Length = 249

 Score = 42.4 bits (99), Expect = 0.064,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 40/124 (32%), Gaps = 22/124 (17%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
              KY  A      +I QYP+S       Y +G                     Q    +
Sbjct: 139 KERKYDDAIPAFRAFIKQYPDSVYAANANYWLGQLLFNKSEFA--------EAKQAFKTV 190

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           V+R+++S     +   + +                 K G+   A   +Q V+ +Y+++  
Sbjct: 191 VDRFSDSNKRGDSLVKLGMIAE--------------KTGDKAGATQYYQQVVKDYANSAA 236

Query: 226 AEEA 229
           A  A
Sbjct: 237 ARIA 240



 Score = 38.9 bits (90), Expect = 0.71,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 47/131 (35%), Gaps = 17/131 (12%)

Query: 61  YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL--- 116
           YE AV   LKE+ +  A   F    + +P +  A  +      + ++  ++ +A      
Sbjct: 130 YESAVNLVLKERKYDDAIPAFRAFIKQYPDSVYAANANYWLGQLLFNKSEFAEAKQAFKT 189

Query: 117 -GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
             + +        +         +    MI +   D+       QY  ++V+ Y NS   
Sbjct: 190 VVDRFSDSNKRGDS---------LVKLGMIAEKTGDKAG---ATQYYQQVVKDYANSAAA 237

Query: 176 KGARFYVTVGR 186
           + A+  +   +
Sbjct: 238 RIAQQQLAAIK 248


>gi|1122931|gb|AAB60384.1| serine-threonine phosphatase [Homo sapiens]
          Length = 491

 Score = 42.4 bits (99), Expect = 0.064,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 49/156 (31%), Gaps = 31/156 (19%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF-- 102
              +   ++   E+  +A  + K +++  A ++++Q     P        +S    A+  
Sbjct: 10  EPPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS---LAYLR 66

Query: 103 --VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
                Y+ G   +A  L ++YI            YY    S   +           +  L
Sbjct: 67  TECYGYALGDATRAIELDKKYIK----------GYYRRAASNMAL--------GKFRAAL 108

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           +    +V+   +      A+         +  K  E
Sbjct: 109 RDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 141


>gi|81299834|ref|YP_400042.1| TPR repeat-containing protein [Synechococcus elongatus PCC 7942]
 gi|81168715|gb|ABB57055.1| TPR repeat [Synechococcus elongatus PCC 7942]
          Length = 156

 Score = 42.4 bits (99), Expect = 0.064,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 43/131 (32%), Gaps = 21/131 (16%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++A + +     ++A +  +      P FA    R+++L      Y  G+Y ++    + 
Sbjct: 45  QRAEVLMTAGEMAEAEQLLSDLINQLPDFAEAWNRRAVL-----HYLQGRYSESLEDCDR 99

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            I   P         +  G+S A +           +  +      +E      Y    +
Sbjct: 100 VIDLNPIHFG---ALHGKGLSLAAL--------GQYREAITAFRAALEIQP---YALINQ 145

Query: 180 FYVTVGRNQLA 190
             +     +L+
Sbjct: 146 RLILECTARLS 156


>gi|325110736|ref|YP_004271804.1| hypothetical protein Plabr_4209 [Planctomyces brasiliensis DSM
           5305]
 gi|324971004|gb|ADY61782.1| hypothetical protein Plabr_4209 [Planctomyces brasiliensis DSM
           5305]
          Length = 526

 Score = 42.4 bits (99), Expect = 0.065,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
            +  +             QLA      G+ + KRG++ +AI   Q+V+ ++ + +     
Sbjct: 431 PDLDHALELANQAVEVVPQLAEFRDTRGQIHAKRGDWKSAILDLQIVVRHFPNRKQV--- 487

Query: 230 MARLVEAYVALALMDEAREVVS 251
           +  L +AY  L   D A     
Sbjct: 488 LELLAKAYEELGDNDVAAAYRR 509


>gi|126173977|ref|YP_001050126.1| TPR repeat-containing protein [Shewanella baltica OS155]
 gi|153000269|ref|YP_001365950.1| Tol-Pal system YbgF [Shewanella baltica OS185]
 gi|217973702|ref|YP_002358453.1| tol-pal system protein YbgF [Shewanella baltica OS223]
 gi|125997182|gb|ABN61257.1| Tetratricopeptide TPR_2 repeat protein [Shewanella baltica OS155]
 gi|151364887|gb|ABS07887.1| Tol-Pal system YbgF [Shewanella baltica OS185]
 gi|217498837|gb|ACK47030.1| tol-pal system protein YbgF [Shewanella baltica OS223]
          Length = 249

 Score = 42.4 bits (99), Expect = 0.065,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 40/124 (32%), Gaps = 22/124 (17%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
              KY  A      +I QYP+S       Y +G                     Q    +
Sbjct: 139 KERKYDDAIPAFRAFIKQYPDSVYAANANYWLGQLLFNKSEFA--------EAKQAFKTV 190

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           V+R+++S     +   + +                 K G+   A   +Q V+ +Y+++  
Sbjct: 191 VDRFSDSNKRGDSLVKLGMIAE--------------KTGDKAGATQYYQQVVKDYANSAA 236

Query: 226 AEEA 229
           A  A
Sbjct: 237 ARIA 240



 Score = 38.9 bits (90), Expect = 0.76,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 47/131 (35%), Gaps = 17/131 (12%)

Query: 61  YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL--- 116
           YE AV   LKE+ +  A   F    + +P +  A  +      + ++  ++ +A      
Sbjct: 130 YESAVNLVLKERKYDDAIPAFRAFIKQYPDSVYAANANYWLGQLLFNKSEFAEAKQAFKT 189

Query: 117 -GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
             + +        +         +    MI +   D+       QY  ++V+ Y NS   
Sbjct: 190 VVDRFSDSNKRGDS---------LVKLGMIAEKTGDKAG---ATQYYQQVVKDYANSAAA 237

Query: 176 KGARFYVTVGR 186
           + A+  +   +
Sbjct: 238 RIAQQQLAAIK 248


>gi|119485353|ref|ZP_01619681.1| TPR repeat protein [Lyngbya sp. PCC 8106]
 gi|119457109|gb|EAW38235.1| TPR repeat protein [Lyngbya sp. PCC 8106]
          Length = 310

 Score = 42.4 bits (99), Expect = 0.065,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 61/176 (34%), Gaps = 42/176 (23%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRY---------QREVYEKAVLFLKE---- 70
           +    SIAV F +G+   +     L+S +             Q++ Y +A+  L +    
Sbjct: 7   VLCSLSIAVIFWIGYSVSAFAQTPLNSPSKAENYLSQAIEQIQQQHYSQALQALNQAINL 66

Query: 71  ------------------QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
                              N+S+A +     ++  P +  +  + L      Y +G +  
Sbjct: 67  DNTLVEAYRDRCLISVQLGNYSQAIQDCLYATQLQPHSN-SNNTYLNLGIAYYRSGDFTH 125

Query: 113 AASLGEEYITQYPESKNVDYV---YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
           A +  +  I      ++       YY  G++Y+++ +D           L Y + +
Sbjct: 126 AIAAYDHLI------EHQADAVLGYYNRGLAYSEL-QDYTNAIADYNQALNYTASL 174


>gi|114648901|ref|XP_001147935.1| PREDICTED: intraflagellar transport 88 homolog isoform 7 [Pan
           troglodytes]
          Length = 796

 Score = 42.4 bits (99), Expect = 0.065,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 85/303 (28%), Gaps = 64/303 (21%)

Query: 2   SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60
                +A+ I +    +  +       +++  + +G +  Q+S    +   +D      +
Sbjct: 437 QKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 496

Query: 61  YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
             K        ++ KA E++      D   +     +L           +  +A      
Sbjct: 497 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 549

Query: 120 YITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKL--------- 157
           ++  +   +N   V Y +   Y              Q++  +P D +             
Sbjct: 550 FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREG 609

Query: 158 ----MLQYMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEI 196
                 QY       +               ++ + + A  Y     + +      ++ +
Sbjct: 610 DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMV 669

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEAREVVSL 252
              + + G         Q  L  Y D         E +  LV     L L D A+E    
Sbjct: 670 ASCFRRSGN-------SQKALDTYKDTHRKFPENVECLRFLVRLCTDLGLKD-AQEYARK 721

Query: 253 IQE 255
           ++ 
Sbjct: 722 LKR 724



 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 66/222 (29%), Gaps = 67/222 (30%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117
            KAV +L+++++++A E      +    + V   +    + + Y    + QA+S      
Sbjct: 429 NKAVTYLRQKDYNQAVEILKVLEKKD--SRVKSAAATNLSALYYMGKDFAQASSYADIAV 486

Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147
             + Y    P    +K      N DY                     Y +G++Y ++ R 
Sbjct: 487 NSDRY---NPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNR- 542

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
                      L    ++     NS                 A    +I   Y       
Sbjct: 543 -------LDEALDCFLKLHAILRNS-----------------AEVLYQIANIYELMENPS 578

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
            AI     V++           +++L E Y       +A + 
Sbjct: 579 QAIEWLMQVVSVIPTDPQV---LSKLGELYDREGDKSQAFQY 617


>gi|94971629|ref|YP_593677.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94553679|gb|ABF43603.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
           Ellin345]
          Length = 722

 Score = 42.4 bits (99), Expect = 0.065,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 75/217 (34%), Gaps = 37/217 (17%)

Query: 60  VYEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLM--SAFVQYSAGKYQQAASL 116
           +YE+ V       + +KA E +       P +       L    A + +  G+ + A   
Sbjct: 82  MYEEMVATYGRAEYANKAIEEYRAAITADPSSDY-----LNAGLADLYWRTGRIRDAVLE 136

Query: 117 GEEYITQYPESKNVDYVY---YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
            +E + + P++ +   +    YL  +   Q   +   D +  +L ++    IV+    S 
Sbjct: 137 AQEILKRDPKNVDAHRLLGRIYLRSLGDMQSGNNQSRDMQ--RLAIEQYEEIVKLDPTS- 193

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
                               + +GR Y    +   A   F+  +    D+   EEA+  L
Sbjct: 194 ----------------VEDHLLLGRLYSYSNDLTKAEKEFKTAVQIQPDS---EEAVTML 234

Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
              Y       +A+EV+S      P    +  + + +
Sbjct: 235 AYLYTQEGDTKKAQEVLS----NIPDDDRSAKLYSTL 267


>gi|255034847|ref|YP_003085468.1| Tetratricopeptide TPR_2 repeat-containing protein [Dyadobacter
           fermentans DSM 18053]
 gi|254947603|gb|ACT92303.1| Tetratricopeptide TPR_2 repeat protein [Dyadobacter fermentans DSM
           18053]
          Length = 352

 Score = 42.4 bits (99), Expect = 0.065,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 50/132 (37%), Gaps = 14/132 (10%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
           +G   ++  D       D    + +    ++  +   + +A  YF+Q     P    +  
Sbjct: 186 MGSYTEARLDFETAVALDPAQPQALNNLGLIASRNHQWQQAIAYFDQVLSRDPSEPYSLN 245

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
                 +    +GK ++A  L E  + + PE+    Y    +GM Y Q        + +T
Sbjct: 246 ---NKGYALLQSGKPEEAKVLIERSLEKLPEN---GYALRNLGM-YYQQ-------KGST 291

Query: 156 KLMLQYMSRIVE 167
           +  L+  ++ ++
Sbjct: 292 QEALKSFNKAID 303


>gi|124516514|gb|EAY58022.1| protein of unknown function [Leptospirillum rubarum]
 gi|206603409|gb|EDZ39889.1| Protein of unknown function [Leptospirillum sp. Group II '5-way
           CG']
          Length = 231

 Score = 42.4 bits (99), Expect = 0.065,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 70/226 (30%), Gaps = 53/226 (23%)

Query: 50  SVTDVRYQREVYEKA-VLFLKEQNFSKAY----EYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           S +        YE   +  L   +  KA     +             + ++  +  A   
Sbjct: 17  SPSSPLAGEAFYELGRMDDLYGNDPQKAAGHYMKSLENLKD----GSLRQRVSIDLATDL 72

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP---YDQRA------- 154
              GK  +A ++                   L G+  + ++       +D  A       
Sbjct: 73  EHLGKPDEALAI-------------------LRGLDGSNLLSTFKPRVWDLTARILEHEG 113

Query: 155 -TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
             +  L Y  ++ +R  +S   + A+F + +    LA  ++       +R      + RF
Sbjct: 114 HYREALGYYKKVSDREPDSFRGQKAQFKIGLL-ESLA-SDLPSA----QRD-----LGRF 162

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
              +  Y D+     A   L   +  L    +A  ++  I+  YP 
Sbjct: 163 ---VKRYPDSPFTPVARFNLALTWDRLGDHQKALSILESIKGSYPN 205


>gi|328789632|ref|XP_396581.4| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Apis
           mellifera]
          Length = 1255

 Score = 42.4 bits (99), Expect = 0.066,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 51/141 (36%), Gaps = 24/141 (17%)

Query: 133 VYYLVGM------SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------R 179
            Y L+ +      +  Q  +D   ++R     L    +++     + +           +
Sbjct: 600 AYSLIALGNIWLQTLHQSGKDKDREKRHQDRALAMYKQVLRNDPKNIWAANGIGAVLAHK 659

Query: 180 FYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
             V   R+  A  +E         + I   Y+++ ++V+AI  ++  L  +    H  E 
Sbjct: 660 GCVNEARDIFAQVREATAEFCDVWLNIAHIYVEQKQFVSAIQMYENCLRKFYKYHHV-EV 718

Query: 230 MARLVEAYVALALMDEAREVV 250
           +  L  AY     + EA+  +
Sbjct: 719 LQYLGRAYFKAGKLKEAKLTL 739


>gi|282879640|ref|ZP_06288371.1| tetratricopeptide repeat protein [Prevotella timonensis CRIS 5C-B1]
 gi|281306588|gb|EFA98617.1| tetratricopeptide repeat protein [Prevotella timonensis CRIS 5C-B1]
          Length = 875

 Score = 42.4 bits (99), Expect = 0.066,   Method: Composition-based stats.
 Identities = 9/69 (13%), Positives = 23/69 (33%), Gaps = 4/69 (5%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++A +  K  ++ +A + + +  +     GV+           Y      +A    E   
Sbjct: 651 QEADMAYKHGSYQEAIKMYEELLKQ----GVSADLYYNLGNAYYRTDDLTKAILAYERAS 706

Query: 122 TQYPESKNV 130
              P   ++
Sbjct: 707 LLSPGDDDI 715


>gi|225620899|ref|YP_002722157.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
 gi|225215719|gb|ACN84453.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
          Length = 952

 Score = 42.4 bits (99), Expect = 0.066,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 29/73 (39%), Gaps = 3/73 (4%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           ++  + + +   + + + KA   FN+  +  P   +A    L      Y   KY++A   
Sbjct: 451 EKAYFNRGLSKAQLERYKKAIVDFNKVIKLNPKNEIA---YLARGISNYELKKYEEAIVD 507

Query: 117 GEEYITQYPESKN 129
             + I   P ++ 
Sbjct: 508 FNKAIKLNPNNEE 520



 Score = 38.9 bits (90), Expect = 0.75,   Method: Composition-based stats.
 Identities = 28/219 (12%), Positives = 67/219 (30%), Gaps = 63/219 (28%)

Query: 49  DSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQC-----SRDFPF------------- 89
           DS+        +Y  + +  ++ + + +A +YFN+           +             
Sbjct: 34  DSIEKYNDDEYLYFNRGLEKIESKLYEEAIKYFNKTIGLNQKNRDAYFFRGLAKTELKLY 93

Query: 90  ----AGVARKSLLMS-----------AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
                       L             A        Y++A     + I   P+++     Y
Sbjct: 94  EEAIEDFNESIELNLKNWESYFARGIAKANLKL--YEEAIEDFNKSIELNPKNEK---AY 148

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
           +  G+S A++        +  +  +   ++++E    +     A F     + +L   E 
Sbjct: 149 FNRGISKAKL--------KKYEESIVDFNKVIELNPKNE---KAYFNRGFAKAKLKKYEK 197

Query: 195 EIGRY-------------YLKRGEYVAAIPRFQLVLANY 220
            I  +             Y  RG   A + R++  + ++
Sbjct: 198 SIVDFNNAIKLDSKNVEVYFYRGISKAKLERYEESIVDF 236



 Score = 38.9 bits (90), Expect = 0.81,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 64/202 (31%), Gaps = 48/202 (23%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
              + + V   K + + ++   FN+  +  P      +S       +    KY++A +  
Sbjct: 282 ESYFNRGVSKAKLEKYEESIVDFNEVIKLNP---KNVESYFNRGVSKAKLEKYEEAIADF 338

Query: 118 EEYITQYPESKNVDYVYYLVGMS------YAQMIRDVP--------------------YD 151
              I   P  +    VY+  G++      Y + I D                       D
Sbjct: 339 NNAIKLNPNDEK---VYFASGLAKADLERYEESIVDFNEVIKLNSKNVEAYFYRGVAKAD 395

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY------------ 199
               +  +   + +++    +     A FY  V + +L   E  I  +            
Sbjct: 396 LERYEESIVDFNEVIKLDPKN---VEAYFYRGVSKAKLEKYEESIIDFNEVITFNPNDEK 452

Query: 200 -YLKRGEYVAAIPRFQLVLANY 220
            Y  RG   A + R++  + ++
Sbjct: 453 AYFNRGLSKAQLERYKKAIVDF 474



 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 71/190 (37%), Gaps = 30/190 (15%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
            D       + + ++  + + +   K + + ++   FN+     P      K+     F 
Sbjct: 132 EDFNKSIELNPKNEKAYFNRGISKAKLKKYEESIVDFNKVIELNP---KNEKAYFNRGFA 188

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           +    KY+++       I    +SKNV+ VY+  G+S A++ R         +  +   +
Sbjct: 189 KAKLKKYEKSIVDFNNAIKL--DSKNVE-VYFYRGISKAKLER--------YEESIVDFN 237

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY-------------YLKRGEYVAAI 210
             ++   +S  V    FY  V + +L   E  I  +             Y  RG   A +
Sbjct: 238 NAIKL--DSKNV-EVYFYRGVSKAKLERYEESIVDFNEIIKLNPKNVESYFNRGVSKAKL 294

Query: 211 PRFQLVLANY 220
            +++  + ++
Sbjct: 295 EKYEESIVDF 304


>gi|224368241|ref|YP_002602404.1| hypothetical protein HRM2_11280 [Desulfobacterium autotrophicum
           HRM2]
 gi|223690957|gb|ACN14240.1| conserved hypothetical protein [Desulfobacterium autotrophicum
           HRM2]
          Length = 345

 Score = 42.4 bits (99), Expect = 0.066,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 44/115 (38%), Gaps = 7/115 (6%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
              ++FF + V  +      +   +Y+D+          Y  A       + S A   F 
Sbjct: 52  LIPSLFFILVVMAVDPTFGSNKGGIYIDADMQ-------YGYAQQCFNSGDPSTALVEFK 104

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
           +    FP     R++  ++    Y+  +Y++A  + E ++  + +   V   Y++
Sbjct: 105 RFIHFFPEDTRVRQAQFLTGQAYYATKRYEEARKIFETFLFPFSQDPLVIEAYFM 159



 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 35/96 (36%), Gaps = 10/96 (10%)

Query: 96  SLLMSAFVQ--YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
           + +   + Q  +++G    A    + +I  +PE   V    +L G +Y    R       
Sbjct: 80  ADMQYGYAQQCFNSGDPSTALVEFKRFIHFFPEDTRVRQAQFLTGQAYYATKR------- 132

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
             +   +     +  ++  P V  A F V+    Q+
Sbjct: 133 -YEEARKIFETFLFPFSQDPLVIEAYFMVSRTLEQM 167



 Score = 35.5 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 27/96 (28%), Gaps = 14/96 (14%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
            L    R +  +     V+ A+                 G+ Y     Y  A   F+  L
Sbjct: 99  ALVEFKRFIHFFPEDTRVRQAQ--------------FLTGQAYYATKRYEEARKIFETFL 144

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
             +S      EA   +      +    +A  V+  +
Sbjct: 145 FPFSQDPLVIEAYFMVSRTLEQMDKAGQAETVLQNL 180


>gi|206603643|gb|EDZ40123.1| Probable cellulose synthase operon protein C [Leptospirillum sp.
           Group II '5-way CG']
          Length = 964

 Score = 42.4 bits (99), Expect = 0.066,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 57/188 (30%), Gaps = 45/188 (23%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
             + F+IA         + S    L   +      ++Y  A  ++   +  +A E++ + 
Sbjct: 13  CLLSFTIAALVSGALLSEVSDTYAL---SGDEALGQLYRNARFWMNRGDLVRASEFWTRI 69

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV------------- 130
               P      ++L     V    G  ++A +L +     +P +  +             
Sbjct: 70  LDLRPDDP---RALTNLGIVSAQRGDLKKARTLLDRLSRSHPGNPGIGKIRFAIRLGKLD 126

Query: 131 ---------------------DYVYYLVGM-----SYAQMIRDVPYDQRATKLMLQYMSR 164
                                DY  YL G         ++++         +  +Q + +
Sbjct: 127 GKWLLLARKEKKEQHFSAAYHDYERYLKGTPPRGGIALEVLQTESAVPGHFRNAVQGLRQ 186

Query: 165 IVERYTNS 172
           + +R+  S
Sbjct: 187 LADRHPGS 194


>gi|154484241|ref|ZP_02026689.1| hypothetical protein EUBVEN_01953 [Eubacterium ventriosum ATCC
           27560]
 gi|149734718|gb|EDM50635.1| hypothetical protein EUBVEN_01953 [Eubacterium ventriosum ATCC
           27560]
          Length = 692

 Score = 42.4 bits (99), Expect = 0.066,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 35/92 (38%), Gaps = 4/92 (4%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
             +IAV           +  ++ S T   Y   +Y KA+   +  +++ A + +N   R 
Sbjct: 332 LTTIAVDNNGNIWTADGKKGFIQSFTPTEYATTIY-KALQEYENGDYTDALKDWNYVLRL 390

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
              + +A       A   Y+  +Y +A    E
Sbjct: 391 NQMSVLAHNG---VAKAYYNDEEYDKAMEHFE 419


>gi|114648905|ref|XP_509562.2| PREDICTED: intraflagellar transport protein 88 homolog isoform 9
           [Pan troglodytes]
 gi|114648907|ref|XP_001147872.1| PREDICTED: intraflagellar transport 88 homolog isoform 6 [Pan
           troglodytes]
 gi|114648909|ref|XP_001147353.1| PREDICTED: intraflagellar transport 88 homolog isoform 1 [Pan
           troglodytes]
 gi|114648911|ref|XP_001147810.1| PREDICTED: intraflagellar transport 88 homolog isoform 5 [Pan
           troglodytes]
 gi|114648913|ref|XP_001147652.1| PREDICTED: intraflagellar transport 88 homolog isoform 3 [Pan
           troglodytes]
 gi|114648917|ref|XP_001148082.1| PREDICTED: intraflagellar transport 88 homolog isoform 8 [Pan
           troglodytes]
          Length = 824

 Score = 42.4 bits (99), Expect = 0.066,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 85/303 (28%), Gaps = 64/303 (21%)

Query: 2   SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60
                +A+ I +    +  +       +++  + +G +  Q+S    +   +D      +
Sbjct: 428 QKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 487

Query: 61  YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
             K        ++ KA E++      D   +     +L           +  +A      
Sbjct: 488 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 540

Query: 120 YITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKL--------- 157
           ++  +   +N   V Y +   Y              Q++  +P D +             
Sbjct: 541 FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREG 600

Query: 158 ----MLQYMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEI 196
                 QY       +               ++ + + A  Y     + +      ++ +
Sbjct: 601 DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMV 660

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEAREVVSL 252
              + + G         Q  L  Y D         E +  LV     L L D A+E    
Sbjct: 661 ASCFRRSGN-------SQKALDTYKDTHRKFPENVECLRFLVRLCTDLGLKD-AQEYARK 712

Query: 253 IQE 255
           ++ 
Sbjct: 713 LKR 715



 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 66/222 (29%), Gaps = 67/222 (30%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117
            KAV +L+++++++A E      +    + V   +    + + Y    + QA+S      
Sbjct: 420 NKAVTYLRQKDYNQAVEILKVLEKKD--SRVKSAAATNLSALYYMGKDFAQASSYADIAV 477

Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147
             + Y    P    +K      N DY                     Y +G++Y ++ R 
Sbjct: 478 NSDRY---NPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNR- 533

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
                      L    ++     NS                 A    +I   Y       
Sbjct: 534 -------LDEALDCFLKLHAILRNS-----------------AEVLYQIANIYELMENPS 569

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
            AI     V++           +++L E Y       +A + 
Sbjct: 570 QAIEWLMQVVSVIPTDPQV---LSKLGELYDREGDKSQAFQY 608


>gi|29346313|ref|NP_809816.1| hypothetical protein BT_0903 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|253568266|ref|ZP_04845677.1| BatE [Bacteroides sp. 1_1_6]
 gi|29338208|gb|AAO76010.1| BatE, TRP domain containing protein [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|251842339|gb|EES70419.1| BatE [Bacteroides sp. 1_1_6]
          Length = 277

 Score = 42.4 bits (99), Expect = 0.066,   Method: Composition-based stats.
 Identities = 18/121 (14%), Positives = 43/121 (35%), Gaps = 13/121 (10%)

Query: 19  LYKFALTIFFSIAV-CFLVGWERQSS-RDVYLDSV-------TDVRYQREVYEKAVLFLK 69
           + K    I  S++V CF  G +   S +    DS+       +D + +     +      
Sbjct: 1   MKKILFFILLSMSVTCFGQGTQSIDSIQITEADSIHAGSHTFSDTKLEDVTKAEGDSAYI 60

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
           + +++ A + +    ++      +           Y AG+  +A    E  +   P + +
Sbjct: 61  KDDYATAIQIYESLLKN---GE-SADVYYNLGNSYYKAGEIAKAVLNYERALLMKPGNSD 116

Query: 130 V 130
           +
Sbjct: 117 I 117


>gi|145501341|ref|XP_001436652.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124403794|emb|CAK69255.1| unnamed protein product [Paramecium tetraurelia]
          Length = 644

 Score = 42.4 bits (99), Expect = 0.067,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 7/78 (8%)

Query: 66  LFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
             +K+Q +  A  Y N   +  P +    ++L + A+  Y    + QA ++ E+ +  YP
Sbjct: 18  TLIKDQKYKDAINYLNYELQFCPKS----RALSLLAYCHYMNQDFSQAVAIYEQLVKYYP 73

Query: 126 ESKNVDYVYYLVGMSYAQ 143
             +  DY  YL   SY +
Sbjct: 74  --EIDDYKIYL-AQSYYK 88


>gi|145492455|ref|XP_001432225.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124399335|emb|CAK64828.1| unnamed protein product [Paramecium tetraurelia]
          Length = 479

 Score = 42.4 bits (99), Expect = 0.067,   Method: Composition-based stats.
 Identities = 19/153 (12%), Positives = 41/153 (26%), Gaps = 30/153 (19%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL-MSAFVQYSAGK 109
           + +     ++ E      K  NF +A E++   +         R   L   AF       
Sbjct: 2   IPNSPEAEKLKELGNEQFKSSNFQRAIEFYTAAADKANGNQ--RLVCLSNRAFAHIKMEN 59

Query: 110 YQQAASLGEE-------YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
           Y  A    +E       +I            YY  G +Y  + +         +   +  
Sbjct: 60  YGLAIIDADEILKEDSGFIK----------AYYRKGSAYLLLGKFDD-----ARKEFKRA 104

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
             + +           +  +   +  +  +E  
Sbjct: 105 DTLTQG-----KDADIQAKLKQIKQAIYEREFA 132


>gi|295401536|ref|ZP_06811505.1| Tetratricopeptide TPR_2 repeat protein [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294976448|gb|EFG52057.1| Tetratricopeptide TPR_2 repeat protein [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 492

 Score = 42.4 bits (99), Expect = 0.067,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 38/98 (38%), Gaps = 10/98 (10%)

Query: 35  LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGV 92
           L+   +    D   D   D+  Q+E   +A L L+++ F +A          +P  ++  
Sbjct: 132 LMELLKIDQEDENGDEQDDLITQQE---RARLLLEKEKFPEAIRLLEMIIDRYPEFWSAY 188

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
                   A   +  G  Q+A  + E+ + + P + + 
Sbjct: 189 N-----NLALAYFYNGNVQKAQEIIEQVLERNPGNLHA 221



 Score = 36.2 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 80/214 (37%), Gaps = 32/214 (14%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
            ++K +   ++++  KA +Y       D   A  A +     A V    G+YQ +     
Sbjct: 24  YFKKGMQAYQQRDLYKAKKYLERAVQYDGNNASFALQ----LASVLAELGEYQASNQWL- 78

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            +   +   + +D  +Y +  ++A +              ++Y    + R  +  + +  
Sbjct: 79  -FKIIHELDETMDECFYFLANNFAHL--------GLFHEAMKYAETYLARDPDGHFAEDT 129

Query: 179 RFYVTVGR------------NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
              + + +            + +  +E    R  L++ ++  AI   ++++  Y +   A
Sbjct: 130 EDLMELLKIDQEDENGDEQDDLITQQER--ARLLLEKEKFPEAIRLLEMIIDRYPEFWSA 187

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
              +A    AY     + +A+E++  + ER P  
Sbjct: 188 YNNLAL---AYFYNGNVQKAQEIIEQVLERNPGN 218


>gi|256076828|ref|XP_002574711.1| o-linked n-acetylglucosamine transferase ogt [Schistosoma mansoni]
 gi|238659924|emb|CAZ30944.1| o-linked n-acetylglucosamine transferase, ogt, putative
           [Schistosoma mansoni]
          Length = 1084

 Score = 42.4 bits (99), Expect = 0.067,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 46/127 (36%), Gaps = 21/127 (16%)

Query: 103 VQYSAGKYQQAASLGEEYITQYP--ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
             Y   ++ +A    +  I   P  E+  + +  YL  ++  Q+++     Q+   L   
Sbjct: 555 AYYQLNQFNKAIFDIQRVIHLSPHLENHYLLFANYLHKLANTQLVQHS--IQQYLSLAES 612

Query: 161 YMSRIVE--RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
              + VE  R T S              N L       G+YY+K G Y++AI  F   + 
Sbjct: 613 EKHKQVEQMRCTKSEKA--------EIYNHL-------GQYYMKIGNYLSAIHAFTTFIQ 657

Query: 219 NYSDAEH 225
                 H
Sbjct: 658 YNPHRPH 664


>gi|255072537|ref|XP_002499943.1| chloroplast envelope protein translocase family [Micromonas sp.
           RCC299]
 gi|226515205|gb|ACO61201.1| chloroplast envelope protein translocase family [Micromonas sp.
           RCC299]
          Length = 475

 Score = 42.4 bits (99), Expect = 0.067,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 36/142 (25%), Gaps = 25/142 (17%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQ 112
                +   A    KE  ++KA E +++     P       ++L    AF       Y  
Sbjct: 3   ETPETLKAAANALFKEHKYAKAVEAYSRALEVSP-----NNAILLSNRAFAHVRLENYGS 57

Query: 113 AASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           A     + I   P      Y   YY  G S   +              L+    +     
Sbjct: 58  AIEDASKAIESDPN-----YIKAYYRRGTSQYAL--------GHLTDALKDFKTVCRMQP 104

Query: 171 NSPYVKGARFYVTVGRNQLAAK 192
                   R  +      L  K
Sbjct: 105 QDR---DGRMKLKECEGALRKK 123


>gi|114677991|ref|XP_512768.2| PREDICTED: serine/threonine-protein phosphatase 5 isoform 4 [Pan
           troglodytes]
          Length = 499

 Score = 42.4 bits (99), Expect = 0.067,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 49/156 (31%), Gaps = 31/156 (19%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF-- 102
              +   ++   E+  +A  + K +++  A ++++Q     P        +S    A+  
Sbjct: 18  EPPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS---LAYLR 74

Query: 103 --VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
                Y+ G   +A  L ++YI            YY    S   +           +  L
Sbjct: 75  TECYGYALGDATRAIELDKKYIK----------GYYRRAASNMAL--------GKFRAAL 116

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           +    +V+   +      A+         +  K  E
Sbjct: 117 RDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 149


>gi|94968182|ref|YP_590230.1| N-acetylmuramoyl-L-alanine amidase [Candidatus Koribacter
           versatilis Ellin345]
 gi|94550232|gb|ABF40156.1| N-acetylmuramoyl-L-alanine amidase [Candidatus Koribacter
           versatilis Ellin345]
          Length = 731

 Score = 42.4 bits (99), Expect = 0.067,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 41/121 (33%), Gaps = 16/121 (13%)

Query: 73  FSKAYEYFNQCSRDFPFAGVARKSLLMSAFV------QYSAGKY-QQAASLGEEYITQ-Y 124
           + K  E + +     P +  A  S+L  A V       +   K  + A +  E ++ + Y
Sbjct: 67  YQKVIEAYKKVYFTTPASSKADASILAVAEVMAEEGRHFQDQKPLKDAIAQYE-FLRKEY 125

Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
           P SK      + +G    + ++D                  ++RY  S  V  A   +  
Sbjct: 126 PGSKYRMDALFTIGQIQKEDLKDPA-------AAKATFEEFLQRYPKSQLVDQAHKALAD 178

Query: 185 G 185
            
Sbjct: 179 L 179



 Score = 38.9 bits (90), Expect = 0.67,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 27/79 (34%), Gaps = 13/79 (16%)

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
           DQ+  K  +     + + Y  S Y   A F +         KE           +  AA 
Sbjct: 107 DQKPLKDAIAQYEFLRKEYPGSKYRMDALFTIGQI-----QKE--------DLKDPAAAK 153

Query: 211 PRFQLVLANYSDAEHAEEA 229
             F+  L  Y  ++  ++A
Sbjct: 154 ATFEEFLQRYPKSQLVDQA 172


>gi|5453958|ref|NP_006238.1| serine/threonine-protein phosphatase 5 isoform 1 [Homo sapiens]
 gi|1709744|sp|P53041|PPP5_HUMAN RecName: Full=Serine/threonine-protein phosphatase 5; Short=PP5;
           AltName: Full=Protein phosphatase T; Short=PP-T;
           Short=PPT
 gi|4558638|gb|AAD22669.1|AC007193_3 PPP5_HUMAN [Homo sapiens]
 gi|12805033|gb|AAH01970.1| Protein phosphatase 5, catalytic subunit [Homo sapiens]
 gi|30583389|gb|AAP35939.1| protein phosphatase 5, catalytic subunit [Homo sapiens]
 gi|60654847|gb|AAX31988.1| protein phosphatase 5 catalytic subunit [synthetic construct]
 gi|60654849|gb|AAX31989.1| protein phosphatase 5 catalytic subunit [synthetic construct]
 gi|119577820|gb|EAW57416.1| protein phosphatase 5, catalytic subunit, isoform CRA_b [Homo
           sapiens]
 gi|119577821|gb|EAW57417.1| protein phosphatase 5, catalytic subunit, isoform CRA_b [Homo
           sapiens]
 gi|261858320|dbj|BAI45682.1| protein phosphatase 5, catalytic subunit [synthetic construct]
          Length = 499

 Score = 42.4 bits (99), Expect = 0.067,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 49/156 (31%), Gaps = 31/156 (19%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF-- 102
              +   ++   E+  +A  + K +++  A ++++Q     P        +S    A+  
Sbjct: 18  EPPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS---LAYLR 74

Query: 103 --VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
                Y+ G   +A  L ++YI            YY    S   +           +  L
Sbjct: 75  TECYGYALGDATRAIELDKKYIK----------GYYRRAASNMAL--------GKFRAAL 116

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           +    +V+   +      A+         +  K  E
Sbjct: 117 RDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 149


>gi|218961685|ref|YP_001741460.1| hypothetical protein; putative signal peptide [Candidatus
           Cloacamonas acidaminovorans]
 gi|167730342|emb|CAO81254.1| hypothetical protein; putative signal peptide [Candidatus
           Cloacamonas acidaminovorans]
          Length = 679

 Score = 42.4 bits (99), Expect = 0.068,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 40/94 (42%), Gaps = 1/94 (1%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF-V 103
             Y + +T      E++  A    +++NF  A  Y++Q   ++       K+  M AF +
Sbjct: 569 KKYPERITLTMTAEELFNYADNAARQRNFKDAIMYYDQIINNYKNNSDDYKASFMKAFLI 628

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
                +   A  L +E++ +YP     D   +++
Sbjct: 629 AEEMKQKDLALQLFKEFLQKYPTGDLNDSAQFMI 662


>gi|170738881|ref|YP_001767536.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium sp.
           4-46]
 gi|168193155|gb|ACA15102.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium sp.
           4-46]
          Length = 1056

 Score = 42.4 bits (99), Expect = 0.068,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 43/138 (31%), Gaps = 17/138 (12%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            +   F  + ++ +A   ++   +  P + VA           Y  G+Y +A +     I
Sbjct: 65  NRGFAFRNKGDYDRAIADYDHALQIDPNSVVAFN---NRGDAFYHKGEYDRAIADYNRSI 121

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                S +   VY   G+++                 +   ++ +       Y+  A   
Sbjct: 122 KL---SSDKAAVYNNRGLAFFSK--------EEYDRAIADYNQALRLDP--KYLSAALNR 168

Query: 182 VTVGRNQLAAKEVEIGRY 199
               R++    +  I  Y
Sbjct: 169 GDAFRSK-GEYDRAIADY 185


>gi|37521122|ref|NP_924499.1| hypothetical protein gll1553 [Gloeobacter violaceus PCC 7421]
 gi|35212118|dbj|BAC89494.1| gll1553 [Gloeobacter violaceus PCC 7421]
          Length = 357

 Score = 42.4 bits (99), Expect = 0.068,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 41/126 (32%), Gaps = 26/126 (20%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS-- 115
           +++++ A     + N++KA + +N+  +    +     + +     +Y     + AA   
Sbjct: 59  QQLFKDAYAQQNKGNYTKALKIWNEVLQR---SPDEPAAYVNRGITRYLMRDLRGAADDF 115

Query: 116 --LGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
               +            DY   Y+   + Y         D +     +    R +E   N
Sbjct: 116 GLAIDR---------KADYANAYFNRAVVY--------NDLKEFNRAVDDYGRYLELAPN 158

Query: 172 SPYVKG 177
           +P    
Sbjct: 159 APDAPQ 164


>gi|897761|emb|CAA61595.1| protein phosphatase 5 [Homo sapiens]
          Length = 493

 Score = 42.4 bits (99), Expect = 0.068,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 49/156 (31%), Gaps = 31/156 (19%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF-- 102
              +   ++   E+  +A  + K +++  A ++++Q     P        +S    A+  
Sbjct: 12  EPPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS---LAYLR 68

Query: 103 --VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
                Y+ G   +A  L ++YI            YY    S   +           +  L
Sbjct: 69  TECYGYALGDATRAIELDKKYIK----------GYYRRAASNMAL--------GKFRAAL 110

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           +    +V+   +      A+         +  K  E
Sbjct: 111 RDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 143


>gi|254517521|ref|ZP_05129577.1| tetratricopeptide TPR_2 repeat protein [Clostridium sp. 7_2_43FAA]
 gi|226911270|gb|EEH96471.1| tetratricopeptide TPR_2 repeat protein [Clostridium sp. 7_2_43FAA]
          Length = 388

 Score = 42.4 bits (99), Expect = 0.068,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 43/117 (36%), Gaps = 9/117 (7%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           RE Y KA     E+ ++               + +    + + A      G   +A    
Sbjct: 270 RENYMKATDSFDEEKYNDTKVILESTIIYAENSHLNDDIMFLLASTYEKLGDNNEAIKNF 329

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
           E+YI+ Y     ++  YY + + Y    RD+  D         Y   ++ +Y+NS Y
Sbjct: 330 EKYISSYENGNYIEESYYKIALLY----RDLNKD-----KSKYYAKELISKYSNSIY 377


>gi|255524473|ref|ZP_05391428.1| TPR repeat-containing protein [Clostridium carboxidivorans P7]
 gi|296185974|ref|ZP_06854379.1| tetratricopeptide repeat protein [Clostridium carboxidivorans P7]
 gi|255511769|gb|EET88054.1| TPR repeat-containing protein [Clostridium carboxidivorans P7]
 gi|296049242|gb|EFG88671.1| tetratricopeptide repeat protein [Clostridium carboxidivorans P7]
          Length = 279

 Score = 42.4 bits (99), Expect = 0.069,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 25/72 (34%), Gaps = 9/72 (12%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           EK + FL    + KA  YFN+      ++      R       +      +Y++A    +
Sbjct: 10  EKGLEFLNNGEYEKAEPYFNKVLNIDNNYAEGYYFR------GYCYVKMKEYEKALMDLD 63

Query: 119 EYITQYPESKNV 130
           + I   P     
Sbjct: 64  KSIKLDPSDSRA 75


>gi|329118009|ref|ZP_08246722.1| hypothetical protein HMPREF9123_0149 [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327465897|gb|EGF12169.1| hypothetical protein HMPREF9123_0149 [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 220

 Score = 42.4 bits (99), Expect = 0.069,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 40/123 (32%), Gaps = 10/123 (8%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           E A     + +++ A             +   R+++ +        G  +    +G  Y+
Sbjct: 105 ETARRLYAQGSYTAAARSLQYAESGGSGSDADRRAMHLLLQSHRKLGNCESVIQIGSRYV 164

Query: 122 TQYPESKNVDYVYYLVGMS-YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +++  S       + VG   +    RDV  D            +++  Y  SP  + A  
Sbjct: 165 SRFARSPEAADTLFTVGQCQWDMQQRDVARD---------TWRKLMRLYPASPAAQKAAR 215

Query: 181 YVT 183
           +  
Sbjct: 216 HAD 218


>gi|237749148|ref|ZP_04579628.1| N-acetylglucosaminyl transferase [Oxalobacter formigenes OXCC13]
 gi|229380510|gb|EEO30601.1| N-acetylglucosaminyl transferase [Oxalobacter formigenes OXCC13]
          Length = 391

 Score = 42.4 bits (99), Expect = 0.069,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 7/70 (10%)

Query: 52  TDVRYQREV---YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
            D+  ++++   YE    FLK     +A E F + +   P++  AR++LL          
Sbjct: 100 PDLPAEQQMQAQYELGQDFLKAGLLDRAEEVFQKLTET-PYSIQARRALLEI---FQREK 155

Query: 109 KYQQAASLGE 118
           ++QQA    E
Sbjct: 156 EWQQAIEAAE 165


>gi|304409846|ref|ZP_07391466.1| tol-pal system protein YbgF [Shewanella baltica OS183]
 gi|307304202|ref|ZP_07583955.1| tol-pal system protein YbgF [Shewanella baltica BA175]
 gi|304352364|gb|EFM16762.1| tol-pal system protein YbgF [Shewanella baltica OS183]
 gi|306913100|gb|EFN43523.1| tol-pal system protein YbgF [Shewanella baltica BA175]
          Length = 249

 Score = 42.4 bits (99), Expect = 0.070,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 40/124 (32%), Gaps = 22/124 (17%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
              KY  A      +I QYP+S       Y +G                     Q    +
Sbjct: 139 KERKYDDAIPAFRAFIKQYPDSVYAANANYWLGQLLFNKSEFA--------EAKQAFKTV 190

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           V+R+++S     +   + +                 K G+   A   +Q V+ +Y+++  
Sbjct: 191 VDRFSDSNKRGDSLVKLGMIAE--------------KTGDKAGATQYYQQVVKDYANSAA 236

Query: 226 AEEA 229
           A  A
Sbjct: 237 ARIA 240



 Score = 38.9 bits (90), Expect = 0.82,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 47/131 (35%), Gaps = 17/131 (12%)

Query: 61  YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL--- 116
           YE AV   LKE+ +  A   F    + +P +  A  +      + ++  ++ +A      
Sbjct: 130 YESAVNLVLKERKYDDAIPAFRAFIKQYPDSVYAANANYWLGQLLFNKSEFAEAKQAFKT 189

Query: 117 -GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
             + +        +         +    MI +   D+       QY  ++V+ Y NS   
Sbjct: 190 VVDRFSDSNKRGDS---------LVKLGMIAEKTGDKAG---ATQYYQQVVKDYANSAAA 237

Query: 176 KGARFYVTVGR 186
           + A+  +   +
Sbjct: 238 RIAQQQLAAIK 248


>gi|326386203|ref|ZP_08207827.1| hypothetical protein Y88_2095 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326209428|gb|EGD60221.1| hypothetical protein Y88_2095 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 350

 Score = 42.4 bits (99), Expect = 0.071,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 34/105 (32%), Gaps = 20/105 (19%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                +   V++Y            ++  RN L       GR YL   +  AA    Q  
Sbjct: 242 EAETALLDFVQKYPKH-------KRISYARNLL-------GRAYLDDNKPGAA---AQWF 284

Query: 217 LANYSDAEHAEEA---MARLVEAYVALALMDEAREVVSLIQERYP 258
             NY   + A+ A   +  L  A   L     A   +   ++ YP
Sbjct: 285 AQNYQADKAADRAPDSLLYLAVAMAKLKQPQRACIALGEFKDTYP 329


>gi|311265978|ref|XP_003130917.1| PREDICTED: intraflagellar transport protein 88 homolog [Sus scrofa]
          Length = 377

 Score = 42.4 bits (99), Expect = 0.071,   Method: Composition-based stats.
 Identities = 33/259 (12%), Positives = 75/259 (28%), Gaps = 55/259 (21%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLM 99
           Q+S    L   +D      +  K        ++ KA E++      D   +     +L  
Sbjct: 29  QASSYADLAVNSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYN 84

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY-------------AQMIR 146
                    +  +A      ++  +   +N  +V Y +   Y              Q++ 
Sbjct: 85  IGLTYKKLNRLDEALDC---FLKLHAILRNSAHVLYQIANIYELMEDPGQAVEWLMQLLS 141

Query: 147 DVPYDQRATKL-------------MLQYMSRIVERYTNS--------PYVKGAR------ 179
            VP D R                   QY       + +S         Y    +      
Sbjct: 142 VVPTDSRVLSKLGGLYDSEGDKSQAFQYYYESYRYFPSSIDVIEWLGAYYVDTQFCEKAI 201

Query: 180 ---FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                 ++ +      ++ +   + + G Y  A+  ++ +   + +     E +  LV  
Sbjct: 202 QYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRMFPE---NAECLRFLVRL 258

Query: 237 YVALALMDEAREVVSLIQE 255
              + L  E +E  + ++ 
Sbjct: 259 CTDIGLK-EVQEYAAKLKR 276


>gi|218709112|ref|YP_002416733.1| hypothetical protein VS_1118 [Vibrio splendidus LGP32]
 gi|218322131|emb|CAV18245.1| Hypothetical protein VS_1118 [Vibrio splendidus LGP32]
          Length = 265

 Score = 42.4 bits (99), Expect = 0.071,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 46/127 (36%), Gaps = 15/127 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            Q   D+   QR     +    +  + + +S +     +++              G+ Y 
Sbjct: 152 YQNAVDMILKQRDYTGAIAAFQKFQKDFPDSTFTPNTHYWL--------------GQLYF 197

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + +   A+  F  V+ +Y D+    +A+ +L +         +A++    +   YP   
Sbjct: 198 AKKQDKEAVKSFAAVV-SYKDSNKRSDALVKLGDIATRNNNATQAKKYYQQVVTEYPNSA 256

Query: 262 WARYVET 268
            A+  +T
Sbjct: 257 SAKVAKT 263



 Score = 40.1 bits (93), Expect = 0.33,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 58/158 (36%), Gaps = 17/158 (10%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDF 87
           +     +     + S+D      TDV  ++  Y+ AV   LK+++++ A   F +  +DF
Sbjct: 121 AAGTATVAVTASEGSKDASGTFSTDVD-EQTAYQNAVDMILKQRDYTGAIAAFQKFQKDF 179

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAA---SLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
           P +     +      + ++  + ++A    +    Y      S  +              
Sbjct: 180 PDSTFTPNTHYWLGQLYFAKKQDKEAVKSFAAVVSYKDSNKRSDAL------------VK 227

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
           + D+           +Y  ++V  Y NS   K A+ ++
Sbjct: 228 LGDIATRNNNATQAKKYYQQVVTEYPNSASAKVAKTHL 265


>gi|126662666|ref|ZP_01733665.1| aerotolerance-related exported protein [Flavobacteria bacterium
           BAL38]
 gi|126626045|gb|EAZ96734.1| aerotolerance-related exported protein [Flavobacteria bacterium
           BAL38]
          Length = 252

 Score = 42.4 bits (99), Expect = 0.071,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 22/70 (31%), Gaps = 3/70 (4%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           ++KA     +  +  A E F            +       A   Y  GK   +    E+ 
Sbjct: 25  FKKANDLYNKGKYQNALETFETIVNQ---GNESADLYFNMANCYYKLGKVAPSIYNYEKA 81

Query: 121 ITQYPESKNV 130
           +   P+ + +
Sbjct: 82  LLLNPDDEAI 91


>gi|113970701|ref|YP_734494.1| hypothetical protein Shewmr4_2366 [Shewanella sp. MR-4]
 gi|114047930|ref|YP_738480.1| hypothetical protein Shewmr7_2438 [Shewanella sp. MR-7]
 gi|113885385|gb|ABI39437.1| conserved hypothetical protein [Shewanella sp. MR-4]
 gi|113889372|gb|ABI43423.1| conserved hypothetical protein [Shewanella sp. MR-7]
          Length = 250

 Score = 42.4 bits (99), Expect = 0.071,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 40/124 (32%), Gaps = 22/124 (17%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
              KY  A      +I QYP+S       Y +G                     Q  + +
Sbjct: 140 KERKYDDAIPAFRAFIKQYPDSVYAANANYWLGQLLFNKSEFA--------EAKQAFNTV 191

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           V R+++S     +   + +                 K G+   A   +Q V+ +Y+++  
Sbjct: 192 VTRFSDSNKRGDSLVKLGMIAE--------------KTGDKAGATQYYQQVVKDYANSAA 237

Query: 226 AEEA 229
           A  A
Sbjct: 238 ARIA 241



 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 46/131 (35%), Gaps = 17/131 (12%)

Query: 61  YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE- 118
           YE AV   LKE+ +  A   F    + +P +  A  +      + ++  ++ +A      
Sbjct: 131 YESAVNLVLKERKYDDAIPAFRAFIKQYPDSVYAANANYWLGQLLFNKSEFAEAKQAFNT 190

Query: 119 ---EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
               +        +         +    MI +   D+       QY  ++V+ Y NS   
Sbjct: 191 VVTRFSDSNKRGDS---------LVKLGMIAEKTGDKAG---ATQYYQQVVKDYANSAAA 238

Query: 176 KGARFYVTVGR 186
           + A+  +   +
Sbjct: 239 RIAQQQLAAIK 249


>gi|328768058|gb|EGF78105.1| hypothetical protein BATDEDRAFT_13321 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 709

 Score = 42.4 bits (99), Expect = 0.071,   Method: Composition-based stats.
 Identities = 43/296 (14%), Positives = 84/296 (28%), Gaps = 56/296 (18%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVC-FLVGWERQSSRDVYLDSVTDVRYQREVY 61
               +AI   + +  +  K   T   +++   FL G  +QS R        D    +   
Sbjct: 339 KDFTQAIETLKTFEKKDPKLVGTAATNLSFLYFLEGDYKQSERYADTAIEHDRYNAKAQT 398

Query: 62  EKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
            +      +  + +A + +    + D     +  +++     V      Y +A    + +
Sbjct: 399 NRGNCDFVKGKYDQARDRYHEAINVD----AICTEAMYNLGLVYKRMNNYNEAL---QWF 451

Query: 121 ITQYPESKNVDYVYYLVGMSYAQM-------------IRDVPYDQRATKL---------- 157
              +   ++   V Y +   Y Q              I  VP D    +           
Sbjct: 452 EKLHSILRSSPEVIYQIADIYNQQGSTQQAMEWFNILISVVPTDPSVLEKLGSMFERDGD 511

Query: 158 ---MLQYMSRIVERYT--------------NSPYVKGARF---YVTVGRNQLAAKEVEIG 197
                QY S     Y               +    + A        + +       + I 
Sbjct: 512 KSQAFQYYSESYRYYPCNMDVISWLGAYYVDCEVYEQAIQFFERAILIQPNQVRWPLMIA 571

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
             Y + G Y  A   ++ +   + D     E +  LV     L +  EA E  S +
Sbjct: 572 SCYRRSGNYQQAFDTYKRIHEKFPD---NIECLRFLVRICTDLGMK-EATEYASKL 623


>gi|78776856|ref|YP_393171.1| von Willebrand factor, type A [Sulfurimonas denitrificans DSM 1251]
 gi|78497396|gb|ABB43936.1| von Willebrand factor, type A [Sulfurimonas denitrificans DSM 1251]
          Length = 595

 Score = 42.4 bits (99), Expect = 0.071,   Method: Composition-based stats.
 Identities = 15/101 (14%), Positives = 36/101 (35%), Gaps = 11/101 (10%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +  F       ++V  L+           +    D++  +E Y  A       N+ ++ +
Sbjct: 313 MSSFGRKNSLHVSVFLLLALSLHQDAQAGIFDFMDLKKAKEAYNGA-------NYEESAK 365

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            +++    +     + +S   SA   Y   KY++A     +
Sbjct: 366 LYDE----YAQKSKSPQSYYNSANAYYKQQKYKEAIEAYNK 402



 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 6/85 (7%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G   + S  +Y +     +  +  Y  A  + K+Q + +A E +N+ +    F   ++++
Sbjct: 357 GANYEESAKLYDEYAQKSKSPQSYYNSANAYYKQQKYKEAIEAYNKAT----FDDESQRA 412

Query: 97  --LLMSAFVQYSAGKYQQAASLGEE 119
             L          G  Q+A    +E
Sbjct: 413 KKLSNLGNAYAKDGDLQKAIDSYKE 437


>gi|148262275|ref|YP_001228981.1| hypothetical protein Gura_0192 [Geobacter uraniireducens Rf4]
 gi|146395775|gb|ABQ24408.1| hypothetical protein Gura_0192 [Geobacter uraniireducens Rf4]
          Length = 150

 Score = 42.4 bits (99), Expect = 0.071,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 32/77 (41%), Gaps = 7/77 (9%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           +   ++  A    +E ++ Y +S       YL G+   +      +D +  K   +   +
Sbjct: 78  FDTEQFNDAILHLDEILSSYSKSAAAPEAVYLRGVCRFK----SSHDAKPLKEAYE---K 130

Query: 165 IVERYTNSPYVKGARFY 181
           +   Y +S +VK A+ Y
Sbjct: 131 LASDYPDSEWVKRAQPY 147


>gi|241826580|ref|XP_002414700.1| serine-threonine phosphatase 2A, catalytic subunit, putative
           [Ixodes scapularis]
 gi|215508912|gb|EEC18365.1| serine-threonine phosphatase 2A, catalytic subunit, putative
           [Ixodes scapularis]
          Length = 493

 Score = 42.4 bits (99), Expect = 0.072,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 45/155 (29%), Gaps = 25/155 (16%)

Query: 38  WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARK 95
              Q+  +    +  +        E+A  + K+Q F+ A + +++     P+       +
Sbjct: 12  CVHQNDSNSLKSTPEEEEQANRFKEEANEYFKKQEFNTAIDLYSKAIELDPYKAVYYGNR 71

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQR 153
           S     F       +  A S   + I       +  YV  YY    ++  +         
Sbjct: 72  S-----FAYLKTECFGYALSDASKAIEL-----DRSYVKGYYRRAAAHMSL--------G 113

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
             KL L+    + +   N      A          
Sbjct: 114 KFKLALKDFEAVTKARPNDK---DACAKYNECNKI 145


>gi|78224417|ref|YP_386164.1| peptidoglycan-binding LysM [Geobacter metallireducens GS-15]
 gi|78195672|gb|ABB33439.1| Peptidoglycan-binding LysM [Geobacter metallireducens GS-15]
          Length = 230

 Score = 42.4 bits (99), Expect = 0.072,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 28/68 (41%), Gaps = 2/68 (2%)

Query: 42  SSRDVYLDSVT--DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
           +S+ V     T      ++ ++EK V   K   + ++ + F++    +P + +A  + L 
Sbjct: 160 ASKAVSPSPATRKGGENEQTLFEKGVSAYKSGQYQQSLDAFDRFLARYPESPLAPDASLY 219

Query: 100 SAFVQYSA 107
            A      
Sbjct: 220 RADALMKM 227



 Score = 40.5 bits (94), Expect = 0.24,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV-YYL 136
            ++L       Y +G+YQQ+    + ++ +YPES        Y 
Sbjct: 177 EQTLFEKGVSAYKSGQYQQSLDAFDRFLARYPESPLAPDASLYR 220


>gi|70990982|ref|XP_750340.1| DnaJ and TPR domain protein [Aspergillus fumigatus Af293]
 gi|66847972|gb|EAL88302.1| DnaJ and TPR domain protein [Aspergillus fumigatus Af293]
 gi|159130814|gb|EDP55927.1| DnaJ and TPR domain protein [Aspergillus fumigatus A1163]
          Length = 693

 Score = 42.4 bits (99), Expect = 0.072,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 68/208 (32%), Gaps = 21/208 (10%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
               F K+ N+++A E F +     P + +    L   A    SA +Y +A    E  + 
Sbjct: 205 AGNKFFKDGNYNRAIEEFTKAIEINPSSSI---YLSNRAAAYLSANRYLEALEDAERALE 261

Query: 123 QYPESKNVDY--VYYLVGMSY-AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
             P++  + Y     L  +   ++ +  +   Q       +     ++R+        A 
Sbjct: 262 LDPDNSKIMYRLARILTALGRPSEALEVLSRVQPPASATDRAAPEKMQRFIKQAEETLAE 321

Query: 180 FY--------VTVGRNQLAA--KE-----VEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
                     +   R  L    KE     +      LK G   +      + ++   +  
Sbjct: 322 DRGVSMVLFCIEQARQLLGRGVKEPRKWTLLTAEAQLKMGSENSFRKAQDIAISMLRENN 381

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSL 252
              +A+     AY  L   ++A + + +
Sbjct: 382 QDPDALMIRARAYYGLGESEQALKTLKM 409


>gi|303242692|ref|ZP_07329165.1| Rhomboid family protein [Acetivibrio cellulolyticus CD2]
 gi|302589777|gb|EFL59552.1| Rhomboid family protein [Acetivibrio cellulolyticus CD2]
          Length = 524

 Score = 42.4 bits (99), Expect = 0.072,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 55/169 (32%), Gaps = 24/169 (14%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
           F       + +    G+    +RD Y++           Y++ V       + +A +   
Sbjct: 378 FIAATIIVVILGLYYGFNNSRNRDYYIERGK--------YKELVEMADSGKWKEAEKLGE 429

Query: 82  QCSRDFPFAGVARKSLL-MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
           +     P     + S L   A  + S GKY +A    E          +    YYL G+ 
Sbjct: 430 EIINMRPERNDIKLSTLYNIAAAEASQGKYDEALETAESVKKV-----DAPKGYYLRGLL 484

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
           Y         D +  +L  Q ++  V+      Y +    Y+     +L
Sbjct: 485 Y--------LDTKQYELARQELNEAVKLNP--EYKEEVDQYLKQIEEEL 523


>gi|296134354|ref|YP_003641601.1| Tetratricopeptide TPR_2 repeat protein [Thermincola sp. JR]
 gi|296032932|gb|ADG83700.1| Tetratricopeptide TPR_2 repeat protein [Thermincola potens JR]
          Length = 211

 Score = 42.4 bits (99), Expect = 0.073,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 55/175 (31%), Gaps = 31/175 (17%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
           L+   ++ Y  G YQ+A  +    +     +      ++ +G++Y ++        +   
Sbjct: 67  LVELGWLYYRKGDYQRAVEVLSRAVKLNRLNPA---AHFNLGLTYQEI--------KLLD 115

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                  + +E    S Y                     +G+ Y  + ++  A  +F+L 
Sbjct: 116 KAEAEFIKTLELDPESKYAY-----------------FALGKLYFSQEKWDEAAEQFKLA 158

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
                 +    E    L +AY       EA        +R P    AR     +K
Sbjct: 159 SQKDPVS---VENFFWLGQAYEKQGFRKEALAAYRKALDRVPNHTQAREAYYRLK 210


>gi|225849452|ref|YP_002729617.1| hypothetical protein SULAZ_1659 [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225643936|gb|ACN98986.1| TPR repeat protein [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 236

 Score = 42.4 bits (99), Expect = 0.073,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 60/154 (38%), Gaps = 25/154 (16%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           +    + VT  +  +++Y+ A+    + N  ++ + F +  + +P + +   ++  +   
Sbjct: 97  KREGKEEVTVPQNDKQLYQYALDLYFKGNIEESRKAFVEFLKKYPDSDLYGNAIFWAGQT 156

Query: 104 QYSAGKYQQAASLGEEYITQ-----------YPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
            Y+  KY+ A  +    I +           YP+          +G SY +M        
Sbjct: 157 FYAEKKYKDAIDVFNLLIQKCDEGKIKRCVKYPD------AMLKIGYSYIEM-------- 202

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
              +   +Y+  ++++Y ++     A+  +   R
Sbjct: 203 GDVEKGKKYLQDLIQKYPDTEPASLAKKKLEALR 236



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/114 (12%), Positives = 40/114 (35%), Gaps = 19/114 (16%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              +   +     +++Y +S     A                  G+ +    +Y  AI  
Sbjct: 124 GNIEESRKAFVEFLKKYPDSDLYGNAI--------------FWAGQTFYAEKKYKDAIDV 169

Query: 213 FQLVLAN-----YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           F L++               +AM ++  +Y+ +  +++ ++ +  + ++YP   
Sbjct: 170 FNLLIQKCDEGKIKRCVKYPDAMLKIGYSYIEMGDVEKGKKYLQDLIQKYPDTE 223


>gi|307155274|ref|YP_003890658.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822]
 gi|306985502|gb|ADN17383.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822]
          Length = 171

 Score = 42.4 bits (99), Expect = 0.073,   Method: Composition-based stats.
 Identities = 17/136 (12%), Positives = 43/136 (31%), Gaps = 8/136 (5%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
           S+    L      S++ +   + T+ R +  +  + +      ++  A E F +  R +P
Sbjct: 26  SLFSSHLPSGSGSSTQLISQAASTEDRLEDRL-VEGMDKGMLGDYQGAIEDFTEVIRLYP 84

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
            +    ++           G    A +   + +   P   N+   Y      Y+ + +  
Sbjct: 85  NSA---EAYYNRGIAYSKLGNSGAAMADYNKAVELNP---NLAEAYVDRAQIYSGLGKTS 138

Query: 149 PYDQRATKLMLQYMSR 164
               +  K       +
Sbjct: 139 DA-LKDLKRAADLFKQ 153


>gi|124002760|ref|ZP_01687612.1| tetratricopeptide repeat domain protein [Microscilla marina ATCC
           23134]
 gi|123991988|gb|EAY31375.1| tetratricopeptide repeat domain protein [Microscilla marina ATCC
           23134]
          Length = 658

 Score = 42.4 bits (99), Expect = 0.073,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 61/159 (38%), Gaps = 33/159 (20%)

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
            Y+ G+Y +A  L E+ +  Y  SK+  YV  L  ++       +   Q   K  ++   
Sbjct: 200 YYNQGRYGKAVKLYEKALKFYSTSKDKSYVINL--LTNLGA---LSLRQGQNKQAIKRFQ 254

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEV----------------------------E 195
            +++ Y  +   K A   + +G   L  KE                              
Sbjct: 255 EVLDYYRANDIKKRAYPLMNIGAAYLEEKEYTKSLQYFKKALAIETKANNKNGIIDILHN 314

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
           IG  Y K+ +Y  A+ +++ VL+   +++  + A+A + 
Sbjct: 315 IGVVYGKQEKYEQALIKYKKVLSMCGNSKQKDRALALIE 353


>gi|160895315|ref|ZP_02076086.1| hypothetical protein CLOL250_02874 [Clostridium sp. L2-50]
 gi|156863008|gb|EDO56439.1| hypothetical protein CLOL250_02874 [Clostridium sp. L2-50]
          Length = 469

 Score = 42.4 bits (99), Expect = 0.074,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 29/99 (29%), Gaps = 21/99 (21%)

Query: 90  AGVARKSLLMSAFV----------QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
           +   +KS    A             Y+  +Y +A +  ++ +     S + D   Y   +
Sbjct: 334 SEYEKKSKAELADADKVSMQLALKYYNDTQYDKAMTEFDKVLE---TSPDYDVALYYKAL 390

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            Y     +                  +++  +S Y   A
Sbjct: 391 CYLGTEDE--------DKAKTAFETFLDKCPDSIYYTVA 421



 Score = 36.2 bits (83), Expect = 5.5,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 33/98 (33%), Gaps = 7/98 (7%)

Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
           S Y K ++  +           +++   Y    +Y  A+  F  VL     +   + A+ 
Sbjct: 334 SEYEKKSKAELADADKV----SMQLALKYYNDTQYDKAMTEFDKVLE---TSPDYDVALY 386

Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
                Y+     D+A+       ++ P   +     +L
Sbjct: 387 YKALCYLGTEDEDKAKTAFETFLDKCPDSIYYTVAVSL 424


>gi|126730925|ref|ZP_01746734.1| TPR domain protein [Sagittula stellata E-37]
 gi|126708641|gb|EBA07698.1| TPR domain protein [Sagittula stellata E-37]
          Length = 173

 Score = 42.4 bits (99), Expect = 0.074,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 41/120 (34%), Gaps = 8/120 (6%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D+  D    +E+ ++ +      +  +A + F+      PF   A       AFV +   
Sbjct: 51  DNAPDEPS-QEMLDEGMRARAAFDMVRALKRFDALVNYCPF--YAE-GYNQRAFVNFIRQ 106

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
            Y  A    +  +   P             ++   + RD    Q A +  L+    +VER
Sbjct: 107 DYAAALPDLDRALELNPRHIG---ALSGRALTLIALGRD-DEGQAALRAALEINPWLVER 162


>gi|117920970|ref|YP_870162.1| hypothetical protein Shewana3_2529 [Shewanella sp. ANA-3]
 gi|117613302|gb|ABK48756.1| conserved hypothetical protein [Shewanella sp. ANA-3]
          Length = 250

 Score = 42.4 bits (99), Expect = 0.074,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 40/124 (32%), Gaps = 22/124 (17%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
              KY  A      +I QYP+S       Y +G                     Q  + +
Sbjct: 140 KERKYDDAIPAFRAFIKQYPDSVYAANANYWLGQLLFNKSEFA--------EAKQAFNTV 191

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           V R+++S     +   + +                 K G+   A   +Q V+ +Y+++  
Sbjct: 192 VTRFSDSNKRGDSLVKLGMIAE--------------KTGDKAGATQYYQQVVKDYANSAA 237

Query: 226 AEEA 229
           A  A
Sbjct: 238 ARIA 241



 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 46/131 (35%), Gaps = 17/131 (12%)

Query: 61  YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE- 118
           YE AV   LKE+ +  A   F    + +P +  A  +      + ++  ++ +A      
Sbjct: 131 YESAVNLVLKERKYDDAIPAFRAFIKQYPDSVYAANANYWLGQLLFNKSEFAEAKQAFNT 190

Query: 119 ---EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
               +        +         +    MI +   D+       QY  ++V+ Y NS   
Sbjct: 191 VVTRFSDSNKRGDS---------LVKLGMIAEKTGDKAG---ATQYYQQVVKDYANSAAA 238

Query: 176 KGARFYVTVGR 186
           + A+  +   +
Sbjct: 239 RIAQQQLAAIK 249


>gi|307720704|ref|YP_003891844.1| Tetratricopeptide TPR_2 repeat-containing protein [Sulfurimonas
           autotrophica DSM 16294]
 gi|306978797|gb|ADN08832.1| Tetratricopeptide TPR_2 repeat protein [Sulfurimonas autotrophica
           DSM 16294]
          Length = 304

 Score = 42.4 bits (99), Expect = 0.074,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 41/120 (34%), Gaps = 27/120 (22%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY-------SAGKYQ 111
           E+Y +A  +  ++ ++KA + + +  +               A+  Y           Y 
Sbjct: 189 ELYNQAKAYFDKKYYTKAIQDYKELIKR----------KYKPAYAHYMIGEMNFKRKNYA 238

Query: 112 QAASLGEEYITQYPESKNVDYVYYL-VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           QA S  ++  + Y      D   Y+   M +  +  D   D+   K        +V +Y 
Sbjct: 239 QAISYFKKSASLY------DKASYMPKLMLHTAIAMDKTGDKEHAKAFYNA---VVVKYP 289



 Score = 35.5 bits (81), Expect = 8.2,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 34/105 (32%), Gaps = 14/105 (13%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYI-TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           L   A   +    Y +A    +E I  +Y       Y +Y++G    +         +  
Sbjct: 190 LYNQAKAYFDKKYYTKAIQDYKELIKRKY----KPAYAHYMIGEMNFKR--------KNY 237

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
              + Y  +    Y  + Y+     +  +  ++   KE     +Y
Sbjct: 238 AQAISYFKKSASLYDKASYMPKLMLHTAIAMDKTGDKE-HAKAFY 281


>gi|254787333|ref|YP_003074762.1| tetratricopeptide protein [Teredinibacter turnerae T7901]
 gi|237684155|gb|ACR11419.1| tetratricopeptide protein [Teredinibacter turnerae T7901]
          Length = 254

 Score = 42.4 bits (99), Expect = 0.074,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 39/98 (39%), Gaps = 3/98 (3%)

Query: 55  RYQREV--YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
               E+  Y  A+   LK+QN+  A     +  +++P    A  +L     +    G+ +
Sbjct: 128 SPADELKSYRAAIDLVLKQQNYDAAVVKLKEHLQNYPKGRYAGNALYWLGEIYLLKGELE 187

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
            +     + ++++P+   V    + +G  +  M  D  
Sbjct: 188 TSRQWFSQLLSEFPDHPKVADAQFKLGKVHHLMGDDAQ 225



 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 29/59 (49%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           LK+  Y AA+ + +  L NY    +A  A+  L E Y+    ++ +R+  S +   +P 
Sbjct: 144 LKQQNYDAAVVKLKEHLQNYPKGRYAGNALYWLGEIYLLKGELETSRQWFSQLLSEFPD 202



 Score = 35.5 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 15/113 (13%), Positives = 40/113 (35%), Gaps = 14/113 (12%)

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           +   +   D+   Q+     +  +   ++ Y    Y   A +++      L   E+E  R
Sbjct: 133 LKSYRAAIDLVLKQQNYDAAVVKLKEHLQNYPKGRYAGNALYWLGEIY--LLKGELETSR 190

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
            +            F  +L+ + D     +A  +L + +  +    +A+ ++ 
Sbjct: 191 QW------------FSQLLSEFPDHPKVADAQFKLGKVHHLMGDDAQAKTLLE 231


>gi|327286751|ref|XP_003228093.1| PREDICTED: serine/threonine-protein phosphatase 5-like [Anolis
           carolinensis]
          Length = 475

 Score = 42.4 bits (99), Expect = 0.075,   Method: Composition-based stats.
 Identities = 23/148 (15%), Positives = 43/148 (29%), Gaps = 31/148 (20%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF----VQ-YSA 107
                +  +A  + K +++  A +Y+ Q     P        +S    A+       Y+ 
Sbjct: 2   ERAESLKTQANDYFKAKDYENAVKYYTQAIELNPTNAIYYGNRS---LAYLRTECYGYAL 58

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
               +A  L ++YI            YY    S   +           K  L+    +V+
Sbjct: 59  ADATKAIELDKKYIK----------GYYRRATSNMAL--------GKFKAALRDYETVVK 100

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVE 195
              N      A+         +  K  E
Sbjct: 101 VKPNDK---DAKMKYQECNKIVKQKAFE 125


>gi|323345328|ref|ZP_08085551.1| hypothetical protein HMPREF0663_12087 [Prevotella oralis ATCC
           33269]
 gi|323093442|gb|EFZ36020.1| hypothetical protein HMPREF0663_12087 [Prevotella oralis ATCC
           33269]
          Length = 869

 Score = 42.4 bits (99), Expect = 0.075,   Method: Composition-based stats.
 Identities = 11/69 (15%), Positives = 23/69 (33%), Gaps = 4/69 (5%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           E A    ++ N+ +A + + +  +     GV+           +      QA    E   
Sbjct: 645 ENADTEYRKGNYQQAIKDYEELLKQ----GVSADLYYNLGNAYFRTNNITQAVLAYERAY 700

Query: 122 TQYPESKNV 130
              P  K++
Sbjct: 701 VLSPGDKDI 709


>gi|228473745|ref|ZP_04058490.1| tetratricopeptide repeat-containing domain protein [Capnocytophaga
           gingivalis ATCC 33624]
 gi|228274766|gb|EEK13589.1| tetratricopeptide repeat-containing domain protein [Capnocytophaga
           gingivalis ATCC 33624]
          Length = 271

 Score = 42.4 bits (99), Expect = 0.075,   Method: Composition-based stats.
 Identities = 22/144 (15%), Positives = 51/144 (35%), Gaps = 10/144 (6%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
           V  D  +        Y   + +L+   + +A  + ++ S + P   ++  +L        
Sbjct: 136 VIKDYSSSKAANVAYYSAGMAYLQLNKYKEAVTHLDKFSSEDP--ILSALALGNIGDAFV 193

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
           +  + ++A    ++ I    +S N      L    Y      V  +Q+  K  L+Y+ +I
Sbjct: 194 ALKQPKEAMDYYKKAID---KSDNT-----LTAPIYMNKAALVAEEQKNYKEALEYLEKI 245

Query: 166 VERYTNSPYVKGARFYVTVGRNQL 189
              Y  S         ++  +  +
Sbjct: 246 KNDYPKSQEATSVDMQISRVKTLM 269


>gi|195055729|ref|XP_001994765.1| GH17416 [Drosophila grimshawi]
 gi|193892528|gb|EDV91394.1| GH17416 [Drosophila grimshawi]
          Length = 515

 Score = 42.4 bits (99), Expect = 0.075,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 44/149 (29%), Gaps = 25/149 (16%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLL 98
             +  V      D     +   K    LK + FSKA + +++    +P +    A ++L 
Sbjct: 28  TKNDSVPEAGQQDFAAAEQCKNKGNDLLKTKEFSKAIDMYSKAIELYPSSAIYYANRAL- 86

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATK 156
                      +  A   G   +   P      Y+  YY    ++  +           K
Sbjct: 87  ----AHLRQENFGLALQDGVSAVKTDPS-----YLKGYYRRAAAHMSL--------GKFK 129

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           L L     + +   N      A+   T  
Sbjct: 130 LALSDFEYVAKCRPNDK---DAKLKFTEC 155


>gi|156844451|ref|XP_001645288.1| hypothetical protein Kpol_1037p26 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156115948|gb|EDO17430.1| hypothetical protein Kpol_1037p26 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 342

 Score = 42.4 bits (99), Expect = 0.075,   Method: Composition-based stats.
 Identities = 15/125 (12%), Positives = 36/125 (28%), Gaps = 18/125 (14%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF 102
           +V  D          +  +    +  +++  A + + +     P      A ++      
Sbjct: 88  NVTEDDTEASEAAEALKLEGNKAMAGKDYELAIKKYTEAIATLPTNAVYFANRAA----- 142

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
              S  KY +A       I   P         Y  G      +    + Q   +  L+  
Sbjct: 143 AYSSLKKYDEAVEDANSAIKINPT--------YSKG---YSRLGFAKFAQGKAEDALEAY 191

Query: 163 SRIVE 167
            ++++
Sbjct: 192 KKVLD 196


>gi|124024718|ref|YP_001013834.1| TPR-repeat pilus assembly protein TadD [Prochlorococcus marinus
           str. NATL1A]
 gi|123959786|gb|ABM74569.1| Flp pilus assembly protein TadD, contains TPR repeats
           [Prochlorococcus marinus str. NATL1A]
          Length = 276

 Score = 42.4 bits (99), Expect = 0.075,   Method: Composition-based stats.
 Identities = 13/129 (10%), Positives = 40/129 (31%), Gaps = 10/129 (7%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           +++K+ L +                 R    +        +++ + A   ++   + +A 
Sbjct: 7   KIFKYLLGLSLINNFFIPNSSVAFFPRINEPNQQEFESTSKQIGKTAKQLIQFGEYKEAI 66

Query: 78  EYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           +      +  P              A  Q+ +     A    ++ +   P++ ++   Y+
Sbjct: 67  KILKLALKLNPTEETLWTT-----LADAQFKSKDSNNALLSLDKVLVINPKNASI---YF 118

Query: 136 LVGMSYAQM 144
             G  Y  +
Sbjct: 119 AKGSIYMNL 127


>gi|148656866|ref|YP_001277071.1| hypothetical protein RoseRS_2749 [Roseiflexus sp. RS-1]
 gi|148568976|gb|ABQ91121.1| Tetratricopeptide TPR_2 repeat protein [Roseiflexus sp. RS-1]
          Length = 615

 Score = 42.4 bits (99), Expect = 0.075,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 41/120 (34%), Gaps = 8/120 (6%)

Query: 41  QSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
           QS+ D +  ++       E Y ++A  F +   +  A   F +     P   V    L+ 
Sbjct: 378 QSAIDDFTKALALDPDNVEAYHQRARAFYRLNQYDAAIRDFTEALERDPNNDV---ILMR 434

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
                    +Y +A +  ++ +   P   +V + YY   +   Q    +   +      L
Sbjct: 435 RGVAYRDNRQYDEALADFDQSLQLNP---DVSFTYYHRAL-LFQATGKLDRARADFDRAL 490



 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 19/145 (13%), Positives = 38/145 (26%), Gaps = 26/145 (17%)

Query: 33  CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA-- 90
              +G   Q++         D       + +A +      F  A + F +     P    
Sbjct: 337 LAAIGSLGQAAERYTEAIRADPSSFEAYFGRAQVNFNLSLFQSAIDDFTKALALDPDNVE 396

Query: 91  GVARKSLLMSAFVQYSAGKYQQAA----SLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
              +++        Y   +Y  A        E          N D +    G++Y     
Sbjct: 397 AYHQRAR-----AFYRLNQYDAAIRDFTEALER-------DPNNDVILMRRGVAY----- 439

Query: 147 DVPYDQRATKLMLQYMSRIVERYTN 171
               D R     L    + ++   +
Sbjct: 440 ---RDNRQYDEALADFDQSLQLNPD 461


>gi|153809210|ref|ZP_01961878.1| hypothetical protein BACCAC_03521 [Bacteroides caccae ATCC 43185]
 gi|149128186|gb|EDM19406.1| hypothetical protein BACCAC_03521 [Bacteroides caccae ATCC 43185]
          Length = 596

 Score = 42.4 bits (99), Expect = 0.076,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 61/198 (30%), Gaps = 36/198 (18%)

Query: 61  YEKAVLFL--KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           Y + ++ L  ++    KA     +    FP     +  L     +     KY    S   
Sbjct: 128 YSQGLVSLYQQQNELDKAVTLLEEMVTRFPT---KQDPLFNLLDIYGRQEKYSDVISTLN 184

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
               +  +++ +    + +   Y QM  D        K   Q +  +V  Y        A
Sbjct: 185 RLEKRLGKNEQLSMEKFRI---YLQMKDD--------KKAFQEIESLVNEYP-------A 226

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
                         +V +G  YL+ G+   A   +Q VL+   D      A+  +   Y 
Sbjct: 227 DMR----------YQVILGDVYLQNGKKEEAYEAYQKVLSVEPD---NPMALFSMASYYE 273

Query: 239 ALALMDEAREVVSLIQER 256
                +  ++ +  +   
Sbjct: 274 QTGQKELYQQQLDTLLLN 291


>gi|320586169|gb|EFW98848.1| transcriptional corepressor [Grosmannia clavigera kw1407]
          Length = 870

 Score = 42.0 bits (98), Expect = 0.077,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 44/140 (31%), Gaps = 22/140 (15%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSA 107
             D    +  Y     ++ +Q + KAYE + Q        P              + Y  
Sbjct: 281 AADNNDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYREGRNP-TFWC-----SIGVLYYQI 334

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +Y+ A       I   P    +  V+Y +G  Y      +          L    R  E
Sbjct: 335 NQYRDALDAYSRAIRLNP---FISEVWYDLGTLYESCNNQIS-------DALDAYQRAAE 384

Query: 168 RYTNSPYVKGARFYVTVGRN 187
              N+P++   +  + + RN
Sbjct: 385 LDPNNPHI---KARLQLLRN 401


>gi|294140563|ref|YP_003556541.1| hypothetical protein SVI_1792 [Shewanella violacea DSS12]
 gi|293327032|dbj|BAJ01763.1| conserved hypothetical protein [Shewanella violacea DSS12]
          Length = 246

 Score = 42.0 bits (98), Expect = 0.077,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 39/124 (31%), Gaps = 22/124 (17%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
              KY +A      +I +YP+S       Y +G                 +   +    +
Sbjct: 138 KQRKYDEAIPAFRGFIKKYPDSTYAANANYWLGQLLYNK--------SEFESAKKAFDTV 189

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           V R+ +S     +   + +                 K G   AA   +Q V+  Y+++  
Sbjct: 190 VNRFKDSNKRADSLVKLGMIAE--------------KVGTVSAAKVYYQQVIKEYANSAA 235

Query: 226 AEEA 229
           +  A
Sbjct: 236 SRLA 239


>gi|21232652|ref|NP_638569.1| hypothetical protein XCC3223 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66767264|ref|YP_242026.1| hypothetical protein XC_0932 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|21114458|gb|AAM42493.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66572596|gb|AAY48006.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 604

 Score = 42.0 bits (98), Expect = 0.077,   Method: Composition-based stats.
 Identities = 17/117 (14%), Positives = 36/117 (30%), Gaps = 9/117 (7%)

Query: 11  IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLD-SVTDVRYQREVYEKAVLFLK 69
           +F   A  L  F       +     VG   Q ++           + Q++  +  V   +
Sbjct: 312 LFPVMALALLAFRRRAAVMVLALLCVGPFVQPAQAAEGTLWQRADQVQQQRLDAGVQAYR 371

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
           + +F+ A + F              +            G+Y  A +  +  + Q P+
Sbjct: 372 KGDFAAAQKAFEAVP--------TDQGWYNLGNALARQGRYDDAIAAYDRALRQQPQ 420


>gi|119628672|gb|EAX08267.1| intraflagellar transport 88 homolog (Chlamydomonas), isoform CRA_b
           [Homo sapiens]
          Length = 795

 Score = 42.0 bits (98), Expect = 0.077,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 76/238 (31%), Gaps = 22/238 (9%)

Query: 2   SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60
                +A+ I +    +  +       +++  + +G +  Q+S    +   +D      +
Sbjct: 437 QKDYNQAVEILKVLEKKDNRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 496

Query: 61  YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
             K        ++ KA E++      D   +     +L           +  +A      
Sbjct: 497 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 549

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           ++  +   +N   V Y +   Y  M              ++++ ++V      P      
Sbjct: 550 FLKLHAILRNSAEVLYQIANIYELM--------ENPSQAIEWLMQVVSVIPTDP---QVL 598

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAA-IPRFQLVLANYSDAEHAEEAMARLVEA 236
             +    ++   K  +  +YY +   Y    I   + + A Y D +  E+A+     A
Sbjct: 599 SKLGELYDREGDKS-QAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERA 655



 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 65/222 (29%), Gaps = 67/222 (30%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117
            KAV +L+++++++A E      +      V   +    + + Y    + QA+S      
Sbjct: 429 NKAVTYLRQKDYNQAVEILKVLEKKD--NRVKSAAATNLSALYYMGKDFAQASSYADIAV 486

Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147
             + Y    P    +K      N DY                     Y +G++Y ++ R 
Sbjct: 487 NSDRY---NPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNR- 542

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
                      L    ++     NS                 A    +I   Y       
Sbjct: 543 -------LDEALDCFLKLHAILRNS-----------------AEVLYQIANIYELMENPS 578

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
            AI     V++           +++L E Y       +A + 
Sbjct: 579 QAIEWLMQVVSVIPTDPQV---LSKLGELYDREGDKSQAFQY 617


>gi|268589508|ref|ZP_06123729.1| tetratricopeptide repeat protein [Providencia rettgeri DSM 1131]
 gi|291315177|gb|EFE55630.1| tetratricopeptide repeat protein [Providencia rettgeri DSM 1131]
          Length = 390

 Score = 42.0 bits (98), Expect = 0.078,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 57/188 (30%), Gaps = 28/188 (14%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              ++    + +A   F Q + +  F   A +SLL           + +A     + +  
Sbjct: 115 GRDYMAAGVYDRAENMFQQLTDEVDFKQSALQSLLNI---YQLTSDWTKAIETAGKLVKL 171

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
                 +            + I     +    +L    +   +       ++  A     
Sbjct: 172 --GHTEL-----------REQIAHFYCELATQQLASDDLEDAL------IFLNKAEQ--- 209

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
              N  A   +  GR ++++G Y  AI   + V     D E   E +  L + Y      
Sbjct: 210 -ADNHCARVSIMKGRLFIEQGNYDKAIHVLKQVYE--QDRELVAETLPLLFDCYQHTGQA 266

Query: 244 DEAREVVS 251
           DE  + + 
Sbjct: 267 DEWEDYLR 274


>gi|198437128|ref|XP_002129989.1| PREDICTED: similar to ring finger protein 127 isoform 2 [Ciona
           intestinalis]
          Length = 758

 Score = 42.0 bits (98), Expect = 0.078,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 46/147 (31%), Gaps = 23/147 (15%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
           V+     +    R +  + +  L +Q + KA E FN+     P +     + L  A   +
Sbjct: 174 VFESWHKNEWQGRALTTEGIALLCKQEYKKAIEKFNKALELVPQSH---SAFLHRAKANF 230

Query: 106 SAGKYQQAASLGEEYITQYPES---KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
           S G Y+ A             S         YY+ G    Q+           +  L Y 
Sbjct: 231 SLGNYEAALRDATR------ASVVAHKSPEAYYVKGEILYQLD--------YVEEALFYF 276

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQL 189
             ++    +S   K A+         L
Sbjct: 277 --LICVLLDSS-RKDAKKRTHEIITTL 300


>gi|198437126|ref|XP_002129971.1| PREDICTED: similar to ring finger protein 127 isoform 1 [Ciona
           intestinalis]
          Length = 768

 Score = 42.0 bits (98), Expect = 0.078,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 46/147 (31%), Gaps = 23/147 (15%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
           V+     +    R +  + +  L +Q + KA E FN+     P +     + L  A   +
Sbjct: 174 VFESWHKNEWQGRALTTEGIALLCKQEYKKAIEKFNKALELVPQSH---SAFLHRAKANF 230

Query: 106 SAGKYQQAASLGEEYITQYPES---KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
           S G Y+ A             S         YY+ G    Q+           +  L Y 
Sbjct: 231 SLGNYEAALRDATR------ASVVAHKSPEAYYVKGEILYQLD--------YVEEALFYF 276

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQL 189
             ++    +S   K A+         L
Sbjct: 277 --LICVLLDSS-RKDAKKRTHEIITTL 300


>gi|254411497|ref|ZP_05025274.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC
           7420]
 gi|196181998|gb|EDX76985.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC
           7420]
          Length = 703

 Score = 42.0 bits (98), Expect = 0.078,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 74/252 (29%), Gaps = 45/252 (17%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L +   IA+  + G    +   V + +  +     + Y +    L+ + +  A   +N+ 
Sbjct: 302 LIVVLLIAMAVIAGGGGAT---VAIINWINSTNATQSYNRGETLLELRRYEDALSAYNRA 358

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ---YPESKNVDYVYYLVGMS 140
               P    A  + L       + G+ + A    ++ I     YPE       +   G +
Sbjct: 359 VELQP--DYAE-AWLGQGDALLALGQSEAALDAYDQAIQIQREYPE------AWKGRGEA 409

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
            A + R         +  +    ++ +           R  V                  
Sbjct: 410 LAALQR--------YEAAISAFDQVTKLQPEDVETWERRGMVQ----------------- 444

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           +K   Y AAI  +   L    +      A  R   A   L   +EA +      E  P  
Sbjct: 445 MKLQRYSAAIASYDKALEIQPNYSS---AWYRRGWALHNLQQYEEAIKSYDKAVEHKPDS 501

Query: 261 --YWARYVETLV 270
             YW +     V
Sbjct: 502 AEYWYQRGNAFV 513



 Score = 38.6 bits (89), Expect = 0.95,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 35/101 (34%), Gaps = 10/101 (9%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +  +      + +A   F Q  +  P +    ++    A+  +   +Y +A    E+ 
Sbjct: 540 YSQGSILNNLNQYQEALAAFEQAVKLQPNSY---EAWYGRAWALHQLQRYDEALMAYEKA 596

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVP----YDQRATKL 157
           +   P S+     +Y  G  +  + +       YDQ     
Sbjct: 597 VKLRPNSEQ---AWYNRGNVFYTLEQYQDAIAAYDQAVAHK 634


>gi|195336539|ref|XP_002034893.1| GM14398 [Drosophila sechellia]
 gi|194127986|gb|EDW50029.1| GM14398 [Drosophila sechellia]
          Length = 1152

 Score = 42.0 bits (98), Expect = 0.078,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 53/141 (37%), Gaps = 24/141 (17%)

Query: 133 VYYLVGMSYAQM------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------R 179
            Y L+ +    +       RD   +++  +  L    +++     + +           +
Sbjct: 601 AYSLIALGNFSLQTLHQPSRDKEKERKHQEKALAIFKQVLRNDPRNIWATNGIGAVLAHK 660

Query: 180 FYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
             V   R+  A  +E         + I   Y+++ +Y++AI  ++  +  +    +  E 
Sbjct: 661 GCVIEARDIFAQVREATADFCDVWLNIAHVYVEQKQYISAIQMYENCMKKFYKHNNV-EV 719

Query: 230 MARLVEAYVALALMDEAREVV 250
           M  L  AY+    + +A+ V+
Sbjct: 720 MQYLARAYLRANKLVDAKAVL 740


>gi|28574254|ref|NP_788449.1| CG2469, isoform B [Drosophila melanogaster]
 gi|28574256|ref|NP_788448.1| CG2469, isoform A [Drosophila melanogaster]
 gi|7292059|gb|AAF47472.1| CG2469, isoform B [Drosophila melanogaster]
 gi|17862386|gb|AAL39670.1| LD24034p [Drosophila melanogaster]
 gi|23092752|gb|AAN11469.1| CG2469, isoform A [Drosophila melanogaster]
 gi|220947488|gb|ACL86287.1| CG2469-PA [synthetic construct]
          Length = 1150

 Score = 42.0 bits (98), Expect = 0.078,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 53/141 (37%), Gaps = 24/141 (17%)

Query: 133 VYYLVGMSYAQM------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------R 179
            Y L+ +    +       RD   +++  +  L    +++     + +           +
Sbjct: 601 AYSLIALGNFSLQTLHQPSRDKEKERKHQEKALAIFKQVLRNDPRNIWATNGIGAVLAHK 660

Query: 180 FYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
             V   R+  A  +E         + I   Y+++ +Y++AI  ++  +  +    +  E 
Sbjct: 661 GCVIEARDIFAQVREATADFCDVWLNIAHVYVEQKQYISAIQMYENCMKKFYKHNNV-EV 719

Query: 230 MARLVEAYVALALMDEAREVV 250
           M  L  AY+    + +A+ V+
Sbjct: 720 MQYLARAYLRANKLVDAKAVL 740


>gi|284098534|ref|ZP_06385920.1| hypothetical protein POR_0516 [Candidatus Poribacteria sp. WGA-A3]
 gi|283830472|gb|EFC34663.1| hypothetical protein POR_0516 [Candidatus Poribacteria sp. WGA-A3]
          Length = 439

 Score = 42.0 bits (98), Expect = 0.079,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 32/97 (32%), Gaps = 8/97 (8%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           A K  L  A   +    Y  A  L   ++  +P+S       + +  +Y +         
Sbjct: 10  AEKRSLDQAEHAFLRADYATAVVLLNRFLRTHPQSSLSPEARWWLARAYQKT-------- 61

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
                 L++   + +    + Y   ARF  T    +L
Sbjct: 62  GNPSSALEHFRFVAKTRRWNMYQTDARFRATQLEERL 98



 Score = 38.9 bits (90), Expect = 0.71,   Method: Composition-based stats.
 Identities = 8/60 (13%), Positives = 21/60 (35%), Gaps = 1/60 (1%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++A       +++ A    N+  R  P + ++ ++    A      G    A      ++
Sbjct: 16  DQAEHAFLRADYATAVVLLNRFLRTHPQSSLSPEARWWLARAYQKTGNPSSALEHF-RFV 74


>gi|254569172|ref|XP_002491696.1| General transcriptional co-repressor, acts together with Tup1p
           [Pichia pastoris GS115]
 gi|238031493|emb|CAY69416.1| General transcriptional co-repressor, acts together with Tup1p
           [Pichia pastoris GS115]
 gi|328351799|emb|CCA38198.1| General transcriptional corepressor CYC8 [Pichia pastoris CBS 7435]
          Length = 807

 Score = 42.0 bits (98), Expect = 0.079,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 41/137 (29%), Gaps = 25/137 (18%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGK 109
           D    +  Y+   + +   +++ AY+ + Q        P              + Y   +
Sbjct: 303 DNSDAQTWYQLGRVHMSRGDYTSAYDAYQQAVNRDARNP-TFWC-----SIGVLYYQISQ 356

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSY---AQMIRDVPYDQRATKLMLQYMSRIV 166
           Y+ A       I   P    +  V+Y +G  Y      I D           L    +  
Sbjct: 357 YRDALDAYTRAIRLNP---YISEVWYDLGTLYETCNNQISD----------ALDAYKQAA 403

Query: 167 ERYTNSPYVKGARFYVT 183
               N+P+++     + 
Sbjct: 404 TLDPNNPHIQERLNQLI 420


>gi|86607598|ref|YP_476360.1| Slt family transglycosylase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86556140|gb|ABD01097.1| transglycosylase, SLT family [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 711

 Score = 42.0 bits (98), Expect = 0.079,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 65/229 (28%), Gaps = 29/229 (12%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG---VARKSLLMSAFVQY 105
           D     +     + +A   L+      A +         P         ++    A+ Q 
Sbjct: 51  DPTQLPQTSTTAFLRAYAALQAGQAQSALKDLQGLEESLPVLREEIWKLRAQ---AYEQL 107

Query: 106 SAGKYQQAA--SLGEEYITQYPESKNVDYVYYLVGMSY--AQMIRDVPYDQRATK----- 156
              +  Q          + +YP S    Y  + +G      Q     P   RA K     
Sbjct: 108 QDKETAQGIWWPQI---LQEYPHSPVAAYALWGMGQVDRLRQQFPTHPLTGRALKHLLEL 164

Query: 157 --LMLQYMSRIVERYTNSPYVKGARFYVTVGRN-QLAAKEVEI-GRYYLKRGEYVAAIPR 212
                  +  + + +  +P +          +   L A + +I    Y ++ EY  A   
Sbjct: 165 NPDRYDLLRDLAQHHPQTPGLTPLLDRWRQAQEGSLTASDWQILADAYWEQREYGKAA-- 222

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
                  Y  A    + + R   ++       +A+     +  ++P G 
Sbjct: 223 -----RAYGRAPATSQNLYRWGRSHQISREFPQAKAAYQALLAQFPDGP 266


>gi|291566860|dbj|BAI89132.1| TPR domain protein [Arthrospira platensis NIES-39]
          Length = 340

 Score = 42.0 bits (98), Expect = 0.080,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 77/209 (36%), Gaps = 41/209 (19%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARK-SLLMSAFVQYSAGKYQQAASLG 117
           Y +         + +A   +++ ++  P F      + +LLMS       G++++A    
Sbjct: 129 YGRGNALSSLSQYDEAIASYDRATQLQPNFHPAWRDRGALLMSI------GRHEEALQAF 182

Query: 118 EEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV- 175
           +  +   P+    DY ++YL G      + D P          +  +R +    +     
Sbjct: 183 DRLLQIQPD----DYGIWYLRGNILMNHLDDYP-------EAAKSYTRAINIKPDFTPAL 231

Query: 176 ---KGARFYVTVGRNQLA-----------AKEVEI--GRYYLKRGEYVAAIPRFQLVLAN 219
                A F +      +A            +E  +  G+ +++   Y  A+  +   +  
Sbjct: 232 TAQAQALFRLGDYGEAIASVDESLHHNPHQREAWVLRGQIFMEIKRYAQALNAYNRAI-- 289

Query: 220 YSDAEHAEEAMARLVEAYVALALMDEARE 248
           Y D+ H++  + + + AY+      EA++
Sbjct: 290 YLDSNHSQSWLGKAI-AYLRQGRDQEAKD 317


>gi|282891454|ref|ZP_06299949.1| hypothetical protein pah_c173o008 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498637|gb|EFB40961.1| hypothetical protein pah_c173o008 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 675

 Score = 42.0 bits (98), Expect = 0.080,   Method: Composition-based stats.
 Identities = 10/70 (14%), Positives = 29/70 (41%), Gaps = 3/70 (4%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
             +Y   +  L+ ++F  A +   +     P + +  ++LL      +   + ++  ++ 
Sbjct: 142 EGLYNLGIGMLRLKDFDAAEQLLRKVISQAP-SHL--EALLNLGICLFQIHRNEEVVAIC 198

Query: 118 EEYITQYPES 127
           E  +T +P  
Sbjct: 199 ERILTIHPNH 208


>gi|154252571|ref|YP_001413395.1| Tol-Pal system YbgF [Parvibaculum lavamentivorans DS-1]
 gi|154156521|gb|ABS63738.1| Tol-Pal system YbgF [Parvibaculum lavamentivorans DS-1]
          Length = 301

 Score = 42.0 bits (98), Expect = 0.080,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 43/137 (31%), Gaps = 14/137 (10%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           SV      +  Y+ A+  +K   + +A   F +  +  P   +A  +        Y+   
Sbjct: 170 SVLPSGTPQTQYDFAIDLMKRGQYPQARTAFLEFLQLHPKHELAGNAQYWLGETYYAENN 229

Query: 110 YQQAASLGEEYIT---QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
           Y+QA      ++     Y  S         +GMS + +          T         + 
Sbjct: 230 YKQAGDA---FLNGYTTYASSSKAPDSLLKLGMSLSAL--------GNTDAACTVWGELG 278

Query: 167 ERYTNSPYVKGARFYVT 183
            R+  +     AR  + 
Sbjct: 279 SRFPQASPSIVARAKLE 295



 Score = 40.1 bits (93), Expect = 0.37,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 33/105 (31%), Gaps = 14/105 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                    ++ +        A++++              G  Y     Y  A   F   
Sbjct: 195 QARTAFLEFLQLHPKHELAGNAQYWL--------------GETYYAENNYKQAGDAFLNG 240

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
              Y+ +  A +++ +L  +  AL   D A  V   +  R+PQ  
Sbjct: 241 YTTYASSSKAPDSLLKLGMSLSALGNTDAACTVWGELGSRFPQAS 285


>gi|300865159|ref|ZP_07109983.1| hypothetical protein OSCI_1490019 [Oscillatoria sp. PCC 6506]
 gi|300336849|emb|CBN55133.1| hypothetical protein OSCI_1490019 [Oscillatoria sp. PCC 6506]
          Length = 1093

 Score = 42.0 bits (98), Expect = 0.081,   Method: Composition-based stats.
 Identities = 21/185 (11%), Positives = 60/185 (32%), Gaps = 22/185 (11%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
                ++Q + ++   F +     P  F        +         G+  +A +      
Sbjct: 75  GDALAQQQEWEESIAAFRKAIELNPEHFGSY-----VGLGNSLAKLGQLDEAIAAYRRAS 129

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              P+++ + Y      +                   +    +++E   ++     A   
Sbjct: 130 ELNPDAEWIHYAL-AKAL--------QQRTHSDVVEAIASYRQMIELNPDN---VEAYQN 177

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
           +   ++      +++G   +++G+   AI  ++ ++ +     H + A   L E    L 
Sbjct: 178 LLQLQSDNWELWLQLGNTLVQQGKLEEAIAAYRRLIEHNP---HNQTAYYGLGECLAKLG 234

Query: 242 LMDEA 246
            ++EA
Sbjct: 235 QLEEA 239


>gi|153214277|ref|ZP_01949294.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|124115425|gb|EAY34245.1| conserved hypothetical protein [Vibrio cholerae 1587]
          Length = 254

 Score = 42.0 bits (98), Expect = 0.081,   Method: Composition-based stats.
 Identities = 20/152 (13%), Positives = 58/152 (38%), Gaps = 10/152 (6%)

Query: 33  CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAG 91
             +      S+ +    + +    ++  Y+ AV   LK+++++ A   F +   D+P + 
Sbjct: 112 AGVGQLPTSSNDEAAQGTFSSNANEQAAYQNAVDLILKKRDYAGAIAAFQKFQTDYPNST 171

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
            +  +      + ++  + ++AA      ++    +K  D       +     + D+   
Sbjct: 172 FSANAHYWLGQLYFAKKEDKEAAKSFAAVVSDKGSNKRAD------ALV---KLGDIAKR 222

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
               +   ++  + V+ Y +S   K A+  + 
Sbjct: 223 NNNAEQARKFYQQAVDEYPDSASAKIAKENLK 254



 Score = 38.9 bits (90), Expect = 0.67,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 46/130 (35%), Gaps = 15/130 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            Q   D+   +R     +    +    Y NS +   A +++              G+ Y 
Sbjct: 140 YQNAVDLILKKRDYAGAIAAFQKFQTDYPNSTFSANAHYWL--------------GQLYF 185

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + E   A   F  V+++   +    +A+ +L +        ++AR+      + YP   
Sbjct: 186 AKKEDKEAAKSFAAVVSD-KGSNKRADALVKLGDIAKRNNNAEQARKFYQQAVDEYPDSA 244

Query: 262 WARYVETLVK 271
            A+  +  +K
Sbjct: 245 SAKIAKENLK 254



 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 39/126 (30%), Gaps = 27/126 (21%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               Y  A +  +++ T YP S      +Y +G  Y     D        K   +  + +
Sbjct: 149 KKRDYAGAIAAFQKFQTDYPNSTFSANAHYWLGQLYFAKKED--------KEAAKSFAAV 200

Query: 166 VERYTNSPYVKGARFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
           V    ++     A   +     RN  A +                A   +Q  +  Y D+
Sbjct: 201 VSDKGSNKRA-DALVKLGDIAKRNNNAEQ----------------ARKFYQQAVDEYPDS 243

Query: 224 EHAEEA 229
             A+ A
Sbjct: 244 ASAKIA 249


>gi|119498417|ref|XP_001265966.1| serine/threonine protein phosphatase PPT1 [Neosartorya fischeri
           NRRL 181]
 gi|119414130|gb|EAW24069.1| serine/threonine protein phosphatase PPT1 [Neosartorya fischeri
           NRRL 181]
          Length = 478

 Score = 42.0 bits (98), Expect = 0.081,   Method: Composition-based stats.
 Identities = 16/149 (10%), Positives = 46/149 (30%), Gaps = 27/149 (18%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF---PFAGVARKSLLMSAFVQYSAG 108
           +D+     +  +      E  +  A +++ Q    +   P +  + ++            
Sbjct: 4   SDLEAATALKVQGNKAFAEHEWPTAVDFYTQAIDKYDREP-SFFSNRAQ-----AYIKLE 57

Query: 109 KYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
            Y  A +   + +   P      Y   Y+   ++   ++          +  L+    +V
Sbjct: 58  AYGFAIADATKALELDPS-----YVKAYWRRALANTAILN--------YREALKDFKTVV 104

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           ++  N+     A+  +      +   E E
Sbjct: 105 KKEPNNR---DAKLKLAECEKLVRRLEFE 130


>gi|90082525|dbj|BAE90444.1| unnamed protein product [Macaca fascicularis]
          Length = 499

 Score = 42.0 bits (98), Expect = 0.081,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 47/148 (31%), Gaps = 31/148 (20%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF----VQ-YSA 107
           +   E+  +A  + K +++  A ++++Q     P        +S    A+       Y+ 
Sbjct: 26  KRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS---LAYLRTECYGYAL 82

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           G   +A  L ++YI            YY    S   +           +  L+    +V+
Sbjct: 83  GDATRAIELDKKYIK----------GYYRRAASNMAL--------GKFRAALRDYETVVK 124

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVE 195
              +      A+         +  K  E
Sbjct: 125 VKPHDK---DAKMKYQECNKIVKQKAFE 149


>gi|71022837|ref|XP_761648.1| hypothetical protein UM05501.1 [Ustilago maydis 521]
 gi|14279385|gb|AAK58576.1|AF268097_1 TPR-containing protein Mql1 [Ustilago maydis]
 gi|46101125|gb|EAK86358.1| hypothetical protein UM05501.1 [Ustilago maydis 521]
          Length = 1292

 Score = 42.0 bits (98), Expect = 0.081,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 49/150 (32%), Gaps = 36/150 (24%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL----------MSA 101
           +D    +  Y     ++  QN++KAYE +             ++++              
Sbjct: 392 SDPNDAQSWYLLGRAYMAGQNYNKAYEAY-------------QQAVYRDGKNPTFWCSIG 438

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
            + Y   +Y+ A       I   P    +  V++ +G S  +   +   D       +  
Sbjct: 439 VLYYQINQYRDALDAYSRAIRLNP---YISEVWFDLG-SLYEACNNQISD------AIHA 488

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
             R  +   ++P     +  + + RN  A 
Sbjct: 489 YERAADLDPDNP---QIQQRLQLLRNAEAK 515



 Score = 36.2 bits (83), Expect = 5.4,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 64/200 (32%), Gaps = 51/200 (25%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           +++ +A   +    R  P++  A  +    A V  +   +++A    +  +   PE+ + 
Sbjct: 161 EDYDRALSAYEAALRHNPYSVPALSA---IAGVHRTLDNFEKAVDYFQRVLNIVPENGDT 217

Query: 131 ----------------DYVYYLVGMSYAQMIR--------DVPYDQ-RATKLMLQYMSRI 165
                            Y  Y   + +    +         + YD+  + +   +  + +
Sbjct: 218 WGSMGHCYLMMDDLQRAYTAYQQALYHLPNPKEPKLWYGIGILYDRYGSLEHAEEAFASV 277

Query: 166 VERYTNSPYVKGARFYVTVGRNQL----AAKE-------------------VEIGRYYLK 202
           V    N        F + +   Q     A+ E                    +IG  Y +
Sbjct: 278 VRMDPNYEKANEIYFRLGIIYKQQNKFPASLECFRYILDNPPRPLTEIDIWFQIGHVYEQ 337

Query: 203 RGEYVAAIPRFQLVLANYSD 222
           + E+ AA   ++ VLA   +
Sbjct: 338 QKEFNAAKEAYERVLAENPN 357


>gi|332257109|ref|XP_003277658.1| PREDICTED: serine/threonine-protein phosphatase 5 isoform 2
           [Nomascus leucogenys]
          Length = 477

 Score = 42.0 bits (98), Expect = 0.082,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 50/166 (30%), Gaps = 34/166 (20%)

Query: 40  RQSSRDVYLDSVTDV---RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VAR 94
           R    +   D        +   E+  +A  + K +++  A ++++Q     P        
Sbjct: 8   RTDCAEPPRDEPPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGN 67

Query: 95  KSLLMSAF----VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +S    A+       Y+ G   +A  L ++YI            YY    S   +     
Sbjct: 68  RS---LAYLRTECYGYALGDATRAIELDKKYIK----------GYYRRAASNMAL----- 109

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
                 +  L+    +V+   +      A+         +  K  E
Sbjct: 110 ---GKFRAALRDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 149


>gi|326315755|ref|YP_004233427.1| hypothetical protein Acav_0937 [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323372591|gb|ADX44860.1| Tetratricopeptide TPR_1 repeat-containing protein [Acidovorax
           avenae subsp. avenae ATCC 19860]
          Length = 667

 Score = 42.0 bits (98), Expect = 0.082,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 38/115 (33%), Gaps = 16/115 (13%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           +A   +    F  A + FN      P +    + LL         G  ++A ++ ++ I 
Sbjct: 556 RAESAIGANRFDDAIKDFNALL---PASPSNPRLLLGLGMAHVGKGDTREAIAMFDQLIA 612

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT-NSPYVK 176
               + N    YY   M+Y           R     L+ + + +     N  Y +
Sbjct: 613 ---RAPNAA-AYYGRAMAY--------RGARQYAASLKDLDQAIRLDPRNPQYAQ 655


>gi|317048291|ref|YP_004115939.1| tetratricopeptide repeat-containing protein [Pantoea sp. At-9b]
 gi|316949908|gb|ADU69383.1| tetratricopeptide repeat protein [Pantoea sp. At-9b]
          Length = 389

 Score = 42.0 bits (98), Expect = 0.082,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 68/189 (35%), Gaps = 42/189 (22%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              ++    + +A + F+Q   +  F  ++    L+      +   +QQA  + E+ +  
Sbjct: 114 GRDYMAAGLYDRAEDMFSQLVDETDF-RISALQQLLLI--HQATSDWQQAIEVAEKLVKL 170

Query: 124 YPESKNVDYVYYLVG-MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
               K+        G +++              +L LQ +S                  +
Sbjct: 171 ---GKDK-----QKGEIAHF-----------YCELALQALS-----------SDDLDRAM 200

Query: 183 TVGRN------QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
           T+ +       Q A   +  GR ++++GEY  A+ R Q VL    D E   EA+  L   
Sbjct: 201 TLLKKGEAADRQSARVSIMTGRIFMEQGEYTKAVERLQRVLE--QDKELVSEALPMLETC 258

Query: 237 YVALALMDE 245
           Y  L   ++
Sbjct: 259 YQRLNQPEQ 267


>gi|239908968|ref|YP_002955710.1| putative N-acetylmuramoyl-L-alanine amidase [Desulfovibrio
           magneticus RS-1]
 gi|239798835|dbj|BAH77824.1| putative N-acetylmuramoyl-L-alanine amidase [Desulfovibrio
           magneticus RS-1]
          Length = 642

 Score = 42.0 bits (98), Expect = 0.082,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 30/92 (32%), Gaps = 7/92 (7%)

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
              Y+ AASL       +P     D       +  A+ ++               +  +V
Sbjct: 116 DADYEAAASLYGRLAQSFPTHAWADDALLRRAVILAENLKRP-------LEAKADLETLV 168

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
            +Y        AR ++    +  AAK+ E  +
Sbjct: 169 RKYPKGDMAAQARKFLAAFGDAPAAKQAEPAK 200


>gi|206890693|ref|YP_002248466.1| soluble lytic murein transglycosylase [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206742631|gb|ACI21688.1| soluble lytic murein transglycosylase [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 636

 Score = 42.0 bits (98), Expect = 0.082,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 25/71 (35%), Gaps = 2/71 (2%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           K    L   NF KA EY  +      F  +    LL  A       +Y++A     E   
Sbjct: 32  KGKNSLNSGNFQKAEEYLTK--SLQEFKEIGDYILLWRANAYKKMNRYEEALKDINELKR 89

Query: 123 QYPESKNVDYV 133
            YP+S  +   
Sbjct: 90  NYPKSPLIKDA 100


>gi|218780317|ref|YP_002431635.1| hypothetical protein Dalk_2474 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218761701|gb|ACL04167.1| protein of unknown function DUF181 [Desulfatibacillum alkenivorans
           AK-01]
          Length = 574

 Score = 42.0 bits (98), Expect = 0.082,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 49/143 (34%), Gaps = 19/143 (13%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++   V ++   +   A   F +     P    A   L+         G+YQ+A  + ++
Sbjct: 427 IFNIGVQYMALGDPETALTCFKKAMEFDPEPEDAPSILVYMGVALKDMGRYQEALGILKK 486

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS--PYVKG 177
                P+  +    + L+G  Y  + R         +  +    ++++    S   Y   
Sbjct: 487 AEAMDPDRTD---CHNLMGFCYFSLRRH--------EEAIASFQKVIDLDPGSAIDYANI 535

Query: 178 ARFYVTVGRNQLAAKEVEIGRYY 200
           A  Y       +   E+ I +YY
Sbjct: 536 ASNYRD-----MGETEMAI-QYY 552



 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 47/147 (31%), Gaps = 21/147 (14%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL-- 97
               + +  D   +      VY   V       + +A     +     P      ++   
Sbjct: 445 TCFKKAMEFDPEPEDAPSILVY-MGVALKDMGRYQEALGILKKAEAMDP-----DRTDCH 498

Query: 98  -LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
            LM  F  +S  ++++A +  ++ I   P S  +DY            I     D   T+
Sbjct: 499 NLM-GFCYFSLRRHEEAIASFQKVIDLDPGS-AIDYA----------NIASNYRDMGETE 546

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVT 183
           + +QY  + +    +  + +     + 
Sbjct: 547 MAIQYYKQALALDPSIDFARANLERLA 573


>gi|327191083|gb|EGE58135.1| putative exported protein, TonB-dependent receptor [Rhizobium etli
           CNPAF512]
          Length = 1226

 Score = 42.0 bits (98), Expect = 0.083,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 74/238 (31%), Gaps = 42/238 (17%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
           + +   Y D  T    + ++   A L    +   +A E       D P   ++ ++   +
Sbjct: 356 KKAEQRYPDDPTLPAVRAQL---AQLTDDREQMKEAIERSLALDPDHPM-ALSARAEYKA 411

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           A+          A +     I   P            G   +  +     D  A      
Sbjct: 412 AY----ESDIGGALADLNRAIELAPGDS---------GSLNSLGLLQSSRD--ANGEAET 456

Query: 161 YMSRIVERYTNSP--YVKGARFYVTVGRNQLAAKEVEIG---------------RYYLKR 203
              + +E    +P  +   A  Y+   R + A +E++                 RYYL+ 
Sbjct: 457 AFKKAIELDPQNPILHANLAMLYLDQSRTKEAKREIDTAIALDPSFDIALLVRGRYYLQI 516

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM---DEAREVVSLIQERYP 258
           GE   A+   + +LA  +      ++   L  A+         ++A +    + +  P
Sbjct: 517 GERDKAL---EDLLAASTANPAHSQSQLMLAAAHYEKGDRLPAEQALDNADRLDKNDP 571



 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 29/83 (34%), Gaps = 6/83 (7%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
           +++ R++      D  +   +  +   +L+     KA E     S   P      +S LM
Sbjct: 486 KEAKREIDTAIALDPSFDIALLVRGRYYLQIGERDKALEDLLAASTANPAHS---QSQLM 542

Query: 100 SAFVQYSAGK---YQQAASLGEE 119
            A   Y  G     +QA    + 
Sbjct: 543 LAAAHYEKGDRLPAEQALDNADR 565


>gi|300770943|ref|ZP_07080820.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33861]
 gi|300762216|gb|EFK59035.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33861]
          Length = 1023

 Score = 42.0 bits (98), Expect = 0.083,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 30/79 (37%), Gaps = 10/79 (12%)

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
            +  Y      +A    E ++ +YP +     VY+    S  +M   +          L 
Sbjct: 586 IYRDY-TKDPTEAIKAYENFLDRYPNTPAAAEVYF----SLYRMYEGIDK-----TKSLT 635

Query: 161 YMSRIVERYTNSPYVKGAR 179
           Y ++++  + N+ +   A+
Sbjct: 636 YKNKLITLFPNTIHAHVAQ 654


>gi|109125223|ref|XP_001111749.1| PREDICTED: serine/threonine-protein phosphatase 5 isoform 4 [Macaca
           mulatta]
          Length = 499

 Score = 42.0 bits (98), Expect = 0.083,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 47/148 (31%), Gaps = 31/148 (20%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF----VQ-YSA 107
           +   E+  +A  + K +++  A ++++Q     P        +S    A+       Y+ 
Sbjct: 26  KRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS---LAYLRTECYGYAL 82

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           G   +A  L ++YI            YY    S   +           +  L+    +V+
Sbjct: 83  GDATRAIELDKKYIK----------GYYRRAASNMAL--------GKFRAALRDYETVVK 124

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVE 195
              +      A+         +  K  E
Sbjct: 125 VKPHDK---DAKMKYQECNKIVKQKAFE 149


>gi|160878633|ref|YP_001557601.1| TPR repeat-containing protein [Clostridium phytofermentans ISDg]
 gi|160427299|gb|ABX40862.1| Tetratricopeptide TPR_2 repeat protein [Clostridium phytofermentans
           ISDg]
          Length = 469

 Score = 42.0 bits (98), Expect = 0.083,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 32/78 (41%), Gaps = 3/78 (3%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
             +E Y++     +++++ KA       ++ + F      +L      +   G+Y++A +
Sbjct: 387 AAKEAYQQGRAAFEKKDYEKA---LTLLTQAYSFGDPDDNTLYYLGKTEQELGQYEEAKA 443

Query: 116 LGEEYITQYPESKNVDYV 133
              + +  +P S    Y 
Sbjct: 444 YYNQMLESFPNSSLAKYA 461



 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 49/128 (38%), Gaps = 4/128 (3%)

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE-VEIGRY 199
           Y ++          T  +   +S++      +         V    + +AAKE  + GR 
Sbjct: 338 YMELESTNSLTPENTMEVADLLSKVDPSKMENQDAVKLFEMVKEKVSPIAAKEAYQQGRA 397

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
             ++ +Y  A+    L+   YS  +  +  +  L +    L   +EA+   + + E +P 
Sbjct: 398 AFEKKDYEKAL---TLLTQAYSFGDPDDNTLYYLGKTEQELGQYEEAKAYYNQMLESFPN 454

Query: 260 GYWARYVE 267
              A+Y +
Sbjct: 455 SSLAKYAK 462



 Score = 35.9 bits (82), Expect = 6.1,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 37/113 (32%), Gaps = 15/113 (13%)

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP-ESKNVDY 132
             A + F         + +A K         +    Y++A +L       Y     + D 
Sbjct: 370 QDAVKLFEMVKEK--VSPIAAKEAYQQGRAAFEKKDYEKALTLL---TQAYSFGDPD-DN 423

Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
             Y +G +  ++           +    Y ++++E + NS   K A+  V   
Sbjct: 424 TLYYLGKTEQEL--------GQYEEAKAYYNQMLESFPNSSLAKYAKQRVNDL 468


>gi|86609376|ref|YP_478138.1| TPR domain-containing protein [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86557918|gb|ABD02875.1| TPR domain protein [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 182

 Score = 42.0 bits (98), Expect = 0.083,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 38/110 (34%), Gaps = 14/110 (12%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           +  L L   +   A    ++  +  P    A  + +  ++V     + ++A +  E  I 
Sbjct: 68  QGSLKLLRGDPVAALSDLDRAVQLDP--SYAP-AYVNRSYVYNQLRQPEEALADAERAIQ 124

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
                  +   Y+  G++Y Q+           +  +    + +  ++ S
Sbjct: 125 LNAG---IPEAYFSRGVAYLQLGDR--------EAAMADFRQALALFSKS 163


>gi|61680198|pdb|1WAO|1 Chain 1, Pp5 Structure
 gi|61680199|pdb|1WAO|2 Chain 2, Pp5 Structure
 gi|61680200|pdb|1WAO|3 Chain 3, Pp5 Structure
 gi|61680201|pdb|1WAO|4 Chain 4, Pp5 Structure
          Length = 477

 Score = 42.0 bits (98), Expect = 0.083,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 47/148 (31%), Gaps = 31/148 (20%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF----VQ-YSA 107
           +   E+  +A  + K +++  A ++++Q     P        +S    A+       Y+ 
Sbjct: 4   KRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS---LAYLRTECYGYAL 60

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           G   +A  L ++YI            YY    S   +           +  L+    +V+
Sbjct: 61  GDATRAIELDKKYIK----------GYYRRAASNMAL--------GKFRAALRDYETVVK 102

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVE 195
              +      A+         +  K  E
Sbjct: 103 VKPHDK---DAKMKYQECNKIVKQKAFE 127


>gi|148265689|ref|YP_001232395.1| hypothetical protein Gura_3669 [Geobacter uraniireducens Rf4]
 gi|146399189|gb|ABQ27822.1| hypothetical protein Gura_3669 [Geobacter uraniireducens Rf4]
          Length = 76

 Score = 42.0 bits (98), Expect = 0.083,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 30/83 (36%), Gaps = 15/83 (18%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +  L +    A+ F  G    + +              +++E A    K+ N   A +
Sbjct: 1   MRRVILLVLMLWALGF-AGCSGDNGK--------------QLFETAQFEEKQHNLEHAKQ 45

Query: 79  YFNQCSRDFPFAGVARKSLLMSA 101
            + + ++ +P     +K+    A
Sbjct: 46  LYEEIAKKYPGGDYGKKAEERLA 68


>gi|332840996|ref|XP_003314116.1| PREDICTED: intraflagellar transport protein 88 homolog [Pan
           troglodytes]
          Length = 805

 Score = 42.0 bits (98), Expect = 0.083,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 85/303 (28%), Gaps = 64/303 (21%)

Query: 2   SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60
                +A+ I +    +  +       +++  + +G +  Q+S    +   +D      +
Sbjct: 409 QKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 468

Query: 61  YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
             K        ++ KA E++      D   +     +L           +  +A      
Sbjct: 469 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 521

Query: 120 YITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKL--------- 157
           ++  +   +N   V Y +   Y              Q++  +P D +             
Sbjct: 522 FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREG 581

Query: 158 ----MLQYMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEI 196
                 QY       +               ++ + + A  Y     + +      ++ +
Sbjct: 582 DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMV 641

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEAREVVSL 252
              + + G         Q  L  Y D         E +  LV     L L D A+E    
Sbjct: 642 ASCFRRSGN-------SQKALDTYKDTHRKFPENVECLRFLVRLCTDLGLKD-AQEYARK 693

Query: 253 IQE 255
           ++ 
Sbjct: 694 LKR 696



 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 66/222 (29%), Gaps = 67/222 (30%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117
            KAV +L+++++++A E      +    + V   +    + + Y    + QA+S      
Sbjct: 401 NKAVTYLRQKDYNQAVEILKVLEKKD--SRVKSAAATNLSALYYMGKDFAQASSYADIAV 458

Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147
             + Y    P    +K      N DY                     Y +G++Y ++ R 
Sbjct: 459 NSDRY---NPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNR- 514

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
                      L    ++     NS                 A    +I   Y       
Sbjct: 515 -------LDEALDCFLKLHAILRNS-----------------AEVLYQIANIYELMENPS 550

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
            AI     V++           +++L E Y       +A + 
Sbjct: 551 QAIEWLMQVVSVIPTDPQV---LSKLGELYDREGDKSQAFQY 589


>gi|300716699|ref|YP_003741502.1| Tetratricopeptide protein [Erwinia billingiae Eb661]
 gi|299062535|emb|CAX59652.1| Tetratricopeptide protein [Erwinia billingiae Eb661]
          Length = 508

 Score = 42.0 bits (98), Expect = 0.083,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 43/132 (32%), Gaps = 29/132 (21%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++        ++++A  +F       P         L      Y+AG +  A S    ++
Sbjct: 336 QQGQRAFNRGDYAEAAAHFTN-----P---------LWRGIALYNAGDFPAATSA---FL 378

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              P + +       +G SYAQ        Q+  +  L    + +    +    K  R  
Sbjct: 379 QA-PATPDT---LLWIGNSYAQ--------QKQWQQALTSYDQALSLRPDWTMAKDNRAK 426

Query: 182 VTVGRNQLAAKE 193
           +     QL  KE
Sbjct: 427 IAHIIMQLRQKE 438


>gi|282901304|ref|ZP_06309230.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
 gi|281193799|gb|EFA68770.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
          Length = 543

 Score = 42.0 bits (98), Expect = 0.083,   Method: Composition-based stats.
 Identities = 18/147 (12%), Positives = 37/147 (25%), Gaps = 34/147 (23%)

Query: 48  LDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYF-NQCSRDFPFAGVA--RKSLLMS--- 100
           L +    R   E Y K       + ++  A   +      +   +      ++ L     
Sbjct: 224 LPAPDMGRDVVEFYVKLGDKHFDDGDYIVAISNYSQALQNNKKNSYYQGELQAELNLSHK 283

Query: 101 -----------AF-----VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
                      A+       Y  G Y  A     + I       N    Y   G+++ + 
Sbjct: 284 YTDNVGNIDIYAYYKLGLAYYKLGDYDMAIFNYNQVINANVNHSN---AYNKRGLAHYKS 340

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTN 171
                   R     ++  S+ +     
Sbjct: 341 --------RNYHSAIEDFSQAISINPE 359



 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 38/131 (29%), Gaps = 36/131 (27%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--------------MSAFVQ--- 104
            +A       ++  A E ++Q     P   +  + +L                 +     
Sbjct: 366 NRAEARYLIGDYQGATEDYSQAVSIHP--DLLDQPILVEDLGELFNIKCHDEVIYKNRAD 423

Query: 105 --YSAGKYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
             Y  G Y++A     + I       N++Y   YY  G  Y              +  + 
Sbjct: 424 HLYQLGAYEEALENYNQAIAL-----NINYVDAYYQRGKIYFNK--------GIYEAAVD 470

Query: 161 YMSRIVERYTN 171
             S +++   N
Sbjct: 471 DFSMVIKTQPN 481


>gi|291190309|ref|NP_001167232.1| intraflagellar transport protein 88 homolog [Salmo salar]
 gi|223648786|gb|ACN11151.1| Intraflagellar transport protein 88 homolog [Salmo salar]
          Length = 845

 Score = 42.0 bits (98), Expect = 0.083,   Method: Composition-based stats.
 Identities = 29/259 (11%), Positives = 78/259 (30%), Gaps = 55/259 (21%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLM 99
           Q+ R   L    D      +  K      ++++ KA E++      D   +     +L  
Sbjct: 467 QADRYADLAMTADRYNPAALINKGNTVFVKKDYEKAAEFYKEALRND---SSCTE-ALYN 522

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY-------------AQMIR 146
                   G+ +++      ++  +   +N   V + +   +              Q+I 
Sbjct: 523 LGLTYKRLGRLEESLDC---FLKLHAILRNSAQVMWQLANLFEMLEDPHQAIEWLMQLIT 579

Query: 147 DVPYDQRAT-------------KLMLQYMSRIVERYT--------------NSPYVKGAR 179
             P D +                   QY       +               ++ + + A 
Sbjct: 580 VTPTDPQVLAKLGELYDSEGDKSQAFQYYQESFRYFPSNIDVIEWLGAYYIDTQFCEKAI 639

Query: 180 F---YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                 T+ +      ++ +   Y + G Y  A+  ++ +   + +     E +  LV  
Sbjct: 640 QYFERATLIQPTQVKWQLMVASCYRRSGNYQKALETYKDIHRKFPE---NIECLRFLVRL 696

Query: 237 YVALALMDEAREVVSLIQE 255
              + +  E ++  + +++
Sbjct: 697 CTDMGMK-EVQDYATKLKK 714


>gi|145524245|ref|XP_001447950.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124415483|emb|CAK80553.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1017

 Score = 42.0 bits (98), Expect = 0.083,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 65/188 (34%), Gaps = 27/188 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            K  +FL +Q +++A E F Q            ++ L  A       KY QA  L E  +
Sbjct: 241 AKGKIFLHQQKYAQAEEIFKQMK--------GVEAQLGLAQSCLKQKKYPQAIELYEAIL 292

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
             +P++ +       +G+ Y +  +    DQ           +++E    +     A   
Sbjct: 293 KDHPKNLS---ALNNLGICYLENQK---LDQ-----AKDMFQKVIE---QNHDDMIAMSN 338

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
           ++    +LA +  +      K+  ++    R   ++    D      A  RL   Y    
Sbjct: 339 LSDIEFKLAQQNKDG-----KQEAHIQETIRLSEIVTKSPDPFERAVAFNRLGACYQMQK 393

Query: 242 LMDEAREV 249
              EA + 
Sbjct: 394 KYKEAEDA 401


>gi|313672599|ref|YP_004050710.1| hypothetical protein Calni_0635 [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312939355|gb|ADR18547.1| hypothetical protein Calni_0635 [Calditerrivibrio nitroreducens DSM
           19672]
          Length = 892

 Score = 42.0 bits (98), Expect = 0.084,   Method: Composition-based stats.
 Identities = 27/236 (11%), Positives = 69/236 (29%), Gaps = 47/236 (19%)

Query: 65  VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
               +  +   A E  N+  + FP +   + + ++  ++  S G         +  I   
Sbjct: 656 RYLFENGDKKIALEQINKFLKSFPTSNYLKDAYILRGYINESLGFLDDCIKDADRVIDYN 715

Query: 125 PESKNVDYVYYLVGMSYAQMIRDV------PYDQRATKLMLQYMSRIVERYTN----SPY 174
           P+ +     YY+  +   ++ +            ++ +     +  IV    +    S Y
Sbjct: 716 PKDEE---AYYIKAICSKKINKGTSLKIFEDLANKSVRFKEVSLKEIVSLSDDPAQISNY 772

Query: 175 VKGAR-----------FYV---TVGRNQLAAKEVEI-------------GRYYLK----- 202
           +   +             +      R      +  I               YY K     
Sbjct: 773 LPQVKSIDILLYYKTLVRMLGLLEVRKDFPEYDKYIDELIASRDESFVPAGYYYKSVLMY 832

Query: 203 -RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
            + +   A+         +  +    +A+   ++ Y      + A++V  +I+  Y
Sbjct: 833 TKNDSKTALNYAMRCHYLFPKSPFTYKALQLAMQIYKKNNDQESAKKVEDIIK-NY 887


>gi|310824754|ref|YP_003957112.1| hypothetical protein STAUR_7530 [Stigmatella aurantiaca DW4/3-1]
 gi|309397826|gb|ADO75285.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 718

 Score = 42.0 bits (98), Expect = 0.084,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 71/228 (31%), Gaps = 47/228 (20%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE--YIT-QYPESK 128
           +  +A E      + +P    ++++L  +  + Y A  Y  A     E  +    YP+++
Sbjct: 77  DRKRAAESLLVVRKTYPETTASQEALYRAGVLFYEAEDYANARKSFNELLFENPIYPQAQ 136

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN- 187
           +V              +     +  A +   Q +S + ER             + +  + 
Sbjct: 137 DV-----------KLKLARSALEVGAYRDAYQTLSSLAER-------AEGAERLKLLEDA 178

Query: 188 -QLAAK----------EVEIGRYYLKRGEYVAAIPRFQLVLA---NYSDAEHAEEAM--- 230
            + A            EVE+        E  AA  R + V+    ++ D     E +   
Sbjct: 179 SRAAQGAGLYSSALTLEVELAEQAKTPEEQAAAAKRLEQVVEGRADFVDIARVAEGLSPR 238

Query: 231 --------ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
                    +L   Y  L       E ++      P   +A   + L+
Sbjct: 239 HPAWPILTFKLARIYYHLRDWTRLEETLNRFLLEAPSHPFAAQAKELL 286



 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 26/67 (38%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                 Q  +Y   VLF + ++++ A + FN+   + P    A+   L  A      G Y
Sbjct: 93  PETTASQEALYRAGVLFYEAEDYANARKSFNELLFENPIYPQAQDVKLKLARSALEVGAY 152

Query: 111 QQAASLG 117
           + A    
Sbjct: 153 RDAYQTL 159


>gi|289616291|emb|CBI57087.1| putative regulator of conidia morphology [Sordaria macrospora]
          Length = 886

 Score = 42.0 bits (98), Expect = 0.084,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 46/146 (31%), Gaps = 28/146 (19%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSA 107
             D    +  Y     +++ Q + KAYE + Q        P              + Y  
Sbjct: 249 AADQTDAQSWYLLGRCYMQLQKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQI 302

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY---AQMIRDVPYDQRATKLMLQYMSR 164
            +Y+ A       I   P    +  V+Y +G  Y      I D           L    R
Sbjct: 303 NQYRDALDAYSRAIRLNP---FISEVWYDLGTLYESCNNQISD----------ALDAYQR 349

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLA 190
             E   N+P++   +  + + RN  A
Sbjct: 350 AAELDPNNPHI---KTRLQLLRNGQA 372


>gi|163942288|ref|YP_001647172.1| heat shock protein DnaJ domain-containing protein [Bacillus
           weihenstephanensis KBAB4]
 gi|163864485|gb|ABY45544.1| heat shock protein DnaJ domain protein [Bacillus weihenstephanensis
           KBAB4]
          Length = 397

 Score = 42.0 bits (98), Expect = 0.084,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 49/129 (37%), Gaps = 14/129 (10%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
           VY  S+ +      +  +A+ +     + +A    N    ++  +          A   +
Sbjct: 59  VYDRSIQNGGEYDLLLNQALNYKNGSEYQEAINILNDLLINYSDSP---DVRYHLADCYF 115

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
             G +  A +  +E I  YP    ++Y ++L+ + Y         DQ+     +   +++
Sbjct: 116 ELGWFTDAKTAIQELIFDYPS--VIEY-HFLLFLIY--------RDQQEYSKAIAQANKL 164

Query: 166 VERYTNSPY 174
           ++    SPY
Sbjct: 165 IKLQPQSPY 173



 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 47/142 (33%), Gaps = 24/142 (16%)

Query: 136 LVGMSYAQMIR-DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF-------------Y 181
           +  ++Y +++  +    Q   K    Y  + +  Y+N  Y +  +               
Sbjct: 1   MNNLTYYELLEIEQSASQDEIKKA--YFRK-IRMYSNEKYPEEFKQLTKAYEELMNEEQR 57

Query: 182 VTVGRNQLAAKEVEI----GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
               R+     E ++       Y    EY  AI     +L NYSD+         L + Y
Sbjct: 58  AVYDRSIQNGGEYDLLLNQALNYKNGSEYQEAINILNDLLINYSDSPDVR---YHLADCY 114

Query: 238 VALALMDEAREVVSLIQERYPQ 259
             L    +A+  +  +   YP 
Sbjct: 115 FELGWFTDAKTAIQELIFDYPS 136


>gi|295092953|emb|CBK82044.1| hypothetical protein [Coprococcus sp. ART55/1]
          Length = 536

 Score = 42.0 bits (98), Expect = 0.085,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 3/67 (4%)

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
             Y  +   Y AAI     VL    D  +++ A+      Y+ L+  + A  V + + E 
Sbjct: 362 AIYKYETMTYEAAIDDLNRVL---QDTPNSDVALFYKAMCYLKLSDDNNATLVFNQLVEN 418

Query: 257 YPQGYWA 263
            P   + 
Sbjct: 419 CPNSVYY 425



 Score = 40.5 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 32/104 (30%), Gaps = 20/104 (19%)

Query: 89  FAGVARKSLLM--------SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
           +   A + L          + + +Y    Y+ A       +    ++ N D   +   M 
Sbjct: 343 YGDYASQVLSDDNKARVQSAIY-KYETMTYEAAIDDLNRVLQ---DTPNSDVALFYKAMC 398

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
           Y ++  D               +++VE   NS Y   A  Y   
Sbjct: 399 YLKLSDDNN--------ATLVFNQLVENCPNSVYYTVACDYADE 434


>gi|319789142|ref|YP_004150775.1| Tetratricopeptide TPR_1 repeat-containing protein [Thermovibrio
           ammonificans HB-1]
 gi|317113644|gb|ADU96134.1| Tetratricopeptide TPR_1 repeat-containing protein [Thermovibrio
           ammonificans HB-1]
          Length = 583

 Score = 42.0 bits (98), Expect = 0.086,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 56/151 (37%), Gaps = 22/151 (14%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           ++V      ++   RE+   A+L+L E    +A    N+     P+       LL     
Sbjct: 244 KEVLKKEPDNIYALREL---ALLYLAEGKTKEAVNALNRLVSLSPY----DLRLLSWVAA 296

Query: 104 Q-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             +   +Y+Q   + E+     P + N   VY+++G++Y              K  L+  
Sbjct: 297 NLFQLKEYRQVIPVIEKIAKLNPGNPN---VYFMLGLAYEMS--------GNLKKALEAY 345

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
            +++  +  +P        + +   +L   E
Sbjct: 346 KKVLSFHIENP---TVLERLAIVNYKLGNYE 373


>gi|312385821|gb|EFR30226.1| hypothetical protein AND_00290 [Anopheles darlingi]
          Length = 1122

 Score = 42.0 bits (98), Expect = 0.086,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 49/141 (34%), Gaps = 24/141 (17%)

Query: 133 VYYLVGMSYA--QMIRDVPYDQRATKL----MLQYMSRIVERYTNSPYVKGA-------R 179
            Y L+ +     Q +     D+   K      L    +++     + +           +
Sbjct: 640 AYSLIALGNFWLQSLHQPNRDKEKEKKHQEKALAIYKQVLRNDPKNIWAANGIGAVLAHK 699

Query: 180 FYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
             +   R+  A  +E         + I   Y+++ +Y++AI  ++  L  +    +  E 
Sbjct: 700 GCIIEARDIFAQVREATAEFCDVWINIAHIYVEQKQYISAIQMYENCLKKFYRHNNV-EV 758

Query: 230 MARLVEAYVALALMDEAREVV 250
           M  L  AY     + EA+  +
Sbjct: 759 MQYLARAYFRAGKLKEAKMTL 779


>gi|148977415|ref|ZP_01814015.1| hypothetical protein VSWAT3_22847 [Vibrionales bacterium SWAT-3]
 gi|145963367|gb|EDK28632.1| hypothetical protein VSWAT3_22847 [Vibrionales bacterium SWAT-3]
          Length = 261

 Score = 42.0 bits (98), Expect = 0.086,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 47/127 (37%), Gaps = 15/127 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            Q   D+   QR     +    +  + + +S +   + +++              G+ Y 
Sbjct: 148 YQNAVDMILKQRDYTGAIAAFQKFQKDFPDSTFTPNSHYWL--------------GQLYF 193

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + +   A+  F  V+ +Y D+    +A+ +L +         +A++    +   YP   
Sbjct: 194 AKKQDKEAVKSFAAVV-SYKDSNKRADALVKLGDIAARNNNAPQAKKYYQQVVTEYPNSA 252

Query: 262 WARYVET 268
            A+  +T
Sbjct: 253 SAKVAQT 259



 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 55/150 (36%), Gaps = 23/150 (15%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
            + S++      TDV  ++  Y+ AV   LK+++++ A   F +  +DFP +     S  
Sbjct: 128 SEGSKEASGTFSTDVD-EQTAYQNAVDMILKQRDYTGAIAAFQKFQKDFPDSTFTPNSHY 186

Query: 99  MSAFVQY-SAGKYQ-----QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
               + +      +      A    ++       +K  D       +     + D+    
Sbjct: 187 WLGQLYFAKKQDKEAVKSFAAVVSYKD------SNKRAD------ALV---KLGDIAARN 231

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYV 182
                  +Y  ++V  Y NS   K A+ ++
Sbjct: 232 NNAPQAKKYYQQVVTEYPNSASAKVAQTHL 261


>gi|332141966|ref|YP_004427704.1| ATP-dependent protease La [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327551988|gb|AEA98706.1| ATP-dependent protease La [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 397

 Score = 42.0 bits (98), Expect = 0.086,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 41/111 (36%), Gaps = 3/111 (2%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           + +L +    AV  + G    S  D+Y  +       +      + +L+  N+++A +  
Sbjct: 6   RTSLRVSLLSAVIMVTGCVSNSQSDLYGGNFDHEEAAKTRTSLGLTYLQNNNYTQAKKNL 65

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           ++      F   +       A+     G  ++A    +  I   PE+ ++ 
Sbjct: 66  DKALA---FDPRSADVQFAMAYYYQLVGDNRRAEEFYKSAIDLAPENGDIA 113


>gi|323495046|ref|ZP_08100135.1| tetratricopeptide repeat protein [Vibrio brasiliensis LMG 20546]
 gi|323310703|gb|EGA63878.1| tetratricopeptide repeat protein [Vibrio brasiliensis LMG 20546]
          Length = 389

 Score = 42.0 bits (98), Expect = 0.086,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 58/192 (30%), Gaps = 48/192 (25%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A  ++      +A + F Q   + P    A    L++ +      ++ +A +        
Sbjct: 114 AKDYMASGFLDRAEKIFEQLVDE-PDHREAALQQLVAIY--QQTREWSKAIN-------- 162

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPY------DQRATK----LMLQYMSRIVERYTNSP 173
                   Y   LV M   +M   + +       Q   +      +Q   R +       
Sbjct: 163 --------YASLLVKMGRKRMRTSIGHFWCELAMQEKAEGNHAQAMQNFKRALAEDPKCV 214

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
               A                  G+ YL   +Y + I   ++VL    D++   E +  L
Sbjct: 215 RASIAL-----------------GKLYLDNEDYRSTIKYMEMVLD--QDSDFVSEVLPTL 255

Query: 234 VEAYVALALMDE 245
            E Y  L   DE
Sbjct: 256 AECYHHLGQEDE 267


>gi|302346568|ref|YP_003814866.1| tetratricopeptide repeat protein [Prevotella melaninogenica ATCC
           25845]
 gi|302150895|gb|ADK97156.1| tetratricopeptide repeat protein [Prevotella melaninogenica ATCC
           25845]
          Length = 827

 Score = 42.0 bits (98), Expect = 0.086,   Method: Composition-based stats.
 Identities = 17/132 (12%), Positives = 39/132 (29%), Gaps = 18/132 (13%)

Query: 1   MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
           M   L  A+         + K   +   + +  FL+      S  +   +  DV    ++
Sbjct: 552 MKRTLDAAMKAIADMEETVKKLKPSSKKTFSFFFLIICMSIFSLQLSAQTKADV---DKL 608

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGE 118
           Y       ++ N+ +A + + +  +          + L        Y       A    E
Sbjct: 609 Y-------QKGNYMQAVKGYEKLLKQ------GESAALYYNLGNSYYRLDNIPHAVLSYE 655

Query: 119 EYITQYPESKNV 130
                 P  +++
Sbjct: 656 RAQRLAPSDEDI 667


>gi|237731704|ref|ZP_04562185.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226907243|gb|EEH93161.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 389

 Score = 42.0 bits (98), Expect = 0.086,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 69/189 (36%), Gaps = 30/189 (15%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              ++    + +A + FNQ + +  F   A +  L+  +   +  ++Q+A  + E  +  
Sbjct: 114 GRDYMAAGLYDRAEDMFNQLTDETDFRVGALQ-QLLQIY--QATSEWQKAIDVAERLVKL 170

Query: 124 YPESKNVDYVYYLVGMSYAQM-IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
             + + ++  ++   ++  QM   D+       K              NS          
Sbjct: 171 GKDKQRIEIAHFYCELALQQMGSDDMDRAMTLLKKGAAADK-------NS---------- 213

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
                  A   + +GR Y+ +G+Y  A+   Q V++   D E   E +  L   Y  L  
Sbjct: 214 -------ARVSIMMGRVYMVKGDYAKAVESLQRVIS--QDKELVSETLEMLQSCYQHLGK 264

Query: 243 MDEAREVVS 251
            DE  E + 
Sbjct: 265 NDEWAEFLR 273


>gi|188528063|ref|YP_001910750.1| paralysed flagella protein [Helicobacter pylori Shi470]
 gi|188144303|gb|ACD48720.1| paralysed flagella protein [Helicobacter pylori Shi470]
          Length = 803

 Score = 42.0 bits (98), Expect = 0.086,   Method: Composition-based stats.
 Identities = 12/99 (12%), Positives = 31/99 (31%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
             + RA   +    ++   + L +     +                +  TD      +Y 
Sbjct: 217 RTISRAFKNYPQTIFKKDLYLLEVIALGQLGIKKSLLIDIGAKWIKNYPTDPSIPEVLYY 276

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
            A    +  N+ +A  Y+ +   ++  +  A  + +  A
Sbjct: 277 VAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRLA 315



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 50/137 (36%), Gaps = 9/137 (6%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             +T   Y    Y +A   +  Q +  A    ++  +++P     +   L+        G
Sbjct: 188 PLLTTKGYDLNAYLEAKKQINSQAYFDALRTISRAFKNYPQTIFKKDLYLLEVIALGQLG 247

Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            K      +G ++I  YP   ++  V Y V  +  +            K  ++Y  RI+ 
Sbjct: 248 IKKSLLIDIGAKWIKNYPTDPSIPEVLYYVAKALDEN--------NNYKQAMRYYKRILL 299

Query: 168 RYTNSPYVKGARFYVTV 184
            Y NS Y   A+  + +
Sbjct: 300 EYKNSRYAPLAQMRLAI 316


>gi|317502937|ref|ZP_07961030.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
 gi|315665947|gb|EFV05521.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
          Length = 226

 Score = 42.0 bits (98), Expect = 0.087,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 24/71 (33%), Gaps = 8/71 (11%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEE 119
           + A    KE+ + +A + +    R        R + L        Y  G Y +A    E 
Sbjct: 2   DNANKAYKEKRYQQAIKDYELLLRT------QRTASLYYNLGNAYYRTGNYTKAILNYER 55

Query: 120 YITQYPESKNV 130
                P  +++
Sbjct: 56  AAKINPSDRDI 66


>gi|326434689|gb|EGD80259.1| mbre TPR repeat protein [Salpingoeca sp. ATCC 50818]
          Length = 601

 Score = 42.0 bits (98), Expect = 0.088,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 62/190 (32%), Gaps = 32/190 (16%)

Query: 61  YEK-AVLFLKEQNFSKAYEYFNQ--------CSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           Y    + +  + +F +A E + +             P                YS G Y 
Sbjct: 357 YNNLGIAYRNKGDFDRAIEQYEKALAIKGETLGEKHPSTASTFN---NLGSAYYSKGDYD 413

Query: 112 QAASLGEEYITQY-----PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM-SRI 165
           +A +  E+ +  Y      +  +    Y  +G +Y     +        +  L      +
Sbjct: 414 RAIAFYEKALAIYVETLGEKHPSTAMTYNNLGSAYNNK-GEYDKAIAFYEKALAAFVETL 472

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR--GEYVAAIPRFQLVLANYSDA 223
            E++ ++     + F + +  ++   KE      Y++R    Y +       V  ++ D 
Sbjct: 473 GEKHPST---AMSYFNIGLLHDKRGDKEQACA--YMQRALDGYTS------TVGPDHPDT 521

Query: 224 EHAEEAMARL 233
             AE  + R+
Sbjct: 522 RDAERELRRI 531


>gi|302843696|ref|XP_002953389.1| hypothetical protein VOLCADRAFT_118323 [Volvox carteri f.
           nagariensis]
 gi|300261148|gb|EFJ45362.1| hypothetical protein VOLCADRAFT_118323 [Volvox carteri f.
           nagariensis]
          Length = 240

 Score = 42.0 bits (98), Expect = 0.088,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 45/144 (31%), Gaps = 20/144 (13%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGK 109
           T      + YE  V+  +++ F++A +   +  + +     +  + +     F  ++  K
Sbjct: 111 TGEATCEDYYELGVILTRKKLFTQATKNLEKAKKVW-DGEESELAQVHNALGFCYFNMDK 169

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            + A       +   P      YV      +    + D    +   +  L      +   
Sbjct: 170 TEMAIQEYRRAVELQPG-----YV------TAWNNLGDALEKKGKWRDALVAYQEALTYA 218

Query: 170 TNSPYVKGARFYVTVGRN---QLA 190
            ++     AR      +    +LA
Sbjct: 219 PDNR---IARQRSDYCKEKVTRLA 239


>gi|193084045|gb|ACF09718.1| TPR-repeat protein [uncultured marine crenarchaeote KM3-86-C1]
          Length = 272

 Score = 42.0 bits (98), Expect = 0.088,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 54/146 (36%), Gaps = 18/146 (12%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
            +  + +  +Y +A+ F++++    A  +F +  +  P       +L           KY
Sbjct: 5   ASKEKTEDLLY-QAMSFMEKREPKSAISFFKKIIKQDP---KNIDALYNQGIALNQLRKY 60

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           Q A +  ++ +   P+           G++ A++          T   L+Y ++ +E   
Sbjct: 61  QDAITCFDKVLEINPKHIA---AINNRGIALAEL--------GNTDDALEYYNKAIEIDP 109

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEI 196
              Y   A +   V  ++L   E  I
Sbjct: 110 --KYAA-AHYNKGVLYDKLLQHEEAI 132


>gi|114677995|ref|XP_001167760.1| PREDICTED: protein phosphatase 5, catalytic subunit isoform 3 [Pan
           troglodytes]
          Length = 482

 Score = 42.0 bits (98), Expect = 0.088,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 49/156 (31%), Gaps = 31/156 (19%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF-- 102
              +   ++   E+  +A  + K +++  A ++++Q     P        +S    A+  
Sbjct: 18  EPPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS---LAYLR 74

Query: 103 --VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
                Y+ G   +A  L ++YI            YY    S   +           +  L
Sbjct: 75  TECYGYALGDATRAIELDKKYIK----------GYYRRAASNMAL--------GKFRAAL 116

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           +    +V+   +      A+         +  K  E
Sbjct: 117 RDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 149


>gi|260170235|ref|ZP_05756647.1| hypothetical protein BacD2_00045 [Bacteroides sp. D2]
 gi|315918598|ref|ZP_07914838.1| BatE [Bacteroides sp. D2]
 gi|313692473|gb|EFS29308.1| BatE [Bacteroides sp. D2]
          Length = 277

 Score = 42.0 bits (98), Expect = 0.089,   Method: Composition-based stats.
 Identities = 13/122 (10%), Positives = 37/122 (30%), Gaps = 15/122 (12%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE----------KAVLFL 68
           + K    I  S+++    G +  S      + V  +      +           +     
Sbjct: 1   MKKILFFILLSMSL-TCFGQDSLSIDTRQTNGVDSIHASHTTFSSNTLEDATKAEGDSAY 59

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
            +++++ A + +    ++      A           Y  G+  +A    E  +   P + 
Sbjct: 60  IKEDYAAAIQIYEALLKN---GE-AADVYYNLGNSYYKIGEIAKAVLNYERALLLQPGNG 115

Query: 129 NV 130
           ++
Sbjct: 116 DI 117


>gi|170076790|ref|YP_001733428.1| soluble lytic transglycosylase [Synechococcus sp. PCC 7002]
 gi|169884459|gb|ACA98172.1| soluble lytic transglycosylase [Synechococcus sp. PCC 7002]
          Length = 717

 Score = 42.0 bits (98), Expect = 0.089,   Method: Composition-based stats.
 Identities = 32/233 (13%), Positives = 67/233 (28%), Gaps = 45/233 (19%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D+   R  Y   + +L  ++ + A   F    +D+P   +    L+            +Q
Sbjct: 79  DLDRNRARYLLGMDYLVAEDGAAALAAFENLEQDYP--VLTPHILIKRGRAYELVNNPEQ 136

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM------SRIV 166
           A  +  + +  YPE        +          R   YD +     +           ++
Sbjct: 137 AQVIWFDVVQNYPEDAAAAEALF----------RLSAYDPKYADQAIAEYPAHPRTQSLI 186

Query: 167 ERY----TNSPYVKGARFY-------VTVGRNQLAAK-------EV--EIGRYYLKRGEY 206
           ++          +   R         +   R  L          E+   I   +  + +Y
Sbjct: 187 QQRLAENPQQRDLLELRLKYDADAPDIAQVRQSLMENFADQLSPEIWQAIADSFWDQWQY 246

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
             A          Y +A    + + RL  +       D+AR     + + +P 
Sbjct: 247 ADAA-------QAYPNAPRTPQNLYRLARSLQVSDQPDQARPAYQTLIQTFPD 292



 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 69/213 (32%), Gaps = 40/213 (18%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
            ++ A +        +P A    ++L   A     + +  QA    +  I  +P++    
Sbjct: 245 QYADAAQA-------YPNAPRTPQNLYRLARSLQVSDQPDQARPAYQTLIQTFPDAPETG 297

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN---SPYVKGARFYVTVGRNQ 188
                +G+   + +  +  D       L Y+ +  +++     S     A     +G N+
Sbjct: 298 -----LGL---RRLASLVND----TEALTYLDQAAQKFPEEAPSALFAKADLLEKLGSNR 345

Query: 189 LA------------------AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            A                      +    Y + G Y  AI   + +     D   A E++
Sbjct: 346 SASQTREQALNTHKDQSATTEYRWQQAERYAQEGNYTQAIEWAKAIATLTPDHTLAAESI 405

Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
               + +  L     A++      + YP+ Y+A
Sbjct: 406 FWTGKWHQQLGETQAAKQAFQQTLKDYPESYYA 438


>gi|160882766|ref|ZP_02063769.1| hypothetical protein BACOVA_00727 [Bacteroides ovatus ATCC 8483]
 gi|237720672|ref|ZP_04551153.1| BatE [Bacteroides sp. 2_2_4]
 gi|156111790|gb|EDO13535.1| hypothetical protein BACOVA_00727 [Bacteroides ovatus ATCC 8483]
 gi|229449507|gb|EEO55298.1| BatE [Bacteroides sp. 2_2_4]
          Length = 277

 Score = 42.0 bits (98), Expect = 0.089,   Method: Composition-based stats.
 Identities = 13/122 (10%), Positives = 37/122 (30%), Gaps = 15/122 (12%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE----------KAVLFL 68
           + K    I  S+++    G +  S      + V  +      +           +     
Sbjct: 1   MKKILFFILLSMSL-TCFGQDSLSIDTRQTNGVDSIHASHTTFSSNTLEDATKAEGDSAY 59

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
            +++++ A + +    ++      A           Y  G+  +A    E  +   P + 
Sbjct: 60  IKEDYAAAIQIYEALLKN---GE-AADVYYNLGNSYYKIGEIAKAVLNYERALLLQPGNG 115

Query: 129 NV 130
           ++
Sbjct: 116 DI 117


>gi|118384080|ref|XP_001025193.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89306960|gb|EAS04948.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 658

 Score = 42.0 bits (98), Expect = 0.089,   Method: Composition-based stats.
 Identities = 25/205 (12%), Positives = 64/205 (31%), Gaps = 36/205 (17%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           +Y   +         +A + F +       F    + +L    +  +      ++ +  +
Sbjct: 50  LYSLGLSQQNIYLIDEAIQSFKKCLE----FNPKHQNALNQLGYAYHQKKMINESIACYK 105

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           + I  +P        YY +G++         +D    +  +   ++ ++   N      A
Sbjct: 106 KNIELHPNDHLS---YYNLGLAL--------HDSGKFQEAISSYNKAIQLKPNYEMCYEA 154

Query: 179 ----RFYVTVGRNQLAAKE--VEI-----------GRYYLKRGEYVAAIPRFQLVLANYS 221
               +  + + +  + +    +E+              Y K G+   AI  F+  +    
Sbjct: 155 LGNLQQDMGLIQEAIFSYNKILEVNPKYENGYNCLANIYYKIGKVDEAISIFKQCIEVNP 214

Query: 222 DAEHAEEAMARLVEAYVALALMDEA 246
             E+       L   Y    + +EA
Sbjct: 215 KHENTY---INLGLTYKRKGMSEEA 236



 Score = 38.9 bits (90), Expect = 0.75,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 61/159 (38%), Gaps = 34/159 (21%)

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL-VGMSYAQMIRDVPYDQRATKLM 158
            A + Y  GK  +A S+ ++ I   P+ +N     Y+ +G++Y +           ++  
Sbjct: 189 LANIYYKIGKVDEAISIFKQCIEVNPKHENT----YINLGLTYKRK--------GMSEEA 236

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
           L    R +E   NS             RN++A     IG  Y+ +G    AI  F   L 
Sbjct: 237 LILFKRCLEI--NS-------------RNEVAHY--NIGLEYIHQGRVDEAILVF---LK 276

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQER 256
           +       EE +  L  AY    +M++A       +Q  
Sbjct: 277 SLDLNPSYEECLNSLASAYEEKGMMEDAIETYQKCLQLN 315


>gi|145552591|ref|XP_001461971.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124429808|emb|CAK94598.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1010

 Score = 42.0 bits (98), Expect = 0.090,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 66/203 (32%), Gaps = 17/203 (8%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
            Y   +Y K V       +  A   FN+  +  P     + + +       +  K+ +A 
Sbjct: 461 DYADGLYNKGVALCNLNQYEDAIRQFNKAIQLKPKNEC-KFAFINRGICLKNLKKFNEAI 519

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP----YDQ----RATKLMLQYMSRIV 166
              +E I    +  +V+ +YY  G    ++ +       YDQ     +           +
Sbjct: 520 QNYDEAIQL-SQGTDVEDIYYFKGNCLLELNKYEDAIQLYDQAIQLESVYSSSANFQEGI 578

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKE---VEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
             YTN  +   A         Q +        +G  Y     Y  A+ +F     ++   
Sbjct: 579 -AYTNLKHFDDAIQSYQHAIEQNSQNSWAYFNLGITYYNLENYEQALIQFT---RSFDIQ 634

Query: 224 EHAEEAMARLVEAYVALALMDEA 246
              ++A+     AY+ L    EA
Sbjct: 635 PTFKDAVFNEAAAYIKLKRYAEA 657


>gi|189426649|ref|YP_001953826.1| hypothetical protein Glov_3605 [Geobacter lovleyi SZ]
 gi|189422908|gb|ACD97306.1| Tetratricopeptide TPR_2 repeat protein [Geobacter lovleyi SZ]
          Length = 248

 Score = 42.0 bits (98), Expect = 0.090,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 46/141 (32%), Gaps = 14/141 (9%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
              D +   R+   +    + +L + ++S A E         P   +     +    V +
Sbjct: 122 AVKDDLFYPRHDHALINLGLAYLGKGDYSAALEELYTARSADPRNPI---VKVAIGRVLF 178

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
           + GK QQAA      I     + +    ++ +G++  +        Q            +
Sbjct: 179 AQGKTQQAADEYRRAIEI---APDYAQAHFQLGLALMK--------QSQLAAARAAFKEV 227

Query: 166 VERYTNSPYVKGARFYVTVGR 186
           V    +S     A  Y+ + R
Sbjct: 228 VRIAPDSEIGHTAIGYIDLLR 248


>gi|332838298|ref|XP_508927.3| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP4 [Pan
           troglodytes]
          Length = 459

 Score = 42.0 bits (98), Expect = 0.091,   Method: Composition-based stats.
 Identities = 19/146 (13%), Positives = 46/146 (31%), Gaps = 30/146 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARKSL-------LMSAFVQYSAGK 109
           E+  ++ KE  + +A   + +      +        A+K+        L  A        
Sbjct: 275 ERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQA 334

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           +  A     + +     ++      +  G ++  +           +L      ++++ Y
Sbjct: 335 FSAAIESCNKALELDSNNEKG---LFRRGEAHLAVND--------FELARADFQKVLQLY 383

Query: 170 TNSPYVKGARFYVTVG----RNQLAA 191
            N+     A+  + V     R QLA 
Sbjct: 384 PNNK---AAKTQLAVCQQRIRRQLAR 406


>gi|313674274|ref|YP_004052270.1| hypothetical protein [Marivirga tractuosa DSM 4126]
 gi|312940972|gb|ADR20162.1| Tetratricopeptide TPR_1 repeat-containing protein [Marivirga
           tractuosa DSM 4126]
          Length = 1080

 Score = 42.0 bits (98), Expect = 0.091,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 53/146 (36%), Gaps = 24/146 (16%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---S 84
             I++ FLV +   +      +S T +   +E+  +A     E  + +A   + +     
Sbjct: 4   LLISILFLVNFALSA-----QNSPTPLINSQELLTEANTLSNEGKYEEAIPLYLKISESD 58

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
            ++       K L    F      ++++A ++GEEY  +   +       Y   + +   
Sbjct: 59  TNY------VKMLSELIFAYNKTDQFEKAITIGEEY--KNSTNP------YR--LVFYNQ 102

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYT 170
           +          +  ++ +   +E+Y 
Sbjct: 103 LGTAYLGLGKKEKAIKEIETALEKYP 128


>gi|193083980|gb|ACF09655.1| TPR-repeat protein [uncultured marine crenarchaeote AD1000-56-E4]
          Length = 272

 Score = 42.0 bits (98), Expect = 0.091,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 65/191 (34%), Gaps = 38/191 (19%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
            +  + +  +Y +A+ F++++    A  +F +  +  P       +L           KY
Sbjct: 5   TSKEKTEDLLY-QAMSFMEKREPKSAISFFKKIIKQDP---KNIDALYNQGIALNQLRKY 60

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           Q A +  ++ +   P+           G++ A++          T   L+Y ++ +E   
Sbjct: 61  QDAITCFDKVLEINPKHIA---AINNKGIALAEL--------GNTDDALEYYNKAIEIDP 109

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGR---------------YYL-----KRGEYVAAI 210
              Y   A +   V  ++L   E  I                 +Y      K  ++  A+
Sbjct: 110 --KYAA-AHYNKGVLYDKLLQHEEAIQNLDEAIKCDSVNVNTAFYRGVVLGKMKKHEEAL 166

Query: 211 PRFQLVLANYS 221
             F+ +   + 
Sbjct: 167 NCFENIYRKHP 177


>gi|405833|gb|AAA60471.1| CDC27 [Homo sapiens]
          Length = 823

 Score = 42.0 bits (98), Expect = 0.091,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 48/190 (25%), Gaps = 38/190 (20%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 585 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 634

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178
           N    +Y +GM Y +  +     +   +  L    +          +      S      
Sbjct: 635 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 690

Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                V   +N L            +  +Y +A+   + +                + + 
Sbjct: 691 LNKAIVIDPKNPLCK--FHRASVLFRNEKYKSALQELEELKQIVPKESLVY---FLIGKV 745

Query: 237 YVALALMDEA 246
           Y  L     A
Sbjct: 746 YKKLGQTHLA 755


>gi|299145613|ref|ZP_07038681.1| aerotolerance-related exported protein [Bacteroides sp. 3_1_23]
 gi|298516104|gb|EFI39985.1| aerotolerance-related exported protein [Bacteroides sp. 3_1_23]
          Length = 277

 Score = 42.0 bits (98), Expect = 0.091,   Method: Composition-based stats.
 Identities = 13/122 (10%), Positives = 37/122 (30%), Gaps = 15/122 (12%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE----------KAVLFL 68
           + K    I  S+++    G +  S      + V  +      +           +     
Sbjct: 1   MKKILFFILLSMSL-TCFGQDSLSIDTRQTNGVDSIHASHTTFSSNTLEDATKAEGDSAY 59

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
            +++++ A + +    ++      A           Y  G+  +A    E  +   P + 
Sbjct: 60  IKEDYAAAIQIYEALLKN---GE-AADVYYNLGNSYYKIGEIAKAVLNYERALLLQPGNG 115

Query: 129 NV 130
           ++
Sbjct: 116 DI 117


>gi|294788232|ref|ZP_06753475.1| putative periplasmic protein [Simonsiella muelleri ATCC 29453]
 gi|294483663|gb|EFG31347.1| putative periplasmic protein [Simonsiella muelleri ATCC 29453]
          Length = 255

 Score = 42.0 bits (98), Expect = 0.091,   Method: Composition-based stats.
 Identities = 21/159 (13%), Positives = 47/159 (29%), Gaps = 21/159 (13%)

Query: 39  ERQSSRDVYLDSVTDVRYQREV---------YEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
             Q  + +      +V    ++         YE A    +++N+ +              
Sbjct: 108 GTQPEKTLLAPDAPEVPTLAQIAPVTIKNDAYELAQKQFRQKNYQQVINMLRNADAGGDG 167

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           + +ARK + +           Q   ++G+    ++  S       ++VG           
Sbjct: 168 SIMARKQMYLLLLSHQKLNNCQSVINIGQRLAGRFSGSHEAAEAQFMVGQC--------Q 219

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +D +   +      R++    NS     A        NQ
Sbjct: 220 WDIQQRDIAKDTWRRLIASQPNS----SAAQRAKFAINQ 254


>gi|256087899|ref|XP_002580099.1| protein phosphatase-5 [Schistosoma mansoni]
 gi|238665607|emb|CAZ36338.1| protein phosphatase-5, putative [Schistosoma mansoni]
          Length = 487

 Score = 42.0 bits (98), Expect = 0.091,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 47/149 (31%), Gaps = 28/149 (18%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAG 108
           T       + E+A  F K+ ++ KA + + +         +  +A +SL           
Sbjct: 5   TISDEAEALKEEANKFFKDGDYEKAIDAYTKAIEIRETAVY--LANRSL-----AYLRTE 57

Query: 109 KYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
            +  A     + I+      +  YV  YY    ++  +           K  L     ++
Sbjct: 58  CFGYALDDASKAISL-----DSSYVKGYYRRASAHMAL--------GQYKEALADYETVI 104

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
               +      AR  +T  R  +  K  E
Sbjct: 105 RVAPSDK---MAREKLTECRKIIRRKAFE 130


>gi|268679163|ref|YP_003303594.1| hypothetical protein Sdel_0522 [Sulfurospirillum deleyianum DSM
           6946]
 gi|268617194|gb|ACZ11559.1| Tetratricopeptide TPR_2 repeat protein [Sulfurospirillum deleyianum
           DSM 6946]
          Length = 306

 Score = 42.0 bits (98), Expect = 0.091,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 27/67 (40%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
             +  Y +AI  ++  ++ +  A +    +     ++  L    EA+     ++  YP  
Sbjct: 240 YSKKSYASAIEYYKTSISLFDKAAYIPTLLYHTGTSFEKLGKAKEAQGFYKALKANYPTS 299

Query: 261 YWARYVE 267
             A+ V+
Sbjct: 300 PEAKKVK 306



 Score = 40.9 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 19/140 (13%), Positives = 47/140 (33%), Gaps = 11/140 (7%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
           ++S+  V        +    + ++A  F + ++++ A   + +            K    
Sbjct: 178 KESTPSVTSKQDLSSKDSASLMKEADTFFENKSYTNAEPLYKELLNR---NYKPAKVNFN 234

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
              + YS   Y  A    +  I+ + ++  +  + Y  G S+ ++           K   
Sbjct: 235 LGEIAYSKKSYASAIEYYKTSISLFDKAAYIPTLLYHTGTSFEKL--------GKAKEAQ 286

Query: 160 QYMSRIVERYTNSPYVKGAR 179
            +   +   Y  SP  K  +
Sbjct: 287 GFYKALKANYPTSPEAKKVK 306


>gi|223937977|ref|ZP_03629876.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514]
 gi|223893378|gb|EEF59840.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514]
          Length = 157

 Score = 42.0 bits (98), Expect = 0.091,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 19/60 (31%), Gaps = 7/60 (11%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAAS 115
           +E Y+ A+      ++  A   F     + P  F      + L      Y    Y +A  
Sbjct: 5   QERYDDAMYDFSMADYDGAIAKFQAILAEDPNFF-----DAQLSLGMAYYRKEDYAKAIE 59


>gi|145601929|ref|XP_359458.2| hypothetical protein MGG_05319 [Magnaporthe oryzae 70-15]
 gi|145010394|gb|EDJ95050.1| hypothetical protein MGG_05319 [Magnaporthe oryzae 70-15]
          Length = 681

 Score = 42.0 bits (98), Expect = 0.091,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 58/191 (30%), Gaps = 23/191 (12%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV-ARKSLLMSAFVQYSAGKYQQAASLGEE- 119
           E A   LK  + S      +   ++ P+  +  RK  LM             +    +  
Sbjct: 307 EAAQSALKSGHASFVLRALDLAEKNLPYGALRPRKWQLMRGEALLKMAD-INSIGDAQNI 365

Query: 120 ---YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
               +    +         L G S           Q      +Q+  + V    +     
Sbjct: 366 AMSLLRINNQDPE---ALGLRGRSLYA--------QGENDKAIQHFRKAVSLDPDFK--- 411

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA-EEAMARLVE 235
            A  ++ V +     KE     Y  K G++ AAI ++   L    D +    + +     
Sbjct: 412 DAVKWLRVVQKLDRMKEEGNVEY--KAGKWQAAIEKYSAALQVDPDNKGTNSKILQNRAL 469

Query: 236 AYVALALMDEA 246
           AY  L   D+A
Sbjct: 470 AYNKLKQYDQA 480


>gi|114677993|ref|XP_001167704.1| PREDICTED: serine/threonine-protein phosphatase 5 isoform 1 [Pan
           troglodytes]
          Length = 477

 Score = 42.0 bits (98), Expect = 0.091,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 49/156 (31%), Gaps = 31/156 (19%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF-- 102
              +   ++   E+  +A  + K +++  A ++++Q     P        +S    A+  
Sbjct: 18  EPPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS---LAYLR 74

Query: 103 --VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
                Y+ G   +A  L ++YI            YY    S   +           +  L
Sbjct: 75  TECYGYALGDATRAIELDKKYIK----------GYYRRAASNMAL--------GKFRAAL 116

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           +    +V+   +      A+         +  K  E
Sbjct: 117 RDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 149


>gi|120554730|ref|YP_959081.1| TPR repeat-containing protein [Marinobacter aquaeolei VT8]
 gi|120324579|gb|ABM18894.1| Tetratricopeptide TPR_2 repeat protein [Marinobacter aquaeolei VT8]
          Length = 189

 Score = 42.0 bits (98), Expect = 0.091,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 59/186 (31%), Gaps = 28/186 (15%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREV----YEKAVLFLKEQNFSKAYEYFNQCSRD 86
            +C L+               +D + ++ V    + +AV  +K+ NF++A   F Q +R+
Sbjct: 8   GLCLLLSVALSGCVTAPTPPESDPQAEQAVLEVSFSEAVKAMKQGNFTEARTVFEQLARN 67

Query: 87  FPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
           +P     +A         + +  G    A    E      PE         +  +++  +
Sbjct: 68  YPDKAGPMA-----NLGIIAFREGDADGAKEWFERARAVNPEH--------VQALNHLGV 114

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
           I     +        +Y    +    +  Y   A   +    +       +    Y +  
Sbjct: 115 I---ARNAGEFDEAERYYRAALAADPD--YAP-AILNLAFLLDIYLGNPADAIELYER-- 166

Query: 205 EYVAAI 210
            Y +A 
Sbjct: 167 -YQSAA 171


>gi|61355277|gb|AAX41123.1| FK506 binding protein 4 59kDa [synthetic construct]
          Length = 459

 Score = 42.0 bits (98), Expect = 0.092,   Method: Composition-based stats.
 Identities = 19/146 (13%), Positives = 46/146 (31%), Gaps = 30/146 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARKSL-------LMSAFVQYSAGK 109
           E+  ++ KE  + +A   + +      +        A+K+        L  A        
Sbjct: 275 ERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQA 334

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           +  A     + +     ++      +  G ++  +           +L      ++++ Y
Sbjct: 335 FSAAIESCNKALELDSNNEKG---LFRRGEAHLAVND--------FELARADFQKVLQLY 383

Query: 170 TNSPYVKGARFYVTVG----RNQLAA 191
            N+     A+  + V     R QLA 
Sbjct: 384 PNNK---AAKTQLAVCQQRIRRQLAR 406


>gi|60653315|gb|AAX29352.1| FK506 binding protein 4 [synthetic construct]
 gi|60825929|gb|AAX36740.1| FK506 binding protein 4 [synthetic construct]
          Length = 460

 Score = 42.0 bits (98), Expect = 0.092,   Method: Composition-based stats.
 Identities = 19/146 (13%), Positives = 46/146 (31%), Gaps = 30/146 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARKSL-------LMSAFVQYSAGK 109
           E+  ++ KE  + +A   + +      +        A+K+        L  A        
Sbjct: 275 ERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQA 334

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           +  A     + +     ++      +  G ++  +           +L      ++++ Y
Sbjct: 335 FSAAIESCNKALELDSNNEKG---LFRRGEAHLAVND--------FELARADFQKVLQLY 383

Query: 170 TNSPYVKGARFYVTVG----RNQLAA 191
            N+     A+  + V     R QLA 
Sbjct: 384 PNNK---AAKTQLAVCQQRIRRQLAR 406


>gi|54298845|ref|YP_125214.1| hypothetical protein lpp2912 [Legionella pneumophila str. Paris]
 gi|53752630|emb|CAH14065.1| hypothetical protein lpp2912 [Legionella pneumophila str. Paris]
          Length = 293

 Score = 42.0 bits (98), Expect = 0.092,   Method: Composition-based stats.
 Identities = 10/70 (14%), Positives = 25/70 (35%), Gaps = 8/70 (11%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
            A    +  ++ +A + FN+            +            GKY++A    ++ + 
Sbjct: 56  AASAAYRAGDYEQAAKLFNELK--------TEQGYYNQGNALAHLGKYEEAIRAYDKALA 107

Query: 123 QYPESKNVDY 132
             P +++  Y
Sbjct: 108 FNPNNQDALY 117


>gi|4503729|ref|NP_002005.1| peptidyl-prolyl cis-trans isomerase FKBP4 [Homo sapiens]
 gi|399866|sp|Q02790|FKBP4_HUMAN RecName: Full=Peptidyl-prolyl cis-trans isomerase FKBP4;
           Short=PPIase FKBP4; AltName: Full=51 kDa FK506-binding
           protein; Short=FKBP51; AltName: Full=52 kDa
           FK506-binding protein; Short=52 kDa FKBP; Short=FKBP-52;
           AltName: Full=59 kDa immunophilin; Short=p59; AltName:
           Full=FK506-binding protein 4; Short=FKBP-4; AltName:
           Full=FKBP59; AltName: Full=HSP-binding immunophilin;
           Short=HBI; AltName: Full=Immunophilin FKBP52; AltName:
           Full=Rotamase; Contains: RecName: Full=Peptidyl-prolyl
           cis-trans isomerase FKBP4, N-terminally processed
 gi|186390|gb|AAA36111.1| immunophilin [Homo sapiens]
 gi|12804711|gb|AAH01786.1| FK506 binding protein 4, 59kDa [Homo sapiens]
 gi|14043983|gb|AAH07924.1| FK506 binding protein 4, 59kDa [Homo sapiens]
 gi|60656373|gb|AAX32750.1| FK506 binding protein 4 [synthetic construct]
 gi|60814184|gb|AAX36290.1| FK506 binding protein 4 [synthetic construct]
 gi|119609295|gb|EAW88889.1| FK506 binding protein 4, 59kDa, isoform CRA_a [Homo sapiens]
 gi|119609296|gb|EAW88890.1| FK506 binding protein 4, 59kDa, isoform CRA_a [Homo sapiens]
 gi|123993985|gb|ABM84594.1| FK506 binding protein 4, 59kDa [synthetic construct]
 gi|123998249|gb|ABM86726.1| FK506 binding protein 4, 59kDa [synthetic construct]
 gi|168277778|dbj|BAG10867.1| FK506 binding protein 4 [synthetic construct]
          Length = 459

 Score = 42.0 bits (98), Expect = 0.092,   Method: Composition-based stats.
 Identities = 19/146 (13%), Positives = 46/146 (31%), Gaps = 30/146 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARKSL-------LMSAFVQYSAGK 109
           E+  ++ KE  + +A   + +      +        A+K+        L  A        
Sbjct: 275 ERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQA 334

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           +  A     + +     ++      +  G ++  +           +L      ++++ Y
Sbjct: 335 FSAAIESCNKALELDSNNEKG---LFRRGEAHLAVND--------FELARADFQKVLQLY 383

Query: 170 TNSPYVKGARFYVTVG----RNQLAA 191
            N+     A+  + V     R QLA 
Sbjct: 384 PNNK---AAKTQLAVCQQRIRRQLAR 406


>gi|88812660|ref|ZP_01127907.1| tfp pilus assembly protein PilF [Nitrococcus mobilis Nb-231]
 gi|88790076|gb|EAR21196.1| tfp pilus assembly protein PilF [Nitrococcus mobilis Nb-231]
          Length = 257

 Score = 42.0 bits (98), Expect = 0.092,   Method: Composition-based stats.
 Identities = 33/271 (12%), Positives = 73/271 (26%), Gaps = 58/271 (21%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAY 77
           + ++A  +   + VC +V     ++      S   ++   E+  +  + +L+     +A 
Sbjct: 1   MRRYAAVL---LTVCNMVLAAGCATDSKPRPSPEALQKASEINTQIGIRYLQTGELQQAV 57

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV------- 130
               +  +          + +    V     +  QA +     I   P + +        
Sbjct: 58  RKLEKALKQDAGNA---DAHMTLGVVYERLDETVQARAHYRRAIELQPNNSSALNNYGQF 114

Query: 131 -------DYV--YYLVGMSY-AQMIRDVPY--------DQRATKLMLQYMSRIVE---RY 169
                  D     +L            VP             TK    +  R ++   R+
Sbjct: 115 LCERDEYDRAERLFLRAAENPTYESPQVPLANAGVCAIQDGDTKRAEDFFLRALKYEPRF 174

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
             S     A+            +     R Y +R  Y+A                 +   
Sbjct: 175 P-SALAHMAQLRFD-------GRHFLSARGYYQR--YLAVA-------------RQSPST 211

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260
           +   +    AL   D       L++ ++P  
Sbjct: 212 LWLGIRLEHALGDKDAVASYKLLLKGKFPDS 242


>gi|189468200|ref|ZP_03016985.1| hypothetical protein BACINT_04596 [Bacteroides intestinalis DSM
           17393]
 gi|189436464|gb|EDV05449.1| hypothetical protein BACINT_04596 [Bacteroides intestinalis DSM
           17393]
          Length = 995

 Score = 42.0 bits (98), Expect = 0.093,   Method: Composition-based stats.
 Identities = 25/184 (13%), Positives = 61/184 (33%), Gaps = 34/184 (18%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLV-----GMSYAQMIRDVPYDQRATKLMLQ 160
               +++A +  E  + ++P+    D  YY +      ++Y   +  +           +
Sbjct: 616 RMQDFKRAEAAFERLVREFPDFAQADEAYYQLFLTELALNYYGELPALQR-------AEK 668

Query: 161 YMSRIVERYTNSPYVKGA------------RFYVTVGRNQLAAKEVEIGRYYLKRGE-YV 207
           Y + ++ R+  S Y K              +        + A K  ++G     R   ++
Sbjct: 669 YKAELIARFPKSRYAKTLADPDFAENAVYGKQREDSLYAR-AYKHFQLGDTTTVRAAEHL 727

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
           +A          Y   +H  + M       +     D+   ++  + ++YPQ        
Sbjct: 728 SA--------EIYPLGQHRPKFMFLNAVTRLQGGETDQFLAILKELVQQYPQNEITDLAA 779

Query: 268 TLVK 271
            ++K
Sbjct: 780 HILK 783


>gi|148361165|ref|YP_001252372.1| hypothetical protein LPC_3139 [Legionella pneumophila str. Corby]
 gi|148282938|gb|ABQ57026.1| hypothetical protein LPC_3139 [Legionella pneumophila str. Corby]
          Length = 322

 Score = 42.0 bits (98), Expect = 0.093,   Method: Composition-based stats.
 Identities = 10/70 (14%), Positives = 25/70 (35%), Gaps = 8/70 (11%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
            A    +  ++ +A + FN+            +            GKY++A    ++ + 
Sbjct: 55  AASAAYRAGDYEQAAKLFNELK--------TEQGYYNQGNALAHLGKYEEAIRAYDKALA 106

Query: 123 QYPESKNVDY 132
             P +++  Y
Sbjct: 107 FNPNNQDALY 116


>gi|74003532|ref|XP_535843.2| PREDICTED: similar to leprecan-like 1 isoform 1 [Canis familiaris]
          Length = 709

 Score = 42.0 bits (98), Expect = 0.093,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 6/68 (8%)

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           F  Y  G+Y +A    + Y+  +P+ ++V     L  + Y + + D   D  A+    + 
Sbjct: 315 FAYYRVGEYVKALECAKAYLLLHPDDEDV-----LDNVDYYEGLLDDSSDP-ASIEARED 368

Query: 162 MSRIVERY 169
           ++  V+R+
Sbjct: 369 LAMFVKRH 376


>gi|72383170|ref|YP_292525.1| TPR repeat-containing protein [Prochlorococcus marinus str. NATL2A]
 gi|72003020|gb|AAZ58822.1| TPR repeat [Prochlorococcus marinus str. NATL2A]
          Length = 288

 Score = 42.0 bits (98), Expect = 0.093,   Method: Composition-based stats.
 Identities = 14/130 (10%), Positives = 39/130 (30%), Gaps = 10/130 (7%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
             +++K+ L +                 R    +        R++ + A+  ++   + +
Sbjct: 4   TSKIFKYFLGLSLIKTFFVPNSSIAFFPRINEPNQQEFESTSRQIGKTAIQLIQFGQYKE 63

Query: 76  AYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
           A +      +  P              A  Q+       A    ++ +   P++ ++   
Sbjct: 64  AIKILKLALKLNPTEETLWTT-----LADAQFKLKDSNNALLSLDKVLAINPKNASI--- 115

Query: 134 YYLVGMSYAQ 143
           Y+  G  Y  
Sbjct: 116 YFAKGSIYMN 125


>gi|87308944|ref|ZP_01091082.1| hypothetical protein DSM3645_19343 [Blastopirellula marina DSM
           3645]
 gi|87288287|gb|EAQ80183.1| hypothetical protein DSM3645_19343 [Blastopirellula marina DSM
           3645]
          Length = 857

 Score = 42.0 bits (98), Expect = 0.093,   Method: Composition-based stats.
 Identities = 22/188 (11%), Positives = 60/188 (31%), Gaps = 17/188 (9%)

Query: 11  IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTD------VRYQREVYEKA 64
           +      Q+ +  L     +A    +G   Q   +  +D   D          +  +  A
Sbjct: 343 LAGTSPQQMRQLGLVGIVGLAKLGRIGAAIQLLDEHQIDVSGDPGFYLLWLEGQRQFAAA 402

Query: 65  VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS--LLMSAFVQYSAGKYQQAASLGEEYI- 121
               +E+++ +A     +   + P       +    +  +  Y   ++ +A+    + I 
Sbjct: 403 EKSKEERDYKEAKVLLIKAVANPPTGDAGALAECQYVLGWCCYRLKQFAEASGAFRQAIA 462

Query: 122 --TQ-YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
                 P+ K V+  +    +++  +      D R     +  +  +   + +  Y K A
Sbjct: 463 GLKLSNPQ-KGVESAW----LAFVSLQSLAKTDPRYAAAAIDVLEDLKRDFPDHSYAKKA 517

Query: 179 RFYVTVGR 186
              +   +
Sbjct: 518 DLLIARLQ 525


>gi|254410536|ref|ZP_05024315.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC
           7420]
 gi|196182742|gb|EDX77727.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC
           7420]
          Length = 1491

 Score = 42.0 bits (98), Expect = 0.094,   Method: Composition-based stats.
 Identities = 35/254 (13%), Positives = 70/254 (27%), Gaps = 52/254 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            +     K   + +A   F+Q     P  +     +         +  G+Y++A +  ++
Sbjct: 385 NRGAALFKLGRYEEALANFDQVISLQPDYYPAWDNRGA-----ALFKLGRYEEALANFDQ 439

Query: 120 YITQ----YPESKNVDYVYYLVG-----MSYAQMIRDVPYDQRAT--------------K 156
            I+     YP   N     + +G     ++    +  +  D                  +
Sbjct: 440 VISLQPDYYPAWDNRGAALFKLGRNEEALASFDQVISLQPDDYHAWFKRGVALGELGRNE 499

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG---EYVAAIP-- 211
             L    +++    +  Y         V    L   E  +  +        +Y +A    
Sbjct: 500 EALASFDQVISLQPD--YYPAWDNRGVVLFE-LGRNEEALANFDQAISLQPDYSSAWNNR 556

Query: 212 --------RFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
                   R +  L N+  A         A  +   A   L   +EA      +    P 
Sbjct: 557 GAALFKLGRHEEALTNFDQAISLQPDDYHAWFKRGVALFKLGRHEEALTNFDQVISLQPD 616

Query: 260 GY--WARYVETLVK 271
            Y  W +    L K
Sbjct: 617 DYHAWFKRGVALFK 630



 Score = 40.1 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 32/211 (15%), Positives = 70/211 (33%), Gaps = 47/211 (22%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            +     +   + +A   F+Q     P   +    +       V +  G+ ++A +  ++
Sbjct: 283 NRGAALGELGRYEEALANFDQAISLQPDDSSAWNNR-----GVVLFKLGRNEEALASFDQ 337

Query: 120 YITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            I+  P+    DY  ++ +G++  ++ R+        +  L    +++    +  Y    
Sbjct: 338 VISLQPD----DYHAWFKLGVALGELGRN--------EEALASFDQVISLQPD--YYPAW 383

Query: 179 RFYVTVGRNQLAAKEVEIG----------RYY----------LKRGEYVAAIPRFQLVL- 217
                    +L   E  +            YY           K G Y  A+  F  V+ 
Sbjct: 384 DNRGAALF-KLGRYEEALANFDQVISLQPDYYPAWDNRGAALFKLGRYEEALANFDQVIS 442

Query: 218 ---ANYSDAEHAEEAMARLVEAYVALALMDE 245
                Y   ++   A+ +L     ALA  D+
Sbjct: 443 LQPDYYPAWDNRGAALFKLGRNEEALASFDQ 473



 Score = 35.1 bits (80), Expect = 9.5,   Method: Composition-based stats.
 Identities = 39/300 (13%), Positives = 84/300 (28%), Gaps = 94/300 (31%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
            +A     G+ ++S   V + + + V      + + V   +   + +A   F+Q     P
Sbjct: 151 LLAGLKGSGYNQES---VPVSNSSTVSGAEFWFNQGVTLYELGRYEEALAKFDQAISLQP 207

Query: 89  --FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP-----------------ESK- 128
             +     +  ++        G++++A +  +  I+  P                   K 
Sbjct: 208 DYYHPWDNRGGVLI-----KLGRHKEALASFDRAISLQPDYYQAWRGRGVVLGMLGRHKE 262

Query: 129 ---NVDYVY----------------------YLVGMSYAQMIRDVPYDQRAT-------- 155
              N+D                         Y   ++       +  D  +         
Sbjct: 263 ALANLDQAISLQPDFYKTWDNRGAALGELGRYEEALANFDQAISLQPDDSSAWNNRGVVL 322

Query: 156 ------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG----------RY 199
                 +  L    +++    +  +     F + V   +L   E  +            Y
Sbjct: 323 FKLGRNEEALASFDQVISLQPDDYHAW---FKLGVALGELGRNEEALASFDQVISLQPDY 379

Query: 200 Y----------LKRGEYVAAIPRFQLVL----ANYSDAEHAEEAMARLVEAYVALALMDE 245
           Y           K G Y  A+  F  V+      Y   ++   A+ +L     ALA  D+
Sbjct: 380 YPAWDNRGAALFKLGRYEEALANFDQVISLQPDYYPAWDNRGAALFKLGRYEEALANFDQ 439


>gi|116753411|ref|YP_842529.1| TPR repeat-containing protein [Methanosaeta thermophila PT]
 gi|116664862|gb|ABK13889.1| Tetratricopeptide TPR_2 repeat protein [Methanosaeta thermophila
           PT]
          Length = 366

 Score = 42.0 bits (98), Expect = 0.094,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 47/116 (40%), Gaps = 6/116 (5%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
           +G   ++   +      D  + +  Y K + F     +  A E F++  R  P    A K
Sbjct: 236 MGIPSKAIDAIDSALTLDPEHAQSWYAKGITFRAMGLYEDALECFDRVLRIDPGNASALK 295

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
           S    A+  Y+ G+Y +A S  E  I+  P  ++    +Y +G+    + R    D
Sbjct: 296 SR---AWSLYNLGRYAEALSACEGAISVNPLDED---AWYNMGIVLKALGRYTESD 345


>gi|326436558|gb|EGD82128.1| tetratricopeptide TPR_2 repeat protein [Salpingoeca sp. ATCC 50818]
          Length = 745

 Score = 42.0 bits (98), Expect = 0.095,   Method: Composition-based stats.
 Identities = 28/223 (12%), Positives = 68/223 (30%), Gaps = 42/223 (18%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQ--------CSRDFPF--AGVARKSLLMSAFVQYSAGKYQ 111
                +  ++ + +A E++ +             P   +          A      GK+ 
Sbjct: 367 NLGNAYANKREYDRAIEFYEKALAIKVETLGEKHPGTASTYN-----NLAIAYAEKGKHD 421

Query: 112 QAASLGEEYIT-----QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR-I 165
           +A +  E  +T        +  +    Y  +G++Y     +        +  L   +  +
Sbjct: 422 EAIACYERALTATVEMLGEKHPSAADTYNNLGVAYRSQ-GEYKRAIGYCEKALAIRAETL 480

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
            ER+ ++         +     ++   +  IG +        A   R   +   +     
Sbjct: 481 GERHPST---ADTYTNLGTVYAEIGEHDKAIGCF------EKALAIRVATLGDKHPSTAD 531

Query: 226 AEEAMARLVEAY-------VALALMDEAREVV-SLIQERYPQG 260
                  L  AY        A+A  ++A++   +L+ E +P  
Sbjct: 532 TY---NVLGNAYADKGEYAKAIASHEKAKDAFGALLGETHPNT 571


>gi|221487515|gb|EEE25747.1| hypothetical protein TGGT1_088450 [Toxoplasma gondii GT1]
          Length = 548

 Score = 42.0 bits (98), Expect = 0.095,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 49/172 (28%), Gaps = 36/172 (20%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVAR-----KSLL-MSAFVQYS 106
           V     +  +   F K + F +A E +             A+     + LL   AF Q +
Sbjct: 58  VAEAESLKTEGNEFFKTRLFHQAVEKYTAAIDLICSNTMTAQTKQILQVLLCNRAFCQIN 117

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
              Y  A    E  I   P        YY  G +Y  + R         K   +   R++
Sbjct: 118 LENYGSAVVDAERVIQMNPLFAK---AYYRRGCAYCCLSR--------YKKAQKDFERVI 166

Query: 167 ERY--TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                 +          +   + Q+            +   + AAI   Q +
Sbjct: 167 ALSATPD----PSVVSRLNECKKQI------------RLEAFAAAIETQQTM 202


>gi|86146496|ref|ZP_01064819.1| hypothetical protein MED222_12813 [Vibrio sp. MED222]
 gi|85835759|gb|EAQ53894.1| hypothetical protein MED222_12813 [Vibrio sp. MED222]
          Length = 260

 Score = 42.0 bits (98), Expect = 0.095,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 46/127 (36%), Gaps = 15/127 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            Q   D+   QR     +    +  + + +S +     +++              G+ Y 
Sbjct: 147 YQNAVDMILKQRDYTGAIAAFQKFQKDFPDSTFTPNTHYWL--------------GQLYF 192

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + +   A+  F  V+ +Y D+    +A+ +L +         +A++    +   YP   
Sbjct: 193 AKKQDKEAVKSFAAVV-SYKDSNKRSDALVKLGDIATRNNNATQAKKYYQQVVTEYPNSA 251

Query: 262 WARYVET 268
            A+  +T
Sbjct: 252 SAKVAKT 258



 Score = 38.9 bits (90), Expect = 0.81,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 56/147 (38%), Gaps = 17/147 (11%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
            + S+D      TDV  ++  Y+ AV   LK+++++ A   F +  +DFP +     +  
Sbjct: 127 SEGSKDASGTFSTDVD-EQTAYQNAVDMILKQRDYTGAIAAFQKFQKDFPDSTFTPNTHY 185

Query: 99  MSAFVQYSAGKYQQAA---SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
               + ++  + ++A    +    Y      S  +              + D+       
Sbjct: 186 WLGQLYFAKKQDKEAVKSFAAVVSYKDSNKRSDAL------------VKLGDIATRNNNA 233

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYV 182
               +Y  ++V  Y NS   K A+ ++
Sbjct: 234 TQAKKYYQQVVTEYPNSASAKVAKTHL 260


>gi|255262157|ref|ZP_05341499.1| TPR repeat-containing protein [Thalassiobium sp. R2A62]
 gi|255104492|gb|EET47166.1| TPR repeat-containing protein [Thalassiobium sp. R2A62]
          Length = 187

 Score = 42.0 bits (98), Expect = 0.095,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 46/133 (34%), Gaps = 18/133 (13%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLG 117
           +  +    L  ++   A ++F+      P FA   A ++        +  G+Y  A    
Sbjct: 70  LVRRGRDALDARDHDAAVDHFSALVDHAPDFAEGYAGRAT-----AYFHEGQYGLAIDDL 124

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
            E + + P      YV  + G++   ++ D+  +Q      L     ++  + N P V  
Sbjct: 125 REVLNRDPNH----YVA-ITGLA--VILEDLGRNQ----DALDGYREVLRIHPNQPEVLV 173

Query: 178 ARFYVTVGRNQLA 190
               +       A
Sbjct: 174 GVERLEALLEGQA 186


>gi|28897836|ref|NP_797441.1| hypothetical protein VP1062 [Vibrio parahaemolyticus RIMD 2210633]
 gi|260361767|ref|ZP_05774792.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus K5030]
 gi|260876996|ref|ZP_05889351.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus AN-5034]
 gi|260899067|ref|ZP_05907508.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus Peru-466]
 gi|28806049|dbj|BAC59325.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308089158|gb|EFO38853.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus Peru-466]
 gi|308093912|gb|EFO43607.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus AN-5034]
 gi|308113270|gb|EFO50810.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus K5030]
          Length = 251

 Score = 42.0 bits (98), Expect = 0.095,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 47/130 (36%), Gaps = 15/130 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            Q   D+   +R     +    +  + Y +S Y               A     +G+ Y 
Sbjct: 137 YQNAVDLILKKRDYTGAIAAFQQFQKDYPDSTYS--------------ANSHYWLGQLYF 182

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + +   A+  F  V+ +Y D+    +A+ +L E         +A++    + + YP   
Sbjct: 183 AKKQDKDAVKSFAAVV-SYKDSNKRADALLKLGEIAERNNNAAQAKKYYQQVVDEYPGSA 241

Query: 262 WARYVETLVK 271
            A+   + +K
Sbjct: 242 SAKLAGSKLK 251



 Score = 40.9 bits (95), Expect = 0.17,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 41/124 (33%), Gaps = 23/124 (18%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               Y  A +  +++   YP+S      +Y +G  Y    +D        K  ++  + +
Sbjct: 146 KKRDYTGAIAAFQQFQKDYPDSTYSANSHYWLGQLYFAKKQD--------KDAVKSFAAV 197

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           V  Y +S     A   +       A +     +          A   +Q V+  Y  +  
Sbjct: 198 VS-YKDSNKRADALLKLGEI----AERNNNAAQ----------AKKYYQQVVDEYPGSAS 242

Query: 226 AEEA 229
           A+ A
Sbjct: 243 AKLA 246



 Score = 35.5 bits (81), Expect = 8.1,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 49/138 (35%), Gaps = 16/138 (11%)

Query: 50  SVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY--- 105
             T    ++  Y+ AV   LK+++++ A   F Q  +D+P +  +  S      + +   
Sbjct: 126 KYTPNVDEQTAYQNAVDLILKKRDYTGAIAAFQQFQKDYPDSTYSANSHYWLGQLYFAKK 185

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
                 ++ +    Y      +K  D        +  ++      +  A     +Y  ++
Sbjct: 186 QDKDAVKSFAAVVSYKD---SNKRAD--------ALLKLGEIAERNNNAA-QAKKYYQQV 233

Query: 166 VERYTNSPYVKGARFYVT 183
           V+ Y  S   K A   + 
Sbjct: 234 VDEYPGSASAKLAGSKLK 251


>gi|260829076|ref|XP_002609488.1| hypothetical protein BRAFLDRAFT_95582 [Branchiostoma floridae]
 gi|229294845|gb|EEN65498.1| hypothetical protein BRAFLDRAFT_95582 [Branchiostoma floridae]
          Length = 816

 Score = 42.0 bits (98), Expect = 0.096,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 21/56 (37%), Gaps = 4/56 (7%)

Query: 60  VYEKAVLFLKEQNFSKAYE-YFNQCSRDFPFAGVARKSLL-MSAFVQYSAGKYQQA 113
           +Y    L   +  + +A E Y     R  P +  A +SL  M     +   +  +A
Sbjct: 593 IYNLGRLQHDQGRYVEAIETYLEAIRRR-P-SHYAPQSLYNMLGESLFKNSQLAEA 646


>gi|15641836|ref|NP_231468.1| hypothetical protein VC1834 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121585788|ref|ZP_01675582.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121727623|ref|ZP_01680726.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|147673656|ref|YP_001217370.1| hypothetical protein VC0395_A1427 [Vibrio cholerae O395]
 gi|153800377|ref|ZP_01954963.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|153819813|ref|ZP_01972480.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|153828571|ref|ZP_01981238.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|227081963|ref|YP_002810514.1| hypothetical protein VCM66_1757 [Vibrio cholerae M66-2]
 gi|229508069|ref|ZP_04397574.1| hypothetical protein VCF_003303 [Vibrio cholerae BX 330286]
 gi|229511692|ref|ZP_04401171.1| hypothetical protein VCE_003101 [Vibrio cholerae B33]
 gi|229515214|ref|ZP_04404674.1| hypothetical protein VCB_002871 [Vibrio cholerae TMA 21]
 gi|229518831|ref|ZP_04408274.1| hypothetical protein VCC_002856 [Vibrio cholerae RC9]
 gi|229529143|ref|ZP_04418533.1| hypothetical protein VCG_002236 [Vibrio cholerae 12129(1)]
 gi|229607630|ref|YP_002878278.1| hypothetical protein VCD_002542 [Vibrio cholerae MJ-1236]
 gi|254848920|ref|ZP_05238270.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255745404|ref|ZP_05419353.1| TPR repeat containing exported protein [Vibrio cholera CIRS 101]
 gi|262149047|ref|ZP_06028190.1| TPR repeat-containing protein [Vibrio cholerae INDRE 91/1]
 gi|262169823|ref|ZP_06037514.1| TPR repeat-containing protein [Vibrio cholerae RC27]
 gi|298498127|ref|ZP_07007934.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|9656361|gb|AAF94982.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121549926|gb|EAX59944.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121630010|gb|EAX62417.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|124124003|gb|EAY42746.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|126509652|gb|EAZ72246.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|146315539|gb|ABQ20078.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|148875966|gb|EDL74101.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|227009851|gb|ACP06063.1| conserved hypothetical protein [Vibrio cholerae M66-2]
 gi|227013733|gb|ACP09943.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|229332917|gb|EEN98403.1| hypothetical protein VCG_002236 [Vibrio cholerae 12129(1)]
 gi|229343520|gb|EEO08495.1| hypothetical protein VCC_002856 [Vibrio cholerae RC9]
 gi|229347919|gb|EEO12878.1| hypothetical protein VCB_002871 [Vibrio cholerae TMA 21]
 gi|229351657|gb|EEO16598.1| hypothetical protein VCE_003101 [Vibrio cholerae B33]
 gi|229355574|gb|EEO20495.1| hypothetical protein VCF_003303 [Vibrio cholerae BX 330286]
 gi|229370285|gb|ACQ60708.1| hypothetical protein VCD_002542 [Vibrio cholerae MJ-1236]
 gi|254844625|gb|EET23039.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255737234|gb|EET92630.1| TPR repeat containing exported protein [Vibrio cholera CIRS 101]
 gi|262022057|gb|EEY40767.1| TPR repeat-containing protein [Vibrio cholerae RC27]
 gi|262031147|gb|EEY49768.1| TPR repeat-containing protein [Vibrio cholerae INDRE 91/1]
 gi|297542460|gb|EFH78510.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|327484389|gb|AEA78796.1| TPR repeat containing exported protein; Putative periplasmic
           protein contains a protein prenylyltransferase domain
           [Vibrio cholerae LMA3894-4]
          Length = 254

 Score = 42.0 bits (98), Expect = 0.096,   Method: Composition-based stats.
 Identities = 20/146 (13%), Positives = 57/146 (39%), Gaps = 10/146 (6%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
              S+ +    + +    ++  Y+ AV   LK+++++ A   F +   D+P +  +  + 
Sbjct: 118 PTSSNDEAAQGTFSSDANEQAAYQNAVDLILKKRDYAGAIAAFQKFQTDYPNSTFSANAH 177

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
                + ++  + ++AA      ++    +K  D       +     + D+       + 
Sbjct: 178 YWLGQLYFAKKEDKEAAKSFAAVVSDKGSNKRAD------ALV---KLGDIAKRNNNAEQ 228

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVT 183
             ++  + V+ Y +S   K A+  + 
Sbjct: 229 ARKFYQQAVDEYPDSASAKIAKENLK 254



 Score = 38.9 bits (90), Expect = 0.75,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 46/130 (35%), Gaps = 15/130 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            Q   D+   +R     +    +    Y NS +   A +++              G+ Y 
Sbjct: 140 YQNAVDLILKKRDYAGAIAAFQKFQTDYPNSTFSANAHYWL--------------GQLYF 185

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + E   A   F  V+++   +    +A+ +L +        ++AR+      + YP   
Sbjct: 186 AKKEDKEAAKSFAAVVSD-KGSNKRADALVKLGDIAKRNNNAEQARKFYQQAVDEYPDSA 244

Query: 262 WARYVETLVK 271
            A+  +  +K
Sbjct: 245 SAKIAKENLK 254



 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 39/126 (30%), Gaps = 27/126 (21%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               Y  A +  +++ T YP S      +Y +G  Y     D        K   +  + +
Sbjct: 149 KKRDYAGAIAAFQKFQTDYPNSTFSANAHYWLGQLYFAKKED--------KEAAKSFAAV 200

Query: 166 VERYTNSPYVKGARFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
           V    ++     A   +     RN  A +                A   +Q  +  Y D+
Sbjct: 201 VSDKGSNKRA-DALVKLGDIAKRNNNAEQ----------------ARKFYQQAVDEYPDS 243

Query: 224 EHAEEA 229
             A+ A
Sbjct: 244 ASAKIA 249


>gi|297183091|gb|ADI19235.1| hypothetical protein [uncultured delta proteobacterium
           HF0200_14D13]
          Length = 906

 Score = 42.0 bits (98), Expect = 0.097,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 18/53 (33%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
           Y       + + + KA  +F +     P +    +     A   Y   K+ +A
Sbjct: 518 YVLGFSSHEAKEWGKAVLFFKRLIDQHPQSPFREEGYYRLADSYYQQEKHSEA 570



 Score = 41.6 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 63/185 (34%), Gaps = 35/185 (18%)

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYP-------ESKNV-DYVYYLVGMSYAQMIRDVP 149
           L+  +  Y  G + QA    +      P        ++ + +   +L   +     RD  
Sbjct: 407 LIQGYALYQTGDHLQAYGALQ------PALATSQGGNEWIWEQALFLR-STIELRSRDFK 459

Query: 150 YDQRATKLMLQYMSRIVERYTNSPY-----VKGARFYVTVGRNQLAAKEVEI------GR 198
              R  + +L        R   S Y     V        +   QL  ++V        GR
Sbjct: 460 KADRHLQELLSKFEESNRR---SEYYYWLGVLQLEQRKPLRGVQLGMRQVRPDGPRGDGR 516

Query: 199 YYL------KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           +Y+      +  E+  A+  F+ ++  +  +   EE   RL ++Y       EA  V S 
Sbjct: 517 WYVLGFSSHEAKEWGKAVLFFKRLIDQHPQSPFREEGYYRLADSYYQQEKHSEADRVFSE 576

Query: 253 IQERY 257
            ++ +
Sbjct: 577 YRKEF 581



 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 72/194 (37%), Gaps = 24/194 (12%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           +  +++ ++ ++ + L+ ++F KA  +  +    F  +    +       +Q    K  +
Sbjct: 438 EWIWEQALFLRSTIELRSRDFKKADRHLQELLSKFEESNRRSEYYYWLGVLQLEQRKPLR 497

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
              LG   +   P+    D  +Y++G S         ++ +     + +  R+++++  S
Sbjct: 498 GVQLGMRQVR--PDGPRGDGRWYVLGFS--------SHEAKEWGKAVLFFKRLIDQHPQS 547

Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
           P+ +   + +                 Y ++ ++  A   F      +         + R
Sbjct: 548 PFREEGYYRL--------------ADSYYQQEKHSEADRVFSEYRKEFQVLSKPVRVIER 593

Query: 233 LVEAYVALALMDEA 246
            V+  + L  ++EA
Sbjct: 594 QVQNLMKLGKLEEA 607


>gi|145352000|ref|XP_001420347.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580581|gb|ABO98640.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 576

 Score = 42.0 bits (98), Expect = 0.097,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 56/186 (30%), Gaps = 24/186 (12%)

Query: 17  YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
           YQ+ K  +     I    +  +      ++   +  +   + E   K    LK+  +  A
Sbjct: 410 YQMDKMLIGAARQIVPALVEAYPDILEAELERLNPPEAPGESEK-TKGNEALKQGKYQDA 468

Query: 77  YEYFNQCSRDFPFAGV--ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
            EY++      P + +  A +++          G YQ A     E I       +  YV 
Sbjct: 469 IEYYSVAIGKNPKSKIFVANRAM-----AHLKLGNYQLAEDDCTEAIKL-----DARYVK 518

Query: 135 -YLVGMSYAQMIRDVPYD-QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
            YL         R             L      +    N+   K   + +      +A  
Sbjct: 519 AYLR--------RAAARSVAGNYLEALMDYEEALRFEPNNSDAKREVYRMKKIIG-MADP 569

Query: 193 EVEIGR 198
            +++G 
Sbjct: 570 GMDVGD 575


>gi|108759977|ref|YP_631572.1| putative adventurous gliding protein T [Myxococcus xanthus DK 1622]
 gi|108463857|gb|ABF89042.1| putative adventurous gliding protein T [Myxococcus xanthus DK 1622]
          Length = 499

 Score = 42.0 bits (98), Expect = 0.097,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 58/217 (26%), Gaps = 29/217 (13%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
             +             +  +  A+   +  +   A + F     + P +     +     
Sbjct: 59  PEQKPVPPPAQKSGSAQSAFAAALQSYEAGDLDGARKGFEAVVDELPQS---LNAQFNLG 115

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
            +    G+   A    E+ +   P    V  V  L G+ Y          Q      +  
Sbjct: 116 VIAERQGRPDDARVAYEKVLLLDPAH--VPAVVNL-GVMY--------RAQGRLDEAIAL 164

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
             R ++      Y       +++   ++A           K  E  AA  R   VL    
Sbjct: 165 FQRALKT-PGREYDASLLNSLSITY-RVAG----------KLDESEAAARR---VLVRNK 209

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           D   A + +A +  A     L +          E  P
Sbjct: 210 DDPGAYKNLAHVAYAREKYRLAELLAGTARKHSENDP 246


>gi|324021716|ref|NP_001191213.1| serine/threonine-protein phosphatase 5 isoform 2 [Homo sapiens]
          Length = 477

 Score = 42.0 bits (98), Expect = 0.098,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 49/156 (31%), Gaps = 31/156 (19%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF-- 102
              +   ++   E+  +A  + K +++  A ++++Q     P        +S    A+  
Sbjct: 18  EPPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS---LAYLR 74

Query: 103 --VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
                Y+ G   +A  L ++YI            YY    S   +           +  L
Sbjct: 75  TECYGYALGDATRAIELDKKYIK----------GYYRRAASNMAL--------GKFRAAL 116

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           +    +V+   +      A+         +  K  E
Sbjct: 117 RDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 149


>gi|126327904|ref|XP_001367838.1| PREDICTED: similar to Collagen prolyl 4-hydroxylase alpha III
           subunit [Monodelphis domestica]
          Length = 559

 Score = 42.0 bits (98), Expect = 0.098,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 39/126 (30%), Gaps = 17/126 (13%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK--------AVLFLKEQNFS 74
           AL     +    + G    + + V    VTD+   R+V+            +     ++ 
Sbjct: 154 ALMRLQDVYTLSVKGLAHGAFQRVTGSQVTDLYRPRQVFSLSADDCFHVGKVAYDMGDYY 213

Query: 75  KAYEYFNQCSRDF--PFAGVA-------RKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
            A  +       F   +             +L   AF  + AG    A  L  E++   P
Sbjct: 214 HAISWLEVAVSLFRGSYGEWNTEDEGSLEDALDYLAFAYFQAGNVSNALRLSREFLHYNP 273

Query: 126 ESKNVD 131
            +K V 
Sbjct: 274 NNKRVA 279


>gi|78101457|pdb|2AVP|A Chain A, Crystal Structure Of An 8 Repeat Consensus Tpr Superhelix
          Length = 70

 Score = 42.0 bits (98), Expect = 0.098,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 26/67 (38%), Gaps = 3/67 (4%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y     + K+ ++ +A EY+ +     P +    ++        Y  G Y +A    ++ 
Sbjct: 7   YNLGNAYYKQGDYDEAIEYYQKALELDPRSA---EAWYNLGNAYYKQGDYDEAIEYYQKA 63

Query: 121 ITQYPES 127
           +   P S
Sbjct: 64  LELDPRS 70


>gi|237830289|ref|XP_002364442.1| serine/threonine protein phosphatase, putative [Toxoplasma gondii
           ME49]
 gi|211962106|gb|EEA97301.1| serine/threonine protein phosphatase, putative [Toxoplasma gondii
           ME49]
 gi|221507312|gb|EEE32916.1| serine/threonine protein phosphatase, putative [Toxoplasma gondii
           VEG]
          Length = 548

 Score = 42.0 bits (98), Expect = 0.099,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 49/172 (28%), Gaps = 36/172 (20%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVAR-----KSLL-MSAFVQYS 106
           V     +  +   F K + F +A E +             A+     + LL   AF Q +
Sbjct: 58  VAEAESLKTEGNEFFKTRLFHQAVEKYTAAIDLICSNTMTAQTKQILQVLLCNRAFCQIN 117

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
              Y  A    E  I   P        YY  G +Y  + R         K   +   R++
Sbjct: 118 LENYGSAVVDAERVIQMNPLFAK---AYYRRGCAYCCLSR--------YKKAQKDFERVI 166

Query: 167 ERY--TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                 +          +   + Q+            +   + AAI   Q +
Sbjct: 167 ALSATPD----PSVVSRLNECKKQI------------RLEAFAAAIETQQTM 202


>gi|197335090|ref|YP_002155725.1| Tol system periplasmic component YbgF [Vibrio fischeri MJ11]
 gi|197316580|gb|ACH66027.1| Tol system periplasmic component YbgF [Vibrio fischeri MJ11]
          Length = 257

 Score = 42.0 bits (98), Expect = 0.099,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 46/130 (35%), Gaps = 15/130 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            Q   D+   ++      +     V  Y +S Y   A +++              G+ Y 
Sbjct: 141 YQNAVDLILKEKNYAGATKAFQEFVTAYPDSVYSSNAHYWL--------------GQLYF 186

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            +   V A   F  V+ +Y+D+    +A+ +L E          A++    +   YP   
Sbjct: 187 AQKNDVEAAKSFAKVV-SYTDSNKRADALLKLGEVAKRNNNDAAAKKYYQKVVSEYPDST 245

Query: 262 WARYVETLVK 271
            A+   + +K
Sbjct: 246 TAKTAASKLK 255



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 46/132 (34%), Gaps = 14/132 (10%)

Query: 57  QREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           +   Y+ AV   LKE+N++ A + F +    +P +  +  +      + ++     +A  
Sbjct: 137 ENAAYQNAVDLILKEKNYAGATKAFQEFVTAYPDSVYSSNAHYWLGQLYFAQKNDVEA-- 194

Query: 116 LGEEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
             + +     Y +S         +G    +   D            +Y  ++V  Y +S 
Sbjct: 195 -AKSFAKVVSYTDSNKRADALLKLGEVAKRNNNDA--------AAKKYYQKVVSEYPDST 245

Query: 174 YVKGARFYVTVG 185
             K A   +   
Sbjct: 246 TAKTAASKLKSL 257


>gi|150024239|ref|YP_001295065.1| BatE protein [Flavobacterium psychrophilum JIP02/86]
 gi|149770780|emb|CAL42245.1| BatE protein [Flavobacterium psychrophilum JIP02/86]
          Length = 247

 Score = 42.0 bits (98), Expect = 0.099,   Method: Composition-based stats.
 Identities = 10/83 (12%), Positives = 27/83 (32%), Gaps = 9/83 (10%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK-SLL--MSAFVQYSA 107
           +T   + +  ++K     ++ N+ +A   +    +        ++ + L        Y  
Sbjct: 11  ITQTFWAQTAFDKGNNLYQKGNYQEAITVYESVVKS------GQQSAELYFNLGNCYYKL 64

Query: 108 GKYQQAASLGEEYITQYPESKNV 130
            K   A    E+ +   P    +
Sbjct: 65  NKVAPAIFNFEKALLLNPNDSEI 87


>gi|123509584|ref|XP_001329892.1| TPR Domain containing protein [Trichomonas vaginalis G3]
 gi|121912942|gb|EAY17757.1| TPR Domain containing protein [Trichomonas vaginalis G3]
          Length = 264

 Score = 42.0 bits (98), Expect = 0.099,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 34/106 (32%), Gaps = 14/106 (13%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCS---RDFPFAGVARKSLLMS 100
           D+  +   D     ++  K    L   N  +A  Y+            F     ++    
Sbjct: 57  DLIPEPKYDTDAANKLKVKGNEALSAGNVDEAIRYYTEAIKVDPSQHIF--YCNRAA--- 111

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
                + G YQ A    E+ I+  P        Y  +G++  ++ +
Sbjct: 112 --AYTTKGDYQAAIDDSEKAISLNPTFPKS---YSRLGLALYKLNK 152


>gi|115371978|ref|ZP_01459290.1| branched-chain amino acid transport system substrate-binding
           protein, putative [Stigmatella aurantiaca DW4/3-1]
 gi|115370943|gb|EAU69866.1| branched-chain amino acid transport system substrate-binding
           protein, putative [Stigmatella aurantiaca DW4/3-1]
          Length = 713

 Score = 42.0 bits (98), Expect = 0.099,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 71/228 (31%), Gaps = 47/228 (20%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE--YIT-QYPESK 128
           +  +A E      + +P    ++++L  +  + Y A  Y  A     E  +    YP+++
Sbjct: 72  DRKRAAESLLVVRKTYPETTASQEALYRAGVLFYEAEDYANARKSFNELLFENPIYPQAQ 131

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN- 187
           +V              +     +  A +   Q +S + ER             + +  + 
Sbjct: 132 DV-----------KLKLARSALEVGAYRDAYQTLSSLAER-------AEGAERLKLLEDA 173

Query: 188 -QLAAK----------EVEIGRYYLKRGEYVAAIPRFQLVLA---NYSDAEHAEEAM--- 230
            + A            EVE+        E  AA  R + V+    ++ D     E +   
Sbjct: 174 SRAAQGAGLYSSALTLEVELAEQAKTPEEQAAAAKRLEQVVEGRADFVDIARVAEGLSPR 233

Query: 231 --------ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
                    +L   Y  L       E ++      P   +A   + L+
Sbjct: 234 HPAWPILTFKLARIYYHLRDWTRLEETLNRFLLEAPSHPFAAQAKELL 281



 Score = 36.2 bits (83), Expect = 5.5,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 26/67 (38%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                 Q  +Y   VLF + ++++ A + FN+   + P    A+   L  A      G Y
Sbjct: 88  PETTASQEALYRAGVLFYEAEDYANARKSFNELLFENPIYPQAQDVKLKLARSALEVGAY 147

Query: 111 QQAASLG 117
           + A    
Sbjct: 148 RDAYQTL 154


>gi|71278988|ref|YP_270904.1| lysM domain-containing protein [Colwellia psychrerythraea 34H]
 gi|71144728|gb|AAZ25201.1| lysM domain protein [Colwellia psychrerythraea 34H]
          Length = 524

 Score = 42.0 bits (98), Expect = 0.099,   Method: Composition-based stats.
 Identities = 41/285 (14%), Positives = 87/285 (30%), Gaps = 62/285 (21%)

Query: 19  LYKFAL-TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK----AVLFLKEQNF 73
           + K+ + T+  +I++  L G   QS  +     V +   + E+        + +LK  + 
Sbjct: 1   MAKYLISTLLTAISMTLLSGCVTQSFENNE-PIVKNQANRDEMAATRISLGLGYLKMGDM 59

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA--GKYQQAASLGEE----------YI 121
           S+A     +  +   F+       + +AF  Y    G+   A    E+           +
Sbjct: 60  SQAKLNLEKAKK---FSP--NLVQVHTAFAHYYETVGEGTLAIESFEQALSIKADSADTL 114

Query: 122 TQY------PESKNVDYVYYLVGMS---------YAQMIRDVPYDQRATKLMLQYMSRIV 166
             Y        +     V +L  ++           + +          +    Y+++ +
Sbjct: 115 NNYGVFLCRQGNVAAAEVQFLKAIAVPSYLLVSESYENLASCYLQNDNFEKAEMYLNKSI 174

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
               N        F +   +                 G Y  A  R+   L  +  +   
Sbjct: 175 YHSPN---RTSTLFQMVRLQ--------------YAMGNYKEA-KRY---LQKFERSTQR 213

Query: 227 EEA--MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
             A  ++   + Y  L     AR   +++ + YPQ  W      L
Sbjct: 214 FTANSLSLAYKLYWKLGQRRTARNYANMLVKMYPQS-WEGKQYLL 257


>gi|296448864|ref|ZP_06890696.1| tol-pal system protein YbgF [Methylosinus trichosporium OB3b]
 gi|296253630|gb|EFH00825.1| tol-pal system protein YbgF [Methylosinus trichosporium OB3b]
          Length = 197

 Score = 42.0 bits (98), Expect = 0.099,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 30/66 (45%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           + +G  +  R  +  A  +F  +   +  +  A EAM RL ++  A+   ++A    + I
Sbjct: 114 LYLGESFFLRERHREAAEKFLEISTKFPSSPQAPEAMLRLGQSLHAIGAKEQACASFNEI 173

Query: 254 QERYPQ 259
             +YP 
Sbjct: 174 AVKYPG 179



 Score = 39.3 bits (91), Expect = 0.56,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 38/111 (34%), Gaps = 10/111 (9%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYV-YYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
             G+Y+ A      ++ +  +SK       YL G S+    R         +   +    
Sbjct: 85  RLGEYEAAEKGFSGFLAKNAKSKLAPQATLYL-GESFFLRERH--------REAAEKFLE 135

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           I  ++ +SP    A   +    + + AKE     +     +Y  A  R + 
Sbjct: 136 ISTKFPSSPQAPEAMLRLGQSLHAIGAKEQACASFNEIAVKYPGAPARVKE 186



 Score = 35.5 bits (81), Expect = 7.6,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 1/77 (1%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           + +  Q  +Y     F   +   +A E F + S  FP +  A +++L      ++ G  +
Sbjct: 106 SKLAPQATLY-LGESFFLRERHREAAEKFLEISTKFPSSPQAPEAMLRLGQSLHAIGAKE 164

Query: 112 QAASLGEEYITQYPESK 128
           QA +   E   +YP + 
Sbjct: 165 QACASFNEIAVKYPGAP 181


>gi|158425009|ref|YP_001526301.1| von Willebrand factor type A [Azorhizobium caulinodans ORS 571]
 gi|158331898|dbj|BAF89383.1| von Willebrand factor type A [Azorhizobium caulinodans ORS 571]
          Length = 725

 Score = 42.0 bits (98), Expect = 0.099,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 10/70 (14%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           +A    K  ++ KA E +++     P            A     AGK   A    +E + 
Sbjct: 410 QASALYKAGDYEKAAEAYSRL----PNGAY------NQANALARAGKLDDAVKAYDEALK 459

Query: 123 QYPESKNVDY 132
           Q P++ +  Y
Sbjct: 460 QNPDNADAIY 469


>gi|108761475|ref|YP_630180.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622]
 gi|108465355|gb|ABF90540.1| MJ0042 family finger-like domain/tetratricopeptide repeat protein
            [Myxococcus xanthus DK 1622]
          Length = 1628

 Score = 42.0 bits (98), Expect = 0.099,   Method: Composition-based stats.
 Identities = 19/143 (13%), Positives = 45/143 (31%), Gaps = 28/143 (19%)

Query: 52   TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS----- 106
             D R  R +      +     ++ A + +            A K+     +V Y      
Sbjct: 1507 ADPRRTRVLGSIGDAYFAAARWNDAIKRYQS----------ALKADPKLTYVYYKVARAF 1556

Query: 107  --AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
                ++ +A     +  +   +S+N    YY +G +Y +  +         +  +Q    
Sbjct: 1557 TEQAQHAKAIDWYRKATSL--DSEN-PMAYYYLGFAYKERNKR--------REAVQAFKD 1605

Query: 165  IVERYTNSPYVKGARFYVTVGRN 187
             + R  ++   K     +   +N
Sbjct: 1606 YLSRKPDATDRKDIEDEIYDLQN 1628


>gi|3114755|emb|CAA76671.1| competence lipoprotein [Campylobacter jejuni]
          Length = 164

 Score = 42.0 bits (98), Expect = 0.099,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 38/106 (35%), Gaps = 9/106 (8%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
           L++ A       +Y+ A    +EY  ++  S+N DY+ YL   +          +Q    
Sbjct: 20  LIILAQAHMDEEEYKLAEFYLDEYNKKFGNSRNADYIRYLKIKAKFDAFAVPNRNQALML 79

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
              + +   ++ Y  + Y    +  +T            +  +YL 
Sbjct: 80  ESQKEIDTFLKDYPYTEYEPLVQTMLTK---------FNLAVFYLN 116


>gi|71023563|ref|XP_762011.1| hypothetical protein UM05864.1 [Ustilago maydis 521]
 gi|46101576|gb|EAK86809.1| hypothetical protein UM05864.1 [Ustilago maydis 521]
          Length = 706

 Score = 42.0 bits (98), Expect = 0.099,   Method: Composition-based stats.
 Identities = 16/127 (12%), Positives = 36/127 (28%), Gaps = 20/127 (15%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMS 100
           +D       D       Y +  +      F  A + + +       F F+       +  
Sbjct: 481 KDFDKAIEADAEDPDIYYHRGQVNFILGEFEAAIKDYEKSTSLDDTFIFS------QVQY 534

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           A   Y       + +   + +  +  S    Y YY           ++  DQ+  +  + 
Sbjct: 535 AVAHYKNNNIGHSTAAFRKLLRNFDTSSEA-YNYY----------GELLLDQQKFEEAMD 583

Query: 161 YMSRIVE 167
              + +E
Sbjct: 584 KFDKAIE 590


>gi|315608112|ref|ZP_07883105.1| tetratricopeptide (TPR) domain protein [Prevotella buccae ATCC
           33574]
 gi|315250581|gb|EFU30577.1| tetratricopeptide (TPR) domain protein [Prevotella buccae ATCC
           33574]
          Length = 252

 Score = 41.6 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 47/128 (36%), Gaps = 15/128 (11%)

Query: 72  NFSKAYEYFNQ-CSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           N+++A +Y ++   +   F+    +S     +A   +  G+Y +A  L E+ +    E++
Sbjct: 77  NYAEAIQYLDKAIPQLSAFSPH-ERSFYYWSNAESHFLLGRYDEAIPLYEKMLNLCYENE 135

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
             D  +Y +G  +              +       +    Y  + Y    R  +    N 
Sbjct: 136 KAD-AFYRLGFCHMFA--------EDWQKACDNYKQAAHYY--TYYRPEERARLVQINNM 184

Query: 189 LAAKEVEI 196
           +A  E  I
Sbjct: 185 IAGCEKHI 192


>gi|260768864|ref|ZP_05877798.1| TPR repeat-containing protein [Vibrio furnissii CIP 102972]
 gi|260616894|gb|EEX42079.1| TPR repeat-containing protein [Vibrio furnissii CIP 102972]
 gi|315180557|gb|ADT87471.1| hypothetical protein vfu_A02340 [Vibrio furnissii NCTC 11218]
          Length = 260

 Score = 41.6 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 55/146 (37%), Gaps = 10/146 (6%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
           +   S ++   + +    ++  YE AV   LK+++++ A   F Q  +D+P +  A  S 
Sbjct: 124 DTSQSEEIPAGTFSSDADEQAAYENAVDLILKKRDYAGAIAAFQQFQKDYPNSNFASNSH 183

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
                + ++  +  +A       +     +K  D             + D+         
Sbjct: 184 YWLGQLYFAKKQDPEAVKSFAAVLAYKDSNKRAD---------AMVKLGDIAKRNNNAAQ 234

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVT 183
             +Y  ++V+ Y +S   K A+  + 
Sbjct: 235 AKKYYQQVVDEYPDSASAKVAKENLK 260



 Score = 39.7 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 40/125 (32%), Gaps = 25/125 (20%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               Y  A +  +++   YP S      +Y +G  Y    +D           ++  + +
Sbjct: 155 KKRDYAGAIAAFQQFQKDYPNSNFASNSHYWLGQLYFAKKQDP--------EAVKSFAAV 206

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA-AIPRFQLVLANYSDAE 224
           +  Y +S     A   +                   KR    A A   +Q V+  Y D+ 
Sbjct: 207 L-AYKDSNKRADAMVKLGDI---------------AKRNNNAAQAKKYYQQVVDEYPDSA 250

Query: 225 HAEEA 229
            A+ A
Sbjct: 251 SAKVA 255



 Score = 39.3 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 44/114 (38%), Gaps = 15/114 (13%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
            +    +  + Y NS +   + +++              G+ Y  + +   A+  F  VL
Sbjct: 162 AIAAFQQFQKDYPNSNFASNSHYWL--------------GQLYFAKKQDPEAVKSFAAVL 207

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           A Y D+    +AM +L +         +A++    + + YP    A+  +  +K
Sbjct: 208 A-YKDSNKRADAMVKLGDIAKRNNNAAQAKKYYQQVVDEYPDSASAKVAKENLK 260


>gi|188997451|ref|YP_001931702.1| Tetratricopeptide TPR_2 repeat protein [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188932518|gb|ACD67148.1| Tetratricopeptide TPR_2 repeat protein [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 297

 Score = 41.6 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 39/255 (15%), Positives = 88/255 (34%), Gaps = 55/255 (21%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
           FF++ +  L+              V D +Y   +YE  + +L   N + A +Y  +  + 
Sbjct: 5   FFALTLAILISSCANPQSYESDLRVGDGKY---LYEMGISYLNSGNNAMAIKYLEEALKS 61

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
           +       +     A     AG++ +A ++    I +YP+   +        ++   ++ 
Sbjct: 62  Y----DKPEVYNALALAYQFAGEFTKAEAIFRLGIDKYPDYPEL--------LTNYGILL 109

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE----------- 195
                Q+     ++Y  + +         + A + + +   QL  +++            
Sbjct: 110 AS---QKKFNEAIKYFEKAINN-PTYSGKEKAYYNLGMVYLQLGKEDLFLSNLEKALMFN 165

Query: 196 ---------IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM----------ARLVEA 236
                    +G YYL   +Y AA    + +L      E+  +A+           RL + 
Sbjct: 166 SNFVNAYITLGDYYL--DKYNAAHN--KEMLKK--TREYYSKALNYVANDPSIYFRLGKV 219

Query: 237 YVALALMDEAREVVS 251
           Y  L   + A+  + 
Sbjct: 220 YHELGDDELAKYYLE 234


>gi|153832523|ref|ZP_01985190.1| Tol system periplasmic component YbgF [Vibrio harveyi HY01]
 gi|148871318|gb|EDL70190.1| Tol system periplasmic component YbgF [Vibrio harveyi HY01]
          Length = 251

 Score = 41.6 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 47/130 (36%), Gaps = 15/130 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            Q   D+   +R     +    +  + Y +S Y               A     +G+ Y 
Sbjct: 137 YQDAVDLILKKRDYTGAIAAFQQFQKDYPDSTYS--------------ANSHYWLGQLYF 182

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + +   A+  F  V+ +Y D+    +A+ +L +         +A++    + + YP   
Sbjct: 183 AKKQDKEAVKSFAAVV-SYKDSNKRADALVKLGDIAERNKNDAQAKKYYQQVVDEYPGSA 241

Query: 262 WARYVETLVK 271
            A+   + +K
Sbjct: 242 SAKVAASKLK 251



 Score = 38.6 bits (89), Expect = 0.95,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 42/124 (33%), Gaps = 23/124 (18%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               Y  A +  +++   YP+S      +Y +G  Y    +D        K  ++  + +
Sbjct: 146 KKRDYTGAIAAFQQFQKDYPDSTYSANSHYWLGQLYFAKKQD--------KEAVKSFAAV 197

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           V  Y +S     A   +     +    + +  +YY             Q V+  Y  +  
Sbjct: 198 VS-YKDSNKRADALVKLGDIAER-NKNDAQAKKYY-------------QQVVDEYPGSAS 242

Query: 226 AEEA 229
           A+ A
Sbjct: 243 AKVA 246


>gi|126725521|ref|ZP_01741363.1| hypothetical protein RB2150_04933 [Rhodobacterales bacterium
           HTCC2150]
 gi|126704725|gb|EBA03816.1| hypothetical protein RB2150_04933 [Rhodobacterales bacterium
           HTCC2150]
          Length = 271

 Score = 41.6 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 49/157 (31%), Gaps = 25/157 (15%)

Query: 34  FLVGWERQSSRDVYLDSVTDVR---YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
            L G    +++     S T       +   +E+A   L   + + A   F+     +P +
Sbjct: 122 TLGGVSTGATQPTVAPSTTGPELAMSESGDFERAKTKLANGDSAGASIDFSTFLETYPGS 181

Query: 91  GVARKSLLMSAFVQYSAGKYQQAA----SLGEEYITQYPESKN---VDYVYYLVGMSYAQ 143
            +  +         Y  G+  +A     +    ++  +             + +G+   +
Sbjct: 182 PLTYEVQ-------YYLGEALEAQSQNKAAARAFLNSFSGDPQGALAPDALFRIGV-NLE 233

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
            +  VP             S +  RY N+  V  A+ 
Sbjct: 234 ALGQVP-------DACSMWSELGLRYPNASAVIQAQA 263



 Score = 40.5 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 32/104 (30%), Gaps = 14/104 (13%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
                S  +E Y  SP     ++Y+       +                 AA   F    
Sbjct: 167 ASIDFSTFLETYPGSPLTYEVQYYLGEALEAQSQN--------------KAAARAFLNSF 212

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +       A +A+ R+     AL  + +A  + S +  RYP   
Sbjct: 213 SGDPQGALAPDALFRIGVNLEALGQVPDACSMWSELGLRYPNAS 256


>gi|320159497|ref|YP_004172721.1| hypothetical protein ANT_00870 [Anaerolinea thermophila UNI-1]
 gi|319993350|dbj|BAJ62121.1| hypothetical protein ANT_00870 [Anaerolinea thermophila UNI-1]
          Length = 409

 Score = 41.6 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 46/268 (17%), Positives = 81/268 (30%), Gaps = 60/268 (22%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMS 100
           ++  +++ + T  R      ++A  F  E  F++A   +      D           L  
Sbjct: 42  NTPPLFVPTPTPTRSPESFLQEARAFAAEGRFTQAEAAYQQALQAD----PKNITIYLEL 97

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNV----DYVY-----YL--------------- 136
           A +Q   GKY +A    E  I   P S        +       YL               
Sbjct: 98  ARLQALYGKYAEAQKNAENAILLNPNSSLAHAIHGWALGLQGEYLPAQAELNKAIEIEPG 157

Query: 137 VGMSYAQMIRDVPY-------DQRATKLMLQYMSRIVERYTN---------------SPY 174
            G++YA +   +         D    +  ++   + VE   +               S Y
Sbjct: 158 NGLAYAYLAEVLALQKIEGKDDPTTLEKAIEASRKAVELAPDQMESYRARGYVLEITSNY 217

Query: 175 VKG--ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA--EHAEEAM 230
                A        + LA   + +GR Y  +  Y  AI  F   +A   D    + E A+
Sbjct: 218 ADAVVAFQQAIALNDNLADLHLALGRNYKAQDIYDKAIEEFNKAIALRPDDPRPYVETAL 277

Query: 231 ARLVEAYVALALMDEAREVVSLIQERYP 258
                 Y+      +A +      ++ P
Sbjct: 278 -----TYLRYGEYAKAAQYAEQAIQQDP 300


>gi|322421634|ref|YP_004200857.1| family 2 glycosyl transferase [Geobacter sp. M18]
 gi|320128021|gb|ADW15581.1| glycosyl transferase family 2 [Geobacter sp. M18]
          Length = 607

 Score = 41.6 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 33/100 (33%), Gaps = 8/100 (8%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
            D +   E Y+ +   + E + + A    ++    +P    A  +    A + Y  G  +
Sbjct: 450 EDEQSAEERYQTSQDLVAEGDLAAAEAVLHKIIALYP--EFAP-AHNDLAVLAYQHGDKE 506

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
            A +  E+     P +       +   ++    I     D
Sbjct: 507 TARARYEKAARLAPGNST-----FQKNLADFYFIEGCDVD 541



 Score = 35.9 bits (82), Expect = 5.8,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 39/121 (32%), Gaps = 13/121 (10%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           +        E Y +   FLK     +A          +P   VA       A V Y AG 
Sbjct: 269 APAAELSANEAYAELAAFLKAGEPQQATTALKNHLARYPQHAVAHN---DLAAVSYQAGD 325

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            +QA     + +   PE ++V    Y   ++    +     D       +    +++E+ 
Sbjct: 326 VEQALQHYRQAVRLEPE-ESV----YQKNLADLLFVETGETD-----EAINIYLKLLEKA 375

Query: 170 T 170
            
Sbjct: 376 P 376


>gi|253996760|ref|YP_003048824.1| hypothetical protein Mmol_1391 [Methylotenera mobilis JLW8]
 gi|253983439|gb|ACT48297.1| Tetratricopeptide TPR_2 repeat protein [Methylotenera mobilis JLW8]
          Length = 405

 Score = 41.6 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 46/128 (35%), Gaps = 24/128 (18%)

Query: 49  DSVTDVRYQREVYEKA----------VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
           D +    YQ+ +Y  A          V++ K   + KA E F        +A  A     
Sbjct: 63  DELAIEAYQKSIYADASFVEAYNGLGVIYAKHGKYQKAIEAFKSALN---YAPAAAHLYS 119

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
              +  Y  G+Y +A +  ++  T  P +         +GM+YA+          +    
Sbjct: 120 NMGYAYYLQGQYAEAVATLKQATTLDPTNLR---ALNNLGMAYAKS--------GSQGES 168

Query: 159 LQYMSRIV 166
           +Q  ++ +
Sbjct: 169 VQAFTQAI 176


>gi|114677997|ref|XP_001167730.1| PREDICTED: protein phosphatase 5, catalytic subunit isoform 2 [Pan
           troglodytes]
          Length = 442

 Score = 41.6 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 49/156 (31%), Gaps = 31/156 (19%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF-- 102
              +   ++   E+  +A  + K +++  A ++++Q     P        +S    A+  
Sbjct: 18  EPPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS---LAYLR 74

Query: 103 --VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
                Y+ G   +A  L ++YI            YY    S   +           +  L
Sbjct: 75  TECYGYALGDATRAIELDKKYIK----------GYYRRAASNMAL--------GKFRAAL 116

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           +    +V+   +      A+         +  K  E
Sbjct: 117 RDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 149


>gi|311745199|ref|ZP_07718984.1| hypothetical protein ALPR1_01835 [Algoriphagus sp. PR1]
 gi|126577722|gb|EAZ81942.1| hypothetical protein ALPR1_01835 [Algoriphagus sp. PR1]
          Length = 275

 Score = 41.6 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 9/66 (13%), Positives = 24/66 (36%), Gaps = 3/66 (4%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D + +  ++   +L ++   + +A E F    +  P      +         + A +  +
Sbjct: 191 DPQNEDAIFNMGILAIQSGQYKRAAERFEDLIKYHPQN---LQGQFYLGVSYFEANQKSK 247

Query: 113 AASLGE 118
           A +  E
Sbjct: 248 AKAQFE 253


>gi|91084547|ref|XP_973113.1| PREDICTED: similar to AGAP003727-PA [Tribolium castaneum]
 gi|270009248|gb|EFA05696.1| translocase of outer membrane 34 [Tribolium castaneum]
          Length = 923

 Score = 41.6 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 15/130 (11%), Positives = 35/130 (26%), Gaps = 20/130 (15%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL-----MSAFVQYSAGKYQQAASL 116
           E+     K  N+  A + + +          +    L       A      GK+++A S 
Sbjct: 11  EEGNAAFKSGNWDSAAKLYTKAINL----ETSESRDLSVFLKNRAAAYLKLGKFEEALSD 66

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            +  +   P         +       Q +  +   + A +   Q          N+  ++
Sbjct: 67  CDRSLEIVPRDPK---ALFRR----CQALEALERFEEAYRDATQIFKD----DPNNRTIQ 115

Query: 177 GARFYVTVGR 186
                +    
Sbjct: 116 PVLERLYRIV 125


>gi|86143683|ref|ZP_01062059.1| BatE, TRP domain containing protein [Leeuwenhoekiella blandensis
           MED217]
 gi|85829726|gb|EAQ48188.1| BatE, TRP domain containing protein [Leeuwenhoekiella blandensis
           MED217]
          Length = 257

 Score = 41.6 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 9/78 (11%), Positives = 26/78 (33%), Gaps = 3/78 (3%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           + +  ++++E       + NF +A + + +          +       A   Y   +   
Sbjct: 24  NAQTPQQLFETGNSQYAQNNFEEAIKNYEKVLDS---GYESAAVYYNLANANYKLNRIAP 80

Query: 113 AASLGEEYITQYPESKNV 130
           +    E+ +   P  K +
Sbjct: 81  SVYNYEKALALKPNDKEI 98


>gi|253701597|ref|YP_003022786.1| type II and III secretion system protein [Geobacter sp. M21]
 gi|251776447|gb|ACT19028.1| type II and III secretion system protein [Geobacter sp. M21]
          Length = 870

 Score = 41.6 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 60/198 (30%), Gaps = 42/198 (21%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +++    +   +    L G                    R  + KA    +E N   A  
Sbjct: 1   MHRPRPILTLMLVALALSGCTSG----------------RTAFSKAEKLEREGNLDAALV 44

Query: 79  YFNQCSRDFP-FAGVARKSLLMS----AFVQYSAGK-------YQQAASLGEEYITQY-- 124
            + + S   P       K LL      A V +  G+       Y +A     E+ + Y  
Sbjct: 45  KYAEVSAANPDIGEYRVK-LLNITETAARVHFKKGEEFFAKNNYDEAL---REFQSAYAM 100

Query: 125 -PES----KNVDYVYYLV-GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            P +       D+V  L    +Y     D   +++  +  +      +E + ++   K  
Sbjct: 101 DPTNVLAKNQADHVLKLRNAQTYLLEGLDFEKNRKP-REAMIAFKHALEFHPSNKEAKEG 159

Query: 179 RFYVTV-GRNQLAAKEVE 195
              +    R +L   E+ 
Sbjct: 160 LDRIIANKRQKLDGFELN 177


>gi|89891520|ref|ZP_01203025.1| putative histidine kinase [Flavobacteria bacterium BBFL7]
 gi|89516294|gb|EAS18956.1| putative histidine kinase [Flavobacteria bacterium BBFL7]
          Length = 591

 Score = 41.6 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 31/81 (38%), Gaps = 4/81 (4%)

Query: 47  YLDSVTDVRYQREVYE-KAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLL--MSAF 102
           Y +   D    +++Y  K     +   + +A  YF +  +  +P     +  ++    A 
Sbjct: 211 YYEKQEDFETLKDLYNSKGQTLKQSNQYDEAIYYFEKALNDFYPIENQEKMGMVTRNLAD 270

Query: 103 VQYSAGKYQQAASLGEEYITQ 123
             Y    YQQ+A L  + I  
Sbjct: 271 AYYLNKNYQQSARLYRDKIRI 291


>gi|53719291|ref|YP_108277.1| hypothetical protein BPSL1666 [Burkholderia pseudomallei K96243]
 gi|52209705|emb|CAH35664.1| hypothetical protein BPSL1666 [Burkholderia pseudomallei K96243]
          Length = 1454

 Score = 41.6 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 50/192 (26%), Gaps = 40/192 (20%)

Query: 63   KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
            +A L L   +F +A   F +     P    A +S         +  +   A +  +  + 
Sbjct: 909  RAELALDTGDFDEALSQFERLREQRP---DAPESYANLIPALAALERRDDAIAALQRALE 965

Query: 123  QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
               +            ++                          ++Y             
Sbjct: 966  LNSKHPG--------ALNNGVQ-----------------FYLRTQQY---DKAMELAQRY 997

Query: 183  TVGRNQLAAKEVEIGRYYLKRGEY---VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                 +LA+     G  Y     Y    A++ R   +        H  EA+  L      
Sbjct: 998  VGAHGELASAHTMCGLVYHNLKAYDRAEASLRRALEIE------PHNAEALFALGTVLER 1051

Query: 240  LALMDEAREVVS 251
            +  + E+ EV+ 
Sbjct: 1052 VDRLAESEEVLR 1063


>gi|50554807|ref|XP_504812.1| YALI0F00286p [Yarrowia lipolytica]
 gi|49650682|emb|CAG77614.1| YALI0F00286p [Yarrowia lipolytica]
          Length = 1442

 Score = 41.6 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 25/79 (31%), Gaps = 12/79 (15%)

Query: 58  REVYEKAVLFLKEQNFSKAYEY----FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
           +E+ ++    +    F  A E           ++       ++ L+    QY       A
Sbjct: 7   KELLKRCKEAISSGRFPDAIEAANDALEVDEENY-------QATLLLGKAQYLNKDNTAA 59

Query: 114 ASLGEEYITQYPESKNVDY 132
            +  ++ I   P    + Y
Sbjct: 60  CAAYDKAIKLEPTQP-LAY 77


>gi|317178432|dbj|BAJ56220.1| paralysed flagella protein [Helicobacter pylori F30]
          Length = 803

 Score = 41.6 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 50/137 (36%), Gaps = 9/137 (6%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             +T   Y    Y +A   +  Q +  A    ++  +++P     +   L+        G
Sbjct: 188 PLLTTKGYDLNAYLEAKKQINSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIALGQLG 247

Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            K      +G ++I  YP   ++  V Y V  +  +            K  ++Y  RI+ 
Sbjct: 248 IKKSLLIDIGTKWIKNYPTDPSIPEVLYYVAKALDEN--------NNYKQAMRYYKRILL 299

Query: 168 RYTNSPYVKGARFYVTV 184
            Y +S Y   A+  + +
Sbjct: 300 EYKDSHYAPLAQMRLAI 316



 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 31/99 (31%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
             + RA   +    ++   + L I     +                +  TD      +Y 
Sbjct: 217 RTISRAFKNYPQTIFKKDLYLLEIIALGQLGIKKSLLIDIGTKWIKNYPTDPSIPEVLYY 276

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
            A    +  N+ +A  Y+ +   ++  +  A  + +  A
Sbjct: 277 VAKALDENNNYKQAMRYYKRILLEYKDSHYAPLAQMRLA 315


>gi|261839992|gb|ACX99757.1| paralysed flagella protein [Helicobacter pylori 52]
          Length = 801

 Score = 41.6 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 50/137 (36%), Gaps = 9/137 (6%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             +T   Y    Y +A   +  Q +  A    ++  +++P     +   L+        G
Sbjct: 186 PLLTTKGYDLNAYLEAKKQINSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIALGQLG 245

Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            K      +G ++I  YP   ++  V Y V  +  +            K  ++Y  RI+ 
Sbjct: 246 IKKSLLIDIGTKWIKNYPTDPSIPEVLYYVAKALDEN--------NNYKQAMRYYKRILL 297

Query: 168 RYTNSPYVKGARFYVTV 184
            Y +S Y   A+  + +
Sbjct: 298 EYKDSHYAPLAQMRLAI 314



 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 31/99 (31%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
             + RA   +    ++   + L I     +                +  TD      +Y 
Sbjct: 215 RTISRAFKNYPQTIFKKDLYLLEIIALGQLGIKKSLLIDIGTKWIKNYPTDPSIPEVLYY 274

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
            A    +  N+ +A  Y+ +   ++  +  A  + +  A
Sbjct: 275 VAKALDENNNYKQAMRYYKRILLEYKDSHYAPLAQMRLA 313


>gi|253699088|ref|YP_003020277.1| hypothetical protein GM21_0439 [Geobacter sp. M21]
 gi|251773938|gb|ACT16519.1| Tetratricopeptide domain protein [Geobacter sp. M21]
          Length = 1090

 Score = 41.6 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 26/54 (48%)

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           AI  +Q +L  Y   E  ++ + ++  +Y  L   ++A  V+  +   +P+  +
Sbjct: 161 AIALYQKLLDKYPHYEGNDQVLYQMSRSYEELGQTEDAMAVMQRMVNDFPRSRY 214



 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/109 (12%), Positives = 36/109 (33%), Gaps = 8/109 (7%)

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
            +A   + +    +P      + L   +      G+ + A ++ +  +  +P S+ +  V
Sbjct: 159 QEAIALYQKLLDKYPHYEGNDQVLYQMSRSYEELGQTEDAMAVMQRMVNDFPRSRYIHEV 218

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
            +           +  +  R           +VE    S Y + A + +
Sbjct: 219 QFRRA--------EYFFTHRQYLEAEPVYKGLVEIGPESSYYELALYKL 259



 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 53/140 (37%), Gaps = 13/140 (9%)

Query: 2   SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY 61
           S VL  A  +     Y+L  +A      + V  LV      SR+ + D++        +Y
Sbjct: 593 SEVLKSAWVVAAHSCYELRNYAEAEAAYVQVLALVP-AEDKSREGFNDNL-----AASIY 646

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++       + +  A ++F +  R    + +   +   +A       +++ AA++   + 
Sbjct: 647 KQGEQANAAKEYRLAADHFLRIGRMAATSKIRVNAEFDAAVALIQLKEWKTAATVLTGFR 706

Query: 122 TQYPESK-------NVDYVY 134
             +P  +        + YVY
Sbjct: 707 GLFPGHEMQPEVTRKLAYVY 726



 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 61/203 (30%), Gaps = 25/203 (12%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           + +A  F   + + +A   +       P +     +L    +  Y    Y +       +
Sbjct: 220 FRRAEYFFTHRQYLEAEPVYKGLVEIGPESSYYELALYKLGWSFYKQELYDEGLH---RF 276

Query: 121 ITQ--YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           I    +  S   D+          Q   D+       K +      + + ++       A
Sbjct: 277 IALLDHKVSTGYDFA---------QTTDDLER-----KRVDDTFRVLSQSFSYLHGAASA 322

Query: 179 RFYVTVGRNQLAAKEVEI----GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
             Y    +N   A E  +    G +Y ++  Y  A   +   ++       + +   R++
Sbjct: 323 VEYFE--KNGKRAYEDRVYGNLGEFYYEKRRYSDAAASYNAFVSRNPFHRASPQFQMRVI 380

Query: 235 EAYVALALMDEAREVVSLIQERY 257
           E ++A        E      + Y
Sbjct: 381 EIHIAGGFPTLVIEAKKEFAKTY 403



 Score = 35.5 bits (81), Expect = 9.1,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 21/59 (35%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++ AV  ++ + +  A          FP   +  +     A+V    G+   AA   E 
Sbjct: 683 FDAAVALIQLKEWKTAATVLTGFRGLFPGHEMQPEVTRKLAYVYKEDGQLALAAGEYER 741


>gi|84999216|ref|XP_954329.1| hypothetical protein [Theileria annulata]
 gi|65305327|emb|CAI73652.1| hypothetical protein, conserved [Theileria annulata]
          Length = 1028

 Score = 41.6 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 33/72 (45%), Gaps = 11/72 (15%)

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
            Y++G +++A    E+ I   P ++N   V ++VG  Y ++++         +  +   S
Sbjct: 703 YYNSGDFEKALEFLEKSIQLNPMNEN---VQFIVGCCYLKLLK--------FENAITPFS 751

Query: 164 RIVERYTNSPYV 175
           R+V    ++   
Sbjct: 752 RVVSINPDNSDA 763


>gi|326913950|ref|XP_003203294.1| PREDICTED: dnaJ homolog subfamily C member 3-like [Meleagris
           gallopavo]
          Length = 499

 Score = 41.6 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 38/297 (12%), Positives = 86/297 (28%), Gaps = 68/297 (22%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
            L      +        +T     + +Y +A+   +++++  A    ++      +   A
Sbjct: 126 VLKSNPSNNEEKEAQTQLTKSDELQRLYSQALSAYQQEDYEAAIPLLDEILAVCVW--DA 183

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY----VYYLVG----------- 138
               L  A      G+  +A S  +       ++    Y    +YY +G           
Sbjct: 184 DLRELR-AECYIKEGEPSKAISDLKAAAKLKSDNTEAFYKISRIYYQLGDHELSLSEVRE 242

Query: 139 -----------MSYAQMIRDVPYDQRATKL---------MLQYMSRIVERYTNSP-YVKG 177
                       S  + ++ +     + +           +     +++   + P Y   
Sbjct: 243 CLKLDQDHKQCFSLYKQVKKLNKQIESAEEFIREGRYEDAISKYDSVMKTEPDVPVYATR 302

Query: 178 ARFYVTVG--RNQLAAKEVEI------------------GRYYLKRGEYVAAIPRFQLVL 217
           A+  +     +NQ A + + +                     YL    Y  AI  ++   
Sbjct: 303 AKERICHCLSKNQQATEAITVCTQVLQLEPTNVNALKDRAEAYLLEDLYEEAIKDYETAQ 362

Query: 218 ANYSDAEHAEEAMAR----LVEA-----YVALALMDEAREVVSLIQERYPQGYWARY 265
           AN  + +   E + R    L ++     Y  L +   AR+   +   R     W   
Sbjct: 363 ANSENDQQIREGLERAQRMLKQSQKRDYYKILGVKRNARKQEIIKAYRKLASQWHPD 419


>gi|312890049|ref|ZP_07749593.1| Tetratricopeptide TPR_2 repeat protein [Mucilaginibacter paludis
           DSM 18603]
 gi|311297581|gb|EFQ74706.1| Tetratricopeptide TPR_2 repeat protein [Mucilaginibacter paludis
           DSM 18603]
          Length = 999

 Score = 41.6 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 28/76 (36%), Gaps = 8/76 (10%)

Query: 95  KSLLMS----AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
           K  L      A   +   KY+ A  + + ++ +  ++K     YYL GM Y         
Sbjct: 731 KYQLDMLWLCANAWFLDKKYENAIEMLDRFLNK-QQNKVNAEAYYLRGMCYYNTHNYKAS 789

Query: 151 DQ---RATKLMLQYMS 163
           +Q    A KL  Q   
Sbjct: 790 NQDLNEAVKLSQQTFR 805


>gi|254474652|ref|ZP_05088038.1| tetratricopeptide TPR_2 [Ruegeria sp. R11]
 gi|214028895|gb|EEB69730.1| tetratricopeptide TPR_2 [Ruegeria sp. R11]
          Length = 285

 Score = 41.6 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 14/115 (12%), Positives = 38/115 (33%), Gaps = 10/115 (8%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY-QQAAS 115
           ++  ++ A   L E ++  A E F   +  +P + +   +           G   + A +
Sbjct: 162 EQRDFDAAKAALDEGSYQAAAEQFVAFTLAYPGSPLTSAAEYHRGKALDGLGDTREAARA 221

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
               + +  P  +      + +G +  ++          T      +S +  R+ 
Sbjct: 222 YLAAF-SANPAGQTAPDALFELGAALGRL--------GQTSQACVTLSEVGGRFP 267


>gi|196000432|ref|XP_002110084.1| hypothetical protein TRIADDRAFT_53679 [Trichoplax adhaerens]
 gi|190588208|gb|EDV28250.1| hypothetical protein TRIADDRAFT_53679 [Trichoplax adhaerens]
          Length = 1330

 Score = 41.6 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 74/231 (32%), Gaps = 60/231 (25%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQ--------CSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
                +L +  + +A   + +           + P   +A  S           GK+++A
Sbjct: 408 NLGNAYLDQGKYEEAISMYEKSLKIRLSVLDHNHP--DIAV-SYNNMGEAYRHQGKHEEA 464

Query: 114 ASLGEEYITQ------YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            S+ E+ +        +    +V   Y  +G +Y          Q   +  +        
Sbjct: 465 ISMYEQSLKIRLSVLGH-NHPDVAMSYNNLGNAY--------RHQSKHEEAI-------- 507

Query: 168 RYTNSPYVKGARFYV-TVGRNQ--LAAKEVEIGRYYLKRGEYVAAIP--------RFQLV 216
               S Y K  +  +  +G N   +A     +G  Y  +G+Y  AI         R  ++
Sbjct: 508 ----SMYEKSLKITLPVLGHNHPDVAGSYSNMGAVYSNQGKYEEAISMNKKSLKIRLSVL 563

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEA--------REVVSLIQERYPQ 259
             N+ D   +      + E Y      +EA        +  +S++   +P 
Sbjct: 564 GHNHPDVAASY---NNMGEVYRHQGKHEEAISMYEKSLKITLSVLGHNHPD 611



 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 78/239 (32%), Gaps = 71/239 (29%)

Query: 60  VYEK-AVLFLKEQNFSKAYEYFNQ--------CSRDFP-----FAGVARKSLLMSAFVQY 105
           +Y     + L +  + +A   + +           + P     +  +        A+   
Sbjct: 657 LYNNMGAVNLDQGKYEEAISMYEKSLKITLSVLGHNHPDVAASYNNMGE------AYRY- 709

Query: 106 SAGKYQQAASLGEEYITQ------YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
             GK+++A S+ E+ +        +    ++   Y  +G +Y          Q   +  +
Sbjct: 710 -QGKHEEAISMYEKSLKITLSVLGH-NHPDIAGSYNNLGNAY--------RHQGKHEEAI 759

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVG-RNQ--LAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                       S Y K  +  ++V   N   +A     +G  Y  +G+Y  AI  ++  
Sbjct: 760 ------------SMYEKSLKITLSVLGHNHPDVAGSYNNLGNAYSNQGKYEEAISMYEKS 807

Query: 217 LA--------NYSDAEHAEEAMARLVEAYVALALMDEA--------REVVSLIQERYPQ 259
           L         N+ D   +      + EAY      +EA        +  +S++   +P 
Sbjct: 808 LKIRLSVLDHNHPDIAASY---NNMGEAYRHQGKREEAISMYEKSLKIRLSVLGHNHPD 863


>gi|113475191|ref|YP_721252.1| glycosyl transferase family protein [Trichodesmium erythraeum
           IMS101]
 gi|110166239|gb|ABG50779.1| glycosyl transferase, family 2 [Trichodesmium erythraeum IMS101]
          Length = 1737

 Score = 41.6 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 16/119 (13%), Positives = 43/119 (36%), Gaps = 14/119 (11%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           +     + +++    +      KA   + +     P   + ++       V    GK+++
Sbjct: 8   NSETPTQYFQQGQQAVAAGQLEKAVTLYKKTIELNPNLALYQQ---NLGDVLAKIGKWEE 64

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           AA++ ++ I   P S           +S+  +  +V   Q   +  +   S+ ++   N
Sbjct: 65  AATVYQKAIELKPTS----------ALSHYNL-GNVQEKQGQLEQAIASYSQAIKINPN 112



 Score = 38.9 bits (90), Expect = 0.65,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 49/144 (34%), Gaps = 29/144 (20%)

Query: 61  YEKAVLFLKEQNFSKAYEYFN---QCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAAS 115
           Y + +  L+   + +A   +    +   + P  +            +V     ++++A S
Sbjct: 222 YGETLAKLR--RWDEAIAAYRQAIKLEANSPVIYHQF--------GYVLTQKQQWEEAIS 271

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
              + I   P S +   VY+ +G        D    Q+  +  +    ++ E   NSP  
Sbjct: 272 AYRQAIKIKPNSPD---VYHHLG--------DALTQQQNWEEAVGAYRKVTELQPNSP-- 318

Query: 176 KGARFYVTVGRNQLAAKEVEIGRY 199
                Y     +QL   E  I  Y
Sbjct: 319 -EVYHYFGYALSQLQQWEEAIVAY 341


>gi|281347136|gb|EFB22720.1| hypothetical protein PANDA_021839 [Ailuropoda melanoleuca]
          Length = 520

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 67/200 (33%), Gaps = 23/200 (11%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLL 98
            Q+S    L   +D      +  K        ++ KA E++      D   +     +L 
Sbjct: 337 TQASSYADLAVNSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALY 392

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
                     +  +A      ++  +   +N   V Y +   Y +++ D           
Sbjct: 393 NIGLTYKRLNRLDEALDC---FLKLHAILRNSAQVLYQIANVY-ELMEDPN-------QA 441

Query: 159 LQYMSRIVERYT-NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA-IPRFQLV 216
           ++++ +++     +S     A   +    +    K  +  +YY +   Y  + I   + +
Sbjct: 442 IEWLMQLISVVPTDSR----ALSKLGELYDSEGDKS-QAFQYYYESYRYFPSNIEVIEWL 496

Query: 217 LANYSDAEHAEEAMARLVEA 236
            A Y D +  E+A+     A
Sbjct: 497 GAYYIDTQFCEKAIQYFERA 516


>gi|124024538|ref|YP_001018845.1| hypothetical protein P9303_28501 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964824|gb|ABM79580.1| Hypothetical protein P9303_28501 [Prochlorococcus marinus str. MIT
           9303]
          Length = 706

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 41/130 (31%), Gaps = 19/130 (14%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
            N+  A   FN+     P    A  + +     +Y    YQ A +   + IT  P+    
Sbjct: 466 GNYQGAIADFNKAIEINP--QYAP-AYMNRGIAKYDLKDYQGAIADYSKAITINPQH--- 519

Query: 131 DYVYYLVGMSYAQMIRDVPYDQ-RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
                   +++    R    DQ    +  +  ++R +E          A       + +L
Sbjct: 520 -------AIAFNN--RSNAKDQLGDHQGAISDLNRAIEINPQ---FADAFNNRGATKYEL 567

Query: 190 AAKEVEIGRY 199
              +  I  Y
Sbjct: 568 GDHQGAIADY 577



 Score = 39.7 bits (92), Expect = 0.40,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 50/170 (29%), Gaps = 27/170 (15%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            +     K +++  A   +N+     P        + L+       + G YQ A +   +
Sbjct: 355 NRGNAKKKLKDYQGAITDYNKAIEINPQHTGPFNNRGLVKK-----NLGDYQGAIADYNK 409

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            I   P+     Y YY  G+    +           +  +   ++ +        +    
Sbjct: 410 AIELDPQH---AYAYYNRGIVKKNL--------GDYQGAIADYNKAIAINPQ---LAETY 455

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRG---EYVAA-IPR--FQLVLANYSDA 223
                 +  L   +  I  +        +Y  A + R   +  L +Y  A
Sbjct: 456 SNRGGIKRVLGNYQGAIADFNKAIEINPQYAPAYMNRGIAKYDLKDYQGA 505


>gi|328707547|ref|XP_003243427.1| PREDICTED: serine/threonine-protein phosphatase 5-like
           [Acyrthosiphon pisum]
          Length = 476

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 51/157 (32%), Gaps = 30/157 (19%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD--------FPFAG-VARKSLLMSAF 102
            D+ +   + E+A +    + ++ A +Y+++              FA   A +S     F
Sbjct: 12  ADITHAERMKEEANVHFSAKRYADAIDYYSKAIAMCESSSTKPHNFAAYYANRS-----F 66

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQ 160
                  Y  A +   + I   P+     Y+  YY    +Y  +           K  L+
Sbjct: 67  AHSKTEAYGYALADASKAIQLDPK-----YLKGYYRRATAYMSL--------GKFKEALK 113

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLA-AKEVEI 196
               +V+   N    K           +LA  K + +
Sbjct: 114 DYEVVVKALPNDKDAKVKYAECNKLVKRLAFEKAISV 150


>gi|291531589|emb|CBK97174.1| ABC-type transport system, involved in lipoprotein release,
           permease component [Eubacterium siraeum 70/3]
          Length = 1144

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/133 (12%), Positives = 39/133 (29%), Gaps = 34/133 (25%)

Query: 61  YEKAVLFLKEQ--NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG--KYQQAASL 116
           YE      ++    ++     +      +     A K+   + + QY++G  KY    + 
Sbjct: 476 YEDGKKQYEDGYSQYTSGLAQYESAKAQY----DAGKAQYDAGYAQYASGKAKYDSGKAE 531

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            ++           +Y  Y  G+      +     + A     +                
Sbjct: 532 YDK-----------NYADYEKGLKEYNEGKTAL--ETAKTDADKQF-------------A 565

Query: 177 GARFYVTVGRNQL 189
            A+  +  GR +L
Sbjct: 566 DAQKKIDDGREKL 578


>gi|281356693|ref|ZP_06243184.1| TPR repeat-containing protein [Victivallis vadensis ATCC BAA-548]
 gi|281316820|gb|EFB00843.1| TPR repeat-containing protein [Victivallis vadensis ATCC BAA-548]
          Length = 837

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 74/203 (36%), Gaps = 26/203 (12%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           +A+L  K  + ++A   + +     P +  + ++L  +A +     +Y  A     E+  
Sbjct: 472 RALLLEKAGHSAEARSEYLKFLVAHPDSEYSPRALFSAAELAMELREYPAAVREFFEFAE 531

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
           + P+S +     Y      A        +   T+  ++ +    ++Y  SP V  +R   
Sbjct: 532 KNPKSDSAPAALYQ-----AMQSGYFARNAAETRRAIELLE---KKYPESPVVIESR--- 580

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA---MARLVEAYVA 239
                      +++  Y ++  +Y  A+ +   V   Y  A+  E A   +         
Sbjct: 581 -----------LQLADYLIRDADYDGALAQLAEV-EKYPAAKSPETASELLYDHARIARL 628

Query: 240 LALMDEAREVVSLIQERYPQGYW 262
               ++A + +  + + +P   +
Sbjct: 629 QRQDEDALKFLEQLLKEHPSNAF 651



 Score = 40.1 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 25/201 (12%), Positives = 62/201 (30%), Gaps = 25/201 (12%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y       +E+NF +A       +     +  A  +            +Y++A  + E  
Sbjct: 399 YLFGEYSFREKNFRQAANLLKTVADS--GSNRADAARYRLLQSLVELKRYKEAEPVAEA- 455

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           + + P   +     +   +   +           +        + +  + +S Y   A  
Sbjct: 456 LRRSPVQTHATSADFYRALLLEKA--------GHSAEARSEYLKFLVAHPDSEYSPRAL- 506

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
                               ++  EY AA+  F         ++ A  A+ + +++    
Sbjct: 507 -------------FSAAELAMELREYPAAVREFFEFAEKNPKSDSAPAALYQAMQSGYFA 553

Query: 241 ALMDEAREVVSLIQERYPQGY 261
               E R  + L++++YP+  
Sbjct: 554 RNAAETRRAIELLEKKYPESP 574



 Score = 37.0 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 18/136 (13%), Positives = 49/136 (36%), Gaps = 6/136 (4%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           +    +         +Y+        +N ++         + +P + V  +S L  A   
Sbjct: 528 EFAEKNPKSDSAPAALYQAMQSGYFARNAAETRRAIELLEKKYPESPVVIESRLQLADYL 587

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
                Y  A +   E + +YP +K+ +    L+          +   QR  +  L+++ +
Sbjct: 588 IRDADYDGALAQLAE-VEKYPAAKSPETASELL-----YDHARIARLQRQDEDALKFLEQ 641

Query: 165 IVERYTNSPYVKGARF 180
           +++ + ++ +   A  
Sbjct: 642 LLKEHPSNAFGAEAAL 657



 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 75/234 (32%), Gaps = 33/234 (14%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           + Y  + +       +Y+ A +   ++    A ++  Q  ++ P      ++ L +  ++
Sbjct: 604 EKYPAAKSPETASELLYDHARIARLQRQDEDALKFLEQLLKEHPSNAFGAEAALSAGNLK 663

Query: 105 YSAGKYQQAASLGEEYITQYPESKN-------VDYVYYLVGMSYAQMIRDVPYDQRAT-- 155
              G Y++A    E  +T  P  +N       +    Y     YA+ +     DQ A   
Sbjct: 664 ADQGNYREALKFYERALTLGPAGRNAELTRGRIADARY---NIYAETLDKNDLDQAAAIY 720

Query: 156 -KLML-----QYMSRIVERYTNS-------PYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
            +L       Q M + + +Y               A   +      L  + +     +  
Sbjct: 721 RELADGSGNPQVMLQSLYKYGKCCELMDEREDALRAYEKLLYLAGDLQRRGIAPDPVWTS 780

Query: 203 RGEYVAAIPRFQLVLANYSDAEH-AEEAMARLVEAYVALALMDEAREVVSLIQE 255
           RG Y A +   +            A  A+   +  Y  L L     +   + QE
Sbjct: 781 RGAYQAVLLNLKD------GTPASARRALED-IRLYEELKLTGAGEDFARIKQE 827


>gi|67922166|ref|ZP_00515681.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
 gi|67856066|gb|EAM51310.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
          Length = 270

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 73/244 (29%), Gaps = 73/244 (29%)

Query: 33  CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
             + G     ++D    +   +   + + +KA+   +  NF++A  Y+ Q    FP    
Sbjct: 16  TSVTGTGLAQTQDNPPLTEEQLEEGQSIAKKAIAATENGNFAQAETYWTQLVETFPSNPA 75

Query: 93  A---------RKSLLMSAFVQYS----------------------AGKYQQAASLGEEYI 121
           A          ++ L +A   ++                       GKY +A +     +
Sbjct: 76  AWSNRGNARVSQNKLEAAIADFNQAIELAPEAADPYLNRGTALEAQGKYDEAIADYNRVL 135

Query: 122 TQYPESKNVDYVYYLVG------------MSYAQMIRDVP--------------YDQRAT 155
              P+       Y   G            ++  +   ++               Y    T
Sbjct: 136 ELNPDD---AMAYNNRGNAKSGEGEWEQALTDYRKASEIAPNFAFARANAALVYYQIGKT 192

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI---PR 212
              ++ M  +V +Y   P V+ A   V     Q    E            +VAA+    R
Sbjct: 193 GEAVKEMRNLVRKYPMFPDVRAALTAVLWNIGQQGEAE----------SHWVAAVGMDNR 242

Query: 213 FQLV 216
           +Q +
Sbjct: 243 YQDL 246


>gi|223939093|ref|ZP_03630977.1| TPR repeat-containing protein [bacterium Ellin514]
 gi|223892253|gb|EEF58730.1| TPR repeat-containing protein [bacterium Ellin514]
          Length = 280

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 5/70 (7%), Positives = 23/70 (32%), Gaps = 3/70 (4%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           +E+A    ++  + +A  ++++  +       +           +   ++  A +   + 
Sbjct: 51  FEQANKCYEQGKYGEAVSHYDKLLQR---GEASEAIYFNLGNAYFKLNQFGHAIASYRQA 107

Query: 121 ITQYPESKNV 130
               P    +
Sbjct: 108 EQLAPRDPEL 117


>gi|114771184|ref|ZP_01448604.1| hypothetical protein OM2255_07505 [alpha proteobacterium HTCC2255]
 gi|114548109|gb|EAU50996.1| hypothetical protein OM2255_07505 [alpha proteobacterium HTCC2255]
          Length = 508

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 45/126 (35%), Gaps = 10/126 (7%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG-EE 119
           Y+ A++ L E NF  A   F+      P   +   +            +++ A     E 
Sbjct: 389 YQTALMPLNENNFELAIIQFDSLINVIPSGPLLTAAHYSKGDAFSELEEWKAAGKSYLES 448

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           +    P+ K        VG+S  +M +               ++R+  R+  +  V+ A+
Sbjct: 449 F-KLEPDGKYAAKALMNVGISLGKMQK--------INEACNILNRVEARFPRNQIVEEAQ 499

Query: 180 FYVTVG 185
           + + + 
Sbjct: 500 YEMQIL 505



 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 82/287 (28%), Gaps = 74/287 (25%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--------- 91
             S      +      ++  Y+ A+  L E N+  A   F++  + FP            
Sbjct: 215 GGSVKTSNTNAELAITEKSNYDNALKLLNENNYELALLEFDKLIKAFPNGPLTVAAHYSK 274

Query: 92  ----------------------------VARKSLLMSAFV---QYSAGKYQQAASLGEEY 120
                                        A+K+L  S            +Q A    ++ 
Sbjct: 275 GDAFIGLTAWDQGVNSYLESFSLEPNGKYAQKALKSSYDASLELLKQNDFQVALIQFDKL 334

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           I    +   +  VYY  G        D     +  K  L+   +  E  ++  Y   A  
Sbjct: 335 IDITSDDTFLAGVYYSRG--------DAFTGMQDWKSALRSYLKSYELESDGNYAAKALK 386

Query: 181 --------------------YVTVGRNQLAAKEVEIGRYYLKRGE------YVAAIPRFQ 214
                                     N + +  +    +Y K         + AA   + 
Sbjct: 387 ASYQTALMPLNENNFELAIIQFDSLINVIPSGPLLTAAHYSKGDAFSELEEWKAAGKSYL 446

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
                  D ++A +A+  +  +   +  ++EA  +++ ++ R+P+  
Sbjct: 447 ESFKLEPDGKYAAKALMNVGISLGKMQKINEACNILNRVEARFPRNQ 493


>gi|90023205|ref|YP_529032.1| hypothetical protein Sde_3565 [Saccharophagus degradans 2-40]
 gi|89952805|gb|ABD82820.1| TPR repeat [Saccharophagus degradans 2-40]
          Length = 222

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 44/160 (27%), Gaps = 39/160 (24%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQR---------------------EVYEKAVLFLKEQN 72
            + G     S+    +       +                      + +  A   +KE+ 
Sbjct: 22  VVAGCTSSPSKKDEAEQAATAEGEETPFVLIPSPYQPKGSAPSQAKKEFAAAQTAMKEKQ 81

Query: 73  FSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           + +A       +  +P           +    V     +Y++A    E  I   P   N+
Sbjct: 82  WQQAENILLLMTETYPELSGPY-----VNLGIVYLQTKRYEEAVKALEFAIETNPT--NM 134

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           D  Y  +G++Y         +Q   +         +E + 
Sbjct: 135 D-AYSQLGLAY--------REQGLFEQADMAYQSALEVWP 165


>gi|84385371|ref|ZP_00988403.1| hypothetical protein V12B01_16911 [Vibrio splendidus 12B01]
 gi|84379968|gb|EAP96819.1| hypothetical protein V12B01_16911 [Vibrio splendidus 12B01]
          Length = 656

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 21/71 (29%), Gaps = 11/71 (15%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           K +   K  +F  A +     S           +    A  Q   GKY QA    +  + 
Sbjct: 373 KGIAQYKAGDFEAAEQTLQDLS--------GEDARYNLANAQAKQGKYDQAIKEYQRILE 424

Query: 123 QYPESKNVDYV 133
             PE     Y 
Sbjct: 425 SNPEH---AYA 432


>gi|311269779|ref|XP_003132635.1| PREDICTED: prolyl 3-hydroxylase 2-like [Sus scrofa]
          Length = 672

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 6/68 (8%)

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           F  Y  G+Y +A    + Y+  +P+ ++V     L  + Y + I D   D  +     + 
Sbjct: 278 FAYYRVGEYVKALECAKAYLLIHPDDEDV-----LDNVDYYESILDDSIDPGSI-EARED 331

Query: 162 MSRIVERY 169
           +   V+R+
Sbjct: 332 LMMFVKRH 339


>gi|261404029|ref|YP_003240270.1| tetratricopeptide repeat-containing protein [Paenibacillus sp.
           Y412MC10]
 gi|261280492|gb|ACX62463.1| Tetratricopeptide TPR_2 repeat protein [Paenibacillus sp. Y412MC10]
          Length = 581

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 72/203 (35%), Gaps = 29/203 (14%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           +++AV  L    + KA +YF +     P   V        A +    G Y+ +  +    
Sbjct: 28  FDRAVRSLDRYQYDKALKYFRKAVEYEPDNPVNH---CNMAGILSETGDYKASNDVLAHI 84

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           + Q      +   Y+ +  +YA M           +   + +   +E   N  ++  A  
Sbjct: 85  LEQ--VDPLMTECYFYMANNYANM--------EQFEKAEEALVTYLEEDPNGQFLDEAEE 134

Query: 181 YVTVGR---------NQLAAKEVEI----GRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            + +           N++ ++E  +     R  L+ G++  A+   + ++ +  D     
Sbjct: 135 MMELLHYELNRPAKLNRIKSREGVVEHEHARALLEEGKFAQAVKLLEEIVKDNPDFLA-- 192

Query: 228 EAMARLVEAYVALALMDEAREVV 250
            A   L  AY  +   D A+  +
Sbjct: 193 -ARNNLALAYYYMGRFDTAKRTI 214


>gi|170727074|ref|YP_001761100.1| tol-pal system protein YbgF [Shewanella woodyi ATCC 51908]
 gi|169812421|gb|ACA87005.1| tol-pal system protein YbgF [Shewanella woodyi ATCC 51908]
          Length = 243

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 50/130 (38%), Gaps = 17/130 (13%)

Query: 61  YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL--- 116
           YE+A+   LK++ + +A   F+  ++++P +  +  +      + Y+ G++  A      
Sbjct: 126 YEQALNLVLKQKRYDEAIPAFSAFTKNYPNSTYSANANYWLGQLLYNKGEFTSAKEAFST 185

Query: 117 -GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
             + +        +         +    MI +      + K    Y  R+++ Y NS   
Sbjct: 186 VVDRFKESNKRGDS---------LVKLGMIAEKTGVPSSAK---SYYQRVLKEYANSAAA 233

Query: 176 KGARFYVTVG 185
           + A+  +   
Sbjct: 234 RIAQQQLNAL 243



 Score = 37.8 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 36/124 (29%), Gaps = 22/124 (17%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
              +Y +A      +   YP S       Y +G                     +  S +
Sbjct: 135 KQKRYDEAIPAFSAFTKNYPNSTYSANANYWLGQLLYNK--------GEFTSAKEAFSTV 186

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           V+R+  S     +   + +                 K G   +A   +Q VL  Y+++  
Sbjct: 187 VDRFKESNKRGDSLVKLGMIAE--------------KTGVPSSAKSYYQRVLKEYANSAA 232

Query: 226 AEEA 229
           A  A
Sbjct: 233 ARIA 236


>gi|149923636|ref|ZP_01912033.1| hypothetical protein PPSIR1_22456 [Plesiocystis pacifica SIR-1]
 gi|149815503|gb|EDM75039.1| hypothetical protein PPSIR1_22456 [Plesiocystis pacifica SIR-1]
          Length = 449

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 37/111 (33%), Gaps = 14/111 (12%)

Query: 62  EKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
                 +K++++ +           D     V  K L    F  Y  G    A S  +  
Sbjct: 87  NAGRRAVKKKDYDEGIVLLRGALEAD----PVNPKVLGELGFAAYKKGDLALAESSTKRA 142

Query: 121 ITQY-PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           I Q  P  +++  +YY +G+       +   D+ A        +R +E   
Sbjct: 143 IDQAPPGHESLGALYYNLGLI------EEARDEPA--KAKAAFARSLEARP 185


>gi|329942390|ref|ZP_08291200.1| tetratricopeptide repeat family protein [Chlamydophila psittaci
           Cal10]
 gi|332287031|ref|YP_004421932.1| putative tetratricopeptide repeat protein [Chlamydophila psittaci
           6BC]
 gi|313847628|emb|CBY16616.1| putative lipoprotein [Chlamydophila psittaci RD1]
 gi|325507126|gb|ADZ18764.1| putative tetratricopeptide repeat protein [Chlamydophila psittaci
           6BC]
 gi|328815300|gb|EGF85288.1| tetratricopeptide repeat family protein [Chlamydophila psittaci
           Cal10]
 gi|328914263|gb|AEB55096.1| TPR domain protein [Chlamydophila psittaci 6BC]
          Length = 318

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 53/152 (34%)

Query: 75  KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
            A   +++    FP   +  ++L +   +  +     +A    ++   Q+         +
Sbjct: 152 DALRIYDEILTAFPNKDLGAQALYLKGDLLVTKKDLPEAIKTFKKLTLQFSAHPLSPKSF 211

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
             +   Y    +  P++ +   L       I +++ N P        V     + A+   
Sbjct: 212 VRLSEIYLMQAQKEPHNLQYLNLAKINEEAIGKQHPNHPLNSVVAANVRAMCERYASGLY 271

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
             GR+Y K+ +  AA   +   + NY ++   
Sbjct: 272 STGRFYEKKKKPHAASIYYATAIENYPESSLV 303


>gi|260900752|ref|ZP_05909147.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus AQ4037]
 gi|308110196|gb|EFO47736.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus AQ4037]
          Length = 251

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 47/130 (36%), Gaps = 15/130 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            Q   D+   +R     +    +  + Y +S Y               A     +G+ Y 
Sbjct: 137 YQNAVDLILKKRDYTGAIAAFQQFQKDYPDSTYS--------------ANSHYWLGQLYF 182

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + +   A+  F  V+ +Y D+    +A+ +L E         +A++    + + YP   
Sbjct: 183 AKKQDKDAVKSFAAVV-SYKDSNKRADALLKLGEIAERNNNAAQAKKYYQQVVDEYPGSA 241

Query: 262 WARYVETLVK 271
            A+   + +K
Sbjct: 242 SAKLAGSKLK 251



 Score = 40.9 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 41/124 (33%), Gaps = 23/124 (18%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               Y  A +  +++   YP+S      +Y +G  Y    +D        K  ++  + +
Sbjct: 146 KKRDYTGAIAAFQQFQKDYPDSTYSANSHYWLGQLYFAKKQD--------KDAVKSFAAV 197

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           V  Y +S     A   +       A +     +          A   +Q V+  Y  +  
Sbjct: 198 VS-YKDSNKRADALLKLGEI----AERNNNAAQ----------AKKYYQQVVDEYPGSAS 242

Query: 226 AEEA 229
           A+ A
Sbjct: 243 AKLA 246



 Score = 35.1 bits (80), Expect = 9.8,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 52/148 (35%), Gaps = 16/148 (10%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
           +++         T    ++  Y+ AV   LK+++++ A   F Q  +D+P +  +  S  
Sbjct: 116 KETKPTETSGKYTPNVDEQTAYQNAVDLILKKRDYTGAIAAFQQFQKDYPDSTYSANSHY 175

Query: 99  MSAFVQY---SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
               + +         ++ +    Y      +K  D        +  ++      +  A 
Sbjct: 176 WLGQLYFAKKQDKDAVKSFAAVVSYKD---SNKRAD--------ALLKLGEIAERNNNAA 224

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVT 183
               +Y  ++V+ Y  S   K A   + 
Sbjct: 225 -QAKKYYQQVVDEYPGSASAKLAGSKLK 251


>gi|188990359|ref|YP_001902369.1| hypothetical protein xccb100_0963 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167732119|emb|CAP50311.1| putative membrane protein [Xanthomonas campestris pv. campestris]
          Length = 603

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/117 (12%), Positives = 36/117 (30%), Gaps = 9/117 (7%)

Query: 11  IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLD-SVTDVRYQREVYEKAVLFLK 69
           +F   A  L  F       +     VG   + ++           + Q++  +  V   +
Sbjct: 311 LFPVMALALLAFRRRAAVMVLALLCVGPFVEPAQAAEGTLWQRADQVQQQRLDAGVQAYR 370

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
           + +F+ A + F              +            G+Y  A +  +  + + P+
Sbjct: 371 KGDFAAAQKAFEAVP--------TDQGWYNLGNALARQGRYDDAIAAYDRALRRQPQ 419


>gi|126451956|ref|YP_001066323.1| TPR repeat-containing protein [Burkholderia pseudomallei 1106a]
 gi|134277247|ref|ZP_01763962.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 305]
 gi|126225598|gb|ABN89138.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1106a]
 gi|134250897|gb|EBA50976.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 305]
          Length = 1454

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 50/192 (26%), Gaps = 40/192 (20%)

Query: 63   KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
            +A L L   +F +A   F +     P    A +S         +  +   A +  +  + 
Sbjct: 909  RAELALDTGDFDEALSQFERLREQRP---DAPESYANLIPALAALERRDDAIAALQRALE 965

Query: 123  QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
               +            ++                          ++Y             
Sbjct: 966  LNSKHPG--------ALNNGVQ-----------------FYLRTQQY---DKAMELAQRY 997

Query: 183  TVGRNQLAAKEVEIGRYYLKRGEY---VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                 +LA+     G  Y     Y    A++ R   +        H  EA+  L      
Sbjct: 998  VGAHGELASAHTMCGLVYHNLKAYDRAEASLRRALEIE------PHNAEALFALGTVLER 1051

Query: 240  LALMDEAREVVS 251
            +  + E+ EV+ 
Sbjct: 1052 VDRLAESEEVLR 1063


>gi|23296072|gb|AAN12289.1| hypothetical protein [Aquifex pyrophilus]
          Length = 233

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 45/136 (33%), Gaps = 27/136 (19%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y   +  +A      +I +YP++   D  Y+ +G  Y ++           +  LQ +  
Sbjct: 118 YKMKRLNEARDAFVNFIKKYPKTNLTDNAYFWLGTIYYEL--------GNEERALQILKT 169

Query: 165 IV-----ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
           ++      R  +   +    + +     +    E E  RY          + R +     
Sbjct: 170 LIGKCKEGRLPDCNKLPDTYYMLVKIYAE-EGNESEAERY----------LNRLK---EE 215

Query: 220 YSDAEHAEEAMARLVE 235
           + D    E+A   L +
Sbjct: 216 FPDTPLIEKAEKVLYK 231



 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/119 (12%), Positives = 35/119 (29%), Gaps = 19/119 (15%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                    +++Y  +     A F++                 Y + G    A+   + +
Sbjct: 125 EARDAFVNFIKKYPKTNLTDNAYFWLGTI--------------YYELGNEERALQILKTL 170

Query: 217 LAN-----YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
           +         D     +    LV+ Y       EA   ++ ++E +P        E ++
Sbjct: 171 IGKCKEGRLPDCNKLPDTYYMLVKIYAEEGNESEAERYLNRLKEEFPDTPLIEKAEKVL 229


>gi|307178712|gb|EFN67326.1| RNA polymerase-associated protein CTR9-like protein [Camponotus
           floridanus]
          Length = 1264

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 51/141 (36%), Gaps = 24/141 (17%)

Query: 133 VYYLVGM------SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------R 179
            Y L+ +      +  Q  +D   ++R     L    +++     + +           +
Sbjct: 600 AYSLIALGNIWLQTLHQSGKDKEREKRHQDRALAMYKQVLRNDPKNIWAANGIGAVLAHK 659

Query: 180 FYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
             V   R+  A  +E         + I   Y+++ ++V+AI  ++  L  +    H  E 
Sbjct: 660 GCVNEARDIFAQVREATAEFCDVWLNIAHIYVEQKQFVSAIQMYENCLRKFYRYHHV-EV 718

Query: 230 MARLVEAYVALALMDEAREVV 250
           +  L  AY     + EA+  +
Sbjct: 719 LQYLGRAYFKAGKLKEAKLTL 739


>gi|197122252|ref|YP_002134203.1| hypothetical protein AnaeK_1846 [Anaeromyxobacter sp. K]
 gi|196172101|gb|ACG73074.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp. K]
          Length = 695

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 43/136 (31%), Gaps = 29/136 (21%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            +    L+  NF+ A E + +     P +  A +     A      G    A +  + ++
Sbjct: 32  ARGRANLRIGNFAAAVEAYRKALAGNPGSREASRG---VALALLQNGDTDLAVAELDRHL 88

Query: 122 TQYPESKNVD-----------YVY-------YLV-GMS-------YAQMIRDVPYDQRAT 155
            ++P+   +            Y Y       YL  G++         ++ R +  D+   
Sbjct: 89  ARFPDDAELAFRQAGLLQWSRYAYRSKDAVRYLRMGLAVRDDPARRRELARLLARDRGTL 148

Query: 156 KLMLQYMSRIVERYTN 171
              L    R++     
Sbjct: 149 GEALAEYDRLLAAAPE 164


>gi|167763112|ref|ZP_02435239.1| hypothetical protein BACSTE_01481 [Bacteroides stercoris ATCC
           43183]
 gi|167699452|gb|EDS16031.1| hypothetical protein BACSTE_01481 [Bacteroides stercoris ATCC
           43183]
          Length = 278

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 7/69 (10%), Positives = 19/69 (27%), Gaps = 4/69 (5%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            +        +++ A + +    +       A           Y A    +A    E  +
Sbjct: 54  AQGDSAYMRNDYASAIQIYESLLKK---GEAAE-VYYNLGNSYYKADDIAKAILNYERAL 109

Query: 122 TQYPESKNV 130
              P + ++
Sbjct: 110 LLQPGNADI 118


>gi|328473191|gb|EGF44039.1| hypothetical protein VP10329_20975 [Vibrio parahaemolyticus 10329]
          Length = 251

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 47/130 (36%), Gaps = 15/130 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            Q   D+   +R     +    +  + Y +S Y               A     +G+ Y 
Sbjct: 137 YQNAVDLILKKRDYTGAIAAFQQFQKDYPDSTYS--------------ANSHYWLGQLYF 182

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + +   A+  F  V+ +Y D+    +A+ +L E         +A++    + + YP   
Sbjct: 183 AKKQDKDAVKSFAAVV-SYKDSNKRADALLKLGEIAERNNNAAQAKKYYQQVVDEYPGSA 241

Query: 262 WARYVETLVK 271
            A+   + +K
Sbjct: 242 SAKLAGSKLK 251



 Score = 40.9 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 41/124 (33%), Gaps = 23/124 (18%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               Y  A +  +++   YP+S      +Y +G  Y    +D        K  ++  + +
Sbjct: 146 KKRDYTGAIAAFQQFQKDYPDSTYSANSHYWLGQLYFAKKQD--------KDAVKSFAAV 197

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           V  Y +S     A   +       A +     +          A   +Q V+  Y  +  
Sbjct: 198 VS-YKDSNKRADALLKLGEI----AERNNNAAQ----------AKKYYQQVVDEYPGSAS 242

Query: 226 AEEA 229
           A+ A
Sbjct: 243 AKLA 246



 Score = 35.1 bits (80), Expect = 9.8,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 52/148 (35%), Gaps = 16/148 (10%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
           +++         T    ++  Y+ AV   LK+++++ A   F Q  +D+P +  +  S  
Sbjct: 116 KETKPTETSGKYTPNVDEQTAYQNAVDLILKKRDYTGAIAAFQQFQKDYPDSTYSANSHY 175

Query: 99  MSAFVQY---SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
               + +         ++ +    Y      +K  D        +  ++      +  A 
Sbjct: 176 WLGQLYFAKKQDKDAVKSFAAVVSYKD---SNKRAD--------ALLKLGEIAERNNNAA 224

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVT 183
               +Y  ++V+ Y  S   K A   + 
Sbjct: 225 -QAKKYYQQVVDEYPGSASAKLAGSKLK 251


>gi|283851178|ref|ZP_06368461.1| Peptidoglycan-binding LysM [Desulfovibrio sp. FW1012B]
 gi|283573347|gb|EFC21324.1| Peptidoglycan-binding LysM [Desulfovibrio sp. FW1012B]
          Length = 447

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 49/136 (36%), Gaps = 24/136 (17%)

Query: 39  ERQSSRDVYLDSVTDVRYQREV------YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
             +++R    ++   +   RE+      +EK +   K+  F KA E F++  +  P    
Sbjct: 276 PSKTARASEPEAPPAMPESREMADAESSFEKGIELGKQNKFQKAVESFDKAIKLNP---- 331

Query: 93  ARKSLL--MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
             ++          Y   +Y +A     + I + P   N    Y + G+SY +  R    
Sbjct: 332 -NRADYFASRGHANYYMKQYPKAIDDYTKAIEKNP---NFALAYSMRGLSYTRSGRYP-- 385

Query: 151 DQRATKLMLQYMSRIV 166
                   +   ++ +
Sbjct: 386 ------QAIDDFNKAI 395


>gi|296123749|ref|YP_003631527.1| hypothetical protein Plim_3515 [Planctomyces limnophilus DSM 3776]
 gi|296016089|gb|ADG69328.1| Tetratricopeptide TPR_4 [Planctomyces limnophilus DSM 3776]
          Length = 1009

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 73/211 (34%), Gaps = 44/211 (20%)

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY---AQMIR 146
                 + + S           +A+S   E++ +YP   +     Y +  S    A++IR
Sbjct: 799 GTYIPDAGIDSIRAV-----QIEASSRLTEFLARYPNDPSEVQAMYQLARSQREQARLIR 853

Query: 147 DVPYDQ--RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN----------------- 187
           +        A KL L    +I++        + +   +   R+                 
Sbjct: 854 NALKSPLAEAVKLRLAEQQKILD--------EQSLDNLVKLRDTLNKQANQTGLNTLHEA 905

Query: 188 QLAAKEVEIGR--YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
            LA    ++G   + L+R +   AI  +   +  Y +      A  ++ EAY  +    E
Sbjct: 906 ILANTAFDVGHQLFELRRDK--DAIMAYNTAINRYRNNPQVLSAFLQMAEAYRRMGKPAE 963

Query: 246 AR---EVVSLI--QERYPQGYWARYVETLVK 271
           AR   E   +I  Q++ P   +     +L +
Sbjct: 964 ARSMLEQGRVILRQKQIPDSAFDNLGSSLTR 994


>gi|167918851|ref|ZP_02505942.1| hypothetical protein BpseBC_09870 [Burkholderia pseudomallei BCC215]
          Length = 1451

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 50/192 (26%), Gaps = 40/192 (20%)

Query: 63   KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
            +A L L   +F +A   F +     P    A +S         +  +   A +  +  + 
Sbjct: 906  RAELALDTGDFDEALSQFERLREQRP---DAPESYANLIPALAALERRDDAIAALQRALE 962

Query: 123  QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
               +            ++                          ++Y             
Sbjct: 963  LNSKHPG--------ALNNGVQ-----------------FYLRTQQY---DKAMELAQRY 994

Query: 183  TVGRNQLAAKEVEIGRYYLKRGEY---VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                 +LA+     G  Y     Y    A++ R   +        H  EA+  L      
Sbjct: 995  VGAHGELASAHTMCGLVYHNLKAYDRAEASLRRALEIE------PHNAEALFALGTVLER 1048

Query: 240  LALMDEAREVVS 251
            +  + E+ EV+ 
Sbjct: 1049 VDRLAESEEVLR 1060


>gi|167815662|ref|ZP_02447342.1| hypothetical protein Bpse9_10994 [Burkholderia pseudomallei 91]
 gi|226197223|ref|ZP_03792800.1| tetratricopeptide repeat protein [Burkholderia pseudomallei Pakistan
            9]
 gi|225930602|gb|EEH26612.1| tetratricopeptide repeat protein [Burkholderia pseudomallei Pakistan
            9]
          Length = 1451

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 50/192 (26%), Gaps = 40/192 (20%)

Query: 63   KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
            +A L L   +F +A   F +     P    A +S         +  +   A +  +  + 
Sbjct: 906  RAELALDTGDFDEALSQFERLREQRP---DAPESYANLIPALAALERRDDAIAALQRALE 962

Query: 123  QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
               +            ++                          ++Y             
Sbjct: 963  LNSKHPG--------ALNNGVQ-----------------FYLRTQQY---DKAMELAQRY 994

Query: 183  TVGRNQLAAKEVEIGRYYLKRGEY---VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                 +LA+     G  Y     Y    A++ R   +        H  EA+  L      
Sbjct: 995  VGAHGELASAHTMCGLVYHNLKAYDRAEASLRRALEIE------PHNAEALFALGTVLER 1048

Query: 240  LALMDEAREVVS 251
            +  + E+ EV+ 
Sbjct: 1049 VDRLAESEEVLR 1060


>gi|159468488|ref|XP_001692406.1| flagellar associated protein [Chlamydomonas reinhardtii]
 gi|158278119|gb|EDP03884.1| flagellar associated protein [Chlamydomonas reinhardtii]
          Length = 647

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 44/86 (51%), Gaps = 9/86 (10%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
            + + +Y + +Y      +KEQ F++A ++     ++ P +   R +L +  +  Y  G+
Sbjct: 10  PIAEGQYTQTIY----TLIKEQKFAEAIQHLQYQLQNVPES---RAALSLLGYCYYYTGQ 62

Query: 110 YQQAASLGEEYITQYPESKNVDYVYY 135
           Y  A+ + E+ +T YP ++  DY  Y
Sbjct: 63  YDMASQMYEQLVTLYPSNE--DYKLY 86



 Score = 35.5 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 29/73 (39%), Gaps = 5/73 (6%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           +K  ++  AI   Q  L N  ++     A++ L   Y      D A ++   +   YP  
Sbjct: 24  IKEQKFAEAIQHLQYQLQNVPESRA---ALSLLGYCYYYTGQYDMASQMYEQLVTLYPSN 80

Query: 261 YWAR--YVETLVK 271
              +  Y ++L K
Sbjct: 81  EDYKLYYAQSLYK 93


>gi|148654221|ref|YP_001274426.1| protein-glutamate O-methyltransferase [Roseiflexus sp. RS-1]
 gi|148566331|gb|ABQ88476.1| Protein-glutamate O-methyltransferase [Roseiflexus sp. RS-1]
          Length = 490

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 57/172 (33%), Gaps = 23/172 (13%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
              T      +  ++A   L       A E         P + +A ++L + A V  + G
Sbjct: 320 PKPTSSNADADHLDRAQALLDAGRLDDAMEVLRTIP---PNSSLAPRALTLVARVHANRG 376

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +   A +     +         D  Y L+G  Y +        Q      +Q + R    
Sbjct: 377 ELDLAIAEVRRALEI---DALRDDAYLLLGTMYVR--------QGQWHDAIQSLERARYL 425

Query: 169 YTNSPYVKG--ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
             ++  V    A  Y   G+ +LAA+E       L++     A  R + +L 
Sbjct: 426 NPDAALVSYHLAMAYRQAGKKELAAREFRSA---LRK----LAAYRAEDLLE 470


>gi|317502927|ref|ZP_07961022.1| viral beta C/D like family protein [Prevotella salivae DSM 15606]
 gi|315665961|gb|EFV05533.1| viral beta C/D like family protein [Prevotella salivae DSM 15606]
          Length = 348

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 18/139 (12%), Positives = 44/139 (31%), Gaps = 22/139 (15%)

Query: 61  YEKAVLFLKEQNFSKAYEYFN-QCSRDF--PFAGVARKSLLMSAFVQYS-----AGKYQQ 112
           Y  A    ++  +  A +  +    + +   F   A ++ + S              +  
Sbjct: 84  YHDAQSSKEQSEYEYAMKSTDPAVLQAYLDTFTD-APEAHIDSIQAHLLMLQQGDKDWSN 142

Query: 113 AA-----SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           A      S  E YI  +P+S +     +         I  + +   +T   +   +  ++
Sbjct: 143 ALVSNSKSAFEAYIANHPDSPHKAEAEH--------KIDSIDWATVSTTNTVDAYNTYLQ 194

Query: 168 RYTNSPYVKGARFYVTVGR 186
            + N  +V  A+  +    
Sbjct: 195 DHPNGEHVDEAKDGIKQVN 213


>gi|296192058|ref|XP_002743902.1| PREDICTED: tetratricopeptide repeat protein 38-like isoform 1
           [Callithrix jacchus]
          Length = 468

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 46/147 (31%), Gaps = 29/147 (19%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQ----------REVYEKAVLFLKEQNFSKAYEYFN 81
              L+G       D  LD       +           +++  AV    + NF KA E + 
Sbjct: 73  GLVLIGTGSSVKLDKELDLAVKTMVEISRTQPLTRREQLHVSAVETFAKGNFPKACELWE 132

Query: 82  QCSRDFPFAGVARKSLLMSA-----FVQYSAGKYQQAASLGEEYITQYPE-SKNVDYVYY 135
           Q  +D P          M A        +  G  +Q           YP  + ++    Y
Sbjct: 133 QILQDHPTD--------MLALKFSHDAYFYLGYQEQMRDSVAR---IYPFWTPDIPLSSY 181

Query: 136 LVGMSYAQMIRDVPYDQ--RATKLMLQ 160
           + G+    ++    YDQ  +  +  L 
Sbjct: 182 VKGIYSFGLMETNFYDQAKKLAREALS 208


>gi|254412704|ref|ZP_05026477.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC
           7420]
 gi|196180439|gb|EDX75430.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC
           7420]
          Length = 501

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 81/263 (30%), Gaps = 55/263 (20%)

Query: 11  IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE---------VY 61
             E  +  + +  L    ++ V  LVG        +   +V+ +  Q +         + 
Sbjct: 10  ETELLSVTMTRTRLFSQLTLTVITLVGLTVTLPPRINPLAVSPIFAQTQNTSKAEADRLL 69

Query: 62  EKAVLFLKEQNFSKAYEY-------FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
            + +   + + F +A E        F +            KSL       YS  +Y++A 
Sbjct: 70  IQGLQQFQRRQFREAIESWQKSLSIFQEIGDR----QGVAKSLTNLGIAYYSLSQYEKAI 125

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
                               Y   +S  Q I     DQ      L  +   +  Y+ S Y
Sbjct: 126 E------------------LYQQSLSIFQEIG----DQLGVADSLNNLG--IAYYSLSQY 161

Query: 175 VKGARFY------VTVGRNQL--AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS---DA 223
            K    Y           +QL  A      G  Y    +Y  AI  FQ  L  +    D 
Sbjct: 162 EKAIELYQQSLSIFQEIGDQLGVADSLNNFGNVYYSLSQYKKAIELFQQALPIFQEIGDR 221

Query: 224 EHAEEAMARLVEAYVALALMDEA 246
               +++  L  AY  L+  ++A
Sbjct: 222 RGVADSLNNLGNAYNNLSQYEKA 244


>gi|193214013|ref|YP_001995212.1| TPR repeat-containing protein [Chloroherpeton thalassium ATCC
           35110]
 gi|193087490|gb|ACF12765.1| TPR repeat-containing protein [Chloroherpeton thalassium ATCC
           35110]
          Length = 740

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA-GKYQ 111
           +   ++ +Y  A+  L+      +          +P + +  K LL   F+  +   +  
Sbjct: 578 ENAPEQILYTNAIQTLENSQADTSLAMLKTLLSRYPNSALIPKVLLGIGFIYENNLSEPD 637

Query: 112 QAASLGEEYITQYPESKNV 130
            A    ++    YP+S+  
Sbjct: 638 SAILAYQKLAADYPKSEEA 656



 Score = 37.8 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 44/132 (33%), Gaps = 15/132 (11%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQC----SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
              +   ++     A + F       +    F  +  +  L +A+ Q    +  +A  L 
Sbjct: 260 NTGIALREQSRARLAIKIFQDLLADDNNLENFGEI--RFELATAYAQ--NDELGKAFDLY 315

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           +E I ++P ++     +Y +G    ++ +D+                    Y      K 
Sbjct: 316 QEIIYRHPGTEAAAKSFYQLGKLRMEISQDLTM-------AKTLFDSAKAAYPKGDIAKK 368

Query: 178 ARFYVTVGRNQL 189
           A+   T  +N L
Sbjct: 369 AQEQSTTLKNLL 380


>gi|189054119|dbj|BAG36639.1| unnamed protein product [Homo sapiens]
          Length = 459

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/146 (13%), Positives = 46/146 (31%), Gaps = 30/146 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARKSL-------LMSAFVQYSAGK 109
           E+  ++ KE  + +A   + +      +        A+K+        L  A        
Sbjct: 275 ERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQA 334

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           +  A     + +     ++      +  G ++  +           +L      ++++ Y
Sbjct: 335 FSAAIESCNKALELDSNNEKG---LFRRGEAHLTVND--------FELARADFQKVLQLY 383

Query: 170 TNSPYVKGARFYVTVG----RNQLAA 191
            N+     A+  + V     R QLA 
Sbjct: 384 PNNK---AAKTQLAVCQQRIRRQLAR 406


>gi|167761625|ref|ZP_02433752.1| hypothetical protein CLOSCI_04037 [Clostridium scindens ATCC 35704]
 gi|167660768|gb|EDS04898.1| hypothetical protein CLOSCI_04037 [Clostridium scindens ATCC 35704]
          Length = 174

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 31/223 (13%), Positives = 68/223 (30%), Gaps = 58/223 (26%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +    + +    A   L G  +  S                  EK V +L++  + +A E
Sbjct: 1   MKYMKIALSVMAAAIVLTGCVKNPS------------------EKGVEYLEDGKYKEAIE 42

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQ-------YSAGKYQQAASLGEEYITQYPESKNVD 131
            F            A  S + +           +    Y+ A    +  +     +K   
Sbjct: 43  QFQD----------AIDSEVNAGDAYRGIGIAKWEQEDYEGAKEAFQNALDN--GAKKTG 90

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
            +Y  +G    ++ R         +  L Y    + +  +S      +  +         
Sbjct: 91  TIYNFMGNCDMKLSR--------PESALNYFRLGIGQEDSSE---ELKKEMHF------- 132

Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
             + +   Y +  ++ +A  + +  LA Y D E A++ +  L 
Sbjct: 133 -NMIVA--YEQMKDWESAKAKLKEYLAEYPDDEAAKKELEFLE 172


>gi|67923943|ref|ZP_00517398.1| TPR repeat [Crocosphaera watsonii WH 8501]
 gi|67854211|gb|EAM49515.1| TPR repeat [Crocosphaera watsonii WH 8501]
          Length = 656

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 61/184 (33%), Gaps = 30/184 (16%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK-----SLLMSAFVQYSAGKYQQAASLG 117
           +A+++L+ +N+  A    ++       +    +     + L    +   A  YQ A    
Sbjct: 353 RAIVYLEMKNYEAALTDLSKIIELGKNSQETEEFVVVFAYLQRGKLYQQAKNYQGAIEDF 412

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP--YV 175
              I   P S     VY   G+SYAQ+        +     ++  S +++    +   Y 
Sbjct: 413 SSLIKLQPNSPESVEVYGRRGLSYAQL--------KNYPAAIEDFSSLIKSQPKNHQGYT 464

Query: 176 KGARFYVTVGRNQLAAKE----VEIG----RYYLKR-------GEYVAAIPRFQLVLANY 220
              R Y+ +     A K+    V I       Y  R         Y AAI     ++   
Sbjct: 465 YRCRVYIELKDYNQAMKDCNQAVAIAPNNPEVYFARAGVHSGLKNYSAAIKDADKIIEIA 524

Query: 221 SDAE 224
            D  
Sbjct: 525 PDFP 528



 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 74/216 (34%), Gaps = 46/216 (21%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF-----VQYSAGKYQQAASL 116
            +AV++ + +++  A + F++         +A +   +  +     V      Y+ A + 
Sbjct: 318 SRAVIYQQVKDYEAAIKDFSK--------AIAIQPEFIRIYGRRAIVYLEMKNYEAALTD 369

Query: 117 GEEYITQYPESKNVD-----YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
             + I     S+  +     + Y   G  Y Q         +  +  ++  S +++   N
Sbjct: 370 LSKIIELGKNSQETEEFVVVFAYLQRGKLYQQA--------KNYQGAIEDFSSLIKLQPN 421

Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
           SP           GR  L+         Y +   Y AAI  F  ++ +        +   
Sbjct: 422 SPESVE-----VYGRRGLS---------YAQLKNYPAAIEDFSSLIKSQPK---NHQGYT 464

Query: 232 RLVEAYVALALMDEARE---VVSLIQERYPQGYWAR 264
                Y+ L   ++A +       I    P+ Y+AR
Sbjct: 465 YRCRVYIELKDYNQAMKDCNQAVAIAPNNPEVYFAR 500


>gi|237812363|ref|YP_002896814.1| tetratricopeptide repeat family protein [Burkholderia pseudomallei
            MSHR346]
 gi|237506629|gb|ACQ98947.1| tetratricopeptide repeat family protein [Burkholderia pseudomallei
            MSHR346]
          Length = 1451

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 50/192 (26%), Gaps = 40/192 (20%)

Query: 63   KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
            +A L L   +F +A   F +     P    A +S         +  +   A +  +  + 
Sbjct: 906  RAELALDTGDFDEALSQFERLREQRP---DAPESYANLIPALAALERRDDAIAALQRALE 962

Query: 123  QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
               +            ++                          ++Y             
Sbjct: 963  LNSKHPG--------ALNNGVQ-----------------FYLRTQQY---DKAMELAQRY 994

Query: 183  TVGRNQLAAKEVEIGRYYLKRGEY---VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                 +LA+     G  Y     Y    A++ R   +        H  EA+  L      
Sbjct: 995  VGAHGELASAHTMCGLVYHNLKAYDRAEASLRRALEIE------PHNAEALFALGTVLER 1048

Query: 240  LALMDEAREVVS 251
            +  + E+ EV+ 
Sbjct: 1049 VDRLAESEEVLR 1060


>gi|254179720|ref|ZP_04886319.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1655]
 gi|184210260|gb|EDU07303.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1655]
          Length = 1454

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 50/192 (26%), Gaps = 40/192 (20%)

Query: 63   KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
            +A L L   +F +A   F +     P    A +S         +  +   A +  +  + 
Sbjct: 909  RAELALDTGDFDEALSQFERLREQRP---DAPESYANLIPALAALERRDDAIAALQRALE 965

Query: 123  QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
               +            ++                          ++Y             
Sbjct: 966  LNSKHPG--------ALNNGVQ-----------------FYLRTQQY---DKAMELAQRY 997

Query: 183  TVGRNQLAAKEVEIGRYYLKRGEY---VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                 +LA+     G  Y     Y    A++ R   +        H  EA+  L      
Sbjct: 998  VGAHGELASAHTMCGLVYHNLKAYDRAEASLRRALEIE------PHNAEALFALGTVLER 1051

Query: 240  LALMDEAREVVS 251
            +  + E+ EV+ 
Sbjct: 1052 VDRLAESEEVLR 1063


>gi|167845602|ref|ZP_02471110.1| tetratricopeptide repeat family protein [Burkholderia pseudomallei
            B7210]
 gi|254197877|ref|ZP_04904299.1| tetratricopeptide repeat protein [Burkholderia pseudomallei S13]
 gi|169654618|gb|EDS87311.1| tetratricopeptide repeat protein [Burkholderia pseudomallei S13]
          Length = 1451

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 50/192 (26%), Gaps = 40/192 (20%)

Query: 63   KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
            +A L L   +F +A   F +     P    A +S         +  +   A +  +  + 
Sbjct: 906  RAELALDTGDFDEALSQFERLREQRP---DAPESYANLIPALAALERRDDAIAALQRALE 962

Query: 123  QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
               +            ++                          ++Y             
Sbjct: 963  LNSKHPG--------ALNNGVQ-----------------FYLRTQQY---DKAMELAQRY 994

Query: 183  TVGRNQLAAKEVEIGRYYLKRGEY---VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                 +LA+     G  Y     Y    A++ R   +        H  EA+  L      
Sbjct: 995  VGAHGELASAHTMCGLVYHNLKAYDRAEASLRRALEIE------PHNAEALFALGTVLER 1048

Query: 240  LALMDEAREVVS 251
            +  + E+ EV+ 
Sbjct: 1049 VDRLAESEEVLR 1060


>gi|167910819|ref|ZP_02497910.1| hypothetical protein Bpse112_10010 [Burkholderia pseudomallei 112]
 gi|254188884|ref|ZP_04895395.1| tetratricopeptide repeat protein [Burkholderia pseudomallei Pasteur
            52237]
 gi|157936563|gb|EDO92233.1| tetratricopeptide repeat protein [Burkholderia pseudomallei Pasteur
            52237]
          Length = 1451

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 50/192 (26%), Gaps = 40/192 (20%)

Query: 63   KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
            +A L L   +F +A   F +     P    A +S         +  +   A +  +  + 
Sbjct: 906  RAELALDTGDFDEALSQFERLREQRP---DAPESYANLIPALAALERRDDAIAALQRALE 962

Query: 123  QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
               +            ++                          ++Y             
Sbjct: 963  LNSKHPG--------ALNNGVQ-----------------FYLRTQQY---DKAMELAQRY 994

Query: 183  TVGRNQLAAKEVEIGRYYLKRGEY---VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                 +LA+     G  Y     Y    A++ R   +        H  EA+  L      
Sbjct: 995  VGAHGELASAHTMCGLVYHNLKAYDRAEASLRRALEIE------PHNAEALFALGTVLER 1048

Query: 240  LALMDEAREVVS 251
            +  + E+ EV+ 
Sbjct: 1049 VDRLAESEEVLR 1060


>gi|189423652|ref|YP_001950829.1| peptidoglycan-binding LysM [Geobacter lovleyi SZ]
 gi|189419911|gb|ACD94309.1| Peptidoglycan-binding LysM [Geobacter lovleyi SZ]
          Length = 193

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 8/50 (16%), Positives = 21/50 (42%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
           ++  Y  A+   K+ +   A + F++    +P + +  ++ L  A     
Sbjct: 140 EKNAYNHAMENFKKGDCEAAIKQFDRFISRYPSSSLLPEATLNRAECYLK 189


>gi|76809563|ref|YP_333589.1| TPR repeat-containing protein [Burkholderia pseudomallei 1710b]
 gi|167738470|ref|ZP_02411244.1| tetratricopeptide repeat family protein [Burkholderia pseudomallei
            14]
 gi|217421376|ref|ZP_03452880.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 576]
 gi|242316339|ref|ZP_04815355.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1106b]
 gi|254258508|ref|ZP_04949562.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1710a]
 gi|254297570|ref|ZP_04965023.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 406e]
 gi|76579016|gb|ABA48491.1| Tetratricopeptide repeat family [Burkholderia pseudomallei 1710b]
 gi|157807326|gb|EDO84496.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 406e]
 gi|217395118|gb|EEC35136.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 576]
 gi|242139578|gb|EES25980.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1106b]
 gi|254217197|gb|EET06581.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1710a]
          Length = 1451

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 50/192 (26%), Gaps = 40/192 (20%)

Query: 63   KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
            +A L L   +F +A   F +     P    A +S         +  +   A +  +  + 
Sbjct: 906  RAELALDTGDFDEALSQFERLREQRP---DAPESYANLIPALAALERRDDAIAALQRALE 962

Query: 123  QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
               +            ++                          ++Y             
Sbjct: 963  LNSKHPG--------ALNNGVQ-----------------FYLRTQQY---DKAMELAQRY 994

Query: 183  TVGRNQLAAKEVEIGRYYLKRGEY---VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                 +LA+     G  Y     Y    A++ R   +        H  EA+  L      
Sbjct: 995  VGAHGELASAHTMCGLVYHNLKAYDRAEASLRRALEIE------PHNAEALFALGTVLER 1048

Query: 240  LALMDEAREVVS 251
            +  + E+ EV+ 
Sbjct: 1049 VDRLAESEEVLR 1060


>gi|113475906|ref|YP_721967.1| hypothetical protein Tery_2266 [Trichodesmium erythraeum IMS101]
 gi|110166954|gb|ABG51494.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101]
          Length = 1213

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 71/223 (31%), Gaps = 50/223 (22%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFP-----FAGVARKSLLMSAFVQYSAGKYQQAASL 116
           +K    +    F +A   F Q    +P     +   A  +         S G ++ A   
Sbjct: 397 QKGNALINLSRFDEAEAVFQQLKEKYPNRPHGYERYAALTQ--------SLGDWELALKR 448

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
             E + ++P  +N+D+       +   + R                 +++E+Y N     
Sbjct: 449 WSEAVFKFP--ENIDF-QVQKANALINLSR--------FDEAEAVFQQLIEKYPN---QP 494

Query: 177 GARFYVTVGRNQLAAKEV-------EIGR------YYLKRGEYVAAIPRFQL-------V 216
                       L   E+        I +      +YL++G+ +A + R++        V
Sbjct: 495 DGYERCAALTQSLGDWELALERWENAIAKFPGHFNFYLQKGDVLANLFRYEEAEIWWEKV 554

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           +A Y       E + +       L   + A +      E++P 
Sbjct: 555 IALYP---ARHEGLYKSAALARLLGNREFAWQRFEQAIEKFPG 594



 Score = 39.7 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 66/205 (32%), Gaps = 48/205 (23%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFP-----FAGVARKSLLMSAFVQYSAGKYQQAASL 116
           +K    +    F +A   F Q    +P     +   A  +         S G ++ A   
Sbjct: 329 QKGNALINLSRFDEAEAVFQQLKEKYPNRPHGYERYAALTQ--------SLGDWELALKR 380

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
             E + ++P  +N+D+     G +   + R                 ++ E+Y N P+  
Sbjct: 381 WSEAVFKFP--ENIDF-QVQKGNALINLSR--------FDEAEAVFQQLKEKYPNRPHG- 428

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE--HAEEAMARLV 234
                       L   E+              A+ R+   +  + +      ++A     
Sbjct: 429 --YERYAALTQSLGDWEL--------------ALKRWSEAVFKFPENIDFQVQKA----- 467

Query: 235 EAYVALALMDEAREVVSLIQERYPQ 259
            A + L+  DEA  V   + E+YP 
Sbjct: 468 NALINLSRFDEAEAVFQQLIEKYPN 492



 Score = 35.9 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 66/212 (31%), Gaps = 46/212 (21%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFP-----FAGVARKSLLMSAFVQYSAGKYQQAASL 116
           +K    +    F +A   F      +P     +   AR          +  G  + A  L
Sbjct: 261 QKGNTLINLARFDEAKAVFQHLKEKYPNQPQGYENYARLI--------HRLGDGELALKL 312

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
             E I ++P+   V  V    G +   + R                 ++ E+Y N P+  
Sbjct: 313 WSEAIIKFPK-PIVFQVQ--KGNALINLSR--------FDEAEAVFQQLKEKYPNRPHG- 360

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                       L   E+              A+ R+   +  + +    +    +   A
Sbjct: 361 --YERYAALTQSLGDWEL--------------ALKRWSEAVFKFPENIDFQ---VQKGNA 401

Query: 237 YVALALMDEAREVVSLIQERYPQGY--WARYV 266
            + L+  DEA  V   ++E+YP     + RY 
Sbjct: 402 LINLSRFDEAEAVFQQLKEKYPNRPHGYERYA 433


>gi|166362748|ref|YP_001655021.1| TPR repeat-containing protein [Microcystis aeruginosa NIES-843]
 gi|166085121|dbj|BAF99828.1| tetratricopeptide repeat protein [Microcystis aeruginosa NIES-843]
          Length = 266

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 30/232 (12%), Positives = 68/232 (29%), Gaps = 59/232 (25%)

Query: 30  IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
           +++         +  D    S   +R    + EKA+   ++ ++++A  Y+ Q    FP 
Sbjct: 9   LSLLLFFALPIAAYADSPTISEEQIREGEVIAEKALEATEKGDYAQAESYWTQLVAKFPT 68

Query: 90  AG--VARKS-------LLMSAFVQYSA----------------------GKYQQAASLGE 118
                + +         L  A   ++                       GKYQ+A +   
Sbjct: 69  NPAVWSNRGNARVSLNKLEDAIADFNQAIAIAPDAPDPYLNRGTALEGEGKYQEAIADYN 128

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           + +   P      + Y   G +   +           +  ++   +  +   N  + +  
Sbjct: 129 KVLELDPND---AFAYNNRGNAEGGL--------GDWEAAVKDYRQATQLAPNFAWAQ-- 175

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
                     LA  E+         G Y  A+ + + +   Y        A+
Sbjct: 176 ------ANLALALYEL---------GRYPEAVQKMRNIARKYPMFPDVRAAL 212


>gi|154493385|ref|ZP_02032705.1| hypothetical protein PARMER_02722 [Parabacteroides merdae ATCC
           43184]
 gi|154086595|gb|EDN85640.1| hypothetical protein PARMER_02722 [Parabacteroides merdae ATCC
           43184]
          Length = 1052

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 38/239 (15%), Positives = 83/239 (34%), Gaps = 54/239 (22%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMS 100
           ++R   L +  D      +Y +   ++ ++ + KA +Y      ++  F      +L   
Sbjct: 448 TNRPKELPADFDWNSAYGLYIQGEQWMNQKVYDKAEKYLTASLEKEAYFLP----ALTSL 503

Query: 101 AFVQYSAGKYQQAA---------SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
           A + Y  G+Y+ A          +  + Y              YL G+    +  +    
Sbjct: 504 ASLYYRQGRYEDALFNCHIALSVNAYDGYSN------------YLYGLCNMALGNETD-- 549

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
               K      S  +  + ++ Y K A  ++     + A        Y LK  ++     
Sbjct: 550 ---AKDGFSVASYSIS-FRSAAYEKLAEMFLIACDWKKAEH------YALKSKDFN---- 595

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
                       +   +A   L+ AY  +  M++A+ V+  + +  P  + AR+ + L+
Sbjct: 596 ------------QQNLKADQVLMIAYRKMGQMNKAKAVIDSLLDDLPLYHLARFEDLLL 642


>gi|167855102|ref|ZP_02477874.1| hypothetical protein HPS_06724 [Haemophilus parasuis 29755]
 gi|167853737|gb|EDS24979.1| hypothetical protein HPS_06724 [Haemophilus parasuis 29755]
          Length = 397

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 74/197 (37%), Gaps = 32/197 (16%)

Query: 48  LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           +++     +++++  K   A  F+    + +A  Y+     +      A  SL   A + 
Sbjct: 103 IENSPHYSFEQKLLAKQQLAKDFMAAGFYDRAENYYITLLDE---PEFAVNSLSQLAVIY 159

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           +   ++++A ++ E+ +   PE   +   +Y               D++A    LQ    
Sbjct: 160 HKTREWKRAINVAEKRLRIEPEMDKIPLSHYY---CEYAQAVRSD-DEKAFLTALQ---- 211

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
                        A  YV       A   + +G ++ ++ E   A+  F+ VL    +  
Sbjct: 212 ------------KALSYVPHC----ARASILLGDFFFEKQEMRTALRYFEAVLEQEPN-- 253

Query: 225 HAEEAMARLVEAYVALA 241
           +  E + ++ + Y+AL 
Sbjct: 254 YISEVLHKIKQCYIALN 270


>gi|83311940|ref|YP_422204.1| O-linked N-acetylglucosamine transferase [Magnetospirillum
           magneticum AMB-1]
 gi|82946781|dbj|BAE51645.1| Predicted O-linked N-acetylglucosamine transferase
           [Magnetospirillum magneticum AMB-1]
          Length = 728

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 66/205 (32%), Gaps = 36/205 (17%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++ + +  L++  + +A   F   +        A +          S GK  +AA     
Sbjct: 8   LFRQGIGALQQGKWDEAARQFRTLTGR---TPNAPEPFYYLGVALLSGGKPDEAAETLTR 64

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN-------- 171
            I ++ ++        L  +  AQ           T    +   R++    +        
Sbjct: 65  LIRKHGDNPMA-----LNALGSAQAASG------KTGPAEKSFKRVLALAPDLSDAAENL 113

Query: 172 ------SPYVKG--ARFYVTVGRN--QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
                 S       A     + R   +LA++ + +GR     GE   A+  FQ VL    
Sbjct: 114 ARLLIESQRAAEALAPLRSVLSREPGRLASRHL-LGRALRDTGELEGAMAEFQAVLKAQP 172

Query: 222 DAEHAEEAMARLVEAYVALALMDEA 246
           D   A  A+  L   Y A    ++A
Sbjct: 173 D--FAP-ALNDLGLLYFAGGKGEDA 194


>gi|312130007|ref|YP_003997347.1| histidine kinase [Leadbetterella byssophila DSM 17132]
 gi|311906553|gb|ADQ16994.1| histidine kinase [Leadbetterella byssophila DSM 17132]
          Length = 604

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 85/241 (35%), Gaps = 49/241 (20%)

Query: 49  DSVTDVRYQREVYEKAVLFL-KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----- 102
            +  D+   R +Y+   + L    ++ KA    +Q  +    + +A    +M  F     
Sbjct: 15  PAHPDLSKARAIYDSTEVALANRGDYKKAEALLDQAQK----SSLATDVKMMLTFGLRGQ 70

Query: 103 -----VQYSAGKYQ--QAASLGEE-----YI----------TQYPESKNVDYVYYLVGMS 140
                  Y    +   +A    E+     +I           +     N    YY     
Sbjct: 71  IEGYRSNYFNSDFYLFEALKYAEKLNAEYFISEISHALAINKRQEGDLNAAAAYY----- 125

Query: 141 YAQMIRDVPYDQRATKLMLQYMS-RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
             + I +   DQ++ +L L Y +  +V  +  S       F  +   ++ A      G +
Sbjct: 126 -DKAIENAEKDQKSPRLALMYNNYGLVYLHKASLDSAEMMFRKSYDLSKDAGYRSGEGYF 184

Query: 200 Y-------LKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR--LVEAYVALALMDEAREVV 250
           +       LK+ +Y  A+  F+  +  +S      +A+ +  + E Y AL  M +A + +
Sbjct: 185 FSNMGSIRLKQKKYQEALSFFEKGMEVFSGVNG-PQALLKKEMAECYFALGQMKDAEQKI 243

Query: 251 S 251
           S
Sbjct: 244 S 244


>gi|325107986|ref|YP_004269054.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces
           brasiliensis DSM 5305]
 gi|324968254|gb|ADY59032.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces
           brasiliensis DSM 5305]
          Length = 361

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 81/221 (36%), Gaps = 25/221 (11%)

Query: 62  EKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
             A L +++ ++  A +      +     P     R + L      Y   +Y  A    +
Sbjct: 88  NLAELSIQQDDYPAAVDELKRYVELQSSDPQG-YLRLAQL-----YYLQNRYDAAEEWLD 141

Query: 119 EYITQYPESKNV---------DYVYYLVGMS-YAQMIRDVPYDQRATKLMLQYMSRIVER 168
           E I + P + +              +   +S Y   ++ +P+   AT  + + +    E 
Sbjct: 142 EVIRRTPNNFDAVMLSARLARKQADHQKAISEYYHALQVMPHHAEATLELSELLIARHEP 201

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y  S  ++       +  +Q A   + +G  Y +   +  A+ + + V  N +D+E A +
Sbjct: 202 YRASSLLRDLSRRALMEEDQ-ARTHLNLGIAYGQIDRWDDAVEQLE-VARNLNDSELARD 259

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
              RL  A+        +++ + L+ E    G W    + L
Sbjct: 260 R-YRLAYAHWKSG---GSQQALKLLIEMADSGQWNERSDAL 296


>gi|300870997|ref|YP_003785868.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000]
 gi|300688696|gb|ADK31367.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000]
          Length = 790

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 64/193 (33%), Gaps = 30/193 (15%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
           +S +D  +    +        EK+ + L    +  A E  N+             +    
Sbjct: 88  ESLKDFDISIKLNPNIDNTYLEKSNVLLDINKYEDAIENLNKAITLNQNNSY---AYFNR 144

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
              + + G+Y+ A       I     ++ + YV   +G++ + +           +  ++
Sbjct: 145 GIAKSNLGRYEDAIDDYNRAIELNSNNEEI-YVD--IGIAKSNL--------GKYEESIE 193

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY-------------YLKRGEYV 207
           Y ++ ++   N+     A     + +  L   E  I  +             Y  RG   
Sbjct: 194 YYNKAIKLNPNN---SDAYLNRGISKGYLGKYESSINDFNKSIELTPNDENSYFNRGISK 250

Query: 208 AAIPRFQLVLANY 220
           A + R++  + +Y
Sbjct: 251 AYLRRYEESINDY 263



 Score = 40.1 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 53/190 (27%), Gaps = 41/190 (21%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            + + +       +  A + +N+            +  +     + + GKY+++     +
Sbjct: 141 YFNRGIAKSNLGRYEDAIDDYNRAIEL---NSNNEEIYVDIGIAKSNLGKYEESIEYYNK 197

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP--YVKG 177
            I   P + +    Y   G+S   +           +  +   ++ +E   N    Y   
Sbjct: 198 AIKLNPNNSD---AYLNRGISKGYL--------GKYESSINDFNKSIELTPNDENSYFNR 246

Query: 178 ARFYVTVGRNQLAAKEVEIGRY-------------YLKRGE-------YVAAIPRFQLVL 217
                   R      E  I  Y             YL RG        Y  AI  F  V+
Sbjct: 247 GISK-AYLR----RYEESINDYNKVIELNSNNSDAYLNRGASKFNLEIYEEAIKDFNKVI 301

Query: 218 ANYSDAEHAE 227
               +A    
Sbjct: 302 ELNPNANDVY 311


>gi|332968277|gb|EGK07351.1| Sel1 repeat superfamily protein [Kingella kingae ATCC 23330]
          Length = 290

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 27/69 (39%), Gaps = 7/69 (10%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF---VQYSAGKY 110
               +E+Y K V+ L + N  +A +YF +   + P A       L   +          Y
Sbjct: 16  SPETKEIYNKGVVALSKGNVKQAIDYFERVEYEHPSAAYN----LGLIYLDGADVLVPDY 71

Query: 111 QQAASLGEE 119
           ++A    ++
Sbjct: 72  EKARQYFQQ 80


>gi|225376603|ref|ZP_03753824.1| hypothetical protein ROSEINA2194_02245 [Roseburia inulinivorans DSM
           16841]
 gi|225211486|gb|EEG93840.1| hypothetical protein ROSEINA2194_02245 [Roseburia inulinivorans DSM
           16841]
          Length = 397

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 69/252 (27%), Gaps = 42/252 (16%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQ 82
           +T    ++   + G               + +  +  Y +  +  ++  +++ A + FN 
Sbjct: 45  ITALTLLSFTLMTGCTN------------ERKENQTAYRQIGINAMESGDYAGAVDAFNS 92

Query: 83  CSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                    +     L   +     QY+ G    A       I      K     YYL G
Sbjct: 93  ALGQC-IGKITEN-ELDICYYKAAAQYAGGDPAGAVDTYTAIID---YDKKAADAYYLRG 147

Query: 139 MSYAQMIRD----VPYDQRATKLMLQYMSRIVERYTN-SPY--VKGARFYVTVGRNQLAA 191
             Y +          +D  A K         V  Y N S Y   +    Y+    +    
Sbjct: 148 CVYLKQGNTEGAVSDFD-EAVKNNSSDYELYVNIYENLSAYDMTEKGEEYLNKAFDIKGN 206

Query: 192 K-EVEI--GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
             E     GR Y   G+Y  A    +  L      E     +    + Y A    + A  
Sbjct: 207 SAEDYAWRGRIYYDLGQYDNAQTELKSALDK----ESVIANLYI-AQVYEAQGDPENAET 261

Query: 249 VVSLIQERYPQG 260
                 + Y   
Sbjct: 262 YY----QNYVNS 269


>gi|224537035|ref|ZP_03677574.1| hypothetical protein BACCELL_01911 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224521343|gb|EEF90448.1| hypothetical protein BACCELL_01911 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 739

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 9/69 (13%), Positives = 21/69 (30%), Gaps = 7/69 (10%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL--LMSAFVQYSAGKYQQAASLGEEYI 121
           A  +  + N+++A E                 +L      +  Y   +  +A    E  +
Sbjct: 449 ARSYNNQGNYNEAIEQLLSVKE-----ECKEDALWFYRLGYAYYYLNQLDKAQKAFERSL 503

Query: 122 TQYPESKNV 130
              P  ++ 
Sbjct: 504 ELDPSDEDA 512


>gi|255692989|ref|ZP_05416664.1| putative TPR domain protein [Bacteroides finegoldii DSM 17565]
 gi|260621301|gb|EEX44172.1| putative TPR domain protein [Bacteroides finegoldii DSM 17565]
          Length = 585

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 65/199 (32%), Gaps = 38/199 (19%)

Query: 61  YEKAVLFL--KEQNFSKAYEYFNQCSRDFPFAGVARK-SLLMSAFVQYSAGKYQQAASLG 117
           Y + ++ L  ++    KA          FP    A++  L     +     KY    S  
Sbjct: 117 YSQGLVSLYQQQNELDKAVTLLETMVTRFP----AKQDPLFNLLDIYSHQEKYNDVISTL 172

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
                +  +++ +    + +   Y QM  D        K   + +  +V+ Y        
Sbjct: 173 NRLEKRLGKNEQLSMEKFRI---YLQMKDD--------KKAFREIESLVQEYP------- 214

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
               + +        +V +G  YL+ G+   A   +Q VLA   D      A+  +   Y
Sbjct: 215 ----MDM------RYQVILGDVYLQNGKKQEAYEAYQKVLAVEPD---NPMALFSMASYY 261

Query: 238 VALALMDEAREVVSLIQER 256
             +   +  ++ +  +   
Sbjct: 262 DQIGQKELYQQQLDTLLLN 280


>gi|85858278|ref|YP_460480.1| TPR repeat-containing protein [Syntrophus aciditrophicus SB]
 gi|85721369|gb|ABC76312.1| TPR repeat-containing protein [Syntrophus aciditrophicus SB]
          Length = 649

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 62/188 (32%), Gaps = 39/188 (20%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A   +  + ++ A +   +  +  P +  A         V     KY+ A +L EE I Q
Sbjct: 428 AEAHMLNKEYNLASDTLEKALKANPRS--APLLSAPLVQVYMKQKKYESALALLEERIQQ 485

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN------------ 171
            P      +   L G  Y     ++     + +  +    +++++               
Sbjct: 486 NPGD---AFALNLRGQVYNAQGDEL-KAAESYRQAMAVYEKVLQKQPENWVAANDLAFLL 541

Query: 172 SPYVKG--------ARFYVTVGRNQLAAKEV---EIGRYYLKRGEY-------VAAIPRF 213
           S Y           A      GRN  A        +G  Y K+G+Y       V AI + 
Sbjct: 542 SEYGSKPGDLDRALALARKAYGRN--AENPAVLDTLGWIYYKKGDYRQAEALIVKAINKA 599

Query: 214 -QLVLANY 220
            + V+ NY
Sbjct: 600 PESVMLNY 607


>gi|291239488|ref|XP_002739657.1| PREDICTED: OSMotic avoidance abnormal family member (osm-5)-like
           [Saccoglossus kowalevskii]
          Length = 826

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 37/293 (12%), Positives = 84/293 (28%), Gaps = 53/293 (18%)

Query: 2   SAVLGRAICIFEAWAYQLYKFALTIFFSIAVC-FLVGWERQSSRDVYLDSVTDVRYQREV 60
                +AI   + +  +  K A     +++   FL    + + +   +    D      +
Sbjct: 423 QKDTTQAIETLKGFEKKDSKCASAASTNLSFLYFLQNDYQLADKYAEMAIQADRYNPYAM 482

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
             K      + ++ KA EY+ +  R    +     +L             + A      +
Sbjct: 483 VNKGNCLFAQGDYEKAREYYQEAGRTD--SSCTE-ALYNLGLTNKKINLLEDALDC---F 536

Query: 121 ITQYPESKNVDYVYYLVGMS-------------YAQMIRDVPYDQ-------------RA 154
           +  +   +N   V Y +                Y Q+I  V  D                
Sbjct: 537 LKLHAILRNSPQVLYHLATLYEMLEDSAQASEWYMQLIGVVTTDPGILARLGEIYDNEGD 596

Query: 155 TKLMLQYMSRIVERYT--------------NSPYVKGAR---FYVTVGRNQLAAKEVEIG 197
                QY       +               +S + + A        V +   +  ++ I 
Sbjct: 597 KSQAFQYHYESYRYFPSNIEIIEWLGAYYIDSQFCEKAIHYFERAAVIQPTQSKWQLMIA 656

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
             + + G Y  A+  ++ +   + +     E +  LV     + L  +A++  
Sbjct: 657 SCHRRSGNYQQALETYKHIHKKFPE---NIECLKFLVRLCTDMGLTKDAQDYA 706


>gi|255944463|ref|XP_002562999.1| Pc20g04550 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211587734|emb|CAP85784.1| Pc20g04550 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 748

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 41/134 (30%), Gaps = 26/134 (19%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           EK     ++ ++  A + +++     P   V   + L  A     +  +  A    E+ +
Sbjct: 206 EKGSEHFEKGDYHSAIQCYSKALETHPSPEVLVIAQLNRALSLLKSYSFDAALGDVEDVL 265

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                S+  +   +    +  Q+ R     Q            + E+Y +          
Sbjct: 266 QV---SEMSEKALFRKAQALYQLRRLNESCQTH--------EILAEKYPD---------- 304

Query: 182 VTVGRNQLAAKEVE 195
                N LAA E  
Sbjct: 305 -----NTLAAHEYA 313


>gi|260494916|ref|ZP_05815045.1| tetratricopeptide repeat family protein [Fusobacterium sp. 3_1_33]
 gi|260197359|gb|EEW94877.1| tetratricopeptide repeat family protein [Fusobacterium sp. 3_1_33]
          Length = 936

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 67/204 (32%), Gaps = 29/204 (14%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y K +  +    + +A   F +       + ++ K  L      + A +Y +A   GE+Y
Sbjct: 508 YLKGIAAMGLGKYDEAEADFQKVLASGDQS-LSTKVYLNRVRNYFLAERYNEAVQAGEQY 566

Query: 121 I-TQYPESKNVDYVYYL--VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           +    P+ +   Y   L  +G+SY ++ +   YDQ                   S Y K 
Sbjct: 567 LSKITPDKEKAIYSEMLDKIGLSYFRLGK---YDQAR-----------------SYYSKI 606

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           A         +      +I   Y     Y  A   ++ V  NY +  + E+A  + +   
Sbjct: 607 ASMKGYEVYGK-----FQIADSYYNEKNYEKAASLYKEVYNNYGETFYGEQAYYKYIMTL 661

Query: 238 VALALMDEAREVVSLIQERYPQGY 261
                 D          + YP   
Sbjct: 662 SLTGNTDAFEREKDNFMKVYPNSN 685


>gi|254000197|ref|YP_003052260.1| hypothetical protein Msip34_2496 [Methylovorus sp. SIP3-4]
 gi|253986876|gb|ACT51733.1| Tetratricopeptide TPR_2 repeat protein [Methylovorus sp. SIP3-4]
          Length = 380

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 62/161 (38%), Gaps = 19/161 (11%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
            G ++Q++         D R    ++   V+ L++ N  KA +YF +  +     G   +
Sbjct: 24  AGDDKQATAICQQILAADARQPEAIHLLGVIALQDGNMEKAAQYFQKAIKL---NGKNPQ 80

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY-LVGMSYAQMIRDVPYDQRA 154
                  V +  GK  +A +   + I   P    VD  +Y L  +    +IR   Y    
Sbjct: 81  YHSNLGLVSHEQGKLTEAEASYRKAIQLEPR--YVD-AWYNLHAL----LIRTGDYLP-- 131

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
            +  L  + ++      +P+ + AR  + +  +    KE+ 
Sbjct: 132 AREALDMVLKL------NPHDQEARLMMVILLDYAGEKELS 166


>gi|225376839|ref|ZP_03754060.1| hypothetical protein ROSEINA2194_02481 [Roseburia inulinivorans DSM
           16841]
 gi|225211335|gb|EEG93689.1| hypothetical protein ROSEINA2194_02481 [Roseburia inulinivorans DSM
           16841]
          Length = 460

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 8/82 (9%), Positives = 25/82 (30%), Gaps = 7/82 (8%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGK 109
           +  Y   +Y++       + +  A    ++      ++        +L   A        
Sbjct: 368 NAEYMAALYKEGYDAYSGKKYDDAVSALSKVVEMDENYENGN----ALYYLAQAYRKNED 423

Query: 110 YQQAASLGEEYITQYPESKNVD 131
            + A    ++ +  YP ++   
Sbjct: 424 MENAKIYYQKVVELYPNTERAA 445


>gi|327273355|ref|XP_003221446.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP4-like [Anolis
           carolinensis]
          Length = 433

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 2/84 (2%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKA 76
           +     L    ++A+C L   E     +    ++  D   ++ ++ +    L   +F  A
Sbjct: 291 KAKSLRLAAHLNLAMCHLKLKEYSHVLENCNKALELDNSNEKGLFRRGEAHLAVNDFELA 350

Query: 77  YEYFNQCSRDFPFAGVARKSLLMS 100
            E F +  + +P +  A K+ LM 
Sbjct: 351 REDFQKVLQLYP-SNKAAKAQLMI 373


>gi|326430017|gb|EGD75587.1| mbre TPR repeat protein [Salpingoeca sp. ATCC 50818]
          Length = 826

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 76/245 (31%), Gaps = 61/245 (24%)

Query: 50  SVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQ--------CSRDFP--------FA-G 91
              D R    +Y+   + + K   + KA E+F +             P        F   
Sbjct: 309 EGEDGRNVAGLYDSLGIAYTKTGEYDKAIEHFEKALAIKVEVLGEKHPSTAHTYGNFGLP 368

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
             +K     A   +      +A +LGE          +   VY  +G +Y          
Sbjct: 369 YLQKGENDQAIKYFERSLAIKAETLGER-------HPDTALVYNNIGGAYENKAEYGKAI 421

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           ++  K +   +  + E++ ++                 A     +G  Y K+G++  AI 
Sbjct: 422 EQFQKALAVKVETLGEKHPST-----------------AQTYGNLGNAYYKQGKHDMAIE 464

Query: 212 RFQLVL--------ANYSDAEHAEEAMARLVEAYVALALMDEARE--------VVSLIQE 255
             +  L         N+ +     ++   +  AYV  +   +A +            + E
Sbjct: 465 HAEKALQVFVETLGENHPNTAQTYKS---MGRAYVGKSDYIKAMQCYKKALAITARTLGE 521

Query: 256 RYPQG 260
           ++P  
Sbjct: 522 KHPDT 526



 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 65/221 (29%), Gaps = 65/221 (29%)

Query: 64  AVLFLKEQNFSKAYEYFNQ--------CSRDFP---------FAGVARKSLL-------- 98
            + +L++    +A +YF +             P               K+          
Sbjct: 366 GLPYLQKGENDQAIKYFERSLAIKAETLGERHPDTALVYNNIGGAYENKAEYGKAIEQFQ 425

Query: 99  ----------------------MSAFVQYSAGKYQQAASLGEEYITQY-----PESKNVD 131
                                       Y  GK+  A    E+ +  +         N  
Sbjct: 426 KALAVKVETLGEKHPSTAQTYGNLGNAYYKQGKHDMAIEHAEKALQVFVETLGENHPNTA 485

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
             Y  +G +Y      +   Q   K +      + E++ ++     A  Y+ VG  Q  +
Sbjct: 486 QTYKSMGRAYVGKSDYIKAMQCYKKALAITARTLGEKHPDT-----ATAYLKVGILQFQS 540

Query: 192 KEVEIGRYYLKRGE--YVAAIPRFQLVLANYSDAEHAEEAM 230
            +VE  R Y++R    Y+A +        ++ +   A +++
Sbjct: 541 GDVEQARTYIQRAHSIYMATLG------PDHPNTRRAAQSL 575


>gi|282900369|ref|ZP_06308319.1| Lytic transglycosylase, catalytic [Cylindrospermopsis raciborskii
           CS-505]
 gi|281194682|gb|EFA69629.1| Lytic transglycosylase, catalytic [Cylindrospermopsis raciborskii
           CS-505]
          Length = 724

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 2/82 (2%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           +R  Y  A  +++      A E      +D+P   +A   LL  A  Q   G+   A+ L
Sbjct: 88  ERARYVLASDYIQTNQGKPALELLVGLEKDYP--ALAPYILLKQAQAQDMLGEKGLASDL 145

Query: 117 GEEYITQYPESKNVDYVYYLVG 138
            +  +  YP+S       YL+G
Sbjct: 146 RQRVLRDYPQSPAAVKAMYLIG 167



 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 73/216 (33%), Gaps = 28/216 (12%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           +  + +Y  A     ++   +A   + Q  + FP       +LL  A         + A 
Sbjct: 259 KTAKNLYRTARGLQIDKKREEATVIYKQQVKLFPKEKETGIALLRLA----EMSSGKDAI 314

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
              ++ I Q+P                 +++  +  +Q       Q    ++ +Y++S  
Sbjct: 315 PYLDQIIAQFPS--QAPQALAQKA----KLLTSLKDNQS----ANQTWKLLLSKYSSS-- 362

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
              A       +N LA           K  +Y+ A    Q +     ++  A  A   + 
Sbjct: 363 --DAATEYRW-QNALAK---------AKNRDYIGAWEWAQPIPTQNPESILAPRASFWVG 410

Query: 235 EAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
           +    L   +EAR+    +   +PQ Y+A     ++
Sbjct: 411 KWASLLGKNEEARKSYEYVLANFPQSYYAWRSARIL 446


>gi|257052086|ref|YP_003129919.1| TPR repeat-containing protein [Halorhabdus utahensis DSM 12940]
 gi|256690849|gb|ACV11186.1| TPR repeat-containing protein [Halorhabdus utahensis DSM 12940]
          Length = 251

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 34/105 (32%), Gaps = 13/105 (12%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
            A   L+E  +  A   + +     P +  A  +    A+  + +G+ +QA    E  + 
Sbjct: 106 AAHAELEE--YDAAMGAYREAIEIDPDSEHAATAETNLAYALWESGRSEQALEHAERAVE 163

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
             P        +Y  G  +  + R +       +  +      + 
Sbjct: 164 IDPRFPQ---AWYNRG--FFLLERGL------AEEAIDAFDNAIR 197


>gi|219870698|ref|YP_002475073.1| tetratricopeptide repeat protein [Haemophilus parasuis SH0165]
 gi|219690902|gb|ACL32125.1| lipopolysaccharide N-acetylglucosaminyltransferase [Haemophilus
           parasuis SH0165]
          Length = 397

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 65/178 (36%), Gaps = 29/178 (16%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A  F+    + +A  Y+     +      A  SL   A + +   ++++A ++ E+ +  
Sbjct: 122 AKDFMAAGFYDRAENYYITLLDE---PEFAVNSLSQLAVIYHKTREWKKAINVAEKRLRI 178

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
            PE   +   +Y               D++A    LQ                 A  YV 
Sbjct: 179 EPEMDKIPLSHYY---CEYAQAVRSD-DEKAFLTALQ----------------KALSYVP 218

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
                 A   + +G ++ ++ E   A+  F+ VL    +  +  E + ++ + Y+AL 
Sbjct: 219 HC----ARASILLGDFFFEKQEMRTALHHFEAVLEQEPN--YISEVLHKIKQCYIALN 270


>gi|209527046|ref|ZP_03275562.1| glycosyl transferase group 1 [Arthrospira maxima CS-328]
 gi|209492557|gb|EDZ92896.1| glycosyl transferase group 1 [Arthrospira maxima CS-328]
          Length = 1671

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 6/69 (8%), Positives = 30/69 (43%), Gaps = 1/69 (1%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++A   + +  +S+A   + +  + +  + ++ + L+  +   +    + +A +  +  +
Sbjct: 578 QQAQTAMDKGEWSEAAGCWRKLWKVYA-SSLSPEVLISISHNLFKLDAFTEAQACLKRVL 636

Query: 122 TQYPESKNV 130
              P+ +  
Sbjct: 637 ASNPQHRKA 645


>gi|192361757|ref|YP_001983772.1| tetratricopeptide repeat domain-containing protein [Cellvibrio
           japonicus Ueda107]
 gi|190687922|gb|ACE85600.1| tetratricopeptide repeat domain protein [Cellvibrio japonicus
           Ueda107]
          Length = 964

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 27/208 (12%), Positives = 54/208 (25%), Gaps = 35/208 (16%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFP------FAGVARKSLLMSAFVQYSA-------GKY 110
                + +++S+A + + Q     P       A  A++     A   Y         G  
Sbjct: 574 GHSLFELKDYSQAEQAYTQVLALHPAHGNKPGAPSAQQVRERIAASIYRQAEASLEFGDK 633

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A S         P++       Y  G+   +        Q              ++Y 
Sbjct: 634 DTAISQLLRITQVTPDTDIAIKAQYDAGLYLME--------QEKWSQAENVYLGFRQKYP 685

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
                      + +               Y  + ++  A     ++  + SD E   +++
Sbjct: 686 QHSLTATLPAKMVLI--------------YQSQEKWQLAADELVVMERSSSDPEVKRQSL 731

Query: 231 ARLVEAYVALALMDEAREVVSLIQERYP 258
               E Y       +A E        YP
Sbjct: 732 YMGAELYEKSGRRTQAIEQYRRYALEYP 759



 Score = 40.5 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 28/218 (12%), Positives = 66/218 (30%), Gaps = 35/218 (16%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-------FAGVARKSLLMSAFVQ 104
            D R    + +     L +Q FS+A     +     P       F+       L+     
Sbjct: 523 ADTRALPVLADAGSDLLAQQRFSEARIVAERVIAWQPPADGKLLFSAW-----LILGHSL 577

Query: 105 YSAGKYQQAASLGEEYITQYPES------KNVDYVYYLVGMSYAQMIR-DVPYDQRATKL 157
           +    Y QA     + +  +P         +   V   +  S  +     + +  + T  
Sbjct: 578 FELKDYSQAEQAYTQVLALHPAHGNKPGAPSAQQVRERIAASIYRQAEASLEFGDKDT-- 635

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
            +  + RI +   ++     A+               + G Y +++ ++  A   +    
Sbjct: 636 AISQLLRITQVTPDTDIAIKAQ--------------YDAGLYLMEQEKWSQAENVYLGFR 681

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
             Y          A++V  Y +      A + + +++ 
Sbjct: 682 QKYPQHSLTATLPAKMVLIYQSQEKWQLAADELVVMER 719



 Score = 38.9 bits (90), Expect = 0.69,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 65/193 (33%), Gaps = 23/193 (11%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
            R    +Y +A   L+  +   A     + ++  P   +A K+   +        K+ QA
Sbjct: 614 ERIAASIYRQAEASLEFGDKDTAISQLLRITQVTPDTDIAIKAQYDAGLYLMEQEKWSQA 673

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
            ++   +  +YP+             +    +  +   Q   +L    +  ++ER ++ P
Sbjct: 674 ENVYLGFRQKYPQHSLTA--------TLPAKMVLIYQSQEKWQLAADEL-VVMERSSSDP 724

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE-EAMAR 232
            VK    Y+                 Y K G    AI +++     Y        EA  +
Sbjct: 725 EVKRQSLYMG-------------AELYEKSGRRTQAIEQYRRYALEYPRPFANNLEAQHK 771

Query: 233 LVEAYVALALMDE 245
           L E Y A    D+
Sbjct: 772 LTELYQATGEQDK 784


>gi|15893706|ref|NP_347055.1| TPR repeat-containing protein [Clostridium acetobutylicum ATCC 824]
 gi|15023268|gb|AAK78395.1|AE007556_5 TPR-repeat-containing protein [Clostridium acetobutylicum ATCC 824]
 gi|325507828|gb|ADZ19464.1| TPR-repeat-containing protein [Clostridium acetobutylicum EA 2018]
          Length = 436

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 41/209 (19%), Positives = 70/209 (33%), Gaps = 19/209 (9%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D  Y+     KA L  K   +  A E +N+            K LL    +      Y++
Sbjct: 141 DPNYKEAYVSKARLEKKLGKYEDALETYNKLENL---EKNNNKILLDMIKINIDMKNYKE 197

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A S  E+ I  YPE  +    YY+ G+     +       +     L+  ++  + Y   
Sbjct: 198 ALSEVEKLIKIYPEESSG---YYIKGV-LVNYLGKSEESLKFINKALRLDTKNPKIYYEK 253

Query: 173 PYVKGARFYVTVGRNQLAA--------KEVEIGR--YYLKRGEYVAAIPRFQLVL--ANY 220
             +             L           E  I R    +K G+Y  A+   + ++   N 
Sbjct: 254 ALIYSNIKKYDKALEFLEETISIDPDYYEAYILRIDILMKTGKYSEAVYYCRTLINRDNT 313

Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREV 249
                  +A  R+  AY A+    +A E+
Sbjct: 314 KMYSAYGKAPYRMYLAYKAMGKKKDADEI 342


>gi|15639635|ref|NP_219085.1| hypothetical protein TP0648 [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189025873|ref|YP_001933645.1| hypothetical protein TPASS_0648 [Treponema pallidum subsp. pallidum
           SS14]
 gi|3322946|gb|AAC65621.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189018448|gb|ACD71066.1| hypothetical protein TPASS_0648 [Treponema pallidum subsp. pallidum
           SS14]
          Length = 682

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 66/217 (30%), Gaps = 38/217 (17%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           ++YE       ++++  A E++     ++  +      +    A   Y+ G+Y QA    
Sbjct: 47  QLYEAGRKAHVQEDWHAAIEFYQEALKKNASYN----LAYRGLAECFYALGEYDQALHHV 102

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
            +          +     L  +    ++     DQ            I+ RY N      
Sbjct: 103 RKAQKL------MAQDLSLEKLCAFSLVGQGELDQ-----ARSLFEEILARYPN-----D 146

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR--------FQLVLANYSDAEHAEEA 229
                      LA  EV  GR    R  Y AA+ R          L L +Y +A H   A
Sbjct: 147 VDARFG-----LAEIEVSKGRLSSARLLYQAALERQAENRKALLSLALISY-EAGHYPRA 200

Query: 230 MARLVEAYVALALMDEA---REVVSLIQERYPQGYWA 263
           +  +  A        +       ++ ++  Y      
Sbjct: 201 LTYVERALQYHGDNAQVHFFAAYLATLRAHYEDAERY 237


>gi|209549954|ref|YP_002281871.1| hypothetical protein Rleg2_2370 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209535710|gb|ACI55645.1| TPR repeat-containing protein [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 1272

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 29/84 (34%), Gaps = 6/84 (7%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
            +++ R++      D  +   +  +   +L+     KA E     S   P      +S L
Sbjct: 517 MKEAKREIDAALAADPSFDIALLARGRYYLQTGERDKALEDLLAASTANPAHS---QSQL 573

Query: 99  MSAFVQYSAGK---YQQAASLGEE 119
           M A   Y  G     +QA    + 
Sbjct: 574 MLAAAHYEKGDRIPSEQAVDNADR 597


>gi|52843050|ref|YP_096849.1| hypothetical protein lpg2854 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52630161|gb|AAU28902.1| hypothetical protein lpg2854 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 308

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 10/70 (14%), Positives = 25/70 (35%), Gaps = 8/70 (11%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
            A    +  ++ +A + FN+            +            GKY++A    ++ + 
Sbjct: 56  AASAAYRAGDYEQAAKLFNELK--------TEQGYYNQGNALAHLGKYEEAIRAYDKALA 107

Query: 123 QYPESKNVDY 132
             P +++  Y
Sbjct: 108 FNPNNQDALY 117


>gi|259417251|ref|ZP_05741170.1| tetratricopeptide TPR_2 repeat protein [Silicibacter sp. TrichCH4B]
 gi|259346157|gb|EEW57971.1| tetratricopeptide TPR_2 repeat protein [Silicibacter sp. TrichCH4B]
          Length = 183

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 37/126 (29%), Gaps = 20/126 (15%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLG 117
           +  +    ++ Q++  A E+    +   P FA   + ++        + A  +  A +  
Sbjct: 66  LLRRGRDAMERQDWPAAIEHLTALTDHAPDFAEGWSERAR-----AFFHAELFGPAVADL 120

Query: 118 EEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
           E  +   P     DY   + +G    +   D                R    +     V 
Sbjct: 121 ERALALNPN----DYNAIFGLGQV-FEFFGDPER-------AYAAYERAKAIHPYHEEVT 168

Query: 177 GARFYV 182
            A   +
Sbjct: 169 KALDRL 174


>gi|219128521|ref|XP_002184460.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217404261|gb|EEC44209.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 686

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 36/125 (28%), Gaps = 17/125 (13%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL----- 98
           RDV      D       Y    L  +   +  A E +         +   R+S +     
Sbjct: 402 RDVLGPEAPDTAASH--YALGQLLSEIGQWDAAVEQYKAAVAIHE-SVYGRQSPITASGY 458

Query: 99  -MSAFVQYSAGKYQQAASLGEEYIT-----QYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
                V Y    Y  A +   + +            +V   +  VG++ AQ       +Q
Sbjct: 459 NNLGAVYYQQQNYAAALTEYRKGLDILQAVLPSNHADVAAAWNNVGLALAQQ---ASREQ 515

Query: 153 RATKL 157
              KL
Sbjct: 516 NVAKL 520


>gi|24374287|ref|NP_718330.1| hypothetical protein SO_2746 [Shewanella oneidensis MR-1]
 gi|24348825|gb|AAN55774.1|AE015714_1 conserved hypothetical protein [Shewanella oneidensis MR-1]
          Length = 250

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 40/124 (32%), Gaps = 22/124 (17%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
              KY  A      +I QYP+S       Y +G                     Q  + +
Sbjct: 140 KERKYDDAIPAFRAFIKQYPDSVYAANANYWLGQLLFNKSEFA--------EAKQVFNTV 191

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           V R+++S     +   + +                 K G+   A   +Q V+ +Y+++  
Sbjct: 192 VTRFSDSNKRGDSLVKLGMIAE--------------KTGDKAGATQYYQQVVKDYANSAA 237

Query: 226 AEEA 229
           A  A
Sbjct: 238 ARIA 241



 Score = 35.5 bits (81), Expect = 7.4,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 47/131 (35%), Gaps = 17/131 (12%)

Query: 61  YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE- 118
           YE AV   LKE+ +  A   F    + +P +  A  +      + ++  ++ +A  +   
Sbjct: 131 YESAVNLVLKERKYDDAIPAFRAFIKQYPDSVYAANANYWLGQLLFNKSEFAEAKQVFNT 190

Query: 119 ---EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
               +        +         +    MI +   D+       QY  ++V+ Y NS   
Sbjct: 191 VVTRFSDSNKRGDS---------LVKLGMIAEKTGDKAG---ATQYYQQVVKDYANSAAA 238

Query: 176 KGARFYVTVGR 186
           + A+  +   +
Sbjct: 239 RIAQQQLAAIK 249


>gi|153826257|ref|ZP_01978924.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|229520295|ref|ZP_04409721.1| hypothetical protein VIF_000815 [Vibrio cholerae TM 11079-80]
 gi|229523852|ref|ZP_04413257.1| hypothetical protein VCA_001431 [Vibrio cholerae bv. albensis
           VL426]
 gi|254224968|ref|ZP_04918583.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|297579353|ref|ZP_06941281.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|125622656|gb|EAZ50975.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|149740022|gb|EDM54197.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|229337433|gb|EEO02450.1| hypothetical protein VCA_001431 [Vibrio cholerae bv. albensis
           VL426]
 gi|229342661|gb|EEO07653.1| hypothetical protein VIF_000815 [Vibrio cholerae TM 11079-80]
 gi|297536947|gb|EFH75780.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 254

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 20/146 (13%), Positives = 57/146 (39%), Gaps = 10/146 (6%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
              S+ +    + +    ++  Y+ AV   LK+++++ A   F +   D+P +  +  + 
Sbjct: 118 PTSSNDEAAQGTFSSDANEQAAYQNAVDLILKKRDYAGAIAAFQKFQTDYPNSTFSANAH 177

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
                + ++  + ++AA      ++    +K  D       +     + D+       + 
Sbjct: 178 YWLGQLYFAKKEDKEAAKSFAAVVSDKGSNKRAD------ALV---KLGDIAKRNNNAEQ 228

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVT 183
             ++  + V+ Y +S   K A+  + 
Sbjct: 229 ARKFYQQAVDEYPDSASAKIAKENLK 254



 Score = 38.6 bits (89), Expect = 0.92,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 46/130 (35%), Gaps = 15/130 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            Q   D+   +R     +    +    Y NS +   A +++              G+ Y 
Sbjct: 140 YQNAVDLILKKRDYAGAIAAFQKFQTDYPNSTFSANAHYWL--------------GQLYF 185

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + E   A   F  V+++   +    +A+ +L +        ++AR+      + YP   
Sbjct: 186 AKKEDKEAAKSFAAVVSD-KGSNKRADALVKLGDIAKRNNNAEQARKFYQQAVDEYPDSA 244

Query: 262 WARYVETLVK 271
            A+  +  +K
Sbjct: 245 SAKIAKENLK 254



 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 39/126 (30%), Gaps = 27/126 (21%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               Y  A +  +++ T YP S      +Y +G  Y     D        K   +  + +
Sbjct: 149 KKRDYAGAIAAFQKFQTDYPNSTFSANAHYWLGQLYFAKKED--------KEAAKSFAAV 200

Query: 166 VERYTNSPYVKGARFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
           V    ++     A   +     RN  A +                A   +Q  +  Y D+
Sbjct: 201 VSDKGSNKRA-DALVKLGDIAKRNNNAEQ----------------ARKFYQQAVDEYPDS 243

Query: 224 EHAEEA 229
             A+ A
Sbjct: 244 ASAKIA 249


>gi|108760283|ref|YP_633956.1| hypothetical protein MXAN_5819 [Myxococcus xanthus DK 1622]
 gi|108464163|gb|ABF89348.1| conserved domain protein [Myxococcus xanthus DK 1622]
          Length = 370

 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 25/68 (36%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
           V  D   D     E++          +F +A  YF +    FP +   R +L  +     
Sbjct: 38  VTADLELDKLNDEELFAGGTSAFAANDFQQAARYFGRLVDFFPDSRHRRAALYNAGLAHQ 97

Query: 106 SAGKYQQA 113
              ++++A
Sbjct: 98  RIKEWEEA 105


>gi|37523662|ref|NP_927039.1| kinesin light chain [Gloeobacter violaceus PCC 7421]
 gi|35214667|dbj|BAC92034.1| glr4093 [Gloeobacter violaceus PCC 7421]
          Length = 510

 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 77/229 (33%), Gaps = 60/229 (26%)

Query: 64  AVLFLKEQNFSKAYEY-FNQCSRD----------FPFAGVARKSLL-MSAFVQYSAGK-- 109
           A L L + ++ +A +       ++          +P       + L   A V ++ G+  
Sbjct: 259 AKLRLAQGDYGQAEDLCLESLRQNERLSGGKSPDYP-------ANLTNLAAVYHAQGRLW 311

Query: 110 -----YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
                YQQA ++ ++ + ++    +         ++    +  +  DQ   +       R
Sbjct: 312 EAVEMYQQALAVQQDLLGEH--HPDT--------LTTLNNLAVLYRDQNRLEEAQNLFER 361

Query: 165 IV---ERYTNSPYVKGARFYVTVGRNQLAAKEVEIG-RYYLKRGEYVAAIPRFQLVLANY 220
           ++   ER + S +   A     + + +LA  ++    R YL          R   +   +
Sbjct: 362 VLKERERLSGSEHPDVAIVLNNLAQLRLARSDLAGAERLYL----------RALELFVKF 411

Query: 221 --SDAEHAEEAMARLVEAYVALALMDEAREVVSL--------IQERYPQ 259
              D  +   A+  L E         +A E++          + E +P 
Sbjct: 412 LGPDHPNVATALNNLAELQRRSGNDQQAEELLKRALSLRQYALGENHPD 460


>gi|163738351|ref|ZP_02145766.1| Tetratricopeptide TPR_2 [Phaeobacter gallaeciensis BS107]
 gi|163742232|ref|ZP_02149620.1| hypothetical protein RG210_03438 [Phaeobacter gallaeciensis 2.10]
 gi|161384562|gb|EDQ08943.1| hypothetical protein RG210_03438 [Phaeobacter gallaeciensis 2.10]
 gi|161388272|gb|EDQ12626.1| Tetratricopeptide TPR_2 [Phaeobacter gallaeciensis BS107]
          Length = 280

 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 23/61 (37%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           ++  ++ A   L    + +A E F   ++ +P + +A              G  ++AA  
Sbjct: 157 EQADFDAAKAALDSGAYQEAAEKFAAFTQAYPGSPLAAAVEYNRGKALDGLGDTREAARA 216

Query: 117 G 117
            
Sbjct: 217 Y 217


>gi|153003360|ref|YP_001377685.1| lytic transglycosylase catalytic subunit [Anaeromyxobacter sp.
           Fw109-5]
 gi|152026933|gb|ABS24701.1| Lytic transglycosylase catalytic [Anaeromyxobacter sp. Fw109-5]
          Length = 748

 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 27/64 (42%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
               ++  A L L+    + A E   Q +  +     A ++L   A+   +AG +++A +
Sbjct: 342 ADDALFFAAELDLRGGRRAVALERLEQVAARYATGNFAPEALFRLAWEHRTAGAHEEALA 401

Query: 116 LGEE 119
             + 
Sbjct: 402 ALDR 405



 Score = 35.9 bits (82), Expect = 5.5,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 30/100 (30%), Gaps = 14/100 (14%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           +  ++    +   Y    +   A                      L+ G    A+ R + 
Sbjct: 323 QDAVRTYEALAHEYPGHAFADDAL--------------FFAAELDLRGGRRAVALERLEQ 368

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           V A Y+    A EA+ RL   +      +EA   +  +  
Sbjct: 369 VAARYATGNFAPEALFRLAWEHRTAGAHEEALAALDRLDR 408


>gi|313676683|ref|YP_004054679.1| hypothetical protein [Marivirga tractuosa DSM 4126]
 gi|312943381|gb|ADR22571.1| tetratricopeptide domain protein [Marivirga tractuosa DSM 4126]
          Length = 278

 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 10/62 (16%), Positives = 25/62 (40%), Gaps = 3/62 (4%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
            D   +  ++   +L ++   + KA E F +  +  P      ++    A    ++G+  
Sbjct: 193 EDPNNEEALFNLGILSIQSGQYGKAIERFEKLLKRHPEN---VQAEFYLALSLMNSGQKA 249

Query: 112 QA 113
           +A
Sbjct: 250 KA 251


>gi|257458256|ref|ZP_05623406.1| tetratricopeptide repeat domain protein [Treponema vincentii ATCC
           35580]
 gi|257444366|gb|EEV19459.1| tetratricopeptide repeat domain protein [Treponema vincentii ATCC
           35580]
          Length = 137

 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 30/76 (39%), Gaps = 1/76 (1%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA-RKSLLMSAFVQYSAG 108
            + +     ++ +KA       N+  A  Y+    + FP    A   +    A +     
Sbjct: 29  EIPEDSSPADLTQKAQEAFDSGNYRAARVYYEVILKRFPTDESACIAAQYEIAHLHIKKH 88

Query: 109 KYQQAASLGEEYITQY 124
           +++ A ++ E+ I QY
Sbjct: 89  QWKAAYAILEKIIAQY 104


>gi|126331490|ref|XP_001376771.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 439

 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 38/108 (35%), Gaps = 10/108 (9%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDF-PFAGVAR--KSLLMSAFVQYSAGKYQQAASLGEEY 120
           A   L  +N+ KA     +          +    ++        + AG+++ A S    +
Sbjct: 187 AEKMLSNKNYKKAIRILLKARERAKEGGDMKMEGEAAYDLGLAYHKAGEFELAKSALNVF 246

Query: 121 ITQYPESKNVDYVYYLVGMSY-AQMIRDVPYDQRATKLMLQYMSRIVE 167
                 S  +D     +G+S   + I  V   Q      L ++ ++VE
Sbjct: 247 SDI---SIALDDA---IGLSRAYEAIAKVLVSQENMLEALAFLEKVVE 288


>gi|113476439|ref|YP_722500.1| hypothetical protein Tery_2853 [Trichodesmium erythraeum IMS101]
 gi|110167487|gb|ABG52027.1| TPR repeat [Trichodesmium erythraeum IMS101]
          Length = 3172

 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 41/106 (38%), Gaps = 22/106 (20%)

Query: 71   QNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE- 126
               ++A +Y+ +      +F ++          A + +   K+ +A +    ++   P+ 
Sbjct: 2191 GKLNEAIKYYQKAIYLEPNFAWSYY------NLAELCFLLEKWDEAVNAYRRFMEIQPDF 2244

Query: 127  SKNVD----YVYYL-------VGMSYAQM-IRDVPYDQRATKLMLQ 160
            S  V+       +          +SY +  IR+ P D ++ +  L+
Sbjct: 2245 SPEVEEKLNQALHQQVQGKLEQALSYYRQGIRNDPTDVKSYEKALE 2290


>gi|311257765|ref|XP_003127282.1| PREDICTED: serine/threonine-protein phosphatase 5-like [Sus scrofa]
          Length = 499

 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 20/153 (13%), Positives = 45/153 (29%), Gaps = 25/153 (16%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQ 104
              +   ++   E+  +A  + K +++  A ++++Q     P        +SL       
Sbjct: 18  EPPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSL-----AY 72

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
                Y  A +     I       +  Y+  YY    S   +           +  L+  
Sbjct: 73  LRTECYGYALADATRAIEM-----DKKYIKGYYRRAASNMAL--------GKFRAALRDY 119

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
             +V+   +      A+         +  K  E
Sbjct: 120 QTVVKVKPHDK---DAKMKYQECNKIVKQKAFE 149


>gi|260462445|ref|ZP_05810652.1| TPR repeat-containing protein [Mesorhizobium opportunistum WSM2075]
 gi|259031641|gb|EEW32910.1| TPR repeat-containing protein [Mesorhizobium opportunistum WSM2075]
          Length = 593

 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 44/136 (32%), Gaps = 15/136 (11%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
               L   + + A  +F +  R  PF      +L   A        +  A S  +  +  
Sbjct: 466 GSARLLLGDAAGAIPFFVETERLSPFDLYRFHNLGELAAAYSFLEDWPSAISTADRSLDL 525

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
            P      Y Y     S    I  +    R  +  ++ ++ ++ R+ +  + +    ++ 
Sbjct: 526 SPG-----YFY-----SRFLKIGALARSGRK-QEAMRELAILMTRHPD--FSEQRVRWIP 572

Query: 184 VGRNQLAAKEVEIGRY 199
                 AA E  I  +
Sbjct: 573 FVDK--AANEFLIANF 586


>gi|225620550|ref|YP_002721807.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
 gi|225215369|gb|ACN84103.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
          Length = 767

 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 64/190 (33%), Gaps = 56/190 (29%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM-------SAFVQYSAGKYQQ 112
           +Y K  + ++ + +  A  YF +          A+K  +             ++  +Y +
Sbjct: 44  LY-KGQVCVELKEYEDAVRYFEE----------AKKVDIKTFKSYNLLGISYHAIKQYDK 92

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A     E +   P S      Y L+G+SY +         +     ++  ++ +E     
Sbjct: 93  AIECFNETLKITPNSFK---AYNLLGISYFEK--------KDYTNAIENFNKAIEINP-- 139

Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
                         N LA        +Y K  +Y  AI  F+        ++  +E   R
Sbjct: 140 --------KYDKAFNNLA-------LFYYKNKKYNEAIEFFEH-------SKSLDE---R 174

Query: 233 LVEAYVALAL 242
           + +AY  L +
Sbjct: 175 VFKAYDMLGM 184



 Score = 40.5 bits (94), Expect = 0.24,   Method: Composition-based stats.
 Identities = 36/257 (14%), Positives = 69/257 (26%), Gaps = 70/257 (27%)

Query: 69  KEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
             + + KA  YFN+    +  +       K+    A   Y+   Y  A     + I    
Sbjct: 324 SNEEYDKAINYFNKSIEINDRY------YKAYNNLALAYYNLKDYNNAIENFNKSIDINN 377

Query: 126 ESKNVDYVYYLVGMSY--------------------------AQMIRDVPYDQRATKLML 159
            + +    Y  +G+SY                           +++  + YD       L
Sbjct: 378 NNADS---YNGIGLSYYHLGEKEKSLIYLNKALELNPSYSNSYEILFSIYYDLEEYDNAL 434

Query: 160 QYMSRIVERYTNS---------------------PYVKGARFYVTVGRNQLAAKEVEIGR 198
               +I+E   NS                      Y            N LA        
Sbjct: 435 NIADKIIEVNPNSFKYYDKLLSICFDNKDHNKVIEYASRTDKRNDDIYNMLAES------ 488

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM---ARLVEAYVA-LALMDEAREVVSLIQ 254
            Y +  +Y ++   +  ++ N   +      +     L + Y   L       +   L +
Sbjct: 489 -YYRIKDYDSSSICYNKLIENKKSSFELYNNLAVIYYLKKDYDMLLNTYQRYIDNFDLKE 547

Query: 255 ERYPQGYWARYVETLVK 271
           + +          TL+K
Sbjct: 548 DNFASYNIFLLSYTLLK 564



 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 43/109 (39%), Gaps = 22/109 (20%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
            + + ++++++ A E FN+     P      K+    A   Y   KY +A    E     
Sbjct: 115 GISYFEKKDYTNAIENFNKAIEINP--KY-DKAFNNLALFYYKNKKYNEAIEFFEH---- 167

Query: 124 YPESKNVDY----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
              SK++D      Y ++GMSY   I +           ++  ++ ++ 
Sbjct: 168 ---SKSLDERVFKAYDMLGMSYYN-INNYD-------KAIECFTKFLQY 205


>gi|168068003|ref|XP_001785887.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162662441|gb|EDQ49296.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 261

 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 50/150 (33%), Gaps = 23/150 (15%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLL--MS 100
           +D+     +      E +E   + L+++ +  A +Y      +       A  + +    
Sbjct: 119 KDLQDQVRSGEASSEEFFELGAVMLRKKYYVLANKYLEQAIKKWD--GDEADLAQVYNAL 176

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLM 158
            F  +   K  +A +L E+ +   P      Y   +Y +G  Y     +V  D    K  
Sbjct: 177 GFSYFRDNKLDEAINLFEKAVKLRPG-----YVIAWYNLGNVY-----EVKKD---FKNA 223

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           L+     +    N+     A+      + +
Sbjct: 224 LKAYEESLLFDPNNK---IAQRRRDAIKER 250


>gi|163738509|ref|ZP_02145924.1| Tetratricopeptide TPR_2 [Phaeobacter gallaeciensis BS107]
 gi|161388430|gb|EDQ12784.1| Tetratricopeptide TPR_2 [Phaeobacter gallaeciensis BS107]
          Length = 189

 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 16/127 (12%), Positives = 41/127 (32%), Gaps = 20/127 (15%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLG 117
           + ++    L+  +   A E+    +   P    G   ++        ++AG +  A +  
Sbjct: 72  LLKRGKDALERGDTRIAIEHLTALTDHAPGFATGWYERAR-----AYFTAGLFGPAVADL 126

Query: 118 EEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
           E+ +   P     DY   + +G +  +   D        +   +   R    + +   + 
Sbjct: 127 EQTLMLNPN----DYNAIFALG-AMFEQFNDP-------QNAYEAYKRAQAIHPHHEAIT 174

Query: 177 GARFYVT 183
            A   + 
Sbjct: 175 NALDRLK 181


>gi|119489751|ref|ZP_01622509.1| hypothetical protein L8106_10407 [Lyngbya sp. PCC 8106]
 gi|119454325|gb|EAW35475.1| hypothetical protein L8106_10407 [Lyngbya sp. PCC 8106]
          Length = 276

 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 13/82 (15%)

Query: 64  AVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE- 119
              + +   +  A +      +   D P       +L       Y  GKY QA +  E+ 
Sbjct: 104 GEAYFRNGKYQAAIDQIEAGLKVRSDVPG------ALFDLGNAYYMLGKYDQAIAQYEKA 157

Query: 120 YIT---QYPESKNVDYVYYLVG 138
           +      +P   N+  V+Y  G
Sbjct: 158 FAQEKNLWPAINNIGLVHYERG 179


>gi|91203286|emb|CAJ72925.1| hypothetical protein kustd2180 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 408

 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 62/202 (30%), Gaps = 40/202 (19%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
            +   Y + +  +  + + KA     +     R++        +     + +   G Y  
Sbjct: 228 SEEAFYGEGIFLIGNEEYEKAISLLEKAITKDRNYAH------AYFQIGYCKNKLGNYPD 281

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A    ++ +   PE       ++ +GM+Y          Q+  K  ++ +   V    N+
Sbjct: 282 AIKNLKQAVRLKPEFPEG---HFQLGMAYFM--------QKQYKGAVESLLDAVRS--NA 328

Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
            +   A F + +    L      I         Y  AI   + V           E    
Sbjct: 329 QFF-EAYFMLGLAYTALERHRDAI-------EAYWQAIGINKDV----------PEVHFH 370

Query: 233 LVEAYVALALMDEAREVVSLIQ 254
           L  AY+       A E   +++
Sbjct: 371 LGMAYLQTKNKLMAYEEYKVLK 392



 Score = 35.9 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 20/140 (14%), Positives = 46/140 (32%), Gaps = 22/140 (15%)

Query: 32  VCFLVGWERQSSRDVYLDSV--TDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRD 86
             FL+G E        L+     D  Y    ++      K  N+  A +      +   +
Sbjct: 236 GIFLIGNEEYEKAISLLEKAITKDRNYAHAYFQIGYCKNKLGNYPDAIKNLKQAVRLKPE 295

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
           FP         L  A+  +   +Y+ A     + +    +       Y+++G++Y  + R
Sbjct: 296 FPEGHF----QLGMAY--FMQKQYKGAVESLLDAVRSNAQFFE---AYFMLGLAYTALER 346

Query: 147 DVPYDQRATKLMLQYMSRIV 166
                    +  ++   + +
Sbjct: 347 H--------RDAIEAYWQAI 358


>gi|29169122|gb|AAO66300.1| hypothetical TPR-like protein [Myxococcus xanthus]
          Length = 370

 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 25/68 (36%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
           V  D   D     E++          +F +A  YF +    FP +   R +L  +     
Sbjct: 38  VTADLELDKLNDEELFAGGTSAFAANDFQQAARYFGRLVDFFPDSRHRRAALYNAGLAHQ 97

Query: 106 SAGKYQQA 113
              ++++A
Sbjct: 98  RIKEWEEA 105


>gi|54295678|ref|YP_128093.1| hypothetical protein lpl2766 [Legionella pneumophila str. Lens]
 gi|53755510|emb|CAH17009.1| hypothetical protein lpl2766 [Legionella pneumophila str. Lens]
          Length = 278

 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 10/70 (14%), Positives = 25/70 (35%), Gaps = 8/70 (11%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
            A    +  ++ +A + FN+            +            GKY++A    ++ + 
Sbjct: 56  AASAAYRAGDYEQAAKLFNELK--------TEQGYYNQGNALAHLGKYEEAIRAYDKALA 107

Query: 123 QYPESKNVDY 132
             P +++  Y
Sbjct: 108 FNPNNQDALY 117


>gi|302341691|ref|YP_003806220.1| hypothetical protein Deba_0249 [Desulfarculus baarsii DSM 2075]
 gi|301638304|gb|ADK83626.1| hypothetical protein Deba_0249 [Desulfarculus baarsii DSM 2075]
          Length = 188

 Score = 41.3 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 26/72 (36%), Gaps = 7/72 (9%)

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A +  E  I+ +P+S       +L G++  +      +       +     ++ E Y  S
Sbjct: 124 ALNHLERVISLHPKSAAAAEAVFLRGVAGYRQSAQALH-------LKSAYRKLTEEYPTS 176

Query: 173 PYVKGARFYVTV 184
            +   AR Y   
Sbjct: 177 VWAGRARPYKNF 188



 Score = 36.2 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 1/68 (1%)

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA-YVALALMDEAREVVSLIQE 255
            ++ +    ++ A+   + V++ +  +  A EA+     A Y   A     +     + E
Sbjct: 112 AKFEMLERRWLGALNHLERVISLHPKSAAAAEAVFLRGVAGYRQSAQALHLKSAYRKLTE 171

Query: 256 RYPQGYWA 263
            YP   WA
Sbjct: 172 EYPTSVWA 179


>gi|148906849|gb|ABR16570.1| unknown [Picea sitchensis]
          Length = 441

 Score = 41.3 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 55/178 (30%), Gaps = 36/178 (20%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD----- 86
           VC L G  R              R   ++ ++A   L   N+S+A   + Q  +      
Sbjct: 270 VCQLCGCGRNEEETKK-----QARKVDKLGKEASKLLSSGNYSEARSLYEQIQQLQTQLW 324

Query: 87  FPFAGVARKSLLMSAFVQYS----AGKYQQAAS----LGEEYITQYPE-SKNVDYVYYLV 137
            P++ +    LL +             ++QA          Y   YP           ++
Sbjct: 325 HPYSVI----LLRTGDTLLKICMELYDWKQALKYCRLTIPAYERAYPTCHP-------MM 373

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT-----NSPYVKGARFYVTVGRNQLA 190
           G+ Y    + + +    T   L +  +  +  T     NS ++      +     + A
Sbjct: 374 GLQYYACGK-LEWFLENTLEALNFFEKAAKILTVTHGRNSEFLTQLFDRIQEAHAEAA 430


>gi|119485998|ref|ZP_01620060.1| hypothetical protein L8106_05740 [Lyngbya sp. PCC 8106]
 gi|119456773|gb|EAW37901.1| hypothetical protein L8106_05740 [Lyngbya sp. PCC 8106]
          Length = 807

 Score = 41.3 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 26/64 (40%), Gaps = 1/64 (1%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           E  +  LK++ + KA  +    +   P      ++ +            Q+A +L +  +
Sbjct: 23  ETGLAALKQKQYQKAITHLEAIAESQPHRSAGMRAKMALVVAYERTRNLQKAIALCQN-L 81

Query: 122 TQYP 125
           TQ+P
Sbjct: 82  TQHP 85


>gi|120437826|ref|YP_863512.1| TPR repeat-containing protein [Gramella forsetii KT0803]
 gi|117579976|emb|CAL68445.1| secreted protein containing tetratricopeptide repeats [Gramella
           forsetii KT0803]
          Length = 594

 Score = 41.3 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 43/120 (35%), Gaps = 8/120 (6%)

Query: 67  FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
             +++N  +A +  +    +     +  ++LL  A +      ++ A    +  I  + +
Sbjct: 478 AFQKKN-GEAIKALDSILINHKGEKIEDEALLSQAKLYEKEEDFKSAEKNYQIIIHNFND 536

Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
               D  +Y +   YA  ++D                +I+  + +S Y   AR    + R
Sbjct: 537 DILADNAHYFLAELYANQLQDPER-------AKSLYEQIIFNFADSIYFVEARKKYRMLR 589


>gi|301610321|ref|XP_002934687.1| PREDICTED: LOW QUALITY PROTEIN: WD and tetratricopeptide repeats
           protein 1-like [Xenopus (Silurana) tropicalis]
          Length = 664

 Score = 41.3 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 13/115 (11%), Positives = 36/115 (31%), Gaps = 21/115 (18%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYS---AGKYQQAASL 116
           +KA      Q +S+A E +++  +  P +     ++L    A         G +  A   
Sbjct: 353 QKANDAFARQQWSQAIELYSEAVQRAPGS-----AMLYGNRAAAYMKRKWDGDHYDALRD 407

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
             + +   P        ++ +     ++              L+ +     ++ +
Sbjct: 408 CLQALALNPAHLK---AHFRLARCLFELH--------YVSEALECLEEFKVKFPD 451


>gi|115373453|ref|ZP_01460750.1| tetratricopeptide repeat domain protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|115369459|gb|EAU68397.1| tetratricopeptide repeat domain protein [Stigmatella aurantiaca
           DW4/3-1]
          Length = 216

 Score = 41.3 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 17/128 (13%), Positives = 37/128 (28%), Gaps = 13/128 (10%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEEYITQYPESK 128
            +   A +      +  P     + + L    A + +    Y Q          ++  S 
Sbjct: 25  NDLRGAIDQLTAALQRNP----PQGAELHYQVAKLYFELADYAQCELEATRLAERFATSA 80

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
            VD   +L   +   M       +   +   +  + +  R+ +S     A   +   R +
Sbjct: 81  YVDDALFLRAQAIQMM-------EGRRQEASRAYADLRTRFPDSELAAHATVEMGRLRAE 133

Query: 189 LAAKEVEI 196
               E  I
Sbjct: 134 AGENEKAI 141



 Score = 37.0 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 10/78 (12%), Positives = 30/78 (38%), Gaps = 1/78 (1%)

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL-ALMDEARE 248
           A    ++ + Y +  +Y         +   ++ + + ++A+    +A   +     EA  
Sbjct: 46  AELHYQVAKLYFELADYAQCELEATRLAERFATSAYVDDALFLRAQAIQMMEGRRQEASR 105

Query: 249 VVSLIQERYPQGYWARYV 266
             + ++ R+P    A + 
Sbjct: 106 AYADLRTRFPDSELAAHA 123


>gi|86741850|ref|YP_482250.1| hypothetical protein Francci3_3164 [Frankia sp. CcI3]
 gi|86568712|gb|ABD12521.1| hypothetical protein Francci3_3164 [Frankia sp. CcI3]
          Length = 233

 Score = 41.3 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 46/111 (41%), Gaps = 14/111 (12%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y + +  L   + + A +         P +   R++    A  Q++AG+Y  A       
Sbjct: 119 YTRGMALLGHGDANAAVQLLAHAVAAEPASPSVREA---LARAQFTAGQYGAARETFAWI 175

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           + ++P     DY  + +G+S A+ I D+       +  +++++  V    +
Sbjct: 176 VDRHPTD---DYAQFGLGLS-ARKIGDL-------RAAVEHLALAVAMRPD 215


>gi|154152113|ref|NP_001093815.1| prolyl 3-hydroxylase 2 [Bos taurus]
 gi|151556332|gb|AAI48130.1| LEPREL1 protein [Bos taurus]
 gi|296491295|gb|DAA33358.1| prolyl 3-hydroxylase 2 [Bos taurus]
          Length = 706

 Score = 41.3 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 31/68 (45%), Gaps = 6/68 (8%)

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           F  Y  G+Y +A    + Y+  +P+ ++V     L  + Y + +     D  A+    + 
Sbjct: 312 FAYYRVGEYIKALECAKAYLLLHPDDEDV-----LDNVDYYESLLGDSADP-ASIEARED 365

Query: 162 MSRIVERY 169
           ++  V+R+
Sbjct: 366 LAMFVKRH 373


>gi|262199647|ref|YP_003270856.1| hypothetical protein Hoch_6494 [Haliangium ochraceum DSM 14365]
 gi|262082994|gb|ACY18963.1| hypothetical protein Hoch_6494 [Haliangium ochraceum DSM 14365]
          Length = 823

 Score = 41.3 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 64/186 (34%), Gaps = 34/186 (18%)

Query: 100 SAFVQ--YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
               Q  +  G Y  AA +  +Y+  +P S++     + +  S  +    +         
Sbjct: 85  LIDAQVAHGTGDYDTAAVMLYDYVESHPRSRSYASALFYLADSLFERGDHL--------A 136

Query: 158 MLQYMSRIVERY-TNSPYVKGARFYVTVGRNQLA-AKEVEIGRY---------------- 199
             +    ++ R   +S + +     +      LA   + ++ R+                
Sbjct: 137 ARERFVELLTRIGPHSSFYQQTLERLIEL--SLALRDDTDVARWLAALDQVPAERLRPSV 194

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAE----HAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           +  RG+Y     R Q  + +++       +  +A   L  AYVA   ++ A  V   +  
Sbjct: 195 HYVRGKYAYFRDRHQQAIDHFARVPIPAEYFFQARYFLGGAYVAQGNLELAEAVYRDLVA 254

Query: 256 RYPQGY 261
           R P+G 
Sbjct: 255 RPPRGK 260


>gi|94968710|ref|YP_590758.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94550760|gb|ABF40684.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
           Ellin345]
          Length = 942

 Score = 41.3 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 25/69 (36%), Gaps = 3/69 (4%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A +   + N+  A +        +P   V R        + +   KY QA +  ++ +  
Sbjct: 792 ARVLRSDGNYDGAAQELQAVLAQYPKDRVVRN---DLGRIYFLQRKYDQAIAELQQVMEV 848

Query: 124 YPESKNVDY 132
            PE    +Y
Sbjct: 849 DPEDLQANY 857



 Score = 35.9 bits (82), Expect = 7.0,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 36/135 (26%), Gaps = 36/135 (26%)

Query: 152 QRATKLMLQYMSRIVERYTNSPY-----------------VKGARFYVTVGRNQLAAKEV 194
           Q   K       ++ E   N+P                   +            LA    
Sbjct: 730 QGDLKGAAAAFVKVTEADPNNPDGWVNLGRVAVQEGDMERAREVLTKALKINANLAR--- 786

Query: 195 EIGRYYLKR-----GEYVAAIPRFQLVLANYSDAEHAEEAM---ARLVEAYVALALMDEA 246
              R++  R     G Y  A    Q VLA Y         +     L   Y     + E 
Sbjct: 787 --ARFFYARVLRSDGNYDGAAQELQAVLAQYPKDRVVRNDLGRIYFLQRKYDQ--AIAEL 842

Query: 247 REVVSL----IQERY 257
           ++V+ +    +Q  Y
Sbjct: 843 QQVMEVDPEDLQANY 857


>gi|20088978|ref|NP_615053.1| hypothetical protein MA0079 [Methanosarcina acetivorans C2A]
 gi|19913828|gb|AAM03533.1| hypothetical protein (multi-domain) [Methanosarcina acetivorans
           C2A]
          Length = 845

 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 63/190 (33%), Gaps = 46/190 (24%)

Query: 66  LFLKEQN---FSKAYEYFNQCSRDFPFAGVAR----KSLLMSAFVQYSAGKYQQAASLGE 118
             L   N   + K  + F++     P    A      +L++         +Y++A  + +
Sbjct: 549 DLLDSGNVTIYKKLLKAFDKILDLNPEDEYALSRKGNALIIL-------ERYEEATEVLD 601

Query: 119 EYITQYPESKNVDYVYYLVG--MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
             +   PE +   Y     G  +++ +            +  ++  ++++     + Y  
Sbjct: 602 SILDLNPEDE---YALLRKGYVLNHLER----------YEEAVEVFTKLLNLNPENEYA- 647

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                       L+ K    G        Y  AI  F  V    S+     E+   L+EA
Sbjct: 648 ------------LSGK----GHTLFSLERYEEAIEMFVKVKNITSNESFKFESTLELIEA 691

Query: 237 YVALALMDEA 246
           Y++L  +  A
Sbjct: 692 YLSLDQVAGA 701



 Score = 35.9 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 38/100 (38%), Gaps = 8/100 (8%)

Query: 49  DSVTDVRYQRE--VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
           D + D+  + E  +  K    +  + + +A E  +      P    A   LL   +V   
Sbjct: 567 DKILDLNPEDEYALSRKGNALIILERYEEATEVLDSILDLNPEDEYA---LLRKGYVLNH 623

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
             +Y++A  +  + +   PE++   Y     G +   + R
Sbjct: 624 LERYEEAVEVFTKLLNLNPENE---YALSGKGHTLFSLER 660


>gi|218261921|ref|ZP_03476589.1| hypothetical protein PRABACTJOHN_02260 [Parabacteroides johnsonii
           DSM 18315]
 gi|218223697|gb|EEC96347.1| hypothetical protein PRABACTJOHN_02260 [Parabacteroides johnsonii
           DSM 18315]
          Length = 228

 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 10/69 (14%), Positives = 22/69 (31%), Gaps = 3/69 (4%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++A +   ++++ KA E +    +       A           Y   K   A    E  +
Sbjct: 45  KEAEVAYTKEDYGKAIELYEGLLKTH--GESAE-IYYNLGNAYYKENKIAPAILNYERAL 101

Query: 122 TQYPESKNV 130
              P   ++
Sbjct: 102 LLDPGDGDI 110


>gi|196233636|ref|ZP_03132477.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
 gi|196222306|gb|EDY16835.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
          Length = 752

 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/117 (12%), Positives = 34/117 (29%), Gaps = 18/117 (15%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           +       +     +A + F + +   P    A ++           G++ +A +  +  
Sbjct: 78  FNLGNALSELGRMEEAADAFGRATELQP--DYA-QAHHNLGSALAKRGRFDEAIAAFQRA 134

Query: 121 ITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
           I   P     DY   Y  +G++     R    D       L    + +    +    
Sbjct: 135 IELKP-----DYASAYNNLGLALKAQAR---RD-----EALAAFQQAIALQPDHAEA 178


>gi|168214778|ref|ZP_02640403.1| tetratricopeptide repeat protein [Clostridium perfringens CPE str.
           F4969]
 gi|170713792|gb|EDT25974.1| tetratricopeptide repeat protein [Clostridium perfringens CPE str.
           F4969]
          Length = 475

 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 20/144 (13%), Positives = 47/144 (32%), Gaps = 14/144 (9%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM--SAF---- 102
           +++      +++Y K     KE+ +  A + F +    + F+     S L     +    
Sbjct: 340 ENLMKTDGVKDLYLKGSDLFKEKKYEDALKDFEKA---YAFSS---DSYLRPHLIYFMGT 393

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
              +  K  +A    +EY+  Y    + +   Y        +       +  +    +Y 
Sbjct: 394 SYENLDKNTEAIKYFQEYLKDYKAKPDAEDFMY-TPQCLYNLAILYNK-EGNSAESKKYA 451

Query: 163 SRIVERYTNSPYVKGARFYVTVGR 186
             I   Y N+ +       +  G+
Sbjct: 452 QEIENDYPNTMFYNDVTKKIIYGK 475



 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 27/73 (36%), Gaps = 6/73 (8%)

Query: 200 YLKRGEYVAAIPRFQLVLANY---SDAE---HAEEAMARLVEAYVALALMDEAREVVSLI 253
           Y    +   AI  FQ  L +Y    DAE   +  + +  L   Y       E+++    I
Sbjct: 395 YENLDKNTEAIKYFQEYLKDYKAKPDAEDFMYTPQCLYNLAILYNKEGNSAESKKYAQEI 454

Query: 254 QERYPQGYWARYV 266
           +  YP   +   V
Sbjct: 455 ENDYPNTMFYNDV 467


>gi|113478145|ref|YP_724206.1| TPR repeat-containing serine/threonine protein kinase
           [Trichodesmium erythraeum IMS101]
 gi|110169193|gb|ABG53733.1| serine/threonine protein kinase with TPR repeats [Trichodesmium
           erythraeum IMS101]
          Length = 738

 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 74/253 (29%), Gaps = 65/253 (25%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           +D          Y+   Y++A+++ +  N  KA     Q  R  P      ++      +
Sbjct: 403 KDYTAGIKIKANYEDAYYQRALVYYELDNKDKAMTDLTQTLRINP--NYT-QAYKKRGLI 459

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNV-------------------DY------------ 132
            Y  G Y+ A     E I   P+                       DY            
Sbjct: 460 YYEIGDYKSAIQDYSESIRLNPKDSKTYINRGIARGALEDQVGAISDYTQAIKLNPNDVK 519

Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN---------SPYVKGAR---- 179
            YY  G S  +M+          +  ++  ++ +E   +         S Y+        
Sbjct: 520 AYYYRGKSLFKMLD--------YQGAIENYNQFLEVKPDDADAYTNRCSAYLHKGNDSSA 571

Query: 180 ----FYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV--LANYSDAEHAEEAMA 231
                       ++ LA   + I   Y   GEY  A     +   +   +   +   A+A
Sbjct: 572 IADCQQAIEINPQDFLAYHNLCIA--YFNLGEYQRATENCSIAIGIDKNNAKAYTNRALA 629

Query: 232 RLVEAYVALALMD 244
           +    Y+  A+ D
Sbjct: 630 QSARGYLQEAIKD 642



 Score = 40.9 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 51/168 (30%), Gaps = 39/168 (23%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           + +Y+K     K+     A   + +  +  P     +K+ +      Y  G    +    
Sbjct: 349 QTLYKKGQELAKQGKQQAAIANYTEALKLNP-----KKASI-----YYKRGNSYYSHRSY 398

Query: 118 EEYITQYPES----KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
           E+ I  Y        N +  YY   + Y ++              +  +++ +    N  
Sbjct: 399 EKAIKDYTAGIKIKANYEDAYYQRALVYYELDNK--------DKAMTDLTQTLRINPN-- 448

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
           Y +  +                 G  Y + G+Y +AI  +   +    
Sbjct: 449 YTQAYKKR---------------GLIYYEIGDYKSAIQDYSESIRLNP 481


>gi|37523706|ref|NP_927083.1| hypothetical protein gll4137 [Gloeobacter violaceus PCC 7421]
 gi|35214711|dbj|BAC92078.1| gll4137 [Gloeobacter violaceus PCC 7421]
          Length = 379

 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 68/206 (33%), Gaps = 43/206 (20%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
             ++ + +A       +++ A   +N+  R +P      ++L   A  +      Q A +
Sbjct: 46  EAQQRFNEAGAKADRGDYAGAIADYNEAIRLYP--QY-YQALGKRADTRLKIEDLQGAVA 102

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS-PY 174
             +  +  YP       VY+ +  +Y ++                      + Y ++  Y
Sbjct: 103 DYKAMLRVYPNDIG---VYHNLAKAYFKL----------------------KNYPDTVIY 137

Query: 175 VKGARFY---VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
              A      +   R   A       R  +++GE+  A+  +  +L N  +       +A
Sbjct: 138 TGEALNRNPGMIDVRQLRA-------RALVRQGEFARAVADYNEILQNQPEEAAV---LA 187

Query: 232 RLVEAYVALALMDEA-REVVSLIQER 256
               AY  L     A  +  + +Q  
Sbjct: 188 DRARAYQRLGDYPRAFDDFNAALQLN 213


>gi|119384566|ref|YP_915622.1| TPR repeat-containing protein [Paracoccus denitrificans PD1222]
 gi|119374333|gb|ABL69926.1| TPR repeat-containing protein [Paracoccus denitrificans PD1222]
          Length = 245

 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 46/159 (28%), Gaps = 14/159 (8%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            +F  +A      W R  +  + + S +       +Y++    L   +   A  +    +
Sbjct: 93  LLFAELAQPGGETWARAETDILRIWSRSGSAAMDLLYKRGEAALDAGDTVTALGHLTALT 152

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
              P    A    L S    Y  G    A +   E +               +G    ++
Sbjct: 153 DHAP--DFAAGWYLRSV-AFYLDGDLGPAIADLGEVLRLELRHFG---ALTQLGTMLEEL 206

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
             D        +  L+   + ++ + +    + A   + 
Sbjct: 207 GDD--------RNALEAFRQSLKIHPHQQEAQDAVRRLE 237


>gi|329930344|ref|ZP_08283933.1| tetratricopeptide repeat protein [Paenibacillus sp. HGF5]
 gi|328935070|gb|EGG31556.1| tetratricopeptide repeat protein [Paenibacillus sp. HGF5]
          Length = 560

 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 73/203 (35%), Gaps = 29/203 (14%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           +++AV  L    + KA +YF +     P   V        A +    G Y+ +  +    
Sbjct: 7   FDRAVRSLDRYQYDKALKYFRKAVEYEPDNPVNH---CNMAGILSETGDYKASNDVLAHI 63

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           + Q      +   Y+ +  +YA M           +   + +   +E   N  ++  A  
Sbjct: 64  LEQ--VDPLMTECYFYMANNYANM--------EQFEKAEEALVTYLEEDPNGQFLDEAEE 113

Query: 181 YVTVGR---------NQLAAKEVEI----GRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            + +           N++ ++E  +     R  L+ G++  A+   + ++ +  D   A 
Sbjct: 114 MMELLHYELNRPAKLNRIKSREGVVEHEHARALLEEGKFAQAVKLLEEIVKDNPDFLAAR 173

Query: 228 EAMARLVEAYVALALMDEAREVV 250
             +A    AY  +   D A+  +
Sbjct: 174 NNLAL---AYYYMGRFDTAKRTI 193


>gi|325860313|ref|ZP_08173435.1| tetratricopeptide repeat protein [Prevotella denticola CRIS 18C-A]
 gi|325482192|gb|EGC85203.1| tetratricopeptide repeat protein [Prevotella denticola CRIS 18C-A]
          Length = 851

 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 7/65 (10%), Positives = 20/65 (30%), Gaps = 8/65 (12%)

Query: 68  LKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEEYITQYP 125
            ++ N+++A + + +  +          + L        Y       A    E      P
Sbjct: 633 YQKGNYAQAVKGYEKLLKQ------GESAALYYNLGNSYYRLDNIPHAVLSYERAQRLAP 686

Query: 126 ESKNV 130
             +++
Sbjct: 687 GDEDI 691


>gi|319650526|ref|ZP_08004666.1| YvcD protein [Bacillus sp. 2_A_57_CT2]
 gi|317397707|gb|EFV78405.1| YvcD protein [Bacillus sp. 2_A_57_CT2]
          Length = 499

 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 24/120 (20%)

Query: 57  QREVYEK---------AVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQY 105
             E+YE+         A   L+  +F KA E  N    ++P  ++          A   +
Sbjct: 144 DDELYEQDDLITKQEHARELLESGHFPKAVEILNSVIDEYPEYWSAYN-----NLALAYF 198

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
             G+ Q+AA + E+ + + P +        L  +    +      D R  +L+ + + +I
Sbjct: 199 YLGEVQKAADILEKVLEENPGN--------LHALCNKLVFAFYERDFRQVRLLKEALKKI 250


>gi|262172999|ref|ZP_06040676.1| TPR domain protein in aerotolerance operon [Vibrio mimicus MB-451]
 gi|261890357|gb|EEY36344.1| TPR domain protein in aerotolerance operon [Vibrio mimicus MB-451]
          Length = 636

 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 40/128 (31%), Gaps = 17/128 (13%)

Query: 14  AWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL----- 68
           A  +   + AL     +    L      +S  +  D      ++ + Y +A         
Sbjct: 312 AALFMFRRGALFTVVLLIGASLPNQHAWASPWLNQDQQAMRDFESKQYSQAAEEFSDPRW 371

Query: 69  ------KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
                    ++  A + F+Q     P       +    A     AG   +A SL E+ + 
Sbjct: 372 QGAARYNAGDYQGAIDAFSQVDN--P----DLDTQYNLANAYAQAGDLSKARSLYEQVLE 425

Query: 123 QYPESKNV 130
           + P  ++ 
Sbjct: 426 KEPNHQDA 433


>gi|189184574|ref|YP_001938359.1| TPR repeat-containing protein 08 [Orientia tsutsugamushi str.
           Ikeda]
 gi|189181345|dbj|BAG41125.1| TPR repeat-containing protein 08 [Orientia tsutsugamushi str.
           Ikeda]
          Length = 357

 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 73/214 (34%), Gaps = 35/214 (16%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
              Y K +   +   + +A + ++   +   +     K+ +         G+YQ+A    
Sbjct: 174 NAYYNKGIALNELGRYQEAIDNYDIAIK---YKPDLAKAYINKGNALNELGRYQEAIENF 230

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           +  I   P  +     YY  G+S  Q+++         +  ++     ++   +      
Sbjct: 231 DTGIRYNPNDEK---AYYNKGISLYQLVQ--------YQEAIENCDIAIKHKPD------ 273

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
                      LA   +  G    K G++  AI +F L +          EA     E+ 
Sbjct: 274 -----------LAEAYMNKGVALSKLGQHQEAIKKFNLAIKYKPG---FAEAYLNKGESL 319

Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
             L   ++A +    +  +Y  G  A Y+  ++K
Sbjct: 320 KQLGQREKAIKNFE-LAIKYKPGLIAPYIRDILK 352



 Score = 35.5 bits (81), Expect = 7.8,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 57/170 (33%), Gaps = 31/170 (18%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            + + K   F + + + +A + FN   +  P++    ++ +         G++Q+A    
Sbjct: 4   DKYFNKGNSFFQLRKYQEAIKKFNLAIKCNPYSA---EAYINKGIALDKLGQHQEAIENY 60

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           +  I   P+S      Y   G+S  Q+           +  ++     ++   +S     
Sbjct: 61  DIAIKYKPDSVE---AYINKGISLKQL--------GQYQDAIKNYDIAIKYKPDSAEA-- 107

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
                       A  E+         G+Y  AI  + + +    D+  A 
Sbjct: 108 ------YINKGAALNEL---------GQYQEAIENYDIAIKYKPDSAEAY 142


>gi|118087005|ref|XP_419224.2| PREDICTED: similar to aspartyl(asparaginyl)beta-hydroxylase; HAAH
           [Gallus gallus]
          Length = 885

 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 39/127 (30%), Gaps = 19/127 (14%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-------------FAGVARKSLLM 99
           D   + E+ + A    K+    +A   +      +P             F     K+ L 
Sbjct: 416 DKTIKAEL-DAAEKLRKKGKVEEALRAYEALVNQYPEIKKKKKPKLLNKF-DKTIKAELD 473

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
           +A      GK ++A    E  + QYPES       Y    S   +   +       +  +
Sbjct: 474 AAEKLRKKGKVEEALRAFEALVNQYPESPR---ARYGKAQSEDDLAEKM-RSNEMLQKAI 529

Query: 160 QYMSRIV 166
                +V
Sbjct: 530 NTYDEVV 536


>gi|255536648|ref|YP_003097019.1| conserved hypothetical protein, TPR domain protein
           [Flavobacteriaceae bacterium 3519-10]
 gi|255342844|gb|ACU08957.1| conserved hypothetical protein, TPR domain protein
           [Flavobacteriaceae bacterium 3519-10]
          Length = 456

 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 44/114 (38%), Gaps = 20/114 (17%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAFVQYSAGKYQQAASLGE 118
           YE    +   +N+ +A   F+      P +    A K+  + A      G++ +A ++ E
Sbjct: 201 YEYGQFYFNRKNYEEAIRGFDYLLAINPQSVGVYANKAACLEA-----MGEWLKAIAVYE 255

Query: 119 EYITQ-YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           E +   Y +S    + YY +G+ Y +  +          L LQ   + +     
Sbjct: 256 EMLELEYTKS----FTYYKIGLCYKENKQQT--------LALQAFQKSLRDDPQ 297


>gi|190575665|ref|YP_001973510.1| putative transmembrane TPR repeat-containing protein
           [Stenotrophomonas maltophilia K279a]
 gi|190013587|emb|CAQ47222.1| putative transmembrane TPR repeat protein [Stenotrophomonas
           maltophilia K279a]
          Length = 614

 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 10/65 (15%), Positives = 19/65 (29%), Gaps = 8/65 (12%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
              V   +  +F+ A + F     D              A      G Y +A +  +  +
Sbjct: 372 ADGVQAYRAGDFATARKQFEGIDSDA--GWY------NLANTLARQGSYDEAIAAYDRAL 423

Query: 122 TQYPE 126
             +P 
Sbjct: 424 ALHPG 428


>gi|188994389|ref|YP_001928641.1| probable aerotolerance-related exported protein BatE [Porphyromonas
           gingivalis ATCC 33277]
 gi|188594069|dbj|BAG33044.1| probable aerotolerance-related exported protein BatE [Porphyromonas
           gingivalis ATCC 33277]
          Length = 302

 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 44/155 (28%), Gaps = 25/155 (16%)

Query: 16  AYQLYKFALTIFFSIAVCFL-----------------VGWERQSSRDVYLDSVTDVRYQR 58
              +    L +F SI                      V     ++ +V  +S  D     
Sbjct: 6   LRHIAVLPLILFLSIGSLLSLQAQNQDTSIRRSVFLPVDSSSIATSEVETESAADSSATG 65

Query: 59  EV--YEKAVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           ++   E+       + + +A   + +       P A +    L       Y +G+   + 
Sbjct: 66  KILSAEEIRRLFDAKQYGRAATAYERILRETAQPDASL----LYNLGCCYYKSGEVALSI 121

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
            + E      P  K++     + G+     I D  
Sbjct: 122 LMFERAYRLAPNDKDIRVNLEMAGLKAFDKISDSE 156


>gi|27380929|ref|NP_772458.1| hypothetical protein bll5818 [Bradyrhizobium japonicum USDA 110]
 gi|27354095|dbj|BAC51083.1| bll5818 [Bradyrhizobium japonicum USDA 110]
          Length = 307

 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 32/112 (28%), Gaps = 14/112 (12%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            +   +  + ++ KA   F+Q     P    A K+           G+Y+ A    ++ I
Sbjct: 97  NRGNAYTAKGDYDKAIRDFDQSIALKPT--YA-KAFNNRGVAYLRKGEYELAIEAFDDAI 153

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
              P     DYV      +           +   +         +    +S 
Sbjct: 154 KLDP-----DYV------AAFVNRAGAYLKKNDHQRAAHDYDEAIRLQPDSQ 194



 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 32/87 (36%), Gaps = 3/87 (3%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           RD          Y +    + V +L++  +  A E F+   +  P       + +  A  
Sbjct: 113 RDFDQSIALKPTYAKAFNNRGVAYLRKGEYELAIEAFDDAIKLDP--DYVA-AFVNRAGA 169

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNV 130
                 +Q+AA   +E I   P+S+  
Sbjct: 170 YLKKNDHQRAAHDYDEAIRLQPDSQAA 196


>gi|186685791|ref|YP_001868987.1| hypothetical protein Npun_F5744 [Nostoc punctiforme PCC 73102]
 gi|186468243|gb|ACC84044.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102]
          Length = 280

 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 18/172 (10%), Positives = 47/172 (27%), Gaps = 33/172 (19%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQR-------EVYEKAVLFLKEQNFS 74
           F + IF ++     V   +  S  V    V+    +        E Y +        +  
Sbjct: 17  FTIAIFTTLTAISSVSCSKNDSVLVTEIGVSTPSRRSATASRGGEFYLQGKNQHLNGDLQ 76

Query: 75  KAYEYFNQCSRDFPFAGVARKSLLMSAF-----VQYSAGKYQQAASLGEEYITQYPESKN 129
            A   +++         +++ S   +A+       +  G  ++A +   + +   P    
Sbjct: 77  AAIASYSK--------AISQNSQYGAAYNGRGLAYFDLGDKEKAIADYNQALRINPNDAE 128

Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                          + +        +  ++  S  +    N  Y +     
Sbjct: 129 A-----------YNNLGNARASLEGNREAVKDYSEAIRLNPN--YAEAYNNR 167


>gi|327313512|ref|YP_004328949.1| hypothetical protein HMPREF9137_1254 [Prevotella denticola F0289]
 gi|326946194|gb|AEA22079.1| tetratricopeptide repeat protein [Prevotella denticola F0289]
          Length = 851

 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 7/65 (10%), Positives = 20/65 (30%), Gaps = 8/65 (12%)

Query: 68  LKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEEYITQYP 125
            ++ N+++A + + +  +          + L        Y       A    E      P
Sbjct: 633 YQKGNYAQAVKGYEKLLKQ------GESAALYYNLGNSYYRLDNIPHAVLSYERAQRLAP 686

Query: 126 ESKNV 130
             +++
Sbjct: 687 GDEDI 691


>gi|303239588|ref|ZP_07326113.1| Tetratricopeptide TPR_2 repeat protein [Acetivibrio cellulolyticus
           CD2]
 gi|302592759|gb|EFL62482.1| Tetratricopeptide TPR_2 repeat protein [Acetivibrio cellulolyticus
           CD2]
          Length = 375

 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 23/182 (12%), Positives = 61/182 (33%), Gaps = 47/182 (25%)

Query: 5   LGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKA 64
           L + + I +    Q Y  A  +  ++    L G   + ++   L      +  +E++ + 
Sbjct: 240 LTKLLEIDKLVLEQNYVAAADMLAALNAAELKG--IEKAKYDSLRGQAMEKAAKEIFTQG 297

Query: 65  VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
               K++ F +A E F++                   +V    G+++ + +         
Sbjct: 298 RELYKKKQFKEALEKFDKV----------------VLYV----GEWKNSNATT------- 330

Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
                     Y  G+ Y ++      D       L+    ++ +Y +S + + ++  +  
Sbjct: 331 ----------YYRGVCYLELNN---RD-----KALEAFKEVISKYPSSSFARYSQSRMNE 372

Query: 185 GR 186
             
Sbjct: 373 MN 374


>gi|256082559|ref|XP_002577522.1| heat shock protein 70 [Schistosoma mansoni]
 gi|238662844|emb|CAZ33760.1| heat shock protein 70 (hsp70)-interacting protein, putative
           [Schistosoma mansoni]
          Length = 271

 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 18/137 (13%), Positives = 46/137 (33%), Gaps = 25/137 (18%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           +A+  + + + + A + F +  +  P +    AR++            K   A +  ++ 
Sbjct: 22  EAMAKMSDGDLTGAVDLFTEAIKLNPQSSLFHARRAS-----CFVRMKKPSHAIADCDKA 76

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           I+  P+S    Y +   G +  +MI          +   Q +   ++      Y   A  
Sbjct: 77  ISLNPDSAQ-PYKW--RGFAN-KMI-------GNWEAAYQDLQTSLKL----DYTDDANE 121

Query: 181 YVTVG---RNQLAAKEV 194
            +        ++    +
Sbjct: 122 AIKEIEPKHKRIFEHNM 138


>gi|45656305|ref|YP_000391.1| hypothetical protein LIC10405 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45599539|gb|AAS69028.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 688

 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 31/84 (36%), Gaps = 3/84 (3%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
             +++ A  +  + +   A E + +     P       +L+    V     +Y +A +  
Sbjct: 379 DSLFQLAEAYYNKGDLLSAEETYRRIVSSTPGDSFTETALINLGVVLDQMERYGEAVTTL 438

Query: 118 EEYITQYPESKNVDYVYYLVGMSY 141
              I   P++      Y+ +G+ Y
Sbjct: 439 NRVIELNPKNAK---AYHTLGIVY 459



 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 69/212 (32%), Gaps = 18/212 (8%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y   V + K+    +A E F +     P   +A  S      + Y+   Y+ A     + 
Sbjct: 243 YNLGVSYFKKGEIPQAEEEFKKVVIKTPSGRLAALSHSYLGNIAYNKQDYKNAEYHFRQA 302

Query: 121 ITQYPESKNVDYVYYLV-----------GMSYAQMIRDVP-YDQRATKLMLQYMSRIVER 168
               P      Y+Y L             + Y ++ RD    D    +L+ +  S + + 
Sbjct: 303 SNLSPN--EAKYLYNLAIVLQKNGNKEEALKYLELARDAGANDPEIYRLIAEGFSNLNQ- 359

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
                    A                ++   Y  +G+ ++A   ++ ++++       E 
Sbjct: 360 ---GEMSISALQKSLKYNPTDVDSLFQLAEAYYNKGDLLSAEETYRRIVSSTPGDSFTET 416

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           A+  L      +    EA   ++ + E  P+ 
Sbjct: 417 ALINLGVVLDQMERYGEAVTTLNRVIELNPKN 448


>gi|24213165|ref|NP_710646.1| TPR-repeat-containing protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|24193878|gb|AAN47664.1| TPR-repeat-containing protein [Leptospira interrogans serovar Lai
           str. 56601]
          Length = 688

 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 31/84 (36%), Gaps = 3/84 (3%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
             +++ A  +  + +   A E + +     P       +L+    V     +Y +A +  
Sbjct: 379 DSLFQLAEAYYNKGDLLSAEETYRRIVSSTPGDSFTETALINLGVVLDQMERYGEAVTTL 438

Query: 118 EEYITQYPESKNVDYVYYLVGMSY 141
              I   P++      Y+ +G+ Y
Sbjct: 439 NRVIELNPKNAK---AYHTLGIVY 459



 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 69/212 (32%), Gaps = 18/212 (8%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y   V + K+    +A E F +     P   +A  S      + Y+   Y+ A     + 
Sbjct: 243 YNLGVSYFKKGEIPQAEEEFKKVVIKTPSGRLAALSHSYLGNIAYNKQDYKNAEYHFRQA 302

Query: 121 ITQYPESKNVDYVYYLV-----------GMSYAQMIRDVP-YDQRATKLMLQYMSRIVER 168
               P      Y+Y L             + Y ++ RD    D    +L+ +  S + + 
Sbjct: 303 SNLSPN--EAKYLYNLAIVLQKNGNKEEALKYLELARDAGANDPEIYRLIAEGFSNLNQ- 359

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
                    A                ++   Y  +G+ ++A   ++ ++++       E 
Sbjct: 360 ---GEMSISALQKSLKYNPTDVDSLFQLAEAYYNKGDLLSAEETYRRIVSSTPGDSFTET 416

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           A+  L      +    EA   ++ + E  P+ 
Sbjct: 417 ALINLGVVLDQMERYGEAVTTLNRVIELNPKN 448


>gi|327404478|ref|YP_004345316.1| hypothetical protein Fluta_2493 [Fluviicola taffensis DSM 16823]
 gi|327319986|gb|AEA44478.1| hypothetical protein Fluta_2493 [Fluviicola taffensis DSM 16823]
          Length = 348

 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 51/145 (35%), Gaps = 31/145 (21%)

Query: 129 NVDYVYYL-VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           N+ Y+ YL   ++Y              K  L   + I++ Y +                
Sbjct: 230 NIPYMDYLDKSLNYTNR--------GKWKQALSRFNEIIKTYPD-----DVNAR------ 270

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA-NYSDAEHAEEAMARLVEAYVALALMDEA 246
                       Y   G+Y  A   F   L   +  +   +EA   L E+ +A      A
Sbjct: 271 ------FYAAWCYYNLGQYNDACVNFSACLQLEF--SNFNDEAEWYLAESRLANGDKHSA 322

Query: 247 REVVSLIQERYPQGYWARYVETLVK 271
           RE+ S I+ +  +GY+++  E  +K
Sbjct: 323 RELFSKIKNQ--KGYYSKQAEKRLK 345


>gi|262393796|ref|YP_003285650.1| putative heat shock protein [Vibrio sp. Ex25]
 gi|262337390|gb|ACY51185.1| putative heat shock protein [Vibrio sp. Ex25]
          Length = 373

 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 24/184 (13%), Positives = 56/184 (30%), Gaps = 30/184 (16%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A  ++      +A + F Q   +  +   A +  L++ +      ++++A     +    
Sbjct: 96  AKDYMVSGFLDRAEKIFEQLVEEPDYKEAALQ-QLVTIY--QQTREWEKAIYYANQLAKL 152

Query: 124 YPESKNVDYVYYLVG-MSYA-QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              +K       +   +++    I  +      T   +Q+  + +           A   
Sbjct: 153 --GNKRSR----MRANIAHFWCEIAMLDQADGNTNKAIQHFKKALAEDPKCVRASIALGR 206

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
           +                 YL+  +Y   I     VL    D +   + +  + E Y  L 
Sbjct: 207 I-----------------YLESEDYKHTIKYLTGVLE--QDKDFISDVLPTIAECYHHLG 247

Query: 242 LMDE 245
             DE
Sbjct: 248 QEDE 251


>gi|255629414|gb|ACU15053.1| unknown [Glycine max]
          Length = 231

 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 6/82 (7%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF---PFAGVARKS 96
             + R+        V    E+ EK      + +FS A +YF++    +    F+  AR  
Sbjct: 82  SAAEREASALVSERVSQAVELLEKGRELQTQGDFSGALDYFSKVIESYKDLAFSEYAR-- 139

Query: 97  LLMSAFVQYSAGKYQQAASLGE 118
            +  A   Y  G  ++A +  E
Sbjct: 140 -VGRALALYEVGDREEAIAEME 160


>gi|213580480|ref|ZP_03362306.1| outer membrane protein assembly complex subunit YfiO [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-0664]
          Length = 40

 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 16/40 (40%)

Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            D +   +A+  +  AY  + L  +A +V  +I       
Sbjct: 1   PDTQATRDALPLMENAYRQMQLNAQADKVAKIIAANSKNT 40


>gi|158521641|ref|YP_001529511.1| peptidase M48 Ste24p [Desulfococcus oleovorans Hxd3]
 gi|158510467|gb|ABW67434.1| peptidase M48 Ste24p [Desulfococcus oleovorans Hxd3]
          Length = 474

 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 3/59 (5%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y   +  L+    + A  +  + +   PF      +L       Y  G Y++A S+ E 
Sbjct: 301 YGLGLALLQNNRPADAIAHLEKVAEKSPFHPH---ALTDLGKAHYFTGAYEKALSILER 356


>gi|95929453|ref|ZP_01312196.1| Tetratricopeptide TPR_2 [Desulfuromonas acetoxidans DSM 684]
 gi|95134569|gb|EAT16225.1| Tetratricopeptide TPR_2 [Desulfuromonas acetoxidans DSM 684]
          Length = 251

 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 38/239 (15%), Positives = 73/239 (30%), Gaps = 54/239 (22%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +  +     +A+           +D       +VR   ++      +L  + +SKA  
Sbjct: 1   MMRLIVWSVLMVALVVGGCGPTTKPKD-------EVRAHHKM---GQSYLARKEYSKALN 50

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD---YVYY 135
                 +  P    A ++    A   Y    Y+ +    +E +   P++ NV+      Y
Sbjct: 51  ELLTAEKLAP-DDAAIQA--NLAEAYYGKRAYELSEQHFKESLLLDPDNPNVENNLAALY 107

Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER--YTNSPYVKGARFYVTVGRNQ-LAAK 192
           L              D +          ++ +   +          F V       LA  
Sbjct: 108 L--------------DMQRWDDAAHLFRKVSDNLLFP---------FRVRSLTGLGLA-- 142

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
                  Y + G Y+ AI  F   L +   +      MA   + Y+ +A  D AR  + 
Sbjct: 143 -------YQRGGNYIKAILAFNEALESAPGSTGI---MALQAQTYMRMAKYDLARTQLK 191


>gi|195391804|ref|XP_002054550.1| GJ22746 [Drosophila virilis]
 gi|194152636|gb|EDW68070.1| GJ22746 [Drosophila virilis]
          Length = 515

 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 41/137 (29%), Gaps = 25/137 (18%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKY 110
           D     +   K    LK + FSKA + +++    +P +    A ++L            +
Sbjct: 40  DFAAAEQYKNKGNDLLKTKEFSKAIDMYSKAIELYPNSAIYYANRAL-----AHLRQESF 94

Query: 111 QQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
             A   G   +   P      Y+  YY    ++  +           K  L     + + 
Sbjct: 95  GLALQDGVSAVKTDPS-----YLKGYYRRAAAHMSL--------GKFKQALSDFEYVAKC 141

Query: 169 YTNSPYVKGARFYVTVG 185
             N      A+   T  
Sbjct: 142 RPNDK---DAKLKFTEC 155


>gi|119593818|gb|EAW73412.1| hypothetical protein FLJ20699, isoform CRA_a [Homo sapiens]
 gi|119593821|gb|EAW73415.1| hypothetical protein FLJ20699, isoform CRA_a [Homo sapiens]
          Length = 453

 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 45/150 (30%), Gaps = 29/150 (19%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQ----------REVYEKAVLFLKEQNFSKAYE 78
                 L+G       D  LD       +           +++  AV      NF KA E
Sbjct: 70  MATGLVLIGTGSSVKLDKELDLAVKTMVEISRTQPLTRREQLHVSAVETFANGNFPKACE 129

Query: 79  YFNQCSRDFPFAGVARKSLLMSA-----FVQYSAGKYQQAASLGEEYITQYPE-SKNVDY 132
            + Q  +D P          M A        +  G  +Q           YP  + ++  
Sbjct: 130 LWEQILQDHPTD--------MLALKFSHDAYFYLGYQEQMRDSVAR---IYPFWTPDIPL 178

Query: 133 VYYLVGMSYAQMIRDVPYDQ--RATKLMLQ 160
             Y+ G+    ++    YDQ  +  K  L 
Sbjct: 179 SSYVKGIYSFGLMETNFYDQAEKLAKEALS 208


>gi|91203185|emb|CAJ72824.1| hypothetical protein kustd2079 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 319

 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 76/227 (33%), Gaps = 62/227 (27%)

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY- 132
           S+A E F +  +  P      ++      V +   +Y+ A    ++ I   P     DY 
Sbjct: 96  SEAIELFQKVLKINPNQP---QAYFKIGTVYFDMEEYEPAIEYLKKTIEMNP-----DYK 147

Query: 133 -VYYLVGMSYAQ----------MIRDVPYDQRAT----------------KLMLQYMSRI 165
             Y L+G+SYA+          + + +  D                    K  L   ++ 
Sbjct: 148 VAYSLLGISYAKSGKYDEAVKVLKKRIELDPNLAITYSNLGLVYTMKGSNKEALVEYNKA 207

Query: 166 VERYTNSPYVKGARFYVTVGRNQL--------------------AAKEVEIGRYYLKRGE 205
           +     +PY +   F +      +                    A  +  +G  YLK+ +
Sbjct: 208 LGI---NPYHEETLFNIAFLYENMGQIDEALAYYNKTVECNSGNAKAQYNLGLNYLKKKQ 264

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           Y  AI  F++ L    D     EA   L   Y A  + ++A+   SL
Sbjct: 265 YDEAINAFEISLMANPD---NIEAYNNLGNVYAAKGMEEKAKNYFSL 308


>gi|53728749|ref|ZP_00135485.2| COG2956: Predicted N-acetylglucosaminyl transferase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126208217|ref|YP_001053442.1| tetratricopeptide repeat protein [Actinobacillus pleuropneumoniae
           L20]
 gi|126097009|gb|ABN73837.1| hypothetical protein APL_0737 [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
          Length = 398

 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 82/212 (38%), Gaps = 34/212 (16%)

Query: 48  LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           LD+  D   ++++  K   A  F+    + +A  Y+     +      A  SL     V 
Sbjct: 103 LDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDE---PEFAVNSLTQLMTVY 159

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
               ++++A ++ E+ I   P++  +   +Y     YAQ I++   D       L  +S+
Sbjct: 160 QKTKEWKKAINVAEKLIKIEPDTDKIPLSHYY--CEYAQAIKNEDLDGH-----LSALSK 212

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
            +E                      A   + +G YYL + ++ +A+  ++ +L    D  
Sbjct: 213 ALEYSPQC-----------------ARASILLGDYYLAQNQFQSALKNYERILQQDPD-- 253

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQER 256
              E + ++   Y  +A  D A   + LI+  
Sbjct: 254 FISEVIEKIKACY--MAENDLANYELFLIRAN 283


>gi|31242247|ref|XP_321554.1| AGAP001559-PA [Anopheles gambiae str. PEST]
 gi|19572379|emb|CAD27925.1| putative TPR-containing phosphoprotein [Anopheles gambiae]
 gi|21288614|gb|EAA00907.1| AGAP001559-PA [Anopheles gambiae str. PEST]
          Length = 1200

 Score = 41.3 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 49/141 (34%), Gaps = 24/141 (17%)

Query: 133 VYYLVGMSYA--QMIRDVPYDQRATKL----MLQYMSRIVERYTNSPYVKGA-------R 179
            Y L+ +     Q +     D+   K      L    +++     + +           +
Sbjct: 600 AYSLIALGNFWLQSLHQPNRDKEKEKKHQEKALAIYKQVLRNDPKNIWAANGIGAVLAHK 659

Query: 180 FYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
             +   R+  A  +E         + I   Y+++ +Y++AI  ++  L  +    +  E 
Sbjct: 660 GCIIEARDIFAQVREATADFCDVWINIAHIYVEQKQYISAIQMYENCLKKFYRHNNV-EV 718

Query: 230 MARLVEAYVALALMDEAREVV 250
           M  L  AY     + EA+  +
Sbjct: 719 MQYLARAYFRAGKLKEAKMTL 739


>gi|302343834|ref|YP_003808363.1| peptidase M48 Ste24p [Desulfarculus baarsii DSM 2075]
 gi|301640447|gb|ADK85769.1| peptidase M48 Ste24p [Desulfarculus baarsii DSM 2075]
          Length = 503

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 18/121 (14%), Positives = 50/121 (41%), Gaps = 14/121 (11%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
               +Y +A+L ++++++ +A    ++  R +P     + +L          G+  +A S
Sbjct: 292 SPLPLYGQALLSMRKRDYDQALRILDEMERKWPGD---QDALKERGLCLVRVGRLDEAKS 348

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
           + +  +T+ P +  +    + +G +YA   +D         +      R+V+    +   
Sbjct: 349 VLDAALTKDPGNPQI---LFAIGEAYAHSGQD--------DVAASAFRRVVQAQPENLEA 397

Query: 176 K 176
           +
Sbjct: 398 R 398


>gi|225619509|ref|YP_002720766.1| lytic transglycosylase [Brachyspira hyodysenteriae WA1]
 gi|225214328|gb|ACN83062.1| Lytic transglycosylase catalytic [Brachyspira hyodysenteriae WA1]
          Length = 723

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 42/120 (35%), Gaps = 8/120 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A +  K  +   A   F++   +       R  L  SA        Y+++  L   +
Sbjct: 210 YYMARIKQKSGDRRDAAALFDEYLSNLNNKSHRRLGLYYSADNYNRLKNYEKSIELYNTF 269

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           + +YP    V  +Y             +  ++        Y++ +++R+  S Y + A  
Sbjct: 270 LKEYPRDDYVPRIY--------NSFVTLSLNRNNLVQAKTYLTNVMKRFPKSRYTELALK 321


>gi|193084332|gb|ACF09989.1| TPR-repeat protein/GTP cyclohydrolase III [uncultured marine
           crenarchaeote SAT1000-49-D2]
          Length = 272

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 54/146 (36%), Gaps = 18/146 (12%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
            +  + +  +Y +A+ F++++    A   F +  +  P       +L           KY
Sbjct: 5   ASKEKTEDLLY-QAMSFMEKRQPKSAIPLFKKIVKQDP---KNTDALYNQGLALNQLRKY 60

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           Q A +  ++ +   P  K +       G++ A+        Q  T   L+Y ++ +E   
Sbjct: 61  QDAITCFDKVLEINP--KYIA-AINNRGIALAE--------QGNTSDALEYYNKAIEIDP 109

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEI 196
              Y   A +   V  ++L   E  I
Sbjct: 110 --KYAA-AHYNKGVLYDKLLQHEEAI 132


>gi|220922402|ref|YP_002497704.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
           nodulans ORS 2060]
 gi|219947009|gb|ACL57401.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
           nodulans ORS 2060]
          Length = 818

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 22/164 (13%), Positives = 48/164 (29%), Gaps = 35/164 (21%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAA 114
             + Y +   F  +  + +A   ++Q  R  P +      + L       Y  G+Y +A 
Sbjct: 26  ATDYYNRGDAFRSKGEYDRAIADYDQALRLDPKSAVAYTHRGL-----AFYRKGEYDRAI 80

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
           +  ++ +            Y   G+++ +               +    + +       Y
Sbjct: 81  ADYDQALRL---DPKSAVAYTHRGLAFYRK--------GEYDRAIADYDQALRLDP--KY 127

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
                         LA         + ++GEY  AI  +   L 
Sbjct: 128 AN------IYINRGLA---------FYRKGEYDRAIADYDQALR 156


>gi|307245597|ref|ZP_07527683.1| hypothetical protein appser1_8000 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307259007|ref|ZP_07540738.1| hypothetical protein appser11_8060 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306853299|gb|EFM85518.1| hypothetical protein appser1_8000 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306867031|gb|EFM98888.1| hypothetical protein appser11_8060 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
          Length = 391

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 82/212 (38%), Gaps = 34/212 (16%)

Query: 48  LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           LD+  D   ++++  K   A  F+    + +A  Y+     +      A  SL     V 
Sbjct: 96  LDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDE---PEFAVNSLTQLMTVY 152

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
               ++++A ++ E+ I   P++  +   +Y     YAQ I++   D       L  +S+
Sbjct: 153 QKTKEWKKAINVAEKLIKIEPDTDKIPLSHYY--CEYAQAIKNEDLDGH-----LSALSK 205

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
            +E                      A   + +G YYL + ++ +A+  ++ +L    D  
Sbjct: 206 TLEYSPQC-----------------ARASILLGDYYLAQNQFQSALKNYEHILQQDPD-- 246

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQER 256
              E + ++   Y  +A  D A   + LI+  
Sbjct: 247 FISEVIEKIKACY--MAENDLANYELFLIRAN 276


>gi|295091438|emb|CBK77545.1| hypothetical protein [Clostridium cf. saccharolyticum K10]
          Length = 465

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 41/91 (45%), Gaps = 11/91 (12%)

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           ++L   A+  +SAG+   A +     +T  P++ N   V + +GM Y          ++ 
Sbjct: 356 QTLEDLAYTMWSAGRMDDALNYYNTCLTIRPDNPN---VLFNMGMIY--------RSKQD 404

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
               ++  +++  +Y +S Y + AR  +T  
Sbjct: 405 FAKAVELFTQVSTQYGDSEYAEKARNQLTEL 435


>gi|282900431|ref|ZP_06308381.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
 gi|281194744|gb|EFA69691.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
          Length = 207

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 36/90 (40%), Gaps = 8/90 (8%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM--SAFVQYSAGK 109
            D R  RE+ E+    +   ++S A   +   ++  P     + + +     ++    G 
Sbjct: 15  ADNRKLRELLEQGRKLVDSGDYSGAIAVYQDAAKLAP-----KNAKIYSGIGYLYAQQGN 69

Query: 110 YQQAASLGEEYITQYPESKNVDYVY-YLVG 138
           + Q+ S   + I+  P + +  Y   Y+ G
Sbjct: 70  FSQSLSAYRQAISINPNNSDFYYAVGYIKG 99


>gi|254414647|ref|ZP_05028412.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
 gi|196178495|gb|EDX73494.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
          Length = 234

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 52/157 (33%), Gaps = 51/157 (32%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
             G+Y  A +L  + I  +P    +DY     G+ Y QM +         +  L   +R 
Sbjct: 54  KQGEYSSAIALLSQAIKHHPTH-AIDY--NNRGLIYFQMGQR--------QKALDDYNRA 102

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           ++                         E++    Y  RG Y AA+ +    LA+Y     
Sbjct: 103 LQLNP----------------------ELDSA--YNNRGNYYAAMGQLAKALADY----- 133

Query: 226 AEEAMAR----------LVEAYVALALMDEAREVVSL 252
            E+A+                +  L L D A E + L
Sbjct: 134 -EKALDLNPRNVRTWINQAITFRELGLYDLAIENLDL 169



 Score = 35.5 bits (81), Expect = 8.8,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 58/192 (30%), Gaps = 29/192 (15%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAFV 103
                  D    + +   A    K+  +S A    +Q  +  P        + L+     
Sbjct: 31  TLTPRTPDHLSIKNLRTSAQRQAKQGEYSSAIALLSQAIKHHPTHAIDYNNRGLI----- 85

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG------------MSYAQMIRDV-PY 150
            +  G+ Q+A       +   P    +D  Y   G            ++  +   D+ P 
Sbjct: 86  YFQMGQRQKALDDYNRALQLNP---ELDSAYNNRGNYYAAMGQLAKALADYEKALDLNPR 142

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL-AAKEVEIGRYYLKRGEYVAA 209
           + R           +   Y  +         +   +N + A +    GR Y  RG++  A
Sbjct: 143 NVRTWINQAITFREL-GLYDLAIENLDLALILGCLQNHIYAER----GRTYHLRGDWNCA 197

Query: 210 IPRFQLVLANYS 221
           I  +Q  L+   
Sbjct: 198 IADYQRALSQLP 209


>gi|197285948|ref|YP_002151820.1| cellulose synthase protein [Proteus mirabilis HI4320]
 gi|194683435|emb|CAR44197.1| cellulose synthase protein [Proteus mirabilis HI4320]
          Length = 1091

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 74/219 (33%), Gaps = 44/219 (20%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +  KA   L  Q +S A  YF Q  +  P+     KS           G  + A    E+
Sbjct: 280 LLAKADEALLNQEYSTAKRYFTQVRQLSPY-----KSE-----AYIGLGDIELALHQLEQ 329

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYD------QRATKLMLQYMSRIVERYTNSP 173
                         YY   + Y        +       Q++ +   Q+M+ +  +     
Sbjct: 330 AER-----------YYQQALQYQPNDAATLHSLTKLYRQQSHQKAAQFMANLTSQ----Q 374

Query: 174 YVKGARFY---VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
           Y   A+ Y   ++  +  LAA +        ++  Y++AI + + +   Y D       +
Sbjct: 375 YKNLAQDYGYIISGIQQDLAADD-------EQQQHYLSAIEKRKAIAKAYPDEVWN---I 424

Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
            RL +  +       A +  + + +R P     RY   L
Sbjct: 425 YRLADDLLITQQPQLAEDYFNQLNQRRPNDPSRRYAYAL 463


>gi|196012190|ref|XP_002115958.1| hypothetical protein TRIADDRAFT_59913 [Trichoplax adhaerens]
 gi|190581734|gb|EDV21810.1| hypothetical protein TRIADDRAFT_59913 [Trichoplax adhaerens]
          Length = 1265

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 40/121 (33%), Gaps = 25/121 (20%)

Query: 61   YEK-AVLFLKEQNFSKAYEYFNQ--------CSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
            Y +    ++ + N  +A   + +           + P   +AR          +  GK++
Sbjct: 897  YSRIGTAYMNQGNCEQAISMYKKSLEVKLSVLDDNHP--DMARSYK-DLGNAYFKQGKHE 953

Query: 112  QAASLGEEYITQYP-----ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
            +A S+ E+ +  +         +V   Y  +G  Y          QR  +       + +
Sbjct: 954  KAISMYEKSLKIHKSTLGDNHTDVAQSYSEIGNIYYA--------QRKYEEAFSNYEKSL 1005

Query: 167  E 167
            +
Sbjct: 1006 K 1006


>gi|167749084|ref|ZP_02421211.1| hypothetical protein EUBSIR_00028 [Eubacterium siraeum DSM 15702]
 gi|167749749|ref|ZP_02421876.1| hypothetical protein EUBSIR_00716 [Eubacterium siraeum DSM 15702]
 gi|167657232|gb|EDS01362.1| hypothetical protein EUBSIR_00716 [Eubacterium siraeum DSM 15702]
 gi|167657942|gb|EDS02072.1| hypothetical protein EUBSIR_00028 [Eubacterium siraeum DSM 15702]
          Length = 1144

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 17/133 (12%), Positives = 38/133 (28%), Gaps = 34/133 (25%)

Query: 61  YEKAVLFLKEQ--NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG--KYQQAASL 116
           YE      ++    ++     +      +     A K+   + + QY +G  KY    + 
Sbjct: 476 YEDGKKQYEDGYSQYTSGLAQYESAKAQY----DAGKAQYDAGYAQYVSGKAKYDSGKAE 531

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            ++           +Y  Y  G+      +     + A     +                
Sbjct: 532 YDK-----------NYADYEKGLKEYNEGKKAL--ETAKTDADKQF-------------A 565

Query: 177 GARFYVTVGRNQL 189
            A+  +  GR +L
Sbjct: 566 DAQKKIDDGREKL 578


>gi|300312980|ref|YP_003777072.1| N-acetylglucosaminyl transferase [Herbaspirillum seropedicae SmR1]
 gi|300075765|gb|ADJ65164.1| N-acetylglucosaminyl transferase protein [Herbaspirillum
           seropedicae SmR1]
          Length = 391

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 4/70 (5%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             +    +   +YE    +LK     +A E FN+      ++  A ++LL          
Sbjct: 100 PDLPAEHHGHALYELGQDYLKAGLLDRAEESFNRLIDTQ-YSAQAGRALLEI---YQREK 155

Query: 109 KYQQAASLGE 118
           ++++A S  E
Sbjct: 156 EWERAISAAE 165


>gi|262404180|ref|ZP_06080735.1| TPR repeat-containing protein [Vibrio sp. RC586]
 gi|262349212|gb|EEY98350.1| TPR repeat-containing protein [Vibrio sp. RC586]
          Length = 257

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 55/146 (37%), Gaps = 16/146 (10%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
              S+ D    + +    ++  Y+ AV   LK+++++ A   F +   D+P +     S 
Sbjct: 121 PSSSNDDAAQGTFSSDANEQAAYQNAVDLILKKRDYAGAIAAFKKFQADYPNSTFTANSH 180

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPE---SKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
                + ++  + + A    + +I    +   +K  D       +     + D+      
Sbjct: 181 YWLGQLYFAKKEDKDA---AKSFIAVVSQQDSNKRAD------ALV---KLGDIAKRNNN 228

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARF 180
            +   ++  + ++ Y +S   K A+ 
Sbjct: 229 AEQARKFYQQAIDEYPDSASAKIAKE 254



 Score = 35.9 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 44/130 (33%), Gaps = 15/130 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            Q   D+   +R     +    +    Y NS +               A     +G+ Y 
Sbjct: 143 YQNAVDLILKKRDYAGAIAAFKKFQADYPNSTFT--------------ANSHYWLGQLYF 188

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + E   A   F  V++   D+    +A+ +L +        ++AR+      + YP   
Sbjct: 189 AKKEDKDAAKSFIAVVSQ-QDSNKRADALVKLGDIAKRNNNAEQARKFYQQAIDEYPDSA 247

Query: 262 WARYVETLVK 271
            A+  +  +K
Sbjct: 248 SAKIAKESLK 257


>gi|225871860|ref|YP_002753314.1| hypothetical protein ACP_0168 [Acidobacterium capsulatum ATCC
           51196]
 gi|225793685|gb|ACO33775.1| hypothetical protein ACP_0168 [Acidobacterium capsulatum ATCC
           51196]
          Length = 250

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 3/64 (4%)

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LAAK+ ++G +YL  G+YV A  RF+             EA+  L EA   L    EA +
Sbjct: 165 LAAKDNKVGSFYLASGDYVGAYSRFKEAT---QVDPKNAEAVFGLAEAADRLGKRTEAIQ 221

Query: 249 VVSL 252
              +
Sbjct: 222 NFEI 225


>gi|183238963|gb|ACC61051.1| tetratricopeptide repeat domain protein [uncultured bacterium]
          Length = 968

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 10/62 (16%), Positives = 22/62 (35%), Gaps = 4/62 (6%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A   +  + +  A + +    +  P   +A       A+  Y      +A + GE+ +  
Sbjct: 828 AESSMAGKQYKNAIKQYEAILKIDPANTIALN---NLAWAYYQEKD-ARALATGEQALRL 883

Query: 124 YP 125
            P
Sbjct: 884 NP 885


>gi|114591084|ref|XP_001160759.1| PREDICTED: leprecan-like 1 isoform 4 [Pan troglodytes]
          Length = 481

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 6/68 (8%)

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           F  Y  G+Y +A    + Y+  +P+ ++V     L  + Y + + D   D  A+    + 
Sbjct: 87  FAYYRVGEYVKALECAKAYLLCHPDDEDV-----LDNVDYYESLLDDSTDP-ASIEARED 140

Query: 162 MSRIVERY 169
           ++  V+R+
Sbjct: 141 LTMFVKRH 148


>gi|150395286|ref|YP_001325753.1| TonB-dependent receptor [Sinorhizobium medicae WSM419]
 gi|150026801|gb|ABR58918.1| TonB-dependent receptor [Sinorhizobium medicae WSM419]
          Length = 1198

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 29/93 (31%), Gaps = 3/93 (3%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
             ++ R++      D  +   +  +    ++  +  +A E     S   P    +  + L
Sbjct: 492 MAEAKREIDTALSVDPSFDVALVARGRYQMQNGDVDRAVEDLLAGSTANP--AYS-NAQL 548

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           + A   Y  G    AA   +      P    V 
Sbjct: 549 LLAAAHYEKGDRIPAAQALDNADRLDPNDPVVA 581


>gi|17232151|ref|NP_488699.1| hypothetical protein all4659 [Nostoc sp. PCC 7120]
 gi|17133796|dbj|BAB76358.1| all4659 [Nostoc sp. PCC 7120]
          Length = 236

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 31/95 (32%), Gaps = 31/95 (32%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFP--------------FAGVARKSL------------ 97
           A+   ++ N+S+A    NQ     P               +G  +K+L            
Sbjct: 48  ALRSAQQGNYSEAIALLNQLINRHPDNAVDYNNRGLIYFQSGRTQKALQDYNTALQLNPD 107

Query: 98  LMSAF---VQYSA--GKYQQAASLGEEYITQYPES 127
           L SA+     Y A  G+   A +  +  I   P  
Sbjct: 108 LASAYNNRANYYAACGQLASALADYDRAIDLNPRH 142


>gi|330504464|ref|YP_004381333.1| hypothetical protein MDS_3550 [Pseudomonas mendocina NK-01]
 gi|328918750|gb|AEB59581.1| hypothetical protein MDS_3550 [Pseudomonas mendocina NK-01]
          Length = 268

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 18/54 (33%), Gaps = 4/54 (7%)

Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
             Y +G+ Y     +    QR     L Y  +++  +  S     A   +   R
Sbjct: 93  ALYQIGLIYMNRFNE----QRDDAKALNYFYKVLNEFPASQAASRAEERIATIR 142


>gi|300866713|ref|ZP_07111397.1| TPR repeat-containing protein [Oscillatoria sp. PCC 6506]
 gi|300335313|emb|CBN56557.1| TPR repeat-containing protein [Oscillatoria sp. PCC 6506]
          Length = 398

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 43/150 (28%), Gaps = 38/150 (25%)

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT-NSP--------YVK 176
            +      YYL G+S+         DQ   K  +   +R +E    NS         Y  
Sbjct: 265 GNPQNAEGYYLRGLSH--------LDQGKLKDAIADFNRSLELNPKNSEAYFNRGVAYAY 316

Query: 177 GARFY-----VTVGRNQLAAKEVEI------GRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
                         +  +    + I         Y  RG    A       +A++  A  
Sbjct: 317 QEPTRSGSNVFDPLKQAIEDYTLAIKANPGYADAYYNRGVAHLANNDKPGAIADFQKA-- 374

Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQE 255
                    E Y  L   D+ ++ +  I+E
Sbjct: 375 --------AELYQKLGRKDDYQQALKKIKE 396


>gi|291400403|ref|XP_002716556.1| PREDICTED: leprecan-like 1 [Oryctolagus cuniculus]
          Length = 709

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 6/68 (8%)

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           F  Y  G+Y +A    + Y+  +P+ ++V     L  + Y + + D   D  +     + 
Sbjct: 315 FAYYRVGEYVKALECAKAYLLFHPDDEDV-----LDNVDYYESLLDDDLDPESI-EARED 368

Query: 162 MSRIVERY 169
            +  V+R+
Sbjct: 369 SAMFVKRH 376


>gi|194373325|emb|CAM32586.2| N-acetylglucosaminyl transferase protein [Herbaspirillum
           seropedicae]
          Length = 391

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 4/70 (5%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             +    +   +YE    +LK     +A E FN+      ++  A ++LL          
Sbjct: 100 PDLPAEHHGHALYELGQDYLKAGLLDRAEESFNRLIDTQ-YSAQAGRALLEI---YQREK 155

Query: 109 KYQQAASLGE 118
           ++++A S  E
Sbjct: 156 EWERAISAAE 165


>gi|159027487|emb|CAO89452.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 266

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 30/232 (12%), Positives = 68/232 (29%), Gaps = 59/232 (25%)

Query: 30  IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
           +++         +  D    S   +R    + EKA+   ++ ++++A  Y+ Q    FP 
Sbjct: 9   LSLLLFFALPIAAYADSPTISEEQIREGEVIAEKALEATEKGDYAQAESYWTQLVAKFPT 68

Query: 90  AG--VARKS-------LLMSAFVQYSA----------------------GKYQQAASLGE 118
                + +         L  A   ++                       GKYQ+A +   
Sbjct: 69  NPAVWSNRGNARVSLNKLEDAIADFNQAIAIAPDAPDPYLNRGTALEGEGKYQEAIADYN 128

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           + +   P      + Y   G +   +           +  ++   +  +   N  + +  
Sbjct: 129 KVLELAPND---AFAYNNRGNAEGGL--------GDWEAAVKDYRQATQLAPNFAWAQ-- 175

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
                     LA  E+         G Y  A+ + + +   Y        A+
Sbjct: 176 ------ANLALALYEL---------GRYPEAVQKMRNIARKYPMFPDVRAAL 212


>gi|218131122|ref|ZP_03459926.1| hypothetical protein BACEGG_02727 [Bacteroides eggerthii DSM 20697]
 gi|317477000|ref|ZP_07936242.1| tetratricopeptide [Bacteroides eggerthii 1_2_48FAA]
 gi|217986642|gb|EEC52976.1| hypothetical protein BACEGG_02727 [Bacteroides eggerthii DSM 20697]
 gi|316906793|gb|EFV28505.1| tetratricopeptide [Bacteroides eggerthii 1_2_48FAA]
          Length = 281

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 7/69 (10%), Positives = 19/69 (27%), Gaps = 4/69 (5%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            +        +++ A + +    +       A           Y A    +A    E  +
Sbjct: 57  AEGDSAYMRNDYASAIQIYESLLKK---GEAAE-IYYNLGNSYYKADDIAKAILNYERAL 112

Query: 122 TQYPESKNV 130
              P + ++
Sbjct: 113 LLQPGNADI 121


>gi|190150049|ref|YP_001968574.1| hypothetical protein APP7_0780 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|189915180|gb|ACE61432.1| hypothetical protein APP7_0780 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
          Length = 398

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 82/212 (38%), Gaps = 34/212 (16%)

Query: 48  LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           LD+  D   ++++  K   A  F+    + +A  Y+     +      A  SL     V 
Sbjct: 103 LDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDE---PEFAVNSLTQLMTVY 159

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
               ++++A ++ E+ I   P++  +   +Y     YAQ I++   D       L  +S+
Sbjct: 160 QKTKEWKKAINVAEKLIKIEPDTDKIPLSHYY--CEYAQAIKNEDLDGH-----LSALSK 212

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
            +E                      A   + +G YYL + ++ +A+  ++ +L    D  
Sbjct: 213 ALEYSPQC-----------------ARASILLGDYYLAQNQFQSALKNYEHILQQDPD-- 253

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQER 256
              E + ++   Y  +A  D A   + LI+  
Sbjct: 254 FISEVIEKIKACY--MAENDLANYELFLIRAN 283


>gi|124024556|ref|YP_001018863.1| hypothetical protein P9303_28681 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964842|gb|ABM79598.1| Hypothetical protein P9303_28681 [Prochlorococcus marinus str. MIT
           9303]
          Length = 539

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 18/143 (12%), Positives = 40/143 (27%), Gaps = 27/143 (18%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF-----VQYSAGKYQQAASL 116
            +        ++  A   +N+     P           +A+      +     +Q A S 
Sbjct: 365 NRGSAKDDLGDYQGAIADYNKAIAINP--------QDDAAYNNRGNAKQKLKDHQGAISD 416

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
             + I   P++           +SY         D    +  +   ++ +E   +S    
Sbjct: 417 YSKAIAINPQN----------AISYTNRGNTKD-DLGDYQGAIADFNKAIEIKPDS---A 462

Query: 177 GARFYVTVGRNQLAAKEVEIGRY 199
            A       ++ L   +  I  Y
Sbjct: 463 NAYNNRGNAKDDLGDHQGAIADY 485



 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/99 (11%), Positives = 30/99 (30%), Gaps = 14/99 (14%)

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           A+ +Y    YQ+A +   + I  +P++                   +     +  +  + 
Sbjct: 299 AYAKYDLRDYQEAIADYTKTIEIHPQNT-----------VSYNNRGNAKQKLKDHQGAIA 347

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
             ++ +     +     A       ++ L   +  I  Y
Sbjct: 348 DFNKAIAIDPQN---HTAYTNRGSAKDDLGDYQGAIADY 383


>gi|118359319|ref|XP_001012899.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89294666|gb|EAR92654.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 1122

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 63/191 (32%), Gaps = 38/191 (19%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAAS 115
            ++ ++A  F  ++  S+A E F +     P  +   +        +  Y  G    +  
Sbjct: 326 EDLLDEAYSFFDQKKESEAIEKFKKVIEINPNSYETYS-----SIGYCYYIIGDTINSEE 380

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
             ++ I     +KN    YY +G  Y    +         +  +  + + ++    + Y 
Sbjct: 381 SFKKSIEL---NKNYSRAYYYLGCEYFMQGKQ--------EQAILNLKQSIKL---NKYD 426

Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
             + F +                 Y ++GE   AI  F+  +       + E+A   +  
Sbjct: 427 ADSHFKIGYI--------------YYEKGEDDIAINYFKQAIKINP---YYEQAYNMIGN 469

Query: 236 AYVALALMDEA 246
            Y      ++A
Sbjct: 470 IYNYQQKQEDA 480



 Score = 36.6 bits (84), Expect = 3.2,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 59/216 (27%), Gaps = 30/216 (13%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            YEK    +    F +A +                ++  M   +     K + A    ++
Sbjct: 437 YYEKGEDDIAINYFKQAIKI----------NPYYEQAYNMIGNIYNYQQKQEDAIIWYDK 486

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN-------- 171
            I   P   +    Y  +G+ Y    +         +   +    +V  Y N        
Sbjct: 487 AIQLNPNFGDN---YNNLGLQYYNQ-KQFDQALWYFQKSAEKSKNLVNAYVNQGLCYQNL 542

Query: 172 --SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
                               +     +   Y  +     +I ++Q+ +     +    +A
Sbjct: 543 NQQDEAIQQYQKAIEVDPNFSDAHYNLALIYYDKKLMKESIEQYQIAIDVKPSS---YDA 599

Query: 230 MARLVEAYVALALMDEAREVVS---LIQERYPQGYW 262
              +  AY +L   DEA +       I+  Y    +
Sbjct: 600 YYNMGIAYHSLQQYDEAIQSYKNAIKIKANYNNAIY 635


>gi|75911170|ref|YP_325466.1| hypothetical protein Ava_4974 [Anabaena variabilis ATCC 29413]
 gi|75704895|gb|ABA24571.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
          Length = 422

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 6/84 (7%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             E Y + +   K+++++ A E F++  +  P+   A  + L      Y +G    A S 
Sbjct: 2   NNEFYNQGLEKAKQRDYAGAIEEFSRALKLTPY--FAE-AYLQRGLAYYDSGAILLAVSD 58

Query: 117 GEEYITQYPESKNVDYVYYLVGMS 140
             E I   PES      YY   ++
Sbjct: 59  YTEVIRINPESVE---AYYCRSLA 79


>gi|89898762|ref|YP_515872.1| hypothetical protein CF0955 [Chlamydophila felis Fe/C-56]
 gi|89332134|dbj|BAE81727.1| conserved hypothetical protein [Chlamydophila felis Fe/C-56]
          Length = 335

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 38/112 (33%), Gaps = 14/112 (12%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D    + +Y K+V+     N   A           P      K+ +   ++     ++ +
Sbjct: 141 DPWNPQSLYNKSVVLTDMGNEKDAIALLETAVSKNPL-YW--KAWIKLGYLLSRHKQWDR 197

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           A    E  +   P   ++   +Y +G+ Y  + +        T+L L+    
Sbjct: 198 ATEAYERVVQLRP---DLSDGHYNLGLCYLTLDK--------TRLALKAFQE 238


>gi|226229318|ref|YP_002763424.1| hypothetical protein GAU_3912 [Gemmatimonas aurantiaca T-27]
 gi|226092509|dbj|BAH40954.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 308

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 55/177 (31%), Gaps = 27/177 (15%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYP-ESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
            +  A      G  + A ++ +  +   P  S ++    Y   +  A+ I D   D    
Sbjct: 33  EVSRARALIERGDGENARAVLDSLVGAAPLASLDLAEALYWRAV-LAERIGDAERD---- 87

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
                   R+V     SP    A   +    + L             RG    A P F+ 
Sbjct: 88  ------WKRLVIEAPLSPRTPDALLRLGEL-DML-------------RGHPADARPYFER 127

Query: 216 VLANYSDAEHAEEAMARLVEAY-VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           V+  + D+         LV +Y     L    + + +L     P+G      + L +
Sbjct: 128 VVREFPDSTRIARGTIWLVRSYFDESELPRGCQTLRALPVASVPEGELRLQADELRR 184



 Score = 36.6 bits (84), Expect = 3.2,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 41/137 (29%), Gaps = 20/137 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE-Y 120
            +A   ++  +   A    +      P       + L  A   Y      +     E  +
Sbjct: 35  SRARALIERGDGENARAVLDSLVGAAP------LASLDLAEALYWRAVLAERIGDAERDW 88

Query: 121 ITQ---YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
                  P S         +G     M+R  P D R       Y  R+V  + +S   + 
Sbjct: 89  KRLVIEAPLSPRTPDALLRLG--ELDMLRGHPADARP------YFERVVREFPDS--TRI 138

Query: 178 ARFYVTVGRNQLAAKEV 194
           AR  + + R+     E+
Sbjct: 139 ARGTIWLVRSYFDESEL 155


>gi|221640122|ref|YP_002526384.1| hypothetical protein RSKD131_2023 [Rhodobacter sphaeroides KD131]
 gi|221160903|gb|ACM01883.1| Hypothetical Protein RSKD131_2023 [Rhodobacter sphaeroides KD131]
          Length = 274

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 16/126 (12%), Positives = 39/126 (30%), Gaps = 10/126 (7%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ-QAASLGEE 119
           +++A   L + +F  A +     +  +    +  ++  +        G+    A +  E 
Sbjct: 155 FDRAQEVLGQGDFRTAADLLKTFAETYTGGQLTYEAHYLRGEALSQLGETANAARAYLES 214

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           +    P+          +G +          D R T      ++ +  R+  SP    A 
Sbjct: 215 FSGD-PDGPRAPEALLKLGRALG--------DLRQTPEACVTLAEVGTRFPGSPSAAEAA 265

Query: 180 FYVTVG 185
             +   
Sbjct: 266 TTMQGL 271



 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 36/123 (29%), Gaps = 20/123 (16%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           Q   +     +    E YT       A +      +QL                      
Sbjct: 164 QGDFRTAADLLKTFAETYTGGQLTYEAHYLRGEALSQLGE-----------------TAN 206

Query: 212 RFQLVLANY---SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
             +  L ++    D   A EA+ +L  A   L    EA   ++ +  R+P    A    T
Sbjct: 207 AARAYLESFSGDPDGPRAPEALLKLGRALGDLRQTPEACVTLAEVGTRFPGSPSAAEAAT 266

Query: 269 LVK 271
            ++
Sbjct: 267 TMQ 269


>gi|198274646|ref|ZP_03207178.1| hypothetical protein BACPLE_00798 [Bacteroides plebeius DSM 17135]
 gi|198272093|gb|EDY96362.1| hypothetical protein BACPLE_00798 [Bacteroides plebeius DSM 17135]
          Length = 250

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 7/69 (10%), Positives = 21/69 (30%), Gaps = 3/69 (4%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            +A    +++ FS+A   + +  +       +           +      +A    E  +
Sbjct: 25  AEADEAYQKEKFSEAASLYEEILQT--QGE-SADIYYNLGNAYFKLKNTAKAVLNYERAL 81

Query: 122 TQYPESKNV 130
              P   ++
Sbjct: 82  LLNPGDADI 90


>gi|197337384|ref|YP_002158319.1| transporter [Vibrio fischeri MJ11]
 gi|197314636|gb|ACH64085.1| transporter [Vibrio fischeri MJ11]
          Length = 623

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 32/87 (36%), Gaps = 7/87 (8%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEY----FN-QCSRDFPFAGVARKSLLMSAFV 103
           D     +Y+++ Y+ A    + + +  A +Y    +          +    +S    A  
Sbjct: 347 DYNAHQQYEQKEYQAASEQFQSKQWKGAAQYKAGDYKGAIESLTGLSD--VQSQYNLANA 404

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNV 130
               G+ + A +  E  +  +P+ K+ 
Sbjct: 405 LAQNGQLEDAKAQYESLLQAHPDMKDA 431


>gi|169342370|ref|ZP_02863436.1| tetratricopeptide repeat protein [Clostridium perfringens C str.
           JGS1495]
 gi|169299490|gb|EDS81554.1| tetratricopeptide repeat protein [Clostridium perfringens C str.
           JGS1495]
          Length = 481

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 45/142 (31%), Gaps = 14/142 (9%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM--SAF---- 102
           +++      +++Y K     KE+ +  A + F +    + F+     S L     +    
Sbjct: 346 ENLMKTDGVKDLYLKGSDLFKEKKYEDALKDFEKA---YAFSS---DSYLRPHLIYFMGT 399

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
              +  K  +A    +EY+  Y    + +   Y        +       +  +    +Y 
Sbjct: 400 SYENLDKNTEAIKYFQEYLKDYKAKPDAEDFMY-TPQCLYNLAILYNK-EGNSAESKKYA 457

Query: 163 SRIVERYTNSPYVKGARFYVTV 184
             I   Y N+ +       +  
Sbjct: 458 QEIENDYPNTMFYNDVTKKIIY 479



 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 27/73 (36%), Gaps = 6/73 (8%)

Query: 200 YLKRGEYVAAIPRFQLVLANY---SDAE---HAEEAMARLVEAYVALALMDEAREVVSLI 253
           Y    +   AI  FQ  L +Y    DAE   +  + +  L   Y       E+++    I
Sbjct: 401 YENLDKNTEAIKYFQEYLKDYKAKPDAEDFMYTPQCLYNLAILYNKEGNSAESKKYAQEI 460

Query: 254 QERYPQGYWARYV 266
           +  YP   +   V
Sbjct: 461 ENDYPNTMFYNDV 473


>gi|94967941|ref|YP_589989.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94549991|gb|ABF39915.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
           Ellin345]
          Length = 748

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 18/133 (13%), Positives = 49/133 (36%), Gaps = 20/133 (15%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-- 94
           G    ++++   +   + +  + +Y+ A + +++    +A    ++  +  P    A   
Sbjct: 622 GEFDDAAKEFQQELEVNPQSVQAMYQLAYIRMQQHQAPEASSLLSEVIKQQPNNSDAHYQ 681

Query: 95  --KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
             K+LL       +  + + +          +P     DY Y+   +S+A        D 
Sbjct: 682 LGKALLEQGDAGGATRELETSV-------KLHPT----DYAYFQ--LSHAYARTGREAD- 727

Query: 153 RATKLMLQYMSRI 165
             +K  L+   ++
Sbjct: 728 --SKQALEEFEKL 738


>gi|89075799|ref|ZP_01162187.1| hypothetical protein SKA34_03129 [Photobacterium sp. SKA34]
 gi|89048531|gb|EAR54106.1| hypothetical protein SKA34_03129 [Photobacterium sp. SKA34]
          Length = 240

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 51/131 (38%), Gaps = 10/131 (7%)

Query: 57  QREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           +   YEKAV   LKE+++  A + F      +P +     +      + ++  +   AA+
Sbjct: 119 ENAAYEKAVNLILKEKDYKGATKAFQSFLTAYPNSVYKPNASYWLGQLFFAQNQLADAAT 178

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
             +        SK  D     +G+     I +   D  A K    Y   +++ Y NS Y 
Sbjct: 179 NFKVVADTKDSSKRAD-ALLKLGV-----IAERGNDIAAAK---TYYQEVIKAYPNSTYA 229

Query: 176 KGARFYVTVGR 186
             A+  +T  +
Sbjct: 230 NQAKTALTKLK 240



 Score = 36.6 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 39/130 (30%), Gaps = 23/130 (17%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               Y+ A    + ++T YP S       Y +G  +    +                  +
Sbjct: 132 KEKDYKGATKAFQSFLTAYPNSVYKPNASYWLGQLFFAQNQLAD--------AATNFKVV 183

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
            +   +S     A   + V   +    ++   + Y             Q V+  Y ++ +
Sbjct: 184 ADTK-DSSKRADALLKLGVIAER--GNDIAAAKTYY------------QEVIKAYPNSTY 228

Query: 226 AEEAMARLVE 235
           A +A   L +
Sbjct: 229 ANQAKTALTK 238


>gi|307263382|ref|ZP_07544998.1| hypothetical protein appser13_7990 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|306871260|gb|EFN02988.1| hypothetical protein appser13_7990 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 391

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 82/212 (38%), Gaps = 34/212 (16%)

Query: 48  LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           LD+  D   ++++  K   A  F+    + +A  Y+     +      A  SL     V 
Sbjct: 96  LDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDE---PEFAVNSLTQLMTVY 152

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
               ++++A ++ E+ I   P++  +   +Y     YAQ I++   D       L  +S+
Sbjct: 153 QKTKEWKKAINVAEKLIKIEPDTDKIPLSHYY--CEYAQAIKNEDLDGH-----LSALSK 205

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
            +E                      A   + +G YYL + ++ +A+  ++ +L    D  
Sbjct: 206 ALEYSPQC-----------------ARASILLGDYYLAQNQFQSALKNYEHILQQDPD-- 246

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQER 256
              E + ++   Y  +A  D A   + LI+  
Sbjct: 247 FISEVIEKIKACY--MAENDLANYELFLIRAN 276


>gi|307249950|ref|ZP_07531922.1| hypothetical protein appser4_7460 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306858010|gb|EFM90094.1| hypothetical protein appser4_7460 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
          Length = 391

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 82/212 (38%), Gaps = 34/212 (16%)

Query: 48  LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           LD+  D   ++++  K   A  F+    + +A  Y+     +      A  SL     V 
Sbjct: 96  LDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDE---PEFAVNSLTQLMTVY 152

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
               ++++A ++ E+ I   P++  +   +Y     YAQ I++   D       L  +S+
Sbjct: 153 QKTKEWKKAINVAEKLIKIEPDTDKIPLSHYY--CEYAQAIKNEDLDGH-----LSALSK 205

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
            +E                      A   + +G YYL + ++ +A+  ++ +L    D  
Sbjct: 206 ALEYSPQC-----------------ARASILLGDYYLAQNQFQSALKNYEHILQQDPD-- 246

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQER 256
              E + ++   Y  +A  D A   + LI+  
Sbjct: 247 FISEVIEKIKACY--MAENDLANYELFLIRAN 276


>gi|301310435|ref|ZP_07216374.1| putative tetratricopeptide repeat protein [Bacteroides sp. 20_3]
 gi|300832009|gb|EFK62640.1| putative tetratricopeptide repeat protein [Bacteroides sp. 20_3]
          Length = 267

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 33/106 (31%), Gaps = 19/106 (17%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            +FF + +C +     Q +                  ++A +   +++++KA E +    
Sbjct: 22  VLFFLLTLCLIGSAYAQDTAL----------------KEAEVAYTKEDYAKAIELYEGIL 65

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           +       A           Y AGK   A    E  +   P   + 
Sbjct: 66  KSN--GESAA-VYYNLGNAYYKAGKIAPAILNYERCLLLDPGDSDA 108


>gi|298242090|ref|ZP_06965897.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963]
 gi|297555144|gb|EFH89008.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963]
          Length = 1001

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 58/169 (34%), Gaps = 29/169 (17%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE-SKNVDYVYYL------VGMSYAQMI 145
           A +  + +A + +  G+Y  A    +  I  Y   +++V+   Y+        ++ A   
Sbjct: 156 AGQIDVNAAIINFELGQYDAALRAFDRAIETYQMCNEDVE--LYIARARGNKALALAAQG 213

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
           R         K          ERY  S  +             LA +++ I   Y  +G 
Sbjct: 214 RFREA-VEMHKQARATF----ERYGQSEEIS------------LAREDLNIAEIYAAQGH 256

Query: 206 YVAAI---PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
           Y  A+    + +     +   E   EA  ++    + L    EA E+ +
Sbjct: 257 YSQALLLYNQCRETFERHQMLESRAEATHQMCVCLLRLNRSREAYELAA 305


>gi|168217474|ref|ZP_02643099.1| tetratricopeptide repeat protein [Clostridium perfringens NCTC
           8239]
 gi|182380480|gb|EDT77959.1| tetratricopeptide repeat protein [Clostridium perfringens NCTC
           8239]
          Length = 475

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 45/142 (31%), Gaps = 14/142 (9%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM--SAF---- 102
           +++      +++Y K     KE+ +  A + F +    + F+     S L     +    
Sbjct: 340 ENLMKTDGVKDLYLKGSDLFKEKKYEDALKDFEKA---YAFSS---DSYLRPHLIYFMGT 393

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
              +  K  +A    +EY+  Y    + +   Y        +       +  +    +Y 
Sbjct: 394 SYENLDKNTEAIKYFQEYLKDYKAKPDAEDFMY-TPQCLYNLAILYNK-EGNSAESKKYA 451

Query: 163 SRIVERYTNSPYVKGARFYVTV 184
             I   Y N+ +       +  
Sbjct: 452 QEIENDYPNTMFYNDVTKKIIY 473



 Score = 37.0 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 27/73 (36%), Gaps = 6/73 (8%)

Query: 200 YLKRGEYVAAIPRFQLVLANY---SDAE---HAEEAMARLVEAYVALALMDEAREVVSLI 253
           Y    +   AI  FQ  L +Y    DAE   +  + +  L   Y       E+++    I
Sbjct: 395 YENLDKNTEAIKYFQEYLKDYKAKPDAEDFMYTPQCLYNLAILYNKEGNSAESKKYAQEI 454

Query: 254 QERYPQGYWARYV 266
           +  YP   +   V
Sbjct: 455 ENDYPNTMFYNDV 467


>gi|165976153|ref|YP_001651746.1| tetratricopeptide repeat protein [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|165876254|gb|ABY69302.1| predicted N-acetylglucosaminyl transferase [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
          Length = 398

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 82/212 (38%), Gaps = 34/212 (16%)

Query: 48  LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           LD+  D   ++++  K   A  F+    + +A  Y+     +      A  SL     V 
Sbjct: 103 LDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDE---PEFAVNSLTQLMTVY 159

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
               ++++A ++ E+ I   P++  +   +Y     YAQ I++   D       L  +S+
Sbjct: 160 QKTKEWKKAINVAEKLIKIEPDTDKIPLSHYY--CEYAQAIKNEDLDGH-----LSALSK 212

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
            +E                      A   + +G YYL + ++ +A+  ++ +L    D  
Sbjct: 213 ALEYSPQC-----------------ARASILLGDYYLAQNQFQSALKNYEHILQQDPD-- 253

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQER 256
              E + ++   Y  +A  D A   + LI+  
Sbjct: 254 FISEVIEKIKACY--MAENDLANYELFLIRAN 283


>gi|218779222|ref|YP_002430540.1| hypothetical protein Dalk_1372 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218760606|gb|ACL03072.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 668

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 54/142 (38%), Gaps = 11/142 (7%)

Query: 33  CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
           CF  G+  +           D      +Y  A +F  E+++  A  +F + +   PF   
Sbjct: 495 CFKAGFHEEGRSIRDEIVQADPEEVIVLYNIATMFYDEKDYKNAKIWFQKNTEANPFQYE 554

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           A   L   A    + G+   A +   E +  +P   N+  V+ L+G+ Y +     P   
Sbjct: 555 AYTFLGSIA---LNQGETDAALANYLEALNLHP---NLPEVHNLLGLLYIKKGLAAP--- 605

Query: 153 RATKLMLQYMSRIVERYTNSPY 174
              +   +   R+   + ++PY
Sbjct: 606 --AEAHFKESMRLAPDFPDAPY 625


>gi|120599217|ref|YP_963791.1| tetratricopeptide domain-containing protein [Shewanella sp.
           W3-18-1]
 gi|146292709|ref|YP_001183133.1| tetratricopeptide domain-containing protein [Shewanella
           putrefaciens CN-32]
 gi|120559310|gb|ABM25237.1| Tetratricopeptide domain protein [Shewanella sp. W3-18-1]
 gi|145564399|gb|ABP75334.1| Tetratricopeptide domain protein [Shewanella putrefaciens CN-32]
 gi|319426013|gb|ADV54087.1| tol-pal system protein YbgF [Shewanella putrefaciens 200]
          Length = 249

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 40/124 (32%), Gaps = 22/124 (17%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
              KY  A      +I QYP+S       Y +G                     Q  + +
Sbjct: 139 KERKYDDAIPAFRAFIKQYPDSVYAANANYWLGQLLFNKSEFA--------EAKQAFNTV 190

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           V R+++S     +   + +                 K G+   A   +Q V+ +Y+++  
Sbjct: 191 VVRFSDSNKRGDSLVKLGMIAE--------------KTGDKAGATQYYQQVVKDYANSAA 236

Query: 226 AEEA 229
           A  A
Sbjct: 237 ARIA 240



 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 46/131 (35%), Gaps = 17/131 (12%)

Query: 61  YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE- 118
           YE AV   LKE+ +  A   F    + +P +  A  +      + ++  ++ +A      
Sbjct: 130 YESAVNLVLKERKYDDAIPAFRAFIKQYPDSVYAANANYWLGQLLFNKSEFAEAKQAFNT 189

Query: 119 ---EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
               +        +         +    MI +   D+       QY  ++V+ Y NS   
Sbjct: 190 VVVRFSDSNKRGDS---------LVKLGMIAEKTGDKAG---ATQYYQQVVKDYANSAAA 237

Query: 176 KGARFYVTVGR 186
           + A+  +   +
Sbjct: 238 RIAQQQLAAIK 248


>gi|67920503|ref|ZP_00514023.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
 gi|67857987|gb|EAM53226.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
          Length = 278

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 38/263 (14%), Positives = 80/263 (30%), Gaps = 65/263 (24%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV--------------Y 61
             +L K  +T+   I  CF  G    +  + +     +   +  +              Y
Sbjct: 1   MIKLKKIYITLL--IGGCFSFGNIALNLAESFAQDNPETPQENVLEEPEETPSLTAIDWY 58

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            K V  ++ +N+  A   F++  +  P       +     +      K++++    ++ I
Sbjct: 59  NKGVDEIEARNYQGAIAAFSESIKLDPTDA---DAYYNRGYSYLVLEKFEESIEDYDQAI 115

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                  +  Y Y     +Y Q+        +  +  +   S+ +E    S Y       
Sbjct: 116 EL---KSDFAYAYGNRCYAYYQL--------KNHEQAITDCSKAIEL--ESKY------- 155

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGE-------YVAAIPRFQLVLANYSDAEHAEEAMARLV 234
                          G +Y+ RG        + AAI  +   +     + +  +A     
Sbjct: 156 ---------------GDFYIYRGNAKDDLEMHEAAILDYNQAIII---SPNNPKAYYNRA 197

Query: 235 EAYVALALMDEA-REVVSLIQER 256
            AY  L    +A  +    IQ  
Sbjct: 198 LAYNRLGKSLQAVEDYSKAIQFN 220


>gi|298375544|ref|ZP_06985501.1| tetratricopeptide repeat containing protein [Bacteroides sp.
           3_1_19]
 gi|298268044|gb|EFI09700.1| tetratricopeptide repeat containing protein [Bacteroides sp.
           3_1_19]
          Length = 255

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 33/106 (31%), Gaps = 19/106 (17%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            +FF + +C +     Q +                  ++A +   +++++KA E +    
Sbjct: 10  VLFFLLTLCLIGSAYAQDTAL----------------KEAEVAYTKEDYAKAIELYEGIL 53

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           +       A           Y AGK   A    E  +   P   + 
Sbjct: 54  KSN--GESAA-VYYNLGNAYYKAGKIAPAILNYERCLLLDPGDSDA 96


>gi|291556355|emb|CBL33472.1| ABC-type transport system, involved in lipoprotein release,
           permease component [Eubacterium siraeum V10Sc8a]
          Length = 1144

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 17/133 (12%), Positives = 38/133 (28%), Gaps = 34/133 (25%)

Query: 61  YEKAVLFLKEQ--NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG--KYQQAASL 116
           YE      ++    ++     +      +     A K+   + + QY +G  KY    + 
Sbjct: 476 YEDGKKQYEDGYSQYTSGLAQYESAKAQY----DAGKAQYDAGYAQYVSGKAKYDSGKAE 531

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            ++           +Y  Y  G+      +     + A     +                
Sbjct: 532 YDK-----------NYADYEKGLKEYNEGKTAL--ETAKTDADKQF-------------A 565

Query: 177 GARFYVTVGRNQL 189
            A+  +  GR +L
Sbjct: 566 DAQKKIDDGREKL 578


>gi|262381902|ref|ZP_06075040.1| BatE protein [Bacteroides sp. 2_1_33B]
 gi|262297079|gb|EEY85009.1| BatE protein [Bacteroides sp. 2_1_33B]
          Length = 253

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 33/106 (31%), Gaps = 19/106 (17%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            +FF + +C +     Q +                  ++A +   +++++KA E +    
Sbjct: 8   VLFFLLTLCLIGSAYAQDTAL----------------KEAEVAYTKEDYAKAIELYEGIL 51

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           +       A           Y AGK   A    E  +   P   + 
Sbjct: 52  KSN--GESAA-VYYNLGNAYYKAGKIAPAILNYERCLLLDPGDSDA 94


>gi|218888081|ref|YP_002437402.1| N-acetylmuramoyl-L-alanine amidase [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218759035|gb|ACL09934.1| N-acetylmuramoyl-L-alanine amidase [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 789

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 46/104 (44%), Gaps = 12/104 (11%)

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
                   A + + V + +LAA+         ++ +++AA+ R+  V++ Y +   A++ 
Sbjct: 282 PEGELAPNAAYGMAVAQEELAARS-------WRKDDFLAAVARYNDVVSAYPEDSLADDC 334

Query: 230 MARLVEAYVALALMDEAREVVSLIQE---RYPQGYWARYVETLV 270
           M R     +    +D+A     L++    RYP+G  A     L+
Sbjct: 335 MLRAAR--LRATRLDDAEGAHQLLEAQLRRYPKGDMAGEARALL 376



 Score = 40.1 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 43/152 (28%), Gaps = 25/152 (16%)

Query: 52  TDVRYQREVYEKAVLFLK--EQNFSKAY---------EYFNQCSRDFPFAGVARKSLLMS 100
           +D     ++Y +A   L+    +  +A            +       P   +A  +    
Sbjct: 235 SDPAKAAKLYAEARKELEAVRGDARRAALREPWLRVMALYEGARDAAPEGELAPNAAYGM 294

Query: 101 AFVQ-------YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
           A  Q       +    +  A +   + ++ YPE    D    L        +R    D  
Sbjct: 295 AVAQEELAARSWRKDDFLAAVARYNDVVSAYPEDSLADDCM-LRA----ARLRATRLD-- 347

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
             +   Q +   + RY        AR  +   
Sbjct: 348 DAEGAHQLLEAQLRRYPKGDMAGEARALLADL 379


>gi|159027771|emb|CAO89641.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 178

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 20/140 (14%), Positives = 50/140 (35%), Gaps = 18/140 (12%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR--KSLL--MSAFVQYSAGKYQ 111
             +E YE   L+L ++ + +A     +  +      +    ++L+     F  ++  + +
Sbjct: 51  TAKEYYELGSLYLDKKLYVQALSLLQKALKISEEESIEPENQALIYNAIGFSYFAQEQLE 110

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            A    +E I  YP+        Y + ++    + +     +  K  L+     ++   N
Sbjct: 111 LAIRNYKEAIKLYPQ--------YSIALNNLGNVYEKK---QMAKKALETYEETLKFDPN 159

Query: 172 SPYVKGARFYVTVGRNQLAA 191
           +     A+      R + A 
Sbjct: 160 N---TVAKKRTESLRKRFAE 176


>gi|110802315|ref|YP_698451.1| TPR repeat-containing protein [Clostridium perfringens SM101]
 gi|110682816|gb|ABG86186.1| tetratricopeptide repeat protein [Clostridium perfringens SM101]
          Length = 473

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 20/144 (13%), Positives = 46/144 (31%), Gaps = 14/144 (9%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM--SAF---- 102
           + +      +++Y K     KE+ +  A + F +    + F+     S L     +    
Sbjct: 338 EKLMKTDGVKDLYLKGSDLFKEKKYEDALKDFEKA---YAFSS---DSYLRPHLIYFMGT 391

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
              +  K  +A    +EY+  Y    + +   Y        +       +  +    +Y 
Sbjct: 392 SYENLDKNTEAIKYFQEYLKDYKAKPDAEDFMY-TPQCLYNLAILYNK-EGNSAESKKYA 449

Query: 163 SRIVERYTNSPYVKGARFYVTVGR 186
             I   Y N+ +       +  G+
Sbjct: 450 QEIENDYPNTMFYNDVTKKIIYGK 473



 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 27/73 (36%), Gaps = 6/73 (8%)

Query: 200 YLKRGEYVAAIPRFQLVLANY---SDAE---HAEEAMARLVEAYVALALMDEAREVVSLI 253
           Y    +   AI  FQ  L +Y    DAE   +  + +  L   Y       E+++    I
Sbjct: 393 YENLDKNTEAIKYFQEYLKDYKAKPDAEDFMYTPQCLYNLAILYNKEGNSAESKKYAQEI 452

Query: 254 QERYPQGYWARYV 266
           +  YP   +   V
Sbjct: 453 ENDYPNTMFYNDV 465


>gi|57106584|ref|XP_534923.1| PREDICTED: similar to FK506-binding protein 4 (Peptidyl-prolyl
           cis-trans isomerase) (PPIase) (Rotamase) (p59 protein)
           (HSP binding immunophilin) (HBI) (FKBP52 protein) (52
           kDa FK506 binding protein) (FKBP59) [Canis familiaris]
          Length = 459

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 19/144 (13%), Positives = 43/144 (29%), Gaps = 26/144 (18%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARKSL-------LMSAFVQYSAGK 109
           E+  ++ KE  + +A   + +      +        A+K+        L  A        
Sbjct: 275 ERGTVYFKEGKYKQALLQYKKIISWLEYESSFSNEDAQKAQALRLASHLNLAMCHLKLQA 334

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           +  A     + +     ++      +  G ++   + D                ++++ Y
Sbjct: 335 FSAAVESCNKALELDSNNEKG---LFRRGEAHL-AVNDFDL-------ARADFQKVLQLY 383

Query: 170 TNSPYVKGARFYV--TVGRNQLAA 191
             S     A+  V     R QLA 
Sbjct: 384 P-SNKAAKAQLAVCQQRIRKQLAR 406



 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 32/78 (41%), Gaps = 2/78 (2%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKAYEYF 80
             L    ++A+C L      ++ +    ++  D   ++ ++ +    L   +F  A   F
Sbjct: 317 LRLASHLNLAMCHLKLQAFSAAVESCNKALELDSNNEKGLFRRGEAHLAVNDFDLARADF 376

Query: 81  NQCSRDFPFAGVARKSLL 98
            +  + +P +  A K+ L
Sbjct: 377 QKVLQLYP-SNKAAKAQL 393


>gi|32491159|ref|NP_871413.1| hypothetical protein WGLp410 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166366|dbj|BAC24556.1| ybgF [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 251

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 18/118 (15%), Positives = 38/118 (32%), Gaps = 8/118 (6%)

Query: 68  LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
           L  +N  KA E F    + +P +     +      + Y  GK   +       I ++P  
Sbjct: 142 LGNKNHDKAIEKFKNFIKKYPKSIYTPNAKYWLGQLYYIKGKSDDSIYYFASMIKEFPNF 201

Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           +       L      Q  +D+   ++  K ++ +       Y +      A+  +   
Sbjct: 202 QKTPDAL-LKIAILMQKNKDIEKAKKIYKKIINF-------YPHDKASNEAKKRLNSL 251



 Score = 40.1 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 10/74 (13%), Positives = 30/74 (40%), Gaps = 14/74 (18%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             ++     +++Y  S Y   A++++              G+ Y  +G+   +I  F  +
Sbjct: 149 KAIEKFKNFIKKYPKSIYTPNAKYWL--------------GQLYYIKGKSDDSIYYFASM 194

Query: 217 LANYSDAEHAEEAM 230
           +  + + +   +A+
Sbjct: 195 IKEFPNFQKTPDAL 208



 Score = 35.9 bits (82), Expect = 5.8,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 27/63 (42%), Gaps = 2/63 (3%)

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           AI +F+  +  Y  + +   A   L + Y      D++    + + + +P   + +  + 
Sbjct: 150 AIEKFKNFIKKYPKSIYTPNAKYWLGQLYYIKGKSDDSIYYFASMIKEFPN--FQKTPDA 207

Query: 269 LVK 271
           L+K
Sbjct: 208 LLK 210


>gi|86144577|ref|ZP_01062909.1| hypothetical protein MED222_09208 [Vibrio sp. MED222]
 gi|85837476|gb|EAQ55588.1| hypothetical protein MED222_09208 [Vibrio sp. MED222]
          Length = 652

 Score = 41.3 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 31/119 (26%), Gaps = 27/119 (22%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYE----------------KAVLFLKEQNFS 74
               +     Q +        TD +   ++Y+                K +   K  +F 
Sbjct: 325 CGLAVFVSFSQPNTAFANPWKTDDQVGYQLYQDEDFQQAAEQFEQQEWKGIAQYKAGDFE 384

Query: 75  KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
            A +     S           +    A  Q   GKY QA    +  +   PE     Y 
Sbjct: 385 AAEQTLQGLS--------GEDARYNLANAQAKQGKYDQAIKEYQRILESNPEH---AYA 432


>gi|319902113|ref|YP_004161841.1| Tetratricopeptide TPR_1 repeat-containing protein [Bacteroides
           helcogenes P 36-108]
 gi|319417144|gb|ADV44255.1| Tetratricopeptide TPR_1 repeat-containing protein [Bacteroides
           helcogenes P 36-108]
          Length = 277

 Score = 41.3 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/120 (13%), Positives = 35/120 (29%), Gaps = 14/120 (11%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE----------KAVLFLKE 70
           K  L     + V  +  + + S+  + +DS++ V    E             +       
Sbjct: 2   KKTLFFVLVLVVIAINTFAQNSTDTLQIDSISSVEPHAEFSAVKQEGNVTKAEGDSAYMR 61

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
            ++  A + +    +       A           Y AG   +A    E      P + ++
Sbjct: 62  NDYVSAIQIYENLLKK---GEAAE-IYYNLGNSYYKAGDIARAILNYERASLLQPGNTDI 117


>gi|297181850|gb|ADI18029.1| hypothetical protein [uncultured delta proteobacterium
           HF0200_19J16]
          Length = 258

 Score = 41.3 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 14/94 (14%), Positives = 39/94 (41%), Gaps = 9/94 (9%)

Query: 182 VTVGRNQLAAKE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
           +   ++ L   +         + +G  +L+ G    A   + ++L  Y++  +   A+  
Sbjct: 153 LVYLQDILKQSDKTPLKAQILMSLGNGFLEHGHATQAAYYYGIILREYTETSNVPNALYY 212

Query: 233 LVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
           L +A   LA  ++   + + + + +P+   A+  
Sbjct: 213 LGKAMEELAETEKQNVLWNELIKNHPKSPLAKRA 246



 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 42/119 (35%), Gaps = 8/119 (6%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
            ++ L+  N  +A  Y     +      +  + L+         G   QAA      + +
Sbjct: 140 GLISLQAGNPDQALVYLQDILKQSDKTPLKAQILMSLGNGFLEHGHATQAAYYYGIILRE 199

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
           Y E+ NV    Y +G +  ++          T+      + +++ +  SP  K A   +
Sbjct: 200 YTETSNVPNALYYLGKAMEELAE--------TEKQNVLWNELIKNHPKSPLAKRAIKRL 250


>gi|193215605|ref|YP_001996804.1| tetratricopeptide domain-containing protein [Chloroherpeton
           thalassium ATCC 35110]
 gi|193089082|gb|ACF14357.1| Tetratricopeptide TPR_2 repeat protein [Chloroherpeton thalassium
           ATCC 35110]
          Length = 231

 Score = 41.3 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 3/50 (6%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
            +++  +  ++KA  YF +    +PF      +L+M A+  Y   KY++A
Sbjct: 160 GLIYYGKNEYAKAERYFEKVVNLYPF-DY--DALVMLAWTNYRLKKYREA 206


>gi|78484968|ref|YP_390893.1| hypothetical protein Tcr_0623 [Thiomicrospira crunogena XCL-2]
 gi|78363254|gb|ABB41219.1| conserved hypothetical protein [Thiomicrospira crunogena XCL-2]
          Length = 213

 Score = 41.3 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 14/105 (13%)

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
            V   Q A   +L+   +++E   +SPY  G                + I ++Y     +
Sbjct: 61  QVKQSQNALGDVLRDGLKLMEEQPDSPYASGVA--------------LMIAKHYFDEKAF 106

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
             AI  +Q  + +  D      A  RLV  YV   + ++A +V++
Sbjct: 107 DKAIENYQWTIEHAPDHSIQLIARLRLVTVYVQEKMFEKADQVLA 151


>gi|78356417|ref|YP_387866.1| N-acetylmuramoyl-L-alanine amidase [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78218822|gb|ABB38171.1| N-acetylmuramoyl-L-alanine amidase [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
          Length = 604

 Score = 41.3 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 40/111 (36%), Gaps = 8/111 (7%)

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
           Q    + +R    P    + +Y    R++L A+      Y  +R     A+  FQ +   
Sbjct: 66  QDFMDVYKRSPRGPLAPKSLYYAGRVRSELGARSYLASDY--RR-----AVEYFQRLANR 118

Query: 220 YSDAEHAEEAMARLVEAY-VALALMDEAREVVSLIQERYPQGYWARYVETL 269
           +      ++A+ R    Y   L     AR +++ I   + QG        L
Sbjct: 119 FPSHSWTDDALYRAAAIYKDRLGDHGTARSLLNTILRDHQQGDMYYKAIAL 169



 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 43/131 (32%), Gaps = 9/131 (6%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L +  ++++  L      +S D   +S    R    + + A       N+ +  + F   
Sbjct: 14  LWLVIAVSLACLPAPAGAASLDASFNSA--WRQFHSLTKDARKGKYRDNWLRIEQDFMDV 71

Query: 84  SRDFPFAGVARKSLL-------MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            +  P   +A KSL              Y A  Y++A    +    ++P     D   Y 
Sbjct: 72  YKRSPRGPLAPKSLYYAGRVRSELGARSYLASDYRRAVEYFQRLANRFPSHSWTDDALYR 131

Query: 137 VGMSYAQMIRD 147
               Y   + D
Sbjct: 132 AAAIYKDRLGD 142



 Score = 35.5 bits (81), Expect = 8.8,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 28/79 (35%), Gaps = 5/79 (6%)

Query: 118 EEYITQY---PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
           ++++  Y   P         Y  G   +++     Y     +  ++Y  R+  R+ +  +
Sbjct: 66  QDFMDVYKRSPRGPLAPKSLYYAGRVRSELGAR-SYLASDYRRAVEYFQRLANRFPSHSW 124

Query: 175 VKGARFYVTVG-RNQLAAK 192
              A +      +++L   
Sbjct: 125 TDDALYRAAAIYKDRLGDH 143


>gi|323247654|gb|EGA31600.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
          Length = 77

 Score = 41.3 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 8/82 (9%)

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
            Y+ GK   AA      +  YP+S       Y VG+        +  D+  T        
Sbjct: 4   NYNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGV--------IMQDKGDTAKAKAVYQ 55

Query: 164 RIVERYTNSPYVKGARFYVTVG 185
           +++ +Y  +   K A+  +   
Sbjct: 56  QVINKYPGTDGAKQAQKRLNAM 77



 Score = 35.5 bits (81), Expect = 7.7,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 26/71 (36%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
             L   +     A  YF    +++P +  A  ++     +    G   +A ++ ++ I +
Sbjct: 1   GQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVINK 60

Query: 124 YPESKNVDYVY 134
           YP +       
Sbjct: 61  YPGTDGAKQAQ 71


>gi|320537415|ref|ZP_08037365.1| cyclic nucleotide-binding domain protein [Treponema phagedenis
           F0421]
 gi|320145741|gb|EFW37407.1| cyclic nucleotide-binding domain protein [Treponema phagedenis
           F0421]
          Length = 332

 Score = 41.3 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 17/113 (15%), Positives = 37/113 (32%), Gaps = 27/113 (23%)

Query: 61  YEKAVLFLKEQNFSKAYEYF---------NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           ++ A     ++N+  AY  +               +          + +    Y   +Y 
Sbjct: 212 FKLAEDLAAQKNWKDAYIQYHSVIETGTDENIEASY----------IGAGHCLYEQREYV 261

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           +   L   +ITQ+P+S  +      +G+ Y         D +     LQ+  +
Sbjct: 262 RCLQLLTNFITQHPKSLKLAEALMYIGLCY--------RDMKRPDKALQFFDK 306


>gi|307197750|gb|EFN78899.1| RNA polymerase-associated protein CTR9-like protein [Harpegnathos
           saltator]
          Length = 1015

 Score = 41.3 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 51/141 (36%), Gaps = 24/141 (17%)

Query: 133 VYYLVGM------SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------R 179
            Y L+ +      +  Q  +D   ++R     L    +++     + +           +
Sbjct: 600 AYSLIALGNIWLQTLHQSGKDKEREKRHQDRALAMYKQVLRNDPKNIWAANGIGAVLAHK 659

Query: 180 FYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
             V   R+  A  +E         + I   Y+++ ++V+AI  ++  L  +    H  E 
Sbjct: 660 GCVNEARDIFAQVREATAEFCDVWLNIAHIYVEQKQFVSAIQMYENCLRKFYRYHHV-EV 718

Query: 230 MARLVEAYVALALMDEAREVV 250
           +  L  AY     + EA+  +
Sbjct: 719 LQYLGRAYFKAGKLKEAKLTL 739


>gi|301058344|ref|ZP_07199377.1| von Willebrand factor type A domain protein [delta proteobacterium
           NaphS2]
 gi|300447580|gb|EFK11312.1| von Willebrand factor type A domain protein [delta proteobacterium
           NaphS2]
          Length = 598

 Score = 41.3 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 36/88 (40%), Gaps = 3/88 (3%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           D  +D+  D+RY+   Y +     +  +F  A   F+   +         K++     V 
Sbjct: 373 DQDMDNPRDIRYR---YNRGCADYQASDFKGAMAAFSSVLKRTDDPETRVKAVFNLGNVA 429

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDY 132
           Y  G +  A++  ++ I   P ++N  Y
Sbjct: 430 YKKGDFSAASAYYQQAIVLDPANENARY 457


>gi|15669619|ref|NP_248432.1| O-linked GlnNAc transferase [Methanocaldococcus jannaschii DSM
           2661]
 gi|3183372|sp|Q58823|Y1428_METJA RecName: Full=TPR repeat-containing protein MJ1428
 gi|1500309|gb|AAB99438.1| O-linked GlnNAc transferase [Methanocaldococcus jannaschii DSM
           2661]
          Length = 567

 Score = 41.3 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 69/213 (32%), Gaps = 44/213 (20%)

Query: 62  EKAVLFLKEQNFSKAYE-YFNQCSRDFPFA-GVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            +A  +L E  + KA E Y     +                A+  Y   KY  A     E
Sbjct: 19  TEANYYLDEGIYDKAVECYLKALEKKNTNPIDW-----FNLAYALYHLEKYDSALEAINE 73

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +   P +    Y  YL G+ + +                     I+  Y    Y+K A 
Sbjct: 74  ALKISPSNI---YFAYLKGLIHYKR------------------GEIILAY---KYLKKAS 109

Query: 180 FYV--TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH-AEEAMARLVEA 236
             +        L       G   +K G Y  A+   +  L +Y  A      A+ +  + 
Sbjct: 110 EKIKNEELFEIL-------GDISVKYGRYEEAL---KYYLKSYKMANSKNLNALFKAGKI 159

Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYVETL 269
           Y+    +D+A +  + I ++ P     + VE +
Sbjct: 160 YLLFGDIDKAYDAFNEILQQNPSHECKKIVECM 192


>gi|22299177|ref|NP_682424.1| hypothetical protein tll1634 [Thermosynechococcus elongatus BP-1]
 gi|22295359|dbj|BAC09186.1| tll1634 [Thermosynechococcus elongatus BP-1]
          Length = 581

 Score = 41.3 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 6/68 (8%), Positives = 23/68 (33%), Gaps = 3/68 (4%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
                ++ +  +A  +  + +  +P     ++ L+          ++ +AA   + +   
Sbjct: 222 GEFLAQQGSLKEACAHLEKAASLYPDQPDIQRGLITL---YDRQQQWLEAALAAQRFALL 278

Query: 124 YPESKNVD 131
            P+     
Sbjct: 279 NPDHPATP 286


>gi|332024785|gb|EGI64973.1| RNA polymerase-associated protein CTR9-like protein [Acromyrmex
           echinatior]
          Length = 1225

 Score = 41.3 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 51/141 (36%), Gaps = 24/141 (17%)

Query: 133 VYYLVGM------SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------R 179
            Y L+ +      +  Q  +D   ++R     L    +++     + +           +
Sbjct: 600 AYSLIALGNIWLQTLHQSGKDKEREKRHQDRALAMYKQVLRNDPKNIWAANGIGAVLAHK 659

Query: 180 FYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
             V   R+  A  +E         + I   Y+++ ++V+AI  ++  L  +    H  E 
Sbjct: 660 GCVNEARDIFAQVREATAEFCDVWLNIAHIYVEQKQFVSAIQMYENCLRKFYKYHHV-EV 718

Query: 230 MARLVEAYVALALMDEAREVV 250
           +  L  AY     + EA+  +
Sbjct: 719 LQYLGRAYFKAGKLKEAKLTL 739


>gi|330721300|gb|EGG99385.1| hypothetical protein imdm_1171 [gamma proteobacterium IMCC2047]
          Length = 925

 Score = 41.3 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 14/97 (14%), Positives = 30/97 (30%), Gaps = 11/97 (11%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A+  +   + + A                  ++ +M      +  +Y  A +  ++ I Q
Sbjct: 413 AIGQIASGDINSAISELENAVTR---PDATEQTNIMLILSYLNQQQYDNAFAAIDKAIAQ 469

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           YP+S        L  ++Y            A +   Q
Sbjct: 470 YPKSPAF---LNLKAIAYENQQNT-----EAAREAYQ 498


>gi|225619426|ref|YP_002720652.1| cAMP-binding protein [Brachyspira hyodysenteriae WA1]
 gi|225214245|gb|ACN82979.1| cAMP-binding protein [Brachyspira hyodysenteriae WA1]
          Length = 328

 Score = 41.3 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 61/189 (32%), Gaps = 28/189 (14%)

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYY-----LVGMSYAQMIRDVPYD------- 151
            +   KY+ A    + YI       + D  +Y      +     ++      D       
Sbjct: 139 YFKNKKYRNALYAYKRYIQY----ADEDSAFYNTVKEKIEECKDELDITDDSDIAPPVSN 194

Query: 152 --------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ---LAAKE-VEIGRY 199
                   Q    +     ++ VE Y N+ YV   + +  + ++    +A      +G+ 
Sbjct: 195 APVSNAKAQTKATINDPAYNKAVELYNNNDYVNSLKAFNNLIKSSDTAVAENSIFYMGKC 254

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           Y    +Y  A       +  Y  + + +EA+  L ++  A     +A+     +    P 
Sbjct: 255 YYNINKYDNASTVLLSAIKKYPKSSNVKEAILFLAKSCEASGNKTKAKAYYQKVISMPPM 314

Query: 260 GYWARYVET 268
             +++    
Sbjct: 315 DNFSKEANA 323



 Score = 35.5 bits (81), Expect = 7.5,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 46/126 (36%), Gaps = 13/126 (10%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           T        Y KAV      ++  + + FN   +      VA  S+       Y+  KY 
Sbjct: 204 TKATINDPAYNKAVELYNNNDYVNSLKAFNNLIKS-SDTAVAENSIFYMGKCYYNINKYD 262

Query: 112 QAASLGEEYITQYPESKNVDYV-YYL-----------VGMSYAQMIRDVPYDQRATKLML 159
            A+++    I +YP+S NV     +L              +Y Q +  +P     +K   
Sbjct: 263 NASTVLLSAIKKYPKSSNVKEAILFLAKSCEASGNKTKAKAYYQKVISMPPMDNFSKEAN 322

Query: 160 QYMSRI 165
             +SR+
Sbjct: 323 ASISRL 328


>gi|166364168|ref|YP_001656441.1| periplasmic protein [Microcystis aeruginosa NIES-843]
 gi|166086541|dbj|BAG01249.1| periplasmic protein [Microcystis aeruginosa NIES-843]
          Length = 363

 Score = 41.3 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 81/251 (32%), Gaps = 46/251 (18%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
             Q  +  L +      CF        +    +  V+      E+  +A   +K  N+ +
Sbjct: 1   MKQFTRLILLVGLLAGGCFSASIAIADNPAGAI--VSKDSQVNELLRQARQLVKNGNYGE 58

Query: 76  AYEYFN---QCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           A   +        +    F+G          F+Q   G Y  AA   ++ ++  P + + 
Sbjct: 59  AIAIYERAAALDGNNAKIFSG--------IGFLQTRQGDYNAAAQAYQKALSLDPSNPDF 110

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
            +     G S A  I D      A    +Q   + V+ Y                     
Sbjct: 111 FHAL---GYSLAN-IGDYDNAATAYYYAIQIEPKNVQHY--------------------- 145

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
              + +G   L++  Y  A   +Q VLA   + + A E    + +A +      EA + +
Sbjct: 146 ---LGLGVVLLRQKNYAKAGEVYQWVLALDPNNQQAHE---IMGKALIEQNKSSEALDFL 199

Query: 251 SLIQERYPQGY 261
               +R+P   
Sbjct: 200 QKSLQRFPNNS 210


>gi|91789548|ref|YP_550500.1| hypothetical protein Bpro_3702 [Polaromonas sp. JS666]
 gi|91698773|gb|ABE45602.1| TPR repeat [Polaromonas sp. JS666]
          Length = 166

 Score = 41.3 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 39/112 (34%), Gaps = 5/112 (4%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +  F++  F ++ V  L       + D     V +V+     +      +  +N+++A  
Sbjct: 15  MNAFSIRSFIALPVLGLAFAGAALAADFQTMPVQNVQIDD--FAAGKKAIDAKNWAQAVS 72

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
            F++     P       +     +     GKY +A +   + +   P  K  
Sbjct: 73  SFSKVVARNPTNA---DAYSYLGYANRWLGKYDEAFAAYGKALALDPRHKGA 121


>gi|237716509|ref|ZP_04546990.1| BatE [Bacteroides sp. D1]
 gi|262408107|ref|ZP_06084655.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294645102|ref|ZP_06722828.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a]
 gi|294809503|ref|ZP_06768206.1| tetratricopeptide repeat protein [Bacteroides xylanisolvens SD CC
           1b]
 gi|298484183|ref|ZP_07002349.1| aerotolerance-related exported protein [Bacteroides sp. D22]
 gi|229444156|gb|EEO49947.1| BatE [Bacteroides sp. D1]
 gi|262354915|gb|EEZ04007.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292639608|gb|EFF57900.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a]
 gi|294443321|gb|EFG12085.1| tetratricopeptide repeat protein [Bacteroides xylanisolvens SD CC
           1b]
 gi|298269687|gb|EFI11282.1| aerotolerance-related exported protein [Bacteroides sp. D22]
          Length = 277

 Score = 41.3 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 13/121 (10%), Positives = 36/121 (29%), Gaps = 13/121 (10%)

Query: 19  LYKFALTIFFSIAV-CFLVGWERQSSRDVYLDSVTDVRY--------QREVYEKAVLFLK 69
           + K    I  S+++ CF        S+           +        +     +      
Sbjct: 1   MKKILFFILLSMSLTCFAQDSLNIDSKQTNGADSIHASHTTFSSNTLEDATKAEGDSAYI 60

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
           +++++ A + +    ++      A           Y  G+  +A    E  +   P + +
Sbjct: 61  KEDYAAAIQIYEALLKN---GE-AADVYYNLGNSYYKIGEIAKAVLNYERALLLQPGNGD 116

Query: 130 V 130
           +
Sbjct: 117 I 117


>gi|269104788|ref|ZP_06157484.1| TPR domain protein in aerotolerance operon [Photobacterium damselae
           subsp. damselae CIP 102761]
 gi|268161428|gb|EEZ39925.1| TPR domain protein in aerotolerance operon [Photobacterium damselae
           subsp. damselae CIP 102761]
          Length = 691

 Score = 41.3 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 28/85 (32%), Gaps = 11/85 (12%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
            Y D+V D         K +   K   F +A +           +               
Sbjct: 355 QYTDAVKDFSSPAW---KGIAQYKAGQFHQAIKTLEPLKDT--TSRY------NLGNAYA 403

Query: 106 SAGKYQQAASLGEEYITQYPESKNV 130
            +G+Y++A +  EE + Q P + + 
Sbjct: 404 QSGQYEKAINTYEEVLKQEPTNTDA 428


>gi|218675993|ref|YP_002394812.1| hypothetical protein VS_II0211 [Vibrio splendidus LGP32]
 gi|218324261|emb|CAV25553.1| Conserved hypothetical protein [Vibrio splendidus LGP32]
          Length = 609

 Score = 41.3 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 31/119 (26%), Gaps = 27/119 (22%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYE----------------KAVLFLKEQNFS 74
               +     Q +        TD +   ++Y+                K +   K  +F 
Sbjct: 325 CGLAVFVSFSQPNTAFANPWKTDDQVGYQLYQDEDFQQAAEQFEQQEWKGIAQYKAGDFE 384

Query: 75  KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
            A +     S           +    A  Q   GKY QA    +  +   PE     Y 
Sbjct: 385 AAEQTLQGLS--------GEDARYNLANAQAKQGKYDQAIKEYQRILESNPEH---AYA 432


>gi|167719468|ref|ZP_02402704.1| tetratricopeptide repeat family protein [Burkholderia pseudomallei
           DM98]
          Length = 965

 Score = 41.3 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 50/192 (26%), Gaps = 40/192 (20%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           +A L L   +F +A   F +     P    A +S         +  +   A +  +  + 
Sbjct: 420 RAELALDTGDFDEALSQFERLREQRP---DAPESYANLIPALAALERRDDAIAALQRALE 476

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
              +            ++                          ++Y             
Sbjct: 477 LNSKHPG--------ALNNGVQ-----------------FYLRTQQY---DKAMELAQRY 508

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEY---VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                +LA+     G  Y     Y    A++ R   +        H  EA+  L      
Sbjct: 509 VGAHGELASAHTMCGLVYHNLKAYDRAEASLRRALEIE------PHNAEALFALGTVLER 562

Query: 240 LALMDEAREVVS 251
           +  + E+ EV+ 
Sbjct: 563 VDRLAESEEVLR 574


>gi|325959202|ref|YP_004290668.1| hypothetical protein Metbo_1459 [Methanobacterium sp. AL-21]
 gi|325330634|gb|ADZ09696.1| Tetratricopeptide TPR_2 repeat-containing protein [Methanobacterium
           sp. AL-21]
          Length = 498

 Score = 41.3 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 44/110 (40%), Gaps = 15/110 (13%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           +K +    + ++ KA   FN+      F     ++     FV  +  +Y++A  + ++ I
Sbjct: 140 DKGIALKNKNDYYKATACFNRALD---FKAENTRAYYNKVFVFETLKEYEEALKVCDQII 196

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
              P S    Y +YL G+ Y +M        R  +  L+     ++   +
Sbjct: 197 KIDPSS----YAWYLKGIIYGRM--------RRYREALESFDESLKLKPD 234


>gi|325106717|ref|YP_004267785.1| methyltransferase type 11 [Planctomyces brasiliensis DSM 5305]
 gi|324966985|gb|ADY57763.1| Methyltransferase type 11 [Planctomyces brasiliensis DSM 5305]
          Length = 1391

 Score = 41.3 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 26/215 (12%), Positives = 61/215 (28%), Gaps = 34/215 (15%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
             +    E +E+AV   ++     A   +       P      ++L +   + +  G++ 
Sbjct: 3   PHIPLADEAFEEAVSIHQQGRLDDAASRYQTILATSPNHA---QALHLLGVIDHQRGEHL 59

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            A    E  +   P     D V +   ++               +   +    ++    N
Sbjct: 60  AAVEKIERALKLKP-----DAVLFRKNLA------SAARSAGQLEKARKSCENVLAAEPN 108

Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
            P        +     ++   E           ++  A   ++  L    +     E + 
Sbjct: 109 EP-------VMFTLLGRICETE----------EKWTEAARHYEESLRIGLNNSETLETLL 151

Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
            L + Y  +    +A      I +R P   W  + 
Sbjct: 152 HLGDCYSKVGRSTDAERCYRDIIDRDP---WHLFA 183


>gi|257452395|ref|ZP_05617694.1| Tetratricopeptide TPR_2 repeat protein [Fusobacterium sp. 3_1_5R]
          Length = 185

 Score = 41.3 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 33/76 (43%), Gaps = 8/76 (10%)

Query: 70  EQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           ++++  A  +F +                   A+V Y   KY++A    E+ +   P S 
Sbjct: 51  KKDYDTAIYFFEKLMTLDATNGNWPGF----LAYVYYEQEKYEKAIPYFEKSVDLSPNSP 106

Query: 129 NVDYVYYLVGMSYAQM 144
            +   Y+L+G SY+++
Sbjct: 107 FI---YFLLGNSYSRL 119


>gi|160893383|ref|ZP_02074169.1| hypothetical protein CLOL250_00933 [Clostridium sp. L2-50]
 gi|156864958|gb|EDO58389.1| hypothetical protein CLOL250_00933 [Clostridium sp. L2-50]
          Length = 713

 Score = 41.3 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 61/177 (34%), Gaps = 27/177 (15%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE----KAVLFLKEQNFSKAYEYFNQCS 84
            I  C + G    S     +  V     + + Y     +A   L++ + + A + +    
Sbjct: 283 LIMFCTMGGLSLASVACAVIGGVKKNEIKEQNYSNKILEAENALQDNDVNNAIKIYKDAI 342

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE----------EYITQYPESKNVDYVY 134
                +  A   LL + +  Y         +  E           Y+T+Y   K  D V 
Sbjct: 343 ALDETSSDAYLGLLDT-YAYYYDATQDAEKTSSEGMDSGAKLGVRYVTKY-IDKVQDDVV 400

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRI--VERYTNSPYVKGARFYVTVGRNQL 189
           Y V + Y   I+D        K  +QY +++   E + +      A +Y  +  N++
Sbjct: 401 YEVAILYYNEIQDY-------KAAMQYFNQVNDKENFPD--EAAQASYYSAICENKI 448


>gi|7020961|dbj|BAA91331.1| unnamed protein product [Homo sapiens]
          Length = 336

 Score = 41.3 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 45/150 (30%), Gaps = 29/150 (19%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQ----------REVYEKAVLFLKEQNFSKAYE 78
                 L+G       D  LD       +           +++  AV      NF KA E
Sbjct: 70  MATGLVLIGTGSSVKLDKELDLAVKTMVEISRTQPLTRREQLHVSAVETFANGNFPKACE 129

Query: 79  YFNQCSRDFPFAGVARKSLLMSA-----FVQYSAGKYQQAASLGEEYITQYPE-SKNVDY 132
            + Q  +D P          M A        +  G  +Q           YP  + ++  
Sbjct: 130 LWEQILQDHPTD--------MLALKFSHDAYFYLGYQEQMRDSVAR---IYPFWTPDIPL 178

Query: 133 VYYLVGMSYAQMIRDVPYDQ--RATKLMLQ 160
             Y+ G+    ++    YDQ  +  K  L 
Sbjct: 179 SSYVKGIYSFGLMETNFYDQAEKLAKEALS 208


>gi|116623654|ref|YP_825810.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116226816|gb|ABJ85525.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 748

 Score = 41.3 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/124 (12%), Positives = 39/124 (31%), Gaps = 15/124 (12%)

Query: 49  DSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           +         E Y +    ++  + F+ A   F + +R  P + V     +  A      
Sbjct: 454 EVARQKPAPAEFYVELGQAWMSARKFANAIAAFEEAARRSPDSPV---VAVNLADALTEG 510

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           G+ ++A ++    I    E   +    Y +G++     R            +    + + 
Sbjct: 511 GQPERAIAVLNRAIRATQEDPLL---RYQLGITQTAAGRSA--------EAIAAFRQTIA 559

Query: 168 RYTN 171
              +
Sbjct: 560 LDPD 563


>gi|326431629|gb|EGD77199.1| hypothetical protein PTSG_08291 [Salpingoeca sp. ATCC 50818]
          Length = 822

 Score = 41.3 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 9/80 (11%), Positives = 21/80 (26%), Gaps = 10/80 (12%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           K     K      A + +    R +P +      ++            +Y +A    E  
Sbjct: 131 KGNEHFKRGEHDSAVDAYTTALRLYPDSLVLYTNRAQ-----AHLKLQQYSEALDDCEWA 185

Query: 121 ITQYPESKNVDYVYYLVGMS 140
           +  +             G++
Sbjct: 186 LRLHDRHPK---ALLRKGLA 202


>gi|307822495|ref|ZP_07652726.1| type IV pilus biogenesis/stability protein PilW [Methylobacter
           tundripaludum SV96]
 gi|307736099|gb|EFO06945.1| type IV pilus biogenesis/stability protein PilW [Methylobacter
           tundripaludum SV96]
          Length = 253

 Score = 41.3 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 45/113 (39%), Gaps = 24/113 (21%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE-IGRYYLKRGEYVAAIPRFQ 214
           +    Y  + ++   NS Y               A  E++ I     ++G+Y AA    +
Sbjct: 157 QQAENYFRQALQL--NSTYAA-------------ALSEMQKIA---YEKGDYWAA----K 194

Query: 215 LVLANYSD-AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
             L  Y   A H  E +    +A  AL   + ARE  +L+ E++P    A+ +
Sbjct: 195 GFLQRYLGVATHTPETLWFAAQAERALGNKELAREYKNLLLEKFPLSNEAKKI 247


>gi|261879446|ref|ZP_06005873.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
 gi|270334015|gb|EFA44801.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
          Length = 1122

 Score = 41.3 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 33/234 (14%), Positives = 67/234 (28%), Gaps = 62/234 (26%)

Query: 60  VYEKAVL---FLKEQNFSKAYEYFNQCSRDF-------------------------PFAG 91
           +Y         L + NF +A E   +  +                            +  
Sbjct: 61  LYTVGNKNSISLGKGNFDRAIEKAEKAIKLHSIKRRPVWNKRGRKTERDIEWLGRKEYNP 120

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
              K+ ++    Q+  G +  A+S        Y          Y    ++          
Sbjct: 121 FLWKAWMLMGRAQFYQGDFDAASSTFSYMARLYETQP----AIYGRAKAW---------- 166

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG-RNQL---AAKE--VEIGRYYLKRGE 205
                        + + Y  + ++  A   +    R+ +   A KE    +  YY+   +
Sbjct: 167 -------------LAKSYIENNFLYDAEDVIRNMQRDSIHWRAQKEWDYTLADYYIHIQQ 213

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQERYP 258
           Y  AIP  + V+ +    +        L +   AL    EA +    +I++  P
Sbjct: 214 YEQAIPYLKKVIKHEMRKKQKAREYFLLGQLQAALGNHQEAYKAYQKVIRQNPP 267



 Score = 35.5 bits (81), Expect = 8.7,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 18/47 (38%)

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           ++  YS  E  +E    L   Y        A   +S ++  YP+  W
Sbjct: 607 IVQQYSTFEKMDEVYYHLFLLYSRKGEPQLAESYISRLKSEYPKSQW 653


>gi|283796416|ref|ZP_06345569.1| putative tetratricopeptide repeat-containing domain protein
           [Clostridium sp. M62/1]
 gi|291075827|gb|EFE13191.1| putative tetratricopeptide repeat-containing domain protein
           [Clostridium sp. M62/1]
          Length = 465

 Score = 41.3 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 41/91 (45%), Gaps = 11/91 (12%)

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           ++L   A+  +SAG+   A +     +T  P++ N   V + +GM Y          ++ 
Sbjct: 356 QTLEDLAYTMWSAGRMDDALNYYNTCLTIRPDNPN---VLFNMGMIY--------RSKQD 404

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
               ++  +++  +Y +S Y + AR  +T  
Sbjct: 405 FAKAVELFTQVSTQYGDSEYAEKARNQLTEL 435


>gi|218661993|ref|ZP_03517923.1| TPR repeat-containing protein [Rhizobium etli IE4771]
          Length = 592

 Score = 41.3 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 31/86 (36%), Gaps = 6/86 (6%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G  +++ R++      D  +   +  +   +L+  +  KA +     S   P      +S
Sbjct: 51  GRMKEAKREIDTAIALDPSFDIALLARGRYYLQTGDRDKALQDLLAASTANPAHS---QS 107

Query: 97  LLMSAFVQYSAGK---YQQAASLGEE 119
            LM A   Y  G     QQA    + 
Sbjct: 108 QLMLAAAHYEKGDRIPSQQALDNADR 133


>gi|150400646|ref|YP_001324412.1| Pyrrolo-quinoline quinone [Methanococcus aeolicus Nankai-3]
 gi|150013349|gb|ABR55800.1| Pyrrolo-quinoline quinone [Methanococcus aeolicus Nankai-3]
          Length = 1037

 Score = 41.3 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 8/99 (8%), Positives = 35/99 (35%), Gaps = 9/99 (9%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR---KSL 97
            ++ +  ++  T +     + + +    +   ++ +    N+     P    A+   + +
Sbjct: 239 DNNNEEAIEYKTKIEKILALRQDSEELYRRGEYNHSLSKLNEILDINPNDEYAKHTIQVV 298

Query: 98  LMSAFV------QYSAGKYQQAASLGEEYITQYPESKNV 130
                +       Y    ++ A ++  E +   P+ +++
Sbjct: 299 QDMIDLMEEGNKYYINNDFEDAIAIYNEILKLNPKDEHI 337


>gi|303235927|ref|ZP_07322530.1| tetratricopeptide repeat protein [Prevotella disiens FB035-09AN]
 gi|302483800|gb|EFL46792.1| tetratricopeptide repeat protein [Prevotella disiens FB035-09AN]
          Length = 1176

 Score = 41.3 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 21/54 (38%)

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           A    + V  NY D E  ++    L   Y+       A   ++ ++  YP+  W
Sbjct: 613 AEKNLRRVSDNYPDYEEMDDVYYHLYLLYMRKNQPQLADSYINKLKANYPKSQW 666


>gi|254433450|ref|ZP_05046958.1| type IV pilus biogenesis/stability protein PilW [Nitrosococcus
           oceani AFC27]
 gi|207089783|gb|EDZ67054.1| type IV pilus biogenesis/stability protein PilW [Nitrosococcus
           oceani AFC27]
          Length = 253

 Score = 41.3 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 31/255 (12%), Positives = 73/255 (28%), Gaps = 26/255 (10%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           + +F  + + F       SS++  + S+   +  +   +  V + K+    +A +   + 
Sbjct: 2   IGVFAIMLLGFAGCASILSSQEQDIPSIDKEKAAKINVQLGVEYFKQGELEQALKKLERA 61

Query: 84  SRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
            +  P   +     +LL         G+ ++A    +  I                G+  
Sbjct: 62  IQQDPKLPSAYNALALLKQ-----RLGQAEEAEKYFQRAIKL---DPEYSEAQNNYGVFL 113

Query: 142 AQMIRDVPYDQR-----------ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
                    + R             +L  +      ++       +           +L 
Sbjct: 114 YNQGHYGDAEARFLEAVKNPLYGTPELAYENAGMAAQKQVEFDKAERYYRKALQLEPRLP 173

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYS-DAEHAEEAMARLVEAYVALALMDEAREV 249
                +     ++G Y     R Q  L  Y   A H  +++   +     L   D     
Sbjct: 174 KSLYHMAEISFEKGHYQ----RAQEYLQRYRVGARHTPKSLWLGIRIERELGNEDTVSSY 229

Query: 250 VSLIQERYPQGYWAR 264
             L++  +P    A+
Sbjct: 230 ALLLRRNFPDSPEAK 244


>gi|298243809|ref|ZP_06967616.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963]
 gi|297556863|gb|EFH90727.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963]
          Length = 1332

 Score = 41.3 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 73/238 (30%), Gaps = 44/238 (18%)

Query: 45   DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
            ++           RE  +    + + +    A +  N+     P      ++    A + 
Sbjct: 1108 EISARRPDPSTAVREYMDLVRHYRQSRQIDNALKVLNELVHLAPQEP---QAHEELADIY 1164

Query: 105  YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
             + G   +  +     +       N          +  Q I ++  +   ++  L    R
Sbjct: 1165 INRGLLDEGIAELRLLVDANLRRNNTAEA-----AATLQRIGNIFDETGDSEEALAAFCR 1219

Query: 165  IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL-ANYSDA 223
              E   NS         + + R        E+  +  + G    A  R+Q V+  +Y + 
Sbjct: 1220 AAELDPNS---------MDLLR--------EVVGFCFRVGHPQEAA-RYQAVIARHYFET 1261

Query: 224  EHAEEAMA-----------------RLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
            +  +EA+A                  L + Y A+   ++A  V   + +  P    AR
Sbjct: 1262 QQVKEAVAALQQLITIDRNNFDAYDMLGQTYQAVGEYEQASRVYRNLAKINPGSSIAR 1319


>gi|293371590|ref|ZP_06618004.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CMC 3f]
 gi|292633435|gb|EFF52004.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CMC 3f]
          Length = 277

 Score = 41.3 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/122 (9%), Positives = 37/122 (30%), Gaps = 15/122 (12%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE----------KAVLFL 68
           + +    I  S+++    G +  S      + V  +      +           +     
Sbjct: 1   MKRILFFILLSMSL-TCFGQDSLSIDTRQTNGVDSIHASHTTFSSNTLEDATKAEGDSAY 59

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
            +++++ A + +    ++      A           Y  G+  +A    E  +   P + 
Sbjct: 60  IKEDYAAAIQIYEALLKN---GE-AADVYYNLGNSYYKIGEIAKAVLNYERALLLQPGNG 115

Query: 129 NV 130
           ++
Sbjct: 116 DI 117


>gi|256027035|ref|ZP_05440869.1| TPR repeat-containing protein [Fusobacterium sp. D11]
 gi|289765018|ref|ZP_06524396.1| tetratricopeptide repeat family protein [Fusobacterium sp. D11]
 gi|289716573|gb|EFD80585.1| tetratricopeptide repeat family protein [Fusobacterium sp. D11]
          Length = 936

 Score = 41.3 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 67/204 (32%), Gaps = 29/204 (14%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y K +  +    + +A   F +       + ++ K  L      + A +Y +A   GE+Y
Sbjct: 508 YLKGIAAMGLGKYDEAEADFQKVLASGDQS-LSTKVYLNRVRNYFLAERYNEAVQAGEQY 566

Query: 121 I-TQYPESKNVDYVYYL--VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           +    P+ +   Y   L  +G+SY ++ +   YDQ                   S Y K 
Sbjct: 567 LSKITPDKEKAIYSEMLDKIGLSYFRLGK---YDQAR-----------------SYYSKI 606

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           A         +      +I   Y     Y  A   ++ V  NY +  + E+A  + +   
Sbjct: 607 ASMKGYEVYGK-----FQIADSYYNEKNYEKAASLYKEVYNNYGETFYGEQAYYKYIMTL 661

Query: 238 VALALMDEAREVVSLIQERYPQGY 261
                 D          + YP   
Sbjct: 662 SLTGNTDAFEREKDNFMKVYPNSN 685


>gi|85859052|ref|YP_461254.1| TPR repeat-containing protein [Syntrophus aciditrophicus SB]
 gi|85722143|gb|ABC77086.1| tetratricopeptide repeat family protein [Syntrophus aciditrophicus
           SB]
          Length = 569

 Score = 41.3 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 43/220 (19%), Positives = 75/220 (34%), Gaps = 33/220 (15%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMS 100
            + V      D      +   A L  KE+ +  A + + Q +R  P   +  A       
Sbjct: 331 DQSVLKPRTPDSGGLAGLAGLADLDFKERRYGAAVKKYEQLARSSPPRPSIYA-----NL 385

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL--- 157
            +       Y ++A   E+ +    +   +   YY +G +Y ++ R    D         
Sbjct: 386 GYAYTELKNYAESAKNYEKALKAGAKDPQI---YYNLGFAYEKLGR--EKDAIGAYEKYE 440

Query: 158 ----MLQYMSRIVERY-TNSPYVKGARFYVTVGRN--QLAAKEVEIGRYYLKRGEYVAAI 210
                LQ    + E Y +   Y +  + Y  + RN  + AA    +G  Y ++       
Sbjct: 441 KDKPSLQVTQTLAELYLSEKRYDQAIQAYRKLIRNNPKKAAWYASLGYVYGRK------- 493

Query: 211 PRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEA 246
                 + NY  A       +E   RL EAY    + +EA
Sbjct: 494 NDINNEIENYRTALRYDPEDDETCYRLAEAYERKGMYEEA 533


>gi|89069366|ref|ZP_01156725.1| hypothetical protein OG2516_15055 [Oceanicola granulosus HTCC2516]
 gi|89045133|gb|EAR51204.1| hypothetical protein OG2516_15055 [Oceanicola granulosus HTCC2516]
          Length = 185

 Score = 41.3 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 42/125 (33%), Gaps = 16/125 (12%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++E+    L+ Q+   A E+F       P    A  +    A   +   +   A     E
Sbjct: 68  LFERGSRALEAQDPVAAVEHFTAVIDFAP--DFAE-AYHGRATAYFLLDQTGPALDDLRE 124

Query: 120 YITQYPESKNVDYVYYLVGMS-YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            +   P          + G++   + I D       T+  L+   R++  + +  +V  +
Sbjct: 125 VLVLNPRHFGA-----MRGLAIILEQIGD-------TETALEVYRRVLAIHPHLAHVAES 172

Query: 179 RFYVT 183
              + 
Sbjct: 173 VTRLE 177


>gi|332703231|ref|ZP_08423319.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
           africanus str. Walvis Bay]
 gi|332553380|gb|EGJ50424.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
           africanus str. Walvis Bay]
          Length = 565

 Score = 41.3 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 35/243 (14%), Positives = 75/243 (30%), Gaps = 41/243 (16%)

Query: 11  IFEAWAYQLYKFALTIFFS--IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL 68
           I     ++  + A+ +  +  I  C  +        +  L    +  Y   VY  A    
Sbjct: 4   IKPLAGHKGLRLAMLMLAAPAIISCASMLPTNAGQMEWRLSPSAEASYNYLVYLDAARAG 63

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           K Q    A     +  +        ++  L  A +++  GK + AA L ++ + +YP  K
Sbjct: 64  KAQQADGALSKVLELDKR-------QEVYLELADLKWRLGKTEDAAVLLQDGLVRYPGDK 116

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
            +              + D+   Q+        +   +  + +       +  + + R +
Sbjct: 117 WL-----------TLRLADIYRLQQRYDGAATTLETYLAAHPSDAEALSRQARLALERER 165

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
            A                       + +LA      H+ E +    +A V LA   +A  
Sbjct: 166 FAQ---------------------ARDILAKLPADRHSPEVLYLRAKAEVGLAQNRKAIA 204

Query: 249 VVS 251
            + 
Sbjct: 205 TLR 207


>gi|237743476|ref|ZP_04573957.1| tetratricopeptide repeat family protein [Fusobacterium sp. 7_1]
 gi|229433255|gb|EEO43467.1| tetratricopeptide repeat family protein [Fusobacterium sp. 7_1]
          Length = 936

 Score = 41.3 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 67/204 (32%), Gaps = 29/204 (14%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y K +  +    + +A   F +       + ++ K  L      + A +Y +A   GE+Y
Sbjct: 508 YLKGIAAMGLGKYDEAEADFQKVLASGDQS-LSTKVYLNRVRNYFLAERYNEAVQAGEQY 566

Query: 121 I-TQYPESKNVDYVYYL--VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           +    P+ +   Y   L  +G+SY ++ +   YDQ                   S Y K 
Sbjct: 567 LSKITPDKEKAIYSEMLDKIGLSYFRLGK---YDQAR-----------------SYYSKI 606

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           A         +      +I   Y     Y  A   ++ V  NY +  + E+A  + +   
Sbjct: 607 ASMKGYEVYGK-----FQIADSYYNEKNYEKAASLYKEVYNNYGETFYGEQAYYKYIMTL 661

Query: 238 VALALMDEAREVVSLIQERYPQGY 261
                 D          + YP   
Sbjct: 662 SLTGNTDAFEREKDNFMKVYPNSN 685


>gi|218516472|ref|ZP_03513312.1| hypothetical protein Retl8_23901 [Rhizobium etli 8C-3]
          Length = 309

 Score = 41.3 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 35/100 (35%), Gaps = 14/100 (14%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
             Q  ++ +  Y +S     A F++                    +G+Y  A   F    
Sbjct: 224 AEQEFNQYIAHYPSSARAADANFWLGEAL--------------YSQGKYNEAAKTFLNAH 269

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
             Y  +E A E + +L  +  AL   + A   +  + +RY
Sbjct: 270 QKYGSSEKAPEMLLKLGMSLAALDNKETACATLREVSKRY 309



 Score = 40.9 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 47/140 (33%), Gaps = 14/140 (10%)

Query: 33  CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
             +       +          +  + + Y+ A   +   ++  A + FNQ    +P +  
Sbjct: 181 ANIGSGPIPDANGKTPQQTASLGSEADQYKAAYGHVLSGDYGTAEQEFNQYIAHYPSSAR 240

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP---ESKNVDYVYYLVGMSYAQMIRDVP 149
           A  +        YS GKY +A    + ++  +     S+    +   +GMS A +     
Sbjct: 241 AADANFWLGEALYSQGKYNEA---AKTFLNAHQKYGSSEKAPEMLLKLGMSLAALDNK-- 295

Query: 150 YDQRATKLMLQYMSRIVERY 169
                 +     +  + +RY
Sbjct: 296 ------ETACATLREVSKRY 309


>gi|254464115|ref|ZP_05077526.1| hypothetical protein RBY4I_714 [Rhodobacterales bacterium Y4I]
 gi|206685023|gb|EDZ45505.1| hypothetical protein RBY4I_714 [Rhodobacterales bacterium Y4I]
          Length = 275

 Score = 41.3 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 24/61 (39%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           ++  ++ A   L E  + +A E     ++ +P + +A  +           G  ++AA  
Sbjct: 152 EQADFDAAEALLAEGQYQEAAEKLAAFNQAYPGSPLAAAAEFSRGKALDGLGDTREAARA 211

Query: 117 G 117
            
Sbjct: 212 Y 212


>gi|225164791|ref|ZP_03727020.1| hypothetical protein ObacDRAFT_6016 [Opitutaceae bacterium TAV2]
 gi|224800604|gb|EEG18971.1| hypothetical protein ObacDRAFT_6016 [Opitutaceae bacterium TAV2]
          Length = 1672

 Score = 41.3 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/85 (14%), Positives = 25/85 (29%), Gaps = 17/85 (20%)

Query: 47   YLDSVTDVRYQREVYEKAVLFLKEQNFSKAY---EYFNQCSRDFPFAG---------VAR 94
            + D   D      +YE A+     + +  A    +   +  R  P+             R
Sbjct: 1021 FADKDPDNTTATRLYEHALGLFMGEEYEAAESVFQRLERIDRRMPYGKAIESIKANIHFR 1080

Query: 95   KSLLMSAFVQYSAGKYQQAASLGEE 119
            ++ LM         +  +A +    
Sbjct: 1081 RAQLMRI-----QNRIPEAIAEAHR 1100


>gi|307252293|ref|ZP_07534190.1| hypothetical protein appser6_8110 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306860215|gb|EFM92231.1| hypothetical protein appser6_8110 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
          Length = 391

 Score = 40.9 bits (95), Expect = 0.17,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 82/212 (38%), Gaps = 34/212 (16%)

Query: 48  LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           LD+  D   ++++  K   A  F+    + +A  Y+     +      A  SL     V 
Sbjct: 96  LDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDE---PEFAVNSLTQLMTVY 152

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
               ++++A ++ E+ I   P++  +   +Y     YAQ I++   D       L  +S+
Sbjct: 153 QKTKEWKKAINVAEKLIKIEPDTDKIPLSHYY--CEYAQAIKNEDLDGH-----LSALSK 205

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
            +E                      A   + +G YYL + ++ +A+  ++ +L    D  
Sbjct: 206 ALEYSPQC-----------------ARASILLGDYYLAQNQFQSALKNYERILQQDPD-- 246

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQER 256
              E + ++   Y  +A  D A   + LI+  
Sbjct: 247 FISEVIEKIKACY--MAENDLANYELFLIRAN 276


>gi|303244037|ref|ZP_07330376.1| TPR repeat-containing protein [Methanothermococcus okinawensis IH1]
 gi|302485689|gb|EFL48614.1| TPR repeat-containing protein [Methanothermococcus okinawensis IH1]
          Length = 456

 Score = 40.9 bits (95), Expect = 0.17,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 34/111 (30%), Gaps = 9/111 (8%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
            A+       + +A +  ++    FP +    ++    A      G    A     + I 
Sbjct: 258 AAICAYHLGKYDEAIKLCSEIPSKFPDSAYVGEAYRYMAISNMKKGNKNNAIKYLNDDIK 317

Query: 123 QYPE-------SK-NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
                      S  ++   Y+  G+SY  +I +   D    K  +     +
Sbjct: 318 TCTNALTSKDTSPSDIPGAYFERGLSYY-LIGEYTNDTTYYKKAMNDFEYL 367


>gi|260829275|ref|XP_002609587.1| hypothetical protein BRAFLDRAFT_87801 [Branchiostoma floridae]
 gi|229294949|gb|EEN65597.1| hypothetical protein BRAFLDRAFT_87801 [Branchiostoma floridae]
          Length = 738

 Score = 40.9 bits (95), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 23/55 (41%), Gaps = 2/55 (3%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL-MSAFVQYSAGKYQQA 113
           +Y    L   +  +S+A E + +  R  P +  A +SL  M     +   +  +A
Sbjct: 515 IYNLGRLQHDQGRYSEAIETYMEAIRRRP-SHYAPQSLYNMLGESLFKNSQLAEA 568


>gi|303251471|ref|ZP_07337647.1| hypothetical protein APP6_0676 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|302649703|gb|EFL79883.1| hypothetical protein APP6_0676 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
          Length = 398

 Score = 40.9 bits (95), Expect = 0.17,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 82/212 (38%), Gaps = 34/212 (16%)

Query: 48  LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           LD+  D   ++++  K   A  F+    + +A  Y+     +      A  SL     V 
Sbjct: 103 LDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDE---PEFAVNSLTQLMTVY 159

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
               ++++A ++ E+ I   P++  +   +Y     YAQ I++   D       L  +S+
Sbjct: 160 QKTKEWKKAINVAEKLIKIEPDTDKIPLSHYY--CEYAQAIKNEDLDGH-----LSALSK 212

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
            +E                      A   + +G YYL + ++ +A+  ++ +L    D  
Sbjct: 213 ALEYSPQC-----------------ARASILLGDYYLAQNQFQSALKNYERILQQDPD-- 253

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQER 256
              E + ++   Y  +A  D A   + LI+  
Sbjct: 254 FISEVIEKIKACY--MAENDLANYELFLIRAN 283


>gi|291230778|ref|XP_002735342.1| PREDICTED: FK506 binding protein 52-like, partial [Saccoglossus
           kowalevskii]
          Length = 388

 Score = 40.9 bits (95), Expect = 0.17,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 53/167 (31%), Gaps = 27/167 (16%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC------SRDFPFAGVAR 94
           ++     +D    ++    +  K   + K  N+ KA + + +        R+       +
Sbjct: 175 KAKESWEMDLDEKMKSSEVIKAKGTEYFKSGNYLKAIKQYKKIVDYLSSERETEMPPETQ 234

Query: 95  K--------SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
           K        + L  A      G+  QA  + ++ +    +++     Y+  G        
Sbjct: 235 KECDKLVLAANLNLAMCYLKIGEEVQAVDVCDKALQIDNKNEKG---YFRRG-------- 283

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
                Q   +L  +    ++E   N+   K     + V +     KE
Sbjct: 284 SARLIQNELQLAAEDFQTVLELEPNNKAAK--NQLILVCKKMKLQKE 328


>gi|78224670|ref|YP_386417.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15]
 gi|78195925|gb|ABB33692.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15]
          Length = 341

 Score = 40.9 bits (95), Expect = 0.17,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 48/181 (26%), Gaps = 55/181 (30%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           I   +    + G     S+                +E+A     + ++  +   + Q   
Sbjct: 46  IGILVTPMLMAGCGHLQSKPT--------------FEEANDLFNQGSYQASLSKYEQIVD 91

Query: 86  DFPFAGVARKSLLMSA--FVQYSAG--KYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
             P      ++L      +         YQ++    +  I  YP              S+
Sbjct: 92  QQP--AAGDRALFEMGIVYSYPKNERKDYQKSLECFQRVIKDYPG-------------SH 136

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-----RFYVTVGRNQLAAKEVEI 196
            +                Q M+  +        VK A     +  +   + +L  KE EI
Sbjct: 137 YRQNS-------------QTMASYINTVP----VKDATIATQQTRIEALQRELTGKEDEI 179

Query: 197 G 197
            
Sbjct: 180 A 180


>gi|325108079|ref|YP_004269147.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces
           brasiliensis DSM 5305]
 gi|324968347|gb|ADY59125.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces
           brasiliensis DSM 5305]
          Length = 693

 Score = 40.9 bits (95), Expect = 0.17,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 67/219 (30%), Gaps = 46/219 (21%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           +F  ++F   +    +  +   S     D  +        +      LK  NF +A + F
Sbjct: 27  RFTSSLFGKKSSDHTLAQDDAESGKATSDKTSLASNSSSPFNAGEAALKAGNFREAKKQF 86

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD----YVYYL 136
            +  +  P    A   L   A        Y  A       +   P++ ++     Y Y L
Sbjct: 87  QKVVQQDPNNATAHHRLAYLAD---MDKDYSIAEIHYLAALRIEPKNADIACDLGYSYLL 143

Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
                          Q  +    +Y+ + +    N  Y K                 + +
Sbjct: 144 ---------------QERSDDSRRYLEKALRFDPNHHYAK-----------------MNL 171

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
              + ++G+Y AA+   +  ++        EEA A + +
Sbjct: 172 ATLHSQQGDYAAAMAMLRQAVSE-------EEAQAHIAQ 203


>gi|301775374|ref|XP_002923098.1| PREDICTED: serine/threonine-protein phosphatase 5-like [Ailuropoda
           melanoleuca]
 gi|281353700|gb|EFB29284.1| hypothetical protein PANDA_012187 [Ailuropoda melanoleuca]
          Length = 499

 Score = 40.9 bits (95), Expect = 0.17,   Method: Composition-based stats.
 Identities = 20/153 (13%), Positives = 45/153 (29%), Gaps = 25/153 (16%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQ 104
              +   ++   E+  +A  + K +++  A ++++Q     P        +SL       
Sbjct: 18  EPPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSL-----AY 72

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
                Y  A +     I       +  Y+  YY    S   +           +  L+  
Sbjct: 73  LRTECYGYALADATRAIEI-----DKKYIKGYYRRAASNMAL--------GKFRAALRDY 119

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
             +V+   +      A+         +  K  E
Sbjct: 120 ETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 149


>gi|254409523|ref|ZP_05023304.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
 gi|196183520|gb|EDX78503.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
          Length = 385

 Score = 40.9 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 17/145 (11%), Positives = 42/145 (28%), Gaps = 42/145 (28%)

Query: 62  EKAVLFLKEQNFSKAYEYF-NQCS-------------------RDFPF--AGVARKSLLM 99
            K +  +K  N+++A + +                          +P       + + L 
Sbjct: 61  NKGMSLIKAGNYAEAVKAYDQAIEINGESADAWMGRGFALYGLEKYPEAVTAFNQATELD 120

Query: 100 ---------SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
                            GK + A +  ++ +   P S   D+ ++  G++  ++      
Sbjct: 121 PSLVGAWVGLGMALDDTGKPEDALAAYDQALKVNPNS---DWAWFHRGITLGRL----ER 173

Query: 151 DQRATKLMLQYMSRIVERYTNSPYV 175
           DQ      L+   + V    +    
Sbjct: 174 DQ----EALEAYDQAVRIDPDYERA 194



 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 64/200 (32%), Gaps = 38/200 (19%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKY 110
           D  Y+R  + +  + ++ + + +A   F +  R  P +          M         + 
Sbjct: 188 DPDYERAWFNRGYILVELERYPEAETSFAEVVRINPNSEPGW-----FMRGLALLEMEQN 242

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A    E  +   PE+ N    +Y  G+    +  D          +     R+V+   
Sbjct: 243 NTALKAFERVLLINPENAN---AWYNKGIILENLDGDDW-------AIFTVFDRVVQLIP 292

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE--HAEE 228
           +      A  +   G   L            +   Y  A+  +  +L    D+E      
Sbjct: 293 D-----DAGGWFKRGNALL------------RLDRYADALNSYDRMLELEPDSEVGWYNR 335

Query: 229 --AMARLVEAYVALALMDEA 246
             A+A L   + A+A  DEA
Sbjct: 336 GIALALLERYHDAIASFDEA 355


>gi|171689182|ref|XP_001909531.1| hypothetical protein [Podospora anserina S mat+]
 gi|170944553|emb|CAP70664.1| unnamed protein product [Podospora anserina S mat+]
          Length = 846

 Score = 40.9 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 46/139 (33%), Gaps = 22/139 (15%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSA 107
             D    +  Y     ++++Q + KAYE + Q        P              + Y  
Sbjct: 245 AADNSDAQSWYLLGRCYMQQQKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQI 298

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +Y+ A       I   P    +  V+Y +G +  +   +   D       L    R  E
Sbjct: 299 NQYRDALDAYSRAIRLNP---FISEVWYDLG-TLYESCNNQIAD------ALDAYQRAAE 348

Query: 168 RYTNSPYVKGARFYVTVGR 186
              N+P+V   +  + + R
Sbjct: 349 LDPNNPHV---KSRLQLLR 364


>gi|325295409|ref|YP_004281923.1| tetratricopeptide repeat domain protein [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065857|gb|ADY73864.1| tetratricopeptide repeat domain protein [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 644

 Score = 40.9 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
               + ++YEK V  L+  ++S A EYF +     P +    K+LLM +   Y  GK
Sbjct: 25  KTEKESKLYEKGVKQLEIGSYSTALEYFLRLLN--PQSKYYEKTLLMLSKTYYGIGK 79


>gi|217978527|ref|YP_002362674.1| peptidase C14 caspase catalytic subunit p20 [Methylocella
           silvestris BL2]
 gi|217503903|gb|ACK51312.1| peptidase C14 caspase catalytic subunit p20 [Methylocella
           silvestris BL2]
          Length = 778

 Score = 40.9 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 31/77 (40%), Gaps = 5/77 (6%)

Query: 59  EVYE-KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           ++Y  +    + +  + +A   +++  R       A K+       +Y   +  +A +  
Sbjct: 132 DLYNSRGAALVNKGEYDRAIADYDKAIRLN--GKFA-KAFYNRGQARYLKNQPDRAIADF 188

Query: 118 EEYITQYPESKNVDYVY 134
           +E+I   P ++   YV 
Sbjct: 189 DEFIKLSP-NEAKGYVQ 204


>gi|307152146|ref|YP_003887530.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822]
 gi|306982374|gb|ADN14255.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822]
          Length = 176

 Score = 40.9 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 51/141 (36%), Gaps = 16/141 (11%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKY 110
           +    +E YE   L+L ++ + ++   F +  +         K+L+     +  Y+  +Y
Sbjct: 48  EKGTAKEYYELGSLYLDKKLYVQSVNLFQKALKADDDIETENKALIYNALGYTYYAQEQY 107

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           + A    +E I  YPE        Y++ ++    + D     +     L+     ++   
Sbjct: 108 ELAIRNYKEAIKLYPE--------YVIALNNLANVYDKK---QMAAKALETYEETLKVDP 156

Query: 171 NSPYVKGARFYVTVGRNQLAA 191
           N+     A+      R +   
Sbjct: 157 NNSL---AKRRAESLRKRFVE 174


>gi|94501051|ref|ZP_01307575.1| hypothetical protein RED65_05329 [Oceanobacter sp. RED65]
 gi|94426798|gb|EAT11782.1| hypothetical protein RED65_05329 [Oceanobacter sp. RED65]
          Length = 914

 Score = 40.9 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 21/172 (12%), Positives = 63/172 (36%), Gaps = 24/172 (13%)

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVG-MSYAQM----IRDVPY-DQRATK----LM 158
             ++A    ++++   P +    +V + +  +    +      DV   DQ+  +      
Sbjct: 29  DTKEAIRRYQQFLQLAPNNDTRVHVMHRLADLKLMDLEEILSEDVEKVDQKQVEAVYDEA 88

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
           +    R+++ + N        + +               + Y  +G+ V+++   Q ++A
Sbjct: 89  ITTYERVLKLFPNRLDSDMLLYQL--------------AKVYSLKGDSVSSLNALQRLVA 134

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
            +  +E   E+  R+ + Y  L   D A    + + ++     +    + ++
Sbjct: 135 RFEKSELLMESYYRMGDIYFTLGQYDNAERSFAKVTQQSSDNRFYLSAQYMM 186


>gi|118346323|ref|XP_977150.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89288407|gb|EAR86395.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 1766

 Score = 40.9 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 51/136 (37%), Gaps = 19/136 (13%)

Query: 44  RDVYLDSVTDVRYQREV---YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
           + + +  + +  Y++E    Y KA     +  F ++ +   +  +  P +       L  
Sbjct: 281 QKINVQQLKEEYYEQEFIDKYNKARNLYSDGRFQESIQLLKEAFKIDPSSYYC----LNL 336

Query: 101 AFVQY-SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
               Y    +Y++A    ++ I  +PE+     VY  +G  Y  +        +  ++ +
Sbjct: 337 IGNNYLENKQYEEAIDYYKKSINIFPEN---AIVYKQLGHCYFNL--------KQYEIAI 385

Query: 160 QYMSRIVERYTNSPYV 175
           + + + +E      + 
Sbjct: 386 ENLKKSIEYNPEYSHA 401


>gi|145478081|ref|XP_001425063.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124392131|emb|CAK57665.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1339

 Score = 40.9 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 60/192 (31%), Gaps = 29/192 (15%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
            Y   +Y K V       +  A   FN+  +  P     + + +       +  K+ +A 
Sbjct: 477 DYADGLYNKGVALCNLNQYEDAIRQFNKAIQLKPKNEC-KFAFINRGICLKNLKKFNEAI 535

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
              +E I    +  +V+ +YY  G    ++ +         +  +Q   + ++    S Y
Sbjct: 536 QNYDEAIQL-SQGTDVEDIYYFKGNCLLELNK--------YEDAIQLYDQAIQL--ESVY 584

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
              A F   +               Y     +  AI  +Q  +   S    A      L 
Sbjct: 585 SSSANFQKGIA--------------YTNLKHFDDAIQSYQHAIEQNSQNSWAY---FNLG 627

Query: 235 EAYVALALMDEA 246
             Y  L   ++A
Sbjct: 628 ITYYNLENYEQA 639


>gi|124024108|ref|YP_001018415.1| hypothetical protein P9303_24171 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964394|gb|ABM79150.1| Hypothetical protein P9303_24171 [Prochlorococcus marinus str. MIT
           9303]
          Length = 733

 Score = 40.9 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 31/109 (28%), Gaps = 31/109 (28%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFP------FAGVARKSLLMSAFV 103
              +    Y    ++L + N   A  +F +      ++P         +  K  L +A  
Sbjct: 282 KTDFPEVYYNLGSIYLDQGNIETAINFFKKALILKENYPEALNNLGNSLQEKGELDAAIA 341

Query: 104 QYS----------------------AGKYQQAASLGEEYITQYPESKNV 130
            Y                        G  + +  + ++ +  +P+   +
Sbjct: 342 AYKKALNHKPSYREAQNNLGCVYRAQGDLENSIRIFKKALALHPDHPEI 390


>gi|227820344|ref|YP_002824315.1| TonB-dependent receptor [Sinorhizobium fredii NGR234]
 gi|227339343|gb|ACP23562.1| putative exported protein, TonB-dependent receptor protein
           [Sinorhizobium fredii NGR234]
          Length = 1198

 Score = 40.9 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 31/102 (30%), Gaps = 16/102 (15%)

Query: 101 AFVQYSAG---KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
           A   Y A      + A +  +  +   P S  +              I  V  D+   + 
Sbjct: 412 ARAHYRADIENDLEGALADLQRALETAPGSPTI-----------WNAIGIVQGDRGDNRA 460

Query: 158 MLQYMSRIVERYTNSP--YVKGARFYVTVGRNQLAAKEVEIG 197
             +   + +E     P  +   A  Y+   R   A +E++  
Sbjct: 461 AERAFKKAIELDPADPNYHANLAIQYLGELRVAEAKREIDAA 502



 Score = 39.3 bits (91), Expect = 0.64,   Method: Composition-based stats.
 Identities = 16/96 (16%), Positives = 30/96 (31%), Gaps = 9/96 (9%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
           ++ R++      D  +   +  +    L+  +  KA E     S   P    A  + ++ 
Sbjct: 494 EAKREIDAALAVDPSFDIVLVARGWYQLQNGDVEKAVEDLLAGSTANP--AFAG-AQMLL 550

Query: 101 AFVQYSAGKY---QQAASLGEEYITQYPESKNVDYV 133
           A   Y  G +    QA    +      P    V   
Sbjct: 551 AAAYYEKGDHGPAAQALDSADR---LDPNDPVVPMA 583


>gi|300775931|ref|ZP_07085791.1| possible TPR repeat-containing protein [Chryseobacterium gleum ATCC
           35910]
 gi|300505481|gb|EFK36619.1| possible TPR repeat-containing protein [Chryseobacterium gleum ATCC
           35910]
          Length = 550

 Score = 40.9 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 53/171 (30%), Gaps = 28/171 (16%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE----------VYEKAVLFLKEQNFSKAY 77
             +A     G   Q+  D    + T    +++          +++ A  +   +N++ A 
Sbjct: 390 LELANIAGGGGASQAEADKGPTNPTIEALKKQVAANSQDSDALFKLATAYQNAKNWNGAI 449

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ-YPESKNV-----D 131
             + + S   P    A  +     +    AG  + A    E++I+   P  +        
Sbjct: 450 LTWQKMSALLP--DWAP-AYYSQGYSYQQAGNNEAAKLAYEKFISTVKPADQEANKQTLA 506

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
           Y Y+   ++Y     D             Y+++ ++              +
Sbjct: 507 YAYF--AVAYMSKDSDPA-------KAKDYVAKSLQLDPTYQDAVKLNAEI 548


>gi|207109110|ref|ZP_03243272.1| hypothetical protein HpylH_07281 [Helicobacter pylori
           HPKX_438_CA4C1]
          Length = 103

 Score = 40.9 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 27/79 (34%), Gaps = 4/79 (5%)

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE--IG 197
           S+    ++   DQ      +  +   +E+Y NS Y     +     +  L   E+   I 
Sbjct: 3   SHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYM--QIKFILGQNELNRAIA 60

Query: 198 RYYLKRGEYVAAIPRFQLV 216
             Y KR +        + +
Sbjct: 61  NVYKKRHKPEGVKRYLERI 79


>gi|119181833|ref|XP_001242098.1| hypothetical protein CIMG_05994 [Coccidioides immitis RS]
          Length = 478

 Score = 40.9 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 30/232 (12%), Positives = 71/232 (30%), Gaps = 54/232 (23%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF---PFAGVARKSLLMSAFVQYSAG 108
            ++     +         + ++ +A  ++ +    +   P +    ++            
Sbjct: 4   AEIEAATALKVAGNKAFAKHDWPEALGFYTKAIEKYDRDP-SFWCNRAQ-----ANIKLE 57

Query: 109 KYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
            Y  A +   + I   P      Y   Y+   ++   ++          +  L+    +V
Sbjct: 58  AYGYAIADATKAIELDPS-----YVKAYWRRAVANTAILNS--------REALKDFKTVV 104

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
            +  N      A+  +                  ++R E+  AI   +           A
Sbjct: 105 RKAPNDR---DAKLKLAECEKL------------VRRIEFEKAIEVAE--------PPSA 141

Query: 227 EEAMAR----LVEAYVALALMDE-AREVVSLIQERYPQGYW--ARYVETLVK 271
            E +      + E+Y  + L DE  +E +  + ER+  G     +Y   +VK
Sbjct: 142 FEGLDIEAIKVEESYDGVHLGDEMTQEFIDDMIERFKNGKKIHKKYAYKIVK 193


>gi|325474465|gb|EGC77652.1| TPR domain-containing protein [Treponema denticola F0402]
          Length = 415

 Score = 40.9 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 33/264 (12%), Positives = 73/264 (27%), Gaps = 54/264 (20%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
           S +++    +      E+ ++A   LK  + ++A   F +     P       +L+    
Sbjct: 46  SDEIFSPEDSKQVEISELSKQAYSLLKGNSITEAINVFKKILELDPTNNY---ALVGLGD 102

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY--AQMIR-------------- 146
            +    K+ +A    ++ +  +P +    Y  + +   Y                     
Sbjct: 103 AERKNNKFNEAIKFYKQCLEHHPSNN---YALFGLADCYKSMNQFPRAIAIWEEYLKFDD 159

Query: 147 ----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV----GRNQLAAK 192
                     D     +  +   +   +++E+   + Y      ++       R  L   
Sbjct: 160 KNITVLTRVADAYRKTKEFEKAEKLYQKVLEKSPKNAYALIGLGHLNYDFKKYREALVYW 219

Query: 193 E---------------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           E                 IG  Y K   +   +  F+  L    D  +    +  L + Y
Sbjct: 220 EKVMESSGELVDIRILTSIGNCYRKMKLFDRGVYYFERALERSPDNFY---GLFGLADCY 276

Query: 238 VALALMDEAREVVSLIQERYPQGY 261
             L     +      I E  P   
Sbjct: 277 RGLNQQYNSIVYWKKILELDPNNK 300


>gi|312129845|ref|YP_003997185.1| tetratricopeptide tpr_1 repeat-containing protein [Leadbetterella
           byssophila DSM 17132]
 gi|311906391|gb|ADQ16832.1| Tetratricopeptide TPR_1 repeat-containing protein [Leadbetterella
           byssophila DSM 17132]
          Length = 712

 Score = 40.9 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 65/169 (38%), Gaps = 17/169 (10%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
                ++A    ++++ Q+P+S     V Y + +S +  +++            QY  R+
Sbjct: 553 KFRDEKKADESFKQFLEQFPKSSYEPEVLYFLALSQSNPLQN------------QYAQRL 600

Query: 166 VERYTNSPYVKGARF---YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
           ++ Y  + + +  R     +T  R   A +  +      + G+   A+   +  +  Y  
Sbjct: 601 LKEYPMTSFGRQMRKGSVVMTQDREVAAQRIYQTAYNLYESGKMEEALKTLEEGMNEYVG 660

Query: 223 AEHAEEAMARL-VEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
           + H E+ MA L + A   L   DE +  ++     YP          ++
Sbjct: 661 S-HLEDKMALLRIYALAKLGAKDEYQIALTDFVRSYPSSELLNKAREML 708



 Score = 38.9 bits (90), Expect = 0.69,   Method: Composition-based stats.
 Identities = 9/73 (12%), Positives = 27/73 (36%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
             + +Y+ A    +     +A +   +   ++  + +  K  L+  +     G   +   
Sbjct: 627 AAQRIYQTAYNLYESGKMEEALKTLEEGMNEYVGSHLEDKMALLRIYALAKLGAKDEYQI 686

Query: 116 LGEEYITQYPESK 128
              +++  YP S+
Sbjct: 687 ALTDFVRSYPSSE 699


>gi|282881718|ref|ZP_06290381.1| tetratricopeptide repeat protein [Prevotella timonensis CRIS 5C-B1]
 gi|281304477|gb|EFA96574.1| tetratricopeptide repeat protein [Prevotella timonensis CRIS 5C-B1]
          Length = 656

 Score = 40.9 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 27/249 (10%), Positives = 74/249 (29%), Gaps = 63/249 (25%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYE-KAVLFLKEQNFSKAYEYFNQCSRDFPF 89
           A+C +   +   ++      +         Y  KA ++L +++ + A ++ ++  +  P+
Sbjct: 132 AICLMNDKQYAKAQLQTDTIIHKWSQNANAYTLKAEIYLHQKDTTSAAKWLDKSLKVDPY 191

Query: 90  --AGVARKSLLMSAFVQYSAGKYQQ-----------------------------AASLGE 118
             +    ++ +  A  Q+     +                              A S  +
Sbjct: 192 DGSTWTMRAYISLARQQWKEADKELSQAIHLKPNQANNYVNRALARLNYNNLRGAMSDYD 251

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
             +   P+       +Y  G+   Q+  D           ++    +++    +      
Sbjct: 252 MALDLNPQDFL---AHYNRGLLRMQLGDD--------NRAIEDFDFVIKLEPKN------ 294

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
              V    N+             + G   AAI  +  V+  + +       ++     Y 
Sbjct: 295 ---VMAIFNR--------ALLLDRTGNLRAAIRDYSAVIEQFPN---FWTGLSYRAHCYR 340

Query: 239 ALALMDEAR 247
            L ++ +A 
Sbjct: 341 RLGMIAKAE 349


>gi|262199637|ref|YP_003270846.1| hypothetical protein Hoch_6484 [Haliangium ochraceum DSM 14365]
 gi|262082984|gb|ACY18953.1| Tetratricopeptide TPR_2 repeat protein [Haliangium ochraceum DSM
            14365]
          Length = 1257

 Score = 40.9 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 58/187 (31%), Gaps = 31/187 (16%)

Query: 53   DVRYQREVYEKAVLFLKEQNFSKAYEYFN----QCSRDFPFAGVARKSLLMSAFVQYSAG 108
                  +     +L + ++ F  A E F+                 ++ +++    + A 
Sbjct: 1094 GTSPASQHLAAGLLAMAKREFDTAQERFDQAVAALEEAQATPRQFARAHILAGRALFQAD 1153

Query: 109  KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
            + + A+   E  I   P        Y+++GM        V Y +   +         +ER
Sbjct: 1154 ELRDASKALERAIRLDPADPE---PYFVLGM--------VEYGRGEYEAAADAFEASLER 1202

Query: 169  YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
              +S     A                 +G   L+R +   A   F+  L    D   AE+
Sbjct: 1203 --DSESTPKAW--------------FYLGEVELERKKERDAKKAFRAFLERVDDGPEAEQ 1246

Query: 229  AMARLVE 235
            A   L E
Sbjct: 1247 AQRYLRE 1253


>gi|167824071|ref|ZP_02455542.1| hypothetical protein Bpseu9_10360 [Burkholderia pseudomallei 9]
          Length = 1240

 Score = 40.9 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 50/192 (26%), Gaps = 40/192 (20%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           +A L L   +F +A   F +     P    A +S         +  +   A +  +  + 
Sbjct: 695 RAELALDTGDFDEALSQFERLREQRP---DAPESYANLIPALAALERRDDAIAALQRALE 751

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
              +            ++                          ++Y             
Sbjct: 752 LNSKHPG--------ALNNGVQ-----------------FYLRTQQY---DKAMELAQRY 783

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEY---VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                +LA+     G  Y     Y    A++ R   +        H  EA+  L      
Sbjct: 784 VGAHGELASAHTMCGLVYHNLKAYDRAEASLRRALEIE------PHNAEALFALGTVLER 837

Query: 240 LALMDEAREVVS 251
           +  + E+ EV+ 
Sbjct: 838 VDRLAESEEVLR 849


>gi|110738736|dbj|BAF01292.1| putative O-GlcNAc transferase [Arabidopsis thaliana]
          Length = 808

 Score = 40.9 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 51/158 (32%), Gaps = 17/158 (10%)

Query: 14  AWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF 73
            WAY L +  + +  ++    +V    +  R+  +   T  R  + +            +
Sbjct: 304 QWAYLLPQIYVNLGIALEGEGMVLSACEYYREAAILCPTHFRALKLL---GSALFGVGEY 360

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
             A +        +     A  +    A   +S G+ ++A  + +  I   P   +    
Sbjct: 361 RAAVKALE--EAIYLKPDYA-DAHCDLASSLHSMGEDERAIEVFQRAIDLKPGHVD---A 414

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            Y +G  Y         D    +   +  +R++  + N
Sbjct: 415 LYNLGGLYM--------DLGRFQRASEMYTRVLTVWPN 444


>gi|84994186|ref|XP_951815.1| cyclophilin [Theileria annulata strain Ankara]
 gi|65301976|emb|CAI74083.1| cyclophilin, putative [Theileria annulata]
          Length = 384

 Score = 40.9 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 11/144 (7%), Positives = 43/144 (29%), Gaps = 30/144 (20%)

Query: 63  KAVLFLKEQNFSKAYE-YFNQCSRDFPFAGVARKSL-----------LMSAFVQYSAGKY 110
                  + N+  A   Y          +    +S+           L  +       ++
Sbjct: 66  DGNNKFSQGNYRGAISMYLEGLEYLSESSEWPDESMKLANTTKLQCYLNLSNCYLKVSEF 125

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMS--YAQMIRDVPYDQRATKLMLQYMSRIVER 168
           + A     E +    ++ N+    +   ++     ++             ++ ++ +++ 
Sbjct: 126 RDAEKNASEALKL--DNHNIK-ALFRRALARLNYDILDG----------AIEDLNSLLKL 172

Query: 169 YTNSPYVKGARFYVTVGRNQLAAK 192
             N+      + Y+ + + + A+ 
Sbjct: 173 DPNN---LDGQKYLKLAKQKQASY 193


>gi|15220436|ref|NP_172007.1| calcium-binding EF hand family protein [Arabidopsis thaliana]
 gi|75318061|sp|O23052|Y1515_ARATH RecName: Full=Uncharacterized TPR repeat-containing protein
           At1g05150
 gi|2388582|gb|AAB71463.1| Contains similarity to Rattus O-GlcNAc transferase (gb|U76557)
           [Arabidopsis thaliana]
 gi|332189674|gb|AEE27795.1| Calcium-binding tetratricopeptide family protein [Arabidopsis
           thaliana]
          Length = 808

 Score = 40.9 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 51/158 (32%), Gaps = 17/158 (10%)

Query: 14  AWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF 73
            WAY L +  + +  ++    +V    +  R+  +   T  R  + +            +
Sbjct: 304 QWAYLLPQIYVNLGIALEGEGMVLSACEYYREAAILCPTHFRALKLL---GSALFGVGEY 360

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
             A +        +     A  +    A   +S G+ ++A  + +  I   P   +    
Sbjct: 361 RAAVKALE--EAIYLKPDYA-DAHCDLASSLHSMGEDERAIEVFQRAIDLKPGHVD---A 414

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            Y +G  Y         D    +   +  +R++  + N
Sbjct: 415 LYNLGGLYM--------DLGRFQRASEMYTRVLTVWPN 444


>gi|307254553|ref|ZP_07536387.1| hypothetical protein appser9_7990 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306862490|gb|EFM94450.1| hypothetical protein appser9_7990 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
          Length = 338

 Score = 40.9 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 82/212 (38%), Gaps = 34/212 (16%)

Query: 48  LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           LD+  D   ++++  K   A  F+    + +A  Y+     +      A  SL     V 
Sbjct: 43  LDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDE---PEFAVNSLTQLMTVY 99

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
               ++++A ++ E+ I   P++  +   +Y     YAQ I++   D       L  +S+
Sbjct: 100 QKTKEWKKAINVAEKLIKIEPDTDKIPLSHYY--CEYAQAIKNEDLDGH-----LSALSK 152

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
            +E                      A   + +G YYL + ++ +A+  ++ +L    D  
Sbjct: 153 TLEYSPQC-----------------ARASILLGDYYLAQNQFQSALKNYEHILQQDPD-- 193

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQER 256
              E + ++   Y  +A  D A   + LI+  
Sbjct: 194 FISEVIEKIKACY--MAENDLANYELFLIRAN 223


>gi|157737822|ref|YP_001490506.1| hypothetical protein Abu_1588 [Arcobacter butzleri RM4018]
 gi|157699676|gb|ABV67836.1| conserved hypothetical protein [Arcobacter butzleri RM4018]
          Length = 314

 Score = 40.9 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 41/144 (28%), Gaps = 27/144 (18%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC--------SRDFPFAGVARKSLLMSA 101
            V     + ++  +A      + ++ A   + +           +F    +         
Sbjct: 190 EVKTAEDKAKLMSEAKKDYDAKAYTTAIPKYEKLIEVNYKPAENNFYLGEM--------- 240

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
              Y   KY  A S  ++           D   Y+  +     I       +  +    +
Sbjct: 241 --WYKRKKYDTAISHFKKSAMLN------DKAAYMPTLLLHSAISFEN--VKDKENAKSF 290

Query: 162 MSRIVERYTNSPYVKGARFYVTVG 185
              ++E Y NS   K A+  ++  
Sbjct: 291 YGTLIELYPNSSEAKEAKTKLSKL 314


>gi|289643933|ref|ZP_06476036.1| Tetratricopeptide domain protein [Frankia symbiont of Datisca
           glomerata]
 gi|289506262|gb|EFD27258.1| Tetratricopeptide domain protein [Frankia symbiont of Datisca
           glomerata]
          Length = 216

 Score = 40.9 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 46/131 (35%), Gaps = 20/131 (15%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y + V  L   N + A +         P +   R++    A  Q+ AG+Y  A    E +
Sbjct: 97  YTRGVALLDRGNANAAVQLLAHAVAAEPGSRSVREA---LARAQFDAGQYGAAR---ESF 150

Query: 121 --ITQY-PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
             I  + P     DY  + +GM+               +  +++++  V    +  +   
Sbjct: 151 AWIVAHDPTD---DYAQFGLGMA--------ARRTGDLRAAVEHLALAVAMRPDLGHYGQ 199

Query: 178 ARFYVTVGRNQ 188
           A   V    N+
Sbjct: 200 ALRGVRAALNR 210


>gi|126325275|ref|XP_001366322.1| PREDICTED: similar to ubiquitously transcribed tetratricopeptide
           repeat, X chromosome isoform 1 [Monodelphis domestica]
          Length = 1400

 Score = 40.9 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 23/196 (11%), Positives = 49/196 (25%), Gaps = 54/196 (27%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A +  ++  
Sbjct: 105 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 151

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198
             ++    +    K     + +                LA              +  I  
Sbjct: 152 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFHLALVDCNPCTLSNAEIQFHIAH 211

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEA-----MARLVEAYVALALMDEAREVV-SL 252
            Y  + +Y +A   ++ +L    +     +A     +  +      L             
Sbjct: 212 LYETQRKYHSAKEAYEQLLQT-ENLPAQVKATVLQQLGWMHHTVDQLGDKATKESYAIQY 270

Query: 253 IQERY---PQG--YWA 263
           +Q+     P     W 
Sbjct: 271 LQKSLEADPNSGQSWY 286


>gi|126325277|ref|XP_001366383.1| PREDICTED: similar to ubiquitously transcribed tetratricopeptide
           repeat, X chromosome isoform 2 [Monodelphis domestica]
          Length = 1223

 Score = 40.9 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 23/196 (11%), Positives = 49/196 (25%), Gaps = 54/196 (27%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A +  ++  
Sbjct: 105 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 151

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198
             ++    +    K     + +                LA              +  I  
Sbjct: 152 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFHLALVDCNPCTLSNAEIQFHIAH 211

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEA-----MARLVEAYVALALMDEAREVV-SL 252
            Y  + +Y +A   ++ +L    +     +A     +  +      L             
Sbjct: 212 LYETQRKYHSAKEAYEQLLQT-ENLPAQVKATVLQQLGWMHHTVDQLGDKATKESYAIQY 270

Query: 253 IQERY---PQG--YWA 263
           +Q+     P     W 
Sbjct: 271 LQKSLEADPNSGQSWY 286


>gi|75909260|ref|YP_323556.1| lytic transglycosylase catalytic subunit [Anabaena variabilis ATCC
           29413]
 gi|75702985|gb|ABA22661.1| Lytic transglycosylase, catalytic [Anabaena variabilis ATCC 29413]
          Length = 731

 Score = 40.9 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 75/217 (34%), Gaps = 28/217 (12%)

Query: 55  RYQREVYEKAVL-FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
           +  R +Y  A    +  +N  +A   + Q  + FP A      L+  A         + A
Sbjct: 259 KTARNLYRTARGWQVGGKNREQAISTYKQLVQQFPDARETGLGLVRLAE---MTKTNKDA 315

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
                + I ++PE  +         +     I     D++A +   Q   +++ +Y  S 
Sbjct: 316 LPYLNQVIAKFPEQAS-------QALVKKAEILTALKDEKAAQQTWQ---QLITKYAKSD 365

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
                R+      N L            K  +Y +A    Q ++ N  ++  A  A   L
Sbjct: 366 EAAEYRWK-----NALEK---------AKARDYTSAWKWAQPIVINNPNSILAPRAGFWL 411

Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
            +   A+    EA+     +  ++P  Y+A     L+
Sbjct: 412 GKWAAAVGKQQEAQTAYEYVISQFPYSYYAWRSANLL 448


>gi|299140495|ref|ZP_07033633.1| hypothetical protein HMPREF0665_00042 [Prevotella oris C735]
 gi|298577461|gb|EFI49329.1| hypothetical protein HMPREF0665_00042 [Prevotella oris C735]
          Length = 348

 Score = 40.9 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 43/141 (30%), Gaps = 26/141 (18%)

Query: 61  YEKAVLFLKEQNFSKAYEY-----FNQCSRDFPFAGVARKSLLMSAFVQ-YS----AGKY 110
           Y  A +  ++  +  A +             F     A K  + S     +        +
Sbjct: 84  YRDAQVSKEQSEYEYAMKSADPAVLQAYLDTF---TDAPKVHVDSIQAHLFMLQQGDKDW 140

Query: 111 QQAA-----SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
             A      SL E YI  +P+S +     +         I  + +   +T   L   +  
Sbjct: 141 TNALVSNSKSLLEAYIANHPDSPHKAEAEH--------KIDSIDWANVSTTNTLDAYNTY 192

Query: 166 VERYTNSPYVKGARFYVTVGR 186
           ++ + N  +V  A+  +    
Sbjct: 193 LQDHPNGEHVDEAKDGIKSLN 213


>gi|260592657|ref|ZP_05858115.1| putative TPR domain protein [Prevotella veroralis F0319]
 gi|260535427|gb|EEX18044.1| putative TPR domain protein [Prevotella veroralis F0319]
          Length = 1133

 Score = 40.9 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 60/174 (34%), Gaps = 32/174 (18%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA---------- 93
            D Y D          +Y   +L++++     A  Y  + SR +P +             
Sbjct: 626 SDNYPDYEAMDDVYYHLY---LLYMRKNEPEIAETYLTKLSRQYPKSKWTTLLTDPYYKQ 682

Query: 94  --------RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
                     SL  S +  +  G+Y + A+  +    ++P   N D   ++ G+S     
Sbjct: 683 NLRFGVQIEDSLYASTYDAFKQGRYNEVANNAQISEKRFPMGANRDKFLFIGGLSKLNT- 741

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
                        L  M  +V++Y NS   + A     +     A K++  G++
Sbjct: 742 -------GDANGCLTDMKEVVKKYPNSRISEMAG---MIVNGVQAGKKLRSGKF 785



 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 22/54 (40%)

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           A    + V  NY D E  ++    L   Y+     + A   ++ +  +YP+  W
Sbjct: 618 AERALRRVSDNYPDYEAMDDVYYHLYLLYMRKNEPEIAETYLTKLSRQYPKSKW 671



 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 1/63 (1%)

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV-VSLIQE 255
             YYL  GE   A+P  Q V+ +    +     +  L + Y AL    +A E    +I+ 
Sbjct: 221 ADYYLHTGELAKAVPYLQKVIKHEMRQKQKARELYLLGQVYAALGKRQDAYEAFQRVIRT 280

Query: 256 RYP 258
             P
Sbjct: 281 NPP 283


>gi|119953321|ref|YP_945530.1| tetratricopeptide repeat family protein [Borrelia turicatae 91E135]
 gi|119862092|gb|AAX17860.1| tetratricopeptide repeat family protein [Borrelia turicatae 91E135]
          Length = 217

 Score = 40.9 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 26/67 (38%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              +  +  +  A ++F +     P      K  +++A   Y   +Y +A    E  +  
Sbjct: 103 GEAYFFQGQYKNALKHFQKYIGLEPNGARIAKVYILTADSFYKLERYNEADFAYENALRF 162

Query: 124 YPESKNV 130
            P ++N+
Sbjct: 163 LPNNQNI 169


>gi|121712788|ref|XP_001274005.1| serine/threonine protein phosphatase PPT1 [Aspergillus clavatus
           NRRL 1]
 gi|119402158|gb|EAW12579.1| serine/threonine protein phosphatase PPT1 [Aspergillus clavatus
           NRRL 1]
          Length = 478

 Score = 40.9 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 16/149 (10%), Positives = 46/149 (30%), Gaps = 27/149 (18%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF---PFAGVARKSLLMSAFVQYSAG 108
           +D+     +  +      +  +  A +++ Q    +   P +  + ++            
Sbjct: 4   SDIEAATALKVQGNKAFAQHEWPAAVDFYTQAIAKYDREP-SFFSNRAQ-----AHIKLE 57

Query: 109 KYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
            Y  A +   + +   P      Y   Y+   ++   ++          +  L+    +V
Sbjct: 58  AYGFAIADATKALELDP-----AYVKAYWRRALANTAILN--------YRDALKDFKAVV 104

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           +R  N+     A+  +      +   E E
Sbjct: 105 KREPNNR---DAKLKLADCEKLVRRIEFE 130


>gi|89092495|ref|ZP_01165448.1| hypothetical protein MED92_14353 [Oceanospirillum sp. MED92]
 gi|89083007|gb|EAR62226.1| hypothetical protein MED92_14353 [Oceanospirillum sp. MED92]
          Length = 422

 Score = 40.9 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 11/74 (14%), Positives = 27/74 (36%), Gaps = 3/74 (4%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
           V      +     + +++ +   +  +   A E F     + P +    ++ L  A    
Sbjct: 22  VVTAETNEEFDPEKFFKQGMEEREAGSPYNAIESFQTILSNQP-SLH--RARLELAVAYM 78

Query: 106 SAGKYQQAASLGEE 119
              +YQ+A +  +E
Sbjct: 79  QTLQYQEAEAQAQE 92


>gi|298387954|ref|ZP_06997503.1| TPR domain-containing protein [Bacteroides sp. 1_1_14]
 gi|298259361|gb|EFI02236.1| TPR domain-containing protein [Bacteroides sp. 1_1_14]
          Length = 584

 Score = 40.9 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 65/199 (32%), Gaps = 38/199 (19%)

Query: 61  YEKAVLFL--KEQNFSKAYEYFNQCSRDFPFAGVARK-SLLMSAFVQYSAGKYQQAASLG 117
           Y + +  L  ++    KA     Q    FP    A++  L     +     KY +  S  
Sbjct: 116 YSQGLASLYQQQNELDKAVTLLEQMVVRFP----AKQDPLFNLLDLYGRQEKYDEVISTL 171

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
                +  +++ +    + +   Y QM  D        K   Q +  +V+ Y        
Sbjct: 172 NRLEKRMGKNEQLSMEKFRI---YLQMKDD--------KKAFQEIESLVQEYP------- 213

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
               + +        +V +G  YL+ G+   A   +Q VLA   D      A+  +   Y
Sbjct: 214 ----MDM------RYQVILGDVYLQNGKKQEAYDVYQKVLAAEPD---NPMAIFSMASYY 260

Query: 238 VALALMDEAREVVSLIQER 256
                 +  ++ +  +   
Sbjct: 261 KQTGQEELYQQQLDTLLLN 279


>gi|209527011|ref|ZP_03275527.1| protein of unknown function DUF268 [Arthrospira maxima CS-328]
 gi|209492522|gb|EDZ92861.1| protein of unknown function DUF268 [Arthrospira maxima CS-328]
          Length = 1345

 Score = 40.9 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 9/75 (12%), Positives = 25/75 (33%), Gaps = 17/75 (22%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK-------YQQA 113
           +++    L+     +A + F +    +P    +           Y  G+        ++A
Sbjct: 5   FDRGNQLLQSGKLEEAVDAFQKAIAHYPHFHWS----------HYKLGEALEQLGRLEEA 54

Query: 114 ASLGEEYITQYPESK 128
            +  ++ +   P S 
Sbjct: 55  KAAFQKALEINPNSP 69


>gi|254410950|ref|ZP_05024728.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
 gi|196182305|gb|EDX77291.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
          Length = 799

 Score = 40.9 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 71/229 (31%), Gaps = 36/229 (15%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
           V  E   S  +     +D       + +        +F  A   +++  +  P       
Sbjct: 138 VSAETSLSDSISSIENSDSEQAEVWFNRGNQQFDAGDFLGAIANYDKALQFKPDNHY--- 194

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPE-SKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           +  M        GKY++A +  ++ +   P+  +     +Y  G++ A        D   
Sbjct: 195 AWFMRGVALADLGKYEEAIANYDKALQIQPDFHQ----AWYNRGVALA--------DLGE 242

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY-------------YL 201
            +  +    + ++   +      A +   V    L   E  I  Y             + 
Sbjct: 243 YEEAIANYDKALQIQPD---FHQAWYNRGVALADLGEYEEAIANYDKALQIQPDKHEAWY 299

Query: 202 KRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEA 246
            RG  +  + +++  +ANY  A        +A      A   L   +EA
Sbjct: 300 NRGVALGNLGKYEEAIANYDKALQIQPDFHQAWFMRGVALADLGEYEEA 348



 Score = 40.1 bits (93), Expect = 0.37,   Method: Composition-based stats.
 Identities = 14/112 (12%), Positives = 40/112 (35%), Gaps = 16/112 (14%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y + V       + +A   +++  +  P F     ++  M        G+Y++A +  ++
Sbjct: 299 YNRGVALGNLGKYEEAIANYDKALQIQPDF----HQAWFMRGVALADLGEYEEAIANYDK 354

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            +   P   +  Y +   G++ A        D    +  +    + ++   +
Sbjct: 355 ALQFKP---DFHYAWNNRGVALA--------DLGKYEEAIASFDKALQIKPD 395


>gi|154147891|ref|YP_001406275.1| TPR repeat-containing protein [Campylobacter hominis ATCC BAA-381]
 gi|153803900|gb|ABS50907.1| TPR repeat-containing protein [Campylobacter hominis ATCC BAA-381]
          Length = 272

 Score = 40.9 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 39/116 (33%), Gaps = 2/116 (1%)

Query: 155 TKLMLQYMSRIVERYTNSPY--VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           +K   + +    + Y+   Y   K    Y+     Q A     +G        Y  AI  
Sbjct: 155 SKKETEILKEAEKLYSKKDYSGAKECYEYLVSKNYQPAKSNFMLGEISYFGKSYGEAIKY 214

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           +Q  +++     +  + +     ++  +   + A +  + ++  YP    A+    
Sbjct: 215 YQTSISHSQTQPYTPKLLYHTAISFDKIGDTNSANKFYNALKSAYPDSKEAKSSPN 270



 Score = 39.3 bits (91), Expect = 0.53,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 44/128 (34%), Gaps = 11/128 (8%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
            + + E+ ++A     ++++S A E +        +     KS  M   + Y    Y +A
Sbjct: 155 SKKETEILKEAEKLYSKKDYSGAKECYEYLVSKN-YQP--AKSNFMLGEISYFGKSYGEA 211

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
               +  I+          + Y   +S+ ++          T    ++ + +   Y +S 
Sbjct: 212 IKYYQTSISHSQTQPYTPKLLYHTAISFDKI--------GDTNSANKFYNALKSAYPDSK 263

Query: 174 YVKGARFY 181
             K +   
Sbjct: 264 EAKSSPNR 271


>gi|56695232|ref|YP_165580.1| TPR domain-containing protein [Ruegeria pomeroyi DSS-3]
 gi|56676969|gb|AAV93635.1| TPR domain protein [Ruegeria pomeroyi DSS-3]
          Length = 611

 Score = 40.9 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 56/163 (34%), Gaps = 34/163 (20%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           +A    +      A E   + ++D+P      ++ +    +Q     Y +AA+  ++ + 
Sbjct: 372 RAEALRRSAKPDAAIEVLEKLAKDYPSQP---QAFVALGDLQRQQEAYDRAATAYDKALQ 428

Query: 123 Q-YPESKNVDYVYYLVGMSY------------AQMIRDVPYD---------------QRA 154
              P + N+ +++Y  G+ +             +   ++  D               Q  
Sbjct: 429 LTDPGAPNMWFLHYARGICHERLGNWPGAEADFRAALELNPDQPQVLNYLGYSLVEKQEK 488

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
               L  + R V    +S Y+  +  +V     +L   +  +G
Sbjct: 489 LDEALDLIERAVAARPDSGYIVDSLGWVLF---RLGRYDEAVG 528


>gi|78216475|gb|ABB36656.1| p50 immunophilin [Schistosoma japonicum]
          Length = 424

 Score = 40.9 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 51/151 (33%), Gaps = 26/151 (17%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF----AGVARK--------SLL 98
              + Y   + EKA  FLK+  F  A E + +   +  +        +K          L
Sbjct: 246 PKRIGYAITLKEKANNFLKDSKFDSAIELYKRLDDELQYVVANGPTEQKELSGVTVAVQL 305

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
             A V     K  +     ++ +  + +++      + +G ++           +  +  
Sbjct: 306 NLALVYLKLCKPDKCIEFCKKVLDNFSDNEK---ALFRIGQAHLLR--------KDHEEA 354

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
           + Y  RIV +  N+     A   V +   ++
Sbjct: 355 VVYFKRIVTKNPNN---ASAVKQVQICEEEI 382


>gi|116620862|ref|YP_823018.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116224024|gb|ABJ82733.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 388

 Score = 40.9 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 58/179 (32%), Gaps = 30/179 (16%)

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           ++        + AG+   AA   +  I  +  S +  Y  YL    Y++           
Sbjct: 121 QAQADLGSALFDAGELAVAAEHLDRAIQIFGRSGDAAYPRYLRAKIYSER--------GE 172

Query: 155 TKLMLQYMSRIVERYTN-----SPYVKGARFYVTVGRNQLAAKEVEI------------- 196
            +     +S+ V    +     S   +  +  +      LAA +  +             
Sbjct: 173 NEKAAADLSQAVALRPDFAEAWSDLGQTCKLRMDDA-GALAAFQRAVMLSPDDGVAQTRL 231

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           G  YL +G+   A+P  Q       +    + A+  L  A      + EA+EV   + E
Sbjct: 232 GAEYLSQGKAHEAVPHLQEATRLNPE---NQTALYSLQSALRDDGRIAEAQEVKERLVE 287


>gi|91202019|emb|CAJ75079.1| conserved hypothetical protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 236

 Score = 40.9 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 62/189 (32%), Gaps = 34/189 (17%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           + VLF  +    +A +Y+ +     P+    R +    A V +  G+  +A    +  + 
Sbjct: 35  QGVLFDSQGKLDEAMQYYKKALSIDPYN---RDAHCNIATVYHKKGQLNKALEEYKIVLE 91

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
            YP    +    Y VG   A   R+   D       + +  + VE   +           
Sbjct: 92  LYPYDPQI---LYNVG---AIQARNNNQD-----NAIAFWEKAVELKPDFTE-------- 132

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
                  A   + I   Y ++  +  AI  ++ VL    D          L  AY     
Sbjct: 133 -------AQYALGIA--YAQKNRFDDAIKSYKKVLETQPDDPVLY---NNLGAAYTETGK 180

Query: 243 MDEAREVVS 251
           +DEA   + 
Sbjct: 181 LDEAIAALK 189



 Score = 39.7 bits (92), Expect = 0.44,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 28/85 (32%), Gaps = 11/85 (12%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGE 118
           Y   + + ++  F  A + + +     P                     GK  +A +  +
Sbjct: 135 YALGIAYAQKNRFDDAIKSYKKVLETQPDDPVLYN-----NLGAAYTETGKLDEAIAALK 189

Query: 119 EYITQYP----ESKNVDYVYYLVGM 139
           + I   P      KN+++ Y   G+
Sbjct: 190 KSIQLNPKIPMSHKNLEFAYRKKGL 214


>gi|92117696|ref|YP_577425.1| tetratricopeptide TPR_2 [Nitrobacter hamburgensis X14]
 gi|91800590|gb|ABE62965.1| Tetratricopeptide TPR_2 [Nitrobacter hamburgensis X14]
          Length = 446

 Score = 40.9 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 53/178 (29%), Gaps = 33/178 (18%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           K   T   +  +   +     ++       +T      + Y  A+     +N S      
Sbjct: 2   KLVHTAKAAFVLITTIACCSGAAAQSPAPPITAAAVVEQDY-DALFEQMYKNPSN----- 55

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
                 F     A +++          G Y+ A    E  +   P   N+  V   +G+ 
Sbjct: 56  --LEVSF---KFAEQAV--------KRGDYEAAIGALERMLFFNP---NLPRVKLELGVL 99

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVE--RYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
           Y ++         + +L   Y    ++     +       R Y+T    +LA  E  +
Sbjct: 100 YFKL--------GSYELARSYFQEAIKAADAPDDIRA-QVRAYLTEIDRRLARYEFSV 148


>gi|42527576|ref|NP_972674.1| TPR domain-containing protein [Treponema denticola ATCC 35405]
 gi|41818161|gb|AAS12585.1| TPR domain protein [Treponema denticola ATCC 35405]
          Length = 417

 Score = 40.9 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 33/264 (12%), Positives = 73/264 (27%), Gaps = 54/264 (20%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
           S +++    +      E+ ++A   LK  + ++A   F +     P       +L+    
Sbjct: 46  SDEIFSPEDSKQVEISELSKQAYSLLKGNSITEAINVFKKILELDPTNNY---ALVGLGD 102

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY--AQMIR-------------- 146
            +    K+ +A    ++ +  +P +    Y  + +   Y                     
Sbjct: 103 AERKNNKFNEAIKFYKQCLEHHPSNN---YALFGLADCYKSMNQFPRAIAIWEEYLKFDD 159

Query: 147 ----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV----GRNQLAAK 192
                     D     +  +   +   +++E+   + Y      ++       R  L   
Sbjct: 160 KNITVLTRVADAYRKTKEFEKAEKLYQKVLEKSPKNAYALIGLGHLNYDFKKYREALVYW 219

Query: 193 E---------------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           E                 IG  Y K   +   +  F+  L    D  +    +  L + Y
Sbjct: 220 EKVMESSGELVDIRILTSIGNCYRKMKLFDRGVYYFERALERSPDNFY---GLFGLADCY 276

Query: 238 VALALMDEAREVVSLIQERYPQGY 261
             L     +      I E  P   
Sbjct: 277 RGLNQQYNSIVYWKKILELDPNNK 300


>gi|326532464|dbj|BAK05161.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 413

 Score = 40.9 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 16/153 (10%), Positives = 46/153 (30%), Gaps = 27/153 (17%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLL 98
           +S      D  +    + ++  +      ++++  A  Y+       P      A +SL 
Sbjct: 278 KSPHTRVQDRASAEERKADLKSQGKEAFAKKDYFTAMYYYGLVMEIDPLDATLFANRSL- 336

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPE-SKNVDYVYYLVG--MSYAQMIRDVPYDQRAT 155
                     +  +A +  +     +P  SK     +Y  G  +S+ +  +         
Sbjct: 337 ----CWLRMREGDRALADAQRCKMLHPGWSK----AWYREGSALSFMEDYQG-------- 380

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
              +      +     S      +  ++  +++
Sbjct: 381 --AVDAFQEALRLDPES---SEIKKMLSEAKSK 408


>gi|325179803|emb|CCA14206.1| peptidylprolyl cistrans isomerase putative [Albugo laibachii Nc14]
          Length = 482

 Score = 40.9 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 17/157 (10%), Positives = 49/157 (31%), Gaps = 25/157 (15%)

Query: 35  LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ----CSRDFPFA 90
           L+G+  +      + +   +    ++  +     K Q +++A   + +        +  A
Sbjct: 120 LLGFAEKKKESWEMSTAEKMEECTKLKAEGTELFKTQKYAEAAAKYEEGASYLDDLY-DA 178

Query: 91  GVARKSLLMSA----F-----VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
               ++ +       +            Y +AA++  + I      KN     Y  G++ 
Sbjct: 179 EEEDQAKMKEIQTICYVNASMCHLKLENYTEAAAVSSKAIK---NDKNNIKALYRRGLAR 235

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
             +  D+           + +    +    S  ++ A
Sbjct: 236 MHL-NDLDR-------AKEDLLTAGKLDPTSRDIRRA 264


>gi|307718360|ref|YP_003873892.1| TPR domain-containing protein [Spirochaeta thermophila DSM 6192]
 gi|306532086|gb|ADN01620.1| TPR domain protein [Spirochaeta thermophila DSM 6192]
          Length = 509

 Score = 40.9 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 36/102 (35%), Gaps = 11/102 (10%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
             D +    Y  ++Y +A        +  A   F + S   P      +SL+       +
Sbjct: 249 DPDILPAYYYLGKIYREAKE------YHAALLSFEK-SVRHP--DYKLRSLIERGTCYLN 299

Query: 107 AGKYQQAASLGEEYITQYP--ESKNVDYVYYLVGMSYAQMIR 146
            G Y+ A    E  +   P   +  + Y  Y + ++Y +  R
Sbjct: 300 MGDYESAIMELERAVKLSPEATNPEMLYARYFLSIAYEKRRR 341



 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 63/216 (29%), Gaps = 39/216 (18%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV-QYSA-GKY 110
           D R     Y   + +LK      A        R   F     +          Y +  + 
Sbjct: 108 DPRNSEAHYLLGLAYLKTGRPELALMELKMVGRIGVFTEYCPEIQYRETIAELYKSFNQP 167

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           ++A       + +YPE  +    YY       +M                Y  + +E   
Sbjct: 168 EEALKEYLLLLKRYPEMPD----YYYKCGQLFEMRNQSDR-------AFIYYRKAIELNP 216

Query: 171 NSPYVKGARFYVTVGRNQL-----AAKEVEIG-RY--------------YLKRGEYVAAI 210
              Y   A F +     ++     A  E+E   RY              Y +  EY AA+
Sbjct: 217 --RYA-DAHFRLGALLYRMHKYPEARSELETALRYDPDILPAYYYLGKIYREAKEYHAAL 273

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
             F+  + +  D  +   ++      Y+ +   + A
Sbjct: 274 LSFEKSVRH-PD--YKLRSLIERGTCYLNMGDYESA 306


>gi|301059207|ref|ZP_07200145.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
 gi|300446697|gb|EFK10524.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
          Length = 578

 Score = 40.9 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 70/211 (33%), Gaps = 43/211 (20%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            Y K  + L+  N+  A +  N+  +          +L   A +     + ++AA   E 
Sbjct: 188 YYYKGRINLETGNYKAAEKALNEALKR---NQTLEPALFDKATLYQITERDKEAAGAYER 244

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            ++ YP++                               +    R+VE Y N    K A 
Sbjct: 245 LLSLYPDN-------------------------------IPARERLVEVYLNLDQKKDAA 273

Query: 180 FYVTVGRNQLAAKE---VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
             V + +      E     +G  YL++G    +I   +L++  +       ++   L  A
Sbjct: 274 HQVELIKKHSKPGEPERQFLGLIYLRQGRIDESIAELELIVRAWPK---DYKSRYYLATA 330

Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYVE 267
           Y      ++A E + LI        + R  +
Sbjct: 331 YEEKGDNEKAMEQLQLIDR---DSKYYRNAQ 358



 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 78/288 (27%), Gaps = 85/288 (29%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQ----------REVYEK---AVLFL 68
             L +   +        + Q S      +V  VR +          ++ YE    A + L
Sbjct: 1   MLLLVLVMVGPTGCATVDGQRSEKATNPAVETVRPKIARPDKPDATQKAYENFLLASVAL 60

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGV--ARKSLL---------MSAFV-------------- 103
            +  F  A  +  Q  R+ P +     + ++L           A+               
Sbjct: 61  NQGRFRDARVHLEQAIRNDPDSVYLNTKMAILLKGLKKYPEALAYAQKSVNMDPQNTRTL 120

Query: 104 ------QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
                     GK + A +  +  + Q P +K V             +I  +   Q+  + 
Sbjct: 121 TLLGDLYALTGKDELAIAEYQNILKQDPGNKRV----------RLLLITILVR-QKQFEK 169

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY-----LKRGEYVAAIPR 212
            L  +  ++++                        E+ I  YY     L+ G Y AA   
Sbjct: 170 SLVQLDTLIKQDP----------------------ELIIAYYYKGRINLETGNYKAAEKA 207

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
               L         E A+      Y       EA      +   YP  
Sbjct: 208 LNEALKRNQT---LEPALFDKATLYQITERDKEAAGAYERLLSLYPDN 252


>gi|293390070|ref|ZP_06634404.1| tetratricopeptide domain protein [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290950604|gb|EFE00723.1| tetratricopeptide domain protein [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 396

 Score = 40.9 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 75/200 (37%), Gaps = 32/200 (16%)

Query: 48  LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           LD+     +++++  K   A  F+    F +A E       D P    A  +L     + 
Sbjct: 103 LDNSPHYSFEQKLLAKQQLAKDFMTVGFFDRA-ENLYILMVDEP--EFAEGALQQLTVIY 159

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
               ++++A ++ E+     P++ NV+   Y     Y + ++ +P D +  +   Q + +
Sbjct: 160 QKTKEWKKAINVAEKLAKIAPKANNVELAQY-----YCEYVQHLPADSKENRQ--QILLQ 212

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
            ++   +                      + +    +++  Y +A+   + +L       
Sbjct: 213 ALKVSPSCVRAS-----------------MMLADLAIQQENYKSAVGFLEEILNQSP--A 253

Query: 225 HAEEAMARLVEAYVALALMD 244
           +  EA+  L   Y  L L+D
Sbjct: 254 YISEALPALKHCYQKLNLLD 273


>gi|221131863|ref|XP_002156379.1| PREDICTED: similar to Tetratricopeptide repeat protein 26 [Hydra
           magnipapillata]
          Length = 660

 Score = 40.9 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 75/210 (35%), Gaps = 36/210 (17%)

Query: 65  VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
             FL++++++ A        +       + +  L  A+  + +G+Y++A    +  + + 
Sbjct: 30  EDFLEKRDYTGAVTLLEFTRQA---GKESDEIGLWIAYSLFHSGEYERAMKEYQAILKKK 86

Query: 125 PESKNV----DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
               +V       Y+++GM                K   Q +S I +   ++        
Sbjct: 87  NNQPDVMCNLACCYFMLGM---------------YKEAQQALSNIKKTDLSNRLAFHLSH 131

Query: 181 YVTVGRNQLAAK---------EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM- 230
                 N ++           ++ +   +  R  +  AI  ++ +L +  +      A+ 
Sbjct: 132 KFNDESNLMSHHSQLQDVIEDQLSLASIHYLRSHFQEAIDIYKRILLDNRE----YYALN 187

Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQG 260
             +   Y  L   D ++EV+S+  + YP  
Sbjct: 188 VYVALCYYKLDYFDVSQEVLSVYLQHYPDS 217


>gi|320160289|ref|YP_004173513.1| secretion protein HlyD family protein [Anaerolinea thermophila
           UNI-1]
 gi|319994142|dbj|BAJ62913.1| secretion protein HlyD family protein [Anaerolinea thermophila
           UNI-1]
          Length = 465

 Score = 40.9 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 53/153 (34%), Gaps = 21/153 (13%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ------NFSKAYEYFNQCSRDFPFAGVA 93
               ++V+ +    V+  +E+   A   L +       ++ +A EY        P   +A
Sbjct: 62  SGKVQEVHGEIGDTVQDGQELARLAEDSLPQNVLLAWNDYLQAEEYLKDLQDTQP--ELA 119

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
            ++ +  A  Q    +Y++     + Y    PE +NV         +      D+   ++
Sbjct: 120 -QAQMELAQAQ---EEYEKVE---KRYRNFNPERRNVSQA------TIDTAKADLALAEK 166

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
             ++  +Y      R  N P    A   +   +
Sbjct: 167 NLEMAQKYFDLFKGRDANDPERAEALKMLAKAQ 199


>gi|218245992|ref|YP_002371363.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801]
 gi|257059043|ref|YP_003136931.1| hypothetical protein Cyan8802_1167 [Cyanothece sp. PCC 8802]
 gi|218166470|gb|ACK65207.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801]
 gi|256589209|gb|ACV00096.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8802]
          Length = 177

 Score = 40.9 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 20/145 (13%), Positives = 51/145 (35%), Gaps = 24/145 (16%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQC----SRDFPFAGVARKSLL--MSAFVQYS 106
           +    ++ YE   L+L ++ F +A +   +      +  P      ++L+     +  +S
Sbjct: 49  EQGTAQDYYELGSLYLDKKLFVQAIKLLEKALKASKKVEPQN----QALIYNALGYAYFS 104

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
             +   A    ++ I  YP     +Y   L  ++ A   + +          ++   + +
Sbjct: 105 QEQLDVAIRHYKDAIKLYP-----EYAIALNNLANAYEKKQM------INQAVETYEQTL 153

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAA 191
           +   N+     A+      R +L  
Sbjct: 154 KYEPNNK---VAKARSEALRKRLVE 175


>gi|163754421|ref|ZP_02161543.1| BatE, TRP domain containing protein [Kordia algicida OT-1]
 gi|161325362|gb|EDP96689.1| BatE, TRP domain containing protein [Kordia algicida OT-1]
          Length = 253

 Score = 40.9 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 8/77 (10%), Positives = 25/77 (32%), Gaps = 3/77 (3%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
            +    ++E A     + N+++A   +            +           Y + +   +
Sbjct: 21  SQDNTALFESANTAYNDGNYAEAIAQYKSILET---GNHSAAIYYNLGNAYYKSNEIGPS 77

Query: 114 ASLGEEYITQYPESKNV 130
               E+ +   P+ K++
Sbjct: 78  VYYFEKALQLSPDDKDI 94


>gi|91227602|ref|ZP_01261906.1| hypothetical protein V12G01_20491 [Vibrio alginolyticus 12G01]
 gi|91188495|gb|EAS74788.1| hypothetical protein V12G01_20491 [Vibrio alginolyticus 12G01]
          Length = 250

 Score = 40.9 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 45/127 (35%), Gaps = 15/127 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            Q   D+   +R     +    +  + Y +S Y               A     +G+ Y 
Sbjct: 137 YQNAVDLILKKRDYTGAIAAFQQFQKDYPDSTYS--------------ANSHYWLGQLYF 182

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + +   A+  F  V+ +Y D+    +A+ +L E         +A++    + + YP   
Sbjct: 183 AKKQDEDAVKSFAAVV-SYKDSNKRADALLKLGEIAERNNNAAQAKKYYQQVVDEYPGSA 241

Query: 262 WARYVET 268
            A+   +
Sbjct: 242 SAKLASS 248



 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 51/134 (38%), Gaps = 10/134 (7%)

Query: 50  SVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             T    ++  Y+ AV   LK+++++ A   F Q  +D+P +  +  S      + ++  
Sbjct: 126 QYTPNVDEQTAYQNAVDLILKKRDYTGAIAAFQQFQKDYPDSTYSANSHYWLGQLYFAKK 185

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           + + A       ++    +K  D        +  ++      +  A     +Y  ++V+ 
Sbjct: 186 QDEDAVKSFAAVVSYKDSNKRAD--------ALLKLGEIAERNNNAA-QAKKYYQQVVDE 236

Query: 169 YTNSPYVKGARFYV 182
           Y  S   K A   +
Sbjct: 237 YPGSASAKLASSKL 250


>gi|47221056|emb|CAG12750.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 874

 Score = 40.9 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 39/135 (28%), Gaps = 31/135 (22%)

Query: 68  LKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF----VQ-YSAGKYQQAASLGEEY 120
             E+++  A +Y+++     P      + +S    A+       Y+     +A  + + Y
Sbjct: 1   FSEKDYENAIKYYSEALELNPSNAIYYSNRS---LAYLRTECYGYALADATKALEIDKNY 57

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           I            YY    S   +           K  L+    +V    N      AR 
Sbjct: 58  IK----------GYYRRATSNMAL--------GKFKAALKDYETVVRVRPNDK---DARM 96

Query: 181 YVTVGRNQLAAKEVE 195
                   +  K  E
Sbjct: 97  KYQECNKIVKQKAFE 111


>gi|282878978|ref|ZP_06287742.1| tetratricopeptide repeat protein [Prevotella buccalis ATCC 35310]
 gi|281298977|gb|EFA91382.1| tetratricopeptide repeat protein [Prevotella buccalis ATCC 35310]
          Length = 1106

 Score = 40.9 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 22/50 (44%)

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
            + ++  Y   EH ++A   L   Y  L     A   + L++ ++P+  W
Sbjct: 608 LRRLVDGYPSYEHIDKAYYHLFLLYSRLGQSGVAARYIQLLKAQHPKSEW 657


>gi|114591080|ref|XP_001160806.1| PREDICTED: leprecan-like 1 isoform 5 [Pan troglodytes]
 gi|114591082|ref|XP_001160850.1| PREDICTED: prolyl 3-hydroxylase 2 isoform 6 [Pan troglodytes]
          Length = 527

 Score = 40.9 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 6/68 (8%)

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           F  Y  G+Y +A    + Y+  +P+ ++V     L  + Y + + D   D  A+    + 
Sbjct: 133 FAYYRVGEYVKALECAKAYLLCHPDDEDV-----LDNVDYYESLLDDSTDP-ASIEARED 186

Query: 162 MSRIVERY 169
           ++  V+R+
Sbjct: 187 LTMFVKRH 194


>gi|253568782|ref|ZP_04846192.1| TPR domain-containing protein [Bacteroides sp. 1_1_6]
 gi|251840801|gb|EES68882.1| TPR domain-containing protein [Bacteroides sp. 1_1_6]
          Length = 584

 Score = 40.9 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 65/199 (32%), Gaps = 38/199 (19%)

Query: 61  YEKAVLFL--KEQNFSKAYEYFNQCSRDFPFAGVARK-SLLMSAFVQYSAGKYQQAASLG 117
           Y + +  L  ++    KA     Q    FP    A++  L     +     KY +  S  
Sbjct: 116 YSQGLASLYQQQNELDKAVTLLEQMVVRFP----AKQDPLFNLLDLYGRQEKYDEVISTL 171

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
                +  +++ +    + +   Y QM  D        K   Q +  +V+ Y        
Sbjct: 172 NRLEKRMGKNEQLSMEKFRI---YLQMKDD--------KKAFQEIESLVQEYP------- 213

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
               + +        +V +G  YL+ G+   A   +Q VLA   D      A+  +   Y
Sbjct: 214 ----MDM------RYQVILGDVYLQNGKKQEAYDVYQKVLAAEPD---NPMAIFSMASYY 260

Query: 238 VALALMDEAREVVSLIQER 256
                 +  ++ +  +   
Sbjct: 261 KQTGQEELYQQQLDTLLLN 279


>gi|110636602|ref|YP_676809.1| TPR repeat-containing gliding mobility protein [Cytophaga
           hutchinsonii ATCC 33406]
 gi|110279283|gb|ABG57469.1| gliding motility-related protein; TPR repeat-containing protein
           [Cytophaga hutchinsonii ATCC 33406]
          Length = 794

 Score = 40.9 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 67/171 (39%), Gaps = 19/171 (11%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
            + S +  +   + Q+A    E  + +YPESK V  V Y + + Y +   +         
Sbjct: 584 QVASIY-NHKLDEPQRAIRTYENILKRYPESKYVPEVLYNLYLIYKEQDNN--------- 633

Query: 157 LMLQYMSRIVERYTNSPYVKGAR----FYVTVGRNQLAAKEVEIGRYY--LKRGEYVAAI 210
               Y +R++  + NS + K  R    +  +   N+ A  E +    Y   K   +  A 
Sbjct: 634 KQEVYKARLLNEHPNSIFAKLIRNPNYYRDSKIANKFATVEYK--DVYALYKANRFAEAD 691

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVAL-ALMDEAREVVSLIQERYPQG 260
               ++   Y D++  ++     +   + +     + ++ +S   E++P+ 
Sbjct: 692 SAGTVLSNKYPDSDILDKVAYIQILCRIKIEGTGHDVQQAISNFPEKFPES 742



 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 27/66 (40%), Gaps = 1/66 (1%)

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           Y  K  E   AI  ++ +L  Y ++++  E +  L   Y      ++     + +   +P
Sbjct: 589 YNHKLDEPQRAIRTYENILKRYPESKYVPEVLYNLYLIYKE-QDNNKQEVYKARLLNEHP 647

Query: 259 QGYWAR 264
              +A+
Sbjct: 648 NSIFAK 653


>gi|77458214|ref|YP_347719.1| type II and III secretion system protein [Pseudomonas fluorescens
           Pf0-1]
 gi|77382217|gb|ABA73730.1| putative general secretion pathway protein D [Pseudomonas
           fluorescens Pf0-1]
          Length = 615

 Score = 40.9 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 41/119 (34%), Gaps = 13/119 (10%)

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYL-------VGMSYAQMIRDVPYDQRATKLML 159
            G+Y+   +  EE + + P         +L         ++      D    +R      
Sbjct: 35  QGQYEAGLARIEEGLRENPRDTE----LHLLLNSGRAKAITALLTSGDTDRARRDFASAR 90

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
              SR++    N+   + A   +   R+     E+  G   L+RG+   A  + + +L 
Sbjct: 91  TAYSRVLTIEPNNRRAQDALRQLDYLRSMDEKLELARGD--LRRGDIYGADRQVKQILE 147


>gi|296125876|ref|YP_003633128.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
 gi|296017692|gb|ADG70929.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
          Length = 1364

 Score = 40.9 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 69/226 (30%), Gaps = 54/226 (23%)

Query: 57   QREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
              EVY K A   L + +F  +   F +    +P         L S         Y+    
Sbjct: 1031 DDEVYPKLAQYLLDKDDFYGSRVLFEKLLAAYPNN-------LESIVGY---ADYETRLK 1080

Query: 116  LGEEYITQ-----------YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
              +  +              P +K  +YVY ++G  Y  +              ++  + 
Sbjct: 1081 HYDRAMELLNTAALPLYESNPFNKGKEYVYNMLGQIYYNL--------GEYGNAVRNFNE 1132

Query: 165  IV---ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY-LKRGEYVAAIPRFQLVLANY 220
             +   E Y ++ Y                     +G  Y  K  +Y  A   +Q+   N 
Sbjct: 1133 ALAINEVYPDANY--------------------NLGNVYFYKDKDYAKAKQYYQMAYDNL 1172

Query: 221  SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
            +    +++ +  L   Y A    D A E  + + ++ P      Y 
Sbjct: 1173 APNLRSDQLLYNLSWIYYADGEYDSAFEGFNALFQKNPSNSVVSYA 1218


>gi|221055960|ref|XP_002259118.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
           knowlesi strain H]
 gi|193809189|emb|CAQ39891.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
           knowlesi strain H]
          Length = 472

 Score = 40.9 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 54/183 (29%), Gaps = 37/183 (20%)

Query: 38  WERQSSRDVYL---DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ----CSRDFPFA 90
                S++  L   +S   ++      E+      E+N+  A  YF +        FP  
Sbjct: 98  CTHDHSKERQLYEKESKEKIKASNAFNEEGKKAFYEKNYKLACVYFRKGLIQLDYSFPDT 157

Query: 91  GVARKSL--------LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
              ++          L  A  ++    Y +  S     +      K     YY  G +Y 
Sbjct: 158 DQEQQEQNRLEINLHLNLAITKFHMSNYHECISECSTVLNL---DKKNAKAYYRKGQAYM 214

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
            +               +   +++E          A+  +   +N++A         Y K
Sbjct: 215 SLD--------MYSEAKKEFLKVLEINPGD---NDAKRSLLTLKNKIAN--------YTK 255

Query: 203 RGE 205
           R +
Sbjct: 256 REK 258


>gi|171915620|ref|ZP_02931090.1| hypothetical protein VspiD_30655 [Verrucomicrobium spinosum DSM
           4136]
          Length = 962

 Score = 40.9 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 75/228 (32%), Gaps = 47/228 (20%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
           V+          + ++ + +  L++    +A + F +  + FP    A  +++  A+  +
Sbjct: 430 VHQKHPQHALAPQCLFMEGICLLEQDLNREALDAFAEVPKRFP----AATAVVEDAW-YW 484

Query: 106 ------SAGKYQQAASLGEEYITQYPE-SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
                    ++  A S  E+Y+ +Y E   +     + +  S   +              
Sbjct: 485 GGMSLSLDKQHAAARSRMEDYLKRYTEKGAHAAEARFRIAFSSFGLSEHA--------RA 536

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
           +  +   ++R   +   + A+  +                        + A  R    L 
Sbjct: 537 INELGAFLKREPGTLMAEEAKLLLGDA---------------------LGAEGRIDEALR 575

Query: 219 NYS------DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            Y+      +A  AEEA+ R    Y      DE ++  S+    +P+ 
Sbjct: 576 AYAEVNPKLNARFAEEAVFRTGNIYKLAERFDEMQDHFSVFVRNHPRS 623


>gi|166364038|ref|YP_001656311.1| photosystem I assembly related protein Ycf37 [Microcystis
           aeruginosa NIES-843]
 gi|166086411|dbj|BAG01119.1| photosystem I assembly related protein Ycf37 [Microcystis
           aeruginosa NIES-843]
          Length = 178

 Score = 40.9 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 20/140 (14%), Positives = 50/140 (35%), Gaps = 18/140 (12%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR--KSLL--MSAFVQYSAGKYQ 111
             +E YE   L+L ++ + +A     +  +      +    ++L+     F  ++  + +
Sbjct: 51  TAKEYYELGSLYLDKKLYVQALSLLQKALKISEEESIEPENQALIYNAIGFSYFAQEQLE 110

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            A    +E I  YP+        Y + ++    + +     +  K  L+     ++   N
Sbjct: 111 LAIRNYKEAIKLYPQ--------YSIALNNLGNVYEKK---QMAKKALETYEETLKFDPN 159

Query: 172 SPYVKGARFYVTVGRNQLAA 191
           +     A+      R + A 
Sbjct: 160 N---TVAKKRAESLRKRFAE 176


>gi|197102920|ref|NP_001124594.1| tetratricopeptide repeat protein 38 [Pongo abelii]
 gi|75042639|sp|Q5RFF7|TTC38_PONAB RecName: Full=Tetratricopeptide repeat protein 38; Short=TPR repeat
           protein 38
 gi|55725085|emb|CAH89410.1| hypothetical protein [Pongo abelii]
 gi|55725270|emb|CAH89500.1| hypothetical protein [Pongo abelii]
          Length = 469

 Score = 40.9 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 46/148 (31%), Gaps = 29/148 (19%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQ----------REVYEKAVLFLKEQNFSKAYEYF 80
               L+G       D  LD       +           +++  AV    + NF KA E +
Sbjct: 72  TGLVLIGTGSSVKLDKELDLAVKTMMEVSRTQPLTRREQLHVSAVETFAKGNFPKACELW 131

Query: 81  NQCSRDFPFAGVARKSLLMSA-----FVQYSAGKYQQAASLGEEYITQYPE-SKNVDYVY 134
            Q  +D P          M A        +  G  +Q           YP  + ++    
Sbjct: 132 EQILQDHPTD--------MLALKFSHDAYFYLGYQEQMRDSVAR---IYPFWTPDIPLSS 180

Query: 135 YLVGMSYAQMIRDVPYDQ--RATKLMLQ 160
           Y+ G+    ++    YDQ  +  K  L 
Sbjct: 181 YVKGIYSFGLMETNFYDQAEKLAKEALS 208


>gi|56605882|ref|NP_001008437.1| dnaJ homolog subfamily C member 3 precursor [Gallus gallus]
 gi|73620805|sp|Q5ZI13|DNJC3_CHICK RecName: Full=DnaJ homolog subfamily C member 3; Flags: Precursor
 gi|53136602|emb|CAG32630.1| hypothetical protein RCJMB04_31h14 [Gallus gallus]
          Length = 503

 Score = 40.9 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 38/297 (12%), Positives = 86/297 (28%), Gaps = 68/297 (22%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
            L      +        +T     + +Y +A+   +++++  A    ++      +   A
Sbjct: 130 VLKSNPSNNEEKEAQTQLTKSDELQRLYSQALSAYRQEDYEAAIPLLDEILAVCVW--DA 187

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY----VYYLVG----------- 138
               L  A      G+  +A S  +       ++    Y    +YY +G           
Sbjct: 188 ELRELR-AECYIKEGEPSKAISDLKAAAKLKSDNTEAFYKISRIYYQLGDHELSLSEVRE 246

Query: 139 -----------MSYAQMIRDVPYDQRATKL---------MLQYMSRIVERYTNSP-YVKG 177
                       S  + ++ +     + +           +     +++   + P Y   
Sbjct: 247 CLKLDQDHKQCFSLYKQVKKLNKQIESAEEFIREGRYEDAISKYDSVMKTEPDVPVYATR 306

Query: 178 ARFYVTVG--RNQLAAKEVEI------------------GRYYLKRGEYVAAIPRFQLVL 217
           A+  +     +NQ A + + +                     YL    Y  AI  ++   
Sbjct: 307 AKERICHCLSKNQQATEAITVCTQVLQLEPTNVNALKDRAEAYLLEDLYEEAIKDYETAQ 366

Query: 218 ANYSDAEHAEEAMAR----LVEA-----YVALALMDEAREVVSLIQERYPQGYWARY 265
           AN  + +   E + R    L ++     Y  L +   AR+   +   R     W   
Sbjct: 367 ANSENDQQIREGLERAQRMLKQSQKRDYYKILGVKRNARKQEIIKAYRKLASQWHPD 423


>gi|325117705|emb|CBZ53256.1| putative TPR domain-containing protein [Neospora caninum Liverpool]
          Length = 780

 Score = 40.9 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 22/184 (11%), Positives = 56/184 (30%), Gaps = 37/184 (20%)

Query: 37  GWERQSSRDVYL---DSVTDVRYQREVYEKAVLFLKEQNFSKAY----EYFNQCSRDFPF 89
           G     S++  +    +   +       ++     +E+N+  A     +   Q    FP 
Sbjct: 111 GCSHDHSKERQIYEKPTGEKIDAAERFRQEGNAAFREKNYGLAAVNYRKALLQFDYTFPD 170

Query: 90  AGVARKSL--------LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
               ++ +        L  A  +     Y +        +   P++      +Y  G+++
Sbjct: 171 TDEEQERMDSVKLPCHLNLAACKLHQQDYDEVYIQCRLALEMDPKNVK---AFYRRGLAH 227

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            Q    V           + +   + +  NS  ++ A   + + R ++          Y 
Sbjct: 228 LQQDDFV--------KAKEDLMEALAQEPNSKEIRDA---LMLLREKIQR--------YQ 268

Query: 202 KRGE 205
           +R  
Sbjct: 269 RRSA 272


>gi|307256760|ref|ZP_07538539.1| hypothetical protein appser10_7630 [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|306864808|gb|EFM96712.1| hypothetical protein appser10_7630 [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
          Length = 338

 Score = 40.9 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 82/212 (38%), Gaps = 34/212 (16%)

Query: 48  LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           LD+  D   ++++  K   A  F+    + +A  Y+     +      A  SL     V 
Sbjct: 43  LDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDE---PEFAVNSLTQLMTVY 99

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
               ++++A ++ E+ I   P++  +   +Y     YAQ I++   D       L  +S+
Sbjct: 100 QKTKEWKKAINVAEKLIKIEPDTDKIPLSHYY--CEYAQAIKNEDLDGH-----LSALSK 152

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
            +E                      A   + +G YYL + ++ +A+  ++ +L    D  
Sbjct: 153 ALEYSPQC-----------------ARASILLGDYYLAQNQFQSALKNYERILQQDPD-- 193

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQER 256
              E + ++   Y  +A  D A   + LI+  
Sbjct: 194 FISEVIEKIKACY--MAENDLANYELFLIRAN 223


>gi|282901707|ref|ZP_06309623.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
 gi|281193470|gb|EFA68451.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
          Length = 802

 Score = 40.9 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 50/136 (36%), Gaps = 26/136 (19%)

Query: 49  DSVTDVRYQREVY--EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQ 104
           +  T+++ +  V    + +  ++ +N+ +A   F++     P  F    ++      +  
Sbjct: 665 NKATEIKPEESVAWLNRGLSLVELENYEEAISSFDKALEIQPSSFKIWDKR-----GYTL 719

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
              G+ ++A +   + +   P     DY    Y     YA         Q+  +  L  +
Sbjct: 720 VRLGRDEEAITNFNKALELNP-----DYGSALYHKAACYAL--------QKNVESALVNL 766

Query: 163 SRIVERYTNSPYVKGA 178
            + ++   +  Y + A
Sbjct: 767 QQAIKHKPS--YREDA 780



 Score = 38.9 bits (90), Expect = 0.71,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 43/130 (33%), Gaps = 21/130 (16%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAF 102
           DV   +  D     E+ ++A   L +  +  A   + + +   P           L   F
Sbjct: 562 DVQTVNNLDNNVDHEI-QEAEELLSQNRYEDALSIYEKITSIQPDHGEHW-----LKRGF 615

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           +     +Y++A  +  + I   P      Y  ++ +G++  ++ +         +     
Sbjct: 616 ILSKLKRYKEAVGVYNQVIRINPAH----YQAWFDIGITCGKLGKH--------QEAFNC 663

Query: 162 MSRIVERYTN 171
            ++  E    
Sbjct: 664 FNKATEIKPE 673


>gi|189461341|ref|ZP_03010126.1| hypothetical protein BACCOP_01991 [Bacteroides coprocola DSM 17136]
 gi|189431870|gb|EDV00855.1| hypothetical protein BACCOP_01991 [Bacteroides coprocola DSM 17136]
          Length = 250

 Score = 40.9 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 30/104 (28%), Gaps = 18/104 (17%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
            SI + FL+G  + +S  V                +A    +E  F+ A E +       
Sbjct: 4   LSIIIAFLIGLFQFASASVTK-------------AEADKDYQENKFADAIEKYEAILA-- 48

Query: 88  PFAG-VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
             +   +           Y      +A    E  +   P   ++
Sbjct: 49  --SEGESADIYYNLGNSYYKNKNIAKAVLNYERALLMNPGDADI 90


>gi|115376734|ref|ZP_01463961.1| tetratricopeptide repeat domain protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|115366283|gb|EAU65291.1| tetratricopeptide repeat domain protein [Stigmatella aurantiaca
           DW4/3-1]
          Length = 1190

 Score = 40.9 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 61/162 (37%), Gaps = 34/162 (20%)

Query: 93  ARKSLLMSAFVQYSAGKYQQ-AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
           + K+ L++      + +Y + A     + + +YP  +  D V + +G    +  +D    
Sbjct: 141 SEKAELIA-----RSKEYGKHAVEQYTKIVQEYPSFERSDEVLFFLGNFLMEDGQD---- 191

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL-----KRGEY 206
               +  L    R+VE++  S ++                  +  G YY      KR E 
Sbjct: 192 ----RKALVAYKRLVEKFPKSKFLPDVY--------------LAFGEYYFNNSKGKRPEL 233

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
             A+  ++     +++++    A+ +    Y  +    +A++
Sbjct: 234 EKALEAYRRAAE-FTESQAYAFAIYKQGWCYFNMGEYAQAKD 274



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 27/82 (32%), Gaps = 8/82 (9%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
             D        + +Y  +V F K +   +A E        +P +         S +    
Sbjct: 708 VKDFPETTIADQALYNASVDFFKAKMLDRAIEVRQSLISQYPRSRFVP----DSIYANAE 763

Query: 107 A----GKYQQAASLGEEYITQY 124
           A    G + QAA   E Y+  Y
Sbjct: 764 ALEAIGDFAQAADTYELYVKGY 785


>gi|315637612|ref|ZP_07892818.1| conserved hypothetical protein [Arcobacter butzleri JV22]
 gi|315478066|gb|EFU68793.1| conserved hypothetical protein [Arcobacter butzleri JV22]
          Length = 313

 Score = 40.9 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 17/135 (12%), Positives = 39/135 (28%), Gaps = 27/135 (20%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQC--------SRDFPFAGVARKSLLMSAFVQYSAGKY 110
           ++  +A      + ++ A   + +           +F    +            Y   KY
Sbjct: 198 KLMNEAKKDYDAKAYNTAIPKYEKLIEVNYKPAENNFYLGEM-----------WYKRKKY 246

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             A S  ++           D   Y+  +     I       +  +    +   ++E Y 
Sbjct: 247 DTAISHFKKSAMLN------DKAAYMPTLLLHSAISFEN--VKDKENAKSFYGTLIELYP 298

Query: 171 NSPYVKGARFYVTVG 185
           NS   K A+  ++  
Sbjct: 299 NSSEAKEAKTKLSKL 313


>gi|288800162|ref|ZP_06405621.1| putative BatD protein [Prevotella sp. oral taxon 299 str. F0039]
 gi|288333410|gb|EFC71889.1| putative BatD protein [Prevotella sp. oral taxon 299 str. F0039]
          Length = 250

 Score = 40.9 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 10/71 (14%), Positives = 23/71 (32%), Gaps = 8/71 (11%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEE 119
           + A    ++  +++A + + +  +      V   + L    A   Y       A    E 
Sbjct: 26  DSADTNYQKGIYTQAIKAYQELLK------VGESATLHYNLANAYYKTNNLALAVLNYER 79

Query: 120 YITQYPESKNV 130
            +   P  K +
Sbjct: 80  ALHLSPNDKGI 90


>gi|182626237|ref|ZP_02953995.1| tetratricopeptide repeat protein [Clostridium perfringens D str.
           JGS1721]
 gi|177908501|gb|EDT71034.1| tetratricopeptide repeat protein [Clostridium perfringens D str.
           JGS1721]
          Length = 475

 Score = 40.9 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 45/142 (31%), Gaps = 14/142 (9%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM--SAF---- 102
           +++      +++Y K     KE+ +  A + F +    + F+     S L     +    
Sbjct: 340 ENLMKTDGVKDLYLKGSDLFKEKKYEDALKDFEKA---YAFSS---DSYLRPHLIYFMGT 393

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
              +  K  +A    +EY+  Y    + +   Y        +       +  +    +Y 
Sbjct: 394 SYENLDKNTEAIKYFQEYLKDYKAKPDAEDFMY-TPQCLYNLAILYNK-EGNSAESKKYA 451

Query: 163 SRIVERYTNSPYVKGARFYVTV 184
             I   Y N+ +       +  
Sbjct: 452 QEIENDYPNTMFYNDVTKKIIY 473



 Score = 36.6 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 27/73 (36%), Gaps = 6/73 (8%)

Query: 200 YLKRGEYVAAIPRFQLVLANY---SDAE---HAEEAMARLVEAYVALALMDEAREVVSLI 253
           Y    +   AI  FQ  L +Y    DAE   +  + +  L   Y       E+++    I
Sbjct: 395 YENLDKNTEAIKYFQEYLKDYKAKPDAEDFMYTPQCLYNLAILYNKEGNSAESKKYAQEI 454

Query: 254 QERYPQGYWARYV 266
           +  YP   +   V
Sbjct: 455 ENDYPNTMFYNDV 467


>gi|320034523|gb|EFW16467.1| serine/threonine protein phosphatase PPT1 [Coccidioides posadasii
           str. Silveira]
          Length = 478

 Score = 40.9 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 66/208 (31%), Gaps = 55/208 (26%)

Query: 73  FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
           ++KA E ++      P +    ++             Y  A +   + I   P      Y
Sbjct: 32  YTKAIEKYD----RDP-SFWCNRAQ-----ANIKLEAYGYAIADATKAIELDPS-----Y 76

Query: 133 --VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
              Y+   ++   ++          +  L+    +V +  N      A+  +        
Sbjct: 77  VKAYWRRAVANTAILNS--------REALKDFKTVVRKAPNDR---DAKLKLAECEKL-- 123

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR----LVEAYVALALMDE- 245
                     ++R E+  AI   +           A E +      + E+Y  + L DE 
Sbjct: 124 ----------VRRIEFEKAIEVAE--------PPSAFEGLDIEAIKVEESYDGVHLGDEM 165

Query: 246 AREVVSLIQERYPQGYW--ARYVETLVK 271
            +E +  + ER+  G     +Y   +VK
Sbjct: 166 TQEFIDDMIERFKNGKKIHKKYAYKIVK 193


>gi|298368678|ref|ZP_06979996.1| tetratricopeptide repeat protein [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298282681|gb|EFI24168.1| tetratricopeptide repeat protein [Neisseria sp. oral taxon 014 str.
           F0314]
          Length = 610

 Score = 40.9 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 45/141 (31%), Gaps = 27/141 (19%)

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +  +A +    Y+   P S        +  + Y  +I         T    + +      
Sbjct: 461 QPDKAIADLRRYLKLNPNSAAG-----MNALGYTMLISRQSGI-SDTDEAFKLIQTAYNL 514

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
              SP +  +   +                 Y ++G+   A+P  Q     Y D+E A  
Sbjct: 515 DPESPAINDS---MGWA--------------YYRKGDAQTALPYLQYAFGRYPDSEVA-- 555

Query: 229 AMARLVEAYVALALMDEAREV 249
             A L E    L   +EA++V
Sbjct: 556 --AHLGEVLWQLGQKEEAKKV 574


>gi|291060017|gb|ADD72752.1| TPR domain-containing protein [Treponema pallidum subsp. pallidum
           str. Chicago]
          Length = 658

 Score = 40.9 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 66/217 (30%), Gaps = 38/217 (17%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           ++YE       ++++  A E++     ++  +      +    A   Y+ G+Y QA    
Sbjct: 23  QLYEAGRKAHVQEDWHAAIEFYQEALKKNASYN----LAYRGLAECFYALGEYDQALHHV 78

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
            +          +     L  +    ++     DQ            I+ RY N      
Sbjct: 79  RKAQKL------MAQDLSLEKLCAFSLVGQGELDQ-----ARSLFEEILARYPN-----D 122

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR--------FQLVLANYSDAEHAEEA 229
                      LA  EV  GR    R  Y AA+ R          L L +Y +A H   A
Sbjct: 123 VDARFG-----LAEIEVSKGRLSSARLLYQAALERQAENRKALLSLALISY-EAGHYPRA 176

Query: 230 MARLVEAYVALALMDEA---REVVSLIQERYPQGYWA 263
           +  +  A        +       ++ ++  Y      
Sbjct: 177 LTYVERALQYHGDNAQVHFFAAYLATLRAHYEDAERY 213


>gi|118400972|ref|XP_001032807.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89287152|gb|EAR85144.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 925

 Score = 40.9 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 32/104 (30%), Gaps = 10/104 (9%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKS 96
                +          +    ++ +     K+ +F KA + + Q     P  F     K+
Sbjct: 476 NSNQEQQQQKYKGDTKKQAENLHSQGFEMRKKGDFQKAIQLYTQAIELNPRHF-----KA 530

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
                F       Y  A +   + +   P +    Y YY  G+S
Sbjct: 531 FFNRGFAYDKLEMYDLAIADYSQALEIDPNN---AYAYYNRGIS 571


>gi|332706139|ref|ZP_08426210.1| Tfp pilus assembly protein PilF [Lyngbya majuscula 3L]
 gi|332355117|gb|EGJ34586.1| Tfp pilus assembly protein PilF [Lyngbya majuscula 3L]
          Length = 767

 Score = 40.9 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 77/234 (32%), Gaps = 38/234 (16%)

Query: 45  DVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           + + D  + +     +Y       L E  + +A E + Q      +  VA  SL   A +
Sbjct: 407 ENHPDVASSLNNLALLYWSMGRYDLAEPLYKQALELYKQLLGHH-YPDVAT-SLNNLALL 464

Query: 104 QYSAGKYQQAASLGEEYITQY-----PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
            YS G+Y QA  L ++ +  Y      +  +V      + + Y  M R     +   +  
Sbjct: 465 YYSMGRYDQAEPLYQKVLELYKQLLGQDHPDVARSLNNLALLYWSMGR-YDLAEPLIQQA 523

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
           L+   +++  +   P V  +   + +               Y   G Y  A P  Q  L 
Sbjct: 524 LELFKQLLGHH--HPLVAISLNNLGLL--------------YKSMGRYDQAEPLIQQALE 567

Query: 219 NY-----SDAEHAEEAMARLVEAYVALALMDEARE--------VVSLIQERYPQ 259
                   D  H   ++  L   Y ++   D+A             L+   +P 
Sbjct: 568 ITKQGLGQDHPHVATSLNNLAALYDSMGRYDQAEPLLQQALELYKQLLGHHHPD 621


>gi|255068170|ref|ZP_05320025.1| putative periplasmic protein [Neisseria sicca ATCC 29256]
 gi|255047597|gb|EET43061.1| putative periplasmic protein [Neisseria sicca ATCC 29256]
          Length = 246

 Score = 40.9 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 16/131 (12%), Positives = 47/131 (35%), Gaps = 11/131 (8%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           ++ +  + +  +Y +A+ + +  N++ A             +  AR+++ +    Q   G
Sbjct: 119 EADSANQNETHLYNQALKYYQRNNYAAAAAVLKGADGGN-GSESARRNMYLLLQSQQHMG 177

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVE 167
             +    +G  +  ++  S       + +G    +   +D+               ++++
Sbjct: 178 NCESVIEIGGRFANRFRNSPQAPDALFSIGQCQYKLQQKDIAR---------NTWRKLIQ 228

Query: 168 RYTNSPYVKGA 178
            Y  S   K A
Sbjct: 229 SYPGSAAAKRA 239



 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%), Gaps = 7/57 (12%)

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
             RF+       ++  A +A+  + +    L   D AR     + + YP    A+  
Sbjct: 190 ANRFR-------NSPQAPDALFSIGQCQYKLQQKDIARNTWRKLIQSYPGSAAAKRA 239


>gi|18310039|ref|NP_561973.1| tetratricopeptide repeat protein [Clostridium perfringens str. 13]
 gi|110800967|ref|YP_695759.1| TPR repeat-containing protein [Clostridium perfringens ATCC 13124]
 gi|18144718|dbj|BAB80763.1| conserved hypothetical protein [Clostridium perfringens str. 13]
 gi|110675614|gb|ABG84601.1| tetratricopeptide repeat protein [Clostridium perfringens ATCC
           13124]
          Length = 473

 Score = 40.9 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 45/142 (31%), Gaps = 14/142 (9%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM--SAF---- 102
           +++      +++Y K     KE+ +  A + F +    + F+     S L     +    
Sbjct: 338 ENLMKTDGVKDLYLKGSDLFKEKKYEDALKDFEKA---YAFSS---DSYLRPHLIYFMGT 391

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
              +  K  +A    +EY+  Y    + +   Y        +       +  +    +Y 
Sbjct: 392 SYENLDKNTEAIKYFQEYLKDYKAKPDAEDFMY-TPQCLYNLAILYNK-EGNSAESKKYA 449

Query: 163 SRIVERYTNSPYVKGARFYVTV 184
             I   Y N+ +       +  
Sbjct: 450 QEIENDYPNTMFYNDVTKKIIY 471



 Score = 36.6 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 27/73 (36%), Gaps = 6/73 (8%)

Query: 200 YLKRGEYVAAIPRFQLVLANY---SDAE---HAEEAMARLVEAYVALALMDEAREVVSLI 253
           Y    +   AI  FQ  L +Y    DAE   +  + +  L   Y       E+++    I
Sbjct: 393 YENLDKNTEAIKYFQEYLKDYKAKPDAEDFMYTPQCLYNLAILYNKEGNSAESKKYAQEI 452

Query: 254 QERYPQGYWARYV 266
           +  YP   +   V
Sbjct: 453 ENDYPNTMFYNDV 465


>gi|117924934|ref|YP_865551.1| hypothetical protein Mmc1_1636 [Magnetococcus sp. MC-1]
 gi|117608690|gb|ABK44145.1| Tetratricopeptide TPR_2 repeat protein [Magnetococcus sp. MC-1]
          Length = 968

 Score = 40.9 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 29/225 (12%), Positives = 65/225 (28%), Gaps = 39/225 (17%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
                ++  +A  +L++    +A   +       P +  A +          +AG+  QA
Sbjct: 2   ESPAAQL-SQAQAYLQQGQLQQAINSYQNLLAQHPESVAAWQG---IGSALLAAGQPLQA 57

Query: 114 ASLGEEYITQYPES-KNVDYVYYLVGM-SYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
               E  +   P+   ++      + + +  Q        Q   +  +Q   R  +   N
Sbjct: 58  VDFFERALALDPQHYPSI------LALGTLYQQ-------QGRLERAVQLFLRGAQLQPN 104

Query: 172 -----------------SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
                            +   + A          +    + +G    + GE   A+  +Q
Sbjct: 105 QPLVHFNLGVVLAAQGRTEQAQSAYRKALALNENIPEAWLNLGNLLSRTGELQQALVCYQ 164

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
             L          +A   L      L    EA  ++  + ++ P 
Sbjct: 165 QAL---QRRPSFTQAGFGLANTLTTLKRHTEALTILEPLCQQNPD 206


>gi|332298495|ref|YP_004440417.1| hypothetical protein Trebr_1866 [Treponema brennaborense DSM 12168]
 gi|332181598|gb|AEE17286.1| hypothetical protein Trebr_1866 [Treponema brennaborense DSM 12168]
          Length = 158

 Score = 40.9 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 15/109 (13%), Positives = 39/109 (35%), Gaps = 9/109 (8%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           +  +F +T+F   A   + G            ++ +     E+ + A       N   A 
Sbjct: 2   KQTRFFITVFCLCAAAVMGGCYS------VPKTIPEDLSAEELVQLAQSSFDAGNIKAAE 55

Query: 78  EYFNQCSRDFPFAGVA--RKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
            Y+    + +    +    ++    A ++   GK+++A  +    ++ Y
Sbjct: 56  VYYETIIKRY-GNDINLLVEAEFEIAHLKVKQGKWEEAVPMLNRILSYY 103



 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 44/115 (38%), Gaps = 18/115 (15%)

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
            +    +D    K    Y   I++RY N               N L   E EI    +K+
Sbjct: 40  QLAQSSFDAGNIKAAEVYYETIIKRYGND-------------INLLVEAEFEIAHLKVKQ 86

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           G++  A+P    +L+ Y   E        L  AY  L L+D A+    ++++  P
Sbjct: 87  GKWEEAVPMLNRILSYYESDES-----GYLSAAYKKLVLIDLAKAPEHMLEKAAP 136


>gi|320104835|ref|YP_004180426.1| hypothetical protein Isop_3315 [Isosphaera pallida ATCC 43644]
 gi|319752117|gb|ADV63877.1| hypothetical protein Isop_3315 [Isosphaera pallida ATCC 43644]
          Length = 986

 Score = 40.9 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 78/254 (30%), Gaps = 52/254 (20%)

Query: 60  VYE---KAVLFLKEQNFSKAYEYFNQC-SRDFP-FAGVARKSLLMSAFVQYSAGKYQQAA 114
           +Y    +   + +     +A   +NQ      P    + RK            G+Y  AA
Sbjct: 295 LYAKMWQGKCYEESGRLGEAMGLYNQLLENRDPRLGDLNRKVGYFRIVALGKRGEYALAA 354

Query: 115 SLGEEYITQYPESKNVDYVYYLVGM-----------SYAQMIRDV----PYDQRATKLML 159
                ++  +P      Y   + G+           +  +  +D       D  AT+++ 
Sbjct: 355 DEANRWLLSHP-----AYAMTVEGLGVQLQKAKNMIAQMEAQKDTLARTERD-AATRVVR 408

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY-Y----------LKRGEYVA 208
             +  +V  Y  SP+   A   +     + A +  E+ +  Y          ++ G +  
Sbjct: 409 DTLRNVVRVY--SPHKAEALVLLQKYDPKSALRAEEVAKMKYDEASSAAEAAIQAGNFPE 466

Query: 209 AIP-------------RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           AI              R   +       + A  A   L  AY A     E+  +   +  
Sbjct: 467 AINLLKHAINQAFVEGRSNTLEERSKTLDQANRARYLLSYAYYANGDFYESATLAEFLAR 526

Query: 256 RYPQGYWARYVETL 269
           RYP+   A     +
Sbjct: 527 RYPENGLAAKATEI 540


>gi|303318773|ref|XP_003069386.1| Serine/threonine protein phosphatase 5 , putative [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240109072|gb|EER27241.1| Serine/threonine protein phosphatase 5 , putative [Coccidioides
           posadasii C735 delta SOWgp]
          Length = 478

 Score = 40.9 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 66/208 (31%), Gaps = 55/208 (26%)

Query: 73  FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
           ++KA E ++      P +    ++             Y  A +   + I   P      Y
Sbjct: 32  YTKAIEKYD----RDP-SFWCNRAQ-----ANIKLEAYGYAIADATKAIELDPS-----Y 76

Query: 133 --VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
              Y+   ++   ++          +  L+    +V +  N      A+  +        
Sbjct: 77  VKAYWRRAVANTAILNS--------REALKDFKTVVRKAPNDR---DAKLKLAECEKL-- 123

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR----LVEAYVALALMDE- 245
                     ++R E+  AI   +           A E +      + E+Y  + L DE 
Sbjct: 124 ----------VRRIEFEKAIEVAE--------PPSAFEGLDIEAIKVEESYDGVHLGDEM 165

Query: 246 AREVVSLIQERYPQGYW--ARYVETLVK 271
            +E +  + ER+  G     +Y   +VK
Sbjct: 166 TQEFIDDMIERFKNGKKIHKKYAYKIVK 193


>gi|237739094|ref|ZP_04569575.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31]
 gi|229423694|gb|EEO38741.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31]
          Length = 446

 Score = 40.9 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 19/43 (44%)

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
            E    +  +Y  L    E  + + L+++ +P   WA+  E L
Sbjct: 399 PEIYYNIASSYAKLGNRVEVTKYIRLLKQEFPNSSWAKKSEAL 441


>gi|190344737|gb|EDK36477.2| hypothetical protein PGUG_00575 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 529

 Score = 40.9 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 22/159 (13%), Positives = 44/159 (27%), Gaps = 33/159 (20%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQ 111
           V    ++ ++     K   F +A E + +     P      + ++ +           Y 
Sbjct: 3   VAEAVKLKDEGNEHFKAHRFDEAIESYTKAIEVDPKNAVFYSNRAQV-----HIKLENYG 57

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            A    +E +   P        YY  G++   +++         K        I++   N
Sbjct: 58  LAIIDCDEALKVDPSFTK---AYYRKGVAQMAILK--------YKEAQANFKTILKTLPN 106

Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
                          N            YLK+  +  AI
Sbjct: 107 DKLTLENYK---QCVN------------YLKKQAFEKAI 130


>gi|154252475|ref|YP_001413299.1| TPR repeat-containing protein [Parvibaculum lavamentivorans DS-1]
 gi|154156425|gb|ABS63642.1| TPR repeat-containing protein [Parvibaculum lavamentivorans DS-1]
          Length = 205

 Score = 40.9 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 30/70 (42%), Gaps = 7/70 (10%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLG 117
           + ++ +  L EQ++ +A+ YF++     P FA    +++ +      Y    Y  A    
Sbjct: 88  LMQRGLDALHEQDYDRAHFYFDEVVVLSPGFAEGWNKRATI-----HYIREDYSSALRDI 142

Query: 118 EEYITQYPES 127
           E+ +   P  
Sbjct: 143 EQTLRLEPRH 152


>gi|300865047|ref|ZP_07109874.1| putative Calcium/calmodulin-dependent protein kinase [Oscillatoria
            sp. PCC 6506]
 gi|300336984|emb|CBN55024.1| putative Calcium/calmodulin-dependent protein kinase [Oscillatoria
            sp. PCC 6506]
          Length = 1081

 Score = 40.9 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 13/129 (10%), Positives = 37/129 (28%), Gaps = 26/129 (20%)

Query: 62   EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            ++    ++ Q +  A   F++  +  P  +     + +           +Y +A +  ++
Sbjct: 968  DQGKALMQLQKYEDAIAAFDKALKINPNDYPSWGSRGI-----ALTKLQRYDEALAAFDK 1022

Query: 120  YITQYPESK----NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
             I           N  +     G S               +  +   ++ +E   +    
Sbjct: 1023 AIAINSNDPLAWANRAWALEQWGRS---------------EDAIAAYNKAIEIKPDFQPA 1067

Query: 176  KGARFYVTV 184
              AR  +  
Sbjct: 1068 IEARKMLLE 1076


>gi|189485718|ref|YP_001956659.1| hypothetical protein TGRD_715 [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|170287677|dbj|BAG14198.1| hypothetical protein [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 214

 Score = 40.9 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 33/177 (18%), Positives = 64/177 (36%), Gaps = 25/177 (14%)

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
             R   F   A  + L +A+  +  G  +   +L +E I ++P+  +  Y        +A
Sbjct: 46  ILRLHAF-EEASSAKLAAAYASFMHGDKKSGTALIDEMIAKFPK-TSAAY--------HA 95

Query: 143 QMIR-DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
           ++I+ D   +       L+ ++ IV    +      A   +                 Y 
Sbjct: 96  RLIKADFLTEILEYDEALKILTEIVNNGKSDAIKSLAHARIIYI--------------YD 141

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
            + +Y+ A    +  +A Y D     +    L E Y+     DEA EV + +   +P
Sbjct: 142 SKKDYLNAALVSKEFIAKYPDHFLTRDIYLNLAEYYILSGSKDEAAEVFNEVLVNFP 198



 Score = 35.5 bits (81), Expect = 8.6,   Method: Composition-based stats.
 Identities = 13/117 (11%), Positives = 42/117 (35%), Gaps = 14/117 (11%)

Query: 73  FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES---KN 129
           + +A +   +   +     +   +     ++  S   Y  AA + +E+I +YP+    ++
Sbjct: 109 YDEALKILTEIVNNGKSDAIKSLAHARIIYIYDSKKDYLNAALVSKEFIAKYPDHFLTRD 168

Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
           +    YL  ++   ++              +  + ++  +  +   + AR      +
Sbjct: 169 I----YL-NLAEYYILSGSK------DEAAEVFNEVLVNFPATRAAESARNRFNQIK 214


>gi|118581067|ref|YP_902317.1| hypothetical protein Ppro_2656 [Pelobacter propionicus DSM 2379]
 gi|118503777|gb|ABL00260.1| Tetratricopeptide TPR_2 repeat protein [Pelobacter propionicus DSM
           2379]
          Length = 568

 Score = 40.9 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 74/245 (30%), Gaps = 44/245 (17%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L     ++ C   G    S+  +   +         +Y ++ L   E  ++ A     + 
Sbjct: 8   LFCATMLSSCATFGEYAPSTPSLSSPAYDAYSRALYLYSRSRLASLEGEYALALNCLREA 67

Query: 84  SRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
               P +    +  +           G+ Q+A       I Q P  +   YV  + G+  
Sbjct: 68  IEQDPSSAFLYSAMAENKL-----KIGQVQEALENINRAIKQDPSFRE-PYV--MAGVLM 119

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE-------- 193
           A   +D           + Y+   ++   +    + A  ++ V   ++   E        
Sbjct: 120 ASAGKDT--------EAVGYLRTAIQLDPS---KEDAYLHLAVSLTRMFEYEEAVTTLKS 168

Query: 194 ------------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
                         +GR Y +   Y  A+  F+  +    +      A   +  +Y AL 
Sbjct: 169 LVKQNPESVLGYYYLGRSYSQMKLYRDAVGYFKKSIELRPEFSQ---AAIDMAASYEALG 225

Query: 242 LMDEA 246
              +A
Sbjct: 226 DYTKA 230


>gi|325111043|ref|YP_004272111.1| hypothetical protein Plabr_4518 [Planctomyces brasiliensis DSM
           5305]
 gi|324971311|gb|ADY62089.1| hypothetical protein Plabr_4518 [Planctomyces brasiliensis DSM
           5305]
          Length = 1175

 Score = 40.9 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 40/131 (30%), Gaps = 30/131 (22%)

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM-IRDV 148
              A ++ L +A     AGKY QA +  E+++  +P SK        +G +  ++ +   
Sbjct: 216 GRDAAQAQLKAARADREAGKYGQAFTRYEQFLDDFPYSKYAHEAIRELGFTRIELALTGA 275

Query: 149 PYDQRATKLMLQYM-------SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
             D       ++             + Y +                 LA     I +   
Sbjct: 276 ASDLTEATKAIEEFVDQFRQDDDFRDTYPD-----------------LARYASRIAQ--- 315

Query: 202 KRGEYVAAIPR 212
               Y  A  R
Sbjct: 316 --EAYSEASRR 324



 Score = 39.7 bits (92), Expect = 0.44,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 26/184 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS------AGKYQQAAS 115
           + A    +   + +A+  + Q   DFP++  A +++    F +        A    +A  
Sbjct: 225 KAARADREAGKYGQAFTRYEQFLDDFPYSKYAHEAIRELGFTRIELALTGAASDLTEATK 284

Query: 116 LGEEYITQYPESKNV-----DYVYY--LVGM-SYAQMIRDVPYD-QRATKLMLQYMSRIV 166
             EE++ Q+ +  +      D   Y   +   +Y++  R    D        L    R  
Sbjct: 285 AIEEFVDQFRQDDDFRDTYPDLARYASRIAQEAYSEASRRHDPDYLTVGDTALSLFERFN 344

Query: 167 ERYTNSPYVKGARFYVTVGRNQL--------AAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
               + P            R  L        A  E++     L+  E  A +  F++ +A
Sbjct: 345 SSEPDDPRRLELNQAAQSARADLLEFDVRKTALAEMDQS---LQAKEVSATLETFRVAIA 401

Query: 219 NYSD 222
            Y +
Sbjct: 402 RYPN 405


>gi|302338384|ref|YP_003803590.1| hypothetical protein Spirs_1870 [Spirochaeta smaragdinae DSM 11293]
 gi|301635569|gb|ADK80996.1| hypothetical protein Spirs_1870 [Spirochaeta smaragdinae DSM 11293]
          Length = 468

 Score = 40.9 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 22/59 (37%), Gaps = 5/59 (8%)

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
           D  YY +G  Y + +R      +  +  ++Y  +I E Y  S Y   A       R   
Sbjct: 411 DEFYYRIGRLYEETLR-----PQNPEQAVEYYRKIREAYPWSRYWNDAVKRERYLRRHF 464


>gi|229590955|ref|YP_002873074.1| putative transmembrane protein [Pseudomonas fluorescens SBW25]
 gi|229362821|emb|CAY49731.1| putative transmembrane protein [Pseudomonas fluorescens SBW25]
          Length = 579

 Score = 40.9 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 25/73 (34%), Gaps = 15/73 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCS----RDFPFAGVAR----KSLLMSAFVQY-------S 106
           ++    LK++  ++A E+F          +     A      +    A+  Y        
Sbjct: 358 QQGQYLLKKKRPAEAAEHFEDPQWQGVALYEAGNYAEAIKRFAEGNDAYSHYNRGNALAK 417

Query: 107 AGKYQQAASLGEE 119
           +G+ + A    E+
Sbjct: 418 SGELEAAIDAYEQ 430


>gi|71907189|ref|YP_284776.1| hypothetical protein Daro_1557 [Dechloromonas aromatica RCB]
 gi|71846810|gb|AAZ46306.1| hypothetical protein Daro_1557 [Dechloromonas aromatica RCB]
          Length = 429

 Score = 40.9 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 14/95 (14%), Positives = 32/95 (33%), Gaps = 16/95 (16%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           +   +A+  L     Q + D             +++++ +   ++     + E       
Sbjct: 17  LSVMLALAGLSSATAQEAVDT-----------EKLFKEGIFLREQGQVFSSIEALETVLS 65

Query: 86  DFPFAGVA-RKSLLMSAFVQYSAGKYQQAASLGEE 119
           + P    A  ++ L  A   Y A  Y QA    ++
Sbjct: 66  NNP----ALNRARLELAVAYYRALNYDQANQQAQK 96


>gi|71422459|ref|XP_812141.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70876885|gb|EAN90290.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 703

 Score = 40.9 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 25/189 (13%), Positives = 53/189 (28%), Gaps = 41/189 (21%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++ + + K+ ++ +A + ++   R  P      K+L    F       Y  A    E  +
Sbjct: 270 QRGLAYRKKGDYLRAIDEYSAALRLDPKNF---KALFNRGFCNDKVEDYNAAIRDYEAAM 326

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              P      Y Y     +Y  +           K  +    + +    N+         
Sbjct: 327 KLEPG-----YAY-----TYYNLGISYDRWGGHYKEAIAMFDKAIALDGNN--------- 367

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAY 237
                            +Y  RG     + +++  + +Y+ A        +A       Y
Sbjct: 368 ---------------ADFYHNRGFSQRKLGKYREAVKDYTMALSLDPQHFKAYYNRAFCY 412

Query: 238 VALALMDEA 246
             L     A
Sbjct: 413 DKLGEGANA 421


>gi|238897748|ref|YP_002923427.1| putative peptidase, M24 family [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|229465505|gb|ACQ67279.1| putative peptidase, M24 family [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 487

 Score = 40.9 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 31/98 (31%), Gaps = 31/98 (31%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV--------------ARKS---------- 96
           Y +A+L+ + + + KA +     S  +P                  A ++          
Sbjct: 313 YGQAILWYQNKKYDKARQILQTLSVTYPDNIWFLDLMTDIDLSQNKAAQAITRLKKARVA 372

Query: 97  -------LLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
                   L  A     AG+  QA SL   Y  ++P  
Sbjct: 373 KQHQLIWQLNLANAYIKAGESAQAVSLLRRYTFEHPND 410


>gi|145477175|ref|XP_001424610.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124391675|emb|CAK57212.1| unnamed protein product [Paramecium tetraurelia]
          Length = 644

 Score = 40.9 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 7/78 (8%)

Query: 66  LFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
             +K+Q + +A  Y N   +  P +    ++L + A+  Y    +  A  + E+ +  YP
Sbjct: 18  TLIKDQKYKEAINYLNYELQFCPKS----RALSLLAYCHYMNQDFTSAVGIYEQLVKYYP 73

Query: 126 ESKNVDYVYYLVGMSYAQ 143
             +  DY  YL   SY +
Sbjct: 74  --EIDDYKIYL-AQSYYK 88


>gi|115716503|ref|XP_001201557.1| PREDICTED: similar to Transmembrane and tetratricopeptide repeat
            containing 3 [Strongylocentrotus purpuratus]
 gi|115772610|ref|XP_788963.2| PREDICTED: similar to Transmembrane and tetratricopeptide repeat
            containing 3 [Strongylocentrotus purpuratus]
          Length = 1258

 Score = 40.9 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 42/100 (42%), Gaps = 4/100 (4%)

Query: 55   RYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
                ++Y   A++F+ +++ S A  Y+ +     P +    ++L  +A + +   +  +A
Sbjct: 1001 PPSVQLYSTLALIFMDDEDTSAALHYYQKALEIRP-SDY--QALFNTAKIHFEEERPLRA 1057

Query: 114  ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
             +  E  +  +P    +     L+G      ++D    Q+
Sbjct: 1058 KAYLETLLKHHPNHTEIVRSMLLLGEILLNSLQDEVQSQQ 1097


>gi|157128485|ref|XP_001661450.1| Anaphase Promoting Complex, putative [Aedes aegypti]
 gi|108872562|gb|EAT36787.1| Anaphase Promoting Complex, putative [Aedes aegypti]
          Length = 577

 Score = 40.9 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 38/103 (36%), Gaps = 3/103 (2%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE--KAVLFLKEQNFSKAYEYFNQ 82
             F +I     +G        + L++    +    +    KA   ++ + +S+A + F  
Sbjct: 163 LAFEAIEGLLSLGTNGIEVNTLVLNATLAPQCNDWLSNWIKAHAHMQGRKYSEAIQTFRS 222

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
              +   +    + L++     Y  G+Y+ A +  +     YP
Sbjct: 223 IEMNTSLSNY-HQLLVLVGECYYHNGEYENAYTYLKRAHNLYP 264


>gi|149019966|gb|EDL78114.1| leprecan-like 1 [Rattus norvegicus]
          Length = 540

 Score = 40.9 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 32/68 (47%), Gaps = 6/68 (8%)

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           F  Y  G+Y +A    + Y+  +P+ ++V     L  + + + + D   D  A+    + 
Sbjct: 146 FAYYRVGEYVKALECAKAYLMFHPDDQDV-----LDNVDFYESLLDDSTDP-ASIEARED 199

Query: 162 MSRIVERY 169
           ++  V+R+
Sbjct: 200 LTAFVKRH 207


>gi|145498158|ref|XP_001435067.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124402196|emb|CAK67670.1| unnamed protein product [Paramecium tetraurelia]
          Length = 596

 Score = 40.9 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 7/78 (8%)

Query: 66  LFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
             +K+Q +  A  Y N   +  P +    ++L + A+  Y    + QA ++ E+ +  YP
Sbjct: 18  TLIKDQKYKDAINYLNYELQFCPKS----RALSLLAYCHYMNQDFSQAVAIYEQLVKYYP 73

Query: 126 ESKNVDYVYYLVGMSYAQ 143
             +  DY  YL   +Y +
Sbjct: 74  --EIDDYKIYL-AQAYYK 88


>gi|91216717|ref|ZP_01253682.1| aerotolerance-related exported protein [Psychroflexus torquis ATCC
           700755]
 gi|91185186|gb|EAS71564.1| aerotolerance-related exported protein [Psychroflexus torquis ATCC
           700755]
          Length = 255

 Score = 40.9 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 26/81 (32%), Gaps = 3/81 (3%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S T      + +EKA     +  F KA + ++    +     V+ +         +    
Sbjct: 19  SYTGFSQSEDTFEKANDAFADDQFPKAVQLYSSLLDE---GLVSTELYFNLGNAYFKQND 75

Query: 110 YQQAASLGEEYITQYPESKNV 130
              A    E+ +   P  + V
Sbjct: 76  LANAIFHYEKALQLNPADQEV 96


>gi|309357426|emb|CAP35734.2| CBR-HIP-1 protein [Caenorhabditis briggsae AF16]
          Length = 238

 Score = 40.9 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 38/99 (38%), Gaps = 13/99 (13%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
           AV   +G   ++  D  ++  ++ R       KA   L   +F  A  +F       P +
Sbjct: 95  AVALPMGDSNKAPSDEDVEKASEERG------KAQEALGNGDFDAALTHFTAAIEANPGS 148

Query: 91  G--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
               A+++ ++         +   A +  ++ I+  P+S
Sbjct: 149 AMLHAKRASVLL-----KLKRPIAAIADCDKAISINPDS 182


>gi|258593613|emb|CBE69954.1| protein of unknown function [NC10 bacterium 'Dutch sediment']
          Length = 205

 Score = 40.9 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 22/143 (15%), Positives = 44/143 (30%), Gaps = 31/143 (21%)

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
            Y    +  A    ++ +   P      + +Y + MSY  +            L +Q   
Sbjct: 68  YYGRCMFHAAVDAAKKVLALDPTHP---WAHYRMAMSYFHL--------GKLDLAIQSFG 116

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
           +++                      +    + I   Y ++  +  AI  F  V++   +A
Sbjct: 117 KVLHADPTH---------------IMVHYHLGII--YERKRMWHDAIREFSQVVSENPEA 159

Query: 224 EHAEEAMARLVEAYVALALMDEA 246
             +      L  AY  L + D A
Sbjct: 160 ASSH---FHLGLAYKRLEMSDLA 179


>gi|283787827|ref|YP_003367692.1| cellulose synthase operon protein C (TPR-repeat-containing protein)
           [Citrobacter rodentium ICC168]
 gi|282951281|emb|CBG90976.1| cellulose synthase operon protein C (TPR-repeat-containing protein)
           [Citrobacter rodentium ICC168]
          Length = 1232

 Score = 40.9 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 76/210 (36%), Gaps = 24/210 (11%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
            +S+   +D +        + ++A     + N+++A E   +     P +          
Sbjct: 512 SASQRRSIDDIERGLENDRLAQQAETLESQGNWAQAAELHRRRLALDPGSVW---ITYRL 568

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVPYD 151
           A   + AG+  QA +       Q P      Y Y  YL G       +++   +    ++
Sbjct: 569 ARDLWQAGQRSQADAQMSALARQKPNDPEQVYAYGLYLSGAERDRAALAHLNALPRSQWN 628

Query: 152 QRATKLMLQY-MSRIVE---RYTNSPYVKGARFYVTVGRNQLA--AKEVEIGRYYLKRGE 205
               +L  +   ++++E   R  +S     A     + R Q A    ++ +  +  +R +
Sbjct: 629 ANIQELAERLQSNQVLETANRLRDSGKEAEAEA---LLRQQPASTRLDLTLADWAQQRRD 685

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
           Y  A   +  VLA   D     +A+  L E
Sbjct: 686 YATARGDYNRVLAREPD---NVDALLGLTE 712


>gi|147905191|ref|NP_001083459.1| hypothetical protein LOC398938 [Xenopus laevis]
 gi|38014437|gb|AAH60468.1| MGC68614 protein [Xenopus laevis]
          Length = 668

 Score = 40.9 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/115 (11%), Positives = 37/115 (32%), Gaps = 21/115 (18%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYS---AGKYQQAASL 116
           +KA     +Q +S+A E +++  +  P +     ++L    A         G +  A   
Sbjct: 357 QKANDAFAQQQWSQAIELYSEAVQRAPHS-----AMLYGNRAAAYMKRKWDGDHYDALRD 411

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
             + +   P        ++ +     ++              L+ +     ++ +
Sbjct: 412 CLQALALNPAHLK---AHFRLARCLFELH--------YVSEALECLEEFKVKFPD 455


>gi|71043726|ref|NP_001020798.1| prolyl 3-hydroxylase 2 precursor [Rattus norvegicus]
 gi|109892811|sp|Q4KLM6|P3H2_RAT RecName: Full=Prolyl 3-hydroxylase 2; AltName: Full=Leprecan-like
           protein 1; Flags: Precursor
 gi|68533818|gb|AAH99107.1| Leprecan-like 1 [Rattus norvegicus]
          Length = 703

 Score = 40.9 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 32/68 (47%), Gaps = 6/68 (8%)

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           F  Y  G+Y +A    + Y+  +P+ ++V     L  + + + + D   D  A+    + 
Sbjct: 309 FAYYRVGEYVKALECAKAYLMFHPDDQDV-----LDNVDFYESLLDDSTDP-ASIEARED 362

Query: 162 MSRIVERY 169
           ++  V+R+
Sbjct: 363 LTAFVKRH 370


>gi|42522672|ref|NP_968052.1| putative soluble lytic transglycosylase [Bdellovibrio bacteriovorus
           HD100]
 gi|39573868|emb|CAE79045.1| putative soluble lytic transglycosylase [Bdellovibrio bacteriovorus
           HD100]
          Length = 742

 Score = 40.9 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 15/108 (13%), Positives = 35/108 (32%), Gaps = 18/108 (16%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
             + KA E + +       +  A ++L  ++ + +    Y  +++L E            
Sbjct: 357 GQYDKALELYKKLYTYHLGSDEAAEALFRASLIYFRKQDYTSSSALLER----------- 405

Query: 131 DYVYYLVGMSYAQMIRDV----PYDQRATKLMLQYMSRIVERYTNSPY 174
                  G     +           +  ++   Q  + ++ERY  S Y
Sbjct: 406 ---LLQQGRDRYDLNGQYWLVRSLQESKSERAAQAAADLIERYPFSYY 450


>gi|254229962|ref|ZP_04923364.1| Tol system periplasmic component YbgF [Vibrio sp. Ex25]
 gi|262394682|ref|YP_003286536.1| TPR repeat-containing protein [Vibrio sp. Ex25]
 gi|151937531|gb|EDN56387.1| Tol system periplasmic component YbgF [Vibrio sp. Ex25]
 gi|262338276|gb|ACY52071.1| TPR repeat-containing protein [Vibrio sp. Ex25]
          Length = 250

 Score = 40.9 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 45/127 (35%), Gaps = 15/127 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            Q   D+   +R     +    +  + Y +S Y               A     +G+ Y 
Sbjct: 137 YQNAVDLILKKRDYTGAIAAFQQFQKDYPDSTYS--------------ANSHYWLGQLYF 182

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + +   A+  F  V+ +Y D+    +A+ +L E         +A++    + + YP   
Sbjct: 183 AKKQDKDAVKSFAAVV-SYKDSNKRADALLKLGEIAERNNNAAQAKKYYQQVVDEYPGSA 241

Query: 262 WARYVET 268
            A+   +
Sbjct: 242 SAKLASS 248



 Score = 39.7 bits (92), Expect = 0.38,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 41/124 (33%), Gaps = 23/124 (18%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               Y  A +  +++   YP+S      +Y +G  Y    +D        K  ++  + +
Sbjct: 146 KKRDYTGAIAAFQQFQKDYPDSTYSANSHYWLGQLYFAKKQD--------KDAVKSFAAV 197

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           V  Y +S     A   +       A +     +          A   +Q V+  Y  +  
Sbjct: 198 VS-YKDSNKRADALLKLGEI----AERNNNAAQ----------AKKYYQQVVDEYPGSAS 242

Query: 226 AEEA 229
           A+ A
Sbjct: 243 AKLA 246


>gi|68472197|ref|XP_719894.1| hypothetical protein CaO19.6798 [Candida albicans SC5314]
 gi|68472432|ref|XP_719777.1| hypothetical protein CaO19.14090 [Candida albicans SC5314]
 gi|46441609|gb|EAL00905.1| hypothetical protein CaO19.14090 [Candida albicans SC5314]
 gi|46441735|gb|EAL01030.1| hypothetical protein CaO19.6798 [Candida albicans SC5314]
          Length = 1080

 Score = 40.9 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 38/130 (29%), Gaps = 25/130 (19%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGK 109
           D       Y    + +   +F+ AYE F Q        P              + Y   +
Sbjct: 359 DQSDAHSWYYLGRVEMIRGDFTAAYEAFQQAVNRDARNP-TFWC-----SIGVLYYQISQ 412

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSY---AQMIRDVPYDQRATKLMLQYMSRIV 166
           Y+ A       I   P    +  V+Y +G  Y      I D           L    +  
Sbjct: 413 YRDALDAYTRAIRLNP---YISEVWYDLGTLYETCNNQISD----------ALDAYRQAE 459

Query: 167 ERYTNSPYVK 176
               N+P++K
Sbjct: 460 RLDPNNPHIK 469


>gi|320159496|ref|YP_004172720.1| hypothetical protein ANT_00860 [Anaerolinea thermophila UNI-1]
 gi|319993349|dbj|BAJ62120.1| hypothetical protein ANT_00860 [Anaerolinea thermophila UNI-1]
          Length = 457

 Score = 40.9 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 19/121 (15%), Positives = 35/121 (28%), Gaps = 11/121 (9%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
            ALT+     V  L G + Q    ++L + T  R       +     +  N   A E + 
Sbjct: 19  LALTVILLAMVAVLRGLQTQQIEPLFLPTPTPTRTSNSYALEGQTHFQAGNLKGAIEAYQ 78

Query: 82  QCSRDFPFAG--VARKSLLMSAFVQY-------SAGKYQQAASLGEEYITQYPESKNVDY 132
           Q  +  P         + +   +             +  +A       +   PE  +  Y
Sbjct: 79  QALQSEPSNARIWMELAQI-QTYSYKSLTTREAQRQRLAEAIESANRAVELAPEDSSA-Y 136

Query: 133 V 133
            
Sbjct: 137 A 137


>gi|218245568|ref|YP_002370939.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC
           8801]
 gi|218166046|gb|ACK64783.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8801]
          Length = 784

 Score = 40.9 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 42/109 (38%), Gaps = 12/109 (11%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
             + +A +   +  +  P   V   +L    F+     +Y+QA S  +E +   P  +N 
Sbjct: 663 GEYQEALKSCIKAIKLKPHKEVKEITLANKGFILMKLERYKQALSTFKEVLKLNPNHQN- 721

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
             V Y +   Y+         Q  T   ++Y+ + ++      Y+  A+
Sbjct: 722 --VLYKIACCYSL--------QNNTGQAIKYLKQAIKLKPE-KYINLAK 759


>gi|124005360|ref|ZP_01690201.1| tetratricopeptide repeat domain protein [Microscilla marina ATCC
           23134]
 gi|123989182|gb|EAY28760.1| tetratricopeptide repeat domain protein [Microscilla marina ATCC
           23134]
          Length = 255

 Score = 40.9 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 45/133 (33%), Gaps = 19/133 (14%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS--AFVQYSAGKYQQAASLGEEY 120
             V +LK+  F +A  Y  +    F  + +  ++   S  A       +Y +A    ++ 
Sbjct: 138 TGVAYLKQGKFQEAINYLEE----FSTSDLLVQARAYSLVADAYQELKQYDKAILNYKKA 193

Query: 121 ITQYPESKNVDYVYYLV-GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           I   P        Y +   + Y    +         K  +    R+++ Y N+     A+
Sbjct: 194 IDHEPNKFFTP-PYLMKLALVYELQNK--------PKAAIATYERLLKDYPNASDANNAK 244

Query: 180 FYVTVGRNQLAAK 192
            Y       LA K
Sbjct: 245 KYKGKL---LAQK 254


>gi|325959562|ref|YP_004291028.1| hypothetical protein Metbo_1834 [Methanobacterium sp. AL-21]
 gi|325330994|gb|ADZ10056.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
           sp. AL-21]
          Length = 693

 Score = 40.9 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 64/189 (33%), Gaps = 31/189 (16%)

Query: 33  CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
             ++G   ++ +   + ++ D       +   ++ +++ N+ +A + F+        +  
Sbjct: 482 LMMLGRADEALKSYEMVTLMDPENYEAFHLTGLINMEQGNYDEALKNFDAVLNI---SPD 538

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
               L+          K ++A    +E +    ES NV+      G++   M     +D 
Sbjct: 539 NIDVLINKGQAYGFMDKPEKALEYFDEALDL--ESDNVE-ALNYRGVALKHMG---DHD- 591

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
                 ++    ++E    +P+                    +IG  Y + GEY  AI  
Sbjct: 592 ----ASIKTFEAVLEMEPENPWAWH-----------------QIGLNYKEVGEYEKAIES 630

Query: 213 FQLVLANYS 221
           F   L    
Sbjct: 631 FDNALDEDP 639


>gi|323449239|gb|EGB05129.1| hypothetical protein AURANDRAFT_59408 [Aureococcus anophagefferens]
          Length = 473

 Score = 40.9 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 39/142 (27%), Gaps = 39/142 (27%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG-----VARKSLLMSAFVQYSAGKYQQA 113
           E+  +    L   ++S+A                     + +++         A  Y  A
Sbjct: 5   ELKTQGNEALAAGHYSQA-------PSR-STGRTMRVLYSNRAM-----AHIKAESYGLA 51

Query: 114 ASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            S  E  I   P      Y   YY  G +   +           +L L+    + +   +
Sbjct: 52  ISDAEAAIRIDPT-----YIKAYYRRGSANFAL--------GKYRLALRDFKAVCKLRPS 98

Query: 172 SPYVKGARFYVTVG---RNQLA 190
                 AR  +        QLA
Sbjct: 99  DR---DARTKLKECEKAVKQLA 117


>gi|323256482|gb|EGA40214.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
          Length = 75

 Score = 40.9 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 8/82 (9%)

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
            Y+ GK   AA      +  YP+S       Y VG+        +  D+  T        
Sbjct: 2   NYNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGV--------IMQDKGDTAKAKAVYQ 53

Query: 164 RIVERYTNSPYVKGARFYVTVG 185
           +++ +Y  +   K A+  +   
Sbjct: 54  QVINKYPGTDGAKQAQKRLNAM 75


>gi|313203636|ref|YP_004042293.1| hypothetical protein [Paludibacter propionicigenes WB4]
 gi|312442952|gb|ADQ79308.1| Tetratricopeptide TPR_1 repeat-containing protein [Paludibacter
           propionicigenes WB4]
          Length = 250

 Score = 40.9 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 31/112 (27%), Gaps = 21/112 (18%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +  L I    A   L                     Q +   +A     + +++ A +
Sbjct: 1   MKRIILFISILTAFSSL------------------TMAQSDAVSQANNLYTKGDYTSAAK 42

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
            +     +    GVA +         Y + +  ++    E  +   P   + 
Sbjct: 43  QYETILSNQ---GVAPELYFNLGNAYYKSNEIGRSILNYERALRLSPSYDDA 91


>gi|268316401|ref|YP_003290120.1| Tetratricopeptide TPR_4 [Rhodothermus marinus DSM 4252]
 gi|262333935|gb|ACY47732.1| Tetratricopeptide TPR_4 [Rhodothermus marinus DSM 4252]
          Length = 929

 Score = 40.9 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 22/51 (43%)

Query: 73  FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           F+KA E   +  R +P +  A  +L++     +  G Y  AA    E I  
Sbjct: 68  FNKAIEKSAEVVRRYPGSKWADDALMLIGQSYFYLGNYAGAAQKFREVIAL 118



 Score = 38.9 bits (90), Expect = 0.70,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 16/98 (16%)

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
           A    ++  + +V RY  S +   A               + IG+ Y   G Y  A  +F
Sbjct: 67  AFNKAIEKSAEVVRRYPGSKWADDAL--------------MLIGQSYFYLGNYAGAAQKF 112

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
           + V+A         EA   L  + VA    DEA+ V+ 
Sbjct: 113 REVIAL--GGAKELEARFWLARSLVAARSFDEAQTVLQ 148



 Score = 35.5 bits (81), Expect = 8.9,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA-LMDEAREVVSLIQ 254
            +  AI +   V+  Y  ++ A++A+  + ++Y  L      A++   +I 
Sbjct: 67  AFNKAIEKSAEVVRRYPGSKWADDALMLIGQSYFYLGNYAGAAQKFREVIA 117


>gi|91202529|emb|CAJ72168.1| hypothetical protein kustd1423 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 300

 Score = 40.9 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 18/136 (13%), Positives = 37/136 (27%), Gaps = 32/136 (23%)

Query: 70  EQNFSKAYEYFNQCSR----------------DFPFAGVARKSLLMSAFVQYSAGKYQQA 113
            +NF  A     +                    +          +  A   Y+ G+Y++A
Sbjct: 152 SKNFEDAVPQKEEVDASVEDGEERARMHNRLHRYLTGIEKETPPITIAECFYTLGEYEKA 211

Query: 114 ASLGEEYITQYPESKNVDY----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
               +  I   P+     Y      Y +     + ++            L    R ++  
Sbjct: 212 LQGYKN-I---PQEAVTPYQYMWARYQIANC-FRQLKKYD-------DALNEFQRFIDEN 259

Query: 170 TNSPYVKGARFYVTVG 185
             S  +  A++YV   
Sbjct: 260 PKSELIVQAKWYVDDI 275


>gi|163847233|ref|YP_001635277.1| protein-glutamate O-methyltransferase [Chloroflexus aurantiacus
           J-10-fl]
 gi|222525074|ref|YP_002569545.1| MCP methyltransferase, CheR-type with Tpr repeats [Chloroflexus sp.
           Y-400-fl]
 gi|163668522|gb|ABY34888.1| Protein-glutamate O-methyltransferase [Chloroflexus aurantiacus
           J-10-fl]
 gi|222448953|gb|ACM53219.1| MCP methyltransferase, CheR-type with Tpr repeats [Chloroflexus sp.
           Y-400-fl]
          Length = 472

 Score = 40.9 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 31/92 (33%), Gaps = 8/92 (8%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKYQQAA 114
            +  V ++    ++      A E F +     P     A   L ++A    + G    A 
Sbjct: 307 TEEAVVQEGRQLIENGQIDTALELFARV----PLAGRHAPMVLALAAQAHANRGDLDLAL 362

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
           +     +   P    +   Y L+G+ Y +  +
Sbjct: 363 AEARRALELNPL---LTEAYLLLGLIYERQQQ 391


>gi|330790060|ref|XP_003283116.1| hypothetical protein DICPUDRAFT_146705 [Dictyostelium purpureum]
 gi|325086983|gb|EGC40365.1| hypothetical protein DICPUDRAFT_146705 [Dictyostelium purpureum]
          Length = 803

 Score = 40.5 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 71/240 (29%), Gaps = 35/240 (14%)

Query: 14  AWAYQLYKFALTIFFSIAVCFL-VGWERQSSRDVYLDSVTDVRYQ-REVYEKAVLFLKEQ 71
              + +   A+  F  ++   L V   +    D  +       YQ  +  E+    +   
Sbjct: 379 LKTFNITAIAMMFFIIVSAILLPVMLTKYLKSDTEISEYKFNLYQYNQYMEEGKKNIGLG 438

Query: 72  NFSKAYEYFNQC--------SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
            F+ A   + +            +       K +  S +     G Y +A  + E YI  
Sbjct: 439 QFNDAKVSYERALNVSKLLDKDQYILDSY--KGIFDSVYS---GGNYNEALVIAESYIAV 493

Query: 124 YPESKNVDYVYY--LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
            P S     + Y  + GM +    +  P               +V +YT   Y   +   
Sbjct: 494 SPTSI-TAQLQYHQMRGMVFFNTGKLQPCIDE---------RLLVVKYTKQIYQNNS--- 540

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
                NQ A  +V +G  Y + G Y  AI  + +    Y               +   L 
Sbjct: 541 -----NQEAYSQVGVGTCYAEHGRYQDAIKYYTIAFNIYQTMNSTYRDKYYYAASLFHLG 595


>gi|300871059|ref|YP_003785931.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000]
 gi|300688759|gb|ADK31430.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000]
          Length = 653

 Score = 40.5 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 35/235 (14%), Positives = 73/235 (31%), Gaps = 57/235 (24%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQC------------SRDFPFAGVARKSLLMSAFVQYSA 107
           ++  A      ++++ +  Y+N+                  ++       +      Y+ 
Sbjct: 291 LFNSAYQSDNNKDYNSSINYYNKIIEMINNLLKKYDKNSEEYSKYKNNISI----AYYNI 346

Query: 108 G-------KYQQAASLGEEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLML 159
           G       +Y++A    ++ I   P     DY  Y   G++   +           K  +
Sbjct: 347 GIVKNNLKQYKEAIEDYDKAIELNPN----DYMAYNNRGVAKMNL--------GQYKEAI 394

Query: 160 QYMSRIVERYTNSP--YVKGARFYVTVGRNQLAAKEVEIG--------RYYLKR------ 203
           +   + +E   NS   Y         +G N+ A ++ +            Y  R      
Sbjct: 395 KDFDKSIELSQNSSETYNNRGNVKANLGLNKEAIEDYDKAIELNPNNSSAYNNRGISKSD 454

Query: 204 -GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQER 256
            G Y  AI  F   +    ++    EA +    A   L   +EA ++    I+  
Sbjct: 455 LGLYKEAIKDFDKAIELNPNSS---EAYSNRGNAKSDLNQYEEAIKDYNKAIELN 506


>gi|302307175|ref|NP_983751.2| ADL344Wp [Ashbya gossypii ATCC 10895]
 gi|299788873|gb|AAS51575.2| ADL344Wp [Ashbya gossypii ATCC 10895]
          Length = 910

 Score = 40.5 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 43/142 (30%), Gaps = 22/142 (15%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108
            D       Y    + +   +++ AY+ F Q        P              + Y   
Sbjct: 307 ADSTDATTWYHLGRIHMVRNDYTAAYDAFQQAVNRDSRNP-TFWC-----SIGVLYYQIS 360

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +Y+ A       I   P    +  V+Y +G +  +   +   D       L    + V  
Sbjct: 361 QYRDALDAYTRAIRLNP---YISEVWYDLG-TLYETCNNQLSD------ALDAYKQAVRL 410

Query: 169 YTNSPYVKGARFYVTVGRNQLA 190
             N+ +++     +     QLA
Sbjct: 411 DPNNVHIRE---RLEALTAQLA 429


>gi|301111123|ref|XP_002904641.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase,
           putative [Phytophthora infestans T30-4]
 gi|262095958|gb|EEY54010.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase,
           putative [Phytophthora infestans T30-4]
          Length = 579

 Score = 40.5 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 60/220 (27%), Gaps = 42/220 (19%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
            D       D      +Y + +   +  ++  A   F +     P             F 
Sbjct: 278 EDYTQALKMDPHNAFALYNRGISLDRSGDYQGALTDFTRAIELLPTNA---DFYHNRGFC 334

Query: 104 QYSAGKYQQAASLGEEYITQYPESK----NVDYVY------------YLVGM------SY 141
               G ++ A +     I   P       N  Y Y            Y   +      + 
Sbjct: 335 HRKQGNFELAIADYSRAIEFNPNHFKSLYNRAYSYDKLGRYQEAAQDYTAALRVEPENAN 394

Query: 142 AQMIRDVPYD-QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI---- 196
           A   R   YD  R T   +    R +     S     +R    +  +QL   +  +    
Sbjct: 395 AYHNRGSTYDKMRDTTRAIADFDRAIALQPRSVSSYNSR---GLCYDQLGRHQEALQDFA 451

Query: 197 ---------GRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
                      +Y  RG  +  + RF+  + +YS A   E
Sbjct: 452 LALTLDPRSAVFYHNRGYCLRNMGRFEEAVQDYSSALALE 491


>gi|219847306|ref|YP_002461739.1| tetratricopeptide repeat-containing protein [Chloroflexus aggregans
            DSM 9485]
 gi|219541565|gb|ACL23303.1| Tetratricopeptide TPR_2 repeat protein [Chloroflexus aggregans DSM
            9485]
          Length = 1424

 Score = 40.5 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 64/226 (28%), Gaps = 44/226 (19%)

Query: 51   VTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDF--PFAGVARKSLLMSAFVQY 105
                     ++  A+L   + +++ A   +            P       SL   A++  
Sbjct: 856  PDHPDTAASLHNLALLLASQGDYAAARPLYERALAIRERALGPDHPDTATSLDNLAYLLQ 915

Query: 106  SAGKYQQAASLGEEYI-----TQYPESKNV---------------DYV----YYLVGMSY 141
              G Y  A  L E  +        P+                   DY      Y   ++ 
Sbjct: 916  QQGDYAAARPLYERALAIRERALGPDHPQTATSLHNLALLLASQGDYAAARPLYERALAI 975

Query: 142  AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL--------AAKE 193
            ++      +   AT   L  ++ ++E   +    +         R +         A   
Sbjct: 976  SERALGPDHPDTAT--SLNNLALLLESQGDDAAARPLYERALAIRERALGPDHPDTATSL 1033

Query: 194  VEIGRYYLKRGEYVAAIPRFQLVLANY-----SDAEHAEEAMARLV 234
              + R    +G+Y AA P ++  LA Y      D      ++  L 
Sbjct: 1034 HNLARLLYHQGDYAAARPLYERALAIYERALGPDHPQTATSLNNLA 1079


>gi|196228021|ref|ZP_03126888.1| hypothetical protein CfE428DRAFT_0052 [Chthoniobacter flavus
           Ellin428]
 gi|196227424|gb|EDY21927.1| hypothetical protein CfE428DRAFT_0052 [Chthoniobacter flavus
           Ellin428]
          Length = 254

 Score = 40.5 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 22/58 (37%), Gaps = 2/58 (3%)

Query: 71  QNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
           ++F+KA       +  F    +  A+ +  M      +     +A +   ++ T YP 
Sbjct: 91  KDFNKALTLLKAVTAKFKGMPSTWAQHATGMLGDTYIALNDISKAEAAYNDFKTLYPN 148


>gi|146422522|ref|XP_001487198.1| hypothetical protein PGUG_00575 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 529

 Score = 40.5 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 22/159 (13%), Positives = 44/159 (27%), Gaps = 33/159 (20%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQ 111
           V    ++ ++     K   F +A E + +     P      + ++ +           Y 
Sbjct: 3   VAEAVKLKDEGNEHFKAHRFDEAIESYTKAIEVDPKNAVFYSNRAQV-----HIKLENYG 57

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            A    +E +   P        YY  G++   +++         K        I++   N
Sbjct: 58  LAIIDCDEALKVDPSFTK---AYYRKGVAQMAILK--------YKEAQANFKTILKTLPN 106

Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
                          N            YLK+  +  AI
Sbjct: 107 DKLTLENYK---QCVN------------YLKKQAFEKAI 130


>gi|115358177|ref|YP_775315.1| TPR repeat-containing protein [Burkholderia ambifaria AMMD]
 gi|115283465|gb|ABI88981.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria
           AMMD]
          Length = 285

 Score = 40.5 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 33/100 (33%), Gaps = 4/100 (4%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
                 + F+  +  L G      +     S      Q E+   A   L   N   A   
Sbjct: 3   RSVIRALAFAAVLPVLAGGCAPGIQTRAALSHKSDDPQAEL-RIADSALSGGNVELASTL 61

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           + +     P + +A  + L    V Y AG  ++A  L E+
Sbjct: 62  YGKVLARHPDS-LA--AQLGLGDVNYRAGDLERARILYEQ 98


>gi|322434170|ref|YP_004216382.1| cell wall hydrolase/autolysin [Acidobacterium sp. MP5ACTX9]
 gi|321161897|gb|ADW67602.1| cell wall hydrolase/autolysin [Acidobacterium sp. MP5ACTX9]
          Length = 818

 Score = 40.5 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 26/82 (31%), Gaps = 9/82 (10%)

Query: 46  VYLDSVTDVRYQREVY-------EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
           +Y  +  D      +Y       E+      E +   A   F    + +P +G+   +LL
Sbjct: 66  IYHSNPADGHAPDAIYAVAELLAEQGRELHDEGSLRAAVAQFEFLRKQYPGSGLRTNALL 125

Query: 99  MSAFVQYSAGKYQQAASLGEEY 120
               +         AA   E +
Sbjct: 126 AEGRI--DETDLGDAAGAKERF 145


>gi|262065894|ref|ZP_06025506.1| conserved hypothetical protein [Fusobacterium periodonticum ATCC
           33693]
 gi|291380374|gb|EFE87892.1| conserved hypothetical protein [Fusobacterium periodonticum ATCC
           33693]
          Length = 438

 Score = 40.5 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 18/43 (41%)

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
            E    +  +Y  L    E  + + L+++ +P   W +  E L
Sbjct: 391 PEIYYNIASSYAKLGNRAEVTKYIRLLKQEFPNNSWTKKSEAL 433


>gi|209527035|ref|ZP_03275551.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
 gi|209492546|gb|EDZ92885.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
          Length = 1038

 Score = 40.5 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 74/203 (36%), Gaps = 16/203 (7%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           +++    E      R       ++ + +  A    +  +  QA  +  E + +YP++  +
Sbjct: 142 KDWQAIIEELETI-RQTENPKFSQNNYVSLAEAYRNNQQLAQAEFVAIEGLKKYPKNAKI 200

Query: 131 D--YVYYLVGMSYAQMIRDVPYDQR----ATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
              Y   L+ ++    I      ++      +   +   R+++ Y NS  ++ A      
Sbjct: 201 QNQYA--LIALAQENWIVASERLEKLLEMEAQKNWRTYYRLIQAYRNSEQLEKAELIAVK 258

Query: 185 GRNQLAAKEVE--IGRYY----LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
           G  +     +   I + Y    L + ++   I + Q +L      +  EE  A LV AY 
Sbjct: 259 GIQKYTNYPMFSTIQKEYCLIPLGQKDWGEEIEKLQGLLE-MQGQKAHEEVYADLVAAYS 317

Query: 239 ALALMDEAREVVSLIQERYPQGY 261
           A     +A  + +    +YP   
Sbjct: 318 ASQQFQKAERLATEGLHKYPNSS 340


>gi|254416035|ref|ZP_05029791.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC
           7420]
 gi|196177210|gb|EDX72218.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC
           7420]
          Length = 762

 Score = 40.5 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 51/162 (31%), Gaps = 14/162 (8%)

Query: 30  IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
           +    L G    +     + +V        V  +A   L +     A   F    R +P 
Sbjct: 4   LIGLGLAGLAISTPMVYTIPAVHAQTVPTAV-RQAFSLLSQGRVQDAIAAFEAAVRRYPD 62

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +     + L  A      G  QQA +  ++ + Q P ++       L  +      R   
Sbjct: 63  S---LDAKLGLAIAHRRQGNLQQAWNAYQQVLAQDPTNELA-----LKSVGLFGTYRSEW 114

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
             Q      ++ ++ ++    N    +G R  +   + + A 
Sbjct: 115 QVQG-----IEALTTLLNLNPNDIEARGLRAQLYGFQQRFAE 151


>gi|56751970|ref|YP_172671.1| soluble lytic transglycosylase [Synechococcus elongatus PCC 6301]
 gi|56686929|dbj|BAD80151.1| probable soluble lytic transglycosylase [Synechococcus elongatus
           PCC 6301]
          Length = 690

 Score = 40.5 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 64/184 (34%), Gaps = 31/184 (16%)

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           E + Q    +P + V  +++L         G++  A +  + +   YP S  +       
Sbjct: 133 ETWRQLLNTYPESPVQAEAVLAL-------GQWDLAPATIQRWPR-YPASNELA------ 178

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
                Q+ +  P + +   L +    R   R+     +      +    N  A    +I 
Sbjct: 179 ----RQLAKRQPAEAKRWLLQIAQFGRY--RF----DIDAVLSELQALPNLTARDRQQIA 228

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
             Y +R +Y  A          Y+ +   +E + R   +    +  + AR +   + +R+
Sbjct: 229 DAYWQRDDYATAA-------DLYARSPQTDETLYRQARSLDLTSQPEVARTLYQQLLQRF 281

Query: 258 PQGY 261
           PQ  
Sbjct: 282 PQSP 285



 Score = 40.1 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 27/86 (31%), Gaps = 15/86 (17%)

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
            A   +    Y  AA         Y  S   D   Y    S      D+       + + 
Sbjct: 227 IADAYWQRDDYATAAD-------LYARSPQTDETLYRQARSL-----DLTSQPEVARTLY 274

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVG 185
           Q   ++++R+  SP  + A  ++   
Sbjct: 275 Q---QLLQRFPQSPERERALVHLVRL 297


>gi|317060755|ref|ZP_07925240.1| predicted protein [Fusobacterium sp. D12]
 gi|313686431|gb|EFS23266.1| predicted protein [Fusobacterium sp. D12]
          Length = 409

 Score = 40.5 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 3/70 (4%)

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEA--MARLVEAYVALALMDEAREVVSLIQERY 257
           Y   G Y  +I  FQ VL +       + A    +L  AY  +    E ++ +SL++ERY
Sbjct: 334 YYGLGNYQQSIEYFQKVLTH-KGVSAEKRAEVYYKLASAYNKVGEKREYKKYLSLLKERY 392

Query: 258 PQGYWARYVE 267
               W +  +
Sbjct: 393 ANTLWGKKAQ 402


>gi|218461258|ref|ZP_03501349.1| hypothetical protein RetlK5_17827 [Rhizobium etli Kim 5]
          Length = 110

 Score = 40.5 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 38/104 (36%), Gaps = 14/104 (13%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
             Q  ++ + RY +S     A F++                    +G+Y  A   F    
Sbjct: 5   AEQEFNQYIARYPSSARAADANFWLGEAL--------------YSQGKYNEAAKTFLNAH 50

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             Y  +E A E + +L  +  AL   + A   +  + +RYP+  
Sbjct: 51  QKYGSSEKAPEMLLKLGMSLAALDNKETACATLREVSKRYPKAS 94



 Score = 35.5 bits (81), Expect = 8.9,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 38/103 (36%), Gaps = 14/103 (13%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP---ESK 128
           ++  A + FNQ    +P +  A  +        YS GKY +A    + ++  +     S+
Sbjct: 1   DYGTAEQEFNQYIARYPSSARAADANFWLGEALYSQGKYNEA---AKTFLNAHQKYGSSE 57

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
               +   +GMS A +           +     +  + +RY  
Sbjct: 58  KAPEMLLKLGMSLAALDNK--------ETACATLREVSKRYPK 92


>gi|332706444|ref|ZP_08426505.1| methyl-accepting chemotaxis protein [Lyngbya majuscula 3L]
 gi|332354328|gb|EGJ33807.1| methyl-accepting chemotaxis protein [Lyngbya majuscula 3L]
          Length = 1019

 Score = 40.5 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 36/96 (37%), Gaps = 6/96 (6%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ-YSAGKYQQAASLG 117
           ++Y +A     +  + +A    ++   DFP       +LL+   +  Y   +Y  A    
Sbjct: 9   QLYGEAEKAYMQGKYQEAATLVDRLIEDFPNEP---SALLLRGHIYCYGLQQYDLARQQY 65

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
           E  +    E   V+Y     G+ YAQ   +   D  
Sbjct: 66  ESVLNLTSEPDFVNYANN--GLEYAQQSTNGHQDPG 99


>gi|298250743|ref|ZP_06974547.1| transcriptional regulator, XRE family [Ktedonobacter racemifer DSM
           44963]
 gi|297548747|gb|EFH82614.1| transcriptional regulator, XRE family [Ktedonobacter racemifer DSM
           44963]
          Length = 850

 Score = 40.5 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 69/226 (30%), Gaps = 47/226 (20%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ--------CSRDFPFAGVARKSLLM-SA 101
                    ++  AVL+ K   +++A     +           D P   VA    L   A
Sbjct: 520 PDHYETASVLHNLAVLYWKMGKYAEAEPLLQRALLIRGKTLDMDHP--DVAT--TLNYLA 575

Query: 102 FVQYSAGKYQQAASLGEEYIT-----QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
            + +  GKY +A  L +  +        P+  N+ Y    + + YA+        Q    
Sbjct: 576 LLYWKMGKYAEAEPLLQRALHIWEQALNPDHPNIAYPLNNLAILYAE--------QGKYA 627

Query: 157 LMLQYMSRIVERYTN---SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
                  R +  +     S +   A+       N LA   +        + +Y  A   +
Sbjct: 628 EAEPLFQRALHIWEQSKGSEHPDVAQA----LHN-LAELSLI-------QEKYAEAESLY 675

Query: 214 QLVL-----ANYSDAEHAEEAMARLVEAYVALALMDEARE-VVSLI 253
           Q VL     A+  D     E +  L   Y       EA      ++
Sbjct: 676 QRVLHLRVQAHGPDHPSVAETLNSLATLYQNQGKFAEAEALYQRVL 721


>gi|257463163|ref|ZP_05627563.1| hypothetical protein FuD12_04856 [Fusobacterium sp. D12]
          Length = 407

 Score = 40.5 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 3/70 (4%)

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEA--MARLVEAYVALALMDEAREVVSLIQERY 257
           Y   G Y  +I  FQ VL +       + A    +L  AY  +    E ++ +SL++ERY
Sbjct: 332 YYGLGNYQQSIEYFQKVLTH-KGVSAEKRAEVYYKLASAYNKVGEKREYKKYLSLLKERY 390

Query: 258 PQGYWARYVE 267
               W +  +
Sbjct: 391 ANTLWGKKAQ 400


>gi|34541238|ref|NP_905717.1| batE protein [Porphyromonas gingivalis W83]
 gi|34397554|gb|AAQ66616.1| batE protein [Porphyromonas gingivalis W83]
          Length = 302

 Score = 40.5 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 40/123 (32%), Gaps = 8/123 (6%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREV--YEKAVLFLKEQNFSKAYEYFNQC--SRD 86
           +V   V     ++ +V  +S  D     ++   E+       + + +A   + +      
Sbjct: 38  SVFLPVDSSSIATSEVETESAADSSATGKILSAEEIRRLFDAKQYGRAATAYERILRETA 97

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
            P A +    L       Y +G+   +  + E      P  K++     + G+     I 
Sbjct: 98  QPDASL----LYNLGCCYYKSGEVALSILMFERAYRLAPNDKDIRVNLEMAGLKAFDKIS 153

Query: 147 DVP 149
           D  
Sbjct: 154 DSE 156


>gi|296105261|ref|YP_003615407.1| cellulose synthase subunit BcsC [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295059720|gb|ADF64458.1| cellulose synthase subunit BcsC [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 1160

 Score = 40.5 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 84/230 (36%), Gaps = 24/230 (10%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +       ++  +A     +  +++A E   +     P          
Sbjct: 444 SLSASQRRSIDDIERSLTNEQLSAQAEQLENQGKYAQAAEVQRRRLALSPGDVW---ITY 500

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV--YYLVG-------MSYAQMIRDVP 149
             +   YSAG+  QA +L  +  +Q P   +  Y    YL G       +++ + +    
Sbjct: 501 RLSRDLYSAGQRSQADTLMRQLASQKPTDPDQVYANGLYLSGNDQDRAALAHLETLPRSQ 560

Query: 150 YD---QRAT-KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA--AKEVEIGRYYLKR 203
           ++   Q    +L    +     R  +S   + A     + R Q A    ++ +  +  +R
Sbjct: 561 WNGNIQELADRLQSNQVLDTANRLRDSGKEQEAE---NLLRQQPASTRIDLTLADWAQQR 617

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           G+  AA   +  VL         E+A+  L E Y A    D AR  ++ +
Sbjct: 618 GDLSAAKTAYSGVL---QREPQNEDAILGLTEIYSAQGDKDAARAELAKL 664


>gi|294507615|ref|YP_003571673.1| Conserved hypothetical protein containing TPR domain [Salinibacter
           ruber M8]
 gi|294343942|emb|CBH24720.1| Conserved hypothetical protein containing TPR domain [Salinibacter
           ruber M8]
          Length = 681

 Score = 40.5 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 34/262 (12%), Positives = 77/262 (29%), Gaps = 38/262 (14%)

Query: 21  KFALTIFFSIAVCFLVGWE---RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           + A  +   +    L+G       S   ++  + T     R +  +     +  ++ +A 
Sbjct: 101 RLAPPLGAVLLCTLLMGGPPPTVASPAVLFPSADTTSPRARRLLIQGTTEAQLGDYEEAI 160

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
            +F       P    A   LL  A    + G    A        TQ   S          
Sbjct: 161 SHFEAALEQVP---EAPVLLLALADAHEAQGALSTALFYARRAQTQ--GSPRP------- 208

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV----GRNQLAAKE 193
             S  + + ++          L+   ++++   N+     AR  +       +  + + E
Sbjct: 209 --SPYRRLAEMQRAAGDPAAALRTYQQLLDHVPNANDAHRARAAIQADLGRTKGAIQSYE 266

Query: 194 VEIGR--------------YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           + + R               Y K G+        + ++         +    RL E Y  
Sbjct: 267 IYLQRADSPPIDVYRRLLSLYRKTGDKDGVETTLRTLVERRPTVRSYQR---RLGEYYAD 323

Query: 240 LALMDEAREVVSLIQERYPQGY 261
                +A  +++ +  ++P   
Sbjct: 324 EGRPRKALALLAPLGRQFPNDE 345


>gi|162449215|ref|YP_001611582.1| soluble lytic murein transglycosylase [Sorangium cellulosum 'So ce
           56']
 gi|161159797|emb|CAN91102.1| soluble lytic murein transglycosylase [Sorangium cellulosum 'So ce
           56']
          Length = 865

 Score = 40.5 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 60/190 (31%), Gaps = 26/190 (13%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           R    +Y      L+    ++A   F    +++P   +A  +  + A      G   Q  
Sbjct: 404 RRPETLYNAGRASLRVDRHAEAAARFALLEKEYPDHRLADDARYLGARALLGLGDQAQFV 463

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
            L       YP    V    + + +   +M R            ++ + R +ER+     
Sbjct: 464 QLLTAMPDDYPSGDMVADGLFELAL--FEMERG------DWAGAVRPLERALERFP-HER 514

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
              A   +             +GR +++ G         + V+ +Y  +         + 
Sbjct: 515 AYHAAGRLPY----------YLGRAHIETGSPDKGKALLEQVIRDYPLS-------FYMA 557

Query: 235 EAYVALALMD 244
            ++  LA +D
Sbjct: 558 LSHARLADVD 567



 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 38/102 (37%), Gaps = 12/102 (11%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQ 104
           D  +       ++E A+  ++  +++ A     +    FP    A  +     +      
Sbjct: 472 DYPSGDMVADGLFELALFEMERGDWAGAVRPLERALERFPHER-AYHAAGRLPYYLGRAH 530

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
              G   +  +L E+ I  YP S      +Y+  +S+A++  
Sbjct: 531 IETGSPDKGKALLEQVIRDYPLS------FYM-ALSHARLAD 565


>gi|91226890|ref|ZP_01261487.1| putative heat shock protein [Vibrio alginolyticus 12G01]
 gi|269966530|ref|ZP_06180613.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|91188853|gb|EAS75138.1| putative heat shock protein [Vibrio alginolyticus 12G01]
 gi|269828874|gb|EEZ83125.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 391

 Score = 40.5 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 24/184 (13%), Positives = 56/184 (30%), Gaps = 30/184 (16%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A  ++      +A + F Q   +  +   A +  L++ +      ++++A     +    
Sbjct: 114 AKDYMVSGFLDRAEKIFEQLVEEPDYKEAALQ-QLVTIY--QQTREWEKAIYYANQLAKL 170

Query: 124 YPESKNVDYVYYLVG-MSYA-QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              +K       +   +++    I  +      T   +Q+  + +           A   
Sbjct: 171 --GNKRSR----MRANIAHFWCEIAMLDQADGNTNKAIQHFKKALAEDPKCVRASIALGR 224

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
           +                 YL+  +Y   I     VL    D +   + +  + E Y  L 
Sbjct: 225 I-----------------YLESEDYKHTIKYLTGVLE--QDKDFISDVLPTIAECYHHLG 265

Query: 242 LMDE 245
             DE
Sbjct: 266 QEDE 269


>gi|91216109|ref|ZP_01253077.1| tetratricopeptide repeat domain protein [Psychroflexus torquis ATCC
           700755]
 gi|91185626|gb|EAS72001.1| tetratricopeptide repeat domain protein [Psychroflexus torquis ATCC
           700755]
          Length = 605

 Score = 40.5 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 44/132 (33%), Gaps = 7/132 (5%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           R   ++  KA L L +    +A         D     +  + L   A +  +    ++A 
Sbjct: 476 RTDLKLVAKADLLLFQNQPIQALTILEGVLEDHQSPSIVDEVLFRIAKLHLANQDVEKAL 535

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
              +  + ++ +    D   +L+G  Y   ++              Y   ++  + +S Y
Sbjct: 536 PYLQRIVDKHSDEILADNANFLLGTLYMDELKTPD-------QAKPYFETLIFNHPDSLY 588

Query: 175 VKGARFYVTVGR 186
              AR    + R
Sbjct: 589 FVDARKRFRMLR 600


>gi|74318217|ref|YP_315957.1| TPR repeat-containing protein [Thiobacillus denitrificans ATCC
           25259]
 gi|74057712|gb|AAZ98152.1| conserved hypothetical protein containing TPR repeat [Thiobacillus
           denitrificans ATCC 25259]
          Length = 555

 Score = 40.5 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 49/188 (26%), Gaps = 32/188 (17%)

Query: 12  FEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV------Y-EKA 64
           +       +  AL++  + A       +  SS     D          V      Y  + 
Sbjct: 375 YRLSNGMFWSLALSVALAFAWVSSDRLQTFSSTYALWDDAAKKLPDERVLGSARVYANRG 434

Query: 65  VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
            L ++  +F  A + F +  R  P    A K     AF     G + +A +     I   
Sbjct: 435 GLRMERGDFGGAVDDFTRALRADPGYREALKGR---AFAHMKRGDHSRALADATALIRLD 491

Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR--IVERYT---------NSP 173
           P  ++                  V  DQ   +L            R+          +S 
Sbjct: 492 PSRRD-----------SYIARGHVYKDQGDWRLAKADFEYGCAGMRFPAACMAVLTRDSE 540

Query: 174 YVKGARFY 181
               A   
Sbjct: 541 KSDPAAQR 548


>gi|322701171|gb|EFY92922.1| mitochondrial outer membrane 72Kda protein [Metarhizium acridum
           CQMa 102]
          Length = 622

 Score = 40.5 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 47/141 (33%), Gaps = 20/141 (14%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDF 87
           ++   +G   ++  +       D       Y +A     + + ++A + + +     +DF
Sbjct: 377 SISLELGEPVKADAEFAKALEQDKDDPDVYYHRAQASFIKGDLAEAQKDYQKSIDLDKDF 436

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
            F+       +     QY  G    + +     I  +P+  +V Y YY           +
Sbjct: 437 IFSH------IQLGVTQYKMGSIASSMATFRRCIKNFPKVPDV-YNYY----------GE 479

Query: 148 VPYDQRATKLMLQYMSRIVER 168
           +  DQ      ++     +E 
Sbjct: 480 LLLDQSNFSEAVEKFDTAMEM 500


>gi|310816575|ref|YP_003964539.1| tetratricopeptide TPR_2 repeat protein [Ketogulonicigenium vulgare
           Y25]
 gi|308755310|gb|ADO43239.1| tetratricopeptide TPR_2 repeat protein [Ketogulonicigenium vulgare
           Y25]
          Length = 278

 Score = 40.5 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 33/77 (42%), Gaps = 3/77 (3%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           ++E + +A   L + +F  A + F    + +P   ++ +++L     Q   G+  +A   
Sbjct: 155 EQEDFARASEALAQGDFRSAADGFATYLQTYPGGALSAEAMLRRGEAQEGLGQISEA--- 211

Query: 117 GEEYITQYPESKNVDYV 133
              ++  +  + +  Y 
Sbjct: 212 ARSFLESFAGAPDGAYA 228


>gi|84501654|ref|ZP_00999826.1| hypothetical protein OB2597_15670 [Oceanicola batsensis HTCC2597]
 gi|84390275|gb|EAQ02834.1| hypothetical protein OB2597_15670 [Oceanicola batsensis HTCC2597]
          Length = 279

 Score = 40.5 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 15/126 (11%), Positives = 37/126 (29%), Gaps = 22/126 (17%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK-------YQQA 113
           ++ A   L + + + A   F+     +P + +  ++ L       + G+       Y  A
Sbjct: 160 FDAAQAALDDGDAAGAATRFDSFLTTYPGSPLQAQAELGKGRALEAQGEITKASRAYLAA 219

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
            S         P+                  +                ++ +  R+ ++P
Sbjct: 220 FSAA-------PDGPVAAEA--------LLKLGQGLGQLGQGPEACTTLAEVANRFPDAP 264

Query: 174 YVKGAR 179
            V  A+
Sbjct: 265 QVAQAQ 270


>gi|224024925|ref|ZP_03643291.1| hypothetical protein BACCOPRO_01656 [Bacteroides coprophilus DSM
           18228]
 gi|224018161|gb|EEF76159.1| hypothetical protein BACCOPRO_01656 [Bacteroides coprophilus DSM
           18228]
          Length = 251

 Score = 40.5 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 7/74 (9%), Positives = 20/74 (27%), Gaps = 13/74 (17%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL-----LMSAFVQYSAGKYQQAASL 116
             A    +E  +++A + +           +A +              +      +A   
Sbjct: 26  ADADKAYQENKYAEAIKMYENI--------LATQGESAVVYYNLGNSYFKEKNMAKAVLN 77

Query: 117 GEEYITQYPESKNV 130
            E  +   P   ++
Sbjct: 78  YERALLLNPGDADI 91


>gi|164655526|ref|XP_001728892.1| hypothetical protein MGL_3886 [Malassezia globosa CBS 7966]
 gi|159102780|gb|EDP41678.1| hypothetical protein MGL_3886 [Malassezia globosa CBS 7966]
          Length = 331

 Score = 40.5 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 8/90 (8%), Positives = 30/90 (33%), Gaps = 7/90 (7%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKS 96
           +  ++ D    S  D      +      ++  +++  A + + +     P++    + ++
Sbjct: 82  DSGANVDTKHVSEEDSSKAESLKNDGNKYMSAKDYGAALDSYTKAIELNPYSPVFYSNRA 141

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
                      G++ +A +   +     P 
Sbjct: 142 A-----AYSQIGQHDEAIADARKAAEINPT 166


>gi|149631899|ref|XP_001506573.1| PREDICTED: similar to KIAA0155 isoform 2 [Ornithorhynchus anatinus]
          Length = 1165

 Score = 40.5 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 41/273 (15%), Positives = 99/273 (36%), Gaps = 33/273 (12%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
           A L RA    E   +     ++T  +++A  +    E   +  +Y + + +     + Y 
Sbjct: 476 ASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYL 535

Query: 63  K-AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           +   +   + NF +A ++F +    ++D P    +    L  A       ++       E
Sbjct: 536 RLGAMARDKGNFYEASDWFKEALQINQDHP-DAWSLIGNLHLA-----KQEWGPGQKKFE 589

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ----RATKLMLQYMSRIVERYTNSPY 174
             + Q P ++N  Y    +G  + Q +     D+    R     L    +++     + Y
Sbjct: 590 RILKQ-PSTQNDTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLY 648

Query: 175 VKGA-------RFYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVL 217
                      + Y    R+  A  +E         + +   Y+++ +Y++A+  ++  L
Sbjct: 649 AANGIGAVLAHKGYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCL 708

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
             +   ++ E  +  L  A      + E ++ +
Sbjct: 709 RKFYKHQNTEVVLY-LARALFKCGKLQECKQTL 740


>gi|74755898|sp|Q5R3I4|TTC38_HUMAN RecName: Full=Tetratricopeptide repeat protein 38; Short=TPR repeat
           protein 38
 gi|56208100|emb|CAI18791.1| novel protein [Homo sapiens]
          Length = 469

 Score = 40.5 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 45/150 (30%), Gaps = 29/150 (19%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQ----------REVYEKAVLFLKEQNFSKAYE 78
                 L+G       D  LD       +           +++  AV      NF KA E
Sbjct: 70  MATGLVLIGTGSSVKLDKELDLAVKTMVEISRTQPLTRREQLHVSAVETFANGNFPKACE 129

Query: 79  YFNQCSRDFPFAGVARKSLLMSA-----FVQYSAGKYQQAASLGEEYITQYPE-SKNVDY 132
            + Q  +D P          M A        +  G  +Q           YP  + ++  
Sbjct: 130 LWEQILQDHPTD--------MLALKFSHDAYFYLGYQEQMRDSVAR---IYPFWTPDIPL 178

Query: 133 VYYLVGMSYAQMIRDVPYDQ--RATKLMLQ 160
             Y+ G+    ++    YDQ  +  K  L 
Sbjct: 179 SSYVKGIYSFGLMETNFYDQAEKLAKEALS 208


>gi|116812608|ref|NP_060401.2| tetratricopeptide repeat protein 38 [Homo sapiens]
 gi|32949297|gb|AAH18918.2| Tetratricopeptide repeat domain 38 [Homo sapiens]
 gi|119593820|gb|EAW73414.1| hypothetical protein FLJ20699, isoform CRA_c [Homo sapiens]
 gi|312151730|gb|ADQ32377.1| hypothetical protein FLJ20699 [synthetic construct]
          Length = 469

 Score = 40.5 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 45/150 (30%), Gaps = 29/150 (19%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQ----------REVYEKAVLFLKEQNFSKAYE 78
                 L+G       D  LD       +           +++  AV      NF KA E
Sbjct: 70  MATGLVLIGTGSSVKLDKELDLAVKTMVEISRTQPLTRREQLHVSAVETFANGNFPKACE 129

Query: 79  YFNQCSRDFPFAGVARKSLLMSA-----FVQYSAGKYQQAASLGEEYITQYPE-SKNVDY 132
            + Q  +D P          M A        +  G  +Q           YP  + ++  
Sbjct: 130 LWEQILQDHPTD--------MLALKFSHDAYFYLGYQEQMRDSVAR---IYPFWTPDIPL 178

Query: 133 VYYLVGMSYAQMIRDVPYDQ--RATKLMLQ 160
             Y+ G+    ++    YDQ  +  K  L 
Sbjct: 179 SSYVKGIYSFGLMETNFYDQAEKLAKEALS 208


>gi|24583150|ref|NP_524895.2| FK506-binding protein FKBP59 [Drosophila melanogaster]
 gi|74869710|sp|Q9VL78|FKB59_DROME RecName: Full=FK506-binding protein 59; AltName:
           Full=Peptidyl-prolyl cis-trans isomerase; Short=PPIase;
           AltName: Full=Rotamase; AltName: Full=dFKBP59
 gi|7297564|gb|AAF52818.1| FK506-binding protein FKBP59 [Drosophila melanogaster]
 gi|16198261|gb|AAL13958.1| LD47530p [Drosophila melanogaster]
 gi|220946436|gb|ACL85761.1| FKBP59-PA [synthetic construct]
          Length = 439

 Score = 40.5 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 24/164 (14%), Positives = 53/164 (32%), Gaps = 25/164 (15%)

Query: 35  LVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
           LV   +        D   +   + +VY EK   + K++N++ A + + +C    P     
Sbjct: 231 LVDCGKGLEEWKLSDE--ERLAEAKVYKEKGTNYFKKENWALAIKMYTKCKNILPTTVHT 288

Query: 94  ----RKSLL----MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
               +K  +      A     +  + +A     E +      KN     Y  G     + 
Sbjct: 289 NEEVKKIKVATHSNIALCHQKSNDHFEAKQECNEVLAL---DKNNVKALYRRGQCNLTI- 344

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
                     +  L+   ++++    +     A   V + + +L
Sbjct: 345 -------NELEDALEDFQKVIQLEPGNK---AAANQVIICKQKL 378


>gi|83859797|ref|ZP_00953317.1| TPR repeat protein [Oceanicaulis alexandrii HTCC2633]
 gi|83852156|gb|EAP90010.1| TPR repeat protein [Oceanicaulis alexandrii HTCC2633]
          Length = 317

 Score = 40.5 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 37/138 (26%), Gaps = 22/138 (15%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
               V     ++E A   L + +F  A E     +  +P      ++        +  G 
Sbjct: 185 PPEPVMDADTLFETANARLLDGDFGGARELLRDFTETYPDDQKVGQAWYWLGETHFINGD 244

Query: 110 YQQAASLG------EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           +Q AA         +       +          +G S A +          T    Q ++
Sbjct: 245 FQDAADSYIASLQEDR------QGPRAPDALVRLGASLAAL--------GETSRACQVLA 290

Query: 164 RIVERYTNSPYVKGARFY 181
                +  +     AR  
Sbjct: 291 TFPSEFPRA--GDDARRK 306



 Score = 35.9 bits (82), Expect = 7.0,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 33/101 (32%), Gaps = 14/101 (13%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
             + +    E Y +   V  A ++       L       G +      Y+A+       L
Sbjct: 211 ARELLRDFTETYPDDQKVGQAWYW-------LGETHFINGDFQDAADSYIAS-------L 256

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
                   A +A+ RL  +  AL     A +V++     +P
Sbjct: 257 QEDRQGPRAPDALVRLGASLAALGETSRACQVLATFPSEFP 297


>gi|310822888|ref|YP_003955246.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309395960|gb|ADO73419.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1]
          Length = 1216

 Score = 40.5 bits (94), Expect = 0.24,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 61/162 (37%), Gaps = 34/162 (20%)

Query: 93  ARKSLLMSAFVQYSAGKYQQ-AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
           + K+ L++      + +Y + A     + + +YP  +  D V + +G    +  +D    
Sbjct: 167 SEKAELIA-----RSKEYGKHAVEQYTKIVQEYPSFERSDEVLFFLGNFLMEDGQD---- 217

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL-----KRGEY 206
               +  L    R+VE++  S ++                  +  G YY      KR E 
Sbjct: 218 ----RKALVAYKRLVEKFPKSKFLPDVY--------------LAFGEYYFNNSKGKRPEL 259

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
             A+  ++     +++++    A+ +    Y  +    +A++
Sbjct: 260 EKALEAYRRAAE-FTESQAYAFAIYKQGWCYFNMGEYAQAKD 300



 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 27/82 (32%), Gaps = 8/82 (9%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
             D        + +Y  +V F K +   +A E        +P +         S +    
Sbjct: 734 VKDFPETTIADQALYNASVDFFKAKMLDRAIEVRQSLISQYPRSRFVP----DSIYANAE 789

Query: 107 A----GKYQQAASLGEEYITQY 124
           A    G + QAA   E Y+  Y
Sbjct: 790 ALEAIGDFAQAADTYELYVKGY 811


>gi|116622726|ref|YP_824882.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116225888|gb|ABJ84597.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 547

 Score = 40.5 bits (94), Expect = 0.24,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 66/200 (33%), Gaps = 34/200 (17%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           +  A+   K   F +A E +++C +  P +  +         V+   G    A S  E  
Sbjct: 270 FNLALAHQKSGRFEQAAEAYSECVKLRPQSCESHT---NLGIVREQTGDTAGARSSYERA 326

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           I   P+            ++    +  +       +   +Y  ++++R       + ARF
Sbjct: 327 IKAGPD-----------ALAPLWNLALLLEHAGQFEESERYYKQVLDRAPK---EEEARF 372

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
            +   R              L+R +Y  A   F+  L          EA A L  AY  +
Sbjct: 373 RMGFLR--------------LQREDYRGAAEAFEGCLKYRP---AWPEAHANLALAYSGM 415

Query: 241 ALMDEAREVVSLIQERYPQG 260
              D A  +   + +  P+ 
Sbjct: 416 GERDHAERLYEKMLDADPKS 435


>gi|302037598|ref|YP_003797920.1| hypothetical protein NIDE2282 [Candidatus Nitrospira defluvii]
 gi|300605662|emb|CBK41995.1| protein of unknown function, TPR-like [Candidatus Nitrospira
           defluvii]
          Length = 693

 Score = 40.5 bits (94), Expect = 0.24,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 63/207 (30%), Gaps = 37/207 (17%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE--- 119
           +A    +      A   +   S  +P       +L    +       Y   A   +    
Sbjct: 202 QAHSLYRMGRIKDADALYESLSSRWP------AALRADPYALLR---YADTAGEAQRGPV 252

Query: 120 -------YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
                  +   YP      +V   +  SY +  R         +    + + ++ +Y ++
Sbjct: 253 MREQLLHFYNLYPSRPENPFVLMHLADSYKEAGR--------WEDASMFYAALMSQYPDA 304

Query: 173 PYVKGARFYVTVGRNQL--AAKEV--------EIGRYYLKRGEYVAAIPRFQLVLANYSD 222
             V  AR      +  L    +EV         +    LK GE ++    F+     Y D
Sbjct: 305 QVVPTARLRYADVQEHLTPEGEEVNLRHTIAAHLANVPLKPGEMLSPRQLFESSAKQYED 364

Query: 223 AEHAEEAMARLVEAYVALALMDEAREV 249
           +    EA+  L +A       ++A + 
Sbjct: 365 SPVGSEALFHLGQALERAGKQEDALKA 391


>gi|56750530|ref|YP_171231.1| hypothetical protein syc0521_c [Synechococcus elongatus PCC 6301]
 gi|56685489|dbj|BAD78711.1| hypothetical protein [Synechococcus elongatus PCC 6301]
          Length = 135

 Score = 40.5 bits (94), Expect = 0.24,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 31/81 (38%), Gaps = 10/81 (12%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++A + +     ++A +  +      P FA    R+++L      Y  G+Y ++    + 
Sbjct: 45  QRAEVLMTAGEMAEAEQLLSDLINQLPDFAEAWNRRAVL-----HYLQGRYSESLEDCDR 99

Query: 120 YITQYPESKNVDYVYYLVGMS 140
            I   P         +  G+S
Sbjct: 100 VIDLNPIHFG---ALHGKGLS 117


>gi|291569240|dbj|BAI91512.1| TPR domain protein [Arthrospira platensis NIES-39]
          Length = 1337

 Score = 40.5 bits (94), Expect = 0.24,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 48/141 (34%), Gaps = 21/141 (14%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y + +       + KA   ++Q  +   F     ++        Y  G+Y++A S  ++ 
Sbjct: 385 YNRGLALGNLGEYEKAISSYDQAIK---FKPDYHEAWFNRGLALYDLGEYEKAISSYDQA 441

Query: 121 ITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           I   P     DY   +++ G++ + +           +  +    + ++   +   +  A
Sbjct: 442 IKFKP-----DYHEAWFVRGVALSYL--------GEHEKAISSYDQAIKIKPD---LHEA 485

Query: 179 RFYVTVGRNQLAAKEVEIGRY 199
                   + L   E  I  Y
Sbjct: 486 WSNRGSALSHLGEYEKAISSY 506


>gi|227356456|ref|ZP_03840844.1| cellulose synthase protein [Proteus mirabilis ATCC 29906]
 gi|227163566|gb|EEI48487.1| cellulose synthase protein [Proteus mirabilis ATCC 29906]
          Length = 1090

 Score = 40.5 bits (94), Expect = 0.24,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 78/213 (36%), Gaps = 32/213 (15%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +  KA   L  Q +S A  YF Q  +    +    ++ +    ++ +  + +QA    ++
Sbjct: 279 LLAKADEALLNQEYSVAKRYFTQVRQL---SPYKSEAYIGLGDIELAQHQLEQAERYYQQ 335

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +   P          L  ++           Q++ +   Q+M+ +  +     Y   A+
Sbjct: 336 ALQYQPNDAAT-----LHSLTKLYR-------QQSHQKAAQFMANLTSQ----QYKNLAQ 379

Query: 180 FY---VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
            Y   ++  +  LAA +        ++  Y++AI + + +   Y D       + RL + 
Sbjct: 380 DYGYIISGIQQDLAADD-------EQQQHYLSAIEKRKAIAKAYPDEVWN---IYRLADD 429

Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYVETL 269
            +       A +  + + +R P     RY   L
Sbjct: 430 LLITQQPQLAEDYFNQLNQRRPNDPSRRYAYAL 462


>gi|216264231|ref|ZP_03436223.1| conserved hypothetical protein [Borrelia burgdorferi 156a]
 gi|223888834|ref|ZP_03623425.1| conserved hypothetical protein [Borrelia burgdorferi 64b]
 gi|225549074|ref|ZP_03770049.1| conserved hypothetical protein [Borrelia burgdorferi 94a]
 gi|215980704|gb|EEC21511.1| conserved hypothetical protein [Borrelia burgdorferi 156a]
 gi|223885650|gb|EEF56749.1| conserved hypothetical protein [Borrelia burgdorferi 64b]
 gi|225370300|gb|EEG99738.1| conserved hypothetical protein [Borrelia burgdorferi 94a]
          Length = 228

 Score = 40.5 bits (94), Expect = 0.24,   Method: Composition-based stats.
 Identities = 19/176 (10%), Positives = 57/176 (32%), Gaps = 36/176 (20%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           +TI        +      ++  + L+   +     ++Y+K++L    + ++KA E   + 
Sbjct: 4   ITIMILFYGLIINVCPTTTTSILKLNKKANKHTIEKLYQKSMLLKDSKKYNKAIESLTKI 63

Query: 84  SRDFPFAGVARKSLLMSAFVQ-------YSAGKYQQAASLGEEYITQ------YPESKNV 130
                            A          Y    +++A    ++Y+             ++
Sbjct: 64  INM----------DQNQADAHLLLSELEYLNKNWKKAIIKSQDYLKIIDFKDKN-NFLDI 112

Query: 131 DYVYYLVG---------MSYAQMIRDVPYDQRATKLMLQY-MSRIVERYTNSPYVK 176
            + Y+L+G         + + Q  +++        + +     + +  +TN+    
Sbjct: 113 SWAYFLIGEVKNSMDYIIKFFQSGKELFR--ENIFIAIDALFKKSIYHFTNNENAA 166


>gi|163786667|ref|ZP_02181115.1| hypothetical protein FBALC1_15817 [Flavobacteriales bacterium
           ALC-1]
 gi|159878527|gb|EDP72583.1| hypothetical protein FBALC1_15817 [Flavobacteriales bacterium
           ALC-1]
          Length = 594

 Score = 40.5 bits (94), Expect = 0.24,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 7/126 (5%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y KA LF  +    +A    ++   +     +  ++L   A +     +Y +A +   E 
Sbjct: 471 YAKADLFAFQNKTDEAISLLDKILTEHKGESITDQTLFKQAKLFEKKKQYNKAEANYLEI 530

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           I  Y E    D  +Y +   Y   +          +   Q   +I+  + +S Y   AR 
Sbjct: 531 IKDYREDILADDAHYYLAELYNTFLAKP-------EDAKQLYEKIIFEFEDSIYFIEARK 583

Query: 181 YVTVGR 186
              + R
Sbjct: 584 KFRMLR 589


>gi|149176885|ref|ZP_01855495.1| hypothetical protein PM8797T_14082 [Planctomyces maris DSM 8797]
 gi|148844322|gb|EDL58675.1| hypothetical protein PM8797T_14082 [Planctomyces maris DSM 8797]
          Length = 348

 Score = 40.5 bits (94), Expect = 0.24,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 70/210 (33%), Gaps = 30/210 (14%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
               L ++++  A   F    R  P+      +  M A V  + G  + A +  E     
Sbjct: 159 GESQLAKKDYVAANSAFGTVERS-PWKDYQMDAKNMKARVLLAQGNTKGALAAFETVAKM 217

Query: 124 Y---PE---SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
               P    +K+       +G +        P D       ++ +  I++  ++S     
Sbjct: 218 DGKTPGELANKHAA----QLGSAICLEKDGKPQD------AIKVLDEIIKNVSSSQ---- 263

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE-EAMARLVEA 236
                    + LA   ++ G  Y   GE   A+  +  V   +        EA+  L   
Sbjct: 264 --------SSLLAEAYLKKGDCYQALGESKEALIAYLHVDVLFPSEPAVHAEALYHLSTL 315

Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYV 266
           +  +   +   E  +++Q++YP   W +  
Sbjct: 316 WGKVQKPERGNEARAVLQQQYPDSEWTQKA 345


>gi|86159124|ref|YP_465909.1| hypothetical protein Adeh_2702 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85775635|gb|ABC82472.1| hypothetical protein Adeh_2702 [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 285

 Score = 40.5 bits (94), Expect = 0.24,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 41/121 (33%), Gaps = 9/121 (7%)

Query: 65  VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
               ++    +A       +  +P    A  +LL SA    +AG+ + A +L      +Y
Sbjct: 156 RAARRKGGLDRA-HALEDFTARYPRHPAADNALLESAEAYAAAGRNEAACALVRRTADEY 214

Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
           P    +      +    A++ R               + R+V+ Y  +P  + A   +  
Sbjct: 215 PAGDAMSAALERLAACAARLGR--------ADEERSLLQRLVDDYPGTPAAQRAGGRLGH 266

Query: 185 G 185
            
Sbjct: 267 L 267



 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 34/120 (28%), Gaps = 26/120 (21%)

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
             E++  +YP     D        +YA   R+        +     + R  + Y     +
Sbjct: 169 ALEDFTARYPRHPAADNALLESAEAYAAAGRN--------EAACALVRRTADEYPAGDAM 220

Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR--FQLVLANYSDAEHAEEAMARL 233
             A   +     +L                  A   R   Q ++ +Y     A+ A  RL
Sbjct: 221 SAALERLAACAARLGR----------------ADEERSLLQRLVDDYPGTPAAQRAGGRL 264


>gi|330507774|ref|YP_004384202.1| TPR-repeat-containing protein [Methanosaeta concilii GP-6]
 gi|328928582|gb|AEB68384.1| TPR-repeat protein [Methanosaeta concilii GP-6]
          Length = 432

 Score = 40.5 bits (94), Expect = 0.24,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 41/110 (37%), Gaps = 6/110 (5%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
            V  ++G   ++ +        D ++    Y K     +   + +A +  +Q     P  
Sbjct: 207 TVLGILGKYDEAIKPFDQAISIDPQFAEAWYNKGTALGRLGKYDEAIKACDQAISIDP-- 264

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
            +A    +      Y  GKY +A    ++ I+  P+   +   +Y  G++
Sbjct: 265 QLAETWTIKGI-ALYDLGKYDEAIQAYDQAISINPQ---IAEAWYNKGVA 310



 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/117 (11%), Positives = 36/117 (30%), Gaps = 20/117 (17%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
            K         + +A + ++Q       + +   + K   + A      GKY +A +  +
Sbjct: 68  NKGEALRALGRYDEAIQAYDQAISIDPQYAY-AWSNKGEALRA-----LGKYDEAINACD 121

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
           + I+  P+     + + + G +          D       +    + +       Y 
Sbjct: 122 QAISINPQD---AFAWTIKGNALY--------DLGKYDEAINAYDQAISIDPQYAYA 167


>gi|322706857|gb|EFY98436.1| mitochondrial outer membrane 72K protein [Metarhizium anisopliae
           ARSEF 23]
          Length = 622

 Score = 40.5 bits (94), Expect = 0.24,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 47/141 (33%), Gaps = 20/141 (14%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDF 87
           ++   +G   ++  +       D       Y +A     + + ++A + + +     +DF
Sbjct: 377 SISLELGEPDKADAEFAKALEQDKDDPDVYYHRAQASFIKGDLAEAQKDYQKSIDLDKDF 436

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
            F+       +     QY  G    + +     I  +P+  +V Y YY           +
Sbjct: 437 IFSH------IQLGVTQYKMGSIASSMATFRRCIKNFPKVPDV-YNYY----------GE 479

Query: 148 VPYDQRATKLMLQYMSRIVER 168
           +  DQ      ++     +E 
Sbjct: 480 LLLDQSNFSEAVEKFDTAMEM 500


>gi|260772529|ref|ZP_05881445.1| TPR repeat-containing protein [Vibrio metschnikovii CIP 69.14]
 gi|260611668|gb|EEX36871.1| TPR repeat-containing protein [Vibrio metschnikovii CIP 69.14]
          Length = 259

 Score = 40.5 bits (94), Expect = 0.24,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 53/147 (36%), Gaps = 12/147 (8%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
               + ++ L + +    ++  Y+ AV   LK+++++ A   F +   D+P +  A  + 
Sbjct: 123 AANQNDELPLGTFSSDVNEQAAYQNAVDLILKKRDYAGAIAAFEKFQADYPDSSFAANAH 182

Query: 98  LMSAFVQY-SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
                + +      Q A S     +  Y +S         +G        D+        
Sbjct: 183 YWLGQLHFAKRQDQQSAKSFAA--VLSYSDSNKRADALVKLG--------DIAARNNNAA 232

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVT 183
              +Y  +++  Y NS   K A+  + 
Sbjct: 233 QAKKYYQQVINEYPNSASAKAAQDKLK 259



 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 23/124 (18%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               Y  A +  E++   YP+S      +Y +G  +    +    DQ++ K     +S  
Sbjct: 154 KKRDYAGAIAAFEKFQADYPDSSFAANAHYWLGQLHFAKRQ----DQQSAKSFAAVLS-- 207

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
              Y++S     A   +     +             +  +Y      +Q V+  Y ++  
Sbjct: 208 ---YSDSNKRADALVKLGDIAARNNNA--------AQAKKY------YQQVINEYPNSAS 250

Query: 226 AEEA 229
           A+ A
Sbjct: 251 AKAA 254


>gi|242278388|ref|YP_002990517.1| peptidase M48 Ste24p [Desulfovibrio salexigens DSM 2638]
 gi|242121282|gb|ACS78978.1| peptidase M48 Ste24p [Desulfovibrio salexigens DSM 2638]
          Length = 440

 Score = 40.5 bits (94), Expect = 0.24,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 62/151 (41%), Gaps = 17/151 (11%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S+  ++   E  +K    ++++++++A E+F++  R  P    A   LL+ +  Q + GK
Sbjct: 281 SIRKIKPAIEEMQKGEGAMRKKSYNEAEEHFSKALRIAP-NDYA--GLLLMSKCQLAQGK 337

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            ++     ++   +YP+        +L GM        +  + R  K  L       +R 
Sbjct: 338 AKEGLHYAQQAKNRYPQE---AQALHLTGM--------LSLENRQFKQALSNFDAYEKRL 386

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
             +P      FY  V    L  +E+    YY
Sbjct: 387 PGNP---MTTFYKGVSYEALGNREMAANEYY 414


>gi|203284442|ref|YP_002222182.1| TPR domain protein [Borrelia duttonii Ly]
 gi|201083885|gb|ACH93476.1| TPR domain protein [Borrelia duttonii Ly]
          Length = 223

 Score = 40.5 bits (94), Expect = 0.24,   Method: Composition-based stats.
 Identities = 10/67 (14%), Positives = 26/67 (38%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              +  +  +  A ++F +            K  +++A   Y   +Y +A    E  +  
Sbjct: 109 GEAYFFQGQYKNALKHFQKYIGLDANGARIAKVYILTADSFYKLERYNEADFAYENALRF 168

Query: 124 YPESKNV 130
           +P ++N+
Sbjct: 169 FPNNQNI 175


>gi|282897165|ref|ZP_06305167.1| TPR repeat protein [Raphidiopsis brookii D9]
 gi|281197817|gb|EFA72711.1| TPR repeat protein [Raphidiopsis brookii D9]
          Length = 231

 Score = 40.5 bits (94), Expect = 0.24,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 45/126 (35%), Gaps = 9/126 (7%)

Query: 17  YQLYKFALTIFFSIAVCFLVGWERQSSRDVY-LDSVTDVRYQREVYEKAVLFLKEQNFSK 75
           Y+   F L       +  +       S+    L +    R  R++ E+    +   ++S 
Sbjct: 3   YKQRSFFLATLILGGILSISPLMTTQSQAAESLLAQAGNRKLRDLLEQGRRLVDLGDYSG 62

Query: 76  AYEYFNQCSRDFPFAGVARKSLLM--SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
           A   +   ++  P     + + +     ++    G + Q+ S   + I+  P + +  Y 
Sbjct: 63  AIAVYQDAAKLAP-----KNAKIYSGIGYLYAQQGNFSQSLSAYRQAISINPNNSDFYYA 117

Query: 134 Y-YLVG 138
             Y+ G
Sbjct: 118 VGYIKG 123


>gi|241953747|ref|XP_002419595.1| general transcriptional co-repressor, putative [Candida
           dubliniensis CD36]
 gi|223642935|emb|CAX43190.1| general transcriptional co-repressor, putative [Candida
           dubliniensis CD36]
          Length = 1076

 Score = 40.5 bits (94), Expect = 0.24,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 39/137 (28%), Gaps = 25/137 (18%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGK 109
           D       Y    + +   +F+ AYE F Q        P              + Y   +
Sbjct: 370 DQSDAHSWYYLGRVEMIRGDFTAAYEAFQQAVNRDARNP-TFWC-----SIGVLYYQISQ 423

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSY---AQMIRDVPYDQRATKLMLQYMSRIV 166
           Y+ A       I   P    +  V+Y +G  Y      I D           L    +  
Sbjct: 424 YRDALDAYTRAIRLNP---YISEVWYDLGTLYETCNNQISD----------ALDAYRQAE 470

Query: 167 ERYTNSPYVKGARFYVT 183
               N+P++K     + 
Sbjct: 471 RLDPNNPHIKARLEQLI 487


>gi|120554731|ref|YP_959082.1| TPR repeat-containing protein [Marinobacter aquaeolei VT8]
 gi|120324580|gb|ABM18895.1| Tetratricopeptide TPR_2 repeat protein [Marinobacter aquaeolei VT8]
          Length = 952

 Score = 40.5 bits (94), Expect = 0.24,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 53/166 (31%), Gaps = 23/166 (13%)

Query: 108 GKYQQAASLGEEYITQYPESKNVD-YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
            +Y  A  + E YI  +P S     Y        + ++I  +      T+ + +  +  V
Sbjct: 307 EQYGDAIDVFEAYIEDHPASPWAPRY--------HIRIIDTLEL-AGFTRTVPERKADFV 357

Query: 167 ERYT-NSPYVKGA--------RFYVTVGRNQLAAKEVEIG----RYYLKRGEYVAAIPRF 213
             Y   S Y + A           +     +LA ++  +             Y  A   +
Sbjct: 358 SLYGIYSDYWQSAGPDAMGFIEQQLEQLLPELADRQYLLAGESSDQQQADDHYRKAASYY 417

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
               A + D     E +  L E Y+ L    EA      +   YPQ
Sbjct: 418 AEFAATFPDHPRTPERLFLLGETYLELEDWAEAIAAFERVAYDYPQ 463



 Score = 40.5 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 8/74 (10%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +   A    +  +++YPE +  D +YY +  ++            AT   L  +  +V 
Sbjct: 110 DELAGAIEAYQRLLSEYPEREGNDKIYYQLARAWELR--------GATPQQLDTLDTLVR 161

Query: 168 RYTNSPYVKGARFY 181
           RY +S Y   A+F 
Sbjct: 162 RYPDSDYWIEAQFR 175



 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 58/190 (30%), Gaps = 26/190 (13%)

Query: 73  FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE---SKN 129
           + KA  Y+ + +  FP      + L +          + +A +  E     YP+   S  
Sbjct: 410 YRKAASYYAEFAATFPDHPRTPERLFLLGETYLELEDWAEAIAAFERVAYDYPQDTVSGR 469

Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER-----YTNSPYVKGARFYVTV 184
                Y   +++ +          + +   Q + ++        +   P    A +Y+ +
Sbjct: 470 AAEAGYASVLAFREYSITWNSLPISEQAAYQELQQLNRLRFANAFPEDPRAP-AVYYIAL 528

Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE---EAMARLVEAYVALA 241
                   E +       R  +   +     ++  +     AE   EA+     +   LA
Sbjct: 529 ------QHEFD-------RNNWEETVNMAARLV-TWQPTPSAELTTEALLLSGHSLSELA 574

Query: 242 LMDEAREVVS 251
              EA +   
Sbjct: 575 RYSEAEQAYR 584


>gi|297823015|ref|XP_002879390.1| calcium-binding EF hand family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297325229|gb|EFH55649.1| calcium-binding EF hand family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 800

 Score = 40.5 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 51/158 (32%), Gaps = 17/158 (10%)

Query: 14  AWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF 73
            WAY L +  + +  S+    +V    +  R+  +   T  R  + +            +
Sbjct: 301 QWAYLLPQIYVNLGISLEGEGMVLSACEYYREAAILCPTHYRALKLL---GSALFGVGEY 357

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
             A +        +     A  +    A   ++ G+ ++A  + +  I   P   +    
Sbjct: 358 RAAVKALE--EAIYLKPDYA-DAHCDLASSLHAMGEDERAIEVFQRAIDLKPGHVD---A 411

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            Y +G  Y         D    +   +  +R++  + N
Sbjct: 412 LYNLGGLYM--------DLGRFQRASEMYTRVLAVWPN 441


>gi|198420281|ref|XP_002129495.1| PREDICTED: similar to intraflagellar transport 88 homolog
           (Chlamydomonas) isoform 2 [Ciona intestinalis]
          Length = 821

 Score = 40.5 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 72/269 (26%), Gaps = 58/269 (21%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGV 92
           FL G    + R        D      +  KA    +E +   A   +      D   +  
Sbjct: 471 FLQGNAENAKRYADAAVKADRFNATSLTNKANCLYREGDAEGAVTLYKEALEND---SSC 527

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY-- 150
              +L     V  S G+   +    + ++  +   +N   V + +  S  +M+ D     
Sbjct: 528 HE-ALYNLGLVNKSLGRLDDSL---DSFMKLHNIVRNSAQVMFQIA-SLYEMMEDGTQAM 582

Query: 151 ---------------------------DQRATKLMLQYMSRIVERYT------------- 170
                                      D         Y       +              
Sbjct: 583 EWLMQCVGIVPTDASVMSRMADICENEDNGDRTQAFAYRMDSYRLFPADIDTVEWLGGYY 642

Query: 171 -NSPYVKGARF---YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
             S + + A        V +      ++ +   Y + G Y  A  +++ +   + D    
Sbjct: 643 VESQFSEKAIKYFERAAVIQPNEVKWQLMVASCYRRSGNYQGAFEKYKQIHGKFPD---N 699

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQE 255
            E +  L      L L  E +E  + +++
Sbjct: 700 IECLKYLNRLCSDLGLNKELQEFANKLRK 728


>gi|254453281|ref|ZP_05066718.1| tetratricopeptide repeat domain protein [Octadecabacter antarcticus
           238]
 gi|198267687|gb|EDY91957.1| tetratricopeptide repeat domain protein [Octadecabacter antarcticus
           238]
          Length = 562

 Score = 40.5 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 38/97 (39%), Gaps = 9/97 (9%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
           ++ N + A     +   D P+     A +  L    +Q + G Y  AA+  +     +PE
Sbjct: 94  QDGNGATAIALLEKLKSDAPYGSGYFAFRLNLNIGVIQQNIGDYPSAAASLKAAHEFFPE 153

Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
                       +++A+++     DQ A +   + ++
Sbjct: 154 HHKA-----QTALAFAELLDG--KDQAALERTTELLN 183


>gi|113478133|ref|YP_724194.1| sulfotransferase [Trichodesmium erythraeum IMS101]
 gi|110169181|gb|ABG53721.1| sulfotransferase [Trichodesmium erythraeum IMS101]
          Length = 682

 Score = 40.5 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 69/205 (33%), Gaps = 34/205 (16%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            YE    FL++Q + KA   + Q  +  P                    K+ +A +  ++
Sbjct: 3   YYELGEKFLEQQQWEKAVTSYRQAIKLNPTFSWH---YYKLGQALTQLQKWDEAITNYQK 59

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            I     + +  + Y+ +G +  +        Q   +  +      ++   NS       
Sbjct: 60  AIEL---NSDFPWSYHHLGNALLK--------QEKWEEAVNAYHNFIKL--NSD------ 100

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                  N  A  ++    +  K GE+ AAI  +Q  +    + +   + +A ++     
Sbjct: 101 -------NYWAYHKLGEALF--KIGEFDAAIISYQKAIKINPEIKGTHQKLADIL---FH 148

Query: 240 LALMDEAREVVSLIQERYPQGYWAR 264
           +  ++ A        +  P+  W R
Sbjct: 149 IGQLEAAEIAYRKAIKLNPEVVWYR 173


>gi|307247717|ref|ZP_07529755.1| hypothetical protein appser2_7080 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306855747|gb|EFM87912.1| hypothetical protein appser2_7080 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
          Length = 391

 Score = 40.5 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 82/212 (38%), Gaps = 34/212 (16%)

Query: 48  LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           LD+  D   ++++  K   A  F+    + +A  Y+     +      A  SL     V 
Sbjct: 96  LDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDE---PEFAVNSLTQLMTVY 152

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
               ++++A ++ E+ I   P++  +   +Y     YAQ I++   D       L  +S+
Sbjct: 153 QKTKEWKKAVNVAEKLIKIEPDTDKIPLSHYY--CEYAQAIKNEDLDGH-----LSALSK 205

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
            +E                      A   + +G YYL + ++ +A+  ++ +L    D  
Sbjct: 206 ALEYSPQC-----------------ARASILLGDYYLAQNQFQSALKNYERILQQDPD-- 246

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQER 256
              E + ++   Y  +A  D A   + LI+  
Sbjct: 247 FISEVIEKIKACY--MAENDLANYELFLIRAN 276


>gi|198420279|ref|XP_002129474.1| PREDICTED: similar to intraflagellar transport 88 homolog
           (Chlamydomonas) isoform 1 [Ciona intestinalis]
          Length = 833

 Score = 40.5 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 72/269 (26%), Gaps = 58/269 (21%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGV 92
           FL G    + R        D      +  KA    +E +   A   +      D   +  
Sbjct: 471 FLQGNAENAKRYADAAVKADRFNATSLTNKANCLYREGDAEGAVTLYKEALEND---SSC 527

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY-- 150
              +L     V  S G+   +    + ++  +   +N   V + +  S  +M+ D     
Sbjct: 528 HE-ALYNLGLVNKSLGRLDDSL---DSFMKLHNIVRNSAQVMFQIA-SLYEMMEDGTQAM 582

Query: 151 ---------------------------DQRATKLMLQYMSRIVERYT------------- 170
                                      D         Y       +              
Sbjct: 583 EWLMQCVGIVPTDASVMSRMADICENEDNGDRTQAFAYRMDSYRLFPADIDTVEWLGGYY 642

Query: 171 -NSPYVKGARF---YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
             S + + A        V +      ++ +   Y + G Y  A  +++ +   + D    
Sbjct: 643 VESQFSEKAIKYFERAAVIQPNEVKWQLMVASCYRRSGNYQGAFEKYKQIHGKFPD---N 699

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQE 255
            E +  L      L L  E +E  + +++
Sbjct: 700 IECLKYLNRLCSDLGLNKELQEFANKLRK 728


>gi|86608982|ref|YP_477744.1| TPR repeat-containing protein kinase [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|86557524|gb|ABD02481.1| tetratricopeptide repeat/protein kinase domain protein
           [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 1270

 Score = 40.5 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 42/118 (35%), Gaps = 14/118 (11%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           E+A L  +   + +A   +++  R  P       + L         G +  A       +
Sbjct: 832 ERAELCRQLGRWPEAIADYDEVLRQDPQ-DWT--AWLGRGMAHGQVGNWDSAIQDLSRVL 888

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            Q P+ +      +  G +  Q+          T+  LQ ++R+++R       + AR
Sbjct: 889 QQDPDHRE---ALWHRGQALQQL--------GQTEAALQDLNRLLQRDPQHRMARLAR 935



 Score = 39.7 bits (92), Expect = 0.48,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 61/200 (30%), Gaps = 38/200 (19%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++     K  + + A   + Q  +         ++       +Y    Y+ A +   + +
Sbjct: 334 QRGSARYKSGDLAGAIADYTQVIQLA--GD--ARAYFNRGIARYRLEDYEGAVADYTQAL 389

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              P+       YY  G +Y Q+ +         +  ++  SR +E           R Y
Sbjct: 390 GLNPQ---WAVAYYNRGNAYRQLNQQ--------QQAIEDYSRAIELNPE-----DVRAY 433

Query: 182 VT--VGRNQLAAKEVEIGRY-------------YLKRGEYVAAIPRFQLVLANYSDAEHA 226
               V R  L   +     +             Y  RG     +   Q  + +Y+ A   
Sbjct: 434 FNRGVVRGHLGDAQGAAADFSEVIKRDPQDGEAYFNRGVARVQLSDLQGAVEDYTQALQL 493

Query: 227 EEAMARLVEAYVALALMDEA 246
           +    R  +AY    L  +A
Sbjct: 494 D---PRHGKAYYHRGLARQA 510



 Score = 35.1 bits (80), Expect = 9.8,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 51/181 (28%), Gaps = 51/181 (28%)

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVAR-------KSLL--MSAFVQYSA--GKYQQAASLGE 118
           ++ F  A E         PF   A        + L+  + A  Q  A  G +Q A +   
Sbjct: 260 QERFQSAAEVLEALRPLLPFPQEATLGDVSVDQVLVTRLLARAQEKARQGDFQGAIADCT 319

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQ------MIRDVPYDQRATKLMLQYMSRIVERYTNS 172
             I   P++      Y   G +  +       I D     +       Y +R + RY   
Sbjct: 320 LAIQLDPQNSR---AYSQRGSARYKSGDLAGAIADYTQVIQLAGDARAYFNRGIARY--- 373

Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRY-------------YLKRGEYVAAIPRFQLVLAN 219
                          +L   E  +  Y             Y  RG     + + Q  + +
Sbjct: 374 ---------------RLEDYEGAVADYTQALGLNPQWAVAYYNRGNAYRQLNQQQQAIED 418

Query: 220 Y 220
           Y
Sbjct: 419 Y 419


>gi|303252344|ref|ZP_07338510.1| hypothetical protein APP2_1320 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|302648803|gb|EFL78993.1| hypothetical protein APP2_1320 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
          Length = 398

 Score = 40.5 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 82/212 (38%), Gaps = 34/212 (16%)

Query: 48  LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           LD+  D   ++++  K   A  F+    + +A  Y+     +      A  SL     V 
Sbjct: 103 LDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDE---PEFAVNSLTQLMTVY 159

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
               ++++A ++ E+ I   P++  +   +Y     YAQ I++   D       L  +S+
Sbjct: 160 QKTKEWKKAVNVAEKLIKIEPDTDKIPLSHYY--CEYAQAIKNEDLDGH-----LSALSK 212

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
            +E                      A   + +G YYL + ++ +A+  ++ +L    D  
Sbjct: 213 ALEYSPQC-----------------ARASILLGDYYLAQNQFQSALKNYERILQQDPD-- 253

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQER 256
              E + ++   Y  +A  D A   + LI+  
Sbjct: 254 FISEVIEKIKACY--MAENDLANYELFLIRAN 283


>gi|300897293|ref|ZP_07115729.1| tetratricopeptide repeat protein [Escherichia coli MS 198-1]
 gi|300358941|gb|EFJ74811.1| tetratricopeptide repeat protein [Escherichia coli MS 198-1]
          Length = 744

 Score = 40.5 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 79/238 (33%), Gaps = 40/238 (16%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA--RKS 96
              +S+   +D +        + ++A     +  +++A     Q     P +     R S
Sbjct: 30  SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWTQAAALQRQRLALDPGSVWITYRLS 89

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRD 147
                   + AG+  QA +L      Q P      Y Y  YL G       +++   I  
Sbjct: 90  Q-DL----WQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHGQDRAALAH---INS 141

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVE 195
           +P  Q +       +  +V R   S  V      +   G+   A             ++ 
Sbjct: 142 LPRAQWS-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLT 195

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +  +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 196 LADWAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 250


>gi|198282456|ref|YP_002218777.1| putative lipoprotein-like protein [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|218666270|ref|YP_002424653.1| lipoprotein, putative [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|198246977|gb|ACH82570.1| Putative lipoprotein-like protein [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|218518483|gb|ACK79069.1| lipoprotein, putative [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 612

 Score = 40.5 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 22/153 (14%), Positives = 45/153 (29%), Gaps = 24/153 (15%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF- 80
             L +   ++ C  +  +   S +      T    Q  + E+A   +   ++ +A + + 
Sbjct: 15  MTLALATGLSACASMPHKAPPSSNPPPVETTTAVSQTPLAERADQLMITGHYQEAAKDYI 74

Query: 81  ---NQCSRDFPFAGVARKSLLM----SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
                             + L     +A       K Q A  L  E +    +  N    
Sbjct: 75  HAAAAVRGR---------AQLDYLMKAAQASLKGQKPQVAILLANEVLRL--QHDNAS-- 121

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
             L G +     + +  DQ  T      +  I+
Sbjct: 122 --LRGAALWVRAQGLM-DQGQTPSAKGNLEEIL 151


>gi|149631897|ref|XP_001506546.1| PREDICTED: similar to KIAA0155 isoform 1 [Ornithorhynchus anatinus]
          Length = 1163

 Score = 40.5 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 41/273 (15%), Positives = 99/273 (36%), Gaps = 33/273 (12%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
           A L RA    E   +     ++T  +++A  +    E   +  +Y + + +     + Y 
Sbjct: 476 ASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYL 535

Query: 63  K-AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           +   +   + NF +A ++F +    ++D P    +    L  A       ++       E
Sbjct: 536 RLGAMARDKGNFYEASDWFKEALQINQDHP-DAWSLIGNLHLA-----KQEWGPGQKKFE 589

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ----RATKLMLQYMSRIVERYTNSPY 174
             + Q P ++N  Y    +G  + Q +     D+    R     L    +++     + Y
Sbjct: 590 RILKQ-PSTQNDTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLY 648

Query: 175 VKGA-------RFYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVL 217
                      + Y    R+  A  +E         + +   Y+++ +Y++A+  ++  L
Sbjct: 649 AANGIGAVLAHKGYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCL 708

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
             +   ++ E  +  L  A      + E ++ +
Sbjct: 709 RKFYKHQNTEVVLY-LARALFKCGKLQECKQTL 740


>gi|71401955|ref|XP_803945.1| mitochondrial import receptor subunit [Trypanosoma cruzi strain CL
           Brener]
 gi|70866644|gb|EAN82094.1| mitochondrial import receptor subunit, putative [Trypanosoma cruzi]
          Length = 403

 Score = 40.5 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 35/96 (36%), Gaps = 12/96 (12%)

Query: 50  SVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYS 106
           SV     + E Y  +    +K+ N  KA   +++  +  P +    + ++  M       
Sbjct: 100 SVPQKTEKAEEYRARGNDAMKQGNLRKAVRCYSEALKYEPSSSTLWSNRAAAMI-----Q 154

Query: 107 AGKYQQAASLGEEYITQYPESKNVDY----VYYLVG 138
             +   A S  +  I+  P +    Y      YL+G
Sbjct: 155 LDRGDDALSDAKRAISLDPMNVKAYYRKASALYLLG 190


>gi|322823269|gb|EFZ29059.1| hypothetical protein TCSYLVIO_4700 [Trypanosoma cruzi]
          Length = 703

 Score = 40.5 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 25/189 (13%), Positives = 53/189 (28%), Gaps = 41/189 (21%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++ + + K+ ++ +A + ++   R  P      K+L    F       Y  A    E  +
Sbjct: 270 QRGLAYRKKGDYLRAIDEYSAALRLDPNNF---KALFNRGFCSDKVEDYNAAIRDYEAAM 326

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              P      Y Y     +Y  +           K  +    + +    N+         
Sbjct: 327 KLEPG-----YAY-----TYYNLGISYDRWGGHYKEAIAMFDKAIALDGNN--------- 367

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAY 237
                            +Y  RG     + +++  + +Y+ A        +A       Y
Sbjct: 368 ---------------ADFYHNRGFSQRKLGKYREAVKDYTMALSLDPQHFKAYYNRAFCY 412

Query: 238 VALALMDEA 246
             L     A
Sbjct: 413 DKLGEGANA 421


>gi|300870192|ref|YP_003785063.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000]
 gi|300687891|gb|ADK30562.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000]
          Length = 600

 Score = 40.5 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 72/199 (36%), Gaps = 29/199 (14%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           +E ++ KA +Y+ + S+   +   A +++ + A   Y   K  +A    ++ I      K
Sbjct: 278 EENDYDKAIKYYYRLSKIKNYTN-AYEAIGLLANAYYKGSKLDEAEDNYKKIIML---DK 333

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP-----------YVKG 177
             D   Y   +   + + D+ Y Q++    L+Y   I    TN+            Y   
Sbjct: 334 KDD--LYKTAL---ERLGDITYRQKSFTASLKYYKEIYTIETNNAIFKPRLGELELYYGN 388

Query: 178 ARFYVTVGRNQLAAK------EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
           +   + +  N +            +  YY   G Y  A+  +   L+ Y +     E++ 
Sbjct: 389 SDRGIKLLENSIKESIGNAFPSRTLAIYYESIGNYNEALNYYNYTLSKYPN---DRESLY 445

Query: 232 RLVEAYVALALMDEAREVV 250
           R    Y       +A E +
Sbjct: 446 RAGMLYYRNREYKKANESL 464


>gi|262276101|ref|ZP_06053910.1| TPR repeat-containing protein [Grimontia hollisae CIP 101886]
 gi|262219909|gb|EEY71225.1| TPR repeat-containing protein [Grimontia hollisae CIP 101886]
          Length = 244

 Score = 40.5 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 50/147 (34%), Gaps = 16/147 (10%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
           R+        S +  + +   Y+ AV   LK++N++ A + FN     +P +     +  
Sbjct: 108 REPDGKSSEASYSTNQSENAEYDAAVNLILKKKNYAGAVDAFNAFLTKYPESIYKPNAHY 167

Query: 99  MSAFVQYSAGKYQQAA---SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
               + +S  +   A    +   ++      SK  D     +G+   +            
Sbjct: 168 WLGQLYFSKSQLDDAKKNFTAVSQFAK---SSKRAD-ALLKLGIIAERQSDGAS------ 217

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYV 182
                   ++V+ Y  +   K A+  +
Sbjct: 218 --AKALFEQVVKEYPGTTTAKQAQKQL 242



 Score = 35.9 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 38/124 (30%), Gaps = 23/124 (18%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               Y  A      ++T+YPES      +Y +G  Y    +         K     +S+ 
Sbjct: 138 KKKNYAGAVDAFNAFLTKYPESIYKPNAHYWLGQLYFSKSQLDD-----AKKNFTAVSQF 192

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
            +    S     A   + +   + +                 +A   F+ V+  Y     
Sbjct: 193 AK----SSKRADALLKLGIIAERQSDG--------------ASAKALFEQVVKEYPGTTT 234

Query: 226 AEEA 229
           A++A
Sbjct: 235 AKQA 238


>gi|260777337|ref|ZP_05886231.1| TPR domain protein in aerotolerance operon [Vibrio coralliilyticus
           ATCC BAA-450]
 gi|260607003|gb|EEX33277.1| TPR domain protein in aerotolerance operon [Vibrio coralliilyticus
           ATCC BAA-450]
          Length = 616

 Score = 40.5 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 40/118 (33%), Gaps = 9/118 (7%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
             +  L     +A   L      +S  +  +      Y  E Y++A    + + +     
Sbjct: 318 FRRGFLFSMIILAYPLLSPKPAMASAWLNSNQQAKQLYDAEQYQEAADLFENKEWQG-IA 376

Query: 79  YFNQCSRDFPFAGVARK------SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
            +     +FP A  A K           A       ++ QA SL E+ + Q P +++ 
Sbjct: 377 QYQA--GNFPAAINALKDSQTLNGKYNLANAYAQNREFDQAISLYEDVLKQDPSNEDA 432


>gi|223937044|ref|ZP_03628952.1| TPR repeat-containing protein [bacterium Ellin514]
 gi|223894325|gb|EEF60778.1| TPR repeat-containing protein [bacterium Ellin514]
          Length = 466

 Score = 40.5 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 31/231 (13%), Positives = 65/231 (28%), Gaps = 43/231 (18%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            +   +  ++++ KA   ++Q  +  P   +    +     A+     G   +A     E
Sbjct: 167 SRGRAYAMKRDWDKAIADYDQVVKLNPKQVSAYNSRG---LAYA--MKGDMDKAIRDLSE 221

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT------NSP 173
            I   P  K+    Y   G+SYA                +   S +++         +S 
Sbjct: 222 VIKLNP--KDAP-AYGSRGLSYAMK--------GDWDKAVSDFSELIKLKPTDSIGYDSR 270

Query: 174 YVKGARFYVTVGRNQLAAKEVEI-------------GRYYLKRGEYVAAIPRFQLVLANY 220
               A          LA     I             G  Y+ +G++  AI   +    + 
Sbjct: 271 --ATAYQNQGKLDEALADFSEAIKLNDKDAGAFHNRGLIYVGKGDWEKAI---ENFSKSI 325

Query: 221 SDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQERYPQGYWARYVETLV 270
                  +A A+   AY       +   ++   ++           +    
Sbjct: 326 QLNPQDADAFAKRGYAYYQKGEYQKGIDDINEALRLNPKDAESYNNLAWFR 376



 Score = 35.9 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 28/217 (12%), Positives = 61/217 (28%), Gaps = 42/217 (19%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           +       ++ ++  A   ++   +  P       +           G +       +E 
Sbjct: 31  FTIGKKAQEDGDYELAISCWSSVLKLQPTND---AAFFNRGMAYTQKGDFTSGIHDFDET 87

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR-ATKLMLQYMSRIVERYT--------- 170
           I   PE           G +Y    R   YDQ+   +  +   +  ++            
Sbjct: 88  IRLNPE-----------GRAYDN--RGNLYDQKGEVEKAISDYTEAIKLNPKDAWAYAKR 134

Query: 171 --------NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
                   +S               + A      GR Y  + ++  AI  +  V+     
Sbjct: 135 AADYHKKGDSEKAISDYTQAIQINPKDANYYDSRGRAYAMKRDWDKAIADYDQVVKLNPK 194

Query: 223 --AEHAEEAMARLVEAYVALALMDEA-REVVSLIQER 256
             + +    +     AY     MD+A R++  +I+  
Sbjct: 195 QVSAYNSRGL-----AYAMKGDMDKAIRDLSEVIKLN 226


>gi|115378273|ref|ZP_01465441.1| hypothetical adventurous gliding motility protein U [Stigmatella
           aurantiaca DW4/3-1]
 gi|310821097|ref|YP_003953455.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|115364715|gb|EAU63782.1| hypothetical adventurous gliding motility protein U [Stigmatella
           aurantiaca DW4/3-1]
 gi|309394169|gb|ADO71628.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1]
          Length = 1209

 Score = 40.5 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 78/210 (37%), Gaps = 20/210 (9%)

Query: 45  DVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           D Y     +   + ++ Y+ AV+     +F  A   F +    +P    +R +  ++ FV
Sbjct: 615 DTYNSLYPNNPDEIDLRYQAAVILYDRNHFVDAARRFGEIITKYPEERRSRDAADLTMFV 674

Query: 104 QYSAGKYQQAASLGEEYITQY----PESKNVDYVYYLVGMSYAQMIRDVP-YDQRATKLM 158
             S  ++Q+  +L  +++       P ++    V  +V  S  + + ++    ++  K  
Sbjct: 675 LESREEWQELNTLSRQFLGNKKLSKPGTEFAARVAKVVEGSQYKWVDEIVYRKEQNPKKA 734

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
            +     V  +  S     A  Y  +   + A          L RG  V A  R   VL 
Sbjct: 735 GELFLSFVTEFPKSENADRALTYAMIIFQEAAE---------LDRG--VEAGTR---VLN 780

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEARE 248
            Y D+  + +    +   Y  +A   +A E
Sbjct: 781 EYPDSIFSLKVRYTMAGFYEKMAEFQKAAE 810



 Score = 38.6 bits (89), Expect = 0.95,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 72/245 (29%), Gaps = 36/245 (14%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
            D+  D          ++ +     +     +A + + Q  RDFP +     + +     
Sbjct: 193 EDLLRDYPKYEHMDEVLFAQGYNLNELNRGPEAVKRYQQLIRDFPQSQFVPDAYIQLGNY 252

Query: 104 QYSAGKYQQAASLGE-----EYITQYPESKNVDYVYYLVGMSYAQM---IRDVPYDQRAT 155
            +   K   A    E          Y       Y  Y +             +   Q A 
Sbjct: 253 FFENNKLAPARENYEKARDTRVPKIY------AYAIYKLAWCDFNSGGYEDGLKKLQEAV 306

Query: 156 KLML-----------QYMSRIVERYTNSPYVKGARFYVTV---GRNQ---LAAKEVEIGR 198
           +              + ++ +   Y      K A  Y       + Q   +A   V +  
Sbjct: 307 EFAETQGEELGDLKTEALNDLTVFYVQLDQPKEALAYFKAKAPAKRQGRLIAKTAVGLAD 366

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY- 257
                G + +AI  F+ ++ +     +A E    +V +Y  L    + R  +  + + Y 
Sbjct: 367 ----AGHFDSAILMFRTLVDDAPMGPNAPEYQQAIVRSYEGLRQRTQVRTEMKRMVDLYR 422

Query: 258 PQGYW 262
           P G W
Sbjct: 423 PGGTW 427



 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 50/140 (35%), Gaps = 22/140 (15%)

Query: 58  REVY---EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY-QQA 113
            E+Y    K +  L+   F  A + F+                         + +Y  + 
Sbjct: 136 SELYWEKSKYLYRLEMDRFLAAEKAFDAAEAR---GEKVEAPQQD----HRDSERYRAET 188

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
            SL E+ +  YP+ +++D V +  G +  ++ R            ++   +++  +  S 
Sbjct: 189 MSLYEDLLRDYPKYEHMDEVLFAQGYNLNELNRGP--------EAVKRYQQLIRDFPQSQ 240

Query: 174 YVKGARFYV---TVGRNQLA 190
           +V  A   +       N+LA
Sbjct: 241 FVPDAYIQLGNYFFENNKLA 260


>gi|75907401|ref|YP_321697.1| hypothetical protein Ava_1178 [Anabaena variabilis ATCC 29413]
 gi|75701126|gb|ABA20802.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
          Length = 280

 Score = 40.5 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 22/176 (12%), Positives = 51/176 (28%), Gaps = 37/176 (21%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSV---------TDVRYQREVYEKAVLFLKEQ 71
           K  LTI    A+  +      ++++V +  +         T+     + Y +      + 
Sbjct: 14  KRVLTIGVLTALSAITSVSCSNNKEVLVTEIGVNPPSRRTTNNSQAGQFYVQGQRQHAQG 73

Query: 72  NFSKAYEYFNQCSRDFP-FAGVARKSLLMSAF-----VQYSAGKYQQAASLGEEYITQYP 125
           +   A   +++     P +           A+       +  G  Q+A +   E I    
Sbjct: 74  DSQGAIASYDKAIGLDPDYGA---------AYRGRGLAYFDLGDKQKAIADYNEAIRL-- 122

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
            S N    +   G + A +  +           +   +  +    N  Y +     
Sbjct: 123 -SPNDAEAFNSRGNARASLGDNAG--------AITDYNEAIRLSPN--YAEAYNNR 167


>gi|15225686|ref|NP_180804.1| calcium-binding EF hand family protein [Arabidopsis thaliana]
 gi|75160474|sp|Q8S8L9|Y2245_ARATH RecName: Full=Uncharacterized TPR repeat-containing protein
           At2g32450
 gi|20197430|gb|AAM15073.1| putative O-GlcNAc transferase [Arabidopsis thaliana]
 gi|28393656|gb|AAO42246.1| putative O-GlcNAc transferase [Arabidopsis thaliana]
 gi|28973559|gb|AAO64104.1| putative O-GlcNAc transferase [Arabidopsis thaliana]
 gi|330253593|gb|AEC08687.1| Calcium-binding tetratricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 802

 Score = 40.5 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 51/158 (32%), Gaps = 17/158 (10%)

Query: 14  AWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF 73
            WAY L +  + +  S+    +V    +  R+  +   T  R  + +            +
Sbjct: 299 QWAYLLPQIYVNLGISLEGEGMVLSACEYYREAAILCPTHYRALKLL---GSALFGVGEY 355

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
             A +        +     A  +    A   ++ G+ ++A  + +  I   P   +    
Sbjct: 356 RAAVKALE--EAIYLKPDYA-DAHCDLASSLHAMGEDERAIEVFQRAIDLKPGHVD---A 409

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            Y +G  Y         D    +   +  +R++  + N
Sbjct: 410 LYNLGGLYM--------DLGRFQRASEMYTRVLAVWPN 439


>gi|259149343|emb|CAY86147.1| Ctr9p [Saccharomyces cerevisiae EC1118]
 gi|323346661|gb|EGA80945.1| Ctr9p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 1077

 Score = 40.5 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 52/156 (33%), Gaps = 33/156 (21%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARK------------------------------SLL 98
            + ++ KA + + +  +  PF   A +                                L
Sbjct: 676 SKHSYLKAIQLYQKILQVDPFNIFAAQGLAIIFAESKRLGPALEILRKVRDSLDNEDVQL 735

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI---RDVPYDQRAT 155
             A       +Y +A    E  + ++   K   ++  L+G ++       R V + Q+A 
Sbjct: 736 NLAHCYLEMREYGKAIENYELVLKKFDNEKTRPHILNLLGRAWYARAIKERSVNFYQKAL 795

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
           +     +   V+  + S ++   +F + +   Q+A 
Sbjct: 796 ENAKTALDLFVKESSKSKFIHSVKFNIALLHFQIAE 831


>gi|209525653|ref|ZP_03274190.1| sulfotransferase [Arthrospira maxima CS-328]
 gi|209493822|gb|EDZ94140.1| sulfotransferase [Arthrospira maxima CS-328]
          Length = 729

 Score = 40.5 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 37/127 (29%), Gaps = 17/127 (13%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            Y   +  L  + +S+A E FNQ     P    +        +  +  G+  QA     +
Sbjct: 294 YYGLGLALLNLRQWSEAIEVFNQAINLNPDCFWSYN---NLGYCLFKQGEIPQAIDAYRK 350

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            I        +  VY  +G        D    Q+     +      ++   +      A 
Sbjct: 351 AIAI---DPEIPEVYIRLG--------DTLLQQQDIDGAIAAYLDAIKAQPDGE---IAY 396

Query: 180 FYVTVGR 186
             +   R
Sbjct: 397 IKLRHLR 403


>gi|151945491|gb|EDN63732.1| cln three (cln3) requiring protein [Saccharomyces cerevisiae
           YJM789]
 gi|190407208|gb|EDV10475.1| CTR9 protein [Saccharomyces cerevisiae RM11-1a]
 gi|207341482|gb|EDZ69529.1| YOL145Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256270134|gb|EEU05364.1| Ctr9p [Saccharomyces cerevisiae JAY291]
          Length = 1077

 Score = 40.5 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 52/156 (33%), Gaps = 33/156 (21%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARK------------------------------SLL 98
            + ++ KA + + +  +  PF   A +                                L
Sbjct: 676 SKHSYLKAIQLYQKILQVDPFNIFAAQGLAIIFAESKRLGPALEILRKVRDSLDNEDVQL 735

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI---RDVPYDQRAT 155
             A       +Y +A    E  + ++   K   ++  L+G ++       R V + Q+A 
Sbjct: 736 NLAHCYLEMREYGKAIENYELVLKKFDNEKTRPHILNLLGRAWYARAIKERSVNFYQKAL 795

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
           +     +   V+  + S ++   +F + +   Q+A 
Sbjct: 796 ENAKTALDLFVKESSKSKFIHSVKFNIALLHFQIAE 831


>gi|126657057|ref|ZP_01728228.1| Tetratricopeptide TPR_4 [Cyanothece sp. CCY0110]
 gi|126621600|gb|EAZ92310.1| Tetratricopeptide TPR_4 [Cyanothece sp. CCY0110]
          Length = 543

 Score = 40.5 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 47/137 (34%), Gaps = 32/137 (23%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++     +  N++ A E F+      PF               Y    ++QA    +++ 
Sbjct: 366 QQGRWLFERGNYADAAERFDN-----PF--W-------KGIAYYINKDFEQAT---QQFS 408

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              P++  +   Y+ +G +YAQ        Q   K  L+   R +     S Y       
Sbjct: 409 EIKPKTPEI---YFNLGNAYAQ--------QEDYKNALKNYDRALGM--RSDYADAQNNR 455

Query: 182 VTVGRNQLAAKEVEIGR 198
                 +L  KE E+ +
Sbjct: 456 --DLVQKLLEKEEELAK 470


>gi|85110209|ref|XP_963316.1| hypothetical protein NCU06842 [Neurospora crassa OR74A]
 gi|28881189|emb|CAD70370.1| related to TPR-containing protein Mql1 [Neurospora crassa]
 gi|28924992|gb|EAA34080.1| conserved hypothetical protein [Neurospora crassa OR74A]
 gi|49618689|gb|AAT67994.1| RCM-1 [Neurospora crassa]
          Length = 917

 Score = 40.5 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 46/146 (31%), Gaps = 28/146 (19%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSA 107
             D    +  Y     +++ Q + KAYE + Q        P              + Y  
Sbjct: 288 AADQTDAQSWYLLGRCYMQLQKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQI 341

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY---AQMIRDVPYDQRATKLMLQYMSR 164
            +Y+ A       I   P    +  V+Y +G  Y      I D           L    R
Sbjct: 342 NQYRDALDAYSRAIRLNP---FISEVWYDLGTLYESCNNQISD----------ALDAYQR 388

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLA 190
             E   N+P++   +  + + R+  A
Sbjct: 389 AAELDPNNPHI---KTRLQLLRSGQA 411


>gi|323352275|gb|EGA84810.1| Ctr9p [Saccharomyces cerevisiae VL3]
          Length = 1040

 Score = 40.5 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 52/156 (33%), Gaps = 33/156 (21%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARK------------------------------SLL 98
            + ++ KA + + +  +  PF   A +                                L
Sbjct: 676 SKHSYLKAIQLYQKILQVDPFNIFAAQGLAIIFAESKRLGPALEILRKVRDSLDNEDVQL 735

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI---RDVPYDQRAT 155
             A       +Y +A    E  + ++   K   ++  L+G ++       R V + Q+A 
Sbjct: 736 NLAHCYLEMREYGKAIENYELVLKKFDNEKTRPHILNLLGRAWYARAIKERSVNFYQKAL 795

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
           +     +   V+  + S ++   +F + +   Q+A 
Sbjct: 796 ENAKTALDLFVKESSKSKFIHSVKFNIALLHFQIAE 831


>gi|323492743|ref|ZP_08097887.1| hypothetical protein VIBR0546_00695 [Vibrio brasiliensis LMG 20546]
 gi|323313118|gb|EGA66238.1| hypothetical protein VIBR0546_00695 [Vibrio brasiliensis LMG 20546]
          Length = 389

 Score = 40.5 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 26/60 (43%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A L+L +QNF +A +++ Q  +  P    A    L  A   Y   ++ +     + Y+  
Sbjct: 106 ADLYLNQQNFEQAIKHYYQLIKTAPETQSADDIWLRIAQAHYQIEQWSKVIPATDRYLKL 165


>gi|323307343|gb|EGA60622.1| Ctr9p [Saccharomyces cerevisiae FostersO]
          Length = 1040

 Score = 40.5 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 52/156 (33%), Gaps = 33/156 (21%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARK------------------------------SLL 98
            + ++ KA + + +  +  PF   A +                                L
Sbjct: 676 SKHSYLKAIQLYQKILQVDPFNIFAAQGLAIIFAESKRLGPALEILRKVRDSLDNEDVQL 735

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI---RDVPYDQRAT 155
             A       +Y +A    E  + ++   K   ++  L+G ++       R V + Q+A 
Sbjct: 736 NLAHCYLEMREYGKAIENYELVLKKFDNEKTRPHILNLLGRAWYARAIKERSVNFYQKAL 795

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
           +     +   V+  + S ++   +F + +   Q+A 
Sbjct: 796 ENAKTALDLFVKESSKSKFIHSVKFNIALLHFQIAE 831


>gi|300727141|ref|ZP_07060560.1| putative BatD protein [Prevotella bryantii B14]
 gi|299775685|gb|EFI72276.1| putative BatD protein [Prevotella bryantii B14]
          Length = 868

 Score = 40.5 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 32/108 (29%), Gaps = 16/108 (14%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
            L +F  + V        +SS D     + D  Y R             N+ +A + +N+
Sbjct: 617 LLLLFAFVMVSLSAQAAPKSSADAASKKIADSEYLR------------GNYHQAIKDYNE 664

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
             +     GV+           Y      QA    E      P   ++
Sbjct: 665 ILKR----GVSADIYYNLGNSYYRTDNLTQAILAYERAYLLAPGDADI 708


>gi|218438120|ref|YP_002376449.1| hypothetical protein PCC7424_1130 [Cyanothece sp. PCC 7424]
 gi|218170848|gb|ACK69581.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424]
          Length = 271

 Score = 40.5 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 37/120 (30%), Gaps = 11/120 (9%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           +    +     +C L       ++     S        E+Y K V  L   ++  A   F
Sbjct: 6   RLMGILAIFTYLCSLSPLAHAQNQ----PSQPQELNAVEIYNKGVDKLSAGDYQGAIADF 61

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV----DYVYYL 136
            Q  +  P       +    A+     G ++ A +   + +   P          YVY+L
Sbjct: 62  TQAIQLAPNDA---DAYYNRAYGYLILGNFEGAIADYTKAVEINPNYTYAYGNRCYVYFL 118


>gi|158334579|ref|YP_001515751.1| TPR domain-containing protein [Acaryochloris marina MBIC11017]
 gi|158304820|gb|ABW26437.1| TPR domain protein [Acaryochloris marina MBIC11017]
          Length = 783

 Score = 40.5 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 67/219 (30%), Gaps = 51/219 (23%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS-------AGK 109
              +  +A       +   A   F++     P            A   ++        GK
Sbjct: 30  PDALINRANKRATNGDLDGALGDFDEAIALNP----------AKATAYFNRGFLFNSLGK 79

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           ++ A     E I   P   + D  Y+  G SY          +   +  +Q  S+ +   
Sbjct: 80  FEAAIHDFSEAIELLP---DYDEAYFQRGNSY--------RQRGEFQRAIQDYSQAIRI- 127

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRY-------------YLKRGEYVAAIPRFQLV 216
             +PY   A +     R +L      +  +             Y +RG +++     +  
Sbjct: 128 --NPYCIKAYYKRADSRAELGDHPGALTDFSQVILRLPKDANAYCQRGIFLSQSGELEKA 185

Query: 217 LANYSDAEHAEEAMARLVEAYVA----LALMDEAREVVS 251
           + ++      E    RL +AY      LA M EA +   
Sbjct: 186 IEDF--TSAIEHN-PRLADAYFHRGYCLAQMGEAEKASK 221


>gi|332259103|ref|XP_003278629.1| PREDICTED: tetratricopeptide repeat protein 38-like [Nomascus
           leucogenys]
          Length = 551

 Score = 40.5 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 45/148 (30%), Gaps = 29/148 (19%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQ----------REVYEKAVLFLKEQNFSKAYEYF 80
               L+G       D  L+       +           +++  AV      NF KA E +
Sbjct: 72  TGLVLIGTGSSVKLDKELELAVKTMVEISRTQPLTRREQLHVSAVETFANGNFPKACELW 131

Query: 81  NQCSRDFPFAGVARKSLLMSA-----FVQYSAGKYQQAASLGEEYITQYPE-SKNVDYVY 134
            Q  +D P          M A        +  G  +Q           YP  + ++    
Sbjct: 132 EQILQDHPTD--------MLALKFSHDAYFYLGYQEQMRDSVAR---IYPFWTPDIPLSS 180

Query: 135 YLVGMSYAQMIRDVPYDQ--RATKLMLQ 160
           Y+ G+    ++    YDQ  +  K  L 
Sbjct: 181 YVKGIYSFGLMETNFYDQAEKLAKEALS 208


>gi|328542481|ref|YP_004302590.1| Tetratricopeptide repeat domain protein [polymorphum gilvum
           SL003B-26A1]
 gi|326412228|gb|ADZ69291.1| Tetratricopeptide repeat domain protein [Polymorphum gilvum
           SL003B-26A1]
          Length = 215

 Score = 40.5 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 37/123 (30%), Gaps = 18/123 (14%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLG 117
           + E+A   LK  N   A +  +      P +     R++        Y    Y ++    
Sbjct: 98  LMERAASALKAGNHPLALDLLDTVVSLRPDYTEGWNRRAT-----AHYLLQDYGRSLVDI 152

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           E  +   P          L G+     I     D+RA    LQ   R +E        + 
Sbjct: 153 ERVLALEPRHWGA-----LSGL----GIIQRQLDERAA--ALQSFRRALEINPGLDTARK 201

Query: 178 ARF 180
           A  
Sbjct: 202 AVE 204


>gi|319902948|ref|YP_004162676.1| Tetratricopeptide TPR_1 repeat-containing protein [Bacteroides
           helcogenes P 36-108]
 gi|319417979|gb|ADV45090.1| Tetratricopeptide TPR_1 repeat-containing protein [Bacteroides
           helcogenes P 36-108]
          Length = 283

 Score = 40.5 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 26/66 (39%), Gaps = 10/66 (15%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           E     L   ++S A +       D       +++LLM A++      Y+ A +  E ++
Sbjct: 106 ELGKDELARMDYSLALD----IEAD------NQEALLMRAYIYRQKRDYKAARADYERFL 155

Query: 122 TQYPES 127
              P S
Sbjct: 156 KLNPLS 161


>gi|282896805|ref|ZP_06304811.1| Lytic transglycosylase, catalytic [Raphidiopsis brookii D9]
 gi|281198214|gb|EFA73104.1| Lytic transglycosylase, catalytic [Raphidiopsis brookii D9]
          Length = 726

 Score = 40.5 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 43/111 (38%), Gaps = 3/111 (2%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRY-QREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
           ++ +        +SS+   +    D    +R  Y  A  +++      A E      +D+
Sbjct: 59  AVGMTIAQSLPERSSKLREIAEKGDSPDRERARYVLASDYIQTNQGKPALELLVGLEKDY 118

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
           P   +A   LL  A  Q   G+   A+ L +  +  YP+S       YL+G
Sbjct: 119 P--VLAPYILLKQAQAQDMLGEKGLASDLRQRVLRDYPKSPAAVKAMYLIG 167



 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 71/216 (32%), Gaps = 28/216 (12%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           +  + +Y  A     ++    A   + Q  + FP       +LL  A         + A 
Sbjct: 261 QTAKNLYRTARGLQLDKKRESAIVIYKQQVKLFPKEKETGTALLRLA----EMAPGRDAI 316

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
           +  ++ I Q+P                 +++  +  +Q       Q    ++ +Y++S  
Sbjct: 317 AYLDQIIAQFPS--QAPQALAQKA----KLLTSLKDNQS----ANQTWKLLLSKYSSSDA 366

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
               R+   + +               K  +YV A    Q +      +  A  A   + 
Sbjct: 367 ATEYRWQTALTK--------------AKNRDYVGAWEWAQPIPTQNPASILAPRASFWVG 412

Query: 235 EAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
           +    L   +EAR+    +   +PQ Y+A     ++
Sbjct: 413 KWASLLGKNEEARKSYEYVLANFPQSYYAWRSARIL 448


>gi|269967694|ref|ZP_06181744.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|269827781|gb|EEZ82065.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 250

 Score = 40.5 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 45/127 (35%), Gaps = 15/127 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            Q   D+   +R     +    +  + Y +S Y               A     +G+ Y 
Sbjct: 137 YQNAVDLILKKRDYTGAIAAFQQFQKDYPDSTYS--------------ANSHYWLGQLYF 182

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + +   A+  F  V+ +Y D+    +A+ +L E         +A++    + + YP   
Sbjct: 183 AKKQDEDAVKSFAAVV-SYKDSNKRADALLKLGEIAERNNNAAQAKKYYQQVVDEYPGSA 241

Query: 262 WARYVET 268
            A+   +
Sbjct: 242 SAKLASS 248



 Score = 35.9 bits (82), Expect = 6.8,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 51/134 (38%), Gaps = 10/134 (7%)

Query: 50  SVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             T    ++  Y+ AV   LK+++++ A   F Q  +D+P +  +  S      + ++  
Sbjct: 126 QYTPNVDEQTAYQNAVDLILKKRDYTGAIAAFQQFQKDYPDSTYSANSHYWLGQLYFAKK 185

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           + + A       ++    +K  D        +  ++      +  A     +Y  ++V+ 
Sbjct: 186 QDEDAVKSFAAVVSYKDSNKRAD--------ALLKLGEIAERNNNAA-QAKKYYQQVVDE 236

Query: 169 YTNSPYVKGARFYV 182
           Y  S   K A   +
Sbjct: 237 YPGSASAKLASSKL 250


>gi|298529797|ref|ZP_07017200.1| Tetratricopeptide TPR_2 repeat protein [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298511233|gb|EFI35136.1| Tetratricopeptide TPR_2 repeat protein [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 568

 Score = 40.5 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 32/232 (13%), Positives = 69/232 (29%), Gaps = 36/232 (15%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K  L I  +  V       +Q         +T        Y K++ +    +  KA  
Sbjct: 1   MGKKILVIMIAAVVLGCAPKTQQPETAKTGRELTPQAQVTYHYLKSLDYQAAGDHEKAAL 60

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
              +     P    + +     A      G+ Q+A  + ++    YP +  +   Y+   
Sbjct: 61  ALEKALVLGP----SVRLYQDLAREYLRQGEKQKAVDILQDATGIYPRTPEL---YFQ-- 111

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           M+   +++    D+      L+    +V         +    Y  +              
Sbjct: 112 MAEFYLVKG---DRSGAVKALEKYKDLV--------PEDLDVYEDL------------AA 148

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
           +Y++  +Y  A+     +L      E   E    +  A   L    +A   +
Sbjct: 149 FYIEMRDYAGAV----DLLQEIPPDEMTPEMHYYMGRAKSELGEKTDAVAYL 196


>gi|149277134|ref|ZP_01883276.1| hypothetical protein PBAL39_09601 [Pedobacter sp. BAL39]
 gi|149232011|gb|EDM37388.1| hypothetical protein PBAL39_09601 [Pedobacter sp. BAL39]
          Length = 580

 Score = 40.5 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 17/128 (13%), Positives = 36/128 (28%), Gaps = 7/128 (5%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++Y  A +       +KA    +     FP   +    L+  + +      +  A++  +
Sbjct: 454 KMYADAEMLEFRNQPAKALAKLDSIPLVFPNNSLLDDILMAKSRIYIKGKDFIAASAALK 513

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
             I +   S   D            +           +       +++  Y  S Y   A
Sbjct: 514 ALIEKQSSSIWTDDAL-------FNLADLCEQKLGDNEQAKTLYQKLITDYPGSMYTAEA 566

Query: 179 RFYVTVGR 186
           R      R
Sbjct: 567 RKRFRKLR 574



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 30/66 (45%), Gaps = 1/66 (1%)

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE-AYVALALMDEAREVVSLIQER 256
           R Y+K  +++AA    + ++   S +   ++A+  L +     L   ++A+ +   +   
Sbjct: 497 RIYIKGKDFIAASAALKALIEKQSSSIWTDDALFNLADLCEQKLGDNEQAKTLYQKLITD 556

Query: 257 YPQGYW 262
           YP   +
Sbjct: 557 YPGSMY 562


>gi|120435191|ref|YP_860877.1| TPR repeat-containing protein [Gramella forsetii KT0803]
 gi|117577341|emb|CAL65810.1| secreted protein containing tetratricopeptide repeats [Gramella
           forsetii KT0803]
          Length = 417

 Score = 40.5 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 38/114 (33%), Gaps = 13/114 (11%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAV-LFLKEQNFSKAYEY-FN 81
           L I F + + FL  +   S      +  TD     E++ KA      E N+ KA E    
Sbjct: 3   LKITFPLLLIFLTLFSSVSVNAQEEEFTTD-----ELFVKARTAAFDEDNYPKAIELTLQ 57

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN--VDYV 133
              +    +  A    +    +     K   A    E  + + P  ++  + Y 
Sbjct: 58  ALDKS---SSYA-DVRIFLGRLYTWTDKVDSARVAFERVLEENPGHQDGSLAYA 107


>gi|94968893|ref|YP_590941.1| von Willebrand factor, type A [Candidatus Koribacter versatilis
           Ellin345]
 gi|94550943|gb|ABF40867.1| von Willebrand factor, type A [Candidatus Koribacter versatilis
           Ellin345]
          Length = 628

 Score = 40.5 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 20/168 (11%), Positives = 53/168 (31%), Gaps = 20/168 (11%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           ++ F ++    L   +   +R  + ++++ D              L  ++++ A     Q
Sbjct: 114 VSAFNALGAAHLGLGQSDEARAAFAEAISLDDHLPNSYLNMGCAELALKDYAGAERDITQ 173

Query: 83  CSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE-SKNVDYVYYLVGM 139
            S   P  F     +     A+ QY    YQ   +  +     +         V++    
Sbjct: 174 ASSMAPLDF-----QVKAALAYSQYMNNNYQAVVATAD---DVHARKHSGAALVHFYAAA 225

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           ++          Q       + +  +++    SP    A+  +   ++
Sbjct: 226 AWDA--------QGNPAYAQRELRLLMKEDPKSPAAIQAKSLMQQLQD 265


>gi|75908225|ref|YP_322521.1| hypothetical protein Ava_2004 [Anabaena variabilis ATCC 29413]
 gi|75701950|gb|ABA21626.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
          Length = 236

 Score = 40.5 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 29/95 (30%), Gaps = 31/95 (32%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAG--------------VARKSL------------ 97
           A+   ++ N+S+A    NQ     P                   +K++            
Sbjct: 48  ALRSAQQGNYSEAIALLNQLINRHPDNAVDYNNRGLIYFQCGHTQKAIQDYNTALHLNPD 107

Query: 98  LMSAF---VQYSA--GKYQQAASLGEEYITQYPES 127
           L SA+     Y A  G+   A +  +  I   P  
Sbjct: 108 LASAYNNRANYYAACGQLAAALADYDRAIDLNPRH 142


>gi|313124898|ref|YP_004035162.1| tetratricopeptide hypothetical protein [Halogeometricum borinquense
           DSM 11551]
 gi|312291263|gb|ADQ65723.1| tetratricopeptide repeat protein [Halogeometricum borinquense DSM
           11551]
          Length = 248

 Score = 40.5 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 12/106 (11%), Positives = 31/106 (29%), Gaps = 11/106 (10%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            K     + + + +A   + +  R    +  A  +    A+  +  G+ ++A    E  +
Sbjct: 107 NKGAAHAQLEEYDEAIGAYKEALRIDDDSEHAASAETNLAYALWQFGETEEALHHAERAV 166

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
                       +Y  G  +    R +  D       +      + 
Sbjct: 167 EI---DPRFAQAWYNRG--FFLQERGLSED------AVNAFDNAIR 201



 Score = 35.1 bits (80), Expect = 9.5,   Method: Composition-based stats.
 Identities = 26/204 (12%), Positives = 59/204 (28%), Gaps = 33/204 (16%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAG 108
             D     ++ +  + +++   F +A E F +    F    +  A+++ +          
Sbjct: 58  AKDQVDVEQLVDVGLSYMQINRFEEATETFERA-AQFADEDSLEAQEAWVNKGAAHAQLE 116

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +Y +A    +E +                          +  D          ++  + +
Sbjct: 117 EYDEAIGAYKEALR-------------------------IDDDSEHAASAETNLAYALWQ 151

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA-NYSDAEHAE 227
           +  +               + A      G +  +RG    A+  F   +     +A+  E
Sbjct: 152 FGETEEALHHAERAVEIDPRFAQAWYNRGFFLQERGLSEDAVNAFDNAIRLGMRNADVLE 211

Query: 228 EAMARLVEAYVALALMDEAREVVS 251
           E       A   L   DEA +V  
Sbjct: 212 EK----ARALEELGREDEAEQVQQ 231


>gi|149633153|ref|XP_001512517.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
          Length = 419

 Score = 40.5 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 1/75 (1%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSV-TDVRYQREVYEKAVLFLKEQNFSKAYEY 79
            F L  F ++A+  L      +S D  L ++  D   ++ +Y +    L    F  A E 
Sbjct: 281 SFLLAAFLNLAMPVLSPLGHTASHDACLAALGLDGANEKGLYRRGKARLLMNEFDLAIED 340

Query: 80  FNQCSRDFPFAGVAR 94
           F +  +  P    AR
Sbjct: 341 FERVLKVNPQNRAAR 355


>gi|81300940|ref|YP_401148.1| soluble lytic transglycosylase [Synechococcus elongatus PCC 7942]
 gi|81169821|gb|ABB58161.1| probable soluble lytic transglycosylase [Synechococcus elongatus
           PCC 7942]
          Length = 690

 Score = 40.5 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 64/184 (34%), Gaps = 31/184 (16%)

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           E + Q    +P + V  +++L         G++  A +  + +   YP S  +       
Sbjct: 133 ETWRQLLNTYPESPVQAEAVLAL-------GQWDLAPATIQRWPR-YPASNELA------ 178

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
                Q+ +  P + +   L +    R   R+     +      +    N  A    +I 
Sbjct: 179 ----RQLAKRQPAEAKRWLLQIAQFGRY--RF----DIDAVLSELQALPNLTARDRQQIA 228

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
             Y +R +Y  A          Y+ +   +E + R   +    +  + AR +   + +R+
Sbjct: 229 DAYWQRDDYATAA-------DLYARSPQTDETLYRQARSLDLSSQPEVARTLYQQLLQRF 281

Query: 258 PQGY 261
           PQ  
Sbjct: 282 PQSP 285



 Score = 40.1 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 27/86 (31%), Gaps = 15/86 (17%)

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
            A   +    Y  AA         Y  S   D   Y    S      D+       + + 
Sbjct: 227 IADAYWQRDDYATAAD-------LYARSPQTDETLYRQARSL-----DLSSQPEVARTLY 274

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVG 185
           Q   ++++R+  SP  + A  ++   
Sbjct: 275 Q---QLLQRFPQSPERERALVHLVRL 297


>gi|327404890|ref|YP_004345728.1| hypothetical protein Fluta_2911 [Fluviicola taffensis DSM 16823]
 gi|327320398|gb|AEA44890.1| Tetratricopeptide TPR_1 repeat-containing protein [Fluviicola
           taffensis DSM 16823]
          Length = 364

 Score = 40.5 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 29/86 (33%), Gaps = 3/86 (3%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
           +S +D       D    +  Y    L   +Q+++ A +YF +     P + +A       
Sbjct: 135 KSEKDYEESIRLDANNPKAYYNYGTLKFLQQDYNAAIKYFTKSIELDPSSPMAYN---DR 191

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPE 126
                    Y +A    E  + + P 
Sbjct: 192 GSCYRMQENYPKAIEDYEAALRKNPN 217


>gi|116749053|ref|YP_845740.1| FG-GAP repeat-containing protein [Syntrophobacter fumaroxidans
           MPOB]
 gi|116698117|gb|ABK17305.1| FG-GAP repeat protein [Syntrophobacter fumaroxidans MPOB]
          Length = 1133

 Score = 40.5 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 42/141 (29%), Gaps = 20/141 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA---GKYQQAASLGE 118
            + V  + + ++  A   F+  ++  P         +  A   ++    G    A S+  
Sbjct: 53  NRGVGLMGQFDYEAARREFSALAQQHPDND---DIQVNLAIATFNRQTKGDEDLALSILA 109

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
                 PE        Y  G+        +           +Y  +++           A
Sbjct: 110 GVFKHNPEHLR---ALYCTGL--------LELRVGRPAEAAEYFRKVIALDPRD---AEA 155

Query: 179 RFYVTVGRNQLAAKEVEIGRY 199
            +++     QL+  E  +G +
Sbjct: 156 AYFLGQCLMQLSRYEEALGWF 176


>gi|291549329|emb|CBL25591.1| hypothetical protein RTO_08900 [Ruminococcus torques L2-14]
          Length = 487

 Score = 40.5 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 11/76 (14%), Positives = 29/76 (38%), Gaps = 7/76 (9%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           Y   V  L+ +++ +A EY  +       +       +++   A      G  + A +  
Sbjct: 362 YAAGVDSLESEDYDQAIEYLTKVVKMDESYNDG----QAIYRLAQAYQGKGDTENAKTWY 417

Query: 118 EEYITQYPESKNVDYV 133
           ++ +  Y  S+ ++  
Sbjct: 418 QKMVDTYNNSRYIEDA 433


>gi|302892681|ref|XP_003045222.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256726147|gb|EEU39509.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 511

 Score = 40.5 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 13/102 (12%), Positives = 30/102 (29%), Gaps = 18/102 (17%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
            A+       F  A   F++            K L     +  + G++++A    +  I 
Sbjct: 12  AALARYDNNEFEDAINEFSKIGD-------TSKILFNMGVIHATLGEHEKAVESYQRAIR 64

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
                + +   Y+  G+S   +           +  L   + 
Sbjct: 65  L---DQYLAVAYFQQGVSNFLL--------GDFEEALANFND 95


>gi|255034468|ref|YP_003085089.1| Tetratricopeptide TPR_2 repeat-containing protein [Dyadobacter
           fermentans DSM 18053]
 gi|254947224|gb|ACT91924.1| Tetratricopeptide TPR_2 repeat protein [Dyadobacter fermentans DSM
           18053]
          Length = 330

 Score = 40.5 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 44/123 (35%), Gaps = 15/123 (12%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A+ +L   N   A +   +    +P   +   S    A V  +  +  +A +L ++ 
Sbjct: 217 YHLAMNYLSTHNEPLAIQELERILIMYP-NDLTTMS--DLAVVYLATDQAGRARALIDKC 273

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +   PE     Y        Y  +I  +    +  +   + +S +V +     Y   A+ 
Sbjct: 274 LKLNPEHPKAAY--------YNALIDHIE---KRFQESHRKLSNLVTQNPP-VYGAKAKQ 321

Query: 181 YVT 183
           Y+ 
Sbjct: 322 YLD 324


>gi|212635210|ref|YP_002311735.1| TPR domain-containing protein [Shewanella piezotolerans WP3]
 gi|212556694|gb|ACJ29148.1| TPR repeat protein [Shewanella piezotolerans WP3]
          Length = 578

 Score = 40.5 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 41/126 (32%), Gaps = 30/126 (23%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++   +LK+  +S+A + F Q     P++          A   Y A  ++ A      +I
Sbjct: 395 QQGQRYLKKGAYSQAAQKFTQ-----PYSK---------ASAFYMAEDFKSAYIY---FI 437

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                  +     +    + AQ        QR      Q   ++VE+Y      +     
Sbjct: 438 RV-----DSAEALFGAANALAQ--------QREYIAARQVYQQVVEKYPAFKPAQTNLSK 484

Query: 182 VTVGRN 187
           +    +
Sbjct: 485 IQKIID 490


>gi|4028023|gb|AAC96110.1| unknown [Desulfotomaculum thermocisternum]
          Length = 224

 Score = 40.5 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 36/112 (32%), Gaps = 15/112 (13%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           + RY R       ++L+ +   +A E   +     P      ++    A      G   +
Sbjct: 89  EPRYARGYANLGFVYLQMEKPDEAIEVLQKAIELNP---RIIQAWCNLANAYLQKGDLDR 145

Query: 113 AASLGEEYITQYP----ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           A     + +   P       N+ YVYYL G        D+       K  L+
Sbjct: 146 ALETNLKMLEIAPDFSLGHNNLAYVYYLKG--------DMNRAAEHLKQALE 189


>gi|159904280|ref|YP_001551624.1| Tfp pilus assembly protein PilF [Prochlorococcus marinus str. MIT
           9211]
 gi|159889456|gb|ABX09670.1| Tfp pilus assembly protein PilF [Prochlorococcus marinus str. MIT
           9211]
          Length = 270

 Score = 40.5 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 39/95 (41%), Gaps = 3/95 (3%)

Query: 35  LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94
           ++G   ++ +D  L    +      ++  A     + ++ +A E+F++ +   P   +AR
Sbjct: 119 VLGKWDEAVKDYELILAREPNNSLALFNLASAKGSQGDWLQAEEFFDKAANVQPGFVLAR 178

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
              +  A   Y    + QA S     I +YP   +
Sbjct: 179 ---ISKALANYQLKNFDQAESDLRAIIRKYPMFPD 210


>gi|126174973|ref|YP_001051122.1| TPR repeat-containing protein [Shewanella baltica OS155]
 gi|125998178|gb|ABN62253.1| Tetratricopeptide TPR_2 repeat protein [Shewanella baltica OS155]
          Length = 690

 Score = 40.5 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 45/163 (27%), Gaps = 36/163 (22%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
            A   F ++  C L+    Q +     + V     Q+     A+   + Q+++ A + F 
Sbjct: 324 VASVGFATLIGCLLLAAAPQPAHASVWEDVWKTTDQQ-----AMQAYQSQDYANAAKQFE 378

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
                                 QY AG Y+QA    E+         +     Y  G + 
Sbjct: 379 SPQWR--------------GSAQYKAGDYEQALKTFEQ--------DSSAQGLYNQGNAL 416

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
            Q+ +         K   Q        +        A   +  
Sbjct: 417 MQLGK-----PDKAKERYQAALEKQADFP----AAKANLELAE 450


>gi|332664870|ref|YP_004447658.1| hypothetical protein Halhy_2921 [Haliscomenobacter hydrossis DSM
           1100]
 gi|332333684|gb|AEE50785.1| hypothetical protein Halhy_2921 [Haliscomenobacter hydrossis DSM
           1100]
          Length = 183

 Score = 40.5 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 60/175 (34%), Gaps = 16/175 (9%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L+I    + C +      ++    L S T  + + ++ +     L     +   +Y    
Sbjct: 13  LSILLLFSACTVQEKGVSTATQAQLVS-TLGQLETQLRQAPEQDLDTAKVTTFVDYAQAL 71

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE----YITQYPESKNVDYVYYLVGM 139
           +  FP   +A   L  +A + Y+ G+   A  L  +    +   Y  S       ++ G 
Sbjct: 72  AERFPQDSLAPLYLFRAAELSYATGQVDAAIDLWGKIHSGFNK-YNRSPEAA---FMQGF 127

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
                      D +     + +    + +Y   P  K A+  +   +  ++ +E+
Sbjct: 128 V-------AENDLKDKDKAINFYQAFLTQYPEHPMAKDAQVLMDNLKKGISDREL 175


>gi|330443717|ref|NP_014496.2| Ctr9p [Saccharomyces cerevisiae S288c]
 gi|329138967|tpg|DAA10640.2| TPA: Ctr9p [Saccharomyces cerevisiae S288c]
          Length = 1077

 Score = 40.5 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 52/156 (33%), Gaps = 33/156 (21%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARK------------------------------SLL 98
            + ++ KA + + +  +  PF   A +                                L
Sbjct: 676 SKHSYLKAIQLYQKVLQVDPFNIFAAQGLAIIFAESKRLGPALEILRKVRDSLDNEDVQL 735

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI---RDVPYDQRAT 155
             A       +Y +A    E  + ++   K   ++  L+G ++       R V + Q+A 
Sbjct: 736 NLAHCYLEMREYGKAIENYELVLKKFDNEKTRPHILNLLGRAWYARAIKERSVNFYQKAL 795

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
           +     +   V+  + S ++   +F + +   Q+A 
Sbjct: 796 ENAKTALDLFVKESSKSKFIHSVKFNIALLHFQIAE 831


>gi|329764897|ref|ZP_08256488.1| TPR repeat-containing protein [Candidatus Nitrosoarchaeum limnia
           SFB1]
 gi|329138683|gb|EGG42928.1| TPR repeat-containing protein [Candidatus Nitrosoarchaeum limnia
           SFB1]
          Length = 372

 Score = 40.5 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 50/128 (39%), Gaps = 15/128 (11%)

Query: 44  RDVYLDSVTDVRYQ-REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
           +D    S+ D  Y  +++++K V  + ++    A   F Q  R  P      ++L+   +
Sbjct: 19  KDHEETSLVDPDYNRKKLFKKGVNLMADEKLEDAAVIFEQALRIEPDN---IETLMKLGY 75

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
           V++   +Y +A  + ++ +     +      + L  + + +        Q+     L  +
Sbjct: 76  VRFHLEEYGEALKIYDKILDIDVTNPE---AWNLKALVHYE--------QKNYSKALDAV 124

Query: 163 SRIVERYT 170
            + VE   
Sbjct: 125 EKAVESDP 132


>gi|328948719|ref|YP_004366056.1| hypothetical protein Tresu_1870 [Treponema succinifaciens DSM 2489]
 gi|328449043|gb|AEB14759.1| hypothetical protein Tresu_1870 [Treponema succinifaciens DSM 2489]
          Length = 299

 Score = 40.5 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 31/80 (38%), Gaps = 3/80 (3%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y++            A         ++P + +   +L   A   Y    Y+ A SL E  
Sbjct: 108 YQRGRALHSIGQNDSAVMALGSFCNEYPESKMYSSALYWIAECFYEDYDYETARSLYERI 167

Query: 121 ITQYPES---KNVDYVYYLV 137
           I +YP+S    + ++  YL+
Sbjct: 168 IYEYPDSAKCSDAEFKLYLI 187



 Score = 38.6 bits (89), Expect = 0.91,   Method: Composition-based stats.
 Identities = 25/217 (11%), Positives = 72/217 (33%), Gaps = 37/217 (17%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K  +  F  +       + ++SS               + + + ++  K++ ++ A  
Sbjct: 3   IKKRFVLAFLVLTFALPFAFSQKSSS---------GESAADSFVQGLICYKDKAWTDASV 53

Query: 79  YFNQCSRDFPFAGVAR--KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
           +  Q +    ++  +     ++   +       +  A +  + +I+ +PES  +  V Y 
Sbjct: 54  FLRQAADSEEYSTDSTWFMVIMSLVYS----EDFSSAVNACDYFISVFPESSLLPAVEYQ 109

Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
            G +   + ++           +  +      Y  S     A +++              
Sbjct: 110 RGRALHSIGQNDS--------AVMALGSFCNEYPESKMYSSALYWIAEC----------- 150

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
             +Y     Y  A   ++ ++  Y D+    +A  +L
Sbjct: 151 --FYEDYD-YETARSLYERIIYEYPDSAKCSDAEFKL 184



 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 39/119 (32%), Gaps = 8/119 (6%)

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
            ++FS A    +     FP + +            +S G+   A      +  +YPESK 
Sbjct: 80  SEDFSSAVNACDYFISVFPESSLLPAVEYQRGRALHSIGQNDSAVMALGSFCNEYPESKM 139

Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
                Y +   + +      YD    +       RI+  Y +S     A F + +    
Sbjct: 140 YSSALYWIAECFYE-----DYD---YETARSLYERIIYEYPDSAKCSDAEFKLYLITQH 190


>gi|258592799|emb|CBE69108.1| exported protein of unknown function [NC10 bacterium 'Dutch
           sediment']
          Length = 249

 Score = 40.5 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 74/234 (31%), Gaps = 39/234 (16%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           I   +  C L     + +      + T        Y   V  L   +  +A   F Q   
Sbjct: 5   IVIVLLGCVLAACATEQAAVKEEKADTH-------YNLGVARLASGDVKQAIAEFGQAIG 57

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
           D P   V R +            +  QA +  +  +   P+  +    Y  +G ++ Q  
Sbjct: 58  DAPDNSVYRNA---LGLAYLMDRRLDQAVASFQRAVQLDPKFSD---AYNNLGSAFVQQ- 110

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
               YDQ      +    +             A         + A   + +G  Y+ +G 
Sbjct: 111 --ADYDQ-----AVTAFRQ-------------ALLNPAYLSPEQA--HLNLGNVYMVQGR 148

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
              A+  F+  L    D     EA  RL  AY+    ++ A   ++L  ++ P+
Sbjct: 149 TADAVMEFKRALDILPD---FAEAHNRLGYAYLVQGQLELAIAELTLAVKQAPE 199


>gi|261403114|ref|YP_003247338.1| TPR repeat-containing protein [Methanocaldococcus vulcanius M7]
 gi|261370107|gb|ACX72856.1| TPR repeat-containing protein [Methanocaldococcus vulcanius M7]
          Length = 589

 Score = 40.5 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 64/224 (28%), Gaps = 44/224 (19%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           +K    L + +++ A   F +            ++L    +   +  K+ +A     EY+
Sbjct: 183 KKGRNLLLKNDYNNALIEFKKVLMRD---KYNIEALFGVGYCLNALNKFDEALGYWNEYL 239

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              P+  +    ++  G+S   +        +  K  +    +++E             Y
Sbjct: 240 RLNPKDASG---WFNKGVSLYNL--------KDYKNAIYCFKKVIELNPK-----DVDSY 283

Query: 182 VTVGRNQLAAKEVEIG---------------------RYYLKRGEYVAAIPRFQLVLANY 220
           + +    L  K+                           Y     Y  AI  ++  L   
Sbjct: 284 LFIINAYLYQKDYNGALEYVNEILKINPHWKFWKIKGDIYYSMKRYKDAIDSYKNALKYV 343

Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
            D    EE    +  AY  +     A        +  P+   A+
Sbjct: 344 KD----EEIYISIGNAYKNIGDFKNALTYYEYALKLNPKNIIAK 383


>gi|203287976|ref|YP_002222991.1| TPR domain protein [Borrelia recurrentis A1]
 gi|201085196|gb|ACH94770.1| TPR domain protein [Borrelia recurrentis A1]
          Length = 215

 Score = 40.5 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 10/67 (14%), Positives = 26/67 (38%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              +  +  +  A ++F +            K  +++A   Y   +Y +A    E  +  
Sbjct: 101 GEAYFFQGQYKNALKHFQKYIGLDANGARIAKVYILTADSFYKLERYNEADFAYENALRF 160

Query: 124 YPESKNV 130
           +P ++N+
Sbjct: 161 FPNNQNI 167


>gi|114591078|ref|XP_001160886.1| PREDICTED: prolyl 3-hydroxylase 2 isoform 7 [Pan troglodytes]
          Length = 709

 Score = 40.5 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 6/68 (8%)

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           F  Y  G+Y +A    + Y+  +P+ ++V     L  + Y + + D   D  A+    + 
Sbjct: 315 FAYYRVGEYVKALECAKAYLLCHPDDEDV-----LDNVDYYESLLDDSTDP-ASIEARED 368

Query: 162 MSRIVERY 169
           ++  V+R+
Sbjct: 369 LTMFVKRH 376


>gi|160880636|ref|YP_001559604.1| hypothetical protein Cphy_2504 [Clostridium phytofermentans ISDg]
 gi|160429302|gb|ABX42865.1| hypothetical protein Cphy_2504 [Clostridium phytofermentans ISDg]
          Length = 188

 Score = 40.5 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 27/76 (35%)

Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
            ++Y   L I   I +C           +    +       + +YE+A+ +  + NF+ 
Sbjct: 1  MKKIYVMLLGICMIIVLCSCSKQSTNQVEESTDFATPKKDKDQIIYEEALDYAYDGNFAS 60

Query: 76 AYEYFNQCSRDFPFAG 91
          A    N+    +  + 
Sbjct: 61 AVSKLNEFVEPYEDSE 76


>gi|163942289|ref|YP_001647173.1| hypothetical protein BcerKBAB4_4386 [Bacillus weihenstephanensis
           KBAB4]
 gi|163864486|gb|ABY45545.1| hypothetical protein BcerKBAB4_4386 [Bacillus weihenstephanensis
           KBAB4]
          Length = 404

 Score = 40.5 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 32/75 (42%), Gaps = 1/75 (1%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+Y+      K+ N+ KA   FN   +    + +A  +L  +   +     Y +   L +
Sbjct: 279 ELYKDGRSLYKQGNYEKAITVFNNVRKLLSDSDIADDALYFTILSKMEIKDYTEIEKLYD 338

Query: 119 EYITQYPES-KNVDY 132
           E++     + K+ DY
Sbjct: 339 EFLNNSSSNFKDSDY 353


>gi|186686313|ref|YP_001869509.1| hypothetical protein Npun_R6287 [Nostoc punctiforme PCC 73102]
 gi|186468765|gb|ACC84566.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC
           73102]
          Length = 180

 Score = 40.5 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 27/79 (34%), Gaps = 6/79 (7%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYS 106
           S   +   +  Y+   +  +   + +A E   +          +    +  +       +
Sbjct: 2   SAESLEIAKTFYQTGKIAFENGRYREAVENLEKASALLARN--SRFGGEVEICLVTAYEA 59

Query: 107 AGKYQQAASLGEEYITQYP 125
           AG+   A +L E  + ++P
Sbjct: 60  AGRTDDAIALCER-LKRHP 77


>gi|326433829|gb|EGD79399.1| tetratricopeptide repeat domain-containing protein [Salpingoeca sp.
           ATCC 50818]
          Length = 903

 Score = 40.5 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 56/171 (32%), Gaps = 34/171 (19%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAAS----LGEEYITQYPESKNVDYV--YYLVGMSYAQMIR 146
           A +  L +A+  +   +Y QA        E ++   P   + D    Y  +G  Y +   
Sbjct: 666 ASQGRLGAAYASHK--EYDQAIQHLTQALEAFLDA-PGDSDADIAGTYGCLGDVYFK-TG 721

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGE 205
           D     ++ K  L      +  +                   L  K + I G+ Y+K GE
Sbjct: 722 DYVRAIKSCKEALNIYELKLGAHP------------------LTDKTLLILGQAYMKTGE 763

Query: 206 YVAAIPRFQLVLANYSDA-----EHAEEAMARLVEAYVALALMDEAREVVS 251
           YV+AI  F   L    D               L  AY      D AR  +S
Sbjct: 764 YVSAIKYFNKRLQILPDTHGDNHPDTASVFHNLGSAYFKTGEYDSARHFLS 814



 Score = 35.5 bits (81), Expect = 7.5,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 66/234 (28%), Gaps = 54/234 (23%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSR--------DFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           A  ++ +  + +A E   +  +        D P                Y   KY +A  
Sbjct: 337 ARAYVNKGKYDRAIELLQEVLKIKESTFGHDHPSTANTYHG---LGKAWYHQSKYDEAIK 393

Query: 116 LGE-EYI----TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM-SRIVERY 169
             E  +     T   E  +    Y+ +G+++     D        +  L      + E +
Sbjct: 394 NFETAFEIQRRTLGEEHTDTATTYHSLGLAHHDK-GDCDTADSYYQKALSIRVRELGENH 452

Query: 170 TN--SPY------------VKGARFYVTVGRNQLAAK-----------EVEIGRYYLKRG 204
            +  S Y               A  Y     N  A K           E  +G  Y  +G
Sbjct: 453 PDTASTYNNLGQMYNSRGNYVQAEKYFKKSLNIKADKLSDDHADTAATEHNLGHLYDNKG 512

Query: 205 EYVAAIPRFQLVLA--------NYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
           E+  AI  ++  L         ++ D          L   Y  +   + A + +
Sbjct: 513 EHDRAIKHYKKALEVRIKKLGPDHPDTACTY---HNLGLVYFKIGDDENALKQL 563


>gi|258404983|ref|YP_003197725.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfohalobium
           retbaense DSM 5692]
 gi|257797210|gb|ACV68147.1| Tetratricopeptide TPR_2 repeat protein [Desulfohalobium retbaense
           DSM 5692]
          Length = 563

 Score = 40.5 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 45/273 (16%), Positives = 87/273 (31%), Gaps = 64/273 (23%)

Query: 11  IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLK 69
           +     +QL   A T F  +    L+      +    L    +   Q  +Y E A  + +
Sbjct: 27  LTPPAQWQLSPAARTDFLFLKAQALLAEGNAPAAAQALSRALEEDPQPTLYLELAETYWR 86

Query: 70  EQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGK-YQQAASLGEEYITQYPE 126
            +   KA     + +  FP  FA VA  + +      Y AG+  + AA+    YI  +P+
Sbjct: 87  NEERQKAKTILKEATERFPDQFAFVANLAQI------YMAGQRPKAAAATLRSYIQDHPD 140

Query: 127 S---------------KNVDYVYYLVGMSYAQMIRDVPYDQRA-------------TKLM 158
           +                  D       +   Q I +   +                 +  
Sbjct: 141 NWTARAKLGEIQVRIQAFAD------AVDTLQTIPEPEREPEHLFFLGQAQAGLGLLQKA 194

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
              +   V++      +  A   +   R               ++ +Y AAI  +  +  
Sbjct: 195 SDNLQSAVDKAPQ---MAKAWAELGYIRE--------------RQKDYPAAITAYTRLSE 237

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
              D    +E + RL+E ++ L   D+A+ +  
Sbjct: 238 LQPD---NQEVLIRLIELHLELNNPDKAQTLAE 267



 Score = 35.1 bits (80), Expect = 9.9,   Method: Composition-based stats.
 Identities = 25/223 (11%), Positives = 65/223 (29%), Gaps = 19/223 (8%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           D         R    ++             KA +         P      K+     +++
Sbjct: 163 DTLQTIPEPEREPEHLFFLGQAQAGLGLLQKASDNLQSAVDKAPQ---MAKAWAELGYIR 219

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM-IRDVPYDQRATKL---MLQ 160
                Y  A +         P+++ V     L+ +    + + +    Q   +       
Sbjct: 220 ERQKDYPAAITAYTRLSELQPDNQEV-----LIRLIELHLELNNPDKAQTLAESGPGTES 274

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGR---NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
           +  R V+ +  + +   AR  +   R   +      +    Y+ ++    A   R    L
Sbjct: 275 FRLRCVDVFLQNGFYTPARAMLDTIRESADFSPKTYLYEALYWYQKERNPA---RAIEAL 331

Query: 218 ANYSDA-EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
                +     +++  L + ++     ++A +V    +  +P 
Sbjct: 332 RQIPASAPFYNQSLHFLGQMHLERDQPEQAVQVARKGKATFPD 374


>gi|298530866|ref|ZP_07018268.1| TPR repeat-containing protein [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298510240|gb|EFI34144.1| TPR repeat-containing protein [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 644

 Score = 40.5 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 68/221 (30%), Gaps = 40/221 (18%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           D+  DS +       ++ +A    + ++ ++     +              +L+  A   
Sbjct: 101 DISPDSPSIHVRLAAIFGRAKNLHQARDHARRASELD---------PHNWDALMKLARAH 151

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           +   + Q+A  L ++ +T  PE                  +  V  +    +   +++ R
Sbjct: 152 HELEEPQKAKRLYQKVLTMNPEHPPA-----------YSSLGSVCRELNNPEEAREHLQR 200

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
            +E   +S         +      L   E         R  Y+    R   +        
Sbjct: 201 ALELEPDSALH---HTRMGSVCKDLKLYEEA-------RDHYL----RALEI------DP 240

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
           H E A +RL  AY  L  + +A +      E  P    A Y
Sbjct: 241 HFEHAHSRLGNAYKHLGQISDALKSYRRALELDPDSVQAHY 281


>gi|183222246|ref|YP_001840242.1| TPR repeat-containing signal peptide [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
 gi|189912298|ref|YP_001963853.1| TPR repeat-containing lipoprotein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167776974|gb|ABZ95275.1| TPR-repeat-containing lipoprotein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167780668|gb|ABZ98966.1| TPR-repeat-containing protein; putative signal peptide [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 1197

 Score = 40.5 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 31/264 (11%), Positives = 77/264 (29%), Gaps = 56/264 (21%)

Query: 19  LYKFALTIFFSIA--VCFLVGWERQSSRDVYLDSVT-----DVRYQREVYEKAVLFLKEQ 71
           + K  +     ++   C    ++  + +D  ++         +   R +        ++ 
Sbjct: 1   MKKNIILCVLLLSFIGCRSRDFQAVTVKDSVVEKSAASDRQKIEEARALIADGSNEFQKG 60

Query: 72  NFS-------KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
           N          + + F            A     +     Y  G Y+ A    E+     
Sbjct: 61  NMDVSLEKAKSSIQTFELVEG------YA-----LLGASHYQLGDYENAKIAYEKGNNLD 109

Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT-NSPYVKGARFYVT 183
           P+++ +     L+G+   Q            +  L     + +     S Y         
Sbjct: 110 PQNEKI-----LIGLGTVQSTLGEN------EAALSTYQTLNKLKPEESIYTYKTG---I 155

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
           + +N                G Y  ++   +  L +  D  +  E + +L +  + L   
Sbjct: 156 LLKNL---------------GRYQESLVTLKS-LEDKQDFPYPVELLNQLGDVCLELKKY 199

Query: 244 DEAREVVSLIQERYPQGYWARYVE 267
           +EA    +  ++  P+   A+  +
Sbjct: 200 EEAESYFAKAEKLNPELKSAKDAK 223



 Score = 38.9 bits (90), Expect = 0.82,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 60/191 (31%), Gaps = 42/191 (21%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEE 119
           ++       + + +A   + +     P      K+ L    A      G+ ++  S+ E 
Sbjct: 610 KEGNALFNRKKYIEAVTPYQKAYDRVP------KASLLVKIAECYIEKGEEEKGLSILEN 663

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +    E+           +S+ + I    Y +   K        I++   +S Y     
Sbjct: 664 AVKSNKEN----------AISFKEGIYSFYYKKGELKRAEDGFYDILKEKPDSYYA---- 709

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA--EHAEEAMARLVEAY 237
           +Y+                  +KR  Y AAI  F   +    +    +  + +     AY
Sbjct: 710 YYMLGLVT-------------MKRKNYEAAIGEFDKAILVNPNFAPSNVAKGL-----AY 751

Query: 238 VALALMDEARE 248
             L  MD A+ 
Sbjct: 752 YKLNQMDAAKR 762



 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 18/143 (12%), Positives = 47/143 (32%), Gaps = 18/143 (12%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSL 97
              + R+     V D  +    Y  A+ +  E   ++A        +  P F        
Sbjct: 757 MDAAKREFEKARVKDSEFGLSSYNLAIAYFNEDLTNEAKSILESIRKSDPDF----MDGE 812

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
           +  A++ +   K ++A    +  + + P ++ + +  +         I D    Q  ++ 
Sbjct: 813 IQLAYIYFKENKLEEAEKTIDRVLKEEPSAEAL-FAQF--------KILDAKLKQSPSEK 863

Query: 158 MLQYMSRI----VERYTNSPYVK 176
                + +    +  Y  + Y +
Sbjct: 864 TKSKRNTVKEKILREYGETKYAR 886


>gi|157827613|ref|YP_001496677.1| hypothetical protein A1I_06620 [Rickettsia bellii OSU 85-389]
 gi|157802917|gb|ABV79640.1| hypothetical protein A1I_06620 [Rickettsia bellii OSU 85-389]
          Length = 250

 Score = 40.5 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 17/143 (11%), Positives = 43/143 (30%), Gaps = 15/143 (10%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
               +   DV   ++ Y+ A+   K+     A   F    + +P + +   +        
Sbjct: 107 KTAPEPNKDVAPDKQAYDLALASYKDNKTDDAKNKFKNFIQKYPKSSMISNAYFWYGECF 166

Query: 105 YSAGKYQQAASLGEEYITQY---PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           +    Y  AA     Y+  Y   P+          + +S  ++        + T      
Sbjct: 167 FKQKDYNTAAVN---YLKGYKESPKGAKSSDALLKLALSLGEL--------KKTTEACNI 215

Query: 162 MSRIVERYTNSPYVKGARFYVTV 184
           + ++ + +  +     A   +  
Sbjct: 216 LDKLNKEFPGNNRTA-ASKKMAE 237



 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 44/131 (33%), Gaps = 30/131 (22%)

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
           Y + ++  +  +        T          +++Y  S  +  A F+             
Sbjct: 123 YDLALASYKDNK--------TDDAKNKFKNFIQKYPKSSMISNAYFWYGEC--------- 165

Query: 195 EIGRYYLKRGEY-VAAIPRFQLVLANYSDAE---HAEEAMARLVEAYVALALMDEAREVV 250
                + K+ +Y  AA+      L  Y ++     + +A+ +L  +   L    EA  ++
Sbjct: 166 -----FFKQKDYNTAAVNY----LKGYKESPKGAKSSDALLKLALSLGELKKTTEACNIL 216

Query: 251 SLIQERYPQGY 261
             + + +P   
Sbjct: 217 DKLNKEFPGNN 227


>gi|116623140|ref|YP_825296.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116226302|gb|ABJ85011.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 311

 Score = 40.5 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 33/86 (38%), Gaps = 9/86 (10%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQY 105
           L    D   + ++    + + +   F  A ++  +  +  P  F+       L  A +  
Sbjct: 222 LTRPGDALAESQL---GMTYFELGQFDNAVKHLERARKLDPAHFSH----PQLYLAEIHL 274

Query: 106 SAGKYQQAASLGEEYITQYPESKNVD 131
             G+   AA + E+++  +P+    D
Sbjct: 275 RRGEKAAAADVLEDFLLHHPDYPQAD 300


>gi|330836583|ref|YP_004411224.1| Tetratricopeptide TPR_2 repeat-containing protein [Spirochaeta
           coccoides DSM 17374]
 gi|329748486|gb|AEC01842.1| Tetratricopeptide TPR_2 repeat-containing protein [Spirochaeta
           coccoides DSM 17374]
          Length = 229

 Score = 40.5 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)

Query: 208 AAIPRFQLVLANY-SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
           AA+ ++Q+V  +Y  D   A  A+      Y     +D AR V   + + YP   +AR  
Sbjct: 163 AALGQYQMVADSYGQDIAVAPRALFGEARIYEKTGDIDLARAVFQELADAYPSSEFARIA 222

Query: 267 ET 268
           + 
Sbjct: 223 QN 224


>gi|255639673|gb|ACU20130.1| unknown [Glycine max]
          Length = 357

 Score = 40.5 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 23/77 (29%), Gaps = 11/77 (14%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           KA    ++ N+  AY+   Q     P      A ++ +             +A S   + 
Sbjct: 8   KAKEAFEDDNYDLAYDLLTQAIGLSPNNADLYADRAQVNI-----KVNNLTEAVSDANKA 62

Query: 121 ITQYPESKNVDYVYYLV 137
           I   P         YL 
Sbjct: 63  IELNPSHSKA----YLR 75


>gi|15606922|ref|NP_214303.1| hypothetical protein aq_1896 [Aquifex aeolicus VF5]
 gi|2984175|gb|AAC07708.1| hypothetical protein aq_1896 [Aquifex aeolicus VF5]
          Length = 342

 Score = 40.5 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 66/198 (33%), Gaps = 43/198 (21%)

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
           F +  +         K         ++A  Y +A +   + +   P+   +       G+
Sbjct: 17  FPKVEQRH------WKVYYDLGTAAFAARNYSEAIANFHKALRANPDEPRIWNAL---GL 67

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE-----V 194
           +Y +         +  K   +   + +    N      AR  + +   +L   E     +
Sbjct: 68  AYMEA--------KEYKKAEESFKKALSINPN---YSEARKNLGILYYKLGRYEEALKYL 116

Query: 195 EIG---RYYLKRGE---YVAAIPRFQLVLANYSDAEHAEEAMAR----------LVEAYV 238
           +      YY K+ E   Y+A +   +  L NY    + E+A+A           L +AY 
Sbjct: 117 QEAANDEYYEKKHEAFYYLAKVYEAKQDLKNY--VRYLEKAVAYNPNFVQAQLELAQAYE 174

Query: 239 ALALMDEAREVVSLIQER 256
            L   +EA ++   +   
Sbjct: 175 NLGKYEEAEKIYKSLLLN 192


>gi|323499300|ref|ZP_08104277.1| TPR domain protein in aerotolerance operon [Vibrio sinaloensis DSM
           21326]
 gi|323315688|gb|EGA68722.1| TPR domain protein in aerotolerance operon [Vibrio sinaloensis DSM
           21326]
          Length = 587

 Score = 40.5 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 12/84 (14%), Positives = 27/84 (32%), Gaps = 15/84 (17%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCS----RDFPFAGV-----ARKS------LLMSAFVQYS 106
           ++A       ++ +A E F          +            ++          A     
Sbjct: 349 QQAKQLFDAGDYQQAAELFEDPDWKGIAQYKAGDYKGAVQTLQAAEGVEGKYNYANALAQ 408

Query: 107 AGKYQQAASLGEEYITQYPESKNV 130
           +G+ ++A  L E+ +   PE K+ 
Sbjct: 409 SGELEKAVQLYEQILQTAPEHKDA 432


>gi|228473246|ref|ZP_04058001.1| aerotolerance-related protein BatE [Capnocytophaga gingivalis ATCC
           33624]
 gi|228275396|gb|EEK14188.1| aerotolerance-related protein BatE [Capnocytophaga gingivalis ATCC
           33624]
          Length = 254

 Score = 40.5 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 9/76 (11%), Positives = 24/76 (31%), Gaps = 3/76 (3%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           +   E++ +A       ++ +A + + +          +       A   Y       + 
Sbjct: 23  QSNAELFAQAGSAYNRGDWQEAIDNYRRILSK---GEASASLYYNLANAYYKTEDVAHSI 79

Query: 115 SLGEEYITQYPESKNV 130
              E+ +   PE K +
Sbjct: 80  YYYEKALELSPEDKAI 95


>gi|114591088|ref|XP_001160575.1| PREDICTED: leprecan-like 1 isoform 2 [Pan troglodytes]
          Length = 689

 Score = 40.5 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 6/68 (8%)

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           F  Y  G+Y +A    + Y+  +P+ ++V     L  + Y + + D   D  A+    + 
Sbjct: 315 FAYYRVGEYVKALECAKAYLLCHPDDEDV-----LDNVDYYESLLDDSTDP-ASIEARED 368

Query: 162 MSRIVERY 169
           ++  V+R+
Sbjct: 369 LTMFVKRH 376


>gi|88703968|ref|ZP_01101683.1| TPR domain protein [Congregibacter litoralis KT71]
 gi|88701795|gb|EAQ98899.1| TPR domain protein [Congregibacter litoralis KT71]
          Length = 923

 Score = 40.5 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 24/69 (34%), Gaps = 3/69 (4%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           +A L   E N+  A + FNQ       +     +LL++        K   A    E ++ 
Sbjct: 273 RAQLLFDEGNYEGAIDLFNQILSV---SPDNPGALLLAGNANARINKLPIARRHLERFLE 329

Query: 123 QYPESKNVD 131
             P S    
Sbjct: 330 LQPGSTQAA 338


>gi|195455330|ref|XP_002074672.1| GK23037 [Drosophila willistoni]
 gi|194170757|gb|EDW85658.1| GK23037 [Drosophila willistoni]
          Length = 482

 Score = 40.5 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 19/163 (11%), Positives = 52/163 (31%), Gaps = 22/163 (13%)

Query: 30  IAVCFLVGWERQSSRDVYLDSVTDV-RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
           I+            +D+ +D V    +   ++ ++   ++K+ ++  A E + +    +P
Sbjct: 72  ISPSGSAAGTPTEKQDLPVDLVAQQHKKANDIKDRGNTYVKKGDYDHAIEAYTEAVDVYP 131

Query: 89  FAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
           +     + ++L            Y       E  I      K     YY    +   +  
Sbjct: 132 YDPIYFSNRAL-----CYLKKEDYNSCVEDCEAAIRL---DKLCAKAYYRRMQANESLGN 183

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
           ++          L+  + ++     +   K +   +    N+L
Sbjct: 184 NM--------EALKDCTSVLAIEPKNVEAKTSLARI---NNRL 215


>gi|162451084|ref|YP_001613451.1| hypothetical protein sce2812 [Sorangium cellulosum 'So ce 56']
 gi|161161666|emb|CAN92971.1| hypothetical protein sce2812 [Sorangium cellulosum 'So ce 56']
          Length = 557

 Score = 40.5 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 50/156 (32%), Gaps = 25/156 (16%)

Query: 43  SRDVYLDSVTDVRYQREVYE--KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
            RD    S  +V  +  ++   +    L++     A     +     P      K   + 
Sbjct: 3   ERDDPRPSTREVAAEEFLFHLHRGSELLQDNRVHAAKAELERALSLQPSDP---KGQDLL 59

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPES--KNVDYVY-YLVGMSYAQMIRDVPYDQRATKL 157
             V +  G Y +A ++ E  I  +PE+    ++    YL                  T  
Sbjct: 60  GIVYFRLGLYPRAIAIYERLIQAHPEAVEPRINLALSYLK-----------------TGQ 102

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
             Q  S + +    +P  + A  Y+ +   ++   E
Sbjct: 103 PAQARSELEKALEQNPKHQRAWGYLGLAFQRMGDYE 138


>gi|172062965|ref|YP_001810616.1| TPR repeat-containing protein [Burkholderia ambifaria MC40-6]
 gi|171995482|gb|ACB66400.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria
           MC40-6]
          Length = 285

 Score = 40.5 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 33/100 (33%), Gaps = 4/100 (4%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
                 + F+  +  L G      +     S      Q E+   A   L   N   A   
Sbjct: 3   RSVIRALAFAAVLPVLAGGCAPGIQTRPALSQKSDDPQAEL-RIADSALAGGNVELASTL 61

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           + +     P + +A  + L    V Y AG  ++A  L E+
Sbjct: 62  YGKVLARHPDS-LA--AQLGLGDVNYRAGDLERARILYEQ 98


>gi|90577283|ref|ZP_01233094.1| hypothetical protein VAS14_09569 [Vibrio angustum S14]
 gi|90440369|gb|EAS65549.1| hypothetical protein VAS14_09569 [Vibrio angustum S14]
          Length = 674

 Score = 40.5 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 17/128 (13%), Positives = 40/128 (31%), Gaps = 33/128 (25%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++A     +  + +A + F            + +        +Y A  Y QA    +   
Sbjct: 345 QQAYQTYTDGKYKQAAQDFE-----------SPQWK---GIAEYKAKDYAQAIETLK--- 387

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              P   ++    Y +G +YAQ            +  +    ++ +   N P     +  
Sbjct: 388 ---PLHDSMS--QYNLGNAYAQS--------GKLQQAVDTYEKLQKADPNYP---DVKKN 431

Query: 182 VTVGRNQL 189
           + + +  L
Sbjct: 432 LDIVKKAL 439


>gi|16082148|ref|NP_394586.1| hypothetical protein Ta1127 [Thermoplasma acidophilum DSM 1728]
 gi|10640440|emb|CAC12254.1| conserved hypothetical protein [Thermoplasma acidophilum]
          Length = 529

 Score = 40.5 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 31/241 (12%), Positives = 72/241 (29%), Gaps = 60/241 (24%)

Query: 63  KAVLFLKEQNFSKAYEYF---NQCSRDFP---------FAGV------------ARKSLL 98
           KA    ++ ++  A +         ++ P         +  +            A K+  
Sbjct: 66  KADALYRKGDYEDALDVLNFAETIEKNNPELLSLKSICYGSLGKFNESKIEATKAIKADP 125

Query: 99  MSAFVQYS-------AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
              F  Y+         +Y  A    ++Y+   P   +               + D+ Y 
Sbjct: 126 NYPFAYYNRAKAEQYLEEYDIAKKDLQKYLEMQPNDPDA-----------YMDLADMEYH 174

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK--EVEIG-----RY-YLKR 203
           +   K  LQ+++  +++   S      +  + + +  +     E+         + Y+  
Sbjct: 175 EGDYKKALQHVNTAIKKDKESTDAHDLKLNILLAQKDIENYLKELLEAFKDTEDFKYIGT 234

Query: 204 --------GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
                   G +  A    +  +  Y D     +A+AR+   Y      D  R    L++ 
Sbjct: 235 LVETLKSVGSFDTAEDILKEFIKIYKDEPFLYDALARVY--YDQDRKDDAYRTYEELLKS 292

Query: 256 R 256
            
Sbjct: 293 N 293


>gi|148254947|ref|YP_001239532.1| SPINDLY family O-linked N-acetylglucosamine transferase
           [Bradyrhizobium sp. BTAi1]
 gi|146407120|gb|ABQ35626.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
           [Bradyrhizobium sp. BTAi1]
          Length = 742

 Score = 40.5 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 13/109 (11%), Positives = 29/109 (26%), Gaps = 16/109 (14%)

Query: 64  AVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
            V       F +A          D      + ++        +  G+Y++A +  E  I 
Sbjct: 64  GVSERDSGRFDEAVLVLTRAIESD----PRSAEAQSDLGLALFRLGRYEEARARYERAIA 119

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
             P           +G +   + R         +  +    R +    +
Sbjct: 120 LRPNFPA---ALTHLGNTLMNLFR--------FEEAISAHDRAIALKPD 157


>gi|67921673|ref|ZP_00515191.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
 gi|67856785|gb|EAM52026.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
          Length = 226

 Score = 40.5 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 27/234 (11%), Positives = 71/234 (30%), Gaps = 39/234 (16%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
             ++      +  ++ +  +      S+ DV      D++    +Y++A+  +K+ +   
Sbjct: 1   MKKIKSIMSRLSLAVILISMTACAVPSTSDVAEG---DIKKSEVLYQQALEKVKKGDLKA 57

Query: 76  AYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
           A E +      +         +        +   + ++A     + I        +   Y
Sbjct: 58  ALEDYNQAIEAN----PQNSDAYSNRGNAYFLLKQPEEAMKNYNQAIKL---DPELSRPY 110

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
           Y  G  Y +        +   +L ++  ++ +    +  Y+  A     V  + L   + 
Sbjct: 111 YNRGFLYQR--------EGKPELAVKDYNKTISLNPD--YIP-AYLNRAVVLSILGDNQ- 158

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
                         AI  +  V+    +             +Y  L   ++A E
Sbjct: 159 -------------GAIEDYNKVIETDPNLPQLY---FNRAASYSELGNPEKAME 196


>gi|115377579|ref|ZP_01464777.1| TPR repeat, putative [Stigmatella aurantiaca DW4/3-1]
 gi|115365427|gb|EAU64464.1| TPR repeat, putative [Stigmatella aurantiaca DW4/3-1]
          Length = 543

 Score = 40.5 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 39/112 (34%), Gaps = 18/112 (16%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            K ++ L+     +A ++F +  R   F     ++     F+    G Y +A    +  +
Sbjct: 260 NKGLISLQAGKKEEAKKHFIKALR---FNQEQAQAYQNLGFIYLEEGAYGKAHDNFQRAL 316

Query: 122 TQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
              P     DY    Y +G++  +M +         +   +    I+    N
Sbjct: 317 KVNP-----DYLEARYNLGLTLMKMEKG--------EEAKKEFRTILAVNPN 355


>gi|42742275|gb|AAS45240.1| cartilage associated protein [Gallus gallus]
          Length = 393

 Score = 40.5 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 26/72 (36%), Gaps = 13/72 (18%)

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           E   +  R  P+    +       F  + A    +A +    ++ ++P+ + +       
Sbjct: 127 ELLEEFQRREPY-KYLQ-------FAYFKANNLPKAIAAAHTFLLKHPDDEMM-----QR 173

Query: 138 GMSYAQMIRDVP 149
            M+Y + I D  
Sbjct: 174 NMAYYKSIPDAD 185


>gi|1732237|gb|AAB38704.1| CTR9 [Saccharomyces cerevisiae]
          Length = 1077

 Score = 40.5 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 52/156 (33%), Gaps = 33/156 (21%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARK------------------------------SLL 98
            + ++ KA + + +  +  PF   A +                                L
Sbjct: 676 SKHSYLKAIQLYQKVLQVDPFNIFAAQGLAIIFAESKRLGPALEILRKVRDSLDNEDVQL 735

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI---RDVPYDQRAT 155
             A       +Y +A    E  + ++   K   ++  L+G ++       R V + Q+A 
Sbjct: 736 NLAHCYLEMREYGKAIENYELVLKKFDNEKTRPHILNLLGRAWYARAIKERSVNFYQKAL 795

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
           +     +   V+  + S ++   +F + +   Q+A 
Sbjct: 796 ENAKTALDLFVKESSKSKFIHSVKFNIALLHFQIAE 831


>gi|83816032|ref|YP_445721.1| TPR repeat-containing protein [Salinibacter ruber DSM 13855]
 gi|83757426|gb|ABC45539.1| Tetratricopeptide repeat family [Salinibacter ruber DSM 13855]
          Length = 665

 Score = 40.5 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 34/262 (12%), Positives = 77/262 (29%), Gaps = 38/262 (14%)

Query: 21  KFALTIFFSIAVCFLVGWE---RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           + A  +   +    L+G       S   ++  + T     R +  +     +  ++ +A 
Sbjct: 85  RLAPPLGAVLLCTLLMGGPPPTVASPAVLFPSADTTSPRARRLLIQGTTEAQLGDYEEAI 144

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
            +F       P    A   LL  A    + G    A        TQ   S          
Sbjct: 145 SHFEAALEQVP---EAPVLLLALADAHEAQGALSTALFYARRAQTQ--GSPRP------- 192

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV----GRNQLAAKE 193
             S  + + ++          L+   ++++   N+     AR  +       +  + + E
Sbjct: 193 --SPYRRLAEMQRAAGDPAAALRTYQQLLDHVPNANDAHRARAAIQADLGRTKGAIQSYE 250

Query: 194 VEIGR--------------YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           + + R               Y K G+        + ++         +    RL E Y  
Sbjct: 251 IYLQRADSPPIDVYRRLLSLYRKTGDKDGVETTLRTLVERRPTVRSYQR---RLGEYYAD 307

Query: 240 LALMDEAREVVSLIQERYPQGY 261
                +A  +++ +  ++P   
Sbjct: 308 EGRPRKALALLAPLGRQFPNDE 329


>gi|55725300|emb|CAH89515.1| hypothetical protein [Pongo abelii]
          Length = 475

 Score = 40.5 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 35/294 (11%), Positives = 86/294 (29%), Gaps = 56/294 (19%)

Query: 2   SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60
                +A+ I +    +  +       +++  + +G +  Q+S    +   +D      +
Sbjct: 183 QKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 242

Query: 61  YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
             K        ++ KA E++      D   +     +L           +  +A      
Sbjct: 243 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 295

Query: 120 YITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKL--------- 157
           ++  +   +N   V Y +   Y              Q++  +P D +             
Sbjct: 296 FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREG 355

Query: 158 ----MLQYMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEI 196
                 QY       +               ++ + + A  Y     + +      ++ +
Sbjct: 356 DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMV 415

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
              + + G Y  A+  ++     + +     E +  LV     L L D A+E  
Sbjct: 416 ASCFRRSGNYQKALDTYKDTRRKFPE---NVECLRFLVRLCTDLGLKD-AQEYA 465


>gi|326920762|ref|XP_003206637.1| PREDICTED: hypothetical protein LOC100538424, partial [Meleagris
           gallopavo]
          Length = 1036

 Score = 40.5 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 66/201 (32%), Gaps = 41/201 (20%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV- 130
           N SKA E  ++ +   P         ++   +Q  A K + A    ++ I     S+ + 
Sbjct: 497 NHSKAIECLHEAATTQPE----PSVFVLLGKIQMKAEKTEDAVGSFKQAINLLMTSEKIL 552

Query: 131 ------DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY---------- 174
                   +YYL+G+ Y + I  +               R+   Y ++ Y          
Sbjct: 553 PPTFEAAEMYYLMGLCYMEQINLLE-----ACDAFSMAIRLHSSYPDAFYQRGLCRMQLR 607

Query: 175 ----VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
               ++     + +  +   A  +    YY  +G Y  AI      +  + ++       
Sbjct: 608 QTKCIQDFNHTLELCPSHFQAY-MGRAAYYGSKGRYSKAIMNCNEAIKIHPNS------- 659

Query: 231 ARLVEAYVALALMDEAREVVS 251
              V+AY    ++    + + 
Sbjct: 660 ---VKAYFYRGILKYQNKALK 677



 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 13/110 (11%), Positives = 35/110 (31%), Gaps = 13/110 (11%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            + +L+++  +++ A E   +     P      ++        Y   +++ A     + +
Sbjct: 698 NRGLLYMELGDYANACEDLKEAVLLSPGDSQIFQA---IGTCHYRLNEFEDAVRSFNQVL 754

Query: 122 TQYPESKNVDYVYYL-VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
              P S       Y+  G SY +   +        K   +   + +    
Sbjct: 755 RLEPVSVEA----YIGRGNSYMKKGHEADL-----KQAQKDFLKAIHLNP 795


>gi|296211098|ref|XP_002752266.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP4 [Callithrix
           jacchus]
          Length = 459

 Score = 40.5 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 44/144 (30%), Gaps = 26/144 (18%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRD-----FPFAGVARKSL-------LMSAFVQYSAGK 109
           E+  ++ KE  + +A   + +            +  A+K+        L  A        
Sbjct: 275 ERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSSEEAQKAQALRLASHLNLAMCHLKLQA 334

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           +  A     + +     ++      +  G ++   + D                ++++ Y
Sbjct: 335 FSAAIGSCNKALELDSNNEKG---LFRRGEAHL-AVNDFDL-------ARADFQKVLQLY 383

Query: 170 TNSPYVKGARFYV--TVGRNQLAA 191
            N+     A+  +     R QLA 
Sbjct: 384 PNNK-AAKAQLAMCQQRIRRQLAR 406


>gi|2565014|gb|AAB81882.1| Cdp1p [Saccharomyces cerevisiae]
          Length = 1077

 Score = 40.5 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 52/156 (33%), Gaps = 33/156 (21%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARK------------------------------SLL 98
            + ++ KA + + +  +  PF   A +                                L
Sbjct: 676 SKHSYLKAIQLYQKVLQVDPFNIFAAQGLAIIFAESKRLGPALEILRKVRDSLDNEDVQL 735

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI---RDVPYDQRAT 155
             A       +Y +A    E  + ++   K   ++  L+G ++       R V + Q+A 
Sbjct: 736 NLAHCYLEMREYGKAIENYELVLKKFDNEKTRPHILNLLGRAWYARAIKERSVNFYQKAL 795

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
           +     +   V+  + S ++   +F + +   Q+A 
Sbjct: 796 ENAKTALDLFVKESSKSKFIHSVKFNIALLHFQIAE 831


>gi|330823109|ref|YP_004386412.1| tetratricopeptide TPR_1 repeat-containing protein [Alicycliphilus
           denitrificans K601]
 gi|329308481|gb|AEB82896.1| Tetratricopeptide TPR_1 repeat-containing protein [Alicycliphilus
           denitrificans K601]
          Length = 734

 Score = 40.5 bits (94), Expect = 0.29,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 35/103 (33%), Gaps = 14/103 (13%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            +    LK ++  +A   F+Q     P    A  +L+     +    ++ QA +  +  I
Sbjct: 187 NRGNALLKSRHLLEAVASFDQALALQP--QYA-DALVNRGNARLQRKEHAQAFADLDRAI 243

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
              P     D           Q++  +  D +  +  LQ   R
Sbjct: 244 RLNP-----DQAQ------SRQLMGTLLRDSKRHEEALQEFQR 275


>gi|257457422|ref|ZP_05622592.1| putative TPR domain protein [Treponema vincentii ATCC 35580]
 gi|257445151|gb|EEV20224.1| putative TPR domain protein [Treponema vincentii ATCC 35580]
          Length = 1044

 Score = 40.5 bits (94), Expect = 0.29,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 53/192 (27%), Gaps = 38/192 (19%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
             +  A E   +        G   + L   A      G Y +AA      I   P+  + 
Sbjct: 92  GRYDAALEILKKAEDI---GGDTDEILYNIAKTYKRMGNYDEAADYFSRAIEVKPDHAHA 148

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
                         + ++      T   ++   + +    N PY+               
Sbjct: 149 -----------YDRLGNLYVLTGDTDKAIEVYKQGLRVDPNHPYLN-------------- 183

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA---- 246
                +     +   Y  AI  +   L          E +  +  AY+ L  +D+A    
Sbjct: 184 ---FHLAGLLRQEKRYEEAIVYYNSALRINP---AWGEVLLGIAAAYLQLDKLDDALNTY 237

Query: 247 REVVSLIQERYP 258
           R ++ +  E  P
Sbjct: 238 RSLLRVTGENAP 249



 Score = 35.5 bits (81), Expect = 8.1,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 65/205 (31%), Gaps = 38/205 (18%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           ++E+A   L  Q+F  A +      +  P        K   + A +    G  +++ +  
Sbjct: 8   IFERANSALITQDFEYAEQLLTNVLKKHPDILPNDKTKIESLLARIYGDEGDLERSLAA- 66

Query: 118 EEYITQYPESK-NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
             Y+  Y     NVD     + +S  ++ R +          L+ + +           +
Sbjct: 67  --YLRLYEREPDNVD-----LMLSLGRIYRHLGR----YDAALEILKK----------AE 105

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                              I + Y + G Y  A   F   +    D  HA +   RL   
Sbjct: 106 DIGGDTDEIL-------YNIAKTYKRMGNYDEAADYFSRAIEVKPDHAHAYD---RLGNL 155

Query: 237 YVALALMDEAREVVSL---IQERYP 258
           YV     D+A EV      +   +P
Sbjct: 156 YVLTGDTDKAIEVYKQGLRVDPNHP 180


>gi|149922228|ref|ZP_01910666.1| hypothetical protein PPSIR1_24009 [Plesiocystis pacifica SIR-1]
 gi|149816968|gb|EDM76453.1| hypothetical protein PPSIR1_24009 [Plesiocystis pacifica SIR-1]
          Length = 407

 Score = 40.5 bits (94), Expect = 0.29,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 33/87 (37%), Gaps = 4/87 (4%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVAR---KSLLMSAFVQYSAGKYQQAASLG 117
            +    L++   ++A   F +        +  +    ++ L  A  Q   G ++ A    
Sbjct: 58  ARGEAALEDGQPARAAALFARTLGASGAGSDASGELGRAYLGLARAQEQLGDFEAAIRAY 117

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQM 144
           + +I ++P+   +  V    G   A++
Sbjct: 118 DGFIARFPDDAQLATVLARRGACEAEL 144


>gi|322419010|ref|YP_004198233.1| TPR repeat-containing protein [Geobacter sp. M18]
 gi|320125397|gb|ADW12957.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacter sp.
           M18]
          Length = 230

 Score = 40.5 bits (94), Expect = 0.29,   Method: Composition-based stats.
 Identities = 14/125 (11%), Positives = 46/125 (36%), Gaps = 14/125 (11%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
              + +L + ++ +A    +         G   ++ L    V ++  K + A    E+ +
Sbjct: 118 NLGLAYLGKGDYPQA---LSVLRAQVAKNGSDPRTRLGLGRVYFAMDKTELAVEEYEKAL 174

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                +++    +Y +G++  ++        +  +        +V    +S   + +R Y
Sbjct: 175 QL---NRSYASAHYHMGLAQMKL--------KDAQAAKGAFQEVVRLAPDSEIGQLSREY 223

Query: 182 VTVGR 186
           + + +
Sbjct: 224 LDLLK 228


>gi|91203857|emb|CAJ71510.1| similar to O-linked GlcNAc transferase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 430

 Score = 40.5 bits (94), Expect = 0.29,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 55/185 (29%), Gaps = 24/185 (12%)

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV--- 130
           + A   +       P   +AR   L  A +    G Y +A    E  I   P + +    
Sbjct: 219 NDAINLYKNLLAKDPSNIIAR---LNLADIYMENGLYDEAILEYENIIRITPNNIHALCK 275

Query: 131 ---DYVYYLVG------MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
               Y     G      + Y + I   P    A     + +  +  +         A   
Sbjct: 276 LGEAYAE--KGQPEKAILIYNKAIASNP----AFSKAYKELGSVYMQTGLYDDAISAWSK 329

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
                   +     +G  Y  +  +  AI  F+  L+   +       +  L +AY    
Sbjct: 330 FIALSPGSSKIHFNLGLAYANKDMFSEAIAAFKKALSIDPENIQT---LYHLADAYDKSG 386

Query: 242 LMDEA 246
           L+D+A
Sbjct: 387 LIDDA 391



 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 58/186 (31%), Gaps = 44/186 (23%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFL----------------------KEQNFSKA 76
            +  S  +   ++ D+  +  +Y++A+L                        ++    KA
Sbjct: 230 AKDPSNIIARLNLADIYMENGLYDEAILEYENIIRITPNNIHALCKLGEAYAEKGQPEKA 289

Query: 77  YEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
              +N+     P F+    K+      V    G Y  A S   ++I   P S  +   ++
Sbjct: 290 ILIYNKAIASNPAFS----KAYKELGSVYMQTGLYDDAISAWSKFIALSPGSSKI---HF 342

Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP----YVKGARFYVTVGRNQLAA 191
            +G++YA                +    + +     +     ++  A     +  +  A 
Sbjct: 343 NLGLAYANKD--------MFSEAIAAFKKALSIDPENIQTLYHLADAYDKSGLIDD--AF 392

Query: 192 KEVEIG 197
            E  I 
Sbjct: 393 HEYNIA 398


>gi|47940054|gb|AAH71516.1| FK506 binding protein 4 [Danio rerio]
          Length = 450

 Score = 40.5 bits (94), Expect = 0.29,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 42/145 (28%), Gaps = 27/145 (18%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRD-------FPFAGVARKSL-----LMSAFVQYSAGK 109
           EK   + KE  + +A   + +            P      K+L     L  A        
Sbjct: 270 EKGTQYFKEGKYKQAIVQYKRIVSWLEHESSMQPDDEEKAKALRLAAYLNLAMCYLKLQD 329

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
              A    ++ +     ++      +  G +   M        +   +      R++E Y
Sbjct: 330 ANPALENCDKALELDANNEK---ALFRRGEALVVM--------KEFDMAKVDFQRVIELY 378

Query: 170 TNSPYVKGARFYVTVGRNQL-AAKE 193
             +     A+  +++ +  +    E
Sbjct: 379 PANK---AAKSQISICQKHMREQHE 400


>gi|41393101|ref|NP_958877.1| peptidyl-prolyl cis-trans isomerase FKBP4 [Danio rerio]
 gi|28279562|gb|AAH45387.1| FK506 binding protein 4 [Danio rerio]
 gi|182891952|gb|AAI65584.1| Fkbp4 protein [Danio rerio]
          Length = 449

 Score = 40.5 bits (94), Expect = 0.29,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 42/145 (28%), Gaps = 27/145 (18%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRD-------FPFAGVARKSL-----LMSAFVQYSAGK 109
           EK   + KE  + +A   + +            P      K+L     L  A        
Sbjct: 270 EKGTQYFKEGKYKQAIVQYKRIVSWLEHESSMQPDDEEKAKALRLAAYLNLAMCYLKLQD 329

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
              A    ++ +     ++      +  G +   M        +   +      R++E Y
Sbjct: 330 ANPALENCDKALELDANNEK---ALFRRGEALVVM--------KEFDMAKVDFQRVIELY 378

Query: 170 TNSPYVKGARFYVTVGRNQL-AAKE 193
             +     A+  +++ +  +    E
Sbjct: 379 PANK---AAKSQISICQKHMREQHE 400


>gi|74025056|ref|XP_829094.1| hypothetical protein [Trypanosoma brucei TREU927]
 gi|70834480|gb|EAN79982.1| hypothetical protein, conserved [Trypanosoma brucei]
          Length = 411

 Score = 40.5 bits (94), Expect = 0.29,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 7/75 (9%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSA 107
           +++  V+ +RE YE+A+   + + F     Y   +     P+  +A   L   A      
Sbjct: 178 NAIAQVQVEREAYEEALKEYESELFIY--RYLEQEIPASLPYGRLAA-VLYEIADCYMKE 234

Query: 108 GKYQQAASLGEEYIT 122
           G ++ A    E +I 
Sbjct: 235 GDFEGAE---ERFIK 246


>gi|261335044|emb|CBH18038.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
           DAL972]
          Length = 407

 Score = 40.1 bits (93), Expect = 0.29,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 7/75 (9%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSA 107
           +++  V+ +RE YE+A+   + + F     Y   +     P+  +A   L   A      
Sbjct: 174 NAIAQVQVEREAYEEALKEYESELFIY--RYLEQEIPASLPYGRLAA-VLYEIADCYMKE 230

Query: 108 GKYQQAASLGEEYIT 122
           G ++ A    E +I 
Sbjct: 231 GDFEGAE---ERFIK 242


>gi|168210749|ref|ZP_02636374.1| tetratricopeptide repeat protein [Clostridium perfringens B str.
           ATCC 3626]
 gi|170711194|gb|EDT23376.1| tetratricopeptide repeat protein [Clostridium perfringens B str.
           ATCC 3626]
          Length = 473

 Score = 40.1 bits (93), Expect = 0.29,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 44/142 (30%), Gaps = 14/142 (9%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM--SAF---- 102
           +++      +++Y K     KE+ +  A + F +    + F+     S L     +    
Sbjct: 338 ENLMKTDGVKDLYLKGSDLFKEKKYEDALKDFEKA---YAFSS---DSYLRPHLIYFMGT 391

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
              +  K  +A    +EY+  Y    + +   Y        +      +        +Y 
Sbjct: 392 SYENLDKNTEAIKYFQEYLKDYKAKPDAEDFMY-TPQCLYNLAILYNKEGNNA-ESKKYA 449

Query: 163 SRIVERYTNSPYVKGARFYVTV 184
             I   Y N+ +       +  
Sbjct: 450 QEIENDYPNTMFYNDVTKKIIY 471



 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 27/73 (36%), Gaps = 6/73 (8%)

Query: 200 YLKRGEYVAAIPRFQLVLANY---SDAE---HAEEAMARLVEAYVALALMDEAREVVSLI 253
           Y    +   AI  FQ  L +Y    DAE   +  + +  L   Y       E+++    I
Sbjct: 393 YENLDKNTEAIKYFQEYLKDYKAKPDAEDFMYTPQCLYNLAILYNKEGNNAESKKYAQEI 452

Query: 254 QERYPQGYWARYV 266
           +  YP   +   V
Sbjct: 453 ENDYPNTMFYNDV 465


>gi|332881091|ref|ZP_08448759.1| tetratricopeptide repeat protein [Capnocytophaga sp. oral taxon 329
           str. F0087]
 gi|332681003|gb|EGJ53932.1| tetratricopeptide repeat protein [Capnocytophaga sp. oral taxon 329
           str. F0087]
          Length = 831

 Score = 40.1 bits (93), Expect = 0.29,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 32/84 (38%), Gaps = 8/84 (9%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y +AV     + + +A E F +     P    A    L  A+  Y+  +YQ+  +   +
Sbjct: 722 LYVEAVNLYNNRRYPEAVEAFTKFLEKVP--AHADAYRLR-AYSYYNLQQYQKVIADINQ 778

Query: 120 YITQ-YPESK----NVDYVYYLVG 138
             +   P            YY++G
Sbjct: 779 MESLGNPIDPILNNYRASCYYMIG 802


>gi|312882599|ref|ZP_07742339.1| tol-pal system protein YbgF [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309369759|gb|EFP97271.1| tol-pal system protein YbgF [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 253

 Score = 40.1 bits (93), Expect = 0.29,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 47/127 (37%), Gaps = 15/127 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            Q   D+  ++R     +       + Y +S +   + +++              G+ Y 
Sbjct: 140 YQNAVDLILEKRDYTGAIAAFQAFQKNYPDSNFTPNSHYWL--------------GQLYF 185

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + +   A+  F  V+A Y D+    +A+ +L +  +     ++A++    +   YP   
Sbjct: 186 AKKQDKEAVKSFAAVVA-YKDSVKRADALVKLGDIAMRNNNEEQAKKYYQQVVSEYPNSS 244

Query: 262 WARYVET 268
            A   + 
Sbjct: 245 SAELAKK 251



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 50/129 (38%), Gaps = 14/129 (10%)

Query: 57  QREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           ++  Y+ AV   L++++++ A   F    +++P +     S      + ++  + ++A  
Sbjct: 136 EKTAYQNAVDLILEKRDYTGAIAAFQAFQKNYPDSNFTPNSHYWLGQLYFAKKQDKEAV- 194

Query: 116 LGEEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
             + +     Y +S         +G        D+       +   +Y  ++V  Y NS 
Sbjct: 195 --KSFAAVVAYKDSVKRADALVKLG--------DIAMRNNNEEQAKKYYQQVVSEYPNSS 244

Query: 174 YVKGARFYV 182
             + A+  +
Sbjct: 245 SAELAKKNL 253



 Score = 35.1 bits (80), Expect = 9.9,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 3/71 (4%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           L++ +Y  AI  FQ    NY D+     +   L + Y A     EA +  + +   Y   
Sbjct: 148 LEKRDYTGAIAAFQAFQKNYPDSNFTPNSHYWLGQLYFAKKQDKEAVKSFAAVVA-YKDS 206

Query: 261 YWARYVETLVK 271
              +  + LVK
Sbjct: 207 V--KRADALVK 215


>gi|257095754|ref|YP_003169395.1| tol-pal system protein YbgF [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257048278|gb|ACV37466.1| tol-pal system protein YbgF [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 264

 Score = 40.1 bits (93), Expect = 0.29,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 40/115 (34%), Gaps = 22/115 (19%)

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
              +P+S      YY +G ++  +        R  K  +     +V ++  +P    A  
Sbjct: 172 ARAHPDSALTPSAYYWLGNAHYAL--------RDCKKAIDAHRVVVAKWPANPKAPDALL 223

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
            V   + +LA       +          A    + ++A Y D+  A  A  RL +
Sbjct: 224 NVATCQQELAD-----AK---------GAKGTLEALVAKYPDSTAATTARQRLKK 264


>gi|254490096|ref|ZP_05103288.1| type IV pilus biogenesis/stability protein PilW [Methylophaga
           thiooxidans DMS010]
 gi|224464684|gb|EEF80941.1| type IV pilus biogenesis/stability protein PilW [Methylophaga
           thiooxydans DMS010]
          Length = 256

 Score = 40.1 bits (93), Expect = 0.29,   Method: Composition-based stats.
 Identities = 29/273 (10%), Positives = 73/273 (26%), Gaps = 59/273 (21%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K   +    + +  L                 D +         + +++  +++ A E
Sbjct: 1   MSKGVQSWVLMVVILALTACNTTGGTRPEY-VAPDPKAAEINMRLGLNYMQRGDYAIALE 59

Query: 79  YFNQCSRDFPF--AGVARKSLL-------MSAFVQY-----SAGKYQQA----------- 113
              +  +  P   +     +LL         A   +      A +Y +A           
Sbjct: 60  KLQKALKQNPNLPSAHNTIALLHQRLGEDDKAEAHFLEAVERAPEYSEAQNNFGVFLCQQ 119

Query: 114 ---ASLGEEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
                    ++     P   +        G+     I D       T+    Y  + ++ 
Sbjct: 120 GRYQDAETRFLKAVENPLYNSKAMALENAGLC-VNRIPD-------TEKAESYFRKALQI 171

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
                 +  +   +        + E +    YL+   Y   I R+Q        +    +
Sbjct: 172 QPT---LTKSLLQMATI-----SYEQQS---YLQARAY---IQRYQ------QASSWTPQ 211

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           ++   ++    L   D       +++ R+P   
Sbjct: 212 SLFLAIKTENKLNDQDAVSSYSLILRSRFPDSD 244


>gi|213962754|ref|ZP_03391015.1| tetratricopeptide TPR_2 repeat protein [Capnocytophaga sputigena
           Capno]
 gi|213954749|gb|EEB66070.1| tetratricopeptide TPR_2 repeat protein [Capnocytophaga sputigena
           Capno]
          Length = 412

 Score = 40.1 bits (93), Expect = 0.29,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 79/229 (34%), Gaps = 31/229 (13%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
           +  + +      T  +    +   A ++++++   +A + F    + +P     + + ++
Sbjct: 202 KAGTHEKARVEKTPSKRADIIKNIAFIYVEQKKVDEAIKAFEDAKKAYP-----KDANII 256

Query: 100 SAFV--QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
            A           ++   L +E     P + ++   +Y +G+   Q        Q     
Sbjct: 257 LAEANVYLQLDNKEKFKQLMQEAAQLDPNNADL---HYNIGVINMQ--------QGNILE 305

Query: 158 MLQYMSRIVERYTNSPYVKGAR----------FYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
             +   + ++   N  Y   A             +    N+L   + +I ++   R +  
Sbjct: 306 ARKGFEQALKIKPN--YADAALNISTTYINEGNGLIEQMNKLGNSKADIAKFEALRDQKD 363

Query: 208 AAIPRFQLVLANYSDAE-HAEEAMARLVEAYVALALMDEAREVVSLIQE 255
               +   VL NY+ A  + E  + +L   Y AL      + V  L+ +
Sbjct: 364 GLFKKGAEVLENYTKANGNVENILEQLKNIYGALGDSANFQRVKKLLGQ 412


>gi|325840872|ref|ZP_08167207.1| diguanylate cyclase (GGDEF) domain protein [Turicibacter sp. HGF1]
 gi|325490129|gb|EGC92467.1| diguanylate cyclase (GGDEF) domain protein [Turicibacter sp. HGF1]
          Length = 650

 Score = 40.1 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 64/202 (31%), Gaps = 26/202 (12%)

Query: 9   ICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL 68
           +       + + K   +++   +   +       S    L+ V D       Y +A   L
Sbjct: 139 LAEKNVSKFYMTKLKSSLYRRFSQGIVDFSSNPQSSIPLLEFVIDKNVNEYDYLEAHRLL 198

Query: 69  K-----EQNFSKAYEYFNQCSRDFPFAGV---ARKSLLMSAFVQYSAGKYQQAASLGEEY 120
                    + K+  Y     R   +        +  +      +  G Y+QA S+ E  
Sbjct: 199 TNVYLLSGYYEKSIMYLLDAYRVSVWNDYKIIQEEVSIKLGQAYFLNGDYEQAISILE-- 256

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
            + +P +K  D+      +SY   + +     +     +++++  V     S     +  
Sbjct: 257 -SLFPRNKKDDF------ISYIPQLVESYRVVQGYDKAIEFLNDYV-----SQLSVESSE 304

Query: 181 YVTV----GRNQLAAKEVEIGR 198
           ++       R  LA  E ++  
Sbjct: 305 WLDFWYTWIRASLAINEGKVAE 326


>gi|297848776|ref|XP_002892269.1| calcium-binding EF hand family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338111|gb|EFH68528.1| calcium-binding EF hand family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 809

 Score = 40.1 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 51/158 (32%), Gaps = 17/158 (10%)

Query: 14  AWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF 73
            WAY L +  + +  ++    +V    +  R+  +   T  R  + +            +
Sbjct: 305 QWAYLLPQIYVNLGIALEGEGMVLSACEYYREAAILCPTHFRALKLL---GSALFGVGEY 361

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
             A +        +     A  +    A   +S G+ ++A  + +  I   P   +    
Sbjct: 362 RAAVKALE--EAIYLKPDYA-DAHCDLASSLHSMGEDERAIEVFQRAIDLKPGHVD---A 415

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            Y +G  Y         D    +   +  +R++  + N
Sbjct: 416 LYNLGGLYM--------DLGRFQRASEMYTRVLAVWPN 445


>gi|254442097|ref|ZP_05055573.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
           DG1235]
 gi|198256405|gb|EDY80713.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
           DG1235]
          Length = 506

 Score = 40.1 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 43/122 (35%), Gaps = 8/122 (6%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL-- 97
             ++        T    +  +Y+ AV   +  N+ +A   F +          +  +   
Sbjct: 338 TSAADSSTTAETTGDELELSLYDSAVAAYEAGNYDEAIPLFWELL-----GENSNDAQAW 392

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
              +   Y    +  A S   E   + P S+ + +  YL+ +   Q I  V  + +A +L
Sbjct: 393 FRLSQAYYMQNNWYDAESTILEAKRRAPRSEVIAH-QYLLTIRNTQNITSVLEEIKALRL 451

Query: 158 ML 159
           + 
Sbjct: 452 LF 453


>gi|46136823|ref|XP_390103.1| hypothetical protein FG09927.1 [Gibberella zeae PH-1]
          Length = 613

 Score = 40.1 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 46/141 (32%), Gaps = 20/141 (14%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDF 87
           ++   +G   ++  +       D       Y +A     + + + A + + +     +DF
Sbjct: 367 SISLELGEPEKAEAEFAKALEQDKNDPDVYYHRAQAHFIKGDLADAQKDYQKSIDLDKDF 426

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
            F+       +     QY  G    + +     I  +P+  +V Y YY           +
Sbjct: 427 IFSH------IQLGVTQYKMGSIASSMATFRRCIKNFPKVPDV-YNYY----------GE 469

Query: 148 VPYDQRATKLMLQYMSRIVER 168
           +  DQ      ++     +E 
Sbjct: 470 LLLDQGNFSEAVEKFDTAMEM 490


>gi|315646851|ref|ZP_07899966.1| TPR domain protein [Paenibacillus vortex V453]
 gi|315277781|gb|EFU41105.1| TPR domain protein [Paenibacillus vortex V453]
          Length = 865

 Score = 40.1 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 14/123 (11%), Positives = 41/123 (33%), Gaps = 17/123 (13%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ-CSRD-FPFAGVARKSLLMSAFVQYSA 107
            + D + Q   +E          + +A + F+    R+  P+A          AF ++  
Sbjct: 554 KLDDDKGQEHYFEYGSALRLNGQYREAVQIFDADIERNNHPYAYY------NRAFARFML 607

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +++   +    ++   P     D    + G+S   +        +     + + + +++
Sbjct: 608 KEFELCRADLRIFMELVPGDSQFD-ANLISGISSFYL--------KDWNAAVSFFNEMLK 658

Query: 168 RYT 170
              
Sbjct: 659 YLP 661


>gi|319761242|ref|YP_004125179.1| tetratricopeptide tpr_1 repeat-containing protein [Alicycliphilus
           denitrificans BC]
 gi|317115803|gb|ADU98291.1| Tetratricopeptide TPR_1 repeat-containing protein [Alicycliphilus
           denitrificans BC]
          Length = 734

 Score = 40.1 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 35/103 (33%), Gaps = 14/103 (13%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            +    LK ++  +A   F+Q     P    A  +L+     +    ++ QA +  +  I
Sbjct: 187 NRGNALLKSRHLLEAVASFDQALALQP--QYA-DALVNRGNARLQRKEHAQAFADLDRAI 243

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
              P     D           Q++  +  D +  +  LQ   R
Sbjct: 244 RLNP-----DQAQ------SRQLMGTLLRDSKRHEEALQEFQR 275


>gi|298372614|ref|ZP_06982604.1| tetratricopeptide repeat (TPR) family protein [Bacteroidetes oral
           taxon 274 str. F0058]
 gi|298275518|gb|EFI17069.1| tetratricopeptide repeat (TPR) family protein [Bacteroidetes oral
           taxon 274 str. F0058]
          Length = 672

 Score = 40.1 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 49/154 (31%), Gaps = 30/154 (19%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K  L++F ++ +  + G                      +       +   ++  A +
Sbjct: 2   MKKTILSLFVAVNITLVCG----------------QVNTEHLMRVGNNAMYFNDYVLAIQ 45

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
           YFN+     P      ++ +  AF + S   Y  A    +  I    +++ + + YY  G
Sbjct: 46  YFNKVINAKP---YIEQAYMYRAFAKISLEDYNGALDDLDRAIA---KNQFIPHAYYARG 99

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
             Y ++                  S+ +E    +
Sbjct: 100 YVYNRL--------GEYAKAESDFSKALELSPEN 125


>gi|42522225|ref|NP_967605.1| hypothetical protein Bd0635 [Bdellovibrio bacteriovorus HD100]
 gi|39574756|emb|CAE78598.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100]
          Length = 223

 Score = 40.1 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 11/98 (11%), Positives = 36/98 (36%), Gaps = 11/98 (11%)

Query: 93  ARKSL---LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           A+++      +A   +    ++Q+    ++Y  + P+        Y +G+S+ ++     
Sbjct: 134 AKQAKRDAFEAAQEFFGKKDWKQSILNFQKYRDENPKGPKFADATYKIGVSFQEL----- 188

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
                      +   +V ++  S   + A+  +   + 
Sbjct: 189 ---GMKDEAKTFYDEVVSKFPKSEEARRAKIRLKGLKK 223


>gi|327540348|gb|EGF26934.1| hypothetical protein RBWH47_03973 [Rhodopirellula baltica WH47]
          Length = 903

 Score = 40.1 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 68/226 (30%), Gaps = 37/226 (16%)

Query: 61  YEKAVLFLKEQNFSKAYE-YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y+ AV   +   +  A     ++  R       + +   +    Q + G Y  A     E
Sbjct: 65  YDDAVQQFRNGQYDAAATTAASEVER----GVWSERWPRLLIQCQLTQGDYADALQTYRE 120

Query: 120 YITQYPESKNVDYVYYLVGMS---YAQMIRDVPYDQRATKLMLQ-YMSRIVERY------ 169
            + +YP S  + Y+    G+    +  +  +V   +      +Q   +  + R       
Sbjct: 121 ALQRYPTSIALRYM----GLDVLRFNGLHDEVGTAEADLFAQMQRAFAGYITRDNLIAAG 176

Query: 170 ----TNSPYVKGARFYV---------TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                     +                     LA  E+ I     ++G++  A    Q  
Sbjct: 177 RFLTGRGEDARKVLEMFYDRVRDRDPDYLDAYLATAELAI-----RKGDFQVAANTLQQA 231

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           L    +       +A+ +E+    A  ++    + +  +  P   W
Sbjct: 232 LKLEEETPDLHHLLAKAMESSDGQAATEQIAIALRINPQHLPSLQW 277


>gi|238881088|gb|EEQ44726.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 978

 Score = 40.1 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 38/130 (29%), Gaps = 25/130 (19%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGK 109
           D       Y    + +   +F+ AYE F Q        P              + Y   +
Sbjct: 358 DQSDAHSWYYLGRVEMIRGDFTAAYEAFQQAVNRDARNP-TFWC-----SIGVLYYQISQ 411

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSY---AQMIRDVPYDQRATKLMLQYMSRIV 166
           Y+ A       I   P    +  V+Y +G  Y      I D           L    +  
Sbjct: 412 YRDALDAYTRAIRLNP---YISEVWYDLGTLYETCNNQISD----------ALDAYRQAE 458

Query: 167 ERYTNSPYVK 176
               N+P++K
Sbjct: 459 RLDPNNPHIK 468


>gi|146281535|ref|YP_001171688.1| putative lipoprotein [Pseudomonas stutzeri A1501]
 gi|145569740|gb|ABP78846.1| lipoprotein, putative [Pseudomonas stutzeri A1501]
 gi|327479712|gb|AEA83022.1| putative lipoprotein [Pseudomonas stutzeri DSM 4166]
          Length = 125

 Score = 40.1 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 30/92 (32%), Gaps = 13/92 (14%)

Query: 98  LMSAFVQYSAGKYQ---QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           L  A+  Y A   +   Q+ S  E      P S+    +  L G    +        Q  
Sbjct: 26  LDEAYRHYEADNCERVMQSLSQAER--RSKPRSQAQPEISLLRGQCLER--------QGL 75

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
                +    I+ER+  S Y   AR  +   R
Sbjct: 76  FVDAAETYRFIIERFPASEYAYRARARLETLR 107


>gi|197118045|ref|YP_002138472.1| TPR domain-containing protein [Geobacter bemidjiensis Bem]
 gi|197087405|gb|ACH38676.1| TPR domain lipoprotein [Geobacter bemidjiensis Bem]
          Length = 250

 Score = 40.1 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 14/128 (10%), Positives = 47/128 (36%), Gaps = 16/128 (12%)

Query: 62  EKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
              + +L +  + +A     N+  ++   +    +  L    V ++  K + A    ++ 
Sbjct: 138 NLGLAYLGKGEYQQALTVLRNEVGKN--GSD--PRIRLNLGRVYFALQKNELAVEEYQKA 193

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +     +++    YY +G++  ++        +           +V    +S   + +R 
Sbjct: 194 LQL---NRSYASAYYHLGLAQMKL--------KDADAAKSAFQDVVRLAPDSEIGQLSRE 242

Query: 181 YVTVGRNQ 188
           Y+ + + +
Sbjct: 243 YLELLKVR 250


>gi|15921045|ref|NP_376714.1| hypothetical protein ST0810 [Sulfolobus tokodaii str. 7]
 gi|15621829|dbj|BAB65823.1| 661aa long hypothetical protein [Sulfolobus tokodaii str. 7]
          Length = 661

 Score = 40.1 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 14/76 (18%)

Query: 68  LKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY--ITQY 124
           L ++N+ +A +YF     R   F+      +L  A     AG+Y++A  L EE   I + 
Sbjct: 245 LGKKNYKEAVKYFEEALKRRRDFSN-----MLTLAHAYILAGEYKKALDLIEEAEKIRRN 299

Query: 125 PESKNVDYVYYLVGMS 140
            +S       YL G++
Sbjct: 300 AQSA------YLKGLA 309


>gi|88704866|ref|ZP_01102579.1| conserved hypothetical protein [Congregibacter litoralis KT71]
 gi|88701187|gb|EAQ98293.1| conserved hypothetical protein [Congregibacter litoralis KT71]
          Length = 513

 Score = 40.1 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 41/120 (34%), Gaps = 25/120 (20%)

Query: 60  VYEKAVLFLKE-----QNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           +Y  A   +           +A + +                RK+LL  A    S GK Q
Sbjct: 189 LYTDAFNDIGNLLNDMGKHEEAIKAYESALNIEPRH------RKALLNLALSYSSMGKPQ 242

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            A +L +E I   PE +       L G++ A +      D       +QY+ R++     
Sbjct: 243 LAIALYQELIEMQPEDRRT-----LSGIANALLALGRDKD------AIQYLERLLRLNPE 291


>gi|152993345|ref|YP_001359066.1| hypothetical protein SUN_1762 [Sulfurovum sp. NBC37-1]
 gi|151425206|dbj|BAF72709.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
          Length = 282

 Score = 40.1 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 20/146 (13%), Positives = 46/146 (31%), Gaps = 11/146 (7%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
           ++ S               ++Y + V    ++ +++A + F        +   A    L 
Sbjct: 148 KEKSTKSTDSESLGKSSNAKLYSEGVRLFNKKRYNEAKKRFTITDSKG-YKPAASNYYLG 206

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
                Y   KY  A    ++    Y ++  +D +    G+S  +            +   
Sbjct: 207 EI-AYY-TKKYDDAIFYFKKSAGLYDQASYIDTLLLHTGISLEKT--------GEKEQAR 256

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVG 185
            +   I+E Y+     K A+  +   
Sbjct: 257 AFYKNIIENYSGKKSAKIAKDRLKKL 282


>gi|114778369|ref|ZP_01453216.1| Spermine synthase [Mariprofundus ferrooxydans PV-1]
 gi|114551332|gb|EAU53889.1| Spermine synthase [Mariprofundus ferrooxydans PV-1]
          Length = 946

 Score = 40.1 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 37/126 (29%), Gaps = 10/126 (7%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
               ++E   L ++E  ++ A   F    R  P                  +G    A  
Sbjct: 812 TPAALHEFGYLLMREGWYADAIAVFKYVLRQDPEHRYTA---FNLGACYEYSGDLPAALR 868

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN-SPY 174
             EE     P+  +V    Y +G  Y +  R     Q + K  L  M        +   Y
Sbjct: 869 AYEEAGRVEPDDADVP---YRIGRVYVKQGR-FDDAQASLKHALALMGE--NGRPDIYRY 922

Query: 175 VKGARF 180
           +  A  
Sbjct: 923 LAKAYE 928


>gi|77735597|ref|NP_001029494.1| peptidyl-prolyl cis-trans isomerase FKBP4 [Bos taurus]
 gi|108935840|sp|Q9TRY0|FKBP4_BOVIN RecName: Full=Peptidyl-prolyl cis-trans isomerase FKBP4;
           Short=PPIase FKBP4; AltName: Full=52 kDa FK506-binding
           protein; Short=52 kDa FKBP; Short=FKBP-52; AltName:
           Full=FK506-binding protein 4; Short=FKBP-4; AltName:
           Full=HSP-binding immunophilin; Short=HBI; AltName:
           Full=Immunophilin FKBP52; AltName: Full=Rotamase;
           Contains: RecName: Full=Peptidyl-prolyl cis-trans
           isomerase FKBP4, N-terminally processed
 gi|74354621|gb|AAI02457.1| FK506 binding protein 4, 59kDa [Bos taurus]
 gi|146231792|gb|ABQ12971.1| FK506-binding protein 4 [Bos taurus]
          Length = 459

 Score = 40.1 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 14/140 (10%), Positives = 43/140 (30%), Gaps = 26/140 (18%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFA-----GVARKSL-------LMSAFVQYSAGK 109
           E+  ++ KE  + +A   + +      +        A K+        L  A        
Sbjct: 275 ERGTVYFKEGKYKQAVLQYKKIVSWLEYESSFSDEDAEKAQALRLASHLNLAMCHLKLQA 334

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           +  A     + +     ++      +  G ++   + D                ++++ Y
Sbjct: 335 FSAAIENCNKALELDSNNEKG---LFRRGEAHL-AVNDFDL-------ARADFQKVLQLY 383

Query: 170 TNSPYVKGARFYVTVGRNQL 189
            ++     A+  + V + ++
Sbjct: 384 PSNK---AAKAQLVVCQQRI 400



 Score = 35.9 bits (82), Expect = 6.5,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 32/78 (41%), Gaps = 2/78 (2%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKAYEYF 80
             L    ++A+C L      ++ +    ++  D   ++ ++ +    L   +F  A   F
Sbjct: 317 LRLASHLNLAMCHLKLQAFSAAIENCNKALELDSNNEKGLFRRGEAHLAVNDFDLARADF 376

Query: 81  NQCSRDFPFAGVARKSLL 98
            +  + +P +  A K+ L
Sbjct: 377 QKVLQLYP-SNKAAKAQL 393


>gi|73667569|ref|YP_303584.1| hypothetical protein Mbar_A0011 [Methanosarcina barkeri str. Fusaro]
 gi|72394731|gb|AAZ69004.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 1138

 Score = 40.1 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 64/198 (32%), Gaps = 38/198 (19%)

Query: 60   VYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLG 117
            +Y++        +F  A   +++     P        K      FV Y   KYQQA    
Sbjct: 859  IYKQGKALENSGDFEGAVGCYDRILELDPGNVGAYNNK-----GFVLYKLEKYQQAIDCY 913

Query: 118  EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
            ++ +   P++      +Y  G +Y  +  +        K  L   ++ V+   +      
Sbjct: 914  DKALEYSPDNVT---AWYFQGCTYLTLSSN--------KAALNCFNKTVQLKPDCI---T 959

Query: 178  ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
            A +      N +   E               A+  +  VLA   ++     A+     A 
Sbjct: 960  AWYNKGYIHNMMGETE--------------EAVSCYDNVLAISPNSPS---ALYNKRFAL 1002

Query: 238  VALALMDEAREVVSLIQE 255
              L  +DEA    + + E
Sbjct: 1003 YTLKKLDEAAACKAKLDE 1020


>gi|321478547|gb|EFX89504.1| hypothetical protein DAPPUDRAFT_303263 [Daphnia pulex]
          Length = 712

 Score = 40.1 bits (93), Expect = 0.31,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 37/93 (39%), Gaps = 7/93 (7%)

Query: 52  TDVRYQREVYEK--AVLFLKEQNFSKAYEYFNQCSRDFP---FAGVARKSLLMSAFVQYS 106
             V Y+  ++ +        + + + A     + S  +       ++  SLL  A+  Y 
Sbjct: 278 PHVWYEAALFLQISTKTLSDKGDVTAAKNLAEEVSNIYERSINGPMSHNSLLYFAYADYE 337

Query: 107 AG--KYQQAASLGEEYITQYPESKNVDYVYYLV 137
            G  KY +A  +  +Y+ Q+     + Y+ Y+ 
Sbjct: 338 EGRIKYDKAHQIYTKYLEQHDIDPTLGYIQYMR 370


>gi|262376182|ref|ZP_06069412.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
 gi|262308783|gb|EEY89916.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
          Length = 265

 Score = 40.1 bits (93), Expect = 0.31,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 6/78 (7%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y  G   +A +  + +I   P S  +   Y+   ++   +  D P          +    
Sbjct: 159 YKNGGAAKAIAPMQNFIKNNPNSVYISNAYFW--LAEFNLAIDPPK----FDEAKRNYLI 212

Query: 165 IVERYTNSPYVKGARFYV 182
           +V+RY NS     A + +
Sbjct: 213 VVDRYPNSAKASTALYQL 230


>gi|254482621|ref|ZP_05095859.1| tetratricopeptide repeat domain protein [marine gamma
           proteobacterium HTCC2148]
 gi|214036980|gb|EEB77649.1| tetratricopeptide repeat domain protein [marine gamma
           proteobacterium HTCC2148]
          Length = 749

 Score = 40.1 bits (93), Expect = 0.31,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 9/72 (12%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY--SAGKYQQAASLG 117
           VY  A+  L   N  +A    N+ +R FP         ++ A   Y    G Y +A +  
Sbjct: 674 VYAIALHDL--GNPRQAVTELNKLNRKFPSDE-----QILLALANYSAELGDYAKARAYA 726

Query: 118 EEYITQYPESKN 129
           ++ +   P + N
Sbjct: 727 QQLVQLAPRNTN 738


>gi|163747409|ref|ZP_02154761.1| TPR-domain containing protein [Oceanibulbus indolifex HEL-45]
 gi|161379262|gb|EDQ03679.1| TPR-domain containing protein [Oceanibulbus indolifex HEL-45]
          Length = 166

 Score = 40.1 bits (93), Expect = 0.31,   Method: Composition-based stats.
 Identities = 11/75 (14%), Positives = 24/75 (32%), Gaps = 11/75 (14%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR----KSLLMSAFVQYSAGKYQQAAS 115
           +  +    + + +  +A E+    +   P    A     ++        Y A  Y  A  
Sbjct: 68  LLARGREAMADGDPRQAIEHLTALTDHAP--DFAEGFHTRAQ-----AYYGADLYGPALD 120

Query: 116 LGEEYITQYPESKNV 130
             E  +   P++ N 
Sbjct: 121 DLERTLALNPDNYNA 135


>gi|119593819|gb|EAW73413.1| hypothetical protein FLJ20699, isoform CRA_b [Homo sapiens]
          Length = 404

 Score = 40.1 bits (93), Expect = 0.31,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 45/150 (30%), Gaps = 29/150 (19%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQ----------REVYEKAVLFLKEQNFSKAYE 78
                 L+G       D  LD       +           +++  AV      NF KA E
Sbjct: 5   MATGLVLIGTGSSVKLDKELDLAVKTMVEISRTQPLTRREQLHVSAVETFANGNFPKACE 64

Query: 79  YFNQCSRDFPFAGVARKSLLMSA-----FVQYSAGKYQQAASLGEEYITQYPE-SKNVDY 132
            + Q  +D P          M A        +  G  +Q           YP  + ++  
Sbjct: 65  LWEQILQDHPTD--------MLALKFSHDAYFYLGYQEQMRDSVAR---IYPFWTPDIPL 113

Query: 133 VYYLVGMSYAQMIRDVPYDQ--RATKLMLQ 160
             Y+ G+    ++    YDQ  +  K  L 
Sbjct: 114 SSYVKGIYSFGLMETNFYDQAEKLAKEALS 143


>gi|119476362|ref|ZP_01616713.1| hypothetical protein GP2143_07924 [marine gamma proteobacterium
           HTCC2143]
 gi|119450226|gb|EAW31461.1| hypothetical protein GP2143_07924 [marine gamma proteobacterium
           HTCC2143]
          Length = 635

 Score = 40.1 bits (93), Expect = 0.31,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 44/133 (33%), Gaps = 23/133 (17%)

Query: 21  KFALTIFFSIAVCFLV---GWERQSSRDVYLDSVTDVRYQ-REVYEK----AVLFLKEQN 72
           +  L +F  +    L    GW       V L   T    +  +++++      + +++ +
Sbjct: 311 RGPLLVFLILPFALLAFRRGWLLVLPLVVILQPETGHALEWEDLWQRPDQRGEVAMQQGD 370

Query: 73  FSKAYEYFN----QCSRDFPFAGV----ARKSLLMSAFVQY-------SAGKYQQAASLG 117
             +A  YF     + S D+         A       A   Y        +GK  +A    
Sbjct: 371 PEQAARYFEHKQWRASADYRSGNYKGATAGFGQEEDADAHYNLGNSLAKSGKLDEAIDAY 430

Query: 118 EEYITQYPESKNV 130
           E  + Q P  ++ 
Sbjct: 431 ENALEQQPTMEDA 443


>gi|295094234|emb|CBK83325.1| Protein kinase domain. [Coprococcus sp. ART55/1]
          Length = 711

 Score = 40.1 bits (93), Expect = 0.31,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 64/176 (36%), Gaps = 30/176 (17%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           +     +    A C ++G  ++         + D+ Y  +V  +A   + E +++KA+E 
Sbjct: 286 FSVVAGLSILSACCAVIGGVKKG-------QLKDLDYNNKV-NEARDAVDEGDYNKAFEC 337

Query: 80  FNQCSRDFPFAGVARKSLL--MSAFVQYSAGK----YQQAASLGEEYITQYPESKN--VD 131
           +       P    A  + +  M  +  Y             +  E+ I    ++K+   D
Sbjct: 338 YKAAVDIDPT---ASDAYIGYMETYAYYYTEDDGNTSANTETAAEKGIRLALKNKDEIKD 394

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE--RYTNSPYVKGARFYVTVG 185
            V + + M Y   ++D            +Y + + E   + +    K A++Y  + 
Sbjct: 395 DVKFKIAMLYYDEVKDYS-------AAKKYFNMVDESKDFPDQ--AKQAKYYAAIC 441


>gi|149192089|ref|ZP_01870313.1| hypothetical protein VSAK1_00450 [Vibrio shilonii AK1]
 gi|148834075|gb|EDL51088.1| hypothetical protein VSAK1_00450 [Vibrio shilonii AK1]
          Length = 262

 Score = 40.1 bits (93), Expect = 0.31,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 44/152 (28%), Gaps = 30/152 (19%)

Query: 84  SRDFPFAGVARKSLLMSAFVQ-----YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
               P    +  +   +A+            Y  A    +++   YP S  +   +Y +G
Sbjct: 130 DSTAPQGKFSTDADEQTAYQNAVDLILKKRDYAGAIEAFKQFQKDYPNSTFMPNTHYWLG 189

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
             Y    +D            +    ++  +  S     A   +                
Sbjct: 190 QLYFAKRQDS--------EAEKSFKAVL-GFKESNKRADALVKLGDL------------- 227

Query: 199 YYLKRGEYVA-AIPRFQLVLANYSDAEHAEEA 229
              KRG   A A   ++ V+A Y  +  A+ A
Sbjct: 228 --AKRGNKAAEAKKYYEQVIAEYPGSSSAKVA 257



 Score = 35.9 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 49/130 (37%), Gaps = 15/130 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            Q   D+   +R     ++   +  + Y NS ++    +++              G+ Y 
Sbjct: 148 YQNAVDLILKKRDYAGAIEAFKQFQKDYPNSTFMPNTHYWL--------------GQLYF 193

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + +   A   F+ VL  + ++    +A+ +L +         EA++    +   YP   
Sbjct: 194 AKRQDSEAEKSFKAVL-GFKESNKRADALVKLGDLAKRGNKAAEAKKYYEQVIAEYPGSS 252

Query: 262 WARYVETLVK 271
            A+  ++ +K
Sbjct: 253 SAKVAQSNLK 262


>gi|123975181|ref|XP_001330228.1| TPR Domain containing protein [Trichomonas vaginalis G3]
 gi|121896222|gb|EAY01380.1| TPR Domain containing protein [Trichomonas vaginalis G3]
          Length = 705

 Score = 40.1 bits (93), Expect = 0.31,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 64/230 (27%), Gaps = 35/230 (15%)

Query: 33  CFLVGWERQSSRDVYLDSV-TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
           C +       +RD YL+++  +      +Y   V+      + +A + F + +R  P   
Sbjct: 390 CLMQSNHEDEARDQYLEAIGVEADCVEALYNLGVVSKMMGQYEEALQVFEKLNRIIP--- 446

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
            A +     +     AG    A       I   P+   +          + ++      D
Sbjct: 447 KAPEVAFEISDCYEKAGFNTNAIEWLHRLINIQPKDPAI----------WRRLGAIWDRD 496

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           Q       Q      E Y    Y       +              G Y+ K+  Y  A+ 
Sbjct: 497 QNEA----QAFQCYTESY---KYCPSDIDVIQWL-----------GSYFRKKQSYDQALK 538

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            F+        A      +  +   +  +    EA      + +  P   
Sbjct: 539 FFERASEL---APKQPRYLMMVASCHRNMDQKQEALTTYEKVMQLDPNNK 585


>gi|317058938|ref|ZP_07923423.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
 gi|313684614|gb|EFS21449.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
          Length = 145

 Score = 40.1 bits (93), Expect = 0.31,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 33/76 (43%), Gaps = 8/76 (10%)

Query: 70  EQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           ++++  A  +F +                   A+V Y   KY++A    E+ +   P S 
Sbjct: 11  KKDYDTAIYFFEKLMTLDATNGNWPGF----LAYVYYEQEKYEKAIPYFEKSVDLSPNSP 66

Query: 129 NVDYVYYLVGMSYAQM 144
            +   Y+L+G SY+++
Sbjct: 67  FI---YFLLGNSYSRL 79


>gi|149633879|ref|XP_001512545.1| PREDICTED: similar to ubiquitously transcribed tetratricopeptide
           repeat, X chromosome [Ornithorhynchus anatinus]
          Length = 1373

 Score = 40.1 bits (93), Expect = 0.31,   Method: Composition-based stats.
 Identities = 24/196 (12%), Positives = 50/196 (25%), Gaps = 54/196 (27%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A +  ++  
Sbjct: 80  EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 126

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198
             ++    +    K     + +               QLA              +  I  
Sbjct: 127 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 186

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEA-----MARLVEAYVALALMDEAREVV-SL 252
            Y  + +Y +A   ++ +L    +     +A     +  +      L             
Sbjct: 187 LYETQRKYHSAKEAYEQLLQT-ENLPAQVKATVLQQLGWMHHTVDQLGDKATKESYAIQY 245

Query: 253 IQERY---PQG--YWA 263
           +Q+     P     W 
Sbjct: 246 LQKSLEADPNSGQSWY 261


>gi|322505183|emb|CAM45400.2| putative intraflagellar transport protein IFT88 [Leishmania
           braziliensis MHOM/BR/75/M2904]
          Length = 810

 Score = 40.1 bits (93), Expect = 0.31,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 65/226 (28%), Gaps = 48/226 (21%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY-- 110
           +      +Y   +   K   + +A   F +            ++L+ S  V Y       
Sbjct: 507 EADNVEAIYNLGLAAKKLGLYEEAVRTFKR-----------MQALVDSNEVLYQIADLSD 555

Query: 111 ----QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
                 A       I + P   N       +G  YA+   DV            Y     
Sbjct: 556 LVGDPSALEWFNRLIGRVPTDPN---ALARIGSLYARDGDDV--------QAFHYYLEAY 604

Query: 167 ERY--------------TNSPYVKGARF---YVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
             Y                +     A       +  + Q    ++ +   + +RG+YV A
Sbjct: 605 RYYQVNMDVISWLGAYFVKNEVYDRAVQFFERASHIQPQEVKWQLMVASCHRRRGDYVQA 664

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
              ++ +   Y D     E +  LV+      L +EA E    +++
Sbjct: 665 KRLYEQLHRKYPD---NVECLNYLVQLCKDAGLNEEANEWFKTMKK 707



 Score = 35.5 bits (81), Expect = 7.3,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 66/208 (31%), Gaps = 43/208 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFN---QCSR-----DFPFAGVARKSLLMSAFV-------QYS 106
           E A+L L+ +++  A E      +  R        +     +  +   +        QY 
Sbjct: 144 ESAMLALQ-KDYGAALEKAKDAGKLERSLCKKREQYG-FVEQINVDLTYAVHFNLAVQYQ 201

Query: 107 AGK-YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
             + Y +A +     I           V +         + ++   Q+   L ++   ++
Sbjct: 202 NHQLYTEALNTYNLIIRN---------VQFPQAGRLRVNMGNIYLAQQNYLLAIKMYRKV 252

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           ++         G      + RN        I   ++K G+Y  A   ++ V+    D   
Sbjct: 253 LDETP----TAGKELRYHLCRN--------IANAFVKLGQYRDAANSYETVVEGNGDVNA 300

Query: 226 AEEAMARLVEAYVALALMDEAREVVSLI 253
                  L+  Y AL   ++ +   + +
Sbjct: 301 T----YNLILCYYALGETEQMKRTFTRL 324


>gi|293376886|ref|ZP_06623104.1| diguanylate cyclase (GGDEF) domain protein [Turicibacter sanguinis
           PC909]
 gi|292644496|gb|EFF62588.1| diguanylate cyclase (GGDEF) domain protein [Turicibacter sanguinis
           PC909]
          Length = 650

 Score = 40.1 bits (93), Expect = 0.31,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 64/202 (31%), Gaps = 26/202 (12%)

Query: 9   ICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL 68
           +       + + K   +++   +   +       S    L+ V D       Y +A   L
Sbjct: 139 LAEKNVSKFYMTKLKSSLYRRFSQGIVDFSSNPQSSIPLLEFVIDKNVNEYDYLEAHRLL 198

Query: 69  K-----EQNFSKAYEYFNQCSRDFPFAGV---ARKSLLMSAFVQYSAGKYQQAASLGEEY 120
                    + K+  Y     R   +        +  +      +  G Y+QA S+ E  
Sbjct: 199 TNVYLLSGYYEKSIMYLLDAYRVSVWNDYKIIQEEVSIKLGQAYFLNGDYEQAISILE-- 256

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
            + +P +K  D+      +SY   + +     +     +++++  V     S     +  
Sbjct: 257 -SLFPRNKKDDF------ISYIPQLVESYRVVQGYDKAIEFLNDYV-----SQLSVESSE 304

Query: 181 YVTV----GRNQLAAKEVEIGR 198
           ++       R  LA  E ++  
Sbjct: 305 WLDFWYTWIRASLAINEGKVAE 326


>gi|225619179|ref|YP_002720405.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
 gi|225213998|gb|ACN82732.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
          Length = 467

 Score = 40.1 bits (93), Expect = 0.31,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 50/154 (32%), Gaps = 31/154 (20%)

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
           L    + Y   +Y  A    +E +   P +             +  +             
Sbjct: 140 LEIGIIYYENKQYDTAIKYFDEALDVQPNNSE---ALKYKAFCFVNI--------GNFND 188

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
            +  M+ I +++ + P               L    +  GR Y  R +Y  AI  +    
Sbjct: 189 AISGMNNIYKKFPDDP---------------LLNYNM--GRAYRGREDYKTAIRYYSN-- 229

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
            +Y D E++  ++  +   Y+ L  ++ A + + 
Sbjct: 230 -SYKDKEYSVRSLYEMGLCYIKLENIESAIKTLE 262



 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 68/205 (33%), Gaps = 45/205 (21%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           E  +++ + + +  A +YF++     P    A K     AF   + G +  A S      
Sbjct: 141 EIGIIYYENKQYDTAIKYFDEALDVQPNNSEALKYK---AFCFVNIGNFNDAISGMNNIY 197

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS----PYVKG 177
            ++P+            +    M R             +     +  Y+NS     Y   
Sbjct: 198 KKFPDDP----------LLNYNMGR--------AYRGREDYKTAIRYYSNSYKDKEYSVR 239

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL--ANYSDAEHAEEAMARLVE 235
           + + + +               Y+K     +AI   +  +   +Y D E     +  L E
Sbjct: 240 SLYEMGLC--------------YIKLENIESAIKTLEKAISYDSY-DKELNLAILYTLSE 284

Query: 236 AYVALALMDEAREVVS---LIQERY 257
            Y  +  ++++ E++    ++   Y
Sbjct: 285 CYDIVGNINKSMEILESVIVMDPNY 309


>gi|261420022|ref|YP_003253704.1| hypothetical protein GYMC61_2632 [Geobacillus sp. Y412MC61]
 gi|319766836|ref|YP_004132337.1| hypothetical protein GYMC52_1763 [Geobacillus sp. Y412MC52]
 gi|261376479|gb|ACX79222.1| Tetratricopeptide TPR_2 repeat protein [Geobacillus sp. Y412MC61]
 gi|317111702|gb|ADU94194.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacillus sp.
            Y412MC52]
          Length = 1385

 Score = 40.1 bits (93), Expect = 0.31,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 3/68 (4%)

Query: 63   KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
            +AV++L+E    KA         + P   +AR++L++        G+YQ+AA+L E Y  
Sbjct: 1239 QAVVWLQEGQHEKAERQLEAIVAEEP---LAREALMLLGEQYMETGRYQEAAALWERYTD 1295

Query: 123  QYPESKNV 130
             YPE + +
Sbjct: 1296 WYPEDEEL 1303


>gi|326432936|gb|EGD78506.1| mbre TPR repeat protein [Salpingoeca sp. ATCC 50818]
          Length = 858

 Score = 40.1 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 64/199 (32%), Gaps = 47/199 (23%)

Query: 107 AGKYQQAASLGEEYITQY-----PESKNVDYVYYLVGMSY-AQMIRDVPYDQRATKLMLQ 160
           AG+Y  A SL E  +  Y     PE  NV  VY    M+   +   +    Q   +  LQ
Sbjct: 482 AGRYDHALSLFERSLNIYLERHGPEHANVAGVY--DAMAQVYESKGEHDRAQEYFQKSLQ 539

Query: 161 -YMSRIVERYT---------------NSPYVKGARFYVTVGR---NQLAAKEVEIG---- 197
             +  + E +                N  Y +   +Y    +   + L  K ++I     
Sbjct: 540 IALDTLGEEHPSTAGTYGKLGGVYESNGEYDRAIEYYQKSLKIQLDTLGEKHLDIATTYN 599

Query: 198 ---RYYLKRGEYVAAIPRFQLVLANYSDA-----EHAEEAMARLVEAYVALALMDEAREV 249
              + Y  +GEY  AI  +   L  Y +       +   A   L   Y +    D A E 
Sbjct: 600 GLGQVYSSKGEYDRAIHYYHKCLQTYLETLGKKHPYTATAYNNLGLVYKSKGEHDHAVEY 659

Query: 250 VS--------LIQERYPQG 260
                      + E +P  
Sbjct: 660 FQQSLQIKLDTLGEEHPST 678


>gi|254448729|ref|ZP_05062187.1| peptidase M48, Ste24p [gamma proteobacterium HTCC5015]
 gi|198261737|gb|EDY86024.1| peptidase M48, Ste24p [gamma proteobacterium HTCC5015]
          Length = 550

 Score = 40.1 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 39/193 (20%), Positives = 68/193 (35%), Gaps = 26/193 (13%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA-RKSLLMSAFVQY 105
           + D         E Y  A L  +  N++ A ++ +          +A + + +     Q 
Sbjct: 366 FRDKSQGPLKPIERYTLAQLLTQNGNYASAQKHLDTLLEQHS-GELAFQLAQVRLDNAQ- 423

Query: 106 SAGKYQQAASLGEEYITQYPE-SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
              +YQ A    E     YP+ S  VDY+           +R     +  T L+      
Sbjct: 424 --KRYQSALKRLETLHQLYPQYSTVVDYM--------VTTLRHTQNFEAITDLLDSRYDS 473

Query: 165 IVERYTN---SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN-- 219
            V+ +       Y +  +      R+QLA     +G YY+    Y AA  + +  L +  
Sbjct: 474 GVKDWPPQWLHSYAEALKAQQLQARSQLA-----LGEYYIATARYRAAGLQIEEALDSKE 528

Query: 220 --YSDAEHAEEAM 230
                +E AE A+
Sbjct: 529 LGRQLSERAERAL 541


>gi|269119154|ref|YP_003307331.1| hypothetical protein Sterm_0526 [Sebaldella termitidis ATCC 33386]
 gi|268613032|gb|ACZ07400.1| hypothetical protein Sterm_0526 [Sebaldella termitidis ATCC 33386]
          Length = 505

 Score = 40.1 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 27/81 (33%), Gaps = 1/81 (1%)

Query: 33  CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
            F +G   +S + +      +      VY    +     N+  A + FN+      F   
Sbjct: 97  LFQLGDFSESKKIISPMLKGNEIIPEAVYLSGQIEYITGNYKGAEDLFNKLRMRN-FKDY 155

Query: 93  ARKSLLMSAFVQYSAGKYQQA 113
             K+     +  Y   ++ +A
Sbjct: 156 YLKAETGLLYTYYQTNQFNKA 176


>gi|253583598|ref|ZP_04860796.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
 gi|251834170|gb|EES62733.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
          Length = 470

 Score = 40.1 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 13/133 (9%), Positives = 44/133 (33%), Gaps = 24/133 (18%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAF-----VQYSAGKYQQA 113
                   + ++ +A  +F +    ++D+        +     +       +    YQ+A
Sbjct: 354 SDGENSFNQGSYVEALVHFEKALSINKDY--------AETKDIYFYMGQSNFQLENYQKA 405

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
               ++ +           +YY +G++Y ++           +    Y + + +++  S 
Sbjct: 406 IDNYKKALNIEKSDDKKAEIYYNMGIAYDKL--------GNKEESRNYFTFVRQKFPKSS 457

Query: 174 YVKGARFYVTVGR 186
           +   +  Y+    
Sbjct: 458 WSTKSSIYLLKLN 470


>gi|225851122|ref|YP_002731356.1| putative slei family protein [Persephonella marina EX-H1]
 gi|225645133|gb|ACO03319.1| putative slei family protein [Persephonella marina EX-H1]
          Length = 870

 Score = 40.1 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 40/209 (19%), Positives = 79/209 (37%), Gaps = 33/209 (15%)

Query: 49  DSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFP------FAGVARKSLLMSA 101
           +    ++   EVY K A +F   ++F  AY Y+ +     P           +   +  A
Sbjct: 407 EKAAALKEDPEVYRKMADIFFNRKDFKNAYRYYKKVLSLNPKMRKDILPNYIKSVKV-LA 465

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
              +    Y+++ S   EY++ YP    +            + + D+       +  + Y
Sbjct: 466 ERNFQNKNYRKSLSFYTEYLSVYPRDVKI-----------LEKVGDIYRLLGNKRTAISY 514

Query: 162 MSRIVERYTNSPYVK-GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
             ++++   N  Y        +   R       +E+G  Y   GEY  AI  ++  L  +
Sbjct: 515 YEKVMKI--NRKYFDRNLSGKLLDLR-------LEMGDIYFANGEYEKAIYHYKKALV-F 564

Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREV 249
           SD+E   E   +L +AY+ +      R++
Sbjct: 565 SDSEKLAE---KLAKAYIKMGDRYLKRKI 590



 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 3/41 (7%)

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
             Y    Y+ A      YI   P++     VYYL G  Y +
Sbjct: 796 SYYRLKDYKNAIKDFSSYIKLDPDNPE---VYYLRGKLYYE 833


>gi|156744127|ref|YP_001434256.1| hypothetical protein Rcas_4211 [Roseiflexus castenholzii DSM 13941]
 gi|156235455|gb|ABU60238.1| TPR repeat-containing protein [Roseiflexus castenholzii DSM 13941]
          Length = 522

 Score = 40.1 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 47/229 (20%), Positives = 83/229 (36%), Gaps = 39/229 (17%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLK-----EQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
           D  L+    +  Q + Y  A + +      +    +AY+   +C+R  P  G   +  L 
Sbjct: 280 DEALEEYAQIPPQDKYYVDARIRISAILKLQNKTREAYDTLFECARLHPANG---QLFLN 336

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
              + Y   K+  A    E  +   P        +YL+G  Y  M R+           L
Sbjct: 337 MGKLLYDMNKHAGAIKAFERAVQLLPNDPQ---AHYLLGFMYNLMGRE--------GWAL 385

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQ--LAAKEVE-IGRY--------------YLK 202
               + VE   ++  ++    Y+ V RN+  LAAKE   + ++              Y +
Sbjct: 386 AAWRKAVELAPDAHSLRYDLGYMYVRRNRYDLAAKEFARVLQFWPDDVETNFMLGLCYKE 445

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
             E   AIP F+ VL       H  +A+  L  +Y+ +      +  + 
Sbjct: 446 LMEPARAIPLFEKVLRRNP--RHV-QALYYLGASYLQIGNTSLGKAYLR 491


>gi|146308279|ref|YP_001188744.1| hypothetical protein Pmen_3259 [Pseudomonas mendocina ymp]
 gi|145576480|gb|ABP86012.1| hypothetical protein Pmen_3259 [Pseudomonas mendocina ymp]
          Length = 268

 Score = 40.1 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 8/56 (14%), Positives = 20/56 (35%), Gaps = 4/56 (7%)

Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
             Y +G+ Y     +    QR     L Y  +++  +  +     +   + + R +
Sbjct: 93  ALYQIGLIYMNRFNE----QRDDAKALNYFYQVLNEFPATQAASRSEARIELIRQR 144


>gi|322432943|ref|YP_004210192.1| hypothetical protein protein [Acidobacterium sp. MP5ACTX9]
 gi|321165170|gb|ADW70874.1| Tetratricopeptide TPR_1 repeat-containing protein [Acidobacterium
           sp. MP5ACTX9]
          Length = 663

 Score = 40.1 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 63/198 (31%), Gaps = 38/198 (19%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK--SLLMSAFVQYSAGKYQQAASLGEEYI 121
           A     + N  +A + + +     P    + +  + L+ A     +G   +A  L  + +
Sbjct: 75  AKTHTHQGNTLEAIKGYERAISLNPADADSIELLAKLLLA-----SGTKDEALKLYRQLL 129

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
           +  P+  +V          Y  +   + +D       L        R+ ++P       +
Sbjct: 130 SLCPDRPDV----------YFNLGHLLEFD-DDKDASLNIYREAARRFPDNPDA-----H 173

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
             + R   A             G+   AI  F+ VL    D     E    L   +  L 
Sbjct: 174 FNLARKLKAE------------GQTQQAINSFENVLLLKPD---DAETFNYLGTLFHLLG 218

Query: 242 LMDEAREVVSLIQERYPQ 259
             D+A+E   L  +  P 
Sbjct: 219 ETDKAKESYLLAIKHKPD 236


>gi|269103006|ref|ZP_06155703.1| TPR repeat-containing protein [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268162904|gb|EEZ41400.1| TPR repeat-containing protein [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 244

 Score = 40.1 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 54/154 (35%), Gaps = 22/154 (14%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
              +      +S +    + + YEKAV   LKE+++  A + FN     +P +  A  + 
Sbjct: 104 ATNTDAKENQESYSSNLDENQAYEKAVNLILKEKDYQGATKAFNDFIATYPKSVYAPNAH 163

Query: 98  LMSAFVQYSAG------KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
                + ++ G      ++  A    ++       SK  D     +G    +   +    
Sbjct: 164 YWLGQLYFAQGQMKAADEHFTAVVAAKD------SSKRAD-ALLKLGAIAQKANDNA--- 213

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
                   QY  ++V+ + +S     A+  +   
Sbjct: 214 -----KATQYYQQVVKEFPSSTTATQAQAALNKL 242



 Score = 35.9 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 42/128 (32%), Gaps = 23/128 (17%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               YQ A     ++I  YP+S      +Y +G  Y          Q   K   ++ + +
Sbjct: 135 KEKDYQGATKAFNDFIATYPKSVYAPNAHYWLGQLYFA--------QGQMKAADEHFTAV 186

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           V    +S     A   +       A K  +  +          A   +Q V+  +  +  
Sbjct: 187 VAAK-DSSKRADALLKLGAI----AQKANDNAK----------ATQYYQQVVKEFPSSTT 231

Query: 226 AEEAMARL 233
           A +A A L
Sbjct: 232 ATQAQAAL 239


>gi|296125154|ref|YP_003632406.1| Crp/Fnr family transcriptional regulator [Brachyspira murdochii DSM
           12563]
 gi|296016970|gb|ADG70207.1| putative transcriptional regulator, Crp/Fnr family [Brachyspira
           murdochii DSM 12563]
          Length = 329

 Score = 40.1 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 50/139 (35%), Gaps = 13/139 (9%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
             + S      +         VY KAV      N+  + + FN   +    A VA  S+ 
Sbjct: 192 NSEVSSAEKTAAQAQTAVNDPVYNKAVELYNSNNYVNSIKTFNTLLKS-SNAAVAENSMF 250

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV-YYL-----------VGMSYAQMIR 146
                 Y+  KY  A+++    I +YP+S NV     +L              +Y Q + 
Sbjct: 251 YMGKCYYNLNKYDNASTVLLSAIKKYPKSSNVKEAILFLAKTCEAKGDKTKAKAYYQKVI 310

Query: 147 DVPYDQRATKLMLQYMSRI 165
            +P     +K     +SR+
Sbjct: 311 SMPPMDNFSKEANASVSRL 329


>gi|51892857|ref|YP_075548.1| hypothetical protein STH1719 [Symbiobacterium thermophilum IAM
           14863]
 gi|51856546|dbj|BAD40704.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
           14863]
          Length = 422

 Score = 40.1 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 34/94 (36%), Gaps = 3/94 (3%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           LT+    A  F  G   +++  +             +  K  L LK   + +A   F + 
Sbjct: 292 LTLGNLAAALFEGGMMAEATALLDAALQKAPGDPTLLNNKGHLLLKAGQYREALACFEEA 351

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            +  P       +L   A   ++ G+Y+QA +  
Sbjct: 352 LKRAPDDP---AALANQAACYFALGRYEQALNAY 382


>gi|13473430|ref|NP_104997.1| hypothetical protein mlr4028 [Mesorhizobium loti MAFF303099]
 gi|14024179|dbj|BAB50783.1| mlr4028 [Mesorhizobium loti MAFF303099]
          Length = 558

 Score = 40.1 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 48/141 (34%), Gaps = 32/141 (22%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
            A +  +A  L    + + P        YY++G         + YD    +  L+Y +R 
Sbjct: 55  QAKRLPEAEELCLRVLARTPNHPL---AYYILG------TLGIGYD---NEKALRYFARA 102

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           V     +PY                   + +G  YLK  E+  AI   Q  L    D   
Sbjct: 103 VAEEPQNPY-----------------YHLSLGETYLKVSEFTPAIRHIQQALDLKPD--- 142

Query: 226 AEEAMARLVEAYVALALMDEA 246
             EA+  L +AY      + A
Sbjct: 143 LVEALCALGDAYNEFDKGELA 163


>gi|329954842|ref|ZP_08295859.1| tetratricopeptide repeat protein [Bacteroides clarus YIT 12056]
 gi|328526946|gb|EGF53957.1| tetratricopeptide repeat protein [Bacteroides clarus YIT 12056]
          Length = 280

 Score = 40.1 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 7/69 (10%), Positives = 17/69 (24%), Gaps = 4/69 (5%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            +        +++ A + +            A           Y      +A    E  +
Sbjct: 56  AQGDSAYMRNDYASAIQIYESLLTK---GEAAE-IYYNLGNSYYKTDDIAKAILNYERAL 111

Query: 122 TQYPESKNV 130
              P + +V
Sbjct: 112 LLQPGNADV 120


>gi|296487046|gb|DAA29159.1| peptidyl-prolyl cis-trans isomerase FKBP4 [Bos taurus]
          Length = 459

 Score = 40.1 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 14/140 (10%), Positives = 43/140 (30%), Gaps = 26/140 (18%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFA-----GVARKSL-------LMSAFVQYSAGK 109
           E+  ++ KE  + +A   + +      +        A K+        L  A        
Sbjct: 275 ERGTVYFKEGKYKQAVLQYKKIVSWLEYESSFSDEDAEKAQALRLASHLNLAMCHLKLQA 334

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           +  A     + +     ++      +  G ++   + D                ++++ Y
Sbjct: 335 FSAAIENCNKALELDSNNEKG---LFRRGEAHL-AVNDFDL-------ARADFQKVLQLY 383

Query: 170 TNSPYVKGARFYVTVGRNQL 189
            ++     A+  + V + ++
Sbjct: 384 PSNK---AAKAQLVVCQQRI 400



 Score = 35.9 bits (82), Expect = 6.7,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 32/78 (41%), Gaps = 2/78 (2%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKAYEYF 80
             L    ++A+C L      ++ +    ++  D   ++ ++ +    L   +F  A   F
Sbjct: 317 LRLASHLNLAMCHLKLQAFSAAIENCNKALELDSNNEKGLFRRGEAHLAVNDFDLARADF 376

Query: 81  NQCSRDFPFAGVARKSLL 98
            +  + +P +  A K+ L
Sbjct: 377 QKVLQLYP-SNKAAKAQL 393


>gi|291238883|ref|XP_002739355.1| PREDICTED: ribosomal protein L31-like, partial [Saccoglossus
            kowalevskii]
          Length = 2618

 Score = 40.1 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 13/91 (14%), Positives = 26/91 (28%), Gaps = 10/91 (10%)

Query: 64   AVLFLKEQNFSKAYEYFNQC-------SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
                +K++   +A E   +            P+   A +   +    Q     Y +A   
Sbjct: 1549 GKTQIKDKKHDQAIESLEKALELMKPWQDKEPWPKEAAEVQFLIGMCQMELVNYVKAFEA 1608

Query: 117  GEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
                I   P        YY  G+   ++ + 
Sbjct: 1609 FNSAIRINP---EYAEAYYQRGLVRMRLKQS 1636


>gi|281423265|ref|ZP_06254178.1| hypothetical protein HMPREF0971_00195 [Prevotella oris F0302]
 gi|281402601|gb|EFB33432.1| hypothetical protein HMPREF0971_00195 [Prevotella oris F0302]
          Length = 348

 Score = 40.1 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 44/141 (31%), Gaps = 26/141 (18%)

Query: 61  YEKAVLFLKEQNFSKAYEY-----FNQCSRDFPFAGVARKSLLMSAFVQ-YS----AGKY 110
           Y  A +  ++  +  A +             F     A K+ + S     +        +
Sbjct: 84  YRDAQVSKEQCEYEYAMKSADPAVLQAYLDTF---TDAPKAHVDSIQAHLFMLQQGDKDW 140

Query: 111 QQAA-----SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
             A      SL E YI  +P+S +     +         I  + +   +T   L   +  
Sbjct: 141 TNALVSNSKSLFEAYIANHPDSPHKAEAEH--------KIDSIDWATVSTTNTLDAYNTY 192

Query: 166 VERYTNSPYVKGARFYVTVGR 186
           ++ + N  +V  A+  +    
Sbjct: 193 LQDHPNGEHVDEAKDGIKSLN 213


>gi|218437189|ref|YP_002375518.1| hypothetical protein PCC7424_0180 [Cyanothece sp. PCC 7424]
 gi|218169917|gb|ACK68650.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424]
          Length = 178

 Score = 40.1 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 53/141 (37%), Gaps = 16/141 (11%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKY 110
           +    ++ YE   L+L ++ + ++   F +  +         K+L+     +  Y+  +Y
Sbjct: 50  EKGTAKDYYELGSLYLDKKLYVQSINLFQKALKADNEVEPENKALVYNALGYAYYAQEQY 109

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           + A    +E I  YPE        Y++ ++      +V   ++ T   L+     ++   
Sbjct: 110 EIAIRNYKEAIKLYPE--------YVIALNNLA---NVYAKKQMTAKALETYEETLKIDP 158

Query: 171 NSPYVKGARFYVTVGRNQLAA 191
           N+     A+      R +   
Sbjct: 159 NN---SIAKRRAESLRKRFVE 176


>gi|168704998|ref|ZP_02737275.1| possible protein kinase [Gemmata obscuriglobus UQM 2246]
          Length = 963

 Score = 40.1 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 23/187 (12%), Positives = 53/187 (28%), Gaps = 21/187 (11%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FA 90
              +     +  R   L +   V   R  + +A   L+   ++ A         + P   
Sbjct: 584 AALIAPRVGEEVRTADLPAPLAVSGTRGAFLEAAFALRVGRYATAVPLLEALVGEQPAHG 643

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
                +    A+  +  G Y +A    +      P+        +  G+ Y    +    
Sbjct: 644 A----AQFCLAYSLHQQGHYARALERYDVARALLPKDPR---PLFGRGLIYGLRTK---- 692

Query: 151 DQRATKLMLQYMSRIVERYTNS--PYVKGARFYVTVGR--NQLAAKEVEI-GRYYLKRGE 205
                +L     ++ +         Y         + +     A+K   +  ++     +
Sbjct: 693 ----PELAEAEFTKALALDPGHAESYRNRGLVRFRLAKRDEPFASKAAAVRAKFEESVAD 748

Query: 206 YVAAIPR 212
           Y AA+ R
Sbjct: 749 YTAALDR 755


>gi|254229658|ref|ZP_04923069.1| tetratricopeptide repeat domain protein [Vibrio sp. Ex25]
 gi|151937857|gb|EDN56704.1| tetratricopeptide repeat domain protein [Vibrio sp. Ex25]
          Length = 287

 Score = 40.1 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 24/184 (13%), Positives = 56/184 (30%), Gaps = 30/184 (16%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A  ++      +A + F Q   +  +   A +  L++ +      ++++A     +    
Sbjct: 10  AKDYMVSGFLDRAEKIFEQLVEEPDYKEAALQ-QLVTIY--QQTREWEKAIYYANQLAKL 66

Query: 124 YPESKNVDYVYYLVG-MSYA-QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              +K       +   +++    I  +      T   +Q+  + +           A   
Sbjct: 67  --GNKRSR----MRANIAHFWCEIAMLDQADGNTNKAIQHFKKALAEDPKCVRASIALGR 120

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
           +                 YL+  +Y   I     VL    D +   + +  + E Y  L 
Sbjct: 121 I-----------------YLESEDYKHTIKYLTGVLE--QDKDFISDVLPTIAECYHHLG 161

Query: 242 LMDE 245
             DE
Sbjct: 162 QEDE 165


>gi|330506551|ref|YP_004382979.1| TPR-repeat-containing protein [Methanosaeta concilii GP-6]
 gi|328927359|gb|AEB67161.1| TPR-repeat protein [Methanosaeta concilii GP-6]
          Length = 261

 Score = 40.1 bits (93), Expect = 0.33,   Method: Composition-based stats.
 Identities = 40/255 (15%), Positives = 77/255 (30%), Gaps = 68/255 (26%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV----------------- 92
             T      E  E+      + ++ +A E +++  R  P   V                 
Sbjct: 17  PSTCQENAEEWLERGNELFSQGDYEEAIEAYDEALRLDPENPVAWSNKGTALINQRRYEE 76

Query: 93  ARKS---------LLMSAFVQ-----YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
           A ++          L SA+       +  G+Y +A    ++ I   PE+ ++   + L G
Sbjct: 77  AIQAFDEVIRIDPELASAWSYKGGALHELGEYDEAIVALDQAIGLEPENGSI---WSLKG 133

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
            +           Q      L  +   +    +S      +  +                
Sbjct: 134 SALYF--------QGEYDEALTAIEEAIRLEPDSTIAWSLKADILY-------------- 171

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHA----EEAMARLVEAYVALALMDEAREVVSLIQ 254
              ++G+Y  AI     V+    D   A     E + RL     +L  +D A ++ S + 
Sbjct: 172 ---EQGDYQEAITAVDEVIRLMPDYPAAWSNRGELLWRLERYDESLEALDRAIQLDSDLA 228

Query: 255 ERYPQGYWARYVETL 269
           +      W    E L
Sbjct: 229 D-----AWYNRGEAL 238


>gi|322492931|emb|CBZ28212.1| putative intraflagellar transport protein IFT88 [Leishmania
           mexicana MHOM/GT/2001/U1103]
          Length = 811

 Score = 40.1 bits (93), Expect = 0.33,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 62/219 (28%), Gaps = 48/219 (21%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY-- 110
           +      +Y   +   K   + +A   F +            ++L+ S+ V Y       
Sbjct: 507 EADNVEAIYNLGLAAKKLGLYEEAVRMFKRV-----------QALVDSSEVLYQIADLSD 555

Query: 111 ----QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
                 A       I + P   N       +G  YA+   DV            Y     
Sbjct: 556 LVGDPSALEWFNRLIGRVPTDPN---ALARIGSLYARDGDDV--------QAFHYYLEAY 604

Query: 167 ERY--------------TNSPYVKGARF---YVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
             Y                +     A       +  + Q    ++ +   + +RG+Y  A
Sbjct: 605 RYYQVNMDVISWLGAYFVKNEVYDKAVQFFERASHIQPQEVKWQLMVASCHRRRGDYAQA 664

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
              ++ V   Y D     E +  LV+      L +EA E
Sbjct: 665 KLLYEQVHRKYPD---NIECLNYLVQLCKDAGLNEEANE 700



 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 69/208 (33%), Gaps = 43/208 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFN---QCSR-----DFPFAGVARKSLLMSAFV-------QYS 106
           E A+L L+ +++  A E      +  R        +  +A +  +   +        QY 
Sbjct: 144 ESAMLALQ-KDYGAALEKAKDAGKLERSLCKKREQYG-LAEQINVDLTYAVHFNLAVQYQ 201

Query: 107 AGK-YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
             + Y +A +     I           V +         + ++   Q+   L ++   ++
Sbjct: 202 NHQLYTEALNTYNLIIRN---------VQFPQAGRLRVNMGNIYLAQQNYLLAIKMYRKV 252

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           ++         G      + RN        I   ++K G+Y  A   ++ V+    DA  
Sbjct: 253 LDETP----TAGKELRYHLCRN--------IANAFVKLGQYRDAANSYETVVEGNGDANA 300

Query: 226 AEEAMARLVEAYVALALMDEAREVVSLI 253
                  L+  Y AL   ++ +   + +
Sbjct: 301 T----FNLILCYYALGETEKMKRTFTRL 324


>gi|118085018|ref|XP_417145.2| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 821

 Score = 40.1 bits (93), Expect = 0.33,   Method: Composition-based stats.
 Identities = 35/283 (12%), Positives = 78/283 (27%), Gaps = 56/283 (19%)

Query: 6   GRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAV 65
              + +FE    ++   A T    +   +L     Q++    L   +D      +  K  
Sbjct: 436 LETLKMFEKKDSRVKSAAATNLSFLY--YLENELAQATNYADLAVSSDRYNPAALTNKGN 493

Query: 66  LFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
                 ++ KA E++      D         +L           +  +A      ++  +
Sbjct: 494 TVFANGDYEKAAEFYKEALRNDCSCTE----ALYNLGLTYKKLNRIDEALDC---FLKLH 546

Query: 125 PESKNVDYVYYLVGMSY-------------AQMIRDVPYDQ-------------RATKLM 158
               N   V + +   Y              Q+I  VP D                    
Sbjct: 547 AILGNSAQVLHQIADIYEIMEDPNQAIEWLMQLISVVPTDPHVLTKLGKLYDNEGDKSQA 606

Query: 159 LQYMSRIVERYT--------------NSPYVKGARFYVTVGRNQL---AAKEVEIGRYYL 201
             Y       +               ++ + + A  Y       L      ++ +   Y 
Sbjct: 607 FHYYYESYRYFPSNIEVIEWLGAYCIDTQFCEKAIEYFERAALILPTQVKWQLMVASCYR 666

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
           + G Y  A+ +++++   + +     E +  LV     + L +
Sbjct: 667 RSGNYQKALEKYKVIHQKFPE---NVECLRFLVRLCTDMGLKE 706


>gi|113476830|ref|YP_722891.1| hypothetical protein Tery_3314 [Trichodesmium erythraeum IMS101]
 gi|110167878|gb|ABG52418.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101]
          Length = 1240

 Score = 40.1 bits (93), Expect = 0.33,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 56/195 (28%), Gaps = 68/195 (34%)

Query: 71   QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ-------YSAGKYQQAASLGEEYITQ 123
            +++  A E F              ++               Y   ++  A +   E I  
Sbjct: 1101 KDYKLAIEDFTTV----------IQANPKDVDAYNYRGICLYEIQEFYGAIADFTEAIKI 1150

Query: 124  YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
             P+  N    YY   +S  ++  +        +  +   +  ++                
Sbjct: 1151 NPKDANT---YYHRAISNYKIGDN--------QQAIDDCTEAIKLEPTD----------- 1188

Query: 184  VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA---YVAL 240
                          RYY  R     A+ R+        D E  +  +  L +A   Y   
Sbjct: 1189 -------------ARYYRNR-----AMLRY--------DTEDNQGGLDDLQKAADIYQKQ 1222

Query: 241  ALMDEAREVVSLIQE 255
               D+ +EV+ ++++
Sbjct: 1223 GQNDDYQEVIKMMRK 1237



 Score = 39.7 bits (92), Expect = 0.41,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 48/142 (33%), Gaps = 21/142 (14%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLG 117
           +YE+A+   +  N+  A   +++          +  + L       ++    YQ A S  
Sbjct: 16  IYERAIANYQLANYQDAIADYSRVIEI-----KSSNAELYYSRGVAKHQMEDYQGAISDY 70

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
            E I   P + +   VY   G++ +Q+ R         +  L  ++  +    N      
Sbjct: 71  TEAIKIDPNNSS---VYNNRGIALSQIGR--------YQDALTDVTEALRLNPND---AD 116

Query: 178 ARFYVTVGRNQLAAKEVEIGRY 199
           + +         +  E  I  Y
Sbjct: 117 SYYNRGFVYEATSDYEKAIADY 138


>gi|46202722|ref|ZP_00052716.2| COG0457: FOG: TPR repeat [Magnetospirillum magnetotacticum MS-1]
          Length = 344

 Score = 40.1 bits (93), Expect = 0.33,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 26/69 (37%), Gaps = 3/69 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++ + V  L++  + +A   F   +        A + L        S GK  +AA     
Sbjct: 8   IFRQGVGALQQGQWDEAARQFRTLTTR---TPNAPEPLYYLGVALLSGGKPDEAAEALTR 64

Query: 120 YITQYPESK 128
            I ++ ++ 
Sbjct: 65  LIRKHGDNP 73


>gi|149375713|ref|ZP_01893482.1| hypothetical protein MDG893_18547 [Marinobacter algicola DG893]
 gi|149360115|gb|EDM48570.1| hypothetical protein MDG893_18547 [Marinobacter algicola DG893]
          Length = 438

 Score = 40.1 bits (93), Expect = 0.33,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 43/141 (30%), Gaps = 25/141 (17%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           +  LTI   + +       ++ + +            + ++   +   K  +  +A    
Sbjct: 2   RRLLTIALMLCLALSTAHAQEETSE-----------AKALFRAGIQAFKAGDMDEARRLL 50

Query: 81  NQCSRDFPFAGVARKSL-LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
                     G++ +SL      V Y  G Y+ A      + T  P  +     YY +G+
Sbjct: 51  ESAVSK----GLSSRSLNYNLGVVYYKLGLYEDAEQT---FRTLIPTRQKA-LAYYNIGL 102

Query: 140 SYAQMIRDVPYDQRATKLMLQ 160
           +           Q A     Q
Sbjct: 103 TALAREN-----QDAATEAFQ 118


>gi|94269907|ref|ZP_01291596.1| Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1]
 gi|93451021|gb|EAT01988.1| Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1]
          Length = 609

 Score = 40.1 bits (93), Expect = 0.33,   Method: Composition-based stats.
 Identities = 24/178 (13%), Positives = 59/178 (33%), Gaps = 24/178 (13%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           ++ +    + + + ++P +    ++ L      +     ++A +    +  +YP+S  + 
Sbjct: 18  DWQRVRNLYRRYTVEYPDSHRREQAYLELGLAHFQMRFLREALTYFRLFEQRYPDSPLLP 77

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
              Y    S  +          A    L+ + ++V+   +      A   +         
Sbjct: 78  RARYWQARSMVE--------VGALAEALEILEQLVDE-PDEELAFDAMEAM--------- 119

Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA-EEAMARLVEAYVALALMDEARE 248
                 R +  +GE+  AI  +  +            E +  L   Y A+   +E RE
Sbjct: 120 -----ARTFTLKGEHREAIATYHEMFRRQPLLRFMDPEKLLDLGLGYFAIGWEEEGRE 172


>gi|268574572|ref|XP_002642265.1| Hypothetical protein CBG18253 [Caenorhabditis briggsae]
          Length = 414

 Score = 40.1 bits (93), Expect = 0.33,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 38/99 (38%), Gaps = 13/99 (13%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
           AV   +G   ++  D  ++  ++ R       KA   L   +F  A  +F       P +
Sbjct: 95  AVALPMGDSNKAPSDEDVEKASEERG------KAQEALGNGDFDAALTHFTAAIEANPGS 148

Query: 91  G--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
               A+++ ++         +   A +  ++ I+  P+S
Sbjct: 149 AMLHAKRASVLL-----KLKRPIAAIADCDKAISINPDS 182


>gi|71415447|ref|XP_809790.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70874225|gb|EAN87939.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 414

 Score = 40.1 bits (93), Expect = 0.33,   Method: Composition-based stats.
 Identities = 17/146 (11%), Positives = 42/146 (28%), Gaps = 23/146 (15%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ-CS---RDFPFAGVARK 95
           +   +    ++        E+  K    +    + +A  Y+ +       +  F   A +
Sbjct: 122 KAKQKFEMRNNPYQGMSAEEIKNKGNELMGMAKYKEAIAYYTKSIEMEPENHVF--FANR 179

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +             Y  A    E  I   P         Y     Y+++   + Y ++  
Sbjct: 180 AA-----AHTHLKDYDSAVIDCERAIAINPN--------YSKA--YSRLGTSLFYQEKYA 224

Query: 156 KLMLQYMSRIVERYT-NSPYVKGARF 180
           +  +   ++  E    N  Y +  + 
Sbjct: 225 R-AVDAFAKASELDPTNDRYKEDLKQ 249


>gi|186686367|ref|YP_001869563.1| TPR repeat-containing serine/threonin protein kinase [Nostoc
           punctiforme PCC 73102]
 gi|186468819|gb|ACC84620.1| serine/threonine protein kinase with TPR repeats [Nostoc
           punctiforme PCC 73102]
          Length = 709

 Score = 40.1 bits (93), Expect = 0.33,   Method: Composition-based stats.
 Identities = 23/149 (15%), Positives = 57/149 (38%), Gaps = 20/149 (13%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
              Y +  + +    L  + + +A E FNQ  +  P +    ++     +  +   +Y++
Sbjct: 530 KSSYYQAWFSRGNTLLNLRRYPEAIESFNQVIKYNPNSY---QAWFNLGWSLHQNQRYEE 586

Query: 113 AASLGEEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           A     +  T     K+ DY ++Y +G S   + +         +  +   ++ V    +
Sbjct: 587 AIKSYNKAATL----KSKDYQLWYNLGNSQYILQK--------YEDAIASYNKAVRYKPD 634

Query: 172 ---SPYVK-GARFYVTVGRNQLAAKEVEI 196
              S Y +  A   +   ++ +A+ +  I
Sbjct: 635 HSESWYSRGNALLNLKRFQDAIASYDRAI 663



 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 14/118 (11%), Positives = 36/118 (30%), Gaps = 26/118 (22%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+K +       + +A   + +     P      ++         +   YQ A +  +  
Sbjct: 470 YKKGLALQNSNRYEEAIAAYQKVVDLKP--DY-EQAWYNLGNALVNLQHYQDAFNAYD-- 524

Query: 121 ITQYPESKNVDY------VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
                  K V Y       ++  G +   + R            ++  +++++   NS
Sbjct: 525 -------KAVQYKSSYYQAWFSRGNTLLNLRRYP--------EAIESFNQVIKYNPNS 567



 Score = 35.5 bits (81), Expect = 8.1,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 54/170 (31%), Gaps = 41/170 (24%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
            K   F     + +A + + +      D  +    +K L        ++ +Y++A +  +
Sbjct: 437 AKGEAFSNLNQYDQAIKAYEKAIELKSDN-YEAWYKKGL-----ALQNSNRYEEAIAAYQ 490

Query: 119 EYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
           + +   P     DY   +Y +G +   +        +  +       + V+    S Y +
Sbjct: 491 KVVDLKP-----DYEQAWYNLGNALVNL--------QHYQDAFNAYDKAVQY--KSSYYQ 535

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
                     N             L+R  Y  AI  F  V+    ++  A
Sbjct: 536 AWFSRGNTLLN-------------LRR--YPEAIESFNQVIKYNPNSYQA 570


>gi|331268455|ref|YP_004394947.1| TPR-repeat-containing protein [Clostridium botulinum BKT015925]
 gi|329125005|gb|AEB74950.1| TPR-repeat-containing protein [Clostridium botulinum BKT015925]
          Length = 413

 Score = 40.1 bits (93), Expect = 0.33,   Method: Composition-based stats.
 Identities = 20/150 (13%), Positives = 47/150 (31%), Gaps = 21/150 (14%)

Query: 35  LVGWERQSSRDVYLDSVTDVRYQREV---YEKAVLFLKEQN-FSKAYEYFNQC----SRD 86
           L G    ++    L    D+   + V   Y      ++  + +  A +   +        
Sbjct: 268 LKGKRLDTNEKTTLSRAEDILKDQGVKYFYNTGRECVEANDKWDMAIDNLTKAYDYGKDS 327

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
           + +  +    L M      +    ++A     EY  +YP    +  V Y   + Y  +  
Sbjct: 328 YLYGHI----LFMLGVSYQNKQDVKEALKYYTEYDEKYPNENYIQEVLYRTAILYKNVDL 383

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
           +            +Y  ++++ Y +  Y  
Sbjct: 384 N---------KAKEYGQKLLKNYPDCEYSN 404



 Score = 35.5 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 26/64 (40%), Gaps = 1/64 (1%)

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           Y  + +   A+  +      Y +  + +E + R    Y  + L  +A+E    + + YP 
Sbjct: 341 YQNKQDVKEALKYYTEYDEKYPNENYIQEVLYRTAILYKNVDLN-KAKEYGQKLLKNYPD 399

Query: 260 GYWA 263
             ++
Sbjct: 400 CEYS 403


>gi|283832922|ref|ZP_06352663.1| tetratricopeptide repeat protein [Citrobacter youngae ATCC 29220]
 gi|291071527|gb|EFE09636.1| tetratricopeptide repeat protein [Citrobacter youngae ATCC 29220]
          Length = 389

 Score = 40.1 bits (93), Expect = 0.33,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 68/189 (35%), Gaps = 30/189 (15%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              ++    + +A + FNQ + +  F   A +  L+  +   +  ++Q+A  + E  +  
Sbjct: 114 GRDYMAAGLYDRAEDMFNQLTDETDFRVGALQ-QLLQIY--QATSEWQKAIDVAERLVKL 170

Query: 124 YPESKNVDYVYYLVGMSYAQM-IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
             + + ++  ++   ++  QM   D+       K              NS          
Sbjct: 171 GKDKQRIEIAHFYCELALQQMANDDMDRAMTLLKKGAAADK-------NS---------- 213

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
                  A   + +GR Y+  G+Y  A+   Q V++   D E   E +  L   Y  L  
Sbjct: 214 -------ARVSIMMGRVYMLNGDYAKAVESLQRVIS--QDKELVSETLEMLQSCYQHLGK 264

Query: 243 MDEAREVVS 251
            DE  E + 
Sbjct: 265 NDEWAEFLR 273


>gi|118346379|ref|XP_977151.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89288435|gb|EAR86423.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 614

 Score = 40.1 bits (93), Expect = 0.33,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 50/152 (32%), Gaps = 33/152 (21%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           YS  +++++  + +E I   P S        L+G +Y +  +            + Y ++
Sbjct: 307 YSNEQFEESIEVLKEAIQINPSSYQS---LNLIGNNYFENNK--------YNEAINYFTQ 355

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
            +  +  +P               +A K   IG  YL   +Y  AI      +    +  
Sbjct: 356 SINVFPENP---------------IAYK--SIGHSYLNLKQYETAIENLNKAVMYNPEYS 398

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQER 256
           HA      L   Y  +     A    S I+  
Sbjct: 399 HAY---NLLGVCYHNIGDTQNA--AESYIKAN 425



 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 31/80 (38%), Gaps = 6/80 (7%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              + +   +++A  YF Q    FP   +A KS         +  +Y+ A     + +  
Sbjct: 337 GNNYFENNKYNEAINYFTQSINVFPENPIAYKS---IGHSYLNLKQYETAIENLNKAVMY 393

Query: 124 YPESKNVDYVYYLVGMSYAQ 143
            PE  +    Y L+G+ Y  
Sbjct: 394 NPEYSH---AYNLLGVCYHN 410


>gi|114562407|ref|YP_749920.1| TPR repeat-containing protein [Shewanella frigidimarina NCIMB 400]
 gi|114333700|gb|ABI71082.1| Tetratricopeptide TPR_2 repeat protein [Shewanella frigidimarina
           NCIMB 400]
          Length = 1016

 Score = 40.1 bits (93), Expect = 0.33,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 33/108 (30%), Gaps = 14/108 (12%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           Q+  +  +  +    +RY N  +       +T     LA  ++              A  
Sbjct: 715 QQRWQEAVDVLKPFQQRYPNHEFSAIIPAKLTQSYEALAQWDL--------------AAE 760

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           +  +++ N        EA+    E Y+       A        + YPQ
Sbjct: 761 QLLIIVTNEKPGPLKREALYTAAEYYLKAGDNSNALSTFRTYAKTYPQ 808



 Score = 35.5 bits (81), Expect = 8.8,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 44/136 (32%), Gaps = 22/136 (16%)

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
            +  ++ + +YP+    +++ Y +  +           Q      L  +  ++  Y  + 
Sbjct: 130 VNEYQQLLQRYPQRSENEHIQYQLAKALDL--------QGKLDASLAEVESLLRHYPQTM 181

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
           Y+    F                   Y     Y AAI  +Q VL    + ++   ++  L
Sbjct: 182 YLAELNFRRGEI--------------YYNLQNYSAAITAYQQVLTANDNQKYQLNSLYML 227

Query: 234 VEAYVALALMDEAREV 249
             +   L  +  A + 
Sbjct: 228 GWSEFKLNRLANADKA 243


>gi|114706795|ref|ZP_01439695.1| hypothetical protein FP2506_18304 [Fulvimarina pelagi HTCC2506]
 gi|114537743|gb|EAU40867.1| hypothetical protein FP2506_18304 [Fulvimarina pelagi HTCC2506]
          Length = 304

 Score = 40.1 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 44/141 (31%), Gaps = 16/141 (11%)

Query: 36  VGWERQSSRDVYLDSVTDVRY--QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
                +S++    +            VY++A   L   +++ A + F Q  + +P A  A
Sbjct: 157 GAASGESTQPAAPNQPVAAPSGGSSAVYDQAYDQLLAGDYASAEQSFRQYVQTYPDAADA 216

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYI---TQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
             +        +    Y  A    E ++      P +     +   +GMS A +      
Sbjct: 217 SDAQYWLGESLFQQQLYADA---AEVFLNAQKDNPAADKAPDMMLKLGMSLAAL------ 267

Query: 151 DQRATKLMLQYMSRIVERYTN 171
                +        + +RY  
Sbjct: 268 --GNQETACITYREVADRYPQ 286



 Score = 39.3 bits (91), Expect = 0.50,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 40/127 (31%), Gaps = 22/127 (17%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           ++   A+ Q  AG Y  A     +Y+  YP++ +     Y +G S  Q        Q+  
Sbjct: 182 AVYDQAYDQLLAGDYASAEQSFRQYVQTYPDAADASDAQYWLGESLFQ--------QQLY 233

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
               +      +   ++P    A   +      LAA            G    A   ++ 
Sbjct: 234 ADAAEVFLNAQK---DNPAADKAPDMMLKLGMSLAA-----------LGNQETACITYRE 279

Query: 216 VLANYSD 222
           V   Y  
Sbjct: 280 VADRYPQ 286


>gi|311113427|ref|YP_003984649.1| hypothetical protein HMPREF0733_11758 [Rothia dentocariosa ATCC
           17931]
 gi|310944921|gb|ADP41215.1| conserved hypothetical protein [Rothia dentocariosa ATCC 17931]
          Length = 792

 Score = 40.1 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 16/113 (14%), Positives = 40/113 (35%), Gaps = 17/113 (15%)

Query: 59  EVYEKAVLFL-----KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
           + Y  A L L      +    +A   ++    +      A  + L      +  G+ +QA
Sbjct: 226 QAYASAQLGLGNAYKDQGKLDEAITTWSNIHHNDNPQAYAW-AQLGLGVAYHDQGEPEQA 284

Query: 114 ASLGEEYITQYPESKNV-DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
            +   +   ++ +      +  Y +G++Y        +DQ   +  +   S++
Sbjct: 285 IAAWSK--VRHSDDPKAYAWAQYSLGVAY--------HDQGEPEQAIAAWSKV 327


>gi|124024107|ref|YP_001018414.1| hypothetical protein P9303_24161 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964393|gb|ABM79149.1| Hypothetical protein P9303_24161 [Prochlorococcus marinus str. MIT
           9303]
          Length = 661

 Score = 40.1 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 57/184 (30%), Gaps = 45/184 (24%)

Query: 60  VYEKAVLFLKEQNFSKAYEYF-NQCSR-DFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            Y    L + ++ + +A         R    F+     S        +    +  A   G
Sbjct: 114 YYNLGKLLVADKQYGRAIPVLKEALKRDQKSFSAWNLLSK-----ASFHDEDFAGAVDSG 168

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           +      P++     V++ +G+ Y   ++ +          +    + +    +  Y+  
Sbjct: 169 QRACELSPDNPE---VFFDLGV-YFNALKQLD-------KAVNAYQKAIVFKPD--YL-E 214

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           A   +    N L            K+G+   AI  FQ V+    D          LV+AY
Sbjct: 215 AWVNMG---NIL-----------TKQGKLEGAIRCFQKVIDLNPD----------LVDAY 250

Query: 238 VALA 241
             + 
Sbjct: 251 FNMG 254


>gi|91205042|ref|YP_537397.1| hypothetical protein RBE_0227 [Rickettsia bellii RML369-C]
 gi|91068586|gb|ABE04308.1| unknown [Rickettsia bellii RML369-C]
          Length = 250

 Score = 40.1 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 17/143 (11%), Positives = 43/143 (30%), Gaps = 15/143 (10%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
               +   DV   ++ Y+ A+   K+     A   F    + +P + +   +        
Sbjct: 107 KTAPEPNKDVAPDKQAYDLALASYKDNKTDDAKNKFKNFIQKYPKSSMISNAYFWYGECF 166

Query: 105 YSAGKYQQAASLGEEYITQY---PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           +    Y  AA     Y+  Y   P+          + +S  ++        + T      
Sbjct: 167 FKQKDYNTAAVN---YLKGYKESPKGAKSSDALLKLALSLGEL--------KKTTEACNI 215

Query: 162 MSRIVERYTNSPYVKGARFYVTV 184
           + ++ + +  +     A   +  
Sbjct: 216 LDKLNKEFPGNNRTA-ASKKMAE 237



 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 44/131 (33%), Gaps = 30/131 (22%)

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
           Y + ++  +  +        T          +++Y  S  +  A F+             
Sbjct: 123 YDLALASYKDNK--------TDDAKNKFKNFIQKYPKSSMISNAYFWYGEC--------- 165

Query: 195 EIGRYYLKRGEY-VAAIPRFQLVLANYSDAE---HAEEAMARLVEAYVALALMDEAREVV 250
                + K+ +Y  AA+      L  Y ++     + +A+ +L  +   L    EA  ++
Sbjct: 166 -----FFKQKDYNTAAVNY----LKGYKESPKGAKSSDALLKLALSLGELKKTTEACNIL 216

Query: 251 SLIQERYPQGY 261
             + + +P   
Sbjct: 217 DKLNKEFPGNN 227


>gi|45384146|ref|NP_990431.1| cartilage-associated protein precursor [Gallus gallus]
 gi|3182990|sp|Q90830|CRTAP_CHICK RecName: Full=Cartilage-associated protein; AltName: Full=Dualin;
           Flags: Precursor
 gi|1296526|emb|CAA66206.1| cartilage associated protein [Gallus gallus]
          Length = 271

 Score = 40.1 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 26/72 (36%), Gaps = 13/72 (18%)

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           E   +  R  P+    +       F  + A    +A +    ++ ++P+ + +       
Sbjct: 127 ELLEEFQRREPY-KYLQ-------FAYFKANNLPKAIAAAHTFLLKHPDDEMM-----QR 173

Query: 138 GMSYAQMIRDVP 149
            M+Y + I D  
Sbjct: 174 NMAYYKSIPDAE 185


>gi|27375838|ref|NP_767367.1| hypothetical protein blr0727 [Bradyrhizobium japonicum USDA 110]
 gi|27348976|dbj|BAC45992.1| blr0727 [Bradyrhizobium japonicum USDA 110]
          Length = 370

 Score = 40.1 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 40/133 (30%), Gaps = 17/133 (12%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y +AV+ +K+ +   A   F++ +R  P F     K+ L  A   +  G  + A +  +E
Sbjct: 224 YCRAVVLVKKDDPDGAIREFDEVTRIAPAF----VKAYLARAVAWHKKGDDKHAIADFDE 279

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            I   P +                       D       L   +  +     +  V  A 
Sbjct: 280 AIRLQPGNSTA-----------YNNRAAAFRDMGQHDRALADYNEALRLDPKNQDVL-AN 327

Query: 180 FYVTVGRNQLAAK 192
             +       A  
Sbjct: 328 RGLLYMMMSDAKH 340



 Score = 36.2 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 31/111 (27%), Gaps = 13/111 (11%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            +A  +   ++F  A   F +     P       + +M      + G    A +   E +
Sbjct: 122 SRAQEYFNRRDFDLAIAGFTEAIERNPKQAY--FATVMRGEAYAAKGDTDHAVADYTEAM 179

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
            + P      + Y L    +         D+      L   +  V     S
Sbjct: 180 QRNPA---AAWPYELRSAVHF--------DKGEIDEALDDCNSAVRLEPGS 219


>gi|301062314|ref|ZP_07202978.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
 gi|300443579|gb|EFK07680.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
          Length = 474

 Score = 40.1 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 42/124 (33%), Gaps = 16/124 (12%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAF 102
           +D       D       Y + V++ +++ ++ A + F       P F      +      
Sbjct: 353 KDFTQAINIDSENAEAYYNRGVVYARKKQYNMAIQDFQTVIGLNPAF----EDAYCNRGN 408

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
           V Y+  KY  A     + +   PE  +   VY+  G+SY  + ++               
Sbjct: 409 VYYALKKYHLAVQDYHKALEIDPEDGD---VYFNRGLSYLALGQE--------NRAFADF 457

Query: 163 SRIV 166
            + V
Sbjct: 458 KKAV 461


>gi|295131940|ref|YP_003582616.1| hypothetical protein ZPR_0057 [Zunongwangia profunda SM-A87]
 gi|294979955|gb|ADF50420.1| protein containing tetratricopeptide region [Zunongwangia profunda
           SM-A87]
          Length = 844

 Score = 40.1 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 34/70 (48%)

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           Y  K GEY  A+ R + VLA+  +      +   L +AY  L ++++   + + I   YP
Sbjct: 562 YNEKFGEYQLAVDRLEQVLASNPEDRLILPSKYNLYKAYGRLNMLNQQDRMKNDIISNYP 621

Query: 259 QGYWARYVET 268
              +A +++ 
Sbjct: 622 NSQYAVFIQN 631


>gi|153825278|ref|ZP_01977945.1| GGDEF family protein [Vibrio cholerae MZO-2]
 gi|149741106|gb|EDM55165.1| GGDEF family protein [Vibrio cholerae MZO-2]
          Length = 667

 Score = 40.1 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 72/212 (33%), Gaps = 32/212 (15%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQ-CSRDFPFAG--VARKSLLMS 100
           D+ L  + D      +Y    L +     +  A +Y N+            +  +     
Sbjct: 215 DLLLSLLPDYVDPSGIYNDVGLLMGTLGQYESALDYLNKALEYRLEQGNPLLIAQVEHSL 274

Query: 101 AFVQYSAGKYQQAASLGEEYITQY--PES--KNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
               +  G+Y+++    E+    +  P +    + YV+  +G +Y ++   V  DQ    
Sbjct: 275 GDTYFKQGRYEESILYFEQ-AKAHLTPANYLFGLAYVHLGLGKAYIELNNFVEGDQ-HLF 332

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             L+Y++          +       +      LA        +  K  +Y  AI      
Sbjct: 333 QALEYVN---------QHKDQHLQGLIYL--SLAQ-----AHF--KEQKYAQAINYANQA 374

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           +A  S++           +AY+ LA + EA +
Sbjct: 375 VA-ISESASLPR---IKAQAYLQLAKIAEAEQ 402


>gi|326798548|ref|YP_004316367.1| hypothetical protein Sph21_1128 [Sphingobacterium sp. 21]
 gi|326549312|gb|ADZ77697.1| TPR repeat-containing protein [Sphingobacterium sp. 21]
          Length = 280

 Score = 40.1 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 26/58 (44%), Gaps = 4/58 (6%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
           + +G + ++  ++  A+ RF+ V+     A    EA   L  +Y  + L  EA +   
Sbjct: 203 MSLGMFSMRSRQFDKAVNRFKTVIEIQPSA----EAWFYLATSYENIGLKAEAIKAFQ 256


>gi|219848611|ref|YP_002463044.1| Lytic transglycosylase catalytic [Chloroflexus aggregans DSM 9485]
 gi|219542870|gb|ACL24608.1| Lytic transglycosylase catalytic [Chloroflexus aggregans DSM 9485]
          Length = 782

 Score = 40.1 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 34/89 (38%), Gaps = 15/89 (16%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
             Q++S +++ +  +P    AR              + + R Y KRG + +A    + +L
Sbjct: 74  AAQFLSELLQLFPAAPEAPQAR--------------LLLARSYAKRGAWTSAAAVLRPLL 119

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEA 246
           ++         A+     A  A  L + A
Sbjct: 120 SD-PTQPIYVPALFLNARANEAAGLHEAA 147



 Score = 39.3 bits (91), Expect = 0.62,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 40/103 (38%), Gaps = 10/103 (9%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQR----------EVYEKAVLFLKEQN 72
           A+T    I  C+LV     S +     + T                +++++A+      +
Sbjct: 11  AVTWICGIMCCWLVACTTPSFQPSPDPTATPTELPATPTPLPITSTDLWQRAIAASVIGD 70

Query: 73  FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
              A ++ ++  + FP A  A ++ L+ A      G +  AA+
Sbjct: 71  EDTAAQFLSELLQLFPAAPEAPQARLLLARSYAKRGAWTSAAA 113


>gi|325959182|ref|YP_004290648.1| hypothetical protein Metbo_1438 [Methanobacterium sp. AL-21]
 gi|325330614|gb|ADZ09676.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
           sp. AL-21]
          Length = 167

 Score = 40.1 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 22/163 (13%), Positives = 58/163 (35%), Gaps = 41/163 (25%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLL------------ 98
           D +    +Y++A+ ++++ +   A E+FN+     P ++     K ++            
Sbjct: 2   DEQDVEVLYKQALSYMEQGDKQMAIEFFNKAIAMDPNYSPAWNDKGIVHMELKEFDEAFK 61

Query: 99  -----------------MSAFVQYSAGKYQQAASLGEEYITQYPE--SKNVDYVYYLVGM 139
                               +V     KY+ A    + ++ +YP+  ++   Y  YL   
Sbjct: 62  CFDTAMRIDSSNSMPVYNMGYVLLMQEKYEDAVHAFDMFLERYPDEKNEFYKYGLYLKAE 121

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
           ++ ++ +   YDQ         + + ++R       +     +
Sbjct: 122 AHYKLKQ---YDQ-----AKNLLDKAIKRDRIFKEARDLMIKI 156


>gi|126725124|ref|ZP_01740967.1| TPR domain protein [Rhodobacterales bacterium HTCC2150]
 gi|126706288|gb|EBA05378.1| TPR domain protein [Rhodobacterales bacterium HTCC2150]
          Length = 178

 Score = 40.1 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 39/112 (34%), Gaps = 12/112 (10%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAG 108
             D + Q+ + +  +    +  F  A   ++      P FA    +++     FV Y  G
Sbjct: 58  APDEKSQKTL-DLGLQLHAQGQFDAAKGAYDALIEYCPDFAEGYNQRA-----FVYYLTG 111

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           ++  A +  +  I   P            G++  Q+ R     Q   +  L+
Sbjct: 112 RWALALADLDRAIDLSPRHLG---ALSGKGLTLMQLGRQDEA-QLMFREALK 159


>gi|189423182|ref|YP_001950359.1| hypothetical protein Glov_0102 [Geobacter lovleyi SZ]
 gi|189419441|gb|ACD93839.1| conserved hypothetical protein [Geobacter lovleyi SZ]
          Length = 152

 Score = 40.1 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 32/92 (34%), Gaps = 7/92 (7%)

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
           +P   +    LL     +++      A       I +YP S       YL G+S      
Sbjct: 60  YPPQELIPSLLLGIGKARFNQPDRPAACDCFSSIIDRYPASPQAPEALYLNGVSRYIETH 119

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           DV         ++    R+   Y +SP++  A
Sbjct: 120 DVA-------NLVAIYDRLAAGYPDSPWLTRA 144



 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 23/67 (34%), Gaps = 3/67 (4%)

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEA-YVALALMDEAREVVSLIQERYPQGYW--AR 264
           AA   F  ++  Y  +  A EA+     + Y+    +     +   +   YP   W    
Sbjct: 85  AACDCFSSIIDRYPASPQAPEALYLNGVSRYIETHDVANLVAIYDRLAAGYPDSPWLTRA 144

Query: 265 YVETLVK 271
               L+K
Sbjct: 145 DPYRLLK 151


>gi|110598921|ref|ZP_01387165.1| TPR repeat [Chlorobium ferrooxidans DSM 13031]
 gi|110339463|gb|EAT57994.1| TPR repeat [Chlorobium ferrooxidans DSM 13031]
          Length = 586

 Score = 40.1 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 43/125 (34%), Gaps = 16/125 (12%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A + + E N+S++ +   +  +  P       +LL+ A V      Y  + +  +  I  
Sbjct: 115 AGVAMAEGNYSESIKRSRELLQIHPGN---LDALLLIAQVSSWQRDYDTSLATYDRLIAA 171

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT-NSPYVKGARFYV 182
            P           V + Y +  R + +        L    + ++RY  NS     A    
Sbjct: 172 NP-----------VPLYYREKARVLGW-MTRYDSALAEYDKAIQRYPENSALKAEAAAKR 219

Query: 183 TVGRN 187
              RN
Sbjct: 220 EYYRN 224


>gi|325916624|ref|ZP_08178887.1| hypothetical protein conserved in bacteria containing a divergent
           form of TPR repeats [Xanthomonas vesicatoria ATCC 35937]
 gi|325537178|gb|EGD08911.1| hypothetical protein conserved in bacteria containing a divergent
           form of TPR repeats [Xanthomonas vesicatoria ATCC 35937]
          Length = 251

 Score = 40.1 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 42/132 (31%), Gaps = 19/132 (14%)

Query: 64  AVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           A   L + N+++A + +       +         +L  A  Q+  G   QA    +  I 
Sbjct: 95  ARTLLSQGNYAQAADVYEGALRGLY---RDDPDLMLGLAQAQFGLGNAAQARQTLDALIA 151

Query: 123 QYPESKNVD-YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
             P  ++ D ++ Y   +  +  I             L     +V+ Y      + AR  
Sbjct: 152 ANPTFRSHDGHLLYARAVESSGTID----------EALHEYETLVQGYP----GEEARVR 197

Query: 182 VTVGRNQLAAKE 193
                 + A  E
Sbjct: 198 YAQLLQRAARPE 209


>gi|323345357|ref|ZP_08085580.1| hypothetical protein HMPREF0663_12116 [Prevotella oralis ATCC
           33269]
 gi|323093471|gb|EFZ36049.1| hypothetical protein HMPREF0663_12116 [Prevotella oralis ATCC
           33269]
          Length = 382

 Score = 40.1 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 26/179 (14%), Positives = 53/179 (29%), Gaps = 39/179 (21%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLF-----LKE--QN 72
            +    + F IA+             +Y  S      ++E YE A+       L+     
Sbjct: 97  RRTIFIVSFVIALIICATC-------IYFYSNAKGNKEQEAYEYAMKSQDPLVLQSFLDT 149

Query: 73  FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS-----LGEEYITQYPES 127
           ++ A E           +  A  + L           +  A         E+Y+ ++P++
Sbjct: 150 YTDASEA-------HRDSIQAHLTALNQI-----DKDWTNAVVSNSKMAIEDYLERHPDT 197

Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
            + +       +     I      Q  TK         +E + N  +V  A+  +    
Sbjct: 198 PHKEEA-----LHKLDSIDWANAQQANTKDA---FVSYLEDHPNGEHVDDAKDGIKNIN 248


>gi|300866468|ref|ZP_07111159.1| putative Protein prenyltransferase, alpha subunit [Oscillatoria sp.
           PCC 6506]
 gi|300335512|emb|CBN56319.1| putative Protein prenyltransferase, alpha subunit [Oscillatoria sp.
           PCC 6506]
          Length = 1012

 Score = 40.1 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 6/61 (9%), Positives = 23/61 (37%), Gaps = 9/61 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+       + + +A E +++      ++      + +     +  Y   +Y +A +  +
Sbjct: 222 EQGNTLYNLRRYDEAIEAYDKALEIDSNY------QDAWYDKGYTLYQLWRYDEAIAAYD 275

Query: 119 E 119
           +
Sbjct: 276 K 276


>gi|118381868|ref|XP_001024094.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89305861|gb|EAS03849.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 850

 Score = 40.1 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 46/114 (40%), Gaps = 16/114 (14%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
            Y KA+L  +     +A   +N+     P ++     + L    +   +GKY++A    +
Sbjct: 244 YYNKAILCKQLGKNQEALNNYNKVIEINPNYSN----AYLNKGSLFLFSGKYEEAIKNYD 299

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           + I   P  K    VYY  G+S   + R         +  ++  ++ ++   N+
Sbjct: 300 KVIQLDPNHKQ---VYYNKGISLKALGR--------YQESIENYNKAIQLDPNN 342



 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 26/207 (12%), Positives = 58/207 (28%), Gaps = 37/207 (17%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
            Q++ ++  +    +  F +A   +++     P       +         S  +YQ+A  
Sbjct: 2   SQQKYHQAGLTQQSQGKFQEAVNSYSKAIELDP--QYTE-AYCNRGVALNSLNQYQEAIK 58

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
              + +   P  K     YY  G+S   +        +  +  +   +++VE   N    
Sbjct: 59  NYNKALEINPNYKL---AYYNKGISLQAL--------KQLQEAISCYTKVVEIDPNYK-- 105

Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
             A     +               +    ++  A+  F   L           A   +  
Sbjct: 106 -QAHLNKGLC--------------FFNLNQFQEALNNFNKALQCDPKYSL---ACYNIAL 147

Query: 236 AYVALALMDEAREVVSL---IQERYPQ 259
           +Y  L    +A         +   Y  
Sbjct: 148 SYQKLGQSQQALTYYDKAINLDPNYKN 174


>gi|83814061|ref|YP_446792.1| TPR repeat-containing protein [Salinibacter ruber DSM 13855]
 gi|83755455|gb|ABC43568.1| TPR repeat protein [Salinibacter ruber DSM 13855]
          Length = 554

 Score = 40.1 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 69/216 (31%), Gaps = 52/216 (24%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
             ++   V   +++    A E F +C+  +P      +      +     G+ +++    
Sbjct: 225 EALFNLGVTLERDEQLEAAVEAFQRCADVYPEHP---EVWYELGYCYDRLGEDEKSVEAY 281

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           + ++   P SK+    +Y  G+   ++ R                   VE Y        
Sbjct: 282 DNHLDIDPYSKD---AWYNRGIVLNRLGR---------------FGEAVESY------DM 317

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLK------RGEYVAAIPRFQLVLA-NYSDAEHAEEAM 230
           A          LA  +     YY +      +G+  AA+  ++ VL     DA       
Sbjct: 318 A----------LAIHDEFASAYYNRGNAEANQGDLEAAVESYERVLELEGPDAATY---- 363

Query: 231 ARLVEAYVALALMDEAREVVSL---IQERYPQGYWA 263
             L  AY     +  AR        ++  YP+  W 
Sbjct: 364 YNLALAYEEQGDLRAARTYYEKTLDLKSNYPEA-WY 398



 Score = 38.6 bits (89), Expect = 0.91,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 74/248 (29%), Gaps = 65/248 (26%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           E A  + +E     A E  ++     P+      R+ +L++     + G+ ++A    E+
Sbjct: 127 EIASFYFEEGEMETALEVIDRLIELHPYTSDAWMRRGILLN-----NLGRPEEALEAYEQ 181

Query: 120 YITQYPESKN--------------VDYVY--Y--------LVGMSYAQMIRDVPYDQRAT 155
            +   P                  VD     Y        L G +   +   +  D++  
Sbjct: 182 ALDVNPTDTETLINLGITLDSLGRVDEALEAYDEALSINPLHGEALFNLGVTLERDEQ-L 240

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY-------------YLK 202
           +  ++   R  + Y   P      + +    ++L   E  +  Y             +  
Sbjct: 241 EAAVEAFQRCADVYPEHP---EVWYELGYCYDRLGEDEKSVEAYDNHLDIDPYSKDAWYN 297

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMAR---LVEAYVALA--------LMDEAREVVS 251
           RG  +  + RF   + +Y      + A+A       AY            L         
Sbjct: 298 RGIVLNRLGRFGEAVESY------DMALAIHDEFASAYYNRGNAEANQGDLEAAVESYER 351

Query: 252 LIQERYPQ 259
           +++   P 
Sbjct: 352 VLELEGPD 359



 Score = 35.1 bits (80), Expect = 9.9,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 70/236 (29%), Gaps = 50/236 (21%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY-------SAGKYQQA 113
           Y + ++  +   F +A E ++                   A   Y       + G  + A
Sbjct: 296 YNRGIVLNRLGRFGEAVESYDMALAIHD----------EFASAYYNRGNAEANQGDLEAA 345

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
               E  +    E  +    YY + ++Y +       D RA +   +    +   Y  + 
Sbjct: 346 VESYERVLEL--EGPDAA-TYYNLALAYEEQG-----DLRAARTYYEKTLDLKSNYPEAW 397

Query: 174 Y-----------VKGARFYVTVGRNQLAAKEVEIGRYYLKRG--EYVAAIPRFQLVLANY 220
           Y            + A        N  A     + +++  R    Y   + +    L +Y
Sbjct: 398 YGLGCCFDTDERPEEALECFRYAVNLDA----NVPKFWTARADCAYK--VGKLDEALESY 451

Query: 221 SDA----EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG--YWARYVETLV 270
             A    E  E A     E  +     +EA E      E  P+    + R  + L+
Sbjct: 452 QHAVRLDESNEHAWTGYAETLLEKEQPEEALEAYRQALELDPKSANTYFRQAKALL 507


>gi|56420359|ref|YP_147677.1| hypothetical protein GK1824 [Geobacillus kaustophilus HTA426]
 gi|47076784|dbj|BAD18326.1| hypothetical protein [Geobacillus kaustophilus]
 gi|56380201|dbj|BAD76109.1| hypothetical protein [Geobacillus kaustophilus HTA426]
          Length = 1358

 Score = 40.1 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 3/68 (4%)

Query: 63   KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
            +AV++L+E    KA         + P   +AR++L++        G+YQ+AA+L E Y  
Sbjct: 1240 QAVVWLQEGQHEKAERQLEAIVAEEP---LAREALMLLGEQYMETGRYQEAAALWERYAD 1296

Query: 123  QYPESKNV 130
             YPE + +
Sbjct: 1297 WYPEDEEL 1304


>gi|115470301|ref|NP_001058749.1| Os07g0113700 [Oryza sativa Japonica Group]
 gi|33147009|dbj|BAC80093.1| tetratricopeptide repeat(TPR)-containing protein-like [Oryza sativa
           Japonica Group]
 gi|34393726|dbj|BAC83208.1| tetratricopeptide repeat(TPR)-containing protein-like [Oryza sativa
           Japonica Group]
 gi|113610285|dbj|BAF20663.1| Os07g0113700 [Oryza sativa Japonica Group]
 gi|218198988|gb|EEC81415.1| hypothetical protein OsI_24660 [Oryza sativa Indica Group]
          Length = 1011

 Score = 40.1 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 64/206 (31%), Gaps = 35/206 (16%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            + +  + E  + +A   F+Q  R+ P      ++L+          +   A S   + I
Sbjct: 269 SRGIAQVNEGRYDQAISIFDQILRETPTYP---EALIGRGTAYAFQRELDSAISDFTKAI 325

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              P   +    +   G + A +              ++ +++ +E   NSP        
Sbjct: 326 QSNP---SAGEAWKRRGQARAAL--------GEFTEAVEDLTKALEFEPNSP-------- 366

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
                + L   E  I  +  K  +Y AA+      +        A      L     AL 
Sbjct: 367 -----DIL--HERGIVNF--KFKDYNAAVEDLSTCVKRDKKNSSAH---TYLGLTLSALG 414

Query: 242 LMDEAREVVSLIQERYPQGYWARYVE 267
               A +   L+  +Y + +   +  
Sbjct: 415 EYKRAED-EHLLGIKYDENFLDSWAH 439


>gi|322418094|ref|YP_004197317.1| hypothetical protein GM18_0560 [Geobacter sp. M18]
 gi|320124481|gb|ADW12041.1| hypothetical protein GM18_0560 [Geobacter sp. M18]
          Length = 186

 Score = 40.1 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 23/57 (40%), Gaps = 7/57 (12%)

Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
           P S       YL G++  +       D  A K + Q   ++  +Y  S + + A+ Y
Sbjct: 134 PRSYAAPEALYLRGVARYK----SSRDNSALKEIYQ---QLAAQYPESEWTQKAQPY 183



 Score = 39.3 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 3/80 (3%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSL 252
           + IG+  L  G++  A+ +F  +L     +  A EA+     A    +  + A +E+   
Sbjct: 107 LGIGKVSLDLGQFSEAVIQFNTLLNGCPRSYAAPEALYLRGVARYKSSRDNSALKEIYQQ 166

Query: 253 IQERYPQGYWARYV--ETLV 270
           +  +YP+  W +     TL+
Sbjct: 167 LAAQYPESEWTQKAQPYTLL 186


>gi|158338544|ref|YP_001519721.1| TPR domain-containing protein [Acaryochloris marina MBIC11017]
 gi|158308785|gb|ABW30402.1| TPR domain protein [Acaryochloris marina MBIC11017]
          Length = 488

 Score = 40.1 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 38/121 (31%), Gaps = 23/121 (19%)

Query: 48  LDSVTDVRYQ--REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF--- 102
           LD + DV+     + Y +    LK ++++ A   F++     P            A+   
Sbjct: 245 LDPLPDVQEPTAADFYLQGGDKLKRKDYAGAIADFSEAIELDP--EYVE------AYYGR 296

Query: 103 --VQYSAGKYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLM 158
               Y      +A     + I   P     DY   Y   G+  A   RD        +  
Sbjct: 297 SLGHYRQRDSFKAIEDLTQAIKLNP-----DYTQAYVQRGVVKAN-SRDTSGSLSDYRQA 350

Query: 159 L 159
           L
Sbjct: 351 L 351


>gi|126332161|ref|XP_001367572.1| PREDICTED: similar to KIAA0155 [Monodelphis domestica]
          Length = 1168

 Score = 40.1 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 41/273 (15%), Positives = 99/273 (36%), Gaps = 33/273 (12%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
           A L RA    E   +     ++T  +++A  +    E   +  +Y + + +     + Y 
Sbjct: 476 ASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYL 535

Query: 63  K-AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           +   +   + NF +A ++F +    ++D P    +    L  A       ++       E
Sbjct: 536 RLGAMARDKGNFYEASDWFKEALQINQDHP-DAWSLIGNLHLA-----KQEWGPGQKKFE 589

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ----RATKLMLQYMSRIVERYTNSPY 174
             + Q P ++N  Y    +G  + Q +     D+    R     L    +++     + Y
Sbjct: 590 RILKQ-PSTQNDTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLY 648

Query: 175 VKGA-------RFYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVL 217
                      + Y    R+  A  +E         + +   Y+++ +Y++A+  ++  L
Sbjct: 649 AANGIGAVLAHKGYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCL 708

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
             +   ++ E  +  L  A      + E ++ +
Sbjct: 709 RKFYKHQNTEVVLY-LARALFKCGKLQECKQTL 740


>gi|189424871|ref|YP_001952048.1| hypothetical protein Glov_1812 [Geobacter lovleyi SZ]
 gi|189421130|gb|ACD95528.1| Tetratricopeptide TPR_2 repeat protein [Geobacter lovleyi SZ]
          Length = 406

 Score = 40.1 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 58/180 (32%), Gaps = 46/180 (25%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV-GMSYAQMIRDVPYDQRAT 155
           LL+ A   Y +G Y  A S  +E +   P+++ V    Y   G +Y     D        
Sbjct: 46  LLLKADTAYLSGDYSTAISAYQEALRLSPDNQLV----YQKLGEAYFSAGED-------- 93

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI------------------- 196
           +  L      +++             +      L  ++  I                   
Sbjct: 94  EEALATFKTYLKK------STSTSARIHYVSGVLLERQGNIDAALDEYNAAMAIDPIHSG 147

Query: 197 -----GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
                   Y+ RGE+  AI  +Q++     ++      + +L  AYV     D+A EV  
Sbjct: 148 ARRRRADIYIIRGEFKKAINEYQILHEASPNSPIL---LYKLSRAYVKDKQFDKALEVYR 204


>gi|47227439|emb|CAG04587.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 553

 Score = 40.1 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 42/117 (35%), Gaps = 11/117 (9%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           LT +   AV   +G  + +  D+         +     ++  + LK+ N  +A E FN+ 
Sbjct: 73  LTFYKRAAVFLAMGKSKSALPDLTRAIQLKPDFLAARLQRGNILLKQGNTQEAREDFNEV 132

Query: 84  SRDFPFAGVARKSLLMS----------AFVQYSAGKYQQAASLGEEYITQYPESKNV 130
            +       A++  LM           A   Y  G Y    S+ E  I   P   +V
Sbjct: 133 LQRSADNEEAQQ-QLMKTHELVGLQEEAHAAYHQGDYSTTISVLERVIEISPWDPDV 188


>gi|323496602|ref|ZP_08101655.1| hypothetical protein VISI1226_13321 [Vibrio sinaloensis DSM 21326]
 gi|323318348|gb|EGA71306.1| hypothetical protein VISI1226_13321 [Vibrio sinaloensis DSM 21326]
          Length = 260

 Score = 40.1 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 43/130 (33%), Gaps = 23/130 (17%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               Y  A +  +++   YP+S      +Y +G  Y    +D        K  ++  + +
Sbjct: 154 KKRDYTGAIAAFQQFQKDYPDSSFTPNSHYWLGQLYFAKKQD--------KEAVKSFAAV 205

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           V  Y  S     A   +       A +     +          A   +Q VL  Y  +  
Sbjct: 206 VS-YKKSNKRADALVKLGDI----AGRNNNAAQ----------ANKYYQQVLDEYPSSAS 250

Query: 226 AEEAMARLVE 235
           A+ A  R+ +
Sbjct: 251 AKLAQERIKK 260



 Score = 39.3 bits (91), Expect = 0.63,   Method: Composition-based stats.
 Identities = 22/159 (13%), Positives = 55/159 (34%), Gaps = 16/159 (10%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDF 87
           + A           ++     + +    ++  Y+ AV   LK+++++ A   F Q  +D+
Sbjct: 113 ATAAPVAASTTDGDTKPSAGGTFSSNADEQTAYQNAVDLILKKRDYTGAIAAFQQFQKDY 172

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAA---SLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
           P +     S      + ++  + ++A    +    Y      +K  D       +     
Sbjct: 173 PDSSFTPNSHYWLGQLYFAKKQDKEAVKSFAAVVSYKK---SNKRAD------ALVKLGD 223

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
           I              +Y  ++++ Y +S   K A+  + 
Sbjct: 224 IAGRN---NNAAQANKYYQQVLDEYPSSASAKLAQERIK 259



 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 47/130 (36%), Gaps = 15/130 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            Q   D+   +R     +    +  + Y +S +   + +++              G+ Y 
Sbjct: 145 YQNAVDLILKKRDYTGAIAAFQQFQKDYPDSSFTPNSHYWL--------------GQLYF 190

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + +   A+  F  V+ +Y  +    +A+ +L +         +A +    + + YP   
Sbjct: 191 AKKQDKEAVKSFAAVV-SYKKSNKRADALVKLGDIAGRNNNAAQANKYYQQVLDEYPSSA 249

Query: 262 WARYVETLVK 271
            A+  +  +K
Sbjct: 250 SAKLAQERIK 259


>gi|294783902|ref|ZP_06749224.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA]
 gi|294479714|gb|EFG27493.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA]
          Length = 441

 Score = 40.1 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 19/43 (44%)

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
            E    +  +Y  L    E  + + L+++ +P   WA+  E L
Sbjct: 394 PEIYYNIASSYAKLGNRVEVTKYIRLLKQEFPSSSWAKKSEAL 436


>gi|294055392|ref|YP_003549050.1| Tetratricopeptide TPR_2 repeat protein [Coraliomargarita
           akajimensis DSM 45221]
 gi|293614725|gb|ADE54880.1| Tetratricopeptide TPR_2 repeat protein [Coraliomargarita
           akajimensis DSM 45221]
          Length = 652

 Score = 40.1 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 13/106 (12%), Positives = 29/106 (27%), Gaps = 22/106 (20%)

Query: 91  GVARKSLLMSAFVQYS-----------AGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
             A ++ L  A   +             G  + A    +  +   P S +   +YY    
Sbjct: 558 EYASRA-LDLADDYWRCWAQLGVGYALLGDVEAAGQAFDRAVELAPNSSSA--LYYWAAF 614

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           S          D    +     + R +E   ++   +     + + 
Sbjct: 615 S--------SRDATRVREATHAVERALELDPDNEAARRLLQKLRIL 652


>gi|294654974|ref|XP_457061.2| DEHA2B02156p [Debaryomyces hansenii CBS767]
 gi|199429595|emb|CAG85047.2| DEHA2B02156p [Debaryomyces hansenii]
          Length = 378

 Score = 40.1 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 46/113 (40%), Gaps = 14/113 (12%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA-ASL 116
            +++ K    LKE+++  A   +    ++ P    + ++LL  +        Y+ A   +
Sbjct: 7   EQLFTKGDTELKEKDYLSAIATYTAALKEHP---KSIQALLKRSTAYRKLNNYENAKKDV 63

Query: 117 GEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            + ++    + K  +    Y+ +G+ Y          +R  K+ L+   + VE
Sbjct: 64  SDAFVIAEQKGKRAELGACYFRLGLIYYA--------ERNYKVALKNFEKSVE 108


>gi|291276674|ref|YP_003516446.1| hypothetical protein HMU04420 [Helicobacter mustelae 12198]
 gi|290963868|emb|CBG39704.1| putative periplasmic protein [Helicobacter mustelae 12198]
          Length = 322

 Score = 40.1 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 48/131 (36%), Gaps = 16/131 (12%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQC-SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           V++ A   L+ +N+ +A +       + +    +A     M   + YS  +YQ A S  +
Sbjct: 205 VFQDAKSSLRSKNYDQARKSLEILVKKKY---KLAE-VYFMLGDISYSKKEYQTAVSYYK 260

Query: 119 EYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           +       S  +D    Y+  +             +  K   ++   +V+ Y NS   + 
Sbjct: 261 K-------SFTLDEGANYMPVL--LWRTAWSFRYLKDAKNYDRFTEILVKHYPNSEQAQK 311

Query: 178 ARFYVTVGRNQ 188
               +   +N+
Sbjct: 312 ILE-MREKKNK 321


>gi|118375735|ref|XP_001021051.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89302818|gb|EAS00806.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 443

 Score = 40.1 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 35/252 (13%), Positives = 77/252 (30%), Gaps = 42/252 (16%)

Query: 30  IAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFP 88
           + + +    + Q + +++ D V       EV+  KAV  ++ + F +A            
Sbjct: 90  LGLAYASSGDLQKALNIFEDLVKKDPNNLEVFFNKAVALIENKKFDEAILILMDLINQ-- 147

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
                 K+         S  K ++A    ++Y           Y+     +         
Sbjct: 148 --KY-EKAYFKLVDCFVSLNKREEAMKYLQQYYQINSGDSQKTYLLGEKAI--------- 195

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE------------- 195
             D +     ++   + V+              +T    ++  K +              
Sbjct: 196 --DIQEVDYAVECFEKAVQLDPKHQNAC-LFLGMTYYNKKMYEKSIHYYLKTSEINPKNF 252

Query: 196 -----IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
                +G  YL++ EY  A+  F+              A+      Y+ +   DEA ++ 
Sbjct: 253 TCLNGLGIVYLEQKEYEKALQYFEQSCKLEP--RFVP-ALFHKGYTYLKMGKDDEALKIF 309

Query: 251 S---LIQERYPQ 259
           +   L+ + YP 
Sbjct: 310 NQVILMDKNYPD 321


>gi|332140188|ref|YP_004425926.1| putative unknown membrane associated protein [Alteromonas macleodii
           str. 'Deep ecotype']
 gi|327550210|gb|AEA96928.1| putative unknown membrane associated protein [Alteromonas macleodii
           str. 'Deep ecotype']
          Length = 441

 Score = 40.1 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 28/72 (38%), Gaps = 1/72 (1%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
           ++ V    + +      ++  A L L + N+ +   Y  +         V  K+ ++ A 
Sbjct: 119 AKVVEQQPIPEKFEMTTLFSLAQLNLMQGNYDETITYLERWESLN-TGPVPVKNKVIKAQ 177

Query: 103 VQYSAGKYQQAA 114
             Y   +Y +AA
Sbjct: 178 AYYQNKQYDEAA 189


>gi|322821466|gb|EFZ27783.1| mitochondrial import receptor subunit, putative [Trypanosoma cruzi]
          Length = 403

 Score = 40.1 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 15/94 (15%), Positives = 31/94 (32%), Gaps = 11/94 (11%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAG 108
                   E   +    +K+ N  KA   +++  +  P +    + ++  M         
Sbjct: 102 PQKTEKAEEYRARGNDAMKQGNLRKAVRCYSEALKYEPSSSTLWSNRAAAMI-----QLD 156

Query: 109 KYQQAASLGEEYITQYPESKNVDY----VYYLVG 138
           +   A S  +  I+  P +    Y      YL+G
Sbjct: 157 RGDDALSDAKRAISLDPMNVKAYYRKASALYLLG 190


>gi|319790424|ref|YP_004152057.1| Tetratricopeptide TPR_1 repeat-containing protein [Thermovibrio
           ammonificans HB-1]
 gi|317114926|gb|ADU97416.1| Tetratricopeptide TPR_1 repeat-containing protein [Thermovibrio
           ammonificans HB-1]
          Length = 650

 Score = 40.1 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 20/107 (18%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ- 111
            V  + ++++K +   K  ++S A EYF       P +   +K+L M A   Y+ GK   
Sbjct: 23  KVDVEAKLFQKGLQQFKIGSYSTALEYF--IRALKPGSKYYKKALFMLAKTYYAIGKKLG 80

Query: 112 ------QAASLGE-EYITQYPESKNV--DYVYYLVG-----MSYAQM 144
                 QA +  E  +I     +  +  DY YYL       +S+ + 
Sbjct: 81  NKQYLWQALNYLELYFIAV--GNHKLPWDY-YYLRAQIYESLSFYEQ 124


>gi|253989561|ref|YP_003040917.1| tetratricopeptide repeat-containing protein [Photorhabdus
           asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253781011|emb|CAQ84173.1| conserved hypothetical protein [Photorhabdus asymbiotica]
          Length = 389

 Score = 40.1 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 70/190 (36%), Gaps = 32/190 (16%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT- 122
              ++    + +A   F Q   +  F   A +SLL+      S   +++A  + E+ +  
Sbjct: 114 GRDYMSAGLYDRAENMFAQLVNEKEFRQNAFQSLLVI---YQSTSDWKKAIDVAEKLVKS 170

Query: 123 -QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
            ++   + + + Y  + +   Q +     D       + Y+++ V+   N          
Sbjct: 171 GKHELRQKIAHFYCELAL---QEMSGDDLD-----EAIGYLNKAVQADKNC--------- 213

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
                   A   + +GR ++ R EY+ A    + VL    D E   E++  L E Y  L 
Sbjct: 214 --------ARVSIMLGRLFMARQEYIKAADALKSVLE--QDKELVSESLPMLQECYQHLN 263

Query: 242 LMDEAREVVS 251
             DE    + 
Sbjct: 264 QGDEWENFLR 273


>gi|166366450|ref|YP_001658723.1| heat shock protein 40 [Microcystis aeruginosa NIES-843]
 gi|166088823|dbj|BAG03531.1| heat shock protein 40 [Microcystis aeruginosa NIES-843]
          Length = 421

 Score = 40.1 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 52/134 (38%), Gaps = 14/134 (10%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
           ++  R +  +  T      + Y++   + +E+N+  A  ++ Q     P      ++ L 
Sbjct: 62  KEYDRSLSPEIPTFNPSAEDFYQQGWHYAQEKNYQLAIAFYQQAIAINPQ-FW--QAYLQ 118

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
            A V Y   + +Q  S   + +   P   +    YY +G+S  ++          T+  L
Sbjct: 119 RAEVYYHNQQDRQVLSDCRQVLQLKP---DCSQAYYYLGLSRQRL--------GYTQSSL 167

Query: 160 QYMSRIVERYTNSP 173
           +   + +    ++P
Sbjct: 168 EAYRKAIAIDPDNP 181


>gi|315186029|gb|EFU19792.1| Tetratricopeptide TPR_1 repeat-containing protein [Spirochaeta
           thermophila DSM 6578]
          Length = 458

 Score = 40.1 bits (93), Expect = 0.37,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 36/102 (35%), Gaps = 11/102 (10%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
             D +    Y  ++Y +A        +  A   F + S   P      +SL+       +
Sbjct: 198 DPDILPAYYYLGKIYREAKE------YHAALLSFEK-SVRHP--DYKLRSLIERGTCYLN 248

Query: 107 AGKYQQAASLGEEYITQYP--ESKNVDYVYYLVGMSYAQMIR 146
            G Y+ A    E  +   P   +  + Y  Y + ++Y +  R
Sbjct: 249 MGDYESAIMELERAVKLSPEATNPEMLYARYFLSIAYEKRRR 290


>gi|170078757|ref|YP_001735395.1| TPR domain-containing protein [Synechococcus sp. PCC 7002]
 gi|169886426|gb|ACB00140.1| TPR domain containing protein [Synechococcus sp. PCC 7002]
          Length = 288

 Score = 40.1 bits (93), Expect = 0.37,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 36/124 (29%), Gaps = 15/124 (12%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CS 84
             +    L+G           ++  +     + Y   V  L + NF  A   F+      
Sbjct: 22  ILLGTVLLLGSGTPGLSQTAPETSNNAANAIQRYNAGVDALTQGNFEGAIAEFSAAINLD 81

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV----DYVYYLVGMS 140
              P       +     +  +  G+YQ A     + I   PE  +      Y  YL  + 
Sbjct: 82  ESDP------DAYYNRGYSYHVLGEYQAAYDDYSQAIQLKPEFADAYGNRCYAAYL--LD 133

Query: 141 YAQM 144
             + 
Sbjct: 134 NYEQ 137


>gi|327438801|dbj|BAK15166.1| FOG: TPR repeat [Solibacillus silvestris StLB046]
          Length = 508

 Score = 40.1 bits (93), Expect = 0.37,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 31/81 (38%), Gaps = 12/81 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           EKA   +++ +F  A E   Q   ++P  +           A   +  G+ +QA +L   
Sbjct: 156 EKARRHMEQGDFKTAIEMLEQIIEEYPDLWNAYN-----NLALAYFYVGEAEQARALLYR 210

Query: 120 YITQYPESKN-----VDYVYY 135
            + +   + +       + YY
Sbjct: 211 VLRENQGNLHALCNLAVFAYY 231


>gi|294508725|ref|YP_003572784.1| Conserved hypothetical protein containing TPR domain [Salinibacter
           ruber M8]
 gi|294345055|emb|CBH25833.1| Conserved hypothetical protein containing TPR domain [Salinibacter
           ruber M8]
          Length = 554

 Score = 40.1 bits (93), Expect = 0.37,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 69/216 (31%), Gaps = 52/216 (24%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
             ++   V   +++    A E F +C+  +P      +      +     G+ +++    
Sbjct: 225 EALFNLGVTLERDEQLEAAVEAFQRCADVYPEHP---EVWYELGYCYDRLGEDEKSVEAY 281

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           + ++   P SK+    +Y  G+   ++ R                   VE Y        
Sbjct: 282 DNHLDIDPYSKD---AWYNRGIVLNRLGR---------------FGEAVESY------DM 317

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLK------RGEYVAAIPRFQLVLA-NYSDAEHAEEAM 230
           A          LA  +     YY +      +G+  AA+  ++ VL     DA       
Sbjct: 318 A----------LAIHDEFASAYYNRGNAEANQGDLEAAVESYERVLELEGPDAATY---- 363

Query: 231 ARLVEAYVALALMDEAREVVSL---IQERYPQGYWA 263
             L  AY     +  AR        ++  YP+  W 
Sbjct: 364 YNLALAYEEQGDLRAARTYYEKTLDLKSNYPEA-WY 398



 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 74/248 (29%), Gaps = 65/248 (26%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           E A  + +E     A E  ++     P+      R+ +L++     + G+ ++A    E+
Sbjct: 127 EIASFYFEEGEMETALEVIDRLIELHPYTSDAWMRRGILLN-----NLGRPEEALEAYEQ 181

Query: 120 YITQYPESKN--------------VDYVY--Y--------LVGMSYAQMIRDVPYDQRAT 155
            +   P                  VD     Y        L G +   +   +  D++  
Sbjct: 182 ALDVNPTDTETLINLGITLDSLGRVDEALEAYDEALSINPLHGEALFNLGVTLERDEQ-L 240

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY-------------YLK 202
           +  ++   R  + Y   P      + +    ++L   E  +  Y             +  
Sbjct: 241 EAAVEAFQRCADVYPEHP---EVWYELGYCYDRLGEDEKSVEAYDNHLDIDPYSKDAWYN 297

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMAR---LVEAYVALA--------LMDEAREVVS 251
           RG  +  + RF   + +Y      + A+A       AY            L         
Sbjct: 298 RGIVLNRLGRFGEAVESY------DMALAIHDEFASAYYNRGNAEANQGDLEAAVESYER 351

Query: 252 LIQERYPQ 259
           +++   P 
Sbjct: 352 VLELEGPD 359


>gi|171915654|ref|ZP_02931124.1| Peptidase C39, bacteriocin processing [Verrucomicrobium spinosum
           DSM 4136]
          Length = 1793

 Score = 40.1 bits (93), Expect = 0.37,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 30/84 (35%), Gaps = 4/84 (4%)

Query: 71  QNFSKAYEYFNQCSRDFPFA-GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
             + +A ++F       P    + +K+LL    V    G+  +A  L    + Q     +
Sbjct: 208 GRYDEAQKWFEASQSRAPLGHPMHQKALLRLGVVAMDRGELDKATELFAR-LRQNDSDPS 266

Query: 130 -VDYVYY-LVGMSYAQMIRDVPYD 151
            + Y  Y +  +   +  +    D
Sbjct: 267 RMTYASYWIRALGLMKAKQTALRD 290


>gi|148262450|ref|YP_001229156.1| peptidoglycan-binding LysM [Geobacter uraniireducens Rf4]
 gi|146395950|gb|ABQ24583.1| Peptidoglycan-binding LysM [Geobacter uraniireducens Rf4]
          Length = 200

 Score = 40.1 bits (93), Expect = 0.37,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 28/62 (45%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           SS   +     +    +++++KA    K+ ++ +A + F++    F  + +A  + L  A
Sbjct: 132 SSVTTHPAVKQEPDAGQQLFQKAARAYKKGDYRQALKAFDRFLSKFSNSPLAADASLYRA 191

Query: 102 FV 103
             
Sbjct: 192 DC 193


>gi|225620512|ref|YP_002721769.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
 gi|225215331|gb|ACN84065.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
          Length = 712

 Score = 40.1 bits (93), Expect = 0.37,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 69/187 (36%), Gaps = 30/187 (16%)

Query: 93  ARKSLLMSAFVQYSAGKYQ----QAASLGEEYITQ-YPESKNVDYVYYLVGMSYAQMIRD 147
           A  +LL+ A    + G+ +    QA    +++I    PE+  V    +  G+ Y  +   
Sbjct: 117 AYDALLILASSYLNNGENEADFHQAIGYYDDFIKNVKPENSKV--ARFERGLCYYNLNIL 174

Query: 148 VPYDQRATKLMLQY-MSR---------IVERYTNSPYVKGARFYVTVGRNQLAAKEVEI- 196
              D  A KL+  +             + +  T S +   A F++       A+    I 
Sbjct: 175 TKADIEANKLIYDFPFYDDAYFLKGIILAKNGTKSEFYDDAIFFLDRAVELNASNYNAIY 234

Query: 197 --GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
             G +Y  +  Y  AI  +  +L +  + ++   A+   ++A   L + +E         
Sbjct: 235 ERGEWYFNKENYRKAIENYNELLKH--NNKYRLNALLGKIQALHDLIIENE--------N 284

Query: 255 ERYPQGY 261
           E YP   
Sbjct: 285 ENYPDSQ 291


>gi|224532851|ref|ZP_03673466.1| hypothetical protein BBUWI9123_0229 [Borrelia burgdorferi WI91-23]
 gi|224512240|gb|EEF82626.1| hypothetical protein BBUWI9123_0229 [Borrelia burgdorferi WI91-23]
          Length = 791

 Score = 40.1 bits (93), Expect = 0.37,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 75/220 (34%), Gaps = 44/220 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLG 117
           +  ++     NF ++ EY N       F   A+K    ++   +  ++   K +++    
Sbjct: 553 KAGIVSNNLGNFKQSEEYLNF------FNANAKKPNEIAIYNLSIAKFENNKLEESLETI 606

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYV 175
            + I   P  + ++Y  YL      +            +  +   S ++E+     S Y+
Sbjct: 607 NKAIDLNP--EKIEY-LYLKASINLKK--------ENYQNAISLYSLVIEKNPENTSAYI 655

Query: 176 KGARFYVTVGRNQLAAKEVE-------------IGRYYLKRGEYVAAIPRFQLVLANYSD 222
             A+ Y   G    A   +E             +G  Y K   Y  AI  F+  + N   
Sbjct: 656 NLAKAYEKSGNKSQAISTLEKIINKNNKLALNNLGILYKKEKNYQKAIEIFEKAIIN--- 712

Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQ 259
                EA   L    + +     A++++     ++   P+
Sbjct: 713 --SDIEAKYNLATTLIEINDNTRAKDLLREYTKLKPNNPE 750



 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 3/62 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y KA + LK++N+  A   ++      P       + +  A     +G   QA S  E+
Sbjct: 620 LYLKASINLKKENYQNAISLYSLVIEKNPEN---TSAYINLAKAYEKSGNKSQAISTLEK 676

Query: 120 YI 121
            I
Sbjct: 677 II 678


>gi|163802038|ref|ZP_02195934.1| hypothetical protein 1103602000573_AND4_03434 [Vibrio sp. AND4]
 gi|159174179|gb|EDP58987.1| hypothetical protein AND4_03434 [Vibrio sp. AND4]
          Length = 251

 Score = 40.1 bits (93), Expect = 0.37,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 48/130 (36%), Gaps = 15/130 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            Q   D+   +R     +    +  + Y +S Y   + +++              G+ Y 
Sbjct: 137 YQDAVDLILKKRDYSGAIAAFQQFQKDYPDSTYSANSNYWL--------------GQLYF 182

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + +   A+  F  V+++   +    +A+ +L +         +A++    + + YP   
Sbjct: 183 AKKQDKEAVKSFAAVVSD-KGSNKRADALVKLGDIAERNNNDAQAKKYYQQVVDEYPGSA 241

Query: 262 WARYVETLVK 271
            A+   + +K
Sbjct: 242 SAKVAGSKLK 251


>gi|124008252|ref|ZP_01692948.1| serine/threonine protein kinases [Microscilla marina ATCC 23134]
 gi|123986201|gb|EAY26030.1| serine/threonine protein kinases [Microscilla marina ATCC 23134]
          Length = 920

 Score = 40.1 bits (93), Expect = 0.37,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 69/186 (37%), Gaps = 21/186 (11%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV---ARK 95
             + + + Y  S       + +  +   +   +N+ KA E + +    +        +R+
Sbjct: 129 AHEKAIEYYQKSYQLKPAPQLLMAQGKSYYLSKNYPKATETYQKALNIYQTKQDVGQSRQ 188

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN---VDYVYYLVGMSYAQMIRDVPYDQ 152
           +L M A +  + G+YQQA    ++ +    +S     +   Y  +G+ + ++        
Sbjct: 189 ALTMLANIYTTTGQYQQALVSSQQLLQLNQKSTQLGVLADTYNNIGVLHQKLEE-----P 243

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
                       + E+  +S  V   R  + +  N        IG  Y ++ ++  A+ +
Sbjct: 244 TKALAAFNQALPLYEQLPSS--VVYQRKKINLLTN--------IGTIYTQQRQFGNALNQ 293

Query: 213 FQLVLA 218
           +Q  + 
Sbjct: 294 YQKGVK 299


>gi|224534083|ref|ZP_03674666.1| hypothetical protein BBUCA112A_0219 [Borrelia burgdorferi CA-11.2a]
 gi|224512782|gb|EEF83150.1| hypothetical protein BBUCA112A_0219 [Borrelia burgdorferi CA-11.2a]
          Length = 1065

 Score = 40.1 bits (93), Expect = 0.38,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 3/62 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y KA + LK+ N+  A   ++      P       + +  A     +G   QA S  E+
Sbjct: 894 LYLKASINLKKGNYQNAISLYSLVIEKNPEN---TSAYINLAKAYEKSGNKSQAISTLEK 950

Query: 120 YI 121
            I
Sbjct: 951 II 952



 Score = 39.7 bits (92), Expect = 0.40,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 74/220 (33%), Gaps = 44/220 (20%)

Query: 62   EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLG 117
            +  ++     NF ++ +Y N       F   A+K    ++   +  ++   K +++    
Sbjct: 827  KAGIVSNNLGNFKQSEKYLNF------FNANAKKPNEIAIYNLSIAKFENNKLEESLETI 880

Query: 118  EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYV 175
             + I   P  +  +Y  YL      +            +  +   S ++E+     S Y+
Sbjct: 881  NKAIDLNP--EKSEY-LYLKASINLKK--------GNYQNAISLYSLVIEKNPENTSAYI 929

Query: 176  KGARFYVTVGRNQLAAKEVE-------------IGRYYLKRGEYVAAIPRFQLVLANYSD 222
              A+ Y   G    A   +E             +G  Y K   Y  AI  F+  + N   
Sbjct: 930  NLAKAYEKSGNKSQAISTLEKIINKNNKLALNNLGILYKKEKNYQKAIEIFEKAIIN--- 986

Query: 223  AEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQ 259
                 EA   L    + +     A++++     ++   P+
Sbjct: 987  --SDIEAKYNLATTLIEINDNTRAKDLLREYTKLKPNNPE 1024



 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 41/279 (14%), Positives = 83/279 (29%), Gaps = 74/279 (26%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSR 85
           ++A  +    +   + + Y   +     Q + Y+  ++  K + +  + E F+   +   
Sbjct: 693 TLAQAYENNGDLLKAENAYEKIIKLTNTQEDHYKLGIIRFKLKKYEHSIESFDQTIKLDP 752

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
                   +K+L           K ++A    E+ I      KN    YY  G++     
Sbjct: 753 KH------KKALHNKGIALMMLNKNKKAIESFEKAIQI---DKNYSTAYYQKGIA----- 798

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------------RFYVTVGR------ 186
            +   D +      +    + ++  N  Y   A               Y+          
Sbjct: 799 EEKNGDMQQAFESFKNAYNLDKK-PN--YALKAGIVSNNLGNFKQSEKYLNFFNANAKKP 855

Query: 187 NQLAAKEVEIGRY------------------------Y--------LKRGEYVAAIPRFQ 214
           N++A   + I ++                        Y        LK+G Y  AI  + 
Sbjct: 856 NEIAIYNLSIAKFENNKLEESLETINKAIDLNPEKSEYLYLKASINLKKGNYQNAISLYS 915

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           LV+    +   A      L +AY       +A   +  I
Sbjct: 916 LVIEKNPENTSAY---INLAKAYEKSGNKSQAISTLEKI 951



 Score = 35.5 bits (81), Expect = 7.5,   Method: Composition-based stats.
 Identities = 11/124 (8%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
            +   ++  D +  + +   A  +    +  KA   + +  +        ++       +
Sbjct: 678 NEFLKNNPNDAQASKTL---AQAYENNGDLLKAENAYEKIIKL----TNTQEDHYKLGII 730

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           ++   KY+ +    ++ I   P+ K      +  G++   + ++        K  ++   
Sbjct: 731 RFKLKKYEHSIESFDQTIKLDPKHKK---ALHNKGIALMMLNKN--------KKAIESFE 779

Query: 164 RIVE 167
           + ++
Sbjct: 780 KAIQ 783


>gi|308497022|ref|XP_003110698.1| hypothetical protein CRE_04860 [Caenorhabditis remanei]
 gi|308242578|gb|EFO86530.1| hypothetical protein CRE_04860 [Caenorhabditis remanei]
          Length = 242

 Score = 39.7 bits (92), Expect = 0.38,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 36/99 (36%), Gaps = 13/99 (13%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
           AV   +G   +   D  ++  ++ R       KA       +F  A  +F       P +
Sbjct: 101 AVALPMGDSSKEPTDEEVEKASEERG------KAQEAFSNGDFDAALTHFTAAIEANPGS 154

Query: 91  G--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
               A+++ ++         +   A +  ++ I+  P+S
Sbjct: 155 AMLHAKRANVLL-----KLKRPISAIADCDKAISINPDS 188


>gi|300869924|ref|YP_003784795.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000]
 gi|300687623|gb|ADK30294.1| TPR domain protein [Brachyspira pilosicoli 95/1000]
          Length = 434

 Score = 39.7 bits (92), Expect = 0.38,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 61/193 (31%), Gaps = 30/193 (15%)

Query: 67  FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
           ++  + ++ A +              + K   +     Y  G+Y  A       I     
Sbjct: 7   YIASEKYNLAIKKLRDILSKNKSHNKSYKIYKIIGDCYYKMGEYPFAIVEYRHAIDTGDN 66

Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
           S           +S  + +  +       +  L     +++      Y            
Sbjct: 67  SPETV-------ISLGRSLNAIGR----KEESLAQFLSLLKL--GGEYKVNVS------- 106

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
                  +EIG+ Y   G+Y  A   F+  L N  D+   +EA+      YV+    +EA
Sbjct: 107 -------IEIGKIYYDNGQYNTAFQFFENALEN--DST-NKEALKYKAYCYVSAGNYNEA 156

Query: 247 REVVSLIQERYPQ 259
             +++ I  +YP 
Sbjct: 157 IVIMNGIINKYPN 169



 Score = 35.5 bits (81), Expect = 9.1,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 29/71 (40%), Gaps = 3/71 (4%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           E   ++     ++ A+++F     +      A K     A+   SAG Y +A  +    I
Sbjct: 108 EIGKIYYDNGQYNTAFQFFENALENDSTNKEALKYK---AYCYVSAGNYNEAIVIMNGII 164

Query: 122 TQYPESKNVDY 132
            +YP    ++Y
Sbjct: 165 NKYPNDPALNY 175


>gi|224532142|ref|ZP_03672774.1| tetratricopeptide repeat domain protein [Borrelia valaisiana VS116]
 gi|224511607|gb|EEF82013.1| tetratricopeptide repeat domain protein [Borrelia valaisiana VS116]
          Length = 1011

 Score = 39.7 bits (92), Expect = 0.38,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 64/182 (35%), Gaps = 34/182 (18%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           ++   +  ++   K++++     + I   P  + ++Y  YL      +         +  
Sbjct: 805 AIYNLSIAKFENNKFEESLETINKAINLNP--EKIEY-LYLKASINLKN--------KNY 853

Query: 156 KLMLQYMSRIVERYTN--SPYVKGARFYVTVGRNQLAAKEVE-------------IGRYY 200
           +  +   + ++ +     S Y+  A+ Y  +G    A   +E             +G  Y
Sbjct: 854 QNAISLYNLVIAKNPENTSAYINLAKAYEKLGNKTQAISTLEKIINKNNKLALNNLGILY 913

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS---LIQERY 257
            K  +Y  AI  F+  + N        EA   L    + +     A++++     ++   
Sbjct: 914 KKEKKYQKAIEIFEKAIIN-----SDIEAKYNLATTLIEINDNARAKDLLKEYTKLKPNN 968

Query: 258 PQ 259
           P+
Sbjct: 969 PE 970



 Score = 38.9 bits (90), Expect = 0.66,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 3/62 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y KA + LK +N+  A   +N      P       + +  A      G   QA S  E+
Sbjct: 840 LYLKASINLKNKNYQNAISLYNLVIAKNPEN---TSAYINLAKAYEKLGNKTQAISTLEK 896

Query: 120 YI 121
            I
Sbjct: 897 II 898


>gi|218781559|ref|YP_002432877.1| rhomboid family protein [Desulfatibacillum alkenivorans AK-01]
 gi|218762943|gb|ACL05409.1| Rhomboid family protein [Desulfatibacillum alkenivorans AK-01]
          Length = 484

 Score = 39.7 bits (92), Expect = 0.38,   Method: Composition-based stats.
 Identities = 17/132 (12%), Positives = 42/132 (31%), Gaps = 33/132 (25%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR---- 212
             L+ +  + +    +P +      +      L      +   Y    EY AA+ R    
Sbjct: 348 EALKLLFLVEKSQPENPSIHKTAARLLAA---LGGDSAAVADVY---REYTAAVKRPALP 401

Query: 213 -------------------FQLVLANY----SDAEHAEEAMARLVEAYVALALMDEAREV 249
                               + ++  +     D      A++ L  AY +  + ++A + 
Sbjct: 402 AGLHLRLVKALARQGLLKEAEKIVGAFLRQKPDEPGVASALSALGHAYKSRGMDEKAAKC 461

Query: 250 VSLIQERYPQGY 261
             +++ +YP+  
Sbjct: 462 FRILERKYPRSQ 473


>gi|149376327|ref|ZP_01894090.1| hypothetical protein MDG893_05329 [Marinobacter algicola DG893]
 gi|149359341|gb|EDM47802.1| hypothetical protein MDG893_05329 [Marinobacter algicola DG893]
          Length = 955

 Score = 39.7 bits (92), Expect = 0.38,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 34/86 (39%), Gaps = 3/86 (3%)

Query: 180 FYVTVGRNQLAAKEVEIGRYYL---KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                 R++LA  E +     +      E   AI  ++ +LA Y +    ++ + +L  A
Sbjct: 86  AKQVAVRHRLADLEFQRAENTMVETAMDEMAGAIEAYEQLLAEYPERPGNDQVLYQLARA 145

Query: 237 YVALALMDEAREVVSLIQERYPQGYW 262
           Y    + DE    ++ +   +P   +
Sbjct: 146 YDLRGMSDEHLATMTTLVNEHPDSKF 171



 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 45/162 (27%), Gaps = 18/162 (11%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML-------- 159
            +Y  A  + E YI   P S      Y++  +           D    K           
Sbjct: 310 EQYTDAIDVFERYIDARPLSPWAPR-YHMRIIDTLAQA-GFTADIPDRKAAFVRDYGIHG 367

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG---RYYLKRGEYVAAIPRFQLV 216
            Y+ +      +    +     +     +LA +   +            Y  A   ++  
Sbjct: 368 AYLQQA-----DDETAQYIGQQLEELIPELANRHYVLAGETEGVESDDHYRQAAVYYEAF 422

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
              +       E +  L E +V LA   EA E    +   +P
Sbjct: 423 ADTFPAHPRTPEMLFLLGETHVELAQWPEAIEAFERVAYDFP 464



 Score = 35.9 bits (82), Expect = 5.7,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 43/132 (32%), Gaps = 17/132 (12%)

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
              Y+QAA   E +   +P       + +L+G ++ ++ +            ++   R+ 
Sbjct: 409 DDHYRQAAVYYEAFADTFPAHPRTPEMLFLLGETHVELAQWP--------EAIEAFERVA 460

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEV------EIGRYYLKRGEYVAAIPRFQLVLANY 220
             +                 + LA +E       E    Y    E+   + R Q  +  +
Sbjct: 461 YDFPWEGEPPERAAEAGYA-SVLAFREYARTWPREPAETYNDYAEFQQ-LNR-QRFVNAF 517

Query: 221 SDAEHAEEAMAR 232
            D   +EE +  
Sbjct: 518 PDDPRSEEVLYI 529



 Score = 35.9 bits (82), Expect = 5.7,   Method: Composition-based stats.
 Identities = 17/116 (14%), Positives = 38/116 (32%), Gaps = 13/116 (11%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           R +  + E A+  +     + A E + Q   ++P      + L   A      G   +  
Sbjct: 102 RAENTMVETAMDEM-----AGAIEAYEQLLAEYPERPGNDQVLYQLARAYDLRGMSDEHL 156

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           +     + ++P+SK      +  G        D+ +  R      Q    +++   
Sbjct: 157 ATMTTLVNEHPDSKFWVEAQFRRG--------DLLFSNRRYAEAEQAFRTVIDADP 204


>gi|115378507|ref|ZP_01465664.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
 gi|310819976|ref|YP_003952334.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca
            DW4/3-1]
 gi|115364476|gb|EAU63554.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
 gi|309393048|gb|ADO70507.1| tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1]
          Length = 1369

 Score = 39.7 bits (92), Expect = 0.38,   Method: Composition-based stats.
 Identities = 17/137 (12%), Positives = 39/137 (28%), Gaps = 22/137 (16%)

Query: 51   VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-- 108
              D + +R +     +F  E  + +A   + +  ++ P             ++ Y  G  
Sbjct: 1248 AADPKRKRVLGAIGDVFFSEGRWDEAIRRYEKALKEAP----------ELTYIYYKIGRA 1297

Query: 109  --KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
              + +Q     + Y        N     Y +G +Y    R         K       + +
Sbjct: 1298 WSEREQPGRAIDWYKKAVTAEPNNAMAQYYLGFAYKAKGRR--------KEATAAFQQYL 1349

Query: 167  ERYTNSPYVKGARFYVT 183
                N+   +     + 
Sbjct: 1350 SLKPNAEDKRDIEDEIA 1366


>gi|17229169|ref|NP_485717.1| hypothetical protein alr1677 [Nostoc sp. PCC 7120]
 gi|17135497|dbj|BAB78043.1| alr1677 [Nostoc sp. PCC 7120]
          Length = 280

 Score = 39.7 bits (92), Expect = 0.38,   Method: Composition-based stats.
 Identities = 22/175 (12%), Positives = 52/175 (29%), Gaps = 35/175 (20%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSV---------TDVRYQREVYEKAVLFLKEQ 71
           K  LTI    A+  +      ++++V +  +         T+     + Y +      + 
Sbjct: 14  KRVLTIGVLTALSAITSVSCSNNKEVLVTEIGVNPPSRRTTNNSQAGQFYVQGQRQHAQG 73

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAF-----VQYSAGKYQQAASLGEEYITQYPE 126
           +   A   +++     P    +      +A+       +  G  Q+A +   E I     
Sbjct: 74  DSQAAIASYDKAIGLDP--DYS------AAYRGRGLAYFDLGDKQKAIADYNEAIRL--- 122

Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
           S N    +   G + A +  +           +   +  +    N  Y +     
Sbjct: 123 SPNDAEAFNSRGNARASLGDNAG--------AITDYNEAIRLSPN--YAEAYNNR 167


>gi|310794486|gb|EFQ29947.1| tetratricopeptide [Glomerella graminicola M1.001]
          Length = 885

 Score = 39.7 bits (92), Expect = 0.38,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 43/140 (30%), Gaps = 22/140 (15%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSA 107
             D    +  Y     ++ +Q + KAYE + Q        P              + Y  
Sbjct: 289 AADQGDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQI 342

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +Y+ A       I   P    +  V+Y +G  Y      +          L    R  E
Sbjct: 343 NQYRDALDAYSRAIRLNP---FISEVWYDLGTLYESCNNQIS-------DALDAYQRAAE 392

Query: 168 RYTNSPYVKGARFYVTVGRN 187
               +P++   +  + + RN
Sbjct: 393 LDPQNPHI---KARLQLLRN 409


>gi|229541486|ref|ZP_04430546.1| Tetratricopeptide TPR_2 repeat protein [Bacillus coagulans 36D1]
 gi|229325906|gb|EEN91581.1| Tetratricopeptide TPR_2 repeat protein [Bacillus coagulans 36D1]
          Length = 503

 Score = 39.7 bits (92), Expect = 0.38,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 78/239 (32%), Gaps = 36/239 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
            + S      D+V       E Y  K V      +  KA +Y  + ++  P+  V     
Sbjct: 2   SKDSKLRQEHDNVLSFVPTGEYYFNKGVQAYDRHDIKKALKYMQRAAQLDPYDPV-IACQ 60

Query: 98  LMSAFVQYSAGKYQQAASLGEEYI-TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
           L   +    A  +++A  +    +    P    +   +Y +  +YA        D     
Sbjct: 61  LAIIYTHCEA--FRKAIDIFRHILAKLDPG---MVECHYFIANNYA--------DLGFFN 107

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGR---------------NQLAAKEVEIGRYYL 201
             L +  + +E      Y + A   + V                   +A +E    R YL
Sbjct: 108 EALYHARKYLELDPFGEYREEAEELIYVLDLEEEDETGAISYEQDELMARQEE--ARRYL 165

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           + G +  A+     ++  Y D   A      +  A   L   ++A EV+  + E+ P  
Sbjct: 166 EAGHFDTALSELHKLIKKYPDFWSAY---NNMALACFYLGQTEKAVEVLMDLLEKNPGN 221


>gi|88602287|ref|YP_502465.1| TPR repeat-containing protein [Methanospirillum hungatei JF-1]
 gi|88187749|gb|ABD40746.1| TPR repeat [Methanospirillum hungatei JF-1]
          Length = 634

 Score = 39.7 bits (92), Expect = 0.38,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 8/82 (9%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y++ +  L+ +N+ +A   F +   + P      ++           G  + A    +  
Sbjct: 34  YDQGLTALENENYEEAISNFLKAVEEDPQN---EQAYSKLGGSYLMTGDVESAIYAFQNV 90

Query: 121 ITQYPES----KNVDYVYYLVG 138
               PE+     N+ Y  YLVG
Sbjct: 91  TNLNPENGVAWGNIGY-LYLVG 111



 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 20/91 (21%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY-------SAGKYQQA 113
           Y K  +++ + + S A   F   +   P            A   Y         G Y +A
Sbjct: 320 YWKGQVYIDQSDRSGAIAEFRTATELNP----------NLADAWYYLGGLLSDEGSYDEA 369

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
            +  ++ I   P   ++   YYL G++  Q+
Sbjct: 370 TTALDKMIELRP---DLADPYYLKGLTQYQL 397


>gi|9294180|dbj|BAB02082.1| peptidylprolyl isomerase; FK506-binding protein [Arabidopsis
           thaliana]
          Length = 555

 Score = 39.7 bits (92), Expect = 0.38,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 52/151 (34%), Gaps = 26/151 (17%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQ----CSRDFPFA-GVARKSL-------LMSAFVQYSAGK 109
           E+     K   +S A + + +       D  F+    +++        L  A  +     
Sbjct: 405 EEGNSKFKGGKYSLASKRYEKAVKFIEYDTSFSEEEKKQAKALKVACNLNDAACKLKLKD 464

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y+QA  L  + +    ES NV    Y    +Y ++  D+   +   K  L       E  
Sbjct: 465 YKQAEKLCTKVLEL--ESTNVK-ALYRRAQAYMELS-DLDLAEFDVKKAL-------EID 513

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
            N+  VK  +  +     +   KE    ++Y
Sbjct: 514 PNNREVKLEQKRLKEKMKEFNKKE---AKFY 541


>gi|197313662|ref|NP_001127890.1| prolyl 3-hydroxylase 2 isoform b [Homo sapiens]
 gi|7022921|dbj|BAA91769.1| unnamed protein product [Homo sapiens]
 gi|13477143|gb|AAH05029.1| LEPREL1 protein [Homo sapiens]
 gi|119598516|gb|EAW78110.1| leprecan-like 1, isoform CRA_b [Homo sapiens]
 gi|119598517|gb|EAW78111.1| leprecan-like 1, isoform CRA_b [Homo sapiens]
 gi|325463975|gb|ADZ15758.1| leprecan-like 1 [synthetic construct]
          Length = 527

 Score = 39.7 bits (92), Expect = 0.38,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 6/68 (8%)

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           F  Y  G+Y +A    + Y+  +P+ ++V     L  + Y + + D   D  A+    + 
Sbjct: 133 FAYYRVGEYVKALECAKAYLLCHPDDEDV-----LDNVDYYESLLDDSIDP-ASIEARED 186

Query: 162 MSRIVERY 169
           ++  V+R+
Sbjct: 187 LTMFVKRH 194


>gi|71650193|ref|XP_813799.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70878718|gb|EAN91948.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 703

 Score = 39.7 bits (92), Expect = 0.38,   Method: Composition-based stats.
 Identities = 25/189 (13%), Positives = 54/189 (28%), Gaps = 41/189 (21%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++ + + K+ ++ +A + ++   R  P      K+L    F       Y  A    E  +
Sbjct: 270 QRGLAYRKKGDYLRAIDEYSAALRLDPKNF---KALFNRGFCSDKVEDYNAAIRDYEAAM 326

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              P      Y Y     +Y  +           K  +    + +   +N+         
Sbjct: 327 KLEPG-----YAY-----TYYNLGISYDRWGGHYKEAIAMFDKAIALDSNN--------- 367

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAY 237
                            +Y  RG     + +++  + +Y+ A        +A       Y
Sbjct: 368 ---------------ADFYHNRGFSQRKLGKYREAVEDYTMALSLDPQHFKAYYNRAFCY 412

Query: 238 VALALMDEA 246
             L     A
Sbjct: 413 DKLGEGANA 421



 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 32/237 (13%), Positives = 68/237 (28%), Gaps = 55/237 (23%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA----- 107
           D +  + ++ +     K ++++ A   +    +  P            A+  Y+      
Sbjct: 295 DPKNFKALFNRGFCSDKVEDYNAAIRDYEAAMKLEPG----------YAYTYYNLGISYD 344

Query: 108 ---GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
              G Y++A ++ ++ I    +S N D+ Y+  G S               +  ++  + 
Sbjct: 345 RWGGHYKEAIAMFDKAIAL--DSNNADF-YHNRGFS--------QRKLGKYREAVEDYTM 393

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY-------------YLKRGEYVAAIP 211
            +           A +      ++L      I  Y             Y  RG  +    
Sbjct: 394 ALSLDPQH---FKAYYNRAFCYDKLGEGANAIADYTKAIAIQDDNPNAYHNRGAAMEKAG 450

Query: 212 RFQLVLANY-------SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           R    +A+Y               A      AY      D A + ++      P   
Sbjct: 451 RLDDAIADYTRAIQLDDGNPFTYNARGI---AYDRRGKSDAALQDLTQAIALSPNNP 504


>gi|332846934|ref|XP_001173695.2| PREDICTED: cell division cycle protein 27 homolog isoform 1 [Pan
           troglodytes]
          Length = 763

 Score = 39.7 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 525 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 574

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178
           N    +Y +GM Y +  +     +   +  L    +          +      S      
Sbjct: 575 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 630

Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                V   +N L               +Y +A+   + +                + + 
Sbjct: 631 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 685

Query: 237 YVALALMDEA 246
           Y  L     A
Sbjct: 686 YKKLGQTHLA 695


>gi|332243161|ref|XP_003270751.1| PREDICTED: cell division cycle protein 27 homolog isoform 3
           [Nomascus leucogenys]
          Length = 763

 Score = 39.7 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 525 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 574

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178
           N    +Y +GM Y +  +     +   +  L    +          +      S      
Sbjct: 575 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 630

Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                V   +N L               +Y +A+   + +                + + 
Sbjct: 631 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 685

Query: 237 YVALALMDEA 246
           Y  L     A
Sbjct: 686 YKKLGQTHLA 695


>gi|311267004|ref|XP_003131357.1| PREDICTED: cell division cycle protein 27 homolog, partial [Sus
           scrofa]
          Length = 741

 Score = 39.7 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 503 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 552

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178
           N    +Y +GM Y +  +     +   +  L    +          +      S      
Sbjct: 553 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 608

Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                V   +N L               +Y +A+   + +                + + 
Sbjct: 609 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 663

Query: 237 YVALALMDEA 246
           Y  L     A
Sbjct: 664 YKKLGQTHLA 673


>gi|297530018|ref|YP_003671293.1| hypothetical protein GC56T3_1717 [Geobacillus sp. C56-T3]
 gi|297253270|gb|ADI26716.1| TPR repeat-containing protein [Geobacillus sp. C56-T3]
          Length = 1385

 Score = 39.7 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 3/68 (4%)

Query: 63   KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
            +AV++L+E    KA     +   + P   +AR++L++        G+YQ+AA+L E Y  
Sbjct: 1239 QAVVWLQEGQHEKAERQLEEIVAEDP---LAREALMLLGEQYMETGRYQEAAALWERYAD 1295

Query: 123  QYPESKNV 130
             YPE + +
Sbjct: 1296 WYPEDEEL 1303


>gi|294055970|ref|YP_003549628.1| Tetratricopeptide TPR_4 [Coraliomargarita akajimensis DSM 45221]
 gi|293615303|gb|ADE55458.1| Tetratricopeptide TPR_4 [Coraliomargarita akajimensis DSM 45221]
          Length = 876

 Score = 39.7 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 56/185 (30%), Gaps = 20/185 (10%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           KA L ++  +     +        +  +  A +S L  A    +AG  + A         
Sbjct: 591 KAELLIRSGDADGGRKVLESLRVGYASSAAAERSYLREANFYSAAGNLEAAQQTLLVLAD 650

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
            Y ES       Y  G+                   ++ +SR+ E Y     V  A+   
Sbjct: 651 TYSESPLASQAIYEAGL------LGERRGVEHYADAVRILSRLAETYPEDALVFPAQLKQ 704

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
                 +               ++  A   ++ ++  Y +      AM    +  +ALA 
Sbjct: 705 ADLLRLM--------------NDFSGAQIIYENLINRYPEHPLLYIAMLSRADCMLALAR 750

Query: 243 MDEAR 247
            D AR
Sbjct: 751 NDLAR 755



 Score = 38.9 bits (90), Expect = 0.83,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 73/217 (33%), Gaps = 31/217 (14%)

Query: 58  REVYEKAVLFLKEQ--NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           + +YE  +L  +    +++ A    ++ +  +P   +   + L  A +      +  A  
Sbjct: 660 QAIYEAGLLGERRGVEHYADAVRILSRLAETYPEDALVFPAQLKQADLLRLMNDFSGAQI 719

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
           + E  I +YPE        Y+  +S A  +  +  +  A    L+  S ++ER       
Sbjct: 720 IYENLINRYPEHPL----LYIAMLSRADCMLALARNDLA---RLEDASLVLER------- 765

Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA-------IPRF----QLVLANYSDAE 224
                 + +     AA +        +R  + AA         RF    + V+       
Sbjct: 766 LLDLPGLPLDVQAEAAYKWAFAL--QRREMWDAAQEVYGLLSDRFLLNAENVVQLGPTGR 823

Query: 225 H-AEEAMARLVEAYVALALMDEARE-VVSLIQERYPQ 259
           +    AM  L E        +EAR     +I    P 
Sbjct: 824 YWVSRAMLDLGELLQNNGDAEEARRVYRKIIAYNLPG 860


>gi|282897129|ref|ZP_06305131.1| TPR repeat protein [Raphidiopsis brookii D9]
 gi|281197781|gb|EFA72675.1| TPR repeat protein [Raphidiopsis brookii D9]
          Length = 1279

 Score = 39.7 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 34/245 (13%), Positives = 66/245 (26%), Gaps = 68/245 (27%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQ-CS--------------RDFPFAG-------- 91
            Y    Y + + +    N+  A + + +                   +            
Sbjct: 679 DYADAYYNRGIAYYDLGNYQSAIDDYTRSIEIKPNCADTYVGRGTALYKLGDSQGAINDF 738

Query: 92  -VARKSLLMSAFVQ-------YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
             A       A          Y  G YQ A +     +   P   N    Y   G+   +
Sbjct: 739 HHALDIDASYADAYNNRGIVRYELGDYQGAINDFNHALNINP---NYAQAYNNRGIVRYE 795

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY---- 199
           +        R  +  ++  +  V    NS Y +       + R  L  +++ I  +    
Sbjct: 796 L--------RDNQGAMEDFNHAVNI--NSNYAQAYNNR-GIVRICLGERQLAIEDFSQAI 844

Query: 200 ---YLKRGEYVAAIPRF---------QLVLANYSDA----EHAEEAMARLVEAYVALALM 243
              Y     Y   I R          Q  + +++ A     +  +A      AY  L   
Sbjct: 845 IIAYNYTESY---INRGYARYELGNRQKAIEDFNQALNINPNYAQAYNNRGVAYTDLGDR 901

Query: 244 DEARE 248
           + A++
Sbjct: 902 EWAKD 906



 Score = 35.5 bits (81), Expect = 8.7,   Method: Composition-based stats.
 Identities = 19/143 (13%), Positives = 43/143 (30%), Gaps = 27/143 (18%)

Query: 38  WERQSSRDVYLDSVTDV----RYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
                 +   +++ T          E Y  + +   +  +   A + + Q     P    
Sbjct: 589 CSELGDKPGAVNNYTQALNINPDDPETYIARGLTRSELGDNQGAIDDYTQALNLNP---- 644

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE----SKNVDYVYYLVGMSYAQMIRDV 148
                   A++  + G  +   +  +  I  Y +    S +    YY  G++Y       
Sbjct: 645 ------DYAYIYNNRGVVRSDIADYQRAIDDYTQALNISPDYADAYYNRGIAYY------ 692

Query: 149 PYDQRATKLMLQYMSRIVERYTN 171
             D    +  +   +R +E   N
Sbjct: 693 --DLGNYQSAIDDYTRSIEIKPN 713


>gi|237809814|ref|YP_002894254.1| peptidase C39 bacteriocin processing [Tolumonas auensis DSM 9187]
 gi|237502075|gb|ACQ94668.1| peptidase C39 bacteriocin processing [Tolumonas auensis DSM 9187]
          Length = 463

 Score = 39.7 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 30/78 (38%), Gaps = 7/78 (8%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           ++  V    +TD+    + Y+ A   L+    +KA E F       P +  A    L   
Sbjct: 44  ANGSVISSELTDLSAALQQYKTAHDPLQ----TKAIEGF---LNSHPHSAWANSLWLNLG 96

Query: 102 FVQYSAGKYQQAASLGEE 119
            +   AG+Y  A    ++
Sbjct: 97  LIYQQAGRYSDALQAYDK 114


>gi|194384564|dbj|BAG59442.1| unnamed protein product [Homo sapiens]
          Length = 763

 Score = 39.7 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 525 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 574

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178
           N    +Y +GM Y +  +     +   +  L    +          +      S      
Sbjct: 575 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 630

Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                V   +N L               +Y +A+   + +                + + 
Sbjct: 631 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 685

Query: 237 YVALALMDEA 246
           Y  L     A
Sbjct: 686 YKKLGQTHLA 695


>gi|158338735|ref|YP_001519912.1| hypothetical protein AM1_5643 [Acaryochloris marina MBIC11017]
 gi|158308976|gb|ABW30593.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
          Length = 2092

 Score = 39.7 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 5/72 (6%)

Query: 50   SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD---FPFAGVARKSLLMSAFVQYS 106
                 R   ++ E+     ++ N++ A  ++ Q +      P A  + +S L  A+  Y 
Sbjct: 1279 QGESSRTLPKLLEEGRQAYQQANYADAVVHWTQAATQLSKHPDAYASVQSHLALAY-HYL 1337

Query: 107  AGKYQQAASLGE 118
             G ++QA S  E
Sbjct: 1338 -GDWEQARSAIE 1348


>gi|148706199|gb|EDL38146.1| ubiquitously transcribed tetratricopeptide repeat gene, Y
           chromosome, isoform CRA_b [Mus musculus]
          Length = 1221

 Score = 39.7 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 18/140 (12%), Positives = 35/140 (25%), Gaps = 42/140 (30%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A +  ++  
Sbjct: 111 EDYSKALSSYQRYYSL-----QTDYWKNAAFLYGLGLVYFYY--------NAFQWAIRAF 157

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKE------------------------VEIGR 198
             ++    N    K     +          E                          I  
Sbjct: 158 QEVLYVDPNFCRAKEIHLRLGFMFKMNTDYESSLKHFQLALIDCNVCTLSSVEIQFHIAH 217

Query: 199 YYLKRGEYVAAIPRFQLVLA 218
            Y  + +Y +A   ++ +L 
Sbjct: 218 LYETQRKYHSAKAAYEQLLQ 237


>gi|138896655|ref|YP_001127108.1| TPR repeat-containing protein [Geobacillus thermodenitrificans
           NG80-2]
 gi|134268168|gb|ABO68363.1| TPR-repeat-containing protein [Geobacillus thermodenitrificans
           NG80-2]
          Length = 432

 Score = 39.7 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 17/115 (14%), Positives = 41/115 (35%), Gaps = 15/115 (13%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           E+A   L+++ F++A E        +P  ++          A   +  G  ++A     E
Sbjct: 97  ERARHLLEQERFAEAIEALEAIVSRYPEFWSAHN-----NLALAYFYNGDVERAKQKLLE 151

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
            + + P +        L  +  A +     +DQ     + + ++ +   +    Y
Sbjct: 152 VLKRDPGN--------LHALCNALVFAYYLHDQEEVAALCETLASVYPFFREHQY 198


>gi|110665738|ref|NP_033510.2| histone demethylase UTY [Mus musculus]
 gi|147897749|gb|AAI40404.1| Ubiquitously transcribed tetratricopeptide repeat gene, Y
           chromosome [synthetic construct]
 gi|148706198|gb|EDL38145.1| ubiquitously transcribed tetratricopeptide repeat gene, Y
           chromosome, isoform CRA_a [Mus musculus]
          Length = 1212

 Score = 39.7 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 18/140 (12%), Positives = 35/140 (25%), Gaps = 42/140 (30%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A +  ++  
Sbjct: 102 EDYSKALSSYQRYYSL-----QTDYWKNAAFLYGLGLVYFYY--------NAFQWAIRAF 148

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKE------------------------VEIGR 198
             ++    N    K     +          E                          I  
Sbjct: 149 QEVLYVDPNFCRAKEIHLRLGFMFKMNTDYESSLKHFQLALIDCNVCTLSSVEIQFHIAH 208

Query: 199 YYLKRGEYVAAIPRFQLVLA 218
            Y  + +Y +A   ++ +L 
Sbjct: 209 LYETQRKYHSAKAAYEQLLQ 228


>gi|118371952|ref|XP_001019174.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89300941|gb|EAR98929.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 772

 Score = 39.7 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 78/243 (32%), Gaps = 64/243 (26%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFP------------FA---------GVARKS-L 97
           +Y  A ++L+  N+S A E  N   R FP            ++           ++KS  
Sbjct: 515 LYSLAKVYLETFNYSNAIEILNTLVRLFPSNDLYLATLALAYSEIKDEQKVMEFSQKSLQ 574

Query: 98  LM---------SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
           +           A+  +   + Q A    +  I   P +      Y+     Y   I   
Sbjct: 575 INPQNILALNCLAYYYFLKQQNQLAIQCLQSSIKVNPCNFR---AYF-----YQAQILLS 626

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYV-----------KGARFYVTVGRNQLAAKEV--- 194
                   L  +Y  +   ++ N+ ++             A  Y        A  E+   
Sbjct: 627 EGKHEDAILSAKYSMQQNSKFPNAQFLLGQVFEQIGKMDKAIKYFQEAIMIQAKYELPYI 686

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
           ++ + Y K+G+Y  A+   +L L N   +           + Y  L  + E ++ +S   
Sbjct: 687 DLSQIYRKKGQYDDALFICKLALQNNIKS----------AKIYNELGKIYEKKQYLSQ-A 735

Query: 255 ERY 257
             Y
Sbjct: 736 INY 738



 Score = 38.9 bits (90), Expect = 0.77,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 67/190 (35%), Gaps = 47/190 (24%)

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE--SKNVD 131
            +A  Y    ++++P++      +L      +    Y+ A +  ++ I   P   S    
Sbjct: 434 KEAISY----NQNYPYS------ILQIGKCYFKKKMYEDAITSFKQVIKLLPTIFSP--- 480

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
             YY +G+ Y +      +DQ      + Y ++ +E   NS             +N L  
Sbjct: 481 --YYCLGIIYYER---SEFDQ-----SISYFNKALEL--NSSN-----------QNCL-- 515

Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE-VV 250
               + + YL+   Y  AI     ++  +   +     +A L  AY  +    +  E   
Sbjct: 516 --YSLAKVYLETFNYSNAIEILNTLVRLFPSNDLY---LATLALAYSEIKDEQKVMEFSQ 570

Query: 251 SLIQERYPQG 260
             +Q   PQ 
Sbjct: 571 KSLQIN-PQN 579



 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 14/123 (11%), Positives = 41/123 (33%), Gaps = 18/123 (14%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKY 110
           +  Y   + +    + K++ +  A   F Q  +  P  F+            + Y   ++
Sbjct: 440 NQNYPYSILQIGKCYFKKKMYEDAITSFKQVIKLLPTIFSPY-----YCLGIIYYERSEF 494

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
            Q+ S   + +     ++N     Y +   Y +               ++ ++ +V  + 
Sbjct: 495 DQSISYFNKALELNSSNQN---CLYSLAKVYLETFNYSN--------AIEILNTLVRLFP 543

Query: 171 NSP 173
           ++ 
Sbjct: 544 SND 546



 Score = 36.2 bits (83), Expect = 5.4,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 68/181 (37%), Gaps = 27/181 (14%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           Q E++++A   +    + +A     +  +         + L +         + +++ S+
Sbjct: 308 QTELFQQAQKEIDNHKYQEAQVTLERLVKI---NTHNDQYLALLGLTHLEQYQCEESRSI 364

Query: 117 GEEYITQYPESKN----VDYVYYLV-----GMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            ++ ++  P+++     + Y YY        M Y Q  + +  + +  +  L Y + ++ 
Sbjct: 365 SQKCLSINPKNEIALSCMGYYYYEKNDLKQAMCYLQ--KCLNLNPKNYR-ALTYKAFVLS 421

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKE------VEIGRYYLKRGEYVAAIPRFQLVLANYS 221
                   +     +   +  ++  +      ++IG+ Y K+  Y  AI  F+ V+    
Sbjct: 422 N------QQKLDEELLTLKEAISYNQNYPYSILQIGKCYFKKKMYEDAITSFKQVIKLLP 475

Query: 222 D 222
            
Sbjct: 476 T 476


>gi|73965118|ref|XP_860014.1| PREDICTED: similar to Cell division cycle protein 27 homolog
           (CDC27Hs) (H-NUC) isoform 5 [Canis familiaris]
          Length = 764

 Score = 39.7 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 526 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 575

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178
           N    +Y +GM Y +  +     +   +  L    +          +      S      
Sbjct: 576 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 631

Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                V   +N L               +Y +A+   + +                + + 
Sbjct: 632 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 686

Query: 237 YVALALMDEA 246
           Y  L     A
Sbjct: 687 YKKLGQTHLA 696


>gi|74216250|dbj|BAE25094.1| unnamed protein product [Mus musculus]
          Length = 1149

 Score = 39.7 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 18/140 (12%), Positives = 35/140 (25%), Gaps = 42/140 (30%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A +  ++  
Sbjct: 39  EDYSKALSSYQRYYSL-----QTDYWKNAAFLYGLGLVYFYY--------NAFQWAIRAF 85

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKE------------------------VEIGR 198
             ++    N    K     +          E                          I  
Sbjct: 86  QEVLYVDPNFCRAKEIHLRLGFMFKMNTDYESSLKHFQLALIDCNVCTLSSVEIQFHIAH 145

Query: 199 YYLKRGEYVAAIPRFQLVLA 218
            Y  + +Y +A   ++ +L 
Sbjct: 146 LYETQRKYHSAKAAYEQLLQ 165


>gi|6175094|sp|P79457|UTY_MOUSE RecName: Full=Histone demethylase UTY; AltName: Full=Male-specific
           histocompatibility antigen H-YDB; AltName:
           Full=Ubiquitously transcribed TPR protein on the Y
           chromosome; AltName: Full=Ubiquitously transcribed Y
           chromosome tetratricopeptide repeat protein
 gi|3786392|gb|AAC67385.1| male-specific histocompatibility antigen H-YDb [Mus musculus]
          Length = 1212

 Score = 39.7 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 18/140 (12%), Positives = 35/140 (25%), Gaps = 42/140 (30%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A +  ++  
Sbjct: 102 EDYSKALSSYQRYYSL-----QTDYWKNAAFLYGLGLVYFYY--------NAFQWAIRAF 148

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKE------------------------VEIGR 198
             ++    N    K     +          E                          I  
Sbjct: 149 QEVLYVDPNFCRAKEIHLRLGFMFKMNTDYESSLKHFQLALIDCNVCTLSSVEIQFHIAH 208

Query: 199 YYLKRGEYVAAIPRFQLVLA 218
            Y  + +Y +A   ++ +L 
Sbjct: 209 LYETQRKYHSAKAAYEQLLQ 228


>gi|1835147|emb|CAA70422.1| male-specific histocompatibility antigen H-YDb [Mus musculus]
          Length = 1186

 Score = 39.7 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 18/140 (12%), Positives = 35/140 (25%), Gaps = 42/140 (30%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A +  ++  
Sbjct: 102 EDYSKALSSYQRYYSL-----QTDYWKNAAFLYGLGLVYFYY--------NAFQWAIRAF 148

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKE------------------------VEIGR 198
             ++    N    K     +          E                          I  
Sbjct: 149 QEVLYVDPNFCRAKEIHLRLGFMFKMNTDYESSLKHFQLALIDCNVCTLSSVEIQFHIAH 208

Query: 199 YYLKRGEYVAAIPRFQLVLA 218
            Y  + +Y +A   ++ +L 
Sbjct: 209 LYETQRKYHSAKAAYEQLLQ 228


>gi|304407284|ref|ZP_07388937.1| TPR repeat-containing protein [Paenibacillus curdlanolyticus YK9]
 gi|304343725|gb|EFM09566.1| TPR repeat-containing protein [Paenibacillus curdlanolyticus YK9]
          Length = 587

 Score = 39.7 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 24/57 (42%), Gaps = 5/57 (8%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           ++A + L+E  F++A +   +     P F+     +    A   Y  G++ +A    
Sbjct: 160 DQARILLEEGKFAQAVKLLEEIVEQHPEFSA----ARNNLALAFYYMGQFDRAMQTI 212


>gi|110669299|ref|YP_659110.1| TPR repeat-containing protein [Haloquadratum walsbyi DSM 16790]
 gi|109627046|emb|CAJ53522.1| tetratricopeptide repeat protein [Haloquadratum walsbyi DSM 16790]
          Length = 246

 Score = 39.7 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 11/109 (10%), Positives = 32/109 (29%), Gaps = 17/109 (15%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
            K     + + + +A   + +      +   +  A  +    A+  + AG+ + A    E
Sbjct: 105 NKGAAHGQLEEWDEAIGSYKEALHIDDE---SEHAASAETNLAYALWEAGETESALQHAE 161

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
             +   P        +Y  G           +++   +  +      + 
Sbjct: 162 RAVKVDPRFPQ---AWYNRG--------FFLHERGLNEEAVSAFDNAIR 199


>gi|39995514|ref|NP_951465.1| TPR domain protein [Geobacter sulfurreducens PCA]
 gi|39982277|gb|AAR33738.1| TPR domain protein [Geobacter sulfurreducens PCA]
          Length = 748

 Score = 39.7 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 43/121 (35%), Gaps = 24/121 (19%)

Query: 132 YV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
           Y    Y   +  A+ + D    ++A           VER+   P+V          R +L
Sbjct: 541 YAPELYRRILHDAEQLGDPTLMEKAAG-------EFVERFPAHPWV----QRF---REEL 586

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           AA E         RG++   + R   +LA+        E++  L ++  A     +A   
Sbjct: 587 AAVE-------YNRGDFQRVVGRLSGMLAS-GTRPEYAESLYYLGKSLDASGNRRDAERA 638

Query: 250 V 250
           +
Sbjct: 639 M 639


>gi|45357839|ref|NP_987396.1| hypothetical protein MMP0276 [Methanococcus maripaludis S2]
 gi|45047399|emb|CAF29832.1| Conserved hypothetical protein [Methanococcus maripaludis S2]
          Length = 344

 Score = 39.7 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 37/120 (30%), Gaps = 14/120 (11%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D + +  +  K   +LK QN+  A E FN      P +          A        ++ 
Sbjct: 191 DEKMETALLGKGNSYLKLQNYESAIECFNTAETINPKSEYPP---YYKADAYRDTENFEY 247

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A    +E +   P + ++       G+   +M        +     +      ++    +
Sbjct: 248 ALKYYDEALEINPSNSDI---LISKGICLDKM--------KNYSAAISNFDLAIQLDPKN 296



 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 45/161 (27%), Gaps = 37/161 (22%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           Y K     K   + K+ + +N+                +LL           Y+ A    
Sbjct: 165 YNKGETQFKLGEYEKSIDSYNKALLIDEK------METALLGKGNSYLKLQNYESAIECF 218

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
               T  P+S+   Y              D   D    +  L+Y    +E   ++  +  
Sbjct: 219 NTAETINPKSEYPPY-----------YKADAYRDTENFEYALKYYDEALEINPSNSDILI 267

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
           ++    +  +              K   Y AAI  F L + 
Sbjct: 268 SK---GICLD--------------KMKNYSAAISNFDLAIQ 291


>gi|330840667|ref|XP_003292333.1| hypothetical protein DICPUDRAFT_99304 [Dictyostelium purpureum]
 gi|325077432|gb|EGC31145.1| hypothetical protein DICPUDRAFT_99304 [Dictyostelium purpureum]
          Length = 548

 Score = 39.7 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 30/73 (41%), Gaps = 5/73 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y   V+++K  N+  A +YFN+   +D         S  M     +  G    A    +E
Sbjct: 39  YNIGVMYIKSNNYRSAIDYFNRSIEQD----KYLAASYFMRGVAHHLGGDLNHAIVDYDE 94

Query: 120 YITQYPESKNVDY 132
            +++    + +DY
Sbjct: 95  TVSKLRGHEYIDY 107


>gi|307718566|ref|YP_003874098.1| hypothetical protein STHERM_c08780 [Spirochaeta thermophila DSM
           6192]
 gi|306532291|gb|ADN01825.1| hypothetical protein STHERM_c08780 [Spirochaeta thermophila DSM
           6192]
          Length = 305

 Score = 39.7 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 30/95 (31%), Gaps = 13/95 (13%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L     + +  +         D+              +     +  E +FS+A E + Q 
Sbjct: 6   LVPAAILCLLVVTSCASSPRPDL----------AEAYFSLGNAYYDEGDFSRAVEAYTQA 55

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
            R   F+    +     A      G+Y +A +L E
Sbjct: 56  LR---FSPHTPRIEYNLARTYIRMGEYDRAEALLE 87


>gi|228472629|ref|ZP_04057389.1| tetratricopeptide repeat domain protein [Capnocytophaga gingivalis
           ATCC 33624]
 gi|228276042|gb|EEK14798.1| tetratricopeptide repeat domain protein [Capnocytophaga gingivalis
           ATCC 33624]
          Length = 918

 Score = 39.7 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 44/135 (32%), Gaps = 19/135 (14%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +     ++  +++A       +   P       ++        +  +Y +A    E  
Sbjct: 384 YNRGQQLAQQGRYTEAIPDLQWVAAQ-PSFEWREDAIAALYGAYLNNHQYGKALEQAELL 442

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV-------ERYTNSP 173
           I QYP+SK      YL   +    +R  P         L+   +++         +  S 
Sbjct: 443 IQQYPQSKGG----YLRKAAALSALRQYP-------QALEIYEKLIGESDAKDNDFYISG 491

Query: 174 YVKGARFYVTVGRNQ 188
           Y + A  Y+     +
Sbjct: 492 YEETALAYIKYLNEK 506



 Score = 36.6 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 64/176 (36%), Gaps = 37/176 (21%)

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           K  L      +  G+Y++A  L ++ ITQYP++ ++   +Y+   +Y    +D       
Sbjct: 24  KKELKLIDSYFKEGQYEEAKKLLDKNITQYPKNGDIQ--FYMG--TYYYQKQDND----- 74

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
                 ++ R ++   N              +  LA+ E         +  Y +AI    
Sbjct: 75  --KARYHLLRALDELPNH----------VAAKEILASIE-------TTQKHYSSAICYVN 115

Query: 215 LVLANYS-DAEHAEE--AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
            +L     DAE   +  A+ RL           EA  ++  I+  YPQ    +   
Sbjct: 116 ELLETRPYDAELWRKKIALYRLQ------GNDIEANRLLKRIRVIYPQDEQFKKDY 165



 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 42/109 (38%), Gaps = 17/109 (15%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ---LAAKEVEIGRYYLKRGEYVAAIPR 212
           K   + +  +  +Y N         Y+    N+   LA            +G Y  AIP 
Sbjct: 356 KEAYKVLEELFSKYPN--DADIRNNYLQYRYNRGQQLAQ-----------QGRYTEAIPD 402

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            Q V A     E  E+A+A L  AY+      +A E   L+ ++YPQ  
Sbjct: 403 LQWVAAQ-PSFEWREDAIAALYGAYLNNHQYGKALEQAELLIQQYPQSK 450


>gi|47222450|emb|CAG12970.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 788

 Score = 39.7 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 42/214 (19%), Positives = 65/214 (30%), Gaps = 56/214 (26%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
            L   +V    G Y +A    + +         +    Y  GM+Y +       D +   
Sbjct: 56  ELAIGYVLIGNGLYDEAI---KHFSLLLQGDPELVSAIYGRGMAYGKKSLQ---DIKNAD 109

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVT----VGRNQLAAKEVEI-----GRYYLKRG--- 204
           L L  ++R++    N P V   R  +          LA     I      R Y  RG   
Sbjct: 110 LALYELNRVITLEPNWPEVYEQRAEILSPLGRISEALADLSKAIQLQPSARLYRHRGTLL 169

Query: 205 ----EYVAAIPRFQLVLANYSDAEHA---------------------EEAMAR------- 232
               +YVAA+  FQ  L    +   A                     +EA+         
Sbjct: 170 FISEDYVAAMEDFQQSLELKKNQPIAMLYKGLTFFHRGLLKEAIETFKEALKLKSDFIDA 229

Query: 233 ---LVEAYVALALMDEAREVVS---LIQERYPQG 260
              L +AY  L   + A E      L+ + + Q 
Sbjct: 230 YKSLGQAYRELGDFESAMESFQRALLLDQNHIQS 263


>gi|17231874|ref|NP_488422.1| hypothetical protein all4382 [Nostoc sp. PCC 7120]
 gi|17133518|dbj|BAB76081.1| all4382 [Nostoc sp. PCC 7120]
          Length = 311

 Score = 39.7 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 45/154 (29%), Gaps = 20/154 (12%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE------VYEKAVLFLKEQNFSKAYEYFN 81
           F++A   L G   + +     +       + E       Y   ++  ++QN+  A   F 
Sbjct: 112 FALAFANLGGSLLEGNNLQQANDYLQRALELEPRLGFAHYNLGLVRQQQQNWEGAIASFQ 171

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
           +       +  A +            GK  +A +   + I   P        YY +G+  
Sbjct: 172 KAVEL---SKNAPEPHYYLGISYLQQGKLNEAKNAFNQAIKINPRYSE---AYYNLGVVL 225

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
                     Q   +  L    +  E   N P  
Sbjct: 226 FN--------QGQPQEALTAFRKSAEANPNYPNA 251


>gi|89072370|ref|ZP_01158949.1| hypothetical protein SKA34_06340 [Photobacterium sp. SKA34]
 gi|89051902|gb|EAR57354.1| hypothetical protein SKA34_06340 [Photobacterium sp. SKA34]
          Length = 683

 Score = 39.7 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 17/128 (13%), Positives = 40/128 (31%), Gaps = 33/128 (25%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++A     +  + +A + F            + +        +Y A  Y QA    +   
Sbjct: 345 QQAYQTYTDGKYKQAAQDFE-----------SPQWK---GIAEYKAKNYAQAIETLK--- 387

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              P   ++    Y +G +YAQ            +  +    ++ +   N P     +  
Sbjct: 388 ---PLHDSMS--QYNLGNAYAQS--------GKLQQAVDTYEKLQKADPNYP---DVKKN 431

Query: 182 VTVGRNQL 189
           + + +  L
Sbjct: 432 LDIVKKAL 439


>gi|225873528|ref|YP_002754987.1| tetratricopeptide repeat protein [Acidobacterium capsulatum ATCC
           51196]
 gi|225794548|gb|ACO34638.1| tetratricopeptide repeat protein [Acidobacterium capsulatum ATCC
           51196]
          Length = 300

 Score = 39.7 bits (92), Expect = 0.40,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 39/116 (33%), Gaps = 19/116 (16%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           +AV   +  N  +A   +       P    A  + +    + Y    Y +A         
Sbjct: 141 EAVQCEEAGNIDEAVALYEAILAQAPG--HAPSA-INLGTIYYHRKDYARA-------ER 190

Query: 123 QYPESKNVD--YVYYLVGMSYAQMIRDVPYDQRATK--LMLQYMSRIVERYTNSPY 174
            Y  +   D  Y      +++  +   +   QR T+     Q   R+V RY ++ Y
Sbjct: 191 LYRGATEADPNYA-----LAFFDLGNVLDELQRMTEAIEAYQAAIRLVPRYADAHY 241


>gi|113474480|ref|YP_720541.1| hypothetical protein Tery_0626 [Trichodesmium erythraeum IMS101]
 gi|110165528|gb|ABG50068.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101]
          Length = 2059

 Score = 39.7 bits (92), Expect = 0.40,   Method: Composition-based stats.
 Identities = 39/263 (14%), Positives = 82/263 (31%), Gaps = 74/263 (28%)

Query: 62   EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ--YSAGKYQQAASLGEE 119
            +K  + +    F +A   F +    FP      +      + +  +S   +  A    E 
Sbjct: 1213 QKGNMLINLSRFDEAESVFQRLIEKFP-----HQPQGYDGYARLTHSFADWNLALKRWEN 1267

Query: 120  YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
             I ++PE          +G  +     ++  +            R++E++ + P      
Sbjct: 1268 AIEKFPEH---------IG--FQTQKGNMLINLSRFDEAESVFQRLIEKFPHQPQGYEGY 1316

Query: 180  FYVTVGRNQLAAKEVEIGR-------------YYLKRGE-------YVAAIPRFQLVLAN 219
              +    N L   E+ + R             +Y+++G        Y  A   F+ +++ 
Sbjct: 1317 ARLA---NHLGNWELALKRWENAINHLPHHFHFYVQKGNVLITLFRYQEAETLFEELISK 1373

Query: 220  YSDAEHAEEAMARL-------------------------------VEAYVALALMDEARE 248
            Y    H  + +AR+                                 AY+ L   D A++
Sbjct: 1374 YPHQHHGYDGLARVLMHAQKWELALTCWQTAMDKFPNNLVFLVGKANAYIELHKFDSAQD 1433

Query: 249  VVSLIQERYPQGYWARYVETLVK 271
            +   I  +YP   + +    L K
Sbjct: 1434 LADRIFRQYPN--YYQQKYGLQK 1454



 Score = 35.9 bits (82), Expect = 6.3,   Method: Composition-based stats.
 Identities = 27/199 (13%), Positives = 64/199 (32%), Gaps = 38/199 (19%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ--YSAGKYQQAASLGEE 119
           +K  + +    F +A   F +    FP      +      + +  Y    +  A    E 
Sbjct: 329 QKGNILINLSRFDEAESVFQRLIEKFP-----HQPQGYDGYAKLTYRFADWNLALKRWEN 383

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            I ++P  +N+ +     G     + R                 R++E++ + P      
Sbjct: 384 AIEKFP--ENIGF-QTQKGNMLINLSR--------FDEAESVFQRLIEKFPHQPQGYDGY 432

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             +T                     ++  A+ R++  +  + +    +     ++   + 
Sbjct: 433 ARLT--------HSFA---------DWNLALKRWENAIEKFPENIGFQTQKGNML---IN 472

Query: 240 LALMDEAREVVSLIQERYP 258
           L+  DEA  V   + E++P
Sbjct: 473 LSRFDEAESVFQRLIEKFP 491



 Score = 35.9 bits (82), Expect = 6.3,   Method: Composition-based stats.
 Identities = 27/199 (13%), Positives = 64/199 (32%), Gaps = 38/199 (19%)

Query: 62   EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ--YSAGKYQQAASLGEE 119
            +K  + +    F +A   F +    FP      +      + +  Y    +  A    E 
Sbjct: 1009 QKGNILINLSRFDEAESVFQRLIEKFP-----HQPQGYDGYAKLTYRFADWNLALKRWEN 1063

Query: 120  YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
             I ++P  +N+ +     G     + R                 R++E++ + P      
Sbjct: 1064 AIEKFP--ENIGF-QTQKGNMLINLSR--------FDEAESVFQRLIEKFPHQPQGYDGY 1112

Query: 180  FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
              +T                     ++  A+ R++  +  + +    +     ++   + 
Sbjct: 1113 ARLT--------HSFA---------DWNLALKRWENAIEKFPENIGFQTQKGNML---IN 1152

Query: 240  LALMDEAREVVSLIQERYP 258
            L+  DEA  V   + E++P
Sbjct: 1153 LSRFDEAESVFQRLIEKFP 1171


>gi|254458973|ref|ZP_05072396.1| hypothetical protein CBGD1_1613 [Campylobacterales bacterium GD 1]
 gi|207084244|gb|EDZ61533.1| hypothetical protein CBGD1_1613 [Campylobacterales bacterium GD 1]
          Length = 306

 Score = 39.7 bits (92), Expect = 0.40,   Method: Composition-based stats.
 Identities = 19/144 (13%), Positives = 52/144 (36%), Gaps = 17/144 (11%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC-SRDF--PFAGVARKSLLMSAF 102
               S  D     EV + A     ++ ++++ EY+     +++    +            
Sbjct: 177 TPKKSKIDSMSNAEVAKLAQQSYDKKYYTESIEYYTHLIKKNYKPAGSHY------KLGE 230

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
           + Y    Y +A +  ++  + Y ++  +  +     +S  +   +        K    + 
Sbjct: 231 IYYYRKNYAEAIAYFKKSASLYSKASYMPTLMLHTAVSMEKTGDE--------KNAKSFY 282

Query: 163 SRIVERYTNSPYVKGARFYVTVGR 186
           + +V +Y NS   K A+  ++  +
Sbjct: 283 NGVVVKYPNSTEAKTAKSNLSKMK 306


>gi|153839872|ref|ZP_01992539.1| tetratricopeptide repeat family protein [Vibrio parahaemolyticus
           AQ3810]
 gi|149746605|gb|EDM57593.1| tetratricopeptide repeat family protein [Vibrio parahaemolyticus
           AQ3810]
          Length = 391

 Score = 39.7 bits (92), Expect = 0.40,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 58/186 (31%), Gaps = 34/186 (18%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A  ++      +A + F Q   +  +   A +  L++ +      ++++A     +    
Sbjct: 114 AKDYMVSGFLDRAEKIFEQLVEEPDYKEAALQ-QLVTIY--QQTREWEKAIHYANQLAKM 170

Query: 124 -YPESK---NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
               S+   N+ +        +   I  +      T   +Q+  + +             
Sbjct: 171 GNQRSRMRTNIAH--------FWCEIAMLDQADGNTNKAIQHFKKALSEDPKCVRAS--- 219

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                         + +GR YL+  +Y   I     VL    D +   + +  + E Y  
Sbjct: 220 --------------ISLGRIYLESEDYKQTIKYLTGVLE--QDKDFVSDVLPTIAECYHH 263

Query: 240 LALMDE 245
           L   DE
Sbjct: 264 LGQEDE 269


>gi|118575554|ref|YP_875297.1| TPR repeat protein [Cenarchaeum symbiosum A]
 gi|118194075|gb|ABK76993.1| TPR repeat protein [Cenarchaeum symbiosum A]
          Length = 369

 Score = 39.7 bits (92), Expect = 0.40,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 29/76 (38%), Gaps = 3/76 (3%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           +    D       +R++++K V  + ++    A E F Q  R   +      +L+   + 
Sbjct: 17  KKAGTDLTDSDYQRRKLHKKGVNLMADEKLDDAAEAFEQALR---YDPENVDTLIKLGYA 73

Query: 104 QYSAGKYQQAASLGEE 119
           ++    Y  A  + + 
Sbjct: 74  KFHLDDYTDALKVYDR 89


>gi|91201196|emb|CAJ74256.1| hypothetical protein kuste3493 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 234

 Score = 39.7 bits (92), Expect = 0.40,   Method: Composition-based stats.
 Identities = 11/92 (11%), Positives = 35/92 (38%), Gaps = 12/92 (13%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           +Y   +Y   + + ++  +++A + F    + +  F                  +     
Sbjct: 113 KYSEALYNLGIYYYEKTQYNEAIKAFKDAVKRNTRFDMGFY------NLGVAYAAIDATD 166

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
           ++ +  +  I   P+  +    YY +G++Y++
Sbjct: 167 ESIAAFKRVIELNPKYPD---AYYNLGVAYSK 195


>gi|328474640|gb|EGF45445.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus 10329]
          Length = 391

 Score = 39.7 bits (92), Expect = 0.40,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 57/186 (30%), Gaps = 34/186 (18%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A  ++      +A + F Q   +  +   A +  L++ +      +++ A     +    
Sbjct: 114 AKDYMVSGFLDRAEKIFEQLVEEPDYKEAALQ-QLVTIY--QQTREWENAIHYANQLAKM 170

Query: 124 -YPESK---NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
               S+   N+ +        +   I  +      T   +Q+  + +             
Sbjct: 171 GNQRSRMRTNIAH--------FWCEIAMLDQADGNTNKAIQHFKKALSEDPKCVRAS--- 219

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                         + +GR YL+  +Y   I     VL    D +   + +  + E Y  
Sbjct: 220 --------------ISLGRIYLESEDYKQTIKYLTGVLE--QDKDFVSDVLPTIAECYHH 263

Query: 240 LALMDE 245
           L   DE
Sbjct: 264 LGQEDE 269


>gi|313204167|ref|YP_004042824.1| tpr domaiN-containing protein [Paludibacter propionicigenes WB4]
 gi|312443483|gb|ADQ79839.1| TPR domain-containing protein [Paludibacter propionicigenes WB4]
          Length = 1157

 Score = 39.7 bits (92), Expect = 0.40,   Method: Composition-based stats.
 Identities = 21/172 (12%), Positives = 55/172 (31%), Gaps = 14/172 (8%)

Query: 105 YSA--GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
           Y         + +  EE+  ++   K V   Y+     Y   ++    DQ        Y 
Sbjct: 593 YKDKIEDVPMSIATFEEFCRRFGSDKRVADAYF---NIYQIQLKSGNQDQ-----ANVYR 644

Query: 163 SRIVERYTNSPYVKGARF--YVTVGRNQLAAKEVEIGRYY--LKRGEYVAAIPRFQLVLA 218
           ++++  + +S Y K      Y     N    ++      Y    + +Y     +      
Sbjct: 645 TKLITDFPDSKYQKILSQSDYAVRLENMYKEQDSIYSLTYKAFNQSDYKTVYKQVAYAKQ 704

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
           N+  +    + +     +       +  R  ++ + + YP+   +   + ++
Sbjct: 705 NFPLSTLMPKFLFLNALSIGKSDKEENFRTALNDLLKSYPESDVSAMAKDIL 756


>gi|296126686|ref|YP_003633938.1| Tetratricopeptide TPR_2 repeat protein [Brachyspira murdochii DSM
           12563]
 gi|296018502|gb|ADG71739.1| Tetratricopeptide TPR_2 repeat protein [Brachyspira murdochii DSM
           12563]
          Length = 758

 Score = 39.7 bits (92), Expect = 0.40,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 32/79 (40%), Gaps = 12/79 (15%)

Query: 69  KEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
             + + KA EYFN+    +  +       K+    A   Y+   Y++A     + I  Y 
Sbjct: 324 SNEEYDKAIEYFNKSIEINDRY------YKAYNNLALAYYNLKNYEKAIENFNKSIDIYS 377

Query: 126 ESKNVDYVYYLVGMSYAQM 144
            + +    Y  +G+SY  +
Sbjct: 378 NNAD---AYNCIGLSYYHL 393



 Score = 38.9 bits (90), Expect = 0.79,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 67/205 (32%), Gaps = 57/205 (27%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM----- 99
           DV L  V        +Y K  + ++ + +  A  YF +          ARK  +      
Sbjct: 30  DVILKKVPKNYRAN-LY-KGQVCVEMKEYEDAIRYFEE----------ARKVDIKTFKSY 77

Query: 100 --SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
                  ++  +Y +A     E +   P S      Y L+G+SY                
Sbjct: 78  NLLGISYHAIKQYDKAIECFNETLKITPNSYK---AYNLLGISYFAK--------EDYTK 126

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
            ++Y ++ +E                   N LA        +Y K  +Y  AI  F+   
Sbjct: 127 AIEYFNKSIEINP----------KYDKAYNNLA-------LFYYKNKKYNEAIEFFEH-- 167

Query: 218 ANYSDAEHAEEAMARLVEAYVALAL 242
                ++  +E   R+ +AY  L +
Sbjct: 168 -----SKSLDE---RVFKAYDMLGM 184



 Score = 35.9 bits (82), Expect = 6.7,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 42/105 (40%), Gaps = 14/105 (13%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
            + +  +++++KA EYFN+     P      K+    A   Y   KY +A    E   + 
Sbjct: 115 GISYFAKEDYTKAIEYFNKSIEINP--KY-DKAYNNLALFYYKNKKYNEAIEFFEHSKSL 171

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
               + V   Y ++GMSY ++         + +  ++   R  + 
Sbjct: 172 ---DERVFKAYDMLGMSYYKI--------GSYEKAIECFKRFFQY 205


>gi|225619724|ref|YP_002720981.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
 gi|225214543|gb|ACN83277.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
          Length = 424

 Score = 39.7 bits (92), Expect = 0.40,   Method: Composition-based stats.
 Identities = 18/121 (14%), Positives = 44/121 (36%), Gaps = 14/121 (11%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGV 92
           +G    +  D  +    + +Y    Y +AV        ++A + ++   +   +      
Sbjct: 286 LGLYEDAIEDFNIAINIEPKYIDAYYNRAVAKNNMGLHNEAIKDYDIVIELDSNH----- 340

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV----DYVYYLVGMSYAQMIRDV 148
              +    A   Y+   Y++A    ++ I   P+S        +  Y +G+ Y + ++D 
Sbjct: 341 -INAYYNRALSYYNLSDYEEAIKNYDKVIELNPKSAEAYNNRGFAKYSIGL-YEEALKDY 398

Query: 149 P 149
            
Sbjct: 399 D 399



 Score = 35.5 bits (81), Expect = 8.6,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 36/84 (42%), Gaps = 3/84 (3%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
           +G   ++ +D  +    D  +    Y +A+ +    ++ +A + +++     P +  A  
Sbjct: 320 MGLHNEAIKDYDIVIELDSNHINAYYNRALSYYNLSDYEEAIKNYDKVIELNPKSAEAYN 379

Query: 96  SLLMSAFVQYSAGKYQQAASLGEE 119
                 F +YS G Y++A    ++
Sbjct: 380 ---NRGFAKYSIGLYEEALKDYDK 400


>gi|108760794|ref|YP_632793.1| TPR domain-containing protein [Myxococcus xanthus DK 1622]
 gi|108464674|gb|ABF89859.1| TPR domain protein [Myxococcus xanthus DK 1622]
          Length = 498

 Score = 39.7 bits (92), Expect = 0.40,   Method: Composition-based stats.
 Identities = 20/157 (12%), Positives = 45/157 (28%), Gaps = 24/157 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
               ++     S  D  + +++  +    L      +A  +  +  +  P      K+  
Sbjct: 1   MTTRAKGRGETSPADDEFLQQL-SRGGELLAAGRVHEAQPFLERAHQLHP---RMEKAQN 56

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV---GMSYAQMIRDVPYDQRAT 155
           +     +  G Y +AA L E  +   P          L    G+ Y +          A 
Sbjct: 57  LLGLCYFKLGLYDRAAELYEMLVRDNPVDPT------LRVNLGLVYLKT--------SAL 102

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
           +   +      +          A+ Y+ +   Q+   
Sbjct: 103 QRAAREFETATDLAPEHQ---KAQNYLGLTLAQMGEY 136


>gi|87311607|ref|ZP_01093725.1| serine/threonine protein kinase related protein-putative
           PQQ-dependent oxidoreductase-like protein
           [Blastopirellula marina DSM 3645]
 gi|87285729|gb|EAQ77645.1| serine/threonine protein kinase related protein-putative
           PQQ-dependent oxidoreductase-like protein
           [Blastopirellula marina DSM 3645]
          Length = 1113

 Score = 39.7 bits (92), Expect = 0.40,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 19/45 (42%)

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
            A   Y   KY QA S  +++++ +P            G++  ++
Sbjct: 190 LAETDYEGRKYAQAVSKYDKFLSSFPTHSQAPTARVRRGLANLRL 234


>gi|296127341|ref|YP_003634593.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
 gi|296019157|gb|ADG72394.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
          Length = 750

 Score = 39.7 bits (92), Expect = 0.41,   Method: Composition-based stats.
 Identities = 47/270 (17%), Positives = 90/270 (33%), Gaps = 61/270 (22%)

Query: 14  AWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-YEKAVLFLKEQN 72
             A   YK AL I  + ++ +      + S + Y  ++ D  +  E+ Y +A ++     
Sbjct: 433 QEAINYYKRALEINPNYSLSYYNIALAEMSLEDYDKALEDFNHALELGYNEADIYTNIGL 492

Query: 73  -------FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
                  + KA EY+N+     P       +    AF   +  KY++A  + ++ I  YP
Sbjct: 493 IYSREAIYDKAIEYYNKVLEINPN---KVNAYYNIAFCLSNMDKYKEALEIYDKVIRMYP 549

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            + +   VYY  G +  ++ +         +  ++    I+    NS +           
Sbjct: 550 GNFD---VYYERGYTKYRVSK--------YEEAIRDFDIIINV--NSKHYNA-------- 588

Query: 186 RNQLAAKEVEIGRYYLK------RGEYVAAIPRFQLVLANYSDAE--HAEEAMARLVEAY 237
                        YY +         Y  AI  F   +    +    ++E+A       Y
Sbjct: 589 -------------YYYRGCSKKYLKNYDEAIKDFDKAIEYNPNNPDYYSEKA-----SCY 630

Query: 238 VALALMDEA-REVVSLIQERYPQGYWARYV 266
             L    E+       I+       W  Y+
Sbjct: 631 DYLNKYRESIENYDKAIELN--DNDWFLYI 658


>gi|198452029|ref|XP_002137412.1| GA26563 [Drosophila pseudoobscura pseudoobscura]
 gi|198131756|gb|EDY67970.1| GA26563 [Drosophila pseudoobscura pseudoobscura]
          Length = 522

 Score = 39.7 bits (92), Expect = 0.41,   Method: Composition-based stats.
 Identities = 20/151 (13%), Positives = 40/151 (26%), Gaps = 35/151 (23%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSA 101
            +    +  D     +   +    LK + F+KA + + +    +P +    A +SL    
Sbjct: 38  EEGGPKNDQDFAAAEQYKNQGNDLLKTKEFTKAIDMYTKAIDLYPNSAVYYANRSL---- 93

Query: 102 FVQ-------YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
                     Y+      A      Y+            YY    ++  +          
Sbjct: 94  -AHLRQESFGYALQDGVSAVKADPGYLK----------GYYRRAAAHMSL--------GK 134

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            K  L     + +   N      A+   T  
Sbjct: 135 FKQALCDFEFVAKCRPNDK---DAKLKFTEC 162


>gi|194859312|ref|XP_001969353.1| GG10059 [Drosophila erecta]
 gi|190661220|gb|EDV58412.1| GG10059 [Drosophila erecta]
          Length = 439

 Score = 39.7 bits (92), Expect = 0.41,   Method: Composition-based stats.
 Identities = 22/164 (13%), Positives = 52/164 (31%), Gaps = 25/164 (15%)

Query: 35  LVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFP----F 89
           LV   +        D   +   + +VY EK   + K++N++ A + + +C    P     
Sbjct: 231 LVDCGKGLEEWKLSDE--ERLAEAKVYKEKGTNYFKKENWALAIKMYTKCKNLLPSTADT 288

Query: 90  AGVARKSLL----MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
               +K  +      A     +  + +A       +      +N     Y  G     + 
Sbjct: 289 NEEVKKVKVATHSNIALCHQKSNDHFEAKQECNAVLAL---DENNVKALYRRGQCNLTI- 344

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
                     +  L+   ++++    +     A   V + + +L
Sbjct: 345 -------NELEDALEDFQKVIQLEPGNK---AAANQVIICKQKL 378


>gi|94971634|ref|YP_593682.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94553684|gb|ABF43608.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
           Ellin345]
          Length = 1404

 Score = 39.7 bits (92), Expect = 0.41,   Method: Composition-based stats.
 Identities = 19/121 (15%), Positives = 38/121 (31%), Gaps = 22/121 (18%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAY----EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                + EK         + +A         +  +D       R + +  A+  Y+ G+Y
Sbjct: 589 DEPHVLVEKERYLFHSGKYQEAAVAGQRALEKLPKD-------RNASVYLAYTYYNLGRY 641

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
               +L ++Y    P+  N              +   V    + T   +Q  +R +ER  
Sbjct: 642 DDVLALSDKYDNIIPKEPNFP-----------LLEGHVHRQSQLTDEAVQDYTRALERDP 690

Query: 171 N 171
            
Sbjct: 691 K 691



 Score = 35.5 bits (81), Expect = 9.3,   Method: Composition-based stats.
 Identities = 17/122 (13%), Positives = 41/122 (33%), Gaps = 21/122 (17%)

Query: 156 KLMLQYMSRIVERYTNSPYVKG--ARFYV-----TVGRNQLAA---------KEVEIG-R 198
           +  +   +  ++    S   K   A+ Y+        +  LA           ++ +   
Sbjct: 120 QESINAYNHAIQTDPKSLDAKSGLAQTYMKMGRTDEAKRLLAQVLAAGSTRQNDLLVAGE 179

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
            YL+  +Y   I   Q       +A     A   +   Y+ +    +A++++ + + R P
Sbjct: 180 LYLRTKDYQQGINYLQRADNLKPNA----HAELLMAMGYMKMKQPQKAKQLLDMAKRRAP 235

Query: 259 QG 260
             
Sbjct: 236 NN 237


>gi|15594660|ref|NP_212449.1| hypothetical protein BB0315 [Borrelia burgdorferi B31]
 gi|195941331|ref|ZP_03086713.1| hypothetical protein Bbur8_00415 [Borrelia burgdorferi 80a]
 gi|218249786|ref|YP_002374837.1| hypothetical protein BbuZS7_0320 [Borrelia burgdorferi ZS7]
 gi|221217696|ref|ZP_03589164.1| conserved hypothetical protein [Borrelia burgdorferi 72a]
 gi|224533207|ref|ZP_03673807.1| conserved hypothetical protein [Borrelia burgdorferi WI91-23]
 gi|224533773|ref|ZP_03674361.1| conserved hypothetical protein [Borrelia burgdorferi CA-11.2a]
 gi|225550163|ref|ZP_03771123.1| conserved hypothetical protein [Borrelia burgdorferi 118a]
 gi|226320616|ref|ZP_03796176.1| conserved hypothetical protein [Borrelia burgdorferi 29805]
 gi|226321632|ref|ZP_03797158.1| conserved hypothetical protein [Borrelia burgdorferi Bol26]
 gi|2688223|gb|AAC66704.1| predicted coding region BB0315 [Borrelia burgdorferi B31]
 gi|218164974|gb|ACK75035.1| conserved hypothetical protein [Borrelia burgdorferi ZS7]
 gi|221192373|gb|EEE18592.1| conserved hypothetical protein [Borrelia burgdorferi 72a]
 gi|224511934|gb|EEF82335.1| conserved hypothetical protein [Borrelia burgdorferi WI91-23]
 gi|224513066|gb|EEF83429.1| conserved hypothetical protein [Borrelia burgdorferi CA-11.2a]
 gi|225369275|gb|EEG98728.1| conserved hypothetical protein [Borrelia burgdorferi 118a]
 gi|226232821|gb|EEH31574.1| conserved hypothetical protein [Borrelia burgdorferi Bol26]
 gi|226234035|gb|EEH32756.1| conserved hypothetical protein [Borrelia burgdorferi 29805]
 gi|312148142|gb|ADQ30801.1| conserved hypothetical protein [Borrelia burgdorferi JD1]
 gi|312149570|gb|ADQ29641.1| conserved hypothetical protein [Borrelia burgdorferi N40]
          Length = 228

 Score = 39.7 bits (92), Expect = 0.41,   Method: Composition-based stats.
 Identities = 19/180 (10%), Positives = 57/180 (31%), Gaps = 44/180 (24%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           +TI        +      ++  + L+   +     ++Y+K++L    + ++KA E   + 
Sbjct: 4   ITIMILFYGLIINVCPTTTTSILKLNKKANKHTIEKLYQKSMLLKDSKKYNKAIESLTKI 63

Query: 84  SRDFPFAGVARKSLLMSAFVQ-------YSAGKYQQAASLGEEYIT----------QYPE 126
                            A          Y    +++A    ++Y+               
Sbjct: 64  INM----------DQNQADAHLLLSELEYLNKNWKKAIIKSQDYLKIIDFKDKKNFL--- 110

Query: 127 SKNVDYVYYLVG---------MSYAQMIRDVPYDQRATKLMLQY-MSRIVERYTNSPYVK 176
             ++ + Y+L+G         + + Q  +++        + +     + +  +TN+    
Sbjct: 111 --DISWAYFLIGEVKNSMDYIIKFFQSGKELFR--ENIFIAIDALFKKSIYHFTNNENAA 166


>gi|253681865|ref|ZP_04862662.1| TPR domain protein [Clostridium botulinum D str. 1873]
 gi|253561577|gb|EES91029.1| TPR domain protein [Clostridium botulinum D str. 1873]
          Length = 461

 Score = 39.7 bits (92), Expect = 0.41,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 7/77 (9%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           +K    L ++ + +A  Y+ +     P    A+   L  AF  +   +Y++A     E I
Sbjct: 76  KKGNNALDKKQYRRAILYYKKILLIEPKLTFAKN-KLGLAFFYHK--QYEEAVIQFRELI 132

Query: 122 TQYPESK----NVDYVY 134
              P +     N+ YVY
Sbjct: 133 QLNPHNSIFYNNLAYVY 149


>gi|225012030|ref|ZP_03702467.1| Tetratricopeptide TPR_2 repeat protein [Flavobacteria bacterium
           MS024-2A]
 gi|225003585|gb|EEG41558.1| Tetratricopeptide TPR_2 repeat protein [Flavobacteria bacterium
           MS024-2A]
          Length = 265

 Score = 39.7 bits (92), Expect = 0.41,   Method: Composition-based stats.
 Identities = 9/76 (11%), Positives = 24/76 (31%), Gaps = 5/76 (6%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
              E++E+      + +F+KA   +             +           Y      ++ 
Sbjct: 34  SSEELFEQGNAAYNDGDFTKAISLYVQTLD----MGSHSAALYFNMGNAYYRLNNVAESI 89

Query: 115 SLGEEYITQYPESKNV 130
              E+     P++K++
Sbjct: 90  YYFEKAKQLDPDNKDI 105


>gi|218441625|ref|YP_002379954.1| serine/threonine protein kinase with TPR repeats [Cyanothece sp.
           PCC 7424]
 gi|218174353|gb|ACK73086.1| serine/threonine protein kinase with TPR repeats [Cyanothece sp.
           PCC 7424]
          Length = 730

 Score = 39.7 bits (92), Expect = 0.41,   Method: Composition-based stats.
 Identities = 17/113 (15%), Positives = 41/113 (36%), Gaps = 16/113 (14%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y+K       +N+ +A + + +  +  P F+    ++         +  KY QA     +
Sbjct: 501 YQKGFALQNLKNYEEAIKSYEKAVKINPSFS----QAWYQKGNSYMNLEKYSQAGESYRQ 556

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
            +   P   ++   +Y  G++  ++ R         +  L+      +   NS
Sbjct: 557 AVQFQP---DLYQAWYSQGIALNRLNR--------YREALKAFEEGTQIQPNS 598



 Score = 35.9 bits (82), Expect = 5.6,   Method: Composition-based stats.
 Identities = 27/210 (12%), Positives = 60/210 (28%), Gaps = 36/210 (17%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           E+A +  K    S+A   + +     P      ++      +Q     Y  A     + +
Sbjct: 434 ERAEVLEKLGKNSEAIYSYEKVIDFTP-NEW--QAWQNLGEIQVKLQDYATALVSLNKSL 490

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              P+ +   + +Y  G +   +        +  +  ++   + V+   +          
Sbjct: 491 QINPDDE---WSWYQKGFALQNL--------KNYEEAIKSYEKAVKINPSFSQAW----- 534

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
                        + G  Y+   +Y  A   ++  +    D     +A      A   L 
Sbjct: 535 ------------YQKGNSYMNLEKYSQAGESYRQAVQFQPD---LYQAWYSQGIALNRLN 579

Query: 242 LMDEAREVVSLIQERYPQG--YWARYVETL 269
              EA +      +  P     W +   TL
Sbjct: 580 RYREALKAFEEGTQIQPNSFEAWYQKAWTL 609


>gi|160889567|ref|ZP_02070570.1| hypothetical protein BACUNI_01991 [Bacteroides uniformis ATCC 8492]
 gi|270296691|ref|ZP_06202890.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|317480059|ref|ZP_07939171.1| tetratricopeptide [Bacteroides sp. 4_1_36]
 gi|156861084|gb|EDO54515.1| hypothetical protein BACUNI_01991 [Bacteroides uniformis ATCC 8492]
 gi|270272678|gb|EFA18541.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|316903801|gb|EFV25643.1| tetratricopeptide [Bacteroides sp. 4_1_36]
          Length = 281

 Score = 39.7 bits (92), Expect = 0.41,   Method: Composition-based stats.
 Identities = 14/123 (11%), Positives = 36/123 (29%), Gaps = 12/123 (9%)

Query: 16  AYQLYKFALTIFFSIAV----CFLVGWERQSSRDVYLDSVTDVRYQREVYE----KAVLF 67
             ++  F L++  +I         V   + +S    + S  +    R+       +    
Sbjct: 3   MNKILFFTLSLVMAITAYGQNSASVDTLQTASDSTSVGSHAEFSAARQESNVTKAEGDSA 62

Query: 68  LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
               +++ A + +    +       A           Y A    +A    E  +   P +
Sbjct: 63  YIRNDYASAIQIYENLLKK---GEAAE-VYYNLGNSYYKADDIARAILNYERALLLEPGN 118

Query: 128 KNV 130
            ++
Sbjct: 119 ADI 121


>gi|154250089|ref|YP_001410914.1| TPR repeat-containing protein [Fervidobacterium nodosum Rt17-B1]
 gi|154154025|gb|ABS61257.1| TPR repeat-containing protein [Fervidobacterium nodosum Rt17-B1]
          Length = 533

 Score = 39.7 bits (92), Expect = 0.41,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 75/226 (33%), Gaps = 57/226 (25%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRD---FPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
            YEK  + L E+N+++A E   +       + +      +LL +       G Y+ A   
Sbjct: 70  YYEKFKVLLNEKNYAEAEEILKKVKELHYDYRYHFY--NALLQA-----KMGNYEFAEIE 122

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            ++ +T  P   +    YY +G                     +     +E Y    Y K
Sbjct: 123 FKQALTLNP---DFALAYYELGNVLF---------------AEKDYEDAIEAYRK-AYEK 163

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGE-------YVAAIPRFQLVLANYSDAEHAEEA 229
              F + + +         IG  Y++ G+       Y + I R +  L  Y      +E 
Sbjct: 164 DPNFLLPLLK---------IGDTYMELGQLDDAEMFYKSIIARDK--LHQY----ATKEG 208

Query: 230 MAR--LVEAYVALA----LMDEAREVVSLIQERYPQGYWARYVETL 269
           +    + EAY+ L     L  +  +   + +     G  A     L
Sbjct: 209 LEIEPMPEAYLRLGVLYNLRQQYEKAEEIFKLGLSTGKKAEITYNL 254


>gi|78223239|ref|YP_384986.1| TPR repeat-containing protein [Geobacter metallireducens GS-15]
 gi|78194494|gb|ABB32261.1| TPR repeat protein [Geobacter metallireducens GS-15]
          Length = 883

 Score = 39.7 bits (92), Expect = 0.41,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 37/112 (33%), Gaps = 22/112 (19%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
            + AL       +    G                 + + E+Y +AV  L + N + A   
Sbjct: 4   RRIALICLIVATLSACGG-----------------KTKEELYAEAVKELDKGNANGAIVL 46

Query: 80  FN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
                 +D  +      +    A    + GK++QA    ++ + Q P +  +
Sbjct: 47  LKNAVEKDQNYFD----ARYKLAKAYMTVGKFEQAEKEFQKALRQNPSNPEI 94



 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 10/67 (14%), Positives = 20/67 (29%), Gaps = 8/67 (11%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDF--PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           K +     +N+ +A        +++  P A              Y     + A S   + 
Sbjct: 268 KGIALYTRKNYDQAITELQGVVKNYQNPGAYY------YLGLSYYQRNDLESALSQFRKV 321

Query: 121 ITQYPES 127
           I   P+ 
Sbjct: 322 IDLNPKH 328


>gi|119384212|ref|YP_915268.1| methyltransferase type 12 [Paracoccus denitrificans PD1222]
 gi|119373979|gb|ABL69572.1| Methyltransferase type 12 [Paracoccus denitrificans PD1222]
          Length = 417

 Score = 39.7 bits (92), Expect = 0.41,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 26/78 (33%), Gaps = 3/78 (3%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           T   Y   +Y  AV  +   +FS A +   + +     +    ++    A    +     
Sbjct: 103 TRPGYAEAMYNLAVTSMDLADFSTAADLLAEVTAV---SPADARAHFSLADALIALNDLD 159

Query: 112 QAASLGEEYITQYPESKN 129
            AA     Y+   P  ++
Sbjct: 160 AAALSLHRYLRLAPGDEH 177


>gi|332884789|gb|EGK05045.1| hypothetical protein HMPREF9456_03198 [Dysgonomonas mossii DSM
           22836]
          Length = 354

 Score = 39.7 bits (92), Expect = 0.41,   Method: Composition-based stats.
 Identities = 18/156 (11%), Positives = 54/156 (34%), Gaps = 39/156 (25%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRD------FPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           +AV  +      ++     +          +P+           A+       Y++A S+
Sbjct: 32  EAVKLMDCGKVEESITLLKEAQELDPANIVYPY---------EIAYAHCLEENYEEAISI 82

Query: 117 GEEYITQYP--ESKNVDYVYY-LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
            +      P  ++++    ++ ++G+ Y  +           +  ++   + ++++ +S 
Sbjct: 83  LK------PIQDNEDASDTFFQMLGICYNSI--------GNNEGAIKTFEKGIKKFPDS- 127

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
                  Y  +    +A  E      Y ++G  +AA
Sbjct: 128 ----GALYFELANAYMAQDEKYTALSYFEKG--IAA 157


>gi|302912770|ref|XP_003050773.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256731711|gb|EEU45060.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 613

 Score = 39.7 bits (92), Expect = 0.41,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 46/141 (32%), Gaps = 20/141 (14%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDF 87
           ++   +G   ++  +       D       Y +A     + + + A + + +     +DF
Sbjct: 368 SISLELGEPDKAEAEFAKALEQDNNDPDVYYHRAQAHFIKGDLADAQKDYQKSIDLDKDF 427

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
            F+       +     QY  G    + +     I  +P+  +V Y YY           +
Sbjct: 428 IFSH------IQLGVTQYKMGSIASSMATFRRCIKNFPKVPDV-YNYY----------GE 470

Query: 148 VPYDQRATKLMLQYMSRIVER 168
           +  DQ      ++     +E 
Sbjct: 471 LLLDQGNFSEAVEKFDTAMEM 491


>gi|225552004|ref|ZP_03772944.1| conserved hypothetical protein [Borrelia sp. SV1]
 gi|225371002|gb|EEH00432.1| conserved hypothetical protein [Borrelia sp. SV1]
          Length = 227

 Score = 39.7 bits (92), Expect = 0.41,   Method: Composition-based stats.
 Identities = 17/132 (12%), Positives = 47/132 (35%), Gaps = 25/132 (18%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K  + +F+ +    +      ++  + LD   +     ++Y+K++L    + ++KA E
Sbjct: 1   MKKIIIILFYGL---IINICPTTTTSILKLDEKANKYTIEKLYQKSMLLKDSKKYNKAIE 57

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQ-------YSAGKYQQAASLGEEYITQ-----YPE 126
              +                  A          Y    +++A    ++Y+          
Sbjct: 58  SLTKIINM----------DKNQADAHLLLSELEYLNKNWKKAIIKSQDYLKIIDFKDKKN 107

Query: 127 SKNVDYVYYLVG 138
             ++ + Y+L+G
Sbjct: 108 FLDISWAYFLIG 119


>gi|195145512|ref|XP_002013736.1| GL24300 [Drosophila persimilis]
 gi|194102679|gb|EDW24722.1| GL24300 [Drosophila persimilis]
          Length = 522

 Score = 39.7 bits (92), Expect = 0.41,   Method: Composition-based stats.
 Identities = 20/151 (13%), Positives = 40/151 (26%), Gaps = 35/151 (23%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSA 101
            +    +  D     +   +    LK + F+KA + + +    +P +    A +SL    
Sbjct: 38  EEGGPKNDQDFAAAEQYKNQGNDLLKTKEFTKAIDMYTKAIDLYPNSAVYYANRSL---- 93

Query: 102 FVQ-------YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
                     Y+      A      Y+            YY    ++  +          
Sbjct: 94  -AHLRQESFGYALQDGVSAVKADPGYLK----------GYYRRAAAHMSL--------GK 134

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            K  L     + +   N      A+   T  
Sbjct: 135 FKQALCDFEFVAKCRPNDK---DAKLKFTEC 162


>gi|186510403|ref|NP_001118695.1| ROF1 (ROTAMASE FKBP 1); FK506 binding / calmodulin binding /
           peptidyl-prolyl cis-trans isomerase [Arabidopsis
           thaliana]
 gi|332643476|gb|AEE76997.1| rotamase FKBP 1 [Arabidopsis thaliana]
          Length = 562

 Score = 39.7 bits (92), Expect = 0.41,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 52/151 (34%), Gaps = 26/151 (17%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQ----CSRDFPFA-GVARKSL-------LMSAFVQYSAGK 109
           E+     K   +S A + + +       D  F+    +++        L  A  +     
Sbjct: 405 EEGNSKFKGGKYSLASKRYEKAVKFIEYDTSFSEEEKKQAKALKVACNLNDAACKLKLKD 464

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y+QA  L  + +    ES NV    Y    +Y ++  D+   +   K  L       E  
Sbjct: 465 YKQAEKLCTKVLEL--ESTNVK-ALYRRAQAYMELS-DLDLAEFDVKKAL-------EID 513

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
            N+  VK  +  +     +   KE    ++Y
Sbjct: 514 PNNREVKLEQKRLKEKMKEFNKKE---AKFY 541


>gi|305665470|ref|YP_003861757.1| tetratricopeptide repeat domain-containing protein [Maribacter sp.
           HTCC2170]
 gi|88710226|gb|EAR02458.1| tetratricopeptide repeat domain protein [Maribacter sp. HTCC2170]
          Length = 592

 Score = 39.7 bits (92), Expect = 0.41,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 46/126 (36%), Gaps = 7/126 (5%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +A L   +    +A    +   ++     +  ++LL    +  S   Y  A    ++ 
Sbjct: 469 YARADLLAYQNKTKEAITALDDILQNHKGEKIEDEALLKQGELLVSIKDYDAAKFNYQKI 528

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           I  Y      D  Y+ +G  Y  ++ +        +   ++  +I+  Y +S Y   AR 
Sbjct: 529 IEFYTSDILADDAYFALGELYRNVLNEP-------EKAKEHYEKIIYNYQDSYYFPQARK 581

Query: 181 YVTVGR 186
              + R
Sbjct: 582 NFRLLR 587


>gi|240949273|ref|ZP_04753617.1| hypothetical protein AM305_10026 [Actinobacillus minor NM305]
 gi|240296389|gb|EER47033.1| hypothetical protein AM305_10026 [Actinobacillus minor NM305]
          Length = 397

 Score = 39.7 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 74/197 (37%), Gaps = 32/197 (16%)

Query: 48  LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           LD   D   ++++  K   A  F+    + +A  Y+     +  FA  +  S LMS +  
Sbjct: 103 LDLSPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYILLLDEPEFAVNS-LSQLMSIY-- 159

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
               ++++A ++ E+ +   PE+  +   +Y               DQ A    L  + +
Sbjct: 160 QKTKEWKKAINVSEKLLKIAPETDRIPLAHYY---CEYAQAVKNE-DQNAF---LSLLEK 212

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
            +E +                    A   + +G Y+L+      A   ++ VL    D++
Sbjct: 213 ALEHFPQC-----------------ARASMMLGDYHLENQRVRTAADYYEKVL--MQDSD 253

Query: 225 HAEEAMARLVEAYVALA 241
           +  E + ++   Y+ L 
Sbjct: 254 YIGEVLDKIRTCYLTLK 270


>gi|153007329|ref|YP_001381654.1| hypothetical protein Anae109_4492 [Anaeromyxobacter sp. Fw109-5]
 gi|152030902|gb|ABS28670.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp.
           Fw109-5]
          Length = 279

 Score = 39.7 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 20/150 (13%), Positives = 41/150 (27%), Gaps = 44/150 (29%)

Query: 67  FLKEQNFSKAYEYFNQCSRDFPFAGVARKS------------------------------ 96
           +L+  +++ A  Y+ +    +P    AR++                              
Sbjct: 78  YLELGDYTGAISYYRRIVALYPGGKEAREARVQIGDIYRERFRDPLAAIAQYADVAASDA 137

Query: 97  ------LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
                  L  A      G + QA +       ++P+    D    L   +++   RD   
Sbjct: 138 PEAPRYQLEVARAYLELGNWSQARTEARILREKWPDHALADEAQLLAAQAWSLEKRDDS- 196

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARF 180
                   L     +++R      V  A  
Sbjct: 197 -------ALSAFQALIDRRPRPELVARALE 219



 Score = 39.3 bits (91), Expect = 0.63,   Method: Composition-based stats.
 Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 17/103 (16%)

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR-GEYVAAIPRFQLV 216
            + Y  RIV  Y      + AR              V+IG  Y +R  + +AAI ++  V
Sbjct: 87  AISYYRRIVALYPGGKEAREAR--------------VQIGDIYRERFRDPLAAIAQYADV 132

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            A  SDA  A      +  AY+ L    +AR    +++E++P 
Sbjct: 133 AA--SDAPEAPRYQLEVARAYLELGNWSQARTEARILREKWPD 173



 Score = 38.9 bits (90), Expect = 0.74,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 47/156 (30%), Gaps = 23/156 (14%)

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
                G Y  A S     +  YP  K        +G  Y    R+   D  A       +
Sbjct: 77  SYLELGDYTGAISYYRRIVALYPGGKEAREARVQIGDIY----RERFRDPLAAIAQYADV 132

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
           +              A              ++E+ R YL+ G +  A    +++   + D
Sbjct: 133 AA--------SDAPEAP-----------RYQLEVARAYLELGNWSQARTEARILREKWPD 173

Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
              A+EA     +A+      D A      + +R P
Sbjct: 174 HALADEAQLLAAQAWSLEKRDDSALSAFQALIDRRP 209


>gi|159896623|ref|YP_001542870.1| TPR repeat-containing protein [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159889662|gb|ABX02742.1| Tetratricopeptide TPR_2 repeat protein [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 1090

 Score = 39.7 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 17/116 (14%), Positives = 45/116 (38%), Gaps = 18/116 (15%)

Query: 57  QREVYEKAVLFLK----EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
            + ++++A+   +      +++KA     +   +FP      ++ +  A   +   K  Q
Sbjct: 4   NQAIFDRALEQYQLASRAGDWNKALTEAARAMTEFPTH---EQARIAVATALFHTNKLPQ 60

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           A  L +E + + P++             + + I  +   Q  T   ++   ++ ER
Sbjct: 61  ALQLWQELLKRNPDNP-----------IFTEYIAKIYRAQGDTDQAIELFMQLAER 105



 Score = 35.1 bits (80), Expect = 9.7,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 23/56 (41%), Gaps = 3/56 (5%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           A  +   +NF  A +   +  +  P     R++    A + +  G+  +A +  +E
Sbjct: 826 AEAYAANENFEGAIQALQRVKQLLP---YDRQAYTKLADIYFRQGRLNEALTQLDE 878


>gi|149058910|gb|EDM09917.1| similar to KIAA0372 gene product (predicted), isoform CRA_a [Rattus
           norvegicus]
 gi|149058913|gb|EDM09920.1| similar to KIAA0372 gene product (predicted), isoform CRA_a [Rattus
           norvegicus]
 gi|149058914|gb|EDM09921.1| similar to KIAA0372 gene product (predicted), isoform CRA_a [Rattus
           norvegicus]
          Length = 809

 Score = 39.7 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 46/133 (34%), Gaps = 10/133 (7%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVR-YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
           A+  L            LD ++D       +  + +  L      KA +        +P 
Sbjct: 93  ALLKLSDCASLEEAVHILDQLSDTDNTPGLLVLQGLACLNTGAIDKATKIMEDLVASYP- 151

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
             ++    L  A+V ++   Y QA +  +  +    +   V   +Y +G++Y  M  +  
Sbjct: 152 -DLSEAHALE-AYVHFTKKDYVQAETSFQRALE---KDAEVAEYHYQLGLTYWLMGEETR 206

Query: 150 YDQRATKLMLQYM 162
            D+      L + 
Sbjct: 207 KDRT---KALNHF 216


>gi|108758818|ref|YP_635275.1| serine/threonine kinase family protein [Myxococcus xanthus DK 1622]
 gi|108462698|gb|ABF87883.1| serine/threonine kinase family protein [Myxococcus xanthus DK 1622]
          Length = 992

 Score = 39.7 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 23/82 (28%), Gaps = 10/82 (12%)

Query: 62  EKAVLFLKEQNFSKAYEYFN-QCSRD----FPFAGVARKSLLMSAFVQYSAGKYQQ---- 112
           E     + +    +A   F    S       P      ++ L  A+  +     +Q    
Sbjct: 682 ELGATRMAQLRADEAMRLFEQALSTRRAALGPSHPDVARAQLELAYAHWRRSDVEQVEAL 741

Query: 113 AASLGEEYIT-QYPESKNVDYV 133
           A    E +     PE  +V   
Sbjct: 742 ARGALEVFERALGPEHPDVASA 763


>gi|147676483|ref|YP_001210698.1| hypothetical protein PTH_0148 [Pelotomaculum thermopropionicum SI]
 gi|146272580|dbj|BAF58329.1| hypothetical protein [Pelotomaculum thermopropionicum SI]
          Length = 500

 Score = 39.7 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 32/84 (38%), Gaps = 10/84 (11%)

Query: 49  DSVTDVRYQREVYEKAVLF--LKEQNF---SKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           +   D +  RE+YEK V    L   +      A +++       P+     ++L   A  
Sbjct: 300 EESRDPQEVRELYEKGVQAGRLSLGDLFFKKNAGKFWLILETR-PY----MRALAGLADS 354

Query: 104 QYSAGKYQQAASLGEEYITQYPES 127
            +  G+ QQA    +E +   P  
Sbjct: 355 LWKTGQRQQAIGHYKEMLRLNPND 378


>gi|116749723|ref|YP_846410.1| hypothetical protein Sfum_2293 [Syntrophobacter fumaroxidans MPOB]
 gi|116698787|gb|ABK17975.1| hypothetical protein Sfum_2293 [Syntrophobacter fumaroxidans MPOB]
          Length = 212

 Score = 39.7 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 20/34 (58%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
             L+Y   ++ RY +SP+   A+F+V + R  +A
Sbjct: 98  EALKYFRELIARYPDSPWASQAKFWVELLRKTVA 131


>gi|330965913|gb|EGH66173.1| type IV pilus biogenesis/stability protein PilW [Pseudomonas
           syringae pv. actinidiae str. M302091]
          Length = 252

 Score = 39.7 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 23/63 (36%), Gaps = 9/63 (14%)

Query: 64  AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
            +  LK  N  +A E F +     R  P      +SLL  A + Y   +Y  A    + +
Sbjct: 148 GMTSLKLGNREQAREQFTKALRLDRQQP------RSLLEMAQLYYEDRQYVPARDYYDRF 201

Query: 121 ITQ 123
              
Sbjct: 202 SQL 204


>gi|298527727|ref|ZP_07015131.1| Tetratricopeptide TPR_2 repeat protein [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298511379|gb|EFI35281.1| Tetratricopeptide TPR_2 repeat protein [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 794

 Score = 39.7 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 41/127 (32%), Gaps = 19/127 (14%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV----QYSAGKYQQAASLGEE 119
             ++++E  F  A +   Q  R +             +F         G    A ++  E
Sbjct: 273 GAMYMEESRFQDAVQVLEQ-GRAYLGGDY------DLSFALAETYLDMGDVPAARAMLHE 325

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            I + PE         L  +   + +  + YDQ         +  ++ R  +  + +  +
Sbjct: 326 EIKRDPEH--------LRALDAGKYLAGIYYDQGDLDKAAHQLDMVLRRNPDDVHARTMQ 377

Query: 180 FYVTVGR 186
             + + R
Sbjct: 378 GRIFLAR 384


>gi|153838050|ref|ZP_01990717.1| Tol system periplasmic component YbgF [Vibrio parahaemolyticus
           AQ3810]
 gi|149748584|gb|EDM59443.1| Tol system periplasmic component YbgF [Vibrio parahaemolyticus
           AQ3810]
          Length = 251

 Score = 39.7 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 46/130 (35%), Gaps = 15/130 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            Q   D+   +R     +    +  + Y  S Y               A     +G+ Y 
Sbjct: 137 YQNAVDLILKKRDYTGAIAAFQQFQKDYPGSTYS--------------ANSHYWLGQLYF 182

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + +   A+  F  V+ +Y D+    +A+ +L E         +A++    + + YP   
Sbjct: 183 AKKQDKDAVKSFAAVV-SYKDSNKRADALLKLGEIAERNNNAAQAKKYYQQVVDEYPGSA 241

Query: 262 WARYVETLVK 271
            A+   + +K
Sbjct: 242 SAKLAGSKLK 251



 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 49/138 (35%), Gaps = 16/138 (11%)

Query: 50  SVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY--- 105
             T    ++  Y+ AV   LK+++++ A   F Q  +D+P +  +  S      + +   
Sbjct: 126 KYTPNVDEQTAYQNAVDLILKKRDYTGAIAAFQQFQKDYPGSTYSANSHYWLGQLYFAKK 185

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
                 ++ +    Y      +K  D        +  ++      +  A     +Y  ++
Sbjct: 186 QDKDAVKSFAAVVSYKD---SNKRAD--------ALLKLGEIAERNNNAA-QAKKYYQQV 233

Query: 166 VERYTNSPYVKGARFYVT 183
           V+ Y  S   K A   + 
Sbjct: 234 VDEYPGSASAKLAGSKLK 251


>gi|153006594|ref|YP_001380919.1| hypothetical protein Anae109_3756 [Anaeromyxobacter sp. Fw109-5]
 gi|152030167|gb|ABS27935.1| Tetratricopeptide TPR_4 [Anaeromyxobacter sp. Fw109-5]
          Length = 516

 Score = 39.7 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 36/85 (42%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           +              ++  AV + K     +A E   +  ++   + VA  ++L+ A  +
Sbjct: 339 EKLAADPRGGDAANALHNAAVAWDKAGKADRAAEIRERILKEHADSKVAGNNMLLLAVNK 398

Query: 105 YSAGKYQQAASLGEEYITQYPESKN 129
                +  AA L +++I +YP+S N
Sbjct: 399 SKKNDHSGAAKLYDDFIARYPDSPN 423



 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 56/145 (38%), Gaps = 10/145 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           +  A   L E   ++A + F + + D P  G A  +L  +A     AGK  +AA + E  
Sbjct: 319 FAAAQKLLDEGKPAEAAQAFEKLAAD-PRGGDAANALHNAAVAWDKAGKADRAAEIRERI 377

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           + ++ +SK       L+ ++ ++                +     + RY +SP    A  
Sbjct: 378 LKEHADSKVAGNNMLLLAVNKSKKNDHSG--------AAKLYDDFIARYPDSPNRCVALQ 429

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGE 205
            V    + LA K       Y+  G+
Sbjct: 430 NVASELD-LAKKAAPAAERYVTFGK 453


>gi|114570964|ref|YP_757644.1| hypothetical protein Mmar10_2414 [Maricaulis maris MCS10]
 gi|114341426|gb|ABI66706.1| conserved hypothetical protein [Maricaulis maris MCS10]
          Length = 291

 Score = 39.7 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 29/78 (37%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           D+       +  Y     F    +F++A + F    R  P    A  +L+  A   +  G
Sbjct: 195 DNPDHALTAQAQYWLGETFYVRSDFTQAADAFIASLRLQPSGEKAPDALVRLAASLHGMG 254

Query: 109 KYQQAASLGEEYITQYPE 126
           + + A S    +  Q+P 
Sbjct: 255 RTEDACSTLARFGRQFPN 272



 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 8/86 (9%), Positives = 20/86 (23%), Gaps = 8/86 (9%)

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
            +A  +     +  A +  E +I   P+        Y +G ++                 
Sbjct: 171 EAARARLVDSDFIGAQAGFEGFIADNPDHALTAQAQYWLGETFYVRSD--------FTQA 222

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTV 184
                  +    +      A   +  
Sbjct: 223 ADAFIASLRLQPSGEKAPDALVRLAA 248


>gi|51473429|ref|YP_067186.1| hypothetical protein RT0222 [Rickettsia typhi str. Wilmington]
 gi|51459741|gb|AAU03704.1| conserved hypothetical protein [Rickettsia typhi str. Wilmington]
          Length = 242

 Score = 39.7 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 25/67 (37%), Gaps = 5/67 (7%)

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           + F+      P+    +++    A   Y   K  +A    + +I +YP S  +   Y+  
Sbjct: 103 KNFDVNKDIAPY----KQA-YDLALAAYKDNKLTEAKDKFKNFIQKYPNSPLISNAYFWY 157

Query: 138 GMSYAQM 144
              + + 
Sbjct: 158 AECFFKQ 164



 Score = 39.3 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 34/90 (37%), Gaps = 3/90 (3%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
             ++     D   D+   ++ Y+ A+   K+   ++A + F    + +P + +   +   
Sbjct: 97  HDNTPKKNFDVNKDIAPYKQAYDLALAAYKDNKLTEAKDKFKNFIQKYPNSPLISNAYFW 156

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKN 129
            A   +    Y  AA     Y+  Y ES  
Sbjct: 157 YAECFFKQKDYNGAAIN---YLKCYQESPK 183



 Score = 39.3 bits (91), Expect = 0.55,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 39/106 (36%), Gaps = 22/106 (20%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY-VAAIPRFQL 215
                    +++Y NSP +  A F+                  + K+ +Y  AAI     
Sbjct: 132 EAKDKFKNFIQKYPNSPLISNAYFWYAEC--------------FFKQKDYNGAAINY--- 174

Query: 216 VLANYSDAE---HAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
            L  Y ++     + + + +L  +   L  M EA  V+  + + +P
Sbjct: 175 -LKCYQESPKGAKSSDGLLKLALSLGELKKMQEACNVLVTLDKEFP 219


>gi|28868639|ref|NP_791258.1| type IV pilus biogenesis protein PilF [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|213971520|ref|ZP_03399631.1| type IV pilus biogenesis protein PilF [Pseudomonas syringae pv.
           tomato T1]
 gi|301386125|ref|ZP_07234543.1| type IV pilus biogenesis protein PilF [Pseudomonas syringae pv.
           tomato Max13]
 gi|302060175|ref|ZP_07251716.1| type IV pilus biogenesis protein PilF [Pseudomonas syringae pv.
           tomato K40]
 gi|302135118|ref|ZP_07261108.1| type IV pilus biogenesis protein PilF [Pseudomonas syringae pv.
           tomato NCPPB 1108]
 gi|28851877|gb|AAO54953.1| type IV pilus biogenesis protein PilF [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|213923712|gb|EEB57296.1| type IV pilus biogenesis protein PilF [Pseudomonas syringae pv.
           tomato T1]
 gi|331019382|gb|EGH99438.1| type IV pilus biogenesis/stability protein PilW [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 252

 Score = 39.7 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 23/63 (36%), Gaps = 9/63 (14%)

Query: 64  AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
            +  LK  N  +A E F +     R  P      +SLL  A + Y   +Y  A    + +
Sbjct: 148 GMTSLKLGNREQAREQFTKALRLDRQQP------RSLLEMAQLYYEDRQYVPARDYYDRF 201

Query: 121 ITQ 123
              
Sbjct: 202 SQL 204


>gi|54309709|ref|YP_130729.1| hypothetical protein PBPRA2548 [Photobacterium profundum SS9]
 gi|46914147|emb|CAG20927.1| conserved hypothetical protein [Photobacterium profundum SS9]
          Length = 249

 Score = 39.7 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 57/140 (40%), Gaps = 10/140 (7%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
            + +    ++ +    + E YEKAV   LK+++++ A   FN     +P +     +   
Sbjct: 111 SADKPGSGETYSGDISENEAYEKAVNLILKKKDYAGAVTAFNAFLTTYPESTYKANAHYW 170

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
              + ++  K  +A+   +   +    +K  D     +G+  A+  +DV       +L  
Sbjct: 171 LGQLYFTQNKLAEASKEFKAVTSDEKSNKRSD-ALLKLGVI-AERSKDV-------ELAK 221

Query: 160 QYMSRIVERYTNSPYVKGAR 179
           +Y   ++  Y +S   + A 
Sbjct: 222 KYYQEVISTYPSSTSSRQAE 241



 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 40/124 (32%), Gaps = 23/124 (18%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               Y  A +    ++T YPES      +Y +G  Y    +             +     
Sbjct: 140 KKKDYAGAVTAFNAFLTTYPESTYKANAHYWLGQLYFTQNK--------LAEASKEFKA- 190

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           V     S     A   + V   +  +K+VE+ + Y             Q V++ Y  +  
Sbjct: 191 VTSDEKSNKRSDALLKLGVIAER--SKDVELAKKYY------------QEVISTYPSSTS 236

Query: 226 AEEA 229
           + +A
Sbjct: 237 SRQA 240


>gi|218245633|ref|YP_002371004.1| CheR-type MCP methyltransferase with Tpr repeats [Cyanothece sp.
           PCC 8801]
 gi|218166111|gb|ACK64848.1| MCP methyltransferase, CheR-type with Tpr repeats [Cyanothece sp.
           PCC 8801]
          Length = 527

 Score = 39.7 bits (92), Expect = 0.43,   Method: Composition-based stats.
 Identities = 10/74 (13%), Positives = 33/74 (44%), Gaps = 3/74 (4%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           ++    +    +   + ++ E+    ++++N+S + +  ++    +P +  A   L+   
Sbjct: 351 TTTKENISQAIEEVNEIDLLEEVKQLIEQKNYSFSIKKLHKILEKYPNS-FAANYLMAEI 409

Query: 102 FVQYSAGKYQQAAS 115
           +     GKY++A  
Sbjct: 410 YAN--LGKYEEAID 421


>gi|159906151|ref|YP_001549813.1| hypothetical protein MmarC6_1770 [Methanococcus maripaludis C6]
 gi|159887644|gb|ABX02581.1| Tetratricopeptide TPR_2 repeat protein [Methanococcus maripaludis
           C6]
          Length = 393

 Score = 39.7 bits (92), Expect = 0.43,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 68/208 (32%), Gaps = 42/208 (20%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S+ + +  +++ EK + +     + KA E+FN+     P       +            K
Sbjct: 5   SIFETKEPKKMLEKGIGYYNNGKYQKAVEFFNKTISSEPKNP---DAWYFKGNAYQKLDK 61

Query: 110 YQQAASLGEEYITQYPESKNV--DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            + A    E+ ++  P    +  +Y   L                      L+  +  +E
Sbjct: 62  PKLAQDSYEKALSIRPNDPELVKNYAMLL--------------------NSLELFNESIE 101

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
               + Y   +   +T          + I   YLK G +  A+  F  +L      +   
Sbjct: 102 VL-KNVYEPDSE--ITEI--------LGIA--YLKTGRFEEALVEFDKILEKKPKYKQV- 147

Query: 228 EAMARLVEAYVALALMDEA-REVVSLIQ 254
             +A+   A V L   DEA      +++
Sbjct: 148 --LAKKGTALVGLKKFDEALDTYEKVLK 173


>gi|197102768|ref|NP_001127468.1| serine/threonine-protein phosphatase 5 [Pongo abelii]
 gi|55730209|emb|CAH91828.1| hypothetical protein [Pongo abelii]
          Length = 499

 Score = 39.7 bits (92), Expect = 0.43,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 50/154 (32%), Gaps = 30/154 (19%)

Query: 32  VCFLVGWERQSSRDVYLDSVTD--VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
           +    G   + +     +   D  ++   E+  +A  + K +++  A ++++Q     P 
Sbjct: 1   MAMAEGERTECAEPRRDEPPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS 60

Query: 90  AG--VARKSLLMSAF----VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
                  +S    A+       Y+ G   +A  L ++YI            YY    S  
Sbjct: 61  NAIYYGNRS---LAYLRTECYGYALGDATRAIELDKKYIK----------GYYRRAASNM 107

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            +           +  L+    +V+   +    K
Sbjct: 108 AL--------GKFRAALRDYETVVKVKPHDKDAK 133


>gi|331007793|ref|ZP_08330907.1| TPR repeat containing exported protein [gamma proteobacterium
           IMCC1989]
 gi|330418402|gb|EGG92954.1| TPR repeat containing exported protein [gamma proteobacterium
           IMCC1989]
          Length = 266

 Score = 39.7 bits (92), Expect = 0.43,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 1/93 (1%)

Query: 53  DVRYQREVYEKAVLFL-KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           + +    +Y + +  L  +Q++S A   F +    F            +  + ++ G+ +
Sbjct: 142 NSQAANALYSEGISLLLDKQDYSGAKAVFAEYLDRFKGGQYTPNVYYWTGQILFANGEKK 201

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
            AA   E  I++Y     V    + +   Y + 
Sbjct: 202 AAADNFELLISEYGTHSKVPDAQFKLARIYFEQ 234


>gi|307191462|gb|EFN75003.1| Tetratricopeptide repeat protein 21B [Camponotus floridanus]
          Length = 1308

 Score = 39.7 bits (92), Expect = 0.43,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 75/249 (30%), Gaps = 37/249 (14%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           L     +   ++++  L G   + S     D  T        Y KA        F++A  
Sbjct: 579 LENCIKSCQMAMSLAKLSGGSNKKSDMSASDRATLYLELIAAYSKAR------RFAEALA 632

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
              +   +        +  + +A +    G+ + A    +     YP        YYL  
Sbjct: 633 LVEEAKLNLAGTAELERVTISTADIYLDMGELENAVDCLQ---NIYPGQP-----YYLQA 684

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP-YVKGARFYV--TVGRNQLAAKE-- 193
            +    I       R      +    +VE    S  Y      Y+        + A E  
Sbjct: 685 HTKLAEINLNYRKDRQAFA--KCFRELVEHCPGSKTYSMLGNAYMSIQEPERAIEAYEQA 742

Query: 194 --------VEIG----RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
                   V+I     +  +K  +Y  AI  ++ ++   +      +    L + Y+ + 
Sbjct: 743 LSQNPVDKVDIANKMGKALVKAHQYAKAINYYKDIVKQDNCTTLKLD----LAKLYMKMK 798

Query: 242 LMDEAREVV 250
             D+A   +
Sbjct: 799 QYDKAEATL 807


>gi|220910314|ref|YP_002485625.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC
           7425]
 gi|219866925|gb|ACL47264.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425]
          Length = 155

 Score = 39.7 bits (92), Expect = 0.43,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 43/110 (39%), Gaps = 18/110 (16%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           ++   L++ +  +A E   +   + P FA    R+++L      Y+ G Y++A +  E+ 
Sbjct: 46  RSQDLLEQGDVEEAKEILTELVEEQPDFAEAWNRRAVL-----YYTQGDYRRAIADCEQV 100

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           I   P         + +G+ +A +   V          +    R +E   
Sbjct: 101 IRLVPYHFG---ALHGLGLCHAAVGEYV--------AAIAAFRRALELQP 139


>gi|147919338|ref|YP_686926.1| hypothetical protein RCIX2537 [uncultured methanogenic archaeon
           RC-I]
 gi|110622322|emb|CAJ37600.1| hypothetical protein RCIX2537 [uncultured methanogenic archaeon
           RC-I]
          Length = 310

 Score = 39.7 bits (92), Expect = 0.43,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 61/174 (35%), Gaps = 16/174 (9%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
            +   D  TD    +  +E  + F    N+ +A E F + S   P    A +   +    
Sbjct: 11  EEEKFDLSTDQEIDQH-FEAGMDFRDMGNYGRAVEEFRKMSELEPDDAEAHR---LLGEA 66

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
            Y  G Y++A    ++ I       + DY    Y   + YA+M R+    Q         
Sbjct: 67  LYRNGAYEEALKEFDKAIQL-----DEDYTEARYWKSIVYAKMGREKESSQEYRTAYDSD 121

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG--RYYLKRGEYVAAIPRF 213
              +   Y  +  V  A  Y    R     +++ I    YY  R +  +A+ R 
Sbjct: 122 PEDVELMYEWAKEVAAAGKYYEAIR---VYRDILIAHPEYYEARVDLGSALIRA 172



 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 70/236 (29%), Gaps = 51/236 (21%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
           +G E++SS++      +D      +YE A        + +A   +       P       
Sbjct: 104 MGREKESSQEYRTAYDSDPEDVELMYEWAKEVAAAGKYYEAIRVYRDILIAHP--EYYE- 160

Query: 96  SLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
           + +        AG       +Y  A +         P++  +    +++G    + +  +
Sbjct: 161 ARVDLGSALIRAGKENEGYEEYALARASD-------PDNPMIP---FMIG----EFLLSM 206

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
                     L       E   N                        IG    ++G    
Sbjct: 207 DR----LDEALDAFKSAQELSPN---APDVYRR--------------IGDVLHRKGRVDE 245

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSL--IQERYPQGY 261
           AI  ++  +       H  E  A L + Y+   + D+A RE   +  ++  +P   
Sbjct: 246 AISEYKKAIR---QKPHDVELHAGLGDLYLEKGMKDDAVREYRRVKKLEPEFPLSE 298


>gi|109465788|ref|XP_001059136.1| PREDICTED: tetratricopeptide repeat domain 37 [Rattus norvegicus]
          Length = 1563

 Score = 39.7 bits (92), Expect = 0.43,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 46/133 (34%), Gaps = 10/133 (7%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVR-YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
           A+  L            LD ++D       +  + +  L      KA +        +P 
Sbjct: 359 ALLKLSDCASLEEAVHILDQLSDTDNTPGLLVLQGLACLNTGAIDKATKIMEDLVASYP- 417

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
             ++    L  A+V ++   Y QA +  +  +    +   V   +Y +G++Y  M  +  
Sbjct: 418 -DLSEAHALE-AYVHFTKKDYVQAETSFQRALE---KDAEVAEYHYQLGLTYWLMGEETR 472

Query: 150 YDQRATKLMLQYM 162
            D+      L + 
Sbjct: 473 KDRT---KALNHF 482


>gi|119357636|ref|YP_912280.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266]
 gi|119354985|gb|ABL65856.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266]
          Length = 3560

 Score = 39.7 bits (92), Expect = 0.43,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 62/174 (35%), Gaps = 23/174 (13%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
            + +A   + +     P    A  +    A + Y + +Y++A +  +  I   P     D
Sbjct: 132 RYEEALASYEKAIAINP--DFAE-AYYNRAVIFYDSDRYEEALASYDRAIVLKP-----D 183

Query: 132 Y--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
           Y   Y   G  Y ++ R       + K  +       E Y N   +  A   +      L
Sbjct: 184 YVEAYANRGNVYLKLKRYEDA-LGSYKKAIALKLECDEAYYN---MGNALLELQRYEEAL 239

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQL--VLANYSDA-EHAEEAMARL---VEAY 237
           A+ E  I    LK   + A   R  +  VL  Y DA    E+A+A      EAY
Sbjct: 240 ASYEKAIA---LKVDYFEAYSNRGVVLLVLRRYEDALVSYEKAIALKPHHAEAY 290



 Score = 39.3 bits (91), Expect = 0.57,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 41/131 (31%), Gaps = 21/131 (16%)

Query: 103  VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
                  +Y++A +  E  I   P   +    Y   G +  +M +         K  L+  
Sbjct: 2980 ALQELKRYEEALASYERAIVLKP---DYADAYSNRGNTLMKMNQ--------YKEALESY 3028

Query: 163  SRIVERYTNSPYV----KGARFYVTVGRNQLAAKEVEI------GRYYLKRGEYVAAIPR 212
             R +     +         A   +      LA+ E  I         Y  RG  +  + R
Sbjct: 3029 ERAIALKPENADACFHQGNALQELKRYNESLASYEKAIALKSVNAEVYAHRGVVLQKLSR 3088

Query: 213  FQLVLANYSDA 223
            F+  + NY  A
Sbjct: 3089 FEDAVLNYKQA 3099



 Score = 36.6 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 25/66 (37%), Gaps = 9/66 (13%)

Query: 64   AVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
            A +  + + ++ A   F    +   D P +              +  G+Y++A +  E+ 
Sbjct: 2265 ASMATRRKKYTDAVSLFERALEIDPDHPVSWCT------LGIALHELGRYEEALASYEKA 2318

Query: 121  ITQYPE 126
            I  YP 
Sbjct: 2319 IVLYPG 2324


>gi|330872881|gb|EGH07030.1| type IV pilus biogenesis/stability protein PilW [Pseudomonas
           syringae pv. morsprunorum str. M302280PT]
          Length = 252

 Score = 39.7 bits (92), Expect = 0.44,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 23/63 (36%), Gaps = 9/63 (14%)

Query: 64  AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
            +  LK  N  +A E F +     R  P      +SLL  A + Y   +Y  A    + +
Sbjct: 148 GMTSLKLGNREQAREQFTKALRLDRQQP------RSLLEMAQLYYEDRQYVPARDYYDRF 201

Query: 121 ITQ 123
              
Sbjct: 202 SQL 204


>gi|225549799|ref|ZP_03770763.1| FF domain protein [Borrelia burgdorferi 118a]
 gi|225369607|gb|EEG99056.1| FF domain protein [Borrelia burgdorferi 118a]
          Length = 1119

 Score = 39.7 bits (92), Expect = 0.44,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 3/62 (4%)

Query: 60   VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            +Y KA + LK+ N+  A   ++      P       + +  A     +G   QA S  E+
Sbjct: 948  LYLKASINLKKGNYQNAISLYSLVIEKNPEN---TSAYINLAKAYEKSGNKSQAISTLEK 1004

Query: 120  YI 121
             I
Sbjct: 1005 II 1006



 Score = 39.3 bits (91), Expect = 0.55,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 74/220 (33%), Gaps = 44/220 (20%)

Query: 62   EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLG 117
            +  ++     NF ++ +Y N       F   A+K    ++   +  ++   K +++    
Sbjct: 881  KAGIVSNNLGNFKQSEKYLNF------FNANAKKPNEIAIYNLSIAKFENNKLEESLETI 934

Query: 118  EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYV 175
             + I   P  +  +Y  YL      +            +  +   S ++E+     S Y+
Sbjct: 935  NKAIDLNP--EKSEY-LYLKASINLKK--------GNYQNAISLYSLVIEKNPENTSAYI 983

Query: 176  KGARFYVTVGRNQLAAKEVE-------------IGRYYLKRGEYVAAIPRFQLVLANYSD 222
              A+ Y   G    A   +E             +G  Y K   Y  AI  F+  + N   
Sbjct: 984  NLAKAYEKSGNKSQAISTLEKIINKNNKLALNNLGILYKKEKNYQKAIEIFEKAIIN--- 1040

Query: 223  AEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQ 259
                 EA   L    + +     A++++     ++   P+
Sbjct: 1041 --SDIEAKYNLATTLIEINDNTRAKDLLREYTKLKPNNPE 1078



 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 41/279 (14%), Positives = 83/279 (29%), Gaps = 74/279 (26%)

Query: 29   SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSR 85
            ++A  +    +   + + Y   +     Q + Y+  ++  K + +  + E F+   +   
Sbjct: 747  TLAQAYENNGDLLKAENAYEKIIKLTNTQEDHYKLGIIRFKLKKYEHSIESFDQTIKLDP 806

Query: 86   DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
                    +K+L           K ++A    E+ I      KN    YY  G++     
Sbjct: 807  KH------KKALHNKGIALMMLNKNKKAIESFEKAIQI---DKNYSTAYYQKGIA----- 852

Query: 146  RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------------RFYVTVGR------ 186
             +   D +      +    + ++  N  Y   A               Y+          
Sbjct: 853  EEKNGDMQQAFESFKNAYNLDKK-PN--YALKAGIVSNNLGNFKQSEKYLNFFNANAKKP 909

Query: 187  NQLAAKEVEIGRY------------------------Y--------LKRGEYVAAIPRFQ 214
            N++A   + I ++                        Y        LK+G Y  AI  + 
Sbjct: 910  NEIAIYNLSIAKFENNKLEESLETINKAIDLNPEKSEYLYLKASINLKKGNYQNAISLYS 969

Query: 215  LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            LV+    +   A      L +AY       +A   +  I
Sbjct: 970  LVIEKNPENTSAY---INLAKAYEKSGNKSQAISTLEKI 1005



 Score = 35.5 bits (81), Expect = 9.1,   Method: Composition-based stats.
 Identities = 11/124 (8%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
            +   ++  D +  + +   A  +    +  KA   + +  +        ++       +
Sbjct: 732 NEFLKNNPNDAQASKTL---AQAYENNGDLLKAENAYEKIIKL----TNTQEDHYKLGII 784

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           ++   KY+ +    ++ I   P+ K      +  G++   + ++        K  ++   
Sbjct: 785 RFKLKKYEHSIESFDQTIKLDPKHKK---ALHNKGIALMMLNKN--------KKAIESFE 833

Query: 164 RIVE 167
           + ++
Sbjct: 834 KAIQ 837


>gi|34540729|ref|NP_905208.1| TPR domain-containing protein [Porphyromonas gingivalis W83]
 gi|34397043|gb|AAQ66107.1| TPR domain protein [Porphyromonas gingivalis W83]
          Length = 750

 Score = 39.7 bits (92), Expect = 0.44,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 53/126 (42%), Gaps = 16/126 (12%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFP 88
            C++VG   ++ +D       D ++    Y + V + K+ ++ +A + F++       F 
Sbjct: 34  GCYIVGSYEEAIKDYSKAIELDGKFIPAYYNRGVAYFKKGSYEEAIKDFSKAIELDDKFV 93

Query: 89  FAGVARKSLLMSAFVQ---YSA--GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
            A   R     +A+ +   Y      Y QA  L ++YI  Y   + V Y     G SY +
Sbjct: 94  HAYHGR----GNAYSKKGWYKKAIKDYSQAIELDDKYILGY-NGRGVAYCE--KG-SYEE 145

Query: 144 MIRDVP 149
            I+D  
Sbjct: 146 AIKDYS 151


>gi|15594555|ref|NP_212344.1| surface-located membrane protein 1 (lmp1) [Borrelia burgdorferi B31]
 gi|13324578|gb|AAK18792.1|AF305600_1 LMP1 [Borrelia burgdorferi]
 gi|13324582|gb|AAK18794.1|AF305602_1 LMP1 [Borrelia burgdorferi]
 gi|13324586|gb|AAK18796.1|AF305604_1 LMP1 [Borrelia burgdorferi]
 gi|13324590|gb|AAK18798.1|AF305606_1 LMP1 [Borrelia burgdorferi]
 gi|2688100|gb|AAC66595.1| surface-located membrane protein 1 (lmp1) [Borrelia burgdorferi B31]
          Length = 1119

 Score = 39.7 bits (92), Expect = 0.44,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 44/220 (20%)

Query: 62   EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLG 117
            +  ++     NF ++ EY N       F   A+K    ++   +  ++   K +++    
Sbjct: 881  KAGIVSNNLGNFKQSEEYLNF------FNANAKKPNEIAIYNLSIAKFENNKLEESLETI 934

Query: 118  EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYV 175
             + I   P  +  +Y  YL      +            +  +   S ++E+     S Y+
Sbjct: 935  NKAIDLNP--EKSEY-LYLKASINLKK--------ENYQNAISLYSLVIEKNPENTSAYI 983

Query: 176  KGARFYVTVGRNQLAAKEVE-------------IGRYYLKRGEYVAAIPRFQLVLANYSD 222
              A+ Y   G    A   +E             +G  Y K   Y  AI  F+  + N   
Sbjct: 984  NLAKAYEKSGNKSQAISTLEKIINKNNKLALNNLGILYKKEKNYQKAIEIFEKAIIN--- 1040

Query: 223  AEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQ 259
                 EA   L    + +     A++++     ++   P+
Sbjct: 1041 --SDIEAKYNLATTLIEINDNTRAKDLLREYTKLKPNNPE 1078



 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 3/62 (4%)

Query: 60   VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            +Y KA + LK++N+  A   ++      P       + +  A     +G   QA S  E+
Sbjct: 948  LYLKASINLKKENYQNAISLYSLVIEKNPEN---TSAYINLAKAYEKSGNKSQAISTLEK 1004

Query: 120  YI 121
             I
Sbjct: 1005 II 1006



 Score = 35.5 bits (81), Expect = 7.7,   Method: Composition-based stats.
 Identities = 11/124 (8%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
            +   ++  D +  + +   A  +    +  KA   + +  +        ++       +
Sbjct: 732 NEFLKNNPNDAQASKTL---AQAYENNGDLLKAENAYEKIIKL----TNTQEDHYKLGII 784

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           ++   KY+ +    ++ I   P+ K      +  G++   + ++        K  ++   
Sbjct: 785 RFKLKKYEHSIESFDQTIKLDPKHKK---ALHNKGIALMMLNKN--------KKAIESFE 833

Query: 164 RIVE 167
           + ++
Sbjct: 834 KAIQ 837



 Score = 35.5 bits (81), Expect = 8.1,   Method: Composition-based stats.
 Identities = 39/279 (13%), Positives = 77/279 (27%), Gaps = 74/279 (26%)

Query: 29   SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSR 85
            ++A  +    +   + + Y   +     Q + Y+  ++  K + +  + E F+   +   
Sbjct: 747  TLAQAYENNGDLLKAENAYEKIIKLTNTQEDHYKLGIIRFKLKKYEHSIESFDQTIKLDP 806

Query: 86   DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
                    +K+L           K ++A    E+ I      KN    YY  G++  +  
Sbjct: 807  KH------KKALHNKGIALMMLNKNKKAIESFEKAIQI---DKNYGTAYYQKGIAEEKN- 856

Query: 146  RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------------RFYVTVGR------ 186
                      +              N  Y   A               Y+          
Sbjct: 857  -------GDMQQAFASFKNAYNLDKNPNYALKAGIVSNNLGNFKQSEEYLNFFNANAKKP 909

Query: 187  NQLAAKEVEIGRY------------------------Y--------LKRGEYVAAIPRFQ 214
            N++A   + I ++                        Y        LK+  Y  AI  + 
Sbjct: 910  NEIAIYNLSIAKFENNKLEESLETINKAIDLNPEKSEYLYLKASINLKKENYQNAISLYS 969

Query: 215  LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            LV+    +   A      L +AY       +A   +  I
Sbjct: 970  LVIEKNPENTSAY---INLAKAYEKSGNKSQAISTLEKI 1005


>gi|315182005|gb|ADT88918.1| hypothetical protein vfu_B00697 [Vibrio furnissii NCTC 11218]
          Length = 653

 Score = 39.7 bits (92), Expect = 0.44,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 33/86 (38%), Gaps = 17/86 (19%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCS----RDF----------PFAGVAR---KSLLMSAFVQ 104
           ++A+   +++++  A E F          +           F+ V+    +S    A   
Sbjct: 349 QQAMQAFEQKDYQHAAEQFTDPQWQGIARYEAKDYQGAIDAFSQVSAPDSRSQYNLANAY 408

Query: 105 YSAGKYQQAASLGEEYITQYPESKNV 130
             AG+ +QA    ++ +   P++ + 
Sbjct: 409 AQAGQLEQARDRYQQLLQTDPDNADA 434


>gi|299140488|ref|ZP_07033626.1| aerotolerance-related exported protein [Prevotella oris C735]
 gi|298577454|gb|EFI49322.1| aerotolerance-related exported protein [Prevotella oris C735]
          Length = 255

 Score = 39.7 bits (92), Expect = 0.44,   Method: Composition-based stats.
 Identities = 10/69 (14%), Positives = 23/69 (33%), Gaps = 4/69 (5%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            +A    +E+ + +A + +         +GV+           Y  G   +A    E   
Sbjct: 31  AEADKAYQEKKYQQAIKDYESL--LH--SGVSASLYYNLGNAYYRTGNITKAILNYERAA 86

Query: 122 TQYPESKNV 130
              P + ++
Sbjct: 87  LLEPGNSDI 95


>gi|218780060|ref|YP_002431378.1| hypothetical protein Dalk_2217 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218761444|gb|ACL03910.1| TPR repeat-containing protein [Desulfatibacillum alkenivorans
           AK-01]
          Length = 702

 Score = 39.7 bits (92), Expect = 0.44,   Method: Composition-based stats.
 Identities = 31/231 (13%), Positives = 61/231 (26%), Gaps = 59/231 (25%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
             +A+    G +  + ++          + +  Y   +    ++   KA  YF +     
Sbjct: 443 LGLALAH-AGRDDDAFKEFQKAVELKPDFAQANYNIGISLGHQEEHEKAIPYFEKAVEKE 501

Query: 88  PFAGVARKSLL--MSAFVQYSAGKYQQAASLGEEYITQY----------PESKNVDYVYY 135
           P        L     A     AG+ + A +        Y          P   N+     
Sbjct: 502 P-----ENVLYLNDLALAYMGAGRLEDAIT------RLYQALRIEPEYAPTHNNLGVAL- 549

Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
                           Q      L++  + VE Y +  Y   A   + +    L      
Sbjct: 550 --------------GGQAMVTQALEHFRKAVEIYPD--YA-DAHRNLGILLGNLDNHPKA 592

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
           I  +              + V+          +A   L  +Y A+   ++A
Sbjct: 593 IAEF--------------EKVIKLLPR---DPQANFLLGRSYAAVGKYEKA 626


>gi|159899989|ref|YP_001546236.1| TPR repeat-containing serine/threonin protein kinase [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159893028|gb|ABX06108.1| serine/threonine protein kinase with TPR repeats [Herpetosiphon
           aurantiacus ATCC 23779]
          Length = 916

 Score = 39.7 bits (92), Expect = 0.44,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 39/126 (30%), Gaps = 13/126 (10%)

Query: 67  FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
               ++  KA E F +     P       ++   A   Y    Y +A  L E+ I   P 
Sbjct: 778 LYDTKDTDKAIETFKKALERDP--EY-PNAIAGLADTYYDTRYYDEALKLYEQTINLQP- 833

Query: 127 SKNVDYV-YYL-VGMSYAQMIR-DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
               DY   YL            D   DQ +T   L Y   +   Y    Y   A+  + 
Sbjct: 834 ----DYATAYLGKANILYNNKDYDAAIDQYST--ALDYNPSLKNAYIGKAYCYQAKGDID 887

Query: 184 VGRNQL 189
             R  L
Sbjct: 888 EARQVL 893



 Score = 39.7 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 63/187 (33%), Gaps = 43/187 (22%)

Query: 70  EQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQ-YSAGKYQQAASLGEEYITQYPE 126
           + +++ A   +     + P   +       +   +V  Y      +A    ++ + + PE
Sbjct: 746 QSDYAAAIRDYEAAIAEAPSWLSVY-----VDLGYVYLYDTKDTDKAIETFKKALERDPE 800

Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYVKGARFYVTV 184
             N      + G++      D  YD R     L+   + +    +  + Y+  A      
Sbjct: 801 YPNA-----IAGLA------DTYYDTRYYDEALKLYEQTINLQPDYATAYLGKA------ 843

Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
             N L               +Y AAI ++   L      ++A    A     Y A   +D
Sbjct: 844 --NIL-----------YNNKDYDAAIDQYSTALDYNPSLKNAYIGKAY---CYQAKGDID 887

Query: 245 EAREVVS 251
           EAR+V+ 
Sbjct: 888 EARQVLQ 894


>gi|13324592|gb|AAK18799.1|AF305607_1 LMP1 [Borrelia burgdorferi]
          Length = 1065

 Score = 39.7 bits (92), Expect = 0.44,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 44/220 (20%)

Query: 62   EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLG 117
            +  ++     NF ++ EY N       F   A+K    ++   +  ++   K +++    
Sbjct: 827  KAGIVSNNLGNFKQSEEYLNF------FNANAKKPNEIAIYNLSIAKFENNKLEESLETI 880

Query: 118  EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYV 175
             + I   P  +  +Y  YL      +            +  +   S ++E+     S Y+
Sbjct: 881  NKAIDLNP--EKSEY-LYLKASINLKK--------ENYQNAISLYSLVIEKNPENTSAYI 929

Query: 176  KGARFYVTVGRNQLAAKEVE-------------IGRYYLKRGEYVAAIPRFQLVLANYSD 222
              A+ Y   G    A   +E             +G  Y K   Y  AI  F+  + N   
Sbjct: 930  NLAKAYEKSGNKSQAISTLEKIINKNNKLALNNLGILYKKEKNYQKAIEIFEKAIIN--- 986

Query: 223  AEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQ 259
                 EA   L    + +     A++++     ++   P+
Sbjct: 987  --SDIEAKYNLATTLIEINDNTRAKDLLREYTKLKPNNPE 1024



 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 3/62 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y KA + LK++N+  A   ++      P       + +  A     +G   QA S  E+
Sbjct: 894 LYLKASINLKKENYQNAISLYSLVIEKNPEN---TSAYINLAKAYEKSGNKSQAISTLEK 950

Query: 120 YI 121
            I
Sbjct: 951 II 952



 Score = 35.9 bits (82), Expect = 6.1,   Method: Composition-based stats.
 Identities = 11/124 (8%), Positives = 44/124 (35%), Gaps = 18/124 (14%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
            +   ++  D +  + +   A  +    +  KA   + + ++        ++       +
Sbjct: 678 NEFLKNNPNDAQASKTL---AQAYENNGDLLKAENAYEKITKL----TNTQEDHYKLGII 730

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           ++   KY+ +    ++ I   P+ K      +  G++   + ++        K  ++   
Sbjct: 731 RFKLKKYEHSIESFDQTIKLDPKHKK---ALHNKGIALMMLNKN--------KKAIESFE 779

Query: 164 RIVE 167
           + ++
Sbjct: 780 KAIQ 783



 Score = 35.5 bits (81), Expect = 8.9,   Method: Composition-based stats.
 Identities = 39/279 (13%), Positives = 76/279 (27%), Gaps = 74/279 (26%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSR 85
           ++A  +    +   + + Y         Q + Y+  ++  K + +  + E F+   +   
Sbjct: 693 TLAQAYENNGDLLKAENAYEKITKLTNTQEDHYKLGIIRFKLKKYEHSIESFDQTIKLDP 752

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
                   +K+L           K ++A    E+ I      KN    YY  G++  +  
Sbjct: 753 KH------KKALHNKGIALMMLNKNKKAIESFEKAIQI---DKNYGTAYYQKGIAEEKN- 802

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------------RFYVTVGR------ 186
                     +              N  Y   A               Y+          
Sbjct: 803 -------GDMQQAFASFKNAYNLDKNPNYALKAGIVSNNLGNFKQSEEYLNFFNANAKKP 855

Query: 187 NQLAAKEVEIGRY------------------------Y--------LKRGEYVAAIPRFQ 214
           N++A   + I ++                        Y        LK+  Y  AI  + 
Sbjct: 856 NEIAIYNLSIAKFENNKLEESLETINKAIDLNPEKSEYLYLKASINLKKENYQNAISLYS 915

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           LV+    +   A      L +AY       +A   +  I
Sbjct: 916 LVIEKNPENTSAY---INLAKAYEKSGNKSQAISTLEKI 951


>gi|300864595|ref|ZP_07109454.1| putative Tetratricopeptide repeat domain protein [Oscillatoria sp.
           PCC 6506]
 gi|300337419|emb|CBN54602.1| putative Tetratricopeptide repeat domain protein [Oscillatoria sp.
           PCC 6506]
          Length = 851

 Score = 39.7 bits (92), Expect = 0.44,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 88/254 (34%), Gaps = 51/254 (20%)

Query: 45  DVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAY----EYFNQCSRDFPFAGVARKSLLM 99
           +    +  ++    E Y  +    L +  +++             ++ P     ++ L  
Sbjct: 541 ERLKSNHPELFLNVEDYINEGNSLLSQGRYNEVISNCDRALE-IKQNCP-EIWYQRGL-- 596

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
               Q+   ++++A +  +  I    +  N+   +Y  G++  ++        R  +  +
Sbjct: 597 ---AQWELQQFEEAKAAFDRAIELKTDDANI---WYHRGITLKEL--------RRYEAAI 642

Query: 160 QYMSRIVERYTNSPYVK----GARFYVTVGRNQLA--AKEVEIGRYYLKRGEYVAAIPRF 213
              ++++E              A   +    + +A   K +EI   Y  R  +V    R 
Sbjct: 643 ADFNQVLEIQPQDSKAWLHRGLALAKLKRAEDAIASFDKAIEINPDY--REAWV---NRG 697

Query: 214 ---------QLVLANYSDAEHAE--EAMARLVEAYVALALMDEAREVVS----LIQERYP 258
                    +    ++  A H E  +A+A L    +AL +++   E ++     I+  Y 
Sbjct: 698 VALGTLQQEEEAFKSFDRAVHVEPDDAVAWLNRG-LALGVLERYEEAIASFDKSIELNYE 756

Query: 259 QGY-WARYVETLVK 271
               W    E LVK
Sbjct: 757 SYKAWNSRGEILVK 770


>gi|297690841|ref|XP_002822814.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP4-like [Pongo
           abelii]
          Length = 459

 Score = 39.7 bits (92), Expect = 0.44,   Method: Composition-based stats.
 Identities = 18/146 (12%), Positives = 46/146 (31%), Gaps = 30/146 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARKSL-------LMSAFVQYSAGK 109
           E+  ++ KE  + +A   + +      +        A+K+        L  A        
Sbjct: 275 ERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQA 334

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           +  A     + +     ++      +  G ++  +           +L      ++++ Y
Sbjct: 335 FSAAIESCNKALELDSNNEKG---LFRRGEAHLAVND--------FELARADFQKVLQLY 383

Query: 170 TNSPYVKGARFYVTVG----RNQLAA 191
            ++     A+  + V     R QLA 
Sbjct: 384 PSNK---AAKTQLAVCQQRIRRQLAR 406


>gi|195998427|ref|XP_002109082.1| hypothetical protein TRIADDRAFT_52748 [Trichoplax adhaerens]
 gi|190589858|gb|EDV29880.1| hypothetical protein TRIADDRAFT_52748 [Trichoplax adhaerens]
          Length = 548

 Score = 39.7 bits (92), Expect = 0.44,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 39/109 (35%), Gaps = 22/109 (20%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQ--------CSRDFPFAGVARKS--LLMSAF 102
                +  Y  AV+   +    KA E F +           ++P     ++S   +    
Sbjct: 184 HTDVAQSYYNLAVVKKTQGKDDKALELFEKSLEIYLLLLDDNYP---DIKQSFIYINIGK 240

Query: 103 VQYSAGKYQQAASLGEE-------YITQYPESKNVDYVYYLVGMSYAQM 144
           + Y   +Y +A ++ E+       ++    +  +V Y+Y  +G  Y   
Sbjct: 241 IYYRLKRYDEALAMYEKSLNAKLLFLDN--DHPDVAYLYSKMGNVYDDQ 287


>gi|216264585|ref|ZP_03436577.1| FF domain protein [Borrelia burgdorferi 156a]
 gi|215981058|gb|EEC21865.1| FF domain protein [Borrelia burgdorferi 156a]
          Length = 1173

 Score = 39.7 bits (92), Expect = 0.44,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 44/220 (20%)

Query: 62   EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLG 117
            +  ++     NF ++ EY N       F   A+K    ++   +  ++   K +++    
Sbjct: 935  KAGIVSNNLGNFKQSEEYLNF------FNANAKKPNEIAIYNLSIAKFENNKLEESLETI 988

Query: 118  EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYV 175
             + I   P  +  +Y  YL      +            +  +   S ++E+     S Y+
Sbjct: 989  NKAIDLNP--EKSEY-LYLKASINLKK--------ENYQNAISLYSLVIEKNPENTSAYI 1037

Query: 176  KGARFYVTVGRNQLAAKEVE-------------IGRYYLKRGEYVAAIPRFQLVLANYSD 222
              A+ Y   G    A   +E             +G  Y K   Y  AI  F+  + N   
Sbjct: 1038 NLAKAYEKSGNKSQAISTLEKIINKNNKLALNNLGILYKKEKNYQKAIEIFEKAIIN--- 1094

Query: 223  AEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQ 259
                 EA   L    + +     A++++     ++   P+
Sbjct: 1095 --SDIEAKYNLATTLIEINDNTRAKDLLREYTKLKPNNPE 1132



 Score = 37.8 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 3/62 (4%)

Query: 60   VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            +Y KA + LK++N+  A   ++      P       + +  A     +G   QA S  E+
Sbjct: 1002 LYLKASINLKKENYQNAISLYSLVIEKNPEN---TSAYINLAKAYEKSGNKSQAISTLEK 1058

Query: 120  YI 121
             I
Sbjct: 1059 II 1060



 Score = 35.5 bits (81), Expect = 7.7,   Method: Composition-based stats.
 Identities = 11/124 (8%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
            +   ++  D +  + +   A  +    +  KA   + +  +        ++       +
Sbjct: 786 NEFLKNNPNDAQASKTL---AQAYENNGDLLKAENAYEKIIKL----TNTQEDHYKLGII 838

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           ++   KY+ +    ++ I   P+ K      +  G++   + ++        K  ++   
Sbjct: 839 RFKLKKYEHSIESFDQTIKLDPKHKK---ALHNKGIALMMLNKN--------KKAIESFE 887

Query: 164 RIVE 167
           + ++
Sbjct: 888 KAIQ 891



 Score = 35.5 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 39/279 (13%), Positives = 77/279 (27%), Gaps = 74/279 (26%)

Query: 29   SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSR 85
            ++A  +    +   + + Y   +     Q + Y+  ++  K + +  + E F+   +   
Sbjct: 801  TLAQAYENNGDLLKAENAYEKIIKLTNTQEDHYKLGIIRFKLKKYEHSIESFDQTIKLDP 860

Query: 86   DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
                    +K+L           K ++A    E+ I      KN    YY  G++  +  
Sbjct: 861  KH------KKALHNKGIALMMLNKNKKAIESFEKAIQI---DKNYGTAYYQKGIAEEKN- 910

Query: 146  RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------------RFYVTVGR------ 186
                      +              N  Y   A               Y+          
Sbjct: 911  -------GDMQQAFASFKNAYNLDKNPNYALKAGIVSNNLGNFKQSEEYLNFFNANAKKP 963

Query: 187  NQLAAKEVEIGRY------------------------Y--------LKRGEYVAAIPRFQ 214
            N++A   + I ++                        Y        LK+  Y  AI  + 
Sbjct: 964  NEIAIYNLSIAKFENNKLEESLETINKAIDLNPEKSEYLYLKASINLKKENYQNAISLYS 1023

Query: 215  LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            LV+    +   A      L +AY       +A   +  I
Sbjct: 1024 LVIEKNPENTSAY---INLAKAYEKSGNKSQAISTLEKI 1059


>gi|291613009|ref|YP_003523166.1| hypothetical protein Slit_0539 [Sideroxydans lithotrophicus ES-1]
 gi|291583121|gb|ADE10779.1| Tetratricopeptide TPR_2 repeat protein [Sideroxydans lithotrophicus
           ES-1]
          Length = 544

 Score = 39.7 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 15/101 (14%), Positives = 36/101 (35%), Gaps = 14/101 (13%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSR----DFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
            + +    +K + +  A   F + +       P            A    ++G+YQ+A  
Sbjct: 433 YFNRGQALMKAKKWEAAASDFERSAAISPQLAPIHRY-------LADAYSNSGQYQKALI 485

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
             ++ I      ++    Y+  GM   ++ R+    Q+  +
Sbjct: 486 QYDQAIDLN--HRDAG-TYFGKGMVLKRLHRNDEARQQMVR 523


>gi|188993860|ref|YP_001905870.1| hypothetical protein xccb100_4465 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167735620|emb|CAP53838.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris]
          Length = 919

 Score = 39.7 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 39/126 (30%), Gaps = 18/126 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           E+ +   KE+ ++ A E F +  +  P    A  +     FV Y   +Y +AA   E  +
Sbjct: 810 ERGLQLYKEKRYADAAEQFAEALKLRP--DFA-LAANNLGFVYYRQERYAEAARWLENTL 866

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPY--DQRATKLMLQYMSRIVERYTNSPYVKGAR 179
              P             ++Y  +        D+   +        +          + AR
Sbjct: 867 KIDPS----------RAVAYLNLGDAYAKAGDREKARKAYTTYLALQ---PQGAGAEQAR 913

Query: 180 FYVTVG 185
             +   
Sbjct: 914 AQLQTL 919


>gi|221217537|ref|ZP_03589007.1| surface-located membrane protein 1 [Borrelia burgdorferi 72a]
 gi|13324584|gb|AAK18795.1|AF305603_1 LMP1 [Borrelia burgdorferi]
 gi|221192600|gb|EEE18817.1| surface-located membrane protein 1 [Borrelia burgdorferi 72a]
          Length = 1011

 Score = 39.7 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 3/62 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y KA + LK+ N+  A   ++      P       + +  A     +G   QA S  E+
Sbjct: 840 LYLKASINLKKGNYQNAISLYSLVIEKNPEN---TSAYINLAKAYEKSGNKSQAISTLEK 896

Query: 120 YI 121
            I
Sbjct: 897 II 898



 Score = 39.3 bits (91), Expect = 0.59,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 74/220 (33%), Gaps = 44/220 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLG 117
           +  ++     NF ++ +Y N       F   A+K    ++   +  ++   K +++    
Sbjct: 773 KAGIVSNNLGNFKQSEKYLNF------FNANAKKPNEIAIYNLSIAKFENNKLEESLETI 826

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYV 175
            + I   P  +  +Y  YL      +            +  +   S ++E+     S Y+
Sbjct: 827 NKAIDLNP--EKSEY-LYLKASINLKK--------GNYQNAISLYSLVIEKNPENTSAYI 875

Query: 176 KGARFYVTVGRNQLAAKEVE-------------IGRYYLKRGEYVAAIPRFQLVLANYSD 222
             A+ Y   G    A   +E             +G  Y K   Y  AI  F+  + N   
Sbjct: 876 NLAKAYEKSGNKSQAISTLEKIINKNNKLALNNLGILYKKEKNYQKAIEIFEKAIIN--- 932

Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQ 259
                EA   L    + +     A++++     ++   P+
Sbjct: 933 --SDIEAKYNLATTLIEINDNTRAKDLLREYTKLKPNNPE 970



 Score = 35.9 bits (82), Expect = 5.9,   Method: Composition-based stats.
 Identities = 41/279 (14%), Positives = 83/279 (29%), Gaps = 74/279 (26%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSR 85
           ++A  +    +   + + Y   +     Q + Y+  ++  K + +  + E F+   +   
Sbjct: 639 TLAQAYENNGDLLKAENAYEKIIKLTNTQEDHYKLGIIRFKLKKYEHSIESFDQTIKLDP 698

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
                   +K+L           K ++A    E+ I      KN    YY  G++     
Sbjct: 699 KH------KKALHNKGIALMMLNKNKKAIESFEKAIQI---DKNYSTAYYQKGIA----- 744

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------------RFYVTVGR------ 186
            +   D +      +    + ++  N  Y   A               Y+          
Sbjct: 745 EEKNGDMQQAFESFKNAYNLDKK-PN--YALKAGIVSNNLGNFKQSEKYLNFFNANAKKP 801

Query: 187 NQLAAKEVEIGRY------------------------Y--------LKRGEYVAAIPRFQ 214
           N++A   + I ++                        Y        LK+G Y  AI  + 
Sbjct: 802 NEIAIYNLSIAKFENNKLEESLETINKAIDLNPEKSEYLYLKASINLKKGNYQNAISLYS 861

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           LV+    +   A      L +AY       +A   +  I
Sbjct: 862 LVIEKNPENTSAY---INLAKAYEKSGNKSQAISTLEKI 897



 Score = 35.1 bits (80), Expect = 9.6,   Method: Composition-based stats.
 Identities = 11/124 (8%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
            +   ++  D +  + +   A  +    +  KA   + +  +        ++       +
Sbjct: 624 NEFLKNNPNDAQASKTL---AQAYENNGDLLKAENAYEKIIKL----TNTQEDHYKLGII 676

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           ++   KY+ +    ++ I   P+ K      +  G++   + ++        K  ++   
Sbjct: 677 RFKLKKYEHSIESFDQTIKLDPKHKK---ALHNKGIALMMLNKN--------KKAIESFE 725

Query: 164 RIVE 167
           + ++
Sbjct: 726 KAIQ 729


>gi|73536500|ref|XP_847674.1| hypothetical protein [Leishmania major strain Friedlin]
 gi|321438587|emb|CBZ12346.1| conserved hypothetical protein [Leishmania major strain Friedlin]
          Length = 693

 Score = 39.7 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 6/70 (8%)

Query: 67  FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
           ++++  + +A E       +FP +  A  + LM A+  Y  G Y +AASL E+     P 
Sbjct: 61  YIRDHQYEEAVELLATQLEEFPRSRAA--ASLM-AYCYYMMGDYGEAASLYEQLTKICPN 117

Query: 127 SKNVDY-VYY 135
            +   Y VYY
Sbjct: 118 IEE--YRVYY 125


>gi|58263492|ref|XP_569156.1| peroxisome targeting sequence binding protein [Cryptococcus
           neoformans var. neoformans JEC21]
 gi|134108322|ref|XP_777112.1| hypothetical protein CNBB3440 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50259797|gb|EAL22465.1| hypothetical protein CNBB3440 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57223806|gb|AAW41849.1| peroxisome targeting sequence binding protein, putative
           [Cryptococcus neoformans var. neoformans JEC21]
          Length = 799

 Score = 39.7 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 38/112 (33%), Gaps = 8/112 (7%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCS 84
           +   +      G +   + D +L ++        +Y +           S+A +Y++Q  
Sbjct: 641 VALGVLFNMSGGQDYSKAEDCFLAALEARPEDWLLYNRLGATLANSGRSSEAVQYYHQAL 700

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV--DYVY 134
           R  P      ++L        + G+YQ AA    + +    +       Y Y
Sbjct: 701 RLHPG---FVRALFNLGIAYMNLGEYQTAAQSILDALRL--QHSEASEAYAY 747


>gi|110636747|ref|YP_676954.1| DNAJ-like chaperone; heat shock protein [Cytophaga hutchinsonii
           ATCC 33406]
 gi|110279428|gb|ABG57614.1| DNAJ-like chaperone; heat shock protein [Cytophaga hutchinsonii
           ATCC 33406]
          Length = 211

 Score = 39.7 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 37/111 (33%), Gaps = 24/111 (21%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +  L +F  I+ C       Q   D  +            +  A  +++ + +  A+ 
Sbjct: 1   MKQLILFLFLVIS-CSTFAHNHQVQYDSLV---------ETYFASAKKYMQAKKYDSAHV 50

Query: 79  YFNQCSRDFPFAGVARKSLL--MSAFVQ----YSAGKYQQAASLGEEYITQ 123
            F    +         KS +   +A+      Y    Y+QA    E+YI  
Sbjct: 51  QFKALFKL--------KSTIPDEAAYYYGLNQYYRNNYKQALQGFEKYIKL 93


>gi|262193821|ref|YP_003265030.1| hypothetical protein Hoch_0498 [Haliangium ochraceum DSM 14365]
 gi|262077168|gb|ACY13137.1| conserved hypothetical protein [Haliangium ochraceum DSM 14365]
          Length = 368

 Score = 39.7 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 36/92 (39%), Gaps = 16/92 (17%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           + +   R  + ++E+    + + +F  A +   Q    FP    A  +LL     +   G
Sbjct: 55  NELAARRAAKPLFEEGRTLMDQGDFRAAADKLQQAQDTFP----AVGTLLNLGVCRRELG 110

Query: 109 K-------YQQAASLGEEYITQYPESKNVDYV 133
           +       +++AA L E       + + VDY 
Sbjct: 111 ETIAAWEAFREAAELAER-----TKDERVDYA 137


>gi|242053671|ref|XP_002455981.1| hypothetical protein SORBIDRAFT_03g028430 [Sorghum bicolor]
 gi|241927956|gb|EES01101.1| hypothetical protein SORBIDRAFT_03g028430 [Sorghum bicolor]
          Length = 364

 Score = 39.7 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 27/86 (31%), Gaps = 12/86 (13%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQA 113
              ++  KA     + +F  A E + Q     P      A ++           G Y +A
Sbjct: 2   AASDLESKAKEAFVDDDFELAAELYTQAIDAGPATAELYADRAQ-----AHIKLGNYTEA 56

Query: 114 ASLGEEYITQYPE-SKNVDYVYYLVG 138
            +   + I   P   K     YY  G
Sbjct: 57  VADANKAIELDPTMHK----AYYRKG 78


>gi|216264005|ref|ZP_03435999.1| tetratricopeptide repeat domain protein [Borrelia afzelii ACA-1]
 gi|215980049|gb|EEC20871.1| tetratricopeptide repeat domain protein [Borrelia afzelii ACA-1]
          Length = 1013

 Score = 39.7 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 3/62 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y KA + LK  N+  A   +N      P       + +  A     +G   QA S  E+
Sbjct: 842 LYLKASINLKNGNYQNAIPLYNLVIEKNPEN---ISAYINLAKAYEKSGNKTQAISTLEK 898

Query: 120 YI 121
            I
Sbjct: 899 II 900



 Score = 38.9 bits (90), Expect = 0.66,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 32/109 (29%), Gaps = 31/109 (28%)

Query: 69   KEQNFSKAYEYFNQ------CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
             ++N+ KA E F +          +             A          +A  L +EY  
Sbjct: 917  NQKNYQKAIEIFEKAIINSDIEAKY-----------NLATTLIEINDNTRAKDLLKEYTK 965

Query: 123  QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
              P +    Y     G+       +   DQ         +  +++++ N
Sbjct: 966  LKPNNPEALYAL---GIIEYNENNN---DQT--------LRELIKKFPN 1000


>gi|16265215|ref|NP_438007.1| TonB-dependent receptor protein [Sinorhizobium meliloti 1021]
 gi|15141355|emb|CAC49867.1| hypothetical exported protein, TonB-dependent receptor protein
           [Sinorhizobium meliloti 1021]
          Length = 1200

 Score = 39.7 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 28/93 (30%), Gaps = 3/93 (3%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
             ++ R++      D  +   +  +    ++     KA E     S   P    +  + L
Sbjct: 492 MAEAKREIDAALSVDPSFDVALVARGRYHMQNGEADKAVEDLLAGSTANP--AYS-NAQL 548

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           + A   Y  G    AA   +      P    V 
Sbjct: 549 LLAAAHYEKGDRIPAAQALDNADRLDPNDPVVA 581



 Score = 36.6 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 34/100 (34%), Gaps = 12/100 (12%)

Query: 101 AFVQYS---AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
           A   Y        + A +  E  +   P S ++   +  +G+     ++    D RA + 
Sbjct: 412 ARAHYRYHIDNDLEGALADLERALKTAPGSSSI---WNSLGL-----VQGARGDNRAAEA 463

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +    +      S +   A  Y+   R   A +E++  
Sbjct: 464 AFKQAIALDPLDPVS-HANLAIQYMDEMRMAEAKREIDAA 502


>gi|67526011|ref|XP_661067.1| hypothetical protein AN3463.2 [Aspergillus nidulans FGSC A4]
 gi|40743817|gb|EAA63003.1| hypothetical protein AN3463.2 [Aspergillus nidulans FGSC A4]
 gi|259485544|tpe|CBF82655.1| TPA: DnaJ and TPR domain protein (AFU_orthologue; AFUA_3G05400)
           [Aspergillus nidulans FGSC A4]
          Length = 519

 Score = 39.7 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 47/126 (37%), Gaps = 19/126 (15%)

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY----LKRGE 205
            D+   +  ++Y+S   E +  S  V+       + + +   K      YY    + +  
Sbjct: 360 LDEDRFEDAIRYLSTAKEHHPQSKEVQTLLQKAMILQKRSKQK-----DYYKVLGVSKDA 414

Query: 206 YVAAIPRF--QLVLANYSDAEHA-----EEAMARLV---EAYVALALMDEAREVVSLIQE 255
              AI R   QLV  ++ D   +     EEA  R+    EAY  L+  +   +  S +  
Sbjct: 415 DEKAIKRAYRQLVKQHHPDKAGSQGITKEEAEKRMAGINEAYEVLSDPELRAQYDSGVDP 474

Query: 256 RYPQGY 261
             P+  
Sbjct: 475 NDPESQ 480


>gi|85682788|gb|ABC73376.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 252 [Homo sapiens]
          Length = 887

 Score = 39.7 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 40/141 (28%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A +  ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFRWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|302340547|ref|YP_003805753.1| hypothetical protein Spirs_4077 [Spirochaeta smaragdinae DSM 11293]
 gi|301637732|gb|ADK83159.1| Tetratricopeptide TPR_2 repeat protein [Spirochaeta smaragdinae DSM
           11293]
          Length = 820

 Score = 39.7 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 3/72 (4%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
             RE+YE A   L   ++  A +Y +Q    +P        L++S  +    G++ +AA 
Sbjct: 2   TPRELYELARDALSLHDYETAKQYTDQLESLYPDN---LSVLILSGTIAMKRGRFAEAAG 58

Query: 116 LGEEYITQYPES 127
             E  ++  P++
Sbjct: 59  TFERILSFAPDN 70


>gi|225621427|ref|YP_002722686.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
 gi|225216248|gb|ACN84982.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
          Length = 453

 Score = 39.7 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 40/272 (14%), Positives = 81/272 (29%), Gaps = 77/272 (28%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
            + ++V +D + ++    +   K +       +++A +Y+++  +  P            
Sbjct: 82  DNKKEVDIDHLNNLTDYHDYNSKGIYKSANGEYAEAIKYYDEAIKLNP----------NM 131

Query: 101 AFVQY-------SAGKYQQAASLGEEYITQYPESKNVD--YVYYLVGMSYAQM------I 145
           A   Y         G  ++A    ++ I         D  Y YY  G+  + +      I
Sbjct: 132 ADAYYNKAIAKTKLGLLKEAIEEYDKAIEL-----RADYTYAYYNRGLLKSDLGLLEEAI 186

Query: 146 RDVPY----DQ----------------RATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           +D       D                   +K  ++  ++ ++   N  Y           
Sbjct: 187 KDFDKALSIDPNLFDAYNNKGLLEDELGFSKEAIKDFNKAIKLNPN--YALAYNNR-GNA 243

Query: 186 RNQLAAKEVEIGRY-------------YLKRGE-------YVAAIPRFQLVLANYSDAEH 225
           ++ L   E  I  Y             Y  RG        Y  AI  F   +    +   
Sbjct: 244 KDNLGLYEEAIKDYDKAIKLNPNYAFAYNNRGNAKDNLGLYEEAIEDFDKAIELNPNYT- 302

Query: 226 AEEAMARLVEAYVALALMDEA-REVVSLIQER 256
             +A      A   L L +EA ++    I+  
Sbjct: 303 --DAYNNRGNAKYDLGLYEEAIKDYDKAIKLN 332


>gi|149369276|ref|ZP_01889128.1| gliding motility-related protein; TPR repeat-containing protein
           [unidentified eubacterium SCB49]
 gi|149356703|gb|EDM45258.1| gliding motility-related protein; TPR repeat-containing protein
           [unidentified eubacterium SCB49]
          Length = 892

 Score = 39.7 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 49/239 (20%), Positives = 85/239 (35%), Gaps = 35/239 (14%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
              LYK    IFF++ V  L    R+    +  +          +Y   V    +   S 
Sbjct: 1   MKHLYKL---IFFALTVILLAACSRKKDSFINRNYHAVTGEFNALYNGGV-AFDKGKESL 56

Query: 76  AYEYFNQCSRDFPFAGVARKSLL----MSAFVQYSAGKYQQAASLGEE---YITQYPESK 128
           A  Y +      P   +  K  +     S    ++  + ++A  + ++   YI     + 
Sbjct: 57  AQTYNDNFWEVLPIERMETKDEIVLPGESKDPNFNRAE-EKAVKMIQKHGMYIDGKEHNP 115

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
            VD  Y L+G +     R +P         L   + I++RY  S  +  A+ +      +
Sbjct: 116 QVDEAYLLLGKTRYFDQRFIP--------ALDAFNFILDRYPTSNNINKAKVWKAKTNIR 167

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS-DAEHAEEAMARLVEAYVALALMDEA 246
           L  +EV              AI   + +L     D E   EA A + EAY+ +  + EA
Sbjct: 168 LKNEEV--------------AIKNLKKMLEAEEIDDEDLSEASASIAEAYLQMDSIPEA 212


>gi|110597764|ref|ZP_01386048.1| TPR repeat:Tetratricopeptide TPR_4 [Chlorobium ferrooxidans DSM
           13031]
 gi|110340671|gb|EAT59151.1| TPR repeat:Tetratricopeptide TPR_4 [Chlorobium ferrooxidans DSM
           13031]
          Length = 542

 Score = 39.7 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 56/193 (29%), Gaps = 59/193 (30%)

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
           +         G + +A    ++ +   P+  +   V++  G+        V  D      
Sbjct: 359 INLGIAYVQNGDFDKAVDAYQQAVRINPDDAS---VWFNTGL--------VCRDAGQAAK 407

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY---LKRGEYVAAIPRFQ 214
            +      V     +                 A   +++G  Y    +R   + A     
Sbjct: 408 AVDAFEHAVRIAPEN-----------------AQYRLKLGEAYGLIDQRARQIEAYNEAL 450

Query: 215 LVLANYSDA------------EHAEE----------------AMARLVEAYVALALMDEA 246
            +  +Y DA              AEE                A+  L + Y+     +EA
Sbjct: 451 RIKQDYDDAWVSLGVVYGIAGREAEEREAYLKALRINPGHNAALFNLGKDYLEHNNREEA 510

Query: 247 REVVSLIQERYPQ 259
           RE+ S ++   P+
Sbjct: 511 REIYSRLKRLNPE 523


>gi|109053865|ref|XP_001092797.1| PREDICTED: prolyl 3-hydroxylase 2 isoform 3 [Macaca mulatta]
          Length = 705

 Score = 39.7 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 6/68 (8%)

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           F  Y  G+Y +A    + Y+  +P+ ++V     L  + Y + + D   D  A+    + 
Sbjct: 311 FAYYRVGEYVKALECAKAYLLCHPDDEDV-----LDNVDYYESLLDDSIDP-ASIEARED 364

Query: 162 MSRIVERY 169
           ++  V+R+
Sbjct: 365 LTMFVKRH 372


>gi|268317307|ref|YP_003291026.1| Tetratricopeptide TPR_2 repeat-containing protein [Rhodothermus
           marinus DSM 4252]
 gi|262334841|gb|ACY48638.1| Tetratricopeptide TPR_2 repeat protein [Rhodothermus marinus DSM
           4252]
          Length = 906

 Score = 39.7 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 9/60 (15%), Positives = 27/60 (45%), Gaps = 5/60 (8%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL-MSAFVQYSAGKYQQAASLGEE 119
           Y +  ++ ++  + +A + + +    +P      + LL     + Y +G+Y++A    + 
Sbjct: 759 YFRGKIYQRQGEYDRALDEWMKVVARYP----RDRVLLQEIGRIHYLSGRYEEALRWFDR 814


>gi|195339555|ref|XP_002036385.1| GM17712 [Drosophila sechellia]
 gi|194130265|gb|EDW52308.1| GM17712 [Drosophila sechellia]
          Length = 439

 Score = 39.7 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 52/164 (31%), Gaps = 25/164 (15%)

Query: 35  LVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
           LV   +        D   +   + +VY EK   + K++N++ A + + +C    P     
Sbjct: 231 LVDCGKGLEEWKLSDE--ERLAEAKVYKEKGTNYFKKENWALAIKMYTKCKNILPTTVHT 288

Query: 94  ----RKSLL----MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
               +K  +      A     +  + +A       +      KN     Y  G     + 
Sbjct: 289 NEEVKKIKVATHSNIALCHQKSNDHFEAKQECNAVLDL---DKNNVKALYRRGQCNLTI- 344

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
                     +  L+   ++++    +     A   V + + +L
Sbjct: 345 -------NELEDALEDFQKVIQLEPGNK---AAANQVIICKQKL 378


>gi|218437989|ref|YP_002376318.1| hypothetical protein PCC7424_0996 [Cyanothece sp. PCC 7424]
 gi|218170717|gb|ACK69450.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424]
          Length = 499

 Score = 39.7 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 43/130 (33%), Gaps = 17/130 (13%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           Y    Y + + + + + + KA E +NQ  R  P    A        FV Y   +Y +A  
Sbjct: 386 YVNAYYNRGLTYYQLKEYDKAREDYNQALRINPQFIYAYNGR---GFVYYELKEYDKALE 442

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
              + +T   +  +    YY  G+ Y         D +      +   +++       + 
Sbjct: 443 DYHQALTINSQFTH---AYYNRGLVY--------CDLKEYDKAREDYYKVLAIDP---HY 488

Query: 176 KGARFYVTVG 185
             A   +   
Sbjct: 489 TDAYKKLKDI 498


>gi|149924351|ref|ZP_01912719.1| tetratricopeptide repeat protein [Plesiocystis pacifica SIR-1]
 gi|149814789|gb|EDM74360.1| tetratricopeptide repeat protein [Plesiocystis pacifica SIR-1]
          Length = 1270

 Score = 39.7 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 67/207 (32%), Gaps = 10/207 (4%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
            R    +Y  A    +     K    + +   D P +     + L  A   +  G+   A
Sbjct: 172 KRMDEALYYYAFELGELGEEQKMQAAYQRLINDHPNSPYIANAYLAFADYYFGKGQIGNA 231

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
             L E  +TQ+ +S    Y  Y +   +   I +           L Y    +       
Sbjct: 232 VRLYER-VTQFKDSPVYAYALYKLAWCHLNPIGEFD---ARYDKSLAYFVETINATKEGR 287

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY-SDAEHAEEAMAR 232
               A     + R+  A +++   R Y+   +   A   F+ V      D + A   M  
Sbjct: 288 AGSEANGK-QLRRD--ARRDL--VRAYVHAAKPSKAWAFFEKVGNGPGKDEQDARRMMEL 342

Query: 233 LVEAYVALALMDEAREVVSLIQERYPQ 259
           L   Y       E+  +   +Q+R+P+
Sbjct: 343 LANQYFGDGQYTESTSIYKELQKRFPE 369


>gi|30687816|ref|NP_189160.3| ROF1 (ROTAMASE FKBP 1); FK506 binding / calmodulin binding /
           peptidyl-prolyl cis-trans isomerase [Arabidopsis
           thaliana]
 gi|73919362|sp|Q38931|FKB70_ARATH RecName: Full=70 kDa peptidyl-prolyl isomerase; AltName:
           Full=Peptidyl-prolyl cis-trans isomerase; Short=PPIase;
           AltName: Full=Peptidylprolyl isomerase ROF1; AltName:
           Full=Rotamase
 gi|1373396|gb|AAB82062.1| rof1 [Arabidopsis thaliana]
 gi|332643475|gb|AEE76996.1| rotamase FKBP 1 [Arabidopsis thaliana]
          Length = 551

 Score = 39.7 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 52/151 (34%), Gaps = 26/151 (17%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQ----CSRDFPFA-GVARKSL-------LMSAFVQYSAGK 109
           E+     K   +S A + + +       D  F+    +++        L  A  +     
Sbjct: 405 EEGNSKFKGGKYSLASKRYEKAVKFIEYDTSFSEEEKKQAKALKVACNLNDAACKLKLKD 464

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y+QA  L  + +    ES NV    Y    +Y ++  D+   +   K  L       E  
Sbjct: 465 YKQAEKLCTKVLEL--ESTNVK-ALYRRAQAYMELS-DLDLAEFDVKKAL-------EID 513

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
            N+  VK  +  +     +   KE    ++Y
Sbjct: 514 PNNREVKLEQKRLKEKMKEFNKKE---AKFY 541


>gi|19113401|ref|NP_596609.1| transcriptional corepressor Ssn6 [Schizosaccharomyces pombe 972h-]
 gi|31340484|sp|O60184|CYC8_SCHPO RecName: Full=General transcriptional corepressor ssn6
 gi|3116127|emb|CAA18877.1| transcriptional corepressor Ssn6 [Schizosaccharomyces pombe]
          Length = 1102

 Score = 39.7 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 43/138 (31%), Gaps = 22/138 (15%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108
            D    +  Y     ++ +Q ++KAYE + Q        P              + Y   
Sbjct: 579 ADDTDAQSWYLIGRCYVAQQKYNKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIN 632

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +YQ A       I   P    +  V+Y +G  Y      +          L    R  E 
Sbjct: 633 QYQDALDAYSRAIRLNP---YISEVWYDLGTLYESCHNQIS-------DALDAYQRAAEL 682

Query: 169 YTNSPYVKGARFYVTVGR 186
              +P++   +  + + R
Sbjct: 683 DPTNPHI---KARLQLLR 697


>gi|67923599|ref|ZP_00517071.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
 gi|67854569|gb|EAM49856.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
          Length = 1115

 Score = 39.7 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 39/98 (39%), Gaps = 12/98 (12%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGK 109
           T     + + ++AV   +   + +A     + ++ +P  + G      LM  F      +
Sbjct: 151 TTTDEVQRLIDQAVEQYQRGEYQEAVNTVVEITQQYPNDYQGWYYLGELMGTF-----QQ 205

Query: 110 YQQAASLGEEYITQYPE-SKNVDYVYYLVGMSYAQMIR 146
           Y+QA +  ++ +   P+        +   G++  ++ R
Sbjct: 206 YEQAIASYDKALQLKPDYHP----AWVNRGVALYELGR 239



 Score = 35.9 bits (82), Expect = 6.7,   Method: Composition-based stats.
 Identities = 29/223 (13%), Positives = 71/223 (31%), Gaps = 39/223 (17%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            + V   +     +    +++  +  P   VA        +   + G++ +A +  ++ +
Sbjct: 229 NRGVALYELGRLDEEIASYDKALQLKPDDDVAWN---NRGYALGNLGRWDEAIASYDKAL 285

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              P   + D  +Y  G++   + R            +    + ++   +  Y       
Sbjct: 286 QLKP---DKDEAWYNRGIALFNLGR--------WDEAIASYDKALQLKPD--YHPAWDHR 332

Query: 182 VTVGRNQLAAKEVEIGRY---------YL----KRGEYVAAIPRFQLVLANY----SDAE 224
             +  + L   E  I  +         Y      RG  ++ + RF   +A+Y        
Sbjct: 333 GIILCDNLGRFEEAITSFEKALEIKPDYYSAWHNRGVALSNLQRFNEDIASYDKALQLKP 392

Query: 225 HAEEAMARLVEAYVALALMDEA----REVVSLIQERYPQGYWA 263
              +A          L  +DEA     + +  ++  +P+  W 
Sbjct: 393 DLHQAWYYRGNTLGNLRRLDEAIASYDKALQ-LKPDFPEA-WY 433


>gi|330509120|ref|YP_004385548.1| TPR-repeat-containing protein [Methanosaeta concilii GP-6]
 gi|328929928|gb|AEB69730.1| TPR-repeat protein [Methanosaeta concilii GP-6]
          Length = 420

 Score = 39.7 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 30/82 (36%), Gaps = 11/82 (13%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           K     +   + +A + +++     P   +    K ++      Y+ G+Y++A    +  
Sbjct: 312 KGNALFQIGRYEEAIKAYDKAIALNPKDGSAWNGKGMV-----LYNMGRYEEAIEDYDRA 366

Query: 121 ITQYPES--KNVDYVYYLVGMS 140
           I   P +     D   Y   +S
Sbjct: 367 IKFAPFNVTPLAD--LYAKNLS 386


>gi|304407851|ref|ZP_07389502.1| glycosyl transferase family 2 [Paenibacillus curdlanolyticus YK9]
 gi|304343334|gb|EFM09177.1| glycosyl transferase family 2 [Paenibacillus curdlanolyticus YK9]
          Length = 513

 Score = 39.7 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 17/117 (14%), Positives = 36/117 (30%), Gaps = 14/117 (11%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           Y           + +A E+              G A    L  +     AG+ + A +  
Sbjct: 214 YAAGTELFGAGRWLEAIEWLAPLAEGEGLGETCGFASDVRLKLSHAYRLAGQLEAAIAHA 273

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
           E  + +YP+  ++         +Y         D   +   L+ + + +     +PY
Sbjct: 274 EAGVREYPDFPDMCEAL---AAAYMA------RDDAPS--ALRALEQAIAIGPAAPY 319


>gi|296127458|ref|YP_003634710.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
 gi|296019274|gb|ADG72511.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
          Length = 687

 Score = 39.7 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 79/234 (33%), Gaps = 41/234 (17%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
               Y         +N+++A EYFN+       F     +R         +Y    Y+ A
Sbjct: 64  ANTYYNIGASKHNLKNYNEAIEYFNKTLELDSSFFDVYYSR------GVAEYHLKFYENA 117

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
            S   + +   P  +N    YY+  + YA++ +         K  ++    ++  +    
Sbjct: 118 VSDFTKALEVNPNLQN---AYYIRALCYAKINKH--------KKAIEDFDTLLNSFDEIN 166

Query: 174 YVKGARFYVTVGRNQL---AAKEVEIGRYYLKRGEYV--------AAIPRFQLVLANYSD 222
           Y+      ++     L   A K+ +I  YYL    Y+        + +  F   + +Y  
Sbjct: 167 YIYYYYRGLSKFHLNLFEEAVKDFDIAAYYLPNEGYIYYDRALSYSKLNMFDKSIRDY-- 224

Query: 223 AEHAE------EAMARLVEAYVALALMDEA-REVVSLIQERYPQGYWARYVETL 269
            +  E      +A      +Y  +    +A  +   +I+   P    A Y   L
Sbjct: 225 TKAIEINKNEIDAYYNRASSYCEIEEYYKAIEDYNKVIELN-PDDDEAYYNRAL 277


>gi|300776635|ref|ZP_07086493.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
 gi|300502145|gb|EFK33285.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
          Length = 368

 Score = 39.7 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 36/84 (42%), Gaps = 6/84 (7%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           R+       D  Y    YE A+ +++++++  A     +    +P       +LL +A+ 
Sbjct: 61  RECEKKDPQDYTYP---YEIALAYIRKEDYKSAISLLEKIKD-YPNIDDYYFALLGNAYD 116

Query: 104 QYSAGKYQQAASLGEEYITQYPES 127
              A   +QA    +E + +YP S
Sbjct: 117 Y--ADNPEQAIKTYDEGLKKYPSS 138


>gi|223939519|ref|ZP_03631395.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514]
 gi|223891791|gb|EEF58276.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514]
          Length = 254

 Score = 39.7 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 21/150 (14%), Positives = 57/150 (38%), Gaps = 22/150 (14%)

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
           + + + + P      ++LL++    + AGK+++A +  + ++ ++ +S         +G+
Sbjct: 79  YLKVANEHPGTSAGGQALLLAGGALFEAGKFKEAQAQFDRFLGEHGDSALASQA--RIGV 136

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           + +         Q            ++    N   +  A+                + R 
Sbjct: 137 AASLEA------QGEDAQAAAKYQALISSQPNDSVIPQAKS--------------ALARL 176

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
           Y K+G+Y  A+  +Q +    ++   + EA
Sbjct: 177 YEKQGKYADALRLYQELTKQGNNDSWSAEA 206


>gi|146293561|ref|YP_001183985.1| TPR repeat-containing protein [Shewanella putrefaciens CN-32]
 gi|145565251|gb|ABP76186.1| TPR repeat-containing protein [Shewanella putrefaciens CN-32]
          Length = 663

 Score = 39.7 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 37/130 (28%), Gaps = 33/130 (25%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++A+   + Q++S A + F                       QY AG Y+QA    E+  
Sbjct: 359 QQAMQAYQSQDYSNAAKQFESPQWR--------------GSAQYKAGDYEQALKTFEQ-- 402

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                  +     Y  G +  Q+ +         K   Q        +        A+  
Sbjct: 403 ------DSSAQGLYNQGNALMQLGK-----PDKAKERYQAALEQQPNFP------DAKAN 445

Query: 182 VTVGRNQLAA 191
           + +    L  
Sbjct: 446 LALAEKLLEE 455


>gi|109464191|ref|XP_226606.4| PREDICTED: tetratricopeptide repeat domain 37 [Rattus norvegicus]
          Length = 1471

 Score = 39.7 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 46/133 (34%), Gaps = 10/133 (7%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVR-YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
           A+  L            LD ++D       +  + +  L      KA +        +P 
Sbjct: 359 ALLKLSDCASLEEAVHILDQLSDTDNTPGLLVLQGLACLNTGAIDKATKIMEDLVASYP- 417

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
             ++    L  A+V ++   Y QA +  +  +    +   V   +Y +G++Y  M  +  
Sbjct: 418 -DLSEAHALE-AYVHFTKKDYVQAETSFQRALE---KDAEVAEYHYQLGLTYWLMGEETR 472

Query: 150 YDQRATKLMLQYM 162
            D+      L + 
Sbjct: 473 KDRT---KALNHF 482


>gi|78778008|ref|YP_394323.1| TPR repeat-containing protein [Sulfurimonas denitrificans DSM 1251]
 gi|78498548|gb|ABB45088.1| TPR repeat [Sulfurimonas denitrificans DSM 1251]
          Length = 788

 Score = 39.7 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 46/128 (35%), Gaps = 8/128 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y K     +++N+  A +  N   +++P +    + L              +   + ++Y
Sbjct: 181 YIKIKKLYEDKNYEFALDLCNDVIKEYPTSLFRAELLFYKIRSHAKLNDNDKLVEVAKDY 240

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +  Y   +NV  V  L+  +Y ++  +             +  R+   + +S Y K    
Sbjct: 241 LRDYSSDENVAEVLSLIARAYNKIGLNSD--------AEYFYDRLFSEHYDSIYAKWGYI 292

Query: 181 YVTVGRNQ 188
           Y+     +
Sbjct: 293 YMAEVLEK 300



 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 43/117 (36%), Gaps = 18/117 (15%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE--VEIGRYYLKRGEYVAAI 210
           +  +  L   + +++ Y  S +     FY      +L   +  VE+ + YL+        
Sbjct: 191 KNYEFALDLCNDVIKEYPTSLFRAELLFYKIRSHAKLNDNDKLVEVAKDYLR-------- 242

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
                   +YS  E+  E ++ +  AY  + L  +A      +   +    +A++  
Sbjct: 243 --------DYSSDENVAEVLSLIARAYNKIGLNSDAEYFYDRLFSEHYDSIYAKWGY 291


>gi|118395589|ref|XP_001030142.1| Ser/Thr protein phosphatase family protein [Tetrahymena
           thermophila]
 gi|89284434|gb|EAR82479.1| Ser/Thr protein phosphatase family protein [Tetrahymena thermophila
           SB210]
          Length = 479

 Score = 39.7 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 42/147 (28%), Gaps = 18/147 (12%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D +   E  +K     K   + +A +++ +       +  A       AF Q     
Sbjct: 2   DTEDFQQAEEFKQKGNDCFKHSKYQEASDFYTKAIDCHSTSPKAAPYYSNRAFCQLKLEN 61

Query: 110 YQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           Y  A    +  I   P      +V  YY  G +Y  + +         +   +   ++  
Sbjct: 62  YGLALEDSKTSIKLDPN-----FVKGYYREGSAYLALGK-----LEDARNSFKAAHKLQ- 110

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEV 194
                P        +   +  +  KE 
Sbjct: 111 -----PKDTDINEKLKKLKQMIYEKEF 132


>gi|261286858|gb|ACX68652.1| Sgt1 [Saccharum hybrid cultivar]
          Length = 362

 Score = 39.7 bits (92), Expect = 0.47,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 27/86 (31%), Gaps = 12/86 (13%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQA 113
              ++  KA     + +F  A E + Q     P      A ++           G Y +A
Sbjct: 3   AASDLESKAKEAFVDDDFELAAELYTQAIDAGPATADLYADRAQ-----AHIKLGNYTEA 57

Query: 114 ASLGEEYITQYPE-SKNVDYVYYLVG 138
            +   + I   P   K     YY  G
Sbjct: 58  VADANKAIELDPTMHK----AYYRKG 79


>gi|157374762|ref|YP_001473362.1| TPR repeat-containing protein [Shewanella sediminis HAW-EB3]
 gi|157317136|gb|ABV36234.1| tetratricopeptide TPR_2 repeat protein [Shewanella sediminis
           HAW-EB3]
          Length = 644

 Score = 39.7 bits (92), Expect = 0.47,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 49/156 (31%), Gaps = 35/156 (22%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
           VC  +             S  DV   +   ++ +   + Q +  A E F+          
Sbjct: 323 VCAALVCIIYQPTPALASSWDDVWQTKN--QQGMEAYQAQEYQGASEKFSD--------- 371

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
              +     A   Y AG Y +A +L E       + ++     Y  G +  Q        
Sbjct: 372 --PQWQ---ASAHYKAGDYDEALALFE-------QDESAA-GLYNQGNALMQ-------- 410

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           Q      ++   R V++      +K A+  + + + 
Sbjct: 411 QGKYDEAIKRYERAVKKNPE---LKDAQENLELAKK 443


>gi|13324602|gb|AAK18804.1|AF305612_1 LMP1 [Borrelia burgdorferi]
          Length = 1013

 Score = 39.7 bits (92), Expect = 0.47,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 3/62 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y KA + LK  N+  A   +N      P       + +  A     +G   QA S  E+
Sbjct: 842 LYLKASINLKNGNYQNAIPLYNLVIEKNPEN---ISAYINLAKAYEKSGNKTQAISTLEK 898

Query: 120 YI 121
            I
Sbjct: 899 II 900



 Score = 38.9 bits (90), Expect = 0.79,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 32/109 (29%), Gaps = 31/109 (28%)

Query: 69   KEQNFSKAYEYFNQ------CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
             ++N+ KA E F +          +             A          +A  L +EY  
Sbjct: 917  NQKNYQKAIEIFEKAIINSDIEAKY-----------NLATTLIEINDNTRAKDLLKEYTK 965

Query: 123  QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
              P +    Y     G+       +   DQ         +  +++++ N
Sbjct: 966  LKPNNPEALYAL---GIIEYNENNN---DQT--------LRELIKKFPN 1000


>gi|322823311|gb|EFZ29090.1| hypothetical protein TCSYLVIO_4663 [Trypanosoma cruzi]
          Length = 414

 Score = 39.7 bits (92), Expect = 0.47,   Method: Composition-based stats.
 Identities = 17/146 (11%), Positives = 42/146 (28%), Gaps = 23/146 (15%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ-CS---RDFPFAGVARK 95
           +   +    ++        E+  K    +    + +A  Y+ +       +  F   A +
Sbjct: 122 KAKQKFEMRNNPYQGMSAEEIKNKGNELMGMAKYKEAIAYYTKSIEMEPENHVF--FANR 179

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +             Y  A    E  I   P         Y     Y+++   + Y ++  
Sbjct: 180 AA-----AHTHLKDYDSAVIDCERAIAINPN--------YSKA--YSRLGTSLFYQEKYA 224

Query: 156 KLMLQYMSRIVERYT-NSPYVKGARF 180
           +  +   ++  E    N  Y +  + 
Sbjct: 225 R-AVDAFAKASELDPTNDRYKEDLKQ 249


>gi|307301551|ref|ZP_07581311.1| FecR protein [Sinorhizobium meliloti BL225C]
 gi|306903608|gb|EFN34196.1| FecR protein [Sinorhizobium meliloti BL225C]
          Length = 1202

 Score = 39.7 bits (92), Expect = 0.47,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 28/93 (30%), Gaps = 3/93 (3%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
             ++ R++      D  +   +  +    ++     KA E     S   P    +  + L
Sbjct: 492 MAEAKREIDTALSVDPSFDVALVARGRYHMQNGEADKAVEDLLAGSTANP--AYS-NAQL 548

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           + A   Y  G    AA   +      P    V 
Sbjct: 549 LLAAAHYEKGDRIPAAQALDNADRLDPNDPVVA 581



 Score = 36.2 bits (83), Expect = 4.4,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 34/100 (34%), Gaps = 12/100 (12%)

Query: 101 AFVQYS---AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
           A   Y        + A +  E  +   P S ++   +  +G+     ++    D RA + 
Sbjct: 412 ARAHYRYHIDNDLEGALADLERALKTAPGSSSI---WNSLGL-----VQGARGDNRAAEA 463

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
             +    +      S +   A  Y+   R   A +E++  
Sbjct: 464 AFKQAIALDPLDPVS-HANLAIQYMDEMRMAEAKREIDTA 502


>gi|224369656|ref|YP_002603820.1| TPR repeat family protein [Desulfobacterium autotrophicum HRM2]
 gi|223692373|gb|ACN15656.1| TPR repeat family protein [Desulfobacterium autotrophicum HRM2]
          Length = 263

 Score = 39.7 bits (92), Expect = 0.47,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 42/142 (29%), Gaps = 20/142 (14%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
             +  +E++ + V  LK      A + F +     P      K            GK   
Sbjct: 34  QAKSPQELFNEGVEELKTGEPQAAVDLFTELIMTEPGNA---KVHKNRGVALMKLGKVDL 90

Query: 113 AASLGEEYITQYPESKNVDYVYY--LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           A    E  +T  P+        Y  L    Y +          A +  +      +ER  
Sbjct: 91  AIQDFERALTLNPDLPG----LYSNLGAAWYYKQ---------AYEKAVINYGYEIEREP 137

Query: 171 NS--PYVKGARFYVTVGRNQLA 190
            S   Y   A   V + + +LA
Sbjct: 138 ESYVSYFNRALCRVLLNQPKLA 159


>gi|167836683|ref|ZP_02463566.1| hypothetical protein Bpse38_09366 [Burkholderia thailandensis
           MSMB43]
          Length = 303

 Score = 39.7 bits (92), Expect = 0.47,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 31/95 (32%), Gaps = 4/95 (4%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
            L +   I V  +VG    S     + + T  +   ++   A   L   + + A   F++
Sbjct: 10  VLALVLPILVGPMVGCTTGSFHTRSIAAQTGPQPAADL-RVAESALSAGDATLAATLFDK 68

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
                P +     + L      Y  G   +A  L 
Sbjct: 69  VLAADPNS---LPAQLGLGDAMYQNGDLARAGVLY 100


>gi|114591090|ref|XP_001160532.1| PREDICTED: leprecan-like 1 isoform 1 [Pan troglodytes]
          Length = 572

 Score = 39.7 bits (92), Expect = 0.47,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 6/68 (8%)

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           F  Y  G+Y +A    + Y+  +P+ ++V     L  + Y + + D   D  A+    + 
Sbjct: 315 FAYYRVGEYVKALECAKAYLLCHPDDEDV-----LDNVDYYESLLDDSTDP-ASIEARED 368

Query: 162 MSRIVERY 169
           ++  V+R+
Sbjct: 369 LTMFVKRH 376


>gi|324502334|gb|ADY41027.1| RNA polymerase-associated protein CTR9 [Ascaris suum]
          Length = 1143

 Score = 39.7 bits (92), Expect = 0.47,   Method: Composition-based stats.
 Identities = 22/143 (15%), Positives = 52/143 (36%), Gaps = 20/143 (13%)

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKG------ARFY-VTVGRNQLAA-KE---- 193
           R    D+   +  L   S+ ++ +  + +         A+   +   R+  A  +E    
Sbjct: 632 RKREKDKDYRERALMMYSKALKVHPKNIWAANGIGCILAQKGAIQEARDIFAQVREATAD 691

Query: 194 -----VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA-RLVEAYVALALMDEAR 247
                V I   Y+++ +YV+AI  +   +  +    + + A+   +  AY     +D+ R
Sbjct: 692 FWDVWVNIAHIYMEQKQYVSAIQMYDNCMKKFR--RYNDVALMQYMARAYYKAGKLDDCR 749

Query: 248 EVVSLIQERYPQGYWARYVETLV 270
            ++       P     ++    V
Sbjct: 750 HMLEKAMCEAPDNLMVKFNYAFV 772


>gi|284036695|ref|YP_003386625.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
 gi|283815988|gb|ADB37826.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
          Length = 658

 Score = 39.7 bits (92), Expect = 0.47,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 51/155 (32%), Gaps = 28/155 (18%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYS 106
              +      +E+Y +A+    E+   +A  +  Q  +  P F      + +    +   
Sbjct: 41  PPLLAQSAKAKELYAQAIKLFGERKAREAIPFMEQAIKQDPDFTD----AYIKLGQLYEF 96

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
             +Y+ A S     I   P+S          G +Y  +   +    R +   L ++ +  
Sbjct: 97  TRQYEPALSAYRNVIKLQPDSPAS-------GAAYQSLSNTLLRLGRYS-EALPFLEKYQ 148

Query: 167 ERY-TNSPYVKGAR-FYVTVGRNQLAAKEVEIGRY 199
             +   S     A+   +T         ++E  R+
Sbjct: 149 TLFAPQS-----AQGKRIT--------HQLETARF 170


>gi|268318274|ref|YP_003291993.1| hypothetical protein Rmar_2735 [Rhodothermus marinus DSM 4252]
 gi|262335808|gb|ACY49605.1| hypothetical protein Rmar_2735 [Rhodothermus marinus DSM 4252]
          Length = 194

 Score = 39.7 bits (92), Expect = 0.47,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 28/69 (40%), Gaps = 6/69 (8%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           G+Y +A +L EE +  +P+      V     M+              ++   + M  ++ 
Sbjct: 121 GRYTEAIALLEEALGLFPKHPMAAQVMLWWAMARYLKSGG------DSRQFREDMLELLR 174

Query: 168 RYTNSPYVK 176
           RY +SP  +
Sbjct: 175 RYPDSPEAR 183



 Score = 36.2 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 2/70 (2%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA--GKYQQAASLGEEY 120
           +A   +    +++A     +    FP   +A + +L  A  +Y    G  +Q      E 
Sbjct: 113 RAKELVPRGRYTEAIALLEEALGLFPKHPMAAQVMLWWAMARYLKSGGDSRQFREDMLEL 172

Query: 121 ITQYPESKNV 130
           + +YP+S   
Sbjct: 173 LRRYPDSPEA 182


>gi|209809313|ref|YP_002264851.1| hypothetical protein VSAL_II0523 [Aliivibrio salmonicida LFI1238]
 gi|208010875|emb|CAQ81277.1| putative membrane protein [Aliivibrio salmonicida LFI1238]
          Length = 619

 Score = 39.7 bits (92), Expect = 0.47,   Method: Composition-based stats.
 Identities = 10/68 (14%), Positives = 22/68 (32%), Gaps = 8/68 (11%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           K     K  ++  A E  +             +S    A     +G+ ++A    E  + 
Sbjct: 372 KGAAQYKAGDYKGAIESLSGLKD--------PQSQYNLANALAQSGQLEEAKEKYESLLN 423

Query: 123 QYPESKNV 130
             P+ ++ 
Sbjct: 424 NNPDMEDA 431


>gi|170077497|ref|YP_001734135.1| hypothetical protein SYNPCC7002_A0875 [Synechococcus sp. PCC 7002]
 gi|169885166|gb|ACA98879.1| conserved hypothetical protein [Synechococcus sp. PCC 7002]
          Length = 167

 Score = 39.7 bits (92), Expect = 0.47,   Method: Composition-based stats.
 Identities = 9/72 (12%), Positives = 30/72 (41%), Gaps = 2/72 (2%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
              + ++E       +  + ++ +YF +  +   P++  + +  L       +  + ++A
Sbjct: 4   TTTQILFETGKDAFLQGEYRQSIDYFQRTVANLPPYSRESGEVQLWLVSAYQANNQGEKA 63

Query: 114 ASLGEEYITQYP 125
            +L  E +  +P
Sbjct: 64  IALCRE-LMTHP 74


>gi|118379176|ref|XP_001022755.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89304522|gb|EAS02510.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 1724

 Score = 39.7 bits (92), Expect = 0.47,   Method: Composition-based stats.
 Identities = 27/207 (13%), Positives = 65/207 (31%), Gaps = 40/207 (19%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR---DFPFAGVARKSLLM 99
            ++        V   +E+ ++A      + + K  E   + S    +FP      K   M
Sbjct: 480 EKEERKAKEARVIDCKELIKEAKQLFTNKEYQKCIEVLQKISSVSDNFP------KVNEM 533

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
             +     G+ ++A+    + +   P  + +    + +G     + +            +
Sbjct: 534 LGYSYEQIGENEKASQHYMKALQLNPNDQTL---LFNLGNCLFNLEK--------YDEAI 582

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
           +  + ++    N PY   A   +                 Y ++ +Y  +I  +Q  L  
Sbjct: 583 EKYNILIHLNQNKPY---AYENLAAC--------------YYEKKQYQESIQFYQKALEY 625

Query: 220 YSDAEHAEEAMARLVEAYVALALMDEA 246
                        L +A+ +    +EA
Sbjct: 626 NKVDPLTN---YGLGKAFYSNNQYEEA 649



 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 63/157 (40%), Gaps = 18/157 (11%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
           + +    V  ++ + EKA     + ++  A  YFNQ  ++        +++   A   + 
Sbjct: 40  HNNPEDQVDLEQNILEKAQQLFNQNDYKTAQIYFNQIVQED---SKNVQAIQNLALCNFY 96

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
              Y +   L ++ I   P+   +D +YY +G +Y         DQ+     L Y+ + +
Sbjct: 97  LKNYDEGILLMQKAIEMQPD--YIDKLYYYLGCAY--------CDQKHYMQGLVYLEKAM 146

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
                +   + A F +      ++   ++I + Y K+
Sbjct: 147 T---QNQNNQDAIFMLGNTYQNISC--LQIAQNYYKK 178


>gi|15668437|ref|NP_247235.1| hypothetical protein MJ_0263 [Methanocaldococcus jannaschii DSM
           2661]
 gi|3915922|sp|O06917|Y263_METJA RecName: Full=TPR repeat-containing protein MJ0263
 gi|1499043|gb|AAB98249.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
           2661]
          Length = 320

 Score = 39.7 bits (92), Expect = 0.47,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 80/236 (33%), Gaps = 38/236 (16%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
            L++   I + F+ G   ++ + +   S          + KA+++++   F KA E  ++
Sbjct: 80  LLSLGNLICLTFVKGEYERTLKYIEKLSRLSKPCYLSPFHKALIYIEFGEFEKALEALDE 139

Query: 83  CSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
             + +P   + + +K+ ++        GK  +A     + ++     K+  + +YL G  
Sbjct: 140 FLKIYPNLTSILRQKASILEI-----LGKLDEALDCVNKILSI---KKDDAHAWYLKGRI 191

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
             ++           K  L  +   +               +      +A  E+      
Sbjct: 192 LKKL--------GNIKEALDALKMAINL----------NENLVHVYKDIAYLELA----- 228

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
                Y  A+      L  + +     EA   L   Y  L  +D+A ++   I   
Sbjct: 229 --NNNYEEALNYITKYLEKFPN---DVEAKFYLALIYENLNKVDDALKIYDKIISN 279


>gi|148264976|ref|YP_001231682.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4]
 gi|146398476|gb|ABQ27109.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4]
          Length = 248

 Score = 39.7 bits (92), Expect = 0.47,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 47/157 (29%), Gaps = 42/157 (26%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQC-SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
              V +L+ + +  A +         F     A  + +      +  G YQQA S+    
Sbjct: 102 NLGVNYLEMKRWDDAIQQLKIVTEDIFYQNQDA--ATINLGLAYFGKGDYQQALSVFRSA 159

Query: 121 ITQYPESKNV-----------------------------DYV--YYLVGMSYAQMIRDVP 149
           +  YP    +                             DY   YY +G++Y ++  +  
Sbjct: 160 LVSYPRDPRLRMSLGRVYFALDKIEMAIGEYKRAAEIQKDYANAYYYLGLAYLKIKDNS- 218

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
                    +     +V    +S     +R Y+ + +
Sbjct: 219 -------AAVTAFKDVVRIAPDSEIGLLSREYLDMLK 248


>gi|282890887|ref|ZP_06299404.1| conserved hypothetical protein [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499241|gb|EFB41543.1| conserved hypothetical protein [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 328

 Score = 39.7 bits (92), Expect = 0.48,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 46/129 (35%), Gaps = 28/129 (21%)

Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           L+G ++A+ I             +    R +    +S +       + +        E E
Sbjct: 74  LIGQTFAREID--------LYRAITSFKRALILLPDSKF----ERRLQI--------EYE 113

Query: 196 IGRYYLKRGEYVAAIPRFQ-----LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
           I   Y    +YV AI  F+      V A +       E +  L E Y  L   ++A  ++
Sbjct: 114 IVLCYYFGQKYVEAIEAFEDSRLFQVTAEFP---AFNELVLVLYECYEKLGQPEKACAIL 170

Query: 251 SLIQERYPQ 259
             +Q+  PQ
Sbjct: 171 ETLQQCNPQ 179


>gi|238592086|ref|XP_002392802.1| hypothetical protein MPER_07575 [Moniliophthora perniciosa FA553]
 gi|215459356|gb|EEB93732.1| hypothetical protein MPER_07575 [Moniliophthora perniciosa FA553]
          Length = 359

 Score = 39.7 bits (92), Expect = 0.48,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 40/115 (34%), Gaps = 22/115 (19%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
               Y +  +      F  A E + +       F F+       +  A  QY + +   A
Sbjct: 225 PDIYYHRGQVLFIMNQFKDAAENYTKSTELDDQFVFSH------IQLAVAQYKSDQLASA 278

Query: 114 ASLGEEYITQYPE-SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +     +  +P+ S+ ++Y        Y +++     DQ+     ++   R +E
Sbjct: 279 MAQFRRTMKAFPQRSEPLNY--------YGELL----LDQQRFPDAIEKFDRAIE 321


>gi|182416089|ref|YP_001821155.1| TPR repeat-containing protein [Opitutus terrae PB90-1]
 gi|177843303|gb|ACB77555.1| Tetratricopeptide TPR_2 repeat protein [Opitutus terrae PB90-1]
          Length = 715

 Score = 39.7 bits (92), Expect = 0.48,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 55/194 (28%), Gaps = 41/194 (21%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
                 L     ++A  +F +       +  A                  + ++A    E
Sbjct: 552 NLGTALLTLDRAAEAIAHFERAVQLDPRYTMAHY------NLGLALAQTDRVREAIPHFE 605

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
             +T  P   + +       +S A  +             +++  R +E   +S      
Sbjct: 606 RVVTLQPTHAHAE-------LSLAYALASTDR----FSESIRHFERALELEPDSVEAHQT 654

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE----AMARLV 234
              +      LA             G+   A+P F+ V+     +  A      A+ +L 
Sbjct: 655 YARM------LARH-----------GQLDQALPHFRAVVELMPQSGAAHRDLGFALRQLG 697

Query: 235 EAYVALALMDEARE 248
            +  A+    EA+ 
Sbjct: 698 RSDEAMPHFLEAQR 711



 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 41/121 (33%), Gaps = 16/121 (13%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D RY    Y   +   +     +A  +F +     P    A    L  A+   S  ++ +
Sbjct: 577 DPRYTMAHYNLGLALAQTDRVREAIPHFERVVTLQPTHAHAE---LSLAYALASTDRFSE 633

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMI-RDVPYDQRATKLMLQYMSRIVERYTN 171
           +    E  +   P+S            +YA+M+ R    DQ      L +   +VE    
Sbjct: 634 SIRHFERALELEPDSVEAHQ-------TYARMLARHGQLDQ-----ALPHFRAVVELMPQ 681

Query: 172 S 172
           S
Sbjct: 682 S 682


>gi|218246665|ref|YP_002372036.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801]
 gi|257059707|ref|YP_003137595.1| hypothetical protein Cyan8802_1863 [Cyanothece sp. PCC 8802]
 gi|218167143|gb|ACK65880.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801]
 gi|256589873|gb|ACV00760.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8802]
          Length = 344

 Score = 39.7 bits (92), Expect = 0.48,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 74/229 (32%), Gaps = 25/229 (10%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           S+    +  VT    +  +   A+  ++E  + +A   F +     P     +++ L   
Sbjct: 2   SNFTPKIKRVTKPTDKSGLARMALQLVQENRYDEALLAFQEILEQDPN---TKQAHLGIG 58

Query: 102 FVQYSAGKYQQAASLGEEYITQYP----ESKNVDYVYY---LVGMSYAQMIRDVPYDQRA 154
            +      YQ A +  +      P     S  +   YY    + +S       V  D   
Sbjct: 59  RIYLKQKDYQGALTHFQTARNLDPMMVQASLAIGNAYYELKQLELSMQAFQDAVNIDPSD 118

Query: 155 TKLMLQYMSRIV--ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
               L     ++  ++Y      K       V   QL    + + + Y ++G+   AI  
Sbjct: 119 ATGYLGIGRVLIKQKQYPQ---AKEQLQKALVLNPQLILARLLMAQIYQEQGDIDQAITE 175

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + VL               L  AY  L  +   +E  +L ++ + Q  
Sbjct: 176 IESVLKLNPT----------LSNAYQGLGNLYLKQEKYALARKNFEQAQ 214


>gi|187918083|ref|YP_001883646.1| surface-located membrane protein 1 [Borrelia hermsii DAH]
 gi|119860931|gb|AAX16726.1| surface-located membrane protein 1 [Borrelia hermsii DAH]
          Length = 784

 Score = 39.7 bits (92), Expect = 0.48,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 82/262 (31%), Gaps = 60/262 (22%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
           + + + ++Y   V+      + Y+  ++  K + + +A + F +     P     +K+  
Sbjct: 422 DFKKAEEIYEKIVSITNNAEDHYKVGIIKFKLKKYEEAIKAFGKTISLNPKH---KKAYT 478

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS------------YAQMIR 146
                   + K +QA    ++ IT     KN D  YY  G++              +   
Sbjct: 479 NKGTSLILSNKPKQAIEAFKKAITI---DKNYDNAYYKKGIAEEQNDDKQNAFLSFKKAY 535

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSP-YVKGARFYVTVGRNQLAAKEVEIGRY------ 199
            +  +           +  +  + NS  Y+  AR  +    + +    + I ++      
Sbjct: 536 GITKNPHYALKAGIIANH-IGDFKNSEKYLDKARASIKEKNDIML-YNLAIAKFENNNLN 593

Query: 200 --------------------------YLKRGEYVAAIPRFQLVLANYSD--AEHAEEAMA 231
                                     YL +  Y  AIP +  V+    D    H      
Sbjct: 594 ESLKTINQALVINPKKPEYLYLKASIYLTKENYNEAIPLYNAVILKNPDNITAHIN---- 649

Query: 232 RLVEAYVALALMDEAREVVSLI 253
            L  AY       +A E++  I
Sbjct: 650 -LARAYEKSGNELKAIEILEKI 670



 Score = 36.2 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 35/103 (33%), Gaps = 19/103 (18%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
            ++N+ KA + F +          + ++    A    +    ++A    +EYI   P + 
Sbjct: 688 NQKNYQKAIKIFQKAEALS-----SLEAKYNLATTFLALKDNKRAMEKLKEYIKINPNNP 742

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
                 + +G        D   D        + +  ++ ++ N
Sbjct: 743 E---ALHALGTIEYN---DNGSD--------KILKEVINKFPN 771


>gi|149743443|ref|XP_001488681.1| PREDICTED: similar to UPF0530 protein [Equus caballus]
          Length = 469

 Score = 39.7 bits (92), Expect = 0.48,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 46/147 (31%), Gaps = 29/147 (19%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQ----------REVYEKAVLFLKEQNFSKAYEYFN 81
              LVG       D  LD       +           +++  AV    + NF KA E + 
Sbjct: 73  GLLLVGTGSSVRLDKELDLAVKTMVEIAKTQPLTQREQLHVSAVETFAKGNFPKASELWE 132

Query: 82  QCSRDFPFAGVARKSLLMSA-----FVQYSAGKYQQAASLGEEYITQYPE-SKNVDYVYY 135
           Q  RD P          M A        +  G  +Q           YP  + N+    Y
Sbjct: 133 QILRDHPTD--------MLALKFSHDTYFYLGHQEQMRDSVAR---VYPFWTPNIPLSSY 181

Query: 136 LVGMSYAQMIRDVPYDQ--RATKLMLQ 160
           + G+    ++    YDQ  +  K  L 
Sbjct: 182 VKGIYSFGLMETNFYDQAEKLAKEALS 208


>gi|119510182|ref|ZP_01629320.1| hypothetical protein N9414_10368 [Nodularia spumigena CCY9414]
 gi|119465132|gb|EAW46031.1| hypothetical protein N9414_10368 [Nodularia spumigena CCY9414]
          Length = 304

 Score = 39.7 bits (92), Expect = 0.48,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 49/151 (32%), Gaps = 15/151 (9%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            F ++    L G   Q + D    ++  D +     Y   ++  ++Q++ +A   F +  
Sbjct: 113 AFANLGGALLEGSNLQQASDYLERAIELDPKLGFAHYNLGLVRQQQQDWERAIASFKKAM 172

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
               ++  A +            GK  QA     + I   P+       +Y +GM +   
Sbjct: 173 E---YSKNAPEPPYHLGTSYLQQGKVNQARDAFFQAIKNNPQYPE---AHYNLGMIWFN- 225

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
                  Q   K  L    +  E   N P  
Sbjct: 226 -------QGQLKEALAAFRKSAEANPNYPNA 249


>gi|84388532|ref|ZP_00991079.1| hypothetical protein V12B01_07046 [Vibrio splendidus 12B01]
 gi|84377081|gb|EAP93952.1| hypothetical protein V12B01_07046 [Vibrio splendidus 12B01]
          Length = 262

 Score = 39.7 bits (92), Expect = 0.48,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 47/127 (37%), Gaps = 15/127 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            Q   D+   QR     +    +  + + +S +   + +++              G+ Y 
Sbjct: 149 YQNAVDMILKQRDYTGAIAAFQKFQKDFPDSTFTPNSHYWL--------------GQLYF 194

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + +   A+  F  V+ +Y D+    +A+ +L +         +A++    +   YP   
Sbjct: 195 AKKQDKEAVKSFAAVV-SYKDSNKRADALVKLGDIAARNNNAAQAKKYYQQVVTEYPNSA 253

Query: 262 WARYVET 268
            A+  +T
Sbjct: 254 SAKVAKT 260



 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 55/150 (36%), Gaps = 23/150 (15%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
            + S+D      TDV  ++  Y+ AV   LK+++++ A   F +  +DFP +     S  
Sbjct: 129 SEGSKDASGTFSTDVD-EQTAYQNAVDMILKQRDYTGAIAAFQKFQKDFPDSTFTPNSHY 187

Query: 99  MSAFVQY-SAGKYQ-----QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
               + +      +      A    ++       +K  D       +     + D+    
Sbjct: 188 WLGQLYFAKKQDKEAVKSFAAVVSYKD------SNKRAD------ALV---KLGDIAARN 232

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYV 182
                  +Y  ++V  Y NS   K A+ ++
Sbjct: 233 NNAAQAKKYYQQVVTEYPNSASAKVAKTHL 262


>gi|118579010|ref|YP_900260.1| ErfK/YbiS/YcfS/YnhG family protein [Pelobacter propionicus DSM
           2379]
 gi|118501720|gb|ABK98202.1| ErfK/YbiS/YcfS/YnhG family protein [Pelobacter propionicus DSM
           2379]
          Length = 334

 Score = 39.7 bits (92), Expect = 0.48,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 25/97 (25%), Gaps = 43/97 (44%)

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           I  +P + N DY                       +  L    R++  Y  S Y + +  
Sbjct: 100 IHSHPRNGNKDY-----------------------QKALDCFQRLIREYPASEYRRDSER 136

Query: 181 --------------------YVTVGRNQLAAKEVEIG 197
                                +   R + A KE EI 
Sbjct: 137 MIFSIANVAIKDGTIADQQTRIDALRKEAADKESEIA 173


>gi|325286055|ref|YP_004261845.1| hypothetical protein Celly_1146 [Cellulophaga lytica DSM 7489]
 gi|324321509|gb|ADY28974.1| Tetratricopeptide TPR_1 repeat-containing protein [Cellulophaga
           lytica DSM 7489]
          Length = 250

 Score = 39.7 bits (92), Expect = 0.48,   Method: Composition-based stats.
 Identities = 10/85 (11%), Positives = 23/85 (27%), Gaps = 9/85 (10%)

Query: 57  QREVYEKAVLFLKEQNFSKAYE-YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
             ++++KA        +  A + Y             + +         Y   K   +  
Sbjct: 20  NNDLFKKATDAYNNGKYDAAIKDYLQIIDN----GKHSAELYYNLGNSYYKLNKVAPSIY 75

Query: 116 LGEEYITQYPESK----NVDYVYYL 136
             E+ +   P       N+ Y   +
Sbjct: 76  YYEKALLLKPNDSEIKNNLAYAKNM 100


>gi|317486159|ref|ZP_07945002.1| N-acetylmuramoyl-L-alanine amidase [Bilophila wadsworthia 3_1_6]
 gi|316922586|gb|EFV43829.1| N-acetylmuramoyl-L-alanine amidase [Bilophila wadsworthia 3_1_6]
          Length = 537

 Score = 39.7 bits (92), Expect = 0.48,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 31/77 (40%), Gaps = 10/77 (12%)

Query: 112 QAASLGEEYI---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
            A    + Y+     YP+S   D   Y       ++   +  D+   + +LQ   +I+++
Sbjct: 220 DARRSVDRYLQLVRLYPKSSLADDSLYRAA----RLRGQILRDKAGAQELLQ---QILKK 272

Query: 169 YTNSPYVKGARFYVTVG 185
           Y +S   K A  Y+   
Sbjct: 273 YPSSNTAKDASSYLATL 289



 Score = 35.9 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 27/82 (32%), Gaps = 13/82 (15%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           +  +  +    ++V  Y  S     + +     R Q+           L+      A   
Sbjct: 219 KDARRSVDRYLQLVRLYPKSSLADDSLYRAARLRGQI-----------LRDKA--GAQEL 265

Query: 213 FQLVLANYSDAEHAEEAMARLV 234
            Q +L  Y  +  A++A + L 
Sbjct: 266 LQQILKKYPSSNTAKDASSYLA 287


>gi|300863751|ref|ZP_07108682.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506]
 gi|300338258|emb|CBN53828.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506]
          Length = 272

 Score = 39.7 bits (92), Expect = 0.48,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 74/221 (33%), Gaps = 23/221 (10%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
             +L   +LT+   IA+ +L       +     ++        E+ +KA     + +F K
Sbjct: 1   MIRLILTSLTVTLVIAITWLGNLTHAIALSSTPEAANPQEELGELVQKAFAATNKGDFIK 60

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           A  ++ Q    FP   +A  +       + S  K ++A    E+     P++ +  Y   
Sbjct: 61  AESFWTQIVEKFP--EIAP-AWSNRGNSRVSQNKLEEALLDYEKASELAPDAPD-PY--- 113

Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
              ++    +  +          +   +R++E     P    A          L   ++ 
Sbjct: 114 ---LNRGTALEGLGR----WSEAIASYNRVLELDPEDP---AAYNNRGNAEAGLGEWDLA 163

Query: 196 IGRYYLKRGEYVA---AIPRFQLVLANYSDAEHAEEAMARL 233
           I  Y  ++   +A   A  R    L  Y       EA+  +
Sbjct: 164 IADY--RKAADLAPEYAFARANYALTLYQ-TGETAEAITTM 201


>gi|150024185|ref|YP_001295011.1| hypothetical protein FP0071 [Flavobacterium psychrophilum JIP02/86]
 gi|149770726|emb|CAL42190.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86]
          Length = 592

 Score = 39.7 bits (92), Expect = 0.48,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 33/71 (46%), Gaps = 1/71 (1%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA-LALMDEAREVVSL 252
           + IG+ Y K+  ++ A+  +Q ++  +++  + +EA+    E Y   L  + +A+     
Sbjct: 506 LRIGKLYEKQNNFIQALNYYQQIIDQHANGIYIDEALFFTAEIYRKQLPDIAKAKTYYEK 565

Query: 253 IQERYPQGYWA 263
           I   +    + 
Sbjct: 566 IIFAHQDSIYF 576



 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 41/119 (34%), Gaps = 8/119 (6%)

Query: 68  LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
            + +N ++A + F           +   +LL    +      + QA +  ++ I Q+   
Sbjct: 477 YQNKN-TEALQAFETILLQHKGEKIEDITLLRIGKLYEKQNNFIQALNYYQQIIDQHANG 535

Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
             +D   +     Y + + D+            Y  +I+  + +S Y   AR      R
Sbjct: 536 IYIDEALFFTAEIYRKQLPDIA-------KAKTYYEKIIFAHQDSIYFVEARNNYRKLR 587


>gi|115378635|ref|ZP_01465786.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
 gi|310820610|ref|YP_003952968.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|115364347|gb|EAU63431.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
 gi|309393682|gb|ADO71141.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1]
          Length = 433

 Score = 39.7 bits (92), Expect = 0.48,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 51/179 (28%), Gaps = 26/179 (14%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKA----VLFLKEQNFSKAYEYF- 80
           I   +AV  L      +S     +       + ++ E A       ++  N++ A     
Sbjct: 6   ILIVLAVALLGAVTPSASAQAGFERGEKALAENQLGEAAVAYRQALMESPNWAPALNGLG 65

Query: 81  -------NQCSRDFPFAGVAR------KSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
                          F            +     +    AG +  A    E Y    PE 
Sbjct: 66  STLFKQGQTIEATALFRSATEADPEFKLAWFNLGYAARKAGDFATAVRAYERYTQLAPED 125

Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
            +    +Y +G SY Q  +             +      +R +   +V+ AR +V   R
Sbjct: 126 PDG---HYGLGESYRQQGQGAK-----ALAAYETYLEKEKRPSEQKWVEQAREHVAALR 176


>gi|29348871|ref|NP_812374.1| TPR domain-containing protein [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29340777|gb|AAO78568.1| TPR domain protein [Bacteroides thetaiotaomicron VPI-5482]
          Length = 584

 Score = 39.7 bits (92), Expect = 0.48,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 64/199 (32%), Gaps = 38/199 (19%)

Query: 61  YEKAVLFL--KEQNFSKAYEYFNQCSRDFPFAGVARK-SLLMSAFVQYSAGKYQQAASLG 117
           Y + +  L  ++    KA     Q    FP    A++  L     +     KY +  S  
Sbjct: 116 YSQGLASLYQQQNELDKAITLLEQMVVRFP----AKQDPLFNLLDLYGRQEKYDKVISTL 171

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
                   +++ +    + +   Y QM  D        K   Q +  +V+ Y        
Sbjct: 172 NRLEKHMGKNEQLSMEKFRI---YLQMKDD--------KKAFQEIESLVQEYP------- 213

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
               + +        +V +G  YL+ G+   A   +Q VLA   D      A+  +   Y
Sbjct: 214 ----MDM------RYQVILGDVYLQNGKKQEAYDVYQKVLAAEPD---NPMAIFSMASYY 260

Query: 238 VALALMDEAREVVSLIQER 256
                 +  ++ +  +   
Sbjct: 261 KQTGQEELYQQQLDTLLLN 279


>gi|58263450|ref|XP_569135.1| hypothetical protein [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134108368|ref|XP_777135.1| hypothetical protein CNBB3670 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50259820|gb|EAL22488.1| hypothetical protein CNBB3670 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57223785|gb|AAW41828.1| expressed protein [Cryptococcus neoformans var. neoformans JEC21]
          Length = 313

 Score = 39.7 bits (92), Expect = 0.48,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 35/120 (29%), Gaps = 26/120 (21%)

Query: 39  ERQSSRDVYLDSVTDVRYQR--EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
                R  +         +R  ++Y      + +  F  A +   +       +  A ++
Sbjct: 8   ASTPKRKPFTPKPPRPAEERLPKLYRALTDQVDDGYFENAIKTCKKILTLDASSRTAFQT 67

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV-----DYVYY-----------LVGMS 140
           LL   F+      Y  A SL +     +P  +        Y  Y           L G+S
Sbjct: 68  LL---FLHLQTDDYTSALSLLD-----HPSHEESLGFERAYCLYRLHREKEALEVLKGLS 119


>gi|301166057|emb|CBW25631.1| putative lipoprotein [Bacteriovorax marinus SJ]
          Length = 255

 Score = 39.7 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 36/82 (43%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           + +   R  R ++   +     +N + A  YF++   +FP +      LL  +       
Sbjct: 164 NKIKGKRRARILHNLGMSAYINKNNNDATVYFSKLFTEFPSSNYNANGLLYLSKTLQRLK 223

Query: 109 KYQQAASLGEEYITQYPESKNV 130
           K +QA    EE I ++P+SK V
Sbjct: 224 KNEQAKQTLEELIKRFPKSKKV 245



 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 8/62 (12%), Positives = 27/62 (43%)

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           A   F  +   +  + +    +  L +    L   ++A++ +  + +R+P+    +  ++
Sbjct: 191 ATVYFSKLFTEFPSSNYNANGLLYLSKTLQRLKKNEQAKQTLEELIKRFPKSKKVKEAKS 250

Query: 269 LV 270
           L+
Sbjct: 251 LL 252



 Score = 36.6 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 50/136 (36%), Gaps = 29/136 (21%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA--RKSLL-----MSAFVQYSAGKYQQA 113
           Y++A+      N+ +A    +    +     +   R++ +     MSA++  +      A
Sbjct: 138 YQEAMGAYTSGNYKRAQSLLSGLEAE---NKIKGKRRARILHNLGMSAYINKNNND---A 191

Query: 114 ASLGEEYITQYPESKNVDY----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
                 +   + E  + +Y    + YL         + +   ++  +   Q +  +++R+
Sbjct: 192 TVY---FSKLFTEFPSSNYNANGLLYL--------SKTLQRLKKN-EQAKQTLEELIKRF 239

Query: 170 TNSPYVKGARFYVTVG 185
             S  VK A+  +   
Sbjct: 240 PKSKKVKEAKSLLAKL 255


>gi|266619147|ref|ZP_06112082.1| putative tetratricopeptide repeat-containing domain protein
           [Clostridium hathewayi DSM 13479]
 gi|288869338|gb|EFD01637.1| putative tetratricopeptide repeat-containing domain protein
           [Clostridium hathewayi DSM 13479]
          Length = 560

 Score = 39.7 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 62/198 (31%), Gaps = 41/198 (20%)

Query: 71  QNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLG-------EEYI 121
            ++ KA E + +  + FP   +       L   +     G+Y++A           + Y 
Sbjct: 295 GDYRKAIECYEKDLKLFPEYMSFWKEIGQL---YAY--LGEYEKAEEAYGHTTKMDDYYS 349

Query: 122 TQ-----YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
                  Y  ++     +Y  G+  A   +     Q             ++ Y       
Sbjct: 350 RMGDLWFYQGNEKKALRFYKTGIENAAADKKAER-QSDLGEAY---MDQMQNYP------ 399

Query: 177 GARFYVTVGRNQ------LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            A  ++     +      L   E  + R Y + G+Y  A    +  L ++  +E   E  
Sbjct: 400 KAVVWLKRAIGRTTDHGDLFDYERYLARAYYRMGKYGPAREHAKAALEHFKLSEEGTE-- 457

Query: 231 ARLVEAYVALALMDEARE 248
               E Y+A      ARE
Sbjct: 458 ----EDYLAYGPYKPARE 471


>gi|295673993|ref|XP_002797542.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
 gi|226280192|gb|EEH35758.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
          Length = 830

 Score = 39.7 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 44/143 (30%), Gaps = 22/143 (15%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108
            D    +  Y     ++ +  + KAYE + Q        P              + Y   
Sbjct: 171 ADNGDAQSWYLLGRCYMSQAKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIN 224

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +Y+ A       I   P    +  V+Y +G +  +   +   D       L    R  E 
Sbjct: 225 QYRDALDAYSRAIRLNP---YISEVWYDLG-TLYESCNNQTND------ALDAYRRAAEL 274

Query: 169 YTNSPYVKGARFYVTVGRNQLAA 191
              + ++   +  + + ++  A 
Sbjct: 275 DPTNVHI---KARLQLLQSGQAG 294


>gi|166712749|ref|ZP_02243956.1| hypothetical protein Xoryp_15180 [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 266

 Score = 39.7 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 45/130 (34%), Gaps = 19/130 (14%)

Query: 64  AVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           A   L + ++++A E++       +         +L  A  Q+  G+ QQA    +  I 
Sbjct: 95  AETLLAQGDYAQAAEHYQGALRGLYSDDPH---LMLGLAKAQFGLGQPQQARQTLDALIA 151

Query: 123 QYPESKNVD-YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
             P  ++ D ++ Y   +           D   T+  L   + + + Y      + AR  
Sbjct: 152 ANPSFRSHDGHLLYARAV----------EDSGDTEAALHEYATLAQGYP----GEEARVR 197

Query: 182 VTVGRNQLAA 191
                 + A 
Sbjct: 198 YAQLLQRTAR 207


>gi|15804991|ref|NP_290110.1| cellulose synthase subunit BcsC [Escherichia coli O157:H7 EDL933]
          Length = 1154

 Score = 39.7 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 79/236 (33%), Gaps = 36/236 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 440 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 496

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 497 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 553

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197
             Q +       +  +V R   S  V      +   G+   A             ++ + 
Sbjct: 554 RAQWS-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 607

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            + L+R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 608 DWALQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 660



 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 353 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 409

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 410 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 455

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 456 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 504

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + ++ P      Y   L
Sbjct: 505 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 534


>gi|299538577|ref|ZP_07051860.1| hypothetical protein BFZC1_21303 [Lysinibacillus fusiformis ZC1]
 gi|298726164|gb|EFI66756.1| hypothetical protein BFZC1_21303 [Lysinibacillus fusiformis ZC1]
          Length = 422

 Score = 39.7 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 31/86 (36%), Gaps = 7/86 (8%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVA 93
            G   +++ D Y+ ++ D      ++  A    + Q +  A +   +     P  F+   
Sbjct: 185 AGAAYETAFDYYVKALEDEVKPDILFGAAYSAFQSQKYEMAIKQLEELKELDPDYFSAY- 243

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEE 119
               L+ A         Q+A +  +E
Sbjct: 244 ----LLLAESYAMTEDNQKAYAAIQE 265


>gi|294494031|gb|ADE92787.1| cellulose synthase operon protein C [Escherichia coli IHE3034]
          Length = 1140

 Score = 39.7 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 78/235 (33%), Gaps = 34/235 (14%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 426 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 482

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 483 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 539

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK-----------EVEIGR 198
             Q         +  +V R  N   ++ A      G+   A             ++ +  
Sbjct: 540 RGQWN-----SNIQELVNRLQNDQVLETANRLRENGKEAEAEAMLRQQPPSSRIDLTLAD 594

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 595 WAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 646


>gi|261253449|ref|ZP_05946022.1| hypothetical protein VIA_003474 [Vibrio orientalis CIP 102891]
 gi|260936840|gb|EEX92829.1| hypothetical protein VIA_003474 [Vibrio orientalis CIP 102891]
          Length = 389

 Score = 39.7 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 55/192 (28%), Gaps = 48/192 (25%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A  ++      +A + F Q   + P    A    L++ +      ++ +A          
Sbjct: 114 AKDYMASGFLDRAEKIFEQLVDE-PDHREAALQQLVAIY--QQTREWSKAIH-------- 162

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPY------DQRATK----LMLQYMSRIVERYTNSP 173
                   Y   LV M   +M   + +       Q   +       Q   + +       
Sbjct: 163 --------YASLLVKMGRKRMRTSIGHFWCELAMQEQAEGNHTQARQNFKKALTEDPRCV 214

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
               A                  G+ YL+  +Y   I   + VL    D++   E +  L
Sbjct: 215 RASIAL-----------------GKLYLEDEDYKRTIAYLEAVLE--QDSDFVSEVLPTL 255

Query: 234 VEAYVALALMDE 245
            E Y  L   DE
Sbjct: 256 AECYHHLGQEDE 267


>gi|242310689|ref|ZP_04809844.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
 gi|239523087|gb|EEQ62953.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
          Length = 318

 Score = 39.7 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 50/141 (35%), Gaps = 17/141 (12%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
           +S+ +   +S    +   E + +    L+E+ +  A EY             A K     
Sbjct: 185 ESAENNQKESKQPEKSLAEFFAEGEKLLEEKKYKLADEYLQT----------AIKGYYKP 234

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESK-NVDYVYYL--VGMSYAQMIRDVPYDQRATKL 157
           A   Y  G+   A    EE I  Y  S    D   Y+  + ++ A+    +       + 
Sbjct: 235 ARGNYLLGEIAFAQGRYEEAIYYYKTSATRYDKADYMPRLMLNSAKSFEKIN----DKEN 290

Query: 158 MLQYMSRIVERYTNSPYVKGA 178
             +++  ++  Y +S   K A
Sbjct: 291 AKKFLESLIALYPDSNEAKEA 311


>gi|254454611|ref|ZP_05068048.1| TPR protein [Octadecabacter antarcticus 238]
 gi|198269017|gb|EDY93287.1| TPR protein [Octadecabacter antarcticus 238]
          Length = 190

 Score = 39.7 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 18/135 (13%), Positives = 37/135 (27%), Gaps = 21/135 (15%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLG 117
           +Y +    +       A E+F       P FA     ++        Y  G Y  A    
Sbjct: 73  LYRRGEDAMGAGTPDVAVEHFTALVDHAPDFAEGYNGRAS-----AYYQMGLYGPAIDDL 127

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
            + +   P          + G++    + ++           Q ++ +V           
Sbjct: 128 RQVLVLEPRHFGA-----MTGVAVM--LEEIGR-PEDALEAWQRIASLVPTDP------E 173

Query: 178 ARFYVTVGRNQLAAK 192
               +   + QL  K
Sbjct: 174 VASMIDRLKIQLQGK 188


>gi|254422317|ref|ZP_05036035.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC
           7335]
 gi|196189806|gb|EDX84770.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC
           7335]
          Length = 987

 Score = 39.7 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 40/117 (34%), Gaps = 16/117 (13%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            + +   + + + +A   F + +R   F     K+     +V    G+   A    ++ I
Sbjct: 867 NRGLALTELERYEEAVASFEKATR---FNPKLAKAWDNRGYVLMRLGRDLDALKSFDKAI 923

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
              P        YY   + YA         QR   L L+ + + V    +  Y + A
Sbjct: 924 AVNPNYAK---AYYNRALCYAL--------QRDNDLALENLQQAVRLEPS--YKQEA 967



 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 23/172 (13%), Positives = 54/172 (31%), Gaps = 33/172 (19%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP------F 89
           +G   +    +  +         E  E+    L  + +  A   +++     P      F
Sbjct: 671 LGELTEKINRLEDNRPELFLTADEFIEEGDQQLANKQYEAALSAYDRALDVQPSNAELWF 730

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +    K LL          + ++A +  +E     P        +Y  G         + 
Sbjct: 731 SR--SKVLLEL-------DRKEEALAALDEVTKLTPSRIE---AWYQKG--------RLL 770

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT--VGRNQLAAKEVEIGRY 199
            + R  +  L+   + +E+         AR ++   +  ++L  +E  I  +
Sbjct: 771 RELRQYQSALEAFEQAIEQDP-----IDARVWLNKGMTLSRLRKREEAIAAF 817


>gi|162905561|emb|CAP58852.1| novel protein [Homo sapiens]
          Length = 263

 Score = 39.7 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 44/148 (29%), Gaps = 29/148 (19%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQ----------REVYEKAVLFLKEQNFSKAYE 78
                 L+G       D  LD       +           +++  AV      NF KA E
Sbjct: 70  MATGLVLIGTGSSVKLDKELDLAVKTMVEISRTQPLTRREQLHVSAVETFANGNFPKACE 129

Query: 79  YFNQCSRDFPFAGVARKSLLMSA-----FVQYSAGKYQQAASLGEEYITQYPE-SKNVDY 132
            + Q  +D P          M A        +  G  +Q           YP  + ++  
Sbjct: 130 LWEQILQDHPTD--------MLALKFSHDAYFYLGYQEQMRDSVAR---IYPFWTPDIPL 178

Query: 133 VYYLVGMSYAQMIRDVPYDQ--RATKLM 158
             Y+ G+    ++    YDQ  +  K  
Sbjct: 179 SSYVKGIYSFGLMETNFYDQAEKLAKEA 206


>gi|91213036|ref|YP_543022.1| cellulose synthase subunit BcsC [Escherichia coli UTI89]
 gi|117625813|ref|YP_859136.1| cellulose synthase subunit BcsC [Escherichia coli APEC O1]
 gi|218560606|ref|YP_002393519.1| cellulose synthase subunit BcsC [Escherichia coli S88]
 gi|218691814|ref|YP_002400026.1| cellulose synthase subunit BcsC [Escherichia coli ED1a]
 gi|237703300|ref|ZP_04533781.1| cellulose synthase subunit BcsC [Escherichia sp. 3_2_53FAA]
 gi|91074610|gb|ABE09491.1| cellulose synthase operon protein C [Escherichia coli UTI89]
 gi|115514937|gb|ABJ03012.1| cellulose synthase operon protein C [Escherichia coli APEC O1]
 gi|218367375|emb|CAR05154.1| cellulose synthase subunit [Escherichia coli S88]
 gi|218429378|emb|CAR10196.1| cellulose synthase subunit [Escherichia coli ED1a]
 gi|222035240|emb|CAP77985.1| Cellulose synthase operon protein C [Escherichia coli LF82]
 gi|226902564|gb|EEH88823.1| cellulose synthase subunit BcsC [Escherichia sp. 3_2_53FAA]
 gi|307628609|gb|ADN72913.1| cellulose synthase subunit BcsC [Escherichia coli UM146]
 gi|312948089|gb|ADR28916.1| cellulose synthase subunit BcsC [Escherichia coli O83:H1 str. NRG
           857C]
 gi|315286199|gb|EFU45635.1| tetratricopeptide repeat protein [Escherichia coli MS 110-3]
 gi|323949771|gb|EGB45655.1| cellulose synthase operon protein C [Escherichia coli H252]
 gi|323954928|gb|EGB50708.1| cellulose synthase operon protein C [Escherichia coli H263]
          Length = 1157

 Score = 39.7 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 78/235 (33%), Gaps = 34/235 (14%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK-----------EVEIGR 198
             Q         +  +V R  N   ++ A      G+   A             ++ +  
Sbjct: 557 RGQWN-----SNIQELVNRLQNDQVLETANRLRENGKEAEAEAMLRQQPPSSRIDLTLAD 611

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 612 WAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 663


>gi|71398866|ref|XP_802661.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70864444|gb|EAN81215.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 407

 Score = 39.7 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 17/146 (11%), Positives = 42/146 (28%), Gaps = 23/146 (15%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ-CS---RDFPFAGVARK 95
           +   +    ++        E+  K    +    + +A  Y+ +       +  F   A +
Sbjct: 122 KAKQKFEMRNNPYQGMSAEEIKNKGNELMGMAKYKEAIAYYTKSIEMEPENHVF--FANR 179

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +             Y  A    E  I   P         Y     Y+++   + Y ++  
Sbjct: 180 AA-----AHTHLKDYDSAVIDCERAIAINPN--------YSKA--YSRLGTSLFYQEKYA 224

Query: 156 KLMLQYMSRIVERYT-NSPYVKGARF 180
           +  +   ++  E    N  Y +  + 
Sbjct: 225 R-AVDAFAKASELDPTNDRYKEDLKQ 249


>gi|195473571|ref|XP_002089066.1| GE26218 [Drosophila yakuba]
 gi|194175167|gb|EDW88778.1| GE26218 [Drosophila yakuba]
          Length = 1135

 Score = 39.7 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 37/98 (37%), Gaps = 14/98 (14%)

Query: 109 KYQQAASLGEEYITQYPESKNVDYVY-YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           +Y +A S  ++Y+     +   ++ + Y +G++Y ++        R  K  ++    ++ 
Sbjct: 128 EYTEALSAYQKYLRFRENNYWTNHAFIYGIGVAYFKL--------RCFKWAIKSFQELLY 179

Query: 168 RYTNSPYVKGARFYVTVGRN-----QLAAKEVEIGRYY 200
              N          + +         +A K +++   Y
Sbjct: 180 LSPNFTCANEVHLRLGLMLKHCGEFHIAQKHLQLALLY 217


>gi|147903419|ref|NP_001084950.1| WD and tetratricopeptide repeats 1 [Xenopus laevis]
 gi|47122830|gb|AAH70541.1| MGC78868 protein [Xenopus laevis]
          Length = 671

 Score = 39.7 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 14/115 (12%), Positives = 37/115 (32%), Gaps = 21/115 (18%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYS---AGKYQQAASL 116
           +KA     +Q +S+A E +++  +  P     R ++L    A         G +  A   
Sbjct: 358 QKANDAFAQQQWSQAIELYSEAVQRAP-----RSAMLYGNRAAAYMKRKWDGDHYDALRD 412

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
             + +   P        ++ +     ++              L+ +     ++ +
Sbjct: 413 CLQALALNPAHLK---AHFRLARCLFELH--------YVSEALECLEEFKVKFPD 456


>gi|323345304|ref|ZP_08085527.1| hypothetical protein HMPREF0663_12063 [Prevotella oralis ATCC
           33269]
 gi|323093418|gb|EFZ35996.1| hypothetical protein HMPREF0663_12063 [Prevotella oralis ATCC
           33269]
          Length = 225

 Score = 39.3 bits (91), Expect = 0.50,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 78/211 (36%), Gaps = 30/211 (14%)

Query: 19  LYKFALTIFFSI-AVCFLVGWERQSSRDVYLDSVTDVRYQRE----VYEKAVLFLKEQNF 73
           ++K  L +FF + A+C          RD    ++  + Y  +      +KA   ++ Q +
Sbjct: 1   MFKKILFLFFGLIAICKSYAQSTNPIRDSLSVAMEQLAYHPDSIDLCLKKAGWNIQLQQW 60

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
             A E +++  +  P       +L   A+V    G+Y  A       +   P +      
Sbjct: 61  QYAQETYDRVLKRDPDN---IAALYYRAYVNEKQGRYSFARMDYNNLLKIIPGNFEA--- 114

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ--LAA 191
              +G++                  ++ ++R+VE+Y +S     AR  +   RN   LA 
Sbjct: 115 --QLGLALLNQKDH------HYTEAMEQINRLVEQYPDSAVAYAARAGIECERNMFELAE 166

Query: 192 KEVEIGRYYLKRGE----YVAAIPRFQLVLA 218
            +       +KR      Y+  + R  L++ 
Sbjct: 167 YDYAEA---VKRDAGNTDYI--LNRADLLIR 192


>gi|270003434|gb|EEZ99881.1| hypothetical protein TcasGA2_TC002665 [Tribolium castaneum]
          Length = 1709

 Score = 39.3 bits (91), Expect = 0.50,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 46/148 (31%), Gaps = 29/148 (19%)

Query: 58   REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR--KS--------LLMSAFVQYSA 107
             ++ E      ++    +A   +    + FP    A   K+        LL  +  +   
Sbjct: 1555 NKLLEDGNTLYRKGRLREAAHRYQYALKKFPTEDQAEHNKAFRQLHMNFLLNYSRCKRKL 1614

Query: 108  GKYQQAASLGEEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
             + ++A  L  E +   P+S    Y  YY    +          D +  +  L  M   +
Sbjct: 1615 NETEEAMELANEVLIMNPDS----YEAYYSRAKA--------KLDLKLYENALADMREAL 1662

Query: 167  ERYTNSPYVKGARFY--VTVGRNQLAAK 192
                     +       +   R+++A K
Sbjct: 1663 RLAP----AQNVEVRKVLAHLRDEIANK 1686


>gi|239996814|ref|ZP_04717338.1| putative unknown membrane associated protein [Alteromonas macleodii
           ATCC 27126]
          Length = 449

 Score = 39.3 bits (91), Expect = 0.50,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 1/72 (1%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
           ++ V    + +      ++  A L L + N+     Y  +         V  K+ ++ A 
Sbjct: 127 AKVVEQQPIPEKFEMTTLFSLAQLNLMQGNYDDTITYLERWESLNA-GPVPVKNKVIKAQ 185

Query: 103 VQYSAGKYQQAA 114
             Y   +Y+QAA
Sbjct: 186 AYYQNKQYEQAA 197


>gi|189235658|ref|XP_969896.2| PREDICTED: similar to rolling pebbles [Tribolium castaneum]
          Length = 1523

 Score = 39.3 bits (91), Expect = 0.50,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 46/148 (31%), Gaps = 29/148 (19%)

Query: 58   REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR--KS--------LLMSAFVQYSA 107
             ++ E      ++    +A   +    + FP    A   K+        LL  +  +   
Sbjct: 1369 NKLLEDGNTLYRKGRLREAAHRYQYALKKFPTEDQAEHNKAFRQLHMNFLLNYSRCKRKL 1428

Query: 108  GKYQQAASLGEEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
             + ++A  L  E +   P+S    Y  YY    +          D +  +  L  M   +
Sbjct: 1429 NETEEAMELANEVLIMNPDS----YEAYYSRAKA--------KLDLKLYENALADMREAL 1476

Query: 167  ERYTNSPYVKGARFY--VTVGRNQLAAK 192
                     +       +   R+++A K
Sbjct: 1477 RLAP----AQNVEVRKVLAHLRDEIANK 1500


>gi|21115529|gb|AAM43455.1| polysaccharide deacetylase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66575954|gb|AAY51364.1| polysaccharide deacetylase [Xanthomonas campestris pv. campestris
           str. 8004]
          Length = 952

 Score = 39.3 bits (91), Expect = 0.50,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 39/126 (30%), Gaps = 18/126 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           E+ +   KE+ ++ A E F +  +  P    A  +     FV Y   +Y +AA   E  +
Sbjct: 843 ERGLQLYKEKRYADAAEQFAEALKLRP--DFA-LAANNLGFVYYRQERYAEAARWLENTL 899

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPY--DQRATKLMLQYMSRIVERYTNSPYVKGAR 179
              P             ++Y  +        D+   +        +          + AR
Sbjct: 900 KIDPS----------RAVAYLNLGDAYAKAGDREKARKAYTTYLALQ---PQGAGAEQAR 946

Query: 180 FYVTVG 185
             +   
Sbjct: 947 AQLQTL 952


>gi|120598361|ref|YP_962935.1| TPR repeat-containing protein [Shewanella sp. W3-18-1]
 gi|120558454|gb|ABM24381.1| TPR repeat-containing protein [Shewanella sp. W3-18-1]
          Length = 663

 Score = 39.3 bits (91), Expect = 0.50,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 37/130 (28%), Gaps = 33/130 (25%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++A+   + Q++S A + F                       QY AG Y+QA    E+  
Sbjct: 359 QQAMQAYQSQDYSNAAKQFESPQWR--------------GSAQYKAGDYEQALKTFEQ-- 402

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                  +     Y  G +  Q+ +         K   Q        +        A+  
Sbjct: 403 ------DSSAQGLYNQGNALMQLGK-----PDKAKERYQAALEQQPNFP------DAKAN 445

Query: 182 VTVGRNQLAA 191
           + +    L  
Sbjct: 446 LALAEKLLEE 455


>gi|327275674|ref|XP_003222598.1| PREDICTED: cell division cycle protein 27 homolog [Anolis
           carolinensis]
          Length = 833

 Score = 39.3 bits (91), Expect = 0.50,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 59/195 (30%), Gaps = 48/195 (24%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       + ++A +     I   P   
Sbjct: 587 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELEKALACFRNAIRMNPRHY 636

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP-------YVKGARFY 181
           N    +Y +GM Y +        Q    L   +  + +     S         V+ A   
Sbjct: 637 N---AWYGLGMIYYK--------QEKFSLAEMHFQKALHINPQSSVLLCHIGVVQHALKK 685

Query: 182 VTVGRNQLAAKEVEI------GRYYLKRGEYVAAIPRFQLVLANYSDAEHA--EEAM--A 231
                + L  K + I       ++   R   + A  +++  L    + +    +E++   
Sbjct: 686 SEKALDTL-NKAINIDPKNPLCKF--HRASVLFANEKYKYALQELEELKQIVPKESLVYF 742

Query: 232 RLVEAYVALALMDEA 246
            + + Y  L     A
Sbjct: 743 LIGKVYKKLGQTHLA 757


>gi|306816118|ref|ZP_07450256.1| cellulose synthase subunit BcsC [Escherichia coli NC101]
 gi|305850514|gb|EFM50971.1| cellulose synthase subunit BcsC [Escherichia coli NC101]
          Length = 1157

 Score = 39.3 bits (91), Expect = 0.50,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 78/235 (33%), Gaps = 34/235 (14%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK-----------EVEIGR 198
             Q         +  +V R  N   ++ A      G+   A             ++ +  
Sbjct: 557 RGQWN-----SNIQELVNRLQNDQVLETANRLRENGKEAEAEAMLRQQPPSSRIDLTLAD 611

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 612 WAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 663


>gi|304391251|ref|ZP_07373195.1| putative tetratricopeptide repeat protein [Ahrensia sp. R2A130]
 gi|303296607|gb|EFL90963.1| putative tetratricopeptide repeat protein [Ahrensia sp. R2A130]
          Length = 228

 Score = 39.3 bits (91), Expect = 0.50,   Method: Composition-based stats.
 Identities = 13/100 (13%), Positives = 35/100 (35%), Gaps = 3/100 (3%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
            +K   TI  ++AV  ++       R +   +  +     + +  AV   ++    +A  
Sbjct: 22  FWKRFGTIIIALAVAIVLAVSVW--RYMEYSAAKEAAASGDAFMSAVALAEDGKTEEAIA 79

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
              +   +         + L +A      G+ ++A +  +
Sbjct: 80  ALEKLEAEH-GGAYGAMAQLRAASELAKQGQKKEAIAAYD 118


>gi|282901136|ref|ZP_06309067.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
 gi|281193968|gb|EFA68934.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
          Length = 274

 Score = 39.3 bits (91), Expect = 0.50,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 67/207 (32%), Gaps = 46/207 (22%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAAS 115
            E+  +A     + +F+ A +Y+ +    FP      + +        + S  K + A +
Sbjct: 45  DELATQAFAATDKGDFATAEKYWTEIIERFPTNAGAWSNR-----GNSRVSQNKLEAALT 99

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
              + I   P   +  Y      ++    +  +       +  +   + ++E        
Sbjct: 100 DYNQAIKLAPNVTD-PY------LNRGTALEGLGK----WQEAIADYNHVLELDPQ---- 144

Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE----AMA 231
                      + +A         Y  RG   A + ++Q  +A+Y  A         A A
Sbjct: 145 -----------DAMA---------YNNRGNAQAGLGKWQEAIADYQKATQIAPNFAFARA 184

Query: 232 RLVEAYVALALMDEAREVVSLIQERYP 258
               A   +   ++A + +  I  +YP
Sbjct: 185 NYALAMYEIGKKEQAEKEMRNIVRKYP 211


>gi|73669941|ref|YP_305956.1| hypothetical protein Mbar_A2461 [Methanosarcina barkeri str.
           Fusaro]
 gi|72397103|gb|AAZ71376.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 398

 Score = 39.3 bits (91), Expect = 0.50,   Method: Composition-based stats.
 Identities = 19/176 (10%), Positives = 52/176 (29%), Gaps = 46/176 (26%)

Query: 38  WERQSSRDVYLDSVTDVRYQREV----YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
              +       DS   +    ++    + K  +      + +A E ++   +  P   +A
Sbjct: 169 CRLKQHEKALGDSEKALSSNPKLGGAWHSKGSVLADLGRYEEAIEAYDAALKLNP--NLA 226

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES-------------------------- 127
            + L+   F  YS  +  +A    +  +   P++                          
Sbjct: 227 -RVLVGKGFALYSLDRPVEAMIAYDAALKINPDNAKNWIGKGLIHLKLGKFKRAIAACSK 285

Query: 128 -----KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
                 +    +Y  GM+++ + ++           L  + R +    ++   + A
Sbjct: 286 AISIKPDSSDAWYCKGMAFSSLDKN--------GEALGALERALRIDPDNIEARKA 333


>gi|315295811|gb|EFU55128.1| tetratricopeptide repeat protein [Escherichia coli MS 16-3]
          Length = 1157

 Score = 39.3 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 78/235 (33%), Gaps = 34/235 (14%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK-----------EVEIGR 198
             Q         +  +V R  N   ++ A      G+   A             ++ +  
Sbjct: 557 RGQWN-----SNIQELVNRLQNDQVLETANRLRENGKEAEAEAMLRQQPPSSRIDLTLAD 611

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 612 WAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 663


>gi|158336407|ref|YP_001517581.1| TPR domain-containing protein [Acaryochloris marina MBIC11017]
 gi|158306648|gb|ABW28265.1| TPR domain protein [Acaryochloris marina MBIC11017]
          Length = 449

 Score = 39.3 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 48/130 (36%), Gaps = 17/130 (13%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLK-EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
           + V +          + + +AV+    + +   A    ++  R  P    + ++ L    
Sbjct: 241 QSVAVSIPKQPSTADDYFLQAVMKQNVQGDLPGAMAALDEAIRLNPG--YS-QAFLTRGR 297

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL-VGMSYAQMIRDVPYDQRATKLMLQY 161
           V ++ G   QA +   + I  +P+     YV YL   + + Q+        + T+  L  
Sbjct: 298 VNHARGNLTQALADFNQSIRIHPKG----YVGYLHRAIVHGQL--------KDTQQALAD 345

Query: 162 MSRIVERYTN 171
             +++    N
Sbjct: 346 YDQVIRLNPN 355


>gi|300795423|ref|NP_001179178.1| serine/threonine-protein phosphatase 5 [Bos taurus]
 gi|297485750|ref|XP_002695147.1| PREDICTED: protein phosphatase 5, catalytic subunit [Bos taurus]
 gi|296477574|gb|DAA19689.1| protein phosphatase 5, catalytic subunit [Bos taurus]
          Length = 499

 Score = 39.3 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 48/156 (30%), Gaps = 31/156 (19%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF-- 102
              +   ++   E+  +A  + K +++  A ++++Q     P        +S    A+  
Sbjct: 18  EPPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS---LAYLR 74

Query: 103 --VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
                Y+     +A  + ++YI            YY    S   +           +  L
Sbjct: 75  TECYGYALADATRAVEMDKKYIK----------GYYRRAASNMAL--------GKFRAAL 116

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           +    +V+   +      A+         +  K  E
Sbjct: 117 RDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 149


>gi|331659838|ref|ZP_08360776.1| cellulose synthase operon protein C [Escherichia coli TA206]
 gi|331053053|gb|EGI25086.1| cellulose synthase operon protein C [Escherichia coli TA206]
          Length = 1157

 Score = 39.3 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 78/235 (33%), Gaps = 34/235 (14%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK-----------EVEIGR 198
             Q         +  +V R  N   ++ A      G+   A             ++ +  
Sbjct: 557 RGQWN-----SNIQELVNRLQNDQVLETANRLRENGKEAEAEAMLRQQPPSSRIDLTLAD 611

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 612 WAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 663


>gi|226313169|ref|YP_002773063.1| hypothetical protein BBR47_35820 [Brevibacillus brevis NBRC 100599]
 gi|226096117|dbj|BAH44559.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 1139

 Score = 39.3 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 53/161 (32%), Gaps = 28/161 (17%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV-ARKSLLMSAFVQ------Y-SAGKYQQA 113
             A  F    ++  A +Y+ Q      FA     ++    A V       Y    + ++A
Sbjct: 813 NIAKQFKLNGDYKSAEKYYYQIIDFCRFAEHHVPQAKTTIASVYSSLCLMYIDLEETEKA 872

Query: 114 ASLGEEYIT----QYPE--SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
               ++ I      YP     ++   Y  +G++Y    +          L  +Y  R   
Sbjct: 873 IGYSQQAIAINEMFYPNKEHPDLARDYNNLGLAYLYSHK--------YDLAKKYFKRAYR 924

Query: 168 RYTNSPYVKGARFYVTVGRNQL-----AAKEVEIGRYYLKR 203
            Y  + Y       +    N L     A K++E+ + Y + 
Sbjct: 925 IY-KNIYENEINVDLVSVTNNLGMVSEAQKDLEVAKGYYET 964


>gi|149926798|ref|ZP_01915057.1| Tetratricopeptide TPR_2 [Limnobacter sp. MED105]
 gi|149824350|gb|EDM83568.1| Tetratricopeptide TPR_2 [Limnobacter sp. MED105]
          Length = 365

 Score = 39.3 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 72/209 (34%), Gaps = 52/209 (24%)

Query: 7   RAICIFEAWAYQLYKFALTIFFS-IAVCFLVGWERQS---SRDVYLDSVTDVRYQREVY- 61
           + I    +  Y+  K+AL I    +A     G+  +S   S+ +        + + + Y 
Sbjct: 5   KTITSSISGKYKKSKYALLIALMGLAFAGAPGYADESDEVSKLIQSGQFEQAQARADAYL 64

Query: 62  ----EKAVLFL-------KEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAG 108
                 A +         +    ++A   F + + DFP         ++L   +     G
Sbjct: 65  ANRPNDAQMRFLKGLILTERNKTAEAITVFTKLTEDFPELPEPYNNLAVL---YA--GRG 119

Query: 109 KYQQAASLGEEYITQYP----ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           +Y++A    E  I  +P      +N+  VY                     KL  Q   +
Sbjct: 120 EYEKARESLEMAIRTHPSYATAHENLGDVY--------------------AKLASQSYDK 159

Query: 165 IVERYT-NSPYVKGARFYVTVGRNQLAAK 192
            ++    NS     A+  +++ RN +A K
Sbjct: 160 ALQLDGCNS----TAQTKLSLVRNLIAGK 184


>gi|59713865|ref|YP_206640.1| transporter [Vibrio fischeri ES114]
 gi|59482113|gb|AAW87752.1| transporter [Vibrio fischeri ES114]
          Length = 635

 Score = 39.3 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 31/87 (35%), Gaps = 7/87 (8%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEY----FN-QCSRDFPFAGVARKSLLMSAFV 103
           D     +Y+++ Y+ A    + + +  A +Y    +          +    +S    A  
Sbjct: 347 DYNAHQQYEQKEYQAASEQFQSKQWKGAAQYKAGDYKGAIESLTGLSD--VQSQYNLANA 404

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNV 130
               G+ + A +  E  +   P+ K+ 
Sbjct: 405 LAQNGQLEDAKAQYESLLQANPDMKDA 431


>gi|26250164|ref|NP_756204.1| cellulose synthase subunit BcsC [Escherichia coli CFT073]
 gi|227883691|ref|ZP_04001496.1| cellulose synthase subunit BcsC [Escherichia coli 83972]
 gi|300971350|ref|ZP_07171419.1| tetratricopeptide repeat protein [Escherichia coli MS 45-1]
 gi|301046599|ref|ZP_07193739.1| tetratricopeptide repeat protein [Escherichia coli MS 185-1]
 gi|26110593|gb|AAN82778.1|AE016768_196 Cellulose synthase operon protein C [Escherichia coli CFT073]
 gi|227839271|gb|EEJ49737.1| cellulose synthase subunit BcsC [Escherichia coli 83972]
 gi|300301437|gb|EFJ57822.1| tetratricopeptide repeat protein [Escherichia coli MS 185-1]
 gi|300411274|gb|EFJ94812.1| tetratricopeptide repeat protein [Escherichia coli MS 45-1]
 gi|307555633|gb|ADN48408.1| cellulose synthase subunit [Escherichia coli ABU 83972]
 gi|315295429|gb|EFU54759.1| tetratricopeptide repeat protein [Escherichia coli MS 153-1]
          Length = 1157

 Score = 39.3 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 78/235 (33%), Gaps = 34/235 (14%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK-----------EVEIGR 198
             Q         +  +V R  N   ++ A      G+   A             ++ +  
Sbjct: 557 RGQWN-----SNIQELVNRLQNDQVLETANRLRENGKEAEAEAMLRQQPPSSRIDLTLAD 611

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 612 WAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 663


>gi|14324257|dbj|BAB59185.1| hypothetical protein [Thermoplasma volcanium GSS1]
          Length = 240

 Score = 39.3 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 62/203 (30%), Gaps = 44/203 (21%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEE 119
           E+ + +     + KA E F +       + +   + L        YS   Y QA    E 
Sbjct: 25  ERGISYFNIGKYDKAVEEFTK-----AISIINDDADLYHNRGMAYYSMKAYDQAIEDFER 79

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            I+  P S +           Y   +  V  D    +  L+  +  +             
Sbjct: 80  SISLDPNSSD-----------YHNALGSVYEDMGNYEKALEEFNSAIR------------ 116

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA-NYSDAEHAEEAMARLVEAYV 238
                  + L       G  Y K GE   AI  +      +Y+D  +      +  EA  
Sbjct: 117 -----LEDDLPDYYYNRGNVYWKLGEIEKAIQDYSKAADLDYTDQIYV----YKKYEALT 167

Query: 239 ALALMDEA----REVVSLIQERY 257
           +L   DEA     + + ++   Y
Sbjct: 168 SLGRYDEALETVDKAIKVVPANY 190


>gi|95929845|ref|ZP_01312586.1| hypothetical protein Dace_2499 [Desulfuromonas acetoxidans DSM 684]
 gi|95134141|gb|EAT15799.1| hypothetical protein Dace_2499 [Desulfuromonas acetoxidans DSM 684]
          Length = 786

 Score = 39.3 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 23/148 (15%), Positives = 54/148 (36%), Gaps = 31/148 (20%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRD---FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +A ++  + +++ A E +   +     FP + +A  ++       Y    Y  A    + 
Sbjct: 341 QADVWFDQGDYAAAVERYQSLANQLADFP-SSLANFAM-----SLYRQKDYDGAIVQLKR 394

Query: 120 YIT--QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           ++     PES+++    YL+ MS   MI     D          + +I+     +     
Sbjct: 395 FLEGVDDPESRDM--ARYLLAMS---MIHRGDKDAG-----YDLLHQII---PGTQGALL 441

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
           A+  +       A   + +  ++ +R  
Sbjct: 442 AKAKI-------ADLSMVVDDFHSRRRA 462


>gi|332711481|ref|ZP_08431412.1| hypothetical protein LYNGBM3L_67770 [Lyngbya majuscula 3L]
 gi|332349459|gb|EGJ29068.1| hypothetical protein LYNGBM3L_67770 [Lyngbya majuscula 3L]
          Length = 922

 Score = 39.3 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 39/103 (37%), Gaps = 5/103 (4%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSV--TDVRYQREVYEKAVLFLKEQNFSKAYEY 79
             +   FS+ VC  +G     ++     ++  T      ++ E+ V + +  ++  A E 
Sbjct: 13  LGILFLFSLTVCIGLGHLPSIAQPAEPGNMATTQAANPSQLVEQGVEYYQAGDYQGAIEP 72

Query: 80  FNQCSRDFPFA-GVARKSLL--MSAFVQYSAGKYQQAASLGEE 119
           +    + +  +      +++    A      G  Q+A S  E+
Sbjct: 73  WQNALKLYQQSNNYTNSAIVRENLARAYQKIGHIQEAISNWEQ 115


>gi|298248115|ref|ZP_06971920.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297550774|gb|EFH84640.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 652

 Score = 39.3 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 64/204 (31%), Gaps = 42/204 (20%)

Query: 71  QNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
               +A   F Q     P   +  + K +L+        G++++A    E+ I   P + 
Sbjct: 465 GRAEEALTAFEQVIHLEPTRISAYSHKGILLRT-----LGRHEEALEAFEQSIRLDPTNA 519

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYVKGARF--YVTV 184
           +     Y    +  +++  +       +  L+   + +       S Y         +  
Sbjct: 520 DA----YQ---AKGEVLDTLGR----LEEALEAFEQSIRLNPKDASVYFSKGLTLWGLKH 568

Query: 185 GRNQLAAKEVEI------GRYYLKR-------GEYVAAIPRFQLVL-------ANYSDAE 224
               LA  E  I        +Y  +       G    A+   +  +         Y +  
Sbjct: 569 MEEALANFEYAIQLDPKNATFYRTKGILLRIIGHNEEALTALEYAVQLRPNDAEAYQNKG 628

Query: 225 HAEEAMARLVEAYVALALMDEARE 248
           +A E + R+ EA+ A     E RE
Sbjct: 629 YALEKLGRMSEAHQAYQKAHELRE 652


>gi|256848362|ref|ZP_05553805.1| conserved hypothetical protein [Lactobacillus coleohominis
           101-4-CHN]
 gi|256714960|gb|EEU29938.1| conserved hypothetical protein [Lactobacillus coleohominis
           101-4-CHN]
          Length = 237

 Score = 39.3 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 40/107 (37%), Gaps = 10/107 (9%)

Query: 19  LYKFALT-----IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF 73
           + K AL+     + F +A C         +       VT+     + Y+KA   + +  +
Sbjct: 8   MSKLALSTAGVALVFGLAGCGQKNSASSDNNSTKSAKVTE-SAADKAYKKANDLITKGQY 66

Query: 74  SKAYEYFNQCS---RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            KAY+  +      +   +      S L  A   Y+ G YQ+A +  
Sbjct: 67  QKAYDLLDDVEHENKKVEYLEEDLDSYLE-AREDYNKGDYQEAEAEL 112


>gi|223935814|ref|ZP_03627729.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514]
 gi|223895415|gb|EEF61861.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514]
          Length = 893

 Score = 39.3 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 68/198 (34%), Gaps = 42/198 (21%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG----VARKSLLMSAFVQYSAGKYQQAASL 116
           Y+  V   +  N+ +A E F++     P           + L  + + YS      A + 
Sbjct: 709 YQLGVTLARGGNYRQAIEQFDRARTLTPENNNCNLW--LAQLYISTLHYSN-----ALAA 761

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
             + +   P   +     +  G+S  Q+        +     +  +++++   TN+ Y  
Sbjct: 762 VNKALDAAPNDPD---ALFFKGISLIQL--------KDYDGAIPPLNQLLNLQTNN-YSA 809

Query: 177 GARFYVTVGRN---QLAAKEVE----IG-----RYY------LKRGEYVAAIPRFQLVLA 218
                +    +     A K+ E    +       YY       +  +  AAI  ++  L 
Sbjct: 810 KLNRAIAYLHSGDLSAARKDYESITSVAPKVYQAYYGLAEIAYRNKDKPAAINYYKSYLT 869

Query: 219 NY-SDAEHAEEAMARLVE 235
           N   D +  ++  +RL E
Sbjct: 870 NAPPDTDEVKQVESRLKE 887


>gi|162453730|ref|YP_001616097.1| hypothetical protein sce5454 [Sorangium cellulosum 'So ce 56']
 gi|161164312|emb|CAN95617.1| hypothetical protein predicted by Glimmer/Critica [Sorangium
           cellulosum 'So ce 56']
          Length = 525

 Score = 39.3 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 40/131 (30%), Gaps = 13/131 (9%)

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           S    + D      +     Q  + +  R+  SP    A         ++A         
Sbjct: 373 SDLHALGDAARLGGSPARAAQAFASLRARFPGSPEAASA----AFLLGRIAQ-------- 420

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
             +  ++ AA   F   L        A EA  RLVEA         AR         +P 
Sbjct: 421 -DQSKDHAAAARWFARYLREQPAGAFAAEAAGRLVEAEDRRGDEAGARRAAEQYLAAHPS 479

Query: 260 GYWARYVETLV 270
           G  A Y + ++
Sbjct: 480 GSHAGYAKHVL 490



 Score = 35.5 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 28/78 (35%), Gaps = 1/78 (1%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF-VQYSA 107
           D++ D     +++          + ++A + F      FP +  A  +  +     Q  +
Sbjct: 364 DALCDAASASDLHALGDAARLGGSPARAAQAFASLRARFPGSPEAASAAFLLGRIAQDQS 423

Query: 108 GKYQQAASLGEEYITQYP 125
             +  AA     Y+ + P
Sbjct: 424 KDHAAAARWFARYLREQP 441


>gi|15604101|ref|NP_220616.1| hypothetical protein RP230 [Rickettsia prowazekii str. Madrid E]
 gi|3860793|emb|CAA14693.1| unknown [Rickettsia prowazekii]
 gi|292571827|gb|ADE29742.1| hypothetical protein rpr22_CDS225 [Rickettsia prowazekii Rp22]
          Length = 250

 Score = 39.3 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 50/159 (31%), Gaps = 27/159 (16%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           TD   ++++++ A+L     N SK  + F       P+    +++    A   Y   K  
Sbjct: 82  TDDFKKQDIFDIALLEGMHDNVSK--KTFEVNKDIAPY----KQA-YDLALAAYKDNKLT 134

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           +A    + +I +YP +  +   Y+     + +               + Y+    E    
Sbjct: 135 EAKDKFKNFIQKYPNNSLISNAYFWYAECFFKQKD-------YNGAAINYLKCYKES-PK 186

Query: 172 SPYVKGA----------RFYVTVGRNQLAA--KEVEIGR 198
                               +    N LA   KE  I R
Sbjct: 187 GAKSSDGLLKLALSLGELKKMQEACNILAKLDKEFPINR 225



 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 32/86 (37%), Gaps = 1/86 (1%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
           +  L G     S+  + +   D+   ++ Y+ A+   K+   ++A + F    + +P   
Sbjct: 93  IALLEGMHDNVSKKTF-EVNKDIAPYKQAYDLALAAYKDNKLTEAKDKFKNFIQKYPNNS 151

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLG 117
           +   +    A   +    Y  AA   
Sbjct: 152 LISNAYFWYAECFFKQKDYNGAAINY 177


>gi|308270597|emb|CBX27209.1| hypothetical protein N47_A12380 [uncultured Desulfobacterium sp.]
          Length = 286

 Score = 39.3 bits (91), Expect = 0.52,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 27/72 (37%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +     +  ++  A   F+   +      +  K+L       +    ++ AAS  ++ 
Sbjct: 56  YNRGCAAYQNSDYKAADAAFSSVLKRTDDKELRYKALYNLGNTAFKQKDFESAASYYKQA 115

Query: 121 ITQYPESKNVDY 132
           I   P S++  Y
Sbjct: 116 IICNPNSEDAGY 127


>gi|302039008|ref|YP_003799330.1| putative soluble lytic murein transglycosylase [Candidatus
           Nitrospira defluvii]
 gi|300607072|emb|CBK43405.1| putative Soluble lytic murein transglycosylase [Candidatus
           Nitrospira defluvii]
          Length = 745

 Score = 39.3 bits (91), Expect = 0.52,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 62/198 (31%), Gaps = 19/198 (9%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
               LK+    +A E      +  P + +  K+   +    YSA    +A       +  
Sbjct: 130 GESLLKQNEPIQAAELLETIPKIVPDSSLIAKAAYRTGEAWYSANVCFRAVDWLGRAVVL 189

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
             +        +     + +  R               + ++  RY +SP  + A+  + 
Sbjct: 190 AEKDPAAPLALWHQAECHIRENRLP--------EARTALKQLWLRYPHSPEAREAKARLD 241

Query: 184 VGRNQLAAKEVE--IGRYYLKRGEYVA------AIPRFQLVLANYSDAEHAEEAMARLVE 235
                L  +        + ++   ++       A+   +  LA         +A  +L  
Sbjct: 242 TA---LGGESWAPTAEDHSIRAQAFLGLAMQAEAVEELRRFLAMAPGHPRRFDARLKLGV 298

Query: 236 AYVALALMDEAREVVSLI 253
           AYV L   D+ARE    +
Sbjct: 299 AYVRLKQYDQARETFRAL 316


>gi|262199604|ref|YP_003270813.1| hypothetical protein Hoch_6451 [Haliangium ochraceum DSM 14365]
 gi|262082951|gb|ACY18920.1| Tetratricopeptide TPR_4 [Haliangium ochraceum DSM 14365]
          Length = 282

 Score = 39.3 bits (91), Expect = 0.52,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 23/75 (30%), Gaps = 6/75 (8%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL-MSAFVQYSA 107
           D        R +Y +         + +A E F        F    R +LL          
Sbjct: 33  DDEDTDERARTLYMEGEAHYAAGRYEEAAESF--LEA---FNLSGRTALLFNLGNAYERM 87

Query: 108 GKYQQAASLGEEYIT 122
           G Y++AA     Y+ 
Sbjct: 88  GDYERAAEYLRRYVD 102


>gi|193786429|dbj|BAG51712.1| unnamed protein product [Homo sapiens]
          Length = 708

 Score = 39.3 bits (91), Expect = 0.52,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 6/68 (8%)

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           F  Y  G+Y +A    + Y+  +P+ ++V     L  + Y + + D   D  A+    + 
Sbjct: 314 FAYYRVGEYVKALECAKAYLLCHPDDEDV-----LDNVDYYESLLDDSIDP-ASIEARED 367

Query: 162 MSRIVERY 169
           ++  V+R+
Sbjct: 368 LTMFVKRH 375


>gi|119510581|ref|ZP_01629711.1| TPR repeat protein [Nodularia spumigena CCY9414]
 gi|119464742|gb|EAW45649.1| TPR repeat protein [Nodularia spumigena CCY9414]
          Length = 422

 Score = 39.3 bits (91), Expect = 0.52,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 44/124 (35%), Gaps = 16/124 (12%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            E Y + +   K+++++ A E F+   +  P+   A  + L      Y +G   +A S  
Sbjct: 3   DEFYNQGLKKAKDKDYAGAIEEFSNSLQLIPY--FA-DAFLQRGLAYYHSGAIHKAVSDY 59

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
            E +   P S +    YY  G++  ++              L  +   +    NS Y   
Sbjct: 60  TEAVRLNPGSMDG---YYCRGLARLELKNLPG--------ALSDVDMAIRL--NSDYAPA 106

Query: 178 ARFY 181
               
Sbjct: 107 YNLR 110


>gi|13324596|gb|AAK18801.1|AF305609_1 LMP1 [Borrelia burgdorferi]
          Length = 1173

 Score = 39.3 bits (91), Expect = 0.52,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 44/220 (20%)

Query: 62   EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLG 117
            +  ++     NF ++ EY N       F   A+K    ++   +  ++   K +++    
Sbjct: 935  KAGIVSNNLGNFKQSEEYLNF------FNANAKKPNEIAIYNLSIAKFENNKLEESLETI 988

Query: 118  EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYV 175
             + I   P  +  +Y  YL      +            +  +   S ++E+     S Y+
Sbjct: 989  NKAIDLNP--EKSEY-LYLKASINLKK--------ENYQNAISLYSLVIEKNPENTSAYI 1037

Query: 176  KGARFYVTVGRNQLAAKEVE-------------IGRYYLKRGEYVAAIPRFQLVLANYSD 222
              A+ Y   G    A   +E             +G  Y K   Y  AI  F+  + N   
Sbjct: 1038 NLAKAYEKSGNKSQAISTLEKIINKNNKLALNNLGILYKKEKNYQKAIEIFEKAIIN--- 1094

Query: 223  AEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQ 259
                 EA   L    + +     A++++     ++   P+
Sbjct: 1095 --SDIEAKYNLATTLIEINDNTRAKDLLREYTKLKPNNPE 1132



 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 3/62 (4%)

Query: 60   VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            +Y KA + LK++N+  A   ++      P       + +  A     +G   QA S  E+
Sbjct: 1002 LYLKASINLKKENYQNAISLYSLVIEKNPEN---TSAYINLAKAYEKSGNKSQAISTLEK 1058

Query: 120  YI 121
             I
Sbjct: 1059 II 1060



 Score = 35.5 bits (81), Expect = 8.6,   Method: Composition-based stats.
 Identities = 11/124 (8%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
            +   ++  D +  + +   A  +    +  KA   + +  +        ++       +
Sbjct: 786 NEFLKNNPNDAQASKTL---AQAYENNGDLLKAENAYEKIIKL----TNTQEDHYKLGII 838

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           ++   KY+ +    ++ I   P+ K      +  G++   + ++        K  ++   
Sbjct: 839 RFKLKKYEHSIESFDQTIKLDPKHKK---ALHNKGIALMMLNKN--------KKAIESFE 887

Query: 164 RIVE 167
           + ++
Sbjct: 888 KAIQ 891



 Score = 35.1 bits (80), Expect = 9.4,   Method: Composition-based stats.
 Identities = 39/279 (13%), Positives = 77/279 (27%), Gaps = 74/279 (26%)

Query: 29   SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSR 85
            ++A  +    +   + + Y   +     Q + Y+  ++  K + +  + E F+   +   
Sbjct: 801  TLAQAYENNGDLLKAENAYEKIIKLTNTQEDHYKLGIIRFKLKKYEHSIESFDQTIKLDP 860

Query: 86   DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
                    +K+L           K ++A    E+ I      KN    YY  G++  +  
Sbjct: 861  KH------KKALHNKGIALMMLNKNKKAIESFEKAIQI---DKNYGTAYYQKGIAEEKN- 910

Query: 146  RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------------RFYVTVGR------ 186
                      +              N  Y   A               Y+          
Sbjct: 911  -------GDMQQAFASFKNAYNLDKNPNYALKAGIVSNNLGNFKQSEEYLNFFNANAKKP 963

Query: 187  NQLAAKEVEIGRY------------------------Y--------LKRGEYVAAIPRFQ 214
            N++A   + I ++                        Y        LK+  Y  AI  + 
Sbjct: 964  NEIAIYNLSIAKFENNKLEESLETINKAIDLNPEKSEYLYLKASINLKKENYQNAISLYS 1023

Query: 215  LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            LV+    +   A      L +AY       +A   +  I
Sbjct: 1024 LVIEKNPENTSAY---INLAKAYEKSGNKSQAISTLEKI 1059


>gi|260062650|ref|YP_003195730.1| hypothetical protein RB2501_13704 [Robiginitalea biformata
           HTCC2501]
 gi|88784217|gb|EAR15387.1| hypothetical protein RB2501_13704 [Robiginitalea biformata
           HTCC2501]
          Length = 334

 Score = 39.3 bits (91), Expect = 0.52,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 27/80 (33%), Gaps = 9/80 (11%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            +++ +     +  ++  A   + +   D P   VA ++    A +    G    A    
Sbjct: 241 SDLFVRGKRLAQTGDWDGAARLWER-ETDHPKGKVAGRAFYNMAIINEINGDLDAAIDWA 299

Query: 118 EE----YITQYPESKNVDYV 133
                 + T++     +DY 
Sbjct: 300 RRSYADFGTRH----ALDYA 315


>gi|83941127|ref|ZP_00953589.1| TPR domain protein [Sulfitobacter sp. EE-36]
 gi|83846947|gb|EAP84822.1| TPR domain protein [Sulfitobacter sp. EE-36]
          Length = 206

 Score = 39.3 bits (91), Expect = 0.52,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 25/69 (36%), Gaps = 7/69 (10%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLG 117
           +Y +    + E + + A  +    +   P FA     ++        ++AG Y  A    
Sbjct: 89  LYSRGRDAMSEGDTTLAIAHLTALTDHAPDFAEGYHARAQ-----AYFAAGLYGPAIDDL 143

Query: 118 EEYITQYPE 126
           E  +   P+
Sbjct: 144 ETTLALNPQ 152


>gi|330448835|ref|ZP_08312480.1| tetratricopeptide repeat family protein [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328493026|dbj|GAA06977.1| tetratricopeptide repeat family protein [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 288

 Score = 39.3 bits (91), Expect = 0.52,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 38/109 (34%), Gaps = 17/109 (15%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y + ++ +   ++  A E F +  +   +     K  +  AF          A S  ++ 
Sbjct: 158 YNRGMIHIANNDYKSALECFEKIEKSNAY-INTPKFWINRAFAAKRTDNVSDAMSFIDKA 216

Query: 121 ITQYPESKNVDYVYY-------LVG------MSYAQMIRDVPYDQRATK 156
           +   P +    Y  Y       L+G      +   Q ++++  D   TK
Sbjct: 217 LKIAPNNI---YALYNKLCYSCLLGKEDIELLKLYQKVKELNCDPDYTK 262


>gi|328541884|ref|YP_004301993.1| Thioredoxin [polymorphum gilvum SL003B-26A1]
 gi|326411635|gb|ADZ68698.1| Thioredoxin [Polymorphum gilvum SL003B-26A1]
          Length = 334

 Score = 39.3 bits (91), Expect = 0.52,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 29/83 (34%), Gaps = 5/83 (6%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
                    ++ E+A   L  +++ +A ++F    +  P +    ++L   A      G 
Sbjct: 155 KAPGAAETEQLLEQADALLAAKDYGQAAQHFGAVLQMAPDS---VRALAGLARCYLGTGD 211

Query: 110 YQQAASLGEEYITQYPESKNVDY 132
             +A    E  +   P   +  Y
Sbjct: 212 AARARQALE--MVPEPGHADPAY 232


>gi|253701559|ref|YP_003022748.1| hypothetical protein GM21_2961 [Geobacter sp. M21]
 gi|251776409|gb|ACT18990.1| Tetratricopeptide domain protein [Geobacter sp. M21]
          Length = 635

 Score = 39.3 bits (91), Expect = 0.52,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 35/113 (30%), Gaps = 16/113 (14%)

Query: 146 RDVPYDQRATKLMLQY------MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
            + P D+   +           +    E Y  S  V  A   +    +     ++ IG  
Sbjct: 459 PEAPQDEEPARKDAAAPGLSQRLRDWEEIYPESEDVPEAELDIEELESH---YDLGIG-- 513

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAE-EAMARLVEAYVALALMDEAREVVS 251
           Y + G Y  AI  F +   N     H   + +      Y      D A +++ 
Sbjct: 514 YKEMGMYGGAIKEFDIAARN----PHRRLDCLTLQAICYREKGEADRAEDLLR 562


>gi|166367560|ref|YP_001659833.1| putative branched-chain amino acid transport system
           substrate-binding protein [Microcystis aeruginosa
           NIES-843]
 gi|166089933|dbj|BAG04641.1| putative branched-chain amino acid transport system
           substrate-binding protein [Microcystis aeruginosa
           NIES-843]
          Length = 870

 Score = 39.3 bits (91), Expect = 0.52,   Method: Composition-based stats.
 Identities = 22/175 (12%), Positives = 54/175 (30%), Gaps = 37/175 (21%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYL-----DSVTDVRYQREVYEKAVLFLKEQNFSKA 76
           F L++  ++++ +  G     +          + +     Q  + E+     K + + +A
Sbjct: 406 FILSLLVTLSILYWGGVFSDDASKYPEISLGEEILLKTNRQDNIIERGRQAFKNKEYKQA 465

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP----------E 126
            + F +     P              + Y+      A +  +    + P           
Sbjct: 466 IQLFKKSLDRLPNNP--------EIRIYYNN-----ARAAYQ---DRNPLKIATSVPLGN 509

Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
           +        L G++  Q   +   D++A      ++  +V    NSP    A+  
Sbjct: 510 NPETAQEI-LRGIALFQEELN---DEQAKNPDFHFLQVVVANDNNSP--VDAKDR 558


>gi|126654513|ref|XP_001388427.1| hypothetical protein [Cryptosporidium parvum Iowa II]
 gi|126117367|gb|EAZ51467.1| hypothetical protein cgd8_2120 [Cryptosporidium parvum Iowa II]
          Length = 514

 Score = 39.3 bits (91), Expect = 0.52,   Method: Composition-based stats.
 Identities = 18/152 (11%), Positives = 49/152 (32%), Gaps = 30/152 (19%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQ----CSR------------DFPFAGVARKSLLM 99
             +E+ +      K  N+S A E + +      +            +   + + +   L 
Sbjct: 30  SAKELKDAGNESYKGGNYSDAREKYEKGLELLEKIDQKDDEKEGFGEDEMSELRQSLQLN 89

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
            A +     ++ +A  +  + + +   SKNV    Y  G++               +   
Sbjct: 90  LAMIYVKIQEWSKAIQVTGQVLKKN--SKNVK-ALYRRGLARLGF--------GMYEESK 138

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
           +    +++   ++     A   + V R ++  
Sbjct: 139 EDFQNVLKLDPSN---ADAHRQLKVLRQKIQE 167


>gi|157164370|ref|YP_001466352.1| ADP-heptose-LPS heptosyltransferase II [Campylobacter concisus
           13826]
 gi|112800119|gb|EAT97463.1| TPR repeat-containing protein [Campylobacter concisus 13826]
          Length = 280

 Score = 39.3 bits (91), Expect = 0.52,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 48/147 (32%), Gaps = 19/147 (12%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
                +     S    +  +++    +  L   N ++A EYF   ++          S  
Sbjct: 148 NANPKQQNKPTSNFSGKSDKDILADGIKLLNSGNSTEAAEYFEYLNKK---GYKTGASNY 204

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKN-VDY---VYYLVGMSYAQMIRDVPYDQRA 154
               V YS   Y  A    ++ I     S++  DY   + Y   +S+ ++          
Sbjct: 205 YLGEVAYSQKSYSTAIQYYKKSIQ----SEDKADYTPKLLYHTAISFDKI--------GD 252

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFY 181
           T+   ++   +   Y +S   K A   
Sbjct: 253 TQSANRFYKALKVGYPDSKEAKAAPNR 279


>gi|308798761|ref|XP_003074160.1| anaphase promoting complex subunit 6/cell division cycle protein
           (IC) [Ostreococcus tauri]
 gi|55978030|gb|AAV68615.1| anaphase promoting complex subunit 6/cell division cycle protein
           16-like protein [Ostreococcus tauri]
 gi|116000332|emb|CAL50012.1| anaphase promoting complex subunit 6/cell division cycle protein
           (IC) [Ostreococcus tauri]
          Length = 620

 Score = 39.3 bits (91), Expect = 0.52,   Method: Composition-based stats.
 Identities = 17/123 (13%), Positives = 46/123 (37%), Gaps = 15/123 (12%)

Query: 60  VYEK-AVLFLKEQNFSKAYEYFNQCSRDFP---FAGVARKSLLMSAFVQYSAGKYQQAAS 115
           ++ +  VL  ++ N+ +A E F +     P    +      ++  A      G+Y +A +
Sbjct: 412 LFNEYGVLRYRQGNYEEAVENFERALDLAPKPVGSRW-ESLIVNLAQAFRKIGRYDEAIA 470

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
             +  +   P + +  Y      +++   ++    +  +  L ++Y  + +     S   
Sbjct: 471 TFQSALLISPRNAST-YA----ALAFTYQMKSRCSEPVSLGLAIEYYHKAL-----SLRA 520

Query: 176 KGA 178
             A
Sbjct: 521 DDA 523


>gi|1354207|gb|AAB82061.1| rof1 [Arabidopsis thaliana]
          Length = 551

 Score = 39.3 bits (91), Expect = 0.52,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 52/151 (34%), Gaps = 26/151 (17%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQ----CSRDFPFA-GVARKSL-------LMSAFVQYSAGK 109
           E+     K   +S A + + +       D  F+    +++        L  A  +     
Sbjct: 405 EEGNSKFKGGKYSLASKRYEKAVKFVEYDTSFSEEEKKQAKALKVACNLNDAACKLKLKD 464

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y+QA  L  + +    ES NV    Y    +Y ++  D+   +   K  L       E  
Sbjct: 465 YKQAEKLCTKVLEL--ESTNVK-ALYRRAQAYMELS-DLDLAEFDVKKAL-------EID 513

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
            N+  VK  +  +     +   KE    ++Y
Sbjct: 514 PNNREVKLEQKRLKEKMKEFNKKE---AKFY 541


>gi|27764882|ref|NP_060662.2| prolyl 3-hydroxylase 2 isoform a [Homo sapiens]
 gi|74714365|sp|Q8IVL5|P3H2_HUMAN RecName: Full=Prolyl 3-hydroxylase 2; AltName: Full=Leprecan-like
           protein 1; AltName: Full=Myxoid liposarcoma-associated
           protein 4; Flags: Precursor
 gi|27526730|emb|CAD23039.2| leprecan-like 1 protein [Homo sapiens]
 gi|119598515|gb|EAW78109.1| leprecan-like 1, isoform CRA_a [Homo sapiens]
 gi|193784998|dbj|BAG54151.1| unnamed protein product [Homo sapiens]
          Length = 708

 Score = 39.3 bits (91), Expect = 0.52,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 6/68 (8%)

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           F  Y  G+Y +A    + Y+  +P+ ++V     L  + Y + + D   D  A+    + 
Sbjct: 314 FAYYRVGEYVKALECAKAYLLCHPDDEDV-----LDNVDYYESLLDDSIDP-ASIEARED 367

Query: 162 MSRIVERY 169
           ++  V+R+
Sbjct: 368 LTMFVKRH 375


>gi|300871595|ref|YP_003786468.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000]
 gi|300689296|gb|ADK31967.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000]
          Length = 747

 Score = 39.3 bits (91), Expect = 0.53,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 66/191 (34%), Gaps = 58/191 (30%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM-------SAFVQYSAGKYQQ 112
           +Y K  L ++ + F  A +YF +          A++  +             ++ G Y +
Sbjct: 43  LY-KGQLCVEIKKFDDAIKYFEE----------AKRVDINTFKSYNLLGISYHAIGNYDK 91

Query: 113 AASLGEEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           A     E +   P+S    Y  Y L+G+SY +               ++  ++ +E    
Sbjct: 92  AIECFYETLKIIPKS----YTAYNLLGISYYKKNEH--------DKAIECFNKAIEINP- 138

Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
                          N LA        Y+ +   Y AAI  F+       +++  +E + 
Sbjct: 139 ---------KYDKAYNNLA-------LYHYRSKNYEAAINFFE-------NSKSMDEMLF 175

Query: 232 RLVEAYVALAL 242
              +AY  L +
Sbjct: 176 ---KAYDMLGM 183


>gi|257466264|ref|ZP_05630575.1| Tetratricopeptide TPR_2 repeat protein [Fusobacterium
           gonidiaformans ATCC 25563]
          Length = 185

 Score = 39.3 bits (91), Expect = 0.53,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 33/76 (43%), Gaps = 8/76 (10%)

Query: 70  EQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           ++++  A  +F +                   A+V Y   KY++A    E+ +   P S 
Sbjct: 51  KKDYDTAIYFFEKLMTLDATNGNWPGF----LAYVYYEQEKYKKAIPYFEKSVDLSPNSP 106

Query: 129 NVDYVYYLVGMSYAQM 144
            +   Y+L+G SY+++
Sbjct: 107 FI---YFLLGNSYSRL 119


>gi|255081975|ref|XP_002508206.1| PAF1 complex protein [Micromonas sp. RCC299]
 gi|226523482|gb|ACO69464.1| PAF1 complex protein [Micromonas sp. RCC299]
          Length = 1262

 Score = 39.3 bits (91), Expect = 0.53,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 31/77 (40%), Gaps = 5/77 (6%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            +  + + + N+  A   + Q  + F F  +  +  L  A   Y A   ++A    +  +
Sbjct: 832 NQGHIQMAKGNYVAAARNYEQAQQRFFFG-MDPRVALYQARNHYEANNMEEAKVTLKRAL 890

Query: 122 TQYP-ESK---NVDYVY 134
              P + +   N+ YVY
Sbjct: 891 HVAPWDHRLRFNLAYVY 907


>gi|154503155|ref|ZP_02040215.1| hypothetical protein RUMGNA_00979 [Ruminococcus gnavus ATCC 29149]
 gi|153796149|gb|EDN78569.1| hypothetical protein RUMGNA_00979 [Ruminococcus gnavus ATCC 29149]
          Length = 182

 Score = 39.3 bits (91), Expect = 0.53,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 27/99 (27%), Gaps = 22/99 (22%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           K A  +  +++ C L G                             +L++ N+ +A   F
Sbjct: 2   KRATLLALTVSACLLTGCTNALKD-------------------GTGYLEDGNYKEAVTAF 42

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            +   +        ++        Y    Y  A    E+
Sbjct: 43  QKAVDE---GKKTAEAYRGLGMAYYEQEDYASAKDAFEK 78


>gi|145525781|ref|XP_001448707.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124416262|emb|CAK81310.1| unnamed protein product [Paramecium tetraurelia]
          Length = 479

 Score = 39.3 bits (91), Expect = 0.53,   Method: Composition-based stats.
 Identities = 20/153 (13%), Positives = 40/153 (26%), Gaps = 30/153 (19%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL-MSAFVQYSAGK 109
           +++     ++ E      K  NF KA E +             R   L   AF       
Sbjct: 2   ISNSPEAEKLKELGNEQFKLSNFPKAIELYTAAVEKAAGNQ--RLVCLSNRAFAHIKMEN 59

Query: 110 YQQAASLGEE-------YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
           Y  A    +E       +I            YY  G +Y  + +         +   +  
Sbjct: 60  YGLAIIDADEILKEDSGFIK----------AYYRKGSAYLLLGKFDD-----ARKEFKRA 104

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
             + +           +  +   +  +  +E  
Sbjct: 105 DTLTQG-----KDADIQAKLKQIKQAIYEREFA 132


>gi|13324580|gb|AAK18793.1|AF305601_1 LMP1 [Borrelia burgdorferi]
          Length = 957

 Score = 39.3 bits (91), Expect = 0.53,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 44/220 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLG 117
           +  ++     NF ++ EY N       F   A+K    ++   +  ++   K +++    
Sbjct: 719 KAGIVSNNLGNFKQSEEYLNF------FNANAKKPNEIAIYNLSIAKFENNKLEESLETI 772

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYV 175
            + I   P  +  +Y  YL      +            +  +   S ++E+     S Y+
Sbjct: 773 NKAIDLNP--EKSEY-LYLKASINLKK--------ENYQNAISLYSLVIEKNPENTSAYI 821

Query: 176 KGARFYVTVGRNQLAAKEVE-------------IGRYYLKRGEYVAAIPRFQLVLANYSD 222
             A+ Y   G    A   +E             +G  Y K   Y  AI  F+  + N   
Sbjct: 822 NLAKAYEKSGNKSQAISTLEKIINKNNKLALNNLGILYKKEKNYQKAIEIFEKAIIN--- 878

Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQ 259
                EA   L    + +     A++++     ++   P+
Sbjct: 879 --SDIEAKYNLATTLIEINDNTRAKDLLREYTKLKPNNPE 916



 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 3/62 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y KA + LK++N+  A   ++      P       + +  A     +G   QA S  E+
Sbjct: 786 LYLKASINLKKENYQNAISLYSLVIEKNPEN---TSAYINLAKAYEKSGNKSQAISTLEK 842

Query: 120 YI 121
            I
Sbjct: 843 II 844



 Score = 35.5 bits (81), Expect = 9.0,   Method: Composition-based stats.
 Identities = 11/124 (8%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
            +   ++  D +  + +   A  +    +  KA   + +  +        ++       +
Sbjct: 570 NEFLKNNPNDAQASKTL---AQAYENNGDLLKAENAYEKIIKL----TNTQEDHYKLGII 622

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           ++   KY+ +    ++ I   P+ K      +  G++   + ++        K  ++   
Sbjct: 623 RFKLKKYEHSIESFDQTIKLDPKHKK---ALHNKGIALMMLNKN--------KKAIESFE 671

Query: 164 RIVE 167
           + ++
Sbjct: 672 KAIQ 675



 Score = 35.1 bits (80), Expect = 9.7,   Method: Composition-based stats.
 Identities = 39/279 (13%), Positives = 77/279 (27%), Gaps = 74/279 (26%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSR 85
           ++A  +    +   + + Y   +     Q + Y+  ++  K + +  + E F+   +   
Sbjct: 585 TLAQAYENNGDLLKAENAYEKIIKLTNTQEDHYKLGIIRFKLKKYEHSIESFDQTIKLDP 644

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
                   +K+L           K ++A    E+ I      KN    YY  G++  +  
Sbjct: 645 KH------KKALHNKGIALMMLNKNKKAIESFEKAIQI---DKNYGTAYYQKGIAEEKN- 694

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------------RFYVTVGR------ 186
                     +              N  Y   A               Y+          
Sbjct: 695 -------GDMQQAFASFKNAYNLDKNPNYALKAGIVSNNLGNFKQSEEYLNFFNANAKKP 747

Query: 187 NQLAAKEVEIGRY------------------------Y--------LKRGEYVAAIPRFQ 214
           N++A   + I ++                        Y        LK+  Y  AI  + 
Sbjct: 748 NEIAIYNLSIAKFENNKLEESLETINKAIDLNPEKSEYLYLKASINLKKENYQNAISLYS 807

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           LV+    +   A      L +AY       +A   +  I
Sbjct: 808 LVIEKNPENTSAY---INLAKAYEKSGNKSQAISTLEKI 843


>gi|77747992|ref|NP_639573.2| polysaccharide deacetylase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|77761345|ref|YP_245384.2| polysaccharide deacetylase [Xanthomonas campestris pv. campestris
           str. 8004]
          Length = 901

 Score = 39.3 bits (91), Expect = 0.53,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 39/126 (30%), Gaps = 18/126 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           E+ +   KE+ ++ A E F +  +  P    A  +     FV Y   +Y +AA   E  +
Sbjct: 792 ERGLQLYKEKRYADAAEQFAEALKLRP--DFA-LAANNLGFVYYRQERYAEAARWLENTL 848

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPY--DQRATKLMLQYMSRIVERYTNSPYVKGAR 179
              P             ++Y  +        D+   +        +          + AR
Sbjct: 849 KIDPS----------RAVAYLNLGDAYAKAGDREKARKAYTTYLALQ---PQGAGAEQAR 895

Query: 180 FYVTVG 185
             +   
Sbjct: 896 AQLQTL 901


>gi|310789734|gb|EFQ25267.1| tetratricopeptide [Glomerella graminicola M1.001]
          Length = 523

 Score = 39.3 bits (91), Expect = 0.53,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 32/101 (31%), Gaps = 18/101 (17%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A+       F +A + F + S          K L     +  + G++++A    +  I  
Sbjct: 13  ALGRYDNNEFDEALKDFEKISD-------TSKILFNMGVIHATLGEHEKAVECYQRAIKL 65

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
               + +   Y+  G+S   +           +  L   + 
Sbjct: 66  ---DQYLAVAYFQQGVSNFLL--------GDFEEALANFND 95


>gi|331221982|ref|XP_003323665.1| DnaJ and TPR domain-containing protein [Puccinia graminis f. sp.
           tritici CRL 75-36-700-3]
 gi|309302655|gb|EFP79246.1| DnaJ and TPR domain-containing protein [Puccinia graminis f. sp.
           tritici CRL 75-36-700-3]
          Length = 545

 Score = 39.3 bits (91), Expect = 0.53,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 24/72 (33%), Gaps = 4/72 (5%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D      +Y+KA   +       A +   +      F     K+ +  A +   +G Y+ 
Sbjct: 70  DPDDYLTLYKKATTQMSLGQNHHASQSLQKVLSLKDF----DKAQIQLARIHLKSGDYEA 125

Query: 113 AASLGEEYITQY 124
             +  E +   +
Sbjct: 126 CQTELESFRKNH 137


>gi|300870120|ref|YP_003784991.1| tetratricopeptide repeat-containing protein [Brachyspira pilosicoli
           95/1000]
 gi|300687819|gb|ADK30490.1| tetratricopeptide repeat family protein [Brachyspira pilosicoli
           95/1000]
          Length = 420

 Score = 39.3 bits (91), Expect = 0.53,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 74/229 (32%), Gaps = 59/229 (25%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
            ++++V +D + ++    +   K +       +++A +Y+++  +  P            
Sbjct: 82  DNNKEVDIDRLNNLTDYHDYNSKGIYKSANGEYAEAIKYYDEAIKLNP----------NM 131

Query: 101 AFVQY-------SAGKYQQAASLGEEYITQYPESKNVD--YVYYLVGMSYAQMIRDVPYD 151
           A   Y         G  ++A    ++ I         D  Y YY  G+        +  D
Sbjct: 132 ADAYYNKAIAKTKLGLLKEAIEEYDKAIEL-----RADYTYAYYNRGL--------LKSD 178

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA-AKEVEIGRYYLKRGEYVAAI 210
               +  ++   + +    N   +  A     +  ++L  +KE               AI
Sbjct: 179 LGLLEEAIKDFDKALSIDPN---LFDAYNNKGLLEDELGFSKE---------------AI 220

Query: 211 PRFQLVLANYSDAEHAEEAMAR--LVEAYVALALMDEA-REVVSLIQER 256
             F   +    +      A+A      A   L L +EA ++    I+  
Sbjct: 221 KDFNKAIKLNPNY-----ALAYNNRGTAKDNLGLYEEAIKDYNKAIKLN 264



 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 20/158 (12%), Positives = 49/158 (31%), Gaps = 17/158 (10%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
           +G   ++ +D       +  Y      +         + +A E F++  +  P       
Sbjct: 247 LGLYEEAIKDYNKAIKLNPNYALAYNNRGNAKDNLGLYEEAIEDFDKAIKLKPDN---TD 303

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +       +Y+   Y++A    ++ I   P   N  + Y   G +   +           
Sbjct: 304 AYNNRGNAKYNLELYEEAIKDYDKTIKLNP---NYAFAYNNRGNAKDNL--------GLY 352

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
           +  ++   + ++   +  YV  A       +  L   E
Sbjct: 353 EEAIEDFDKAIKLNPD--YV-DAYNNRGFTKENLGLYE 387


>gi|260769475|ref|ZP_05878408.1| TPR domain protein in aerotolerance operon [Vibrio furnissii CIP
           102972]
 gi|260614813|gb|EEX39999.1| TPR domain protein in aerotolerance operon [Vibrio furnissii CIP
           102972]
          Length = 647

 Score = 39.3 bits (91), Expect = 0.53,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 33/86 (38%), Gaps = 17/86 (19%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCS----RDF----------PFAGVAR---KSLLMSAFVQ 104
           ++A+   +++++  A E F          +           F+ VA    ++    A   
Sbjct: 349 QQAMQAFEQKDYQHAAEQFTDPQWQGIARYEAKDYQGAIDAFSQVAAPDSRTQYNLANAY 408

Query: 105 YSAGKYQQAASLGEEYITQYPESKNV 130
             AG+ +QA    ++ +   P++ + 
Sbjct: 409 AQAGQLEQARDRYQQLLQTDPDNADA 434


>gi|255084906|ref|XP_002504884.1| predicted protein [Micromonas sp. RCC299]
 gi|226520153|gb|ACO66142.1| predicted protein [Micromonas sp. RCC299]
          Length = 1072

 Score = 39.3 bits (91), Expect = 0.53,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 25/69 (36%), Gaps = 3/69 (4%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++A L++      +A E F       P      +  +  A + Y  G    A S  +E +
Sbjct: 337 DQARLYVDIGEPKRALEQFQNLRERIPDNP---EVAVELAKMHYQMGNPDLAESTLDELM 393

Query: 122 TQYPESKNV 130
             +P   + 
Sbjct: 394 AAHPTRADA 402


>gi|148508298|gb|ABQ76082.1| tetratricopeptide repeat protein [uncultured haloarchaeon]
          Length = 248

 Score = 39.3 bits (91), Expect = 0.53,   Method: Composition-based stats.
 Identities = 12/106 (11%), Positives = 32/106 (30%), Gaps = 11/106 (10%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            K     + + + +A   + +  R    +  A  +    A+  + AG+ + A    E  +
Sbjct: 107 NKGAAHGQLEEWDEAIGSYKEALRIDDESEHAASAETNLAYALWEAGEAESALQHAERAV 166

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
              P        +Y  G           +++   +  +      + 
Sbjct: 167 KVDPRFPQ---AWYNRG--------FFLHERGLNEEAVSAFDNAIR 201


>gi|150377245|ref|YP_001313840.1| TPR repeat-containing protein [Sinorhizobium medicae WSM419]
 gi|150031792|gb|ABR63907.1| Tetratricopeptide TPR_2 repeat protein [Sinorhizobium medicae
           WSM419]
          Length = 175

 Score = 39.3 bits (91), Expect = 0.53,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 47/139 (33%), Gaps = 10/139 (7%)

Query: 6   GRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDS-VTDVRYQREVYEKA 64
           GR +        +  + AL I  ++ +      E  SS DV   S VT     R   ++ 
Sbjct: 9   GRMVLCRPRGTRRTTELALAIVSAVLLSSCQTSEVLSSADVDPTSAVTGGDVSRSDLDQG 68

Query: 65  VLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
            L     N+  A ++F               ++L+  A      G++  A     + +  
Sbjct: 69  KLQFMNGNYGLAEKHFREAVELR----RDNAEALMGLAACYDRLGRFDLADRTYSQLLKV 124

Query: 124 YPESK----NVDYVYYLVG 138
                    N+ Y +YL G
Sbjct: 125 AGRQPRIVNNMGYSHYLRG 143


>gi|116749963|ref|YP_846650.1| TPR repeat-containing serine/threonin protein kinase
           [Syntrophobacter fumaroxidans MPOB]
 gi|116699027|gb|ABK18215.1| serine/threonine protein kinase with TPR repeats [Syntrophobacter
           fumaroxidans MPOB]
          Length = 850

 Score = 39.3 bits (91), Expect = 0.53,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 28/100 (28%), Gaps = 4/100 (4%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           + R     +    +FL + ++  A  ++  C    P      + L              Q
Sbjct: 573 NNRAAEVYFNMGFIFLMQGDYDAAMTHYEACRALNP--PYQDEVLTNLGMCHLKKKNPAQ 630

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           A  L  + +   P +       YL G+           D 
Sbjct: 631 ALELFRQALDLNPSNSVAK--SYLAGLPAPTQDASPGQDP 668


>gi|325268976|ref|ZP_08135597.1| hypothetical protein HMPREF9141_0806 [Prevotella multiformis DSM
           16608]
 gi|324988597|gb|EGC20559.1| hypothetical protein HMPREF9141_0806 [Prevotella multiformis DSM
           16608]
          Length = 852

 Score = 39.3 bits (91), Expect = 0.54,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 31/101 (30%), Gaps = 18/101 (17%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
           +CFL+      S  +   +  DV    ++Y       ++ N+ +A   + +  +      
Sbjct: 608 LCFLLVCLSVCSLQLSAQTKADV---DKMY-------QKGNYQQAVRGYEKLLKQ----- 652

Query: 92  VARKSLL--MSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
               + L        Y       A    E      P  +++
Sbjct: 653 -GESAALYYNLGNSYYRLDNIPHAVLSYERAQLLAPSDEDI 692


>gi|289548108|ref|YP_003473096.1| peptidase M48 Ste24p [Thermocrinis albus DSM 14484]
 gi|289181725|gb|ADC88969.1| peptidase M48 Ste24p [Thermocrinis albus DSM 14484]
          Length = 416

 Score = 39.3 bits (91), Expect = 0.54,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 43/148 (29%), Gaps = 31/148 (20%)

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
            Y  G  + A    E  I  Y  +  +  VY   GM  A+M R         K  L Y+ 
Sbjct: 273 YYQKGDLRTALLYMERAIRLYDRN-YMARVY--AGMILARMGRG--------KDALSYVE 321

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
           R                      N      + I   Y +   Y+    R + ++ +Y D 
Sbjct: 322 RAYREMPQ-----------VFSTNYAYGYVLFITGDYPRSVNYL---RRARDLIPSYPDT 367

Query: 224 EHAEEAMARLVEAYVALALMDEAREVVS 251
                    L   Y A+   + A E   
Sbjct: 368 Y------YYLGRCYEAMGDSERAVENYR 389


>gi|284055012|ref|ZP_06385222.1| tetratricopeptide TPR_2 [Arthrospira platensis str. Paraca]
          Length = 352

 Score = 39.3 bits (91), Expect = 0.54,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 43/115 (37%), Gaps = 21/115 (18%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARK-SLLMSAFVQYSAGKYQQAASLG 117
           Y +         + +A   +++ ++  P F      + +LLMS       G++++A    
Sbjct: 255 YGRGNALSSLSQYDEAIASYDRATQLQPNFHPAWRDRGALLMSI------GRHEEALQAF 308

Query: 118 EEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           +  +   P+    DY ++YL G      + D P          +  +R +    +
Sbjct: 309 DRLLQIQPD----DYGIWYLRGNILMNHLDDYP-------EAAKSYTRAINIKPD 352


>gi|251789345|ref|YP_003004066.1| tetratricopeptide repeat-containing protein [Dickeya zeae Ech1591]
 gi|247537966|gb|ACT06587.1| Tetratricopeptide domain protein [Dickeya zeae Ech1591]
          Length = 389

 Score = 39.3 bits (91), Expect = 0.54,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 60/184 (32%), Gaps = 34/184 (18%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              ++    + +A E F Q   +  F   A +  L+      S   +  A    E+ +  
Sbjct: 114 GRDYMVAGLYDRAEEIFKQLVDEEDFRVSALQ-QLLQI--HQSTSDWPNAIDTAEKLVKL 170

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
                         G +  Q+  ++ +     +  LQ M         S  +  A   + 
Sbjct: 171 --------------GKT--QLRSEIAHF--YCEQALQAM--------GSDDLDKAVAMLK 204

Query: 184 VGR---NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
                 +Q A   + +GR Y+ +  Y  A+   Q VL    D E   E +  L E Y  L
Sbjct: 205 KASATDSQCARVSIMLGRIYMAQQNYPQAVAMLQQVLD--QDTELVSETLPLLQECYRYL 262

Query: 241 ALMD 244
              +
Sbjct: 263 QQPE 266


>gi|261420507|ref|YP_003254189.1| hypothetical protein GYMC61_3150 [Geobacillus sp. Y412MC61]
 gi|319768176|ref|YP_004133677.1| hypothetical protein GYMC52_3178 [Geobacillus sp. Y412MC52]
 gi|261376964|gb|ACX79707.1| Tetratricopeptide TPR_2 repeat protein [Geobacillus sp. Y412MC61]
 gi|317113042|gb|ADU95534.1| Tetratricopeptide repeat protein [Geobacillus sp. Y412MC52]
          Length = 490

 Score = 39.3 bits (91), Expect = 0.54,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 37/100 (37%), Gaps = 15/100 (15%)

Query: 48  LDSVTDVRYQREVY---EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAF 102
           LD       + ++    ++A   L+E+ F++A E        +P  ++          A 
Sbjct: 138 LDGSEWTEEEEQLMVLEDRARRLLEEERFAEAIEALEALVARYPDVWSAHN-----NLAL 192

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNV-----DYVYYLV 137
             + +G   +A     E + + P + +       + YYL 
Sbjct: 193 AYFYSGDVDKAKQKVREVLKRDPGNLHALCNALVFAYYLR 232


>gi|162454435|ref|YP_001616802.1| exported transglycosylase [Sorangium cellulosum 'So ce 56']
 gi|161165017|emb|CAN96322.1| exported transglycosylase [Sorangium cellulosum 'So ce 56']
          Length = 773

 Score = 39.3 bits (91), Expect = 0.54,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 34/89 (38%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
              R   +++  A    + +  ++A E     +R F        S L++A +    G+Y 
Sbjct: 334 PSARQAEQLHLAARSLSRLRREAEAIERHLAVARRFRKTRWGELSSLLAARLLMQVGRYA 393

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMS 140
           +A +    ++  YP S       Y   ++
Sbjct: 394 EAVAQYGRFLDAYPRSDRRGDAAYERALA 422


>gi|145512772|ref|XP_001442298.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124409633|emb|CAK74901.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1421

 Score = 39.3 bits (91), Expect = 0.54,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 55/158 (34%), Gaps = 31/158 (19%)

Query: 60   VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
             Y     +   + F +A E F +  ++ P       +    A   +    Y+ AA   E+
Sbjct: 1277 YYNLGDTYFTMEKFEEALECFEKVVKNDPQHS---AAFYNYANTFFVLEDYENAAKYFEK 1333

Query: 120  YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
             I   P+  NVD+  Y+  +     I+    +Q       +++   +    N+P      
Sbjct: 1334 AIELQPQ--NVDWRNYVAQL----YIKKCDLNQ-----AKRHLDESIRLQPNNP------ 1376

Query: 180  FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
                   + LA        YY + G Y  A+ + +  L
Sbjct: 1377 -------DTLAKY----ANYYYQIGNYQEALQKAKQTL 1403



 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 30/67 (44%), Gaps = 2/67 (2%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++  A  + + Q+F++A  Y+ +  +    +    K+    A     AG+ QQA  + ++
Sbjct: 121 LFNIASTYYEMQDFTQAIIYYQKLIQVNKVSDY--KAYFNLAMCYEKAGENQQALEMYKQ 178

Query: 120 YITQYPE 126
            I   P 
Sbjct: 179 SIRINPN 185



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 31/92 (33%), Gaps = 11/92 (11%)

Query: 53   DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK--SLLMSAFVQYSAGKY 110
            D ++    Y  A  F   +++  A +YF +     P     R   + L            
Sbjct: 1304 DPQHSAAFYNYANTFFVLEDYENAAKYFEKAIELQPQNVDWRNYVAQL-----YIKKCDL 1358

Query: 111  QQAASLGEEYITQYPESKN--VDYV--YYLVG 138
             QA    +E I   P + +    Y   YY +G
Sbjct: 1359 NQAKRHLDESIRLQPNNPDTLAKYANYYYQIG 1390



 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 23/202 (11%), Positives = 61/202 (30%), Gaps = 40/202 (19%)

Query: 72   NFSKAYEYFNQCSRDFPFAGVARKSLLMS--AFVQYSAGKYQQAASLGEEYITQYPESKN 129
             F +A + + +       + + +   L    A   Y    +++A    +  ++    S  
Sbjct: 1222 QFEQAIQIYEEI------SHLDQNEELEQHMANCYYKKNDFEEAVLHYQRALSIN--SDK 1273

Query: 130  VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS--------------PYV 175
            ++  YY +G +Y  M +         +  L+   ++V+                      
Sbjct: 1274 IE-CYYNLGDTYFTMEK--------FEEALECFEKVVKNDPQHSAAFYNYANTFFVLEDY 1324

Query: 176  KGARFYVTVGRNQLAAK---EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
            + A  Y                 + + Y+K+ +   A       +    +     + +A+
Sbjct: 1325 ENAAKYFEKAIELQPQNVDWRNYVAQLYIKKCDLNQAKRHLDESIRLQPN---NPDTLAK 1381

Query: 233  LVEAYVALALMDEA-REVVSLI 253
                Y  +    EA ++    +
Sbjct: 1382 YANYYYQIGNYQEALQKAKQTL 1403


>gi|116283802|gb|AAH30849.1| Ttc38 protein [Mus musculus]
          Length = 475

 Score = 39.3 bits (91), Expect = 0.54,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 43/123 (34%), Gaps = 19/123 (15%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA---- 101
           V L     +  + +++  AV    + NF +A + + Q  RD P          M A    
Sbjct: 112 VELSQTQTLTPREQLHVSAVEMFAKGNFPRACDLWEQILRDHPTD--------MLALKFS 163

Query: 102 -FVQYSAGKYQQAASLGEEYITQYPE-SKNVDYVYYLVGMSYAQMIRDVPYD--QRATKL 157
               +  G  +Q           YP  + ++    Y+ G+    ++    YD  Q+  K 
Sbjct: 164 HDAYFYLGYQEQMRDSVAR---VYPFWTPDIPLNSYVKGIYSFGLMETNFYDQAQKLAKE 220

Query: 158 MLQ 160
            L 
Sbjct: 221 ALS 223


>gi|325180731|emb|CCA15138.1| cell division cycle protein 16 putative [Albugo laibachii Nc14]
          Length = 768

 Score = 39.3 bits (91), Expect = 0.54,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 21/56 (37%), Gaps = 3/56 (5%)

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE---AMARLVEAYVALALMDEAR 247
           EIG  Y K+  Y +A+   Q  L    +    +     +  L  AY  L    EA 
Sbjct: 623 EIGVVYYKQKRYTSAVESLQEALQACPNTASKQTFSVTLFNLASAYRKLGRYQEAE 678


>gi|301607764|ref|XP_002933468.1| PREDICTED: TPR and ankyrin repeat-containing protein 1-like
           [Xenopus (Silurana) tropicalis]
          Length = 2877

 Score = 39.3 bits (91), Expect = 0.54,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 27/76 (35%), Gaps = 7/76 (9%)

Query: 73  FSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           +  A  + +Q      F      ++L    A   +   K+ +A       I      +N+
Sbjct: 39  YDDAIGFLSQIVHLGNFQK--ELAILWCNRANALFKLEKWDEALISATRSIRLN--HRNI 94

Query: 131 DYVYYLVGMSYAQMIR 146
              YY  G+S+ ++  
Sbjct: 95  K-AYYRSGISFIKLHD 109


>gi|300871488|ref|YP_003786361.1| hypothetical protein BP951000_1881 [Brachyspira pilosicoli 95/1000]
 gi|300689189|gb|ADK31860.1| hypothetical protein BP951000_1881 [Brachyspira pilosicoli 95/1000]
          Length = 1158

 Score = 39.3 bits (91), Expect = 0.54,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 68/212 (32%), Gaps = 41/212 (19%)

Query: 64   AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA--FVQYSA--GKYQQAAS-LGE 118
            A   L + +F  A + F +    +          L S   +  Y A    Y +A   L  
Sbjct: 835  AKYLLDKDDFYGARKLFEKLLAKYTNN-------LESIVGYADYEARLKHYDRAKEILIN 887

Query: 119  EYITQYPESK-NV--DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
              +  Y  +  NV  +YVY ++G  Y  +        +     +      +E+  NS Y 
Sbjct: 888  SALPLYTSNPYNVGEEYVYNMLGQIYYNL--------KEYGSAINNFKLALEK--NSLY- 936

Query: 176  KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY-SDAEHAEEAMARLV 234
              A F +                Y+ +  +Y  A   +++   N   D    ++ +  L 
Sbjct: 937  PDANFNLANL-------------YFYQDNDYKKAKEHYKIAYDNLAPDLRS-DQLLYNLS 982

Query: 235  EAYVALALMDEAREVVSLIQERYPQGYWARYV 266
              Y      D A +  + +  + P      Y 
Sbjct: 983  WLYYLDGEYDLAFQGFNDLFYKNPDNSIVSYA 1014


>gi|206603160|gb|EDZ39640.1| Protein of unknown function [Leptospirillum sp. Group II '5-way
           CG']
          Length = 719

 Score = 39.3 bits (91), Expect = 0.54,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 46/129 (35%), Gaps = 13/129 (10%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           +YE+A + L +    +A  +          +P+         ++ +     G +++A +L
Sbjct: 216 LYERARIALDQDRVPEAGSFLTRALALDGVYPY-KHPEDLFTLALYAD-RKGHHRRAFAL 273

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
             E+     ES  V    Y +G+   ++           + M   +  +V  Y  + +  
Sbjct: 274 YREFRRFGSESPLVPEALYRMGILSGKL--------GKPRSMEARLLEVVHEYPTTRWAD 325

Query: 177 GARFYVTVG 185
            AR  +   
Sbjct: 326 RARLEIARL 334


>gi|198414401|ref|XP_002127526.1| PREDICTED: similar to Serine/threonine-protein phosphatase 5 (PP5)
           (Protein phosphatase T) (PP-T) (PPT) [Ciona
           intestinalis]
          Length = 492

 Score = 39.3 bits (91), Expect = 0.54,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 46/153 (30%), Gaps = 35/153 (22%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGK 109
           +D     +  E+A    K++ + +A + + +     P +    A +S     F       
Sbjct: 15  SDRLKAEKFKEEANHLFKDKKYEEAIDLYTKAIEVNPKSAVYHANRS-----FANLRLEN 69

Query: 110 YQQAASLG-------EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
           Y  A           ++YI            YY    +Y  +           KL L+ +
Sbjct: 70  YGFALEDATTAISCDKKYIK----------AYYRRASAYMSL--------GKFKLALRDL 111

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
             IV+          AR   T     +  K  E
Sbjct: 112 EAIVKVRPTDK---DARMKYTACSKIVKQKAFE 141


>gi|170078306|ref|YP_001734944.1| TPR repeat-containing protein [Synechococcus sp. PCC 7002]
 gi|169885975|gb|ACA99688.1| TPR-repeat containing protein [Synechococcus sp. PCC 7002]
          Length = 577

 Score = 39.3 bits (91), Expect = 0.54,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 39/112 (34%), Gaps = 14/112 (12%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
               + DV+     D  Y  + Y +A+      ++ +A    N+  + +  +     S  
Sbjct: 466 SLDPNDDVFYRLRGDSYYCLKKYSEAIE-----DYGEAIR-LNKLIKLYLNSEYHNCSGY 519

Query: 99  --MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
             M     Y   KY +A    E  +   P+++N  Y      +     I+ +
Sbjct: 520 YNMRGVACYRLEKYTEALQDFENALRLNPQNQNSIY------LDNKNQIKKI 565



 Score = 36.6 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 7/78 (8%)

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY-LVGMSYAQMIRDVPYDQRATK 156
           L      Y  GKY+ A +   + I+  P     D V+Y L G SY  + +          
Sbjct: 442 LDLGLTHYDMGKYEFAITDFSKAISLDPN----DDVFYRLRGDSYYCLKKYSEAI-EDYG 496

Query: 157 LMLQYMSRIVERYTNSPY 174
             ++ ++++++ Y NS Y
Sbjct: 497 EAIR-LNKLIKLYLNSEY 513


>gi|78223197|ref|YP_384944.1| hypothetical protein Gmet_1990 [Geobacter metallireducens GS-15]
 gi|78194452|gb|ABB32219.1| conserved hypothetical protein [Geobacter metallireducens GS-15]
          Length = 175

 Score = 39.3 bits (91), Expect = 0.54,   Method: Composition-based stats.
 Identities = 8/57 (14%), Positives = 23/57 (40%), Gaps = 4/57 (7%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFL----KEQNFSKAYEYFNQCSRDFPFAGVARKS 96
            +V             ++  A+L +      ++ + A +Y  +  +++P +  A +S
Sbjct: 58  EEVVAAQGVRGITDEALFRLALLSMPSDLNREDLANAVKYLERLQKEYPVSPWATQS 114


>gi|251772450|gb|EES53017.1| putative TPR-domain containing protein [Leptospirillum
           ferrodiazotrophum]
          Length = 724

 Score = 39.3 bits (91), Expect = 0.55,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 63/226 (27%), Gaps = 33/226 (14%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           R               ++      ++++   +      +   + P +  + ++LL  A  
Sbjct: 145 RQAEKAPPPGWDKGEVLFRMGQYLVRKRFGVEGRGLLERLRSENPQSPWSYRALLSIADS 204

Query: 104 QYSAGKYQQA-----ASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATK 156
               G   +A      +  E +    P SK+ D +   YL G  + ++ R    D     
Sbjct: 205 YREKGDLPRAEKRLLMADPERFPV--PVSKD-DRLRWLYLAG--HLKLDRG---DILGAG 256

Query: 157 LMLQYMSRIVERYTNSPYV-KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
                   +   Y    Y    A                 +GRY  +    + A+  F+ 
Sbjct: 257 EDFLAALSLSHDYP---YAHPEAL--------------FLLGRYAYRAHHDLRAVTLFRR 299

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            +  + +      AM         L   D  +  +  +    P   
Sbjct: 300 FIRLFPNDSRLSLAMYYRARLSGRLGHPDREKGRLRELTMDEPGTP 345


>gi|260825355|ref|XP_002607632.1| hypothetical protein BRAFLDRAFT_84679 [Branchiostoma floridae]
 gi|229292980|gb|EEN63642.1| hypothetical protein BRAFLDRAFT_84679 [Branchiostoma floridae]
          Length = 519

 Score = 39.3 bits (91), Expect = 0.55,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 29/74 (39%), Gaps = 4/74 (5%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDF---PFAGVARKSLLM-SAFVQYSAGKYQQAASL 116
           +E  +L   +Q+F     +  +    F   P +   + ++L   A+  Y     ++A   
Sbjct: 180 FEVGLLAYNDQDFYHVALWMEESLARFQPDPTSEHTKDAILDHLAYASYRLNNIERAYQA 239

Query: 117 GEEYITQYPESKNV 130
            +E +   PE  N 
Sbjct: 240 TKELLRVNPEHSNA 253


>gi|149277323|ref|ZP_01883465.1| hypothetical protein PBAL39_10546 [Pedobacter sp. BAL39]
 gi|149232200|gb|EDM37577.1| hypothetical protein PBAL39_10546 [Pedobacter sp. BAL39]
          Length = 268

 Score = 39.3 bits (91), Expect = 0.55,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 4/75 (5%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           + +G + +K G++  AI RFQ ++        + +A   L  AY  L    EA E     
Sbjct: 189 MSLGTFAMKSGQFDKAIVRFQDIIKIKP----SPDAYFYLATAYENLGKDAEAIEAYEKS 244

Query: 254 QERYPQGYWARYVET 268
           ++       +++V+ 
Sbjct: 245 KKLAANATLSKFVDD 259


>gi|84996545|ref|XP_952994.1| transcription factor [Theileria annulata strain Ankara]
 gi|65303990|emb|CAI76369.1| transcription factor, putative [Theileria annulata]
          Length = 882

 Score = 39.3 bits (91), Expect = 0.55,   Method: Composition-based stats.
 Identities = 10/71 (14%), Positives = 25/71 (35%), Gaps = 7/71 (9%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI-- 121
             +  +  N  +A   F +C R+     +  +++   A        Y+ A    + ++  
Sbjct: 146 GEMSQESGNLDQAIYCFKKCQRNQE-GQINEQAVFALAICYIEKKDYENA---AKRFLVL 201

Query: 122 -TQYPESKNVD 131
              +P  K + 
Sbjct: 202 FNLHPNDKLIA 212


>gi|89094849|ref|ZP_01167782.1| Peptidase family M48 family protein [Oceanospirillum sp. MED92]
 gi|89080904|gb|EAR60143.1| Peptidase family M48 family protein [Oceanospirillum sp. MED92]
          Length = 478

 Score = 39.3 bits (91), Expect = 0.55,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 33/79 (41%), Gaps = 6/79 (7%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           KA + + + N+S A +  ++  + +P    A       A       +  +A+ + E+ + 
Sbjct: 341 KAEIAMAQMNYSSAVKTLSKLMQVYP-GNHA--VSFTYADALLKMEQPSKASQVYEDLVE 397

Query: 123 QYPESKNVDYVYYLVGMSY 141
           + P        +YL+  SY
Sbjct: 398 RNPNDSR---AWYLLAESY 413


>gi|284036927|ref|YP_003386857.1| hypothetical protein Slin_2013 [Spirosoma linguale DSM 74]
 gi|283816220|gb|ADB38058.1| hypothetical protein Slin_2013 [Spirosoma linguale DSM 74]
          Length = 597

 Score = 39.3 bits (91), Expect = 0.55,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 47/110 (42%), Gaps = 5/110 (4%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
           F  +    LV      S+ V+    +D    ++ Y+ A+  ++  ++ +A    N   + 
Sbjct: 5   FLLLTRTVLVCCGLLCSQLVWAQLTSD---AQKRYKAALELVRTGDYERAKSDLNVLIQQ 61

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
                +A  +    A   +   KY Q+ ++ ++ + QYP+ + +D   YL
Sbjct: 62  R--GPLAPYAAYHYAIAAFRQRKYPQSRAMLKQLMEQYPDWQKMDDANYL 109


>gi|289207813|ref|YP_003459879.1| peptidase M48 Ste24p [Thioalkalivibrio sp. K90mix]
 gi|288943444|gb|ADC71143.1| peptidase M48 Ste24p [Thioalkalivibrio sp. K90mix]
          Length = 480

 Score = 39.3 bits (91), Expect = 0.55,   Method: Composition-based stats.
 Identities = 25/181 (13%), Positives = 51/181 (28%), Gaps = 26/181 (14%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
           +   R + +          ++Y   V  L+     +A E   +          A    L 
Sbjct: 284 KDPRRAIEIHRGASDPAPHQIYGAMVAHLERGELDRAAERLEEIPV-----EEAPGMTLE 338

Query: 100 SAFVQY--SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
            A        G ++ A  +  +    YP    +  V                 D      
Sbjct: 339 LARGALERERGNHEAALEILNDLDAVYPGHPVIREVL-----------ARAHRDLDNPDR 387

Query: 158 MLQYMSRIV--ERYTNSP------YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
            ++ ++ ++  ER  N         +     Y+ + R  +A       +Y     ++ AA
Sbjct: 388 AIRIVNEMIRNERAPNPELLRLKADIADGAGYIAISREAMAEYFFHRAQYEESVRQFEAA 447

Query: 210 I 210
           I
Sbjct: 448 I 448


>gi|189183138|ref|YP_001936923.1| TPR repeat-containing protein 03 [Orientia tsutsugamushi str.
           Ikeda]
 gi|189179909|dbj|BAG39689.1| TPR repeat-containing protein 03 [Orientia tsutsugamushi str.
           Ikeda]
          Length = 502

 Score = 39.3 bits (91), Expect = 0.55,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 59/186 (31%), Gaps = 37/186 (19%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
               Y K     + + + +A E F+   +   +     K+ L      Y   +YQ+A   
Sbjct: 314 PDTYYNKGACLYELRQYQEAVENFDLAIK---YNPNFEKAYLSKGACLYELRQYQEAIEC 370

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
               I   P        YY  G+   ++ +         +  ++     ++   N  YV 
Sbjct: 371 CNLAIKYNPND---AEAYYNKGVCLFKLGQH--------QAAVENYDLAIKYNPN--YV- 416

Query: 177 GARFYVTVGRNQLAAKEVEIGRY-------------YLKRG-------EYVAAIPRFQLV 216
            A +   +  ++L   +  +  +             Y  +G       +Y AAI  F L 
Sbjct: 417 DAYYNKGLCLSKLGQAQEAVENFNLAIKYNPNDAEAYYNKGLCLYELRQYQAAIANFDLA 476

Query: 217 LANYSD 222
           +    +
Sbjct: 477 IKYDPN 482



 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 33/123 (26%), Gaps = 28/123 (22%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG----KYQQ 112
               Y K V   K      A E ++   +  P                Y+ G    K  Q
Sbjct: 382 AEAYYNKGVCLFKLGQHQAAVENYDLAIKYNP----------NYVDAYYNKGLCLSKLGQ 431

Query: 113 AASLGEEY---ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           A    E +   I   P        YY  G+   ++        R  +  +      ++  
Sbjct: 432 AQEAVENFNLAIKYNPND---AEAYYNKGLCLYEL--------RQYQAAIANFDLAIKYD 480

Query: 170 TNS 172
            N+
Sbjct: 481 PNN 483


>gi|307210931|gb|EFN87246.1| Tetratricopeptide repeat protein 26 [Harpegnathos saltator]
          Length = 1038

 Score = 39.3 bits (91), Expect = 0.55,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 46/150 (30%), Gaps = 28/150 (18%)

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS----PYVKGARFYVTVGRNQLA 190
           Y   ++  + ++   Y     +  L      +  Y  S         ++    +    LA
Sbjct: 534 YKRAVTVYENLKKRDYVPPDVRTNLACCYFYLGMYPESQKILEEAADSKLRTRLLF-HLA 592

Query: 191 AK--------------------EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
            K                    ++ +   +  R  Y  AI  ++ +L +  D        
Sbjct: 593 HKMGNESKLKEYHQMLQDVIEDQLSLASIHYLRAHYQEAIDVYKRILLDNRDYLALN--- 649

Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQG 260
             +   Y  L   D A+EV+ +  ++YP  
Sbjct: 650 VYVALCYYKLDYYDVAQEVLQVYLQKYPDS 679


>gi|301759032|ref|XP_002915381.1| PREDICTED: prolyl 4-hydroxylase subunit alpha-3-like [Ailuropoda
           melanoleuca]
          Length = 539

 Score = 39.3 bits (91), Expect = 0.55,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 19/131 (14%)

Query: 11  IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKE 70
           + + +   +   A  +F  +A   +         D+Y           + ++   +    
Sbjct: 138 LQDVYMLNVKGLARGVFQRVAGSAVT--------DLYSPRRLFSLTADDCFQVGKVAYDM 189

Query: 71  QNFSKAYEYFNQCSRDF--PFAGVA-------RKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            ++  A  +  +    F   +             +L   AF  + AG    A SL  E++
Sbjct: 190 GDYYHAIPWLEEAVSLFRGSYGEWKTEDEASLEDALDHLAFAYFQAGNVSCALSLSREFL 249

Query: 122 TQY-PESKNVD 131
             Y P++K + 
Sbjct: 250 -LYSPDNKRMA 259


>gi|194386088|dbj|BAG59608.1| unnamed protein product [Homo sapiens]
          Length = 482

 Score = 39.3 bits (91), Expect = 0.55,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 30/101 (29%), Gaps = 15/101 (14%)

Query: 104 QYSAGKYQQAASLGEEYITQYP------ESKNVDYVYYLVGMSYAQMIRDVPYD---QRA 154
            + A  Y+ A     + I   P       ++++    YL    Y   + D        + 
Sbjct: 38  YFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLA---YLRTECYGNALGDATRAIELDKK 94

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
            +  L+    +V+   +      A+         +  K  E
Sbjct: 95  FRAALRDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 132


>gi|187956968|gb|AAI57956.1| Cdc27 protein [Mus musculus]
 gi|219521189|gb|AAI72100.1| Cdc27 protein [Mus musculus]
          Length = 830

 Score = 39.3 bits (91), Expect = 0.55,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 592 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 641

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178
           N    +Y +GM Y +  +     +   +  L    +          +      S      
Sbjct: 642 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 697

Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                V   +N L               +Y +A+   + +                + + 
Sbjct: 698 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 752

Query: 237 YVALALMDEA 246
           Y  L     A
Sbjct: 753 YKKLGQTHLA 762


>gi|124024560|ref|YP_001018867.1| hypothetical protein P9303_28721 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964846|gb|ABM79602.1| Hypothetical protein P9303_28721 [Prochlorococcus marinus str. MIT
           9303]
          Length = 706

 Score = 39.3 bits (91), Expect = 0.55,   Method: Composition-based stats.
 Identities = 12/113 (10%), Positives = 32/113 (28%), Gaps = 20/113 (17%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
            +     + +++  A   +N+         +    R         + + G YQ A +   
Sbjct: 389 NRGNTKKQLKDYQGAIADYNKAIELDPQHAYGYYNR------GLAKKNLGDYQGAIADYN 442

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           + IT  P+  +                 +       T+  +   ++ +E    
Sbjct: 443 KAITINPQHADA-----------FNNRGNAKDGLGDTQGAISDYNKAIELDPQ 484


>gi|52549469|gb|AAU83318.1| O-linked GlcNAc transferase [uncultured archaeon GZfos27E6]
          Length = 206

 Score = 39.3 bits (91), Expect = 0.55,   Method: Composition-based stats.
 Identities = 10/69 (14%), Positives = 26/69 (37%), Gaps = 3/69 (4%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            +     +++ + +A   FN+  +  P   +A           Y   +Y++A    +E +
Sbjct: 127 NEGEALFEQKKYDEAIRCFNEAIKLNPSYELAWN---NKGTALYMLKRYKEAIKCFDEVL 183

Query: 122 TQYPESKNV 130
              P ++  
Sbjct: 184 KNNPNNETA 192


>gi|13324600|gb|AAK18803.1|AF305611_1 LMP1 [Borrelia burgdorferi N40]
 gi|312149145|gb|ADQ29216.1| Surface-located membrane protein 1 (LMP1) [Borrelia burgdorferi
           N40]
          Length = 849

 Score = 39.3 bits (91), Expect = 0.55,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 44/220 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLG 117
           +  ++     NF ++ EY N       F   A+K    ++   +  ++   K +++    
Sbjct: 611 KAGIVSNNLGNFKQSEEYLNF------FNANAKKPNEIAIYNLSIAKFENNKLEESLETI 664

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYV 175
            + I   P  +  +Y  YL      +            +  +   S ++E+     S Y+
Sbjct: 665 NKAIDLNP--EKSEY-LYLKASINLKK--------ENYQNAISLYSLVIEKNPENTSAYI 713

Query: 176 KGARFYVTVGRNQLAAKEVE-------------IGRYYLKRGEYVAAIPRFQLVLANYSD 222
             A+ Y   G    A   +E             +G  Y K   Y  AI  F+  + N   
Sbjct: 714 NLAKAYEKSGNKSQAISTLEKIINKNNKLALNNLGILYKKEKNYQKAIEIFEKAIIN--- 770

Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQ 259
                EA   L    + +     A++++     ++   P+
Sbjct: 771 --SDIEAKYNLATTLIEINDNTRAKDLLREYTKLKPNNPE 808



 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 3/62 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y KA + LK++N+  A   ++      P       + +  A     +G   QA S  E+
Sbjct: 678 LYLKASINLKKENYQNAISLYSLVIEKNPEN---TSAYINLAKAYEKSGNKSQAISTLEK 734

Query: 120 YI 121
            I
Sbjct: 735 II 736



 Score = 35.5 bits (81), Expect = 9.3,   Method: Composition-based stats.
 Identities = 11/124 (8%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
            +   ++  D +  + +   A  +    +  KA   + +  +        ++       +
Sbjct: 462 NEFLKNNPNDAQASKTL---AQAYENNGDLLKAENAYEKIIKL----TNTQEDHYKLGII 514

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           ++   KY+ +    ++ I   P+ K      +  G++   + ++        K  ++   
Sbjct: 515 RFKLKKYEHSIESFDQTIKLDPKHKK---ALHNKGIALMMLNKN--------KKAIESFE 563

Query: 164 RIVE 167
           + ++
Sbjct: 564 KAIQ 567


>gi|123243012|emb|CAM22622.1| cell division cycle 27 homolog (S. cerevisiae) [Mus musculus]
          Length = 831

 Score = 39.3 bits (91), Expect = 0.55,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 593 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 642

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178
           N    +Y +GM Y +  +     +   +  L    +          +      S      
Sbjct: 643 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 698

Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                V   +N L               +Y +A+   + +                + + 
Sbjct: 699 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 753

Query: 237 YVALALMDEA 246
           Y  L     A
Sbjct: 754 YKKLGQTHLA 763


>gi|116625046|ref|YP_827202.1| peptidase C14, caspase catalytic subunit p20 [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116228208|gb|ABJ86917.1| peptidase C14, caspase catalytic subunit p20 [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 688

 Score = 39.3 bits (91), Expect = 0.55,   Method: Composition-based stats.
 Identities = 13/122 (10%), Positives = 41/122 (33%), Gaps = 21/122 (17%)

Query: 55  RYQREVYEKAVLFLKEQ---NFSKAYEYFNQCSRDFPFAGVARKS-LLMSAF-VQYSAGK 109
           +   ++ ++ +    +    ++ KA   F       P    ++ +  L   +   +    
Sbjct: 384 KAALDLLQQGLREYHKGAEQDYKKAAAIFENALAADP--SYSQAAFYLGLTYSALF---D 438

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y++A +  +  I   P+        YL   +       +  D       ++ ++ +++R 
Sbjct: 439 YEKAGAAYKRAIQLDPD--------YLEAHANY---GGMLLDTGDVDEAIRQLNTVLQRE 487

Query: 170 TN 171
             
Sbjct: 488 PK 489


>gi|186681642|ref|YP_001864838.1| hypothetical protein Npun_F1170 [Nostoc punctiforme PCC 73102]
 gi|186464094|gb|ACC79895.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC
           73102]
          Length = 307

 Score = 39.3 bits (91), Expect = 0.55,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 53/165 (32%), Gaps = 40/165 (24%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
              L++  +++  + ++ FL      +       S+T +     + E  V  ++  ++ +
Sbjct: 1   MSNLWRLFISVIIAFSLTFLTLSAHSA-----PVSITQITASNFL-ELGVDKMRRGSYQE 54

Query: 76  AYEYFN---QCSRDFP----------------------------FAGVARKSLLMSAFVQ 104
           A E FN   +  +DF                             FA    ++ L      
Sbjct: 55  AIESFNQAIEVEKDFAVAYSDRCLAYLQLQDYHQAIADCTQAINFAPNHSEAYLNRGLAL 114

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           Y  G Y  A     + I   P        YY  G+++A   +D  
Sbjct: 115 YRQGDYSGAIVDYNQAIALKPSDFR---AYYNRGLAFAGDGKDSE 156


>gi|195941941|ref|ZP_03087323.1| surface-located membrane protein 1 [Borrelia burgdorferi 80a]
          Length = 957

 Score = 39.3 bits (91), Expect = 0.56,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 44/220 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLG 117
           +  ++     NF ++ EY N       F   A+K    ++   +  ++   K +++    
Sbjct: 719 KAGIVSNNLGNFKQSEEYLNF------FNANAKKPNEIAIYNLSIAKFENNKLEESLETI 772

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYV 175
            + I   P  +  +Y  YL      +            +  +   S ++E+     S Y+
Sbjct: 773 NKAIDLNP--EKSEY-LYLKASINLKK--------ENYQNAISLYSLVIEKNPENTSAYI 821

Query: 176 KGARFYVTVGRNQLAAKEVE-------------IGRYYLKRGEYVAAIPRFQLVLANYSD 222
             A+ Y   G    A   +E             +G  Y K   Y  AI  F+  + N   
Sbjct: 822 NLAKAYEKSGNKSQAISTLEKIINKNNKLALNNLGILYKKEKNYQKAIEIFEKAIIN--- 878

Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQ 259
                EA   L    + +     A++++     ++   P+
Sbjct: 879 --SDIEAKYNLATTLIEINDNTRAKDLLREYTKLKPNNPE 916



 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 3/62 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y KA + LK++N+  A   ++      P       + +  A     +G   QA S  E+
Sbjct: 786 LYLKASINLKKENYQNAISLYSLVIEKNPEN---TSAYINLAKAYEKSGNKSQAISTLEK 842

Query: 120 YI 121
            I
Sbjct: 843 II 844



 Score = 35.5 bits (81), Expect = 9.2,   Method: Composition-based stats.
 Identities = 11/124 (8%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
            +   ++  D +  + +   A  +    +  KA   + +  +        ++       +
Sbjct: 570 NEFLKNNPNDAQASKTL---AQAYENNGDLLKAENAYEKIIKL----TNTQEDHYKLGII 622

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           ++   KY+ +    ++ I   P+ K      +  G++   + ++        K  ++   
Sbjct: 623 RFKLKKYEHSIESFDQTIKLDPKHKK---ALHNKGIALMMLNKN--------KKAIESFE 671

Query: 164 RIVE 167
           + ++
Sbjct: 672 KAIQ 675


>gi|159477839|ref|XP_001697016.1| hypothetical protein CHLREDRAFT_184916 [Chlamydomonas reinhardtii]
 gi|158274928|gb|EDP00708.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 258

 Score = 39.3 bits (91), Expect = 0.56,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 45/142 (31%), Gaps = 17/142 (11%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGK 109
           T      + YE  V+  +++ F++A +   +  + +     +  + +     F  ++  K
Sbjct: 129 TGEATCEDYYELGVVLTRKKLFTQATKNLEKAKKVW-DGEESELAQVHNALGFCYFNMEK 187

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
              A       +   P      YV      +    + D    +R     LQ     +   
Sbjct: 188 TDMAIEEYRLAVALQPG-----YV------TAWNNLGDALEKERRWPEALQAYQEALTYA 236

Query: 170 TNSPYVKGARFYVTVGRNQLAA 191
            N+     AR      + +++ 
Sbjct: 237 PNNR---IARQRCDYCKEKVSR 255


>gi|47230441|emb|CAF99634.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1210

 Score = 39.3 bits (91), Expect = 0.56,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 74/209 (35%), Gaps = 38/209 (18%)

Query: 69  KEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
            + NF +A ++F +    ++D P    +    L  A       ++       E  + Q P
Sbjct: 596 DKGNFYEASDWFKEALQINQDHP-DAWSLIGNLHLA-----KQEWGPGQKKFERILKQ-P 648

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQ----RATKLMLQYMSRIVERYTNSPYVKGA--- 178
            ++N  Y    +G  + Q +     D+    R     L    +++     + Y       
Sbjct: 649 STQNDTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGA 708

Query: 179 ----RFYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLA---NYS 221
               + Y    R+  A  +E         + +   Y+++ +Y++A+  ++  L     Y 
Sbjct: 709 VLAHKGYYREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKYQ 768

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVV 250
           +     E +  L  A      + E ++++
Sbjct: 769 NT----EVLLYLARALFKCGKLQECKQML 793


>gi|150018780|ref|YP_001311034.1| TPR repeat-containing protein [Clostridium beijerinckii NCIMB 8052]
 gi|149905245|gb|ABR36078.1| TPR repeat-containing protein [Clostridium beijerinckii NCIMB 8052]
          Length = 396

 Score = 39.3 bits (91), Expect = 0.56,   Method: Composition-based stats.
 Identities = 25/176 (14%), Positives = 51/176 (28%), Gaps = 48/176 (27%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-----NQCSRDFPFAGVA 93
            +  S D  + S +       + ++A   +++  +  A E            D       
Sbjct: 242 AKIDSEDQKVKSDSYKNNILGMLDEAEKSIRDGKYEIAAEDLINVKNENLDND------- 294

Query: 94  RKSLLMS------------AF----VQYSAGKYQQA------ASLGEEYITQYPESKNVD 131
            K+                 +      Y   KY +A       S  +  I        + 
Sbjct: 295 TKAKFDKLWQDLKISGLWPIYNDGNKLYKQKKYAEALPKLKMISQIDSDIDI------MP 348

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           ++ Y +G  Y + I D           L Y  ++ ++Y  + Y   A + +    N
Sbjct: 349 WLMYQIGTCY-KEINDYS-------NALIYFRQVKDKYPKTEYASYADYSMKEMGN 396


>gi|322514505|ref|ZP_08067542.1| lipopolysaccharide N-acetylglucosaminyltransferase [Actinobacillus
           ureae ATCC 25976]
 gi|322119575|gb|EFX91653.1| lipopolysaccharide N-acetylglucosaminyltransferase [Actinobacillus
           ureae ATCC 25976]
          Length = 395

 Score = 39.3 bits (91), Expect = 0.56,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 75/197 (38%), Gaps = 32/197 (16%)

Query: 48  LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           LD+      ++++  K   A  F+    + +A  Y+     +   +  A  SL     + 
Sbjct: 103 LDASPHYSIEKKLLAKQQLAKDFMAAGFYDRAENYYILLLDE---SEFAVNSLTQLMVIY 159

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
               ++++A ++ E+ +   P++  V   +Y     Y +  + +       +  L  + +
Sbjct: 160 QKTKEWKKAINVSEKLLKIEPDTDKVPLAHY-----YCEYAQTIKT--ENVEEHLNALKK 212

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
            +E                      A   + +G YYL++ ++  A+  F+ ++    D  
Sbjct: 213 ALEYSP-----------------LCARASILLGDYYLEQYQFKQALVHFEHLVV--QDPS 253

Query: 225 HAEEAMARLVEAYVALA 241
           +  E + ++   Y+AL 
Sbjct: 254 YISEVLNKIKACYIALN 270


>gi|269849702|sp|Q8X5M0|BCSC_ECO57 RecName: Full=Putative cellulose synthase operon protein C; Flags:
           Precursor
          Length = 1154

 Score = 39.3 bits (91), Expect = 0.56,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 79/236 (33%), Gaps = 36/236 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 440 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 496

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 497 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 553

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197
             Q +       +  +V R   S  V      +   G+   A             ++ + 
Sbjct: 554 RAQWS-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 607

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            + L+R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 608 DWALQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 660



 Score = 35.9 bits (82), Expect = 5.7,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 353 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 409

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 410 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 455

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 456 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 504

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + ++ P      Y   L
Sbjct: 505 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 534


>gi|196249357|ref|ZP_03148055.1| Tetratricopeptide TPR_2 repeat protein [Geobacillus sp. G11MC16]
 gi|196211114|gb|EDY05875.1| Tetratricopeptide TPR_2 repeat protein [Geobacillus sp. G11MC16]
          Length = 490

 Score = 39.3 bits (91), Expect = 0.56,   Method: Composition-based stats.
 Identities = 17/115 (14%), Positives = 41/115 (35%), Gaps = 15/115 (13%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           E+A   L+++ F++A E        +P  ++          A   +  G  ++A     E
Sbjct: 155 ERARHLLEQERFAEAIEALEAIVSRYPEFWSAHN-----NLALAYFYNGDVERAKQKLLE 209

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
            + + P +        L  +  A +     +DQ     + + ++ +   +    Y
Sbjct: 210 VLKRDPGN--------LHALCNALVFAYYLHDQEEVAALCETLASVYPFFREHQY 256


>gi|319426862|gb|ADV54936.1| von Willebrand factor type A [Shewanella putrefaciens 200]
          Length = 663

 Score = 39.3 bits (91), Expect = 0.56,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 37/130 (28%), Gaps = 33/130 (25%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++A+   + Q++S A + F                       QY AG Y+QA    E+  
Sbjct: 359 QQAMQAYQSQDYSNAAKQFESPQWR--------------GSAQYKAGDYEQALKTFEQ-- 402

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                  +     Y  G +  Q+ +         K   Q        +        A+  
Sbjct: 403 ------DSSAQGLYNQGNALMQLGK-----PDKAKERYQAALEQQPNFP------DAKAN 445

Query: 182 VTVGRNQLAA 191
           + +    L  
Sbjct: 446 LALAEKLLEE 455


>gi|332705864|ref|ZP_08425940.1| serine/threonine protein kinase [Lyngbya majuscula 3L]
 gi|332355656|gb|EGJ35120.1| serine/threonine protein kinase [Lyngbya majuscula 3L]
          Length = 614

 Score = 39.3 bits (91), Expect = 0.57,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 44/141 (31%), Gaps = 22/141 (15%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEY----FNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
            Y   ++ K    ++ QN   A       + +     P    A  + +      +  G+Y
Sbjct: 492 DYPEALWSKG-AAIESQNTPTAITLALTLYEKAIAIKP--DFA-DAWINRGVALHKLGRY 547

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           ++A       I   P S +    +   G +         YDQ      +  M + ++   
Sbjct: 548 REAIEAYNRAIKLNPNSAD---AWSNKGAALWAK---REYDQ-----AIDSMEKALQIQP 596

Query: 171 NSPYVKGARFYVTVGRNQLAA 191
           N P  K  R      R +L  
Sbjct: 597 NHPNAKNLRQ---QAREKLGR 614


>gi|297196360|ref|ZP_06913758.1| serine/threonine protein kinase [Streptomyces pristinaespiralis
           ATCC 25486]
 gi|297153194|gb|EDY64741.2| serine/threonine protein kinase [Streptomyces pristinaespiralis
           ATCC 25486]
          Length = 764

 Score = 39.3 bits (91), Expect = 0.57,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 61/176 (34%), Gaps = 29/176 (16%)

Query: 99  MSAFVQYSAGKYQQAASLGE-----EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
             A+     G++ +A +  +        T  P+  +     Y  G+   ++ R       
Sbjct: 561 EMAYALGLMGRWAEALATYQDVAAARAATLGPDHPDTLAARYETGICLGRLGRGA----- 615

Query: 154 ATKLMLQYMSRIVERY-----TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
                L     +VE        + P    AR  + V   +L   E  +      R   V+
Sbjct: 616 ---EALDLYRSLVEDRTRVCGPDDPETLRARHGLGVNLGRLGRWEEALAE---ARD--VS 667

Query: 209 AIPRFQLVLANYSDAEHAEE----AMARLVEAYVALALMDE-AREVVSLIQERYPQ 259
           A+ R +++  ++ D   +      A+  L     AL + ++ A+E   ++   +P 
Sbjct: 668 AL-RERILGPDHPDTLVSRREVAVALGWLARWAEALGVYEQVAQERERVLGPEHPD 722


>gi|197122379|ref|YP_002134330.1| lytic transglycosylase catalytic [Anaeromyxobacter sp. K]
 gi|196172228|gb|ACG73201.1| Lytic transglycosylase catalytic [Anaeromyxobacter sp. K]
          Length = 750

 Score = 39.3 bits (91), Expect = 0.57,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 35/138 (25%), Gaps = 24/138 (17%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
               ++  A L  +     +A E      RD P      ++    A++   AG    A +
Sbjct: 343 ADDALFFAADLLARAGKSQEAREALAALVRDHPGGDYREEARFRLAWLLKQAGDLDGAIA 402

Query: 116 LG----------EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
                       + Y     E     Y          +        +   +      + +
Sbjct: 403 QLLAVEEEQAGRDGY-----EHARAAY---------WRARLLAGRGEDGRRAAEAVFTEL 448

Query: 166 VERYTNSPYVKGARFYVT 183
             RY    Y   AR  + 
Sbjct: 449 ATRYPTDYYGLLARARLD 466


>gi|194473652|ref|NP_001123971.1| tetratricopeptide repeat protein 38 [Rattus norvegicus]
 gi|149065694|gb|EDM15567.1| similar to FLJ20699 protein (predicted), isoform CRA_a [Rattus
           norvegicus]
          Length = 465

 Score = 39.3 bits (91), Expect = 0.57,   Method: Composition-based stats.
 Identities = 47/226 (20%), Positives = 74/226 (32%), Gaps = 54/226 (23%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLD---------SVTDVRYQRE-VYEKAVLFLKEQ 71
           FA+ +  S     L+G       D  LD         S T     RE ++  AV    + 
Sbjct: 60  FAMGLAIS-NGLVLIGTGTSVKLDKDLDLAVKTMVEFSQTQTLTPRERLHVSAVEMFAKG 118

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSA-----FVQYSAGKYQQAASLGEEYITQYPE 126
           NF KA E + Q  RD P          M A        +  G  +Q           YP 
Sbjct: 119 NFPKACELWEQILRDHPTD--------MLALKFSHDAYFYLGYQEQMRDSVAR---VYPF 167

Query: 127 -SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            + +     Y+ G+    ++    YDQ A KL  + +S  +E      +      ++   
Sbjct: 168 WTPDTPLSSYVKGIYSFGLMETNFYDQ-AQKLAKEALS--IE--PTDAWSVHTVAHIHEM 222

Query: 186 R--------------------NQLAAKEV-EIGRYYLKRGEYVAAI 210
           R                    + LA         Y +++G+Y AA+
Sbjct: 223 RAEIKDGLEFMQHSEGHWKDSDMLACHNYWHWALYLIEKGDYEAAL 268


>gi|34556913|ref|NP_906728.1| flagellar functional protein [Wolinella succinogenes DSM 1740]
 gi|34482628|emb|CAE09628.1| FLAGELLAR FUNCTIONAL PROTEIN [Wolinella succinogenes]
          Length = 778

 Score = 39.3 bits (91), Expect = 0.57,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 17/49 (34%)

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           + R   V+ +Y        A  R  E Y  L    +  E+   +   +P
Sbjct: 458 LERLDHVIKSYPGTPEERRAYERKAETYAELGEYPKVLEIERHLDPNHP 506


>gi|260061447|ref|YP_003194527.1| BatE, TRP domain containing protein [Robiginitalea biformata
           HTCC2501]
 gi|88785579|gb|EAR16748.1| BatE, TRP domain containing protein [Robiginitalea biformata
           HTCC2501]
          Length = 244

 Score = 39.3 bits (91), Expect = 0.57,   Method: Composition-based stats.
 Identities = 11/85 (12%), Positives = 22/85 (25%), Gaps = 7/85 (8%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQY 105
           L +         ++ KA     E  + +A  Y+           A              Y
Sbjct: 3   LAAPLGWSQADSLFHKATEAYNEGAYEEAVGYYEAILGDNRHSAALY-----YNLGNAYY 57

Query: 106 SAGKYQQAASLGEEYITQYPESKNV 130
             G+   +    E+ +   P    +
Sbjct: 58  KMGEIAPSIYYYEKALLLDPADPEI 82


>gi|113475743|ref|YP_721804.1| lytic transglycosylase catalytic subunit [Trichodesmium erythraeum
           IMS101]
 gi|110166791|gb|ABG51331.1| Lytic transglycosylase, catalytic [Trichodesmium erythraeum IMS101]
          Length = 720

 Score = 39.3 bits (91), Expect = 0.57,   Method: Composition-based stats.
 Identities = 33/234 (14%), Positives = 72/234 (30%), Gaps = 29/234 (12%)

Query: 38  WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKS 96
           WE+Q      L      +  + +Y  A          ++ E +      FP         
Sbjct: 237 WEKQDYGKGALAYQKATKTPQNLYRYARGLWLGGKIKESREAYKTLINTFPNGGEDTALG 296

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
           L+  +         + A    +  I  +P             +  ++++  +     +TK
Sbjct: 297 LIRLS----RLVDRKDAIPYLDRVIVNFPS--LAPEAL----LDKSKLLDKLD----STK 342

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                  +++  Y+NS     A     +     A   +++            A    Q +
Sbjct: 343 SASLLRQQLLREYSNSD--AAAILRWKLAEQAAAGGNLQV------------AWKWAQEL 388

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
             N  D + A +A   + +    L   ++A +    +  RYP  Y+A     ++
Sbjct: 389 TVNNPDHKLAAQAGFWVGKWAQQLGRTEDATKAFEYMILRYPHSYYAWRSAVML 442



 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 72/219 (32%), Gaps = 31/219 (14%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A   +++     A        +++    +A+  L+  A      G   +A  + +E 
Sbjct: 83  YVLANDLIQQGEAELAIAQLKDLEKEY--ITLAQYILVKRAQAYEQIGDTDKAKRVWQEV 140

Query: 121 ITQYPESKNVDYVYYLVGMSY----AQMIRDVPYDQRATKLMLQYMSR---------IVE 167
           +   P+   V    Y++G        + I   P      K+  + + +         ++ 
Sbjct: 141 LRYDPQEAVVVEALYILGKENPEYWDEAIAKFPGYPATVKIAQEKLKQNPNQPRLLLLIA 200

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEV------EIGRYYLKRGEYVAAIPRFQLVLANYS 221
           +Y    +V      +   R + A  E+       +   Y ++ +Y       +  LA Y 
Sbjct: 201 KY--GFHVPEYSTVLEQLRTKYA-SELTPEDWEMVAFGYWEKQDYG------KGALA-YQ 250

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            A    + + R          + E+RE    +   +P G
Sbjct: 251 KATKTPQNLYRYARGLWLGGKIKESREAYKTLINTFPNG 289


>gi|117923499|ref|YP_864116.1| hypothetical protein Mmc1_0183 [Magnetococcus sp. MC-1]
 gi|117607255|gb|ABK42710.1| hypothetical protein Mmc1_0183 [Magnetococcus sp. MC-1]
          Length = 192

 Score = 39.3 bits (91), Expect = 0.57,   Method: Composition-based stats.
 Identities = 22/144 (15%), Positives = 40/144 (27%), Gaps = 31/144 (21%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE------------------ 62
            F   +   +A+  L G          L     V ++   +                   
Sbjct: 9   SFGRAVALLLALTGLSGCASPGLPMGTLSPTEGVGFRESRFAALEALQNYRQCKQEALTM 68

Query: 63  --KAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFV-----QYSAGKYQQAA 114
             +A    +   +  +   F QC    P  +        M A+         AG  +QA 
Sbjct: 69  DREARSSGQAARYLASARLFEQCETRLPPGSADVATEERMRAYAVGILDYIKAGDLEQAH 128

Query: 115 SLGEEYITQYPESKNVDYVYYLVG 138
              +++   +   K+ D   YL G
Sbjct: 129 VNLDKFRRTF---KDQD--LYLKG 147


>gi|237750111|ref|ZP_04580591.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
 gi|229374298|gb|EEO24689.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
          Length = 802

 Score = 39.3 bits (91), Expect = 0.57,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 34/90 (37%), Gaps = 13/90 (14%)

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
             +  + N    +  +                    +   G+Y   + R+  VLANY + 
Sbjct: 443 DFLHYHPNDKLAQKVKERDDSLL-------------FQVTGDYKTKLERYNYVLANYPNT 489

Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLI 253
           E A++A+    + Y+     +E  ++ SL+
Sbjct: 490 ESAKKALELKAKLYLENKKYEEILQMQSLL 519



 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/126 (14%), Positives = 43/126 (34%), Gaps = 15/126 (11%)

Query: 65  VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV--QYSAGKYQQ--AASLGEEY 120
              +  + + +A E   +  + +P +  A+  +  +        + + Q   A +    +
Sbjct: 199 RELMNARKYPEALEKIAKALKMYPNSLFAKDMVYYTIIALSHSKSKESQSYLAEAAIP-W 257

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           I  Y     +  V YL+  +     +         K    Y++R +E Y  + Y   A  
Sbjct: 258 IKAYASDDKIPEVMYLLSKTLLAQNK--------MKEAYYYLNRTIEEYPKTRYA--ALS 307

Query: 181 YVTVGR 186
            + +  
Sbjct: 308 KMQIAN 313


>gi|229543734|ref|ZP_04432794.1| TPR repeat-containing protein [Bacillus coagulans 36D1]
 gi|229328154|gb|EEN93829.1| TPR repeat-containing protein [Bacillus coagulans 36D1]
          Length = 222

 Score = 39.3 bits (91), Expect = 0.57,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 47/167 (28%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFP--------FAGV------ARKSL---------- 97
           E+ +  L+++ + +A ++FN+   D P        F  V        K+           
Sbjct: 5   ERGMKALQKKKYDEALKWFNEVIEDNPDDPVGYIHFGDVLLAAGEREKAQNFYRKALALK 64

Query: 98  ------LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-------- 143
                      +QY  G Y+ AA   E+ I    + K+    Y+++GM +          
Sbjct: 65  ELPTPFYSLGTIQYEEGHYEAAAGCFEKAIQLGLKDKDT---YFMLGMCFMMLGNPRFAM 121

Query: 144 --MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
             + R V  D+  T+   QY   +++    S +   A         Q
Sbjct: 122 PYLQRSVELDEGDTEARFQYALSLIK----SNFADEALKQFQKVLEQ 164


>gi|158523125|ref|YP_001530995.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
 gi|158511951|gb|ABW68918.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
          Length = 284

 Score = 39.3 bits (91), Expect = 0.57,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 38/151 (25%), Gaps = 25/151 (16%)

Query: 65  VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
           +  ++   + KA E F +     P    A  +    A  ++  G Y+ A +     +   
Sbjct: 1   MASVQAGQYDKAVEAFTRVLDLSP--DFAP-AYNNRAAARWDLGDYEGAVADYNRALAIN 57

Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG----ARF 180
           P+                        D       L  + R VE   +          A  
Sbjct: 58  PDFPE-----------SYNGRGKAFCDMGQMDKALADLDRAVELAPDFADAYNNRGVALR 106

Query: 181 YVTVGRNQLAAKEVEI-------GRYYLKRG 204
                   LA     I         +Y  RG
Sbjct: 107 KTGDFIGALADHSRAIQMRPDRAAEFYNARG 137


>gi|116284342|gb|AAH24550.1| Ttc38 protein [Mus musculus]
          Length = 471

 Score = 39.3 bits (91), Expect = 0.57,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 43/123 (34%), Gaps = 19/123 (15%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA---- 101
           V L     +  + +++  AV    + NF +A + + Q  RD P          M A    
Sbjct: 108 VELSQTQTLTPREQLHVSAVEMFAKGNFPRACDLWEQILRDHPTD--------MLALKFS 159

Query: 102 -FVQYSAGKYQQAASLGEEYITQYPE-SKNVDYVYYLVGMSYAQMIRDVPYD--QRATKL 157
               +  G  +Q           YP  + ++    Y+ G+    ++    YD  Q+  K 
Sbjct: 160 HDAYFYLGYQEQMRDSVAR---VYPFWTPDIPLNSYVKGIYSFGLMETNFYDQAQKLAKE 216

Query: 158 MLQ 160
            L 
Sbjct: 217 ALS 219


>gi|148255708|ref|YP_001240293.1| TPR repeat-containing protein [Bradyrhizobium sp. BTAi1]
 gi|146407881|gb|ABQ36387.1| putative TPR repeat protein [Bradyrhizobium sp. BTAi1]
          Length = 1406

 Score = 39.3 bits (91), Expect = 0.57,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 55/161 (34%), Gaps = 39/161 (24%)

Query: 107  AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
            AG+Y  A    E  ++  P    + Y + +           V  +Q  ++  +  + R +
Sbjct: 863  AGRYDAAVGHYETALSLSPNHPGILYAFAM-----------VRQNQGMSEEAMVLLRRAI 911

Query: 167  ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK----------RGEYVA-------- 208
            E          A   +       A K++E  + YLK              +A        
Sbjct: 912  ENKPQHLDAHFALGNLLYT----AGKDIEAAKCYLKVLEFSPEHAETHNNIANVLLRQGH 967

Query: 209  ---AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
               AI  ++  +A+  D     +A   L  AY+ L  ++EA
Sbjct: 968  RERAIEHYKRAIASRPD---YGDAYGNLGNAYLELNRLEEA 1005


>gi|332291862|ref|YP_004430471.1| TPR domain protein [Krokinobacter diaphorus 4H-3-7-5]
 gi|332169948|gb|AEE19203.1| TPR domain protein [Krokinobacter diaphorus 4H-3-7-5]
          Length = 847

 Score = 39.3 bits (91), Expect = 0.58,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 27/67 (40%)

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           K  EY  A  R + +LA   D +    A+  L + Y A+    +A    + I   YP   
Sbjct: 565 KFKEYPLAAQRLEKLLAFNPDEKLVLPALYNLYQVYGAMDASAKANIYKNKITAEYPNSR 624

Query: 262 WARYVET 268
           +A  +  
Sbjct: 625 YATRINN 631



 Score = 35.9 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 46/128 (35%), Gaps = 24/128 (18%)

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            +  +D  + L+G +     + VP         L+  + ++  Y  S  +  A+ +    
Sbjct: 114 RNPQMDEAFLLLGKARYYDQQFVP--------ALEAFNYVLAYYPKSNNIAQAKIWKEKT 165

Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV--LANYSDAEHAEEAMARLVEAYVALALM 243
             +L   EV              AI   + +  +      +   +A A L +AY+ L + 
Sbjct: 166 NIRLENNEV--------------AIKNLKQIFKVEKNLKDQDIADAHAMLTQAYLNLGIQ 211

Query: 244 DEAREVVS 251
           D A + + 
Sbjct: 212 DSAFQYIQ 219


>gi|320661633|gb|EFX29048.1| cellulose synthase subunit BcsC [Escherichia coli O55:H7 str. USDA
           5905]
          Length = 1157

 Score = 39.3 bits (91), Expect = 0.58,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 79/236 (33%), Gaps = 36/236 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197
             Q +       +  +V R   S  V      +   G+   A             ++ + 
Sbjct: 557 RAQWS-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            + L+R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 611 DWALQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 663



 Score = 35.9 bits (82), Expect = 6.3,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + ++ P      Y   L
Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537


>gi|320639846|gb|EFX09440.1| cellulose synthase subunit BcsC [Escherichia coli O157:H7 str.
           G5101]
 gi|320655851|gb|EFX23774.1| cellulose synthase subunit BcsC [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
          Length = 1157

 Score = 39.3 bits (91), Expect = 0.58,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 79/236 (33%), Gaps = 36/236 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197
             Q +       +  +V R   S  V      +   G+   A             ++ + 
Sbjct: 557 RAQWS-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            + L+R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 611 DWALQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 663



 Score = 35.9 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + ++ P      Y   L
Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537


>gi|291284902|ref|YP_003501720.1| Cellulose synthase operon protein C [Escherichia coli O55:H7 str.
           CB9615]
 gi|290764775|gb|ADD58736.1| Cellulose synthase operon protein C [Escherichia coli O55:H7 str.
           CB9615]
          Length = 1157

 Score = 39.3 bits (91), Expect = 0.58,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 79/236 (33%), Gaps = 36/236 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197
             Q +       +  +V R   S  V      +   G+   A             ++ + 
Sbjct: 557 RAQWS-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            + L+R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 611 DWALQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 663



 Score = 35.9 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + ++ P      Y   L
Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537


>gi|209524105|ref|ZP_03272656.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
 gi|209495480|gb|EDZ95784.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
          Length = 1676

 Score = 39.3 bits (91), Expect = 0.58,   Method: Composition-based stats.
 Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 16/121 (13%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
               + + E+ +   +++++ KA +++       FP    A        FV    G  + 
Sbjct: 12  SPAAQSLAERGLWCQQQKDYGKAVDWYKRALEVYFP---WAE-VHYNLGFVLEKLGDVED 67

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A +   + I   P   N    YY +G+   Q  R++          +      +     +
Sbjct: 68  AIACYRQAIIHKPNYTN---AYYNLGLILQQSGREI--------EAIAAYQSAIYLEPET 116

Query: 173 P 173
           P
Sbjct: 117 P 117


>gi|168746931|ref|ZP_02771953.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           EC4113]
 gi|168753343|ref|ZP_02778350.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           EC4401]
 gi|168765938|ref|ZP_02790945.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           EC4486]
 gi|168772515|ref|ZP_02797522.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           EC4196]
 gi|168779674|ref|ZP_02804681.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           EC4076]
 gi|168797361|ref|ZP_02822368.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           EC508]
 gi|195935058|ref|ZP_03080440.1| cellulose synthase subunit BcsC [Escherichia coli O157:H7 str.
           EC4024]
 gi|208808289|ref|ZP_03250626.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           EC4206]
 gi|208813880|ref|ZP_03255209.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           EC4045]
 gi|208820438|ref|ZP_03260758.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           EC4042]
 gi|209396215|ref|YP_002273011.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           EC4115]
 gi|187771657|gb|EDU35501.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           EC4196]
 gi|188018261|gb|EDU56383.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           EC4113]
 gi|189002386|gb|EDU71372.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           EC4076]
 gi|189359264|gb|EDU77683.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           EC4401]
 gi|189364597|gb|EDU83016.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           EC4486]
 gi|189379934|gb|EDU98350.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           EC508]
 gi|208728090|gb|EDZ77691.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           EC4206]
 gi|208735157|gb|EDZ83844.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           EC4045]
 gi|208740561|gb|EDZ88243.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           EC4042]
 gi|209157615|gb|ACI35048.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           EC4115]
 gi|326339997|gb|EGD63804.1| Cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           1125]
          Length = 1157

 Score = 39.3 bits (91), Expect = 0.58,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 79/236 (33%), Gaps = 36/236 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197
             Q +       +  +V R   S  V      +   G+   A             ++ + 
Sbjct: 557 RAQWS-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            + L+R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 611 DWALQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 663



 Score = 35.9 bits (82), Expect = 6.3,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + ++ P      Y   L
Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537


>gi|110331857|gb|ABG67034.1| protein phosphatase 5, catalytic subunit [Bos taurus]
          Length = 432

 Score = 39.3 bits (91), Expect = 0.58,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 48/156 (30%), Gaps = 31/156 (19%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF-- 102
              +   ++   E+  +A  + K +++  A ++++Q     P        +S    A+  
Sbjct: 13  EPPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS---LAYLR 69

Query: 103 --VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
                Y+     +A  + ++YI            YY    S   +           +  L
Sbjct: 70  TECYGYALADATRAVEMDKKYIK----------GYYRRAASNMAL--------GKFRAAL 111

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           +    +V+   +      A+         +  K  E
Sbjct: 112 RDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 144


>gi|15833664|ref|NP_312437.1| oxidoreductase subunit [Escherichia coli O157:H7 str. Sakai]
 gi|217324905|ref|ZP_03440989.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           TW14588]
 gi|12518248|gb|AAG58671.1|AE005579_1 putative oxidoreductase subunit [Escherichia coli O157:H7 str.
           EDL933]
 gi|13363884|dbj|BAB37833.1| putative oxidoreductase subunit [Escherichia coli O157:H7 str.
           Sakai]
 gi|217321126|gb|EEC29550.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           TW14588]
          Length = 1002

 Score = 39.3 bits (91), Expect = 0.58,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 79/236 (33%), Gaps = 36/236 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 288 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 344

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 345 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 401

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197
             Q +       +  +V R   S  V      +   G+   A             ++ + 
Sbjct: 402 RAQWS-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 455

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            + L+R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 456 DWALQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 508



 Score = 35.9 bits (82), Expect = 6.3,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 201 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 257

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 258 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 303

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 304 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 352

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + ++ P      Y   L
Sbjct: 353 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 382


>gi|315648356|ref|ZP_07901456.1| Tetratricopeptide TPR_2 repeat protein [Paenibacillus vortex V453]
 gi|315276291|gb|EFU39635.1| Tetratricopeptide TPR_2 repeat protein [Paenibacillus vortex V453]
          Length = 1112

 Score = 39.3 bits (91), Expect = 0.58,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 36/141 (25%), Gaps = 23/141 (16%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQY-SAGKYQQ 112
            + +Y    L   ++ + +A   +         FP            A   Y     + Q
Sbjct: 767 AKALYYLGNLLYDKKRYEEAVSSWEASVALDDSFPTP------QRNLALAYYNKRQDHAQ 820

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A +  +   +  P    V Y          Q+ + + +        ++    +VE     
Sbjct: 821 ALASLQTAFSLNPADARVFYEL-------DQLYKKLGHAPADRLKAMEEHMELVEL---- 869

Query: 173 PYVKGARFYVTVGRNQLAAKE 193
                         N L   E
Sbjct: 870 --RDDLYLEYITLHNTLNRYE 888


>gi|254795483|ref|YP_003080320.1| cellulose synthase subunit BcsC [Escherichia coli O157:H7 str.
           TW14359]
 gi|254594883|gb|ACT74244.1| cellulose synthase subunit [Escherichia coli O157:H7 str. TW14359]
          Length = 1002

 Score = 39.3 bits (91), Expect = 0.58,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 79/236 (33%), Gaps = 36/236 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 288 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 344

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 345 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 401

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197
             Q +       +  +V R   S  V      +   G+   A             ++ + 
Sbjct: 402 RAQWS-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 455

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            + L+R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 456 DWALQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 508



 Score = 35.9 bits (82), Expect = 6.3,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 201 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 257

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 258 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 303

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 304 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 352

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + ++ P      Y   L
Sbjct: 353 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 382


>gi|296126807|ref|YP_003634059.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
 gi|296018623|gb|ADG71860.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
          Length = 452

 Score = 39.3 bits (91), Expect = 0.58,   Method: Composition-based stats.
 Identities = 7/70 (10%), Positives = 23/70 (32%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
            V        +++ A      ++++ A   ++     +P +  +  S      +      
Sbjct: 238 PVESNPETIALFKSAEDLKNIKDYNNAVSTYSNVISQYPKSKYSVYSYFRIGDIYNQNKD 297

Query: 110 YQQAASLGEE 119
           Y  A  + ++
Sbjct: 298 YNNAFDMYKQ 307


>gi|154339850|ref|XP_001565882.1| intraflagellar transport protein IFT88 [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 810

 Score = 39.3 bits (91), Expect = 0.58,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 65/226 (28%), Gaps = 48/226 (21%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY-- 110
           +      +Y   +   K   + +A   F +            ++L+ S  V Y       
Sbjct: 507 EADNVEAIYNLGLAAKKLGLYEEAVRTFKR-----------MQALVDSNEVLYQIADLSD 555

Query: 111 ----QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
                 A       I + P   N       +G  YA+   DV            Y     
Sbjct: 556 LVGDPSALEWFNRLIGRVPTDPN---ALARIGSLYARDGDDV--------QAFHYYLEAY 604

Query: 167 ERY--------------TNSPYVKGARF---YVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
             Y                +     A       +  + Q    ++ +   + +RG+YV A
Sbjct: 605 RYYQVNMDVISWLGAYFVKNEVYDRAVQFFERASHIQPQEVKWQLMVASCHRRRGDYVQA 664

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
              ++ +   Y D     E +  L++      L +EA E    +++
Sbjct: 665 KRLYEQLHRKYPD---NVECLNYLMQLCKDAGLNEEANEWFKTMKK 707



 Score = 35.5 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 66/208 (31%), Gaps = 43/208 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFN---QCSR-----DFPFAGVARKSLLMSAFV-------QYS 106
           E A+L L+ +++  A E      +  R        +     +  +   +        QY 
Sbjct: 144 ESAMLALQ-KDYGAALEKAKDAGKLERSLCKKREQYG-FVEQINVDLTYAVHFNLAVQYQ 201

Query: 107 AGK-YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
             + Y +A +     I           V +         + ++   Q+   L ++   ++
Sbjct: 202 NHQLYTEALNTYNLIIRN---------VQFPQAGRLRVNMGNIYLAQQNYLLAIKMYRKV 252

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           ++         G      + RN        I   ++K G+Y  A   ++ V+    D   
Sbjct: 253 LDETP----TAGKELRYHLCRN--------IANAFVKLGQYRDAANSYETVVEGNGDVNA 300

Query: 226 AEEAMARLVEAYVALALMDEAREVVSLI 253
                  L+  Y AL   ++ +   + +
Sbjct: 301 T----YNLILCYYALGETEQMKRTFTRL 324


>gi|90414550|ref|ZP_01222524.1| hypothetical protein P3TCK_02211 [Photobacterium profundum 3TCK]
 gi|90324357|gb|EAS40923.1| hypothetical protein P3TCK_02211 [Photobacterium profundum 3TCK]
          Length = 668

 Score = 39.3 bits (91), Expect = 0.58,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 25/68 (36%), Gaps = 8/68 (11%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           K +   K  ++ KA E     +         ++S    A      GK +++ ++ E  + 
Sbjct: 370 KGIAEYKSGDYEKAIETLKPLAD--------QRSRYNLANAYAQTGKLEESEAIYESILK 421

Query: 123 QYPESKNV 130
             P + + 
Sbjct: 422 DDPNNTDA 429


>gi|21326645|gb|AAL30085.1| NodB-like protein [Xanthomonas campestris pv. campestris]
          Length = 900

 Score = 39.3 bits (91), Expect = 0.58,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 39/126 (30%), Gaps = 18/126 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           E+ +   KE+ ++ A E F +  +  P    A  +     FV Y   +Y +AA   E  +
Sbjct: 791 ERGLQLYKEKRYADAAEQFAEALKLRP--DFA-LAANNLGFVYYRQERYAEAARWLENTL 847

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPY--DQRATKLMLQYMSRIVERYTNSPYVKGAR 179
              P             ++Y  +        D+   +        +          + AR
Sbjct: 848 KIDPS----------RAVAYLNLGDAYAKAGDREKARKAYTTYLALQ---PQGAGAEQAR 894

Query: 180 FYVTVG 185
             +   
Sbjct: 895 AQLQTL 900


>gi|325180732|emb|CCA15139.1| cell division cycle protein 16 putative [Albugo laibachii Nc14]
          Length = 750

 Score = 39.3 bits (91), Expect = 0.59,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 21/56 (37%), Gaps = 3/56 (5%)

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE---AMARLVEAYVALALMDEAR 247
           EIG  Y K+  Y +A+   Q  L    +    +     +  L  AY  L    EA 
Sbjct: 605 EIGVVYYKQKRYTSAVESLQEALQACPNTASKQTFSVTLFNLASAYRKLGRYQEAE 660


>gi|302853740|ref|XP_002958383.1| hypothetical protein VOLCADRAFT_121713 [Volvox carteri f.
           nagariensis]
 gi|300256263|gb|EFJ40533.1| hypothetical protein VOLCADRAFT_121713 [Volvox carteri f.
           nagariensis]
          Length = 1179

 Score = 39.3 bits (91), Expect = 0.59,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 26/76 (34%), Gaps = 13/76 (17%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE---- 119
           A L  ++Q + +A  Y+    RDFP +G   +  L  A   +  G    A +        
Sbjct: 178 AGLAYQQQQYKEAMSYYRAALRDFPGSGCPAEVRLGIAACAFKLGDLATARAAYRRGLAD 237

Query: 120 --------YITQYPES 127
                   +   +P  
Sbjct: 238 CLRHLLTAF-QLHPGH 252


>gi|296126399|ref|YP_003633651.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
 gi|296018215|gb|ADG71452.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
          Length = 376

 Score = 39.3 bits (91), Expect = 0.59,   Method: Composition-based stats.
 Identities = 37/257 (14%), Positives = 81/257 (31%), Gaps = 42/257 (16%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ-----NFSKAYEYFNQCSRD 86
           +  L   + +S +        DV     +Y++A+   K+      N+ +A +   +  R 
Sbjct: 101 LISLSKEDFESYKTELYKHRGDVETDLNLYDEAIEDYKKALELNPNYIEAKKALEEADRK 160

Query: 87  FPFAGVARKSLLMSAFV----QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
                        + ++     Y+  +++ A     + I       N    Y   G+S  
Sbjct: 161 --LKEYNLNKSFDNYYIEGVNYYNKKQFEDALKTLNKAIEL---DPNKAKAYLYRGVSQL 215

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY--- 199
            M R+        +  ++   + +E   N P       Y    +N L   E  +  +   
Sbjct: 216 VMGRN--------EEAIKDFDKAIELDPNYP---KFYLYRGHSKNLLKKYEEAVKDFDKA 264

Query: 200 ----------YLKRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDE 245
                     Y+ RG     + +++  + ++        +  +A      + + L   DE
Sbjct: 265 IELDSNYAKAYMYRGVSKLGLNKYEEAIKDFDKTIELNPNYIDAYYHRGLSKLGLNQNDE 324

Query: 246 AREVVSLIQERYPQGYW 262
             E    I E  P   +
Sbjct: 325 GIEDFDKIAELNPDNSF 341



 Score = 38.6 bits (89), Expect = 0.97,   Method: Composition-based stats.
 Identities = 20/145 (13%), Positives = 53/145 (36%), Gaps = 20/145 (13%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFA 90
            ++G   ++ +D       D  Y +    +       + + +A + F++      ++   
Sbjct: 215 LVMGRNEEAIKDFDKAIELDPNYPKFYLYRGHSKNLLKKYEEAVKDFDKAIELDSNY--- 271

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
               K+ +     +    KY++A    ++ I   P    +D  YY  G+S   + ++   
Sbjct: 272 ---AKAYMYRGVSKLGLNKYEEAIKDFDKTIELNPN--YID-AYYHRGLSKLGLNQN--- 322

Query: 151 DQRATKLMLQYMSRIVERYTNSPYV 175
                   ++   +I E   ++ +V
Sbjct: 323 -----DEGIEDFDKIAELNPDNSFV 342


>gi|257459072|ref|ZP_05624191.1| TPR repeat-containing protein [Campylobacter gracilis RM3268]
 gi|257443457|gb|EEV18581.1| TPR repeat-containing protein [Campylobacter gracilis RM3268]
          Length = 276

 Score = 39.3 bits (91), Expect = 0.59,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 52/139 (37%), Gaps = 17/139 (12%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
              DS    + Q  V ++A     ++++S A E +N             K+  M   + Y
Sbjct: 152 TKSDSDFKSKDQASVLKEADTLYAKKDYSGAKERYNYLVSK---NYKPAKANYMLGEISY 208

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDY---VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
            +G Y +A +  ++ I+    +++ DY   + Y   +S+ ++               ++ 
Sbjct: 209 FSGSYAEAINYYKKSIS---HNESQDYTPKLLYHTAISFDKIGDKDS--------ANKFY 257

Query: 163 SRIVERYTNSPYVKGARFY 181
             +   Y +S   K A   
Sbjct: 258 KALKASYPDSKEAKAAPAR 276



 Score = 38.6 bits (89), Expect = 0.95,   Method: Composition-based stats.
 Identities = 9/65 (13%), Positives = 25/65 (38%)

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
           G Y  AI  ++  +++    ++  + +     ++  +   D A +    ++  YP    A
Sbjct: 211 GSYAEAINYYKKSISHNESQDYTPKLLYHTAISFDKIGDKDSANKFYKALKASYPDSKEA 270

Query: 264 RYVET 268
           +    
Sbjct: 271 KAAPA 275


>gi|302878804|ref|YP_003847368.1| hypothetical protein Galf_1586 [Gallionella capsiferriformans ES-2]
 gi|302581593|gb|ADL55604.1| hypothetical protein Galf_1586 [Gallionella capsiferriformans ES-2]
          Length = 460

 Score = 39.3 bits (91), Expect = 0.59,   Method: Composition-based stats.
 Identities = 22/184 (11%), Positives = 49/184 (26%), Gaps = 47/184 (25%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQ--NFSKAYEYFNQCSRDFPFAGVARKSLLM 99
           +S    +    D    R+ +E       E   ++  A   +   +  +    V  +SL  
Sbjct: 280 ASFKTVIADFPDADEARQAHESLANTYDENLRDYVNAIAAYEAIASRYKNDAVVLRSLQS 339

Query: 100 SAFVQY-SAGKYQQAASLGEE----Y---------------------------------I 121
            A +      +  QA +        +                                 +
Sbjct: 340 LARLYQDKTHQPAQALATYRRVYDIFKGREGLAALVKAQKIAVSHLSDWNQAIEINDLIM 399

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
             YP+S       Y  G+ Y +  +++ +         +    ++ RY      K A+  
Sbjct: 400 RAYPDSDEAVTALYGNGVIYEENKKEIEH-------ATRLYQDLINRYPQHELSKDAKRR 452

Query: 182 VTVG 185
           +   
Sbjct: 453 INTL 456


>gi|237751976|ref|ZP_04582456.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229376543|gb|EEO26634.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 298

 Score = 39.3 bits (91), Expect = 0.59,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 30/71 (42%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            ++  Y  AI  ++     Y  A++    M    +++ AL   D A+  +  +   YP  
Sbjct: 228 FEQKRYEDAIYYYKTSATRYDKADYMPRLMLHSAKSFEALKEKDNAKRFLETLIALYPTS 287

Query: 261 YWARYVETLVK 271
             A+  + L+K
Sbjct: 288 SEAKEAKKLIK 298


>gi|197123198|ref|YP_002135149.1| hypothetical protein AnaeK_2795 [Anaeromyxobacter sp. K]
 gi|196173047|gb|ACG74020.1| conserved hypothetical protein [Anaeromyxobacter sp. K]
          Length = 285

 Score = 39.3 bits (91), Expect = 0.59,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 39/118 (33%), Gaps = 9/118 (7%)

Query: 65  VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
               ++    +A       +  +P    A  +LL SA    +AG+ + A +L      +Y
Sbjct: 156 RAARRKGGLDRA-HALEDFTARYPRHPAADNALLESAEAYAAAGRGEAACALVRRTADEY 214

Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
           P    +      +    A++                 + R+V  Y  +P  + A   +
Sbjct: 215 PAGDAMSAALERLAACAARL--------GHADEERTLLQRLVSDYPGTPAAQRAGGRL 264



 Score = 35.5 bits (81), Expect = 7.6,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 35/122 (28%), Gaps = 26/122 (21%)

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
             E++  +YP     D        +YA   R         +     + R  + Y     +
Sbjct: 169 ALEDFTARYPRHPAADNALLESAEAYAAAGRG--------EAACALVRRTADEYPAGDAM 220

Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR--FQLVLANYSDAEHAEEAMARL 233
             A   +     +L                  A   R   Q ++++Y     A+ A  RL
Sbjct: 221 SAALERLAACAARLGH----------------ADEERTLLQRLVSDYPGTPAAQRAGGRL 264

Query: 234 VE 235
            +
Sbjct: 265 GQ 266


>gi|85704959|ref|ZP_01036059.1| TPR domain protein [Roseovarius sp. 217]
 gi|85670281|gb|EAQ25142.1| TPR domain protein [Roseovarius sp. 217]
          Length = 186

 Score = 39.3 bits (91), Expect = 0.59,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 38/122 (31%), Gaps = 16/122 (13%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +  +    L+  +   A E+ +      P    A    L S    +   +Y  A    E+
Sbjct: 69  LLRRGQDALEAGDLGAAIEHLSAAIDHAP--DFAEAWHLRSV-AFFKQERYGLALYDIEQ 125

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ-RATKLMLQYMSRIVERYTNSPYVKGA 178
            +   P   NV Y     G+        V  D+     L     SR +  + +   V  A
Sbjct: 126 ALALEPRHFNVIY-----GL-------GVLLDELGQPDLAEDAFSRALAIHPHHEDVTKA 173

Query: 179 RF 180
           R 
Sbjct: 174 RE 175


>gi|320191422|gb|EFW66072.1| Cellulose synthase operon protein C [Escherichia coli O157:H7 str.
           EC1212]
          Length = 1157

 Score = 39.3 bits (91), Expect = 0.59,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 79/236 (33%), Gaps = 36/236 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197
             Q +       +  +V R   S  V      +   G+   A             ++ + 
Sbjct: 557 RAQWS-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            + L+R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 611 DWALQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 663



 Score = 35.9 bits (82), Expect = 6.1,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + ++ P      Y   L
Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537


>gi|224024273|ref|ZP_03642639.1| hypothetical protein BACCOPRO_00996 [Bacteroides coprophilus DSM
           18228]
 gi|224017495|gb|EEF75507.1| hypothetical protein BACCOPRO_00996 [Bacteroides coprophilus DSM
           18228]
          Length = 1053

 Score = 39.3 bits (91), Expect = 0.59,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 72/222 (32%), Gaps = 46/222 (20%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSA 101
            R + L    +      +Y +   +L ++ + KA  Y  +   +D  F+     +L+  +
Sbjct: 450 KRPMTLPEDFNWNSAFGLYTQGEQWLNQKVWDKAESYLKKSLKQDANFSP----ALVRLS 505

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
            + Y  G+YQ+   L E  +         +Y+Y   G++                     
Sbjct: 506 SLYYREGRYQEMIPLLERALGLNTYDGEANYLY---GLAN--------RMLGNATEAKAA 554

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
            +  +  ++ S               + AA E ++G  Y     +  A          Y+
Sbjct: 555 FA--IATFSASV--------------RTAAYE-QLGEMYACDRNWTKA--------EQYA 589

Query: 222 DAEHAEEAMA-----RLVEAYVALALMDEAREVVSLIQERYP 258
                  AM       L   Y      + A+E +S + ++ P
Sbjct: 590 KKSLTYNAMNLHARQLLTMIYRKTGRTELAKEQISQVLDQLP 631


>gi|222053755|ref|YP_002536117.1| glycosyl transferase family 2 [Geobacter sp. FRC-32]
 gi|221563044|gb|ACM19016.1| glycosyl transferase family 2 [Geobacter sp. FRC-32]
          Length = 3011

 Score = 39.3 bits (91), Expect = 0.59,   Method: Composition-based stats.
 Identities = 18/118 (15%), Positives = 38/118 (32%), Gaps = 13/118 (11%)

Query: 54   VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
            V     VY  AV    E N ++A        R  P   +A         +  + G+ ++A
Sbjct: 1098 VEAPEAVYSAAVSLANEGNVAEAQNRLEHLLRHHPKFVLAHN---DLGVLYSNLGETEKA 1154

Query: 114  ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
             +  E+     P +       +   ++    +         T+  LQ   +++  +  
Sbjct: 1155 LAHFEQATQLEPTN-----ATFQKNLADFYQVV-----LGRTEDALQIYVKLLAMHPK 1202


>gi|67614426|ref|XP_667371.1| hypothetical protein [Cryptosporidium hominis TU502]
 gi|54658506|gb|EAL37145.1| hypothetical protein Chro.80252 [Cryptosporidium hominis]
          Length = 514

 Score = 39.3 bits (91), Expect = 0.59,   Method: Composition-based stats.
 Identities = 18/152 (11%), Positives = 49/152 (32%), Gaps = 30/152 (19%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQ----CSR------------DFPFAGVARKSLLM 99
             +E+ +      K  N+S A E + +      +            +   + + +   L 
Sbjct: 30  SAKELKDAGNESYKGGNYSDAREKYEKGLELLEKIDQKDDEKEGFGEDEMSELRQSLQLN 89

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
            A +     ++ +A  +  + + +   SKNV    Y  G++               +   
Sbjct: 90  LAMIYVKIQEWSKAIQVTGQVLKKN--SKNVK-ALYRRGLARLGF--------GMYEESK 138

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
           +    +++   ++     A   + V R ++  
Sbjct: 139 EDFQNVLKLDPSN---ADAHRQLKVLRQKIQE 167


>gi|320645346|gb|EFX14362.1| cellulose synthase subunit BcsC [Escherichia coli O157:H- str.
           493-89]
 gi|320650657|gb|EFX19123.1| cellulose synthase subunit BcsC [Escherichia coli O157:H- str. H
           2687]
          Length = 1157

 Score = 39.3 bits (91), Expect = 0.60,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 79/236 (33%), Gaps = 36/236 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197
             Q +       +  +V R   S  V      +   G+   A             ++ + 
Sbjct: 557 RAQWS-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            + L+R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 611 DWALQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 663



 Score = 35.9 bits (82), Expect = 6.1,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + ++ P      Y   L
Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537


>gi|303247343|ref|ZP_07333616.1| Peptidoglycan-binding lysin domain protein [Desulfovibrio
           fructosovorans JJ]
 gi|302491257|gb|EFL51146.1| Peptidoglycan-binding lysin domain protein [Desulfovibrio
           fructosovorans JJ]
          Length = 453

 Score = 39.3 bits (91), Expect = 0.60,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 40/121 (33%), Gaps = 18/121 (14%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKY 110
                   +EK + F K+  F +A + FN+  +  P      A +         Y   +Y
Sbjct: 302 QTSDAEAAFEKGIEFGKQNKFQQAVDSFNKAIKLNPNRADFYASR-----GHAHYYMKQY 356

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
            +A     + I + P   N    Y + G+S  +            +  +   ++ +    
Sbjct: 357 AKAIDDYTKAIEKNP---NFALAYSMRGLSRTRS--------GQYQQAITDFNKAIGFGP 405

Query: 171 N 171
           N
Sbjct: 406 N 406


>gi|296224840|ref|XP_002758232.1| PREDICTED: prolyl 3-hydroxylase 2 [Callithrix jacchus]
          Length = 708

 Score = 39.3 bits (91), Expect = 0.60,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 6/68 (8%)

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           F  Y  G+Y +A    + Y+  +P+ ++V     L  + Y + + D   D  A+    + 
Sbjct: 314 FAYYRVGEYVKALECAKAYLLCHPDDEDV-----LDNVDYYESLLDDSIDP-ASIEARED 367

Query: 162 MSRIVERY 169
           ++  V+R+
Sbjct: 368 LTMFVKRH 375


>gi|30248172|ref|NP_840242.1| TPR repeat-containing protein [Nitrosomonas europaea ATCC 19718]
 gi|30180057|emb|CAD84057.1| TPR repeat [Nitrosomonas europaea ATCC 19718]
          Length = 263

 Score = 39.3 bits (91), Expect = 0.60,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 45/127 (35%), Gaps = 14/127 (11%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
              +R      +  LK+ +F +A  YF +     P   +AR  L+      +S G+ ++A
Sbjct: 144 ETPERTYTNAGLCVLKQNDFERAQSYFQEALVIRPGYPLARLGLVEL---DFSRGEVKKA 200

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
            +    Y+  YP +                +   +            Y  ++ +R+ +S 
Sbjct: 201 WAAINRYLQTYPPAPG-----------SLWLAVRIARANGDVNAETNYAFQLQKRFPDSR 249

Query: 174 YVKGARF 180
             + +R 
Sbjct: 250 EARESRA 256


>gi|320666656|gb|EFX33639.1| cellulose synthase subunit BcsC [Escherichia coli O157:H7 str.
           LSU-61]
          Length = 1157

 Score = 39.3 bits (91), Expect = 0.60,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 79/236 (33%), Gaps = 36/236 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197
             Q +       +  +V R   S  V      +   G+   A             ++ + 
Sbjct: 557 RAQWS-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            + L+R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 611 DWALQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 663



 Score = 35.9 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + ++ P      Y   L
Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537


>gi|281180568|dbj|BAI56898.1| putative cellulose synthase [Escherichia coli SE15]
          Length = 1157

 Score = 39.3 bits (91), Expect = 0.60,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 78/235 (33%), Gaps = 34/235 (14%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK-----------EVEIGR 198
             Q         +  +V R  N   ++ A      G+   A             ++ +  
Sbjct: 557 RAQWN-----SNIQELVNRLQNDQVLETANRLRENGKEAEAEALLRQQPPSSRIDLTLAD 611

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 612 WAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 663


>gi|260912480|ref|ZP_05919016.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
           F0295]
 gi|260633399|gb|EEX51553.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
           F0295]
          Length = 857

 Score = 39.3 bits (91), Expect = 0.60,   Method: Composition-based stats.
 Identities = 9/67 (13%), Positives = 19/67 (28%), Gaps = 4/67 (5%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A    K  N+ +A   +    +  P    + +         + +    QA    E     
Sbjct: 635 ADQEYKRGNYPQAIADYKSLLKKTP----SAEVYYNLGNAYFRSDSIPQAILAYERAALI 690

Query: 124 YPESKNV 130
            P +  +
Sbjct: 691 NPGNSYI 697


>gi|255530043|ref|YP_003090415.1| TPR repeat-containing protein [Pedobacter heparinus DSM 2366]
 gi|255343027|gb|ACU02353.1| TPR repeat-containing protein [Pedobacter heparinus DSM 2366]
          Length = 289

 Score = 39.3 bits (91), Expect = 0.60,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 4/56 (7%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           + +G + +K G++  A+ RF  ++A       + +A   L  AY  L   +EA + 
Sbjct: 210 MSLGTFAMKSGQFDKAVNRFNDIIAIKP----SPDAYFYLGTAYENLGKNEEAIDA 261


>gi|220917987|ref|YP_002493291.1| hypothetical protein A2cp1_2888 [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219955841|gb|ACL66225.1| conserved hypothetical protein [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 285

 Score = 39.3 bits (91), Expect = 0.60,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 39/118 (33%), Gaps = 9/118 (7%)

Query: 65  VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
               ++    +A       +  +P    A  +LL SA    +AG+ + A +L      +Y
Sbjct: 156 RAARRKGGLDRA-HALEDFTARYPRHPAADNALLESAEAYAAAGRGEAACALVRRTADEY 214

Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
           P    +      +    A++                 + R+V  Y  +P  + A   +
Sbjct: 215 PAGDAMSAALERLAACAARL--------GHADEERTLLQRLVSDYPGTPAAQRAGGRL 264



 Score = 35.5 bits (81), Expect = 7.8,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 35/122 (28%), Gaps = 26/122 (21%)

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
             E++  +YP     D        +YA   R         +     + R  + Y     +
Sbjct: 169 ALEDFTARYPRHPAADNALLESAEAYAAAGRG--------EAACALVRRTADEYPAGDAM 220

Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR--FQLVLANYSDAEHAEEAMARL 233
             A   +     +L                  A   R   Q ++++Y     A+ A  RL
Sbjct: 221 SAALERLAACAARLGH----------------ADEERTLLQRLVSDYPGTPAAQRAGGRL 264

Query: 234 VE 235
            +
Sbjct: 265 GQ 266


>gi|126433545|ref|YP_001069236.1| peptidase S1 and S6, chymotrypsin/Hap [Mycobacterium sp. JLS]
 gi|126233345|gb|ABN96745.1| peptidase S1 and S6, chymotrypsin/Hap [Mycobacterium sp. JLS]
          Length = 464

 Score = 39.3 bits (91), Expect = 0.60,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 20/48 (41%), Gaps = 3/48 (6%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARK 95
             ++    E Y + +   +   +S+A E F      S D+P A   ++
Sbjct: 300 TPELSPADEAYREGLDNFEAGKYSEAIENFGTALAISGDYPGAREKQR 347


>gi|302337459|ref|YP_003802665.1| hypothetical protein Spirs_0937 [Spirochaeta smaragdinae DSM 11293]
 gi|301634644|gb|ADK80071.1| hypothetical protein Spirs_0937 [Spirochaeta smaragdinae DSM 11293]
          Length = 147

 Score = 39.3 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 43/115 (37%), Gaps = 9/115 (7%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           Y  A  +   ++   L     +       + V       +++++A        F +A EY
Sbjct: 9   YLTAAIVVSILSFSILASCASE------PEPVLSDLTPAQIFQQAQEAASNDKFQRAIEY 62

Query: 80  FNQCSRDFPFAGVARK--SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
           ++     +P    +R+  +    AF+ +  G  Q+A  L +  + +Y   +   Y
Sbjct: 63  YHYFLDSYP-NETSRRVEAEYEIAFLIHKMGNDQEALRLFDALLEKYRSEEAAVY 116


>gi|260221170|emb|CBA29467.1| hypothetical protein Csp_A12290 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 152

 Score = 39.3 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 28/81 (34%), Gaps = 17/81 (20%)

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
             +  + L+        GK  +A +  ++++   P    +    +L G+        +  
Sbjct: 30  DYSDVAQLV------RNGKLPEAMTKVDQFLVAKPRDPQM---RFLKGV--------IQR 72

Query: 151 DQRATKLMLQYMSRIVERYTN 171
           D   T   +   +R+ E Y  
Sbjct: 73  DSGKTSEAIATFTRLTEDYPE 93


>gi|225684617|gb|EEH22901.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
          Length = 982

 Score = 39.3 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 44/143 (30%), Gaps = 22/143 (15%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108
            D    +  Y     ++ +  + KAYE + Q        P              + Y   
Sbjct: 334 ADNGDAQSWYLLGRCYMSQAKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIN 387

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +Y+ A       I   P    +  V+Y +G +  +   +   D       L    R  E 
Sbjct: 388 QYRDALDAYSRAIRLNP---YISEVWYDLG-TLYESCNNQTND------ALDAYRRAAEL 437

Query: 169 YTNSPYVKGARFYVTVGRNQLAA 191
              + ++   +  + + ++  A 
Sbjct: 438 DPTNVHI---KARLQLLQSGQAG 457


>gi|254457199|ref|ZP_05070627.1| tetratricopeptide repeat domain protein [Campylobacterales
           bacterium GD 1]
 gi|207085991|gb|EDZ63275.1| tetratricopeptide repeat domain protein [Campylobacterales
           bacterium GD 1]
          Length = 618

 Score = 39.3 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 7/70 (10%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEEY 120
           +A +F+K  N+  A E FN+  +  PF+     +LL    A ++     Y  A      Y
Sbjct: 501 RAEMFIKSGNYPIAIEEFNKALKLAPFS-----ALLYFNIAILEGKIANYPLAIDSMNMY 555

Query: 121 ITQYPESKNV 130
           I   P++ NV
Sbjct: 556 IKMAPQAPNV 565



 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 46/143 (32%), Gaps = 32/143 (22%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLF------LKEQNFS-- 74
            LT+   I        +R  S      +   + Y +E Y++A         L   N++  
Sbjct: 6   ILTLILVILFTGCASTQRSVSPQQQAFNNGTLLYSQEKYKEAAAEFKTALQLNANNYNAK 65

Query: 75  --------------KAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
                         +  + FN+   + P  +           A+      +Y ++ S  +
Sbjct: 66  AWLAFSYCRSGQNGEGIDIFNKLIYNNPTHYNNFN-----GLAYCYNENQQYDESISASK 120

Query: 119 EYITQYPESKNVDYVYYLVGMSY 141
             +   P   N    Y+ +G+SY
Sbjct: 121 RALELKPNYSN---AYFNMGVSY 140


>gi|220910351|ref|YP_002485662.1| TPR repeat-containing protein [Cyanothece sp. PCC 7425]
 gi|219866962|gb|ACL47301.1| TPR repeat-containing protein [Cyanothece sp. PCC 7425]
          Length = 699

 Score = 39.3 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 43/132 (32%), Gaps = 22/132 (16%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            + +   + + +  A   F++     P    A K+     +     G  + A    ++ +
Sbjct: 578 NRGLALQELERYEDAIASFDKVIELNP---KAHKAWNNRGYALVKLGYDEDALESFDQAL 634

Query: 122 TQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           T  P     DY   YY   + YA         Q   K  L+ +   VE      Y + A 
Sbjct: 635 TLDP-----DYGAAYYNKAICYAL--------QGQVKPALENLQAAVELNPT--YRQEAA 679

Query: 180 FYVTVGRNQLAA 191
                  ++LA 
Sbjct: 680 VEPDF--DELAR 689


>gi|167043992|gb|ABZ08678.1| putative TPR domain protein [uncultured marine crenarchaeote
           HF4000_APKG3K8]
          Length = 405

 Score = 39.3 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 17/141 (12%), Positives = 48/141 (34%), Gaps = 19/141 (13%)

Query: 35  LVGWERQSSRDVYLDS-----VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
           L G +++S++   +       V     + +++ K +  + ++    A   F    R  P 
Sbjct: 35  LFGLKKKSAKTELVKKDETSLVDADFNRNKLFSKGINLMADEKLEDASHVFQMILRINPN 94

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
                 +LL   + ++    Y ++    ++ +    +  N D  + L  + Y +      
Sbjct: 95  D---VDALLKLGYSRFHLEDYTESMRAYDKILDI--DVANAD-AWNLKSLVYYER----- 143

Query: 150 YDQRATKLMLQYMSRIVERYT 170
              +     L    + ++   
Sbjct: 144 ---KVYGKALDSADKAIDSDP 161


>gi|110331873|gb|ABG67042.1| protein phosphatase 5, catalytic subunit [Bos taurus]
          Length = 430

 Score = 39.3 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 48/156 (30%), Gaps = 31/156 (19%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF-- 102
              +   ++   E+  +A  + K +++  A ++++Q     P        +S    A+  
Sbjct: 11  EPPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS---LAYLR 67

Query: 103 --VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
                Y+     +A  + ++YI            YY    S   +           +  L
Sbjct: 68  TECYGYALADATRAVEMDKKYIK----------GYYRRAASNMAL--------GKFRAAL 109

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           +    +V+   +      A+         +  K  E
Sbjct: 110 RDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 142


>gi|24217139|ref|NP_714622.1| TPR repeat-containing protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|24202175|gb|AAN51637.1| thioredoxin domain-containing protein [Leptospira interrogans
           serovar Lai str. 56601]
          Length = 357

 Score = 39.3 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 17/153 (11%), Positives = 49/153 (32%), Gaps = 25/153 (16%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---------CSRDFPFAGVA 93
             +   +   D +  +  ++  V + + + +SKA ++F +           +        
Sbjct: 221 ENEYLENLAKDPQGIQTNFQAGVYYFEAKEYSKAIQFFQKAIDSNDSKNLEKKH------ 274

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
             +L          G ++ A S    Y+++YP    V  V +    +Y ++         
Sbjct: 275 -DALFNLGISYLEIGNFKLAISTFNSYLSKYPNGDLVS-VLFFRANAYEEL--------N 324

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
             +       +++E   +    +  +  +    
Sbjct: 325 LKEEAKADYKKVLELTLDPDEKQDLQMRIDSLN 357



 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 36/99 (36%), Gaps = 14/99 (14%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             +Q+  + +    +S   K          N         G  YL+ G +  AI  F   
Sbjct: 253 KAIQFFQKAI----DSNDSKNLEKKHDALFNL--------GISYLEIGNFKLAISTFNSY 300

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAR-EVVSLIQ 254
           L+ Y + +     +     AY  L L +EA+ +   +++
Sbjct: 301 LSKYPNGDLVS-VLFFRANAYEELNLKEEAKADYKKVLE 338



 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 2/70 (2%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLA--NYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
            + G YY +  EY  AI  FQ  +   +  + E   +A+  L  +Y+ +     A    +
Sbjct: 239 FQAGVYYFEAKEYSKAIQFFQKAIDSNDSKNLEKKHDALFNLGISYLEIGNFKLAISTFN 298

Query: 252 LIQERYPQGY 261
               +YP G 
Sbjct: 299 SYLSKYPNGD 308


>gi|50513343|pdb|1QZ2|A Chain A, Crystal Structure Of Fkbp52 C-Terminal Domain Complex With
           The C-Terminal Peptide Meevd Of Hsp90
 gi|50513344|pdb|1QZ2|B Chain B, Crystal Structure Of Fkbp52 C-Terminal Domain Complex With
           The C-Terminal Peptide Meevd Of Hsp90
 gi|50513345|pdb|1QZ2|C Chain C, Crystal Structure Of Fkbp52 C-Terminal Domain Complex With
           The C-Terminal Peptide Meevd Of Hsp90
          Length = 336

 Score = 39.3 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 19/146 (13%), Positives = 46/146 (31%), Gaps = 30/146 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARKSL-------LMSAFVQYSAGK 109
           E+  ++ KE  + +A   + +      +        A+K+        L  A        
Sbjct: 152 ERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQA 211

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           +  A     + +     ++      +  G ++  +           +L      ++++ Y
Sbjct: 212 FSAAIESCNKALELDSNNEKG---LFRRGEAHLAVND--------FELARADFQKVLQLY 260

Query: 170 TNSPYVKGARFYVTVG----RNQLAA 191
            N+     A+  + V     R QLA 
Sbjct: 261 PNNK---AAKTQLAVCQQRIRRQLAR 283


>gi|324007316|gb|EGB76535.1| tetratricopeptide repeat protein [Escherichia coli MS 57-2]
          Length = 1157

 Score = 39.3 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 78/235 (33%), Gaps = 34/235 (14%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK-----------EVEIGR 198
             Q         +  +V R  N   ++ A      G+   A             ++ +  
Sbjct: 557 RAQWN-----SNIQELVNRLQNDQVLETANRLRENGKEAEAEAMLRQQPPSSRIDLTLAD 611

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 612 WAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 663


>gi|302037282|ref|YP_003797604.1| hypothetical protein NIDE1955 [Candidatus Nitrospira defluvii]
 gi|300605346|emb|CBK41679.1| conserved protein of unknown function, TPR-like [Candidatus
           Nitrospira defluvii]
          Length = 859

 Score = 39.3 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 40/94 (42%), Gaps = 7/94 (7%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
            +T+     VC +V  +  ++  +  ++VT      ++ E+     ++  FS+A +Y+ +
Sbjct: 32  TMTLLAIFFVCIVVAGQAWTTDALAQETVT----PEKLMEQGQSAYQQGAFSQAMQYWTE 87

Query: 83  CSRDFP---FAGVARKSLLMSAFVQYSAGKYQQA 113
             R +          K+ +      Y  G +++A
Sbjct: 88  AGRRYERDGKTREQIKAQVNLTQALYQTGHFKEA 121


>gi|254427897|ref|ZP_05041604.1| tetratricopeptide repeat domain protein [Alcanivorax sp. DG881]
 gi|196194066|gb|EDX89025.1| tetratricopeptide repeat domain protein [Alcanivorax sp. DG881]
          Length = 233

 Score = 39.3 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 38/118 (32%), Gaps = 17/118 (14%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREV-------YEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
            G    +S  V++  V       ++       Y +A+      N  +A   F   +  +P
Sbjct: 33  SGGAAANSDAVHIPPVPHDPKVEKIAQQAMGEYARALQTRMAGNNEQALVMFQSLAERYP 92

Query: 89  F--AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
                      L    +Q     Y +A +  E+ +     +    Y +  +G++  + 
Sbjct: 93  QLSGP-----QLNIGLIQMELEDYDKAQAAFEQSLAINDANP---YAHNGLGLALREQ 142


>gi|195014701|ref|XP_001984064.1| GH15212 [Drosophila grimshawi]
 gi|193897546|gb|EDV96412.1| GH15212 [Drosophila grimshawi]
          Length = 1192

 Score = 39.3 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 52/138 (37%), Gaps = 24/138 (17%)

Query: 136 LVGMSYAQM------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------RFYV 182
           L+ +    +       RD   +++  +  L    +++     + +           +  V
Sbjct: 603 LIALGNFSLQTLHQPSRDKEKERKHQEKALAIYKQVLRTDPRNIWATNGIGAVLAHKGCV 662

Query: 183 TVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
              R+  A  +E         + I   Y+++ +Y++AI  ++  +  +    +  E M  
Sbjct: 663 IEARDIFAQVREATADFCDVWLNIAHVYVEQKQYISAIQMYENCMKKFYKHNNV-EVMQY 721

Query: 233 LVEAYVALALMDEAREVV 250
           L  AY+    + EA+ V+
Sbjct: 722 LARAYLRANKLVEAKSVL 739


>gi|124378022|ref|NP_663411.2| cell division cycle protein 27 homolog [Mus musculus]
 gi|281312187|sp|A2A6Q5|CDC27_MOUSE RecName: Full=Cell division cycle protein 27 homolog
 gi|123243011|emb|CAM22621.1| cell division cycle 27 homolog (S. cerevisiae) [Mus musculus]
 gi|148702274|gb|EDL34221.1| mCG11216 [Mus musculus]
 gi|182887965|gb|AAI60241.1| Cell division cycle 27 homolog (S. cerevisiae) [synthetic
           construct]
          Length = 825

 Score = 39.3 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 587 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 636

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178
           N    +Y +GM Y +  +     +   +  L    +          +      S      
Sbjct: 637 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 692

Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                V   +N L               +Y +A+   + +                + + 
Sbjct: 693 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 747

Query: 237 YVALALMDEA 246
           Y  L     A
Sbjct: 748 YKKLGQTHLA 757


>gi|73667829|ref|YP_303844.1| TPR domain-containing protein [Methanosarcina barkeri str. Fusaro]
 gi|72394991|gb|AAZ69264.1| TPR-domain containing protein [Methanosarcina barkeri str. Fusaro]
          Length = 1013

 Score = 39.3 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 48/217 (22%), Positives = 75/217 (34%), Gaps = 39/217 (17%)

Query: 56  YQREVYEKAVLFLK-------EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           Y R  Y KA+ FL        E+NF KA E F+      P   VA +         Y   
Sbjct: 5   YARAWYSKALAFLNLKNQIGAEKNFEKALEAFDAVLAVNPEDSVAWQYRGNILR--YLDR 62

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
             ++A    E+ +   P+  N+    YL G+++  +          T+  L+  + ++ R
Sbjct: 63  -PEEALQAFEKALDLDPD--NIP-ARYLKGLTFGYL--------NLTEQALEAFNGVLGR 110

Query: 169 YTNSP----YVKGARFYVT------VGRNQLAAK--EVEIGRYYLKRGEYVAAIPRFQLV 216
                    Y   A   +T          + A    E     YY  RG  ++A  R +  
Sbjct: 111 DEKHIGALYYSGLALKQLTRDEEALEAFTRAAEFNPENSKAWYY--RGVILSAFGRNEEA 168

Query: 217 LANYSDA----EHAEEAMARLVEAYVALALMDEAREV 249
           L  Y            A     +AY+AL+   EA   
Sbjct: 169 LEAYGKTLKLEPLHSGAWEGEAKAYLALSRRREALRT 205


>gi|21228822|ref|NP_634744.1| hypothetical protein MM_2720 [Methanosarcina mazei Go1]
 gi|20907343|gb|AAM32416.1| hypothetical protein MM_2720 [Methanosarcina mazei Go1]
          Length = 1129

 Score = 39.3 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 37/112 (33%), Gaps = 14/112 (12%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y +        +F  A   +++     P    A        F      KYQ+A +  ++
Sbjct: 849 MYRQGKALEAMGDFEAAIACYDKILALDPKNIDAIN---NKGFALSKMEKYQEALATYDK 905

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            +   P++      +Y  G +   +  +           L+  ++ V+   +
Sbjct: 906 ALEYDPDNPA---AWYFKGCANFAISSN--------NAALECFNKTVQLKPD 946



 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 52/143 (36%), Gaps = 23/143 (16%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGK 109
           D  Y +  Y+K     K   +  A + +++      ++  A   +      AF     G+
Sbjct: 465 DSGYAKVWYKKGYDSSKLGKYKDAVKSYDEAIDLDENYTLAWYGK------AFALAKIGR 518

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y+ +    +  +   P+S  +   +Y  G+    ++ ++   Q A+    Q +       
Sbjct: 519 YEDSIVCYDRVLEVAPDSAEI---WYNKGL----LLDELGRYQEASDCYSQALQI----- 566

Query: 170 TNSPYVKGARFYVTVGRNQLAAK 192
            NS Y   ARF +      L+  
Sbjct: 567 -NSNYSV-ARFRLNKDIEMLSGN 587


>gi|302671508|ref|YP_003831468.1| TPR domain-containing protein [Butyrivibrio proteoclasticus B316]
 gi|302395981|gb|ADL34886.1| TPR domain-containing protein [Butyrivibrio proteoclasticus B316]
          Length = 472

 Score = 39.3 bits (91), Expect = 0.62,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 32/85 (37%), Gaps = 3/85 (3%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S+         Y  A    K +++  A   +++    + F      +L       Y +G 
Sbjct: 380 SLVGSELATSYYNAANDAYKAEDYETAIANYSKA---YQFDNTNVNTLYYLGNSYYESGD 436

Query: 110 YQQAASLGEEYITQYPESKNVDYVY 134
           ++ A +  +  IT +P++++     
Sbjct: 437 FENAKTTYDAVITNFPDTQSAAAAQ 461



 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 25/77 (32%), Gaps = 6/77 (7%)

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA----MARLVEAYVALALMD 244
           L   E+    Y      Y A    ++  +ANYS A   +      +  L  +Y      +
Sbjct: 381 LVGSELATSYYNAANDAYKA--EDYETAIANYSKAYQFDNTNVNTLYYLGNSYYESGDFE 438

Query: 245 EAREVVSLIQERYPQGY 261
            A+     +   +P   
Sbjct: 439 NAKTTYDAVITNFPDTQ 455


>gi|303279024|ref|XP_003058805.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226459965|gb|EEH57260.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 669

 Score = 39.3 bits (91), Expect = 0.62,   Method: Composition-based stats.
 Identities = 33/252 (13%), Positives = 66/252 (26%), Gaps = 56/252 (22%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARK 95
           G    + +   L   TD    R +  K    L+  +   A + F               +
Sbjct: 389 GDYENAQKYADLSVATDRYDARALVNKGNCHLQRGDLEGARDLFLEAVGVQ----ADCHE 444

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR--------- 146
           ++          G Y+ A +    +   +  + +   V Y +G     +           
Sbjct: 445 AIYNLGLAYIKLGAYEDALAA---FRKVHAMTPDNAEVLYQLGNVSDMLGDFPAAIKHLE 501

Query: 147 ----DVPYDQ-------------RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
                V  D                    L Y       Y +          + V R   
Sbjct: 502 ILHAKVSTDPGILARLGAIHAAIGDEAKALHYYQESHRLYPSD---------MDVLR--- 549

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQ-LVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
                 +G +Y+K G +  A   +Q   +    D ++       +      +  +++A  
Sbjct: 550 -----WLGTFYVKTGNWEKARELYQLACMIKPKDVKYR----LLVATCLRKVGNVNDALA 600

Query: 249 VVSLIQERYPQG 260
               I + YP  
Sbjct: 601 AYETIHKVYPDN 612


>gi|298530906|ref|ZP_07018307.1| glycosyl transferase family 2 [Desulfonatronospira thiodismutans
            ASO3-1]
 gi|298508929|gb|EFI32834.1| glycosyl transferase family 2 [Desulfonatronospira thiodismutans
            ASO3-1]
          Length = 1943

 Score = 39.3 bits (91), Expect = 0.62,   Method: Composition-based stats.
 Identities = 19/121 (15%), Positives = 39/121 (32%), Gaps = 17/121 (14%)

Query: 52   TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC----SRDFPFAGVARKSLLMSAFVQYSA 107
              V+   E    A+  ++++N+++A   + +         P    A  SL          
Sbjct: 925  EPVQPDDETVAHALEAIQQENWAEAIRRWQKVFLKHKNQAPAHAYASLSL-----AHRMQ 979

Query: 108  GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            G   +A  L E+    YP+ K +        +           D+       Q + ++  
Sbjct: 980  GNPDKAEKLIEQGQKNYPDDKEL--------LLEYVKTAKARRDRAEAAKRSQRLEQVSN 1031

Query: 168  R 168
            R
Sbjct: 1032 R 1032


>gi|145537956|ref|XP_001454689.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124422455|emb|CAK87292.1| unnamed protein product [Paramecium tetraurelia]
          Length = 432

 Score = 39.3 bits (91), Expect = 0.62,   Method: Composition-based stats.
 Identities = 12/106 (11%), Positives = 30/106 (28%), Gaps = 18/106 (16%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           Y   +Y K +       F  A E ++       ++        +        ++  +YQ+
Sbjct: 309 YIEAIYNKGIALFNLNRFQDAIECYDHVIAIDSNY------NDAYYNKGIALFNLNRYQE 362

Query: 113 AASLGEEYITQYPESKNVDY----VYYLV-----GMSYAQMIRDVP 149
           A    ++     P   +  Y      Y++      +        + 
Sbjct: 363 ALDCYDQATRINPNQSDAFYNKGNALYILKRYEEALECYNQSNKID 408


>gi|118594932|ref|ZP_01552279.1| SPY protein [Methylophilales bacterium HTCC2181]
 gi|118440710|gb|EAV47337.1| SPY protein [Methylophilales bacterium HTCC2181]
          Length = 621

 Score = 39.3 bits (91), Expect = 0.62,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 42/155 (27%), Gaps = 39/155 (25%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV-------QYSAGKYQQAASLGEEYITQ 123
             F  A  YF +    FP      +      F         +    Y  A +  EE I  
Sbjct: 51  NKFDIAAGYFRRAIYQFPDND---QIRYGLGFCLQRIGNEYHKNRNYLMAQAAFEEAIEI 107

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
            P++       + +G ++          Q   K  L      ++   ++           
Sbjct: 108 CPDNAEH---LFNLGNAFYA--------QGLFKKALNSFEESLQILPDNE---------- 146

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
                 A     I   Y K  +YV A   ++  L 
Sbjct: 147 ------AHH--NIANSYKKLNDYVKAKKHYEKALE 173


>gi|326914341|ref|XP_003203484.1| PREDICTED: intraflagellar transport protein 88 homolog [Meleagris
           gallopavo]
          Length = 818

 Score = 39.3 bits (91), Expect = 0.62,   Method: Composition-based stats.
 Identities = 35/283 (12%), Positives = 79/283 (27%), Gaps = 56/283 (19%)

Query: 6   GRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAV 65
              + +FE    ++   A T    +   +L     Q++    L   +D      +  K  
Sbjct: 436 LETLKMFEKKDSRVKSAAATNLSFLY--YLENELAQATNYADLAVSSDRYNPAALTNKGN 493

Query: 66  LFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
                +++ KA E++      D         +L           +  +A      ++  +
Sbjct: 494 TVFANEDYEKAAEFYKEALRNDCSCTE----ALYNLGLTYKKLNRTDEALDC---FLKLH 546

Query: 125 PESKNVDYVYYLVGMSY-------------AQMIRDVPYDQ-------------RATKLM 158
               N   V + +   Y              Q+I  VP D                    
Sbjct: 547 AILGNSAQVLHQIADIYEIMEDPNQAIEWLMQLISVVPTDPHVLSKLGKLYDNEGDKSQA 606

Query: 159 LQYMSRIVERYT--------------NSPYVKGARFYVTVGRNQL---AAKEVEIGRYYL 201
             Y       +               ++ + + A  Y       L      ++ +   Y 
Sbjct: 607 FHYYYESYRYFPSNIEVIEWLGAYCIDTQFCEKAIEYFERAALILPTQVKWQLMVASCYR 666

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
           + G Y  A+ +++++   + +     E +  LV     + L +
Sbjct: 667 RSGNYQKALEKYKVIHQKFPE---NVECLRFLVRLCTDMGLKE 706


>gi|196000837|ref|XP_002110286.1| hypothetical protein TRIADDRAFT_54126 [Trichoplax adhaerens]
 gi|190586237|gb|EDV26290.1| hypothetical protein TRIADDRAFT_54126 [Trichoplax adhaerens]
          Length = 1597

 Score = 39.3 bits (91), Expect = 0.62,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 46/126 (36%), Gaps = 20/126 (15%)

Query: 133  VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
            V +  G+   +  +         K       ++   Y N  + + AR +           
Sbjct: 1401 VLHYSGLCLYKQKQYNE-----AKSFFDNSLKLKRDYYNEDHFEIARTH----------H 1445

Query: 193  EVEIGRYYLKRGEYVAAIPRFQLVLA---NYSDAEHAEEAMARLVEAYVALALMDEAREV 249
            E  IGR Y  + +Y  +I  F   L     Y ++      +  L ++Y     +++ +  
Sbjct: 1446 E--IGRCYYIQKQYENSIKEFDEALRIRRKYYNSTQTLSTLIYLAKSYKNTGEVEKRKLA 1503

Query: 250  VSLIQE 255
            ++L++E
Sbjct: 1504 ITLLEE 1509


>gi|86160760|ref|YP_467545.1| hypothetical protein Adeh_4345 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85777271|gb|ABC84108.1| hypothetical protein Adeh_4345 [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 291

 Score = 39.3 bits (91), Expect = 0.62,   Method: Composition-based stats.
 Identities = 22/145 (15%), Positives = 45/145 (31%), Gaps = 25/145 (17%)

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ-RATKLMLQY 161
                G YQ A +     I+ +P            G      + D+  D+       +  
Sbjct: 78  SYLELGDYQSALAYYRRIISLHPGGPEAHEA---RG-----RLGDIFRDRYGDHLAAITQ 129

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
            + +     +SP                   ++E+ R YL    +  A    +++   + 
Sbjct: 130 YADVAGS--DSPDAP--------------RYQLEVAREYLALKRWEQARTEARILREKWP 173

Query: 222 DAEHAEEAMARLVEAYVALALMDEA 246
             E A+EA     +++      +EA
Sbjct: 174 THELADEAQLLTAQSWALERRDEEA 198


>gi|75812429|ref|YP_320048.1| TPR repeat-containing protein [Anabaena variabilis ATCC 29413]
 gi|75705185|gb|ABA24859.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
          Length = 306

 Score = 39.3 bits (91), Expect = 0.62,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 55/155 (35%), Gaps = 22/155 (14%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +F L+   ++   +LV     ++    L +V +        +  +  L   N+ +A E
Sbjct: 1   MNRFILSFSIAVTFAYLV----FAAPAHSLSTVKEPNAASVFLQSGIEKLLHGNYQEAIE 56

Query: 79  YFN-QCSRDFPFAG-VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            FN        FA   + + L            YQ A +   + +   P++     V+  
Sbjct: 57  NFNTAIEIQKDFAPAYSDRCL-----AYLELADYQSAIADCNQALKLTPDNIE---VHLN 108

Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            G++Y ++           +  +   ++++    +
Sbjct: 109 RGLAYYRL--------GEYRQAIADNNQVIVLKPD 135


>gi|325180730|emb|CCA15137.1| cell division cycle protein 16 putative [Albugo laibachii Nc14]
          Length = 769

 Score = 39.3 bits (91), Expect = 0.63,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 21/56 (37%), Gaps = 3/56 (5%)

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE---AMARLVEAYVALALMDEAR 247
           EIG  Y K+  Y +A+   Q  L    +    +     +  L  AY  L    EA 
Sbjct: 624 EIGVVYYKQKRYTSAVESLQEALQACPNTASKQTFSVTLFNLASAYRKLGRYQEAE 679


>gi|281345478|gb|EFB21062.1| hypothetical protein PANDA_003771 [Ailuropoda melanoleuca]
          Length = 405

 Score = 39.3 bits (91), Expect = 0.63,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 23/77 (29%), Gaps = 17/77 (22%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           Q   +  L     +V +Y  SP  +  +       + LA K         +R   V    
Sbjct: 1   QGKIEEALSAFQELVRKYPQSPRARYGKA---QCEDDLAEK---------RRSNEV---- 44

Query: 212 RFQLVLANYSDAEHAEE 228
             +  +  Y +     +
Sbjct: 45  -LRGAIETYQEVASLPD 60


>gi|255008442|ref|ZP_05280568.1| hypothetical protein Bfra3_04831 [Bacteroides fragilis 3_1_12]
 gi|313146167|ref|ZP_07808360.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313134934|gb|EFR52294.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 91

 Score = 39.3 bits (91), Expect = 0.63,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 34/92 (36%), Gaps = 11/92 (11%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
            L +     + G  ++A    +E++   P  K  D  YYL+G +Y ++           +
Sbjct: 3   QLKTIKELINQGDIEKALQALDEFLRTEPVGK--DEAYYLMGNAYRKL--------GDWQ 52

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
             L      +E   +SP    AR  V    N 
Sbjct: 53  KALNNYQSAIELNPDSP-ALQARKMVMDILNF 83


>gi|221123791|ref|XP_002167115.1| PREDICTED: similar to zinc finger, BED-type containing 4 [Hydra
            magnipapillata]
          Length = 2263

 Score = 39.3 bits (91), Expect = 0.63,   Method: Composition-based stats.
 Identities = 33/239 (13%), Positives = 71/239 (29%), Gaps = 65/239 (27%)

Query: 44   RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ--CSRDFPFAGVARKSLLMSA 101
            + +     T       +Y    ++ K+ +F +A EY+ Q        +    ++  + + 
Sbjct: 1734 QKLVYQDGTHSCIADLLYNLGDVYQKKGSFDQAIEYYRQSLMINKQLYQDDPQQV-VANI 1792

Query: 102  F-----VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ---- 152
            +       Y+ G+++QA    ++                       ++I+ +  DQ    
Sbjct: 1793 YNNLGAAYYAKGQHEQAIDSYDQ---------------------SLKIIKQIYKDQVLGV 1831

Query: 153  -------RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI--------- 196
                     T        + ++ Y  S                +   E  I         
Sbjct: 1832 AFSLNNLGVTYKARGEYDQAIKNYKQS----------LNIYKFIYQNETHITFADTLHNL 1881

Query: 197  GRYYLKRGEYVAAIPRFQLVLAN----YSDAEH--AEEAMARLVEAYVALALMDEAREV 249
            G  Y  + ++  AI  ++  L      Y D  H     ++  L  AY      D+A + 
Sbjct: 1882 GLVYADQNQHKLAINYYEESLKMKNIIYQDKPHPSISYSLNDLGLAYSEKKQYDQAIKY 1940



 Score = 36.2 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 45/300 (15%), Positives = 82/300 (27%), Gaps = 92/300 (30%)

Query: 29   SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-----------------EKAVLFLKEQ 71
            S+A C        +++  Y D+V   +   ++Y                     +F  + 
Sbjct: 1145 SVADCLNNLGTAYNAKGQYNDAVKWNKASLKIYKFIYQNEPHLCIANSLNNLGEVFRNQG 1204

Query: 72   NFSKAYEYFNQ---CSRDF----PFAGVARKSLLMSAFVQY-----SAGKYQQAASLGEE 119
             + KA + F +     + F    P + +A      S +        +  +Y QA    ++
Sbjct: 1205 QYEKAIKKFRKSLSIKKLFYKDEPHSDIA------SIYNNLGLVFGANEQYDQAIKCYKK 1258

Query: 120  YITQY-------PESKNVDYV-------------------YYLVGMSYAQMIRDVPYDQR 153
                Y       P    V  V                   YY   ++  +       +Q 
Sbjct: 1259 SKKIYQLVYKNEP-HPYVADVMNNLGIIYKSNLQYDQAIKYYRESLNIYKFFYQSDLNQS 1317

Query: 154  ATK----------------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
                                 L+Y +   E Y N  Y       +    N L       G
Sbjct: 1318 VADIYNNLGLFYIAKNDNDTALKYCNLSFEIY-NRIYQDKPHPNIAYSLNNL-------G 1369

Query: 198  RYYLKRGEYVAAIPRFQLVLAN----YSDAEH--AEEAMARLVEAYVALALMDEAREVVS 251
              Y  +  +  AI  F+  +      Y D  H    +++  L   Y  +    +A E   
Sbjct: 1370 LVYWAKEHFDNAINYFKESIKMKKLVYQDKNHPSVADSLNNLGSVYRNIGQCSKAMEYYK 1429


>gi|226320951|ref|ZP_03796499.1| tetratricopeptide repeat domain protein [Borrelia burgdorferi 29805]
 gi|226233653|gb|EEH32386.1| tetratricopeptide repeat domain protein [Borrelia burgdorferi 29805]
          Length = 1065

 Score = 39.3 bits (91), Expect = 0.63,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 44/220 (20%)

Query: 62   EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLG 117
            +  ++     NF ++ EY N       F   A+K    ++   +  ++   K +++    
Sbjct: 827  KAGIVSNNLGNFKQSEEYLNF------FNANAKKPNEIAIYNLSIAKFENNKLEESLETI 880

Query: 118  EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYV 175
             + I   P  +  +Y  YL      +            +  +   S ++E+     S Y+
Sbjct: 881  NKAIDLNP--EKSEY-LYLKASINLKK--------ENYQNAISLYSLVIEKNPENTSAYI 929

Query: 176  KGARFYVTVGRNQLAAKEVE-------------IGRYYLKRGEYVAAIPRFQLVLANYSD 222
              A+ Y   G    A   +E             +G  Y K   Y  AI  F+  + N   
Sbjct: 930  NLAKAYEKSGNKSQAISTLEKIINKNNKLALNNLGILYKKEKNYQKAIEIFEKAIIN--- 986

Query: 223  AEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQ 259
                 EA   L    + +     A++++     ++   P+
Sbjct: 987  --SDIEAKYNLATTLIEINDNTRAKDLLREYTKLKPNNPE 1024



 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 3/62 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y KA + LK++N+  A   ++      P       + +  A     +G   QA S  E+
Sbjct: 894 LYLKASINLKKENYQNAISLYSLVIEKNPEN---TSAYINLAKAYEKSGNKSQAISTLEK 950

Query: 120 YI 121
            I
Sbjct: 951 II 952


>gi|45655644|ref|YP_003453.1| thiol-disulfide interchange like protein [Leptospira interrogans
           serovar Copenhageni str. Fiocruz L1-130]
 gi|45602615|gb|AAS72090.1| thiol-disulfide interchange like protein [Leptospira interrogans
           serovar Copenhageni str. Fiocruz L1-130]
          Length = 357

 Score = 39.3 bits (91), Expect = 0.63,   Method: Composition-based stats.
 Identities = 17/153 (11%), Positives = 49/153 (32%), Gaps = 25/153 (16%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---------CSRDFPFAGVA 93
             +   +   D +  +  ++  V + + + +SKA ++F +           +        
Sbjct: 221 ENEYLENLTKDPQGIQTNFQAGVYYFEAKEYSKAIQFFQKAIDSNDSKNLEKKH------ 274

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
             +L          G ++ A S    Y+++YP    V  V +    +Y ++         
Sbjct: 275 -DALFNLGISYLEIGNFKLAISTFNSYLSKYPNGDLVS-VLFFRANAYEEL--------N 324

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
             +       +++E   +    +  +  +    
Sbjct: 325 LKEEAKADYKKVLELTLDPDEKQDLQMRIDSLN 357



 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 36/99 (36%), Gaps = 14/99 (14%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             +Q+  + +    +S   K          N         G  YL+ G +  AI  F   
Sbjct: 253 KAIQFFQKAI----DSNDSKNLEKKHDALFNL--------GISYLEIGNFKLAISTFNSY 300

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAR-EVVSLIQ 254
           L+ Y + +     +     AY  L L +EA+ +   +++
Sbjct: 301 LSKYPNGDLVS-VLFFRANAYEELNLKEEAKADYKKVLE 338



 Score = 36.2 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 2/70 (2%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLA--NYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
            + G YY +  EY  AI  FQ  +   +  + E   +A+  L  +Y+ +     A    +
Sbjct: 239 FQAGVYYFEAKEYSKAIQFFQKAIDSNDSKNLEKKHDALFNLGISYLEIGNFKLAISTFN 298

Query: 252 LIQERYPQGY 261
               +YP G 
Sbjct: 299 SYLSKYPNGD 308


>gi|37680187|ref|NP_934796.1| Flp pilus assembly protein TadD [Vibrio vulnificus YJ016]
 gi|37198934|dbj|BAC94767.1| Flp pilus assembly protein TadD [Vibrio vulnificus YJ016]
          Length = 246

 Score = 39.3 bits (91), Expect = 0.63,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 51/177 (28%), Gaps = 37/177 (20%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           KFA  +  S+    LVG    +S+               +   A    +   +  A   +
Sbjct: 2   KFASKLILSVVSILLVGCAAPASQ----------PSAESLNSLADTAFEYARYDSAKSKY 51

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE-------------YI----TQ 123
            Q    +P    AR   LM A +     +   A S  ++             +I      
Sbjct: 52  QQVLDVYPEQPHAR---LMLARIDLLQDRPHAAQSQLQQLLTENADNAAEAAFILGRYQL 108

Query: 124 YPESKNVDYVYYLVGMSYAQMIRD------VPYD-QRATKLMLQYMSRIVERYTNSP 173
                     Y   G++  +          +  D Q+ T    Q+  R +E   +S 
Sbjct: 109 NQGDALSASNYLQQGLALDEQHAGLHNLLAIALDEQQRTAQAKQHFLRAMELEPDSK 165


>gi|323498286|ref|ZP_08103288.1| tetratricopeptide repeat protein [Vibrio sinaloensis DSM 21326]
 gi|323316714|gb|EGA69723.1| tetratricopeptide repeat protein [Vibrio sinaloensis DSM 21326]
          Length = 389

 Score = 39.3 bits (91), Expect = 0.63,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 56/192 (29%), Gaps = 50/192 (26%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A  ++      +A + F Q   + P    A    L+S +      ++ +A          
Sbjct: 114 AKDYMVSGFLDRAEKIFEQLVEE-PDHREAALQQLVSIY--QQTREWSKAIH-------- 162

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPY-----------DQRATKLMLQYMSRIVERYTNS 172
                   Y   LV +   +M   + +           D    K   Q   + +      
Sbjct: 163 --------YATLLVKLGRKRMRNSIAHFWCELAMQEKADGNDAKAA-QNFKKALSEDPKC 213

Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
                A                  G+ YL+  +Y  AI   ++VL    D++   E +  
Sbjct: 214 VRASIAL-----------------GKSYLENEDYSNAIKYMEMVLE--QDSDFVSEVLPT 254

Query: 233 LVEAYVALALMD 244
           L E Y  L   D
Sbjct: 255 LAECYHHLGQED 266


>gi|194213450|ref|XP_001495951.2| PREDICTED: similar to Collagen prolyl 4-hydroxylase alpha III
           subunit [Equus caballus]
          Length = 548

 Score = 39.3 bits (91), Expect = 0.63,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 34/102 (33%), Gaps = 11/102 (10%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF--PFAGVA---- 93
             +  D+Y           + ++   +     ++  A  +  +    F   +        
Sbjct: 168 GSAVTDLYSPRRLFSLTADDCFQVGKVAYDMGDYYHAIPWLEEAVSLFRGSYGEWKTEDE 227

Query: 94  ---RKSLLMSAFVQYSAGKYQQAASLGEEYITQY-PESKNVD 131
                +L   AF  + AG    A SL  E++  Y P++K + 
Sbjct: 228 GSLEDALDHLAFAYFQAGNVSCALSLSREFL-LYSPDNKRMA 268


>gi|115528225|gb|AAI24850.1| LOC431836 protein [Xenopus laevis]
          Length = 508

 Score = 39.3 bits (91), Expect = 0.63,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 58/188 (30%), Gaps = 28/188 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           E     L     ++A  +++      P  +    +++ +  A      GK++ A      
Sbjct: 55  EMGRKLLAAGQLAEALTHYHAAVDGDPNNYLTYYKRAAVYLA-----MGKFRSALPDLSR 109

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            I   P+            ++      ++   Q   +   Q    +++   N+   +   
Sbjct: 110 AIQLKPDF-----------LAARLQRGNILLKQGDVQEARQDFLSVLQSSPNNEEAQSQL 158

Query: 180 FYVTVG-RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
             V    RN   A E        +R +Y  AI   + V+     +     A     E Y+
Sbjct: 159 ERVQEVERNVGGASEAY------ERRDYYGAIALLEKVIEF---SPWDPSARELRAECYL 209

Query: 239 ALALMDEA 246
            +  +  A
Sbjct: 210 QVGELSNA 217


>gi|91202536|emb|CAJ72175.1| unknown protein [Candidatus Kuenenia stuttgartiensis]
          Length = 312

 Score = 39.3 bits (91), Expect = 0.63,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 22/58 (37%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           VY     + +  ++ +A E F   + D+  +    +S L         G Y+QA    
Sbjct: 197 VYRLGDCYFQSGDYKEALEVFRHLNNDYLNSEYQLQSRLKMGECCAKLGDYKQARKTL 254



 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 42/131 (32%), Gaps = 44/131 (33%)

Query: 105 YSAGKYQQAASLGEE-------YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
           Y  G Y+ AASL  +       ++       N D++ Y +G  Y Q            K 
Sbjct: 168 YEQGDYKTAASLYGKGLDKSMPFL-------NEDFIVYRLGDCYFQS--------GDYKE 212

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQL-----AAKEVE----------------- 195
            L+    +   Y NS Y   +R  +     +L     A K +                  
Sbjct: 213 ALEVFRHLNNDYLNSEYQLQSRLKMGECCAKLGDYKQARKTLYSVIAQEGDCKTEEDKSC 272

Query: 196 IGRYYLKRGEY 206
           +   Y K G+Y
Sbjct: 273 VAESYFKIGDY 283


>gi|42525153|ref|NP_970533.1| hypothetical protein Bd3829 [Bdellovibrio bacteriovorus HD100]
 gi|39577364|emb|CAE81187.1| unknown protein [Bdellovibrio bacteriovorus HD100]
          Length = 251

 Score = 39.3 bits (91), Expect = 0.63,   Method: Composition-based stats.
 Identities = 20/153 (13%), Positives = 45/153 (29%), Gaps = 36/153 (23%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM--SAFVQ 104
            L+ +T    ++      ++   ++ ++ A   F +             S      A   
Sbjct: 121 VLNDLTYGNPEKAYINLGLVKFNQKEYAAARTSFGKVMD----------SQTDDCIANTY 170

Query: 105 Y-----SAGKYQQAASLGEEYI-----TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           Y         Y +AA   +  I       Y      D  +Y   +SY ++          
Sbjct: 171 YGRTFFEEKDYGRAAEALDRAIGFCQKNLY------DEPHYYSALSYYRLGEKS------ 218

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
               +     +++ Y    Y   A+  +++ R 
Sbjct: 219 --KSVARFEELIKYYPTGKYRDKAKGMLSLIRK 249


>gi|145495406|ref|XP_001433696.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124400815|emb|CAK66299.1| unnamed protein product [Paramecium tetraurelia]
          Length = 456

 Score = 39.3 bits (91), Expect = 0.64,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 69/236 (29%), Gaps = 57/236 (24%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
            + + + K  N+ KA E + +     + + +           A   Y    Y +A     
Sbjct: 129 NRGLAYDKMSNYHKAIEEYTKVFTIDKQY-YTSY-----FNRAIAYYKLKNYDRAVEDFS 182

Query: 119 EYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
             I   P     +Y   YY  G  Y ++   +    +      Q    +   Y     + 
Sbjct: 183 TVIEINP-----EYYMAYYHRGEIY-ELQNKMDQASKDYVRASQLEPCLTIPYPQFKKIP 236

Query: 177 G------ARFYVTVGR-----NQLAAK-------EVE------------------IGRYY 200
                  +  ++++       N LA         E+                   I   Y
Sbjct: 237 EKSSYETSYQHLSLAIQDQPDNILAYNNRGFVLFEMNQPLEALENYNKAIEIKPTIATLY 296

Query: 201 LKRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEAREVVSL 252
             RG     + +F+  + +YS       +  +A       Y  L   DEA++ + +
Sbjct: 297 YNRGNIAYFLNQFEKAIEDYSQTILIDPNYAKAYCNRGTIYKQLEKFDEAKKDIEI 352


>gi|332306165|ref|YP_004434016.1| Aspartyl/Asparaginyl beta-hydroxylase [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332173494|gb|AEE22748.1| Aspartyl/Asparaginyl beta-hydroxylase [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 389

 Score = 39.3 bits (91), Expect = 0.64,   Method: Composition-based stats.
 Identities = 17/132 (12%), Positives = 44/132 (33%), Gaps = 16/132 (12%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           + A+  L+     +A + F+      P      ++    A+       Y  + +  +  I
Sbjct: 12  QSAIGLLQNGKMQQARKAFDTLCHQAPQ---LTQAWFGLAYACSQLQDYPASIAAIDNVI 68

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
            + P++        +  +   +  + V  DQ   ++ L +    ++   N   +      
Sbjct: 69  QREPKN--------VKALI-FKADQLVYNDQE--RMALAFYEGALQLTANQQNLPDEIKR 117

Query: 182 VTVGRNQLAAKE 193
               +  LA +E
Sbjct: 118 --GLKRGLALRE 127


>gi|300864251|ref|ZP_07109131.1| Stress protein (modular protein) [Oscillatoria sp. PCC 6506]
 gi|300337716|emb|CBN54277.1| Stress protein (modular protein) [Oscillatoria sp. PCC 6506]
          Length = 656

 Score = 39.3 bits (91), Expect = 0.64,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 32/110 (29%), Gaps = 14/110 (12%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            +  L L++ ++  A   FNQ            ++ L         G   QA     + +
Sbjct: 430 NQGSLKLEKADYRGAIADFNQAVSL---NQNLPQAYLGLGISHSKLGDNYQAIQYYNQAL 486

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
                + N    Y+  G +Y +M           +       + +    N
Sbjct: 487 KF---NANFADAYFSRGQAYYEM--------GIKQKANADYEQTIRLNPN 525



 Score = 35.5 bits (81), Expect = 8.7,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 31/97 (31%), Gaps = 13/97 (13%)

Query: 71  QNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
            +  +A +Y+      +  FA     +        Y  G  Q+A +  E+ I   P    
Sbjct: 473 GDNYQAIQYYNQALKFNANFAD----AYFSRGQAYYEMGIKQKANADYEQTIRLNPN--- 525

Query: 130 VDYVY-YL-VGMSYAQMIRDVPYDQRATKLMLQYMSR 164
             Y   YL  G      I   P   +  +   +  S+
Sbjct: 526 --YALAYLERGAIRY-QIGSKPQGLQDFRQAAELFSK 559


>gi|256822126|ref|YP_003146089.1| TPR repeat-containing protein [Kangiella koreensis DSM 16069]
 gi|256795665|gb|ACV26321.1| TPR repeat-containing protein [Kangiella koreensis DSM 16069]
          Length = 391

 Score = 39.3 bits (91), Expect = 0.64,   Method: Composition-based stats.
 Identities = 26/199 (13%), Positives = 61/199 (30%), Gaps = 44/199 (22%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC--------SRDFPFAGVARKSLLMS 100
             ++       +Y+  + +     + +A   F +                       L++
Sbjct: 102 PQLSSDDRNTALYQLGLDYNAVGMYDRAVSLFTELLEDPEHKSESLH---------QLLN 152

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
            +       + QAA + E+  +   E ++    ++         + D    +   K  L 
Sbjct: 153 IY--QLTKDWDQAAKVAEQLQSSMGEEQSKPLAHF------YCELADQKRSEGDIKAALA 204

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
            + + +    +S      +                 G  YL++  +  AI  +Q +L   
Sbjct: 205 NLKKGLSINPDSVRASILQ-----------------GDIYLQQKSFKQAIKSYQRILK-- 245

Query: 221 SDAEHAEEAMARLVEAYVA 239
            D     EA+ ++ EAY  
Sbjct: 246 QDIAFLPEALPKIAEAYNE 264


>gi|218780013|ref|YP_002431331.1| hypothetical protein Dalk_2170 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218761397|gb|ACL03863.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 633

 Score = 39.3 bits (91), Expect = 0.64,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 41/119 (34%), Gaps = 5/119 (4%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
            F  A+   +G   Q ++ +      +    + +Y+  +L ++     +A  YFN+    
Sbjct: 482 IFLGALMARLGMLHQGAKYIQRGLTLEPDNYKGLYQMGMLLMRANKPEEALTYFNKSVEL 541

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK--NVDYVYYLVGMSYAQ 143
            P    A  ++          G  Q+A    +  I   P     + +Y   L  M   +
Sbjct: 542 EP--RYAP-AVHNQGLAYQVLGDQQKAQQCIKRSIELAPTDPRGHHNYAMLLKKMGDYE 597


>gi|147919209|ref|YP_687056.1| hypothetical protein RCIX2685 [uncultured methanogenic archaeon
           RC-I]
 gi|110622452|emb|CAJ37730.1| hypothetical protein RCIX2685 [uncultured methanogenic archaeon
           RC-I]
          Length = 365

 Score = 39.3 bits (91), Expect = 0.64,   Method: Composition-based stats.
 Identities = 16/122 (13%), Positives = 39/122 (31%), Gaps = 20/122 (16%)

Query: 71  QNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
            N  +A + F    +     P       +      + Y  G+  +A +  +  +   P+ 
Sbjct: 64  GNLEEAEKSFKDALRIDDKHPG------AHSDLGNLYYCLGRLDEALAELQRSLEIDPQQ 117

Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
                 +Y +G+ Y +M RD           ++ + + +    +      A       + 
Sbjct: 118 HL---AHYRLGLVYLRMDRD--------DEAIEELKKTISLKPSYADAYTALGRTYGLQG 166

Query: 188 QL 189
           +L
Sbjct: 167 RL 168


>gi|118387255|ref|XP_001026739.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89308506|gb|EAS06494.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 1417

 Score = 39.3 bits (91), Expect = 0.64,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 44/131 (33%), Gaps = 23/131 (17%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSR---DFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           + +K + F +  NF +A EYFN+      +         +     F      K  QA   
Sbjct: 12  LLQKGLEFQESGNFDEAVEYFNRVLNINLNH------EDANYNLGFTYEKQDKLDQALEC 65

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            ++ I+  P         Y+        I  V ++Q      ++++ + +E   N  Y  
Sbjct: 66  YKKVISINPS--------YIKA---YVSIARVYFNQDNLDESIKFLEKAIEIDPN--YA- 111

Query: 177 GARFYVTVGRN 187
            A   +     
Sbjct: 112 EAYERLGWVYE 122


>gi|332710566|ref|ZP_08430511.1| serine/threonine protein kinase [Lyngbya majuscula 3L]
 gi|332350621|gb|EGJ30216.1| serine/threonine protein kinase [Lyngbya majuscula 3L]
          Length = 726

 Score = 38.9 bits (90), Expect = 0.65,   Method: Composition-based stats.
 Identities = 25/206 (12%), Positives = 57/206 (27%), Gaps = 49/206 (23%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
             + +K +N+  A   F++  +  P +    ++     +  ++  +Y+ A    +  +  
Sbjct: 455 GNVQVKSKNYFDAIASFDKALKLKPDSY---QAWYRRGWALHNLRRYKAAVESYDRALDY 511

Query: 124 YPESKNVDYVYYLVG--MSYAQMIRDVPYDQRAT------------------------KL 157
            P S      +Y  G  +S  +  +D     +                          + 
Sbjct: 512 KPNS---AEAWYQRGNDLSNLRKYKDAAKSYQQAVQFQPNFYQAWYSWGNTLNQLGKYQE 568

Query: 158 MLQYMSRIVERYTNS-----------------PYVKGARFYVTVGRNQLAAKEVEIGRYY 200
            L    + V+    S                      A +     +++        G  +
Sbjct: 569 ALGSFDQAVKLQPKSYQAWYSRGWTLHQVQRYEDALEAYYKAIKLKSKPYQAWYSRGNTF 628

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHA 226
            K   Y  AI  +Q  +    D   A
Sbjct: 629 YKLERYKDAIASYQQAVNYKPDYSQA 654



 Score = 38.9 bits (90), Expect = 0.75,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 60/190 (31%), Gaps = 36/190 (18%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y       +   + +A   F+Q  +  P +    ++     +  +   +Y+ A     + 
Sbjct: 554 YSWGNTLNQLGKYQEALGSFDQAVKLQPKSY---QAWYSRGWTLHQVQRYEDALEAYYKA 610

Query: 121 ITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           I      K+  Y  +Y  G ++ ++ R         K  +    + V    +  Y +   
Sbjct: 611 IKL----KSKPYQAWYSRGNTFYKLER--------YKDAIASYQQAVNYKPD--YSQ--- 653

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                     A   +      +KR +Y  AI  +   +  Y    +  EA+     A   
Sbjct: 654 ----------AWYSLGNAL--VKRNKYKKAIAAYDKAVR-YQ--PNYREAIKARERANSE 698

Query: 240 LALMDEAREV 249
           L      +E+
Sbjct: 699 LEAQKREQEI 708


>gi|321465641|gb|EFX76641.1| hypothetical protein DAPPUDRAFT_54951 [Daphnia pulex]
          Length = 825

 Score = 38.9 bits (90), Expect = 0.65,   Method: Composition-based stats.
 Identities = 11/105 (10%), Positives = 34/105 (32%), Gaps = 10/105 (9%)

Query: 18  QLYKFALTIFFSIAVCFLVG--------WERQSSRDVYLDSVTDVRYQREVYEKAVLFLK 69
           ++    L +   +A+  +            +     +      +      ++    L   
Sbjct: 543 RMAMAHLNMGLVLALMGMKDEAIEVYRRCSQLDGSGLKDPRTHETTKISALFNLGRLHAD 602

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVARKSLL-MSAFVQYSAGKYQQA 113
           +  ++KA + +N+  +  P      +SL  M     +   + ++A
Sbjct: 603 DGQYTKAIDVYNEAIQRMP-THYQPQSLYNMLGEAYFKLDRLKEA 646


>gi|281353153|gb|EFB28737.1| hypothetical protein PANDA_003344 [Ailuropoda melanoleuca]
          Length = 456

 Score = 38.9 bits (90), Expect = 0.65,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 42/130 (32%), Gaps = 17/130 (13%)

Query: 11  IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKE 70
           + + +   +   A  +F  +A   +         D+Y           + ++   +    
Sbjct: 78  LQDVYMLNVKGLARGVFQRVAGSAVT--------DLYSPRRLFSLTADDCFQVGKVAYDM 129

Query: 71  QNFSKAYEYFNQCSRDF--PFAGVA-------RKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            ++  A  +  +    F   +             +L   AF  + AG    A SL  E++
Sbjct: 130 GDYYHAIPWLEEAVSLFRGSYGEWKTEDEASLEDALDHLAFAYFQAGNVSCALSLSREFL 189

Query: 122 TQYPESKNVD 131
              P++K + 
Sbjct: 190 LYSPDNKRMA 199


>gi|282879531|ref|ZP_06288262.1| tetratricopeptide repeat protein [Prevotella timonensis CRIS 5C-B1]
 gi|281306479|gb|EFA98508.1| tetratricopeptide repeat protein [Prevotella timonensis CRIS 5C-B1]
          Length = 232

 Score = 38.9 bits (90), Expect = 0.65,   Method: Composition-based stats.
 Identities = 23/138 (16%), Positives = 50/138 (36%), Gaps = 17/138 (12%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           +KA L L+ + +  A + ++Q  R  P        L   A+     G+Y  A    E  +
Sbjct: 58  KKAALNLQLEQWQYAKDEYDQVLRSHPDN---IAGLYYRAYANQQLGRYNFARLDYENLL 114

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              P   +       +G++            +     +  ++R+V ++ +S     AR  
Sbjct: 115 KVVPGHFSA-----QLGLALLNQKD------KHHTEAMNQINRLVNQFPDSAVAYAARAG 163

Query: 182 VTVGRNQLAAKEVEIGRY 199
           +   +  +   E+ +  Y
Sbjct: 164 MEQEQGMI---ELAVYDY 178


>gi|187934587|ref|YP_001885851.1| hypothetical protein [Clostridium botulinum B str. Eklund 17B]
 gi|187722740|gb|ACD23961.1| tetratricopeptide repeat protein [Clostridium botulinum B str.
           Eklund 17B]
          Length = 1094

 Score = 38.9 bits (90), Expect = 0.65,   Method: Composition-based stats.
 Identities = 29/228 (12%), Positives = 70/228 (30%), Gaps = 34/228 (14%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKE--QNFSKAYEYFNQC 83
            F ++  C+ +  +   + + Y   +        +Y +     +    +++KA E +   
Sbjct: 791 AFVNLGYCYGLLEDYTKAIECYTRGLEITGGNEYIYNQLGNLYENDLNDYNKAIENYKNV 850

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
            +  P     R      A        Y ++ +  E+ I     +    Y+Y  +G+ Y  
Sbjct: 851 MKLNP---EDRNGYSDIANCYRKLEDYSESLTYYEKQIE---ATGKTAYLYNCIGVLYEI 904

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
              +        +  ++   + VE          A   +     +      E  +YY K+
Sbjct: 905 RFENY-------EKAIENYKKAVELDPEHK---DAYKNIGDCYEKAWDNHEEAIKYYKKQ 954

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
            +Y+              D      ++    ++Y  L   + A+    
Sbjct: 955 EKYL-------------DDTRKI--SLEI-ADSYDQLGKTESAKNYYR 986


>gi|114051830|ref|NP_001040185.1| DnaJ (Hsp40) homolog 9 [Bombyx mori]
 gi|87248313|gb|ABD36209.1| DnaJ-like protein isoform A [Bombyx mori]
 gi|253721959|gb|ACT34043.1| DnaJ-9 [Bombyx mori]
 gi|257122608|gb|ACV41273.1| DNAJ9 [Bombyx mori]
          Length = 515

 Score = 38.9 bits (90), Expect = 0.65,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 53/159 (33%), Gaps = 19/159 (11%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++E A   L   ++ +     ++C     ++    K  L  A      G+ Q+A  +  +
Sbjct: 162 LHEDAQRALDANDYRRVVFCMDRCLD---YSPSCTKCKLTKAECLALLGRCQEAQEIAND 218

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +    +S++ +   Y+ G+      RD        +   ++  +++    +        
Sbjct: 219 LLRL--DSQDTE-AIYVRGLCLYFEDRD--------EQAFKHFQQVLRLNPDHKKAVETY 267

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
               + + +        G    K G +  A+  +   L 
Sbjct: 268 KRAKLLKQKKEE-----GNEAFKMGRWQQALALYNEALT 301


>gi|15605416|ref|NP_220202.1| TPR-motif-containing protein [Chlamydia trachomatis D/UW-3/CX]
 gi|76789423|ref|YP_328509.1| TPR repeat-containing protein [Chlamydia trachomatis A/HAR-13]
 gi|237805034|ref|YP_002889188.1| tetratricopeptide repeat protein [Chlamydia trachomatis
           B/TZ1A828/OT]
 gi|255311510|ref|ZP_05354080.1| tetratricopeptide repeat protein [Chlamydia trachomatis 6276]
 gi|255317812|ref|ZP_05359058.1| tetratricopeptide repeat protein [Chlamydia trachomatis 6276s]
 gi|3329135|gb|AAC68278.1| TPR-motif protein [Chlamydia trachomatis D/UW-3/CX]
 gi|76167953|gb|AAX50961.1| tetratricopeptide repeat family protein [Chlamydia trachomatis
           A/HAR-13]
 gi|231273334|emb|CAX10249.1| tetratricopeptide repeat protein [Chlamydia trachomatis
           B/TZ1A828/OT]
 gi|296437154|gb|ADH19324.1| tetratricopeptide repeat protein [Chlamydia trachomatis G/11222]
 gi|297748814|gb|ADI51360.1| Tetratricopeptide repeat family protein [Chlamydia trachomatis
           D-EC]
 gi|297749694|gb|ADI52372.1| Tetratricopeptide repeat family protein [Chlamydia trachomatis
           D-LC]
          Length = 335

 Score = 38.9 bits (90), Expect = 0.65,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 52/148 (35%), Gaps = 17/148 (11%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D    + +Y KAV+    ++   A +      +  P      K+ +   ++      + +
Sbjct: 141 DPWNPQGLYNKAVVLSDMEDEEGAIDLLESTVKRNPL-YW--KAWVKLGYLLSRNKIWDR 197

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A    E  +   P   ++   +Y +G+ Y  + +        T+L L+     +    N+
Sbjct: 198 ATEAYERVVQLRP---DLSDGHYNLGLCYLTLDK--------TRLALKAFQESLLL--NA 244

Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYY 200
                A FY+ +    L   E     +Y
Sbjct: 245 EDA-DAHFYIGLAHMDLKQNEQAYDAFY 271


>gi|50120884|ref|YP_050051.1| tetratricopeptide repeat protein [Pectobacterium atrosepticum
           SCRI1043]
 gi|49611410|emb|CAG74858.1| conserved hypothetical protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 389

 Score = 38.9 bits (90), Expect = 0.65,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 60/178 (33%), Gaps = 28/178 (15%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              ++    + +A E FNQ   +  F   A +  L+      +   +  A  + E+ +  
Sbjct: 114 GRDYMAAGLYDRAEEIFNQLVDEEDFRRSALQ-QLLQI--HQATSDWLTAIDVAEKLVKM 170

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
             +   VD  ++   ++   M  D   D       L ++                     
Sbjct: 171 GKDELRVDIAHFYCELALLAMGSD-DLD-----KALTFL-----------------KKGA 207

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
              NQ A   + +GR Y+ + +Y  A+   + VL    D E   E +  L E Y  L 
Sbjct: 208 SADNQCARASIMMGRIYMAQQDYSRAVEALRQVLD--QDKELVSETLPMLQECYQHLG 263


>gi|281212595|gb|EFA86755.1| tetratricopeptide-like helical domain-containing protein
           [Polysphondylium pallidum PN500]
          Length = 550

 Score = 38.9 bits (90), Expect = 0.66,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 23/67 (34%), Gaps = 7/67 (10%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            + +   ++  F +A + F +  R  P      + +S        Y   +Y  A    E+
Sbjct: 362 NQGIEHFRKHEFPEAIKSFEEAIRRNPVDHTIYSNRSA-----AYYKLTEYPLAVKDAEK 416

Query: 120 YITQYPE 126
            I   P 
Sbjct: 417 TIELAPN 423


>gi|257457386|ref|ZP_05622557.1| cyclic nucleotide-binding protein [Treponema vincentii ATCC 35580]
 gi|257445308|gb|EEV20380.1| cyclic nucleotide-binding protein [Treponema vincentii ATCC 35580]
          Length = 344

 Score = 38.9 bits (90), Expect = 0.66,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 42/86 (48%), Gaps = 1/86 (1%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           ++ A   +K++ ++ AY+ ++          +   + L +A   Y   +Y +   LG  +
Sbjct: 224 FQLAEDLVKQEKWADAYKQYHTIIEMKQGTKL-EAAYLGAARCLYKQAEYVRCIQLGTGF 282

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIR 146
           ITQ+P+S  +  +  L+G+ Y  M R
Sbjct: 283 ITQFPKSLKLAEILMLLGLCYQGMDR 308


>gi|255505888|ref|ZP_05348668.3| putative tetratricopeptide repeat-containing domain protein
           [Bryantella formatexigens DSM 14469]
 gi|255265370|gb|EET58575.1| putative tetratricopeptide repeat-containing domain protein
           [Bryantella formatexigens DSM 14469]
          Length = 493

 Score = 38.9 bits (90), Expect = 0.66,   Method: Composition-based stats.
 Identities = 10/75 (13%), Positives = 23/75 (30%), Gaps = 11/75 (14%)

Query: 61  YEKAVLFLKEQNFSKAYEYF----NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           Y +      + +++ A E            +        +    +F  Y+ G  + A   
Sbjct: 363 YNEGATAYAQGDYATAAEKLAQAVETDDNQY-------DAWYYLSFAYYNLGDTENADKA 415

Query: 117 GEEYITQYPESKNVD 131
            E+ I ++P      
Sbjct: 416 FEQTIQKFPAQAQAA 430


>gi|260806523|ref|XP_002598133.1| hypothetical protein BRAFLDRAFT_123282 [Branchiostoma floridae]
 gi|229283405|gb|EEN54145.1| hypothetical protein BRAFLDRAFT_123282 [Branchiostoma floridae]
          Length = 1925

 Score = 38.9 bits (90), Expect = 0.66,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 39/160 (24%), Gaps = 31/160 (19%)

Query: 101  AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
            A V      Y  A     + I   P+       YY     Y +    +        L L+
Sbjct: 1245 AEVYRKQDDYTSAIVNYTQAIKLQPDDHE---AYYYRAEMYEKKGDML--------LALE 1293

Query: 161  YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
              ++      +                         G YY   G ++ A+  F  +L   
Sbjct: 1294 DFAQATRLMPS---------RTEAVMKH--------GLYYFNNGNWIGAVNDFTALL--- 1333

Query: 221  SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
                +   A      AY        A E +S      P  
Sbjct: 1334 QQEPNNAIARTYRGRAYAQQGHYSSAVEDLSAAIHLDPNN 1373



 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 55/172 (31%), Gaps = 39/172 (22%)

Query: 106  SAGKYQQAASLGEEYITQ-------YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
             A ++++A    +  I          P       VYY +G+S+ ++ + +          
Sbjct: 1591 KAKQFEEAVGTYKRAIQLLTPWQAKQPMPWEAAEVYYYLGLSHLELFQYMD--------A 1642

Query: 159  LQYMSRIVERYTNSPYVKGARFY------------VTVGRNQLA------AKEVEIGRYY 200
            L+  +  ++   +  Y +                 +      LA         +    YY
Sbjct: 1643 LEAFNNALKVNPS--YAEAYYQRGLTRLRLKQSKGIQDFNRALALDPYIFQAFLSRAAYY 1700

Query: 201  LKRGEYVAAIPRFQLVLANYSDAEHA---EEAMARLVEAYVALALMDEAREV 249
              +G Y  AI      +    ++  A     A+   V+ Y  LA+ D ++  
Sbjct: 1701 GMKGRYTKAIMNCNEAIKLQPNSVRAYLYRGALKYYVKTY-KLAVKDLSKAA 1751


>gi|307152973|ref|YP_003888357.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822]
 gi|306983201|gb|ADN15082.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822]
          Length = 277

 Score = 38.9 bits (90), Expect = 0.66,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 81/249 (32%), Gaps = 53/249 (21%)

Query: 22  FALTIFFSIAVC---FLVGWERQSSRDVYLDSVTDVRYQR--EVYEKAVLFLKEQNFSKA 76
             LT+    +     F  G +   +  V   S+T+ + ++   + +KA     + +F  A
Sbjct: 7   ILLTVVLIWSGAGNEFRTGGQSAWAEPVVSSSITEQQIKQGEALAQKAFEATDKGDFPAA 66

Query: 77  YEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
            +Y+ Q    FP      + +        Q+      +A +   + I   P+S +     
Sbjct: 67  EQYWTQLIEQFPTNPAVWSNRGNCRV--SQFK---LDEAIADFNKAIELAPDSPDP---- 117

Query: 135 YL-VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
           YL  G ++    R            +   ++++    + P                    
Sbjct: 118 YLNRGTAFEAQERYS--------EAIADYNQVLALDPSDPMA------------------ 151

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSD----AEHAEEAMARLVEAYVALALMDEAREV 249
                 Y  RG    ++  +Q  LA+Y      A +   A A +  A       +EA   
Sbjct: 152 ------YNNRGNAQGSLGHWQEALADYQKAIDIAPNFSFAQANVALALYETGHKEEATRK 205

Query: 250 VSLIQERYP 258
           +  +  +YP
Sbjct: 206 MRSLVRKYP 214


>gi|134055728|emb|CAK44101.1| unnamed protein product [Aspergillus niger]
          Length = 756

 Score = 38.9 bits (90), Expect = 0.66,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 3/65 (4%)

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           YLK  ++ AA+   + VL   SD E +E+A+ R  +A   LA  +E+ +V  ++   +P 
Sbjct: 247 YLKTHQFDAALYDLKTVL---SDQESSEKALFRKSQALYHLARFEESCKVHQVLFATFPN 303

Query: 260 GYWAR 264
              A+
Sbjct: 304 NTAAK 308


>gi|47124915|gb|AAH70700.1| LOC431836 protein [Xenopus laevis]
          Length = 505

 Score = 38.9 bits (90), Expect = 0.66,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 58/188 (30%), Gaps = 28/188 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           E     L     ++A  +++      P  +    +++ +  A      GK++ A      
Sbjct: 52  EMGRKLLAAGQLAEALTHYHAAVDGDPNNYLTYYKRAAVYLA-----MGKFRSALPDLSR 106

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            I   P+            ++      ++   Q   +   Q    +++   N+   +   
Sbjct: 107 AIQLKPDF-----------LAARLQRGNILLKQGDVQEARQDFLSVLQSSPNNEEAQSQL 155

Query: 180 FYVTVG-RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
             V    RN   A E        +R +Y  AI   + V+     +     A     E Y+
Sbjct: 156 ERVQEVERNVGGASEAY------ERRDYYGAIALLEKVIEF---SPWDPSARELRAECYL 206

Query: 239 ALALMDEA 246
            +  +  A
Sbjct: 207 QVGELSNA 214


>gi|34541550|ref|NP_906029.1| TPR domain-containing protein [Porphyromonas gingivalis W83]
 gi|34397867|gb|AAQ66928.1| TPR domain protein [Porphyromonas gingivalis W83]
          Length = 1160

 Score = 38.9 bits (90), Expect = 0.66,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 30/72 (41%)

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
             +  +  ++  +   ++ +L  Y + E   + + RL   Y  +    EA    +LI + 
Sbjct: 612 AVFNERMEKFDESADTYETLLRRYPNYEKKMDVLYRLFMLYTRMNNKPEAERCRALILQY 671

Query: 257 YPQGYWARYVET 268
           YP+   A+ +  
Sbjct: 672 YPEDNLAKALSN 683


>gi|190574022|ref|YP_001971867.1| putative transmembrane protein [Stenotrophomonas maltophilia K279a]
 gi|190011944|emb|CAQ45565.1| putative transmembrane protein [Stenotrophomonas maltophilia K279a]
          Length = 212

 Score = 38.9 bits (90), Expect = 0.66,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 34/90 (37%), Gaps = 6/90 (6%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
            +IA+  + GW+         D    +      Y+KA++ L++     A +         
Sbjct: 31  VAIAIGAIAGWQW-----YQKDQGGKLASANVEYQKALVGLQQNKLDDAAKAVKALEA-G 84

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           P +     + L  A  Q  AGK ++A +  
Sbjct: 85  PSSIYGDLAALQLAKAQVDAGKNEEALATL 114


>gi|150402041|ref|YP_001329335.1| hypothetical protein MmarC7_0114 [Methanococcus maripaludis C7]
 gi|150033071|gb|ABR65184.1| TPR repeat-containing protein [Methanococcus maripaludis C7]
          Length = 602

 Score = 38.9 bits (90), Expect = 0.66,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 50/144 (34%), Gaps = 42/144 (29%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA--------------RKSL------LMS- 100
           +  + +    NF K+ E F++  R  P+   A               K++      L   
Sbjct: 33  DSGLEYFGNGNFEKSIESFDETLRINPYNMEALVSKGYILYAINESEKAIECFDKALEIN 92

Query: 101 ----------AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
                      +  +   +Y++A    ++ +  Y E+     VYY+ G S   + R    
Sbjct: 93  SDYYDTWQYKGYALHDLERYEEAIECFDKSLEIYEENPE---VYYMKGASLYGLER---- 145

Query: 151 DQRATKLMLQYMSRIVERYTNSPY 174
                +  ++ +   +E Y N+ Y
Sbjct: 146 ----YEEAIECLDIALETYPNNIY 165


>gi|311748682|ref|ZP_07722467.1| gliding motility-related protein TPR repeat-containing protein
           [Algoriphagus sp. PR1]
 gi|126577215|gb|EAZ81463.1| gliding motility-related protein TPR repeat-containing protein
           [Algoriphagus sp. PR1]
          Length = 874

 Score = 38.9 bits (90), Expect = 0.66,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 51/173 (29%), Gaps = 19/173 (10%)

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
            +   + +Q+    E  + QYPES      YYL+ ++          D+       QY+S
Sbjct: 551 YFDLEEIEQSIDNLETLVRQYPESSRKPEAYYLLYLA--------QKDRGGNFQ--QYVS 600

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLA------AKEVEIGRYYLKRGEYVAAIPRFQLVL 217
           R+   +  S Y              LA        E     YY   G +  A    Q  L
Sbjct: 601 RLNNEFPGSQYTYSVNNP-DAASGNLAYLASSKRYESAYEAYYD--GNFNNARTIIQQTL 657

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
             Y    + E  +   +     L      RE +    +             ++
Sbjct: 658 EEYPLTRNTERLLLLDIMVTGKLESRQSYREKLESYIQNSKDEELKDLARNML 710


>gi|219850611|ref|YP_002465044.1| TPR repeat-containing serine/threonine protein kinase [Chloroflexus
           aggregans DSM 9485]
 gi|219544870|gb|ACL26608.1| serine/threonine protein kinase with TPR repeats [Chloroflexus
           aggregans DSM 9485]
          Length = 863

 Score = 38.9 bits (90), Expect = 0.66,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 40/123 (32%), Gaps = 16/123 (13%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +     ++ Y   +   A    ++ +   P+           G++   + R + +D    
Sbjct: 639 AQAALGWLAYRDDQTDAAKQAFQQALQLNPKE----------GLALFGLGR-LAFDDENF 687

Query: 156 KLMLQYMSRIVERYTN--SPYVKGARFYVTVGRNQLAAKEVEIGRYYLK-RGEYVAAIPR 212
           +  L Y  + ++   +  S Y       +  G    A  E   G +Y +    Y  A+ R
Sbjct: 688 EQALDYFQQTIDANPDFASAYAYLGETKLFTGFQN-ADNE-TAGDWYSQAEEAYREALNR 745

Query: 213 FQL 215
              
Sbjct: 746 NDY 748


>gi|312148550|gb|ADQ31209.1| Surface-located membrane protein 1 (LMP1) [Borrelia burgdorferi JD1]
          Length = 1065

 Score = 38.9 bits (90), Expect = 0.67,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 44/220 (20%)

Query: 62   EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLG 117
            +  ++     NF ++ EY N       F   A+K    ++   +  ++   K +++    
Sbjct: 827  KAGIVSNNLGNFKQSEEYLNF------FNANAKKPNEIAIYNLSIAKFENNKLEESLETI 880

Query: 118  EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYV 175
             + I   P  +  +Y  YL      +            +  +   S ++E+     S Y+
Sbjct: 881  NKAIDLNP--EKSEY-LYLKASINLKK--------ENYQNAISLYSLVIEKNPENTSAYI 929

Query: 176  KGARFYVTVGRNQLAAKEVE-------------IGRYYLKRGEYVAAIPRFQLVLANYSD 222
              A+ Y   G    A   +E             +G  Y K   Y  AI  F+  + N   
Sbjct: 930  NLAKAYEKSGNKSQAISTLEKIINKNNKLALNNLGILYKKEKNYQKAIEIFEKAIIN--- 986

Query: 223  AEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQ 259
                 EA   L    + +     A++++     ++   P+
Sbjct: 987  --SDIEAKYNLATTLIEINDNTRAKDLLREYTKLKPNNPE 1024



 Score = 37.8 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 3/62 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y KA + LK++N+  A   ++      P       + +  A     +G   QA S  E+
Sbjct: 894 LYLKASINLKKENYQNAISLYSLVIEKNPEN---TSAYINLAKAYEKSGNKSQAISTLEK 950

Query: 120 YI 121
            I
Sbjct: 951 II 952


>gi|258591587|emb|CBE67888.1| exported protein of unknown function [NC10 bacterium 'Dutch
           sediment']
          Length = 181

 Score = 38.9 bits (90), Expect = 0.67,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 60/181 (33%), Gaps = 32/181 (17%)

Query: 21  KFALTIFFSIAVCFLVGWERQS---------SRDVYLDSVTDVR-YQREV---YEKAVLF 67
           +  + +  ++AV FL+G+   +         S  V   +    +    E+    + A   
Sbjct: 11  RLIIMLGSTLAVGFLLGYLASAFVPLVQSPQSPAVSPSAAPGPKLSPSEIDSALKAAHAS 70

Query: 68  LKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
           L   +   A+E ++Q     R+        ++L     +   + +  +A  L +  ++  
Sbjct: 71  LDAGDLQAAWEKYHQILLTDRNH------IEALTHLGVILTQSNQPDEAIKLYDRALSLN 124

Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
           P+     Y +    +           D +    + Q    +V    +S   K  + ++  
Sbjct: 125 PQ-----YAH---ALFDKGQALQAKGDAKGATEVFQRFLALVP--PDSDDAKRVKGWIAE 174

Query: 185 G 185
            
Sbjct: 175 L 175


>gi|220934586|ref|YP_002513485.1| hypothetical protein Tgr7_1413 [Thioalkalivibrio sp. HL-EbGR7]
 gi|219995896|gb|ACL72498.1| hypothetical protein Tgr7_1413 [Thioalkalivibrio sp. HL-EbGR7]
          Length = 236

 Score = 38.9 bits (90), Expect = 0.67,   Method: Composition-based stats.
 Identities = 14/97 (14%), Positives = 31/97 (31%), Gaps = 13/97 (13%)

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            E     +    +   A        F  +  G+  ++ ++ E+ +   P +    Y +YL
Sbjct: 141 AERIEAAATQH-YNRWA--------FRLHQEGQDARSLAVVEKSLAHNPRN---AYAHYL 188

Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
            G+ + +   D   D R  +       R +       
Sbjct: 189 RGLIHHKA-GDRQRDLRLLREAKAAYERALSLDPGHQ 224


>gi|169608656|ref|XP_001797747.1| hypothetical protein SNOG_07413 [Phaeosphaeria nodorum SN15]
 gi|160701690|gb|EAT84879.2| hypothetical protein SNOG_07413 [Phaeosphaeria nodorum SN15]
          Length = 818

 Score = 38.9 bits (90), Expect = 0.67,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 49/134 (36%), Gaps = 30/134 (22%)

Query: 69  KEQNFS---KAYEYFNQCSRDFP--FAGVARKSLL----------MSAFVQYSAGKYQQA 113
           +  N++   +A EY  + S+ +P  +    ++++               + Y   +Y+ A
Sbjct: 258 QSTNYTSQEQAIEYLEK-SQKYPKAYEAY-QQAVYRDGRNPTFWCSIGVLYYQINQYRDA 315

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
                  I   P   N+  V+Y +G +  +   +   D       L    R  +   ++ 
Sbjct: 316 LDAYSRAIRLNP---NISEVWYDLG-TLYESCNNQTAD------ALDAYQRAADLDPSNV 365

Query: 174 YVKGARFYVTVGRN 187
           ++   +  + + +N
Sbjct: 366 HI---KARLQLLQN 376


>gi|126337335|ref|XP_001366332.1| PREDICTED: similar to p58 [Monodelphis domestica]
          Length = 504

 Score = 38.9 bits (90), Expect = 0.67,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 36/114 (31%), Gaps = 4/114 (3%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG-VARKSLLMSAFVQYSAGKYQQAASL 116
            ++ E A   ++E  +  A   +    +  P       +S            K  +A   
Sbjct: 269 NKLIESAEELIREGRYVDAVSKYESVMKTEPNTPVYTIRSKERICHCFSKDEKPVEAIKA 328

Query: 117 GEEYITQYPESKNV--DYVY-YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
             E +   P + N   D    YL+   Y + I+D    Q   +   Q    + +
Sbjct: 329 CSEVLQLEPANVNALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQQIREGLEK 382


>gi|73965122|ref|XP_849894.1| PREDICTED: similar to Cell division cycle protein 27 homolog
           (CDC27Hs) (H-NUC) isoform 2 [Canis familiaris]
          Length = 831

 Score = 38.9 bits (90), Expect = 0.67,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 593 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 642

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178
           N    +Y +GM Y +  +     +   +  L    +          +      S      
Sbjct: 643 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 698

Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                V   +N L               +Y +A+   + +                + + 
Sbjct: 699 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 753

Query: 237 YVALALMDEA 246
           Y  L     A
Sbjct: 754 YKKLGQTHLA 763


>gi|15642937|ref|NP_227978.1| hypothetical protein TM0163 [Thermotoga maritima MSB8]
 gi|4980657|gb|AAD35256.1|AE001701_9 hypothetical protein TM_0163 [Thermotoga maritima MSB8]
          Length = 278

 Score = 38.9 bits (90), Expect = 0.67,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 24/74 (32%), Gaps = 13/74 (17%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFN-------QCSRDFPFAGVARKSLLMSAFVQYS 106
           V    ++Y  A+    E ++ +A E F              P         L      Y+
Sbjct: 17  VSVANDLYSSALSAYLEGDYRRALELFENALREDPTIEERDP------LVKLKMGICAYA 70

Query: 107 AGKYQQAASLGEEY 120
            G Y++A +    +
Sbjct: 71  IGDYEKARAYLSNF 84


>gi|78050040|ref|YP_366215.1| polysaccharide deacetylase precursor [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78038470|emb|CAJ26215.1| Polysaccharide deacetylase precursor [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 900

 Score = 38.9 bits (90), Expect = 0.67,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 40/126 (31%), Gaps = 18/126 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           E+ +   KE+ ++ A E F +  +  P    A  +     FV Y  G++ ++A   E  +
Sbjct: 791 ERGLQLYKEKRYADAAEQFAEALKLRP--DFA-LAANNLGFVYYRQGRFAESARWLENTL 847

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPY--DQRATKLMLQYMSRIVERYTNSPYVKGAR 179
              P             ++Y  +        D+   +        +          + AR
Sbjct: 848 KIDPS----------RAVAYLNLGDAYAKAGDRDKARKAYATYLELQ---PQGSGAEQAR 894

Query: 180 FYVTVG 185
             +   
Sbjct: 895 AQLQSL 900


>gi|116204629|ref|XP_001228125.1| hypothetical protein CHGG_10198 [Chaetomium globosum CBS 148.51]
 gi|88176326|gb|EAQ83794.1| hypothetical protein CHGG_10198 [Chaetomium globosum CBS 148.51]
          Length = 883

 Score = 38.9 bits (90), Expect = 0.67,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 46/140 (32%), Gaps = 22/140 (15%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSA 107
             D    +  Y     +++ Q + KAYE + Q        P              + Y  
Sbjct: 287 AADNSDAQSWYLLGRCYMQMQKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQI 340

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +Y+ A       I   P    +  V+Y +G +  +   +   D       L    R  E
Sbjct: 341 NQYRDALDAYSRAIRLNP---WISEVWYDLG-TLYESCNNQIAD------ALDAYQRAAE 390

Query: 168 RYTNSPYVKGARFYVTVGRN 187
              ++P++   +  + + RN
Sbjct: 391 LDPSNPHI---KTRLQLLRN 407


>gi|303240066|ref|ZP_07326587.1| TPR repeat-containing protein [Acetivibrio cellulolyticus CD2]
 gi|302592335|gb|EFL62062.1| TPR repeat-containing protein [Acetivibrio cellulolyticus CD2]
          Length = 245

 Score = 38.9 bits (90), Expect = 0.67,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 29/80 (36%), Gaps = 8/80 (10%)

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
            +  Y +G+Y +A    +  +    +    D  YY +  S+               L  +
Sbjct: 167 GYDNYKSGQYDKAIDNLQNSLKLTDKEYYSDDCYYFIAYSHLNKDNKY--------LAKE 218

Query: 161 YMSRIVERYTNSPYVKGARF 180
            M+ ++ +Y +S Y   A  
Sbjct: 219 TMNNLLTKYPDSTYKNDATE 238



 Score = 35.5 bits (81), Expect = 7.7,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 38/101 (37%), Gaps = 1/101 (0%)

Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRY-YLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
           S         ++   N+ A+ E  I  Y   K G+Y  AI   Q  L       ++++  
Sbjct: 141 SKNALDMYNNLSALSNKKASLEFYIDGYDNYKSGQYDKAIDNLQNSLKLTDKEYYSDDCY 200

Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
             +  +++       A+E ++ +  +YP   +       +K
Sbjct: 201 YFIAYSHLNKDNKYLAKETMNNLLTKYPDSTYKNDATEFLK 241


>gi|296436226|gb|ADH18400.1| tetratricopeptide repeat protein [Chlamydia trachomatis G/9768]
 gi|296438086|gb|ADH20247.1| tetratricopeptide repeat protein [Chlamydia trachomatis G/11074]
 gi|297140587|gb|ADH97345.1| tetratricopeptide repeat protein [Chlamydia trachomatis G/9301]
          Length = 335

 Score = 38.9 bits (90), Expect = 0.67,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 52/148 (35%), Gaps = 17/148 (11%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D    + +Y KAV+    ++   A +      +  P      K+ +   ++      + +
Sbjct: 141 DPWNPQGLYNKAVVLSDMEDEEGAIDLLESTVKRNPL-YW--KAWVKLGYLLSRNKIWDR 197

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A    E  +   P   ++   +Y +G+ Y  + +        T+L L+     +    N+
Sbjct: 198 ATEAYERVVQLRP---DLSDGHYNLGLCYLTLDK--------TRLALKAFQESLLL--NA 244

Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYY 200
                A FY+ +    L   E     +Y
Sbjct: 245 EDA-DAHFYIGLAHMDLKQNEQAYDAFY 271


>gi|296201741|ref|XP_002748164.1| PREDICTED: cell division cycle protein 27 homolog isoform 2
           [Callithrix jacchus]
          Length = 830

 Score = 38.9 bits (90), Expect = 0.67,   Method: Composition-based stats.
 Identities = 22/190 (11%), Positives = 47/190 (24%), Gaps = 38/190 (20%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 592 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 641

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178
           N    +Y +GM Y +  +     +   +  L    +          +      S      
Sbjct: 642 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 697

Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                +   +N L               +Y +A+   + +                + + 
Sbjct: 698 LNKAIIIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 752

Query: 237 YVALALMDEA 246
           Y  L     A
Sbjct: 753 YKKLGQTHLA 762


>gi|255349073|ref|ZP_05381080.1| tetratricopeptide repeat protein [Chlamydia trachomatis 70]
 gi|255503611|ref|ZP_05382001.1| tetratricopeptide repeat protein [Chlamydia trachomatis 70s]
 gi|255507290|ref|ZP_05382929.1| tetratricopeptide repeat protein [Chlamydia trachomatis D(s)2923]
 gi|289525727|emb|CBJ15208.1| tetratricopeptide repeat protein [Chlamydia trachomatis Sweden2]
 gi|296435297|gb|ADH17475.1| tetratricopeptide repeat protein [Chlamydia trachomatis E/150]
 gi|296439015|gb|ADH21168.1| tetratricopeptide repeat protein [Chlamydia trachomatis E/11023]
          Length = 335

 Score = 38.9 bits (90), Expect = 0.67,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 52/148 (35%), Gaps = 17/148 (11%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D    + +Y KAV+    ++   A +      +  P      K+ +   ++      + +
Sbjct: 141 DPWNPQGLYNKAVVLSDMEDEEGAIDLLESTVKRNPL-YW--KAWVKLGYLLSRNKIWDR 197

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A    E  +   P   ++   +Y +G+ Y  + +        T+L L+     +    N+
Sbjct: 198 ATEAYERVVQLRP---DLSDGHYNLGLCYLTLDK--------TRLALKAFQESLLL--NA 244

Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYY 200
                A FY+ +    L   E     +Y
Sbjct: 245 EDA-DAHFYIGLAHMDLKQNEQAYDAFY 271


>gi|195037969|ref|XP_001990433.1| GH18243 [Drosophila grimshawi]
 gi|193894629|gb|EDV93495.1| GH18243 [Drosophila grimshawi]
          Length = 281

 Score = 38.9 bits (90), Expect = 0.67,   Method: Composition-based stats.
 Identities = 21/145 (14%), Positives = 44/145 (30%), Gaps = 15/145 (10%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAG 108
             +     ++  +     K    ++A E + +     P +    +++L    A  +    
Sbjct: 102 AANKEQADKLKLEGNELFKNDEPARAVEIYTEALNICPSSNSKERAVLFGNRAAAKMKLE 161

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
             + A     + I  YPE        Y+  +   +  +    D R     L    R+ E 
Sbjct: 162 ANKSAIDDCTKAIDLYPE--------YVRAL--LRRAKLYEQDDRP-DEALADYKRVNEI 210

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKE 193
                  + A+  +    N  A  E
Sbjct: 211 DPGQREAREAQARLPAVIN--ARNE 233


>gi|189425152|ref|YP_001952329.1| hypothetical protein Glov_2093 [Geobacter lovleyi SZ]
 gi|189421411|gb|ACD95809.1| TPR repeat-containing protein [Geobacter lovleyi SZ]
          Length = 1714

 Score = 38.9 bits (90), Expect = 0.67,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 25/70 (35%), Gaps = 3/70 (4%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
              E+Y    + L +++         +  +  P    A     + A      G+ ++A S
Sbjct: 606 SPEELYSSGAVALNDEDPEYTIRLLTELLKREPAHYEAIN---LLAGAYKKLGQLEKAIS 662

Query: 116 LGEEYITQYP 125
           +    + +YP
Sbjct: 663 MYRAGVRRYP 672


>gi|158517895|ref|NP_001028509.2| tetratricopeptide repeat protein 38 [Mus musculus]
 gi|172044084|sp|A3KMP2|TTC38_MOUSE RecName: Full=Tetratricopeptide repeat protein 38; Short=TPR repeat
           protein 38
 gi|148672473|gb|EDL04420.1| mCG11996, isoform CRA_a [Mus musculus]
 gi|161899631|gb|AAI32622.2| Tetratricopeptide repeat domain 38 [Mus musculus]
 gi|161899632|gb|AAI32624.2| Tetratricopeptide repeat domain 38 [Mus musculus]
          Length = 465

 Score = 38.9 bits (90), Expect = 0.67,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 43/123 (34%), Gaps = 19/123 (15%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA---- 101
           V L     +  + +++  AV    + NF +A + + Q  RD P          M A    
Sbjct: 93  VELSQTQTLTPREQLHVSAVEMFAKGNFPRACDLWEQILRDHPTD--------MLALKFS 144

Query: 102 -FVQYSAGKYQQAASLGEEYITQYPE-SKNVDYVYYLVGMSYAQMIRDVPYD--QRATKL 157
               +  G  +Q           YP  + ++    Y+ G+    ++    YD  Q+  K 
Sbjct: 145 HDAYFYLGYQEQMRDSVAR---VYPFWTPDIPLNSYVKGIYSFGLMETNFYDQAQKLAKE 201

Query: 158 MLQ 160
            L 
Sbjct: 202 ALS 204


>gi|116748175|ref|YP_844862.1| N-acetylmuramoyl-L-alanine amidase [Syntrophobacter fumaroxidans
           MPOB]
 gi|116697239|gb|ABK16427.1| N-acetylmuramoyl-L-alanine amidase [Syntrophobacter fumaroxidans
           MPOB]
          Length = 484

 Score = 38.9 bits (90), Expect = 0.67,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 40/112 (35%), Gaps = 11/112 (9%)

Query: 71  QNFSKA---YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
             ++ A      + +  + +       ++ L      +   +  Q  +   E + Q    
Sbjct: 25  GAYAAADPVERQYQEVLKRY-------RAALSDPETTHRLRELDQCIAGLREVMRQDTRE 77

Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           K  D  +YL+G  Y     D   D+   +   +    +V+++ +SP    A+
Sbjct: 78  KLGDRSHYLLGQCYHARY-DATRDRDDFRSAQENYRSVVQKHHDSPLADDAQ 128


>gi|241205407|ref|YP_002976503.1| FecR protein [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240859297|gb|ACS56964.1| FecR protein [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 1237

 Score = 38.9 bits (90), Expect = 0.68,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 29/86 (33%), Gaps = 6/86 (6%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G  +++  ++      D  +   +  +   +L+     KA +     S   P      +S
Sbjct: 494 GRMKEAKHEIDTAIALDPSFDIALLARGRYYLQTGERDKALQDLLAASTANPAHS---QS 550

Query: 97  LLMSAFVQYSAGK---YQQAASLGEE 119
            LM A   Y  G     QQA    + 
Sbjct: 551 QLMLAAAHYEKGDRIPSQQALDNADR 576


>gi|220922903|ref|YP_002498205.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
           nodulans ORS 2060]
 gi|219947510|gb|ACL57902.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
           nodulans ORS 2060]
          Length = 784

 Score = 38.9 bits (90), Expect = 0.68,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 37/90 (41%), Gaps = 12/90 (13%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAA 114
             + Y +   F  +  + +A   ++Q  R  P +      + L       Y  G+Y +A 
Sbjct: 26  ATDYYNRGDAFRSKGEYDRAIADYDQALRLDPKSAVAYTHRGL-----AFYRKGEYDRAI 80

Query: 115 SLGEEYITQYPESKNVDYVYYL-VGMSYAQ 143
           +  ++ +   P+  N+    Y+  G+++ +
Sbjct: 81  ADYDQALRLDPKYANI----YINRGLAFYR 106


>gi|156973903|ref|YP_001444810.1| hypothetical protein VIBHAR_01613 [Vibrio harveyi ATCC BAA-1116]
 gi|156525497|gb|ABU70583.1| hypothetical protein VIBHAR_01613 [Vibrio harveyi ATCC BAA-1116]
          Length = 188

 Score = 38.9 bits (90), Expect = 0.68,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 46/130 (35%), Gaps = 15/130 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            Q   D+   +R     +    +  + Y +S Y               A     +G+ Y 
Sbjct: 74  YQDAVDLILKKRDYTGAIAAFQQFQKDYPDSTYS--------------ANSHYWLGQLYF 119

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + +   A+  F  V+ +Y D+    +A+ +L +          A++    + + YP   
Sbjct: 120 AKKQDKEAVKSFAAVV-SYKDSNKRADALVKLGDIAERNKNDAHAKKYYQQVVDEYPGSA 178

Query: 262 WARYVETLVK 271
            A+   + +K
Sbjct: 179 SAKVAGSKLK 188



 Score = 38.9 bits (90), Expect = 0.77,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 41/124 (33%), Gaps = 23/124 (18%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               Y  A +  +++   YP+S      +Y +G  Y    +D        K  ++  + +
Sbjct: 83  KKRDYTGAIAAFQQFQKDYPDSTYSANSHYWLGQLYFAKKQD--------KEAVKSFAAV 134

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           V  Y +S     A   +     +    +    +YY             Q V+  Y  +  
Sbjct: 135 VS-YKDSNKRADALVKLGDIAER-NKNDAHAKKYY-------------QQVVDEYPGSAS 179

Query: 226 AEEA 229
           A+ A
Sbjct: 180 AKVA 183


>gi|158520926|ref|YP_001528796.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
 gi|158509752|gb|ABW66719.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
          Length = 303

 Score = 38.9 bits (90), Expect = 0.68,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 32/85 (37%), Gaps = 9/85 (10%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           +YEKAV   +     +A E  N      P +     +++           +Y +A +   
Sbjct: 192 LYEKAVQMRQTGRTKEAIEALNTVIAGNPTYLAYFERAM-----AYMEQDRYHEAIADFN 246

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQ 143
           + +   P+ +      +  GM+Y +
Sbjct: 247 QTLKVEPKMRG---ALFGRGMAYLK 268


>gi|126179259|ref|YP_001047224.1| TPR repeat-containing protein [Methanoculleus marisnigri JR1]
 gi|125862053|gb|ABN57242.1| Tetratricopeptide TPR_2 repeat protein [Methanoculleus marisnigri
           JR1]
          Length = 1069

 Score = 38.9 bits (90), Expect = 0.68,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 21/70 (30%), Gaps = 3/70 (4%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
                     +Y K    L    +++A E F       P    A  S           G+
Sbjct: 483 QGAGGAEPHLLYRKGAALLHIGRYTEAVEAFEALLNVNPADAAAENSRGE---ALVHLGR 539

Query: 110 YQQAASLGEE 119
           Y++A +  + 
Sbjct: 540 YEEALACYDR 549



 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 38/121 (31%), Gaps = 22/121 (18%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
              +       +I+     S              + L+     IG  YL +G+Y  A+  
Sbjct: 164 GDFREAAACFEKILRTNPGS-------------TDLLSR----IGAAYLNQGDYSKAVGL 206

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY--WARYVETLV 270
           F  VL          +A+     A   L L  EA +  + I    P+    W      L+
Sbjct: 207 FDRVLD---TEPQNIDALYGKARALEHLGLFQEAADCGAGIVALEPENIPAWYHRGSMLL 263

Query: 271 K 271
           +
Sbjct: 264 R 264


>gi|77164418|ref|YP_342943.1| tfp pilus assembly protein PilF [Nitrosococcus oceani ATCC 19707]
 gi|76882732|gb|ABA57413.1| tfp pilus assembly protein PilF [Nitrosococcus oceani ATCC 19707]
          Length = 246

 Score = 38.9 bits (90), Expect = 0.68,   Method: Composition-based stats.
 Identities = 31/253 (12%), Positives = 71/253 (28%), Gaps = 30/253 (11%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           +    A C  +     SS++  + S+   +  +   +  V + K+    +A +   +  +
Sbjct: 1   MLLGFAGCASI----LSSQEQDIPSIDKEKAAKINVQLGVEYFKQGELEQALKKLERAIQ 56

Query: 86  DFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
             P   +     +LL         G+ ++A    +  I                G+    
Sbjct: 57  QDPKLPSAYNALALLKQ-----RLGQAEEAEKYFQRAIKL---DPEYSEAQNNYGVFLYN 108

Query: 144 MIRDVPYDQR-----------ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
                  + R             +L  +      ++       +           +L   
Sbjct: 109 QGHYGDAEARFLEAVKNPLYGTPELAYENAGMAAQKQVEFDKAERYYRKALQLEPRLPKS 168

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYS-DAEHAEEAMARLVEAYVALALMDEAREVVS 251
              +     ++G Y     R Q  L  Y   A H  +++   +     L   D       
Sbjct: 169 LYHMAEISFEKGHYQ----RAQEYLQRYRVGARHTPKSLWLGIRIERELGNEDTVSSYAL 224

Query: 252 LIQERYPQGYWAR 264
           L++  +P    A+
Sbjct: 225 LLRRNFPDSPEAK 237


>gi|15606285|ref|NP_213664.1| hypothetical protein aq_972 [Aquifex aeolicus VF5]
 gi|2983491|gb|AAC07070.1| hypothetical protein aq_972 [Aquifex aeolicus VF5]
          Length = 425

 Score = 38.9 bits (90), Expect = 0.68,   Method: Composition-based stats.
 Identities = 17/115 (14%), Positives = 43/115 (37%), Gaps = 20/115 (17%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV---QYSAGKYQQAAS 115
           ++Y +     KE    +A + F +  + FP         +  ++        GKY++A  
Sbjct: 274 DLYYEGRKLYKEGLKDEALKKFEEAIKLFPNN------QIAMSYASAIYLEHGKYKRALE 327

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             +           + + +YL G++Y ++        +  K  ++ ++   +R  
Sbjct: 328 YAKRVSDL---DPYLLWGWYLQGIAYFKL--------KKYKESIRALNEAKKRIP 371


>gi|330445543|ref|ZP_08309195.1| tol-pal system protein YbgF [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328489734|dbj|GAA03692.1| tol-pal system protein YbgF [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 240

 Score = 38.9 bits (90), Expect = 0.68,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 53/149 (35%), Gaps = 10/149 (6%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
             +       ++ +    +   YEKAV   LK++++  A + F      +P +     + 
Sbjct: 101 AEEKKEPASTEAYSSNVSENAAYEKAVNLILKDKDYKGATKAFQSFLTTYPDSVYKPNAS 160

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
                + ++  +   AA+  +        SK  D     +G+  A+   DV         
Sbjct: 161 YWLGQLFFAQNQLADAATNFKVVADTKDSSKRAD-ALLKLGVI-AERSNDVAT------- 211

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGR 186
              Y   +V+ Y NS   + A+  +   +
Sbjct: 212 AKTYYQEVVKSYPNSTTAQQAKTALAKLK 240



 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 42/130 (32%), Gaps = 23/130 (17%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               Y+ A    + ++T YP+S       Y +G  +    +                  +
Sbjct: 132 KDKDYKGATKAFQSFLTTYPDSVYKPNASYWLGQLFFAQNQLAD--------AATNFKVV 183

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
            +   +S     A   + V   +  + +V   + Y             Q V+ +Y ++  
Sbjct: 184 ADTK-DSSKRADALLKLGVIAER--SNDVATAKTYY------------QEVVKSYPNSTT 228

Query: 226 AEEAMARLVE 235
           A++A   L +
Sbjct: 229 AQQAKTALAK 238



 Score = 35.9 bits (82), Expect = 5.7,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 44/121 (36%), Gaps = 21/121 (17%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYV---TVGRNQLAAKEVEIGRYYLKRGEYVAA 209
           +  K   +     +  Y +S Y   A +++      +NQLA                 AA
Sbjct: 134 KDYKGATKAFQSFLTTYPDSVYKPNASYWLGQLFFAQNQLAD----------------AA 177

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
              F+ V+A+  D+    +A+ +L         +  A+     + + YP    A+  +T 
Sbjct: 178 TN-FK-VVADTKDSSKRADALLKLGVIAERSNDVATAKTYYQEVVKSYPNSTTAQQAKTA 235

Query: 270 V 270
           +
Sbjct: 236 L 236


>gi|13540875|ref|NP_110563.1| TPR repeat-containing protein [Thermoplasma volcanium GSS1]
          Length = 242

 Score = 38.9 bits (90), Expect = 0.68,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 62/203 (30%), Gaps = 44/203 (21%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEE 119
           E+ + +     + KA E F +       + +   + L        YS   Y QA    E 
Sbjct: 27  ERGISYFNIGKYDKAVEEFTK-----AISIINDDADLYHNRGMAYYSMKAYDQAIEDFER 81

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            I+  P S +           Y   +  V  D    +  L+  +  +             
Sbjct: 82  SISLDPNSSD-----------YHNALGSVYEDMGNYEKALEEFNSAIR------------ 118

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA-NYSDAEHAEEAMARLVEAYV 238
                  + L       G  Y K GE   AI  +      +Y+D  +      +  EA  
Sbjct: 119 -----LEDDLPDYYYNRGNVYWKLGEIEKAIQDYSKAADLDYTDQIYV----YKKYEALT 169

Query: 239 ALALMDEA----REVVSLIQERY 257
           +L   DEA     + + ++   Y
Sbjct: 170 SLGRYDEALETVDKAIKVVPANY 192


>gi|256811331|ref|YP_003128700.1| Tetratricopeptide TPR_2 repeat protein [Methanocaldococcus fervens
           AG86]
 gi|256794531|gb|ACV25200.1| Tetratricopeptide TPR_2 repeat protein [Methanocaldococcus fervens
           AG86]
          Length = 575

 Score = 38.9 bits (90), Expect = 0.69,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 35/103 (33%), Gaps = 10/103 (9%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE-YFNQC-SRDFPFAGVARKSLLMSA 101
           + +    ++       +  +A  +L E++  KA E Y              A       +
Sbjct: 5   KKLLNKLISGDSSYYNLISEAERYLNEKDHEKAIECYLQAFKENKGRDVDWA-----NLS 59

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
           +  Y  G Y+ A     + ++  PE+       YL G    ++
Sbjct: 60  YAYYQLGDYKNALEAINKALSFSPENPEF---LYLKGPILYKL 99


>gi|256810018|ref|YP_003127387.1| Tetratricopeptide TPR_2 repeat protein [Methanocaldococcus fervens
           AG86]
 gi|256793218|gb|ACV23887.1| Tetratricopeptide TPR_2 repeat protein [Methanocaldococcus fervens
           AG86]
          Length = 317

 Score = 38.9 bits (90), Expect = 0.69,   Method: Composition-based stats.
 Identities = 40/291 (13%), Positives = 74/291 (25%), Gaps = 90/291 (30%)

Query: 33  CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR------- 85
           C   G   ++   +      D      +Y K ++   + +   A +YF            
Sbjct: 22  CADKGNFDKALEYLEKVQKVDKNNPLVLYIKGIVLKLKGDIEDAVKYFEYLETIEKTSLL 81

Query: 86  --------DFPFAGVA-------RKSLLM---------SAFVQYSAGKYQQAASLGEEYI 121
                    F             + S L           A +    G+Y +A  + +E++
Sbjct: 82  SLGNLICLTFVKGEYEKTLKYIDKLSKLSNSCYLSPFHKALIYMEFGEYDKALEVLDEFL 141

Query: 122 TQYPE-------------------------------SKNVDYVYYLVGMSYAQMIRDVPY 150
             YP                                 +N  YV+YL G    ++      
Sbjct: 142 KIYPNLTSILREKAIILENLGRLDEALECANKILKIRRNDAYVWYLKGRILKKL------ 195

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
                K  L  +   +               +      +A  E+           Y  A+
Sbjct: 196 --GNIKEALDALKIAINL----------NENLIHVYKDIAYLELA-------NNNYEDAL 236

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
                 L  Y +     EA   L   Y  L  +++A ++   I    P+  
Sbjct: 237 SHINKYLEKYPN---DVEAKFYLALIYENLNKIEDALKIYDEIINENPENK 284


>gi|148672474|gb|EDL04421.1| mCG11996, isoform CRA_b [Mus musculus]
          Length = 473

 Score = 38.9 bits (90), Expect = 0.69,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 43/123 (34%), Gaps = 19/123 (15%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA---- 101
           V L     +  + +++  AV    + NF +A + + Q  RD P          M A    
Sbjct: 101 VELSQTQTLTPREQLHVSAVEMFAKGNFPRACDLWEQILRDHPTD--------MLALKFS 152

Query: 102 -FVQYSAGKYQQAASLGEEYITQYPE-SKNVDYVYYLVGMSYAQMIRDVPYD--QRATKL 157
               +  G  +Q           YP  + ++    Y+ G+    ++    YD  Q+  K 
Sbjct: 153 HDAYFYLGYQEQMRDSVAR---VYPFWTPDIPLNSYVKGIYSFGLMETNFYDQAQKLAKE 209

Query: 158 MLQ 160
            L 
Sbjct: 210 ALS 212


>gi|114666434|ref|XP_001173731.1| PREDICTED: cell division cycle protein 27 homolog isoform 4 [Pan
           troglodytes]
          Length = 830

 Score = 38.9 bits (90), Expect = 0.69,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 592 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 641

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178
           N    +Y +GM Y +  +     +   +  L    +          +      S      
Sbjct: 642 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 697

Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                V   +N L               +Y +A+   + +                + + 
Sbjct: 698 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 752

Query: 237 YVALALMDEA 246
           Y  L     A
Sbjct: 753 YKKLGQTHLA 762


>gi|330508351|ref|YP_004384779.1| TPR-repeat-containing protein [Methanosaeta concilii GP-6]
 gi|328929159|gb|AEB68961.1| TPR-repeat protein [Methanosaeta concilii GP-6]
          Length = 440

 Score = 38.9 bits (90), Expect = 0.69,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 39/118 (33%), Gaps = 18/118 (15%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQ 112
           + + + + + V    +  + +A + +++  R  P   A  + K     AF     GK+ +
Sbjct: 22  QTEEDWFYQGVALADQGKYDEAIKAYDEAIRLDPTIAAAWSNKG---VAFA--DQGKHDE 76

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           A    +E I   P        +   G S A        DQ      ++     +    
Sbjct: 77  AIEAYDEAIRLDPTDAA---AWGNKGASLA--------DQGKYDEAIEAYDEAIRLDP 123



 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 35/110 (31%), Gaps = 18/110 (16%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           K      +  + +A E +++  R  P   A    K  +  A      GKY +A    +E 
Sbjct: 166 KGKSLADQGKYDEAIEAYDEAIRLDPANVAAWGNKG-VSLAD----QGKYDEAIEAYDEA 220

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           I   P       V+   G+S A        DQ      ++     +    
Sbjct: 221 IRLDPTDAA---VWGNKGVSLA--------DQGKHDEAIEAYDEAIRLDP 259



 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 35/111 (31%), Gaps = 18/111 (16%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            K V    +  + +A E +++  R  P   A    K  +  A      GK+ +A    +E
Sbjct: 199 NKGVSLADQGKYDEAIEAYDEAIRLDPTDAAVWGNKG-VSLAD----QGKHDEAIEAYDE 253

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
            I   P       V+   G+S          DQ      ++     +    
Sbjct: 254 AIRLDPTDAA---VWGNKGVSLV--------DQGKYDEAIEAYDEAIRLDP 293


>gi|297831424|ref|XP_002883594.1| peptidylprolyl isomerase [Arabidopsis lyrata subsp. lyrata]
 gi|297329434|gb|EFH59853.1| peptidylprolyl isomerase [Arabidopsis lyrata subsp. lyrata]
          Length = 551

 Score = 38.9 bits (90), Expect = 0.69,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 52/151 (34%), Gaps = 26/151 (17%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQ----CSRDFPFA-GVARKSL-------LMSAFVQYSAGK 109
           E+     K   ++ A + + +       D  F+    +++        L  A  +     
Sbjct: 402 EEGNSKFKAGKYALASKRYEKAVKFIEYDTSFSEEEKKQAKALKVACNLNDAACKLKLKD 461

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y+QA  L  + +    ES NV    Y    +Y +M  D+   +   K  L       E  
Sbjct: 462 YKQAEKLCTKVLEL--ESTNVK-ALYRRAQAYMEMA-DLDLAEFDVKKAL-------EID 510

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
            N+  VK  +  +     +   KE    ++Y
Sbjct: 511 PNNREVKLEQRRLKEKMKEFNKKE---AKFY 538


>gi|297531322|ref|YP_003672597.1| hypothetical protein GC56T3_3090 [Geobacillus sp. C56-T3]
 gi|297254574|gb|ADI28020.1| Tetratricopeptide TPR_2 repeat protein [Geobacillus sp. C56-T3]
          Length = 490

 Score = 38.9 bits (90), Expect = 0.69,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 37/100 (37%), Gaps = 15/100 (15%)

Query: 48  LDSVTDVRYQREVY---EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAF 102
           LD       + ++    ++A   L+E+ F++A E        +P  ++          A 
Sbjct: 138 LDGSEWTEEEEQLMVLEDRARRLLEEERFAEAIEALEAIVARYPDVWSAHN-----NLAL 192

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNV-----DYVYYLV 137
             + +G   +A     E + + P + +       + YYL 
Sbjct: 193 AYFYSGDVDKAKQKVREVLKRDPGNLHALCNALVFAYYLR 232


>gi|296201739|ref|XP_002748163.1| PREDICTED: cell division cycle protein 27 homolog isoform 1
           [Callithrix jacchus]
          Length = 824

 Score = 38.9 bits (90), Expect = 0.69,   Method: Composition-based stats.
 Identities = 22/190 (11%), Positives = 47/190 (24%), Gaps = 38/190 (20%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 586 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 635

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178
           N    +Y +GM Y +  +     +   +  L    +          +      S      
Sbjct: 636 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 691

Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                +   +N L               +Y +A+   + +                + + 
Sbjct: 692 LNKAIIIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 746

Query: 237 YVALALMDEA 246
           Y  L     A
Sbjct: 747 YKKLGQTHLA 756


>gi|196234038|ref|ZP_03132873.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
 gi|196221887|gb|EDY16422.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
          Length = 733

 Score = 38.9 bits (90), Expect = 0.69,   Method: Composition-based stats.
 Identities = 11/75 (14%), Positives = 25/75 (33%), Gaps = 11/75 (14%)

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
              +  ++ G+ ++A +     +   P       VYY +G +  +  R    D       
Sbjct: 82  NLGYAYHAQGRTEEAIAEFRRALELNPGD---ALVYYNLGNALGECSR---RD-----EA 130

Query: 159 LQYMSRIVERYTNSP 173
           +    + +    N P
Sbjct: 131 IAAYEQALRYRPNYP 145


>gi|223889263|ref|ZP_03623851.1| hypothetical protein BBU64B_0217 [Borrelia burgdorferi 64b]
 gi|223885296|gb|EEF56398.1| hypothetical protein BBU64B_0217 [Borrelia burgdorferi 64b]
          Length = 1119

 Score = 38.9 bits (90), Expect = 0.69,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 44/220 (20%)

Query: 62   EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLG 117
            +  ++     NF ++ EY N       F   A+K    ++   +  ++   K +++    
Sbjct: 881  KAGIVSNNLGNFKQSEEYLNF------FNANAKKPNEIAIYNLSIAKFENNKLEESLETI 934

Query: 118  EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYV 175
             + I   P  +  +Y  YL      +            +  +   S ++E+     S Y+
Sbjct: 935  NKAIDLNP--EKSEY-LYLKASINLKK--------ENYQNAISLYSLVIEKNPENTSAYI 983

Query: 176  KGARFYVTVGRNQLAAKEVE-------------IGRYYLKRGEYVAAIPRFQLVLANYSD 222
              A+ Y   G    A   +E             +G  Y K   Y  AI  F+  + N   
Sbjct: 984  NLAKAYEKSGNKSQAISTLEKIINKNNKLALNNLGILYKKEKNYQKAIEIFEKAIIN--- 1040

Query: 223  AEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQ 259
                 EA   L    + +     A++++     ++   P+
Sbjct: 1041 --SDIEAKYNLATTLIEINDNTRAKDLLREYTKLKPNNPE 1078



 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 3/62 (4%)

Query: 60   VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            +Y KA + LK++N+  A   ++      P       + +  A     +G   QA S  E+
Sbjct: 948  LYLKASINLKKENYQNAISLYSLVIEKNPEN---TSAYINLAKAYEKSGNKSQAISTLEK 1004

Query: 120  YI 121
             I
Sbjct: 1005 II 1006


>gi|195953408|ref|YP_002121698.1| Tetratricopeptide TPR_2 repeat protein [Hydrogenobaculum sp.
           Y04AAS1]
 gi|195933020|gb|ACG57720.1| Tetratricopeptide TPR_2 repeat protein [Hydrogenobaculum sp.
           Y04AAS1]
          Length = 548

 Score = 38.9 bits (90), Expect = 0.69,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 65/201 (32%), Gaps = 34/201 (16%)

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ-YPESK 128
           ++++  A +   +    FP         L         G+ ++A  +   ++       K
Sbjct: 98  DKDYENAKKTLEEALSKFPQDNFFA---LNLITTYIHDGEIKKAEDIINRFLAFKNENGK 154

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
            +   YY+           +   Q+  +  ++ + + +E   N               + 
Sbjct: 155 EI--FYYIRA--------RIELAQQNKEKAIEDLKKAIELKPN----------FDEAVDT 194

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           LA+        Y +  +Y      ++ +L    D+ +   A+ RL   +  L L  +A +
Sbjct: 195 LAS-------IYDQESKYQDEEKLYEDILKK--DSSNIS-ALERLGNLFFKLGLSYKASD 244

Query: 249 VVSLIQERYPQGYWARYVETL 269
           +   + E        +Y   L
Sbjct: 245 IYKKLAELNKNNLNYQYQYAL 265


>gi|324116599|gb|EGC10516.1| cellulose synthase operon protein C [Escherichia coli E1167]
          Length = 1157

 Score = 38.9 bits (90), Expect = 0.69,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 76/233 (32%), Gaps = 30/233 (12%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQM----IRDVPYDQ 152
             +   + AG+  QA +L      Q P      Y Y  YL G  + +     I  +P  Q
Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDHDRAALAHINSLPRAQ 559

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIGRYY 200
                    +  +V R   S  V      +   G+   A             ++ +  + 
Sbjct: 560 WN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLADWA 613

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 614 QQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 663



 Score = 35.9 bits (82), Expect = 6.1,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + ++ P      Y   L
Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537


>gi|51244493|ref|YP_064377.1| hypothetical protein DP0641 [Desulfotalea psychrophila LSv54]
 gi|50875530|emb|CAG35370.1| hypothetical membrane protein (BatE) [Desulfotalea psychrophila
           LSv54]
          Length = 241

 Score = 38.9 bits (90), Expect = 0.69,   Method: Composition-based stats.
 Identities = 11/69 (15%), Positives = 24/69 (34%), Gaps = 3/69 (4%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++A        F++A   +    +   F+    + L   A      GK  +A    +  +
Sbjct: 24  DEANRHFAAGEFARAISLYENIEKQEGFS---MELLFNQANAYAQLGKTGRAVLYYQRAL 80

Query: 122 TQYPESKNV 130
              P + N+
Sbjct: 81  RLDPGNANI 89


>gi|118579511|ref|YP_900761.1| hypothetical protein Ppro_1078 [Pelobacter propionicus DSM 2379]
 gi|118502221|gb|ABK98703.1| TPR repeat-containing protein [Pelobacter propionicus DSM 2379]
          Length = 423

 Score = 38.9 bits (90), Expect = 0.69,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 76/245 (31%), Gaps = 47/245 (19%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +          + V  L G+   +  D  L              +   +L+ + + +A +
Sbjct: 1   MINILRFFVLMLVVSLLCGFLSGAGGDERL-------------RRGDEYLQARQWEEAID 47

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            +     + P       +L   A    +AGK  +A S  E  +      ++   V Y +G
Sbjct: 48  EYRAALSERP--EW-PAALERLADALMAAGKDGEAISTYERLLRL---DESRGSVRYTLG 101

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN--QLAAKEVE- 195
           + + +  R         K         + +  ++   +     + V R    LA KE   
Sbjct: 102 VLHERGGR--------LKEAESQYRECLRQEPDNDDARRHLADIYVLRGNLTLATKEYRQ 153

Query: 196 -IGR------YYL-------KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
            I R      +Y        K   Y  AI  ++  +     A H  E    L E Y    
Sbjct: 154 LITRQPANPLFYFRLARVLKKNRRYGEAIKEYRRAIEL---APHNAELRRELAELYCKRG 210

Query: 242 LMDEA 246
           + D A
Sbjct: 211 MGDGA 215



 Score = 35.5 bits (81), Expect = 9.0,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 67/203 (33%), Gaps = 48/203 (23%)

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES-- 127
             N + A + + Q     P   +        A V     +Y +A       I   P +  
Sbjct: 141 RGNLTLATKEYRQLITRQPANPL---FYFRLARVLKKNRRYGEAIKEYRRAIELAPHNAE 197

Query: 128 --KNVDYVYYLVGMS------YAQMIRDVPYDQRATKLML--------------QYMSRI 165
             + +  +Y   GM       Y +++R    D    +  L              Q +   
Sbjct: 198 LRRELAELYCKRGMGDGAIGQYRELLRLDNRD-TEARNSLISLYVKLHRYGALRQLLQEG 256

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           VER+ + P    + F + +  +          R      EY AAI  ++  LA  +D   
Sbjct: 257 VERFPDDP---DSHFRMGLMHDF--------AR------EYQAAISEYRKALALKND--- 296

Query: 226 AEEAMARLVEAYVALALMDEARE 248
              A+  L + Y+ L    +A+E
Sbjct: 297 HARALKGLGKIYLKLGKTTKAKE 319


>gi|325279868|ref|YP_004252410.1| Tetratricopeptide TPR_1 repeat-containing protein [Odoribacter
           splanchnicus DSM 20712]
 gi|324311677|gb|ADY32230.1| Tetratricopeptide TPR_1 repeat-containing protein [Odoribacter
           splanchnicus DSM 20712]
          Length = 251

 Score = 38.9 bits (90), Expect = 0.70,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 24/71 (33%), Gaps = 3/71 (4%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++A  F +E  +++A E + +          +           Y  G+  QA    E  +
Sbjct: 27  KQAEEFYREGKYNEAAEIYRKLRA---GGMESAILYYNLGNCYYKLGENTQAILNYERAL 83

Query: 122 TQYPESKNVDY 132
              P   +  Y
Sbjct: 84  LLDPSDASARY 94


>gi|237751469|ref|ZP_04581949.1| periplasmic protein [Helicobacter bilis ATCC 43879]
 gi|229372835|gb|EEO23226.1| periplasmic protein [Helicobacter bilis ATCC 43879]
          Length = 310

 Score = 38.9 bits (90), Expect = 0.71,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 39/98 (39%), Gaps = 3/98 (3%)

Query: 176 KGARFYVTVGRNQ---LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
           + A+ Y     +Q   +A     IG  Y  R EY  A+P ++   +  S A +    +  
Sbjct: 211 EEAKAYFEYLIDQKFAVAESSYYIGEIYYARKEYNEALPYYKTSASLDSKASYMPILLWH 270

Query: 233 LVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
              ++  L   D  R+ +  +   +P+    R  + ++
Sbjct: 271 TAWSFKYLNDSDNYRKFLQTLVALFPESEQGRKAQDIL 308


>gi|153006320|ref|YP_001380645.1| hypothetical protein Anae109_3477 [Anaeromyxobacter sp. Fw109-5]
 gi|152029893|gb|ABS27661.1| conserved hypothetical protein [Anaeromyxobacter sp. Fw109-5]
          Length = 399

 Score = 38.9 bits (90), Expect = 0.71,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 47/133 (35%), Gaps = 15/133 (11%)

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y +A +  +    ++P S  +D   YL G    +    +  D    +     +  +   +
Sbjct: 85  YAEARAKFDALPVRFPTSIRLDNAAYLAGRCSYER-GTIGGDPLEFQDGALRLDAMQVAF 143

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
             SP++  A                  GR   + G+Y AA  +FQ  LA      +A+ A
Sbjct: 144 PTSPFIDNAA--------------YFAGRARFQLGDYEAARLQFQRSLAAAPTGPYADNA 189

Query: 230 MARLVEAYVALAL 242
              L  +   L L
Sbjct: 190 QYFLGRSDFELGL 202



 Score = 38.6 bits (89), Expect = 0.88,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 28/101 (27%), Gaps = 7/101 (6%)

Query: 51  VTDVRYQREVYEKAVLFLKEQ-------NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
            T +R     Y       +          F       +     FP +     +   +   
Sbjct: 100 PTSIRLDNAAYLAGRCSYERGTIGGDPLEFQDGALRLDAMQVAFPTSPFIDNAAYFAGRA 159

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
           ++  G Y+ A    +  +   P     D   Y +G S  ++
Sbjct: 160 RFQLGDYEAARLQFQRSLAAAPTGPYADNAQYFLGRSDFEL 200


>gi|13324588|gb|AAK18797.1|AF305605_1 LMP1 [Borrelia burgdorferi]
          Length = 1065

 Score = 38.9 bits (90), Expect = 0.71,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 44/220 (20%)

Query: 62   EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLG 117
            +  ++     NF ++ EY N       F   A+K    ++   +  ++   K +++    
Sbjct: 827  KAGIVSNNLGNFKQSEEYLNF------FNANAKKPNEIAIYNLSIAKFENNKLEESLETI 880

Query: 118  EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYV 175
             + I   P  +  +Y  YL      +            +  +   S ++E+     S Y+
Sbjct: 881  NKAIDLNP--EKSEY-LYLKASINLKK--------ENYQNAISLYSLVIEKNPENTSAYI 929

Query: 176  KGARFYVTVGRNQLAAKEVE-------------IGRYYLKRGEYVAAIPRFQLVLANYSD 222
              A+ Y   G    A   +E             +G  Y K   Y  AI  F+  + N   
Sbjct: 930  NLAKAYEKSGNKSQAISTLEKIINKNNKLALNNLGILYKKEKNYQKAIEIFEKAIIN--- 986

Query: 223  AEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQ 259
                 EA   L    + +     A++++     ++   P+
Sbjct: 987  --SDIEAKYNLATTLIEINDNTRAKDLLREYTKLKPNNPE 1024



 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 3/62 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y KA + LK++N+  A   ++      P       + +  A     +G   QA S  E+
Sbjct: 894 LYLKASINLKKENYQNAISLYSLVIEKNPEN---TSAYINLAKAYEKSGNKSQAISTLEK 950

Query: 120 YI 121
            I
Sbjct: 951 II 952


>gi|332243159|ref|XP_003270750.1| PREDICTED: cell division cycle protein 27 homolog isoform 2
           [Nomascus leucogenys]
          Length = 830

 Score = 38.9 bits (90), Expect = 0.71,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 592 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 641

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178
           N    +Y +GM Y +  +     +   +  L    +          +      S      
Sbjct: 642 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 697

Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                V   +N L               +Y +A+   + +                + + 
Sbjct: 698 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 752

Query: 237 YVALALMDEA 246
           Y  L     A
Sbjct: 753 YKKLGQTHLA 762


>gi|331670362|ref|ZP_08371201.1| cellulose synthase operon protein C [Escherichia coli TA271]
 gi|331062424|gb|EGI34344.1| cellulose synthase operon protein C [Escherichia coli TA271]
          Length = 1157

 Score = 38.9 bits (90), Expect = 0.71,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 76/233 (32%), Gaps = 30/233 (12%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQM----IRDVPYDQ 152
             +   + AG+  QA +L      Q P      Y Y  YL G  + +     I  +P  Q
Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDHDRAALAHINSLPRAQ 559

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIGRYY 200
                    +  +V R   S  V      +   G+   A             ++ +  + 
Sbjct: 560 WN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLADWA 613

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 614 QQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 663



 Score = 35.9 bits (82), Expect = 6.1,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + ++ P      Y   L
Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537


>gi|302685818|ref|XP_003032589.1| hypothetical protein SCHCODRAFT_75855 [Schizophyllum commune H4-8]
 gi|300106283|gb|EFI97686.1| hypothetical protein SCHCODRAFT_75855 [Schizophyllum commune H4-8]
          Length = 240

 Score = 38.9 bits (90), Expect = 0.71,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 60/173 (34%), Gaps = 26/173 (15%)

Query: 38  WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVAR 94
           W   ++   Y     +    R + E+  L L+E + + A + +    +  R       + 
Sbjct: 52  WATSTTAHSYASDPAEAEAVRCL-EQGTLKLEEGDVNTAKDLYQRSVEIKR-------SP 103

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
            +L       Y   ++ QA +  +E I   P S +         ++ A +I  VP     
Sbjct: 104 SALFNLGVTHYHLKEFDQAIAAWKESIELQPASPDA-----HTNLASAYIISPVPRPD-- 156

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG-RYYLKRGEY 206
             L LQ++          P +        +     A  ++E   +YY +  EY
Sbjct: 157 --LALQHLRTASSLSPEDPEIA-----FNLAAVLEATGDLEGALKYYQRSKEY 202


>gi|90580129|ref|ZP_01235937.1| hypothetical protein VAS14_18126 [Vibrio angustum S14]
 gi|90439014|gb|EAS64197.1| hypothetical protein VAS14_18126 [Vibrio angustum S14]
          Length = 240

 Score = 38.9 bits (90), Expect = 0.71,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 52/146 (35%), Gaps = 10/146 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
                  ++ +    +   YEKAV   LKE+++  A + F      +P +     +    
Sbjct: 104 KKEATSSEAFSSNTDENAAYEKAVNLILKEKDYKGATKAFQSFLTTYPNSVYKPNASYWL 163

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
             + ++  +   AA+  +        SK  D     +G+     I +   D    K    
Sbjct: 164 GQLFFAQNQLADAATNFKVVADTKDSSKRAD-ALLKLGV-----IAERGNDIATAKK--- 214

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGR 186
           Y   +++ Y NS     A+  +T  +
Sbjct: 215 YYQEVIKAYPNSTSANQAKTALTKLK 240



 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 38/130 (29%), Gaps = 23/130 (17%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               Y+ A    + ++T YP S       Y +G  +    +                  +
Sbjct: 132 KEKDYKGATKAFQSFLTTYPNSVYKPNASYWLGQLFFAQNQLAD--------AATNFKVV 183

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
            +   +S     A   + V   +    ++   + Y             Q V+  Y ++  
Sbjct: 184 ADTK-DSSKRADALLKLGVIAER--GNDIATAKKYY------------QEVIKAYPNSTS 228

Query: 226 AEEAMARLVE 235
           A +A   L +
Sbjct: 229 ANQAKTALTK 238


>gi|78188464|ref|YP_378802.1| TPR repeat-containing protein [Chlorobium chlorochromatii CaD3]
 gi|78170663|gb|ABB27759.1| TPR repeat [Chlorobium chlorochromatii CaD3]
          Length = 965

 Score = 38.9 bits (90), Expect = 0.71,   Method: Composition-based stats.
 Identities = 25/205 (12%), Positives = 62/205 (30%), Gaps = 46/205 (22%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YE++        + +A          + +        L+     Y   +Y+++ +   + 
Sbjct: 722 YEESEAA-----YRQAI----ALDEKYAY-PWFNLGQLL----HYKLERYEESEAAYRQA 767

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           I      +N  Y +  +G    + +      + A +  +    + V       Y      
Sbjct: 768 IAI---DENNAYPWNNLGQLLHEWLGRYEEAETAYRQAIALDEKYV-------YPVTNLA 817

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
            +   RN+ A         Y +           + VL +  D +         ++A++ L
Sbjct: 818 RLLAQRNRKAE-----AETYYR-----------EAVLKDTQDTQQ------LFLQAHLFL 855

Query: 241 ALMDEAREVVSLIQERYPQGYWARY 265
                A + +  + E+   G    +
Sbjct: 856 GNRQLAMDALQALAEKAQNGNQYAF 880


>gi|67078436|ref|NP_001019964.1| cell division cycle protein 27 homolog [Rattus norvegicus]
 gi|81908662|sp|Q4V8A2|CDC27_RAT RecName: Full=Cell division cycle protein 27 homolog
 gi|66910648|gb|AAH97475.1| Cell division cycle 27 homolog (S. cerevisiae) [Rattus norvegicus]
          Length = 824

 Score = 38.9 bits (90), Expect = 0.71,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 586 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 635

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178
           N    +Y +GM Y +  +     +   +  L    +          +      S      
Sbjct: 636 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 691

Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                V   +N L               +Y +A+   + +                + + 
Sbjct: 692 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 746

Query: 237 YVALALMDEA 246
           Y  L     A
Sbjct: 747 YKKLGQTHLA 756


>gi|312213071|emb|CBX93153.1| hypothetical protein [Leptosphaeria maculans]
          Length = 890

 Score = 38.9 bits (90), Expect = 0.72,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 47/140 (33%), Gaps = 22/140 (15%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSA 107
            +D    +  Y     ++ +Q + KAYE + Q        P              + Y  
Sbjct: 294 ASDQTDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQI 347

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +Y+ A       I   P   N+  V+Y +G +  +   +   D       L    R  +
Sbjct: 348 NQYRDALDAYSRAIRLNP---NISEVWYDLG-TLYESCNNQTAD------ALDAYQRAAD 397

Query: 168 RYTNSPYVKGARFYVTVGRN 187
              ++ ++   +  + + +N
Sbjct: 398 LDPSNVHI---KARLQLLQN 414


>gi|237803113|ref|YP_002888307.1| tetratricopeptide repeat protein [Chlamydia trachomatis
           B/Jali20/OT]
 gi|231274347|emb|CAX11142.1| tetratricopeptide repeat protein [Chlamydia trachomatis
           B/Jali20/OT]
          Length = 335

 Score = 38.9 bits (90), Expect = 0.72,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 52/148 (35%), Gaps = 17/148 (11%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D    + +Y KAV+    ++   A +      +  P      K+ +   ++      + +
Sbjct: 141 DPWNPQGLYNKAVVLSDMEDEEGAIDLLESTVKRNPL-YW--KAWVKLGYLLSRNKIWDR 197

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A    E  +   P   ++   +Y +G+ Y  + +        T+L L+     +    N+
Sbjct: 198 ATEAYERVVQLRP---DLSDGHYNLGLCYLTLDK--------TRLALKAFQESLLL--NA 244

Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYY 200
                A FY+ +    L   E     +Y
Sbjct: 245 EDA-DAHFYIGLAHMDLKQNEQAYDAFY 271


>gi|21674651|ref|NP_662716.1| TPR domain-containing protein [Chlorobium tepidum TLS]
 gi|21647855|gb|AAM73058.1| TPR domain protein [Chlorobium tepidum TLS]
          Length = 165

 Score = 38.9 bits (90), Expect = 0.72,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 56/157 (35%), Gaps = 31/157 (19%)

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
           L          ++  A       I   P    +D  Y  +G +Y         D++    
Sbjct: 16  LNLGKEYARQQRFDDAIQAYRRAIKLEPG---LDEAYSALGAAYF--------DKKEFNA 64

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
            L +M + V+   +               + L  ++ ++G  Y +   Y  A+  +Q  +
Sbjct: 65  ALPWMQKRVDIAPD---------------DSL--RQFDLGNVYFQLNRYNDAVASYQKAI 107

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
            N   +   +EA   +   Y+ +  +DEAR++   +Q
Sbjct: 108 DN---SYSFQEAWYSMAVCYIKMGKIDEARKIHKWLQ 141


>gi|113478135|ref|YP_724196.1| sulfotransferase [Trichodesmium erythraeum IMS101]
 gi|110169183|gb|ABG53723.1| sulfotransferase [Trichodesmium erythraeum IMS101]
          Length = 887

 Score = 38.9 bits (90), Expect = 0.72,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 50/153 (32%), Gaps = 31/153 (20%)

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
            +A    ++ I   P +    + YY +G +  ++ R         +  +    R ++   
Sbjct: 366 DEAIYSYQKAIEINPNNY---WFYYSLGKALCKLSR--------YEEAITAYQRGIKIDP 414

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
           N  Y               A   + +    LKR  +  AI  ++  +    D+  +    
Sbjct: 415 N-LY--------------FAYHNLGVALVELKR--WNQAIVAYRQAIKIKPDSYWSH--- 454

Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
             L E ++ L   D+A E      E  P   W 
Sbjct: 455 YNLGEIFLKLQEWDKAVETYRYAIENNPNSPWY 487



 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 23/174 (13%), Positives = 57/174 (32%), Gaps = 32/174 (18%)

Query: 60  VYEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           VYEK    LKE+    +A   + +     P                    +Y++A +  +
Sbjct: 351 VYEKLGDALKEKGLIDEAIYSYQKAIEINPNNYW---FYYSLGKALCKLSRYEEAITAYQ 407

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
             I       N+ + Y+ +G++  ++ R            +    + ++   +S +    
Sbjct: 408 RGIKI---DPNLYFAYHNLGVALVELKR--------WNQAIVAYRQAIKIKPDSYWS--- 453

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
                            +G  +LK  E+  A+  ++  + N  ++    + +  
Sbjct: 454 --------------HYNLGEIFLKLQEWDKAVETYRYAIENNPNSPWYYQYLGI 493


>gi|254511952|ref|ZP_05124019.1| putative transmembrane adenylate cyclase [Rhodobacteraceae
           bacterium KLH11]
 gi|221535663|gb|EEE38651.1| putative transmembrane adenylate cyclase [Rhodobacteraceae
           bacterium KLH11]
          Length = 445

 Score = 38.9 bits (90), Expect = 0.72,   Method: Composition-based stats.
 Identities = 11/66 (16%), Positives = 24/66 (36%), Gaps = 4/66 (6%)

Query: 64  AVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
                   +++ A   F +  S   PF  ++  + LM+    +  G+  +A  L   +  
Sbjct: 339 GAAQFHTGDYAAAIRTFEETISSGGPFGPISA-AYLMA--AHWQNGEQDEAQRLARVFSD 395

Query: 123 QYPESK 128
            +P   
Sbjct: 396 TWPSFP 401


>gi|119953007|ref|YP_945216.1| surface-located membrane protein 1 [Borrelia turicatae 91E135]
 gi|119861778|gb|AAX17546.1| surface-located membrane protein 1 [Borrelia turicatae 91E135]
          Length = 785

 Score = 38.9 bits (90), Expect = 0.72,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 35/103 (33%), Gaps = 19/103 (18%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
            + N+ KA E F +          + ++    A    +    ++A    +EYI   P + 
Sbjct: 689 NQGNYQKAIEIFQKAEA-----HSSLEAKYNLATALIAIKDNKRAMEKLKEYIKINPNNP 743

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
                 + +G+       D   D        + +  ++ ++ N
Sbjct: 744 E---ALHALGIIEYN---DNGND--------KILKEVINKFPN 772


>gi|116250899|ref|YP_766737.1| adenylate cyclase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115255547|emb|CAK06624.1| putative adenylate cyclase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 634

 Score = 38.9 bits (90), Expect = 0.72,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 32/76 (42%), Gaps = 9/76 (11%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           +A+   +   + +A E   Q     P   V+ ++LL + +     G++++A +  +E + 
Sbjct: 542 QALALFQLGRYEEAVELLLQRVSRNPVTDVS-RALLAACYGH--LGRFEEARATWQEVMR 598

Query: 123 QYPESKNVDYVY-YLV 137
             P     DY   Y  
Sbjct: 599 VNP-----DYSLEYRR 609


>gi|323497736|ref|ZP_08102751.1| hypothetical protein VISI1226_04300 [Vibrio sinaloensis DSM 21326]
 gi|323317212|gb|EGA70208.1| hypothetical protein VISI1226_04300 [Vibrio sinaloensis DSM 21326]
          Length = 386

 Score = 38.9 bits (90), Expect = 0.73,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 7/74 (9%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S ++   + +  ++A L+ K + + KA E + Q +R         +  L  A + Y  G+
Sbjct: 261 SQSESLTEEQWIQQAYLWQKAKEWDKAIEVWQQLARTD------EQYYLNIAQIHYRQGE 314

Query: 110 YQQAASLGEEYITQ 123
           YQ A +  E  I  
Sbjct: 315 YQPALAALER-IKL 327


>gi|317026444|ref|XP_001389609.2| TPR domain protein [Aspergillus niger CBS 513.88]
          Length = 730

 Score = 38.9 bits (90), Expect = 0.73,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 3/65 (4%)

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           YLK  ++ AA+   + VL   SD E +E+A+ R  +A   LA  +E+ +V  ++   +P 
Sbjct: 247 YLKTHQFDAALYDLKTVL---SDQESSEKALFRKSQALYHLARFEESCKVHQVLFATFPN 303

Query: 260 GYWAR 264
              A+
Sbjct: 304 NTAAK 308


>gi|313226137|emb|CBY21280.1| unnamed protein product [Oikopleura dioica]
          Length = 477

 Score = 38.9 bits (90), Expect = 0.73,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 38/138 (27%), Gaps = 25/138 (18%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQ 112
               E+  +A    K +++ +A E +++       +    + +S     F       +  
Sbjct: 3   PAAEELKNQANDVFKTKDYERALELYSKAIEVDGTSAVLYSNRS-----FAYLKTESFGA 57

Query: 113 AASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           A     + I   P+     Y   YY    +   M              L+    + +   
Sbjct: 58  ALEDAGKAIELDPK-----YTKGYYRRASANMAM--------GQFSKALKDYESVFKVKP 104

Query: 171 NSPYVKGARFYVTVGRNQ 188
             P     R  V   R  
Sbjct: 105 KDP---DVRKKVQECRKI 119


>gi|261198507|ref|XP_002625655.1| serine/threonine-protein phosphatase 5 [Ajellomyces dermatitidis
           SLH14081]
 gi|239594807|gb|EEQ77388.1| serine/threonine-protein phosphatase 5 [Ajellomyces dermatitidis
           SLH14081]
 gi|239610072|gb|EEQ87059.1| serine/threonine-protein phosphatase 5 [Ajellomyces dermatitidis
           ER-3]
 gi|327350995|gb|EGE79852.1| serine/threonine protein phosphatase [Ajellomyces dermatitidis ATCC
           18188]
          Length = 478

 Score = 38.9 bits (90), Expect = 0.73,   Method: Composition-based stats.
 Identities = 18/158 (11%), Positives = 48/158 (30%), Gaps = 31/158 (19%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF---PFAGVARKSLLMSAFVQYS 106
           + TD      +  +        ++ +A ++++Q    +   P +    ++ +        
Sbjct: 2   ATTDKEAATALKLQGNKAFASHDWIQALDFYSQAIEQYDQDP-SFFCNRAQV-----HIK 55

Query: 107 AGKYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
              Y  A +   + I   P      Y   Y+   ++   ++          +  L+    
Sbjct: 56  REAYGYAVADATKAIELDPN-----YVKAYWRRAIANTAILNS--------RAALKDFKT 102

Query: 165 IVERYTNSPYVKGARFYVTVG----RNQLAAKEVEIGR 198
           +V +  N      A+  +       R     K +E+  
Sbjct: 103 VVRKAPNDR---DAKLKLAECEKLVRRIEFEKAIEVAD 137


>gi|149054498|gb|EDM06315.1| cell division cycle 27 homolog (S. cerevisiae), isoform CRA_a
           [Rattus norvegicus]
          Length = 825

 Score = 38.9 bits (90), Expect = 0.73,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 587 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 636

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178
           N    +Y +GM Y +  +     +   +  L    +          +      S      
Sbjct: 637 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 692

Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                V   +N L               +Y +A+   + +                + + 
Sbjct: 693 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 747

Query: 237 YVALALMDEA 246
           Y  L     A
Sbjct: 748 YKKLGQTHLA 757


>gi|15892235|ref|NP_359949.1| hypothetical protein RC0312 [Rickettsia conorii str. Malish 7]
 gi|15619372|gb|AAL02850.1| unknown [Rickettsia conorii str. Malish 7]
          Length = 245

 Score = 38.9 bits (90), Expect = 0.73,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 25/86 (29%), Gaps = 8/86 (9%)

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
             A   Y   K  +A    + +I  YP S  +   Y+  G  + +  +D           
Sbjct: 122 DLALAAYKDNKLTEAKDKFKHFIQNYPNSLLISNAYFWYGECFFKQ-KDYNR------AA 174

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTV 184
           + Y+    E              + +
Sbjct: 175 VNYLKGYKEL-PKGAKSSDGLLKLAL 199



 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 15/133 (11%), Positives = 47/133 (35%), Gaps = 12/133 (9%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D+   ++ Y+ A+   K+   ++A + F    +++P + +   +        +    Y +
Sbjct: 113 DIAPDKQAYDLALAAYKDNKLTEAKDKFKHFIQNYPNSLLISNAYFWYGECFFKQKDYNR 172

Query: 113 AASLG-EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           AA    + Y    P+          + +S  ++        + T+     +++  + +  
Sbjct: 173 AAVNYLKGYKEL-PKGAKSSDGLLKLALSLGEL--------KKTQEACNMLAKFDKEFPT 223

Query: 172 SPYVKGARFYVTV 184
           +     A   +  
Sbjct: 224 NR--TAASKKMAE 234


>gi|305665947|ref|YP_003862234.1| TRP domain-containing protein BatE [Maribacter sp. HTCC2170]
 gi|88710722|gb|EAR02954.1| BatE, TRP domain containing protein [Maribacter sp. HTCC2170]
          Length = 252

 Score = 38.9 bits (90), Expect = 0.73,   Method: Composition-based stats.
 Identities = 10/95 (10%), Positives = 30/95 (31%), Gaps = 7/95 (7%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
           V+L S   +     ++ KA       ++  + + +++   +      + +         Y
Sbjct: 9   VFLFSFLGIAQNDVIFNKATEAYNNGDYQTSIDSYSKILEN---GQHSAELYFNLGNAYY 65

Query: 106 SAGKYQQAASLGEEYITQYPES----KNVDYVYYL 136
              +   +    E+ +   P       N+ Y   +
Sbjct: 66  KLNQIAPSIYNYEKALLLSPNDNEIKNNLSYAQNM 100


>gi|146277600|ref|YP_001167759.1| TPR repeat-containing protein [Rhodobacter sphaeroides ATCC 17025]
 gi|145555841|gb|ABP70454.1| Tetratricopeptide TPR_2 repeat protein [Rhodobacter sphaeroides
           ATCC 17025]
          Length = 190

 Score = 38.9 bits (90), Expect = 0.73,   Method: Composition-based stats.
 Identities = 16/146 (10%), Positives = 42/146 (28%), Gaps = 23/146 (15%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGK 109
           +       + ++    +     + A E+        P FA     ++        + AG 
Sbjct: 65  SGSPSADLLLQRGREAMAAGKSTVAIEHLTALVDHAPDFAEGWNARAT-----AYFRAGM 119

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +  + +     +T  P          L G+ +  + +          +  L         
Sbjct: 120 FGPSMADIGRVLTLNPRHFGA-----LAGLGTMLEQMERPERALEVYRAALAI------- 167

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEV 194
           + +   V+ A   +     + A +E+
Sbjct: 168 HPHLEGVEQAVKRLEA---KAAGQEL 190


>gi|332243157|ref|XP_003270749.1| PREDICTED: cell division cycle protein 27 homolog isoform 1
           [Nomascus leucogenys]
          Length = 824

 Score = 38.9 bits (90), Expect = 0.74,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 586 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 635

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178
           N    +Y +GM Y +  +     +   +  L    +          +      S      
Sbjct: 636 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 691

Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                V   +N L               +Y +A+   + +                + + 
Sbjct: 692 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 746

Query: 237 YVALALMDEA 246
           Y  L     A
Sbjct: 747 YKKLGQTHLA 756


>gi|297716052|ref|XP_002834361.1| PREDICTED: cell division cycle protein 27 homolog isoform 2 [Pongo
           abelii]
          Length = 830

 Score = 38.9 bits (90), Expect = 0.74,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 592 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 641

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178
           N    +Y +GM Y +  +     +   +  L    +          +      S      
Sbjct: 642 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 697

Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                V   +N L               +Y +A+   + +                + + 
Sbjct: 698 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 752

Query: 237 YVALALMDEA 246
           Y  L     A
Sbjct: 753 YKKLGQTHLA 762


>gi|157427980|ref|NP_001098898.1| cell division cycle protein 27 homolog [Bos taurus]
 gi|281312186|sp|A7Z061|CDC27_BOVIN RecName: Full=Cell division cycle protein 27 homolog
 gi|157279359|gb|AAI53260.1| CDC27 protein [Bos taurus]
 gi|296476257|gb|DAA18372.1| cell division cycle protein 27 [Bos taurus]
          Length = 825

 Score = 38.9 bits (90), Expect = 0.74,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 587 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 636

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178
           N    +Y +GM Y +  +     +   +  L    +          +      S      
Sbjct: 637 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 692

Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                V   +N L               +Y +A+   + +                + + 
Sbjct: 693 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 747

Query: 237 YVALALMDEA 246
           Y  L     A
Sbjct: 748 YKKLGQTHLA 757


>gi|73965112|ref|XP_548047.2| PREDICTED: similar to Cell division cycle protein 27 homolog
           (CDC27Hs) (H-NUC) isoform 1 [Canis familiaris]
 gi|301784248|ref|XP_002927536.1| PREDICTED: cell division cycle protein 27 homolog [Ailuropoda
           melanoleuca]
          Length = 825

 Score = 38.9 bits (90), Expect = 0.74,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 587 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 636

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178
           N    +Y +GM Y +  +     +   +  L    +          +      S      
Sbjct: 637 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 692

Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                V   +N L               +Y +A+   + +                + + 
Sbjct: 693 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 747

Query: 237 YVALALMDEA 246
           Y  L     A
Sbjct: 748 YKKLGQTHLA 757


>gi|327263211|ref|XP_003216414.1| PREDICTED: tetratricopeptide repeat protein 37-like isoform 2
           [Anolis carolinensis]
          Length = 1570

 Score = 38.9 bits (90), Expect = 0.74,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 57/150 (38%), Gaps = 7/150 (4%)

Query: 11  IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE-VYEKAVLFLK 69
           ++EA + Q +K     F ++A+  L G +        LD V D     + +  K   +L 
Sbjct: 339 LYEASSLQQHKERACCFKAVALLRLPGSDAADEAINSLDQVLDKNNNPKCIALKGQAYLN 398

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
           +    +A +   +     P   +A  +  +   +QY    Y QA +  +  I    +   
Sbjct: 399 KGLTGEASKIAQELKVTHP--DLAE-ADYLEGLIQYKEKNYSQAETSFQRAIE---KETE 452

Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
           +   ++ +G++Y  M  +   D+       
Sbjct: 453 MADFHFCLGLTYWFMSEETRKDKSKALTQF 482


>gi|257458911|ref|ZP_05624032.1| LemA protein [Campylobacter gracilis RM3268]
 gi|257443708|gb|EEV18830.1| LemA protein [Campylobacter gracilis RM3268]
          Length = 237

 Score = 38.9 bits (90), Expect = 0.74,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 7/71 (9%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           Q      L  +  +VERY +      A       +NQL   E  I    + R +Y+A++ 
Sbjct: 143 QGELSSALSRLMLVVERYPD----LKANQNFADLQNQLEGTENRIA---VARKDYIASVQ 195

Query: 212 RFQLVLANYSD 222
            +  ++  +  
Sbjct: 196 EYNKLIRTFPT 206


>gi|224046301|ref|XP_002197252.1| PREDICTED: similar to aspartyl(asparaginyl)beta-hydroxylase; HAAH
           [Taeniopygia guttata]
          Length = 704

 Score = 38.9 bits (90), Expect = 0.74,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 45/125 (36%), Gaps = 18/125 (14%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR----KSLLMSAFVQYSAG 108
           D   + E+ + A    K+    +A   F      +P +  AR    +S    A  +  + 
Sbjct: 324 DKTIKAEL-DAAEKLRKKGKVEEALRAFEALVNQYPQSPRARYGKAQSEDDLAE-KMRSN 381

Query: 109 K-YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ--RATKLMLQYMSRI 165
           +  QQA +  +E ++      NV        +    + R+    Q     +  L  + ++
Sbjct: 382 EMLQQAINTYDEVVSL----PNVP-----SDLIKLSLKREADRQQFLGRMRGSLVTLQKL 432

Query: 166 VERYT 170
           V+ + 
Sbjct: 433 VQLFP 437


>gi|224532341|ref|ZP_03672973.1| TPR domain protein [Borrelia valaisiana VS116]
 gi|224511806|gb|EEF82212.1| TPR domain protein [Borrelia valaisiana VS116]
          Length = 379

 Score = 38.9 bits (90), Expect = 0.74,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 68/212 (32%), Gaps = 36/212 (16%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           K+ N+ KA  Y+ +C    P       +L        +   Y++A  + EEY+   PE+ 
Sbjct: 70  KKNNYDKAIVYYQKCLVKHPNNNY---ALFGLGDCYRNLDDYKKATDIWEEYLKYDPEN- 125

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV--------KGARF 180
                     ++    +       +  +   Q   +++E    + Y            + 
Sbjct: 126 ----------ITVLTRVASSYRKLKNFQKSKQTYLKVMELMPENDYALVGIGHLYYDFKE 175

Query: 181 YVTVGRNQLAAKEVE-----------IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
           Y    +  L   E+            IG  Y K  E+   I  F+  L     +     A
Sbjct: 176 YKEALKYWLKMYELNQSKVDVRVLTSIGNCYRKLKEFTRGIYFFKKALEI---SPSNFYA 232

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +  L + Y       EA +    I E+ P+  
Sbjct: 233 IFGLADCYRGNKEYKEALKYWFDIIEKDPKNN 264


>gi|149723400|ref|XP_001501593.1| PREDICTED: cell division cycle 27 homolog (S. cerevisiae) isoform 1
           [Equus caballus]
          Length = 825

 Score = 38.9 bits (90), Expect = 0.74,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 587 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 636

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178
           N    +Y +GM Y +  +     +   +  L    +          +      S      
Sbjct: 637 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 692

Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                V   +N L               +Y +A+   + +                + + 
Sbjct: 693 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 747

Query: 237 YVALALMDEA 246
           Y  L     A
Sbjct: 748 YKKLGQTHLA 757


>gi|167466177|ref|NP_001107563.1| cell division cycle protein 27 homolog isoform 1 [Homo sapiens]
 gi|119578091|gb|EAW57687.1| cell division cycle 27, isoform CRA_b [Homo sapiens]
          Length = 830

 Score = 38.9 bits (90), Expect = 0.74,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 592 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 641

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178
           N    +Y +GM Y +  +     +   +  L    +          +      S      
Sbjct: 642 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 697

Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                V   +N L               +Y +A+   + +                + + 
Sbjct: 698 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 752

Query: 237 YVALALMDEA 246
           Y  L     A
Sbjct: 753 YKKLGQTHLA 762


>gi|15079681|gb|AAH11656.1| CDC27 protein [Homo sapiens]
 gi|123985059|gb|ABM83706.1| cell division cycle 27 [synthetic construct]
 gi|123998795|gb|ABM87026.1| cell division cycle 27 [synthetic construct]
          Length = 830

 Score = 38.9 bits (90), Expect = 0.74,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 592 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 641

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178
           N    +Y +GM Y +  +     +   +  L    +          +      S      
Sbjct: 642 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 697

Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                V   +N L               +Y +A+   + +                + + 
Sbjct: 698 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 752

Query: 237 YVALALMDEA 246
           Y  L     A
Sbjct: 753 YKKLGQTHLA 762


>gi|312968146|ref|ZP_07782356.1| cellulose synthase operon protein C [Escherichia coli 2362-75]
 gi|312286971|gb|EFR14881.1| cellulose synthase operon protein C [Escherichia coli 2362-75]
          Length = 1026

 Score = 38.9 bits (90), Expect = 0.75,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 79/235 (33%), Gaps = 34/235 (14%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 312 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 368

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 369 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 425

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK-----------EVEIGR 198
             Q         +  +V R  N   ++ A      G+   A             ++ +  
Sbjct: 426 RAQWN-----SNIQELVNRLQNDQVLETANRLRENGKEAEAEAMLRQQPPSSRIDLTLAD 480

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +  +R +Y AA   +Q VLA         +A+  L E  +A      AR  ++ +
Sbjct: 481 WAQQRRDYTAARAAYQNVLAREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 532


>gi|307824180|ref|ZP_07654407.1| Sel1 domain protein repeat-containing protein [Methylobacter
           tundripaludum SV96]
 gi|307734964|gb|EFO05814.1| Sel1 domain protein repeat-containing protein [Methylobacter
           tundripaludum SV96]
          Length = 779

 Score = 38.9 bits (90), Expect = 0.75,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 47/125 (37%), Gaps = 17/125 (13%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQ--NFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           R+       D   + E+   A L +++    + +A  +  + +   P      +S ++ A
Sbjct: 486 REAVERKSNDAPSRVEL---ARLLIRQGEAKYPEAERWLREVADRHPDN---EQSRVVLA 539

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
            + +   K  +A +L  E++  YP++            +    I+D   D  A   +   
Sbjct: 540 KLLFKQNKTPEAENLLTEFLKDYPKNS---------AKNILTQIKDNTLDVSAWLDVEAD 590

Query: 162 MSRIV 166
            S I+
Sbjct: 591 DSEII 595


>gi|163754734|ref|ZP_02161856.1| Tetratricopeptide repeat family protein [Kordia algicida OT-1]
 gi|161325675|gb|EDP97002.1| Tetratricopeptide repeat family protein [Kordia algicida OT-1]
          Length = 323

 Score = 38.9 bits (90), Expect = 0.75,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 59/182 (32%), Gaps = 48/182 (26%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQ------------------------------- 71
           S + + +SV+D     + Y + V + ++                                
Sbjct: 133 SDEKHENSVSDKEKALKFYNEGVTYYRKGEYENAVVAYKKAVKKDKKFAFAWDNLGLSYR 192

Query: 72  ---NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
              N+ +A + + +  +  P   V    L+     Q   GKY+ A    +++I  YPE  
Sbjct: 193 RLENYRQAIKAYRKSLKLDPKGRVP---LMNLPIAQSYLGKYKDAIKSYQKFIEIYPEDP 249

Query: 129 NVDYVYYLVGMS-YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
                YY  G+S      ++                 +     NSPY K A+  + +  +
Sbjct: 250 EG---YY--GISRMYMETKEYEKSLDNVMKSFVMYKTV-----NSPYHKDAQSIIVMLYD 299

Query: 188 QL 189
            +
Sbjct: 300 IM 301


>gi|126665165|ref|ZP_01736148.1| TPR repeat protein [Marinobacter sp. ELB17]
 gi|126630535|gb|EBA01150.1| TPR repeat protein [Marinobacter sp. ELB17]
          Length = 621

 Score = 38.9 bits (90), Expect = 0.75,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 64/208 (30%), Gaps = 37/208 (17%)

Query: 76  AYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
           A           P F      ++++   + Y + + + A         ++P ++ +    
Sbjct: 240 ALARLQTLLGKHPTFQP----AIILKGDLLYGSDQKRAALDHLMTNTRRFPGNRKMG-AL 294

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN-SPYVKG-ARFYVTVGRNQLAAK 192
           Y   +            +   +       R+V RY + S +    A   +   +  +A K
Sbjct: 295 YGRMLVN----------EGELQAAQDEFERLVTRYPDMSEFRLSHALVAIENQQGDIARK 344

Query: 193 EVEI----------GRYYLKR-----GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           E+              YYL R        V AI  +Q V            A + L E  
Sbjct: 345 ELSFLLNRGQQAAEANYYLGRLADNENHTVQAINYYQAVGEGVYYLPAQARASSLLAET- 403

Query: 238 VALALMDEAREVVSLIQERYPQGYWARY 265
                +++A   +  +++  P    A +
Sbjct: 404 ---GELEQAVNAIQRLRQTNPGRSEALW 428


>gi|119578092|gb|EAW57688.1| cell division cycle 27, isoform CRA_c [Homo sapiens]
          Length = 823

 Score = 38.9 bits (90), Expect = 0.75,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 585 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 634

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178
           N    +Y +GM Y +  +     +   +  L    +          +      S      
Sbjct: 635 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 690

Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                V   +N L               +Y +A+   + +                + + 
Sbjct: 691 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 745

Query: 237 YVALALMDEA 246
           Y  L     A
Sbjct: 746 YKKLGQTHLA 755


>gi|120601940|ref|YP_966340.1| N-acetylmuramoyl-L-alanine amidase [Desulfovibrio vulgaris DP4]
 gi|120562169|gb|ABM27913.1| N-acetylmuramoyl-L-alanine amidase [Desulfovibrio vulgaris DP4]
          Length = 568

 Score = 38.9 bits (90), Expect = 0.75,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 38/97 (39%), Gaps = 8/97 (8%)

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
              A + V + R  LA + +    +        AA+ R++ V   Y  +  A++A+    
Sbjct: 80  APAALYRVALTREGLARRSMNPADF-------KAAVERYEEVARRYPRSALADDALFAAA 132

Query: 235 E-AYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
           +     L     AR+++      +P+G  A     ++
Sbjct: 133 KLCMERLDDASAARKILERQLREFPKGDMADAARAML 169


>gi|66516821|ref|XP_396989.2| PREDICTED: WD and tetratricopeptide repeats protein 1-like [Apis
           mellifera]
          Length = 658

 Score = 38.9 bits (90), Expect = 0.75,   Method: Composition-based stats.
 Identities = 12/158 (7%), Positives = 41/158 (25%), Gaps = 28/158 (17%)

Query: 37  GWERQSSRDVYLDSVTDVRYQ--REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--V 92
                +    + +    +      E+  +A    ++Q ++ A   +N+     P A    
Sbjct: 333 CCIENNEDIDFTNKNIKILPPHVEELKRQANESFEQQKYTLAINLYNKAISYCPTAAVLF 392

Query: 93  ARKSLLMSAFVQYS---AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           A ++              G    A    +  +   P        ++ +      + +   
Sbjct: 393 ANRAA-----AYMKRTWDGDIYAALKDCQMTLLLDPGHVK---AHFRLARCLFDLHQSA- 443

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGA---RFYVTV 184
                     + +    +++    Y   +      + +
Sbjct: 444 -------EADKIIKDFQQKFP--EYASNSACKALKMDI 472


>gi|116625490|ref|YP_827646.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116228652|gb|ABJ87361.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 701

 Score = 38.9 bits (90), Expect = 0.75,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 56/179 (31%), Gaps = 34/179 (18%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLM--SAFVQYSAGKYQQAASLGEEYITQYPESK 128
           +++    +   +    +P      +  +    A    + G    A    + Y        
Sbjct: 525 KDWDSVIKKGTEIRDMYP--DYVEEHSVYEILATAYLAKGNKAAAVEELQRYEK------ 576

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
                   +G            D  + KL+ + +  +      +     A   +      
Sbjct: 577 --------IG----------GRDPESLKLLSKNLEEMGR----TAEAADALNRLNFIYPM 614

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
            AA    +GR  L +G   AAI  F+ VLA     +   +A   L +AY A    ++A+
Sbjct: 615 DAAAHRSLGRLSLVQGNNPAAIREFKAVLAKNPLDQA--QAHYDLAKAYQANKQTEQAK 671


>gi|313676466|ref|YP_004054462.1| hypothetical protein Ftrac_2376 [Marivirga tractuosa DSM 4126]
 gi|312943164|gb|ADR22354.1| hypothetical protein Ftrac_2376 [Marivirga tractuosa DSM 4126]
          Length = 627

 Score = 38.9 bits (90), Expect = 0.75,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 22/62 (35%), Gaps = 3/62 (4%)

Query: 133 VYYLVGMSYAQMIRDVPYDQ---RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
           V Y  G+S  ++I     DQ          QY+    E + N  Y   +       ++ L
Sbjct: 258 VQYNKGLSSYEIINPKNPDQHIYTNGVEASQYLKIYKENFPNLEYETDSVQLFITVKDSL 317

Query: 190 AA 191
           + 
Sbjct: 318 SQ 319


>gi|311105517|ref|YP_003978370.1| tetratricopeptide repeat family protein 6 [Achromobacter
           xylosoxidans A8]
 gi|310760206|gb|ADP15655.1| tetratricopeptide repeat family protein 6 [Achromobacter
           xylosoxidans A8]
          Length = 823

 Score = 38.9 bits (90), Expect = 0.75,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 51/137 (37%), Gaps = 19/137 (13%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM-SAFVQYSAGKYQQAASLGEEYIT 122
           A  +   Q + +A   +   +R+ P     R   +M  A      G+Y +A +   +++ 
Sbjct: 107 ARAYRDLQRWPEALAAYQAGARNHPGQSAFRAGEIMTLADA----GRYPEARAAAAQWLK 162

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
           ++P   +       + +SY          Q      L      +    N+PYV   R Y+
Sbjct: 163 RHPRDVDA-----RLALSYVHAR------QGEPYEALHQADLALAAAPNTPYV--LREYI 209

Query: 183 TVG-RNQLAAKEVEIGR 198
               R ++A   +E+ R
Sbjct: 210 HALQRARMADVALELAR 226


>gi|307154100|ref|YP_003889484.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822]
 gi|306984328|gb|ADN16209.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822]
          Length = 214

 Score = 38.9 bits (90), Expect = 0.75,   Method: Composition-based stats.
 Identities = 20/155 (12%), Positives = 49/155 (31%), Gaps = 24/155 (15%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           ++ +  + +  + +V  L                      +E+ +       ++NF++A 
Sbjct: 6   KMLRQLMPVLLAFSVTALS----------LPAVAGKQPTIQELIKAGTQAATQKNFAEAE 55

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
             + +    +P   VA           Y  GK ++A+   +  I  YP     +Y     
Sbjct: 56  RIYRRAVELYPDDSVAN---YNLGTALYDQGKLEEASMSFKRAILIYP-----EYA---- 103

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
             +    +  V  DQ   +  +      ++    +
Sbjct: 104 --AAYNNLGSVLSDQGKFEEAILNFEIAIKLDPKN 136


>gi|162451187|ref|YP_001613554.1| hypothetical protein sce2915 [Sorangium cellulosum 'So ce 56']
 gi|161161769|emb|CAN93074.1| hypothetical protein sce2915 [Sorangium cellulosum 'So ce 56']
          Length = 1289

 Score = 38.9 bits (90), Expect = 0.75,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 53/170 (31%), Gaps = 31/170 (18%)

Query: 74  SKAYEYFNQCSRDFP-------------FAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
            +A +Y+      +P               G   + L   A+    A + + A  +  E 
Sbjct: 193 KQAIKYYTDLKTQYPKYCQSTNAADPAKSTGCTDEVLYYLAYEYEQAQQLEDARKVYFEL 252

Query: 121 ITQYPESKNVDYVYYLVGMSYAQM-IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           I  +P SK +   Y    +++ ++   +   D     L  Q   ++      + Y     
Sbjct: 253 IKNWPNSKYIPNAY----LAFGELFFNEAQGDPSKWDLAEQSYVKV------TQYPPPEN 302

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
                   +L       G  Y  +G++  AI  F+  +      +    A
Sbjct: 303 KVWGYAHYKL-------GYVYWNKGDFARAISEFKKTIEYGQQFQQMPNA 345


>gi|157154865|ref|YP_001465000.1| cellulose synthase subunit BcsC [Escherichia coli E24377A]
 gi|157076895|gb|ABV16603.1| cellulose synthase operon protein C [Escherichia coli E24377A]
          Length = 1140

 Score = 38.9 bits (90), Expect = 0.75,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 76/233 (32%), Gaps = 30/233 (12%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 426 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 482

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQM----IRDVPYDQ 152
             +   + AG+  QA +L      Q P      Y Y  YL G  + +     I  +P  Q
Sbjct: 483 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDHDRAALAHINSLPRAQ 542

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIGRYY 200
                    +  +V R   S  V      +   G+   A             ++ +  + 
Sbjct: 543 WN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLADWA 596

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 597 QQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 646



 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 339 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 395

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 396 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 441

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 442 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 490

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + ++ P      Y   L
Sbjct: 491 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 520


>gi|39996877|ref|NP_952828.1| type II secretion system protein [Geobacter sulfurreducens PCA]
 gi|39983765|gb|AAR35155.1| type II secretion system protein, putative [Geobacter
           sulfurreducens PCA]
 gi|298505890|gb|ADI84613.1| type II secretion system secretin lipoprotein PulQ [Geobacter
           sulfurreducens KN400]
          Length = 822

 Score = 38.9 bits (90), Expect = 0.75,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 58/201 (28%), Gaps = 48/201 (23%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +   A     ++ + FL G     +                 + KA    +E    +A  
Sbjct: 1   MRTIANMAIAAVVLTFLAGCTAGLT----------------AFNKAEKLEEEGKLDEAVM 44

Query: 79  YFNQCSRDFP-FAGVAR---KSLLMSAFVQYSAGK-------YQQAASLGEEYITQYP-- 125
            F + +   P          K+   +AF     G          +A    +  ++  P  
Sbjct: 45  KFAEAASTNPQQTEYRMRLLKASEKAAFEHLKNGDTAYEQQLLDEALREYQSAVSLNPAL 104

Query: 126 -----ESKNVDYV-----YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
                 S  +  V     YY  G+ + +  +         +  LQ   + ++    +  +
Sbjct: 105 ARAKQRSDELIRVRNSLTYYREGLEFEKSNK--------PREALQAYRKALDLNPGNKEI 156

Query: 176 KGARFYVTVGRN-QLAAKEVE 195
           K A   +   R  +L   E+ 
Sbjct: 157 KEALEKLLQTRRTKLEGFELN 177


>gi|282880108|ref|ZP_06288828.1| tetratricopeptide repeat protein [Prevotella timonensis CRIS 5C-B1]
 gi|281305981|gb|EFA98021.1| tetratricopeptide repeat protein [Prevotella timonensis CRIS 5C-B1]
          Length = 1123

 Score = 38.9 bits (90), Expect = 0.76,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 20/50 (40%)

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
            + ++  Y   EH + A   L   Y  L     A   V  ++ ++P+  W
Sbjct: 618 LRRLVEQYPTYEHMDLAYYHLFLLYSRLHQPTLANGYVQRLKTQFPKSEW 667


>gi|296109060|ref|YP_003616009.1| TPR repeat-containing protein [Methanocaldococcus infernus ME]
 gi|295433874|gb|ADG13045.1| TPR repeat-containing protein [Methanocaldococcus infernus ME]
          Length = 535

 Score = 38.9 bits (90), Expect = 0.76,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 6/81 (7%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A  +L +  + KA E + +         V+  +    AF  Y+   Y  A    ++ +  
Sbjct: 20  AEEYLDKGEYKKAVELYLKILERDGHLKVSDLA--NLAFAYYNLEDYNLALEFIDKALKI 77

Query: 124 YPESKNVDYVYYLVGMSYAQM 144
                      Y+ G++  ++
Sbjct: 78  ----SERPEFKYIKGITLYKL 94


>gi|224538028|ref|ZP_03678567.1| hypothetical protein BACCELL_02917 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224520375|gb|EEF89480.1| hypothetical protein BACCELL_02917 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 991

 Score = 38.9 bits (90), Expect = 0.76,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 65/172 (37%), Gaps = 12/172 (6%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               +Q+A ++ E  I Q+P+    D  YY + ++       + Y ++      +Y + +
Sbjct: 614 RMHDFQRAEAMFERLIRQFPDFAQADEAYYQLFLTELA----IEYYEKKGSSAEKYKAEL 669

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKE----VEIGRY-YLKRGEYVAAIPRFQLVLAN- 219
           + R+  S Y K          N +  K+    + +  Y + + G+  A +   + + +  
Sbjct: 670 IARFPESRYAKTLADP-DFAENAVHGKQREDSLYVRAYEHFQMGD-TATVRAAEHLSSEI 727

Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           Y   +H  + M       +     +     +  + ++YPQ         ++K
Sbjct: 728 YPLGQHRPKFMFLEAVTRLQGGETERFLATLKELVQQYPQNEITDLAAHILK 779



 Score = 38.6 bits (89), Expect = 0.90,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 45/144 (31%), Gaps = 35/144 (24%)

Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
             Y  GM +   + D                R++ ++ +      A + + +        
Sbjct: 603 ALYGAGMVFKDRMHDFQR-------AEAMFERLIRQFPDFAQADEAYYQLFLT------- 648

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA------------------EEAMARLV 234
           E+ I  YY K+G   +A      ++A + ++ +A                  E+++    
Sbjct: 649 ELAI-EYYEKKGS--SAEKYKAELIARFPESRYAKTLADPDFAENAVHGKQREDSLYVRA 705

Query: 235 EAYVALALMDEAREVVSLIQERYP 258
             +  +      R    L  E YP
Sbjct: 706 YEHFQMGDTATVRAAEHLSSEIYP 729


>gi|95928344|ref|ZP_01311092.1| TPR repeat [Desulfuromonas acetoxidans DSM 684]
 gi|95135615|gb|EAT17266.1| TPR repeat [Desulfuromonas acetoxidans DSM 684]
          Length = 581

 Score = 38.9 bits (90), Expect = 0.76,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 43/113 (38%), Gaps = 19/113 (16%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY----EKAVLFLKEQNFSKAYEYFN 81
           +   +A  F  GW       V+L         +E++    ++     ++Q+++ A E F+
Sbjct: 316 LAVLVAAGFRRGWLLMLCLLVWLPQPAHALQWKELWRNDNQRGQQAFEQQDYATAEEQFD 375

Query: 82  ----QCSRDFPFAGVARKSLL----MSAFVQY-------SAGKYQQAASLGEE 119
               + S  +      +   L     +A   Y        +G+YQQA +  EE
Sbjct: 376 DPAWKASALYRQGNFDQAEKLWQDNDTADAWYNRGNALAKSGQYQQAINAYEE 428


>gi|77460971|ref|YP_350478.1| hypothetical protein Pfl01_4750 [Pseudomonas fluorescens Pf0-1]
 gi|77384974|gb|ABA76487.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
          Length = 574

 Score = 38.9 bits (90), Expect = 0.76,   Method: Composition-based stats.
 Identities = 43/275 (15%), Positives = 86/275 (31%), Gaps = 76/275 (27%)

Query: 41  QSSRDVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQC---------------- 83
             ++  +   V       E+ Y  A++ L+ + + +A  Y                    
Sbjct: 270 DDAKVEFSTLVQQYPEDDELRYSLALVCLEAKAWDEAKGYLEDLIARESHVDSAHLNLGR 329

Query: 84  ---SRDFPFA---GVAR--------KSLLMSAFVQYSAGKYQQAAS--LGEEYITQYPES 127
               R+ P       A+         + L  A +  + GK  +A S    E         
Sbjct: 330 IAEERNDPQGALIEYAQVGPGNDYLPAQLRQADILMNNGKTAEAQSKLAAER-------D 382

Query: 128 KNVDYV--YYLV---GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
           +  DY    YL+    +S                   + + + +++Y +   +   R   
Sbjct: 383 EQPDYAIQLYLIEAETLSANNQGD----------KAWKVLQQALQQYPDDLNLLYTRAMQ 432

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVA-AIPRFQLVLANYSDAEHAEEAMARLVEAYV--- 238
              RN LA  E ++ R  +KR    A A+      L++        EA A + +A+    
Sbjct: 433 AEKRNDLAQMEKDL-RLIIKRDPDNAMALNALGYTLSD--RTTRYAEAKALIEQAHQINP 489

Query: 239 --------------ALALMDEAREVVSLIQERYPQ 259
                          +  +++A + +    ER+P 
Sbjct: 490 EDPAVLDSLGWVNFRMGNLEDAEKYLRQALERFPD 524


>gi|291406321|ref|XP_002719506.1| PREDICTED: cell division cycle protein 27 isoform 1 [Oryctolagus
           cuniculus]
          Length = 824

 Score = 38.9 bits (90), Expect = 0.77,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 586 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 635

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178
           N    +Y +GM Y +  +     +   +  L    +          +      S      
Sbjct: 636 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 691

Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                V   +N L               +Y +A+   + +                + + 
Sbjct: 692 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 746

Query: 237 YVALALMDEA 246
           Y  L     A
Sbjct: 747 YKKLGQTHLA 756


>gi|288929510|ref|ZP_06423354.1| putative TPR domain protein [Prevotella sp. oral taxon 317 str.
           F0108]
 gi|288329015|gb|EFC67602.1| putative TPR domain protein [Prevotella sp. oral taxon 317 str.
           F0108]
          Length = 1135

 Score = 38.9 bits (90), Expect = 0.77,   Method: Composition-based stats.
 Identities = 18/169 (10%), Positives = 48/169 (28%), Gaps = 12/169 (7%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
                  +          YP+   +   YY + + Y +    V           +Y   +
Sbjct: 609 KLDNLALSEKALRRLTDNYPQFDKMPQAYYHLFLLYMRKGDKVT--------AQRYADML 660

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAK---EVEIGRY-YLKRGEYVAAIPRFQLVLANYS 221
            ++Y      +           Q        +    Y + K   Y A     ++    + 
Sbjct: 661 KQQYPKHELTELITDPYYFANAQRGEHIEDSLYAVTYDFFKAENYAAVKRNAKVSATKFK 720

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
              + ++ +     + +    +D     +  + E++PQ   ++    +V
Sbjct: 721 HGANRDKFLFVEALSMLHAGNIDACLNGLQTLVEQFPQSELSKMAAMIV 769


>gi|257457649|ref|ZP_05622816.1| tetratricopeptide repeat domain protein [Treponema vincentii ATCC
           35580]
 gi|257445035|gb|EEV20111.1| tetratricopeptide repeat domain protein [Treponema vincentii ATCC
           35580]
          Length = 715

 Score = 38.9 bits (90), Expect = 0.77,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 24/75 (32%), Gaps = 6/75 (8%)

Query: 7   RAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVL 66
           R    F+ W   +++F      S     L+      S       VT       +Y+    
Sbjct: 595 RQKQTFKYWF--MHRFLPVAVMSAIALILIFCISVLSWQFIYKPVT----AESLYKTGYA 648

Query: 67  FLKEQNFSKAYEYFN 81
           +L    +  A E FN
Sbjct: 649 YLDNGQYETAIEKFN 663


>gi|170750693|ref|YP_001756953.1| TPR repeat-containing protein [Methylobacterium radiotolerans JCM
           2831]
 gi|170657215|gb|ACB26270.1| TPR repeat-containing protein [Methylobacterium radiotolerans JCM
           2831]
          Length = 306

 Score = 38.9 bits (90), Expect = 0.77,   Method: Composition-based stats.
 Identities = 9/68 (13%), Positives = 17/68 (25%), Gaps = 9/68 (13%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           +A    +   +  A   F    R          +          AG    A +  +E + 
Sbjct: 74  RAAALYEAGRYGDAIALFRAGGRR---------ASYNLGNALAKAGDLDGALAAYDEALR 124

Query: 123 QYPESKNV 130
             P   + 
Sbjct: 125 FNPRDADA 132


>gi|13324594|gb|AAK18800.1|AF305608_1 LMP1 [Borrelia burgdorferi]
          Length = 1065

 Score = 38.9 bits (90), Expect = 0.77,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 44/220 (20%)

Query: 62   EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLG 117
            +  ++     NF ++ EY N       F   A+K    ++   +  ++   K +++    
Sbjct: 827  KAGIVSNNLGNFKQSEEYLNF------FNANAKKPNEIAIYNLSIAKFENNKLEESLETI 880

Query: 118  EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYV 175
             + I   P  +  +Y  YL      +            +  +   S ++E+     S Y+
Sbjct: 881  NKAIDLNP--EKSEY-LYLKASINLKK--------ENYQNAISLYSLVIEKNPENTSAYI 929

Query: 176  KGARFYVTVGRNQLAAKEVE-------------IGRYYLKRGEYVAAIPRFQLVLANYSD 222
              A+ Y   G    A   +E             +G  Y K   Y  AI  F+  + N   
Sbjct: 930  NLAKAYEKSGNKSQAISTLEKIINKNNKLALNNLGILYKKEKNYQKAIEIFEKAIIN--- 986

Query: 223  AEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQ 259
                 EA   L    + +     A++++     ++   P+
Sbjct: 987  --SDIEAKYNLATTLIEINDNTRAKDLLREYTKLKPNNPE 1024



 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 3/62 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y KA + LK++N+  A   ++      P       + +  A     +G   QA S  E+
Sbjct: 894 LYLKASINLKKENYQNAISLYSLVIEKNPEN---TSAYINLAKAYEKSGNKSQAISTLEK 950

Query: 120 YI 121
            I
Sbjct: 951 II 952


>gi|167466175|ref|NP_001247.3| cell division cycle protein 27 homolog isoform 2 [Homo sapiens]
 gi|12644198|sp|P30260|CDC27_HUMAN RecName: Full=Cell division cycle protein 27 homolog; AltName:
           Full=Anaphase-promoting complex subunit 3; Short=APC3;
           AltName: Full=CDC27 homolog; Short=CDC27Hs; AltName:
           Full=H-NUC
 gi|998472|gb|AAB34378.1| H-NUC [Homo sapiens]
 gi|40786801|gb|AAR89911.1| cell division cycle 27 [Homo sapiens]
 gi|119578093|gb|EAW57689.1| cell division cycle 27, isoform CRA_d [Homo sapiens]
 gi|168275840|dbj|BAG10640.1| cell division cycle protein 27 homolog [synthetic construct]
          Length = 824

 Score = 38.9 bits (90), Expect = 0.77,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 586 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 635

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178
           N    +Y +GM Y +  +     +   +  L    +          +      S      
Sbjct: 636 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 691

Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                V   +N L               +Y +A+   + +                + + 
Sbjct: 692 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 746

Query: 237 YVALALMDEA 246
           Y  L     A
Sbjct: 747 YKKLGQTHLA 756


>gi|330834799|ref|YP_004409527.1| hypothetical protein Mcup_0938 [Metallosphaera cuprina Ar-4]
 gi|329566938|gb|AEB95043.1| conserved hypothetical protein [Metallosphaera cuprina Ar-4]
          Length = 668

 Score = 38.9 bits (90), Expect = 0.77,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 39/128 (30%), Gaps = 14/128 (10%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           +        +       Y K  +      F +A E  N   +  P     R       ++
Sbjct: 476 KSYDEKIRENPNNPEYYYAKGKVLSNLNRFEEALEELNNAIKLNPNNPEYRFGK---GYL 532

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
            Y   +Y++A       I   P  KN  Y YY  G++Y  + R            ++  +
Sbjct: 533 LYELYRYEEALEELNNAIKLNP--KNSKYHYY-KGLTYYYLDRPDD--------SIKEFN 581

Query: 164 RIVERYTN 171
             +    +
Sbjct: 582 NAINLNPD 589



 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 38/260 (14%), Positives = 82/260 (31%), Gaps = 27/260 (10%)

Query: 7   RAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVL 66
           R   +      +L     +   + +V  ++  ERQ + D   +  T      + Y+K+  
Sbjct: 187 RRFGLKPLEYEKLKSAISSSDSNASVKGVIFPERQRNNDNVSNIETVWNSAEDYYKKSKE 246

Query: 67  FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
                   +A +  ++  R  P+     +   +   + Y   + + A     + I Q P 
Sbjct: 247 LFDNGKHDEALKEIDKAMRLDPYKP---EYHFLKGLILYDVHENEDAIEAFYKAIRQNPN 303

Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
           +    Y YY  G +  ++ +                 R+ ++                  
Sbjct: 304 NPE--Y-YYFKGKALYEVKKY-----EDALEAFDNAIRLNDKRPE-----------YYFF 344

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
              A  E++  RY       + A+ + +  +    D      A     EA   L   ++A
Sbjct: 345 KGEALYELK--RYNDAYKVLIKAVEKLEEEIKRKPDNPFYYWA---KGEALYELKRYNDA 399

Query: 247 REVVSLIQERYPQGYWARYV 266
            EV++      P     R++
Sbjct: 400 IEVLNRAISLNPDNSEYRFL 419


>gi|297716050|ref|XP_002834360.1| PREDICTED: cell division cycle protein 27 homolog isoform 1 [Pongo
           abelii]
          Length = 824

 Score = 38.9 bits (90), Expect = 0.77,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 586 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 635

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178
           N    +Y +GM Y +  +     +   +  L    +          +      S      
Sbjct: 636 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 691

Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                V   +N L               +Y +A+   + +                + + 
Sbjct: 692 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 746

Query: 237 YVALALMDEA 246
           Y  L     A
Sbjct: 747 YKKLGQTHLA 756


>gi|296127389|ref|YP_003634641.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
 gi|296019205|gb|ADG72442.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
          Length = 425

 Score = 38.9 bits (90), Expect = 0.77,   Method: Composition-based stats.
 Identities = 20/142 (14%), Positives = 44/142 (30%), Gaps = 14/142 (9%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
           +G   ++  D       +  Y    Y +A+          A + ++  +    F      
Sbjct: 287 LGLYEEAISDFDTALNIEPSYIDAYYNRALAKNNLGLHEYAVKDYDIVTE---FDNNNID 343

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +    A   Y+   Y++A    ++ I   P+S +    Y   G +   M           
Sbjct: 344 AYYNKALSYYNLSDYKEALKNYDKVIELNPQSAD---AYNNRGFTKYCM--------GLY 392

Query: 156 KLMLQYMSRIVERYTNSPYVKG 177
           +  L+   + +E   +    K 
Sbjct: 393 QEALKDYDKAIEINPDYERAKQ 414


>gi|225548523|ref|ZP_03769571.1| tetratricopeptide repeat domain protein [Borrelia burgdorferi 94a]
 gi|225370786|gb|EEH00221.1| tetratricopeptide repeat domain protein [Borrelia burgdorferi 94a]
          Length = 1065

 Score = 38.9 bits (90), Expect = 0.77,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 44/220 (20%)

Query: 62   EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLG 117
            +  ++     NF ++ EY N       F   A+K    ++   +  ++   K +++    
Sbjct: 827  KAGIVSNNLGNFKQSEEYLNF------FNANAKKPNEIAIYNLSIAKFENNKLEESLETI 880

Query: 118  EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYV 175
             + I   P  +  +Y  YL      +            +  +   S ++E+     S Y+
Sbjct: 881  NKAIDLNP--EKSEY-LYLKASINLKK--------ENYQNAISLYSLVIEKNPENTSAYI 929

Query: 176  KGARFYVTVGRNQLAAKEVE-------------IGRYYLKRGEYVAAIPRFQLVLANYSD 222
              A+ Y   G    A   +E             +G  Y K   Y  AI  F+  + N   
Sbjct: 930  NLAKAYEKSGNKSQAISTLEKIINKNNKLALNNLGILYKKEKNYQKAIEIFEKAIIN--- 986

Query: 223  AEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQ 259
                 EA   L    + +     A++++     ++   P+
Sbjct: 987  --SDIEAKYNLATTLIEINDNTRAKDLLREYTKLKPNNPE 1024



 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 3/62 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y KA + LK++N+  A   ++      P       + +  A     +G   QA S  E+
Sbjct: 894 LYLKASINLKKENYQNAISLYSLVIEKNPEN---TSAYINLAKAYEKSGNKSQAISTLEK 950

Query: 120 YI 121
            I
Sbjct: 951 II 952


>gi|144897512|emb|CAM74376.1| TPR repeat [Magnetospirillum gryphiswaldense MSR-1]
          Length = 731

 Score = 38.9 bits (90), Expect = 0.77,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 50/156 (32%), Gaps = 21/156 (13%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQN----FSKAYEYFNQCS-----RDFPFAGVARKSLLMS 100
             +  R  R    +A + L+ +       +A     +        DF +  + R S LM 
Sbjct: 371 EDSASRPDRAYAARARIELQLKRGLISAGEAIAQLEKLRFAWRGEDFEYQLLKRLSELMV 430

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS--YAQMIRDVPYDQRATKLM 158
           A       +Y  A  L    ++ +PE  +V  V     MS  + ++      D  +    
Sbjct: 431 ADA-----RYADALRLMRTVVSNFPEHPDVPNVQ--QAMSDTFEKLFLGGLADNLSAFAA 483

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
           +       +   +          +    ++LA  ++
Sbjct: 484 IGLFDEFQDLTPS---GTKGDEMIRKLADRLAQVDL 516


>gi|114666430|ref|XP_511624.2| PREDICTED: cell division cycle protein 27 homolog isoform 5 [Pan
           troglodytes]
          Length = 824

 Score = 38.9 bits (90), Expect = 0.77,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 586 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 635

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178
           N    +Y +GM Y +  +     +   +  L    +          +      S      
Sbjct: 636 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 691

Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                V   +N L               +Y +A+   + +                + + 
Sbjct: 692 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 746

Query: 237 YVALALMDEA 246
           Y  L     A
Sbjct: 747 YKKLGQTHLA 756


>gi|302812259|ref|XP_002987817.1| hypothetical protein SELMODRAFT_447134 [Selaginella moellendorffii]
 gi|300144436|gb|EFJ11120.1| hypothetical protein SELMODRAFT_447134 [Selaginella moellendorffii]
          Length = 667

 Score = 38.9 bits (90), Expect = 0.78,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 59/197 (29%), Gaps = 45/197 (22%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSA--GKYQQAAS--- 115
           +  + +  + F +A   F++  R  P  +   + ++L      Q+S     Y +A     
Sbjct: 243 RGQVRVDAKRFEEAVADFDEAIRRQPGNYRAYSGRALAFEGLAQWSNAVADYTEALQRGR 302

Query: 116 LGEEYITQYPESKNVDYVYYLVG--MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
               Y           YV    G  ++     ++   D  A+    Q    +      + 
Sbjct: 303 AATGYRD--------PYVMNSRGNALASLGRYKEALRDYSASFDAFQDARELD----GAI 350

Query: 174 YVK--GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
           Y K   A   + VG      KE+            +A   R          +     A+ 
Sbjct: 351 YAKANAALMRIQVGDEANGLKEL------------LAVARRA-------PGSIDMRAAL- 390

Query: 232 RLVEAYVALALMDEARE 248
                Y ++   +EA +
Sbjct: 391 --AAVYWSMGRANEAED 405


>gi|281350105|gb|EFB25689.1| hypothetical protein PANDA_017323 [Ailuropoda melanoleuca]
          Length = 790

 Score = 38.9 bits (90), Expect = 0.78,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 579 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 628

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178
           N    +Y +GM Y +  +     +   +  L    +          +      S      
Sbjct: 629 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 684

Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                V   +N L               +Y +A+   + +                + + 
Sbjct: 685 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 739

Query: 237 YVALALMDEA 246
           Y  L     A
Sbjct: 740 YKKLGQTHLA 749


>gi|195952740|ref|YP_002121030.1| Tetratricopeptide TPR_2 repeat protein [Hydrogenobaculum sp.
           Y04AAS1]
 gi|195932352|gb|ACG57052.1| Tetratricopeptide TPR_2 repeat protein [Hydrogenobaculum sp.
           Y04AAS1]
          Length = 149

 Score = 38.9 bits (90), Expect = 0.78,   Method: Composition-based stats.
 Identities = 11/69 (15%), Positives = 26/69 (37%), Gaps = 3/69 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            ++      KE+ +  A +Y+ +     P       ++   A+  Y  G + +A     +
Sbjct: 65  YFDLGNALFKEKKYKDAIKYYEKAIEINP---KNEDAMNNLAYTYYKLGDFTKAKFYVLK 121

Query: 120 YITQYPESK 128
            +   P +K
Sbjct: 122 ALKLEPTNK 130


>gi|170743313|ref|YP_001771968.1| TPR repeat-containing protein [Methylobacterium sp. 4-46]
 gi|168197587|gb|ACA19534.1| Tetratricopeptide TPR_2 repeat protein [Methylobacterium sp. 4-46]
          Length = 200

 Score = 38.9 bits (90), Expect = 0.78,   Method: Composition-based stats.
 Identities = 18/133 (13%), Positives = 36/133 (27%), Gaps = 25/133 (18%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +  +A   LK+++ + A E  ++     P    G +R++        Y       A +  
Sbjct: 83  LASRAGQALKDKDAALAVELLDRVVTLEPGWAEGWSRRAT-----AFYLLDDQASALADL 137

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
              +   P             +++  M  D        +  L    R    Y        
Sbjct: 138 HRALQLEPRHFEA-----WSALAHLYMASD------DKERALAAFRRAEAIYPR------ 180

Query: 178 ARFYVTVGRNQLA 190
               +      LA
Sbjct: 181 -MGKLREAIEHLA 192


>gi|126668391|ref|ZP_01739348.1| hypothetical protein MELB17_14658 [Marinobacter sp. ELB17]
 gi|126627100|gb|EAZ97740.1| hypothetical protein MELB17_14658 [Marinobacter sp. ELB17]
          Length = 258

 Score = 38.9 bits (90), Expect = 0.78,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 46/129 (35%), Gaps = 14/129 (10%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
              I D+  +Q+     +  +   ++ Y        A +++              G  YL
Sbjct: 137 YNSIVDLIRNQKKYDQAITQIYEFLDTYPEGDLTVNAYYWL--------------GEVYL 182

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + +   A   F +V   ++D   A ++  +L      L   +EA   +  + + YP   
Sbjct: 183 VKPQLEQAKQAFSIVATRFADHRKAADSTYKLGVTLDRLGEKEEAGRRMQTVVKNYPDSS 242

Query: 262 WARYVETLV 270
            A+  ++ +
Sbjct: 243 AAKLAQSYL 251



 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 54/186 (29%), Gaps = 60/186 (32%)

Query: 49  DSVTDVRYQREVYEKAVLFL-KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           D       + + Y   V  +  ++ + +A                         +     
Sbjct: 125 DYRQPSAEESKAYNSIVDLIRNQKKYDQAITQ---------------------IY----- 158

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
                      E++  YPE       YY +G  Y    +         +   Q  S +  
Sbjct: 159 -----------EFLDTYPEGDLTVNAYYWLGEVYLVKPQ--------LEQAKQAFSIVAT 199

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
           R+ +      + + + V  ++L  KE               A  R Q V+ NY D+  A+
Sbjct: 200 RFADHRKAADSTYKLGVTLDRLGEKE--------------EAGRRMQTVVKNYPDSSAAK 245

Query: 228 EAMARL 233
            A + L
Sbjct: 246 LAQSYL 251


>gi|13324576|gb|AAK18791.1|AF305599_1 LMP1 [Borrelia burgdorferi]
          Length = 849

 Score = 38.9 bits (90), Expect = 0.78,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 44/220 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLG 117
           +  ++     NF ++ EY N       F   A+K    ++   +  ++   K +++    
Sbjct: 611 KAGIVSNNLGNFKQSEEYLNF------FNANAKKPNEIAIYNLSIAKFENNKLEESLETI 664

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYV 175
            + I   P  +  +Y  YL      +            +  +   S ++E+     S Y+
Sbjct: 665 NKAIDLNP--EKSEY-LYLKASINLKK--------ENYQNAISLYSLVIEKNPENTSAYI 713

Query: 176 KGARFYVTVGRNQLAAKEVE-------------IGRYYLKRGEYVAAIPRFQLVLANYSD 222
             A+ Y   G    A   +E             +G  Y K   Y  AI  F+  + N   
Sbjct: 714 NLAKAYEKSGNKSQAISTLEKIINKNNKLALNNLGILYKKEKNYQKAIEIFEKAIIN--- 770

Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQ 259
                EA   L    + +     A++++     ++   P+
Sbjct: 771 --SDIEAKYNLATTLIEINDNTRAKDLLREYTKLKPNNPE 808



 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 3/62 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y KA + LK++N+  A   ++      P       + +  A     +G   QA S  E+
Sbjct: 678 LYLKASINLKKENYQNAISLYSLVIEKNPEN---TSAYINLAKAYEKSGNKSQAISTLEK 734

Query: 120 YI 121
            I
Sbjct: 735 II 736


>gi|327263209|ref|XP_003216413.1| PREDICTED: tetratricopeptide repeat protein 37-like isoform 1
           [Anolis carolinensis]
          Length = 1566

 Score = 38.9 bits (90), Expect = 0.79,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 57/150 (38%), Gaps = 7/150 (4%)

Query: 11  IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE-VYEKAVLFLK 69
           ++EA + Q +K     F ++A+  L G +        LD V D     + +  K   +L 
Sbjct: 339 LYEASSLQQHKERACCFKAVALLRLPGSDAADEAINSLDQVLDKNNNPKCIALKGQAYLN 398

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
           +    +A +   +     P   +A  +  +   +QY    Y QA +  +  I    +   
Sbjct: 399 KGLTGEASKIAQELKVTHP--DLAE-ADYLEGLIQYKEKNYSQAETSFQRAIE---KETE 452

Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
           +   ++ +G++Y  M  +   D+       
Sbjct: 453 MADFHFCLGLTYWFMSEETRKDKSKALTQF 482


>gi|297482483|ref|XP_002692844.1| PREDICTED: sperm associated antigen 1 [Bos taurus]
 gi|296480492|gb|DAA22607.1| sperm associated antigen 1 [Bos taurus]
          Length = 974

 Score = 38.9 bits (90), Expect = 0.79,   Method: Composition-based stats.
 Identities = 12/117 (10%), Positives = 36/117 (30%), Gaps = 17/117 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           EK     K  ++ +A +Y+ +     P  A    ++             +  A    E+ 
Sbjct: 215 EKGNEAFKSGDYEEAVKYYTRSLSVLPTVAAYNNRAQAEL-----KLQNWNSAFQDCEKV 269

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           +   P +            +Y    +         +  ++ +++++    ++   K 
Sbjct: 270 LELEPGNLK---ALLRRATTYKHQNK--------LQEAIEDLNKVLAVEPDNELAKK 315


>gi|296132604|ref|YP_003639851.1| TPR repeat-containing protein [Thermincola sp. JR]
 gi|296031182|gb|ADG81950.1| TPR repeat-containing protein [Thermincola potens JR]
          Length = 196

 Score = 38.9 bits (90), Expect = 0.79,   Method: Composition-based stats.
 Identities = 30/218 (13%), Positives = 65/218 (29%), Gaps = 33/218 (15%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAY 77
           ++  ++  FF +  C     + +   D Y   +         Y     +  +++ +  A 
Sbjct: 9   IFLISVICFFLLTGC-WTKTQGEKRIDYYKGLIEQEPNNPVHYTNLGRVLFEQKKYEDAI 67

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
             F    +  P    A       A V ++  ++Q++ +  ++ +   P           +
Sbjct: 68  TCFKAALKINPNDSTAH---YNLALVYFAREEWQKSRAELDKILKAQPNHTL---ALLQL 121

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
           G    +            +   Q   +  +    S     A   +              G
Sbjct: 122 GEVNLKS--------ENYEEARQTFKKCWKLEPTS---ASALKGL--------------G 156

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
             Y+   +Y  A   ++L L    D     EA+ RL E
Sbjct: 157 DSYVGLKQYEKAKAAYKLALRYVPDYGEVREALRRLEE 194


>gi|289662889|ref|ZP_06484470.1| hypothetical protein XcampvN_07338 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 251

 Score = 38.9 bits (90), Expect = 0.79,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 44/130 (33%), Gaps = 19/130 (14%)

Query: 64  AVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           A   L + ++++A E++       +         +L  A  Q+  G+ QQA    +  I 
Sbjct: 95  AETLLAQGDYAQAAEHYQGALRGLY---RDDPHLMLGLAKAQFGLGQPQQARQTLDALIA 151

Query: 123 QYPESKNVD-YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
             P  ++ D ++ Y   +           D   T+  L     + + Y      + AR  
Sbjct: 152 ANPSFRSHDGHLLYARAV----------EDSGDTEAALHEYETLAQGYP----GEEARVR 197

Query: 182 VTVGRNQLAA 191
                 + A 
Sbjct: 198 YAQLLQRTAR 207


>gi|215488807|ref|YP_002331238.1| cellulose synthase subunit BcsC [Escherichia coli O127:H6 str.
           E2348/69]
 gi|215266879|emb|CAS11320.1| cellulose synthase subunit [Escherichia coli O127:H6 str. E2348/69]
          Length = 1157

 Score = 38.9 bits (90), Expect = 0.79,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 79/235 (33%), Gaps = 34/235 (14%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK-----------EVEIGR 198
             Q         +  +V R  N   ++ A      G+   A             ++ +  
Sbjct: 557 RAQWN-----SNIQELVNRLQNDQVLETANRLRENGKEAEAEAMLRQQPPSSRIDLTLAD 611

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +  +R +Y AA   +Q VLA         +A+  L E  +A      AR  ++ +
Sbjct: 612 WAQQRRDYTAARAAYQNVLAREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 663


>gi|182677316|ref|YP_001831462.1| TPR repeat-containing protein [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182633199|gb|ACB93973.1| TPR repeat-containing protein [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 301

 Score = 38.9 bits (90), Expect = 0.79,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 68/221 (30%), Gaps = 41/221 (18%)

Query: 49  DSVTDVRYQREVYE-KAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQY 105
           D V+      E Y+ + V + K   +S+A   F+Q  +  P        ++L        
Sbjct: 76  DVVSRNPRSSEAYDTRGVAYAKLGKYSEAISDFSQAIKLDPNNAPAYTNRAL-----AYR 130

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
            + +   A +     I   P         YL G +       +   Q         + + 
Sbjct: 131 QSNRNDAALADFNRAIEVNPRHAPA----YL-GRAN------LLRVQGNLDEAKSDLDQA 179

Query: 166 VERYTNSPYV--------------KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           ++    +                   A        ++    +   G  YL RG+ + A  
Sbjct: 180 IKLNPENAQAFHARGLIYQREGNQPQAITDFDNAIDR----DPFAGAPYLARGQSLIATG 235

Query: 212 RFQLVLANYSDAEHA----EEAMARLVEAYVALALMDEARE 248
           ++   + +++ A H      +A A L  AY       +A E
Sbjct: 236 KYDKAIEDFNAALHVDNKNPDAWAGLGLAYEKSGNRTKAAE 276


>gi|124006312|ref|ZP_01691147.1| TPR repeat [Microscilla marina ATCC 23134]
 gi|123988236|gb|EAY27894.1| TPR repeat [Microscilla marina ATCC 23134]
          Length = 403

 Score = 38.9 bits (90), Expect = 0.79,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 6/79 (7%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            Y +  L L+ Q+F  A   F++  +  P      K+ L    +++  G Y+ A +  ++
Sbjct: 303 YYSRGGLRLQAQDFKAALADFDKIIQLKP---KDEKAYLTRGNIKFKLGDYKGALADFDQ 359

Query: 120 YITQYPESKNVDYVYYLVG 138
            I   P+S+     Y++ G
Sbjct: 360 AIKLAPKSRKG---YFMRG 375


>gi|156378172|ref|XP_001631018.1| predicted protein [Nematostella vectensis]
 gi|156218050|gb|EDO38955.1| predicted protein [Nematostella vectensis]
          Length = 1771

 Score = 38.9 bits (90), Expect = 0.79,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 46/116 (39%), Gaps = 8/116 (6%)

Query: 162  MSRIVERYTNSPYVKGARFYVTVGRNQLAAKE---VEIGRYYLKRGEYVAAIPRFQLVLA 218
               ++  YT S   + A         + +  +   +E GR+++K G+  +A    Q  L 
Sbjct: 1596 FFHLITIYTQSEKTELAEKLFHTMTKRFSQSKKVWIEFGRFFMKTGKPDSARKLLQRGLK 1655

Query: 219  NYSDAEHAEEAM-ARLVEAYVALALMDEAREVVSLIQERYPQGY--WARYVETLVK 271
            +    +H E  +   L+E           + V+  +   YP+    W+ Y++ + K
Sbjct: 1656 SLPTRKHVETIVQFALME--FKNGDPQRGQTVLESVLSNYPKRTDIWSVYIDMMSK 1709


>gi|73988166|ref|XP_851718.1| PREDICTED: similar to prolyl 4-hydroxylase, alpha III subunit
           precursor [Canis familiaris]
          Length = 544

 Score = 38.9 bits (90), Expect = 0.79,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 19/131 (14%)

Query: 11  IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKE 70
           + + +   +   A  +F  +A   +         D+Y           + ++   +    
Sbjct: 143 LQDVYMLNVKGLARGVFQRVAGSAVT--------DLYSPRRLFSLTADDCFQVGKVAYDM 194

Query: 71  QNFSKAYEYFNQCSRDF--PFAGVA-------RKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            ++  A  +  +    F   +             +L   AF  + AG    A SL  E++
Sbjct: 195 GDYYHAIPWLEEAVSLFRGSYGDWKTEDEASLEDALDHLAFAYFQAGNVSCALSLSREFL 254

Query: 122 TQY-PESKNVD 131
             Y P++K + 
Sbjct: 255 -LYSPDNKRMA 264


>gi|116623643|ref|YP_825799.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116226805|gb|ABJ85514.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 548

 Score = 38.9 bits (90), Expect = 0.79,   Method: Composition-based stats.
 Identities = 40/196 (20%), Positives = 59/196 (30%), Gaps = 26/196 (13%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           +   V   K  N+ KA + + Q +   P +    +S L     Q        A +  E  
Sbjct: 271 FNLGVAHHKMGNYDKAAQAYRQAASLQPSSA---QSHLNLGVAQQELNDLAGARASYEHA 327

Query: 121 ITQYPESK----NVDYVYYLVGMSYA--QMIRDVPYDQRATKLM---LQYMSRIVERYTN 171
           +   P       N+  V    G      ++   +  D          L Y+  +   Y N
Sbjct: 328 LNIDPNQSGVLWNLALVLEQQGERQWAEKLYARINEDAPEWGDACFRLGYLRLLRGDYIN 387

Query: 172 SPYVKGA--RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
           S     A     +      L       G  Y + G   AA   FQ VL    D+  A   
Sbjct: 388 SAEAFEACLAHRLDWPEAHL-----NAGIAYARNGNAPAARKSFQEVLTLRPDSSDAVRG 442

Query: 230 MARLV-------EAYV 238
           +A L        EAY 
Sbjct: 443 LAALALEQEEFTEAYD 458


>gi|332297233|ref|YP_004439155.1| Tetratricopeptide TPR_1 repeat-containing protein [Treponema
            brennaborense DSM 12168]
 gi|332180336|gb|AEE16024.1| Tetratricopeptide TPR_1 repeat-containing protein [Treponema
            brennaborense DSM 12168]
          Length = 1129

 Score = 38.9 bits (90), Expect = 0.80,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 73/206 (35%), Gaps = 31/206 (15%)

Query: 65   VLFLKEQNFSKAYE-YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT- 122
            + +    +F +A + Y +     +              ++QYS   Y +A      +I  
Sbjct: 924  LDYFVSGDFDEALKNYLSAVQTQY----DTPSVRYKIGYIQYSKKNYAEALGS---FIKA 976

Query: 123  --QYPESKNVDYVYYLVGMSYAQMIRDVPY-DQRATKLMLQYMSRIVERY------TNSP 173
              Q     +V     L+ +     +R   +  Q   + +LQ +     RY       N+ 
Sbjct: 977  SEQNSSDPHV-----LIALGNVLSLRGNNFAAQGYYEKLLQLLDAERSRYGIMFPQVNTE 1031

Query: 174  YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
            +      Y+       A+  + + +Y L +    +A+   Q ++ N + +  A +A+ R 
Sbjct: 1032 HADIVDLYLK------ASNNLGVTQYRLAQQTGDSALN-AQAMV-NLTTSLRAWDALTRN 1083

Query: 234  VEAYVALALMDEAREVVSLIQERYPQ 259
             E  + L   + A   V+ +    P 
Sbjct: 1084 QETMIRLGGTNLAERNVAYMSHPVPD 1109


>gi|291406323|ref|XP_002719507.1| PREDICTED: cell division cycle protein 27 isoform 2 [Oryctolagus
           cuniculus]
          Length = 825

 Score = 38.9 bits (90), Expect = 0.80,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 587 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 636

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178
           N    +Y +GM Y +  +     +   +  L    +          +      S      
Sbjct: 637 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 692

Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                V   +N L               +Y +A+   + +                + + 
Sbjct: 693 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 747

Query: 237 YVALALMDEA 246
           Y  L     A
Sbjct: 748 YKKLGQTHLA 757


>gi|192358859|ref|YP_001983972.1| putative adenylate cyclase [Cellvibrio japonicus Ueda107]
 gi|190685024|gb|ACE82702.1| putative adenylate cyclase [Cellvibrio japonicus Ueda107]
          Length = 737

 Score = 38.9 bits (90), Expect = 0.80,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 91/258 (35%), Gaps = 44/258 (17%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAY 77
           + K  +++   +A  +    +  ++  +Y+ S+       + YE  A        + +A 
Sbjct: 464 IKKDNISVMLVLASVYSDMNDIGNAEKIYVLSIQKDPKNWKAYEHYAYFLTGRGRYDEAI 523

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD---YVY 134
           + + +     P    A       A   +    +++AA+  E+       + N+D   Y Y
Sbjct: 524 KLYEKIIDFVPDNSFALN---NIAINYFYKMDFKRAAAFFEK-------ASNIDPSGYSY 573

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS----PYVKGARFYVTVGRNQLA 190
              G  Y  +         A     +  S  ++   ++     Y+  A  +++ G+N+ A
Sbjct: 574 ANTGNMYYTL--------GAFDKAAEMYSEALQLEPDNYQYLAYLGDAYKHIS-GKNKQA 624

Query: 191 AKEVE-IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           ++  E + +Y        AA+ R         +   +  +   L  AY     + +A E+
Sbjct: 625 SECFERVIKY--------AAVDR--------QNNPRSARSYYYLARAYTYFGNLAKANEL 668

Query: 250 VSLIQERYPQGYWARYVE 267
           + +     P    A Y  
Sbjct: 669 MDIADGLEPNSTEANYTH 686


>gi|126308599|ref|XP_001376268.1| PREDICTED: similar to H-NUC [Monodelphis domestica]
          Length = 829

 Score = 38.9 bits (90), Expect = 0.80,   Method: Composition-based stats.
 Identities = 22/190 (11%), Positives = 47/190 (24%), Gaps = 38/190 (20%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 591 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 640

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178
           N    +Y +GM Y +  +     +   +  L    +          +      S      
Sbjct: 641 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 696

Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                +   +N L               +Y +A+   + +                + + 
Sbjct: 697 LNKAIIIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 751

Query: 237 YVALALMDEA 246
           Y  L     A
Sbjct: 752 YKKLGQTHLA 761


>gi|308812059|ref|XP_003083337.1| FOG: TPR repeat (ISS) [Ostreococcus tauri]
 gi|116055217|emb|CAL57613.1| FOG: TPR repeat (ISS) [Ostreococcus tauri]
          Length = 345

 Score = 38.9 bits (90), Expect = 0.80,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 42/129 (32%), Gaps = 18/129 (13%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++  +  KE N ++A  ++ +     P   VA   L   A      G++++A +  E  I
Sbjct: 226 DRGNVAFKEGNVAQAAVHYTEALDLDPSHVVA---LCNRAQCFLKLGEHEKALADAERAI 282

Query: 122 TQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
                    DY   ++  G++   + R            +    R +     +   K A 
Sbjct: 283 EV-----KSDYVKAHFRRGLALHALERFTD--------AVHAFERALALDPKNVQAKDAL 329

Query: 180 FYVTVGRNQ 188
                   +
Sbjct: 330 RVAEYAVVR 338


>gi|72547108|ref|XP_843178.1| hypothetical protein [Leishmania major strain Friedlin]
 gi|323363692|emb|CBZ12697.1| conserved hypothetical protein [Leishmania major strain Friedlin]
          Length = 622

 Score = 38.9 bits (90), Expect = 0.80,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 29/80 (36%), Gaps = 12/80 (15%)

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAE-----HAEEAMARLVEAYVALALMDEAREV 249
            IGR ++   EY AA   F    A Y   E        E++  L   Y  L  +DEA + 
Sbjct: 53  NIGRVFIDMKEYGAAENAFTEAAAIYEQVEGDKSLEYAESLELLALCYTHLKFLDEAEKA 112

Query: 250 ----VSLIQ---ERYPQGYW 262
               + + +     Y    W
Sbjct: 113 FKDSIRIFRDQCYNYGNNSW 132


>gi|282877698|ref|ZP_06286513.1| tetratricopeptide repeat protein [Prevotella buccalis ATCC 35310]
 gi|281300270|gb|EFA92624.1| tetratricopeptide repeat protein [Prevotella buccalis ATCC 35310]
          Length = 670

 Score = 38.9 bits (90), Expect = 0.81,   Method: Composition-based stats.
 Identities = 29/251 (11%), Positives = 74/251 (29%), Gaps = 67/251 (26%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYE-KAVLFLKEQNFSKAYEYFNQCSRDFPF 89
           AVC +   +   +       V         Y  KA ++L +++ ++A +  ++  +  P+
Sbjct: 145 AVCLMNEKKYDEALLQTDTIVQKWANAANAYSLKAEIYLHQKDTTQAAKSLDKSLKIDPY 204

Query: 90  --AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN------------------ 129
                  ++ +  A  ++     + + +     I   P   N                  
Sbjct: 205 DGNTWTTRAYISLARRKWKDADEELSRA-----IHLKPNVANNYVNRALARLNYNNLRGA 259

Query: 130 -VDY------------VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
             DY             +Y  G+   Q+  D           ++    +++    +    
Sbjct: 260 MADYDLALDLAPNDFLAHYNRGLLRMQLGDD--------NRAIEDFDFVIKMEPKN---- 307

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                V    N+    +        + G+  +AI  +  V+  + +       ++     
Sbjct: 308 -----VMAIFNRALLHD--------RTGDLHSAIRDYSAVIDQFPN---FWTGLSYRANC 351

Query: 237 YVALALMDEAR 247
           Y  L +  +A 
Sbjct: 352 YRRLGMTAKAE 362


>gi|158339139|ref|YP_001520316.1| TPR domain-containing protein [Acaryochloris marina MBIC11017]
 gi|158309380|gb|ABW30997.1| TPR domain protein [Acaryochloris marina MBIC11017]
          Length = 712

 Score = 38.9 bits (90), Expect = 0.81,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 73/240 (30%), Gaps = 64/240 (26%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ-----YSAGKYQQAASLG 117
           +A L++ + ++  A + ++   R  P            AF Q     +  G  Q A    
Sbjct: 499 RATLYMAQTDYQSAIQDYSAIIRLDPKNV--------LAFSQRGSTRFIQGDQQGALKDY 550

Query: 118 EEYITQYPESKNV-------------------DYVYYLVGMSY------AQMIRDVPYDQ 152
           ++ I   P++                      DY   ++           + I  +  DQ
Sbjct: 551 DQLIKLNPKNVEAYDRRAHVRRYSGNPQGALQDYR--MITKINPRNSRAYEQIASLSEDQ 608

Query: 153 RATKLMLQYMSRIVERYTN--SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
              +  +    ++     N  S Y                   +  G+ Y K+  YV AI
Sbjct: 609 NDLEGAIAAYGQLQTLKPNDTSVY-------------------MSRGQLYEKQKRYVEAI 649

Query: 211 PRFQLVLA--NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
             +  ++    +  +       AR  +A        + R+V  L Q++        ++E 
Sbjct: 650 ADYTKMIELQPFQTSWFIMRGSAR-EKAGQRAGAKADYRQVAKLYQQQGDSSSAKDWLER 708


>gi|156384208|ref|XP_001633223.1| predicted protein [Nematostella vectensis]
 gi|156220290|gb|EDO41160.1| predicted protein [Nematostella vectensis]
          Length = 287

 Score = 38.9 bits (90), Expect = 0.81,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 56/161 (34%), Gaps = 25/161 (15%)

Query: 70  EQNFSKAYEYFNQCSRDFP-FAGVARK--SLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
           +  + +A  +F +  R +   +    +  + L+     Y  GK+++A    +E +  Y +
Sbjct: 121 QGKYEEARGHFKEALRLYQKTSDDQGQGNAHLLIGKTHYQQGKFEEAIGHYKEALRLYQK 180

Query: 127 SKN---VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
           + +       + L+G ++ Q        Q   +    +    +  Y  +           
Sbjct: 181 TSDDQGQGEAHLLIGKTHDQ--------QGKYEEARGHFKEALRLYQKT--SDDQGQ--- 227

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
                     + IG+ +  +G+Y  AI  ++  L  Y    
Sbjct: 228 ------GEAHLLIGKTHYLQGKYEEAIGHYKEALRLYQKTS 262



 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 66/189 (34%), Gaps = 32/189 (16%)

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVAR---KSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
           +  + +A  ++ +  R +      +   K+ L         GKY++A    +E +  Y +
Sbjct: 41  QGKYEEAIGHYKEALRLYQRTSDDQGQGKAHLFIGNAHNLQGKYEEAIGHYKEALRLYQK 100

Query: 127 SKNVDY----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN-SPYVKGARFY 181
           + + D      + L+G ++          Q   +    +    +  Y   S        +
Sbjct: 101 TSD-DQGQGKAHLLIGKTHNL--------QGKYEEARGHFKEALRLYQKTSDDQGQGNAH 151

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE---EAMARLVEAYV 238
           +             IG+ + ++G++  AI  ++  L  Y      +   EA   + + + 
Sbjct: 152 LL------------IGKTHYQQGKFEEAIGHYKEALRLYQKTSDDQGQGEAHLLIGKTHD 199

Query: 239 ALALMDEAR 247
                +EAR
Sbjct: 200 QQGKYEEAR 208


>gi|115373495|ref|ZP_01460792.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
 gi|310825299|ref|YP_003957657.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|115369501|gb|EAU68439.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
 gi|309398371|gb|ADO75830.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1]
          Length = 273

 Score = 38.9 bits (90), Expect = 0.81,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 21/47 (44%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
            L  A   ++ G Y +A    + ++  YP+    D     +G +YAQ
Sbjct: 15  QLGFAGALHAEGDYYRAIGEYKRFLYLYPDEPRADEARLSIGRAYAQ 61


>gi|71282583|ref|YP_269859.1| TPR domain-containing protein [Colwellia psychrerythraea 34H]
 gi|71148323|gb|AAZ28796.1| TPR domain protein [Colwellia psychrerythraea 34H]
          Length = 690

 Score = 38.9 bits (90), Expect = 0.81,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 49/168 (29%), Gaps = 42/168 (25%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSV----TDVRYQREVYEK--------AVLFLK 69
             LT+ FS++    V +    S  V          +V    ++++         A    +
Sbjct: 387 MPLTLLFSLSSISPVSFAASDSETVKSSDASTSEPNVNSASQLWQDLWKTSDQQAQQHYQ 446

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
           ++N+ +A + F         +              Y AG Y+QA    +       +S N
Sbjct: 447 QENYQQAAKQFKV-------SQW-------QGSAHYKAGDYEQALQAFK-------QSDN 485

Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
                     S       +   Q+     +    + +E+       K 
Sbjct: 486 --------AQSLYNQGNSLAQLQK-VDEAIDAYKKALEKDPELNDAKD 524


>gi|67458813|ref|YP_246437.1| hypothetical protein RF_0421 [Rickettsia felis URRWXCal2]
 gi|67004346|gb|AAY61272.1| unknown [Rickettsia felis URRWXCal2]
          Length = 175

 Score = 38.9 bits (90), Expect = 0.81,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 35/90 (38%), Gaps = 10/90 (11%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
             Y   ++     + ++  F +A +Y++Q S +  F+   + +L       Y+  KY +A
Sbjct: 33  TSYPYALFNIGECYFQQGKFIEAIKYYSQISDNH-FSLY-QSALFNCGSSFYNLDKYAEA 90

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
             +  + I +          YY     Y +
Sbjct: 91  IEMYSK-IRKNSN-------YYQKAQYYLR 112



 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/132 (12%), Positives = 49/132 (37%), Gaps = 30/132 (22%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSR---DFPFAGVARKSLLMSAFVQYSAGKYQQAASLG- 117
            K   + + + + +A + +++  +    +P+      +L       +  GK+ +A     
Sbjct: 7   TKGNNYFRNEKYKEAIKAYSKIDKSSTSYPY------ALFNIGECYFQQGKFIEAIKYYS 60

Query: 118 ---EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
              + + + Y          +  G S+  + +            ++  S+I +   NS Y
Sbjct: 61  QISDNHFSLYQS------ALFNCGSSFYNLDKYA--------EAIEMYSKIRK---NSNY 103

Query: 175 VKGARFYVTVGR 186
            + A++Y+   +
Sbjct: 104 YQKAQYYLRECQ 115


>gi|322495316|emb|CBZ30620.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 617

 Score = 38.9 bits (90), Expect = 0.81,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 29/80 (36%), Gaps = 12/80 (15%)

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAE-----HAEEAMARLVEAYVALALMDEAREV 249
            IGR ++   EY AA   F    A Y   E        E++  L   Y  L  +DEA + 
Sbjct: 53  NIGRVFIDMKEYGAAENAFTEAAAIYEQVEGDKSLEYAESLELLALCYTHLKFLDEAEKA 112

Query: 250 ----VSLIQ---ERYPQGYW 262
               + + +     Y    W
Sbjct: 113 FKDSIRIFRDQCYNYGNNSW 132


>gi|114666436|ref|XP_001173715.1| PREDICTED: cell division cycle protein 27 isoform 2 [Pan
           troglodytes]
          Length = 821

 Score = 38.9 bits (90), Expect = 0.81,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 583 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 632

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178
           N    +Y +GM Y +  +     +   +  L    +          +      S      
Sbjct: 633 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 688

Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                V   +N L               +Y +A+   + +                + + 
Sbjct: 689 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 743

Query: 237 YVALALMDEA 246
           Y  L     A
Sbjct: 744 YKKLGQTHLA 753


>gi|53803527|ref|YP_114612.1| hypothetical protein MCA2191 [Methylococcus capsulatus str. Bath]
 gi|53757288|gb|AAU91579.1| hypothetical protein MCA2191 [Methylococcus capsulatus str. Bath]
          Length = 698

 Score = 38.9 bits (90), Expect = 0.81,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 32/77 (41%), Gaps = 1/77 (1%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
                E+ E A   + E+++  A   + +  +    A   R++  M    +   G+  +A
Sbjct: 150 KSPPAELQEAARRCMIEEDWPAAVALYTKLLQQ-TDASYHREAQEMVGVARERNGQSFRA 208

Query: 114 ASLGEEYITQYPESKNV 130
            S  E+Y+  YPE +  
Sbjct: 209 KSEYEKYLQLYPEGEGA 225


>gi|332884784|gb|EGK05040.1| hypothetical protein HMPREF9456_03193 [Dysgonomonas mossii DSM
           22836]
          Length = 280

 Score = 38.9 bits (90), Expect = 0.82,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 41/136 (30%), Gaps = 31/136 (22%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQ---------REVYEKAVLFLK 69
           + +  L+  F + V F +    Q + +V +DS T              + V+ KA     
Sbjct: 1   MKRVILSYIFFLFV-FAISSYAQDTTNVKVDSATVKPSATIADNKGGNKTVFNKANELYN 59

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVARK-------SLL--MSAFVQYSAGKYQQAASLGEEY 120
             +F KA +                +       + L        Y   +  +A    E  
Sbjct: 60  SGDFRKAIDLLE--------NEKNEQKKQGLESAELYYNLGNSYYRVNEIAKARLYYERA 111

Query: 121 ITQYPESK----NVDY 132
               P  +    N+DY
Sbjct: 112 HLLDPGDRDTKHNIDY 127


>gi|332707120|ref|ZP_08427178.1| glycosyltransferase [Lyngbya majuscula 3L]
 gi|332354145|gb|EGJ33627.1| glycosyltransferase [Lyngbya majuscula 3L]
          Length = 1933

 Score = 38.9 bits (90), Expect = 0.82,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 63/213 (29%), Gaps = 52/213 (24%)

Query: 60  VYEKAVLFLKEQNFSKAYEYF---------NQCSRDFPFAGVARKSLLMSAFVQYSAGK- 109
           +Y++AV    + N   A  YF               +P    A +     A   ++ G  
Sbjct: 690 LYQQAV----QNNPQDAKAYFYLGNLFTEEEAWEEAYPSYLKATQLQPNLAQAHHNLGDT 745

Query: 110 ------YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
                 +++A +     I   PE                  + D        +       
Sbjct: 746 LVKQQRWEEAVTAYRRAIEIQPEFSW-----------SYNNMGDALLKLERWQDAADVFR 794

Query: 164 RIVERYTNSPYV----KGARFYVTVGRNQL--AAKEVEIG-----RYY------LKRGEY 206
           + +E   + P+       A   +      +      +E+       YY       K G++
Sbjct: 795 KAIELKPDFPWSYQNLGDALQALEQWDEAIIAYRHGIEVKSDWPWSYYNLGQALAKTGQW 854

Query: 207 VAAIPRFQLVLANYSD----AEHAEEAMARLVE 235
           + AI  +Q  +    +      H  EA+AR+ E
Sbjct: 855 LDAIACYQKAIELDPNFAKAYSHLGEALARIGE 887


>gi|295881341|gb|AAY16582.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 20 [Homo sapiens]
          Length = 992

 Score = 38.9 bits (90), Expect = 0.82,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEXQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|254788153|ref|YP_003075582.1| tetratricopeptide repeat domain-containing protein [Teredinibacter
           turnerae T7901]
 gi|237686893|gb|ACR14157.1| tetratricopeptide repeat domain protein [Teredinibacter turnerae
           T7901]
          Length = 791

 Score = 38.9 bits (90), Expect = 0.82,   Method: Composition-based stats.
 Identities = 16/134 (11%), Positives = 42/134 (31%), Gaps = 16/134 (11%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y + +    + +   A        +    +  + +S+++       AG+  +A +     
Sbjct: 505 YIRGMAASGKGDNEGAIAAMENLQKL---SPDSMRSMVLLVDAYIKAGQRDEAETFLNRV 561

Query: 121 ITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           I   P S    Y  Y+L G  +              +  ++   + ++          A 
Sbjct: 562 IATDPNS----YTGYFLRGNLHLYF--------GEAEPAVRDYQQAIKNDPKKEGAYNAL 609

Query: 180 FYVTVGRNQLAAKE 193
             + +   ++A  E
Sbjct: 610 AKLNLRLGKVADAE 623


>gi|254510225|ref|ZP_05122292.1| TPR domain protein [Rhodobacteraceae bacterium KLH11]
 gi|221533936|gb|EEE36924.1| TPR domain protein [Rhodobacteraceae bacterium KLH11]
          Length = 202

 Score = 38.9 bits (90), Expect = 0.82,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 44/137 (32%), Gaps = 20/137 (14%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSA 107
           S +       + E+    L + +   A ++    +   P FA     ++        +  
Sbjct: 75  SQSGSASADLLLERGREALDDGDVEAALDHLTALTDHAPEFAEGWHVRAS-----AFFGV 129

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
            ++  AA+  E  +T  P +    Y   Y +G+ +              +   +  SR +
Sbjct: 130 ERFGMAAADLEHALTLNPNN----YEAIYGLGLIFE--------IVGKPEQAFEAYSRAL 177

Query: 167 ERYTNSPYVKGARFYVT 183
             + +   V  A   + 
Sbjct: 178 AIHPHHEEVTNAVNRLK 194


>gi|217076661|ref|YP_002334377.1| tetratricopeptide repeat domain protein [Thermosipho africanus
           TCF52B]
 gi|217036514|gb|ACJ75036.1| tetratricopeptide repeat domain protein [Thermosipho africanus
           TCF52B]
          Length = 491

 Score = 38.9 bits (90), Expect = 0.82,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 64/202 (31%), Gaps = 39/202 (19%)

Query: 60  VYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
            YE   +   ++++ +A E +      +  F+      LL      +  G+++ A    +
Sbjct: 106 YYELGNVLYLKKDYDEAIEIYMKAFELNKEFS----LPLLKIGDTYFENGQFKDAEIAYK 161

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
             +      + +  VY  +G+ Y ++ +         +   +     +       Y    
Sbjct: 162 SALKI----EKLPQVYLRLGVLYNELQK--------FEKAEKIFRDGLSV----EYKPEI 205

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
            + ++    +L                   A+   + +  NY         +  L +   
Sbjct: 206 AYNLSYTLIRLGKH--------------FQALQILKELANNYP-TPEVYNELGLLQK--- 247

Query: 239 ALALMDEAREVVSLIQERYPQG 260
            L L ++A E + L  E Y + 
Sbjct: 248 NLGLYEDAEENLKLAGEEYEEN 269


>gi|116252907|ref|YP_768745.1| TPR repeat-containing protein [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115257555|emb|CAK08652.1| conserved hypothetical TPR repeat receptor protein [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 1238

 Score = 38.9 bits (90), Expect = 0.82,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 29/86 (33%), Gaps = 6/86 (6%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
           G  +++  ++      D  +   +  +   +L+     +A +     S   P      +S
Sbjct: 495 GRMKEAKHEIDTAIALDPSFDIALLARGRYYLQTGERDRALQDLLAASTANPAHS---QS 551

Query: 97  LLMSAFVQYSAGK---YQQAASLGEE 119
            LM A   Y  G     QQA    + 
Sbjct: 552 QLMLAAAHYEKGDRIPSQQALDNADR 577


>gi|90961618|ref|YP_535534.1| hypothetical protein LSL_0641 [Lactobacillus salivarius UCC118]
 gi|90820812|gb|ABD99451.1| Hypothetical protein LSL_0641 [Lactobacillus salivarius UCC118]
          Length = 295

 Score = 38.9 bits (90), Expect = 0.82,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 26/71 (36%), Gaps = 12/71 (16%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQA 113
            E+Y +A    K ++++KA +   +            K    + +    V +    Y  A
Sbjct: 2   SELYFQAEEAYKNKDYTKARKLLEK--------EYLEKKTFRTNYFLFLVFFKIEDYIAA 53

Query: 114 ASLGEEYITQY 124
                EYI QY
Sbjct: 54  YETANEYIRQY 64


>gi|27365502|ref|NP_761030.1| tol-pal system protein YbgF [Vibrio vulnificus CMCP6]
 gi|320155884|ref|YP_004188263.1| hypothetical protein VVM_02032 [Vibrio vulnificus MO6-24/O]
 gi|27361650|gb|AAO10557.1| tol-pal system protein YbgF [Vibrio vulnificus CMCP6]
 gi|319931196|gb|ADV86060.1| TPR repeat containing exported protein/ Putative periplasmic
           protein contains a protein prenylyltransferase domain
           [Vibrio vulnificus MO6-24/O]
          Length = 260

 Score = 38.9 bits (90), Expect = 0.82,   Method: Composition-based stats.
 Identities = 16/127 (12%), Positives = 47/127 (37%), Gaps = 15/127 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            Q   D+   +R     +    +  + + +S +   + +++              G+ Y 
Sbjct: 147 YQNAVDLILKKRDYAGAIAAFKQFQKDFPDSNFAPNSHYWL--------------GQLYF 192

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + +   A   F  V+ +Y D+    +A+ +L +        ++A++      + +P   
Sbjct: 193 AQKQDKEAAKSFAAVV-SYKDSNKRADALVKLGDIAARNNNPEQAKKYYQQAIDEHPGSA 251

Query: 262 WARYVET 268
            A+  ++
Sbjct: 252 SAKVAKS 258



 Score = 36.2 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 40/128 (31%), Gaps = 23/128 (17%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               Y  A +  +++   +P+S      +Y +G  Y    +D        K   +  + +
Sbjct: 156 KKRDYAGAIAAFKQFQKDFPDSNFAPNSHYWLGQLYFAQKQD--------KEAAKSFAAV 207

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           V  Y +S     A   +                   +      A   +Q  +  +  +  
Sbjct: 208 VS-YKDSNKRADALVKLGDIA--------------ARNNNPEQAKKYYQQAIDEHPGSAS 252

Query: 226 AEEAMARL 233
           A+ A ++L
Sbjct: 253 AKVAKSKL 260



 Score = 35.5 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 3/71 (4%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           LK+ +Y  AI  F+    ++ D+  A  +   L + Y A     EA +  + +   Y   
Sbjct: 155 LKKRDYAGAIAAFKQFQKDFPDSNFAPNSHYWLGQLYFAQKQDKEAAKSFAAVVS-YKDS 213

Query: 261 YWARYVETLVK 271
              +  + LVK
Sbjct: 214 N--KRADALVK 222


>gi|67920836|ref|ZP_00514355.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
 gi|67856953|gb|EAM52193.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
          Length = 380

 Score = 38.9 bits (90), Expect = 0.82,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 50/168 (29%), Gaps = 21/168 (12%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARK 95
           G    + +        D       Y          + + A   +    +  P F     K
Sbjct: 107 GNHSAAVKYYQKALSLDSSNPNFYYALGDSLANVGDNNNAASAYYYAIQLNPKF----VK 162

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           S +    V      Y+ AA   +  I   P +                ++      Q+  
Sbjct: 163 SYIGLGVVLLRQEDYEGAAEAYKRVIALDPNNPEA-----------FAIMGSSLLQQKQL 211

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
              LQY+   V+R+      +     + +    L   ++E+G+ +LKR
Sbjct: 212 DQALQYLGNAVQRFP-----RDVDLRLLLATAYLQQGQLELGKEHLKR 254


>gi|323436017|ref|ZP_01049747.2| conserved hypothetical protein [Dokdonia donghaensis MED134]
 gi|321496332|gb|EAQ39719.2| conserved hypothetical protein [Dokdonia donghaensis MED134]
          Length = 845

 Score = 38.9 bits (90), Expect = 0.83,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 27/67 (40%)

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           K  EY  A  R + +L+   D +    A   L + Y ++    +A    + I  +YP   
Sbjct: 563 KFKEYPLAASRLEKLLSFKPDEKLVLPATYNLYQVYDSMGAFAKAETYKNEITTKYPDSR 622

Query: 262 WARYVET 268
           +A  +  
Sbjct: 623 YATRINN 629


>gi|241951018|ref|XP_002418231.1| small glutamine-rich tetratricopeptide repeat-containing protein,
           putative [Candida dubliniensis CD36]
 gi|223641570|emb|CAX43531.1| small glutamine-rich tetratricopeptide repeat-containing protein,
           putative [Candida dubliniensis CD36]
          Length = 344

 Score = 38.9 bits (90), Expect = 0.83,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 44/131 (33%), Gaps = 16/131 (12%)

Query: 35  LVGWERQSSRDVYLDSVTDVRY-----QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
            V     S +   + +V ++         E+  +    +  +++++A   + +     P 
Sbjct: 73  TVSSNSTSEKSESVPAVKEIDADTKAKADELKVQGNRAMALKDYTEAIAKYTEAISLDPT 132

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
             V    L   A    S+ K+ +A    E+ I   P        Y  +G++   +     
Sbjct: 133 NVV---YLSNRAAAHSSSQKHDKAVEDAEKAIKLNPNFSK---AYSRLGLAKYALG---- 182

Query: 150 YDQRATKLMLQ 160
            D +A     +
Sbjct: 183 -DAKAAMEAYK 192


>gi|196229622|ref|ZP_03128486.1| serine/threonine protein kinase [Chthoniobacter flavus Ellin428]
 gi|196225948|gb|EDY20454.1| serine/threonine protein kinase [Chthoniobacter flavus Ellin428]
          Length = 781

 Score = 38.9 bits (90), Expect = 0.83,   Method: Composition-based stats.
 Identities = 17/122 (13%), Positives = 41/122 (33%), Gaps = 10/122 (8%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
           FA+ +F  +    ++      +R +   S  + +    +    V  L     + A     
Sbjct: 372 FAMIVFVLLIGTGVL----LRNRILSGPSEEEAKKGSALVADGVDKLVGAKSTDAVTSLA 427

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES-KNVDYVYYLVGMS 140
             +   P       + +++   Q+ AG   +  +  +    + P S K+ D      G++
Sbjct: 428 ALAAQKPEQPWLNWADMLTGLAQFMAGNRPEGIAAFQRVEQRGPYSKKDAD-----KGLA 482

Query: 141 YA 142
             
Sbjct: 483 DF 484


>gi|157145618|ref|YP_001452937.1| tetratricopeptide repeat protein [Citrobacter koseri ATCC BAA-895]
 gi|157082823|gb|ABV12501.1| hypothetical protein CKO_01364 [Citrobacter koseri ATCC BAA-895]
          Length = 389

 Score = 38.9 bits (90), Expect = 0.83,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 68/189 (35%), Gaps = 30/189 (15%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              ++    + +A + FNQ + +  F   A +  L+  +   +   +Q+A  + E  +  
Sbjct: 114 GRDYMAAGLYDRAEDMFNQLTDETDFRVGALQ-QLLQIY--QATSDWQKAIDVAERLVKL 170

Query: 124 YPESKNVDYVYYLVGMSYAQMI-RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
             + + ++  ++   ++  QM   D+       K              NS          
Sbjct: 171 GKDKQRIEIAHFYCELALQQMGCDDMDRAMTLLKKGAAADK-------NS---------- 213

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
                  A   + +GR ++ +GEY  A+   Q V++   D E   E +  L   Y  L  
Sbjct: 214 -------ARVSIMMGRVFMAKGEYAKAVESLQRVIS--QDKELVSETLEMLQTCYQQLGK 264

Query: 243 MDEAREVVS 251
            DE  E + 
Sbjct: 265 NDEWAEFLR 273


>gi|148547360|ref|YP_001267462.1| cellulose synthase subunit BcsC [Pseudomonas putida F1]
 gi|148511418|gb|ABQ78278.1| cellulose synthase operon C domain protein [Pseudomonas putida F1]
          Length = 1172

 Score = 38.9 bits (90), Expect = 0.83,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 53/165 (32%), Gaps = 17/165 (10%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
               +A     +  + +P +   R++L    F +    +   A +L ++     P +++ 
Sbjct: 161 GQRPEAIRQLQRLDQQYPGSAGLRQTLTGWLFAEKRDRE---ALALLDQLARD-PGARDA 216

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
                      AQ   D    Q  +          ++RY  SP +  A   +   R  LA
Sbjct: 217 A----------AQREFDYLSGQAVSATSAAAWQAFLQRYPASPLLAQASETLQQQRKLLA 266

Query: 191 AKEVEI---GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
               +    G+  L +G    A  + +  L  Y        A+  
Sbjct: 267 DPAWQAGQRGKALLDKGRNAEAETQLRRALRQYPGDASLHGALGY 311


>gi|119489030|ref|ZP_01621965.1| TPR repeat protein [Lyngbya sp. PCC 8106]
 gi|119454986|gb|EAW36129.1| TPR repeat protein [Lyngbya sp. PCC 8106]
          Length = 155

 Score = 38.9 bits (90), Expect = 0.83,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 47/129 (36%), Gaps = 21/129 (16%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           +A ++L+  N  +A     Q   D P FA    R+++L      Y   +Y +A +  ++ 
Sbjct: 46  QAEVWLQGGNSREAEGVLTQLIEDLPDFAEAWNRRAVL-----YYITEQYDKALADCKQV 100

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           I   P         + +G+ YA M              ++   + +E      Y    + 
Sbjct: 101 IELNPIHFG---AIHGMGLCYAAM--------GDFSAAIRAFRQALEIQP---YSVENQR 146

Query: 181 YVTVGRNQL 189
            +    +QL
Sbjct: 147 LILECTSQL 155


>gi|119477999|ref|ZP_01618099.1| TPR domain protein [marine gamma proteobacterium HTCC2143]
 gi|119448912|gb|EAW30154.1| TPR domain protein [marine gamma proteobacterium HTCC2143]
          Length = 747

 Score = 38.9 bits (90), Expect = 0.83,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 44/105 (41%), Gaps = 12/105 (11%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y   +L+++ +N   A E   + +   P  +  +     + A   + +GK + A +  ++
Sbjct: 653 YAIGLLYIRLKNLGLATESLQKAASLAPDISHYS----YVYAVALFESGKREWAITSLKQ 708

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
            + ++P + ++     L  ++    +  +   + A +   Q + R
Sbjct: 709 TLNRHPGNPDI-----LSALASY--LNAMGRSEDAKRYADQLLER 746


>gi|111115034|ref|YP_709652.1| surface-located membrane protein 1 [Borrelia afzelii PKo]
 gi|110890308|gb|ABH01476.1| surface-located membrane protein 1 [Borrelia afzelii PKo]
          Length = 1013

 Score = 38.9 bits (90), Expect = 0.83,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 32/109 (29%), Gaps = 31/109 (28%)

Query: 69   KEQNFSKAYEYFNQ------CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
             ++N+ KA E F +          +             A          +A  L +EY  
Sbjct: 917  NQKNYQKAIEIFEKAIINSDIEAKY-----------NLATTLIEINDNTRAKDLLKEYTK 965

Query: 123  QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
              P +    Y     G+       +   DQ         +  +++++ N
Sbjct: 966  LKPNNPEALYAL---GIIEYNENNN---DQT--------LRELIKKFPN 1000



 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 3/62 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y KA + LK +N+  A   +N      P       + +  A     +G   QA S  E+
Sbjct: 842 LYLKASINLKNENYQNAIPLYNLVIEKNPEN---ISAYINLAKAYEKSGNKTQAISTLEK 898

Query: 120 YI 121
            I
Sbjct: 899 II 900


>gi|149174501|ref|ZP_01853127.1| hypothetical protein PM8797T_09519 [Planctomyces maris DSM 8797]
 gi|148846611|gb|EDL60948.1| hypothetical protein PM8797T_09519 [Planctomyces maris DSM 8797]
          Length = 399

 Score = 38.9 bits (90), Expect = 0.84,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 26/68 (38%), Gaps = 3/68 (4%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +  G  Y  + +Y AAI     +   + D   +  A+AR   +Y   A + EA   +   
Sbjct: 70  LLAGECYFVKKDYPAAIESLSQLNETFPDYRRSSFALAR---SYENTAKLAEAERTLKAH 126

Query: 254 QERYPQGY 261
              +P   
Sbjct: 127 LAAFPDSQ 134



 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 25/217 (11%), Positives = 55/217 (25%), Gaps = 36/217 (16%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            +A  FL E                  F     ++ L++    +    Y  A        
Sbjct: 37  SRAQRFLAEGKPDATLNELEWLRW---FEPDQPRAQLLAGECYFVKKDYPAAIESLS--- 90

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF- 180
                  +     Y    S   + R      +      + +   +  + +S         
Sbjct: 91  QLNETFPD-----YRR--SSFALARSYENTAKLA-EAERTLKAHLAAFPDSQEAVTQLQW 142

Query: 181 ------YVTVGRNQLAAKEVEIG-----RYY----LKRGEYVA--AIPRFQLVLANYSDA 223
                  +    N L  + +E       + Y     +    +A  +I     +       
Sbjct: 143 IYFNQIRLRELENLL-ERSLETCPNQFLQLYHLLNTEHKNPIAQESIKLLNRINEKEPGQ 201

Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
                A+A     +  L  +D+A+  +   ++  PQ 
Sbjct: 202 PSIMRALAY---CHWKLGEIDQAKSYLEAARQAEPQN 235


>gi|124004753|ref|ZP_01689597.1| tetratricopeptide repeat domain protein [Microscilla marina ATCC
           23134]
 gi|123989876|gb|EAY29405.1| tetratricopeptide repeat domain protein [Microscilla marina ATCC
           23134]
          Length = 283

 Score = 38.9 bits (90), Expect = 0.84,   Method: Composition-based stats.
 Identities = 16/138 (11%), Positives = 38/138 (27%), Gaps = 19/138 (13%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           KA    +++N+  A   +                 +  A   Y   K+  A     +Y  
Sbjct: 29  KAQKAFEDKNYLVAIHRYEHLVEQLQIND--PNVYINLAHAYYKTKKWLNAR----KYYV 82

Query: 123 QYPESKN---VDYVYYLVGMS---YAQMIRDVPYDQRATKLMLQYMSRIVERYTNS---P 173
              +++N       Y+ +GM           +       +  L+   + +++   +    
Sbjct: 83  LASKNENPTLSSLAYHQLGMISEENYNQDSSI----EDLRTALKLFKKAIKKNPKNLEAR 138

Query: 174 YVKGARFYVTVGRNQLAA 191
           Y             + A 
Sbjct: 139 YNYELLRKKLEALRKFAE 156


>gi|118384165|ref|XP_001025235.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89307002|gb|EAS04990.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 848

 Score = 38.9 bits (90), Expect = 0.84,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 39/132 (29%), Gaps = 25/132 (18%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            K    LK ++F +A EY+ +     P   A    ++L+          +Y +      +
Sbjct: 137 NKGNEALKSKDFKEAIEYYTKSIEYDPKLAASYCNRALV-----YLKLKEYDKVIKDCNK 191

Query: 120 YITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
            I   P      Y   Y+  G +     +                  I+E+   +     
Sbjct: 192 AIEIDPN-----YLKAYHRRGKARFAQDK--------VYEAYSDFKFIMEKDPENK---E 235

Query: 178 ARFYVTVGRNQL 189
               +   ++ L
Sbjct: 236 VNGDLKECQDLL 247


>gi|21226703|ref|NP_632625.1| hypothetical protein MM_0601 [Methanosarcina mazei Go1]
 gi|20904990|gb|AAM30297.1| conserved protein [Methanosarcina mazei Go1]
          Length = 1024

 Score = 38.9 bits (90), Expect = 0.84,   Method: Composition-based stats.
 Identities = 43/219 (19%), Positives = 71/219 (32%), Gaps = 43/219 (19%)

Query: 56  YQREVYEKAVLFLK-------EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           Y R  Y KA+  L        E+NF KA E F+      P   VA +         Y   
Sbjct: 5   YARAWYSKALALLNLKNPIGSEKNFEKALEAFDALLEINPKDTVAWQYRGNILR--YLDR 62

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
              +A    E+ +   P  +N+    Y  G++   +           +  L+    ++ER
Sbjct: 63  -PDEALEAFEKALAFDP--ENIP-ARYFKGLTLGYL--------NLPEKALEAFRGVIER 110

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEI--------------GRYYLKRGEYVAAIPRFQ 214
              +    GA +Y  +  NQL      +              G +Y  RG  +  + +  
Sbjct: 111 DPEN---AGALYYSGLALNQLGRHTEAVSALSEALKINPDNPGAWYY-RGVSLYILGKCM 166

Query: 215 LVLANYSDA----EHAEEAMARLVEAYVALALMDEAREV 249
             L  +            A     +AY++L    EA   
Sbjct: 167 EALEAFEKTLALEPSHAGAWEGKAKAYLSLGRRREALRA 205


>gi|304439484|ref|ZP_07399393.1| conserved hypothetical protein [Peptoniphilus duerdenii ATCC
           BAA-1640]
 gi|304372080|gb|EFM25677.1| conserved hypothetical protein [Peptoniphilus duerdenii ATCC
           BAA-1640]
          Length = 539

 Score = 38.6 bits (89), Expect = 0.85,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 39/95 (41%), Gaps = 10/95 (10%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSL---- 97
           +  + +V ++   + ++++    + + N+ +A + F +      +  F     K L    
Sbjct: 322 ETKVSNVKELIKSKNIFDEGNDSILKGNYLEAAKKFKKVSEKDEEH-FKEAQDKILDLER 380

Query: 98  --LMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
             L  A      GK ++A    E+++   P+S N 
Sbjct: 381 IFLDKAEALEDEGKVKEAIKTLEDFLAVVPDSANA 415


>gi|197122608|ref|YP_002134559.1| hypothetical protein AnaeK_2203 [Anaeromyxobacter sp. K]
 gi|196172457|gb|ACG73430.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp. K]
          Length = 243

 Score = 38.6 bits (89), Expect = 0.85,   Method: Composition-based stats.
 Identities = 7/30 (23%), Positives = 11/30 (36%)

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           A  + L      Y  G +  A +  E Y+ 
Sbjct: 119 ALLAELARGDAHYKLGDWDAALASYERYLK 148


>gi|124005062|ref|ZP_01689904.1| tetratricopeptide repeat family [Microscilla marina ATCC 23134]
 gi|123989314|gb|EAY28875.1| tetratricopeptide repeat family [Microscilla marina ATCC 23134]
          Length = 466

 Score = 38.6 bits (89), Expect = 0.85,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 62/175 (35%), Gaps = 29/175 (16%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y     +     + KA  ++ +  +       A  ++L  A+     G  +      ++
Sbjct: 137 LYNIGYTYQSMGFYDKAIAFYKKALK-HNLNNEA--AVLELAYCLDITGNLEDGLEYYKK 193

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY-TNSPYVKGA 178
           +I + P S      +Y +GM+YA++               +Y + I + +     Y++  
Sbjct: 194 FIDENPYSFL---AWYHLGMTYAKLGN-----MTDALNAYEYSTLIKDDFAPG--YIEIG 243

Query: 179 RFYVTVGRNQLAA--------KEVEIGRYYLK-------RGEYVAAIPRFQLVLA 218
             Y+T+ R   A          E      Y K       + EY AAI  ++  + 
Sbjct: 244 NIYITLSRYDEAQKAFETALLHETFSADLYCKLAYTFELKKEYYAAITHYKEAME 298


>gi|330509112|ref|YP_004385540.1| TPR-repeat-containing protein [Methanosaeta concilii GP-6]
 gi|328929920|gb|AEB69722.1| TPR-repeat protein [Methanosaeta concilii GP-6]
          Length = 598

 Score = 38.6 bits (89), Expect = 0.86,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 26/72 (36%), Gaps = 8/72 (11%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF-----VQYSAGKYQQAASL 116
            K     +   + +A   +++     P +    ++L+  A+        + GKY +A   
Sbjct: 494 AKGDALNQSGRYEEAAFAYDKVVEQNPDSS---QALIAHAYGSKGDALSAWGKYDEAVIA 550

Query: 117 GEEYITQYPESK 128
            +  I  YP   
Sbjct: 551 YDNAIENYPSEP 562


>gi|325926223|ref|ZP_08187581.1| putative xylanase/chitin deacetylase [Xanthomonas perforans 91-118]
 gi|325543405|gb|EGD14830.1| putative xylanase/chitin deacetylase [Xanthomonas perforans 91-118]
          Length = 883

 Score = 38.6 bits (89), Expect = 0.86,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 40/126 (31%), Gaps = 18/126 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           E+ +   KE+ ++ A E F +  +  P    A  +     FV Y  G++ ++A   E  +
Sbjct: 774 ERGLQLYKEKRYADAAEQFAEALKLRP--DFA-LAANNLGFVYYRQGRFAESARWLENTL 830

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPY--DQRATKLMLQYMSRIVERYTNSPYVKGAR 179
              P             ++Y  +        D+   +        +          + AR
Sbjct: 831 KIDPS----------RAVAYLNLGDAYAKAGDRDKARKAYATYLELQ---PQGSGAEQAR 877

Query: 180 FYVTVG 185
             +   
Sbjct: 878 AQLQSL 883


>gi|307634697|gb|ADI83237.2| lipoprotein, putative [Geobacter sulfurreducens KN400]
          Length = 696

 Score = 38.6 bits (89), Expect = 0.86,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 43/121 (35%), Gaps = 24/121 (19%)

Query: 132 YV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
           Y    Y   +  A+ + D    ++A           VER+   P+V          R +L
Sbjct: 489 YAPELYRRILHDAEQLGDPTLMEKAAG-------EFVERFPAHPWV----QRF---REEL 534

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           AA E         RG++   + R   +LA+        E++  L ++  A     +A   
Sbjct: 535 AAVE-------YNRGDFQRVVGRLSGMLAS-GTRPEYAESLYYLGKSLDASGNRRDAERA 586

Query: 250 V 250
           +
Sbjct: 587 M 587


>gi|238922452|ref|YP_002935965.1| hypothetical protein EUBREC_0026 [Eubacterium rectale ATCC 33656]
 gi|238874124|gb|ACR73831.1| Hypothetical protein EUBREC_0026 [Eubacterium rectale ATCC 33656]
          Length = 877

 Score = 38.6 bits (89), Expect = 0.86,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 54/175 (30%), Gaps = 39/175 (22%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+YEKA        +  A +           + + R  +   A V    G Y  A    +
Sbjct: 48  EIYEKAE------RYQDARDILLMAYDR---SPIGRMIIYRLAEVAIKMGDYDAATEYYD 98

Query: 119 EYITQYPESKNVDYVY-YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           E++   P   ++ YV  Y +              ++        +  I+E Y +  Y + 
Sbjct: 99  EFVEIAP-HDDMKYVLRYAI--------------KKGQGASFDELITILEEYKDEEYTEE 143

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
             + +                 Y K G+    I     ++  + D  + E A+  
Sbjct: 144 WAYELAYL--------------YHKAGKADKCIDACDELILWFGDGPYVERALEL 184


>gi|261416281|ref|YP_003249964.1| TPR repeat-containing protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|156072342|gb|ABU45493.1| TPR domain protein [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|261372737|gb|ACX75482.1| TPR repeat-containing protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302325833|gb|ADL25034.1| tetratricopeptide repeat protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 746

 Score = 38.6 bits (89), Expect = 0.86,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 67/214 (31%), Gaps = 37/214 (17%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ------QAA 114
           Y  A+     + F +A   F +    +P   +  ++        Y A  ++       A 
Sbjct: 339 YRAAMRLYLNRQFLEAAYAFGKVQTKYPAFHLVDQA------AFYKAKSFENLRMHKAAK 392

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
           S+ E+ I +YP+S             + Q++  + Y +      +     I +++  S  
Sbjct: 393 SVYEDAIKRYPQSD-------QRAKYHFQLMN-IDYKEGKYTEAMTKYQNIAQKFGESDV 444

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
              A +     +               ++G Y  ++     +L       +   A   + 
Sbjct: 445 KADADYVAGQIK--------------FEQGLYQESVDLLASIL---PGNANYFYARYTMG 487

Query: 235 EAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
            A   +   DEA      I E+       R ++ 
Sbjct: 488 IANSRMGKFDEAENCFRDITEQPVSNQSERDLQD 521


>gi|114666432|ref|XP_001173722.1| PREDICTED: cell division cycle protein 27 isoform 3 [Pan
           troglodytes]
          Length = 776

 Score = 38.6 bits (89), Expect = 0.86,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 538 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 587

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178
           N    +Y +GM Y +  +     +   +  L    +          +      S      
Sbjct: 588 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 643

Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                V   +N L               +Y +A+   + +                + + 
Sbjct: 644 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 698

Query: 237 YVALALMDEA 246
           Y  L     A
Sbjct: 699 YKKLGQTHLA 708


>gi|2407970|emb|CAA75047.1| TOM70 [Podospora anserina]
          Length = 614

 Score = 38.6 bits (89), Expect = 0.86,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 44/135 (32%), Gaps = 20/135 (14%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGV 92
           +G   ++  D       +       Y +A L   +  F+ A + + +      DF F+  
Sbjct: 378 LGAPDKAEEDFEAALAKNPEDPDIYYHRAQLHFIKGEFADAQKDYQKSIDLDPDFIFSH- 436

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
                +     QY  G    + +     I  +P+  +V Y YY           ++  DQ
Sbjct: 437 -----IQLGVTQYKLGSIASSMATFRRCIKNFPKIPDV-YNYY----------GELLLDQ 480

Query: 153 RATKLMLQYMSRIVE 167
                 ++     +E
Sbjct: 481 TKFSEAIEKFDTAIE 495


>gi|73965120|ref|XP_860053.1| PREDICTED: similar to Cell division cycle protein 27 homolog
           (CDC27Hs) (H-NUC) isoform 6 [Canis familiaris]
          Length = 778

 Score = 38.6 bits (89), Expect = 0.86,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 540 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 589

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178
           N    +Y +GM Y +  +     +   +  L    +          +      S      
Sbjct: 590 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 645

Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                V   +N L               +Y +A+   + +                + + 
Sbjct: 646 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 700

Query: 237 YVALALMDEA 246
           Y  L     A
Sbjct: 701 YKKLGQTHLA 710


>gi|325474400|gb|EGC77587.1| lipoprotein [Treponema denticola F0402]
          Length = 153

 Score = 38.6 bits (89), Expect = 0.86,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 39/102 (38%), Gaps = 7/102 (6%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            +  + A+  L       + +    ++T +    E+ ++A   L   +   A EY+    
Sbjct: 14  LLILTAAISLLFSCSSLPTDETVPANLTPI----ELNQRAQAELDNGSLRNALEYYKIVI 69

Query: 85  RDFPFAGVARK--SLLMSAFVQYSAGKYQQAASLGEEYITQY 124
           + +     + +  +    A +  S  K+ +A  + +  I +Y
Sbjct: 70  KRY-GTDASTRTAAEYEIAHIYISQKKWLEADDMLKNIIDRY 110


>gi|218462864|ref|ZP_03502955.1| TPR repeat-containing protein [Rhizobium etli Kim 5]
          Length = 848

 Score = 38.6 bits (89), Expect = 0.86,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 29/84 (34%), Gaps = 6/84 (7%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
            +++ R++      D  +   +  +   +L+     KA +     S   P      +S L
Sbjct: 85  MKEAKREIDTAIALDPSFDIALLARGRYYLQTGERDKALQDLLAASTANPAHS---QSQL 141

Query: 99  MSAFVQYSAGK---YQQAASLGEE 119
           M A   Y  G     QQA    + 
Sbjct: 142 MLAAAHYEKGDRIPSQQALDNADR 165


>gi|260824477|ref|XP_002607194.1| hypothetical protein BRAFLDRAFT_68009 [Branchiostoma floridae]
 gi|229292540|gb|EEN63204.1| hypothetical protein BRAFLDRAFT_68009 [Branchiostoma floridae]
          Length = 1218

 Score = 38.6 bits (89), Expect = 0.86,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 40/126 (31%), Gaps = 29/126 (23%)

Query: 61  YEKAVLFLKEQNFSKAYEYFN-QCS---------RDFPFAGVARKSLLMSAFVQYSAGKY 110
           Y  A+  L     + A   F              ++ P   +A  SL+      Y    Y
Sbjct: 615 YGLALQNL-TGQQTNAIRLFEQALEESRKQNAPAKEHP--QIAM-SLIKLGASYYRRANY 670

Query: 111 QQAASLGEE----YITQY---PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
            +A    EE    Y   +       ++     L+G+S+ +            +  L Y+ 
Sbjct: 671 IEAIKYIEEGLTMYRKIHDHDTAHSDIAEALNLLGLSFDKA--------GDHEKALDYLH 722

Query: 164 RIVERY 169
           + +E +
Sbjct: 723 QTLEMH 728


>gi|166154025|ref|YP_001654143.1| TPR repeat-containing protein [Chlamydia trachomatis 434/Bu]
 gi|166154900|ref|YP_001653155.1| TPR repeat-containing protein [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|301335225|ref|ZP_07223469.1| TPR repeat-containing protein [Chlamydia trachomatis L2tet1]
 gi|165930013|emb|CAP03496.1| tetratricopeptide repeat protein [Chlamydia trachomatis 434/Bu]
 gi|165930888|emb|CAP06450.1| tetratricopeptide repeat protein [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 335

 Score = 38.6 bits (89), Expect = 0.86,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 52/148 (35%), Gaps = 17/148 (11%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D    + +Y KAV+    ++   A +      +  P      K+ +   ++      + +
Sbjct: 141 DPWNPQGLYNKAVILSDMEDEEGAIDLLESTVKRNPL-YW--KAWVKLGYLLSRNKIWDR 197

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A    E  +   P   ++   +Y +G+ Y  + +        T+L L+     +    N+
Sbjct: 198 ATEAYERVVQLRP---DLSDGHYNLGLCYLTLDK--------TRLALKAFQESLLL--NA 244

Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYY 200
                A FY+ +    L   E     +Y
Sbjct: 245 EDA-DAHFYIGLAHMDLKQNEQAYDAFY 271


>gi|150007599|ref|YP_001302342.1| hypothetical protein BDI_0952 [Parabacteroides distasonis ATCC
           8503]
 gi|256839786|ref|ZP_05545295.1| BatE protein [Parabacteroides sp. D13]
 gi|149936023|gb|ABR42720.1| BatE, TRP domain containing protein [Parabacteroides distasonis
           ATCC 8503]
 gi|256738716|gb|EEU52041.1| BatE protein [Parabacteroides sp. D13]
          Length = 255

 Score = 38.6 bits (89), Expect = 0.86,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 33/106 (31%), Gaps = 19/106 (17%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            +FF + +C +     Q +                  ++A +   +++++KA E +    
Sbjct: 10  VLFFLLTLCLIGSAYAQDTAL----------------KEAEVAYTKEDYAKAIELYEGIL 53

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           +       A           Y AGK   A    E  +   P   + 
Sbjct: 54  KSN--GESAA-VYYNLGNTYYKAGKIAPAILNYERCLLLDPGDSDA 96


>gi|124003812|ref|ZP_01688660.1| TPR repeat protein [Microscilla marina ATCC 23134]
 gi|123990867|gb|EAY30334.1| TPR repeat protein [Microscilla marina ATCC 23134]
          Length = 236

 Score = 38.6 bits (89), Expect = 0.86,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 66/203 (32%), Gaps = 45/203 (22%)

Query: 62  EKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAF-----VQYSAGKYQQAAS 115
           EK   F++E NF +A  YFN    +          +   +AF       +S   Y  A  
Sbjct: 28  EKGRTFMQEGNFKEAVRYFNWAVEK---------DAQSYAAFNARGAAYFSLKDYDNALL 78

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
              + I       + DY  ++          +    +R T  +   ++   +    +  V
Sbjct: 79  DFNQSIKLN----DKDYKAFM----------NRGNVRRETNDLKGALADYTQALPLNNNV 124

Query: 176 KGARFYVTVGRNQLAAKEVEIGRY-------------YLKRGEYVAAIPRFQLVLANYSD 222
                   V   QL   +  +  +             Y  RG  +    +F+  +A++  
Sbjct: 125 PDLYLNRGVVNAQLQNYDAALKDFNEVIKRNKQNKNAYYNRGNILYTQKKFKEAIADFRT 184

Query: 223 AEHAEEAMARLVEAYVALALMDE 245
           A   +   AR  +A  AL + + 
Sbjct: 185 AVQLD---ARFAKALYALGMAEL 204


>gi|119486064|ref|ZP_01620126.1| hypothetical protein L8106_06070 [Lyngbya sp. PCC 8106]
 gi|119456839|gb|EAW37967.1| hypothetical protein L8106_06070 [Lyngbya sp. PCC 8106]
          Length = 407

 Score = 38.6 bits (89), Expect = 0.86,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 25/78 (32%), Gaps = 15/78 (19%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           G Y +A       I   P     D  YY  G++Y ++ + +       +   Q   ++  
Sbjct: 341 GDYTEA-------IRLNPG--YAD-AYYNRGLAYLEL-KKLDLAIADFQQAAQLYRQLGR 389

Query: 168 RYTNSPYVKGARFYVTVG 185
               + Y   A   +   
Sbjct: 390 ---EASYA-DAVQRIQEL 403


>gi|70988899|ref|XP_749301.1| mitochondrial outer membrane translocase receptor (TOM70), putative
           [Aspergillus fumigatus Af293]
 gi|66846932|gb|EAL87263.1| mitochondrial outer membrane translocase receptor (TOM70), putative
           [Aspergillus fumigatus Af293]
 gi|159128715|gb|EDP53829.1| mitochondrial outer membrane translocase receptor (TOM70), putative
           [Aspergillus fumigatus A1163]
          Length = 630

 Score = 38.6 bits (89), Expect = 0.86,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 47/141 (33%), Gaps = 20/141 (14%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGV 92
           +G +  ++ D  L    +       Y +A L      F++A + + +     R F F+  
Sbjct: 390 LGNKDAAADDFELAITHNKDDPDIYYHRAQLHFILGEFAEAAKDYQKSIDLDRTFIFSH- 448

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
                +     QY  G    A +     +  +   ++V  VY            ++  DQ
Sbjct: 449 -----IQLGVTQYKMGSVASAMATFRRSVKNF---EDVPDVY--------NYYGELLLDQ 492

Query: 153 RATKLMLQYMSRIVERYTNSP 173
           +     ++   + VE    S 
Sbjct: 493 QNFSEAIEKFDKAVEMEKQSK 513


>gi|255037563|ref|YP_003088184.1| hypothetical protein Dfer_3815 [Dyadobacter fermentans DSM 18053]
 gi|254950319|gb|ACT95019.1| Tetratricopeptide domain protein [Dyadobacter fermentans DSM 18053]
          Length = 233

 Score = 38.6 bits (89), Expect = 0.87,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 47/148 (31%), Gaps = 35/148 (23%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG----VARKSLLMSAFVQY 105
             TD       Y   V  LK+  + +A            F+     +  ++  +      
Sbjct: 103 KGTDASNLASFYA-GVALLKQGKYDEAISRLQS------FSSSDLLIHARAQSLIGDAYL 155

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDY--------VYYLVGMSYAQMIRDVPYDQRATKL 157
              +  +A S  +         K  DY        VY +  ++ AQ   + P D      
Sbjct: 156 EKNQAAEAISYYK---------KAADYEKNEYFTPVYLMK-LALAQEKANQPAD------ 199

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVG 185
            +    R+V+ +  S  V  A+ Y+ + 
Sbjct: 200 AVATYKRVVDEFPLSSEVVNAKKYMGLL 227


>gi|209527987|ref|ZP_03276470.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
 gi|209491584|gb|EDZ91956.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
          Length = 265

 Score = 38.6 bits (89), Expect = 0.87,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 72/222 (32%), Gaps = 64/222 (28%)

Query: 60  VYEKAVLFLKEQN-FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY-------SAGKYQ 111
            Y + V+  +  N  ++A   F Q  R  P                Y          +Y 
Sbjct: 79  YYNRGVVRFRIGNNLTEAIADFTQAIRINP----------EYVDAYYNRAIARVKVQQYW 128

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            A     + I+  P     D  +YL G+ Y++ ++D        +  +   +  +     
Sbjct: 129 PAIDDVTQVISLDPSH---DRAFYLRGLIYSENLKDY-------QTGINDFTEAIRLNPR 178

Query: 172 S--PYVKGARFYVTVGRNQLAAKEVEIGRY-------------YLKRGEYVAAIPRFQLV 216
           +  PY K           ++  +E  I  Y             Y  R     AI R+Q  
Sbjct: 179 NPAPYFKRGNARY-----RIGDRERAIDDYNKAIDINPSDPEPYYNR-----AISRYQ-- 226

Query: 217 LANYSDAEHAEEAMARLVEA---YVALALMDEAREVVSLIQE 255
           + +         A+  L ++   Y+ L   ++ ++ +  +++
Sbjct: 227 IGDRQG------AIFDLQKSADLYLDLGNFEKYQKAIDTLEK 262


>gi|197105306|ref|YP_002130683.1| hypothetical protein PHZ_c1843 [Phenylobacterium zucineum HLK1]
 gi|196478726|gb|ACG78254.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
          Length = 488

 Score = 38.6 bits (89), Expect = 0.87,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 58/179 (32%), Gaps = 41/179 (22%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           N   A   +++    +P A  AR      A   Y   +  +A  L +  + + P++    
Sbjct: 283 NPQVAITKYSETDASYP-ARYAR------AIAYYQLREPDRAIRLIDAMLQEQPDNP--- 332

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK-GARFYVTVGRNQLA 190
           Y++ L G    +  R        T+   +   R V    ++P ++      +    ++ A
Sbjct: 333 YLWELKGQILFEFAR--------TEEAEEPQRRSVALKPDAPLLRVNLGQTLIALPDK-A 383

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA--RLVEAYVALALMDEAR 247
             E  +      R                    +  + A+A   L EAY  L     AR
Sbjct: 384 KVEEGVAEL---RKA----------------LTQEEDNAVAWRLLAEAYDKLGQDGMAR 423


>gi|171693707|ref|XP_001911778.1| hypothetical protein [Podospora anserina S mat+]
 gi|170946802|emb|CAP73606.1| unnamed protein product [Podospora anserina S mat+]
          Length = 614

 Score = 38.6 bits (89), Expect = 0.87,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 44/135 (32%), Gaps = 20/135 (14%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGV 92
           +G   ++  D       +       Y +A L   +  F+ A + + +      DF F+  
Sbjct: 378 LGAPDKAEEDFEAALAKNPEDPDIYYHRAQLHFIKGEFADAQKDYQKSIDLDPDFIFSH- 436

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
                +     QY  G    + +     I  +P+  +V Y YY           ++  DQ
Sbjct: 437 -----IQLGVTQYKLGSIASSMATFRRCIKNFPKIPDV-YNYY----------GELLLDQ 480

Query: 153 RATKLMLQYMSRIVE 167
                 ++     +E
Sbjct: 481 TKFSEAIEKFDTAIE 495


>gi|162453226|ref|YP_001615593.1| hypothetical protein sce4950 [Sorangium cellulosum 'So ce 56']
 gi|161163808|emb|CAN95113.1| putative membrane protein [Sorangium cellulosum 'So ce 56']
          Length = 416

 Score = 38.6 bits (89), Expect = 0.87,   Method: Composition-based stats.
 Identities = 17/116 (14%), Positives = 32/116 (27%), Gaps = 21/116 (18%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +      +  + A   L      +  D+           + +Y           +  A +
Sbjct: 1   MKTSLCVVLMAFATTALAPSAASAEEDIEQ--------AKALYNAGAQAYAATRYRDAVQ 52

Query: 79  YFNQCSRDFPFAGVARKSLL-MSAFVQ---YSAGKYQQ----AASLGEEYITQYPE 126
            F    R  P     R +LL   A      Y   +  +    A +    Y+ Q P+
Sbjct: 53  SFEAAYRKAP-----RPALLFSLAQAYRRLYVVEQSPEALRAAIANYRRYLEQVPQ 103


>gi|148264105|ref|YP_001230811.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4]
 gi|146397605|gb|ABQ26238.1| Tetratricopeptide TPR_2 repeat protein [Geobacter uraniireducens
           Rf4]
          Length = 573

 Score = 38.6 bits (89), Expect = 0.87,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 76/208 (36%), Gaps = 35/208 (16%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           ++       +   Q+  Y  A  + + ++F +A E F +     P +     +L    F+
Sbjct: 305 KEFTEILGQEPDAQQVRYYLASTYEEMEDFDRAIEEFKKIP---PSSAHYFDALGHLGFL 361

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
               G+ ++  +L +E IT  P    ++    L G+   + +             L+ ++
Sbjct: 362 YKENGEPEKGIALLKEAITNQPN--RIELYLNLAGL--YESMDQFA-------EGLRVLT 410

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
            +   + N P +    F + V  +++  K+  I R      + +A               
Sbjct: 411 DVEGNFPNDPRL---SFRMGVLYDKMGNKDESIAR----MKKVIALA------------- 450

Query: 224 EHAEEAMARLVEAYVALALM-DEAREVV 250
            +  +A+  L   Y  L +  DEA + +
Sbjct: 451 PNDAQALNYLGYTYAELGVNLDEALQYL 478



 Score = 37.8 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 68/225 (30%), Gaps = 56/225 (24%)

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
            +A  Y+ +     P         L  A       +Y++A +  +  +   P+S  + Y 
Sbjct: 131 KEAIPYYKKALEIDPS---KEDIYLHLAIAYVKGFEYEEAVNTLKVLLKVNPDS-AIGY- 185

Query: 134 YYLV-----------GMSYAQMIRDVPYD--------------QRATKLMLQYMSRI--- 165
           YYL              +Y +   ++  D              Q      +   + +   
Sbjct: 186 YYLGKTYDQMKLSKDAANYYKKAVELKPDFEQAIIDLGISQEMQGLAGEAINTYNELLRI 245

Query: 166 -----------VERYTNSPYVKGARFYVTVGRNQ----LAAKEVE--IGRYYLKRGEYVA 208
                      V+ Y     +  A   +T+ +N     +  +E    IG  YL+   Y  
Sbjct: 246 NPVNYNVIQHLVQLYIQQKRLNDA---LTLLKNMADSGIGGQETHRKIGLIYLEMERYDD 302

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           AI  F  +L    DA+        L   Y  +   D A E    I
Sbjct: 303 AIKEFTEILGQEPDAQQVR---YYLASTYEEMEDFDRAIEEFKKI 344


>gi|116623520|ref|YP_825676.1| polysaccharide deacetylase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116226682|gb|ABJ85391.1| polysaccharide deacetylase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 899

 Score = 38.6 bits (89), Expect = 0.87,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 24/69 (34%), Gaps = 3/69 (4%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
               L+       +A  Y  +  +  P     +++    A V    G+  +A    EEY+
Sbjct: 824 NLGFLYFAMGRNDEAATYLEKTLQLDP---KRKEAHGNIAEVYLKMGRKPEAKQHYEEYL 880

Query: 122 TQYPESKNV 130
             YP S   
Sbjct: 881 RLYPASPKA 889



 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 44/136 (32%), Gaps = 27/136 (19%)

Query: 50  SVTDVRYQREVYE---KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM-SAFVQY 105
                R   + Y+   +A    + +   +A +   +  +  P   +    LL    F+ +
Sbjct: 775 PAPATRSVSKAYDLDRQARDLFRARKLDEALKKSQEAVKLKPNDPI----LLNNLGFLYF 830

Query: 106 SAGKYQQAASLGEEYITQYP----ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           + G+  +AA+  E+ +   P       N+  V YL           +           Q+
Sbjct: 831 AMGRNDEAATYLEKTLQLDPKRKEAHGNIAEV-YLK----------MGRKP----EAKQH 875

Query: 162 MSRIVERYTNSPYVKG 177
               +  Y  SP  + 
Sbjct: 876 YEEYLRLYPASPKAEE 891


>gi|196016514|ref|XP_002118109.1| hypothetical protein TRIADDRAFT_62131 [Trichoplax adhaerens]
 gi|190579322|gb|EDV19420.1| hypothetical protein TRIADDRAFT_62131 [Trichoplax adhaerens]
          Length = 1424

 Score = 38.6 bits (89), Expect = 0.88,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 73/224 (32%), Gaps = 48/224 (21%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQ-CSRD-----FPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
              + ++ + N+ +A   + +             + +A           Y  GK ++A +
Sbjct: 692 NIGLSYIDQGNYEEAISTYKKTLENQLSVLGHHHSDIAILYN-NLGKAYYRQGKREEAVT 750

Query: 116 LGEEY--ITQ----YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           + ++   I      +    +V   Y  +G++Y+   +                   +  +
Sbjct: 751 MFKKSLEIQLSVLGH-NHPDVASSYNNIGLAYSGQGKH---------------EEAIRMF 794

Query: 170 TNSPYVKGARFYVTVGRNQ--LAAKEVEIGRYYLKRGEYVAAIPRFQ-----LVLANYSD 222
             S  +K A      G N   LA   + IG  Y  + ++  AI  ++      +LA+  D
Sbjct: 795 QKSLKIKVA----VFGHNHLDLADTYMNIGITYYYQHKHQEAISMYEKSLSIQLLAHGHD 850

Query: 223 AEHAEEAMARLVEAYVALALMDEA--------REVVSLIQERYP 258
                     L   Y      +EA        +  +S++   +P
Sbjct: 851 HPDIATIYINLGNVYNDQGKYEEAISVFEKSLKMQMSVLDHNHP 894


>gi|81299019|ref|YP_399227.1| TPR repeat-containing protein [Synechococcus elongatus PCC 7942]
 gi|81167900|gb|ABB56240.1| TPR repeat [Synechococcus elongatus PCC 7942]
          Length = 923

 Score = 38.6 bits (89), Expect = 0.88,   Method: Composition-based stats.
 Identities = 14/117 (11%), Positives = 36/117 (30%), Gaps = 14/117 (11%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
               +  Y++A+   +   F  A    ++   D P    A  +L +     Y   + +  
Sbjct: 4   TAAAQHDYQQAIAAYQAGEFEAAIAQLDRLLGDVP--DWAA-ALGLQGLCYYCCDQKETG 60

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
            +L    I   P              ++   + ++   Q      L+ +++ +    
Sbjct: 61  ITLLRRAIALDPTDP-----------THFNNLGNLLQRQGHLTEALERLTQALAIDP 106


>gi|68846072|sp|P89105|CTR9_YEAST RecName: Full=RNA polymerase-associated protein CTR9; AltName:
           Full=Centromere-binding factor 1-dependent protein 1;
           AltName: Full=Cln three-requiring protein 9
 gi|1420046|emb|CAA99166.1| CTR9 [Saccharomyces cerevisiae]
          Length = 1077

 Score = 38.6 bits (89), Expect = 0.88,   Method: Composition-based stats.
 Identities = 21/156 (13%), Positives = 51/156 (32%), Gaps = 33/156 (21%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARK------------------------------SLL 98
            + ++ KA + + +  +  PF   A +                                L
Sbjct: 676 SKHSYLKAIQLYQKVLQVDPFNIFAAQGLAIIFAESKRLGPALEILRKVRDSLDNEDVQL 735

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI---RDVPYDQRAT 155
             A       +Y +A    E  + ++   K   ++  L+G ++         V + Q+A 
Sbjct: 736 NLAHCYLEMREYGKAIENYELVLKKFDNEKTRPHILNLLGRAWYARAIKETSVNFYQKAL 795

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
           +     +   V+  + S ++   +F + +   Q+A 
Sbjct: 796 ENAKTALDLFVKESSKSKFIHSVKFNIALLHFQIAE 831


>gi|296126637|ref|YP_003633889.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
 gi|296018453|gb|ADG71690.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
          Length = 804

 Score = 38.6 bits (89), Expect = 0.88,   Method: Composition-based stats.
 Identities = 23/199 (11%), Positives = 58/199 (29%), Gaps = 38/199 (19%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ-YSAGKYQ 111
           D      ++          +++KA  Y ++    +    +A        +   Y   K +
Sbjct: 5   DKSNIERLFNLGHEAFSNNDYNKAINYLDEIIDIYNKDIIAYSDGEFIIYSDSYDDNKNE 64

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
                 ++          +   YY   +S   +        +  +  ++   +++E   +
Sbjct: 65  DEERNIDD-EEINITHNTLVDAYYNRAISKFNL--------KNYEEAIKDFDKVIELSPD 115

Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE---- 227
                 A                     Y  RG   + + R++  + ++      +    
Sbjct: 116 ---KTDA---------------------YYNRGHSKSYLKRYEEGIEDFKKVLEFDEDDF 151

Query: 228 EAMARLVEAYVALALMDEA 246
           EA+  +   Y  LA  +EA
Sbjct: 152 EAVYYVGLGYFYLANYEEA 170



 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 63/213 (29%), Gaps = 51/213 (23%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           D    ++T        Y +A+     +N+ +A + F++     P                
Sbjct: 71  DDEEINITHNTLVDAYYNRAISKFNLKNYEEAIKDFDKVIELSP----------DKTDAY 120

Query: 105 YSAG-------KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
           Y+ G       +Y++     ++ +      ++     Y VG+ Y  +           + 
Sbjct: 121 YNRGHSKSYLKRYEEGIEDFKKVLEF---DEDDFEAVYYVGLGYFYL--------ANYEE 169

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
            ++                    Y+          E  I   Y  RG   + + R++  L
Sbjct: 170 AIKNF--------------DLALYLIEKTE-----EEYIADIYYYRGHSKSYLTRYEEAL 210

Query: 218 ANY----SDAEHAEEAMARLVEAYVALALMDEA 246
           +++       E   EA          L L +EA
Sbjct: 211 SDFNKLVQLREDDSEAFYFKALTEFYLGLYEEA 243


>gi|289619165|emb|CBI54433.1| unnamed protein product [Sordaria macrospora]
          Length = 466

 Score = 38.6 bits (89), Expect = 0.88,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 35/99 (35%), Gaps = 16/99 (16%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           +K +  L++ +++ A  + ++        +  +   LL  +     A   + A    E  
Sbjct: 8   QKGIDALEKGDYAAAISHLDKALE-----SSNSPAWLLARSKAHQKAKDLEAALHDAE-- 60

Query: 121 ITQYPESK--------NVDYVYYLVGMSYAQMIRDVPYD 151
           +  +  ++        ++    Y   + Y Q+ R    D
Sbjct: 61  LAYHVAAERGSGTSRSHMIQAQYRRAVIYYQLGRFADAD 99


>gi|225620848|ref|YP_002722106.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
 gi|225215668|gb|ACN84402.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
          Length = 798

 Score = 38.6 bits (89), Expect = 0.88,   Method: Composition-based stats.
 Identities = 24/201 (11%), Positives = 63/201 (31%), Gaps = 39/201 (19%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ-YSAGK 109
           + D +    +++        +++ KA +Y ++    +    +A        +   Y    
Sbjct: 1   MDDKKNIERLFDLGNDAFISKDYEKAIKYLDEVIDIYNRDIIAYSDSEFIIYSDSYDNED 60

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            ++  ++ +E I        +   YY  G+SY  +        +  +  ++   +++E  
Sbjct: 61  EEEGKNINDEDINN--THNILVDTYYNRGLSYFNL--------KNYEEAIKDFDKVIELS 110

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA----EH 225
                                         Y  RG   + + +++  + ++       E 
Sbjct: 111 PEKSNA------------------------YYNRGHSKSYLGKYEEGIKDFKKVLEFNED 146

Query: 226 AEEAMARLVEAYVALALMDEA 246
             EA+  +   Y  L    EA
Sbjct: 147 DAEAIYYIGLGYFYLGRYQEA 167



 Score = 35.5 bits (81), Expect = 7.6,   Method: Composition-based stats.
 Identities = 17/135 (12%), Positives = 44/135 (32%), Gaps = 17/135 (12%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           E+ ++  +  N+  A + F +       +  A       A    +  +Y+ A       I
Sbjct: 461 ERGLIHYRNSNYDLAIKDFKKVIELDNESVYAN---YHLALSYDALEEYETALKYYARVI 517

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              P + +    YY   ++  +M              ++   ++++       +  A F 
Sbjct: 518 ELDPNTPDS---YYNRALAEIEM--------ELYNEAIEDFYKVIDIDNT---IIDAYFN 563

Query: 182 VTVGRNQLAAKEVEI 196
           + +  + L   +  I
Sbjct: 564 IGICYDSLKEHQKAI 578


>gi|224369967|ref|YP_002604131.1| putative Zn-dependent metalloprotease (TPR repeat protein)
           [Desulfobacterium autotrophicum HRM2]
 gi|223692684|gb|ACN15967.1| putative Zn-dependent metalloprotease (TPR repeat protein)
           [Desulfobacterium autotrophicum HRM2]
          Length = 438

 Score = 38.6 bits (89), Expect = 0.88,   Method: Composition-based stats.
 Identities = 21/153 (13%), Positives = 51/153 (33%), Gaps = 22/153 (14%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSA 107
           SV   R   E  +    ++ ++ +  A   F +  +  P  +     ++  M        
Sbjct: 280 SVRADRAAIEALQAGDQYMAKKEYQTAETQFAKAIKLAPEDYTAHVMQAKCML-----ET 334

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            ++++AA+  +  +T YP+        Y+ G  +  + +             +   R   
Sbjct: 335 RRFERAATHADLAVTLYPDEPQ---AQYVAGFVHLNLNQFA--------RAFERFDRYAG 383

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
               +P   GA F+    + ++         +Y
Sbjct: 384 LLPGNP---GAIFFKGYCQEKM-EHVASAAEFY 412


>gi|149061046|gb|EDM11656.1| aspartate-beta-hydroxylase (predicted), isoform CRA_a [Rattus
           norvegicus]
 gi|149061047|gb|EDM11657.1| aspartate-beta-hydroxylase (predicted), isoform CRA_a [Rattus
           norvegicus]
          Length = 506

 Score = 38.6 bits (89), Expect = 0.88,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 25/80 (31%), Gaps = 17/80 (21%)

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
             +   +  +     +V RY  SP  +  +       + LA K         +R   V  
Sbjct: 100 RKRGKIEEAVSAFEELVRRYPQSPRARYGKA---QCEDDLAEK---------QRSNEV-- 145

Query: 210 IPRFQLVLANYSDAEHAEEA 229
               +  +  Y +A    +A
Sbjct: 146 ---LRRAIETYQEAASLPDA 162


>gi|25028865|ref|NP_738919.1| putative transcription regulator [Corynebacterium efficiens YS-314]
 gi|259507927|ref|ZP_05750827.1| LuxR family bacterial regulatory protein [Corynebacterium efficiens
           YS-314]
 gi|23494151|dbj|BAC19119.1| putative transcription regulator [Corynebacterium efficiens YS-314]
 gi|259164422|gb|EEW48976.1| LuxR family bacterial regulatory protein [Corynebacterium efficiens
           YS-314]
          Length = 895

 Score = 38.6 bits (89), Expect = 0.88,   Method: Composition-based stats.
 Identities = 10/70 (14%), Positives = 26/70 (37%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           + +  +  D    + + E+ +   +   + +A    +  +    ++  A + +L S    
Sbjct: 343 EAFAATEPDSPAVKALAERGLALGRSGRWMEAAHALSLATNRTAYSEEADRYMLESIDAL 402

Query: 105 YSAGKYQQAA 114
            SA    QA 
Sbjct: 403 ISASDLPQAR 412


>gi|332706898|ref|ZP_08426959.1| putative NTPase, NACHT family protein [Lyngbya majuscula 3L]
 gi|332354782|gb|EGJ34261.1| putative NTPase, NACHT family protein [Lyngbya majuscula 3L]
          Length = 1975

 Score = 38.6 bits (89), Expect = 0.89,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 24/58 (41%), Gaps = 1/58 (1%)

Query: 61   YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
            +  A+ +L+  N+ +A E  ++     P + +        A   Y   +Y++A    +
Sbjct: 995  FVTALSYLRPNNYDQAIEILDEI-NQQPNSPIKGYIAWAIATCYYKKEEYEKAIGFYQ 1051



 Score = 35.5 bits (81), Expect = 7.6,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 67/232 (28%), Gaps = 54/232 (23%)

Query: 40   RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
             Q SRD+Y             Y  A  +     + +A +Y  Q          A +  L 
Sbjct: 1610 HQQSRDLYQQLDKQKDVADSWYWLADCYRNWGKYQQAVDY--QLKTL------AIRQQLD 1661

Query: 100  ----SAFVQYSAG-------KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
                 A   Y  G       +Y+ A +  ++    Y +            +   + + + 
Sbjct: 1662 DQPRIALAYYQLGRIYESWGQYENAIASYQQSRELYDQ------------LDLQKNVANQ 1709

Query: 149  PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
                      L   S+ ++ Y  S               QL   E  I   Y K G    
Sbjct: 1710 WRWLGDCYQELGDYSKAIDYYQQS----------LNLHQQLGQNE-YIANRYRKIGN--- 1755

Query: 209  AIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL---MDEAREVVSLIQERY 257
                 Q +LA   +     EA+  L +   ++     + +A +  + +   Y
Sbjct: 1756 ----SQRLLAR--NTPDTTEALHLLNQGEQSIGQAIEISQANDYKANLAYNY 1801



 Score = 35.5 bits (81), Expect = 8.5,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 67/226 (29%), Gaps = 52/226 (23%)

Query: 64   AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM-----------SAFVQYSAGKYQQ 112
              ++     + +A  Y+ Q    +          L                   + +YQQ
Sbjct: 1114 GRIYQDWGKYDQAIPYYEQGRDLYQ--------QLDKQKDVANLWYWLGDCYRLSSEYQQ 1165

Query: 113  AAS-----LGEEYITQYPESK-NVDYVYYLVG------------MSYAQMIRDV--PYDQ 152
            A       L    I Q  + + +V   YY +G            + Y Q  RD+    DQ
Sbjct: 1166 AVDCQLKTLA---IRQQLDHQSDVALAYYQLGRIYQDWGKYDQTIIYYQKSRDLYQQLDQ 1222

Query: 153  -RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL------AAKEVEIGRYYLKRGE 205
             +       +++       N       +      R QL      A+   ++GR Y   G+
Sbjct: 1223 QKDVADSWYWLASCYRELGNYQQAVDCQLKTLAIRQQLDHQPKIASAYYQLGRIYQDWGK 1282

Query: 206  YVAAIPRFQLVLANYSDAEHAEEAM---ARLVEAYVALALMDEARE 248
            Y  AI  +Q     Y   +  ++       L   Y       EA +
Sbjct: 1283 YSDAIKSYQQSRELYQQLDLQKDVANQWYWLGNCYQESGNYQEAVD 1328



 Score = 35.1 bits (80), Expect = 9.4,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 70/234 (29%), Gaps = 46/234 (19%)

Query: 55   RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM-----------SAFV 103
            R     Y+   ++     +  A  Y+ Q    +          L             A  
Sbjct: 1425 RIANAYYQLGRIYRDWGKYEDAIAYYQQSRELYQ--------QLDLQKDVAHSWYWLAVC 1476

Query: 104  QYSAGKYQQAAS------LG------EEYITQ---YPESKNVDYVYYLVGMSYAQMIRDV 148
               + KYQQA                +++I     +  +   D+  Y   ++Y Q  RD+
Sbjct: 1477 YRLSSKYQQALDCEIKNLAICQQLDDQQWIALAYGHRGTIYKDWGKYSEAITYYQQSRDL 1536

Query: 149  PYDQRATKLMLQYMSRIVERYTN-SPY--VKGARFYVTVGRNQL------AAKEVEIGRY 199
                   +++    S +V+ Y +   Y      +      R QL      A     +GR 
Sbjct: 1537 YQQLGKEEIVATLWSGLVDCYRDWGKYQQALDCQLKTLAIRQQLDDQPRIALAYWSLGRI 1596

Query: 200  YLKRGEYVAAIPRFQLVLANYSDA---EHAEEAMARLVEAYVALALMDEAREVV 250
            Y   G+Y  AI   Q     Y      +   ++   L + Y       +A +  
Sbjct: 1597 YQNWGKYDQAIRYHQQSRDLYQQLDKQKDVADSWYWLADCYRNWGKYQQAVDYQ 1650


>gi|300709649|ref|YP_003735463.1| TPR repeat-containing protein [Halalkalicoccus jeotgali B3]
 gi|299123332|gb|ADJ13671.1| TPR repeat-containing protein [Halalkalicoccus jeotgali B3]
          Length = 245

 Score = 38.6 bits (89), Expect = 0.89,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 20/58 (34%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            K V   +   + +A   + +       +  A  +    A+  +  GK +QA    E 
Sbjct: 105 NKGVAHAELGEYDEAIGAYREALAIAERSEHAAVAETNLAYALWETGKTEQALEHAER 162


>gi|253995883|ref|YP_003047947.1| hypothetical protein Mmol_0510 [Methylotenera mobilis JLW8]
 gi|253982562|gb|ACT47420.1| Tetratricopeptide TPR_2 repeat protein [Methylotenera mobilis JLW8]
          Length = 330

 Score = 38.6 bits (89), Expect = 0.89,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 36/90 (40%), Gaps = 11/90 (12%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAG 108
             + +  + ++ K VL  ++    +A + F + +  FP         ++L   +     G
Sbjct: 57  AANPKNAQALFMKGVLLAEQGRRDEAIKSFTEVTERFPNLPEPYNNLAVL---YA--DQG 111

Query: 109 KYQQAASLGEEYITQYP----ESKNVDYVY 134
           ++ +A    E  I  +P      +N+  +Y
Sbjct: 112 QFDKARKALETAIKTHPSYATAHENLGDIY 141


>gi|166366085|ref|YP_001658358.1| methyl-accepting chemotaxis protein [Microcystis aeruginosa
           NIES-843]
 gi|166088458|dbj|BAG03166.1| methyl-accepting chemotaxis protein [Microcystis aeruginosa
           NIES-843]
          Length = 892

 Score = 38.6 bits (89), Expect = 0.89,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 35/100 (35%), Gaps = 9/100 (9%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
           +       ++Y KA     + N   A     +    +P    A   +L+   +     +Y
Sbjct: 1   MPSGTEYAKLYRKANTAYCQGNLEDAAVIVKEMISKYP--EDA-NVMLLQGHIHLGLQQY 57

Query: 111 QQAASLGEEYITQ---YPESKN-VDYVYYLVGMSYAQMIR 146
           + A    E+ +      P S + VDY     G+   + +R
Sbjct: 58  RLAEERYEKVLQLAKNSPTSSDLVDYAQ--RGLDQIRQLR 95


>gi|88602067|ref|YP_502245.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
 gi|88187529|gb|ABD40526.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
          Length = 519

 Score = 38.6 bits (89), Expect = 0.89,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 49/133 (36%), Gaps = 19/133 (14%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-KSLLMSAFVQYSAGKYQQAASLGEE 119
           + + VL  +   F +A E + +     P    A  ++LL       +  +  +A +L ++
Sbjct: 377 FNRGVLLHRAGRFLEAIESYQKVLNKNP----ADSRALLNKGRAHQALHETHKAITLFKQ 432

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            I  +PE+ +    ++ +G  Y  ++R            +    +++           A 
Sbjct: 433 VIHIHPENSD---AWFYLGQIYTNLVR--------LAEAIVCFDQVLRIDPRH---VKAM 478

Query: 180 FYVTVGRNQLAAK 192
            Y     N+L  K
Sbjct: 479 IYKAKILNELGKK 491


>gi|26989357|ref|NP_744782.1| cellulose synthase subunit BcsC [Pseudomonas putida KT2440]
 gi|24984215|gb|AAN68246.1|AE016458_11 cellulose synthase operon C protein, putative [Pseudomonas putida
           KT2440]
          Length = 1172

 Score = 38.6 bits (89), Expect = 0.89,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 40/120 (33%), Gaps = 14/120 (11%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
               +A     +  + +P +   R++L    F +    +   A +L ++     P +++ 
Sbjct: 161 GQRPEAIRQLQRLDQQYPGSAGLRQTLAGWLFAEKRDRE---ALALLDQLARD-PGARDA 216

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
                      AQ   D    Q  +          ++RY  SP +  A   +   R  LA
Sbjct: 217 A----------AQREFDYLSGQAVSATSAAAWQAFLQRYPASPLLAQASETLQQQRKLLA 266


>gi|154489946|ref|ZP_02030207.1| hypothetical protein PARMER_00175 [Parabacteroides merdae ATCC
           43184]
 gi|154089388|gb|EDN88432.1| hypothetical protein PARMER_00175 [Parabacteroides merdae ATCC
           43184]
          Length = 1197

 Score = 38.6 bits (89), Expect = 0.90,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 54/176 (30%), Gaps = 24/176 (13%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
                  A    EE   ++P+  ++   YY V   Y   +R          L   Y +++
Sbjct: 601 KLEDIPLATEAFEELERRFPKHSHLLESYYQV---YLMALRS-----GNQALAAAYKNKL 652

Query: 166 VERYTNSPYVKGAR--------FYVTVGRNQL--AAKEVEIGRYYLKRGEYVAAIPRFQL 215
           V  +  S Y               +   ++ +  A     +        + V     ++ 
Sbjct: 653 VTTFPESDYAVAIADPNYEYNIRMMDKVQDSIYQATYASYLA------EDTVTVRRNYRD 706

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           V A Y  A+   + M      YV     +  +  +  + E+YP          ++K
Sbjct: 707 VSAKYPLADLLPKFMFLEALTYVQAGDAEGFKNALKALVEKYPTADVTELAGEMLK 762


>gi|153810402|ref|ZP_01963070.1| hypothetical protein RUMOBE_00783 [Ruminococcus obeum ATCC 29174]
 gi|149833581|gb|EDM88662.1| hypothetical protein RUMOBE_00783 [Ruminococcus obeum ATCC 29174]
          Length = 169

 Score = 38.6 bits (89), Expect = 0.90,   Method: Composition-based stats.
 Identities = 10/74 (13%), Positives = 23/74 (31%), Gaps = 1/74 (1%)

Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQ-REVYEKAVLFLKEQNFSKAYE 78
           K    I F + V  +     +        +      Q +E Y++A   +    +  A +
Sbjct: 3  KKIIAVIAFVLVVTGVPFCAIKGDEAARARAKEAAESQNKEWYKEANACIDAGEYEDAIK 62

Query: 79 YFNQCSRDFPFAGV 92
             +   D+  +  
Sbjct: 63 LLEKLPTDYEDSRY 76


>gi|117926995|ref|YP_867612.1| sulfotransferase [Magnetococcus sp. MC-1]
 gi|117610751|gb|ABK46206.1| sulfotransferase [Magnetococcus sp. MC-1]
          Length = 637

 Score = 38.6 bits (89), Expect = 0.90,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 32/86 (37%), Gaps = 10/86 (11%)

Query: 64  AVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
            +  L++   ++A   F Q    +      A    +  A    ++G +    +L EE + 
Sbjct: 213 GLARLEDGRVNEAIAAFKQGLEAE----PHAAFIQINLANALRASGDFAATQALFEEGVA 268

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDV 148
            +PE       ++L G++      D 
Sbjct: 269 HHPEHP-----FFLTGLAQMVRQSDP 289


>gi|329894579|ref|ZP_08270385.1| hypothetical protein IMCC3088_743 [gamma proteobacterium IMCC3088]
 gi|328922933|gb|EGG30261.1| hypothetical protein IMCC3088_743 [gamma proteobacterium IMCC3088]
          Length = 127

 Score = 38.6 bits (89), Expect = 0.91,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 33/102 (32%), Gaps = 8/102 (7%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE-----VYEKAVLFLKEQNFSKAY 77
            L +F  +A C     ++  +R   L    +V+         + ++    L     + A 
Sbjct: 9   ILVLFTLLAACETPAPKQGDTRTPSLPQAVEVQRPLSPAYLRLLDEGQQQLNAGQIADAI 68

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
             F +  R         +  +  +     AG  + + ++ E 
Sbjct: 69  ATFERAQRIHADNA---RVYVALSQAYSKAGDRRASVAMAER 107


>gi|307321312|ref|ZP_07600712.1| FecR protein [Sinorhizobium meliloti AK83]
 gi|306893040|gb|EFN23826.1| FecR protein [Sinorhizobium meliloti AK83]
          Length = 1197

 Score = 38.6 bits (89), Expect = 0.91,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 27/93 (29%), Gaps = 3/93 (3%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
             ++ R++      D  +   +  +    ++      A E     S   P    +  + L
Sbjct: 492 MAEAKREIDAALSVDPSFDVALVARGRYHMQNGEADNAVEDLLAGSTANP--AYS-NAQL 548

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           + A   Y  G    AA   +      P    V 
Sbjct: 549 LLAAAHYEKGDRIPAAQALDNADRLDPNDPVVA 581



 Score = 35.9 bits (82), Expect = 5.6,   Method: Composition-based stats.
 Identities = 13/102 (12%), Positives = 28/102 (27%), Gaps = 16/102 (15%)

Query: 101 AFVQYS---AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
           A   Y        + A +  E  +   P S ++              +  V   +   + 
Sbjct: 412 ARAHYRYHIDNDLEGALADLERALKTAPGSSSI-----------WNSLGLVQGARGDNRA 460

Query: 158 MLQYMSRIVERYTNSP--YVKGARFYVTVGRNQLAAKEVEIG 197
                 + +      P  +   A  Y+   R   A +E++  
Sbjct: 461 AEAAFKQAIALDPLDPVAHANLAIQYMDEMRMAEAKREIDAA 502


>gi|189424131|ref|YP_001951308.1| lytic transglycosylase catalytic [Geobacter lovleyi SZ]
 gi|189420390|gb|ACD94788.1| Lytic transglycosylase catalytic [Geobacter lovleyi SZ]
          Length = 698

 Score = 38.6 bits (89), Expect = 0.91,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 50/142 (35%), Gaps = 13/142 (9%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
            G E+  +R + L S         + E A++       S A +   +  +DFP +G+  +
Sbjct: 316 GGSEKALARLLTLASEKGALADDALLEAALINKHNGRHSDASQILQRLIKDFPSSGLIPR 375

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL-VGMSYAQMIRDVPYDQRA 154
           +    A+ QY AG      +  E +   +   K+     Y    + +    +D    Q  
Sbjct: 376 AGWELAWGQYLAGNLP---AAAESFRLLF---KDT---LYRERALYWYARSQDR---QNR 423

Query: 155 TKLMLQYMSRIVERYTNSPYVK 176
                +   +++  Y    Y  
Sbjct: 424 PADAERAYKQLLGEYPYGFYAA 445



 Score = 36.6 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 40/109 (36%), Gaps = 17/109 (15%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              Q + R+++ + +S  +              A  E+  G+Y    G   AA   F+L+
Sbjct: 355 DASQILQRLIKDFPSSGLIPR------------AGWELAWGQY--LAGNLPAAAESFRLL 400

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
              + D  + E A+     +        +A      +   YP G++A +
Sbjct: 401 ---FKDTLYRERALYWYARSQDRQNRPADAERAYKQLLGEYPYGFYAAW 446


>gi|162451930|ref|YP_001614297.1| hypothetical protein sce3657 [Sorangium cellulosum 'So ce 56']
 gi|161162512|emb|CAN93817.1| hypothetical protein sce3657 [Sorangium cellulosum 'So ce 56']
          Length = 423

 Score = 38.6 bits (89), Expect = 0.91,   Method: Composition-based stats.
 Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 1/83 (1%)

Query: 190 AAKEVEIGRY-YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           A     +GR  + +R  Y  A   F + L        A+EA+ R++E   ++    EARE
Sbjct: 339 AKAAFHLGRMAFDQRRSYAEAERWFLVYLEEQPGGAFAQEALGRVIECRESMGPASEARE 398

Query: 249 VVSLIQERYPQGYWARYVETLVK 271
                  RYP G  A +   L++
Sbjct: 399 AARRYLARYPAGPHAAHARDLLE 421



 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 28/65 (43%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           + +++++A  +F     + P    A+++L      + S G   +A      Y+ +YP   
Sbjct: 352 QRRSYAEAERWFLVYLEEQPGGAFAQEALGRVIECRESMGPASEAREAARRYLARYPAGP 411

Query: 129 NVDYV 133
           +  + 
Sbjct: 412 HAAHA 416


>gi|145493914|ref|XP_001432952.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124400067|emb|CAK65555.1| unnamed protein product [Paramecium tetraurelia]
          Length = 306

 Score = 38.6 bits (89), Expect = 0.91,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 7/78 (8%)

Query: 66  LFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
             +K+Q + +A  Y N   +  P +    ++L + A+  Y    +  A  + E+ +  YP
Sbjct: 18  TLIKDQKYREAINYLNYELQFCPKS----RALSLLAYCHYMNQDFTSAVGIYEQLVKYYP 73

Query: 126 ESKNVDYVYYLVGMSYAQ 143
             +  DY  YL   SY +
Sbjct: 74  --EIDDYKIYL-AQSYYK 88


>gi|119497941|ref|XP_001265728.1| mitochondrial outer membrane translocase receptor (TOM70), putative
           [Neosartorya fischeri NRRL 181]
 gi|119413892|gb|EAW23831.1| mitochondrial outer membrane translocase receptor (TOM70), putative
           [Neosartorya fischeri NRRL 181]
          Length = 630

 Score = 38.6 bits (89), Expect = 0.91,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 47/141 (33%), Gaps = 20/141 (14%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGV 92
           +G +  ++ D  L    +       Y +A L      F++A + + +     R F F+  
Sbjct: 390 LGNKDAAADDFELAITHNKDDPDIYYHRAQLHFILGEFAEAAKDYQKSIDLDRTFIFSH- 448

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
                +     QY  G    A +     +  +   ++V  VY            ++  DQ
Sbjct: 449 -----IQLGVTQYKMGSVASAMATFRRSVKNF---EDVPDVY--------NYYGELLLDQ 492

Query: 153 RATKLMLQYMSRIVERYTNSP 173
           +     ++   + VE    S 
Sbjct: 493 QNFSEAIEKFDKAVEMEKQSK 513


>gi|121710870|ref|XP_001273051.1| mitochondrial outer membrane translocase receptor (TOM70), putative
           [Aspergillus clavatus NRRL 1]
 gi|119401201|gb|EAW11625.1| mitochondrial outer membrane translocase receptor (TOM70), putative
           [Aspergillus clavatus NRRL 1]
          Length = 630

 Score = 38.6 bits (89), Expect = 0.91,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 47/141 (33%), Gaps = 20/141 (14%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGV 92
           +G +  ++ D  L    +       Y +A L      F++A + + +     R F F+  
Sbjct: 390 LGNKDAAADDFELAITHNKDDPDIYYHRAQLHFILGEFAEAAKDYQKSIDLDRTFIFSH- 448

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
                +     QY  G    A +     +  +   ++V  VY            ++  DQ
Sbjct: 449 -----IQLGVTQYKMGSVASAMATFRRSVKNF---EDVPDVY--------NYYGELLLDQ 492

Query: 153 RATKLMLQYMSRIVERYTNSP 173
           +     ++   + VE    S 
Sbjct: 493 QNFSEAIEKFDKAVEMEKQSK 513


>gi|255013872|ref|ZP_05285998.1| hypothetical protein B2_08187 [Bacteroides sp. 2_1_7]
          Length = 255

 Score = 38.6 bits (89), Expect = 0.91,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 33/106 (31%), Gaps = 19/106 (17%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            +FF + +C +     Q +                  ++A +   +++++KA E +    
Sbjct: 10  VLFFLLTLCLIGSAYAQDTAL----------------KEAEVAYTKEDYAKAIELYEGIL 53

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           +       A           Y AGK   A    E  +   P   + 
Sbjct: 54  KSN--GESAA-VYYNLGNTYYKAGKIAPAILNYERCLLLDPGDSDA 96


>gi|170680722|ref|YP_001745805.1| cellulose synthase subunit BcsC [Escherichia coli SMS-3-5]
 gi|170518440|gb|ACB16618.1| cellulose synthase operon protein C, truncated [Escherichia coli
           SMS-3-5]
          Length = 1157

 Score = 38.6 bits (89), Expect = 0.91,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 75/237 (31%), Gaps = 38/237 (16%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  + +A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWGQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE-------------VEI 196
             Q         +  +V R   S  V      +     + A  E             + +
Sbjct: 557 RAQWN-----SNIQELVNRL-QSDQVLETANRLRE-NGKEAEAEAMLRQQPPSTRIDLTL 609

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
             +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 610 ADWAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 663



 Score = 36.2 bits (83), Expect = 5.2,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYV--AAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWGQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + ++ P      Y   L
Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537


>gi|114562641|ref|YP_750154.1| hypothetical protein Sfri_1464 [Shewanella frigidimarina NCIMB 400]
 gi|114333934|gb|ABI71316.1| conserved hypothetical protein [Shewanella frigidimarina NCIMB 400]
          Length = 245

 Score = 38.6 bits (89), Expect = 0.91,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 39/124 (31%), Gaps = 22/124 (17%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
              KY +A      +I+ YP+S       Y +G                     Q  S +
Sbjct: 135 KERKYDEAIPAFRSFISTYPDSNYAANANYWLGQLLYNKSEYND--------AKQAFSTV 186

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           V ++ +S     +   +      +A KE +             A   +  VL  Y+D+  
Sbjct: 187 VSKFADSNKRGDSLVKL----GMIAEKENDSA----------GARALYNKVLKEYADSAS 232

Query: 226 AEEA 229
           A  A
Sbjct: 233 ARLA 236



 Score = 35.5 bits (81), Expect = 7.4,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 31/91 (34%), Gaps = 6/91 (6%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREV-----YEKAVLF-LKEQNFSKAYEYFNQCSR 85
           +  L       +  V  D+ T       +     YE AV   LKE+ + +A   F     
Sbjct: 92  IANLTAKSSTPAAPVQADATTVAAASSTLGETGSYEAAVNLVLKERKYDEAIPAFRSFIS 151

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
            +P +  A  +      + Y+  +Y  A   
Sbjct: 152 TYPDSNYAANANYWLGQLLYNKSEYNDAKQA 182


>gi|52346058|ref|NP_001005076.1| RNA polymerase-associated protein CTR9 homolog [Xenopus (Silurana)
           tropicalis]
 gi|82235822|sp|Q6DEU9|CTR9_XENTR RecName: Full=RNA polymerase-associated protein CTR9 homolog;
           AltName: Full=SH2 domain-binding protein 1
 gi|49900213|gb|AAH76995.1| Ctr9, Paf1/RNA polymerase II complex component, homolog [Xenopus
           (Silurana) tropicalis]
          Length = 1172

 Score = 38.6 bits (89), Expect = 0.91,   Method: Composition-based stats.
 Identities = 43/276 (15%), Positives = 101/276 (36%), Gaps = 39/276 (14%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
           A L RA    E   +     ++T  +++A  +    E   S  +Y + + +     + Y 
Sbjct: 476 ASLDRAKAEAEHDEHYYNAISVTTTYNLARLYEGLCEFHESEKLYKNILREHPNYVDCYL 535

Query: 63  K-AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           +   +   + NF +A ++F +    ++D P    +    L  A       ++       E
Sbjct: 536 RLGAMARDKGNFYEASDWFKEALQINQDHP-DAWSLIGNLHLA-----KQEWGPGQKKFE 589

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ----RATKLMLQYMSRIVERYTNSPY 174
             + Q P ++N  Y    +G  + Q +     D+    R     L    +++   + + Y
Sbjct: 590 RILKQ-PSTQNDTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDSKNLY 648

Query: 175 VKGA-------RFYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVL 217
                      + YV   R+  A  +E         + +   Y+++ +Y++A+  ++  L
Sbjct: 649 AANGIGAVLAHKGYVREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCL 708

Query: 218 ANY---SDAEHAEEAMARLVEAYVALALMDEAREVV 250
             +    +     E +  L  A      + E ++++
Sbjct: 709 RKFYKHQNT----EVLLYLARALFKCGKLQECKQIL 740


>gi|24212980|ref|NP_710461.1| cAMP-binding protein [Leptospira interrogans serovar Lai str.
           56601]
 gi|45656142|ref|YP_000228.1| cyclic nucleotide binding protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|24193659|gb|AAN47479.1| cAMP-binding protein [Leptospira interrogans serovar Lai str.
           56601]
 gi|45599375|gb|AAS68865.1| cyclic nucleotide binding protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 405

 Score = 38.6 bits (89), Expect = 0.91,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 16/47 (34%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
                E+Y     +  ++N   A   F +  +  P    A ++ L  
Sbjct: 129 EEDPNELYNIGENYFNQKNNHHAAYAFQKYLQYLPNGPFATQAKLKL 175


>gi|45655977|ref|YP_000063.1| histidine kinase sensor protein [Leptospira interrogans serovar
            Copenhageni str. Fiocruz L1-130]
 gi|45599210|gb|AAS68700.1| histidine kinase sensor protein [Leptospira interrogans serovar
            Copenhageni str. Fiocruz L1-130]
          Length = 1068

 Score = 38.6 bits (89), Expect = 0.91,   Method: Composition-based stats.
 Identities = 21/173 (12%), Positives = 52/173 (30%), Gaps = 32/173 (18%)

Query: 36   VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
                   +R+ +L   T        Y  A    K+ N  +A +   +    +       K
Sbjct: 897  SSLNTDKTRNDFLKEETSDWSAS--YSHARQLYKDGNVKEAIDELAEL---YSKTPEDIK 951

Query: 96   SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL------------------V 137
             + + A + +    Y +A  +  +Y+    +S+  +Y YYL                   
Sbjct: 952  VIKLLALLSFKDKDYIKAVEVLGKYLEV--DSELSEYWYYLSIANKKLGKFSEAIYASEK 1009

Query: 138  GMS-------YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
             ++           + D+   Q       +  +++++    +   K     + 
Sbjct: 1010 VLAKQPDNTNNLVNLSDLYRLQNEYTRAKEIAAQVLDLDPQNENAKKILRKIE 1062


>gi|13542035|ref|NP_111723.1| TPR repeat-containing protein [Thermoplasma volcanium GSS1]
          Length = 510

 Score = 38.6 bits (89), Expect = 0.91,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 59/183 (32%), Gaps = 29/183 (15%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL-LMSAFVQYSAGKYQ 111
           D +   E  E+A   +   N+++A E  ++     P       SL L+ A   Y  G Y 
Sbjct: 4   DEKTPDEYAEEARSDIAAGNYAEAIEKIDKAIDKEPRNP----SLHLIRADALYRQGNYS 59

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            A             +  +   + L  + Y  M  D    +      ++      + Y  
Sbjct: 60  SAIEELNFTEHMDKNNPEL---FSLKSICYGSM-GDFKRSKEEADKAIKA----DQSYPF 111

Query: 172 SPYVKGARFYVTVGRNQLAAKEV---------------EIGRYYLKRGEYVAAIPRFQLV 216
           + Y + A        +  A K+                ++   Y ++ +Y  A+   + V
Sbjct: 112 AYYNRAAALRGLGDVDG-AEKDFRKYIEMQPSDPDPHYDLAEIYFEKKDYKKAMEEVKAV 170

Query: 217 LAN 219
           L N
Sbjct: 171 LRN 173


>gi|329851008|ref|ZP_08265765.1| tetratricopeptide repeat family protein [Asticcacaulis biprosthecum
           C19]
 gi|328839854|gb|EGF89426.1| tetratricopeptide repeat family protein [Asticcacaulis biprosthecum
           C19]
          Length = 804

 Score = 38.6 bits (89), Expect = 0.92,   Method: Composition-based stats.
 Identities = 13/108 (12%), Positives = 34/108 (31%), Gaps = 14/108 (12%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
                +     +A   F       P      K++    F      + ++A +  + Y+ Q
Sbjct: 188 GRTRQQNGKSDQAVRDFRMALGLSPGN---LKAVSDLIFTLTRLNRTEEAHTALDRYLRQ 244

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           +P            G+  ++   D+      T+  +   + ++  + N
Sbjct: 245 FPNEP---------GLLLSRA--DLLRRTGKTEEAIAAYNHLLPLHPN 281


>gi|225569426|ref|ZP_03778451.1| hypothetical protein CLOHYLEM_05510 [Clostridium hylemonae DSM
           15053]
 gi|225161634|gb|EEG74253.1| hypothetical protein CLOHYLEM_05510 [Clostridium hylemonae DSM
           15053]
          Length = 453

 Score = 38.6 bits (89), Expect = 0.92,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 28/92 (30%), Gaps = 10/92 (10%)

Query: 49  DSVTDVRYQ---REVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAF 102
           D +T   Y      +Y  +    +  N+  A     +       +   G    + L+ A 
Sbjct: 347 DEITGELYPKMCENLYSTSKNNFEVANYDTAISNLERVMQMDEGYSDGG----AKLLLAQ 402

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
                G   +A    ++ I  YP ++      
Sbjct: 403 SYEKKGDQDKANIEYQKIIEDYPNTEAAASAQ 434


>gi|193211913|ref|YP_001997866.1| hypothetical protein Cpar_0239 [Chlorobaculum parvum NCIB 8327]
 gi|193085390|gb|ACF10666.1| conserved hypothetical protein [Chlorobaculum parvum NCIB 8327]
          Length = 692

 Score = 38.6 bits (89), Expect = 0.92,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 41/97 (42%), Gaps = 13/97 (13%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           + F LT+ F+     L   ++Q S                +YE+A      +N+S+A +Y
Sbjct: 6   FSFRLTLLFAFFTLSLAACDQQESE----------PKPSALYEEAQRLEGRKNYSEALDY 55

Query: 80  FN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
           +N          F+  A ++L     +++  G+YQ A
Sbjct: 56  YNRGLAADTLKGFSAEALEALCRKGRIEFLTGRYQAA 92


>gi|148654219|ref|YP_001274424.1| hypothetical protein RoseRS_0031 [Roseiflexus sp. RS-1]
 gi|148566329|gb|ABQ88474.1| TPR repeat-containing protein [Roseiflexus sp. RS-1]
          Length = 522

 Score = 38.6 bits (89), Expect = 0.92,   Method: Composition-based stats.
 Identities = 46/229 (20%), Positives = 83/229 (36%), Gaps = 39/229 (17%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLK-----EQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
           D  L++   +  Q   Y  A + +      +    +AY+   +C++  P  G   +  L 
Sbjct: 280 DEALEAYAQIPPQDRYYVDARIRISAILKLQNKMREAYDTLFECAKLHPTNG---QLFLN 336

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
              + Y   K+  A    E  +   P        +YL+G  Y  M R+           L
Sbjct: 337 MGKLLYDMNKHAGAVKAFERAVQLLPNDPQ---AHYLLGFMYNLMGRE--------GWAL 385

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQ--LAAKEVE-IGRY--------------YLK 202
               + VE   ++  ++    Y+ V RN+  LAAKE   + ++              Y +
Sbjct: 386 AAWRKAVELAPDAHSLRYDLGYMYVRRNRYDLAAKEFARVLQFWPDDVETNFMLGLCYKE 445

Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
             E   AIP F+ VL       H  +A+  L  +Y+ +      +  + 
Sbjct: 446 LMEPARAIPLFEKVLRRNP--RHV-QALYYLGASYLQIGNTSLGKAYLR 491


>gi|86158329|ref|YP_465114.1| lytic transglycosylase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85774840|gb|ABC81677.1| Lytic transglycosylase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 750

 Score = 38.6 bits (89), Expect = 0.92,   Method: Composition-based stats.
 Identities = 23/171 (13%), Positives = 45/171 (26%), Gaps = 28/171 (16%)

Query: 27  FFSIAVCFLVGWERQSS----RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
            + +A    +  +R  +    R +  D          ++  A L  +     +A E    
Sbjct: 310 LYLLAGASSISGDRDEAVALYRQLARDFAGHAFADDALFFAADLLARNGKPQEAREALAA 369

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG----------EEYITQYPESKNVDY 132
             RD P      ++    A++   AG    A +            + Y     E     Y
Sbjct: 370 LVRDHPGGDYREEARFRLAWLLKQAGDLDGAVAQLLAVEEEQAGRDGY-----EHARAAY 424

Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
                     +        +   +      + +  RY    Y   AR  + 
Sbjct: 425 ---------WRARLLAARGEDGRRAAEAVFTDLASRYPTDYYGLLARARLD 466


>gi|227818845|ref|YP_002822816.1| adenylate class-3/4/guanylyl cyclase [Sinorhizobium fredii NGR234]
 gi|36959103|gb|AAQ87528.1| Putative adenylate cyclase 3 [Sinorhizobium fredii NGR234]
 gi|227337844|gb|ACP22063.1| probable adenylate class-3/4/guanylyl cyclase [Sinorhizobium fredii
           NGR234]
          Length = 769

 Score = 38.6 bits (89), Expect = 0.92,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 48/142 (33%), Gaps = 19/142 (13%)

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN--VDYVYYLVGMSYA----QM 144
             A  + L++       G+Y +A +  +  +   P   +  V     L    +A    Q 
Sbjct: 459 AYAISAQLLA-----QQGRYDEAFAAIDRAMKLAPNDPDNHVSMARVLNATGHAAEAEQQ 513

Query: 145 IRDVPY-DQRATKLMLQYMSRIVERYTNSPY--VKGARFYVTVGR-NQLAAKEVEIGRY- 199
           +R     D    K  L+ ++  V  ++   Y         V   + +  A     I  Y 
Sbjct: 514 VRLAMRIDPHPPKATLRMLA--VSLFSQGKYNEAADTLERVIEKKSDLQADYATLISSYG 571

Query: 200 YL-KRGEYVAAIPRFQLVLANY 220
           YL +     A I R+  +  ++
Sbjct: 572 YLGRTDGIQALINRYNKLATSF 593


>gi|307352488|ref|YP_003893539.1| tetratricopeptide repeat-containing protein [Methanoplanus
            petrolearius DSM 11571]
 gi|307155721|gb|ADN35101.1| Tetratricopeptide TPR_2 repeat protein [Methanoplanus petrolearius
            DSM 11571]
          Length = 1098

 Score = 38.6 bits (89), Expect = 0.93,   Method: Composition-based stats.
 Identities = 14/117 (11%), Positives = 34/117 (29%), Gaps = 23/117 (19%)

Query: 28   FSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE--------VYEKAVLFLKEQNFSKAYEY 79
            F+ A    V      S +    ++ D R   +        +Y+K V   +   +  + + 
Sbjct: 978  FTQAGTGSVSSPVMESSEYDSVNIPDTRTPTKEQLDDPDYLYKKGVALARRGYYRASLKC 1037

Query: 80   FNQCSRD------FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
            F++            F+           +     G + +A    +  +   P  +  
Sbjct: 1038 FSRIETLTEDCSDAVFSK-------GIIYA--KNGYFNEALDCFDRVLKMNPSHEKA 1085


>gi|294827566|ref|NP_710251.2| hypothetical protein LA_0070 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|293385409|gb|AAN47269.2| hypothetical protein LA_0070 [Leptospira interrogans serovar Lai
           str. 56601]
          Length = 987

 Score = 38.6 bits (89), Expect = 0.93,   Method: Composition-based stats.
 Identities = 21/173 (12%), Positives = 52/173 (30%), Gaps = 32/173 (18%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
                  +R+ +L   T        Y  A    K+ N  +A +   +    +       K
Sbjct: 816 SSLNTDKTRNDFLKEETSDWSAS--YSHARQLYKDGNVKEAIDELAEL---YSKTPEDIK 870

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL------------------V 137
            + + A + +    Y +A  +  +Y+    +S+  +Y YYL                   
Sbjct: 871 VIKLLALLSFKDKDYIKAVEVLGKYLEV--DSELSEYWYYLSIANKKLGKFSEAIYASEK 928

Query: 138 GMS-------YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
            ++           + D+   Q       +  +++++    +   K     + 
Sbjct: 929 VLAKQPDNTNNLVNLSDLYRLQNEYTRAKEIAAQVLDLDPQNENAKKILRKIE 981


>gi|281203477|gb|EFA77677.1| Protein phosphatase 5 [Polysphondylium pallidum PN500]
          Length = 556

 Score = 38.6 bits (89), Expect = 0.93,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 41/136 (30%), Gaps = 28/136 (20%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG-VARKSL 97
              S+ +    S        +++      L    +SKA EY        P A   + +S 
Sbjct: 52  STLSAEERLKKSDEYKAKANKLFGDQKFDLAVDEYSKAIEY-------HPTAILYSNRS- 103

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRAT 155
               F  +    +  A    ++     P      YV  YY +G +   +           
Sbjct: 104 ----FSYFKKELFVSALDDAKKATELDPM-----YVKGYYRLGSANMAL--------GHY 146

Query: 156 KLMLQYMSRIVERYTN 171
           +        +V+++ N
Sbjct: 147 QDAKINFQTVVKKFPN 162


>gi|262403350|ref|ZP_06079910.1| TPR domain protein in aerotolerance operon [Vibrio sp. RC586]
 gi|262350849|gb|EEY99982.1| TPR domain protein in aerotolerance operon [Vibrio sp. RC586]
          Length = 624

 Score = 38.6 bits (89), Expect = 0.93,   Method: Composition-based stats.
 Identities = 16/118 (13%), Positives = 37/118 (31%), Gaps = 7/118 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
             + A+     +        +  +S  +  D      ++ E Y +A     +  +  A  
Sbjct: 317 FRRGAIFSLLLVIGVGFPNQQAWASAWLNQDQQAMQAFKAEQYAQAAEKFSDPKWQGAAR 376

Query: 79  YFNQCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           Y+ +          ++ +          A     AG   +A  L E+ + Q P  ++ 
Sbjct: 377 YYAK-DYQGAVEAYSQIADPDLATQYNLANAYAQAGNLSKARELYEQVLEQEPNHQDA 433


>gi|311234485|gb|ADP87339.1| cell wall hydrolase/autolysin [Desulfovibrio vulgaris RCH1]
          Length = 568

 Score = 38.6 bits (89), Expect = 0.93,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 38/97 (39%), Gaps = 8/97 (8%)

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
              A + V + R  LA + +    +        AA+ R++ V   Y  +  A++A+    
Sbjct: 80  APAALYRVALTREGLARRSMNPADF-------KAAVDRYEEVARRYPRSALADDALFAAA 132

Query: 235 E-AYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
           +     L     AR+++      +P+G  A     ++
Sbjct: 133 KLCMERLDDASAARKILERQLREFPKGDMADAARAML 169


>gi|255531961|ref|YP_003092333.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366]
 gi|255344945|gb|ACU04271.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366]
          Length = 631

 Score = 38.6 bits (89), Expect = 0.93,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 42/138 (30%), Gaps = 44/138 (31%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K  L  F     CF++         +     + V+  +  ++KA  +L+  ++ +A  
Sbjct: 1   MKKVTLLFFL----CFIL--------QIARAQTSTVKKAQNSFDKAQEYLRNNDYDQAIP 48

Query: 79  YF-NQCSR----DFPFAGVA---------RKSLLMS-----------AFVQY-------S 106
                        F F  +A          ++ +             A   Y        
Sbjct: 49  LLQEAIKADPAFQFAFIQLADINRRQKLYEQAKINYTSAIALGGIPDARAYYGFAESQIY 108

Query: 107 AGKYQQAASLGEEYITQY 124
            G Y  A +  + +I QY
Sbjct: 109 TGDYANALNNIKLFIAQY 126


>gi|254445653|ref|ZP_05059129.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
           DG1235]
 gi|198259961|gb|EDY84269.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
           DG1235]
          Length = 900

 Score = 38.6 bits (89), Expect = 0.93,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 39/135 (28%), Gaps = 22/135 (16%)

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
            +  +E I++  E   +D   Y   +                       + +  R+  S 
Sbjct: 339 RATLDEMISRSVEHALLDQALYYRAVFKFLEGDFPG--------AEDDAAELQRRFPTST 390

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
           Y    R  +   +   A            R  Y  A  R Q + + +SD        A +
Sbjct: 391 Y----RRGMLALQASSA----------WNRERYRTAASRLQQMRSEFSDLRSDFRLSALI 436

Query: 234 VEAYVALALMDEARE 248
            + Y+   L    RE
Sbjct: 437 ADCYLRAGLRSSTRE 451



 Score = 35.1 bits (80), Expect = 9.7,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 30/77 (38%), Gaps = 3/77 (3%)

Query: 56  YQREVYEKAVLFLKEQN---FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
               ++E A+   +        +A +   + + D+P + +  ++ LM A +     K+  
Sbjct: 671 APVALFEAALNAEQRGQDTYLDEATKLLQRIASDYPDSDIVYRARLMQADLLRRLNKFGS 730

Query: 113 AASLGEEYITQYPESKN 129
           A  +       YP+  +
Sbjct: 731 AEQIYYRLEIDYPDRPD 747


>gi|153833361|ref|ZP_01986028.1| tetratricopeptide repeat family protein [Vibrio harveyi HY01]
 gi|148870370|gb|EDL69296.1| tetratricopeptide repeat family protein [Vibrio harveyi HY01]
          Length = 391

 Score = 38.6 bits (89), Expect = 0.93,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 52/191 (27%), Gaps = 44/191 (23%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY--- 120
           A  ++      +A + F Q   + P    +    L++ +      ++++A     +    
Sbjct: 114 AKDYMASGFLDRAEKIFEQLVEE-PDHRESALQQLVTIY--QQTREWEKAIHYANQLAKM 170

Query: 121 ------ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
                 I                   +   +  +      T   +Q+  + +        
Sbjct: 171 GKKRTRIRANIAH-------------FWCELAMLDQADGNTSKAIQHFKKALSEDPKCVR 217

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
              A                  GR YL+  +Y   I     VL    D +   + +  + 
Sbjct: 218 ASIAL-----------------GRVYLESEDYKHTIKYLTGVLE--QDKDFISDVLPTIA 258

Query: 235 EAYVALALMDE 245
           E Y  L   DE
Sbjct: 259 ECYHHLGQEDE 269


>gi|145490955|ref|XP_001431477.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124398582|emb|CAK64079.1| unnamed protein product [Paramecium tetraurelia]
          Length = 850

 Score = 38.6 bits (89), Expect = 0.93,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 3/46 (6%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
           S L  AF      +Y +A    ++ I       N+    YL G++Y
Sbjct: 61  SQLSKAFGLLKKQQYNEAMETLDKLIE---AHPNLADAQYLKGLAY 103


>gi|89052976|ref|YP_508427.1| tetratricopeptide TPR_2 [Jannaschia sp. CCS1]
 gi|88862525|gb|ABD53402.1| Tetratricopeptide TPR_2 [Jannaschia sp. CCS1]
          Length = 566

 Score = 38.6 bits (89), Expect = 0.93,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 46/153 (30%), Gaps = 28/153 (18%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR-------DFPFAGVARKSLLMSAFVQ 104
            D+   +  Y    +  +++ F  A E +             + F   AR      A   
Sbjct: 359 PDLASVQAAY--GDILRRDEQFEGAIEAYTAVLDLVDADQPRYWFIHYAR------AISY 410

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           +    +  A +     +   PE  N   V   +G S  +  R+           L  + R
Sbjct: 411 HQTDNWDPAEADFRRALELNPEQPN---VLNYLGYSLVEQRRNFD-------EALGMIQR 460

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
            V     S Y+  +  +V     +L   E  + 
Sbjct: 461 AVAARPESGYIIDSLGWVYY---RLGRFEEAVA 490


>gi|886951|emb|CAA88282.1| orf7 [Saccharomyces cerevisiae]
          Length = 1045

 Score = 38.6 bits (89), Expect = 0.93,   Method: Composition-based stats.
 Identities = 21/156 (13%), Positives = 51/156 (32%), Gaps = 33/156 (21%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARK------------------------------SLL 98
            + ++ KA + + +  +  PF   A +                                L
Sbjct: 676 SKHSYLKAIQLYQKVLQVDPFNIFAAQGLAIIFAESKRLGPALEILRKVRDSLDNEDVQL 735

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI---RDVPYDQRAT 155
             A       +Y +A    E  + ++   K   ++  L+G ++         V + Q+A 
Sbjct: 736 NLAHCYLEMREYGKAIENYELVLKKFDNEKTRPHILNLLGRAWYARAIKETSVNFYQKAL 795

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
           +     +   V+  + S ++   +F + +   Q+A 
Sbjct: 796 ENAKTALDLFVKESSKSKFIHSVKFNIALLHFQIAE 831


>gi|22297912|ref|NP_681159.1| putative glycosyltransferase [Thermosynechococcus elongatus BP-1]
 gi|22294090|dbj|BAC07921.1| tll0369 [Thermosynechococcus elongatus BP-1]
          Length = 365

 Score = 38.6 bits (89), Expect = 0.93,   Method: Composition-based stats.
 Identities = 24/176 (13%), Positives = 50/176 (28%), Gaps = 19/176 (10%)

Query: 2   SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY 61
             ++ R +      AY   K A      +A       +R     +  D++     Q   Y
Sbjct: 184 ERIMRRHLEQHPEDAYLWSKLA---GVYLARGNWEQAQRCLEEGLKTDTLPPAIAQELYY 240

Query: 62  EKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSL-LMSAFVQYSAGKYQQAASLGEE 119
           ++  L+ +   +  A   +        P   V   +  L  A  Q    ++  A +  + 
Sbjct: 241 QQGNLYAERGEWQAAIAAYEMALGT--PTPEVMHLATYLRLAEAQKQLKRWGHALATYDR 298

Query: 120 YITQYPESKNVDY----VYYLV------GMSYAQMIRDVPYDQRATKLMLQYMSRI 165
                P    + Y       L       G++  +    +  DQ       +    +
Sbjct: 299 LQRLDPT-CALAYQNQGALLLRLGQVSAGLAKLRQAIALLRDQNPA-EAQRLTQEL 352


>gi|110636430|ref|YP_676637.1| TPR repeat-containing protein [Cytophaga hutchinsonii ATCC 33406]
 gi|110279111|gb|ABG57297.1| TPR repeat containing protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 466

 Score = 38.6 bits (89), Expect = 0.93,   Method: Composition-based stats.
 Identities = 26/227 (11%), Positives = 75/227 (33%), Gaps = 43/227 (18%)

Query: 46  VYLDSVTDVRYQREVYE---------KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
              +   ++  + ++Y+         +A +  ++ +F  A E   +       A    + 
Sbjct: 80  TQFEEALEILDRAQLYQPNDTDIQLLRANIMAQQDDFEGAIELLEEILTL---AEEKDEI 136

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
                 +    G ++++ +  +E I    + ++  Y      +SY+  + D        +
Sbjct: 137 HYHMGVIYQDMGNFEESINHLKEAIMLNSQHEDAIYE-----LSYSLEVLD------RLE 185

Query: 157 LMLQYMSRIVERYTNSPYVK-----------------GARFYVTVGRNQLAAKEVEIGRY 199
             + +  +++E+   S +                    A  +V    ++ ++    IG  
Sbjct: 186 ESIDFFKQLIEKDPYSHFAWFCLGVSYFKQGKLDEALDAYEFVIAINDKYSSAYYNIGEC 245

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
           Y+ + EY  A+   +         +   +    +   Y  L +  +A
Sbjct: 246 YVYKNEYEKAL---EYFFQTMDMEDKTADVFYNIGFCYEHLGMHPKA 289


>gi|311068734|ref|YP_003973657.1| putative nucleic acid binding enzyme [Bacillus atrophaeus 1942]
 gi|310869251|gb|ADP32726.1| putative nucleic acid binding enzyme [Bacillus atrophaeus 1942]
          Length = 413

 Score = 38.6 bits (89), Expect = 0.94,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 3/91 (3%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
           V  L+      S+ + + S ++   Q E Y  A  F+  +  S A +         PF  
Sbjct: 263 VLSLISLYIHLSKKILIPSGSEAE-QHETYAMAKWFMAHKEISLAIKQLESIQHQ-PF-E 319

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
              ++L   + +     + Q+AASL E  + 
Sbjct: 320 HTDRALYDLSMLYKKQDRLQEAASLWERLMR 350


>gi|310800154|gb|EFQ35047.1| import receptor [Glomerella graminicola M1.001]
          Length = 624

 Score = 38.6 bits (89), Expect = 0.94,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 51/157 (32%), Gaps = 22/157 (14%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGV 92
           +G   +++ D       +       Y +A L   +  FS A + + +     RDF F+  
Sbjct: 387 LGAPEKAAEDFEKAMEHNSEDPDIYYHRAQLHFIKGEFSDAAKDYQKSIDLDRDFIFSH- 445

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
                +     QY  G    + S     I  + E  +V Y YY           ++  DQ
Sbjct: 446 -----IQLGVTQYKMGSIASSMSTFRRCIKNFKEVPDV-YNYY----------GELLLDQ 489

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
              +  ++     ++    S     A   + +    L
Sbjct: 490 GNFQEAIEKFDSAIDM--ESKTKPMAMNVLPLINKAL 524


>gi|322420030|ref|YP_004199253.1| TPR repeat-containing protein [Geobacter sp. M18]
 gi|320126417|gb|ADW13977.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacter sp.
           M18]
          Length = 572

 Score = 38.6 bits (89), Expect = 0.94,   Method: Composition-based stats.
 Identities = 33/236 (13%), Positives = 69/236 (29%), Gaps = 43/236 (18%)

Query: 23  ALTIFFSIAVCFLVGWERQSS-----RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
            L +   I+ C        S            +         ++ +A L   E +   A 
Sbjct: 8   LLFLPLMISACATEQASVPSPLADLGVITAPTAPPGAGRNMSLFAQARLRAAEGDQEGAL 67

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
               Q     P +     +   +A +     + ++A +  +  I   P            
Sbjct: 68  LLLRQAMAADPSSAFLHNA---AAQIYLQQNRPEEALAECQAAIAIDPS----------- 113

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
            +S   +  ++    +  K  +Q+  +++E       V                  + I 
Sbjct: 114 ALSSELLCGNILMTLQREKEAMQHYKKVIELDPTKEEVY-----------------LHIA 156

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM--ARLVEAYVALALMDEAREVVS 251
            YYLK  EY  A+   + ++    ++     A+    L + Y  + L  EA     
Sbjct: 157 IYYLKSFEYEQAVDTLKSLVKASPES-----ALGYYYLAKTYEQMRLPREALTYYK 207



 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 47/234 (20%), Positives = 78/234 (33%), Gaps = 47/234 (20%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
             + +  Q   +A +++ +     P      +  L  A     + +Y+QA    +  +  
Sbjct: 122 GNILMTLQREKEAMQHYKKVIELDPT---KEEVYLHIAIYYLKSFEYEQAVDTLKSLVKA 178

Query: 124 YPESKNVDYVYYLV-----------GMSYAQMIRDVPYD--------------QRATKLM 158
            PES  + Y YYL             ++Y +   D+  D              Q      
Sbjct: 179 SPES-ALGY-YYLAKTYEQMRLPREALTYYKKAVDLKPDFEQALIEMGISQETQGLIPDA 236

Query: 159 LQYMSRIVERYTNSPYVKG--ARFYVTVGR--NQLA------AKEVE----IGRYYLKRG 204
           +     ++E   N+  V    A+ Y+   R    LA       K +E    IG  +L+  
Sbjct: 237 IDSYKDLLEINPNNANVIQHLAQLYIQQKRLDEALALLQQKGGKSLETSRKIGLLFLELE 296

Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
            Y  AI  FQ +L    DA+        L  AY     +D+A      I    P
Sbjct: 297 RYDEAIKTFQDILKVEPDAQQVR---FYLASAYEEKEDVDQAIVEFRKISRESP 347


>gi|296125217|ref|YP_003632469.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
 gi|296017033|gb|ADG70270.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
          Length = 356

 Score = 38.6 bits (89), Expect = 0.94,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 41/113 (36%), Gaps = 14/113 (12%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D  Y +  Y + V  +  + + +A   F +     P       +    A+V+     Y++
Sbjct: 237 DNNYSKSYYNRGVSKVNLKLYDEAVNDFYKVIELEPQNF---NAYFRLAYVKLKLKMYEE 293

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
           A    ++YI     S   D VY+  G +  ++           K  ++   ++
Sbjct: 294 AIEYYDKYIDCNNVS---DDVYFNRGFAKYKLSD--------YKNAVKDFDKV 335



 Score = 35.5 bits (81), Expect = 7.7,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 59/170 (34%), Gaps = 24/170 (14%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
           +G    + +D       D  Y +  Y   +     + + ++ EYFN+       +     
Sbjct: 152 LGLYEDAIKDFNKVLELDKNYFKAYYNIGLSKYNLKMYDESIEYFNKALELDNNSAYTYN 211

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQ---YPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
                  V++  GKY++A    ++ +     Y +S      YY  G+S   +        
Sbjct: 212 ---NIGIVKHDLGKYKEALEYFDKALELDNNYSKS------YYNRGVSKVNL-------- 254

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
           +     +    +++E    +     A F +   + +L   E  I  YY K
Sbjct: 255 KLYDEAVNDFYKVIELEPQN---FNAYFRLAYVKLKLKMYEEAI-EYYDK 300


>gi|239815180|ref|YP_002944090.1| hypothetical protein Vapar_2189 [Variovorax paradoxus S110]
 gi|239801757|gb|ACS18824.1| conserved hypothetical protein [Variovorax paradoxus S110]
          Length = 230

 Score = 38.6 bits (89), Expect = 0.94,   Method: Composition-based stats.
 Identities = 7/61 (11%), Positives = 21/61 (34%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
              +Y++     +  +  +           F     A+++ L++A   Y  G  + + + 
Sbjct: 55  AAALYDEVERSTQSGDVERIQRVLGDMKERFAGTAYAQQAGLLAAKALYEKGNAEASRAA 114

Query: 117 G 117
            
Sbjct: 115 L 115


>gi|218249734|ref|YP_002374735.1| tetratricopeptide repeat domain protein [Borrelia burgdorferi ZS7]
 gi|218164922|gb|ACK74983.1| tetratricopeptide repeat domain protein [Borrelia burgdorferi ZS7]
          Length = 1004

 Score = 38.6 bits (89), Expect = 0.94,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 44/220 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLG 117
           +  ++     NF ++ EY N       F   A+K    ++   +  ++   K +++    
Sbjct: 773 KAGIVSNNLGNFKQSEEYLNF------FNANAKKPNEIAIYNLSIAKFENNKLEESLETI 826

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYV 175
            + I   P  +  +Y  YL      +            +  +   S ++E+     S Y+
Sbjct: 827 NKAIDLNP--EKSEY-LYLKASINLKK--------ENYQNAISLYSLVIEKNPENTSAYI 875

Query: 176 KGARFYVTVGRNQLAAKEVE-------------IGRYYLKRGEYVAAIPRFQLVLANYSD 222
             A+ Y   G    A   +E             +G  Y K   Y  AI  F+  + N   
Sbjct: 876 NLAKAYEKSGNKSQAISTLEKIINKNNKLALNNLGILYKKEKNYQKAIEIFEKAIIN--- 932

Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQ 259
                EA   L    + +     A++++     ++   P+
Sbjct: 933 --SDIEAKYNLATTLIEINDNTRAKDLLREYTKLKPNNPE 970



 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 3/62 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y KA + LK++N+  A   ++      P       + +  A     +G   QA S  E+
Sbjct: 840 LYLKASINLKKENYQNAISLYSLVIEKNPEN---TSAYINLAKAYEKSGNKSQAISTLEK 896

Query: 120 YI 121
            I
Sbjct: 897 II 898



 Score = 36.2 bits (83), Expect = 4.3,   Method: Composition-based stats.
 Identities = 12/124 (9%), Positives = 44/124 (35%), Gaps = 18/124 (14%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
            +   ++  D +  + +   A  +    +  KA   + +  +       A++       +
Sbjct: 624 NEFLKNNPNDAQASKTL---AQAYENNGDLLKAENAYEKIIKL----TNAQEDHYKLGII 676

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           ++   KY+ +    ++ I   P+ K      +  G++   + ++        K  ++   
Sbjct: 677 RFKLKKYEHSIESFDQTIKLDPKHKK---ALHNKGIALMMLNKN--------KKAIESFE 725

Query: 164 RIVE 167
           + ++
Sbjct: 726 KAIQ 729


>gi|226321528|ref|ZP_03797054.1| FF domain protein [Borrelia burgdorferi Bol26]
 gi|226232717|gb|EEH31470.1| FF domain protein [Borrelia burgdorferi Bol26]
          Length = 1119

 Score = 38.6 bits (89), Expect = 0.94,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 44/220 (20%)

Query: 62   EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLG 117
            +  ++     NF ++ EY N       F   A+K    ++   +  ++   K +++    
Sbjct: 881  KAGIVSNNLGNFKQSEEYLNF------FNANAKKPNEIAIYNLSIAKFENNKLEESLETI 934

Query: 118  EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYV 175
             + I   P  +  +Y  YL      +            +  +   S ++E+     S Y+
Sbjct: 935  NKAIDLNP--EKSEY-LYLKASINLKK--------ENYQNAISLYSLVIEKNPENTSAYI 983

Query: 176  KGARFYVTVGRNQLAAKEVE-------------IGRYYLKRGEYVAAIPRFQLVLANYSD 222
              A+ Y   G    A   +E             +G  Y K   Y  AI  F+  + N   
Sbjct: 984  NLAKAYEKSGNKSQAISTLEKIINKNNKLALNNLGILYKKEKNYQKAIEIFEKAIIN--- 1040

Query: 223  AEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQ 259
                 EA   L    + +     A++++     ++   P+
Sbjct: 1041 --SDIEAKYNLATTLIEINDNTRAKDLLREYTKLKPNNPE 1078



 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 3/62 (4%)

Query: 60   VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            +Y KA + LK++N+  A   ++      P       + +  A     +G   QA S  E+
Sbjct: 948  LYLKASINLKKENYQNAISLYSLVIEKNPEN---TSAYINLAKAYEKSGNKSQAISTLEK 1004

Query: 120  YI 121
             I
Sbjct: 1005 II 1006



 Score = 36.2 bits (83), Expect = 4.3,   Method: Composition-based stats.
 Identities = 12/124 (9%), Positives = 44/124 (35%), Gaps = 18/124 (14%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
            +   ++  D +  + +   A  +    +  KA   + +  +       A++       +
Sbjct: 732 NEFLKNNPNDAQASKTL---AQAYENNGDLLKAENAYEKIIKL----TNAQEDHYKLGII 784

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           ++   KY+ +    ++ I   P+ K      +  G++   + ++        K  ++   
Sbjct: 785 RFKLKKYEHSIESFDQTIKLDPKHKK---ALHNKGIALMMLNKN--------KKAIESFE 833

Query: 164 RIVE 167
           + ++
Sbjct: 834 KAIQ 837


>gi|119513026|ref|ZP_01632083.1| Peptidase M48 [Nodularia spumigena CCY9414]
 gi|119462306|gb|EAW43286.1| Peptidase M48 [Nodularia spumigena CCY9414]
          Length = 470

 Score = 38.6 bits (89), Expect = 0.94,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 27/87 (31%), Gaps = 5/87 (5%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
            + L+   +      +Y +A       N         +    FP +    K+       Q
Sbjct: 116 KMLLEKQPEFVPAYALYAEASKKY--GNEKDVIPILEKGVATFPESVELNKA---LIKAQ 170

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVD 131
             A +Y +A+    ++   YP S    
Sbjct: 171 EEAEQYLEASITARQFAIVYPNSPEAA 197


>gi|42526637|ref|NP_971735.1| TPR domain-containing protein [Treponema denticola ATCC 35405]
 gi|41816830|gb|AAS11616.1| TPR domain protein [Treponema denticola ATCC 35405]
          Length = 725

 Score = 38.6 bits (89), Expect = 0.94,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 72/218 (33%), Gaps = 44/218 (20%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLM 99
           + ++    +   +     +  + V FLK  N + A   F++ S   P +      K  L 
Sbjct: 240 AKQNADAKTRAQMEEVDRLVSEGVNFLKNGNLNSALSSFSKASSKMPDSETSFTAKKYLD 299

Query: 100 SA-----FVQYS--AGKYQQAASLGEEYITQYPESKNVD----YVYYLVGMSYAQMIRDV 148
            A     +       G  ++A S  + YI    +S N D      +Y+        I D 
Sbjct: 300 MASALNDYASAREGTGDAEKALSDADSYIK---KSVNADGQNARAHYV-----YSQIADA 351

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
              Q+  ++    + +      +               N L   E+  G+ Y  RG Y  
Sbjct: 352 ---QKQPQVAFVELEKAQSLDPD---------------NYLYNYEL--GKKYYARGHYQK 391

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
           A   F+  + +       + A   L  +   L L +EA
Sbjct: 392 AKTSFERSVKSNPK---FDNAFFNLGMSCRKLGLENEA 426


>gi|39995489|ref|NP_951440.1| putative lipoprotein [Geobacter sulfurreducens PCA]
 gi|39982252|gb|AAR33713.1| lipoprotein, putative [Geobacter sulfurreducens PCA]
 gi|298504489|gb|ADI83212.1| lipoprotein, putative [Geobacter sulfurreducens KN400]
          Length = 74

 Score = 38.6 bits (89), Expect = 0.94,   Method: Composition-based stats.
 Identities = 11/87 (12%), Positives = 28/87 (32%), Gaps = 17/87 (19%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K    +    ++  L     +                +E+Y+ A    K+ N   A +
Sbjct: 1   MRKIT-VLALVASMLTLAACSGKG--------------VQELYDTAQFEEKQHNLEHATK 45

Query: 79  YFNQCSRDFPFAGVARKSL--LMSAFV 103
            + +     P + +A ++   L +   
Sbjct: 46  LYEEIVAKHPQSELAARAKERLEAIKA 72


>gi|316935712|ref|YP_004110694.1| TPR repeat-containing protein [Rhodopseudomonas palustris DX-1]
 gi|315603426|gb|ADU45961.1| TPR repeat-containing protein [Rhodopseudomonas palustris DX-1]
          Length = 220

 Score = 38.6 bits (89), Expect = 0.95,   Method: Composition-based stats.
 Identities = 15/123 (12%), Positives = 35/123 (28%), Gaps = 18/123 (14%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLG 117
           +  ++ + +  +NF  A +  +   +  P +     R++ +      Y    Y  +    
Sbjct: 103 LMARSKVAMDAKNFDVAVKLLDAVIKLKPDYVEGWNRRATI-----YYLQNDYMHSLEDI 157

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           E+ + + P          L G+                K  L    R +    +   V  
Sbjct: 158 EQVLAREPRHFGA-----LAGLGMIMQELGDD------KRALDAFRRALALNPHLDKVPD 206

Query: 178 ARF 180
              
Sbjct: 207 LVK 209


>gi|282879665|ref|ZP_06288396.1| tetratricopeptide repeat protein [Prevotella timonensis CRIS 5C-B1]
 gi|281306613|gb|EFA98642.1| tetratricopeptide repeat protein [Prevotella timonensis CRIS 5C-B1]
          Length = 221

 Score = 38.6 bits (89), Expect = 0.95,   Method: Composition-based stats.
 Identities = 25/199 (12%), Positives = 57/199 (28%), Gaps = 46/199 (23%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
           FF +    + G      R +       V     + + A+ + + + + +A   F+Q  ++
Sbjct: 5   FFILLWLIVSGSICHQMRGIVPSPSPTVDDTERL-KMALAYFQSEKYQEALNLFHQLDKE 63

Query: 87  FP----FAGV------------------------------ARKSLLMSAFV--QYSAGKY 110
           +     +                                 A +++   A     +   +Y
Sbjct: 64  YQLNPRYRAYIGLCHYQLWNYAEACNYLDSVSSALHVLAPAEQAVYYYANAESHFLLKEY 123

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           Q++ +  E ++     ++  D  YY +G  Y          Q       +Y S  +  Y 
Sbjct: 124 QESITYFEMFLNVCHANEKAD-AYYRLGFCYLY--------QHHWLTAYEYFSSALSYYR 174

Query: 171 NSPYVKGARFYVTVGRNQL 189
                   R  +      L
Sbjct: 175 QFGVTPQKRQRLVQLPKML 193


>gi|34499516|ref|NP_903731.1| hypothetical protein CV_4061 [Chromobacterium violaceum ATCC 12472]
 gi|34105366|gb|AAQ61721.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
           12472]
          Length = 582

 Score = 38.6 bits (89), Expect = 0.95,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 81/214 (37%), Gaps = 35/214 (16%)

Query: 65  VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS----AGKYQQAASLGEEY 120
           V  L+ ++ ++A ++  +     P       + L            A ++ +A S  E  
Sbjct: 236 VDRLRRKDINEAADFLQRELARRP------DAGLELQIAYPRLLVGAKRFPEARSAFEAL 289

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +  +P++ ++ Y     G+   QM      D +     LQ    +  +Y    +V+    
Sbjct: 290 LKTHPDNPDLLYA---TGLLAYQM-----RDLKTADDRLQ--RALARQYPEQDFVRYTLG 339

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRG---EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
            +    ++ A +    G +Y + G   +Y+ A  R   +L         +EA++RL    
Sbjct: 340 QIAE-DDRDAER---AGNWYRQVGPGQQYLPAQSRL-AMLEAADG--RLDEALSRL---- 388

Query: 238 VALALMDEAREVVSLIQERYP-QGYWARYVETLV 270
             L   D+ +  ++L+Q +   +    R    L+
Sbjct: 389 SGLGGTDQEKVSLALLQSQLAREAKQPRRAYDLL 422


>gi|326432946|gb|EGD78516.1| mbre TPR repeat protein [Salpingoeca sp. ATCC 50818]
          Length = 870

 Score = 38.6 bits (89), Expect = 0.95,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 60/232 (25%), Gaps = 59/232 (25%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQ--------CSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
               ++  +  + +A  ++ +             P              V Y  G++ +A
Sbjct: 529 NIGQVYAAKGEYDRAISFYKRSLQIRLDTLGSKHPDTATTHH---DMGHVYYRKGEHDRA 585

Query: 114 ASLGEEYITQY-----PESKNVD--YV----------YYLVGMSYAQMIRDVPYD----- 151
               E+ +  Y     P+  +    Y            Y   + Y Q    +  D     
Sbjct: 586 IECYEKGLQSYLDTLGPQHPHTATTYASLGQVHGVKGEYDRAIHYYQQCLQIRLDTLGEK 645

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFY-VTVGRNQLAAKE-------VEIGRYYLKR 203
             +T      M ++                 + +  + L  K          IG+ Y  +
Sbjct: 646 HPSTASTYNNMGQVYSGKGEHDRAIEYYQKSLQIALDTLGEKHPDTAATYNNIGQVYYAK 705

Query: 204 GEYVAAIPRFQLVL--------ANYSDAEHAEEAMARLVEAYVALALMDEAR 247
            +Y  A   F+  +          + D              Y  L  + +++
Sbjct: 706 SQYDRATHYFEKSVEIKLDMFGEKHPDT----------ATTYSNLGAVHDSK 747


>gi|324502765|gb|ADY41215.1| Lysine-specific demethylase 6A [Ascaris suum]
          Length = 1057

 Score = 38.6 bits (89), Expect = 0.95,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 33/113 (29%), Gaps = 28/113 (24%)

Query: 98  LMSAFVQYSAGKYQQAASLG--------EEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           L    V   A  + +A S          + +        +    Y+ +G+ Y        
Sbjct: 74  LKLGHVNLLAKDFAKALSAYQKAYNLDADRFWR----DPS---AYFGLGLVYFHF----- 121

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ-----LAAKEVEIG 197
              RA  +  +  +R++  Y N P        +           LA K + I 
Sbjct: 122 ---RAFSIAAESFNRLLFTYPNLPISIEVHARLGFIYKNLEKFDLALKHLNIA 171


>gi|312886240|ref|ZP_07745854.1| TPR repeat-containing protein [Mucilaginibacter paludis DSM 18603]
 gi|311301265|gb|EFQ78320.1| TPR repeat-containing protein [Mucilaginibacter paludis DSM 18603]
          Length = 244

 Score = 38.6 bits (89), Expect = 0.95,   Method: Composition-based stats.
 Identities = 7/71 (9%), Positives = 19/71 (26%), Gaps = 3/71 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++ K      +  +  A + +            +           Y  G+   A    E+
Sbjct: 18  LFTKGNDQYAKAKYQDAVKTYQAILDK---GYQSAVVYFNMGNAYYKLGEIPSAVLYYEK 74

Query: 120 YITQYPESKNV 130
                P  +++
Sbjct: 75  AHKLAPGDEDI 85


>gi|260903512|ref|ZP_05911907.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus AQ4037]
 gi|308107607|gb|EFO45147.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus AQ4037]
          Length = 391

 Score = 38.6 bits (89), Expect = 0.95,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 58/186 (31%), Gaps = 34/186 (18%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A  ++      +A + F Q   +  +   A +  L++ +      ++++A     +    
Sbjct: 114 AKDYMVSGFLDRAEKIFEQLVEEPDYKEAALQ-QLVTIY--QQTREWEKAIHYANQLAKM 170

Query: 124 -YPESK---NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
               S+   N+ +        +   I  +      +   +Q+  + +             
Sbjct: 171 GNQRSRMRTNIAH--------FWCEIAMLDQADGNSNKAIQHFKKALSEDPKCVRAS--- 219

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                         + +GR YL+  +Y   I     VL    D +   + +  + E Y  
Sbjct: 220 --------------ISLGRIYLESEDYKQTIKYLTGVLE--QDKDFVSDVLPTIAECYHH 263

Query: 240 LALMDE 245
           L   DE
Sbjct: 264 LGQEDE 269


>gi|254469914|ref|ZP_05083319.1| peptidase M48, Ste24p [Pseudovibrio sp. JE062]
 gi|211961749|gb|EEA96944.1| peptidase M48, Ste24p [Pseudovibrio sp. JE062]
          Length = 480

 Score = 38.6 bits (89), Expect = 0.95,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 61/159 (38%), Gaps = 31/159 (19%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFP----FAGVARKSLLMSAFVQYSAGKYQQAASL 116
           Y +A+  ++    SKA    +      P    F  +  ++LL         GK + A + 
Sbjct: 308 YARAIASMRSDKVSKAVRKIDALIAKAPEYPYFYEIKGQALLE-------GGKPKAAIAP 360

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE--RYTNSPY 174
             + +  YP + +     + + + +A +      DQR  K     ++R ++  RY+ + Y
Sbjct: 361 FRKALALYPGNPH-----FEIWLGFAMV---ASNDQRYLKEAKSILTRALQKDRYSMNGY 412

Query: 175 VK--GARFY--------VTVGRNQLAAKEVEIGRYYLKR 203
            +   A           +   ++ +A  ++   + Y KR
Sbjct: 413 AQLAIANARLGDVAGADLATAQSHMARGDIRSAQRYAKR 451


>gi|220917161|ref|YP_002492465.1| Lytic transglycosylase catalytic [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219955015|gb|ACL65399.1| Lytic transglycosylase catalytic [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 750

 Score = 38.6 bits (89), Expect = 0.95,   Method: Composition-based stats.
 Identities = 23/171 (13%), Positives = 45/171 (26%), Gaps = 28/171 (16%)

Query: 27  FFSIAVCFLVGWERQSS----RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
            + +A    +  +R  +    R +  D          ++  A L  +     +A E    
Sbjct: 310 LYLLAGASSISGDRDEAVALYRQLARDFAGHAFADDALFFAADLLARAGKSQEAREALAA 369

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG----------EEYITQYPESKNVDY 132
             RD P      ++    A++   AG    A +            + Y     E     Y
Sbjct: 370 LVRDHPGGDYREEARFRLAWLLKQAGDLDGAVAQLLAVEEEQAGRDGY-----EHARAAY 424

Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
                     +        +   +      + +  RY    Y   AR  + 
Sbjct: 425 ---------WRARLLAGRGEDGRRAAEAVFTELATRYPTDYYGLLARARLD 466


>gi|149919240|ref|ZP_01907723.1| hypothetical protein PPSIR1_02446 [Plesiocystis pacifica SIR-1]
 gi|149819954|gb|EDM79376.1| hypothetical protein PPSIR1_02446 [Plesiocystis pacifica SIR-1]
          Length = 289

 Score = 38.6 bits (89), Expect = 0.95,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 25/71 (35%), Gaps = 4/71 (5%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
            D    RE Y +     ++ +F  A E F + +  +     +       A      G Y+
Sbjct: 47  ADAERAREAYVRGTQLYQDADFEAALEAFQEAATYYA----SPDFQFNIARCYERLGNYE 102

Query: 112 QAASLGEEYIT 122
           +A    E Y+ 
Sbjct: 103 EAIRHYEIYLR 113


>gi|154341282|ref|XP_001566594.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134063917|emb|CAM40108.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 873

 Score = 38.6 bits (89), Expect = 0.95,   Method: Composition-based stats.
 Identities = 22/169 (13%), Positives = 53/169 (31%), Gaps = 15/169 (8%)

Query: 9   ICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL 68
           +       + + +          +  + G    +S    L     VR   + Y + V  +
Sbjct: 31  LEEAAKSEHNVNELLSIHCLRATLAAMKGSMDVTSITAQLAPGEPVRLPVQSYLEGVAAM 90

Query: 69  KEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
              + + A         R   F      +L+  A V Y   +Y+++ +     +  +  S
Sbjct: 91  ARGDLATARRRLETAVERCEGFGA----ALVCLAAVYYLTSQYEKSYAQYCYTLKMF-GS 145

Query: 128 KNVDYVYYL-VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
                V  + +G+   ++ R V           + + R +E + +    
Sbjct: 146 DEAPSVVRVGMGLCAFRLQRLVD--------ARRILERAIEVHPDDELA 186


>gi|134045733|ref|YP_001097219.1| hypothetical protein MmarC5_0693 [Methanococcus maripaludis C5]
 gi|132663358|gb|ABO35004.1| Tetratricopeptide TPR_2 repeat protein [Methanococcus maripaludis
           C5]
          Length = 395

 Score = 38.6 bits (89), Expect = 0.95,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 36/104 (34%), Gaps = 5/104 (4%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S+ + +  ++++ K + +     + KA E FN+     P       +            K
Sbjct: 5   SIFETKEPKKLFGKGMEYYNRGKYQKAIELFNKTINSEPNNPH---AWYFKGHAYQMLDK 61

Query: 110 YQQAASLGEEYITQYPESKNV--DYVYYLVGMSYAQMIRDVPYD 151
            + A    E+ ++  P    +  +Y   L  +       +V  D
Sbjct: 62  PKLAQDSYEKALSISPNDLEMVKNYAMLLNSLELFNESVEVLKD 105


>gi|119510448|ref|ZP_01629581.1| hypothetical protein N9414_01642 [Nodularia spumigena CCY9414]
 gi|119464870|gb|EAW45774.1| hypothetical protein N9414_01642 [Nodularia spumigena CCY9414]
          Length = 731

 Score = 38.6 bits (89), Expect = 0.95,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 70/210 (33%), Gaps = 28/210 (13%)

Query: 55  RYQREVYEKAV-LFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
              R +Y  A  + +  +   KA   +NQ  + FP A     +LL  +     A   Q+A
Sbjct: 259 PTPRNLYRAARGIQIGGKEREKAIATYNQLVQKFPEASETGLALLRLSE---LARSRQEA 315

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
               +  I  +P  +            Y ++   +        L  Q    ++ +Y +S 
Sbjct: 316 IPYLDRIIANFP--EQASRAIVEKAKIYQELNEQI--------LAQQAWELLLSQYGSS- 364

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
                        NQ A    E  +   K   Y  A    Q +  N  ++  A  A   +
Sbjct: 365 -------------NQAAEYRWEKAKEQAKAQNYAGAWQWAQPIATNNPNSILAPRAGFWV 411

Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWA 263
            +  + L    EA+     +  ++P  Y+A
Sbjct: 412 GKWAIRLGKPQEAKAAYEYVLSQFPYSYYA 441


>gi|29839817|ref|NP_828923.1| type III secretion chaperone, putative [Chlamydophila caviae GPIC]
 gi|29834164|gb|AAP04801.1| type III secretion chaperone, putative [Chlamydophila caviae GPIC]
          Length = 335

 Score = 38.6 bits (89), Expect = 0.95,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 39/112 (34%), Gaps = 14/112 (12%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D    + +Y KAV+     N  +A           P      K+ +   ++     ++ +
Sbjct: 141 DPWNPQSMYNKAVVLTDMDNELEAIALLETTVSKNPL-YW--KAWIKLGYLLSRHKQWDK 197

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           A    E  +   P   ++   +Y +G+ Y  + +        T+L L+    
Sbjct: 198 ATEAYERVVQLRP---DLSDGHYNLGLCYLTLDK--------TRLALKAFQE 238


>gi|85708479|ref|ZP_01039545.1| hypothetical protein NAP1_04550 [Erythrobacter sp. NAP1]
 gi|85690013|gb|EAQ30016.1| hypothetical protein NAP1_04550 [Erythrobacter sp. NAP1]
          Length = 492

 Score = 38.6 bits (89), Expect = 0.95,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 44/126 (34%), Gaps = 15/126 (11%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           +F  +    L       S      +++      E+ + A + +   N S+A +Y+++   
Sbjct: 4   LFAILGAIALSSCSG-DSETAASTAISGGPDFLELIDDARVSVNAGNLSEAGQYYDEARE 62

Query: 86  DFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
             P           +  A +++  G++  A    +  +   P+  +      +      Q
Sbjct: 63  LEPENPGLW-----VEIARLRFRGGEHLTAIEAADYALELDPQYPS---ALLMRA----Q 110

Query: 144 MIRDVP 149
           ++RD  
Sbjct: 111 LVRDAN 116


>gi|66805883|ref|XP_636663.1| hypothetical protein DDB_G0288595 [Dictyostelium discoideum AX4]
 gi|60465051|gb|EAL63157.1| hypothetical protein DDB_G0288595 [Dictyostelium discoideum AX4]
          Length = 407

 Score = 38.6 bits (89), Expect = 0.95,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           I   ++K  E   AI  ++ +L+N  D       +   ++ Y  L   D+  + +S+I+E
Sbjct: 220 IAELFIKSNEIEKAIEIYENLLSN--DTTQLLRTLLGFIQCYTNLNEPDQVEKYLSIIKE 277

Query: 256 RYPQ 259
           ++P 
Sbjct: 278 KFPN 281


>gi|186684583|ref|YP_001867779.1| signal transduction protein [Nostoc punctiforme PCC 73102]
 gi|186467035|gb|ACC82836.1| putative signal transduction protein with Nacht domain protein
            [Nostoc punctiforme PCC 73102]
          Length = 1815

 Score = 38.6 bits (89), Expect = 0.95,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 74/222 (33%), Gaps = 38/222 (17%)

Query: 71   QNFSKAYEYFNQCSRDFPF----AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP- 125
              + +A  YF Q    +        VA +     A      GKY+QA   G++ + QY  
Sbjct: 1179 GKYEQAITYFQQSRDLYEQLGKEKDVANQC-YNLARCYREWGKYEQALECGQKCLAQYQK 1237

Query: 126  --ESKNVDYVYYLVG------------MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
              +  ++   Y+ +G            ++Y Q  R++       K +     R+   Y +
Sbjct: 1238 LEDEPDIASAYFQLGSIHQAWGKYKQAIAYFQQSRNLYEQLGKEKNVADLWYRLASCYRD 1297

Query: 172  SPYVKGARFYVTVGRNQLAAKEV----EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
                + A  Y    ++  + +++     I   Y + G    A  +++  +  +  +    
Sbjct: 1298 WGKYQQAVEY--ELKDLASRQQLDDQTNIADGYNQLGRIYQAWGKYEQAIPYFQQSR--- 1352

Query: 228  EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
                   E Y  L L          +   Y    W +Y + L
Sbjct: 1353 -------ERYEQLGLEKNVASQWYNLAGCY--REWDKYEQAL 1385


>gi|324502148|gb|ADY40947.1| Lysine-specific demethylase 6A [Ascaris suum]
          Length = 1099

 Score = 38.6 bits (89), Expect = 0.96,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 33/113 (29%), Gaps = 28/113 (24%)

Query: 98  LMSAFVQYSAGKYQQAASLG--------EEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           L    V   A  + +A S          + +        +    Y+ +G+ Y        
Sbjct: 74  LKLGHVNLLAKDFAKALSAYQKAYNLDADRFWR----DPS---AYFGLGLVYFHF----- 121

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ-----LAAKEVEIG 197
              RA  +  +  +R++  Y N P        +           LA K + I 
Sbjct: 122 ---RAFSIAAESFNRLLFTYPNLPISIEVHARLGFIYKNLEKFDLALKHLNIA 171


>gi|322796271|gb|EFZ18847.1| hypothetical protein SINV_80216 [Solenopsis invicta]
          Length = 1022

 Score = 38.6 bits (89), Expect = 0.96,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 51/141 (36%), Gaps = 24/141 (17%)

Query: 133 VYYLVGM------SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------R 179
            Y L+ +      +  Q  +D   ++R     L    +++     + +           +
Sbjct: 586 AYSLIALGNIWLQTLHQSGKDKEREKRHQDRALAMYKQVLRNDPKNIWASNGIGAVLAHK 645

Query: 180 FYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
             V   R+  A  +E         + I   Y+++ ++V+AI  ++  L  +    H  E 
Sbjct: 646 GCVNEARDIFAQVREATAEFCDVWLNIAHIYVEQKQFVSAIQMYENCLRKFYKYHHV-EV 704

Query: 230 MARLVEAYVALALMDEAREVV 250
           +  L  AY     + E++  +
Sbjct: 705 LQYLGRAYFKAGKLKESKLTL 725


>gi|302038729|ref|YP_003799051.1| hypothetical protein NIDE3440 [Candidatus Nitrospira defluvii]
 gi|300606793|emb|CBK43126.1| conserved protein of unknown function, TPR-like [Candidatus
           Nitrospira defluvii]
          Length = 561

 Score = 38.6 bits (89), Expect = 0.96,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 43/150 (28%), Gaps = 39/150 (26%)

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
           L    +QY   +Y +A     E     P+       + ++G+S+ Q            + 
Sbjct: 320 LHLGVLQYRTKQYAEAIQHLREASLLNPKQPE---AHIVLGLSHFQ--------VEQYEP 368

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
            LQ     +    ++                 A      G  Y K       + RF  V+
Sbjct: 369 SLQAFQEGIRHNPDN-----------------ADLHFNAGTAYDK-------LNRFDEVV 404

Query: 218 ANYSDA----EHAEEAMARLVEAYVALALM 243
            +         H  +AM  L  +Y    + 
Sbjct: 405 KSMQTTLALDPHHADAMNYLGYSYAERGVK 434


>gi|296127703|ref|YP_003634955.1| lytic transglycosylase catalytic [Brachyspira murdochii DSM 12563]
 gi|296019519|gb|ADG72756.1| Lytic transglycosylase catalytic [Brachyspira murdochii DSM 12563]
          Length = 752

 Score = 38.6 bits (89), Expect = 0.96,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 40/112 (35%), Gaps = 8/112 (7%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A +  +  +   A + F++   +       R  L  SA        Y ++  L   +
Sbjct: 239 YYMARIKQQAGDREDAAKLFDEYLSNANNKTHRRLGLYYSADNYNRLKNYDKSIELYNTF 298

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           + +YP    V  +Y            +V  ++        Y++ +++++  S
Sbjct: 299 LKEYPRDDYVPRIY--------NNFVNVSLNRNNLVQAKTYLTNVMKKFPKS 342


>gi|254438730|ref|ZP_05052224.1| tetratricopeptide repeat domain protein [Octadecabacter antarcticus
           307]
 gi|198254176|gb|EDY78490.1| tetratricopeptide repeat domain protein [Octadecabacter antarcticus
           307]
          Length = 456

 Score = 38.6 bits (89), Expect = 0.96,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 51/149 (34%), Gaps = 23/149 (15%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDY----VYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           + AG++  A    + Y+ +YP    V +      Y   M   +M R      RA  L   
Sbjct: 17  HRAGRHSDALEGYKRYLQRYPTDAGV-WTNLGSLY-RAMGRHEMGRTAQ--MRAYALAPN 72

Query: 161 YMSRIVERYTN-----SPYVKGARFYVTVGR---NQLAAKEVEIGRYYLKRGEYVAAIPR 212
               ++  Y+N       Y    +      +   + L    + IGR +   G+Y AAI  
Sbjct: 73  D-KGVINNYSNILSDLGDYTGSIKLRKKSLKIDPSHLMHHAM-IGRCFRGMGDYGAAIKY 130

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALA 241
              +   + +         RL  A+  L 
Sbjct: 131 LTPMAKKFPEEPEI-----RLQLAFAQLG 154


>gi|75677027|ref|YP_319448.1| peptidase C14, caspase catalytic subunit p20 [Nitrobacter
           winogradskyi Nb-255]
 gi|74421897|gb|ABA06096.1| peptidase C14, caspase catalytic subunit p20 [Nitrobacter
           winogradskyi Nb-255]
          Length = 708

 Score = 38.6 bits (89), Expect = 0.96,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 20/46 (43%), Gaps = 2/46 (4%)

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
               + +T      + R ++RY +SP     +  + V +N  A +E
Sbjct: 335 FDRLKDSTDQA--ALKRFIKRYPDSPLALQVQHRLEVLQNAAAERE 378


>gi|330506492|ref|YP_004382920.1| TPR-repeat-containing protein [Methanosaeta concilii GP-6]
 gi|328927300|gb|AEB67102.1| TPR-repeat protein [Methanosaeta concilii GP-6]
          Length = 172

 Score = 38.6 bits (89), Expect = 0.97,   Method: Composition-based stats.
 Identities = 20/151 (13%), Positives = 51/151 (33%), Gaps = 18/151 (11%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              +     +   K    +K+ ++  A   +N+  +  P      ++     +      K
Sbjct: 30  DPFEPDIPNQWVNKGHELVKKGSYKDAINCYNEALKLNPNLP---RAWCSKGYALIKLKK 86

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y+++ +  +E +   P   +    + + G ++    +         K  L Y+ R +E  
Sbjct: 87  YKESHACLDEALRINPRHVS---CWTIKGWAFNCQNKH--------KDALVYLDRAIELD 135

Query: 170 TNSPYVKGARFYVTVGR--NQLAAKEVEIGR 198
            +  YV             N+ A  +V + +
Sbjct: 136 PH--YVDAWYQKHLALNDLNRKAEADVALAK 164


>gi|307105375|gb|EFN53624.1| hypothetical protein CHLNCDRAFT_36304 [Chlorella variabilis]
          Length = 602

 Score = 38.6 bits (89), Expect = 0.97,   Method: Composition-based stats.
 Identities = 14/125 (11%), Positives = 36/125 (28%), Gaps = 20/125 (16%)

Query: 62  EKAVLFLKEQNFSKAYEYF----NQCSRDFPFAGVARKSL--------LMSAFVQYSAGK 109
           +K     K   +S+A + +         D  F+   +++         L  A      G 
Sbjct: 406 DKGNAAFKAGQYSRAVQRYNKAQEIIEFDEGFSAEDKQAAKAVKKSCSLNLAAAHLKLGN 465

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYA--QMIRDVPYDQR---ATKLMLQYMSR 164
             +A    ++ +     +       Y    ++       +   D R   A          
Sbjct: 466 PVEARKAADKVLEADGSNPK---ALYRRAQAWLATADFTEAELDIRRGLAEDPASSDFKL 522

Query: 165 IVERY 169
           +++++
Sbjct: 523 LLKKF 527


>gi|254446142|ref|ZP_05059618.1| protein kinase domain [Verrucomicrobiae bacterium DG1235]
 gi|198260450|gb|EDY84758.1| protein kinase domain [Verrucomicrobiae bacterium DG1235]
          Length = 725

 Score = 38.6 bits (89), Expect = 0.97,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 16/90 (17%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE--AYVALALMDEAR---- 247
           + +  Y  +R  Y AA+   +  L  Y D     +A ARLV   A   +   DEA+    
Sbjct: 623 MSLALYEYRRANYAAAVSYAKRCL-GYPDPNAPRDATARLVLAMASYQMGRTDEAQAAFF 681

Query: 248 EVVSLIQERYP---------QGYWARYVET 268
           +  +++ E++          QG+W  +V  
Sbjct: 682 KARTVVNEKFQREIDLGNPVQGFWFDWVFA 711


>gi|254411394|ref|ZP_05025171.1| Methyl-accepting chemotaxis protein signaling domain [Microcoleus
           chthonoplastes PCC 7420]
 gi|196181895|gb|EDX76882.1| Methyl-accepting chemotaxis protein signaling domain [Microcoleus
           chthonoplastes PCC 7420]
          Length = 1041

 Score = 38.6 bits (89), Expect = 0.97,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 39/110 (35%), Gaps = 7/110 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A     +  + +A +  ++   ++P    A   LL      Y   +Y+QA    E+ 
Sbjct: 11  YTHAQTAYAQGKYQEAADLISRLIEEYPDDPSAL--LLKGHICCYGLQQYEQAREHYEQV 68

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIR---DVPYDQRATKLMLQYMSRIVE 167
           +    E   ++Y +   G+  A  +    D      +T+        I E
Sbjct: 69  LNLTSEPDFIEYAH--KGLEDANQLSSEFDSVDSPPSTEDFDNNFHDIDE 116


>gi|146305154|ref|YP_001185619.1| hypothetical protein Pmen_0113 [Pseudomonas mendocina ymp]
 gi|145573355|gb|ABP82887.1| hypothetical protein Pmen_0113 [Pseudomonas mendocina ymp]
          Length = 349

 Score = 38.6 bits (89), Expect = 0.97,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 22/52 (42%), Gaps = 3/52 (5%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           +  ++ +A E     +R  P   VA    L  A   ++ G+ +QA     +Y
Sbjct: 280 QAGHYPEAVELLQHITRRHPDRVVAN---LNLADAYWALGEREQAREAYGQY 328


>gi|67901400|ref|XP_680956.1| hypothetical protein AN7687.2 [Aspergillus nidulans FGSC A4]
 gi|40742683|gb|EAA61873.1| hypothetical protein AN7687.2 [Aspergillus nidulans FGSC A4]
 gi|259484029|tpe|CBF79904.1| TPA: mitochondrial outer membrane translocase receptor (TOM70),
           putative (AFU_orthologue; AFUA_2G01660) [Aspergillus
           nidulans FGSC A4]
          Length = 636

 Score = 38.6 bits (89), Expect = 0.97,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 46/141 (32%), Gaps = 20/141 (14%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGV 92
           +G +  +  D  L    +       Y +A L      F++A + + +     R F ++  
Sbjct: 395 LGNKDAAQDDFELAITHNKDDPDIYYHRAQLHFILGEFAEAAKDYQKSIDLDRTFIYSH- 453

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
                +     QY  G    A +     +  +   ++V  VY            ++  DQ
Sbjct: 454 -----IQLGVTQYKMGSVASAMATFRRSVKNF---EDVPDVY--------NYYGELLLDQ 497

Query: 153 RATKLMLQYMSRIVERYTNSP 173
           +     ++   + VE    S 
Sbjct: 498 QNFSEAIEKFDKAVEMEKQSK 518


>gi|325297743|ref|YP_004257660.1| Tetratricopeptide TPR_1 repeat-containing protein [Bacteroides
           salanitronis DSM 18170]
 gi|324317296|gb|ADY35187.1| Tetratricopeptide TPR_1 repeat-containing protein [Bacteroides
           salanitronis DSM 18170]
          Length = 257

 Score = 38.6 bits (89), Expect = 0.98,   Method: Composition-based stats.
 Identities = 8/71 (11%), Positives = 18/71 (25%), Gaps = 7/71 (9%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEE 119
            +A    +E  F+ A   +               + +        Y      +A    E 
Sbjct: 32  AEADQAYQENKFADAIAAYETIL-----GTEGESADIYYNLGNCYYKTKNIAKAVLNYER 86

Query: 120 YITQYPESKNV 130
            +   P   ++
Sbjct: 87  ALLLNPGDADI 97


>gi|307718491|ref|YP_003874023.1| TPR domain-containing protein [Spirochaeta thermophila DSM 6192]
 gi|306532216|gb|ADN01750.1| TPR domain protein [Spirochaeta thermophila DSM 6192]
          Length = 382

 Score = 38.6 bits (89), Expect = 0.98,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 30/88 (34%), Gaps = 6/88 (6%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++ ++    LK+    +A   F +          A   L+         G++ +A S   
Sbjct: 32  QLSQEGYALLKQDRPEEAIIRFEKILELDRHNNYA---LVGLGDAYRKKGEHDRAVSYYR 88

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIR 146
           E +  YP +    Y  + +   Y    R
Sbjct: 89  ECLRYYPGNN---YALFGLADCYKAQER 113


>gi|301773824|ref|XP_002922327.1| PREDICTED: RNA polymerase II-associated protein 3-like [Ailuropoda
           melanoleuca]
          Length = 667

 Score = 38.6 bits (89), Expect = 0.98,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 72/225 (32%), Gaps = 33/225 (14%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D +    + EK   + K+  + +A E + +     P+  V        A   +   K+  
Sbjct: 129 DSQKALALKEKGNKYFKQGKYDEAIECYTKGMDADPYNPVLPT---NRASAYFRLKKFAV 185

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYA--QMIRDVPYD-------QRATKLMLQYMS 163
           A S     I     S    Y     G +    Q + D   D       +      +  + 
Sbjct: 186 AESDCNLAIALN-RSYTKAYA--RRGAARFALQKLEDAKKDYEKVLELEPNNFEAMNELK 242

Query: 164 RIVERYT--NSPYVKGARFYVTVG-----------RNQLAAKEVEIGRYYLKRGEYVAAI 210
           +I +      + Y K A   +                Q A  E ++G  + K G+Y  AI
Sbjct: 243 KINQALPSKENSYPKEADTMIKSTEGEKKQIEEQQNKQQAISEKDLGNGFFKEGKYERAI 302

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE--VVSLI 253
             +   +A          A   +  AY+ +   +EA +    +++
Sbjct: 303 ECYTRGIAA-DGTNALLPANRAM--AYLKIQKYEEAEKDCTQAIL 344


>gi|270340079|ref|ZP_06006964.2| conserved hypothetical protein [Prevotella bergensis DSM 17361]
 gi|270332760|gb|EFA43546.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
          Length = 260

 Score = 38.6 bits (89), Expect = 0.98,   Method: Composition-based stats.
 Identities = 8/70 (11%), Positives = 18/70 (25%), Gaps = 4/70 (5%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
            A +  +  ++  A   +    +       +           Y +     A    E    
Sbjct: 37  DADMAYRRGDYQHAIASYQNLLKQ----RKSADIYYNLGNAYYRSDSITMAILAYERASL 92

Query: 123 QYPESKNVDY 132
             P  K++ Y
Sbjct: 93  LSPGDKDIRY 102


>gi|256425984|ref|YP_003126637.1| hypothetical protein Cpin_7035 [Chitinophaga pinensis DSM 2588]
 gi|256040892|gb|ACU64436.1| TPR repeat-containing protein [Chitinophaga pinensis DSM 2588]
          Length = 384

 Score = 38.6 bits (89), Expect = 0.98,   Method: Composition-based stats.
 Identities = 11/114 (9%), Positives = 34/114 (29%), Gaps = 22/114 (19%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAASLG 117
            +A+  +     +++    N+  +  P         +   +     +Y    +  A    
Sbjct: 32  NEAIELMDNGKLAESITLLNEARKLDPT-------QMDIVYELALAKYQQKDFNDAIKDL 84

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           +  I Q+  +  V             M+ +V  D    +  +      ++++  
Sbjct: 85  KYLIKQHAANGRV-----------YAMLGNVQDDMGKPEKAIDTYDEGLKQFPK 127



 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 3/66 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           VYE A+   ++++F+ A +      +     G   +   M   VQ   GK ++A    +E
Sbjct: 64  VYELALAKYQQKDFNDAIKDLKYLIKQHAANG---RVYAMLGNVQDDMGKPEKAIDTYDE 120

Query: 120 YITQYP 125
            + Q+P
Sbjct: 121 GLKQFP 126


>gi|170046777|ref|XP_001850926.1| serine/threonine-protein phosphatase 5 [Culex quinquefasciatus]
 gi|167869430|gb|EDS32813.1| serine/threonine-protein phosphatase 5 [Culex quinquefasciatus]
          Length = 506

 Score = 38.6 bits (89), Expect = 0.98,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 44/147 (29%), Gaps = 33/147 (22%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQC-----SRDFPFAGVARKSLLMSAFV 103
              D     ++  +A    K +++  A   + +       S  +     A +S     F 
Sbjct: 29  EPADKERAEDLKNQANECFKNKDYENAVRLYTDALGVDGNSAIY----YANRS-----FA 79

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQY 161
                 +  A +   + I   P      Y+  YY    ++  +           KL LQ 
Sbjct: 80  YLRQEAFGYALNDAVQAIKCNP-----AYLKGYYRRAGAHMAL--------GKFKLALQD 126

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +  + +R  N      A+   +  +  
Sbjct: 127 LEFVAKRCPNDK---DAQMKYSECKKI 150


>gi|146184699|ref|XP_001029949.2| SLEI family protein [Tetrahymena thermophila]
 gi|146143045|gb|EAR82286.2| SLEI family protein [Tetrahymena thermophila SB210]
          Length = 2342

 Score = 38.6 bits (89), Expect = 0.98,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 57/173 (32%), Gaps = 34/173 (19%)

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
           ++A +Y+ +     P      K+   S          ++A    ++ I   P+       
Sbjct: 366 NEAIQYYQKALELNP--DY-YKAHYNSGLAYEKDNLIEEAIESYKKAIKINPK------- 415

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
            +L  +     + D+  ++      ++   +IV+   NS Y                   
Sbjct: 416 -FLKALI---RLGDICVEREMIDEGIECFKKIVQLSPNSEYDF----------------- 454

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
             +G  YL +  Y  AI  ++  L          +A+  L  AY    + D+A
Sbjct: 455 FSLGELYLTKKIYEEAIKCYKKTLEINPQ---YIKALNNLGLAYEYQQMFDQA 504



 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 39/111 (35%), Gaps = 16/111 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
               L+ +++ + KA E +      +      + K L    +  Y +  + QA  + +  
Sbjct: 558 NMGYLYSQQKMYDKAIECYQSALQVN----ENSLKILNNLGYAYYKSNMHDQAIEIYKRV 613

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           I   P+S       Y +G++Y                 +++  ++ E +  
Sbjct: 614 IQIDPKSFL---ANYNIGVAYQMK--------NMFDEAIEFYKKVEEIFPK 653



 Score = 35.9 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 72/203 (35%), Gaps = 23/203 (11%)

Query: 67   FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
            +L ++ + +A EYFN+     P   VA           Y     ++A     + +   P 
Sbjct: 1039 YLDKKEYQQAIEYFNKVIELDPKEVVALN---NIGLAYYDQKMNEKALEYYNKALEINPT 1095

Query: 127  SKNVDY----VY-----YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
             +   Y    VY     Y   + Y   +  +   ++ + L ++ ++  +    NS   + 
Sbjct: 1096 FQQSIYNTGLVYEIQNQYEKALEYYNKVLKINPTEKKSLLRVEKINEKIGNI-NSEKPEE 1154

Query: 178  ARFYVTVGRNQL-AAKEVEIG--RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
                    +N L +AKE       +Y +  +   +I   Q  +    +     EA  +L 
Sbjct: 1155 TSKK--EVQNTLSSAKEYYSKGYDFYAQMED-EKSIQCLQKAIEIDPN---YYEAYDKLG 1208

Query: 235  EAYVALALMDEA-REVVSLIQER 256
              Y    + DEA +  +  ++  
Sbjct: 1209 LIYGEKGMFDEAIQNYLKALEIN 1231


>gi|116329012|ref|YP_798732.1| cAMP-binding protein [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116330380|ref|YP_800098.1| cAMP-binding protein [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116121756|gb|ABJ79799.1| cAMP-binding protein [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116124069|gb|ABJ75340.1| cAMP-binding protein [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 405

 Score = 38.6 bits (89), Expect = 0.98,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 16/47 (34%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
                E+Y     +  ++N   A   F +  +  P    A ++ L  
Sbjct: 129 EEDPNELYNIGENYFNQKNNHHAAYAFQKYLQYLPNGPFATQAKLKL 175


>gi|86609433|ref|YP_478195.1| TPR repeat-containing protein [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86557975|gb|ABD02932.1| tetratricopeptide repeat protein [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 359

 Score = 38.6 bits (89), Expect = 0.98,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 32/112 (28%), Gaps = 16/112 (14%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           +Y    + L+  +  +A     +     P         L          G Y  AA   E
Sbjct: 145 LYVLGNVHLELGDLEQAIASLQKARALSPQDGA----VLYSLGSAYLRQGSYFAAAETLE 200

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             +   P++ N     + +G +Y  + R             Q   + ++   
Sbjct: 201 RAVALQPDNPN---ARFQLGNAYLMLDR--------WDAARQEYEKTLQLDP 241



 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 33/109 (30%), Gaps = 14/109 (12%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y     +L++ ++  A E   +     P    AR              ++  A    E+
Sbjct: 179 LYSLGSAYLRQGSYFAAAETLERAVALQPDNPNAR---FQLGNAYLMLDRWDAARQEYEK 235

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
            +   P         Y   M+   +   V Y+Q      +    R +E 
Sbjct: 236 TLQLDPA--------YWPAMNNMGL---VDYEQGDLDAAIDRWERTIEM 273


>gi|315917421|ref|ZP_07913661.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC
           25563]
 gi|313691296|gb|EFS28131.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC
           25563]
          Length = 145

 Score = 38.6 bits (89), Expect = 0.99,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 33/76 (43%), Gaps = 8/76 (10%)

Query: 70  EQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           ++++  A  +F +                   A+V Y   KY++A    E+ +   P S 
Sbjct: 11  KKDYDTAIYFFEKLMTLDATNGNWPGF----LAYVYYEQEKYKKAIPYFEKSVDLSPNSP 66

Query: 129 NVDYVYYLVGMSYAQM 144
            +   Y+L+G SY+++
Sbjct: 67  FI---YFLLGNSYSRL 79


>gi|294827634|ref|NP_710559.2| TPR-repeat-containing protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|293385477|gb|AAN47577.2| TPR-repeat-containing protein [Leptospira interrogans serovar Lai
           str. 56601]
          Length = 378

 Score = 38.6 bits (89), Expect = 0.99,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 39/128 (30%), Gaps = 11/128 (8%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           EKA      + +  A + F +       +    ++L   A    + GK   A       +
Sbjct: 236 EKARQLYVRKQYYGAIDTFKKALDMGVSSKAEEQALFYIAESYEAIGKSDSALQYLNRVL 295

Query: 122 TQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
               +  ++D    +  G  Y +            +          ++Y +SP  + A  
Sbjct: 296 GN--QDGSLDQTALFRKGTIYFKS--------GKYEKAAALFQEATDKYPDSPVGRKASA 345

Query: 181 YVTVGRNQ 188
           +     +Q
Sbjct: 346 WKKESLDQ 353



 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 1/62 (1%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV-SL 252
           +E  R    R +Y  AI  F+  L     ++  E+A+  + E+Y A+   D A + +  +
Sbjct: 235 LEKARQLYVRKQYYGAIDTFKKALDMGVSSKAEEQALFYIAESYEAIGKSDSALQYLNRV 294

Query: 253 IQ 254
           + 
Sbjct: 295 LG 296


>gi|293372752|ref|ZP_06619133.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CMC 3f]
 gi|292632261|gb|EFF50858.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CMC 3f]
          Length = 735

 Score = 38.6 bits (89), Expect = 0.99,   Method: Composition-based stats.
 Identities = 9/62 (14%), Positives = 24/62 (38%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           ++  ++  A  +L ++ + +A E + +      F G + +      +      KY +A  
Sbjct: 498 WEDVLFPIADFYLSKERWDEAIEIYEELETIGGFEGESAEYYQKFGYALQKRKKYAEAIQ 557

Query: 116 LG 117
             
Sbjct: 558 AY 559


>gi|237723273|ref|ZP_04553754.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|229447795|gb|EEO53586.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
          Length = 734

 Score = 38.6 bits (89), Expect = 0.99,   Method: Composition-based stats.
 Identities = 9/62 (14%), Positives = 24/62 (38%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           ++  ++  A  +L ++ + +A E + +      F G + +      +      KY +A  
Sbjct: 497 WEDVLFPIADFYLSKERWDEAIEIYEELETIGGFEGESAEYYQKFGYALQKRKKYAEAIQ 556

Query: 116 LG 117
             
Sbjct: 557 AY 558


>gi|257062263|ref|YP_003142321.1| TPR repeat-containing protein [Cyanothece sp. PCC 8802]
 gi|256592523|gb|ACV03373.1| TPR repeat-containing protein [Cyanothece sp. PCC 8802]
          Length = 279

 Score = 38.6 bits (89), Expect = 0.99,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 52/133 (39%), Gaps = 16/133 (12%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           +D         +Y +  + + + + K  N+ KA E F +  ++ P    A  +       
Sbjct: 114 KDFEKAIKIKPKYAQAFHGQGIAYTKLGNYEKALENFRKAIQNNP--QYAE-AFNGRGIA 170

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
                KY+QA +  ++ I             Y  G++Y Q        Q  ++  ++  +
Sbjct: 171 YIQMEKYRQALNDFDKAIKFNSNYIE---AIYNKGIAYKQ--------QGNSEKAIEAFT 219

Query: 164 RIVERYTNSPYVK 176
           ++++   +S Y++
Sbjct: 220 QVIQI--DSDYLE 230



 Score = 35.5 bits (81), Expect = 9.1,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 41/113 (36%), Gaps = 16/113 (14%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           K++ + +A + F +  +  P    A ++           G Y++A     + I   P+  
Sbjct: 105 KQEKYEEAIKDFEKAIKIKP--KYA-QAFHGQGIAYTKLGNYEKALENFRKAIQNNPQ-- 159

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                +   G++Y QM +         +  L    + ++   NS Y++     
Sbjct: 160 -YAEAFNGRGIAYIQMEK--------YRQALNDFDKAIKF--NSNYIEAIYNK 201


>gi|160886408|ref|ZP_02067411.1| hypothetical protein BACOVA_04419 [Bacteroides ovatus ATCC 8483]
 gi|299146888|ref|ZP_07039956.1| putative TPR domain protein [Bacteroides sp. 3_1_23]
 gi|156108293|gb|EDO10038.1| hypothetical protein BACOVA_04419 [Bacteroides ovatus ATCC 8483]
 gi|298517379|gb|EFI41260.1| putative TPR domain protein [Bacteroides sp. 3_1_23]
          Length = 735

 Score = 38.6 bits (89), Expect = 0.99,   Method: Composition-based stats.
 Identities = 9/62 (14%), Positives = 24/62 (38%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           ++  ++  A  +L ++ + +A E + +      F G + +      +      KY +A  
Sbjct: 498 WEDVLFPIADFYLSKERWDEAIEIYEELETIGGFEGESAEYYQKFGYALQKRKKYAEAIQ 557

Query: 116 LG 117
             
Sbjct: 558 AY 559


>gi|45656229|ref|YP_000315.1| hemolysin [Leptospira interrogans serovar Copenhageni str. Fiocruz
           L1-130]
 gi|45599463|gb|AAS68952.1| hemolysin [Leptospira interrogans serovar Copenhageni str. Fiocruz
           L1-130]
          Length = 378

 Score = 38.6 bits (89), Expect = 0.99,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 39/128 (30%), Gaps = 11/128 (8%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           EKA      + +  A + F +       +    ++L   A    + GK   A       +
Sbjct: 236 EKARQLYVRKQYYGAIDTFKKALDMGVSSKAEEQALFYIAESYEAIGKSDSALQYLNRVL 295

Query: 122 TQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
               +  ++D    +  G  Y +            +          ++Y +SP  + A  
Sbjct: 296 GN--QDGSLDQTALFRKGTIYFKS--------GKYEKAAALFQEATDKYPDSPVGRKASA 345

Query: 181 YVTVGRNQ 188
           +     +Q
Sbjct: 346 WKKESLDQ 353



 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 1/62 (1%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV-SL 252
           +E  R    R +Y  AI  F+  L     ++  E+A+  + E+Y A+   D A + +  +
Sbjct: 235 LEKARQLYVRKQYYGAIDTFKKALDMGVSSKAEEQALFYIAESYEAIGKSDSALQYLNRV 294

Query: 253 IQ 254
           + 
Sbjct: 295 LG 296


>gi|34556854|ref|NP_906669.1| hypothetical protein WS0426 [Wolinella succinogenes DSM 1740]
 gi|34482569|emb|CAE09569.1| hypothetical protein WS0426 [Wolinella succinogenes]
          Length = 494

 Score = 38.6 bits (89), Expect = 0.99,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 22/77 (28%), Gaps = 2/77 (2%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
           +  +Y   + +       Y  A    ++  F +A   + +     P    A         
Sbjct: 345 AETLYRTILQESPSPEAQYNLANTLYRQNRFQEAITLYARIQTKNPDLLHAL--EHNQGN 402

Query: 103 VQYSAGKYQQAASLGEE 119
             Y   +Y+ A    E 
Sbjct: 403 AHYHLKEYRLALEAYER 419


>gi|298482927|ref|ZP_07001109.1| TPR domain-containing protein [Bacteroides sp. D22]
 gi|298270899|gb|EFI12478.1| TPR domain-containing protein [Bacteroides sp. D22]
          Length = 735

 Score = 38.6 bits (89), Expect = 0.99,   Method: Composition-based stats.
 Identities = 9/62 (14%), Positives = 24/62 (38%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           ++  ++  A  +L ++ + +A E + +      F G + +      +      KY +A  
Sbjct: 498 WEDVLFPIADFYLSKERWDEAIEIYEELETIGGFEGESAEYYQKFGYALQKRKKYAEAIQ 557

Query: 116 LG 117
             
Sbjct: 558 AY 559


>gi|259418089|ref|ZP_05742008.1| tetratricopeptide TPR_2 repeat protein [Silicibacter sp. TrichCH4B]
 gi|259346995|gb|EEW58809.1| tetratricopeptide TPR_2 repeat protein [Silicibacter sp. TrichCH4B]
          Length = 281

 Score = 38.6 bits (89), Expect = 0.99,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 46/133 (34%), Gaps = 18/133 (13%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ A+  L+ +N+  A + F      +P + +  K        Q   G  ++A      Y
Sbjct: 162 YKLAMSDLEAENYQAAADRFANFKLAYPGSPLTAKVDFGLGKAQDGLGDTREA---ARSY 218

Query: 121 ITQYPESKN---VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           +  +             + +G +  ++          T      ++ +  R+ N P V  
Sbjct: 219 LAAFTGDTAGAIAPEALFELGAALGRL--------GQTDQACITLAEVAVRFPNDPAVTA 270

Query: 178 ARFYVTVGRNQLA 190
           A       R++LA
Sbjct: 271 AEAE----RSKLA 279


>gi|254429722|ref|ZP_05043429.1| LemA family [Alcanivorax sp. DG881]
 gi|196195891|gb|EDX90850.1| LemA family [Alcanivorax sp. DG881]
          Length = 209

 Score = 38.6 bits (89), Expect = 0.99,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 34/86 (39%), Gaps = 11/86 (12%)

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE--VEI 196
           ++  + ++     QR     LQ +  + ERY +      A       ++QL   E  + +
Sbjct: 100 LNNPEKLKQFEQAQRQLGSALQRLMVVAERYPD----LKANQNFLALQSQLEGTENRISV 155

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSD 222
                 R +Y+AA+ ++   +  +  
Sbjct: 156 A-----RRDYIAAVQQYNTEIRTFPG 176


>gi|91216014|ref|ZP_01252983.1| polyprenyl synthetase [Psychroflexus torquis ATCC 700755]
 gi|91185991|gb|EAS72365.1| polyprenyl synthetase [Psychroflexus torquis ATCC 700755]
          Length = 325

 Score = 38.6 bits (89), Expect = 0.99,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 9/62 (14%)

Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
           ++ +DYV  + G+SYA         Q   K      S I++RY +S Y    +  +    
Sbjct: 271 NEVIDYVKSVGGLSYA---------QIKMKEFQSEASEILQRYPDSTYKASLQLMIDYVI 321

Query: 187 NQ 188
           ++
Sbjct: 322 DR 323


>gi|86606356|ref|YP_475119.1| TPR repeat-containing protein [Synechococcus sp. JA-3-3Ab]
 gi|86554898|gb|ABC99856.1| tetratricopeptide repeat protein [Synechococcus sp. JA-3-3Ab]
          Length = 312

 Score = 38.6 bits (89), Expect = 0.99,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 29/87 (33%), Gaps = 10/87 (11%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y   V +L++ ++  A E   +     P +  AR              ++ +A    E+
Sbjct: 131 LYSLGVAYLRQGSYFAAAETLERAVALQPDSPNAR---FQLGNAYLMLDQWDRARQEYEK 187

Query: 120 YITQYPESKNVDY--VYYLVGMSYAQM 144
            +   P      Y      +G+   + 
Sbjct: 188 TLELDP-----AYWPAMNNIGLVDYEQ 209



 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 36/111 (32%), Gaps = 14/111 (12%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y    ++L+  N ++A +   +     P  G     L          G Y  AA   E 
Sbjct: 97  LYVLGNVYLELGNSAQAVQVLQRARALAPQDG---DVLYSLGVAYLRQGSYFAAAETLER 153

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
            +   P+S N     + +G +Y  + +             Q   + +E   
Sbjct: 154 AVALQPDSPN---ARFQLGNAYLMLDQ--------WDRARQEYEKTLELDP 193


>gi|116620924|ref|YP_823080.1| hypothetical protein Acid_1805 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116224086|gb|ABJ82795.1| hypothetical protein Acid_1805 [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 268

 Score = 38.6 bits (89), Expect = 0.99,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 68/238 (28%), Gaps = 24/238 (10%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLK--EQNFSKA 76
           + +  +T   ++    L     Q+            + + E    A+  L+  + N    
Sbjct: 1   MKRIIITGILALC-AGLTCLMAQAPAGAPKGPAPKSKAEME----ALQALQAAQGNPDAT 55

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
                     F        +L M A         +      E  +   P++        +
Sbjct: 56  IAACENLITKFADTDFKGIALFMEADAYERKNDPEHMVIFAERALDANPQNFQ---AVLM 112

Query: 137 VGMSYAQMIRDVPYDQRA-TKLMLQYMSRIVER-----YTNSPYVKGARFYVTVGRNQLA 190
           +   Y+   R+   D+        +Y  ++++        N         +  V ++  A
Sbjct: 113 LAKYYSTHTRENDLDREEKLGKEEKYAHQVIDMMKDAPKPNPQLTDE--QWSDVKKDIAA 170

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA--MARLVEAYVALALMDEA 246
                IG   L R +Y  A   F+  +    D     E   M R   A  A    DEA
Sbjct: 171 EAYNAIGLGNLTRKKYDVAAGNFKQAM----DTNSRPEPAYMVRYASALQAGGKNDEA 224


>gi|330928044|ref|XP_003302103.1| hypothetical protein PTT_13802 [Pyrenophora teres f. teres 0-1]
 gi|311322715|gb|EFQ89794.1| hypothetical protein PTT_13802 [Pyrenophora teres f. teres 0-1]
          Length = 877

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 47/139 (33%), Gaps = 22/139 (15%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108
           +D    +  Y     ++ +Q + KAYE + Q        P              + Y   
Sbjct: 294 SDQTDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIN 347

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +Y+ A       I   P   N+  V+Y +G +  +   +   D       L    R  + 
Sbjct: 348 QYRDALDAYSRAIRLNP---NISEVWYDLG-TLYESCNNQTAD------ALDAYQRAADL 397

Query: 169 YTNSPYVKGARFYVTVGRN 187
             ++ ++   +  + + +N
Sbjct: 398 DPSNIHI---KARLQLLQN 413


>gi|306838683|ref|ZP_07471519.1| TPR domain-containing protein [Brucella sp. NF 2653]
 gi|306406326|gb|EFM62569.1| TPR domain-containing protein [Brucella sp. NF 2653]
          Length = 283

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 48/160 (30%), Gaps = 33/160 (20%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQ--------------REVYE-KAVLFL 68
           L I  ++    + G +  +S    +D                       E Y  +   + 
Sbjct: 20  LIIAVALLALTVAGCQSTNSTLSTVDRAQGSSENISSLTSVIQSNPRDPEGYNVRGSAYG 79

Query: 69  KEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
           K   + +A   F+Q     P  +   A ++L+      Y  G   +A       I   P+
Sbjct: 80  KAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR----YM-GDNNKAVQDYSRAIQLNPQ 134

Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
               D  Y   G  Y Q  R    DQ      L   ++ +
Sbjct: 135 ---YDAAYIGRGNVYRQAGR---LDQ-----ALNNFNQAI 163


>gi|253996449|ref|YP_003048513.1| type II and III secretion system protein [Methylotenera mobilis
           JLW8]
 gi|253983128|gb|ACT47986.1| type II and III secretion system protein [Methylotenera mobilis
           JLW8]
          Length = 659

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 40/134 (29%), Gaps = 20/134 (14%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
            + K    +          G+    S+              + YE A L +   +     
Sbjct: 2   NIKKLTSYLVVMTFATSCTGFNHLKSKSDD---------DNQTYEAARLLINSGDVDAGI 52

Query: 78  EYFNQCSRDFPFAG------VARK-----SLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
           +   Q    +P           ++     +LL  A  Q   G +  A S  ++ +   P 
Sbjct: 53  DKLKQLVTLYPDNPQYRSMLKVQQELQLSTLLKLADNQAQQGLFTDAESNYKKVLMLDPN 112

Query: 127 SKNVDYVYYLVGMS 140
           ++      Y +G++
Sbjct: 113 NQRAQEGSYRLGLA 126


>gi|238025842|ref|YP_002910073.1| TPR domain-containing protein [Burkholderia glumae BGR1]
 gi|237875036|gb|ACR27369.1| TPR domain protein [Burkholderia glumae BGR1]
          Length = 790

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 20/54 (37%), Gaps = 3/54 (5%)

Query: 66  LFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
               +  ++ A ++    +  +P +  A KSL       +  G+Y  AA     
Sbjct: 187 ALYNKGRYADAVKHARTMTERYPGSAYAWKSLSN---ALHKHGEYLAAAEPLAR 237


>gi|254166562|ref|ZP_04873416.1| Tetratricopeptide repeat family [Aciduliprofundum boonei T469]
 gi|289596148|ref|YP_003482844.1| TPR repeat-containing protein [Aciduliprofundum boonei T469]
 gi|197624172|gb|EDY36733.1| Tetratricopeptide repeat family [Aciduliprofundum boonei T469]
 gi|289533935|gb|ADD08282.1| TPR repeat-containing protein [Aciduliprofundum boonei T469]
          Length = 1297

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 60/190 (31%), Gaps = 35/190 (18%)

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
           L  A   Y   +Y  A    E  +     +++ D  + L+GM Y ++           + 
Sbjct: 486 LDLARAYYIVSRYDDAKKTLERGLKL---NEDSDEGWNLLGMIYYKL--------GDLEN 534

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY--------------LKR 203
                 +      N+         +     +L      +  YY               ++
Sbjct: 535 ARYSFEKASTINPNNKKYW---KNLAWVMEKLGKYNEAV-EYYEKALKLDPNDMRLWYEK 590

Query: 204 GEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEAREVV-SLIQERYP 258
           G  +  I R++  + ++  A        +A+    ++ + L   DEA ++  SLI+    
Sbjct: 591 GICLKKIKRYEEAIKSFDSALKLNSEFTKALYEKGDSLIKLGNYDEALKIFTSLIKLERG 650

Query: 259 QGYW-ARYVE 267
              +  +   
Sbjct: 651 NSEYIYKRAY 660


>gi|58583105|ref|YP_202121.1| hypothetical protein XOO3482 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|58427699|gb|AAW76736.1| unknown protein [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 204

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 32/108 (29%), Gaps = 13/108 (12%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           +F  + +  LVG      +     S            +A   +      +A + F    R
Sbjct: 14  MFALVLLSALVGCASAPKKAPPPSSFDATM------SRAEAEVTNGGPEQALKTFEDAGR 67

Query: 86  DFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
             P       R + L     Q+    Y +A    +E + + P     D
Sbjct: 68  ADPTRKEPWVRIAQL-----QFDRANYARAIVAAQEVLQRDPNDLVAD 110


>gi|19115532|ref|NP_594620.1| RNA polymerase II associated Paf1 complex subunit Tpr1
           [Schizosaccharomyces pombe 972h-]
 gi|26400735|sp|O42668|TPR1_SCHPO RecName: Full=Tetratricopeptide repeat protein 1
 gi|2664248|emb|CAA15833.1| RNA polymerase II associated Paf1 complex subunit Tpr1
           [Schizosaccharomyces pombe]
          Length = 1039

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 57/188 (30%), Gaps = 27/188 (14%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           KA +   + N+  A + + +     P         +      ++      A S       
Sbjct: 181 KARILYAKGNYRSALKLYQRALVSNP--QFKPDPRIGIGLCFWNLDMKTDALSAWTRVQQ 238

Query: 123 QYPESKNVD-YVYYLVGMSYAQM-IRDVPYDQ--RATKLMLQYMSRIVERYTNSPYVKGA 178
             P++  VD Y    +G+ Y  +  ++V  D   +     LQ++ R  +   N P     
Sbjct: 239 LDPKNTVVDTY----IGLYYYDLAFQNVNNDSFVQNYGKALQHIQRAFKTRNNDPVASSI 294

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
                               Y   +  Y   I   + V+ N   +    +    +  AY 
Sbjct: 295 LER-----------------YVYSKKNYEGCIKLAENVIQNSFSSSLIADGYYWMGRAYH 337

Query: 239 ALALMDEA 246
            +   ++A
Sbjct: 338 QMGNNEKA 345


>gi|189347525|ref|YP_001944054.1| hypothetical protein Clim_2046 [Chlorobium limicola DSM 245]
 gi|189341672|gb|ACD91075.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium limicola DSM
           245]
          Length = 208

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 38/116 (32%), Gaps = 14/116 (12%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D   ++ +         + N+ +A  YF +     P   +          V     +Y +
Sbjct: 82  DPEKEQLLAALGAASFNQGNYREALVYFTKYQALAPDDSLRN---YDIGNVLLQMREYDK 138

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           A +     I     S + D  YY +G+ YA+  R             +    +V++
Sbjct: 139 AIAAYRRAIE---NSVSFDEAYYNLGVCYARTGR--------AAEAEEIYELLVKK 183


>gi|85101921|ref|XP_961236.1| mitochondrial precursor protein import receptor tom70 [Neurospora
           crassa OR74A]
 gi|11595524|emb|CAC18318.1| mitochondrial precursor protein import receptor tom70 [Neurospora
           crassa]
 gi|28922778|gb|EAA32000.1| mitochondrial precursor protein import receptor tom70 [Neurospora
           crassa OR74A]
          Length = 624

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 45/134 (33%), Gaps = 20/134 (14%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGV 92
           +G   ++  D       +       Y +A L   +  F++A + + +      DF F+  
Sbjct: 387 LGHPDKAEEDFNKAIEQNAEDPDIYYHRAQLHFIKGEFAEAAKDYQKSIDLDSDFIFSH- 445

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
                +     QY  G    + +     +  + ++ +V Y YY           ++  DQ
Sbjct: 446 -----IQLGVTQYKMGSIASSMATFRRCMKNFDQTPDV-YNYY----------GELLLDQ 489

Query: 153 RATKLMLQYMSRIV 166
              +  ++     +
Sbjct: 490 NKFQEAIEKFDTAI 503


>gi|320156059|ref|YP_004188438.1| flp pilus assembly protein TadD, contains TPR repeat [Vibrio
           vulnificus MO6-24/O]
 gi|319931371|gb|ADV86235.1| flp pilus assembly protein TadD, contains TPR repeat [Vibrio
           vulnificus MO6-24/O]
          Length = 246

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 50/177 (28%), Gaps = 37/177 (20%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           KFA  +  S+    LVG    +S+               +   A    +   +  A   +
Sbjct: 2   KFASKLILSVVSILLVGCAAPASQ----------PSAESLNSLADTAFEYARYDSAKSKY 51

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE-------------YI----TQ 123
            Q    +P    AR   LM A +     +   A S  ++             +I      
Sbjct: 52  QQVLDVYPEQPHAR---LMLARIDLLQDRPHAAQSQLQQLLTENADNAAEAAFILGRYQL 108

Query: 124 YPESKNVDYVYYLVGMSYAQMIRD------VPYD-QRATKLMLQYMSRIVERYTNSP 173
                     Y   G+   +          +  D Q+ T    Q+  R +E   +S 
Sbjct: 109 NQGDALSASNYLQQGLVLDEQHAGLHNLLAIALDEQQRTAQAKQHFLRAMELEPDSK 165


>gi|317418580|emb|CBN80618.1| Prolyl 3-hydroxylase 1 [Dicentrarchus labrax]
          Length = 886

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/155 (12%), Positives = 45/155 (29%), Gaps = 34/155 (21%)

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             +   K  +A +    +    P+   +        + Y +M+  V           +  
Sbjct: 151 AYFKINKLDKAVAAAHTFYQANPDHMEM-----RQNLEYYRMMAGVK---------EEDF 196

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
             +                    R  +A  E  +G+ Y     +  A   F++ +  Y  
Sbjct: 197 KDL------------------EARTHMA--EFLLGKSYYSDDSFGLAAKHFEVAVDEYFT 236

Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           A+    A+      Y     M+ + ++   + + Y
Sbjct: 237 ADKECRALCEGAYNYDGYNYMEYSADLFQAMTDHY 271


>gi|262164787|ref|ZP_06032525.1| TPR domain protein in aerotolerance operon [Vibrio mimicus VM223]
 gi|262027167|gb|EEY45834.1| TPR domain protein in aerotolerance operon [Vibrio mimicus VM223]
          Length = 620

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 39/123 (31%), Gaps = 7/123 (5%)

Query: 14  AWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF 73
           A  +   + AL     +    L      +S  +  D      ++ + Y +A     +  +
Sbjct: 312 AALFMFRRGALFTVVLLIGASLPNQHAWASPWLNQDQQAMRDFESKQYSQAAEGFSDPRW 371

Query: 74  SKAYEYFNQCSRDFPFAGVAR------KSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
             A  Y N           ++       +    A     AG   +A +L E+ + + P  
Sbjct: 372 QGAARY-NAGDYQGAIDAYSQVDNPDLDTQYNLANAYAQAGDLSKARNLYEQVLEKEPNH 430

Query: 128 KNV 130
           ++ 
Sbjct: 431 QDA 433


>gi|260173462|ref|ZP_05759874.1| hypothetical protein BacD2_16440 [Bacteroides sp. D2]
 gi|315921732|ref|ZP_07917972.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313695607|gb|EFS32442.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 735

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 9/62 (14%), Positives = 24/62 (38%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           ++  ++  A  +L ++ + +A E + +      F G + +      +      KY +A  
Sbjct: 498 WEDVLFPIADFYLSKERWDEAIEIYEELETIGGFEGESAEYYQKFGYALQKRKKYAEAIQ 557

Query: 116 LG 117
             
Sbjct: 558 AY 559


>gi|255321355|ref|ZP_05362515.1| tetratricopeptide repeat domain protein [Campylobacter showae
           RM3277]
 gi|255301508|gb|EET80765.1| tetratricopeptide repeat domain protein [Campylobacter showae
           RM3277]
          Length = 790

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 30/68 (44%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
           V+D  Y   +Y     +L+++  S A    +    + P +   + + L  A   Y++G+ 
Sbjct: 250 VSDENYPEVLYLVTKAYLRQELVSDANYTLDILKSEHPNSNFTKLAELEFADKLYASGRQ 309

Query: 111 QQAASLGE 118
            +A  + E
Sbjct: 310 DEAVRMYE 317


>gi|241829150|ref|XP_002414745.1| conserved hypothetical protein [Ixodes scapularis]
 gi|215508957|gb|EEC18410.1| conserved hypothetical protein [Ixodes scapularis]
          Length = 1100

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 54/145 (37%), Gaps = 22/145 (15%)

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +  A KS L    + + AG + +A +   + +   P  +NV+      G  +A       
Sbjct: 321 SKWAYKS-LKDGVMHFKAGNHSEAFACLNKALQIDP--ENVE-ALVARGALFANN----- 371

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
                 +  L+   + +    N P    AR Y++     L       G+YY +RG+   A
Sbjct: 372 ---SNLRRALEDFEQALTLNPNHP---NARKYMSETLVAL-------GKYYEERGDLEGA 418

Query: 210 IPRFQLVLANYSDAEHAEEAMARLV 234
           +  ++  +        A EA+  + 
Sbjct: 419 VKTYKKAVKVNLSNSDAREALIAME 443


>gi|189200310|ref|XP_001936492.1| TPR repeat-containing protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187983591|gb|EDU49079.1| TPR repeat-containing protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 870

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 47/139 (33%), Gaps = 22/139 (15%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108
           +D    +  Y     ++ +Q + KAYE + Q        P              + Y   
Sbjct: 294 SDQTDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIN 347

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +Y+ A       I   P   N+  V+Y +G +  +   +   D       L    R  + 
Sbjct: 348 QYRDALDAYSRAIRLNP---NISEVWYDLG-TLYESCNNQTAD------ALDAYQRAADL 397

Query: 169 YTNSPYVKGARFYVTVGRN 187
             ++ ++   +  + + +N
Sbjct: 398 DPSNIHI---KARLQLLQN 413


>gi|197117091|ref|YP_002137518.1| LysM domain-containing protein [Geobacter bemidjiensis Bem]
 gi|197086451|gb|ACH37722.1| LysM domain protein [Geobacter bemidjiensis Bem]
          Length = 200

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 23/53 (43%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
                + E + +A     ++N+ +A E F+   + FP +G A  + L  A   
Sbjct: 142 PAQAGETESFHQARKAYLDRNYQRALELFSGFLKKFPRSGYAADASLYRADCY 194



 Score = 36.6 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 17/50 (34%), Gaps = 1/50 (2%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
               R    D R  +  L+  S  ++++  S Y   A  Y       L+ 
Sbjct: 151 FHQARKAYLD-RNYQRALELFSGFLKKFPRSGYAADASLYRADCYLHLSG 199


>gi|83594427|ref|YP_428179.1| hypothetical protein Rru_A3097 [Rhodospirillum rubrum ATCC 11170]
 gi|83577341|gb|ABC23892.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170]
          Length = 933

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 42/132 (31%), Gaps = 8/132 (6%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
            + G +  +   +   +         +  +A   L   + + A   F+Q +   P   + 
Sbjct: 181 TMAGHQDAARALLARAAAAAPDDVDVLVAQADTALSANDPAAAEGLFSQAAARLPLNPLI 240

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA--QMIRDVPYD 151
           R   L  A  Q  AGK  +A       +   P      +  YL G++      +     D
Sbjct: 241 R---LSLAQAQIEAGKNAEARQTLNTVLADIPAHP---WALYLRGLTAYRTNDMTAADKD 294

Query: 152 QRATKLMLQYMS 163
             A   + + + 
Sbjct: 295 LTAALALAKTLR 306


>gi|237756528|ref|ZP_04585056.1| tol-pal system protein YbgF [Sulfurihydrogenibium yellowstonense
           SS-5]
 gi|237691314|gb|EEP60394.1| tol-pal system protein YbgF [Sulfurihydrogenibium yellowstonense
           SS-5]
          Length = 136

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 57/144 (39%), Gaps = 27/144 (18%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           +  +++Y+ A+      N  ++ + F +  + +P + +   ++  +    Y+  KY+ A 
Sbjct: 8   QNDKQLYQYALDLYFRGNIEESRKAFTEFLKKYPDSDLYGNAIFWAGQTFYAEKKYKDAI 67

Query: 115 SLGEEYITQ-----------YPES-KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
            + E ++ +           YP++   + Y Y  +G                 +   QY+
Sbjct: 68  DIWEIFLKKCDEGKIKKCIKYPDTMLKLGYAYIELG---------------NVEKGKQYL 112

Query: 163 SRIVERYTNSPYVKGARFYVTVGR 186
             ++++Y +S     A+  + V  
Sbjct: 113 QDLIKKYPDSEPASFAKKKLEVLN 136



 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 47/131 (35%), Gaps = 31/131 (23%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           +   +   +  +  +++Y +S     A                  G+ +    +Y  AI 
Sbjct: 23  RGNIEESRKAFTEFLKKYPDSDLYGNAI--------------FWAGQTFYAEKKYKDAID 68

Query: 212 RFQLVLAN-----------YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            +++ L             Y D       M +L  AY+ L  +++ ++ +  + ++YP  
Sbjct: 69  IWEIFLKKCDEGKIKKCIKYPDT------MLKLGYAYIELGNVEKGKQYLQDLIKKYPDS 122

Query: 261 YWARYVETLVK 271
             A + +  ++
Sbjct: 123 EPASFAKKKLE 133


>gi|224534323|ref|ZP_03674901.1| surface-located membrane protein 1 [Borrelia spielmanii A14S]
 gi|224514425|gb|EEF84741.1| surface-located membrane protein 1 [Borrelia spielmanii A14S]
          Length = 1012

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 3/60 (5%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y KA + LK +N+  A   +N      P       + +  A     +G   QA S  E+
Sbjct: 841 LYLKASINLKSENYQNAISLYNLVIEKNPEN---TSAYINLAKAYEKSGNKTQAISTLEK 897



 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 61/182 (33%), Gaps = 34/182 (18%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           ++   +  ++   K ++A  +  + I   P  +  +Y  YL      +            
Sbjct: 806 AIYNLSIAKFENNKLKEALEIINKAINLNP--EKSEY-LYLKASINLKS--------ENY 854

Query: 156 KLMLQYMSRIVERYTN--SPYVKGARFYVTVGRNQLA----AKEV---------EIGRYY 200
           +  +   + ++E+     S Y+  A+ Y   G    A     K +          +G  Y
Sbjct: 855 QNAISLYNLVIEKNPENTSAYINLAKAYEKSGNKTQAISTLEKIMNKNNKLALNNLGILY 914

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS---LIQERY 257
            K   Y  AI  F+  + N        EA   L    + +     A++++     ++   
Sbjct: 915 KKEKNYQKAIEIFEKAIIN-----SDIEAKYNLATTLIEINDNTRAKDLLKEYTKLKPNN 969

Query: 258 PQ 259
           P+
Sbjct: 970 PE 971



 Score = 35.9 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 61/210 (29%), Gaps = 36/210 (17%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE-- 119
            K +  +      KA E F +          A +  +      Y  G  ++     ++  
Sbjct: 707 NKGIALMMLNKNKKAIESFEK----------AIQIDINYDTAYYQKGIAEEKNGNIQQAF 756

Query: 120 --YITQYPESKNVDYVY-----------YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
             +   Y  +K  +Y             +  G +Y     D           +   +  +
Sbjct: 757 TSFKNAYNLNKKTNYALKAGIVSNNLGNFKKGEAYLSFFNDNVKKPNE----IAIYNLSI 812

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEI---GRYYLKRGEYVAAIPRFQLVLANYSDA 223
            ++ N+  +K A   +    N    K   +       LK   Y  AI  + LV+    + 
Sbjct: 813 AKFENNK-LKEALEIINKAINLNPEKSEYLYLKASINLKSENYQNAISLYNLVIEKNPEN 871

Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLI 253
             A      L +AY       +A   +  I
Sbjct: 872 TSAY---INLAKAYEKSGNKTQAISTLEKI 898



 Score = 35.5 bits (81), Expect = 8.5,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 36/118 (30%), Gaps = 31/118 (26%)

Query: 69   KEQNFSKAYEYFNQ------CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
            KE+N+ KA E F +          +             A          +A  L +EY  
Sbjct: 916  KEKNYQKAIEIFEKAIINSDIEAKY-----------NLATTLIEINDNTRAKDLLKEYTK 964

Query: 123  QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
              P +       + +G+       +   DQ         +  +++++ N    +  + 
Sbjct: 965  LKPNNPE---ALHALGIIEYNENNN---DQT--------LRELIKKFPNYKKNENIKK 1008


>gi|253701371|ref|YP_003022560.1| restriction endonuclease [Geobacter sp. M21]
 gi|251776221|gb|ACT18802.1| restriction endonuclease [Geobacter sp. M21]
          Length = 520

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 18/152 (11%), Positives = 50/152 (32%), Gaps = 23/152 (15%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
                 +++ ++  A  +  +     P +    ++L+  +       +Y+++    ++ I
Sbjct: 7   ADGNRCMRQSDYGAAVRHLEKAVALDPRS---LEALMNLSVAYRKMCEYEKSIDAIKKAI 63

Query: 122 TQYPESKNVDYVYYLV-------------GMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           T         Y  Y +               S  +      YD R   ++   ++   + 
Sbjct: 64  TLN----EEQYALYEILATTCMSTENYCEAASAFEKALQGDYDPREASVLHARLAVCYQN 119

Query: 169 YTNSPYVKGARFY-VTVGRNQLAAKEVEIGRY 199
             +S   + A    + + R+ L   E+   R+
Sbjct: 120 SGDSNSTRTALKRSLQLHRSTL--HELYSYRF 149


>gi|163758851|ref|ZP_02165938.1| hypothetical protein HPDFL43_15547 [Hoeflea phototrophica DFL-43]
 gi|162284141|gb|EDQ34425.1| hypothetical protein HPDFL43_15547 [Hoeflea phototrophica DFL-43]
          Length = 203

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 48/130 (36%), Gaps = 21/130 (16%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           A   + ++  S A +  +Q     P FA    R++ L      Y+ G + ++ +     +
Sbjct: 90  ADKAMADKKNSLALDLLDQVVVLMPDFAEGWNRRATL-----HYAMGNHSKSMADINRVL 144

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
           +  P          + GM+    I D         L L+   +++E Y  +     A+  
Sbjct: 145 SLEPRHFGA-----MAGMA---AILDAS---GNDALALRAWEQMLEVYPANK---QAQTK 190

Query: 182 VTVGRNQLAA 191
           V    ++LA 
Sbjct: 191 VGELADKLAG 200


>gi|156044402|ref|XP_001588757.1| hypothetical protein SS1G_10304 [Sclerotinia sclerotiorum 1980]
 gi|154694693|gb|EDN94431.1| hypothetical protein SS1G_10304 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 1043

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 44/141 (31%), Gaps = 28/141 (19%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108
           +D    +  Y     ++ +Q + KAYE + Q        P              + Y   
Sbjct: 290 SDQSDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIN 343

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSY---AQMIRDVPYDQRATKLMLQYMSRI 165
           +Y+ A       I   P    +  V+Y +G  Y      I D           L    R 
Sbjct: 344 QYRDALDAYSRAIRLNP---YISEVWYDLGTLYESCNNQIND----------ALDAYQRA 390

Query: 166 VERYTNSPYVKGARFYVTVGR 186
            E   N+ ++   +  + + R
Sbjct: 391 AELDPNNVHI---KARLQLLR 408


>gi|219847042|ref|YP_002461475.1| NHL repeat-containing protein [Chloroflexus aggregans DSM 9485]
 gi|219541301|gb|ACL23039.1| NHL repeat-containing protein [Chloroflexus aggregans DSM 9485]
          Length = 680

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 20/55 (36%), Gaps = 3/55 (5%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +A+       + +A  YF Q    +  + +   +    A   + AG Y  A +  
Sbjct: 356 RAMRLYLAGFYREAKPYFEQVLN-YNGSFI--MAYQGLADAYFKAGDYPAALAAY 407


>gi|94969110|ref|YP_591158.1| hypothetical protein Acid345_2083 [Candidatus Koribacter versatilis
           Ellin345]
 gi|94551160|gb|ABF41084.1| hypothetical protein Acid345_2083 [Candidatus Koribacter versatilis
           Ellin345]
          Length = 318

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 20/144 (13%), Positives = 44/144 (30%), Gaps = 29/144 (20%)

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML----------QY 161
            A  L       +P+S       Y         +       R +              QY
Sbjct: 131 DARRLYYRVYDLFPQSPLAGEALY-RAADIEWQVDKADTSSRPSSKAADPNLRAQIDDQY 189

Query: 162 MSRIVERYTNSPYVKGARFYVTVGR-----NQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
           M  +++++ ++ + + A F++   +     + L+   ++    Y    +Y          
Sbjct: 190 MKLVMKKFPHTKWSEMAAFHLIDNKICGEWDGLSKCPLKEAEIY---EKYA--------- 237

Query: 217 LANYSDAEHAEEAMARLVEAYVAL 240
              Y ++    EA+      Y AL
Sbjct: 238 -EEYPNSPDTPEALYNAAYRYGAL 260


>gi|3028|emb|CAA37767.1| mitochondrial outer membrane 72K protein [Neurospora crassa]
 gi|227471|prf||1704253A ADP/ATP carrier receptor
          Length = 619

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 45/134 (33%), Gaps = 20/134 (14%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGV 92
           +G   ++  D       +       Y +A L   +  F++A + + +      DF F+  
Sbjct: 382 LGHPDKAEEDFNKAIEQNAEDPDIYYHRAQLHFIKGEFAEAAKDYQKSIDLDSDFIFSH- 440

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
                +     QY  G    + +     +  + ++ +V Y YY           ++  DQ
Sbjct: 441 -----IQLGVTQYKMGSIASSMATFRRCMKNFDQTPDV-YNYY----------GELLLDQ 484

Query: 153 RATKLMLQYMSRIV 166
              +  ++     +
Sbjct: 485 NKFQEAIEKFDTAI 498


>gi|67477439|sp|P23231|TOM70_NEUCR RecName: Full=Mitochondrial import receptor subunit tom-70;
           AltName: Full=72 kDa mitochondrial outer membrane
           protein; AltName: Full=Mitochondrial import receptor for
           the ADP/ATP carrier; AltName: Full=Mitochondrial
           precursor proteins import receptor; AltName:
           Full=Translocase of outer membrane tom-70
 gi|4530327|gb|AAD21979.1| mitochondrial precursor protein import receptor tom70 [Neurospora
           crassa]
          Length = 624

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 45/134 (33%), Gaps = 20/134 (14%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGV 92
           +G   ++  D       +       Y +A L   +  F++A + + +      DF F+  
Sbjct: 387 LGHPDKAEEDFNKAIEQNAEDPDIYYHRAQLHFIKGEFAEAAKDYQKSIDLDSDFIFSH- 445

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
                +     QY  G    + +     +  + ++ +V Y YY           ++  DQ
Sbjct: 446 -----IQLGVTQYKMGSIASSMATFRRCMKNFDQTPDV-YNYY----------GELLLDQ 489

Query: 153 RATKLMLQYMSRIV 166
              +  ++     +
Sbjct: 490 NKFQEAIEKFDTAI 503


>gi|332243826|ref|XP_003271073.1| PREDICTED: lysine-specific demethylase 6A [Nomascus leucogenys]
          Length = 1401

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A +  ++  
Sbjct: 107 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 153

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198
             ++    +    K     + +               QLA              +  I  
Sbjct: 154 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 213

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 214 LYETQRKYHSAKEAYEQLLQT 234


>gi|315187027|gb|EFU20784.1| Tetratricopeptide TPR_1 repeat-containing protein [Spirochaeta
           thermophila DSM 6578]
          Length = 365

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 30/88 (34%), Gaps = 6/88 (6%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++ ++    LK+    +A   F +          A   L+         G++ +A S   
Sbjct: 15  QLSQEGYALLKQDRPEEAIIRFEKILELDRHNNYA---LVGLGDAYRKKGEHDRAVSYYR 71

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIR 146
           E +  YP +    Y  + +   Y    R
Sbjct: 72  ECLRYYPGNN---YALFGLADCYKAQER 96


>gi|70672796|gb|AAZ06657.1| ubiquitously transcribed tetratricopeptide repeat protein X-linked,
           transcript variant 3 [Homo sapiens]
          Length = 1356

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A +  ++  
Sbjct: 107 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 153

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198
             ++    +    K     + +               QLA              +  I  
Sbjct: 154 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 213

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 214 LYETQRKYHSAKEAYEQLLQT 234


>gi|301787675|ref|XP_002929254.1| PREDICTED: lysine-specific demethylase 6A-like, partial [Ailuropoda
           melanoleuca]
          Length = 1359

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A +  ++  
Sbjct: 65  EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 111

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198
             ++    +    K     + +               QLA              +  I  
Sbjct: 112 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 171

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 172 LYETQRKYHSAKEAYEQLLQT 192


>gi|297709805|ref|XP_002831609.1| PREDICTED: lysine-specific demethylase 6A-like [Pongo abelii]
          Length = 1413

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A +  ++  
Sbjct: 107 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 153

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198
             ++    +    K     + +               QLA              +  I  
Sbjct: 154 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 213

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 214 LYETQRKYHSAKEAYEQLLQT 234


>gi|330864769|ref|NP_001193504.1| lysine-specific demethylase 6A [Bos taurus]
          Length = 1453

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A +  ++  
Sbjct: 107 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 153

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198
             ++    +    K     + +               QLA              +  I  
Sbjct: 154 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 213

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 214 LYETQRKYHSAKEAYEQLLQT 234


>gi|281354646|gb|EFB30230.1| hypothetical protein PANDA_019377 [Ailuropoda melanoleuca]
          Length = 1317

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A +  ++  
Sbjct: 32  EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 78

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198
             ++    +    K     + +               QLA              +  I  
Sbjct: 79  QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 138

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 139 LYETQRKYHSAKEAYEQLLQT 159


>gi|238788117|ref|ZP_04631912.1| TPR repeat-containing protein yfgC [Yersinia frederiksenii ATCC
           33641]
 gi|238723704|gb|EEQ15349.1| TPR repeat-containing protein yfgC [Yersinia frederiksenii ATCC
           33641]
          Length = 483

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/139 (13%), Positives = 39/139 (28%), Gaps = 35/139 (25%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV---YEKAVLFLKEQNFSKAYEYFNQ 82
           +F  + +  + G    S     L++++    + ++   Y +A+L+ + + + +A      
Sbjct: 269 LFAKVRILGMYGSTENSLTPDLLETLSKGTTREQLAAKYGQAILWYQAKKYDEARNQLQP 328

Query: 83  CSRDFPFAGV---------------------------ARK-----SLLMSAFVQYSAGKY 110
                P                               A+K       L  A      G+ 
Sbjct: 329 LLTQQPGNIWFLDLMTDIDLGQNKPAQAIERLQKAIAAQKDEQPVLQLNLANAYVQGGQP 388

Query: 111 QQAASLGEEYITQYPESKN 129
             A  L   Y    P   N
Sbjct: 389 AAAIKLLNRYTFSNPNDPN 407


>gi|227540213|ref|ZP_03970262.1| phosphoglycerate mutase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227239937|gb|EEI89952.1| phosphoglycerate mutase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 524

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 16/88 (18%)

Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS--PYVKGARFYVTVGRNQLAAKE 193
           L G+  A     +  DQ    + +       +   NS   YVK  + Y+T     LA+  
Sbjct: 144 LKGLCDAAQHAGLTSDQ----VFIHAFLDGRDTDPNSGIGYVKDLQDYLTHSAGTLAS-- 197

Query: 194 VEIGRYY-LKRGEYVAAIPRFQLVLANY 220
             IGRYY + R        R++ V   Y
Sbjct: 198 -AIGRYYAMDRD------NRWERVKETY 218


>gi|219519947|gb|AAI43279.1| UTX protein [Homo sapiens]
          Length = 1356

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A +  ++  
Sbjct: 107 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 153

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198
             ++    +    K     + +               QLA              +  I  
Sbjct: 154 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 213

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 214 LYETQRKYHSAKEAYEQLLQT 234


>gi|219519945|gb|AAI43278.1| UTX protein [Homo sapiens]
          Length = 1453

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A +  ++  
Sbjct: 107 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 153

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198
             ++    +    K     + +               QLA              +  I  
Sbjct: 154 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 213

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 214 LYETQRKYHSAKEAYEQLLQT 234


>gi|219517767|gb|AAI43273.1| UTX protein [Homo sapiens]
          Length = 1408

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A +  ++  
Sbjct: 107 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 153

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198
             ++    +    K     + +               QLA              +  I  
Sbjct: 154 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 213

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 214 LYETQRKYHSAKEAYEQLLQT 234


>gi|194385276|dbj|BAG65015.1| unnamed protein product [Homo sapiens]
          Length = 1015

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A +  ++  
Sbjct: 107 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 153

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198
             ++    +    K     + +               QLA              +  I  
Sbjct: 154 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 213

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 214 LYETQRKYHSAKEAYEQLLQT 234


>gi|194377488|dbj|BAG57692.1| unnamed protein product [Homo sapiens]
          Length = 1030

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A +  ++  
Sbjct: 83  EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 129

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198
             ++    +    K     + +               QLA              +  I  
Sbjct: 130 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 189

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 190 LYETQRKYHSAKEAYEQLLQT 210


>gi|194227838|ref|XP_001492320.2| PREDICTED: similar to ubiquitously transcribed tetratricopeptide
           repeat, X chromosome [Equus caballus]
          Length = 1338

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A +  ++  
Sbjct: 44  EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 90

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198
             ++    +    K     + +               QLA              +  I  
Sbjct: 91  QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 150

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 151 LYETQRKYHSAKEAYEQLLQT 171


>gi|170064978|ref|XP_001867750.1| tetratricopeptide repeat protein 1 [Culex quinquefasciatus]
 gi|167882153|gb|EDS45536.1| tetratricopeptide repeat protein 1 [Culex quinquefasciatus]
          Length = 303

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 44/134 (32%), Gaps = 25/134 (18%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLL--MSAFVQYSAGKYQQ 112
             E+  +     K+  + K+ E +    R  P  F+  A +S+L    A  +        
Sbjct: 126 AEELKAQGNELFKQGEYQKSAEMYTAALRICPVDFS--AERSILYANRAAAKTKLNFKPS 183

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGM----SYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           A     + I   P+        YL  +    +  +    +          L+   +I+E 
Sbjct: 184 AIDDCTKAIEHNPK--------YLKALLRRATLYEEADKLD-------ESLEDFKQILEL 228

Query: 169 YTNSPYVKGARFYV 182
             ++   + A+  +
Sbjct: 229 DPDNAEARAAQARL 242


>gi|148703781|gb|EDL35728.1| ubiquitously transcribed tetratricopeptide repeat gene, X
           chromosome, isoform CRA_b [Mus musculus]
          Length = 1288

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A +  ++  
Sbjct: 83  EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 129

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198
             ++    +    K     + +               QLA              +  I  
Sbjct: 130 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 189

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 190 LYETQRKYHSAKEAYEQLLQT 210


>gi|148703780|gb|EDL35727.1| ubiquitously transcribed tetratricopeptide repeat gene, X
           chromosome, isoform CRA_a [Mus musculus]
          Length = 953

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A +  ++  
Sbjct: 114 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 160

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198
             ++    +    K     + +               QLA              +  I  
Sbjct: 161 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 220

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 221 LYETQRKYHSAKEAYEQLLQT 241


>gi|148703782|gb|EDL35729.1| ubiquitously transcribed tetratricopeptide repeat gene, X
           chromosome, isoform CRA_c [Mus musculus]
          Length = 1333

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A +  ++  
Sbjct: 83  EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 129

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198
             ++    +    K     + +               QLA              +  I  
Sbjct: 130 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 189

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 190 LYETQRKYHSAKEAYEQLLQT 210


>gi|122066655|sp|O70546|KDM6A_MOUSE RecName: Full=Lysine-specific demethylase 6A; AltName: Full=Histone
           demethylase UTX; AltName: Full=Ubiquitously transcribed
           TPR protein on the X chromosome; AltName:
           Full=Ubiquitously transcribed X chromosome
           tetratricopeptide repeat protein
 gi|123208415|emb|CAM18408.1| ubiquitously transcribed tetratricopeptide repeat gene, X
           chromosome [Mus musculus]
 gi|123209608|emb|CAM27157.1| ubiquitously transcribed tetratricopeptide repeat gene, X
           chromosome [Mus musculus]
          Length = 1401

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A +  ++  
Sbjct: 109 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 155

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198
             ++    +    K     + +               QLA              +  I  
Sbjct: 156 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 215

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 216 LYETQRKYHSAKEAYEQLLQT 236


>gi|115383820|ref|XP_001208457.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114196149|gb|EAU37849.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 748

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 3/65 (4%)

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           +L+  ++ AA+   + VL     +  +E+A+ R  +A   L    ++ +   LI E YP+
Sbjct: 249 FLRSHQFDAALAEAETVLHV---SPISEKALFRKSQALYYLGRFQQSYDTHKLIAEHYPE 305

Query: 260 GYWAR 264
              A+
Sbjct: 306 NEMAK 310


>gi|94676677|ref|YP_588573.1| hypothetical protein BCI_0101 [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|94219827|gb|ABF13986.1| conserved hypothetical protein [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 215

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 22/56 (39%), Gaps = 3/56 (5%)

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
             + ++  YP+S  +   YY +G       + +   Q   +      S+I + Y N
Sbjct: 141 AFQRFMNTYPQSNYLPNAYYSLGQLNYNQGKKIEAIQ---EQAKAIYSKICKTYPN 193


>gi|62087170|dbj|BAD92032.1| ubiquitously transcribed tetratricopeptide repeat variant [Homo
           sapiens]
          Length = 1406

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A +  ++  
Sbjct: 112 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 158

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198
             ++    +    K     + +               QLA              +  I  
Sbjct: 159 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 218

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 219 LYETQRKYHSAKEAYEQLLQT 239


>gi|189011544|ref|NP_066963.2| lysine-specific demethylase 6A [Homo sapiens]
 gi|332860604|ref|XP_003317483.1| PREDICTED: lysine-specific demethylase 6A [Pan troglodytes]
 gi|206729942|sp|O15550|KDM6A_HUMAN RecName: Full=Lysine-specific demethylase 6A; AltName: Full=Histone
           demethylase UTX; AltName: Full=Ubiquitously-transcribed
           TPR protein on the X chromosome; AltName:
           Full=Ubiquitously-transcribed X chromosome
           tetratricopeptide repeat protein
 gi|57162135|emb|CAI40508.1| ubiquitously transcribed tetratricopeptide repeat, X chromosome
           [Homo sapiens]
 gi|57208875|emb|CAI41479.1| ubiquitously transcribed tetratricopeptide repeat, X chromosome
           [Homo sapiens]
 gi|119579772|gb|EAW59368.1| ubiquitously transcribed tetratricopeptide repeat, X chromosome
           [Homo sapiens]
 gi|168275736|dbj|BAG10588.1| ubiquitously transcribed X chromosome tetratricopeptide repeat
           protein [synthetic construct]
          Length = 1401

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A +  ++  
Sbjct: 107 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 153

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198
             ++    +    K     + +               QLA              +  I  
Sbjct: 154 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 213

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 214 LYETQRKYHSAKEAYEQLLQT 234


>gi|118350326|ref|XP_001008444.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89290211|gb|EAR88199.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 550

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 74/219 (33%), Gaps = 46/219 (21%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D R    +Y   +++ KE N  KA   F + ++  P      +  L   +  +  GK + 
Sbjct: 334 DSRNADALYYLGIIYQKENNIQKAISIFKEVTQINP-TKYIAQIQLGQLY--HQQGKVED 390

Query: 113 AASLGEEYITQYPES----KNVDYVYYLVG-------MSYAQMIRDVP------------ 149
           A    +  +   P +      + ++ Y +G       +    +  D              
Sbjct: 391 AIISYKRILQVQPNNYFALNYLSFLLYELGDFNQAELLCKKALAVDPNAYEPYHNLGLIY 450

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
            D+   +  +++    ++   +               N L       G  Y ++G    A
Sbjct: 451 QDKLLYEQAIKFYQSALKSNPDC----------AEAYNNL-------GCIYYEKGNLKEA 493

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           I +F+  +        A + ++ +   Y  + L++++++
Sbjct: 494 INQFEEAIKANPKFAEAHKNLSII---YENMGLIEKSQQ 529


>gi|33859492|ref|NP_033509.1| lysine-specific demethylase 6A [Mus musculus]
 gi|31419680|gb|AAH53433.1| Ubiquitously transcribed tetratricopeptide repeat gene, X
           chromosome [Mus musculus]
 gi|123208416|emb|CAM18409.1| ubiquitously transcribed tetratricopeptide repeat gene, X
           chromosome [Mus musculus]
 gi|123209609|emb|CAM27158.1| ubiquitously transcribed tetratricopeptide repeat gene, X
           chromosome [Mus musculus]
          Length = 1424

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A +  ++  
Sbjct: 109 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 155

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198
             ++    +    K     + +               QLA              +  I  
Sbjct: 156 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 215

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 216 LYETQRKYHSAKEAYEQLLQT 236


>gi|62739574|gb|AAH93868.1| Ubiquitously transcribed tetratricopeptide repeat, X chromosome
           [Homo sapiens]
 gi|109731235|gb|AAI13382.1| Ubiquitously transcribed tetratricopeptide repeat, X chromosome
           [Homo sapiens]
          Length = 1401

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A +  ++  
Sbjct: 107 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 153

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198
             ++    +    K     + +               QLA              +  I  
Sbjct: 154 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 213

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 214 LYETQRKYHSAKEAYEQLLQT 234


>gi|3021457|emb|CAA05692.1| UTX [Mus musculus]
          Length = 1333

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A +  ++  
Sbjct: 41  EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 87

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198
             ++    +    K     + +               QLA              +  I  
Sbjct: 88  QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 147

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 148 LYETQRKYHSAKEAYEQLLQT 168


>gi|325107034|ref|YP_004268102.1| hypothetical protein Plabr_0453 [Planctomyces brasiliensis DSM
           5305]
 gi|324967302|gb|ADY58080.1| hypothetical protein Plabr_0453 [Planctomyces brasiliensis DSM
           5305]
          Length = 351

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 74/211 (35%), Gaps = 32/211 (15%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
             L L   N+++A   F +     PF      +    A VQ + G+  QA S  +  I  
Sbjct: 162 GQLQLASSNYAEAEAAFTKIE-QSPFDDWKLSAKSSKARVQLAQGQIDQAISGFDSVI-- 218

Query: 124 YPESKNVDYV------YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
              +   D          ++G + A + +   +DQ  T L                    
Sbjct: 219 --NAPAKDDATKQRQLEAMLGKASA-LNQKNQFDQSLTLLA------------------D 257

Query: 178 ARFYVTVGRNQL-AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE-HAEEAMARLVE 235
               ++    +L A  +V  G   L +G+   A+  F LV   +S  + +  EA+  L +
Sbjct: 258 VIAKISEDNARLQAEAQVRRGTALLGQGKNQEALMAFLLVDILFSGQQDYHAEALYHLNK 317

Query: 236 AYVALALMDEAREVVSLIQERYPQGYWARYV 266
            +  +     A E    ++  YP   W + +
Sbjct: 318 LWPTVGQPGRAEEARGTLETEYPNSPWTKKL 348


>gi|239947836|ref|ZP_04699589.1| Tol system periplasmic component [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239922112|gb|EER22136.1| Tol system periplasmic component [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 245

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 18/46 (39%)

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
             A   Y   K  +A    + +I +YP S  +   Y+  G  + + 
Sbjct: 122 DLALAAYKDNKLTEAKDKFKNFIQKYPNSSLISNAYFWYGECFFKQ 167



 Score = 35.9 bits (82), Expect = 6.1,   Method: Composition-based stats.
 Identities = 10/65 (15%), Positives = 25/65 (38%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D+   ++ Y+ A+   K+   ++A + F    + +P + +   +        +    Y  
Sbjct: 113 DIAPDKQAYDLALAAYKDNKLTEAKDKFKNFIQKYPNSSLISNAYFWYGECFFKQKDYNG 172

Query: 113 AASLG 117
           AA   
Sbjct: 173 AAVNY 177


>gi|239618068|ref|YP_002941390.1| Tetratricopeptide TPR_2 repeat protein [Kosmotoga olearia TBF
           19.5.1]
 gi|239506899|gb|ACR80386.1| Tetratricopeptide TPR_2 repeat protein [Kosmotoga olearia TBF
           19.5.1]
          Length = 355

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 28/226 (12%), Positives = 70/226 (30%), Gaps = 43/226 (19%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           K  L+++E    +  ++  +     P   +  +           ++ GKY++AA   E+ 
Sbjct: 135 KGTLYIEEGKIDEGIKWLEEAIEKNPALVSAYSALGQ-----AYFNMGKYEEAAQYWEKE 189

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS---PY--- 174
           +   P             ++Y  +        +     +  +  ++    N+    Y   
Sbjct: 190 LILVPG----------RVVTYFMLADAYSLSGQN-DKAINVLKTLISNDPNNLLARYQLI 238

Query: 175 --------VKGARFYVTVGRNQLAAK--EVEI-GRYYLKRGEYVAAIPRFQLVLANYSDA 223
                    + A+       N +     ++EI  R   + G Y     R + ++  + + 
Sbjct: 239 ELYREIGEEEEAKKLKMEILNAIPTHTNDIEIWARVQFEHGNY----DRVKEIIEKFVET 294

Query: 224 EHAEEAMA-RLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
               + +   LV  Y       +A  ++   +       W  Y + 
Sbjct: 295 SPDMQHLKLLLVIPYAKTGDTQKACRLLKEFKNN---EMWYYYGKK 337


>gi|28898801|ref|NP_798406.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260365325|ref|ZP_05777876.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus K5030]
 gi|260880825|ref|ZP_05893180.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus AN-5034]
 gi|260897845|ref|ZP_05906341.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus Peru-466]
 gi|28807020|dbj|BAC60290.1| putative heat shock protein [Vibrio parahaemolyticus RIMD 2210633]
 gi|308087595|gb|EFO37290.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus Peru-466]
 gi|308093631|gb|EFO43326.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus AN-5034]
 gi|308111243|gb|EFO48783.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus K5030]
          Length = 391

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 58/186 (31%), Gaps = 34/186 (18%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A  ++      +A + F Q   +  +   A +  L++ +      ++++A     +    
Sbjct: 114 AKDYMVSGFLDRAEKIFEQLVEEPDYKEAALQ-QLVTIY--QQTREWEKAIHYANQLAKM 170

Query: 124 -YPESK---NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
               S+   N+ +        +   I  +      +   +Q+  + +             
Sbjct: 171 GNQRSRMRTNIAH--------FWCEIAMLDQADGNSNKAIQHFKKALSEDPKCVRAS--- 219

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                         + +GR YL+  +Y   I     VL    D +   + +  + E Y  
Sbjct: 220 --------------ISLGRIYLESEDYKQTIKYLTGVLE--QDKDFVSDVLPTIAECYHH 263

Query: 240 LALMDE 245
           L   DE
Sbjct: 264 LGQEDE 269


>gi|67923297|ref|ZP_00516781.1| Peptidase M48, Ste24p:Peptidase M, neutral zinc metallopeptidases,
           zinc-binding site [Crocosphaera watsonii WH 8501]
 gi|67854873|gb|EAM50148.1| Peptidase M48, Ste24p:Peptidase M, neutral zinc metallopeptidases,
           zinc-binding site [Crocosphaera watsonii WH 8501]
          Length = 672

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 28/62 (45%), Gaps = 2/62 (3%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASL 116
           ++  K +  L++Q +S+A        + +P   +    + L+  A      G+ ++A +L
Sbjct: 4   DLLNKGLQALQQQQYSEAVSLLGNFCQHYPDRNSDFYVQGLIALARAYRGNGQQEKAITL 63

Query: 117 GE 118
            +
Sbjct: 64  AQ 65


>gi|320589942|gb|EFX02398.1| NADPH oxidase regulator [Grosmannia clavigera kw1407]
          Length = 518

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 36/110 (32%), Gaps = 18/110 (16%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           + + EV+  A+       F +A   F + S          K L     +  + G++++A 
Sbjct: 4   KQEIEVWVAALGSYDSNEFDEALNEFEKVSD-------TSKILFNMGVIHATLGEHEKAV 56

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
              +  I      + +   Y+  G+S   +           +  L   + 
Sbjct: 57  ECYQRAIRL---DQYLAVAYFQQGVSNFLL--------GDFEEALANFND 95


>gi|295088007|emb|CBK69530.1| hypothetical protein [Bacteroides xylanisolvens XB1A]
          Length = 735

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 38/99 (38%), Gaps = 9/99 (9%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           ++  ++  A  +L ++ + +A E + +      F G + +      +      KY +A  
Sbjct: 498 WEDVLFPIADFYLAKERWDEAIEIYEELESIGGFEGESAEYYQKFGYALQKRKKYAEAIQ 557

Query: 116 LGEEYITQYP----ESKNVDYVY-----YLVGMSYAQMI 145
              +  T  P     ++++   Y     Y   ++Y + +
Sbjct: 558 AYLKADTLKPDNIWNNRHLAICYRLNRNYQAALTYYKKV 596


>gi|269139428|ref|YP_003296129.1| hypothetical protein ETAE_2083 [Edwardsiella tarda EIB202]
 gi|267985089|gb|ACY84918.1| hypothetical protein ETAE_2083 [Edwardsiella tarda EIB202]
 gi|304559324|gb|ADM41988.1| predicted periplasmic heat shock protein YciM precursor
           [Edwardsiella tarda FL6-60]
          Length = 389

 Score = 38.6 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 56/182 (30%), Gaps = 30/182 (16%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              ++    + +A E F+Q   +  F   A +  L+      +   + +A    E+ +  
Sbjct: 114 GRDYMAAGLYDRAEEMFSQLVDEADFRVSALQ-QLLLI--HQATSDWHKAIDAAEKLVRL 170

Query: 124 YPESKNVDYVYYLVGMSYAQM-IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
             + +  +  ++   ++   M   D+   Q   K                         V
Sbjct: 171 GKDQQRGEIAHFYCELALQAMGSDDLDRAQSLLKKAAA--------------ADKGCARV 216

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
           ++ R          GR +   GE   A+  F  VL    D     E +  +   Y AL  
Sbjct: 217 SIMR----------GRVFQALGEPAKAVAAFSQVLE--QDKAFVSEVLPLMETCYQALGQ 264

Query: 243 MD 244
            +
Sbjct: 265 PE 266


>gi|313683637|ref|YP_004061375.1| hypothetical protein [Sulfuricurvum kujiense DSM 16994]
 gi|313156497|gb|ADR35175.1| Tetratricopeptide repeat [Sulfuricurvum kujiense DSM 16994]
          Length = 347

 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 46/137 (33%), Gaps = 23/137 (16%)

Query: 64  AVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           A  F  + N+ K+ E ++        P     + +LL+     + AG  ++A      ++
Sbjct: 78  AQSFEHQGNYEKSVEIYHALLSKNRDP--IFQKDALLLLGKSFFKAGFLERARQT---FM 132

Query: 122 T-QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
              +  S       + + + Y + ++            L+ M  + E    +     +  
Sbjct: 133 QILH-NSPRTPQALHYLILIY-EQLQQYD-------KALEVMESLQELSPGT-----SNE 178

Query: 181 YV-TVGRNQLAAKEVEI 196
            +    R  L    ++I
Sbjct: 179 KLYIECRILLNDHRIDI 195



 Score = 35.5 bits (81), Expect = 8.8,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 19/40 (47%)

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           ++    +A+  L+  Y  L   D+A EV+  +QE  P   
Sbjct: 137 NSPRTPQALHYLILIYEQLQQYDKALEVMESLQELSPGTS 176


>gi|331665151|ref|ZP_08366052.1| cellulose synthase operon protein C [Escherichia coli TA143]
 gi|331057661|gb|EGI29647.1| cellulose synthase operon protein C [Escherichia coli TA143]
          Length = 1157

 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 80/235 (34%), Gaps = 34/235 (14%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK-----------EVEIGR 198
             Q +       +  +V R  ++  ++ A      G+   A             ++ +  
Sbjct: 557 RAQWS-----SNIQELVNRLQSNQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLAD 611

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 612 WAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 663



 Score = 35.9 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + ++ P      Y   L
Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537


>gi|254720177|ref|ZP_05181988.1| TPR repeat-containing protein [Brucella sp. 83/13]
 gi|265985184|ref|ZP_06097919.1| TPR repeat-containing protein [Brucella sp. 83/13]
 gi|264663776|gb|EEZ34037.1| TPR repeat-containing protein [Brucella sp. 83/13]
          Length = 295

 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 48/160 (30%), Gaps = 33/160 (20%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQ--------------REVYE-KAVLFL 68
           L I  ++    + G +  +S    +D                       E Y  +   + 
Sbjct: 32  LIIAVALLALTVAGCQSTNSTLSTVDRAQGSSENISSLTSVIQSNPRDPEGYNVRGSAYG 91

Query: 69  KEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
           K   + +A   F+Q     P  +   A ++L+      Y  G   +A       I   P+
Sbjct: 92  KAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR----YM-GDNNKAVQDYSRAIQLNPQ 146

Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
               D  Y   G  Y Q  R    DQ      L   ++ +
Sbjct: 147 ---YDAAYIGRGNVYRQAGR---LDQ-----ALNNFNQAI 175


>gi|163782042|ref|ZP_02177041.1| threonine synthase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882574|gb|EDP76079.1| threonine synthase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 261

 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 36/114 (31%), Gaps = 27/114 (23%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                    ++++  + Y   A                 IG+ Y + G+    + R + +
Sbjct: 152 EARDAFLNFIKKFPENKYTDNAF--------------FWIGKIYQELGD----LKRAEEI 193

Query: 217 LA---------NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
                         D     +A  +L+   V    ++EA    S++ +R+P   
Sbjct: 194 YKSLVDKCERGRLPDCNKLPDAYFQLMRINVDRGNVEEANRYYSILIDRFPTSD 247



 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 50/156 (32%), Gaps = 15/156 (9%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
            G  ++       +   +V      Y+KA+     +   +A + F    + FP       
Sbjct: 113 TGSLKEPQEKAEEEKEPEVEDAETAYKKAIELYSVKKLYEARDAFLNFIKKFPENKYTDN 172

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYI------TQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +      +    G  ++A  + +  +         P+   +   Y+         +  + 
Sbjct: 173 AFFWIGKIYQELGDLKRAEEIYKSLVDKCERGRL-PDCNKLPDAYF--------QLMRIN 223

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            D+   +   +Y S +++R+  S     AR    + 
Sbjct: 224 VDRGNVEEANRYYSILIDRFPTSDAAVRAREQKVLL 259


>gi|159027098|emb|CAO89283.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 363

 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 38/123 (30%), Gaps = 23/123 (18%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
             Q  +  L +      CF        +    +  V+      E+  +A   +K  N+ +
Sbjct: 1   MKQFTRLILLVGLLAGGCFSPSIAIADNPAGAI--VSKDSQVNELLRQARQLVKNGNYGE 58

Query: 76  AYEYFNQCSRDFPFAGVARKSLLM---------SAFVQYSAGKYQQAASLGEEYITQYPE 126
           A   +             + + L            F+Q   G Y  AA   ++ ++  P 
Sbjct: 59  AIAIYE------------QAAALDGNNARIFSGIGFLQTRQGDYNAAAQAYQKALSLDPS 106

Query: 127 SKN 129
           + +
Sbjct: 107 NPD 109


>gi|86606572|ref|YP_475335.1| Slt family transglycosylase [Synechococcus sp. JA-3-3Ab]
 gi|86555114|gb|ABD00072.1| transglycosylase, SLT family [Synechococcus sp. JA-3-3Ab]
          Length = 708

 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/162 (13%), Positives = 45/162 (27%), Gaps = 35/162 (21%)

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
            A   +   +Y +AA            +       Y  G S+      +  +    +   
Sbjct: 204 LADAYWEQREYGKAARAYGR-------APTTSRNLYRQGRSH-----QISRELPQARAAY 251

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
           Q    ++ ++ ++      R  +    +                     AI   + V + 
Sbjct: 252 QA---LLAQFPDAAEASLTRRRLAELSDL------------------PTAIELLRQVGSG 290

Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
                 A EA+  L + Y        A+ V   + ER+P   
Sbjct: 291 --SDREAPEALLSLSQLYDRNGSPQSAQAVRQTLWERFPVSE 330


>gi|67920262|ref|ZP_00513782.1| TPR repeat:Sel1-like repeat:Sel1-like repeat [Crocosphaera watsonii
           WH 8501]
 gi|67857746|gb|EAM52985.1| TPR repeat:Sel1-like repeat:Sel1-like repeat [Crocosphaera watsonii
           WH 8501]
          Length = 353

 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/177 (12%), Positives = 53/177 (29%), Gaps = 45/177 (25%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKA---------YEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
            +   +++++      E  + +A          +  N  +  +    + ++  L  A   
Sbjct: 23  TQSIEQLFQQGNQAQNEGRYREAESIWRQIISIDSNNAIAYFYIGLALRKQGKLEEATAA 82

Query: 105 YS----------------------AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
           Y                        GK ++A +  ++ I   P      + Y  +G++  
Sbjct: 83  YKKAIELDPNYSFAYNNMGNALRKQGKLEEAIAAYKKAIELDPND---AFAYNNMGLALD 139

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
                   DQ   +  +    + +E   N  Y   A + +    N+    E  I  Y
Sbjct: 140 --------DQGKLEEAIAAYKKAIELDPN--YAT-AYYNMGNALNRQGKLEEAIAAY 185



 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/122 (13%), Positives = 36/122 (29%), Gaps = 20/122 (16%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGK 109
           D  Y    Y       ++    +A   + +      ++ F      +           GK
Sbjct: 158 DPNYATAYYNMGNALNRQGKLEEAIAAYKKAIELDPNYSF------AYNNMGVALRKQGK 211

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y +A +  ++ I   P   N  + Y  +G++           Q      +    + +E  
Sbjct: 212 YDEAIAAYKKAIEINP---NYAFAYNNMGVAL--------RKQGKYDEAIAAYKKAIEIN 260

Query: 170 TN 171
            N
Sbjct: 261 PN 262


>gi|297460838|ref|XP_002701293.1| PREDICTED: sperm associated antigen 1 [Bos taurus]
          Length = 925

 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/117 (10%), Positives = 36/117 (30%), Gaps = 17/117 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           EK     K  ++ +A +Y+ +     P  A    ++             +  A    E+ 
Sbjct: 215 EKGNEAFKSGDYEEAVKYYTRSLSVLPTVAAYNNRAQAEL-----KLQNWNSAFQDCEKV 269

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           +   P +            +Y    +         +  ++ +++++    ++   K 
Sbjct: 270 LELEPGNLK---ALLRRATTYKHQNK--------LQEAIEDLNKVLAVEPDNELAKK 315


>gi|282164261|ref|YP_003356646.1| hypothetical protein MCP_1591 [Methanocella paludicola SANAE]
 gi|282156575|dbj|BAI61663.1| hypothetical protein [Methanocella paludicola SANAE]
          Length = 805

 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 14/119 (11%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           +   +A   F +  R  P + +A           ++ G +++A +  +E I   P +   
Sbjct: 519 RRPEEALNAFKEAVRLEPNSAIAHTY---LGDALWATGHHEEAIAKYKEAIQLEPTNT-- 573

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
            Y +Y +G+SY+ M        R     L     I++       V   R  +   ++ +
Sbjct: 574 -YAHYSLGISYSSM--------RKLDEALAEYDEILKINPKDEKVVMNRANIIHWKDMI 623


>gi|281423272|ref|ZP_06254185.1| aerotolerance-related exported protein [Prevotella oris F0302]
 gi|281402608|gb|EFB33439.1| aerotolerance-related exported protein [Prevotella oris F0302]
          Length = 255

 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 9/69 (13%), Positives = 22/69 (31%), Gaps = 4/69 (5%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            +A    +E+ + +A + +         +GV+           Y      +A    E   
Sbjct: 31  AEADKAYQEKKYQQAIKDYESL--LH--SGVSASLYYNLGNAYYRTDNITKAILNYERAA 86

Query: 122 TQYPESKNV 130
              P + ++
Sbjct: 87  LLEPGNSDI 95


>gi|282895338|ref|ZP_06303539.1| TPR repeat protein [Raphidiopsis brookii D9]
 gi|281199589|gb|EFA74450.1| TPR repeat protein [Raphidiopsis brookii D9]
          Length = 260

 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/115 (14%), Positives = 33/115 (28%), Gaps = 14/115 (12%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
            +  Y +        +   A   F+Q    +P   +   +        +  G  Q+A S 
Sbjct: 22  AQPYYNRGATRNDLGDKQGAINDFSQFINFYPRNSL---AYFNRGIAWHELGDKQRAISD 78

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
             + I   P +      YY  G S +        D       +   + ++    N
Sbjct: 79  FTQVIKLNPNNVA---AYYNRGASRS--------DLGDKHGAINDFTTVINLNPN 122


>gi|257457199|ref|ZP_05622375.1| tetratricopeptide repeat domain protein [Treponema vincentii ATCC
           35580]
 gi|257445458|gb|EEV20525.1| tetratricopeptide repeat domain protein [Treponema vincentii ATCC
           35580]
          Length = 1152

 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 24/64 (37%), Gaps = 6/64 (9%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             E+ +KA   ++ +N+  A     +    +P   +     L    + ++ G Y+ A   
Sbjct: 707 ADELLQKADKAVQAENWDTAAALLEEGIARYPANEL---FQLKLGDMYFNNGLYEPA--- 760

Query: 117 GEEY 120
              +
Sbjct: 761 YRRF 764


>gi|254283922|ref|ZP_04958890.1| sulfotransferase [gamma proteobacterium NOR51-B]
 gi|219680125|gb|EED36474.1| sulfotransferase [gamma proteobacterium NOR51-B]
          Length = 663

 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 38/107 (35%), Gaps = 20/107 (18%)

Query: 157 LMLQYMSRIVERYTNS---------------PYVKGARF--YVTVGRNQLAAKEVEIGRY 199
                + R+V R  ++                Y   A           + A   +++ R 
Sbjct: 162 EAEAILRRLVRRNPDNAEALRQLATMASEHFQYADAAALLTRAVEASPRFARGWLDLARA 221

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
           YL  G+Y AA+   + V+A Y +   A +A   L  +     L +EA
Sbjct: 222 YLDLGDYNAALESSERVVALYPE---AADAHVVLANSQSQANLHEEA 265


>gi|145489287|ref|XP_001430646.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124397745|emb|CAK63248.1| unnamed protein product [Paramecium tetraurelia]
          Length = 663

 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 64/226 (28%), Gaps = 43/226 (19%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE-KAVLFLKEQNFSKAYEYFNQ---C 83
            +I  CF +  E  +S   +  ++   +     Y      F + +NF +A + +      
Sbjct: 440 IAIGNCFSLTKEIDNSIKFFGRAIQLRKDYSYAYTLSGHEFSQNENFQQAKKSYEAATSL 499

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
            +   +     +  +      Y   KY+ A     + I   P +  +        MSYA 
Sbjct: 500 DQRQ-YNAWWGQGNM-----YYKTDKYEDAIKCFIQAIRINPNNPVLPTFL---AMSYAA 550

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
                          L+Y  +                 +        A  +      +K 
Sbjct: 551 KGEHND--------ALKYFEQSERLDP-----------MNGLNKYQKANSL------IKM 585

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMAR-LVEAYVALALMDEARE 248
            +Y  A+   Q +          E A+   +      L  + EA+ 
Sbjct: 586 DKYEQALSELQTLSQFIPK----EAAIYILMGRILKKLNKIQEAQN 627


>gi|262409404|ref|ZP_06085947.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294644941|ref|ZP_06722677.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a]
 gi|294807481|ref|ZP_06766283.1| tetratricopeptide repeat protein [Bacteroides xylanisolvens SD CC
           1b]
 gi|262352856|gb|EEZ01953.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292639754|gb|EFF58036.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a]
 gi|294445321|gb|EFG13986.1| tetratricopeptide repeat protein [Bacteroides xylanisolvens SD CC
           1b]
          Length = 735

 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 38/99 (38%), Gaps = 9/99 (9%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           ++  ++  A  +L ++ + +A E + +      F G + +      +      KY +A  
Sbjct: 498 WEDVLFPIADFYLAKERWDEAIEIYEELESIGGFEGESAEYYQKFGYALQKRKKYAEAIQ 557

Query: 116 LGEEYITQYP----ESKNVDYVY-----YLVGMSYAQMI 145
              +  T  P     ++++   Y     Y   ++Y + +
Sbjct: 558 AYLKADTLKPDNIWNNRHLAICYRLNRNYQAALTYYKKV 596


>gi|237713690|ref|ZP_04544171.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|229446137|gb|EEO51928.1| conserved hypothetical protein [Bacteroides sp. D1]
          Length = 734

 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 38/99 (38%), Gaps = 9/99 (9%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           ++  ++  A  +L ++ + +A E + +      F G + +      +      KY +A  
Sbjct: 497 WEDVLFPIADFYLAKERWDEAIEIYEELESIGGFEGESAEYYQKFGYALQKRKKYAEAIQ 556

Query: 116 LGEEYITQYP----ESKNVDYVY-----YLVGMSYAQMI 145
              +  T  P     ++++   Y     Y   ++Y + +
Sbjct: 557 AYLKADTLKPDNIWNNRHLAICYRLNRNYQAALTYYKKV 595


>gi|254515365|ref|ZP_05127426.1| putative PEP-CTERM system TPR-repeat lipoprotein [gamma
           proteobacterium NOR5-3]
 gi|219677608|gb|EED33973.1| putative PEP-CTERM system TPR-repeat lipoprotein [gamma
           proteobacterium NOR5-3]
          Length = 926

 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 33/92 (35%), Gaps = 3/92 (3%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
           +G    + +D+         Y    + +  L+  + ++  A + F+Q     P    A  
Sbjct: 250 LGKAEDADKDLAQLEKLIPNYPEVNFLRGQLYFDDGDYKNAIDAFSQVLTANP--NHAG- 306

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
           +LL+SA           A     +++T  P  
Sbjct: 307 ALLLSANANVREQNLATAQRQYTQFLTLQPGH 338


>gi|159028702|emb|CAO88174.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 165

 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 48/157 (30%), Gaps = 20/157 (12%)

Query: 19  LYKFALTIFFSI----AVCFLVGWERQSSRDVYLDSVTDVRYQREV--YEKAVLFLKEQN 72
           +  FAL    S+     +  +       SR      +     Q  +  Y + V +++++ 
Sbjct: 1   MKSFALLTTVSLISLSTLATVRPVMALESRQPAETRIAQGNNQDAIGHYNRGVDYIQQKK 60

Query: 73  FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
           +  +   F +     P       + L    +    GK   A S   + +   P +     
Sbjct: 61  YDLSLAEFTKAIELDP--NYTE-AYLNRGNLYQQQGKPDLALSDYNQALNINPRN---AE 114

Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            Y   G+ Y           + T+  +    +  E Y
Sbjct: 115 AYVRRGILYYYR--------QETEKAIGDFRQAAELY 143


>gi|46580776|ref|YP_011584.1| N-acetylmuramoyl-L-alanine amidase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46450196|gb|AAS96844.1| N-acetylmuramoyl-L-alanine amidase, putative [Desulfovibrio
           vulgaris str. Hildenborough]
          Length = 543

 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 38/97 (39%), Gaps = 8/97 (8%)

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
              A + V + R  LA + +    +        AA+ R++ V   Y  +  A++A+    
Sbjct: 55  APAALYRVALTREGLARRSMNPADF-------KAAVDRYEEVARRYPRSALADDALFAAA 107

Query: 235 E-AYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
           +     L     AR+++      +P+G  A     ++
Sbjct: 108 KLCMERLDDASAARKILERQLREFPKGDMADAARAML 144


>gi|14325465|dbj|BAB60369.1| hypothetical protein [Thermoplasma volcanium GSS1]
          Length = 513

 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 59/183 (32%), Gaps = 29/183 (15%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL-LMSAFVQYSAGKYQ 111
           D +   E  E+A   +   N+++A E  ++     P       SL L+ A   Y  G Y 
Sbjct: 7   DEKTPDEYAEEARSDIAAGNYAEAIEKIDKAIDKEPRNP----SLHLIRADALYRQGNYS 62

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            A             +  +   + L  + Y  M  D    +      ++      + Y  
Sbjct: 63  SAIEELNFTEHMDKNNPEL---FSLKSICYGSM-GDFKRSKEEADKAIKA----DQSYPF 114

Query: 172 SPYVKGARFYVTVGRNQLAAKEV---------------EIGRYYLKRGEYVAAIPRFQLV 216
           + Y + A        +  A K+                ++   Y ++ +Y  A+   + V
Sbjct: 115 AYYNRAAALRGLGDVDG-AEKDFRKYIEMQPSDPDPHYDLAEIYFEKKDYKKAMEEVKAV 173

Query: 217 LAN 219
           L N
Sbjct: 174 LRN 176


>gi|295132916|ref|YP_003583592.1| TPR repeat protein [Zunongwangia profunda SM-A87]
 gi|294980931|gb|ADF51396.1| TPR repeat protein [Zunongwangia profunda SM-A87]
          Length = 686

 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 76/225 (33%), Gaps = 45/225 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++   +L++ NF+KA  +F    +++P    A    L         G+ Q+A S+  E +
Sbjct: 23  QEGFGYLEKGNFAKAETFFEAILKEYPDNKTAN---LCYGRAVGLNGEPQKATSIFTELL 79

Query: 122 TQYPESKNVD--YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS------- 172
            +YP    ++  Y   L+  S+                  +Y S +V+RY  +       
Sbjct: 80  EEYPGDIEIELNYAESLLWGSHFN-------------KAKEYYSDLVQRYPENFAALLGF 126

Query: 173 -------PYVKGARFYVTVGRN--------QLAAKEVEIGRYYLKRGE--YVAAIPRFQL 215
                       A  YV              ++ K + +G  Y K     Y  AI     
Sbjct: 127 ANTLSNLKEYDNALLYVNRALETSPGNPNAMVSKKYIRLGFAYQKMQNQEYEPAISLLNK 186

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            L ++S      E +      Y+     +EA+ V   + +     
Sbjct: 187 NLEDFSG---DRETLLNKANIYLITKETEEAKNVYLELAKNAKDS 228


>gi|32471266|ref|NP_864259.1| hypothetical protein RB1168 [Rhodopirellula baltica SH 1]
 gi|32396968|emb|CAD71938.1| hypothetical protein-transmembrane prediction [Rhodopirellula
           baltica SH 1]
          Length = 742

 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/113 (14%), Positives = 41/113 (36%), Gaps = 16/113 (14%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK---SLLMSAFVQYSAGKYQQA-ASLGEE 119
           A   L +     A   +N        +G + +   + L  A+    +G+  QA  +  ++
Sbjct: 268 ASGLLDDGQLELAQSTYNMVID----SGDSPQLATARLGLAWCTAMSGEDDQAALTAIDQ 323

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           ++  + E  +V     +      +  +    DQ         + R++ ++ +S
Sbjct: 324 FLKHHSEHADVPSALLMQMSCQFRTGQSESADQT--------LERLLTQHADS 368


>gi|331649352|ref|ZP_08350438.1| cellulose synthase operon protein C [Escherichia coli M605]
 gi|330909587|gb|EGH38101.1| cellulose synthase operon protein C [Escherichia coli AA86]
 gi|331041850|gb|EGI13994.1| cellulose synthase operon protein C [Escherichia coli M605]
          Length = 1157

 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 78/235 (33%), Gaps = 34/235 (14%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  +A +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 500 RLSQDLWQAGQRSKADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK-----------EVEIGR 198
             Q         +  +V R  N   ++ A      G+   A             ++ +  
Sbjct: 557 RAQWN-----SNIQELVNRLQNDQVLETANRLRENGKEAEAEAMLRQQPPSSRIDLTLAD 611

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 612 WAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 663


>gi|242279842|ref|YP_002991971.1| hypothetical protein Desal_2376 [Desulfovibrio salexigens DSM 2638]
 gi|242122736|gb|ACS80432.1| TPR repeat-containing protein [Desulfovibrio salexigens DSM 2638]
          Length = 247

 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 6/65 (9%), Positives = 18/65 (27%), Gaps = 3/65 (4%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
               +   ++  A     Q  ++ P +       L      +  G  + A +   + +  
Sbjct: 46  GQELIDRGDYELAVSSLEQSLKNHPRSDW--LYSL-LGRAYFKMGDLELAEAQFRKALDI 102

Query: 124 YPESK 128
              + 
Sbjct: 103 NKNNP 107


>gi|118588378|ref|ZP_01545787.1| probable O-linked GlcNAc transferase protein [Stappia aggregata IAM
           12614]
 gi|118439084|gb|EAV45716.1| probable O-linked GlcNAc transferase protein [Stappia aggregata IAM
           12614]
          Length = 271

 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 53/168 (31%), Gaps = 34/168 (20%)

Query: 19  LYKFA-----LTIFFSIAVCFLVG---------WERQSSRDVYLDSVTDVRYQRE-VYE- 62
           ++KF      + +   +A C   G             S+    L +V D        Y  
Sbjct: 1   MHKFLPHATLIGLASMLAACNTSGVYDDVPTNSSAGSSTNIASLTAVIDANPNDASAYST 60

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           + + + +     KA E FN+  +  P  +   A + L+         G+ +QA +     
Sbjct: 61  RGIAYGQAGKLDKAVEDFNKALQLNPQSYQTYANRGLV-----YRRMGQNEQAVADYTRA 115

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           I   P   + D  Y   G  Y          Q      L   + ++ R
Sbjct: 116 INIKP---DYDVAYVGRGNIY--------RQQGNYNAALADFNSVITR 152


>gi|84624952|ref|YP_452324.1| putative lipoprotein [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|84368892|dbj|BAE70050.1| putative lipoprotein [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 204

 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 33/108 (30%), Gaps = 13/108 (12%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           +F  + +  LVG      +     S            +A   +      +A + F   SR
Sbjct: 14  MFALVLLSALVGCASAPKKAPSPSSFDATM------SRAEAEVTNGGPEQALKTFEDASR 67

Query: 86  DFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
             P       R + L     Q+    Y +A    +E + + P     D
Sbjct: 68  ADPTRKEPWVRIAQL-----QFDRANYARAIVAAQEVLQRDPNDLVAD 110


>gi|99082203|ref|YP_614357.1| tetratricopeptide TPR_2 [Ruegeria sp. TM1040]
 gi|99038483|gb|ABF65095.1| Tetratricopeptide TPR_2 [Ruegeria sp. TM1040]
          Length = 283

 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           Y+ A+  L+ +N+  A + F      +P + +  +            G  ++AA   
Sbjct: 164 YKLAMSDLEAENYQAAADRFATFKEAYPGSPLTAQVDFGRGKALDGLGDTREAARAY 220


>gi|113475812|ref|YP_721873.1| hypothetical protein Tery_2167 [Trichodesmium erythraeum IMS101]
 gi|110166860|gb|ABG51400.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101]
          Length = 1014

 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 46/118 (38%), Gaps = 9/118 (7%)

Query: 53  DVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           +    R++ YE+A+   ++Q +  A + + +     P   +     L    + Y    YQ
Sbjct: 250 ETESSRQLFYEEAIYLHQQQQWQLAEKKYQELLLWQPNNSL---VWLQLGVLYYQIENYQ 306

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Q+ S   + +   P S    Y YY  G+   + I  +     + +  ++     ++ Y
Sbjct: 307 QSISAISKSLEIEPSS----YGYYYQGLG-LEKINQIEQAIASHQQAIKLDINFIDPY 359


>gi|327403594|ref|YP_004344432.1| hypothetical protein Fluta_1602 [Fluviicola taffensis DSM 16823]
 gi|327319102|gb|AEA43594.1| hypothetical protein Fluta_1602 [Fluviicola taffensis DSM 16823]
          Length = 191

 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/66 (16%), Positives = 27/66 (40%), Gaps = 3/66 (4%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           +A+   ++Q + +A  +F+      P++                 G+Y  A +  + Y+ 
Sbjct: 110 EAIDAFEKQEYQEAIRFFSLA---APYSKYDIDIYEKRGICYLKMGQYIDALADFDYYLI 166

Query: 123 QYPESK 128
             PE++
Sbjct: 167 HNPENE 172


>gi|284923560|emb|CBG36655.1| cellulose synthase operon protein C (TPR-repeat-containing protein)
           [Escherichia coli 042]
          Length = 1140

 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 80/235 (34%), Gaps = 34/235 (14%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 426 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 482

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 483 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 539

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK-----------EVEIGR 198
             Q +       +  +V R  ++  ++ A      G+   A             ++ +  
Sbjct: 540 RAQWS-----SNIQELVNRLQSNQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLAD 594

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 595 WAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 646



 Score = 35.9 bits (82), Expect = 6.5,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 339 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 395

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 396 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 441

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 442 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 490

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + ++ P      Y   L
Sbjct: 491 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 520


>gi|251778908|ref|ZP_04821828.1| TPR-repeat-containing protein [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
 gi|243083223|gb|EES49113.1| TPR-repeat-containing protein [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
          Length = 423

 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 44/122 (36%), Gaps = 9/122 (7%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y K +     QN+ KA   F++       + +    +   A        + +A  L E Y
Sbjct: 308 YGKGMEEFNIQNYEKANIEFSKAYDYSEGSYLKEHIMFYKAVTLEQLNNFDEAIKLYELY 367

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
             +YP+    D V Y + + +    R         +  + Y +++ + ++ S Y      
Sbjct: 368 YAEYPKGSYADNVLYNLSLMFNNTDR---------EKSIYYANKLRDDFSESIYFNETIN 418

Query: 181 YV 182
            +
Sbjct: 419 KI 420


>gi|284037963|ref|YP_003387893.1| TIR protein [Spirosoma linguale DSM 74]
 gi|283817256|gb|ADB39094.1| TIR protein [Spirosoma linguale DSM 74]
          Length = 824

 Score = 38.6 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/74 (13%), Positives = 23/74 (31%), Gaps = 18/74 (24%)

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSA-FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
            E   + + +         +LL  A +  Y     ++A +    +I  Y           
Sbjct: 691 IENLEKINTN----KAKEMALLSQADYDYYINNDPEEALNTIRRFIYLY----------- 735

Query: 136 LVGMSYAQMIRDVP 149
             G++Y  + +   
Sbjct: 736 --GLTYYVITKKFD 747


>gi|321252159|ref|XP_003192308.1| peroxisome targeting sequence binding protein [Cryptococcus gattii
           WM276]
 gi|317458776|gb|ADV20521.1| Peroxisome targeting sequence binding protein, putative
           [Cryptococcus gattii WM276]
          Length = 799

 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 38/113 (33%), Gaps = 10/113 (8%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCS 84
           +   +      G +   + D +L ++        +Y +           S+A +Y++Q  
Sbjct: 641 VALGVLFNMSGGEDYSKAEDCFLAALAVRPEDWLLYNRLGATLANSGRSSEAIQYYHQAL 700

Query: 85  RDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV--DYVY 134
              P F     ++L        + G+YQ AA    + +    +       Y Y
Sbjct: 701 TLHPSF----VRALFNLGIAYMNLGQYQAAAQSILDALRL--QHSGASEAYAY 747


>gi|317484802|ref|ZP_07943698.1| tetratricopeptide [Bilophila wadsworthia 3_1_6]
 gi|316923932|gb|EFV45122.1| tetratricopeptide [Bilophila wadsworthia 3_1_6]
          Length = 282

 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 44/124 (35%), Gaps = 18/124 (14%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL--LMSAFVQYSA 107
           S TD      +Y KA+   +      A       +R+ P    A+ +L  +M       A
Sbjct: 125 SGTDAASPEVLYNKALAMYQMGLTDDAGTDLGTYAREHPNDAEAQNALGVVML-----RA 179

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           G Y  A +  +  I   P  +  +Y YY           +V  +Q+  K  +   +R V 
Sbjct: 180 GNYASAKAHLDRAIALRP--EQGEY-YYNRA--------NVLKEQKEFKAAIDDYTRAVA 228

Query: 168 RYTN 171
              +
Sbjct: 229 FIPD 232


>gi|300716934|ref|YP_003741737.1| hypothetical protein [Erwinia billingiae Eb661]
 gi|299062770|emb|CAX59890.1| Conserved uncharacterized protein [Erwinia billingiae Eb661]
          Length = 389

 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 62/189 (32%), Gaps = 30/189 (15%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              ++    + +A E F+Q   +  F   A +  L+      +   + +A  + E  +  
Sbjct: 114 GRDYMAAGFYDRAEEMFSQLVDETDFRVGALQ-QLLII--HQATSDWPKAIEVAERLVKL 170

Query: 124 YPESKNVDYVYYLVGMSYAQM-IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
             + + ++  ++   ++   M   D+       +               S   + AR  +
Sbjct: 171 GKDKQRMEIAHFYCELALQAMGSDDLDRAMGLLRKG------------ESADRQSARVSI 218

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
            +GR  +A             GEY  A+   Q VL    D E   E +  L   Y  L  
Sbjct: 219 MMGRIHMAK------------GEYAKAVGHLQRVLE--QDKELVSETLEMLETCYQQLDQ 264

Query: 243 MDEAREVVS 251
            +   E + 
Sbjct: 265 PNAWAEYLK 273


>gi|289615867|emb|CBI57373.1| unnamed protein product [Sordaria macrospora]
          Length = 624

 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 45/134 (33%), Gaps = 20/134 (14%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGV 92
           +G   ++  D       +       Y +A L   +  F++A + + +      DF F+  
Sbjct: 387 LGHPDKAEEDFNKAIEQNAEDPDIYYHRAQLHFIKGEFAEAAKDYQKSIDLDSDFIFSH- 445

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
                +     QY  G    + +     +  + ++ +V Y YY           ++  DQ
Sbjct: 446 -----IQLGVTQYKMGSIASSMATFRRCMKNFDQTPDV-YNYY----------GELLLDQ 489

Query: 153 RATKLMLQYMSRIV 166
              +  ++     +
Sbjct: 490 NKFQEAIEKFDTAI 503


>gi|198275712|ref|ZP_03208243.1| hypothetical protein BACPLE_01887 [Bacteroides plebeius DSM 17135]
 gi|198271341|gb|EDY95611.1| hypothetical protein BACPLE_01887 [Bacteroides plebeius DSM 17135]
          Length = 721

 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 28/70 (40%), Gaps = 8/70 (11%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCS--RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           + +        +N+ +A + F +       P      K+     +  + +GKY++A  + 
Sbjct: 589 LMQTGQCLAALKNYPEAIKVFYKVEFLETHP-----EKARRAIGWCYFMSGKYEEAVRMY 643

Query: 118 EEYITQ-YPE 126
           E+ +    P+
Sbjct: 644 EKLLALENPQ 653


>gi|85714946|ref|ZP_01045931.1| peptidase C14, caspase catalytic subunit p20 [Nitrobacter sp.
           Nb-311A]
 gi|85698143|gb|EAQ36015.1| peptidase C14, caspase catalytic subunit p20 [Nitrobacter sp.
           Nb-311A]
          Length = 725

 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 20/46 (43%), Gaps = 2/46 (4%)

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
               + +T      + R ++RY +SP     +  + V R+  A +E
Sbjct: 352 FDRLKDSTDQA--ALKRFIKRYPDSPLALQVQHRLEVLRSAAAERE 395


>gi|319796161|ref|YP_004157801.1| lipoprotein [Variovorax paradoxus EPS]
 gi|315598624|gb|ADU39690.1| putative lipoprotein [Variovorax paradoxus EPS]
          Length = 221

 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 37/104 (35%), Gaps = 9/104 (8%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
             A  FL G    ++ D  +    +   +      A       + S A   + + + D P
Sbjct: 6   IAATSFLSGC--TTTPDAAVAQSAEAFNKSLAEADAAAAAATGDKSAAIRQYQKIATDNP 63

Query: 89  --FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
                 +R + +      ++ G+Y  A S  EE + + P S+  
Sbjct: 64  TRGEPWSRIAQI-----YFNEGRYSLAISSAEETLRRDPTSRQA 102


>gi|307297487|ref|ZP_07577293.1| tetratricopeptide TPR_2 repeat protein [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306916747|gb|EFN47129.1| tetratricopeptide TPR_2 repeat protein [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 356

 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 35/249 (14%), Positives = 75/249 (30%), Gaps = 55/249 (22%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           D+ +D+  D     E+  K  +FL+  +  +  ++            +   S L++A+  
Sbjct: 120 DLLMDANVDKATVCEL--KGSIFLESGDEEEGIKWLQ--------NALKIDSSLVTAYSF 169

Query: 105 -----YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
                Y+ G +  AA   +  I   P+            +    M+ D   +       L
Sbjct: 170 LGQTFYNRGDFDSAADCWQREIAASPDH-----------LVTYFMLTDAYINAGRMDEAL 218

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV--------------EI------GRY 199
             +  + +R  +S      +  +     ++   E+               I       + 
Sbjct: 219 NVLKDLSKRDPDSILT---KVEMAELYEKMGNIEMRRIVEDEVLKTKPVYINDVEPWAKI 275

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
             K   Y          L    D     E    LV +++     DEA+ ++   +    +
Sbjct: 276 QFKHSNYDVVEEVATNFLKENPD---RPELKMLLVVSHMKKGQCDEAKRLLKEFEN---E 329

Query: 260 GYWARYVET 268
             W  Y + 
Sbjct: 330 QVWYFYGKK 338


>gi|296211379|ref|XP_002752387.1| PREDICTED: RNA polymerase II-associated protein 3-like [Callithrix
           jacchus]
          Length = 744

 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 46/143 (32%), Gaps = 21/143 (14%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D +    + EK   + K+  + +A + + +     P+  V        A   +   K+  
Sbjct: 208 DSQKALVLKEKGNKYFKQGKYDEAIDCYTEGMDADPYNPVLPT---NRASAYFRLKKFAV 264

Query: 113 AASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           A S     I       N  Y   Y   G +   + +         +   +   R++E   
Sbjct: 265 AESDCNLAIAL-----NKSYTKAYSRRGAARFALQK--------LEEAKKDYERVLELEP 311

Query: 171 NSPYVKGARFYVTVGRNQLAAKE 193
           N+     A   +      LA+KE
Sbjct: 312 NN---FEATNELRKINQALASKE 331


>gi|288818802|ref|YP_003433150.1| tetratricopeptide repeat family protein [Hydrogenobacter
           thermophilus TK-6]
 gi|288788202|dbj|BAI69949.1| tetratricopeptide repeat family protein [Hydrogenobacter
           thermophilus TK-6]
 gi|308752388|gb|ADO45871.1| Tetratricopeptide TPR_2 repeat protein [Hydrogenobacter
           thermophilus TK-6]
          Length = 545

 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 77/193 (39%), Gaps = 32/193 (16%)

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           +  +     +     +++ +L  A     +G+ ++A ++ E    + P++  + Y  Y++
Sbjct: 103 KALSALEEGYRLLPKSKEIMLFLADEYLRSGENKKAKAVIENLAKESPDNP-LPY--YML 159

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
              Y          +   +L + Y+ + ++                  ++   A  + +G
Sbjct: 160 ARIYLS--------EGNKELAIHYLEKSLQ-----------------IKSSFEAGFITLG 194

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
             Y + GEY  A   ++ VL    D +    A+ RL   YV    ++EA+++   +   Y
Sbjct: 195 SIYEESGEYTKAEQLYKDVLKTSPDNKV---ALERLANLYVLTNRLEEAQDIYERLARLY 251

Query: 258 PQGYWARYVETLV 270
           P+  +A Y   LV
Sbjct: 252 PEENYA-YQYALV 263


>gi|240850065|ref|YP_002971458.1| tetratricopeptide repeat protein [Bartonella grahamii as4aup]
 gi|240267188|gb|ACS50776.1| tetratricopeptide repeat protein [Bartonella grahamii as4aup]
          Length = 564

 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 41/273 (15%), Positives = 85/273 (31%), Gaps = 58/273 (21%)

Query: 6   GRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAV 65
           GR   IF+  ++ LY       F +A       +   +  +Y        Y    Y+   
Sbjct: 291 GRIARIFKQLSFALYPQNDATLFQLAHISAKLSDPHKAIKLYRALSPKSPY----YKDGQ 346

Query: 66  LFL-----KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK--------YQQ 112
           L L        N+ +A +     +  FP      +++L++    Y               
Sbjct: 347 LHLAFLLANNNNYKEAIKLLTLLNEKFP----NDRNILITLVAFYMQDNKFLEAIKTLDT 402

Query: 113 AASLGEEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           A +  + +          D+ ++Y  G+++ ++        +        + + +E + N
Sbjct: 403 AIAQIKNFQQD-------DWKLFYQRGIAFERL--------KQWPKAEIDLRKSLEFFPN 447

Query: 172 SP----YVKGA----------RFYVTVGRNQLAAKEVEI----GRYYLKRGEYVAAIPRF 213
            P    Y+  +             +    + L A    I    G  Y K  EY  A+   
Sbjct: 448 QPQVLNYLAYSLVERGEKLEESLRMLQKASALQAHNSHILDSLGWAYYKLKEYNKAVQIL 507

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
           +  +    +     +    L +AY  +    EA
Sbjct: 508 ENAVRLQPEDPTLND---HLGDAYWKVGRKREA 537


>gi|187918399|ref|YP_001883962.1| tetratricopeptide repeat family protein [Borrelia hermsii DAH]
 gi|119861247|gb|AAX17042.1| tetratricopeptide repeat family protein [Borrelia hermsii DAH]
          Length = 211

 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/67 (14%), Positives = 25/67 (37%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              +  +  +  A ++F +            K  +++A   Y   +Y +A    E  +  
Sbjct: 97  GEAYFFQGQYKNALKHFQKYISLGSNGARIAKVYILTADSFYKLERYNEADFAYENALRF 156

Query: 124 YPESKNV 130
            P ++N+
Sbjct: 157 LPNNQNI 163


>gi|91783675|ref|YP_558881.1| hypothetical protein Bxe_A2139 [Burkholderia xenovorans LB400]
 gi|91687629|gb|ABE30829.1| Hypothetical TPR domain protein [Burkholderia xenovorans LB400]
          Length = 530

 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 22/79 (27%), Gaps = 15/79 (18%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQC----SRDFPFAGVA----RKSLLMSAFVQY-------S 106
           ++    L+  N+  A E F+         +     A      S L +A   +        
Sbjct: 365 QQGRWNLEHGNYKAAAERFDDPMWKGRAQYLAGDYAAALETFSRLKTAQAYFYIGNTLAH 424

Query: 107 AGKYQQAASLGEEYITQYP 125
              Y  A    +  +   P
Sbjct: 425 LDDYAGAIKAYDNALKLQP 443


>gi|49082798|gb|AAT50799.1| PA4327 [synthetic construct]
          Length = 269

 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 20/55 (36%), Gaps = 4/55 (7%)

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
            Y +G+ Y         DQR       Y  R+V  +  +   + A+  +   R +
Sbjct: 94  LYQIGLIYMSRYN----DQRDDAKATDYFQRVVREFPGTHAAEHAQARLLAMRQR 144


>gi|41408601|ref|NP_961437.1| EmbR_2 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41396959|gb|AAS04820.1| EmbR_2 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 380

 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 8/60 (13%), Positives = 18/60 (30%), Gaps = 7/60 (11%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK--SLLMSAFVQYSAGKYQQAASLGEE 119
            +A   +               +R+ P      +  + LM+A+  Y   +   A +    
Sbjct: 170 AQAEAEIACGRAFSVITELESLTREHP---YREQLWAQLMTAY--YLTDRQSDALAAYRR 224


>gi|332291970|ref|YP_004430579.1| Tetratricopeptide repeat protein [Krokinobacter diaphorus 4H-3-7-5]
 gi|332170056|gb|AEE19311.1| Tetratricopeptide repeat protein [Krokinobacter diaphorus 4H-3-7-5]
          Length = 254

 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 7/79 (8%), Positives = 22/79 (27%), Gaps = 3/79 (3%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           T  +   +++E+         F +A + + +          +       A   +      
Sbjct: 20  TTAQTPEQLFEQGNSHYANGQFQEAIDAYKKVLDT---NQESASIYYNLANAHFKLNNVA 76

Query: 112 QAASLGEEYITQYPESKNV 130
            +    E+     P  + +
Sbjct: 77  PSIYYYEKAKRLAPADQEI 95


>gi|332291115|ref|YP_004429724.1| Tetratricopeptide TPR_1 repeat-containing protein [Krokinobacter
           diaphorus 4H-3-7-5]
 gi|332169201|gb|AEE18456.1| Tetratricopeptide TPR_1 repeat-containing protein [Krokinobacter
           diaphorus 4H-3-7-5]
          Length = 261

 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 7/52 (13%), Positives = 18/52 (34%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           D    R +++  V  +       A ++  +   ++  +  A +  L     Q
Sbjct: 207 DFTTPRFLFKAGVAAIDLGKMDAAVKHLTRIKEEYATSEYASQVDLYLGRAQ 258


>gi|293412960|ref|ZP_06655628.1| cellulose synthase operon protein C [Escherichia coli B354]
 gi|291468607|gb|EFF11100.1| cellulose synthase operon protein C [Escherichia coli B354]
          Length = 1161

 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 78/236 (33%), Gaps = 36/236 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 447 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 503

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 504 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 560

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197
             Q +       +  +V R   S  V      +   G+   A             ++ + 
Sbjct: 561 RAQWS-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 614

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 615 DWAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 667



 Score = 36.2 bits (83), Expect = 5.5,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 360 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 416

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 417 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 462

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 463 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 511

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + ++ P      Y   L
Sbjct: 512 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 541


>gi|298491174|ref|YP_003721351.1| Lytic transglycosylase catalytic ['Nostoc azollae' 0708]
 gi|298233092|gb|ADI64228.1| Lytic transglycosylase catalytic ['Nostoc azollae' 0708]
          Length = 729

 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 74/221 (33%), Gaps = 38/221 (17%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA- 113
           +  + +Y  A     ++   +A   + Q  + FP A     +LL  A         + A 
Sbjct: 259 KTAKNLYRTARGLQLDKKRDQAVVLYKQQVQQFPTAEETGTALLRLA---------EIAP 309

Query: 114 ----ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
                S  ++ I ++P  K          +     + +   D ++     +    ++ +Y
Sbjct: 310 GKGVISYLDQIINKFP--KQAP-----SALVKKAQLLETLKDNQSANTAWKL---LLGKY 359

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
           +NS      R+   + R+              K  +YV A    Q +      +  A  A
Sbjct: 360 SNSEEAAEYRWKTALNRS--------------KSRDYVGAWQWAQPIAIENPKSILAPRA 405

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
              + +    L    EA      +  ++PQ Y+A    +++
Sbjct: 406 SFWVGKWATMLGKQQEAHNAYKYVLSQFPQSYYAWRSASIL 446


>gi|254411241|ref|ZP_05025018.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
 gi|196181742|gb|EDX76729.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
          Length = 906

 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/154 (9%), Positives = 41/154 (26%), Gaps = 9/154 (5%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQC 83
                +  C        +++     +       + + ++         ++ A        
Sbjct: 35  VFLAVLTFCVTTLTHLLATQATLPPTAQPSISPQTLVQQGKTHYDAGQYTDAINLLQQAA 94

Query: 84  SRDFPFAGVARKS--LLMSAFVQYSAGKYQQAASLGEEYITQ--YPESKNVDYVYYLVGM 139
                     R++  L   A      G++Q A       +      ++ +    + L G 
Sbjct: 95  DAFQSQGDRLRQAMTLTNLALAYQQLGQWQDAQDTITTSLQLLDNAQTPDT---WTLQGA 151

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
           +   +   +   Q   +  L   +  V  YT + 
Sbjct: 152 A-FNVQGQLYLAQGNLEAALDSFTTAVNSYTQTE 184


>gi|150401175|ref|YP_001324941.1| TPR repeat-containing protein [Methanococcus aeolicus Nankai-3]
 gi|150013878|gb|ABR56329.1| Tetratricopeptide TPR_2 repeat protein [Methanococcus aeolicus
           Nankai-3]
          Length = 723

 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 32/90 (35%), Gaps = 9/90 (10%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS---------LLMSAFVQYSA 107
            +++  +      +  + +A + + +     P    A+           L     + Y  
Sbjct: 14  DKDLVNEGNKLYFKGKYLEAIDKYLEAISINPTNKTAKLKIEASNKIICLYKDISLNYQN 73

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           G Y++   L +  I   P+ + + Y+ Y +
Sbjct: 74  GDYEKCIPLCKNIIQLNPKDQKIKYMEYRI 103


>gi|134133313|ref|NP_001077052.1| RNA polymerase-associated protein CTR9 homolog [Danio rerio]
 gi|126635345|dbj|BAF48400.1| RNA polymerase-associated protein Ctr9 homolog [Danio rerio]
          Length = 1160

 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 42/276 (15%), Positives = 99/276 (35%), Gaps = 39/276 (14%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
           A L RA    E   +     ++T  +++A  +    E   +  +Y + + +     + Y 
Sbjct: 476 ASLERAKAEGEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYL 535

Query: 63  K-AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           +   +   + NF +A ++F +    ++D P    +    L  A       ++       E
Sbjct: 536 RLGAMARDKGNFYEASDWFKEALQINQDHP-DAWSLIGNLHLA-----KQEWGPGQKKFE 589

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ----RATKLMLQYMSRIVERYTNSPY 174
             + Q P ++N  Y    +G  + Q +     D+    R     L    +++   + + Y
Sbjct: 590 RILKQ-PSTQNDTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDSKNLY 648

Query: 175 VKGA-------RFYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVL 217
                      + Y    R+  A  +E         + +   Y+++ +Y++A+  ++  L
Sbjct: 649 AANGIGAVLAHKGYFREARDVFAQVREATAEISDVWLNLAHIYVEQKQYISAVQMYENCL 708

Query: 218 A---NYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
                Y +     E +  L  A      + E ++ +
Sbjct: 709 KKFYKYQNT----EVLLYLARALFKCGKLQECKQTL 740


>gi|220928054|ref|YP_002504963.1| hypothetical protein Ccel_0602 [Clostridium cellulolyticum H10]
 gi|219998382|gb|ACL74983.1| Tetratricopeptide TPR_2 repeat protein [Clostridium cellulolyticum
           H10]
          Length = 586

 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 67/219 (30%), Gaps = 37/219 (16%)

Query: 64  AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
             LF+    +S+A + F      +                A   +   +Y+ A +  ++ 
Sbjct: 332 GKLFMSVGQYSEASKVFKTYITINGVDYTGHY------NLAECYFENKEYKNAIAEYKQT 385

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           I+   +S       + +G+ Y +           T+  +     +++   N         
Sbjct: 386 ISLNQKSHES---LFKLGLIYDKTDE--------TEKAIDCYRAVIQLMPNFIDAYN-NL 433

Query: 181 YVTVGR-----NQLAAKEVEIG------RYYLKRGEYVAAIPRFQLVLANYSDA----EH 225
            +   +       LAA    I       R Y   G  +  I R++     ++ A      
Sbjct: 434 GIVFAKSQRHVESLAAYTAGIKLNPDNFRLYFNMGVVLFEIKRYEDSADAFARAVKLNPD 493

Query: 226 AEEAMARLVEAYVALALMDEA-REVVSLIQERYPQGYWA 263
            ++    L  +   L   DEA +     + E+  +G   
Sbjct: 494 DKDVYYYLGASLTELKQYDEAIKAYGRALDEKMEEGELY 532


>gi|114704715|ref|ZP_01437623.1| hypothetical protein FP2506_07261 [Fulvimarina pelagi HTCC2506]
 gi|114539500|gb|EAU42620.1| hypothetical protein FP2506_07261 [Fulvimarina pelagi HTCC2506]
          Length = 390

 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 35/97 (36%), Gaps = 9/97 (9%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
            ++ +   +A    VGW+R S        +       + Y  A   ++E +   A E F 
Sbjct: 31  VSVVLIVILATGAYVGWQRYS--------IAQANATGDRYLAAQDLVREGDIDGAIEAFR 82

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
             + D         + +  A  +  AG+ + A +  E
Sbjct: 83  AIAEDGS-GAYPELAQMSIANAEAEAGRNEDAIASYE 118


>gi|116052361|ref|YP_792672.1| hypothetical protein PA14_56210 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115587582|gb|ABJ13597.1| hypothetical protein PA14_56210 [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 268

 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 20/55 (36%), Gaps = 4/55 (7%)

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
            Y +G+ Y         DQR       Y  R+V  +  +   + A+  +   R +
Sbjct: 94  LYQIGLIYMSRYN----DQRDDAKATDYFQRVVREFPGTHAAEHAQARLLAMRQR 144


>gi|297273345|ref|XP_001115976.2| PREDICTED: cell division cycle protein 27 homolog isoform 1 [Macaca
           mulatta]
          Length = 790

 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 552 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 601

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178
           N    +Y +GM Y +  +     +   +  L    +          +      S      
Sbjct: 602 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 657

Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                V   +N L               +Y +A+   + +                + + 
Sbjct: 658 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 712

Query: 237 YVALALMDEA 246
           Y  L     A
Sbjct: 713 YKKLGQTHLA 722


>gi|291570132|dbj|BAI92404.1| probable transglycosylase [Arthrospira platensis NIES-39]
          Length = 730

 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 37/110 (33%), Gaps = 12/110 (10%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY--SAGKYQQAASLGEEYITQYPESK 128
            +   A +        +  +  A  + L     Q   +AG+   A+    + + + P+S+
Sbjct: 345 GSTETASQSRQLLLSQYSDSEAA--AQLRWTLAQQGATAGRLDIASEWARQLVNKNPDSE 402

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
                 +++G             Q  +K   +    ++ RY  S Y   A
Sbjct: 403 LAPQATFMLG--------RWARQQGNSKDATKAFEYLLARYPESYYAWRA 444



 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 64/214 (29%), Gaps = 33/214 (15%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-----FAGVARKSLLMSAFVQYSAGK 109
           +  R +Y  A          ++   + +    FP         A    +  A       +
Sbjct: 256 KTPRNMYRHARGLWLGGKIPESRRAYQELIAAFPTQTDPGGEDAGLGRIRLA----RLVE 311

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            ++A  L  + +  +P                 ++         +T+   Q    ++ +Y
Sbjct: 312 PREALPLLNQVVENFPNH--AAEAVLDRANVLDKL--------GSTETASQSRQLLLSQY 361

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
           ++S             R  LA +    GR          A    + ++    D+E A +A
Sbjct: 362 SDSEAAAQ-------LRWTLAQQGATAGRL-------DIASEWARQLVNKNPDSELAPQA 407

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
              L           +A +    +  RYP+ Y+A
Sbjct: 408 TFMLGRWARQQGNSKDATKAFEYLLARYPESYYA 441


>gi|291567424|dbj|BAI89696.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 806

 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 28/77 (36%), Gaps = 3/77 (3%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           SS D   + +       E+    +  +K++ + +A       +   P      K+ +   
Sbjct: 2   SSTDRSKEELNPDLNSLEL---GLAAIKQKQYQQAIALLEPIADSQPHTKAGLKAQIGLV 58

Query: 102 FVQYSAGKYQQAASLGE 118
                +G+  +A SL +
Sbjct: 59  KAYDRSGQSDRAISLCQ 75


>gi|291279941|ref|YP_003496776.1| hypothetical protein DEFDS_1561 [Deferribacter desulfuricans SSM1]
 gi|290754643|dbj|BAI81020.1| hypothetical protein [Deferribacter desulfuricans SSM1]
          Length = 249

 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 52/146 (35%), Gaps = 32/146 (21%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           G  + A    ++ I   P   N+  VYY +G++Y  M           +   +Y    + 
Sbjct: 109 GDLENAILNWKK-ILNDPTYPNIPLVYYNIGLAYYNMND--------YEEAKKYFKSSIR 159

Query: 168 RYTNSPYVKGARFYVTVGRNQ---LAAKE-----------------VEIGRYYLKRGEYV 207
               + +   +   +    N+   +A  E                 +++G +Y    +Y 
Sbjct: 160 A---NRFFVNSYLMLYEIYNKEMNMAEAEKILKKAVDNNPASRVLMLKLGEHYYNEKKYN 216

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARL 233
            A   F+ ++  +  +E A++A   L
Sbjct: 217 DAASVFEDIIIKFPKSEEAKKAATYL 242


>gi|284054414|ref|ZP_06384624.1| hypothetical protein AplaP_23478 [Arthrospira platensis str.
           Paraca]
          Length = 144

 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 28/77 (36%), Gaps = 3/77 (3%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           SS D   + +       E+    +  +K++ + +A       +   P      K+ +   
Sbjct: 2   SSTDRSKEELNPDLNSLEL---GLAAIKQKQYQQAIALLEPIADSQPHTKAGLKAQIGLV 58

Query: 102 FVQYSAGKYQQAASLGE 118
                +G+  +A SL +
Sbjct: 59  KAYDRSGQSDRAISLCQ 75


>gi|268326191|emb|CBH39779.1| conserved hypothetical secreted protein, containing
           tetratricopeptide repeats [uncultured archaeon]
          Length = 460

 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/189 (12%), Positives = 48/189 (25%), Gaps = 50/189 (26%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           K        I +  L+G             +     +++   +        N+  A   F
Sbjct: 2   KITRRTALGITLIVLIGLTSWG--------LAGALEEQQYINQGKDEYNRGNYDAAIYLF 53

Query: 81  NQCSRDFPFAGV----------------------ARKSLLMS----AF-----VQYSAGK 109
           N+     P                          ++   L S    A+       Y  G 
Sbjct: 54  NKAVELNPDNEYLYNDLGLCYVALDDSDLAIPEFSKAIELNSDCVEAYYNRGLAYYGQG- 112

Query: 110 YQQAASLGEEY---ITQYPESKNVDYVYYLVGMSYAQMIRD----VPYDQRATKLMLQYM 162
              A     ++   I   P + +    YY  G++Y + +R      P    +        
Sbjct: 113 TSGAPDAISDFTKAIELDPGNVD---AYYNRGLAYNKQVRGGEPFTPEHMESYGKARADF 169

Query: 163 SRIVERYTN 171
            +++E    
Sbjct: 170 DKVLELDPE 178


>gi|268317515|ref|YP_003291234.1| Tetratricopeptide TPR_4 [Rhodothermus marinus DSM 4252]
 gi|262335049|gb|ACY48846.1| Tetratricopeptide TPR_4 [Rhodothermus marinus DSM 4252]
          Length = 607

 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 47/126 (37%), Gaps = 7/126 (5%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +A L + +     A +  N   +D     +A    L+ A +    G+  +A +L  E+
Sbjct: 485 YAQARLLMAQNQPEAALDSLNVLQQDVGAHPIADDVTLLRARLLRRLGRPTEALALLLEF 544

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
             +YP S        L   S  +  R    D R     L   +R++  +  SP +   R 
Sbjct: 545 PLRYPRSP-------LRDQSLYEAARIQEEDLRDHAAALDTYTRLLTEFPGSPLIPEVRT 597

Query: 181 YVTVGR 186
            +   R
Sbjct: 598 RIRNLR 603


>gi|196232460|ref|ZP_03131313.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
           Ellin428]
 gi|196223532|gb|EDY18049.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
           Ellin428]
          Length = 792

 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 43/271 (15%), Positives = 75/271 (27%), Gaps = 50/271 (18%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
           T+    A+   VG    +   +      D  +   +   A   L      +A EY  +  
Sbjct: 39  TLHLLGALAQQVGRTEMAIEFMRQAIAADPNHAAALSNLAATLLAGGRAGEAAEYARRAV 98

Query: 85  RDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESKNVDYVYYLV 137
              P            A   Y+ G       + ++A +     +   P     +      
Sbjct: 99  EVAPG----------FADAHYNLGAVLAELGQMEEALASYRRALEIQPTHAVAE------ 142

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
                  + ++  + R     +    R ++      Y   A   + V  ++    +  I 
Sbjct: 143 -----NNLGNILRELRRLDEAIAAYRRAIQLQP--AYA-DAHNNLGVALSEQGKSDEAIA 194

Query: 198 RY-------------YLKRGEYVAAIPRFQLVLANY----SDAEHAEEAMARLVEAYVAL 240
            Y             +   G  + A  R+   +  Y      +    +    L EA V L
Sbjct: 195 AYGRALELKPDGNAVHANLGNALRASGRYAEAVVAYRRSLQSSPARLDICQGLGEALVLL 254

Query: 241 ALMDEAREVVSLIQERYPQGY--WARYVETL 269
              DEA EV  LI    P     WA     L
Sbjct: 255 GRFDEAGEVFRLIVRCNPDDPEAWASLANVL 285


>gi|171913013|ref|ZP_02928483.1| hypothetical protein VspiD_17575 [Verrucomicrobium spinosum DSM
           4136]
          Length = 866

 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/175 (13%), Positives = 62/175 (35%), Gaps = 41/175 (23%)

Query: 96  SLLMSAFVQYSAGKYQ-QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           S L+     + A K+   A +  ++++ ++P        +  + ++   ++ D+P   +A
Sbjct: 495 SQLLLEKALHLAAKHDPTAEAALQDFLREHPTHPRAVEAH--LALAELCLL-DIPVRAKA 551

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE--------------------- 193
             L L     I           G +  +   R  L   E                     
Sbjct: 552 ASLALDVAKEIPGL------ADGWKEKIDYTRVWL--YEAAEDFPALTKVGIQYLETWRT 603

Query: 194 --------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
                   +++ + Y +  ++  A  +F+ ++   +++ +AE A     +A +A+
Sbjct: 604 SQRRDQVRMKVAQAYYRMDDFTNAGTQFEELVEEQTESPYAEVAQFYAGKAALAM 658


>gi|172036154|ref|YP_001802655.1| hypothetical protein cce_1239 [Cyanothece sp. ATCC 51142]
 gi|171697608|gb|ACB50589.1| hypothetical protein cce_1239 [Cyanothece sp. ATCC 51142]
          Length = 155

 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 7/71 (9%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASL 116
           E+  ++  FL+  NF KA E   +  +++P FA    R+++L      +S  KY++A   
Sbjct: 42  ELLRRSQSFLEAGNFQKAEELLTETIKNYPDFAEAWNRRAVL-----YFSLEKYEKAKED 96

Query: 117 GEEYITQYPES 127
            ++ I   P  
Sbjct: 97  CQQVIRLIPYH 107


>gi|220922451|ref|YP_002497753.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
           nodulans ORS 2060]
 gi|219947058|gb|ACL57450.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
           nodulans ORS 2060]
          Length = 1022

 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 38/114 (33%), Gaps = 14/114 (12%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            +   F  +  + +A   +NQ  R  P + +A           Y  G Y++A +     +
Sbjct: 65  NRGFTFRSKGEYDRAIADYNQALRLDPRSVIAYN---NRGDAFYHKGDYERAIADYNRAL 121

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
              P+      VY   G ++        + +      +   ++ ++   N  + 
Sbjct: 122 QLDPKHPI---VYNNRGFAF--------HGKGEYDRAIADYNQALQLDPNYTFA 164


>gi|189426262|ref|YP_001953439.1| hypothetical protein Glov_3213 [Geobacter lovleyi SZ]
 gi|189422521|gb|ACD96919.1| Tetratricopeptide TPR_2 repeat protein [Geobacter lovleyi SZ]
          Length = 639

 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 63/210 (30%), Gaps = 17/210 (8%)

Query: 61  YEKAVLFLKE-----QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           Y +A L L +      N  +A E + +  +  P +       L  A +         A  
Sbjct: 374 YAEARLKLADIRLGRGNTQEAVEQYVEFLKLKPESA---DIHLKLARIFVKNKNLNLAEE 430

Query: 116 LGEEYITQYPESKNVDY---VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
             +  +   P++   +      Y    +  + +          +   +  + +V  Y   
Sbjct: 431 SYKAVLKLAPDNPEANRELAAVYRAKGATDKAVEHYTKALELQEEDNESRNALVAIYVKD 490

Query: 173 PYVKGARFYVTVGRNQL---AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
                    +          A    ++G  Y  + EY  AI  ++       D      A
Sbjct: 491 KKYDELAELLQEAVELAPDDANNHYKLGLIYDFKKEYDNAIASYKKAAELKPD---HARA 547

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQ 259
           +  L   Y+    + EARE +   ++  P 
Sbjct: 548 LHALGRVYMKTGRLSEAREALEAARKADPN 577


>gi|91203625|emb|CAJ71278.1| putative tpr repeat protein [Candidatus Kuenenia stuttgartiensis]
          Length = 647

 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 48/143 (33%), Gaps = 26/143 (18%)

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESK----NVDYVYYLVGMSYAQMIRDVPYDQRAT 155
             +  Y+ G   +A    E  I   P       N+   Y L GM            Q   
Sbjct: 434 LGYFYYNNGLIDKAIQAFEGSIQAMPTHPKAHSNLGAAYSLKGM------------QDKA 481

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY--LKRGEYVAAIPRF 213
              LQ+  R+ E+Y        A   + +   +    ++ I  Y   LK   Y A     
Sbjct: 482 IEELQFAVRLREQYP------EAHNNLGLLYKRKGMPDMAINEYVAALKTNPYYADAH-- 533

Query: 214 QLVLANYSDAEHAEEAMARLVEA 236
             + + Y D    EEA++ L +A
Sbjct: 534 NNLGSVYIDTGRYEEALSELEKA 556


>gi|85859751|ref|YP_461953.1| TPR repeat-containing protein [Syntrophus aciditrophicus SB]
 gi|85722842|gb|ABC77785.1| tetratricopeptide repeat family protein [Syntrophus aciditrophicus
           SB]
          Length = 277

 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 59/176 (33%), Gaps = 35/176 (19%)

Query: 61  YEKAVLFL-----KEQNFSKAYEYFNQCSRD--FPFAGVARKSLLMSAFVQYSAGKYQQA 113
           Y +A  FL       + + +A E F +   +  +     A        +  Y  G Y  A
Sbjct: 119 YSEAYNFLGVIYSSMEKWDQAIEAFEKALSNILYDTPAYAH---YNMGWAYYKKGDYGSA 175

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
               E  + Q P++ ++            + +  V   Q  T   L+++ + +       
Sbjct: 176 LKQYELALVQDPDTVDLP--------LLEKNMGIVLLAQGRTADALKHLQKSIALMP--- 224

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
                          LA     +GR Y+++     A   FQ V+    D E AE++
Sbjct: 225 --------------SLAESHYWLGRCYIEQKNLEKAEAAFQQVMKLAPDTEWAEKS 266



 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/125 (11%), Positives = 41/125 (32%), Gaps = 11/125 (8%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y     + K+ ++  A + +       P              V  + G+   A    ++ 
Sbjct: 160 YNMGWAYYKKGDYGSALKQYELALVQDPDTVDLPLLEKNMGIVLLAQGRTADALKHLQKS 219

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           I   P   ++   +Y +G  Y +        Q+  +       ++++   ++ + + +R 
Sbjct: 220 IALMP---SLAESHYWLGRCYIE--------QKNLEKAEAAFQQVMKLAPDTEWAEKSRG 268

Query: 181 YVTVG 185
            +   
Sbjct: 269 KIEEL 273



 Score = 35.9 bits (82), Expect = 7.0,   Method: Composition-based stats.
 Identities = 39/299 (13%), Positives = 87/299 (29%), Gaps = 88/299 (29%)

Query: 5   LGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKA 64
           + R + I   WA+      + +  S+A C    W ++ +                     
Sbjct: 19  MSRKLSIITLWAW------IGLIISVAGCATSPWNQEQADIHM--------------NIG 58

Query: 65  VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ-AASLGEEYITQ 123
             +++   ++ A +   Q  +         +     A   Y      Q A +  ++ +  
Sbjct: 59  NAYIQSGKYNSALKELLQAKKL---GKPNPRVHYSLAVSYYYGKGLNQLAIAELKKAVNL 115

Query: 124 YPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + DY   Y  +G+ Y+ M +   +DQ      ++   + +               
Sbjct: 116 -----DTDYSEAYNFLGVIYSSMEK---WDQ-----AIEAFEKALS-------------- 148

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA------------------ 223
             +  +  A     +G  Y K+G+Y +A+ +++L L    D                   
Sbjct: 149 -NILYDTPAYAHYNMGWAYYKKGDYGSALKQYELALVQDPDTVDLPLLEKNMGIVLLAQG 207

Query: 224 ----------------EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
                               E+   L   Y+    +++A      + +  P   WA   
Sbjct: 208 RTADALKHLQKSIALMPSLAESHYWLGRCYIEQKNLEKAEAAFQQVMKLAPDTEWAEKS 266


>gi|332663484|ref|YP_004446272.1| hypothetical protein Halhy_1507 [Haliscomenobacter hydrossis DSM
           1100]
 gi|332332298|gb|AEE49399.1| Tetratricopeptide TPR_1 repeat-containing protein
           [Haliscomenobacter hydrossis DSM 1100]
          Length = 259

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/104 (14%), Positives = 39/104 (37%), Gaps = 13/104 (12%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL-LMSAFVQYSAG 108
           ++   +   ++ ++A    ++ N+  A + + +       AG    +L        + AG
Sbjct: 25  NLAAAQSPTQIAQQAQESYQQGNYPAAVQAYKKLIA----AGYHNAALSFNLGNACFRAG 80

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
           K  +A    E+ +   P  +          ++  +++R    DQ
Sbjct: 81  KLGEAVLYYEKALALKPNDEAT--------LANLELVRGELTDQ 116


>gi|323189323|gb|EFZ74606.1| cellulose synthase operon protein C [Escherichia coli RN587/1]
          Length = 1157

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 78/236 (33%), Gaps = 36/236 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197
             Q +       +  +V R   S  V      +   G+   A             ++ + 
Sbjct: 557 RAQWS-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 611 DWAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 663



 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + ++ P      Y   L
Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537


>gi|312130253|ref|YP_003997593.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132]
 gi|311906799|gb|ADQ17240.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132]
          Length = 657

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/119 (11%), Positives = 45/119 (37%), Gaps = 18/119 (15%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLL--MSAFVQYSAGKYQQAASLG 117
           Y++ +   +  +++ A   F++ +   P +     ++ L   +        ++ ++    
Sbjct: 25  YKRGLASFENGHYNLAIREFSKVTELDPLY-----QADLLKKTGDAFRLTNRWAESIPYY 79

Query: 118 EEYITQ-YPESK---NVDYVY-----YLVGMSYAQMI-RDVPYDQRATKLMLQYMSRIV 166
           E+ +    P S+    + Y +     Y     Y     R  P D+   + + + ++ ++
Sbjct: 80  EKVLALPNPASEIYYYLGYAHKSKGEYQKAKEYFSAFARTNPSDRVLAEKVQRELNALL 138


>gi|297182130|gb|ADI18303.1| FOG: tpr repeat-protein [uncultured Chromatiales bacterium
           HF0200_41F04]
          Length = 197

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 8/71 (11%), Positives = 25/71 (35%), Gaps = 7/71 (9%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASL 116
           ++  +A   + +++F  +    ++     P FA    ++++       Y    Y  +   
Sbjct: 77  QIMRRAQTAMDKRDFKSSIRLLDKLVAHAPKFAEAWNQRAI-----ALYLVADYDASLRD 131

Query: 117 GEEYITQYPES 127
             + +   P  
Sbjct: 132 INQTLALEPRH 142


>gi|288942420|ref|YP_003444660.1| TPR repeat-containing protein [Allochromatium vinosum DSM 180]
 gi|288897792|gb|ADC63628.1| Tetratricopeptide TPR_2 repeat protein [Allochromatium vinosum DSM
           180]
          Length = 660

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 44/111 (39%), Gaps = 12/111 (10%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++ + +   +E +  +A        R  P      ++ LM+ ++    G+ ++A +L   
Sbjct: 510 LFRRYLAQAQEGHSEEARRTLETLLRLNPQDNHGARAELMNLYL--RDGEDERALALARR 567

Query: 120 YITQYPESKNVDYVYYLVG--MSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +    P+    D  Y   G  ++  ++ R+    +   K  ++ + RI   
Sbjct: 568 F----PDDLLADLAY---GEVLALYRLGRE-ERARTVLKTAIRRLPRIPRY 610


>gi|283850638|ref|ZP_06367925.1| cell wall hydrolase/autolysin [Desulfovibrio sp. FW1012B]
 gi|283573881|gb|EFC21854.1| cell wall hydrolase/autolysin [Desulfovibrio sp. FW1012B]
          Length = 382

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 21/73 (28%), Gaps = 3/73 (4%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
               E+  +    L + N +KA     +     P      +   +     +  G  +QA 
Sbjct: 27  DSADELANQGQDALNDGNPAKALPILLEAQAKDPRND---RVEALLGRAYFQQGDARQAL 83

Query: 115 SLGEEYITQYPES 127
                 +   PE 
Sbjct: 84  HHFTAAVRLNPED 96


>gi|258619927|ref|ZP_05714968.1| fimbrial biogenesis and twitching motility protein, putative
           [Vibrio mimicus VM573]
 gi|258587797|gb|EEW12505.1| fimbrial biogenesis and twitching motility protein, putative
           [Vibrio mimicus VM573]
          Length = 136

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 47/110 (42%), Gaps = 10/110 (9%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
           FAL + F+++ C  V    +++       + + R         + +L+  +  KA E   
Sbjct: 5   FALGVLFALSGCVTVTETSEAAAQSNPTEMAEARIAL-----GLGYLENGSMIKARENLE 59

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSA-GKYQQAASLGEEYITQYPESKNV 130
           +  +  P +    +S L  A   + A G+   A  + +  + Q+P++ NV
Sbjct: 60  KALQHAP-SYY--RSQLSMAH-YFEAVGESDSARKMYQTALNQHPKNGNV 105


>gi|197120080|ref|YP_002140507.1| TPR domain-containing protein [Geobacter bemidjiensis Bem]
 gi|197089440|gb|ACH40711.1| TPR domain protein [Geobacter bemidjiensis Bem]
          Length = 405

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 67/207 (32%), Gaps = 30/207 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
              + + +++++++A     +     P      ++    A    + GK  +A    +  +
Sbjct: 34  SSGLGYYQKKDYARATGELKRAISMDPTN---TQAYKFLASAYQAQGKTDEAIKTYKNSL 90

Query: 122 TQYPE----SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ-------YMSRIVERYT 170
              P       N+       G  Y Q  +     +R  K   +           + + Y 
Sbjct: 91  ALDPTQDSIHTNL-------GNIYLQQ-KKYNLAEREFKDAAKLNPTDTLAPYTLGQLYV 142

Query: 171 NSPYVKGARFYVTVGRNQLAAKE----VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
            +     A        +++A  +      +G  Y K G+Y  A+ +    +      E A
Sbjct: 143 QTERYGEAETQFKKV-SRMAPTDPNPYYSLGAVYNKEGKYADAVKQLTQAVKLRPKMEAA 201

Query: 227 EEAMARLVEAYVALALMDEAREVVSLI 253
                 L  AY AL     A++ V+ +
Sbjct: 202 H---FELGVAYAALGDTTNAQKEVNTL 225


>gi|197118348|ref|YP_002138775.1| TPR domain-containing protein [Geobacter bemidjiensis Bem]
 gi|197087708|gb|ACH38979.1| TPR domain protein [Geobacter bemidjiensis Bem]
          Length = 188

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/157 (12%), Positives = 49/157 (31%), Gaps = 14/157 (8%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + +   T    + V  L   +             +     + +E  VL   E  + +A E
Sbjct: 1   MRQATGTYVMLLLVAGLATGDLDPKPQRQPIDQEEYLEADDWFEAGVLMNSEGRYGEAAE 60

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            F++     P   V+    L     Q     Y +A    +  I   P+          + 
Sbjct: 61  AFSKSIALSPGNAVS---WLNLGTAQALTADYPRAIESLKRSIALDPK----------LA 107

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
           ++++ +        R  +  ++  + ++E +  +   
Sbjct: 108 LAFSNLGEVCFRIYRY-EEAVEAYTYLLELWPGNANA 143


>gi|91202926|emb|CAJ72565.1| hypothetical protein kustd1820 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 645

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 71/202 (35%), Gaps = 38/202 (18%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
                 +A + F+   R   F   A  +           G +++A +  ++ +   P+  
Sbjct: 433 DSGRLDEAIDEFHHALRL--FENYAE-AHNNLGITYRKKGMHEEAYNEYQKALQLNPDYP 489

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +   V+  +G+ Y ++ R          L ++   R ++          ++   +   N 
Sbjct: 490 D---VHNNLGVLYTKINRS--------DLAMEEFKRAIK----------SKQMYSDAHNN 528

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-R 247
           L       G  Y   GE   AI  F+  +++  D     +A A L  AY+   + DEA +
Sbjct: 529 L-------GILYAYTGELDLAIESFKNAISSRPD---HPDAYANLGTAYLKKGMYDEAIQ 578

Query: 248 EVVSLIQERYPQGYWARYVETL 269
           + +  I        + +    L
Sbjct: 579 QFLKAISY---DNQYVKAYYYL 597



 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 10/76 (13%), Positives = 27/76 (35%), Gaps = 9/76 (11%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
            +          +LK+  + +A + F +       +       K+    +   ++ G+Y+
Sbjct: 555 DHPDAYANLGTAYLKKGMYDEAIQQFLKAISYDNQY------VKAYYYLSTAYWNKGQYE 608

Query: 112 QAASLGEEYITQYPES 127
           +AA      ++  P  
Sbjct: 609 KAAETCRRILSIDPTH 624


>gi|27365657|ref|NP_761185.1| Flp pilus assembly protein TadD [Vibrio vulnificus CMCP6]
 gi|27361805|gb|AAO10712.1| Flp pilus assembly protein TadD [Vibrio vulnificus CMCP6]
          Length = 246

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 51/177 (28%), Gaps = 37/177 (20%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           KFA  +  S+    LVG    +S+               +   A    +   +  A   +
Sbjct: 2   KFASKLILSVVSILLVGCAAPASQ----------PSAESLNSLADTAFEYARYDSAKSKY 51

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE-------------YI----TQ 123
            Q    +P    AR   LM A +     +   A S  ++             +I      
Sbjct: 52  QQVLDVYPEQPHAR---LMLARIDLLQDRPHAAQSQLQQLLTEKADNAAEAAFILGRYQL 108

Query: 124 YPESKNVDYVYYLVGMSYAQMIRD------VPYD-QRATKLMLQYMSRIVERYTNSP 173
                     Y   G++  +          +  D Q+ T    Q+  R +E   +S 
Sbjct: 109 NQGDALSASNYLQQGLALDEQHAGLHNLLAIALDEQQRTAQAKQHFLRAMELEPDSK 165


>gi|86134824|ref|ZP_01053406.1| conserved hypothetical protein [Polaribacter sp. MED152]
 gi|85821687|gb|EAQ42834.1| conserved hypothetical protein [Polaribacter sp. MED152]
          Length = 601

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 39/92 (42%), Gaps = 12/92 (13%)

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           ++ L+         ++ +A +  E+ I    +S  VD +Y+L+  +Y   + D       
Sbjct: 518 QAKLLI-----KEDRFLEAIASLEKIIAADNQSFLVDDIYFLMAETYNYQLND------- 565

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
            +   ++  +I+  + +S Y+  AR      R
Sbjct: 566 AEKAKEFYQKIIFDHPSSIYLVEARKKFRKLR 597


>gi|325269998|ref|ZP_08136607.1| hypothetical protein HMPREF9141_1817 [Prevotella multiformis DSM
           16608]
 gi|324987721|gb|EGC19695.1| hypothetical protein HMPREF9141_1817 [Prevotella multiformis DSM
           16608]
          Length = 1130

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 20/50 (40%)

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
            + V  +Y D E  ++    L   Y+       A   V+ +  +YP+  W
Sbjct: 617 LRRVSDDYPDYEQMDDVYYHLYLLYMRKGDQQMADSYVARLSRKYPKSKW 666


>gi|182415050|ref|YP_001820116.1| tetratricopeptide TPR_4 [Opitutus terrae PB90-1]
 gi|177842264|gb|ACB76516.1| Tetratricopeptide TPR_4 [Opitutus terrae PB90-1]
          Length = 514

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 43/122 (35%), Gaps = 21/122 (17%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y +AVL L + ++  A     +     P ++     + L  A +Q   G+ + A    + 
Sbjct: 36  YYRAVLRLADNDYDAATTLLRETLSRAPDYSP----AYLQLANLQLKTGELEGAERDYQR 91

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN-----SPY 174
            +   P      Y    +G+    ++R      + T      +  +++   N     S Y
Sbjct: 92  RLALVPRDP---YA--RLGLVRLALLR------QRTGEARGLLEELLKDAPNFSTAHSLY 140

Query: 175 VK 176
            +
Sbjct: 141 AE 142


>gi|169826087|ref|YP_001696245.1| hypothetical protein Bsph_0490 [Lysinibacillus sphaericus C3-41]
 gi|168990575|gb|ACA38115.1| hypothetical protein Bsph_0490 [Lysinibacillus sphaericus C3-41]
          Length = 343

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 28/77 (36%), Gaps = 7/77 (9%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
           + +S  +      +     +++YE+ +    E   S+A E  N+ +     +    KS  
Sbjct: 150 DIESDDNPLTTQESKDDRDKQIYEEGLTAYNEGRTSEAVEALNKINGK---SEYYEKSQE 206

Query: 99  MSAF----VQYSAGKYQ 111
           M       + +   KY 
Sbjct: 207 MLKDIDKKIYWENIKYP 223


>gi|114686933|ref|XP_001137102.1| PREDICTED: tetratricopeptide repeat protein 38 isoform 2 [Pan
           troglodytes]
          Length = 469

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 45/150 (30%), Gaps = 29/150 (19%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQ----------REVYEKAVLFLKEQNFSKAYE 78
                 L+G       D  LD       +           +++  AV      NF KA E
Sbjct: 70  IATGLVLIGTGSSVKLDKELDLAVKTMVEISRTQPLTRREQLHVSAVETFANGNFPKACE 129

Query: 79  YFNQCSRDFPFAGVARKSLLMSA-----FVQYSAGKYQQAASLGEEYITQYPE-SKNVDY 132
            + Q  +D P          M A        +  G  +Q           YP  + ++  
Sbjct: 130 LWEQILQDHPTD--------MLALKFSHDAYFYLGYQEQMRDSVAR---IYPFWTPDIPL 178

Query: 133 VYYLVGMSYAQMIRDVPYDQ--RATKLMLQ 160
             Y+ G+    ++    YD+  +  K  L 
Sbjct: 179 SSYVKGIYSFGLMETNFYDRAEKLAKEALS 208


>gi|325295621|ref|YP_004282135.1| hypothetical protein Dester_1446 [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325066069|gb|ADY74076.1| Tetratricopeptide TPR_1 repeat-containing protein
           [Desulfurobacterium thermolithotrophum DSM 11699]
          Length = 341

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 21/62 (33%), Gaps = 3/62 (4%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
             A+  L   N  +A   F +    +PF     +     A      G Y++A    E ++
Sbjct: 252 NLAISLLGSGNIDEAILEFQKLKNKYPFLP---EIYYNEAVAYLKKGYYKKAIEDFEIFL 308

Query: 122 TQ 123
             
Sbjct: 309 EL 310


>gi|313205816|ref|YP_004044993.1| tpr repeat protein [Riemerella anatipestifer DSM 15868]
 gi|312445132|gb|ADQ81487.1| TPR repeat protein [Riemerella anatipestifer DSM 15868]
 gi|315022788|gb|EFT35812.1| TPR repeat protein [Riemerella anatipestifer RA-YM]
 gi|325336744|gb|ADZ13018.1| putative tetratricopeptide TPR_2 repeat protein [Riemerella
           anatipestifer RA-GD]
          Length = 461

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 43/116 (37%), Gaps = 14/116 (12%)

Query: 57  QREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           ++E+YE  A L +  + +  A    ++  + FP +   + S L      Y +GK  +  +
Sbjct: 262 EQELYETNAALLIDSEKYDDALVLLDKGIKKFPKSN--KLSEL-QGTAYYKSGKTNEFVN 318

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
             ++ +   P  K          +S+  +   +  D+           R +E   +
Sbjct: 319 NLKKQLEANPNDK----------VSWYNLGVLLSKDEAKLNEAEGAFKRALEIDPD 364


>gi|311695030|gb|ADP97903.1| tetratricopeptide TPR_2 repeat protein [marine bacterium HP15]
          Length = 169

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 50/152 (32%), Gaps = 24/152 (15%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           + KAV  ++E N ++A   F Q + D+P     +A         + +     + A S  E
Sbjct: 22  FAKAVSAMEEGNLAEAKTRFEQLASDYPGKAGPMA-----NLGIIAFQEEDTETAKSWFE 76

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
             +T  PE         +  +++  +I     +         Y    +    N  Y   A
Sbjct: 77  RTLTVNPEH--------VQALNHLGVI---ARNAGEFDEAEGYYRAALSADPN--YAP-A 122

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
              +    +    K  E    Y +   Y +A 
Sbjct: 123 ILNLAFLLDIYLGKPAEAVDLYER---YQSAA 151


>gi|298241367|ref|ZP_06965174.1| transcriptional regulator, XRE family [Ktedonobacter racemifer DSM
           44963]
 gi|297554421|gb|EFH88285.1| transcriptional regulator, XRE family [Ktedonobacter racemifer DSM
           44963]
          Length = 850

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 32/232 (13%), Positives = 70/232 (30%), Gaps = 46/232 (19%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF--------PFAGVARKSLLMSAFV 103
              +  + + + A + ++   F +A E + +    +        P    A        F+
Sbjct: 562 EHPQTAKALQQWAFIHIELGKFGEALELYQRVLALYERVVAKDDP--DWAETFD-NLGFL 618

Query: 104 QYSAGKYQQAASLGEEYITQY-----PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
            Y  G+Y QA    +  +        PE  +   V   + ++Y +  R     +R     
Sbjct: 619 YYCQGRYTQAEHYYQRALDLSRQISGPEHPDTANVLNNLALTYIKQERYAEC-ERIYGQA 677

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
           L    R +               +   +N        +   YL++  Y  A   F  VL 
Sbjct: 678 LAIYHRTL--------GAEHSHTINALQN--------VALVYLRQRRYEEAEEHFLRVLR 721

Query: 219 NYSD--------AEHAEE---AMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           +  +        +  A     ++     AY         ++ +++ +   P 
Sbjct: 722 SLQENDLTNPTISSAAHRNLGSLYLDQRAYQQAEFHL--QQALAIHERNLPS 771


>gi|257464360|ref|ZP_05628737.1| Tetratricopeptide TPR_2 repeat protein [Fusobacterium sp. D12]
          Length = 185

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 34/76 (44%), Gaps = 8/76 (10%)

Query: 70  EQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           ++++  A  +F +  +                A+V Y   KY++A    E+ +   P S 
Sbjct: 51  KKDYDMAVYFFEKLMKLDATNGNWPGF----LAYVYYEQEKYKKAIPYFEKSVDLSPNSP 106

Query: 129 NVDYVYYLVGMSYAQM 144
            +   Y+L+G SY+++
Sbjct: 107 FI---YFLLGNSYSRL 119


>gi|160903365|ref|YP_001568946.1| TPR repeat-containing protein [Petrotoga mobilis SJ95]
 gi|160361009|gb|ABX32623.1| Tetratricopeptide TPR_2 repeat protein [Petrotoga mobilis SJ95]
          Length = 1911

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 57/182 (31%), Gaps = 28/182 (15%)

Query: 61   YEK-AVLFLKEQNFSKAYEYFNQCSRDF-P--------------FAGVARKSLLMSAFVQ 104
            Y + A L +   N+  A + + +  + + P                  ++ + L      
Sbjct: 1716 YSQLAKLQMTSGNWWNAIKAYEEALKVYIPQRDSRDYAMVKKNLGDAYSQLAKLQMT--- 1772

Query: 105  YSAGKYQQAASLGEEYITQY-PESKNVDYVYYLVGMSY-AQMIRDVPYDQRATKLMLQYM 162
              +G +  A    EE +  Y P+  + DY      +      + DV       +  ++  
Sbjct: 1773 --SGNWWNAIKAYEEALKVYIPQRDSRDYAIVQKNLGDAYIKLADVETTSENFENAIKAY 1830

Query: 163  SRIVERYTNSPYVKG---ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
               ++ YT   Y       +  +    +QLA  E     +      Y  A+  F+     
Sbjct: 1831 EEALKVYTPQQYQGDYATVKENLGDAYSQLAKLEAASENWKNALKAYKEALKIFKE--EK 1888

Query: 220  YS 221
            + 
Sbjct: 1889 FP 1890


>gi|258572182|ref|XP_002544853.1| serine/threonine-protein phosphatase 5 [Uncinocarpus reesii 1704]
 gi|237905123|gb|EEP79524.1| serine/threonine-protein phosphatase 5 [Uncinocarpus reesii 1704]
          Length = 478

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 32/232 (13%), Positives = 73/232 (31%), Gaps = 54/232 (23%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSR--DFPFAGVARKSLLMSAFVQYSAG 108
            D+     +  +      + ++  A +++     +    P +    ++            
Sbjct: 4   ADIEAATALKVQGNKAFAKHDWPGALDFYTQAIEKYDQDP-SFWCNRAQ-----ANIKLE 57

Query: 109 KYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
            Y  A +   + I   P      Y   Y+   ++   ++        + +  L+    +V
Sbjct: 58  AYGYAIADATKAIELDPS-----YVKAYWRRAIANTAIL--------SYREALRDFKAVV 104

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
           ++  N      A+  +                  ++R E+  AI   +           A
Sbjct: 105 KKAPNDR---DAKLKLAECEKL------------VRRIEFEKAIEVAE--------PPSA 141

Query: 227 EEAMAR----LVEAYVALALMDE-AREVVSLIQERYPQGYW--ARYVETLVK 271
            E +      + E Y  +AL DE  +E +  + ER+  G     +Y   +VK
Sbjct: 142 FEGLDIDAIKVEETYDGVALGDEMTQEFIDDMIERFKNGKKIHKKYAYKIVK 193


>gi|229496266|ref|ZP_04389986.1| putative TPR domain protein [Porphyromonas endodontalis ATCC 35406]
 gi|229316844|gb|EEN82757.1| putative TPR domain protein [Porphyromonas endodontalis ATCC 35406]
          Length = 1009

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 72/220 (32%), Gaps = 41/220 (18%)

Query: 61  YEKAVLFLKEQNFSKAYEYF---------NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           Y           +++A  YF             +   +              QY+     
Sbjct: 513 YYLGYALFNGGRYAEAKGYFASSVHDSKQGALRQSDAYTR--------LGDCQYATNALD 564

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            A +  E  I+  P S++ D       +     I  +   ++     +  + R++  + +
Sbjct: 565 AAFASYERAISLAP-SQSSD------ALLRLAEINGL---RKQYSRQIALLDRLITSFPD 614

Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
           SP    A                + GR YL +G   AA   F    + YS +E    A+ 
Sbjct: 615 SPAAAQAS--------------YQKGRAYLLQGNNDAAEKAFVATASQYSQSEEGRLALL 660

Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           +L   Y     ++++ +  + +  RYP+   A    T +K
Sbjct: 661 QLALLYYNTQRVEKSLDTYTQLMHRYPKSAEAATAFTHLK 700



 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 38/91 (41%), Gaps = 1/91 (1%)

Query: 45  DVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           D  + S  D     +  Y+K   +L + N   A + F   +  +  +   R +LL  A +
Sbjct: 606 DRLITSFPDSPAAAQASYQKGRAYLLQGNNDAAEKAFVATASQYSQSEEGRLALLQLALL 665

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
            Y+  + +++     + + +YP+S      +
Sbjct: 666 YYNTQRVEKSLDTYTQLMHRYPKSAEAATAF 696


>gi|262193681|ref|YP_003264890.1| FecR protein [Haliangium ochraceum DSM 14365]
 gi|262077028|gb|ACY12997.1| FecR protein [Haliangium ochraceum DSM 14365]
          Length = 512

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/139 (14%), Positives = 36/139 (25%), Gaps = 40/139 (28%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG------- 108
              E+Y  A   + +   ++A          +P       +L+      Y  G       
Sbjct: 353 TAEELYRDAETAMGKGESARARSLLRALLGRYP-----DDALVDV--AHYELGRMAFDAA 405

Query: 109 KYQQAA----SLGEE-----YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
            Y +A     ++ E      ++   P         YL           V           
Sbjct: 406 DYARARRHLGAVVERGRDPVFLE--P-------AAYLR--------CRVELADARASAAR 448

Query: 160 QYMSRIVERYTNSPYVKGA 178
           Q +    +R+  SP    A
Sbjct: 449 QCLRGFRDRFPRSPSDAEA 467


>gi|189425029|ref|YP_001952206.1| hypothetical protein Glov_1970 [Geobacter lovleyi SZ]
 gi|189421288|gb|ACD95686.1| hypothetical protein Glov_1970 [Geobacter lovleyi SZ]
          Length = 348

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 26/62 (41%)

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           A+  + LVL  Y +   AE A+    +    +   D+A+         YPQG      ET
Sbjct: 282 ALAEYLLVLEEYPNLPQAEFALFNAAQTLAEMGFNDQAKLRFEQYLRLYPQGKQRSNAET 341

Query: 269 LV 270
           L+
Sbjct: 342 LL 343


>gi|158338601|ref|YP_001519778.1| TPR domain-containing protein [Acaryochloris marina MBIC11017]
 gi|158308842|gb|ABW30459.1| TPR domain protein [Acaryochloris marina MBIC11017]
          Length = 287

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 76/237 (32%), Gaps = 57/237 (24%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQRE---VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG- 91
            G    ++ +           + +   ++  A+    + NF+KA +Y+ +     P    
Sbjct: 26  GGHPAFAAPEQSTPPAYTAEIETQVENLFNAAMEATNKGNFAKAEQYWTEALDFLPNNPA 85

Query: 92  -VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL------VGMSYAQM 144
             + +          S GK++ A    +  +   PE  +     YL       G++    
Sbjct: 86  IWSNRGNSKI-----SQGKFEAALVDYDRSVELAPEQPDA----YLNRGAVQEGLAN--- 133

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
                      +  +   ++++E          A  Y   G N  A            +G
Sbjct: 134 ----------WEAAIADYNKVIELDPK-----EAAAYNNRG-NAKAG-----------QG 166

Query: 205 EYVAAIPRFQLVLANYSDAEHAE--EAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           ++ AA+  F+  +        A    A+A        +   DEA + +  +  +YPQ
Sbjct: 167 DWNAALTDFETAMELSPQFAFARGNYALAL-----YQVGERDEAIKTMRNLVRKYPQ 218


>gi|56421604|ref|YP_148922.1| hypothetical protein GK3069 [Geobacillus kaustophilus HTA426]
 gi|56381446|dbj|BAD77354.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
          Length = 490

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 37/100 (37%), Gaps = 15/100 (15%)

Query: 48  LDSVTDVRYQREVY---EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAF 102
           LD       + ++    ++A   L+E+ F++A E        +P  ++          A 
Sbjct: 138 LDGSEWTEEEEQLMVLEDRARRLLEEERFAEAIEALEALVVRYPDVWSAHN-----NLAL 192

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNV-----DYVYYLV 137
             + +G   +A     E + + P + +       + YYL 
Sbjct: 193 AYFYSGDVDKAKQKVREVLKRDPGNLHALCNALVFAYYLR 232


>gi|332018277|gb|EGI58882.1| RNA polymerase II-associated protein 3 [Acromyrmex echinatior]
          Length = 504

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 34/99 (34%), Gaps = 17/99 (17%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREV---YEKAVLFLKEQN-------FSKAYEYFNQCSRD 86
             ++    +   +S  +   + E+   Y KA+ + ++ N       + KA   +++  + 
Sbjct: 99  ACKKLEDEEQSDESSDEPLSKEELEKNYSKAIEYKQQGNDFVKQKKWDKAIASYSEAIKL 158

Query: 87  FPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           FP+     A ++L               A +     I  
Sbjct: 159 FPYDAIFYANRAL-----CYLKQDNLYSAEADCSSAIQL 192


>gi|294678710|ref|YP_003579325.1| hypothetical protein RCAP_rcc03194 [Rhodobacter capsulatus SB 1003]
 gi|294477530|gb|ADE86918.1| conserved hypothetical protein [Rhodobacter capsulatus SB 1003]
          Length = 276

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 45/134 (33%), Gaps = 14/134 (10%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA-AS 115
           ++  +++A   L + +F  A + F   +  +P   +   +  +       AG    A  +
Sbjct: 153 EQADFDRAKGVLDQGDFRAAADLFKTFAETYPGGPLTGDAGYLRGEALMKAGDVPGAPRA 212

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
             + + +  PE K        +G +   + R               ++ +  R+  S   
Sbjct: 213 WLDGF-SAEPEGKRAADDLLELGKALGTLGRKT--------EACATLTEVPARFPGSE-- 261

Query: 176 KGARFYVTVGRNQL 189
             AR  V   +  L
Sbjct: 262 --ARGKVAAAQASL 273


>gi|261250852|ref|ZP_05943426.1| TPR domain protein in aerotolerance operon [Vibrio orientalis CIP
           102891]
 gi|260937725|gb|EEX93713.1| TPR domain protein in aerotolerance operon [Vibrio orientalis CIP
           102891]
          Length = 714

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 29/84 (34%), Gaps = 15/84 (17%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCS----RDFPFAGVA--------RKSL---LMSAFVQYS 106
           ++A     +  F+ A E F          +     +         +SL      A     
Sbjct: 349 QQAKQLFDQGKFADAAERFTDQQWKGVSQYQNQNYSDAIETLKNEQSLDGRYNLANAYAQ 408

Query: 107 AGKYQQAASLGEEYITQYPESKNV 130
            G+  +AA + +E + Q P+ ++ 
Sbjct: 409 NGQLDKAAEIYQEILKQAPQHQDA 432


>gi|71907572|ref|YP_285159.1| TPR repeat-containing protein [Dechloromonas aromatica RCB]
 gi|71847193|gb|AAZ46689.1| TPR repeat:Tetratricopeptide TPR_4 [Dechloromonas aromatica RCB]
          Length = 952

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 36/99 (36%), Gaps = 6/99 (6%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           L      R ++ +   A+      +  KA EY +      P + +  K LL S +    A
Sbjct: 317 LPPAWLARREQLLMAAALAHYGLGSHEKAREYLDALIARSP-SNLGAKKLLASIYA--DA 373

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
             Y +A +L E      P+      V YL+G       R
Sbjct: 374 KDYGRAQTLLESLQRATPDDPQ---VMYLLGTVNLAQRR 409


>gi|114320406|ref|YP_742089.1| type IV pilus biogenesis/stability protein PilW [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114226800|gb|ABI56599.1| type IV pilus biogenesis/stability protein PilW [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 252

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 39/277 (14%), Positives = 77/277 (27%), Gaps = 75/277 (27%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
             L +   +  C  +G      RD  ++  T +          + +L+E  + +A     
Sbjct: 11  LILFLAVGVVGCGTMGQSGSGDRDRAVEVNTQL---------GLGYLQEGEYEEANRRLE 61

Query: 82  Q---CSRDFPFAGVARKSLL-------MSAFVQYS-----AGKYQQAASLGEEYI----- 121
           +     R +     A  +LL         A   Y       G+     +    ++     
Sbjct: 62  RALDIDRRYA-PAHAAMALLQEQLGQPEEAGRHYRRAVRLDGENASTRNNYGRFLCEQGD 120

Query: 122 --------------TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
                           Y  + ++       G+   +        +   +    Y  R + 
Sbjct: 121 LDRALDQFEAALDNPLY-RNPHIPLAN--AGVCLMR--------EGQHERAEDYFLRSLR 169

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
              N+ +   A   +   R Q    E      YL R  Y A             +A+H  
Sbjct: 170 E--NARFAP-ALLRMAQLRFQAGDHE--GAEEYLNR--YRA-------------EAQHTP 209

Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
            ++   V+   A+   D        ++ R+P    AR
Sbjct: 210 ASLWLGVQLARAVGDADAEASYGLSLRNRFPDSREAR 246


>gi|325119752|emb|CBZ55305.1| Peptidylprolyl isomerase D (Cyclophilin D),related [Neospora
           caninum Liverpool]
          Length = 578

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/153 (12%), Positives = 44/153 (28%), Gaps = 29/153 (18%)

Query: 42  SSRDVYLD--SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
           S +D   D     D+   +  Y + +  LK+ +F  A       +               
Sbjct: 69  SCKDAGNDVFKSGDIAAAKAKYTEGLKQLKDLDFGDAKRLRVALNS-------------N 115

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
            A     A  + +A +     + + PE+       Y  G++ +                 
Sbjct: 116 VAMCCIKAEDWSEAIAAANAVLEEEPENVK---ALYRRGVARSAF--------GFYGEAK 164

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
             + ++      +     AR  +   + ++A  
Sbjct: 165 ADLLQVARLDPKN---ADARKELEKVKERIAKH 194


>gi|315636306|ref|ZP_07891556.1| TPR repeat-containing protein [Arcobacter butzleri JV22]
 gi|315479395|gb|EFU70078.1| TPR repeat-containing protein [Arcobacter butzleri JV22]
          Length = 688

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 48/121 (39%), Gaps = 13/121 (10%)

Query: 4   VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV--- 60
           +L   + IF+   Y++  F + IF SI        E Q       + + D +   E+   
Sbjct: 1   MLLFRMEIFKKLVYKIL-FGIFIFNSILYANNDLLESQPEIIFETERLLDSQENLEIQVD 59

Query: 61  YEKAVLFLKEQNFSKAYEYFNQ--CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           + KAVL LK+  + +A + F +     + P       SLL      Y  G  + A S   
Sbjct: 60  FNKAVLHLKKGEYEEAIKIFEKTALVIEVP-------SLLNMGIAYYKLGDTETAKSYLN 112

Query: 119 E 119
           +
Sbjct: 113 K 113


>gi|303240302|ref|ZP_07326821.1| TPR repeat-containing protein [Acetivibrio cellulolyticus CD2]
 gi|302592212|gb|EFL61941.1| TPR repeat-containing protein [Acetivibrio cellulolyticus CD2]
          Length = 581

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 39/117 (33%), Gaps = 20/117 (17%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
             R+ +++    L    + +A + ++   +   D P            A    + GKY +
Sbjct: 29  SSRDYFQEGNFLLNSGKYDEAIKNYDRAIKIDDDVPEFYY------NKAVCLSNLGKYNE 82

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           A  L +  I       +    Y+  G    +  +            L  +S+ +ERY
Sbjct: 83  AIELYDRVIDL---DSDFKEAYFNKGACLVEAHKLAD--------ALDTVSKYIERY 128


>gi|253571826|ref|ZP_04849231.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251838423|gb|EES66509.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 734

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 39/107 (36%), Gaps = 17/107 (15%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSR----DFPFAGVARKSLLMSAFVQYSAGKYQ 111
            +  ++  A  +LK++ +++A E + +           A   +K      +      KY 
Sbjct: 497 SEDILFPIADFYLKKERWNEAIEVYEEMETIGALQGRGAEYYQK----LGYALQKNKKYA 552

Query: 112 QAASLGEEYITQYP----ESKNVDYVY-----YLVGMSYAQMIRDVP 149
           +A     +  T  P     ++++   Y     Y   +SY + + +  
Sbjct: 553 EAIDAYLKADTLKPDNIWNNRHLAICYRLNRNYQAALSYYKKVEEAT 599


>gi|239946448|ref|ZP_04698204.1| tetratricopeptide TPR_2 [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239920724|gb|EER20751.1| tetratricopeptide TPR_2 [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 375

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 41/112 (36%), Gaps = 14/112 (12%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            Y K   F K   + +A + +N+  +  P       S        Y+ G+Y+++    E+
Sbjct: 254 YYNKGNSFYKLGKYEEAIKEYNKAIKLKP--DYVE-SYYNKGISLYNIGEYEESIIAYEK 310

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            I   P+  ++   Y   G S   +           +  ++  ++ +E   +
Sbjct: 311 AIELKPDDADI---YNNKGTSLFNL--------GEYEEAIKAYNKSIELKPD 351



 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/132 (13%), Positives = 40/132 (30%), Gaps = 28/132 (21%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
             +     +  ++ Y+          + +A + +N+  +  P              + Y 
Sbjct: 3   EKNEFEKHQAAKKYYDAGQALALRGRYEEAIKEYNKAIKLKP----------DEDVLYYK 52

Query: 107 AGK-------YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
            G        Y++A    ++ I+  P  +  D  Y   G S+         D    +  L
Sbjct: 53  KGNSLAFLGRYEEAIECYDKSISLNP--EYAD-AYNNKGNSFF--------DLEKYEEAL 101

Query: 160 QYMSRIVERYTN 171
               + +E   N
Sbjct: 102 VEYDKAIELKPN 113


>gi|218245456|ref|YP_002370827.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801]
 gi|218165934|gb|ACK64671.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801]
          Length = 263

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 63/204 (30%), Gaps = 40/204 (19%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSA 107
             D +    + +  + + +++N+ KA E   +                 L++  +  + A
Sbjct: 58  AEDRKNAANLRQLGLQYRQQENYPKAIESLEKSVSLDSKNLSG------LVLLGWTLHLA 111

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           GK   A    E  +T   +          +G+ Y          Q   +  +   S+ V 
Sbjct: 112 GKSPSAQQTLEHALTINSQHIET---LNALGIVY--------LVQGNLEQAIATHSKAVI 160

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
              N               N++A   + +   Y +  +Y  AI   Q  +       H  
Sbjct: 161 INPN---------------NEIAHYNLNLA--YQRLQQYTKAIKHGQQAIKLEPHNPHPW 203

Query: 228 EAMARLVEAYVALALMDEAREVVS 251
            A+A     Y  +    +++E   
Sbjct: 204 VALAI---TYWEMGDSKKSQETYR 224


>gi|154340822|ref|XP_001566364.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
          Length = 692

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 3/53 (5%)

Query: 67  FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++++  + +A E       +FP +  A    LM A+  Y  G Y +AASL E+
Sbjct: 60  YIRDHQYEEAVELLATQLEEFPRSRAA--VSLM-AYCYYMMGDYGEAASLYEQ 109


>gi|84687703|ref|ZP_01015576.1| hypothetical protein 1099457000251_RB2654_05632 [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84664286|gb|EAQ10777.1| hypothetical protein RB2654_05632 [Rhodobacterales bacterium
           HTCC2654]
          Length = 275

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 19/46 (41%)

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           G++  A   FQ  + NY       +A+    EA  A  ++ +A   
Sbjct: 166 GDFAGAASMFQTFVDNYPGTPMTGQALFLKGEALNAQNMVADAARA 211



 Score = 35.1 bits (80), Expect = 9.5,   Method: Composition-based stats.
 Identities = 12/105 (11%), Positives = 31/105 (29%), Gaps = 10/105 (9%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV-QYSAGKYQQAASLGEEYITQYPES 127
           +  +F+ A   F     ++P   +  ++L +              A +    +    P  
Sbjct: 164 EAGDFAGAASMFQTFVDNYPGTPMTGQALFLKGEALNAQNMVADAARAYLASFSAD-PTG 222

Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           ++       +G +  Q+          T      +  +  R+  S
Sbjct: 223 QSAPNALVQLGTALGQL--------GQTNEACATLGEVPNRFPGS 259


>gi|254774296|ref|ZP_05215812.1| putative transcriptional regulator [Mycobacterium avium subsp.
           avium ATCC 25291]
          Length = 381

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 8/60 (13%), Positives = 18/60 (30%), Gaps = 7/60 (11%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK--SLLMSAFVQYSAGKYQQAASLGEE 119
            +A   +               +R+ P      +  + LM+A+  Y   +   A +    
Sbjct: 171 AQAEAEIACGRAFSVITELESLTREHP---YREQLWAQLMTAY--YLTDRQSDALAAYRR 225


>gi|221103525|ref|XP_002164032.1| PREDICTED: similar to nephrocystin 3, partial [Hydra magnipapillata]
          Length = 1469

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 50/137 (36%), Gaps = 19/137 (13%)

Query: 57   QREVYEKAVLFLKEQNFSKAYEYFNQ-------CSRDFPFAGVAR-KSLLMSAFVQ---Y 105
               +Y   + +  ++N+ +A  YF Q         ++ P    A     L   +V    Y
Sbjct: 1297 AHSLYNLGIAYFSKENYDQAIHYFEQSLQMEKLIYKNQPNPRTAEILHNLGLIYVNKKQY 1356

Query: 106  SA--GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
                  Y+Q+    ++ I Q+    ++  +   +G+ YA  I       +  +  LQ   
Sbjct: 1357 KDAINFYEQSLD-IKKLILQHQPHPSIAILLNNLGLVYAD-IEQYDQAIKYHQQALQ--- 1411

Query: 164  RIVERYTNSPYVKGARF 180
             +++ + N PY      
Sbjct: 1412 -VIQVFENHPYTANIEK 1427



 Score = 36.6 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 77/234 (32%), Gaps = 46/234 (19%)

Query: 52   TDVRYQREVYEKAVLFLKEQNFSKAYEYFN------QC---SRDFPFAGVARKSLLMSAF 102
                    +    +++  +  + +A   +       +     +  P    +  SL +   
Sbjct: 1206 PHPDVADSLNNLGLIYYDKGQYDQAINCYEQSLAMNKLIYQDKPHPSVAYSFNSLGLL-- 1263

Query: 103  VQYSAGKYQQAASLGEEYITQYP------ESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
               S GKY QA +  EE +  Y       +  +V +  Y +G++Y        YDQ    
Sbjct: 1264 -YISIGKYDQAVNYCEESLKIYKLVYQNEQHPDVAHSLYNLGIAYFSKEN---YDQ---- 1315

Query: 157  LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL- 215
              + Y  + ++      Y            + L       G  Y+ + +Y  AI  ++  
Sbjct: 1316 -AIHYFEQSLQM-EKLIYKNQPNPRTAEILHNL-------GLIYVNKKQYKDAINFYEQS 1366

Query: 216  -----VLANYSDAEHAEEAMARLVEAYVALALMDEA----REVVSLIQ--ERYP 258
                 ++  +         +  L   Y  +   D+A    ++ + +IQ  E +P
Sbjct: 1367 LDIKKLILQHQPHPSIAILLNNLGLVYADIEQYDQAIKYHQQALQVIQVFENHP 1420


>gi|220702197|pdb|2KC7|A Chain A, Solution Nmr Structure Of Bacteroides Fragilis Protein
           Bf1650. Northeast Structural Genomics Consortium Target
           Bfr218
          Length = 99

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 33/92 (35%), Gaps = 11/92 (11%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
            L +     + G  + A    EE++   P  K  D  YYL+G +Y ++           +
Sbjct: 3   QLKTIKELINQGDIENALQALEEFLQTEPVGK--DEAYYLMGNAYRKL--------GDWQ 52

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
             L      +E   +SP    AR  V    N 
Sbjct: 53  KALNNYQSAIELNPDSP-ALQARKMVMDILNF 83


>gi|254473178|ref|ZP_05086576.1| tetratricopeptide TPR_2 [Pseudovibrio sp. JE062]
 gi|211957899|gb|EEA93101.1| tetratricopeptide TPR_2 [Pseudovibrio sp. JE062]
          Length = 236

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/121 (11%), Positives = 36/121 (29%), Gaps = 18/121 (14%)

Query: 66  LFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
             ++ + +  A +  +   R  P    G  R++ +      +      ++ +  E+ +  
Sbjct: 125 RAIEGKEYGLALDLLDAVVRLDPGYVEGWNRRATV-----HFLKEDLGRSLADIEQVLRI 179

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
            P      Y      +S   MI          +  L+    ++  Y      + A   + 
Sbjct: 180 EPRH----YP----ALSGFAMIL---RKTGENEKALEVFQHVLSIYPLLENAQDAVKSLR 228

Query: 184 V 184
            
Sbjct: 229 E 229


>gi|194373965|dbj|BAG62295.1| unnamed protein product [Homo sapiens]
          Length = 604

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 11/81 (13%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDF--PFAGVA-------RKSLLMSAFVQYSAGKYQ 111
           ++   +     ++  A  +  +    F   +             +L   AF  + AG   
Sbjct: 185 FQVGKVAYDMGDYYHAIPWLEEAVSLFRGSYGEWKTEDEASLEDALDHLAFAYFRAGNVS 244

Query: 112 QAASLGEEYITQY-PESKNVD 131
            A SL  E++  Y P++K + 
Sbjct: 245 CALSLSREFL-LYSPDNKRMA 264


>gi|118465098|ref|YP_880660.1| transcriptional regulator [Mycobacterium avium 104]
 gi|118166385|gb|ABK67282.1| putative transcriptional regulator [Mycobacterium avium 104]
          Length = 381

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 8/60 (13%), Positives = 18/60 (30%), Gaps = 7/60 (11%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK--SLLMSAFVQYSAGKYQQAASLGEE 119
            +A   +               +R+ P      +  + LM+A+  Y   +   A +    
Sbjct: 171 AQAEAEIACGRAFSVITELESLTREHP---YREQLWAQLMTAY--YLTDRQSDALAAYRR 225


>gi|91201894|emb|CAJ74954.1| conserved hypothetical protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 505

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 29/77 (37%), Gaps = 8/77 (10%)

Query: 46  VYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAF 102
            Y D++ +    ++++   A+ +    N+ +A   +               ++L      
Sbjct: 377 TYRDAMNEYPSNKQIHTALALAYKNNGNYKEAINEYKALIA-----EDLENAVLRNNIGT 431

Query: 103 VQYSAGKYQQAASLGEE 119
           V Y  G+Y +A    ++
Sbjct: 432 VYYRKGEYDEAIKEYKK 448


>gi|75909506|ref|YP_323802.1| hypothetical protein Ava_3299 [Anabaena variabilis ATCC 29413]
 gi|75703231|gb|ABA22907.1| conserved hypothetical protein [Anabaena variabilis ATCC 29413]
          Length = 724

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 8/57 (14%), Positives = 22/57 (38%), Gaps = 1/57 (1%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E  +  LK+ N+  A       +        + ++ +        +G+ ++A +L +
Sbjct: 10  EAGLAALKQGNYQTAIAQLEPIATQGNGTA-SLQARVGLVMAYARSGELKKAIALCQ 65


>gi|17231870|ref|NP_488418.1| hypothetical protein all4378 [Nostoc sp. PCC 7120]
 gi|17133514|dbj|BAB76077.1| all4378 [Nostoc sp. PCC 7120]
          Length = 727

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 8/57 (14%), Positives = 22/57 (38%), Gaps = 1/57 (1%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E  +  LK+ N+  A       +        + ++ +        +G+ ++A +L +
Sbjct: 10  EAGLAALKQGNYQTAIAQLEPIATQGNGTA-SLQARVGLVMAYARSGELKKAIALCQ 65


>gi|302818335|ref|XP_002990841.1| hypothetical protein SELMODRAFT_161156 [Selaginella moellendorffii]
 gi|300141402|gb|EFJ08114.1| hypothetical protein SELMODRAFT_161156 [Selaginella moellendorffii]
          Length = 973

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 67/195 (34%), Gaps = 32/195 (16%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           K  L L + ++ + ++ F       P       +LL  A  Q++ G++Q++  L +  + 
Sbjct: 132 KGQLLLAKGDYEQMFDVFKIVLDVRPDN---LLALLGQACAQFNRGRFQESLGLYKRVLQ 188

Query: 123 QYPESK------NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            +P         N+D     +G+       D    Q  TK ML+      E Y    Y  
Sbjct: 189 MHPGCPASLDPENLD-ALVALGIMDINA-NDAESVQEGTKKMLEAF----EIYP---YCA 239

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
            A        N LA         Y    ++       +  LA+  +A    ++   L  +
Sbjct: 240 TAL-------NHLANH-------YFYTEQHGVVEQLMETALASTDNALIKSQSYFNLARS 285

Query: 237 YVALALMDEAREVVS 251
           Y +    D+A     
Sbjct: 286 YHSKGDYDKAAAYYR 300


>gi|225551900|ref|ZP_03772840.1| FF domain protein [Borrelia sp. SV1]
 gi|225370898|gb|EEH00328.1| FF domain protein [Borrelia sp. SV1]
          Length = 903

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 3/62 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y KA + LK++N+  A   ++   +  P       + +  A     +G   QA S  E+
Sbjct: 732 LYLKASINLKKENYQNAIPLYSLVIKKNPEN---TSAYINLAKAYEKSGNKSQAISTLEK 788

Query: 120 YI 121
            I
Sbjct: 789 II 790



 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 42/279 (15%), Positives = 79/279 (28%), Gaps = 74/279 (26%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSR 85
           ++A  +    +   + +VY         Q + Y+  ++  K + +  + E F+   +   
Sbjct: 531 TLAQAYENNGDLLKAENVYEKITKLTNTQEDHYKLGIIRFKLKKYEHSIESFDQTIKLDP 590

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
                   +K+L           K ++A    E+ I      KN    YY  G++  +  
Sbjct: 591 KH------KKALHNKGIALMMLNKNKKAIESFEKAIQI---DKNYGTAYYQKGIAEEKN- 640

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------------RFYVTVGR------ 186
                     +            Y N  Y   A               Y+          
Sbjct: 641 -------GDMQQAFASFKNAYNLYKNPNYALKAGIVSNNLGNFKQSEEYLNFFNANAKKP 693

Query: 187 NQLAAKEVEIGRY------------------------Y--------LKRGEYVAAIPRFQ 214
           N++A   + I ++                        Y        LK+  Y  AIP + 
Sbjct: 694 NEIAIYNLSIAKFENNKLEESLETINKAIDLNPEKSEYLYLKASINLKKENYQNAIPLYS 753

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           LV+    +   A      L +AY       +A   +  I
Sbjct: 754 LVIKKNPENTSAY---INLAKAYEKSGNKSQAISTLEKI 789



 Score = 35.9 bits (82), Expect = 6.3,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 78/256 (30%), Gaps = 65/256 (25%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS------------ 100
           D  Y    Y+K +   K  +  +A+  F      +     A K+ ++S            
Sbjct: 623 DKNYGTAYYQKGIAEEKNGDMQQAFASFKNAYNLYKNPNYALKAGIVSNNLGNFKQSEEY 682

Query: 101 ---------------AF----VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
                           +     ++   K +++     + I   P  +  +Y  YL     
Sbjct: 683 LNFFNANAKKPNEIAIYNLSIAKFENNKLEESLETINKAIDLNP--EKSEY-LYLKASIN 739

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYVKGARFYVTVGRNQLAAKEVE---- 195
            +            +  +   S ++++     S Y+  A+ Y   G    A   +E    
Sbjct: 740 LKK--------ENYQNAIPLYSLVIKKNPENTSAYINLAKAYEKSGNKSQAISTLEKIIN 791

Query: 196 ---------IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
                    +G  Y K   Y  AI  F+  + N        EA   L    + +     A
Sbjct: 792 KNNKLALNNLGILYKKEKNYQKAIEIFEKAIIN-----SDIEAKYNLATTLIEINDNTRA 846

Query: 247 REVV---SLIQERYPQ 259
           ++++   + ++   P+
Sbjct: 847 KDLLIEYTKLKPNNPE 862



 Score = 35.1 bits (80), Expect = 9.9,   Method: Composition-based stats.
 Identities = 11/124 (8%), Positives = 44/124 (35%), Gaps = 18/124 (14%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
            +   ++  D +  + +   A  +    +  KA   + + ++        ++       +
Sbjct: 516 NEFLKNNPNDAQASKTL---AQAYENNGDLLKAENVYEKITKL----TNTQEDHYKLGII 568

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           ++   KY+ +    ++ I   P+ K      +  G++   + ++        K  ++   
Sbjct: 569 RFKLKKYEHSIESFDQTIKLDPKHKK---ALHNKGIALMMLNKN--------KKAIESFE 617

Query: 164 RIVE 167
           + ++
Sbjct: 618 KAIQ 621


>gi|149411439|ref|XP_001512529.1| PREDICTED: similar to leprecan-like 1 protein [Ornithorhynchus
           anatinus]
          Length = 532

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 25/72 (34%), Gaps = 5/72 (6%)

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           F  Y   +Y +A    + Y+  +P+ ++V        +SY + + +   D    +     
Sbjct: 138 FAYYQVDEYVKALECAKSYLLFHPDDEDV-----QDNVSYYESLLEEGLDPETIEPREDA 192

Query: 162 MSRIVERYTNSP 173
              +      S 
Sbjct: 193 AKFLKRHKLESE 204


>gi|54874|emb|CAA34914.1| unknown protein [Mus musculus]
          Length = 519

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/146 (12%), Positives = 43/146 (29%), Gaps = 30/146 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARK-------SLLMSAFVQYSAGK 109
           E+   + KE  + +A   + +      +         +K       S L  A        
Sbjct: 228 ERGTAYFKEGKYKQALLQYKKIVSWLEYESSFSGEEMQKVHALRLASHLNLAMCHLKLQA 287

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           +  A     + +     ++      +  G ++   + D                ++++ Y
Sbjct: 288 FSAAIESCNKALELDSNNEKG---LFRRGEAHL-AVNDFDL-------ARADFQKVLQLY 336

Query: 170 TNSPYVKGARFYVTVG----RNQLAA 191
            ++     A+  + V     R QLA 
Sbjct: 337 PSNK---AAKTQLAVCQQRTRRQLAR 359



 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 35/84 (41%), Gaps = 2/84 (2%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFS 74
             +++   L    ++A+C L      ++ +    ++  D   ++ ++ +    L   +F 
Sbjct: 264 MQKVHALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFD 323

Query: 75  KAYEYFNQCSRDFPFAGVARKSLL 98
            A   F +  + +P +  A K+ L
Sbjct: 324 LARADFQKVLQLYP-SNKAAKTQL 346


>gi|62655561|ref|XP_576630.1| PREDICTED: peptidylprolyl isomerase D [Rattus norvegicus]
 gi|109487667|ref|XP_001057061.1| PREDICTED: similar to peptidylprolyl isomerase D [Rattus
           norvegicus]
 gi|149036303|gb|EDL90962.1| rCG63199 [Rattus norvegicus]
          Length = 370

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 2/89 (2%)

Query: 11  IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLK 69
           I +A   +L   AL+   +I  C L     Q + D  L+++  D    + +Y KA  +  
Sbjct: 260 IEKADVSRLQPIALSCVLNIGACKLKMSNWQGAIDSCLEALEMDPSNTKALYRKAQGWQG 319

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
            + + +A     +     P    A ++ L
Sbjct: 320 LKEYDQALADLKKAQEIAP-GDKAIQAEL 347


>gi|67459383|ref|YP_247007.1| hypothetical protein RF_0991 [Rickettsia felis URRWXCal2]
 gi|67004916|gb|AAY61842.1| unknown [Rickettsia felis URRWXCal2]
          Length = 245

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 18/46 (39%)

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
             A   Y   K  +A    + +I +YP S  +   Y+  G  + + 
Sbjct: 122 DLALAAYKDNKLTEAKDKFKNFIQKYPNSSLISNAYFWYGECFFKQ 167



 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 15/108 (13%), Positives = 37/108 (34%), Gaps = 20/108 (18%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                    +++Y NS  +  A F+                  + K+ +Y  A   +   
Sbjct: 135 EAKDKFKNFIQKYPNSSLISNAYFWYGEC--------------FFKQKDYNGAAVNY--- 177

Query: 217 LANYSDAE---HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           L  Y ++     + + + +L  +   L    EA  +++ + + +P   
Sbjct: 178 LKGYKESPKGAKSSDGLLKLALSLGELKKTTEACNMLAKLDKEFPTNR 225



 Score = 35.9 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 10/65 (15%), Positives = 25/65 (38%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D+   ++ Y+ A+   K+   ++A + F    + +P + +   +        +    Y  
Sbjct: 113 DIAPDKQAYDLALAAYKDNKLTEAKDKFKNFIQKYPNSSLISNAYFWYGECFFKQKDYNG 172

Query: 113 AASLG 117
           AA   
Sbjct: 173 AAVNY 177


>gi|51948528|ref|NP_001004279.1| peptidyl-prolyl cis-trans isomerase D [Rattus norvegicus]
 gi|66773787|sp|Q6DGG0|PPID_RAT RecName: Full=Peptidyl-prolyl cis-trans isomerase D; Short=PPIase
           D; AltName: Full=40 kDa peptidyl-prolyl cis-trans
           isomerase; AltName: Full=Cyclophilin-40; Short=CYP-40;
           AltName: Full=Rotamase D
 gi|49900877|gb|AAH76386.1| Peptidylprolyl isomerase D (cyclophilin D) [Rattus norvegicus]
          Length = 370

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 2/89 (2%)

Query: 11  IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLK 69
           I +A   +L   AL+   +I  C L     Q + D  L+++  D    + +Y KA  +  
Sbjct: 260 IEKADVSRLQPIALSCVLNIGACKLKMSNWQGAIDSCLEALEMDPSNTKALYRKAQGWQG 319

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
            + + +A     +     P    A ++ L
Sbjct: 320 LKEYDQALADLKKAQEIAP-GDKAIQAEL 347


>gi|261328922|emb|CBH11900.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
           DAL972]
          Length = 416

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/146 (13%), Positives = 45/146 (30%), Gaps = 23/146 (15%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCS---RDFPFAGVARK 95
           +   +    ++  +     E+  K    +   N+ +A  Y+         +  F   A +
Sbjct: 121 KAREKFEKRNNPYEGMTAEEIKNKGNELMGLANYKQAVAYYTKAIEMEPENHVF--FANR 178

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +             Y+ A    E  I+  P      Y       +Y+++   + Y Q   
Sbjct: 179 AA-----AHTHLKDYRSAIIDCERSISICPT-----YA-----KAYSRLGTTLFY-QENY 222

Query: 156 KLMLQYMSRIVERYTNSP-YVKGARF 180
           +  +   S+  E    +  Y +  + 
Sbjct: 223 QRAVDAFSKACELDPTNERYREDLKQ 248


>gi|262193399|ref|YP_003264608.1| serine/threonine protein kinase with TPR repeats [Haliangium
           ochraceum DSM 14365]
 gi|262076746|gb|ACY12715.1| serine/threonine protein kinase with TPR repeats [Haliangium
           ochraceum DSM 14365]
          Length = 967

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 25/68 (36%), Gaps = 3/68 (4%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           +A +   +  + KA   F + +R  P +    +  ++      +AG   +AAS     + 
Sbjct: 891 QAQIAYNQGLYGKAIPLFEKAARMRPRSA---EVQILLGQAYLAAGNKSKAASSFRRALQ 947

Query: 123 QYPESKNV 130
             P     
Sbjct: 948 LRPGDARA 955


>gi|222099498|ref|YP_002534066.1| hypothetical protein CTN_0524 [Thermotoga neapolitana DSM 4359]
 gi|221571888|gb|ACM22700.1| Putative uncharacterized protein [Thermotoga neapolitana DSM 4359]
          Length = 274

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 23/70 (32%), Gaps = 13/70 (18%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQ-------CSRDFPFAGVARKSLLMSAFVQYSAGKY 110
            ++Y  A+    E ++ +A   F +            P         L      Y+ G Y
Sbjct: 21  NDLYTNALNAYLEGDYRRALRLFEESLQKDPTIEERDP------LVKLKMGICAYAIGDY 74

Query: 111 QQAASLGEEY 120
           ++A +    +
Sbjct: 75  EKARAYLSNF 84


>gi|213402715|ref|XP_002172130.1| TPR repeat-containing protein [Schizosaccharomyces japonicus
           yFS275]
 gi|212000177|gb|EEB05837.1| TPR repeat-containing protein [Schizosaccharomyces japonicus
           yFS275]
          Length = 1103

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 46/149 (30%), Gaps = 22/149 (14%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108
            D    +  Y     F+ +Q ++KAYE + Q        P              + Y   
Sbjct: 567 ADSNDAQSWYLIGRCFVAQQKYNKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIN 620

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +YQ A       I   P    +  V+Y +G  Y      +          L    R  E 
Sbjct: 621 QYQDALDAYSRAIRLNP---YISEVWYDLGTLYESCHNQIG-------DALDAYQRAAEL 670

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
              +P++   +  +   +   + ++  + 
Sbjct: 671 DPGNPHI---KARLQYLQGAQSEQQRAVA 696


>gi|157126387|ref|XP_001654613.1| fk506-binding protein [Aedes aegypti]
 gi|108873299|gb|EAT37524.1| fk506-binding protein [Aedes aegypti]
          Length = 450

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 37/91 (40%), Gaps = 6/91 (6%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           L ++ + A+C+    +   ++D   +++  D +  + +Y +    L   +F KA E FN 
Sbjct: 293 LAVYLNKALCYQKLNDHDEAKDACNEALNIDKKSVKALYRRGQSRLSLGDFEKALEDFNA 352

Query: 83  CSRDFPFAGVARKSLLMSA-FVQYSAGKYQQ 112
                P      K+ L  A   +     Y +
Sbjct: 353 VREIEPEN----KAALNQATICKQKIKDYNE 379


>gi|78189658|ref|YP_379996.1| TPR repeat-containing protein [Chlorobium chlorochromatii CaD3]
 gi|78171857|gb|ABB28953.1| TPR repeat [Chlorobium chlorochromatii CaD3]
          Length = 226

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 46/133 (34%), Gaps = 7/133 (5%)

Query: 12  FEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ 71
                 ++ K AL +    A         +  +               + +    + +E 
Sbjct: 31  KHQALRRIKKGALLLCIFAATTLTACSNNELEKLQQEAWKNPNDAALTL-QLGYKYAQEG 89

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
            + +A E F +     P    A ++L  +A   +   +Y QA S  ++++ + P      
Sbjct: 90  RYMEANESFQKVLALDPKRDEALQALGATA---FRQKQYSQAISYFQQHLERAPADSAR- 145

Query: 132 YVYYLVGMSYAQM 144
              Y +G +Y Q+
Sbjct: 146 --LYNLGNAYMQL 156


>gi|50513270|pdb|1P5Q|A Chain A, Crystal Structure Of Fkbp52 C-Terminal Domain
 gi|50513271|pdb|1P5Q|B Chain B, Crystal Structure Of Fkbp52 C-Terminal Domain
 gi|50513272|pdb|1P5Q|C Chain C, Crystal Structure Of Fkbp52 C-Terminal Domain
          Length = 336

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 45/146 (30%), Gaps = 30/146 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARKSL-------LMSAFVQYSAGK 109
           E+  ++ KE  + +A   + +      +        A+K+        L  A        
Sbjct: 152 ERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQA 211

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           +  A     + +     ++         G+S          D    +L      ++++ Y
Sbjct: 212 FSAAIESCNKALELDSNNE--------KGLSRRGEAHLAVND---FELARADFQKVLQLY 260

Query: 170 TNSPYVKGARFYVTVG----RNQLAA 191
            N+     A+  + V     R QLA 
Sbjct: 261 PNNK---AAKTQLAVCQQRIRRQLAR 283


>gi|193061654|ref|ZP_03042751.1| cellulose synthase operon protein C [Escherichia coli E22]
 gi|194428684|ref|ZP_03061221.1| cellulose synthase operon protein C [Escherichia coli B171]
 gi|218556081|ref|YP_002388994.1| cellulose synthase subunit BcsC [Escherichia coli IAI1]
 gi|300907574|ref|ZP_07125210.1| tetratricopeptide repeat protein [Escherichia coli MS 84-1]
 gi|301306689|ref|ZP_07212746.1| tetratricopeptide repeat protein [Escherichia coli MS 124-1]
 gi|192932444|gb|EDV85041.1| cellulose synthase operon protein C [Escherichia coli E22]
 gi|194413267|gb|EDX29552.1| cellulose synthase operon protein C [Escherichia coli B171]
 gi|218362849|emb|CAR00479.1| cellulose synthase subunit [Escherichia coli IAI1]
 gi|300400691|gb|EFJ84229.1| tetratricopeptide repeat protein [Escherichia coli MS 84-1]
 gi|300838082|gb|EFK65842.1| tetratricopeptide repeat protein [Escherichia coli MS 124-1]
 gi|315254055|gb|EFU34023.1| tetratricopeptide repeat protein [Escherichia coli MS 85-1]
 gi|320198343|gb|EFW72946.1| Cellulose synthase operon protein C [Escherichia coli EC4100B]
 gi|323160574|gb|EFZ46515.1| cellulose synthase operon protein C [Escherichia coli E128010]
          Length = 1157

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 77/236 (32%), Gaps = 36/236 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197
             Q         +  +V R   S  V      +   G+   A             ++ + 
Sbjct: 557 RAQWN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 611 DWAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 663



 Score = 35.9 bits (82), Expect = 6.3,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + ++ P      Y   L
Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537


>gi|330447846|ref|ZP_08311494.1| tetratricopeptide repeat family protein [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328492037|dbj|GAA05991.1| tetratricopeptide repeat family protein [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 699

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 44/128 (34%), Gaps = 33/128 (25%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++A    ++  F +A + F            + +        +Y A  Y QA +  +   
Sbjct: 345 QQAYQSYQDGKFKQAAQDFE-----------SPQWK---GIAEYKAKNYTQAINTLK--- 387

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              P S       Y +G +YAQ            K  ++   ++++   N P    A+  
Sbjct: 388 ---PLSD--PMSRYNLGNAYAQS--------GQLKQAVETYEKLLKTDPNYP---DAQKN 431

Query: 182 VTVGRNQL 189
           + + +  L
Sbjct: 432 LDIVKKAL 439


>gi|315123119|ref|YP_004065125.1| putative lytic cell-wall binding lipoprotein [Pseudoalteromonas sp.
           SM9913]
 gi|315016879|gb|ADT70216.1| putative lytic cell-wall binding lipoprotein [Pseudoalteromonas sp.
           SM9913]
          Length = 294

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 33/241 (13%), Positives = 70/241 (29%), Gaps = 40/241 (16%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR---KSL 97
            S + V  + + +    R     A+ +L   N S+A     +       +  A    +  
Sbjct: 8   GSDKPVVENKINNAGAARTRIALALQYLNTGNNSQAKYNLERA------SEYAPNLPEVH 61

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA----QMIRDVPYDQR 153
              A+     G+   A    ++ +   P+  N         ++        I +      
Sbjct: 62  YSLAYYYQQVGENALADKAYQKALAIKPDDPNT--------LNNYGTFLCSIDEYDRATD 113

Query: 154 ATKLMLQ--YMSRIVERYTN-------SPYVKGARFYVTVGRNQLAAKEVE----IGRYY 200
                ++     R+ + Y N             A  Y     N  + +          YY
Sbjct: 114 QFLKAIEIPSYIRVAQSYENLALCAIEFNDFTNAESYFQQALNHSSQRASTLISLAALYY 173

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHA-EEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            K   Y A+      ++  Y D       A+         +  +++A ++ + I + YP 
Sbjct: 174 AKSDLYKAS-----TLIKRYDDTAQVSSRALLLSYLVKQRMGRIEDAEKIAATILQTYPN 228

Query: 260 G 260
            
Sbjct: 229 S 229


>gi|302343448|ref|YP_003807977.1| response regulator receiver protein [Desulfarculus baarsii DSM
           2075]
 gi|301640061|gb|ADK85383.1| response regulator receiver protein [Desulfarculus baarsii DSM
           2075]
          Length = 385

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 32/84 (38%), Gaps = 4/84 (4%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           D  L+   +       +E+    L      +A E F++  +  P +     ++  +    
Sbjct: 124 DSILEKRRNPDPVDVAFERGKALLAAGKPDQALESFDEALKLSPKSPRTLLAIGEALEAL 183

Query: 105 YSAGK----YQQAASLGEEYITQY 124
               +    Y++AA+L E ++  +
Sbjct: 184 QKDEEALSRYKEAANLAERFVKAH 207


>gi|296391031|ref|ZP_06880506.1| hypothetical protein PaerPAb_22884 [Pseudomonas aeruginosa PAb1]
 gi|313106851|ref|ZP_07793060.1| hypothetical protein PA39016_000780018 [Pseudomonas aeruginosa
           39016]
 gi|310879562|gb|EFQ38156.1| hypothetical protein PA39016_000780018 [Pseudomonas aeruginosa
           39016]
          Length = 268

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 20/55 (36%), Gaps = 4/55 (7%)

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
            Y +G+ Y         DQR       Y  R+V  +  +   + A+  +   R +
Sbjct: 94  LYQIGLIYMSRYN----DQRDDAKATDYFQRVVREFPGTHAAEHAQARLLAMRQR 144


>gi|170018241|ref|YP_001723195.1| cellulose synthase subunit BcsC [Escherichia coli ATCC 8739]
 gi|169753169|gb|ACA75868.1| cellulose synthase operon C domain protein [Escherichia coli ATCC
           8739]
 gi|323939490|gb|EGB35699.1| cellulose synthase operon protein C [Escherichia coli E482]
          Length = 1157

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 77/236 (32%), Gaps = 36/236 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197
             Q         +  +V R   S  V      +   G+   A             ++ + 
Sbjct: 557 RAQWN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 611 DWAQQRRDYTAARAAYQNVLTREP---ANADAILGLTEVDIAAGDKAAARSQLAKL 663



 Score = 35.9 bits (82), Expect = 6.3,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + ++ P      Y   L
Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537


>gi|91202283|emb|CAJ75343.1| hypothetical protein kuste4581 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 476

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 37/99 (37%), Gaps = 9/99 (9%)

Query: 35  LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF---PFAG 91
           L+  ER S+R    D   ++    + Y++       +++  A + + +    +   P   
Sbjct: 106 LIPIERLSARKDPADLERNMSLAAKYYQEGNTHCDNESYDLALKSYLKAEEVYPDLPGLH 165

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
                     ++    G    A    ++YI   P+SK++
Sbjct: 166 Y------NMGWLYSKLGDVDSAVDHLQKYIILAPDSKDI 198


>gi|72390447|ref|XP_845518.1| hypothetical protein [Trypanosoma brucei TREU927]
 gi|62360339|gb|AAX80755.1| hypothetical protein, conserved [Trypanosoma brucei]
 gi|70802053|gb|AAZ11959.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 416

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/146 (13%), Positives = 45/146 (30%), Gaps = 23/146 (15%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCS---RDFPFAGVARK 95
           +   +    ++  +     E+  K    +   N+ +A  Y+         +  F   A +
Sbjct: 121 KAREKFEKRNNPYEGMTAEEIKNKGNELMGLANYKQAVAYYTKAIEMEPENHVF--FANR 178

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +             Y+ A    E  I+  P      Y       +Y+++   + Y Q   
Sbjct: 179 AA-----AHTHLKDYRSAIIDCERSISICPT-----YA-----KAYSRLGTTLFY-QENY 222

Query: 156 KLMLQYMSRIVERYTNSP-YVKGARF 180
           +  +   S+  E    +  Y +  + 
Sbjct: 223 QRAVDAFSKACELDPTNERYREDLKQ 248


>gi|15599523|ref|NP_253017.1| hypothetical protein PA4327 [Pseudomonas aeruginosa PAO1]
 gi|218893417|ref|YP_002442286.1| hypothetical protein PLES_47051 [Pseudomonas aeruginosa LESB58]
 gi|254239007|ref|ZP_04932330.1| hypothetical protein PACG_05180 [Pseudomonas aeruginosa C3719]
 gi|254244863|ref|ZP_04938185.1| hypothetical protein PA2G_05735 [Pseudomonas aeruginosa 2192]
 gi|9950552|gb|AAG07715.1|AE004849_2 hypothetical protein PA4327 [Pseudomonas aeruginosa PAO1]
 gi|126170938|gb|EAZ56449.1| hypothetical protein PACG_05180 [Pseudomonas aeruginosa C3719]
 gi|126198241|gb|EAZ62304.1| hypothetical protein PA2G_05735 [Pseudomonas aeruginosa 2192]
 gi|218773645|emb|CAW29459.1| hypothetical protein PLES_47051 [Pseudomonas aeruginosa LESB58]
          Length = 268

 Score = 38.2 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 20/55 (36%), Gaps = 4/55 (7%)

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
            Y +G+ Y         DQR       Y  R+V  +  +   + A+  +   R +
Sbjct: 94  LYQIGLIYMSRYN----DQRDDAKATDYFQRVVREFPGTHAAEHAQARLLAMRQR 144


>gi|322505269|emb|CAM39872.2| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 692

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 3/53 (5%)

Query: 67  FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++++  + +A E       +FP +  A    LM A+  Y  G Y +AASL E+
Sbjct: 60  YIRDHQYEEAVELLATQLEEFPRSRAA--VSLM-AYCYYMMGDYGEAASLYEQ 109


>gi|331655157|ref|ZP_08356156.1| cellulose synthase operon protein C [Escherichia coli M718]
 gi|331047172|gb|EGI19250.1| cellulose synthase operon protein C [Escherichia coli M718]
          Length = 1157

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 78/236 (33%), Gaps = 36/236 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197
             Q +       +  +V R   S  V      +   G+   A             ++ + 
Sbjct: 557 RAQWS-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 611 DWAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 663


>gi|298246895|ref|ZP_06970700.1| transcriptional regulator, XRE family [Ktedonobacter racemifer DSM
           44963]
 gi|297549554|gb|EFH83420.1| transcriptional regulator, XRE family [Ktedonobacter racemifer DSM
           44963]
          Length = 869

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/104 (12%), Positives = 36/104 (34%), Gaps = 10/104 (9%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGV--ARKSLLMSAFVQY 105
                  R +   A+LF  +  + +A   + +          +      +S+   A + +
Sbjct: 596 PEHPDIARSLNNLAMLFYDQGKYEQAMPLYQRALHIREQALGSEHPDTARSISNLALIYH 655

Query: 106 SAGKYQQAASLGEEYITQYPE-----SKNVDYVYYLVGMSYAQM 144
             G+Y+QA +L +  +    +       ++      + + Y + 
Sbjct: 656 EQGEYEQAETLYQRALRIREQVLGMEHPDIARALNNLAVLYFEQ 699


>gi|284035520|ref|YP_003385450.1| hypothetical protein Slin_0587 [Spirosoma linguale DSM 74]
 gi|283814813|gb|ADB36651.1| Tetratricopeptide TPR_2 repeat protein [Spirosoma linguale DSM 74]
          Length = 1393

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 19/42 (45%), Gaps = 3/42 (7%)

Query: 105  YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
            Y  G+Y +A  + + ++   P +    Y   L G S  ++ R
Sbjct: 1282 YQRGQYTEAIVIYDRFLAGEPAN---AYALNLKGYSLFKLKR 1320


>gi|217076205|ref|YP_002333921.1| tetratricopeptide repeat domain protein [Thermosipho africanus
           TCF52B]
 gi|217036058|gb|ACJ74580.1| tetratricopeptide repeat domain protein [Thermosipho africanus
           TCF52B]
          Length = 354

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 68/194 (35%), Gaps = 36/194 (18%)

Query: 64  AVLFLKEQNFSKAYEY-FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
             ++  + ++ KA  Y   +      ++     +  M A        Y++AA++  + + 
Sbjct: 169 GEVYYNQGDYEKAISYWLKEIE----YSPNDIFTYFMIADAYTRMKNYEKAANILNKLLE 224

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
              ++ N+        ++  ++ + +  +   TK        I+      P        +
Sbjct: 225 I--DNNNI--------IAMYELSQ-IYREMGKTKEADMVEKEILNAKPIDPNGIEIWAKI 273

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
                             +K  +Y   +   + ++ N  D+ H +   A LV  Y+ L  
Sbjct: 274 K-----------------MKYNKYDEIVEVIEPMIDNTIDSLHLK---ALLVVPYIKLGK 313

Query: 243 MDEAREVVSLIQER 256
           ++EAR+    +++ 
Sbjct: 314 IEEARKYYEELKQN 327


>gi|158334750|ref|YP_001515922.1| TPR repeat-containing serine/threonine protein kinase
           [Acaryochloris marina MBIC11017]
 gi|158304991|gb|ABW26608.1| serine/threonine protein kinase with TPR repeats [Acaryochloris
           marina MBIC11017]
          Length = 654

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 27/104 (25%), Positives = 37/104 (35%), Gaps = 27/104 (25%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD---------YVY--YLVGMSYAQM 144
           +LL S + +Y AG YQ A +  +E I    + +N D         Y    Y   ++    
Sbjct: 360 ALLRSGYEKYRAGDYQGAIADYDESIDL--DDQNADAFNERGLAQYGLQNYQAALADYDQ 417

Query: 145 IRDVPYDQ--------RATKLMLQYMSRIVERYT-----NSPYV 175
              +  DQ          TK  LQ     VE Y      NS Y 
Sbjct: 418 ALKLD-DQHSNAFGNRGLTKHALQDYKGAVEDYNQAIRLNSQYA 460


>gi|149371025|ref|ZP_01890620.1| aerotolerance-related exported protein [unidentified eubacterium
           SCB49]
 gi|149355811|gb|EDM44369.1| aerotolerance-related exported protein [unidentified eubacterium
           SCB49]
          Length = 259

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 8/82 (9%), Positives = 26/82 (31%), Gaps = 7/82 (8%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAG 108
           V++ +    ++++         + +A + +    +          + L    A   Y   
Sbjct: 24  VSEAQKNNALFDQGTKHYAAGQYQQAIDSWKLIEKT-----DNESAALYYNLANAYYRLN 78

Query: 109 KYQQAASLGEEYITQYPESKNV 130
           K   +    E+ +   P   ++
Sbjct: 79  KVAPSIYYYEKALQLAPNDSDI 100


>gi|91093142|ref|XP_969809.1| PREDICTED: similar to Cdc27 CG8610-PA [Tribolium castaneum]
 gi|270003019|gb|EEZ99466.1| hypothetical protein TcasGA2_TC000032 [Tribolium castaneum]
          Length = 820

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 35/285 (12%), Positives = 93/285 (32%), Gaps = 41/285 (14%)

Query: 1   MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
           + + + +AI + +  A  L    L      A   L  +  +++ +       +      +
Sbjct: 438 VESCVQQAILMQKQSAEGL--MVLLRSLGQAYLHLSNFNCKAAIEELNVLPPNQFQTAWI 495

Query: 61  Y-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF--VQYSAGKYQQAASLG 117
           Y    + + +  ++  + +YF++     P+     +   M  +    +   K    ++L 
Sbjct: 496 YCLLGLAYFELTDYESSIKYFSKVHNLEPY-----RIQFMDVYSTALWHLQKEVALSALA 550

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV-- 175
           ++ I+    S      + + G  ++          +     +++  R V+     PY   
Sbjct: 551 QDLISLNKNSPVT---WCVSGNCFSL--------HKEHDTAIKFFQRAVQVDPRFPYAYT 599

Query: 176 ---------KGARFYVTVGRN--QLAAKEVE----IGRYYLKRGEYVAAIPRFQLVLANY 220
                    +     ++  RN  +L  +       IG  Y K+  Y  A   +   L   
Sbjct: 600 LLGHEYITTEELDKAMSCFRNAIRLDPRHYNAWFGIGTIYSKQERYHLAEINYSRALEIN 659

Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
             +      +  +     AL   ++A +  ++     P+    ++
Sbjct: 660 PQSSVI---LCHIGIVQHALKQTEKALKTFNVAIANNPKSPLCKF 701


>gi|17555058|ref|NP_499811.1| hypothetical protein T12D8.8 [Caenorhabditis elegans]
 gi|3879798|emb|CAB03349.1| C. elegans protein T12D8.8, confirmed by transcript evidence
           [Caenorhabditis elegans]
 gi|3880220|emb|CAB05818.1| C. elegans protein T12D8.8, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 422

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 33/91 (36%), Gaps = 10/91 (10%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKS 96
              S+++   D +     +R    KA       +F  A  +F       P +    A+++
Sbjct: 100 MGDSAKEATEDEIEKASEERG---KAQEAFSNGDFDTALTHFTAAIEANPGSAMLHAKRA 156

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
            ++         +   A +  ++ I+  P+S
Sbjct: 157 NVLL-----KLKRPVAAIADCDKAISINPDS 182


>gi|53712940|ref|YP_098932.1| hypothetical protein BF1650 [Bacteroides fragilis YCH46]
 gi|60681152|ref|YP_211296.1| hypothetical protein BF1658 [Bacteroides fragilis NCTC 9343]
 gi|253563082|ref|ZP_04840539.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|52215805|dbj|BAD48398.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
 gi|60492586|emb|CAH07358.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343]
 gi|251946858|gb|EES87140.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|301162641|emb|CBW22188.1| conserved hypothetical protein [Bacteroides fragilis 638R]
          Length = 91

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 33/92 (35%), Gaps = 11/92 (11%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
            L +     + G  + A    EE++   P  K  D  YYL+G +Y ++           +
Sbjct: 3   QLKTIKELINQGDIENALQALEEFLQTEPVGK--DEAYYLMGNAYRKL--------GDWQ 52

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
             L      +E   +SP    AR  V    N 
Sbjct: 53  KALNNYQSAIELNPDSP-ALQARKMVMDILNF 83


>gi|88861397|ref|ZP_01136027.1| hypothetical protein PTD2_04856 [Pseudoalteromonas tunicata D2]
 gi|88816663|gb|EAR26488.1| hypothetical protein PTD2_04856 [Pseudoalteromonas tunicata D2]
          Length = 540

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 82/217 (37%), Gaps = 35/217 (16%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
             L L  +N+++A  Y +  +   P   V + +L+  A + +   ++        ++   
Sbjct: 242 GKLELHLKNYNEAQIYLSSATDMSPRNIVRQNTLVNVARLNHDYEQHYDTNRAILKFAK- 300

Query: 124 YPES--KNVDYVYYL----VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           +      ++    YL     G+ YA          R T+  ++Y+S + +++ +      
Sbjct: 301 HSIHDCPDI----YLNVARAGVDYALTTEQSELITRLTRQTMEYLSELKQQFPD----AD 352

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLK--RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
            +  + + R +L         +YLK  R + VA I     ++ +       ++ + +  +
Sbjct: 353 TQEQLDIVRARL---------HYLKDERDKAVALIN---QLVEDDGPIRSVDDTLDK-AK 399

Query: 236 AYVALALMDEAREVVSLIQE---RYP--QGYWARYVE 267
           A   L     A E+   I E   +YP     +  Y+ 
Sbjct: 400 ALHELGFHQRASELFEKIAEHCAKYPVKDSTFIAYIS 436


>gi|191165276|ref|ZP_03027119.1| cellulose synthase operon protein C [Escherichia coli B7A]
 gi|300815254|ref|ZP_07095479.1| tetratricopeptide repeat protein [Escherichia coli MS 107-1]
 gi|309796168|ref|ZP_07690579.1| tetratricopeptide repeat protein [Escherichia coli MS 145-7]
 gi|331679608|ref|ZP_08380278.1| cellulose synthase operon protein C [Escherichia coli H591]
 gi|190904678|gb|EDV64384.1| cellulose synthase operon protein C [Escherichia coli B7A]
 gi|300532146|gb|EFK53208.1| tetratricopeptide repeat protein [Escherichia coli MS 107-1]
 gi|308120229|gb|EFO57491.1| tetratricopeptide repeat protein [Escherichia coli MS 145-7]
 gi|331072780|gb|EGI44105.1| cellulose synthase operon protein C [Escherichia coli H591]
          Length = 1157

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 77/236 (32%), Gaps = 36/236 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197
             Q         +  +V R   S  V      +   G+   A             ++ + 
Sbjct: 557 RAQWN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 611 DWAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 663



 Score = 35.9 bits (82), Expect = 6.3,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + ++ P      Y   L
Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537


>gi|324014177|gb|EGB83396.1| tetratricopeptide repeat protein [Escherichia coli MS 60-1]
          Length = 1157

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 77/235 (32%), Gaps = 34/235 (14%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   +    
Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAHINSLPHAQ 559

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK-----------EVEIGR 198
           ++          +  +V R  N   ++ A      G+   A             ++ +  
Sbjct: 560 WN--------SNIQELVNRLQNDQVLETANRLRENGKEAEAEAMLRQQPPSSRIDLTLAD 611

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 612 WAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 663


>gi|319953090|ref|YP_004164357.1| gliding motility protein spre [Cellulophaga algicola DSM 14237]
 gi|319421750|gb|ADV48859.1| protein involved in gliding motility SprE [Cellulophaga algicola
           DSM 14237]
          Length = 850

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 86/259 (33%), Gaps = 46/259 (17%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY------EKAVLFLKEQNFSK 75
           F L                +    V  +          +Y      E+    L   ++  
Sbjct: 5   FKLIAALVFGGVLFNACSTKKDAFVNRNWHALNTKYNVLYNGNIAFEEGREELNA-SYQD 63

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP-------ESK 128
              Y+       P   +  +  ++    +    K++ A     + I ++         + 
Sbjct: 64  --NYWEVL----PIERITIREEIIL-DSENKNPKFELAEEKATKAIQKHSMEIKDTERNP 116

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
             D  + L+G +     R +P         L+  + I+ +Y  S  +  A  +      +
Sbjct: 117 QTDEAFLLLGKTRYFEQRFLP--------ALEAFNYILRKYPKSDKLNEASIWREKVNIR 168

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           L   E+ +    LKR      + +F+ VL +    +   +A A + +AY+ L+ +D A +
Sbjct: 169 LENDELALKN--LKR------LFKFE-VLED----QEYADAKAMMAQAYINLSKIDTAIQ 215

Query: 249 VVSLI----QERYPQGYWA 263
            + +     ++   +G + 
Sbjct: 216 NLKVASAYTKKNPEKGRYY 234


>gi|313499294|gb|ADR60660.1| Cellulose synthase subunit BcsC [Pseudomonas putida BIRD-1]
          Length = 1172

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 53/165 (32%), Gaps = 17/165 (10%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
               +A     +  + +P +   R++L    F +    +   A ++ ++     P +++ 
Sbjct: 161 GQRPEAIRQLQRLDQQYPGSAGLRQTLAGWLFAEKRDRE---ALAVLDQLARD-PGARDA 216

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
                      AQ   D    Q  +          ++RY  SP +  A   +   R  LA
Sbjct: 217 A----------AQREFDYLSGQAVSATSAAAWQAFLQRYPASPLLAQASETLQQQRKLLA 266

Query: 191 AKEVEI---GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
               +    G+  L +G    A  + +  L  Y        A+  
Sbjct: 267 DPAWQAGQRGKALLDKGRNAEAETQLRRALRQYPGDAGLYGALGY 311


>gi|300922355|ref|ZP_07138477.1| tetratricopeptide repeat protein [Escherichia coli MS 182-1]
 gi|301326679|ref|ZP_07220003.1| tetratricopeptide repeat protein [Escherichia coli MS 78-1]
 gi|300421295|gb|EFK04606.1| tetratricopeptide repeat protein [Escherichia coli MS 182-1]
 gi|300846654|gb|EFK74414.1| tetratricopeptide repeat protein [Escherichia coli MS 78-1]
          Length = 1157

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 77/236 (32%), Gaps = 36/236 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197
             Q         +  +V R   S  V      +   G+   A             ++ + 
Sbjct: 557 RAQWN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 611 DWAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 663



 Score = 35.9 bits (82), Expect = 6.1,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + ++ P      Y   L
Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537


>gi|281337835|gb|EFB13419.1| hypothetical protein PANDA_011292 [Ailuropoda melanoleuca]
          Length = 602

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 72/225 (32%), Gaps = 33/225 (14%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D +    + EK   + K+  + +A E + +     P+  V        A   +   K+  
Sbjct: 129 DSQKALALKEKGNKYFKQGKYDEAIECYTKGMDADPYNPVLPT---NRASAYFRLKKFAV 185

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYA--QMIRDVPYD-------QRATKLMLQYMS 163
           A S     I     S    Y     G +    Q + D   D       +      +  + 
Sbjct: 186 AESDCNLAIALN-RSYTKAYA--RRGAARFALQKLEDAKKDYEKVLELEPNNFEAMNELK 242

Query: 164 RIVERYT--NSPYVKGARFYVTVG-----------RNQLAAKEVEIGRYYLKRGEYVAAI 210
           +I +      + Y K A   +                Q A  E ++G  + K G+Y  AI
Sbjct: 243 KINQALPSKENSYPKEADTMIKSTEGEKKQIEEQQNKQQAISEKDLGNGFFKEGKYERAI 302

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE--VVSLI 253
             +   +A          A   +  AY+ +   +EA +    +++
Sbjct: 303 ECYTRGIAA-DGTNALLPANRAM--AYLKIQKYEEAEKDCTQAIL 344


>gi|218697240|ref|YP_002404907.1| cellulose synthase subunit BcsC [Escherichia coli 55989]
 gi|218353972|emb|CAV00437.1| cellulose synthase subunit [Escherichia coli 55989]
          Length = 1157

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 77/236 (32%), Gaps = 36/236 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197
             Q         +  +V R   S  V      +   G+   A             ++ + 
Sbjct: 557 RAQWN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 611 DWAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 663


>gi|218294788|ref|ZP_03495642.1| Tetratricopeptide TPR_2 repeat protein [Thermus aquaticus Y51MC23]
 gi|218244696|gb|EED11220.1| Tetratricopeptide TPR_2 repeat protein [Thermus aquaticus Y51MC23]
          Length = 447

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 32/81 (39%), Gaps = 7/81 (8%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           EKA   LK  ++ KA   + +      +     ++ L      + AG+ ++A    ++  
Sbjct: 23  EKAEALLKAGDYEKAALAYEEVLAQD-YGLF--EAHLGLGVALFRAGRLEEARFAFDQMT 79

Query: 122 TQYP----ESKNVDYVYYLVG 138
             +P       N+  VY  +G
Sbjct: 80  RVFPDRYEGHFNLGQVYLRLG 100


>gi|124006916|ref|ZP_01691745.1| tetratricopeptide repeat family [Microscilla marina ATCC 23134]
 gi|123987369|gb|EAY27089.1| tetratricopeptide repeat family [Microscilla marina ATCC 23134]
          Length = 998

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 75/250 (30%), Gaps = 84/250 (33%)

Query: 73  FSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           + +A   + +          A+ +L+     ++    G++ +A     + +  Y   K +
Sbjct: 213 YVRAISLWEKM------GNHAQTALIYNDKGYLYQRMGEFAKALYAHNKALALY---KRI 263

Query: 131 DYV-------------------------YYLVGM-------------SYAQMIRDVPYDQ 152
           +Y+                         YY   +             S  Q I  +  DQ
Sbjct: 264 NYIKGCSRVYFGLGSLYWRQNKYTQAIKYYRQALQIDLQLNRQMHAASAYQNIGGLYSDQ 323

Query: 153 RATKLMLQYMSRIVERYTNS---------------------PY--VKGARFYVTVGRNQL 189
              K  L Y  + +E    S                      Y   +     +   +NQL
Sbjct: 324 AKYKEALHYYRKSLEIRLKSGNKYQIAKSYLYIGQVYKNKNEYNKARKYYLKIIAMKNQL 383

Query: 190 AAKEVEIGRYY-------LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
              ++ I + Y          G Y  A+  +Q  L+ Y    H EE    +   Y A+ +
Sbjct: 384 -NDDIHIAKTYYGLGVTYWYSGNYPKALDYYQKALSTYQKNNHKEE----IARCYDAIGI 438

Query: 243 MDEAREVVSL 252
           +   ++  +L
Sbjct: 439 VHAQQQNYAL 448


>gi|157963334|ref|YP_001503368.1| hypothetical protein Spea_3520 [Shewanella pealeana ATCC 700345]
 gi|157848334|gb|ABV88833.1| hypothetical protein Spea_3520 [Shewanella pealeana ATCC 700345]
          Length = 454

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 18/56 (32%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
                 L+ + +  A     +         +A +   M  +  Y  G+YQ A  L 
Sbjct: 108 NLGHSQLQLEQYKAAIATLTRLKLSMLDEPIAAQIRYMRGYAHYQLGQYQAAIDLL 163


>gi|332290809|ref|YP_004429418.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
 gi|332168895|gb|AEE18150.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
          Length = 674

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 8/53 (15%), Positives = 21/53 (39%), Gaps = 6/53 (11%)

Query: 62  EKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
           +K   F  + +++ A +Y+     ++      +++ L       Y    Y+ A
Sbjct: 22  QKGDRFFNKGDYASAAKYYEVALRKNN-----SKEILGKLIDAYYLDQDYRSA 69


>gi|328874451|gb|EGG22816.1| hypothetical protein DFA_04946 [Dictyostelium fasciculatum]
          Length = 408

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/143 (13%), Positives = 47/143 (32%), Gaps = 19/143 (13%)

Query: 49  DSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQY 105
           D + D   +   Y+     F ++Q +  A EY+       P +    + +++        
Sbjct: 67  DPMFDNVSESLKYKDIGNKFFQQQKYKDAVEYYTLAIDLDPSSSILFSNRAI-----AYI 121

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               + QA +     I    +S NV   Y+  G++  +        Q+  +  L     +
Sbjct: 122 KLKNFHQAEADCNRSINL--DSTNVK-AYHRRGLALKE--------QKRYRESLNDFIVV 170

Query: 166 VERYTNSPYVKGARFYVTVGRNQ 188
            ++   +   +     +     +
Sbjct: 171 SKKDPANKEAQTEIKGLYELIKR 193


>gi|310778588|ref|YP_003966921.1| TPR repeat-containing protein [Ilyobacter polytropus DSM 2926]
 gi|309747911|gb|ADO82573.1| TPR repeat-containing protein [Ilyobacter polytropus DSM 2926]
          Length = 363

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 35/130 (26%), Gaps = 28/130 (21%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAA 114
            + +  LK Q+++ A E +N+     P                Y  G        Y  A 
Sbjct: 250 NRGMAKLKLQDYNGAMEDYNKVIESDP----------DYEVAYYRRGLVKTKLRDYHGAL 299

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
               + I       N    YY  G+   ++              L+   + ++   N   
Sbjct: 300 EDYNKVIKL---DPNFKQAYYNRGIIKTKL--------GDFDGALEDFGKTIKLDPNDKD 348

Query: 175 VKGARFYVTV 184
            K       +
Sbjct: 349 AKEMHKKFQL 358



 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 28/209 (13%), Positives = 60/209 (28%), Gaps = 48/209 (22%)

Query: 35  LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94
           ++G  +   + + LD      Y      + +      +F  A E F++     P      
Sbjct: 57  IIGSRKDYDKTIQLDPEFKYAYD----NRGISKGDLGDFEGAVEDFDKAIELDP------ 106

Query: 95  KSLLMSAFVQ-------YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
                  +            G  + A +  ++ I   P+ K     Y+  G +       
Sbjct: 107 ----KFIYAYSNRGFTKTKLGDLEGAIADYDKAIKLNPKFKL---AYFNRGNAKYFSDD- 158

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY-------- 199
                   K  +   S+++     S     A     + + +L   +  I  Y        
Sbjct: 159 -------YKGAINDYSKVINIDPKSQ---VAYNNRGLAKWELGEYKSSIEDYNKAIRLDP 208

Query: 200 -----YLKRGEYVAAIPRFQLVLANYSDA 223
                Y  RG   A +  ++  + +Y+  
Sbjct: 209 KYKLSYNNRGFTKAQLKDYKGAINDYNKT 237


>gi|260576642|ref|ZP_05844629.1| tol-pal system protein YbgF [Rhodobacter sp. SW2]
 gi|259021127|gb|EEW24436.1| tol-pal system protein YbgF [Rhodobacter sp. SW2]
          Length = 272

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/130 (10%), Positives = 39/130 (30%), Gaps = 10/130 (7%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           ++  +++A   L   +F  A   F   +  +    +  ++  +        G+   AA  
Sbjct: 149 EQADFDRARAVLDSGDFRTAANQFATFATTYTGGPLTYEAHFLRGEALGKLGETADAARA 208

Query: 117 G-EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
             + +    P+          +G +   + +               ++ +  R+  S   
Sbjct: 209 YLDAFSGA-PDGPRAAASLLKLGQALGTLGQGP--------EACVTLAEVGTRFPGSTEA 259

Query: 176 KGARFYVTVG 185
             A+  +   
Sbjct: 260 SDAQSAMQGL 269


>gi|242279843|ref|YP_002991972.1| SpoIID/LytB domain protein [Desulfovibrio salexigens DSM 2638]
 gi|242122737|gb|ACS80433.1| SpoIID/LytB domain protein [Desulfovibrio salexigens DSM 2638]
          Length = 538

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 42/111 (37%), Gaps = 9/111 (8%)

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
           +Y   + +  T   Y   A+       N +  K + +  +         A   +++V  N
Sbjct: 57  KYFEALEQYDTAVDYSPVAKTR----VNAMFGKAMVLSTF---LDAPEKAADVYRMVGRN 109

Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
           Y D  +A+ A+ RL   Y  +   D A  V       +P+G +    E ++
Sbjct: 110 YPD--YADTALYRLGFLYYQMDRYDRANSVFRQYLRYFPKGKFKYQAEAVI 158



 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 2/52 (3%)

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
            KA + +    R++P    A  +L    F+ Y   +Y +A S+  +Y+  +P
Sbjct: 97  EKAADVYRMVGRNYP--DYADTALYRLGFLYYQMDRYDRANSVFRQYLRYFP 146


>gi|254410191|ref|ZP_05023971.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
 gi|196183227|gb|EDX78211.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
          Length = 273

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/162 (13%), Positives = 47/162 (29%), Gaps = 35/162 (21%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            +   +  +  + KA   + Q  +  P   +A              G+++ A +  ++ I
Sbjct: 116 NRGTAYEGKGEWQKAIADYRQVLQINPDDAMAYN---NLGNANAGKGEWEAAIANYQKAI 172

Query: 122 TQYPESKNV----DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
              P             Y +G                 K  +  + +++ +Y   P V+ 
Sbjct: 173 DLSPNFAFARANHALALYQIG---------------EKKEAILELRKLIRKYPQFPDVRA 217

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP---RFQLV 216
           A              E            +VAAI    R++ +
Sbjct: 218 ALTAALWVNGNQGEAE----------SNWVAAIGLDQRYKDI 249



 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 37/289 (12%), Positives = 89/289 (30%), Gaps = 63/289 (21%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSS--RDVYLDSVTDVRYQR--EVYEKAVLFLKEQNFS 74
           + ++ +++   + V    G     S      +  +T  + ++  E+ +KA    +   F+
Sbjct: 1   MKRWIVSLCGIVLVLVCSGLWITPSVMAQAQIPDLTQAQIEQLNELRQKAFTATQLGEFA 60

Query: 75  KAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
            A  Y+ Q     P      + +        + S  K  +A +   + I   P++ +  Y
Sbjct: 61  TAEAYWTQLIELLPDNPVGWSNR-----GNARVSQNKLDEAIADFNQSIQLAPDAPD-PY 114

Query: 133 -----VY-----YLVGMSYAQMIRDVPYDQRAT--------------KLMLQYMSRIVER 168
                 Y     +   ++  + +  +  D                  +  +    + ++ 
Sbjct: 115 LNRGTAYEGKGEWQKAIADYRQVLQINPDDAMAYNNLGNANAGKGEWEAAIANYQKAIDL 174

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
             N  + +             A   + +     + GE   AI   + ++  Y        
Sbjct: 175 SPNFAFAR-------------ANHALAL----YQIGEKKEAILELRKLIRKYPQFPDVRA 217

Query: 229 AMARLVEAYVALALMDEARE--VVSL-IQERYPQGYW----ARYVETLV 270
           A+     A        EA    V ++ + +RY    W     R+   +V
Sbjct: 218 AL---TAALWVNGNQGEAESNWVAAIGLDQRYKDIDWVENIRRWPPAMV 263


>gi|170051662|ref|XP_001861867.1| tetratricopeptide repeat domain 21B [Culex quinquefasciatus]
 gi|167872823|gb|EDS36206.1| tetratricopeptide repeat domain 21B [Culex quinquefasciatus]
          Length = 1325

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 34/122 (27%), Gaps = 40/122 (32%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPF-------------------AGVAR-------- 94
             A  ++++ NF+KA E       + P+                      A+        
Sbjct: 665 ATADFYMQQGNFNKAVELLKNIRPNQPYYVQAKTKMAQFYLVHKKDRLTYAQCFRELVAN 724

Query: 95  ----KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV------DYV---YYLVGMSY 141
                S LM      S  +   A    ++   Q P    +       YV    Y   ++Y
Sbjct: 725 CPGPSSYLMLGDAYMSIQEPDDAIEAYKQAHKQNPRDSLLASKLGRAYVKTHQYKKAIAY 784

Query: 142 AQ 143
            Q
Sbjct: 785 YQ 786


>gi|218961254|ref|YP_001741029.1| hypothetical protein; putative signal peptide [Candidatus
           Cloacamonas acidaminovorans]
 gi|167729911|emb|CAO80823.1| hypothetical protein; putative signal peptide [Candidatus
           Cloacamonas acidaminovorans]
          Length = 391

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 34/118 (28%), Gaps = 14/118 (11%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ-YPESKNV 130
           +++ A        R  P    A KS  + A       K   A +     +     +   +
Sbjct: 146 DYATAISNCENYLRLAPRGEFAEKSYYLIADCYLEQKKAYSAVATL---LKLQNAKLPEM 202

Query: 131 D--YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
           D  Y YY +G +Y    + +          +    +  E+   S         +   +
Sbjct: 203 DEQYFYYRLGYAYELSDKPID--------AIAAYRKGYEQDPYSQVAYQIEDRILELK 252



 Score = 36.6 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 27/103 (26%), Gaps = 32/103 (31%)

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFV--------------------------QYS- 106
             A          FP +  A+KSLL    +                           +  
Sbjct: 79  EDAISAHQWLIEKFPKSPYAQKSLLELGKIFILDRKIEEATLYLRRITSPEIIERFYWLG 138

Query: 107 -----AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
                   Y  A S  E Y+   P  +  +  YYL+   Y + 
Sbjct: 139 LCAWWNDDYATAISNCENYLRLAPRGEFAEKSYYLIADCYLEQ 181


>gi|66511128|ref|XP_394637.2| PREDICTED: n-alpha-acetyltransferase 15, NatA auxiliary
           subunit-like isoform 1 [Apis mellifera]
          Length = 856

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 42/127 (33%), Gaps = 29/127 (22%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAF 102
           D Y D + D    +E Y    L L+ + +++A + + +     P      AR +      
Sbjct: 212 DKYSDQICDKVTVKETY--GKLRLQLKQYAEAAQVYKELLNINPENTTYYARLAEAE--- 266

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
                 K ++  ++ + Y   +P             ++        P   +    +    
Sbjct: 267 ---RHTKPEETLAMLQRYEELFP-----------RALA--------PRRLQLNYAVEDEF 304

Query: 163 SRIVERY 169
             +V+RY
Sbjct: 305 KTLVDRY 311


>gi|83955686|ref|ZP_00964266.1| TPR domain protein [Sulfitobacter sp. NAS-14.1]
 gi|83839980|gb|EAP79156.1| TPR domain protein [Sulfitobacter sp. NAS-14.1]
          Length = 188

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 25/69 (36%), Gaps = 7/69 (10%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLG 117
           +Y +    + E + + A  +    +   P FA     ++        ++AG Y  A    
Sbjct: 71  LYSRGREAMSEGDTTLAIAHLTALTDHAPDFAEGYHARAQ-----AYFAAGLYGPAIDDL 125

Query: 118 EEYITQYPE 126
           E  +   P+
Sbjct: 126 ETTLALNPQ 134


>gi|330509110|ref|YP_004385538.1| TPR-repeat-containing protein [Methanosaeta concilii GP-6]
 gi|328929918|gb|AEB69720.1| TPR-repeat protein [Methanosaeta concilii GP-6]
          Length = 722

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 37/277 (13%), Positives = 85/277 (30%), Gaps = 67/277 (24%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSL 97
             S D+   S  D   +   + +     +  +  +A + F++    ++ + F     K  
Sbjct: 314 NGSADLQEGSFEDNSAEDW-FNRGQELQRNDSHEEALQAFDKAIEINQSYAF-AWGGK-- 369

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYP--------------------ESKNVDYVYYL- 136
               +V Y+ G+Y++A +  +  I   P                     ++     Y   
Sbjct: 370 ---GYVLYNMGRYEEAIAAWDRAIELEPDEFYSGSKWEMKGKVLAILGRNEESAQAYERA 426

Query: 137 -----VGMSYAQMIRDVPY------------DQRATKLMLQYMSRIVERYTNSPYVKGAR 179
                  ++  +   D+              DQ      L+ ++   +      +     
Sbjct: 427 LELADKAVTEYKTSTDLNLSAAWGFKGQLLDDQGRYVEALEAVANSSKANPEDAFAWAV- 485

Query: 180 FYVTVGRNQLAAKEVEIGRYY------------LKRGEY-VAAIPRFQLVLANYSDAEHA 226
               +  ++L      I  Y             L+   Y +A++ R++  L  Y+ A   
Sbjct: 486 -MGDILADRLGRYNESIESYNKSLEIDPKNIGALRGEGYALASLGRYEEALEYYNRALEI 544

Query: 227 EEAMAR----LVEAYVALALMDEAREVVSLIQERYPQ 259
           +   AR    L +A   + + +E+ +         PQ
Sbjct: 545 DSRFARAWQGLGDALRNMGMYNESIQAYDRAIAEMPQ 581


>gi|262197060|ref|YP_003268269.1| hypothetical protein Hoch_3877 [Haliangium ochraceum DSM 14365]
 gi|262080407|gb|ACY16376.1| Tetratricopeptide TPR_2 repeat protein [Haliangium ochraceum DSM
           14365]
          Length = 378

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 26/90 (28%), Gaps = 6/90 (6%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
            +     +     R    ++ KA      + F +A EYF +     P        L   A
Sbjct: 42  KASPQDEEDPERRRQISALFRKAQTAYDLREFDQAIEYFKELYTLSPHEAF----LYNIA 97

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVD 131
                AG  Q A    + Y+         D
Sbjct: 98  QSYRQAGDCQNALYFYKRYVAV--GGPEAD 125


>gi|220919579|ref|YP_002494883.1| hypothetical protein A2cp1_4500 [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219957433|gb|ACL67817.1| conserved hypothetical protein [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 291

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 37/128 (28%), Gaps = 25/128 (19%)

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ-RATKLMLQY 161
                G Y  A +     I+ +P            G      + D+  D+       +  
Sbjct: 78  SYLELGDYPSALAYYRRIISLHPGGPEAHEA---RG-----RLGDIFRDRYGDHLAAITQ 129

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
            + +     +SP                   ++E+   YL    +  A    +++   + 
Sbjct: 130 YADVAGS--DSPDAP--------------RYQLEVAHEYLALKRWEQARTEARILREKWP 173

Query: 222 DAEHAEEA 229
             E A+EA
Sbjct: 174 THELADEA 181


>gi|270308285|ref|YP_003330343.1| hypothetical protein DhcVS_891 [Dehalococcoides sp. VS]
 gi|270154177|gb|ACZ62015.1| hypothetical protein DhcVS_891 [Dehalococcoides sp. VS]
          Length = 123

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 22/72 (30%), Gaps = 9/72 (12%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR---KSLLMSAFVQYSAGKYQQAASLG 117
           Y +     ++ NF  A  ++ +          A     +     F  ++  +Y +A S  
Sbjct: 24  YNQGNDKARQGNFGIAINFYTKAIS------YAAGFNLAYTNRGFAYFALKEYSKAISDC 77

Query: 118 EEYITQYPESKN 129
              I   P    
Sbjct: 78  NYAIRLNPNDPE 89


>gi|159043750|ref|YP_001532544.1| tetratricopeptide repeat-containing protein [Dinoroseobacter shibae
           DFL 12]
 gi|157911510|gb|ABV92943.1| tetratricopeptide TPR_2 repeat protein [Dinoroseobacter shibae DFL
           12]
          Length = 183

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 29/81 (35%), Gaps = 7/81 (8%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGK 109
                 + + ++ +   +E +F+ A E F+      P +A    +++     F ++   +
Sbjct: 63  APDAAAQALLDEGMRKRREYDFAGAVEVFDALIAYCPDYAEGWNQRA-----FARFLQDR 117

Query: 110 YQQAASLGEEYITQYPESKNV 130
           Y  A    +  +   P     
Sbjct: 118 YDAALGDLDRALALSPTHTAA 138


>gi|157164051|ref|YP_001466112.1| TPR repeat-containing protein [Campylobacter concisus 13826]
 gi|112800522|gb|EAT97866.1| tetratricopeptide repeat domain protein [Campylobacter concisus
           13826]
          Length = 802

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 3/83 (3%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
            +D  Y   +Y  A  +LK+   S A    +  S +   +   + + L  A   Y  G+ 
Sbjct: 263 PSDENYPEVLYLIARAYLKDSIASDAKYMLDILSEEHAESKFTKLATLDYADYLYKIGRQ 322

Query: 111 QQAASLGEEYITQYPESKNVDYV 133
           ++A S  E+    Y  + ++D  
Sbjct: 323 KEALSDYEK--VLYSTN-DIDLA 342


>gi|157126389|ref|XP_001654614.1| fk506-binding protein [Aedes aegypti]
 gi|108873300|gb|EAT37525.1| fk506-binding protein [Aedes aegypti]
          Length = 398

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 37/91 (40%), Gaps = 6/91 (6%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           L ++ + A+C+    +   ++D   +++  D +  + +Y +    L   +F KA E FN 
Sbjct: 293 LAVYLNKALCYQKLNDHDEAKDACNEALNIDKKSVKALYRRGQSRLSLGDFEKALEDFNA 352

Query: 83  CSRDFPFAGVARKSLLMSA-FVQYSAGKYQQ 112
                P      K+ L  A   +     Y +
Sbjct: 353 VREIEPEN----KAALNQATICKQKIKDYNE 379


>gi|191170612|ref|ZP_03032165.1| cellulose synthase operon protein C [Escherichia coli F11]
 gi|300976750|ref|ZP_07173569.1| tetratricopeptide repeat protein [Escherichia coli MS 200-1]
 gi|190909420|gb|EDV69006.1| cellulose synthase operon protein C [Escherichia coli F11]
 gi|300308487|gb|EFJ63007.1| tetratricopeptide repeat protein [Escherichia coli MS 200-1]
          Length = 1157

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 77/235 (32%), Gaps = 34/235 (14%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   +    
Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAHINSLPHAQ 559

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK-----------EVEIGR 198
           ++          +  +V R  N   ++ A      G+   A             ++ +  
Sbjct: 560 WN--------SNIQELVNRLQNDQVLETANRLRENGKEAEAEAMLRQQPPSSRIDLTLAD 611

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 612 WAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 663


>gi|302386876|ref|YP_003822698.1| TPR repeat-containing protein [Clostridium saccharolyticum WM1]
 gi|302197504|gb|ADL05075.1| TPR repeat-containing protein [Clostridium saccharolyticum WM1]
          Length = 259

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 27/96 (28%), Gaps = 12/96 (12%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
                +A+   +G      +D                   +  L + N+  A E F+Q  
Sbjct: 9   AAILGLALTIAIGAGGCGKKDNKYSFR----------NAGIEALNQGNYDAAVEAFDQAI 58

Query: 85  RDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGE 118
                         L   A  QY AG Y  AA   +
Sbjct: 59  SSSKGLVGKFDVDVLKYRAEAQYLAGDYSSAADTYD 94


>gi|224824221|ref|ZP_03697329.1| Tetratricopeptide TPR_2 repeat protein [Lutiella nitroferrum 2002]
 gi|224603640|gb|EEG09815.1| Tetratricopeptide TPR_2 repeat protein [Lutiella nitroferrum 2002]
          Length = 378

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 26/75 (34%), Gaps = 8/75 (10%)

Query: 61  YEKAVLFL-----KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           Y +A   L      +  +  A   F +     P +      L    +  Y  G Y +AA+
Sbjct: 77  YAEAHNALGALYAAQGRYDMAIAEFQKALTTSPGSPH---FLNNLGYTLYLQGHYAEAAA 133

Query: 116 LGEEYITQYPESKNV 130
           + E+ +   P    +
Sbjct: 134 IYEKAVALSPSDLKI 148



 Score = 35.5 bits (81), Expect = 8.5,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 32/91 (35%), Gaps = 13/91 (14%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
                 Y+    +  +    KA   F +       +  A  A  +L    +   + G+Y 
Sbjct: 42  DSPAAYYQLGRYYQGQNRADKAIPAFQKALALDSQYAEAHNALGAL----YA--AQGRYD 95

Query: 112 QAASLGEEYITQYPESK----NVDYVYYLVG 138
            A +  ++ +T  P S     N+ Y  YL G
Sbjct: 96  MAIAEFQKALTTSPGSPHFLNNLGYTLYLQG 126


>gi|218702295|ref|YP_002409924.1| cellulose synthase subunit BcsC [Escherichia coli IAI39]
 gi|218372281|emb|CAR20144.1| cellulose synthase subunit [Escherichia coli IAI39]
          Length = 1157

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 77/236 (32%), Gaps = 36/236 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197
             Q         +  +V R   S  V      +   G+   A             ++ + 
Sbjct: 557 RAQWN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 611 DWAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 663



 Score = 35.9 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + ++ P      Y   L
Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537


>gi|149048292|gb|EDM00868.1| rCG62684, isoform CRA_a [Rattus norvegicus]
          Length = 251

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 2/89 (2%)

Query: 11  IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLK 69
           I +A   +L   AL+   +I  C L     Q + D  L+++  D    + +Y KA  +  
Sbjct: 141 IEKADVSRLQPIALSCVLNIGACKLKMSNWQGAIDSCLEALEMDPSNTKALYRKAQGWQG 200

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
            + + +A     +     P    A ++ L
Sbjct: 201 LKEYDQALADLKKAQEIAP-GDKAIQAEL 228


>gi|42521721|ref|NP_967101.1| hypothetical protein Bd0075 [Bdellovibrio bacteriovorus HD100]
 gi|39574251|emb|CAE77755.1| conserved hypothetical protein with TPR-domain [Bdellovibrio
           bacteriovorus HD100]
          Length = 981

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/94 (13%), Positives = 33/94 (35%), Gaps = 9/94 (9%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR---DFPFAGV 92
           +G   ++ +     +V D      +++   L+L+   F +A + F +  R   ++P    
Sbjct: 776 LGLNDKALKAFLSAAVLDPTDGEALFQAGKLYLETSRFEEAIQQFKRVQRLNANYPRTHY 835

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
                       +++G +  A    +      P 
Sbjct: 836 ------YIGKAAFASGDFATALEASKSEKKLNPN 863


>gi|325279773|ref|YP_004252315.1| Tetratricopeptide TPR_1 repeat-containing protein [Odoribacter
           splanchnicus DSM 20712]
 gi|324311582|gb|ADY32135.1| Tetratricopeptide TPR_1 repeat-containing protein [Odoribacter
           splanchnicus DSM 20712]
          Length = 561

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 26/111 (23%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y   ++ ++   ++KA  Y               K  +  A+ Q      + A     + 
Sbjct: 452 YNMGLILMQNGEYAKAIPYLKD------------KPNINLAYAQLMNNDNRAALETFRK- 498

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           I    ++  +DY  Y+  ++ A  I+D       TK M   + + ++   +
Sbjct: 499 IKM--QN-AMDY--YMQAVA-AARIKD-------TKEMAVSLQKAIQMQPD 536


>gi|298387597|ref|ZP_06997149.1| TPR domain-containing protein [Bacteroides sp. 1_1_14]
 gi|298259804|gb|EFI02676.1| TPR domain-containing protein [Bacteroides sp. 1_1_14]
          Length = 734

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 39/107 (36%), Gaps = 17/107 (15%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSR----DFPFAGVARKSLLMSAFVQYSAGKYQ 111
            +  ++  A  +LK++ +++A E + +           A   +K      +      KY 
Sbjct: 497 SEDILFPIADFYLKKERWNEAIEVYEEMETIGALQGRGAEYYQK----LGYALQKNKKYA 552

Query: 112 QAASLGEEYITQYP----ESKNVDYVY-----YLVGMSYAQMIRDVP 149
           +A     +  T  P     ++++   Y     Y   +SY + + +  
Sbjct: 553 EAIDAYLKADTLKPDNIWNNRHLAICYRLNRNYQAALSYYKKVEEAT 599


>gi|254412715|ref|ZP_05026488.1| Transglycosylase SLT domain protein [Microcoleus chthonoplastes PCC
           7420]
 gi|196180450|gb|EDX75441.1| Transglycosylase SLT domain protein [Microcoleus chthonoplastes PCC
           7420]
          Length = 789

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 50/163 (30%), Gaps = 35/163 (21%)

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
           M A   +   KY QA++   +     PE+ N  Y      + +AQ   D           
Sbjct: 297 MIAVGYWRDRKYGQASAAYAK----APETSNNAY-LVARALKFAQQYAD----------A 341

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
            +   ++V  + ++     A   +   +                    + A+P    V+ 
Sbjct: 342 KRAYKQMVSDFPDAEETPAALVELAQLQPD------------------IEAVPYLDEVVE 383

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            +   E A EA+    E    L     A E    + + Y +  
Sbjct: 384 RFP--ERAGEALLVKAETLERLGSYQAAEEARKQLIDEYGESD 424



 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 72/214 (33%), Gaps = 30/214 (14%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              +      +  +A+ F ++  ++ A   + Q   DFP A     +L+  A        
Sbjct: 317 KAPETSNNAYLVARALKFAQQ--YADAKRAYKQMVSDFPDAEETPAALVELA----QLQP 370

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
             +A    +E + ++P  +       +   +  ++         + +   +   ++++ Y
Sbjct: 371 DIEAVPYLDEVVERFP--ERAGEALLVKAETLERL--------GSYQAAEEARKQLIDEY 420

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
             S              +  AA   ++ R + + G   AA    + +         A +A
Sbjct: 421 GES--------------DAAAAYRWQVARSHAESGNVEAAWEWAKPITTENPHRFLARQA 466

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
              + +    L    +A+     +   +PQ Y+A
Sbjct: 467 GFWVGKWARELGHRQDAQAAFEQVITNHPQSYYA 500


>gi|251794204|ref|YP_003008935.1| hypothetical protein Pjdr2_0168 [Paenibacillus sp. JDR-2]
 gi|247541830|gb|ACS98848.1| TPR repeat-containing protein [Paenibacillus sp. JDR-2]
          Length = 581

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 27/69 (39%), Gaps = 3/69 (4%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++A   L+E  F++A     +   + P    AR      A   Y  G + +A +   E +
Sbjct: 160 DQARKLLEEGKFTEAVRILEKIIEEQPEFLAARN---NLALAYYYMGMFDKAMATIREAL 216

Query: 122 TQYPESKNV 130
              P + + 
Sbjct: 217 ELEPGNLHA 225


>gi|148683515|gb|EDL15462.1| mCG20642 [Mus musculus]
          Length = 335

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 38/99 (38%), Gaps = 2/99 (2%)

Query: 1   MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQRE 59
           +  V      I +A   +L   AL+   +I  C L     Q + D  L+++  D    + 
Sbjct: 215 LRYVDSSKAVIEKADRSRLQPIALSCVLNIGACKLKMSNWQGAIDSCLEALEMDPSNTKA 274

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
           +Y KA  +   + + +A     +     P    A ++ L
Sbjct: 275 LYRKAQGWQGLKEYDQALADLKKAQEIAP-GDKAIQAEL 312


>gi|74151669|dbj|BAE29632.1| unnamed protein product [Mus musculus]
 gi|74185251|dbj|BAE30104.1| unnamed protein product [Mus musculus]
          Length = 370

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 38/99 (38%), Gaps = 2/99 (2%)

Query: 1   MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQRE 59
           +  V      I +A   +L   AL+   +I  C L     Q + D  L+++  D    + 
Sbjct: 250 LRYVDSSKAVIEKADRSRLQPIALSCVLNIGACKLKMSNWQGAIDSCLEALEMDPSNTKA 309

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
           +Y KA  +   + + +A     +     P    A ++ L
Sbjct: 310 LYRKAQGWQGLKEYDQALADLKKAQEIAP-GDKAIQAEL 347


>gi|13385854|ref|NP_080628.1| peptidyl-prolyl cis-trans isomerase D [Mus musculus]
 gi|23396571|sp|Q9CR16|PPID_MOUSE RecName: Full=Peptidyl-prolyl cis-trans isomerase D; Short=PPIase
           D; AltName: Full=40 kDa peptidyl-prolyl cis-trans
           isomerase; AltName: Full=Cyclophilin-40; Short=CYP-40;
           AltName: Full=Rotamase D
 gi|12834051|dbj|BAB22767.1| unnamed protein product [Mus musculus]
 gi|12851478|dbj|BAB29056.1| unnamed protein product [Mus musculus]
 gi|15079319|gb|AAH11499.1| Peptidylprolyl isomerase D (cyclophilin D) [Mus musculus]
 gi|18044681|gb|AAH19778.1| Peptidylprolyl isomerase D (cyclophilin D) [Mus musculus]
 gi|26342048|dbj|BAC34686.1| unnamed protein product [Mus musculus]
          Length = 370

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 38/99 (38%), Gaps = 2/99 (2%)

Query: 1   MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQRE 59
           +  V      I +A   +L   AL+   +I  C L     Q + D  L+++  D    + 
Sbjct: 250 LRYVDSSKAVIEKADRSRLQPIALSCVLNIGACKLKMSNWQGAIDSCLEALEMDPSNTKA 309

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
           +Y KA  +   + + +A     +     P    A ++ L
Sbjct: 310 LYRKAQGWQGLKEYDQALADLKKAQEIAP-GDKAIQAEL 347


>gi|332345495|gb|AEE58829.1| cellulose synthase operon protein C [Escherichia coli UMNK88]
          Length = 1157

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 77/236 (32%), Gaps = 36/236 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197
             Q         +  +V R   S  V      +   G+   A             ++ + 
Sbjct: 557 RAQWN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 611 DWAQQRRDYTAARAAYQNVLTREP---ANADAILGLTEVDIAAGDKAAARSQLAKL 663



 Score = 35.9 bits (82), Expect = 5.9,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + ++ P      Y   L
Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537


>gi|322502894|emb|CBZ37976.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 622

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 29/80 (36%), Gaps = 12/80 (15%)

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAE-----HAEEAMARLVEAYVALALMDEAREV 249
            IGR ++   EY AA   F    A Y   E        E++  L   Y  L  +DEA + 
Sbjct: 53  NIGRVFIDMKEYGAAENAFTEAAAIYEQVEGDKSLEYAESLELLAFCYTHLKFLDEAEKA 112

Query: 250 ----VSLIQ---ERYPQGYW 262
               + + +     Y    W
Sbjct: 113 FKDSIRIFRDQCYNYGNNSW 132


>gi|320193957|gb|EFW68590.1| Cellulose synthase operon protein C [Escherichia coli WV_060327]
          Length = 1140

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 77/235 (32%), Gaps = 34/235 (14%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 426 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 482

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   +    
Sbjct: 483 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAHINSLPHAQ 542

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK-----------EVEIGR 198
           ++          +  +V R  N   ++ A      G+   A             ++ +  
Sbjct: 543 WN--------SNIQELVNRLQNDQVLETANRLRENGKEAEAEAMLRQQPPSSRIDLTLAD 594

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 595 WAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 646


>gi|225563392|gb|EEH11671.1| transcriptional repressor [Ajellomyces capsulatus G186AR]
          Length = 876

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 20/143 (13%), Positives = 44/143 (30%), Gaps = 22/143 (15%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108
            D    +  Y     ++ +  + KAYE + Q        P              + Y   
Sbjct: 219 ADNSDAQSWYLLGRCYMSQAKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIN 272

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +Y+ A       I   P    +  V+Y +G +  +   +   D       L    R  + 
Sbjct: 273 QYRDALDAYSRAIRLNP---YISEVWYDLG-TLYESCNNQTND------ALDAYRRAADL 322

Query: 169 YTNSPYVKGARFYVTVGRNQLAA 191
              + ++   +  + + ++  A 
Sbjct: 323 DPTNTHI---KSRLQLLQSGQAG 342


>gi|167041671|gb|ABZ06416.1| putative TPR domain protein [uncultured marine microorganism
           HF4000_009L19]
          Length = 516

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 23/67 (34%), Gaps = 3/67 (4%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
            D R  + +Y+  +  L+  N   A E F Q     P   +   +       ++ +G   
Sbjct: 361 ADPRRVQPLYQIGLASLRLGNVDDAREAFEQVVARSPTHVL---AQFNLGMARFRSGDVG 417

Query: 112 QAASLGE 118
            A    +
Sbjct: 418 AALRNFQ 424



 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 37/120 (30%), Gaps = 29/120 (24%)

Query: 96  SLLMS-AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           + L   A   +  G+Y++A       I             Y +G++  ++          
Sbjct: 333 ADLELVARTSFRVGEYEKAIDYYRRLID---ADPRRVQPLYQIGLASLRL--------GN 381

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
                +   ++V R                    LA   + + R+  + G+  AA+  FQ
Sbjct: 382 VDDAREAFEQVVARSPTH---------------VLAQFNLGMARF--RSGDVGAALRNFQ 424


>gi|194435786|ref|ZP_03067889.1| cellulose synthase operon protein C [Escherichia coli 101-1]
 gi|253771639|ref|YP_003034470.1| cellulose synthase subunit BcsC [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254163452|ref|YP_003046560.1| cellulose synthase subunit BcsC [Escherichia coli B str. REL606]
 gi|300927975|ref|ZP_07143532.1| tetratricopeptide repeat protein [Escherichia coli MS 187-1]
 gi|194425329|gb|EDX41313.1| cellulose synthase operon protein C [Escherichia coli 101-1]
 gi|242379048|emb|CAQ33848.1| oxidase involved in cellulose synthesis [Escherichia coli
           BL21(DE3)]
 gi|253322683|gb|ACT27285.1| cellulose synthase operon C domain protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253975353|gb|ACT41024.1| cellulose synthase subunit [Escherichia coli B str. REL606]
 gi|253979509|gb|ACT45179.1| cellulose synthase subunit [Escherichia coli BL21(DE3)]
 gi|300463982|gb|EFK27475.1| tetratricopeptide repeat protein [Escherichia coli MS 187-1]
 gi|323959461|gb|EGB55118.1| cellulose synthase operon protein C [Escherichia coli H489]
 gi|323971388|gb|EGB66627.1| cellulose synthase operon protein C [Escherichia coli TA007]
          Length = 1157

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 77/236 (32%), Gaps = 36/236 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197
             Q         +  +V R   S  V      +   G+   A             ++ + 
Sbjct: 557 RAQWN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 611 DWAQQRRDYTAARAAYQNVLTREP---ANADAILGLTEVDIAAGDKAAARSQLAKL 663



 Score = 35.9 bits (82), Expect = 5.9,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + ++ P      Y   L
Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537


>gi|330502031|ref|YP_004378900.1| TPR repeat-containing protein [Pseudomonas mendocina NK-01]
 gi|328916317|gb|AEB57148.1| TPR repeat-containing protein [Pseudomonas mendocina NK-01]
          Length = 569

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 44/278 (15%), Positives = 95/278 (34%), Gaps = 82/278 (29%)

Query: 41  QSSRDVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
             ++  +   V +     ++ +  A++ L+ + + +A  Y  +            +S + 
Sbjct: 265 DDAKGEFSKLVQENPNDDDLRFSLALVCLEAEAWEEAIVYLEELVER--------RSHVD 316

Query: 100 SAFVQYSAGKYQQAA----SLGEEYITQYPESKNV------------------------- 130
           +    Y+ G+  +A     S  +EY    P +  +                         
Sbjct: 317 A--AHYNLGRAYEALNDNDSALQEYAQVGPSNDYLPAQQRQAELLFAQQRGEEASARLAQ 374

Query: 131 ------DYV--YYLV---GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
                 DY    YL+   G+S +  +          +   + ++  +E+Y N   +   R
Sbjct: 375 ARDAQPDYAIQLYLIEAEGLSNSGQV----------EPAWKAINDGLEQYPNDLNLLYTR 424

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRG-EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY- 237
             +   R+ LA  E ++ RY ++R  E+  A+      LA+       EEA   + +A+ 
Sbjct: 425 AMLAEKRDDLAQLETDL-RYIIEREPEHAMALNALGYTLAD--RTTRYEEARDLIAKAHQ 481

Query: 238 ----------------VALALMDEAREVVSLIQERYPQ 259
                             L  +DEA  ++    E++P 
Sbjct: 482 LNPDDPAILDSLGWVNYRLGNLDEAERLLRQALEKFPD 519


>gi|316977960|gb|EFV60996.1| serine/threonine-protein phosphatase 5 [Trichinella spiralis]
          Length = 490

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/146 (15%), Positives = 44/146 (30%), Gaps = 26/146 (17%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           V ++   + + ++A    K + + +A E + +       +     + L   +        
Sbjct: 13  VENIAEAKRLRQEANECFKNEQYERAIELYTDALK----YTPADPQLLGNRSLANLRIEL 68

Query: 110 YQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           Y  A +     I       +  YV  YY    +   +           KL L     +V+
Sbjct: 69  YGSALADATSAIEI-----DRGYVKGYYRRAQANMAL--------GKFKLALMDYEAVVK 115

Query: 168 RYTNSPYVKGARFYVTVGR---NQLA 190
                     A+  +   R    QLA
Sbjct: 116 VRPQDK---DAKNKLVECRRIVKQLA 138


>gi|313157909|gb|EFR57315.1| tetratricopeptide repeat protein [Alistipes sp. HGB5]
          Length = 657

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 51/139 (36%), Gaps = 17/139 (12%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D       + +A+L  +  ++++A E +++ +    ++          A V    G+ ++
Sbjct: 255 DSTNSLTYFNRAMLRTQIGDYNRALEDYDKVAL---YSPNNVLVYYNRAGVYAQLGEIEK 311

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL----MLQYMSRIVER 168
           AA      I  YP+  N  Y+Y   G      +R++  D +  K       + ++    R
Sbjct: 312 AAEDYTSAIKLYPDFANA-YIY--RG-----RLRELLRDPQGAKKDRDTAQKKIAEYRSR 363

Query: 169 YTNSPYV--KGARFYVTVG 185
            ++S Y             
Sbjct: 364 LSDSTYSIFADTTQRFDRL 382


>gi|50546166|ref|XP_500610.1| YALI0B07579p [Yarrowia lipolytica]
 gi|49646476|emb|CAG82843.1| YALI0B07579p [Yarrowia lipolytica]
          Length = 885

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 20/138 (14%), Positives = 45/138 (32%), Gaps = 22/138 (15%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108
            D    +  Y     ++ +Q ++KAYE + +        P              + Y   
Sbjct: 257 ADPLEAQSWYLLGRCYMAQQKYNKAYEAYQRAVYRDGRNP-TFWC-----SIGVLYYQIN 310

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +Y+ A       I   P    +  V+Y +G +  +   +   D       +    +  E 
Sbjct: 311 QYRDALDAYSRAIRLNP---YISEVWYDLG-TLYESCNNQVND------AIDAYQKAAEL 360

Query: 169 YTNSPYVKGARFYVTVGR 186
             ++P+++     +   R
Sbjct: 361 DPHNPHIQE---RLLQLR 375


>gi|152977377|ref|YP_001376894.1| TPR repeat-containing protein [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152026129|gb|ABS23899.1| Tetratricopeptide TPR_2 repeat protein [Bacillus cytotoxicus NVH
           391-98]
          Length = 503

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 78/222 (35%), Gaps = 49/222 (22%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           E+A  +++     +A       ++D+P  ++G         A   + +G   QA  L E 
Sbjct: 155 EEANRYIRNGQLEEAIATLEIVTKDYPEFWSGYN-----NLAIAHFQSGNVDQALKLTEM 209

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS------- 172
            + + P +        +  +    +      + +  + + + M  +   Y  S       
Sbjct: 210 ILEKNPGN--------MHALCNTLIFLYSIGEHKQVEALAEQMKSV---YPISFEHRLKL 258

Query: 173 -------PYVKGARFYVTVGRNQLAAKEVEIGRYYL------KRGEYVAAIPRFQLVLAN 219
                   Y   A  ++ + + Q    + ++  YY          +Y  A   +Q V+  
Sbjct: 259 GTTFATIGYFAHAYKWLKLLKRQ--GYDGDVSFYYWFAYASYMVKDYHTAEKMWQSVVEL 316

Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVV-SLIQERYPQG 260
           + D +          E + AL L DE ++V+   +++ + + 
Sbjct: 317 HPDKKG--------KEPWNALNLADEGQKVLFEELRKTFQES 350


>gi|284052144|ref|ZP_06382354.1| lytic transglycosylase, catalytic [Arthrospira platensis str.
           Paraca]
          Length = 564

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 37/110 (33%), Gaps = 12/110 (10%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY--SAGKYQQAASLGEEYITQYPESK 128
            +   A +        +  +  A  + L     Q   +AG+   A+    + + + P+S+
Sbjct: 179 GSTETASQSRQLLLSQYSDSEAA--AQLRWTLAQQGATAGRLDIASEWARQLVNKNPDSE 236

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
                 +++G             Q  +K   +    ++ RY  S Y   A
Sbjct: 237 LAPQATFMLG--------RWARQQGNSKDATKAFEYLLARYPESYYAWRA 278



 Score = 36.6 bits (84), Expect = 3.2,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 64/214 (29%), Gaps = 33/214 (15%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-----FAGVARKSLLMSAFVQYSAGK 109
           +  R +Y  A          ++   + +    FP         A    +  A       +
Sbjct: 90  KTPRNMYRHARGLWLGGKIPESRRAYQELIAAFPTQTDPGGEDAGLGRIRLA----RLVE 145

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            ++A  L  + +  +P                 ++         +T+   Q    ++ +Y
Sbjct: 146 PREALPLLNQVVENFPNH--AAEAVLDRANVLDKL--------GSTETASQSRQLLLSQY 195

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
           ++S             R  LA +    GR          A    + ++    D+E A +A
Sbjct: 196 SDSEAAAQ-------LRWTLAQQGATAGRL-------DIASEWARQLVNKNPDSELAPQA 241

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
              L           +A +    +  RYP+ Y+A
Sbjct: 242 TFMLGRWARQQGNSKDATKAFEYLLARYPESYYA 275


>gi|285019105|ref|YP_003376816.1| tpr domain protein; von willebrand factor, type a [Xanthomonas
           albilineans GPE PC73]
 gi|283474323|emb|CBA16824.1| putative tpr domain protein; von willebrand factor, type a
           [Xanthomonas albilineans]
          Length = 607

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 28/78 (35%), Gaps = 15/78 (19%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR---DFPFAGVARKSLLMSAFVQYSAG 108
            D   Q+ + +  V   ++ +F+ A + F         +                    G
Sbjct: 357 PDQVRQQRL-DTGVQAYRKGDFAAAQQQFEGVDSDVGWY-----------NLGNALARQG 404

Query: 109 KYQQAASLGEEYITQYPE 126
           +Y QA +  ++ +T +P+
Sbjct: 405 RYDQAIAAYDKALTLHPQ 422


>gi|196228955|ref|ZP_03127821.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
           Ellin428]
 gi|196227236|gb|EDY21740.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
           Ellin428]
          Length = 440

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 40/208 (19%), Positives = 65/208 (31%), Gaps = 49/208 (23%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAG-VARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           +  L      + KA    N   R  P A   A +      ++     K   A +   + +
Sbjct: 76  RGRLRAGRGEYDKALPDLNAAIRLKPSAEAYAHR-----GYIYQKQHKLDDALADFNQAL 130

Query: 122 TQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
              P+     Y   +L G+        V  D   TK  L  +   +    +S  V  AR 
Sbjct: 131 RLEPQH----YLALFLRGL--------VLGDTGDTKAALDDLDAALAIQPDSKEVLQARG 178

Query: 181 YVTVGRNQL------------------AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
            V V R +L                  A      G  YLK          F+  + +Y+ 
Sbjct: 179 QVHVLRKELDDAQADFERCIQLDPKDPAGHTGRGGVNYLKGD--------FKEAVEDYTQ 230

Query: 223 A----EHAEEAMARLVEAYVALALMDEA 246
           A        + +A+   AY  +  +D+A
Sbjct: 231 AVELLPKDPQPLAQRGYAYAGMNEVDKA 258


>gi|254411072|ref|ZP_05024850.1| hypothetical protein MC7420_550 [Microcoleus chthonoplastes PCC
           7420]
 gi|196182427|gb|EDX77413.1| hypothetical protein MC7420_550 [Microcoleus chthonoplastes PCC
           7420]
          Length = 173

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 9/74 (12%), Positives = 28/74 (37%), Gaps = 9/74 (12%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           Y+      +  ++  A ++  +          + V  ++ +       +AG+  +A +LG
Sbjct: 12  YQTGKATFERGDYRAAVKHLEKACTLINRN--SRVGGEAQMWLVTAYEAAGQQTEAIALG 69

Query: 118 EEYITQYPESKNVD 131
           ++         ++D
Sbjct: 70  QQLTK----HPDLD 79


>gi|156934928|ref|YP_001438844.1| hypothetical protein ESA_02777 [Cronobacter sakazakii ATCC BAA-894]
 gi|156533182|gb|ABU78008.1| hypothetical protein ESA_02777 [Cronobacter sakazakii ATCC BAA-894]
          Length = 730

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 59/190 (31%), Gaps = 45/190 (23%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCS-RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A     + ++  A E F+       P+  VA+ +  M   V  +      +A+  ++
Sbjct: 209 YLGAASAFYQGDYPAATERFSALKASSQPW--VAQTAAYMLMRVALNQ----SSAAAVDD 262

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
                      DY  +               D+ A +  L Y    ++ +    Y   AR
Sbjct: 263 -----------DYGLF----------DTTKIDKTAARQALAYSEAYLKAWPEGDYADSAR 301

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                             R Y    ++ A  PR++  L    DA+      A L+E    
Sbjct: 302 GMQR--------------RIYWYLQDWDALAPRYEQALKAAPDADALR---ALLLENDTK 344

Query: 240 LALMDEAREV 249
           L   D + + 
Sbjct: 345 LQSKDASGDT 354


>gi|115699987|ref|XP_792593.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115930468|ref|XP_001192487.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 2174

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 39/202 (19%), Positives = 71/202 (35%), Gaps = 39/202 (19%)

Query: 72   NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ-YPESK-- 128
            N+SKA E  +   +  P A +     ++    +  A KYQ A    E+ +    P  +  
Sbjct: 1599 NYSKAIEVLSSTVKVSPTAPL----YILLGKTEIKAKKYQPAVQSLEKALDLMKPWQERQ 1654

Query: 129  ----NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE---RYTNSPYVK----- 176
                    VYYL+GM + + I +V           +  +  ++    Y  + Y +     
Sbjct: 1655 SWPLEAAEVYYLIGMCHME-IPNV-------YKAYEAFNSAIKINPEYPEAYYQRGLTRT 1706

Query: 177  ---GAR-----FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA-- 226
                A+             +L    +    YY +RG Y   I      +    ++  A  
Sbjct: 1707 RLHQAKGILDFNRALALNPKLFQAYLSRAAYYGQRGRYSKGIYNCNQAIRLQPNSVRAYL 1766

Query: 227  -EEAMARLVEAYVALALMDEAR 247
               A+   + A+ ALA+ D  +
Sbjct: 1767 YRGALKYYISAH-ALAIKDLCQ 1787


>gi|13650078|gb|AAK37555.1|AF349572_1 SHOOT1 protein [Glycine max]
          Length = 359

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 33/110 (30%), Gaps = 16/110 (14%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           + +   K   + +A E F       P    A  +    A       + Q A S  EE   
Sbjct: 247 EGLQLYKNGKYDEALEKFESILGSKPEPEEAAVASYNVACCYSKLNQIQAALSSLEE--A 304

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
                ++             + IR  P D    +   +    +++R+  S
Sbjct: 305 LNTGFED------------FKRIRTDP-DLANAR-ASEEFDPLLKRFDES 340


>gi|53804574|ref|YP_113792.1| hypothetical protein MCA1330 [Methylococcus capsulatus str. Bath]
 gi|53758335|gb|AAU92626.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath]
          Length = 473

 Score = 38.2 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 56/187 (29%), Gaps = 46/187 (24%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY-------SAGKYQQAASLGEEYITQY 124
           N  ++ +YF         + V  +         Y       + GK  Q   + EE I +Y
Sbjct: 276 NPQESVDYFTAI------SEVGTRQQQDV--AHYGLALALVAQGKIGQGRPMLEELIRRY 327

Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
           PE  +           +   + D   + +            ++R+  +         +  
Sbjct: 328 PEQSH-----------FFNALADAEREAKTYPAAFAIYEEALKRFPGNR-----ALTLNY 371

Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
            +              ++ G+ + A  R Q  L ++       E    L +A+  L    
Sbjct: 372 AQTL------------VRAGKPLEARKRLQDYLLHFPATPEVYE---LLAQAHSQLGNEA 416

Query: 245 EAREVVS 251
           E+   ++
Sbjct: 417 ESHRYLA 423


>gi|301058339|ref|ZP_07199372.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
 gi|300447575|gb|EFK11307.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
          Length = 262

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 28/100 (28%), Gaps = 10/100 (10%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           Y+  L I   +    +                 D +   E++ +A    +E N+ +A   
Sbjct: 3   YRLLLPISLFLIAFMMAPSAFGQDS-------RDGKAWEELFFQANQHYREGNYQEAIAG 55

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +NQ  R       +           +   +   A    E 
Sbjct: 56  YNQLLR---MGHDSSLIQYNLGNAWFRLNQVGHAILAYER 92


>gi|301059208|ref|ZP_07200146.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
 gi|300446698|gb|EFK10525.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
          Length = 650

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/159 (11%), Positives = 56/159 (35%), Gaps = 24/159 (15%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           L K A+++  +    FL   + +S+R          + + + +  A  + ++   +++ +
Sbjct: 7   LLKRAISVLLAGMALFLFACQPRSTRSF----TEATQTRSDAFSVAEKYRQKGELAQSLK 62

Query: 79  YF-----NQCSR-DFPFAGVARK--SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           Y+             P   +A +  + +            + A +  EE   +YP+   +
Sbjct: 63  YYRSFLTQAVEDDRIP---LALQRVAEIEL-----KLNNPENALASLEELSRRYPDYAWM 114

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
             V Y +     Q+       + +    + ++ +    +
Sbjct: 115 PEVRYQISAILYQL----GRYEASAHKAILWLDQYQRHF 149


>gi|269961755|ref|ZP_06176115.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269833538|gb|EEZ87637.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 391

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 23/191 (12%), Positives = 51/191 (26%), Gaps = 44/191 (23%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY--- 120
           A  ++      +A + F Q   + P    +    L++ +      ++++A     +    
Sbjct: 114 AKDYMASGFLDRAEKIFEQLVEE-PDHRESALQQLVTIY--QQTREWEKAIHYANQLAKM 170

Query: 121 ------ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
                 I                   +   +  +      T   +Q+  + +        
Sbjct: 171 GKKRTRIRANIAH-------------FWCELAMLDQADGNTSKAIQHFKKALSEDPKCVR 217

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
              A   +                 YL+  +Y   I     VL    D +   + +  + 
Sbjct: 218 ASIALGRI-----------------YLESEDYKHTIKYLTGVLE--QDKDFISDVLPTIA 258

Query: 235 EAYVALALMDE 245
           E Y  L   DE
Sbjct: 259 ECYHHLGQEDE 269


>gi|257463168|ref|ZP_05627568.1| hypothetical protein FuD12_04891 [Fusobacterium sp. D12]
 gi|317060760|ref|ZP_07925245.1| predicted protein [Fusobacterium sp. D12]
 gi|313686436|gb|EFS23271.1| predicted protein [Fusobacterium sp. D12]
          Length = 604

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM--SAFVQYSAGKYQQA 113
           +Y KA    +E+ + +AYE F+   R FP++ V +  LL       QY   ++++A
Sbjct: 29  LYTKAKKQYQERKYQEAYENFSLLKRTFPYSRVQKSKLLDYYLGLTQYHLEQWEEA 84


>gi|224534365|ref|ZP_03674943.1| TPR domain protein [Borrelia spielmanii A14S]
 gi|224514467|gb|EEF84783.1| TPR domain protein [Borrelia spielmanii A14S]
          Length = 379

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 68/212 (32%), Gaps = 36/212 (16%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           K+ N+ KA  Y+ +C    P       +L        S   Y++A  + EEY+   PE+ 
Sbjct: 70  KKNNYDKAIVYYQRCLVKHPNNNY---ALFGLGDCYRSLDDYKKATDIWEEYLKFDPEN- 125

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV--------KGARF 180
                     ++    +       +  +   Q   +++E    + Y            + 
Sbjct: 126 ----------ITVLTRVASSYRKLKNFQKSKQTYLKVMELMPENDYALVGIGHLYYDFKE 175

Query: 181 YVTVGRNQLAAKEVE-----------IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
           Y    +  L   E+            IG  Y K  E+   I  F+  L     +     A
Sbjct: 176 YKEALKYWLKMYELNQSKVDVRVLTSIGNCYRKLREFTRGIYFFKKALEI---SPSNFYA 232

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +  L + Y       EA +    I E+ P+  
Sbjct: 233 VFGLADCYRGNKDYKEALKYWLDIIEKDPKNN 264


>gi|253701165|ref|YP_003022354.1| hypothetical protein GM21_2555 [Geobacter sp. M21]
 gi|251776015|gb|ACT18596.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. M21]
          Length = 250

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/161 (10%), Positives = 47/161 (29%), Gaps = 46/161 (28%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSR--DFPF---------------AGVARKSL------- 97
              V +L+ + +  A E F        +                     +++L       
Sbjct: 102 NLGVNYLEMKRWDDAIEQFKLVQDDIFYQGQDGAAINLGLAYLGKGEY-QQALSVLRNAV 160

Query: 98  ----------LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
                     L    V ++  K + A    ++ +     ++     YY +G++  ++   
Sbjct: 161 GKNSSDPRIRLNLGRVYFALEKNELAIEEYQKALQL---NRFYASAYYHLGLAQMKL--- 214

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
                +           +V    +S   + +R Y+ + + +
Sbjct: 215 -----KDADAAKSAFQDVVRLAPDSEIGQLSREYLELLKVR 250


>gi|149200006|ref|ZP_01877032.1| hypothetical protein LNTAR_03474 [Lentisphaera araneosa HTCC2155]
 gi|149136879|gb|EDM25306.1| hypothetical protein LNTAR_03474 [Lentisphaera araneosa HTCC2155]
          Length = 761

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/146 (12%), Positives = 51/146 (34%), Gaps = 9/146 (6%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           LTI + +A+     +++       + +          Y   + + +   + +A   F + 
Sbjct: 242 LTIQYVLALIRSKKYDQARGALASIKNPNAEEEAWANYALGICYYQLGLYKQALISFEKS 301

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
             +  F   + K+L    +         +A  L + + +++P S        L    + +
Sbjct: 302 LLNQNFTE-SPKALAYLIYCHLQVKDMPKALELSKVFDSKHPTSS-------LRAEIHYK 353

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERY 169
               +  +Q  + L ++ +   +  Y
Sbjct: 354 NSL-LALEQNNSTLAVKELQTAINVY 378



 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 88/263 (33%), Gaps = 28/263 (10%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE--VYEKAVLFLKEQNFSKAYE 78
              + +    A   +   E   + ++Y    +     +E  +YE   L L++   ++A  
Sbjct: 89  NLRIVVQLKKAALLITKKEFDKAEELYKKITSAETNYQEHALYEYGRLLLEQGKNNEAVT 148

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYS-------AGKYQQAASLGEEYITQYPESKNVD 131
            F   S      G A    +   +  Y+          Y  A            +     
Sbjct: 149 TFLDLSSK----GKAEDKEVR-IYAHYALSSLYLGQENYSSAEKHLNTLTNITKDHSLKT 203

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLM-----LQYMSRIVERYT----NSPYVKGARFYV 182
             + L+    A   RD         L       + ++++  +Y      S     AR  +
Sbjct: 204 QAFILLIQLLATQERDAELITTHKTLATLNPHKENLNQLTIQYVLALIRSKKYDQARGAL 263

Query: 183 TVGRNQLAAKE----VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
              +N  A +E      +G  Y + G Y  A+  F+  L N  +   + +A+A L+  ++
Sbjct: 264 ASIKNPNAEEEAWANYALGICYYQLGLYKQALISFEKSLLN-QNFTESPKALAYLIYCHL 322

Query: 239 ALALMDEAREVVSLIQERYPQGY 261
            +  M +A E+  +   ++P   
Sbjct: 323 QVKDMPKALELSKVFDSKHPTSS 345


>gi|146092796|ref|XP_001466521.1| hypothetical protein [Leishmania infantum]
 gi|134070884|emb|CAM69560.1| conserved hypothetical protein [Leishmania infantum JPCM5]
          Length = 693

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 6/70 (8%)

Query: 67  FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
           ++++  + +A E       +FP +  A    LM A+  Y  G Y +AASL E+     P 
Sbjct: 61  YIRDHQYEEAVELLATQLEEFPRSRAA--VSLM-AYCYYMMGDYGEAASLYEQLTKICPN 117

Query: 127 SKNVDY-VYY 135
            +   Y VYY
Sbjct: 118 IEE--YRVYY 125


>gi|107100090|ref|ZP_01364008.1| hypothetical protein PaerPA_01001111 [Pseudomonas aeruginosa PACS2]
          Length = 268

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 20/55 (36%), Gaps = 4/55 (7%)

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
            Y +G+ Y         DQR       Y  R+V  +  +   + A+  +   R +
Sbjct: 94  LYQIGLIYMSRYN----DQRDDAKATDYFQRVVREFPGTHAAEHAQARLLAMRQR 144


>gi|56751313|ref|YP_172014.1| hypothetical protein syc1304_c [Synechococcus elongatus PCC 6301]
 gi|56686272|dbj|BAD79494.1| hypothetical protein [Synechococcus elongatus PCC 6301]
          Length = 923

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/117 (11%), Positives = 36/117 (30%), Gaps = 14/117 (11%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
               +  Y++A+   +   F  A    ++   D P    A  +L +     Y   + +  
Sbjct: 4   TAAAQHDYQQAIAAYQAGEFEAAIAQLDRLLGDVP--DWAA-ALGLQGLCYYCCDQRETG 60

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
            +L    I   P              ++   + ++   Q      L+ +++ +    
Sbjct: 61  ITLLRRAIALDPTDP-----------THFNNLGNLLQRQGHLTEALERLTQALAIDP 106


>gi|332661980|ref|YP_004451449.1| sulfatase-modifying factor protein [Haliscomenobacter hydrossis DSM
           1100]
 gi|332337477|gb|AEE54576.1| Sulphatase-modifying factor protein [Haliscomenobacter hydrossis
           DSM 1100]
          Length = 655

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 40/115 (34%), Gaps = 18/115 (15%)

Query: 85  RDFPFAGVARKSLLMSAFVQY--SAGKYQQ-----AAS-----LGEEYITQYPESKNVDY 132
             +P       +        Y   A +Y+Q     A +        ++  +YP SK  D 
Sbjct: 277 TKYPNGKYVVIAK-GLISAYYFGDAAEYEQMAWERALATNTIKAYTDFHDKYPRSKYSD- 334

Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
               + +    ++ +     + TK     + R ++    SPY+K A+  V   R 
Sbjct: 335 ----LALDALDILEEKEEWDKVTKTRQAPLLRYIQLNPQSPYLKEAQRLVDALRE 385


>gi|258624849|ref|ZP_05719777.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|258582847|gb|EEW07668.1| conserved hypothetical protein [Vibrio mimicus VM603]
          Length = 610

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 39/123 (31%), Gaps = 7/123 (5%)

Query: 14  AWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF 73
           A  +   + AL     +    L      +S  +  D      ++ + Y +A     +  +
Sbjct: 312 AALFMFRRGALFTVALLIGTSLPNQHAWASPWLNQDQQAMRDFESKQYSQAAEGFSDPRW 371

Query: 74  SKAYEYFNQCSRDFPFAGVAR------KSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
             A  Y N           ++       +    A     AG   +A SL E+ + + P  
Sbjct: 372 QGAARY-NAGDYQGAIDAYSQVDNPDLDTQYNLANAYAQAGDLSKARSLYEQVLEKEPNH 430

Query: 128 KNV 130
           ++ 
Sbjct: 431 QDA 433


>gi|220917391|ref|YP_002492695.1| hypothetical protein [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219955245|gb|ACL65629.1| tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 243

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 6/27 (22%), Positives = 10/27 (37%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYIT 122
           + L      Y  G +  A +  E Y+ 
Sbjct: 122 AELARGDAHYKLGDWDAALASYERYLK 148


>gi|146100529|ref|XP_001468885.1| hypothetical protein [Leishmania infantum]
 gi|134073254|emb|CAM71977.1| conserved hypothetical protein [Leishmania infantum JPCM5]
          Length = 622

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 29/80 (36%), Gaps = 12/80 (15%)

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAE-----HAEEAMARLVEAYVALALMDEAREV 249
            IGR ++   EY AA   F    A Y   E        E++  L   Y  L  +DEA + 
Sbjct: 53  NIGRVFIDMKEYGAAENAFTEAAAIYEQVEGDKSLEYAESLELLAFCYTHLKFLDEAEKA 112

Query: 250 ----VSLIQ---ERYPQGYW 262
               + + +     Y    W
Sbjct: 113 FKDSIRIFRDQCYNYGNNSW 132


>gi|126321340|ref|XP_001379379.1| PREDICTED: similar to aspartate beta-hydroxylase [Monodelphis
           domestica]
          Length = 730

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 39/110 (35%), Gaps = 21/110 (19%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK----EVEIGRYYLKRGEYVAAIP 211
           +  +     +V +Y  SP  +  +       + LA K    EV      LKR     AI 
Sbjct: 330 EDAMNAFEELVRKYPQSPRARYGKA---QCEDDLAEKRRSNEV------LKR-----AIE 375

Query: 212 RFQLVLANYSDAEH--AEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            +Q V A+  +      + ++ R  E    L  M  +   +  +   +P 
Sbjct: 376 TYQEV-ADLPNVPADLVKLSLKRQSERQQFLGHMRGSLVTLQKLVHLFPN 424


>gi|145495950|ref|XP_001433967.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124401088|emb|CAK66570.1| unnamed protein product [Paramecium tetraurelia]
          Length = 463

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 42/146 (28%), Gaps = 39/146 (26%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA---------------------- 90
           D ++    Y  A L+L ++ F  A  YF++     P+                       
Sbjct: 316 DPKFADAYYLIANLYLDQKKFEDAIIYFDKTIDLDPYHAEAFNNKGVALKQLKKYEEAFI 375

Query: 91  --GVARKSLLMSAFVQY-------SAGKYQQAASLGEEYITQYPE--SKNVDYVYYLVGM 139
               A +S   + F  Y           Y  A       +   P   S       Y +G+
Sbjct: 376 CFEKAIQSDPNNPFGHYNKGCSLIKTKNYVDAIICLNNALNLNPTCSSP-----QYEIGL 430

Query: 140 SYAQMI-RDVPYDQRATKLMLQYMSR 164
           S+  +I R V    +  K     +  
Sbjct: 431 SFYYLINRSVFKSPKLDKKDYHQLQD 456


>gi|124024101|ref|YP_001018408.1| hypothetical protein P9303_24101 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964387|gb|ABM79143.1| Hypothetical protein P9303_24101 [Prochlorococcus marinus str. MIT
           9303]
          Length = 725

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 44/139 (31%), Gaps = 31/139 (22%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           GK ++A       +   P            G   A +  D   D        Q   + V+
Sbjct: 122 GKTEEAKQAYRNALQLNPAHAGAA------GNLGALLTDDGELD-----EAEQLFVKAVD 170

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
           +Y N+         +  GR  LA K            E+ AAI ++Q+ L     A  + 
Sbjct: 171 QYPNN-----VNLRINYGR-LLAEKA-----------EHAAAIMQYQIAL---PLAPQSP 210

Query: 228 EAMARLVEAYVALALMDEA 246
           E       A      ++EA
Sbjct: 211 ELHYNFANALKEEGDVEEA 229


>gi|94971627|ref|YP_593675.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94553677|gb|ABF43601.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
           Ellin345]
          Length = 398

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 78/251 (31%), Gaps = 34/251 (13%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
              AVC L       ++D     ++D     ++   A     + NF  A     + +   
Sbjct: 3   LIGAVCLLSLCASVFAQD-----LSDKAEYDKLKAHATELFNQNNFLAALPELQKLADQN 57

Query: 88  P---------FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
           P            +A K+LL +            A     E       S+ ++Y      
Sbjct: 58  PKDYAVLEALGFALASKALLET-DADQRKADRIAARKHLLEAKKLGDNSEMINY------ 110

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE----- 193
           +         P      K + + M      +     +  A+      +  L   E     
Sbjct: 111 LLETTPEDGTPRKFSDNKEIERLMQTAEAHFAKGE-LNEAKA--GYLQVLLLDPENYAAA 167

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE--VVS 251
           +  G  Y K G+Y ++I  FQ  +   ++ E A        +A   L   DEAR   + +
Sbjct: 168 LFTGDVYFKDGKYCSSIQWFQKAIEIDANTETAYR---YWGDALDHLGQKDEARRKFMEA 224

Query: 252 LIQERYPQGYW 262
           +I + Y    W
Sbjct: 225 VIADPYNNRPW 235


>gi|21110817|gb|AAM39201.1| polysaccharide deacetylase [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 911

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 36/127 (28%), Gaps = 20/127 (15%)

Query: 62  EKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           E+ +   KE+ +  A E F             A  +     FV Y  G++ ++A   E  
Sbjct: 802 ERGLQLYKEKRYVDAAEQFAEALKLR---PDFA-LAANNLGFVYYRQGRFAESARWLENT 857

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPY--DQRATKLMLQYMSRIVERYTNSPYVKGA 178
           +   P             ++Y  +        D+   +        +          + A
Sbjct: 858 LKIDPS----------RAVAYLNLGDAYAKAGDRDKARKAYSTYLELQ---PQGSGAEQA 904

Query: 179 RFYVTVG 185
           R  +   
Sbjct: 905 RTQLQSL 911


>gi|85709885|ref|ZP_01040950.1| putative Zn-dependent protease [Erythrobacter sp. NAP1]
 gi|85688595|gb|EAQ28599.1| putative Zn-dependent protease [Erythrobacter sp. NAP1]
          Length = 459

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 7/58 (12%), Positives = 22/58 (37%), Gaps = 3/58 (5%)

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            +  + +P +  +  +    A+  +   + ++A +  +  +   P +    Y   L G
Sbjct: 266 QRVMQRYPESDQSVPARYARAYAYHKDAQVEKAVAEADSLLGTEPNNP---YFLELKG 320


>gi|325663509|ref|ZP_08151919.1| hypothetical protein HMPREF0490_02660 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325470408|gb|EGC73639.1| hypothetical protein HMPREF0490_02660 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 181

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 65/167 (38%), Gaps = 26/167 (15%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           E+ +   +++ + +A E F +   +        ++ L    V +   KY++A +  ++  
Sbjct: 33  EEGMELFEQKKYDEALELFQK---EAESGEEQAEAYLGMGLVYWEQQKYEEARNAFQK-- 87

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                ++    +Y L+     Q+           +  L + +  ++   NS         
Sbjct: 88  ALNAGTEKTGTLYNLLASCEMQL--------GDYQSALNHYNLGLQSEGNS---AELTQE 136

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           +    NQ+AA E    + Y    ++ +A  + +  +A Y D E A++
Sbjct: 137 MEF--NQIAAYE----KLY----DWESAKAKIEEYIAKYPDDEAAKK 173


>gi|299755197|ref|XP_001828491.2| TPR-containing protein Mql1 [Coprinopsis cinerea okayama7#130]
 gi|298411113|gb|EAU93324.2| TPR-containing protein Mql1 [Coprinopsis cinerea okayama7#130]
          Length = 1127

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 62/169 (36%), Gaps = 39/169 (23%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS-------A 107
           +    ++   +++ ++  + ++ E F++  R+ P + +A       A + +         
Sbjct: 109 KANEILFRLGIIYKQQGKYQESLECFDRILRN-PPSPLAH------ADIWFQIGHVFEQQ 161

Query: 108 GKYQQAASLGEEYITQYPESKNV----DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
             Y +A    E  +   P    V     ++Y+  G ++               L +QY++
Sbjct: 162 KDYHRAKDAYERVVMDNPSHAKVLQQLGWLYHQDGSAFQNQD-----------LAIQYLT 210

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           + +E          A+ +  +GR  +A ++      Y     Y  A+ R
Sbjct: 211 KSLEADP-----TDAQSWYLLGRAYMAGQKYNKA--Y---EAYQQAVYR 249



 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 43/142 (30%), Gaps = 22/142 (15%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108
            D    +  Y     ++  Q ++KAYE + Q        P              + +   
Sbjct: 215 ADPTDAQSWYLLGRAYMAGQKYNKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYFQIN 268

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +Y+ A       I   P    +  V++ +G S  +   +   D       +   +R  E 
Sbjct: 269 QYRDALDAYSRAIRINP---YISEVWFDLG-SLYESCNNQITD------AIDAYARASEL 318

Query: 169 YTNSPYVKGARFYVTVGRNQLA 190
              +P        + + R   A
Sbjct: 319 DPTNP---AITQRLQLLRQAQA 337


>gi|262196490|ref|YP_003267699.1| hypothetical protein Hoch_3304 [Haliangium ochraceum DSM 14365]
 gi|262079837|gb|ACY15806.1| Tetratricopeptide repeat protein [Haliangium ochraceum DSM 14365]
          Length = 433

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 25/52 (48%), Gaps = 3/52 (5%)

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
             + AA  R++ +L  + D+    +A+  L  +Y    L D+    +++ ++
Sbjct: 114 ERFDAAAARYEQLLRMFPDSRLVPDALYNLGLSYE---LRDQPERALAMYRQ 162


>gi|168699317|ref|ZP_02731594.1| hypothetical protein GobsU_07347 [Gemmata obscuriglobus UQM 2246]
          Length = 415

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/146 (13%), Positives = 44/146 (30%), Gaps = 30/146 (20%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQ 111
                ++Y +    L   ++ +A E +++  R  P  FAG   ++           G   
Sbjct: 7   TDDATDLYTRGHNALTAGDYQEAVECYSRAIRLRPGDFAGYRFRA-----HAYIELGDRV 61

Query: 112 QAASLGEEYITQYPESK--NVDYVYYLVGMSYAQM-IRDVPY------------------ 150
           +A +  ++ I   P+      D    L         I D                     
Sbjct: 62  RALNDLDQAIRLKPDDAQTYADRAEELFAQVQYDQAITDCDRALKLDPKRVALVALRGRC 121

Query: 151 --DQRATKLMLQYMSRIVERYTNSPY 174
             D+  ++   +  +  ++   N+ Y
Sbjct: 122 HADRGDSEAAFRDFAAAIDADPNNAY 147


>gi|156846776|ref|XP_001646274.1| hypothetical protein Kpol_1032p8 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156116949|gb|EDO18416.1| hypothetical protein Kpol_1032p8 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 343

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 10/144 (6%), Positives = 39/144 (27%), Gaps = 20/144 (13%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTD--VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
            ++    L         +V  + +++   +    +  +    +  +N+  A + +++   
Sbjct: 67  ITLKGLGLQNVSDVVELEVKNEEISEDKKKEAEALKLEGNKQMSLKNYKSAIDKYSKAIE 126

Query: 86  DFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
            +P      + ++             +  A       I   P         Y        
Sbjct: 127 IYPSNPFYYSNRAA-----AYQMIEDFTNAVLDANTAIKLDPT--------YSKA---YS 170

Query: 144 MIRDVPYDQRATKLMLQYMSRIVE 167
            +      +   +  +    +++E
Sbjct: 171 RLGAAKLAEGNNEDAVHAFKKVLE 194


>gi|189500993|ref|YP_001960463.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeobacteroides
           BS1]
 gi|189496434|gb|ACE04982.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeobacteroides
           BS1]
          Length = 214

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 53/163 (32%), Gaps = 30/163 (18%)

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
            ++ +           Y +A    E  ++  P+S          G++    +    ++++
Sbjct: 67  PQAYIRLGNEYAKQQLYDKAVEAYENALSLNPQS----------GITVYPALGAAYFNRQ 116

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
                L Y  + +       Y                    +IG  YL   +   AI  +
Sbjct: 117 QYTEALGYFKKSL------EYSPEDSLRF-----------YDIGNVYLHLQKCDLAIEAY 159

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
              + N   +   +EA   L   Y+      +A+++ + +QE+
Sbjct: 160 LQAIEN---STAFQEAHYNLAICYIRTGQKAKAQDIYAWLQEK 199


>gi|253699349|ref|YP_003020538.1| peptidoglycan-binding LysM [Geobacter sp. M21]
 gi|251774199|gb|ACT16780.1| Peptidoglycan-binding LysM [Geobacter sp. M21]
          Length = 204

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 23/53 (43%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
                + E + +A     ++N+ +A E F+   + FP +G A  + L  A   
Sbjct: 146 PAQAGEAESFHRARKAYLDRNYQRALELFSSFLKKFPRSGYAADASLYRADCY 198



 Score = 35.5 bits (81), Expect = 8.9,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 15/39 (38%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
           R  +  L+  S  ++++  S Y   A  Y       L+ 
Sbjct: 165 RNYQRALELFSSFLKKFPRSGYAADASLYRADCYLHLSG 203


>gi|118594321|ref|ZP_01551668.1| TPR repeat [Methylophilales bacterium HTCC2181]
 gi|118440099|gb|EAV46726.1| TPR repeat [Methylophilales bacterium HTCC2181]
          Length = 611

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 30/231 (12%), Positives = 74/231 (32%), Gaps = 46/231 (19%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQC-----SRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
             ++     F++  + ++A  Y  +      +           +L+           ++ 
Sbjct: 37  ETLFLIGTCFIQLNDTTQAILYLKKALNQRKNDRH--------TLMNLGAAYRKMKDFKS 88

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A    +E +   P   +   V   +G +Y         DQ      ++  S+ +    ++
Sbjct: 89  ATQYLKECLKTNPRDPD---VLNNLGATYE--------DQGLHSQSIKAFSQALSHDPSN 137

Query: 173 PYVKGARFYVTVGRNQL-------------------AAKEVEIGRYYLKRGEYVAAIPRF 213
              K  R    +   +L                   A  E+      +K+  +  AI   
Sbjct: 138 ETFKINRARALIAYRKLTKALSDLKQISVQSPHYFQAQYEIF--NVLIKQNNFSEAIKLG 195

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
           + ++AN    +H      +L+E  + L+ +D+A   +  +    P   + +
Sbjct: 196 ESLIANSGQLDHI-RINKKLIECSMMLSQIDKANLYLKKLSLNDPDYKFYQ 245


>gi|312972198|ref|ZP_07786372.1| cellulose synthase operon protein C [Escherichia coli 1827-70]
 gi|310334575|gb|EFQ00780.1| cellulose synthase operon protein C [Escherichia coli 1827-70]
 gi|323934688|gb|EGB31078.1| cellulose synthase operon protein C [Escherichia coli E1520]
          Length = 1140

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 77/236 (32%), Gaps = 36/236 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 426 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 482

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 483 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 539

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197
             Q         +  +V R   S  V      +   G+   A             ++ + 
Sbjct: 540 RAQWN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 593

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 594 DWAQQRRDYTAARAAYQNVLTREP---ANADAILGLTEVDIAAGDKAAARSQLAKL 646



 Score = 35.9 bits (82), Expect = 6.8,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 339 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 395

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 396 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 441

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 442 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 490

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + ++ P      Y   L
Sbjct: 491 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 520


>gi|301168118|emb|CBW27704.1| hypothetical protein BMS_2934 [Bacteriovorax marinus SJ]
          Length = 900

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 27/91 (29%), Gaps = 7/91 (7%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
           L   A   +    Y +AA + +++I  Y            +   +    ++         
Sbjct: 437 LYNVAEAYFRNSNYSKAAKVYDDFIKDYSFHSKSSEARIRIAQCWEIQEKNFD------- 489

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
             ++     + R  NS     AR      RN
Sbjct: 490 ETIELYKNAINRSQNSEIGFEARIRYVALRN 520


>gi|299141251|ref|ZP_07034388.1| TPR domain-containing protein [Prevotella oris C735]
 gi|298577211|gb|EFI49080.1| TPR domain-containing protein [Prevotella oris C735]
          Length = 1007

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 40/115 (34%), Gaps = 19/115 (16%)

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQ----AASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
           F      SL  +++  ++ G+Y +    A    + +    P   N D   ++  +S    
Sbjct: 662 FGKHIEDSLYAASYTAFNEGRYNEVLGNAHVSAKRF----PNGANRDKFLFIAALSKLND 717

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
                      K  LQ ++ +V  Y  S     A   +   +   A K++   ++
Sbjct: 718 --------GDAKACLQDLNTLVSTYPESQLSVMAGMIINGVK---AGKQLRGAKF 761


>gi|260846319|ref|YP_003224097.1| cellulose synthase subunit [Escherichia coli O103:H2 str. 12009]
 gi|257761466|dbj|BAI32963.1| cellulose synthase subunit [Escherichia coli O103:H2 str. 12009]
          Length = 1140

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 77/236 (32%), Gaps = 36/236 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 426 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 482

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 483 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 539

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197
             Q         +  +V R   S  V      +   G+   A             ++ + 
Sbjct: 540 RAQWN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 593

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 594 DWAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 646



 Score = 35.9 bits (82), Expect = 6.8,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 339 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 395

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 396 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 441

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 442 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 490

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + ++ P      Y   L
Sbjct: 491 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 520


>gi|224085786|ref|XP_002307696.1| predicted protein [Populus trichocarpa]
 gi|222857145|gb|EEE94692.1| predicted protein [Populus trichocarpa]
          Length = 797

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 21/158 (13%), Positives = 51/158 (32%), Gaps = 17/158 (10%)

Query: 14  AWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF 73
            W Y L +  + +  ++    +V    +  R+  +   T  R  + +            +
Sbjct: 300 QWGYLLPQIYVNLGIALEGEGMVLSACEYYREAAILCPTHFRALKLL---GSALFGVGEY 356

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
             A +        F     A  +    A   ++ G+ ++A  + ++ I   P   +    
Sbjct: 357 KAAVKALE--EAIFMKPDYA-DAHCDLASALHAMGEDEKAIEVFQKAIDLKPGHVD---A 410

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            Y +G  Y         D    +   +  +R++  + N
Sbjct: 411 LYNLGGLYM--------DLGRFQRASEMYTRVLAVWPN 440


>gi|148262768|ref|YP_001229474.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4]
 gi|146396268|gb|ABQ24901.1| Tetratricopeptide TPR_2 repeat protein [Geobacter uraniireducens
           Rf4]
          Length = 632

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 68/202 (33%), Gaps = 19/202 (9%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           +   F+K + + KA   +    +D P       +L      Q +AG   +A +   E I 
Sbjct: 276 QGDEFVKNKEYEKAATEYKAALKDKP--EWPE-ALQKLGDAQMAAGHDDEAIASYREAIR 332

Query: 123 QYPESKNVDY---VYYLV------GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
              E+ N+ Y   + Y         +   +   +   D   T+  L  +  +   +    
Sbjct: 333 LKAENGNLHYNLGILYERKALLDEAVVEYRQALNYTADNGDTRRRLADIYTLRGSFPQ-- 390

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
                   +   R        ++ + Y+   +Y AAI  +        D   A   +A L
Sbjct: 391 -AIEQYRELIKLRKDNPLIHFKLAKVYVNSKDYPAAISEYLETTKLDPDNIEAHRDLAAL 449

Query: 234 VEAYVALALMDEA-REVVSLIQ 254
              +      +EA +E  S+++
Sbjct: 450 ---FRKKNQNEEAEKEYRSILR 468



 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 69/197 (35%), Gaps = 14/197 (7%)

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE--- 126
             +F +A E + +  +               A V  ++  Y  A S   E     P+   
Sbjct: 385 RGSFPQAIEQYRELIKL---RKDNPLIHFKLAKVYVNSKDYPAAISEYLETTKLDPDNIE 441

Query: 127 -SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
             +++    +       +  ++     R  K  ++  + +   Y  +         +  G
Sbjct: 442 AHRDLA-ALFRKKNQNEEAEKEYRSILRMKKDDVEARTALTSIYVKNKNYDELINLLKEG 500

Query: 186 RNQLAA---KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
                       ++G  Y  + +Y AAI +++  +A  SD     +A+  +  AY+    
Sbjct: 501 VELNPKDPNSHYKLGLIYEFKKDYDAAISQYKESVALKSD---HAKALNAMGRAYMKSGR 557

Query: 243 MDEAREVVSLIQERYPQ 259
           + EA+E +   ++  P+
Sbjct: 558 ISEAKEALETAKKADPE 574


>gi|220927469|ref|YP_002504378.1| hypothetical protein Ccel_0010 [Clostridium cellulolyticum H10]
 gi|219997797|gb|ACL74398.1| TPR repeat-containing protein [Clostridium cellulolyticum H10]
          Length = 253

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/140 (12%), Positives = 38/140 (27%), Gaps = 26/140 (18%)

Query: 63  KAVLFLKEQNFSKAYEYFN---QCSRDFP-------------FAGVARKSLLMSAFVQYS 106
            A+ +   +++  A        +     P             +   + KS     +  Y 
Sbjct: 122 AAMEYYNNKDYVNAAVTLKYDVKIEYLSPKVINTYNDLVEKSYGKASLKSYRD-GYRDYK 180

Query: 107 AGKYQQAASLGEEYITQYPESKN-VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
              Y  A       I    +++  +D  YY +  SY +            K ++      
Sbjct: 181 NKNYAGAIINLNRAIDFSKKNEYYIDDAYYYLANSYYKSSNFTD-----AKRIINAFQT- 234

Query: 166 VERYTNSPYVKGARFYVTVG 185
              Y  S + +  R  +   
Sbjct: 235 --DYPKSEFARSMRNLLEKI 252


>gi|75909502|ref|YP_323798.1| hypothetical protein Ava_3295 [Anabaena variabilis ATCC 29413]
 gi|75703227|gb|ABA22903.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
          Length = 311

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 45/154 (29%), Gaps = 20/154 (12%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE------VYEKAVLFLKEQNFSKAYEYFN 81
           F++A   L G   + +     +       + E       Y   ++  ++QN+  A   F 
Sbjct: 112 FALAFANLGGSLLEGNNLQQANDYLQRALELEPRLGFAHYNLGLVRQQQQNWEGAIASFQ 171

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
           +       +  A +            GK  +A +   + I   P        +Y +G+  
Sbjct: 172 KAVEL---SKNAPEPHYYLGLCYLQLGKLDEAKNAFNQAIKINPRYSE---AHYNLGVIL 225

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
                     Q  ++  L       E   N P  
Sbjct: 226 FN--------QGNSQEALIAFRNSAEANPNYPNA 251



 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 31/241 (12%), Positives = 63/241 (26%), Gaps = 43/241 (17%)

Query: 13  EAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN 72
               Y+    AL     +  C         +    L   + +     +  + +  ++   
Sbjct: 2   RLPFYKYRIVALLSLILLGECLTPANATIPAIPKLLAQYS-LPTAPTLLNQGLQAIQAGR 60

Query: 73  FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG----KYQQAASLGEEYITQYPESK 128
              A   F    +  P            A   Y+ G    +  Q     + +        
Sbjct: 61  IQDAIAAFQSAIQLDP----------NLAAAHYNLGLALRQTGQLQPAADAFYRATQSDP 110

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           N               +     +    +    Y+ R +E                  R  
Sbjct: 111 NFALA--------FANLGGSLLEGNNLQQANDYLQRALELEP---------------RLG 147

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
            A   + + R   ++  +  AI  FQ  +     +++A E    L   Y+ L  +DEA+ 
Sbjct: 148 FAHYNLGLVR--QQQQNWEGAIASFQKAVEL---SKNAPEPHYYLGLCYLQLGKLDEAKN 202

Query: 249 V 249
            
Sbjct: 203 A 203


>gi|116749962|ref|YP_846649.1| TPR repeat-containing serine/threonin protein kinase
           [Syntrophobacter fumaroxidans MPOB]
 gi|116699026|gb|ABK18214.1| serine/threonine protein kinase with TPR repeats [Syntrophobacter
           fumaroxidans MPOB]
          Length = 747

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 27/88 (30%), Gaps = 9/88 (10%)

Query: 47  YLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAF 102
           Y D+V       E Y +   L   + +++ A   +          P   +A       AF
Sbjct: 537 YRDAVRVNGNAPEAYSEMGALQQAQGDYASAIRSYEAGLALRPSHPDELLA-----NVAF 591

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNV 130
                    QA    E+ +   P ++  
Sbjct: 592 CHDKLNNPDQARRYYEQALEINPNNRAA 619


>gi|320109033|ref|YP_004184623.1| tetratricopeptide repeat-containing protein [Terriglobus saanensis
           SP1PR4]
 gi|319927554|gb|ADV84629.1| Tetratricopeptide TPR_1 repeat-containing protein [Terriglobus
           saanensis SP1PR4]
          Length = 330

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 41/126 (32%), Gaps = 24/126 (19%)

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK-------YQQAASLGEEYITQYPESKNV 130
             F +  + +     A +     A   +  G          +A    +  I   P  +  
Sbjct: 213 REFEEAEQRY---RYATEVDPFYALAFFDLGNVLDELQRLPEAIVAYQRAIALVP--EYA 267

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
           D  +Y + ++Y +        Q   +  L+Y    V      P+   AR   T  R  LA
Sbjct: 268 D-AHYNLALAYER--------QGQRRKALKYWQAYVRLDPVGPWATHAR---TQARRILA 315

Query: 191 AKEVEI 196
            +++ I
Sbjct: 316 TEKLSI 321


>gi|296413480|ref|XP_002836440.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295630261|emb|CAZ80631.1| unnamed protein product [Tuber melanosporum]
          Length = 763

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 3/71 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +  +A  +L+     KA    ++      +  + +K+L  SA   Y  G Y+ A S   +
Sbjct: 249 LLNRAQAYLELGYNEKALIDADKVLS---YEPLNQKALYRSALACYKDGDYESAKSRLVK 305

Query: 120 YITQYPESKNV 130
            + ++PE+KN 
Sbjct: 306 LLKKFPENKNA 316


>gi|229148579|ref|ZP_04276833.1| hypothetical protein bcere0011_1550 [Bacillus cereus m1550]
 gi|228634837|gb|EEK91412.1| hypothetical protein bcere0011_1550 [Bacillus cereus m1550]
          Length = 254

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 23/58 (39%), Gaps = 5/58 (8%)

Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-----YEKAVLFLKEQ 71
          + KF L     +AV   VG   + ++         V+ ++E+     + KA    K +
Sbjct: 1  MKKFILISSLVLAVGLGVGCSNEKTKKTDEPKKEAVQKEKELTAKDVFNKANEAFKNE 58


>gi|149187171|ref|ZP_01865469.1| hypothetical protein VSAK1_16647 [Vibrio shilonii AK1]
 gi|148838707|gb|EDL55646.1| hypothetical protein VSAK1_16647 [Vibrio shilonii AK1]
          Length = 629

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 55/165 (33%), Gaps = 38/165 (23%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            +F S  +  L G+   S+    +DS  +   Q ++        +++++  A   F+   
Sbjct: 319 VVFCSPLLAILFGFNSNSAEASIIDSAFNN--QNQL---GYHAFQDKDYESAKNLFSN-- 371

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
                           A  QY  G YQQA    +          ++    Y +G +YAQ 
Sbjct: 372 -----KQW-------LAAAQYENGDYQQAIDNLQ-------GESDIS-ALYNLGNAYAQ- 410

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
                              +++ +  N      A+F + + ++ +
Sbjct: 411 -------HGELVKAADMYQQVLNQQPNH---ADAKFNLNLVKDAM 445


>gi|126739137|ref|ZP_01754831.1| TPR domain protein [Roseobacter sp. SK209-2-6]
 gi|126719754|gb|EBA16462.1| TPR domain protein [Roseobacter sp. SK209-2-6]
          Length = 217

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 7/73 (9%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAA 114
            +E+ ++ +      ++  A E F+Q     P +A    +++     FV +    + QA 
Sbjct: 89  AQEILDRGMNRRASYDYLGALEDFDQLISYCPNYAEGYNQRA-----FVHFLQRDFAQAL 143

Query: 115 SLGEEYITQYPES 127
           +  E+ I   P  
Sbjct: 144 ADLEQAIELSPRH 156


>gi|158522428|ref|YP_001530298.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
 gi|158511254|gb|ABW68221.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
           Hxd3]
          Length = 762

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 64/221 (28%), Gaps = 42/221 (19%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y   + F   ++ ++A   F Q  R  P ++    K+      +    G ++ A +  + 
Sbjct: 499 YNLGLAFFDLKDMAQARTAFEQTLRVNPLYS----KAHNNLGVILMQEGDHEAAVAAYQR 554

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +            Y  +G+   Q        Q        +  + +       Y   A 
Sbjct: 555 ALK---TDPRFAQAYNNLGIIAYQ--------QGNPDQAASFFKKALTADP--AYAGAAN 601

Query: 180 FYVTVGRNQLAAK-----EVE---------------IGRYYLKRGEYVAAIPRFQLVLAN 219
             +   R  +        E++               + + Y   G    AI ++Q  LA 
Sbjct: 602 N-LARVRQTIEKHGPAITELKQMLHKTPNDVDLSCRLAQVYQAAGMRYGAISQYQKALAL 660

Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
                 +  A+  L   Y A+    +A E    +    P  
Sbjct: 661 QPGHGPSLNALGVL---YAAMGQPAKAVECFRKLSALMPGN 698


>gi|118380177|ref|XP_001023253.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89305020|gb|EAS03008.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 964

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 47/156 (30%), Gaps = 38/156 (24%)

Query: 62  EKAVLFLKEQNFSKAYEYF-------NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           +K    + ++++ +A E +                     ++L           KY +A 
Sbjct: 210 QKGNDAMAKEDYKQAVEMYSLGLDSMKDIKAL-----WTNRAL-----AYIKLKKYSKAI 259

Query: 115 SLGEE-------YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
                       +   Y +S++  +  +L   SYA+  +      +  K  L  +   ++
Sbjct: 260 EDCTRILDYCECFEEGYTKSRDSAFKAFLR-RSYARKEK------KDYKQALDDILEALK 312

Query: 168 RYTNSPYVKGARFYVTVGRNQ-------LAAKEVEI 196
            Y N       +  +   +         L   E E+
Sbjct: 313 LYPNDKAALDLKTELEFIQKHKEQASKLLPKHEFEV 348


>gi|119358229|ref|YP_912873.1| hypothetical protein Cpha266_2461 [Chlorobium phaeobacteroides DSM
           266]
 gi|119355578|gb|ABL66449.1| conserved hypothetical protein [Chlorobium phaeobacteroides DSM
           266]
          Length = 222

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 50/121 (41%), Gaps = 5/121 (4%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S+T    +  + +K  L   E+ ++KA   F   +  FP     RK+    A   +   +
Sbjct: 16  SMTARFDEYRLMQKGNLLYTEKAYAKAETVFRDLADKFPSGYETRKARYNLAHALFMQQR 75

Query: 110 YQQAASLGEEYITQYPE-SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +++A  + +E     P  S+ +    Y  G S AQ      +D    +   + +S  +ER
Sbjct: 76  FKEAGQVYKEVSKTVPTESQLLRAAQYNEGNSLAQQ----AFDTTQKEEKKRLLSLAIER 131

Query: 169 Y 169
           Y
Sbjct: 132 Y 132


>gi|320104419|ref|YP_004180010.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Isosphaera pallida ATCC 43644]
 gi|319751701|gb|ADV63461.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Isosphaera pallida ATCC 43644]
          Length = 688

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 39/120 (32%), Gaps = 22/120 (18%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           Q           + + RY       GA   + + +  LA  E            +VAA  
Sbjct: 432 QGGPIASYAAFRKALARYALDSEEPGANL-LDIQKRLLADLE-----------AFVAA-- 477

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
                   Y  +  A EA+ +L       A   +A+     + +R+P+    R  +  +K
Sbjct: 478 --------YPQSAEAPEALLQLANVNEFNADEAKAKSYYQTLAKRFPESGPGRKAQGALK 529


>gi|242019950|ref|XP_002430421.1| ran-binding protein, putative [Pediculus humanus corporis]
 gi|212515551|gb|EEB17683.1| ran-binding protein, putative [Pediculus humanus corporis]
          Length = 2188

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 15/80 (18%)

Query: 186 RNQLAAKE-----VEIGRYYLKRGEYVAA---IPRFQLVLANYSDAEHAEEAMARLVEAY 237
           RN  +  E      +I + Y K  +Y +A   I R+ LV      + ++  A   L + Y
Sbjct: 17  RNLKSENERNLKCYQIAKLYYKVKDYNSAIKYINRYILV------SSNSAAAFRLLGDCY 70

Query: 238 VALALMDEA-REVVSLIQER 256
            AL L D+A     + ++  
Sbjct: 71  FALNLKDKAFNSYKNSLELN 90


>gi|254415985|ref|ZP_05029741.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
 gi|196177160|gb|EDX72168.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
          Length = 1039

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/132 (9%), Positives = 36/132 (27%), Gaps = 15/132 (11%)

Query: 1   MSAVLGRAICIFEAWAYQLYKFALTIFFSIAV----CFLVGWERQSSRDVYLDSVT---- 52
           M   L +      + A+ +  F LT+  S+ V      + G                   
Sbjct: 4   MPVFLTQRQKWLTSLAWGISAFLLTLVLSLGVFPTMAQMSGTMESGQPSGIEPLPELMSL 63

Query: 53  ----DVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLL--MSAFVQY 105
                     ++ ++     ++  ++ A  ++               ++++    A    
Sbjct: 64  KRQLQTMSTAQLVQQGNQSYQQGQYTDAITFWQQALETFASPGNQLNQAMILSNLALAYQ 123

Query: 106 SAGKYQQAASLG 117
             G + +A    
Sbjct: 124 KLGNWSEAQDAI 135


>gi|254416973|ref|ZP_05030720.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
 gi|196176140|gb|EDX71157.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
          Length = 746

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/164 (12%), Positives = 47/164 (28%), Gaps = 28/164 (17%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQ----------REVYEKAVLFL 68
           + K  + I  ++A     G    + +        D               +++++     
Sbjct: 1   MSKIPVQIGVALATLMTGGIASATVQTPIEPMKFDRTPTTMPIAQAQLLDQLWQQVSQLR 60

Query: 69  KEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
               + +A     +  +  P  F     +      F  +  G+Y+ A +  +E +   P 
Sbjct: 61  GVGKYREAIAILERIVQIQPEAFLAWYWRGE---IFSSW--GQYESAIASYDEALRLQPS 115

Query: 127 SKNVDY--VYYLVGMSYAQMIRD----VPYDQRATKLMLQYMSR 164
                Y    Y  G +  ++ R       + Q  T        +
Sbjct: 116 -----YLLAQYKKGQALYELQRYQAAVTTWQQTLTLNAESEYEQ 154


>gi|193084158|gb|ACF09823.1| TPR-repeat protein [uncultured marine crenarchaeote AD1000-207-H3]
          Length = 272

 Score = 38.2 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 51/139 (36%), Gaps = 17/139 (12%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            ++  +A+ F++++    A   F +  +  P       ++           KYQ A +  
Sbjct: 11  EDLLHQAMSFMEKRQPKSAIPLFKKIVKQDP---KNTDAMYNQGLALNQLRKYQDAITCF 67

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           ++ +   P  K V       G++ A++          T    +Y  + +E   +S Y   
Sbjct: 68  DKTLEINP--KYVA-AINNKGIALAEL--------GNTDDAFEYYDKAIEI--DSKYAA- 113

Query: 178 ARFYVTVGRNQLAAKEVEI 196
           A +   V  ++L   +  I
Sbjct: 114 AHYNKGVLYDKLLQHDEAI 132


>gi|329906688|ref|ZP_08274484.1| Heat shock protein [Oxalobacteraceae bacterium IMCC9480]
 gi|327547183|gb|EGF32044.1| Heat shock protein [Oxalobacteraceae bacterium IMCC9480]
          Length = 391

 Score = 37.8 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 9/70 (12%)

Query: 52  TDVRYQREV---YEKAVLFLKEQNFSKAYEYFNQC-SRDFPFAGVARKSLLMSAFVQYSA 107
            D+  + +V   YE    +LK     +A E FN+     +  +  AR++LL         
Sbjct: 100 PDLPLEHQVHAQYELGQDYLKAGLLDRAEETFNRLVETQY--SAQARRALLEI---YQRE 154

Query: 108 GKYQQAASLG 117
            ++ +A    
Sbjct: 155 KEWTRAIDAA 164


>gi|320182592|gb|EFW57482.1| Cellulose synthase operon protein C [Shigella boydii ATCC 9905]
          Length = 1111

 Score = 37.8 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 77/236 (32%), Gaps = 36/236 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 397 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 453

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 454 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHNQDRAALAH---INSLP 510

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197
             Q         +  +V R   S  V      +   G+   A             ++ + 
Sbjct: 511 RAQWN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 564

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 565 DWAQQRRDYTAARTAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 617



 Score = 35.9 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 310 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 366

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 367 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 412

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 413 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 461

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + ++ P      Y   L
Sbjct: 462 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 491


>gi|255644906|gb|ACU22953.1| unknown [Glycine max]
          Length = 324

 Score = 37.8 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/141 (12%), Positives = 39/141 (27%), Gaps = 18/141 (12%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYS 106
           ++      +  + ++   F K   + KA   + Q  +  P      + ++          
Sbjct: 3   ETKEGSGSEMSLKDQGNEFFKSGKYLKAAALYTQAIKLDPSNPTLYSNRAA-----ALLQ 57

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
             K  +A    E  I   P+ +     Y+  G S  + ++            L      +
Sbjct: 58  LDKLNKALDDAEMTIKLKPQWEKG---YFRKG-SILEAMKRYD-------DALASFQIAL 106

Query: 167 ERYTNSPYVKGARFYVTVGRN 187
           +    S  V      +     
Sbjct: 107 QYNPQSQEVSKKIKKINQLVK 127


>gi|228956613|ref|ZP_04118406.1| hypothetical protein bthur0005_1570 [Bacillus thuringiensis
          serovar pakistani str. T13001]
 gi|228803039|gb|EEM49864.1| hypothetical protein bthur0005_1570 [Bacillus thuringiensis
          serovar pakistani str. T13001]
          Length = 254

 Score = 37.8 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 23/58 (39%), Gaps = 5/58 (8%)

Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-----YEKAVLFLKEQ 71
          + KF L     +AV   VG   + ++         V+ ++E+     + KA    K +
Sbjct: 1  MKKFILISSLVLAVGLGVGCSNEKTKKTDEPKKEAVQKEKELTAKDVFNKANEAFKNE 58


>gi|298529131|ref|ZP_07016534.1| protein of unknown function DUF181 [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298510567|gb|EFI34470.1| protein of unknown function DUF181 [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 575

 Score = 37.8 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 38/99 (38%), Gaps = 6/99 (6%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           + +  L+++   +A +YF +     P +     S   SA+      ++ +        I 
Sbjct: 431 QGMNLLRQEEHQQAAKYFARAESLQPDSESRGLSAFYSAYALSGLHRWPETIEHLNRAIE 490

Query: 123 QYPESKNVDYVYY-LVGMSYAQMIRDVPYDQRATKLMLQ 160
             P  K     Y+ L G++Y +  +D  +     +  LQ
Sbjct: 491 LDPLVKE----YFNLRGVAYFKQ-KDYEHAIDDFQKALQ 524


>gi|294658330|ref|XP_002770760.1| DEHA2F07040p [Debaryomyces hansenii CBS767]
 gi|202953050|emb|CAR66287.1| DEHA2F07040p [Debaryomyces hansenii]
          Length = 655

 Score = 37.8 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 19/43 (44%)

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
           A  R  + L  Y    H  E M  L E Y ++ ++++A   V 
Sbjct: 89  AADRLTMALEKYPHVTHTGEVMQELGECYFSMGMVEQAHSAVQ 131


>gi|241206107|ref|YP_002977203.1| adenylate/guanylate cyclase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240859997|gb|ACS57664.1| adenylate/guanylate cyclase with TPR repeats [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 595

 Score = 37.8 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 4/60 (6%)

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           A   +S G+Y+QA +  E+ + Q  +S+   Y   L+   Y  + R     ++A +  L+
Sbjct: 498 ADAHFSLGEYEQAIAAIEQRLQQNSQSE-TAYA--LLASCYGHLDR-PEESRQAWEKALR 553


>gi|166363119|ref|YP_001655392.1| TPR repeat-containing protein [Microcystis aeruginosa NIES-843]
 gi|166085492|dbj|BAG00200.1| tetratricopeptide repeat protein [Microcystis aeruginosa NIES-843]
          Length = 1379

 Score = 37.8 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 26/177 (14%), Positives = 53/177 (29%), Gaps = 42/177 (23%)

Query: 60   VYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARK-----------------SLLMS 100
             Y +    L   +++KA E  ++ +  +         +                 S L  
Sbjct: 1118 YYNQQKYELALADWNKAIELDSKLAMAYSNRGNIYNDQQKYELALADFNKAIELDSKLAM 1177

Query: 101  AFV-----QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
            A+       Y   KY+ A +   + +   P   N+   Y   G  Y    +D        
Sbjct: 1178 AYSNRGNLYYLQQKYELALADYNKALDINP---NLAEAYLGRGGIYYYQQKD-------- 1226

Query: 156  KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY----LKRGEYVA 208
            +L L   ++ +E   N       R  +   +      E+ +  Y     + +  + A
Sbjct: 1227 ELALADFNKAIEINPNLVEAYNNRGNLYYLQQ---KYELALSDYNKAIKINKNAWFA 1280


>gi|119511358|ref|ZP_01630471.1| TPR repeat protein [Nodularia spumigena CCY9414]
 gi|119463980|gb|EAW44904.1| TPR repeat protein [Nodularia spumigena CCY9414]
          Length = 250

 Score = 37.8 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 47/139 (33%), Gaps = 20/139 (14%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVY--------------LDSVTDVRYQREVY 61
            Y +  +   I  S+   F+VG    +                   L      +  ++++
Sbjct: 1   MYSMVFWRCLIASSVMSLFMVGCGDGTGTSTKYATQVVQEINVAQLLTEAEASQKAQKLF 60

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++A   L  Q++  A + +++     P         +       S  +Y +A +  E+ I
Sbjct: 61  DQANGLLDTQDYQDAVQVYDKAIAVQPKNPDT---WINRGNALTSLQQYSEALASYEQAI 117

Query: 122 TQYPESKNVDYVYYLVGMS 140
              P   N D  +Y  G +
Sbjct: 118 ALQP---NKDEAWYNRGNA 133


>gi|77748781|ref|NP_644665.2| polysaccharide deacetylase [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 900

 Score = 37.8 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 36/127 (28%), Gaps = 20/127 (15%)

Query: 62  EKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           E+ +   KE+ +  A E F             A  +     FV Y  G++ ++A   E  
Sbjct: 791 ERGLQLYKEKRYVDAAEQFAEALKLR---PDFA-LAANNLGFVYYRQGRFAESARWLENT 846

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPY--DQRATKLMLQYMSRIVERYTNSPYVKGA 178
           +   P             ++Y  +        D+   +        +          + A
Sbjct: 847 LKIDPS----------RAVAYLNLGDAYAKAGDRDKARKAYSTYLELQ---PQGSGAEQA 893

Query: 179 RFYVTVG 185
           R  +   
Sbjct: 894 RTQLQSL 900


>gi|27377562|ref|NP_769091.1| hypothetical protein blr2451 [Bradyrhizobium japonicum USDA 110]
 gi|27350706|dbj|BAC47716.1| blr2451 [Bradyrhizobium japonicum USDA 110]
          Length = 232

 Score = 37.8 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 56/177 (31%), Gaps = 28/177 (15%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV----YE-KAVLFLKEQNFSKA 76
             L +   ++   +V    +   D+    +     +  +    YE +  + L+  ++ +A
Sbjct: 29  IVLGVLIGLSTHMVVNCGDEDEPDICAAVIGFSPLRGSLIAFAYEGRGRIALRHGDWRRA 88

Query: 77  YEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
              F++     P      ++ L    A  +   G  + A +  +E I        +   Y
Sbjct: 89  IADFDEAIHLNP-----NRASLYRDRAEARRQNGDLELAIADYDEAIA---HDPKLAAPY 140

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
           +  G++ A    D+          +   +  V           A+  +  G   LA 
Sbjct: 141 HQRGLALA-ATGDLDR-------AILSYNTAVRLAP-----SDAQARLDRGLAFLAR 184


>gi|328869262|gb|EGG17640.1| hypothetical protein DFA_08636 [Dictyostelium fasciculatum]
          Length = 921

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/74 (13%), Positives = 25/74 (33%), Gaps = 7/74 (9%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGK 109
              +   E+ ++      E+++  A +++ +     P       + +    A   Y  G 
Sbjct: 4   PATKRSDELRQQGNRKYTEKDYKAAIKFYEEARTLTP-----ADAAIPSNLAASFYELGM 58

Query: 110 YQQAASLGEEYITQ 123
           Y +A    +  I  
Sbjct: 59  YDKALLYSQRTIDL 72


>gi|327405135|ref|YP_004345973.1| hypothetical protein Fluta_3161 [Fluviicola taffensis DSM 16823]
 gi|327320643|gb|AEA45135.1| hypothetical protein Fluta_3161 [Fluviicola taffensis DSM 16823]
          Length = 703

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 24/190 (12%), Positives = 52/190 (27%), Gaps = 54/190 (28%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRD-----------------------FPFAGVARKSLL 98
           E+A    +++N   A E F                             +P +   +++L 
Sbjct: 129 EEAYDSYQKKN-DWADEKFKAIYSRDSIGYQKAKTANSSAGFDLFLKKYPESTFQKEALN 187

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
               +QY      +  S    +  Q+P +  V               +D  Y        
Sbjct: 188 NYYRLQYIENTDGKTVSSYLGFEKQFPSNPYVADA------------QDQVYHMSTKGSR 235

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
           +Q     ++ Y  +  V+ A   +          ++ +  Y         ++ R      
Sbjct: 236 VQDFKVFIKTYPKNRNVENAWRKL---------YQLYMSDY---------SLERLDKFQK 277

Query: 219 NYSDAEHAEE 228
            + D  +  E
Sbjct: 278 EFPDYPYTSE 287


>gi|322500663|emb|CBZ35740.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 693

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 6/70 (8%)

Query: 67  FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
           ++++  + +A E       +FP +  A    LM A+  Y  G Y +AASL E+     P 
Sbjct: 61  YIRDHQYEEAVELLATQLEEFPRSRAA--VSLM-AYCYYMMGDYGEAASLYEQLTKICPN 117

Query: 127 SKNVDY-VYY 135
            +   Y VYY
Sbjct: 118 IEE--YRVYY 125


>gi|292654290|ref|YP_003534187.1| tetratricopeptide repeat-containing protein [Haloferax volcanii
           DS2]
 gi|291371884|gb|ADE04111.1| tetratricopeptide repeat protein [Haloferax volcanii DS2]
          Length = 246

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/114 (11%), Positives = 34/114 (29%), Gaps = 10/114 (8%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            K     + + + +A   + +  +    +  A  +    A+  + AG+   A    E  +
Sbjct: 105 NKGAAHGQLEEWDEAIGSYREALKLDDDSEHAATAHTNLAYALWEAGQTADALDHAERAV 164

Query: 122 TQYPESKNVDY----VYYLVGM------SYAQMIRDVPYDQRATKLMLQYMSRI 165
              P      Y      +  G+      ++   IR         +   + +  +
Sbjct: 165 ELDPRFPQAWYNRGFFLHERGLNEDAVNAFDNAIRLGMRTPGVHEEKARALEEL 218


>gi|291227751|ref|XP_002733846.1| PREDICTED: SH2 domain binding protein 1-like, partial [Saccoglossus
           kowalevskii]
          Length = 1197

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 54/141 (38%), Gaps = 24/141 (17%)

Query: 133 VYYLVGM------SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG------ARF 180
            Y L+ +      +  Q  RD   ++R     L    +++     + Y         A+ 
Sbjct: 553 AYSLLALGNVWLQTLYQPTRDKDKEKRHQDRALAMYKQVLRNDGKNIYAANGIGAVLAQK 612

Query: 181 -YVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
            Y+   R+  +  +E         + +   Y+++ +Y++AI  ++  L  +    H  E 
Sbjct: 613 GYIREARDVFSQVREATADMRDVWLNLAHIYVEQKQYISAIQMYENCLRKFYKY-HNTEV 671

Query: 230 MARLVEAYVALALMDEAREVV 250
           M  L  AY     M + ++V+
Sbjct: 672 MLYLARAYFRAGKMMDCKKVL 692


>gi|281347470|gb|EFB23054.1| hypothetical protein PANDA_015372 [Ailuropoda melanoleuca]
          Length = 616

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/210 (12%), Positives = 61/210 (29%), Gaps = 31/210 (14%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAY 77
           + K  + +            +        LD +T  R +  +Y   A   +K +   +A 
Sbjct: 17  MNKGLIELSPIQQALIYSFCKNHDKAIQVLDGITVNRPELTMYTLLAKAQMKAKRNKEAV 76

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAG----KYQQAASLGEEYITQYPESKNVDYV 133
             F +    F  +     ++  SA   Y+ G    +        + +      +      
Sbjct: 77  RMFKKALDIFSHSDKGPNAIQASADCLYNLGLCYMEEGNVQMAFDCFTKAVKANPEFAEG 136

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
           +Y  G+   ++ +D           +   +R +              +     +++A   
Sbjct: 137 FYQRGLCKVKLHKDS---------SVLDFNRAITLNP---------KHYQAYLSRVA--- 175

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
                +Y  +G Y  AI      +  Y  +
Sbjct: 176 -----FYGLKGRYSKAILNCNEAIKIYPQS 200


>gi|239828288|ref|YP_002950912.1| hypothetical protein GWCH70_2973 [Geobacillus sp. WCH70]
 gi|239808581|gb|ACS25646.1| Tetratricopeptide TPR_2 repeat protein [Geobacillus sp. WCH70]
          Length = 493

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 29/71 (40%), Gaps = 7/71 (9%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           E+A   L+++ F +A         ++P  ++          A   +  G  Q+A  + E+
Sbjct: 156 ERARFLLEKEKFPEAIRLLETIIANYPEFWSAYN-----NLALAYFYNGNVQKAQEIVEQ 210

Query: 120 YITQYPESKNV 130
            + + P + + 
Sbjct: 211 VLERNPGNLHA 221


>gi|225462328|ref|XP_002265699.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 1110

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 7/68 (10%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK--SLLMSAFVQYSAGKYQQAASLGE 118
           + +A L+++   + KA E + Q S+ FP    A K  + L         G+ +++ S+ E
Sbjct: 239 FHRASLYVELGEYQKAAESYEQISQLFPENVEAPKTGAKL-----YKKCGQVERSVSILE 293

Query: 119 EYITQYPE 126
           +YI  +P 
Sbjct: 294 DYIKDHPT 301


>gi|220909583|ref|YP_002484894.1| lytic transglycosylase catalytic subunit [Cyanothece sp. PCC 7425]
 gi|219866194|gb|ACL46533.1| Lytic transglycosylase catalytic [Cyanothece sp. PCC 7425]
          Length = 735

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 33/81 (40%), Gaps = 2/81 (2%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y   V  L++++   A E+     +D+P   +A   L   A      G+  QA +  +  
Sbjct: 88  YLLGVDALEQRDGRAALEFLANLEQDYPL--LAAPILTKRAEAFQLTGQTAQATATWKML 145

Query: 121 ITQYPESKNVDYVYYLVGMSY 141
           + Q+P+        Y +G + 
Sbjct: 146 LQQFPQQPEAAQALYGLGQTN 166


>gi|119483782|ref|XP_001261794.1| tetratricopeptide repeat domain protein [Neosartorya fischeri NRRL
           181]
 gi|119409950|gb|EAW19897.1| tetratricopeptide repeat domain protein [Neosartorya fischeri NRRL
           181]
          Length = 1250

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 35/99 (35%), Gaps = 25/99 (25%)

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
           R+V+   +SPY               A  E+  G +Y  +G+   A   F   +A Y   
Sbjct: 741 RLVDHQPDSPYGPAVLK---------ALNEL--GLFYWNQGKPSQAASMFHAAVAGY--- 786

Query: 224 EHAEEA-----------MARLVEAYVALALMDEAREVVS 251
           EH E +           + RL  AY  L+   +A     
Sbjct: 787 EHLERSDKLNDPSFLLTLHRLGIAYQKLSRFHDAERAFQ 825


>gi|121702613|ref|XP_001269571.1| DnaJ and TPR domain protein [Aspergillus clavatus NRRL 1]
 gi|119397714|gb|EAW08145.1| DnaJ and TPR domain protein [Aspergillus clavatus NRRL 1]
          Length = 540

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 28/70 (40%), Gaps = 3/70 (4%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
               F K+ N+++A E F +     P + V    L   A    SA +Y +A    E  + 
Sbjct: 54  AGNKFFKDGNYNRAIEEFTKAIEINPSSSV---YLSNRAAAYLSANRYLEALEDAERALE 110

Query: 123 QYPESKNVDY 132
             P +  + Y
Sbjct: 111 LDPTNSKIMY 120


>gi|118379651|ref|XP_001022991.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89304758|gb|EAS02746.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 1444

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 42/110 (38%), Gaps = 9/110 (8%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN-- 81
           L  F +I  C+L  ++   +        ++    +  Y +   F   + + +A    +  
Sbjct: 893 LFYFRAIVRCYLGYYQEGIADIDKAIEKSEDNVPKYFYLRGHTFGICKQYKQAISDLSIA 952

Query: 82  -QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
            Q   ++       +S L  A   + AG+   A +  ++YI+  P   N+
Sbjct: 953 IQLDENY------AESYLERAKCYHFAGESNNAFADLQKYISLKPTDPNI 996


>gi|148262188|ref|YP_001228894.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4]
 gi|146395688|gb|ABQ24321.1| Tetratricopeptide TPR_2 repeat protein [Geobacter uraniireducens
           Rf4]
          Length = 230

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/94 (15%), Positives = 33/94 (35%), Gaps = 7/94 (7%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF--PFAGVARKSLLMSAFVQYSAGKY 110
           D       Y    + L       A E      + +    + +A  +  +     ++   Y
Sbjct: 108 DSTNPEGYYGLGAILLGSGQTDAAIEKLALAEKIYRENGSSLAMDAQYLLGVAYFNKQDY 167

Query: 111 QQAASLGEEYITQ-YPESKNVDYVYYLVGMSYAQ 143
           +++     EY+   Y + ++   V YL+G+ Y  
Sbjct: 168 KRSR----EYLALSYAQKQDDPNVNYLLGLCYLD 197


>gi|332084569|gb|EGI89763.1| cellulose synthase operon protein C [Shigella boydii 5216-82]
          Length = 1157

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 77/236 (32%), Gaps = 36/236 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHNQDRAALAH---INSLP 556

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197
             Q         +  +V R   S  V      +   G+   A             ++ + 
Sbjct: 557 RAQWN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 611 DWAQQRRDYTAARTAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 663



 Score = 35.9 bits (82), Expect = 5.9,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + ++ P      Y   L
Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537


>gi|296481652|gb|DAA23767.1| dnaJ homolog subfamily C member 3 precursor [Bos taurus]
          Length = 504

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 39/114 (34%), Gaps = 4/114 (3%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKYQQAASL 116
            ++ E A   +KE  ++ A   +    +  P       +S            K  +A  +
Sbjct: 269 NKLIESAEELIKEGRYTDAISKYESVMKTEPGVHEYTIRSKERICHCFSKDEKPVEAIRV 328

Query: 117 GEEYITQYPESKNV--DYVY-YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
             E +   P++ N   D    YL+   Y + I+D    Q   +   Q    + +
Sbjct: 329 CSEVLQVEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQQIREGLEK 382


>gi|218201484|gb|EEC83911.1| hypothetical protein OsI_29964 [Oryza sativa Indica Group]
 gi|222640897|gb|EEE69029.1| hypothetical protein OsJ_28006 [Oryza sativa Japonica Group]
          Length = 583

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/151 (14%), Positives = 53/151 (35%), Gaps = 23/151 (15%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQ----CSRDFPFAG-VARKSL-------LMSAFVQYSAGK 109
           E+     K   + +A + + +       D  F+    ++S        L +A  +     
Sbjct: 411 EEGNALFKLGKYVRASKRYEKAAKFIEYDSSFSEDEKKQSKQLKVTCNLNNAACKLKLKD 470

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y+QA  L  + +    +S+NV    Y    +Y Q+           +L    + + +E  
Sbjct: 471 YKQAEKLCTKVLEL--DSQNVK-ALYRRAQAYMQLAD--------LELAEVDIKKALEID 519

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
            ++  V   +      + ++     +  ++Y
Sbjct: 520 PDNRQVLDVKLTYKNLKEKVKEYNKKDAKFY 550


>gi|194859710|ref|XP_001969435.1| GG23959 [Drosophila erecta]
 gi|190661302|gb|EDV58494.1| GG23959 [Drosophila erecta]
          Length = 1137

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 37/98 (37%), Gaps = 14/98 (14%)

Query: 109 KYQQAASLGEEYITQYPESKNVDYVY-YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           +Y +A S  ++Y+     +   ++ + Y +G++Y ++        R  K  ++    ++ 
Sbjct: 129 EYSEALSAYQKYLRFRENNYWTNHAFIYGIGVAYFKL--------RCFKWAIKSFQELLY 180

Query: 168 RYTNSPYVKGARFYVTVGRN-----QLAAKEVEIGRYY 200
              N          + +         +A K +++   Y
Sbjct: 181 LSPNFTCANEVHLRLGLMLKHCGEFHVAQKHLQLALLY 218


>gi|45358706|ref|NP_988263.1| hypothetical protein MMP1143 [Methanococcus maripaludis S2]
 gi|45047572|emb|CAF30699.1| TPR repeat [Methanococcus maripaludis S2]
          Length = 126

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 27/64 (42%), Gaps = 3/64 (4%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           +   E Y K +L   + N++++ + F +  +  P      K  LM     Y+  +Y++A 
Sbjct: 26  QNPEEYYSKGILQYDDGNYTESIDLFEKAIQLNPEES---KYWLMKGKALYNLERYEEAV 82

Query: 115 SLGE 118
               
Sbjct: 83  DCYN 86


>gi|27807457|ref|NP_777181.1| dnaJ homolog subfamily C member 3 precursor [Bos taurus]
 gi|73620802|sp|Q27968|DNJC3_BOVIN RecName: Full=DnaJ homolog subfamily C member 3; AltName:
           Full=Interferon-induced, double-stranded RNA-activated
           protein kinase inhibitor; AltName: Full=Protein kinase
           inhibitor of 58 kDa; Short=Protein kinase inhibitor p58;
           Flags: Precursor
 gi|468012|gb|AAA17795.1| PKR inhibitor P58 [Bos taurus]
          Length = 504

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 39/114 (34%), Gaps = 4/114 (3%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKYQQAASL 116
            ++ E A   +KE  ++ A   +    +  P       +S            K  +A  +
Sbjct: 269 NKLIESAEELIKEGRYTDAISKYESVMKTEPGVHEYTIRSKERICHCFSKDEKPVEAIRV 328

Query: 117 GEEYITQYPESKNV--DYVY-YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
             E +   P++ N   D    YL+   Y + I+D    Q   +   Q    + +
Sbjct: 329 CSEVLQVEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQQIREGLEK 382


>gi|71747364|ref|XP_822737.1| chaperone protein DnaJ [Trypanosoma brucei TREU927]
 gi|70832405|gb|EAN77909.1| TPR-repeat-containing chaperone protein DNAJ, putative [Trypanosoma
           brucei]
 gi|261332515|emb|CBH15510.1| TPR repeat protein [Trypanosoma brucei gambiense DAL972]
          Length = 499

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 54/193 (27%), Gaps = 27/193 (13%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
           A+  L            +  +     + +  +E     L+E+NF  A     + ++ FP 
Sbjct: 104 ALVVLEACGASPEDKKQIQELHRTAEEGQRGFEAGQRLLEERNFLAAERELVKAAQLFP- 162

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT----QYPESKNVDYVYYLVGMSYAQMI 145
                      A V    G+  QA+   E  I           +  Y  Y+  ++     
Sbjct: 163 ---------DCAIVGIMLGE-SQASLYPERVIRSLTALSSAHADDTYYLYVRALASYYS- 211

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
                 Q         +   +E   ++         +    +Q    E        K   
Sbjct: 212 -----GQSGLNNAQSILRHTIELDPDNRKATELLKKIRAVESQ--KTEGNAA---FKEKR 261

Query: 206 YVAAIPRFQLVLA 218
           + AA+  ++  + 
Sbjct: 262 FTAAVNCYKAAIE 274


>gi|323934090|gb|EGB30532.1| cellulose synthase operon protein C [Escherichia coli E1520]
          Length = 1109

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 77/236 (32%), Gaps = 36/236 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 395 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 451

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 452 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 508

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197
             Q         +  +V R   S  V      +   G+   A             ++ + 
Sbjct: 509 RAQWN-----NNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 562

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 563 DWAQQRRDYTAARAAYQNVLTREP---ANADAILGLTEVDIAAGDTAAARSQLAKL 615



 Score = 35.5 bits (81), Expect = 7.6,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 308 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 364

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 365 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 410

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 411 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 459

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + ++ P      Y   L
Sbjct: 460 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 489


>gi|302671233|ref|YP_003831193.1| hypothetical protein bpr_I1877 [Butyrivibrio proteoclasticus B316]
 gi|302395706|gb|ADL34611.1| hypothetical protein bpr_I1877 [Butyrivibrio proteoclasticus B316]
          Length = 595

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 40/117 (34%), Gaps = 25/117 (21%)

Query: 72  NFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           N ++  EYF Q  + +  +        L+ A   Y  G Y++     ++Y + +      
Sbjct: 236 NTTRRIEYFEQYQKTYQGYGKY----WLVLAESYYELGDYEKCIDAIDKYESMH------ 285

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
                         I     D    K +   +    E Y++S YV  A  Y+T   N
Sbjct: 286 --------------IDIFRKDHDYAKALAIALDAADEVYSSSEYVIHANHYLTEMLN 328


>gi|237709935|ref|ZP_04540416.1| BatE [Bacteroides sp. 9_1_42FAA]
 gi|229456028|gb|EEO61749.1| BatE [Bacteroides sp. 9_1_42FAA]
          Length = 272

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/115 (12%), Positives = 33/115 (28%), Gaps = 6/115 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY---EKAVLFLKEQNFSK 75
           + K    + F I+   +       S  V   +        + +    +A       +F+ 
Sbjct: 1   MTKIYFILIFLISFVTVYAQNESDSAQVAAQTEMPQNAAVQTFPTKTEADSAYIRNDFAA 60

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           + E +    R+    G +           Y      +A    E  +   P + ++
Sbjct: 61  SVEIYENILRN---EGESSDIYYNLGNSYYKMNNIAKAVLNYERALLLNPGNSDI 112


>gi|225166118|ref|ZP_03727847.1| hypothetical protein ObacDRAFT_5569 [Opitutaceae bacterium TAV2]
 gi|224799639|gb|EEG18139.1| hypothetical protein ObacDRAFT_5569 [Opitutaceae bacterium TAV2]
          Length = 463

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 29/75 (38%), Gaps = 7/75 (9%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           +  +++  D    +   E A   L +    +A +Y       +P    A  +    A + 
Sbjct: 302 EQVVEATPDDEAAKSALETAKTTLSQFRLKEAQDYCEH----YP-NDYA--ARFNLANLY 354

Query: 105 YSAGKYQQAASLGEE 119
           Y AG Y+ A +  ++
Sbjct: 355 YEAGDYEDAIANYQQ 369


>gi|149178854|ref|ZP_01857434.1| hypothetical protein PM8797T_17774 [Planctomyces maris DSM 8797]
 gi|148842329|gb|EDL56712.1| hypothetical protein PM8797T_17774 [Planctomyces maris DSM 8797]
          Length = 467

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 42/123 (34%), Gaps = 14/123 (11%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             +T        Y++ +++L      +A + F +  +  P    A  +LL        AG
Sbjct: 137 PELTPEEKANFHYQRGMIYLPLNKPQEAAQDFTETIKLSP-DHFA--ALLALPDAYALAG 193

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
             + A +   + I + P S     VY    M Y Q        Q   +  +   SR ++ 
Sbjct: 194 NNEMALASFNQVIQKQPNSPV---VYNNRAMFYQQ--------QGKLQEAINDFSRAIQI 242

Query: 169 YTN 171
              
Sbjct: 243 EPK 245


>gi|145488549|ref|XP_001430278.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124397375|emb|CAK62880.1| unnamed protein product [Paramecium tetraurelia]
          Length = 478

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/74 (16%), Positives = 27/74 (36%), Gaps = 11/74 (14%)

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
            A    + G Y++A     + +    +       YY  G+ ++        DQ+  +  +
Sbjct: 31  LANAYKNQGNYEEAIVDYSKALELNSKHAA---AYYNRGLIFS--------DQQIYEKAI 79

Query: 160 QYMSRIVERYTNSP 173
              S+ +E    +P
Sbjct: 80  MDYSKAIELLPANP 93


>gi|86131711|ref|ZP_01050308.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
 gi|85817533|gb|EAQ38707.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
          Length = 261

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 9/52 (17%), Positives = 19/52 (36%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           D    R +++  V  ++      A +Y  Q   ++  +  A +  L     Q
Sbjct: 207 DFTTPRFLFKAGVTAIELGKMDAAVKYLTQVKEEYATSDYAAQVDLYLGQAQ 258



 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 16/126 (12%), Positives = 42/126 (33%), Gaps = 18/126 (14%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG----VARKSLLMSAFVQYSAGKYQQAASL 116
           Y   + +L+ +++ KA  +         F+     +A  +           G+ ++A   
Sbjct: 143 YYAGMSYLEVKDYQKAISHLQD------FSSDDQMLAPLAKGAIGDAFMQLGQPEEALGY 196

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            E+               +  G++  ++              ++Y++++ E Y  S Y  
Sbjct: 197 YEKAAGLNANDFTTPRFLFKAGVTAIEL--------GKMDAAVKYLTQVKEEYATSDYAA 248

Query: 177 GARFYV 182
               Y+
Sbjct: 249 QVDLYL 254


>gi|294054025|ref|YP_003547683.1| hypothetical protein Caka_0488 [Coraliomargarita akajimensis DSM
           45221]
 gi|293613358|gb|ADE53513.1| hypothetical protein Caka_0488 [Coraliomargarita akajimensis DSM
           45221]
          Length = 368

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 3/76 (3%)

Query: 197 GRYYLKRGEYVAAIPRF--QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
           G YYLKR +   A+ R   + +           E M R  + Y  + + + A+ V   + 
Sbjct: 293 GTYYLKREQLKEAM-RAVSEGIAFARPTEAWTPELMFRSAQLYERIEMPEIAQSVYQELI 351

Query: 255 ERYPQGYWARYVETLV 270
             +P   WA   + ++
Sbjct: 352 LFFPASEWAEEAQAVI 367


>gi|237725398|ref|ZP_04555879.1| aerotolerance-related protein BatE [Bacteroides sp. D4]
 gi|265753587|ref|ZP_06088942.1| BatE protein [Bacteroides sp. 3_1_33FAA]
 gi|229436085|gb|EEO46162.1| aerotolerance-related protein BatE [Bacteroides dorei 5_1_36/D4]
 gi|263235301|gb|EEZ20825.1| BatE protein [Bacteroides sp. 3_1_33FAA]
          Length = 272

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/115 (12%), Positives = 33/115 (28%), Gaps = 6/115 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY---EKAVLFLKEQNFSK 75
           + K    + F I+   +       S  V   +        + +    +A       +F+ 
Sbjct: 1   MTKIYFILIFLISFVTVYAQNESDSAQVAAQTEMPQNAAVQTFPTKTEADSAYIRNDFAA 60

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           + E +    R+    G +           Y      +A    E  +   P + ++
Sbjct: 61  SVEIYENILRN---EGESSDIYYNLGNSYYKMNNIAKAVLNYERALLLNPGNSDI 112


>gi|291190510|ref|NP_001167125.1| RNA polymerase-associated protein CTR9 homolog [Salmo salar]
 gi|223648266|gb|ACN10891.1| RNA polymerase-associated protein CTR9 homolog [Salmo salar]
          Length = 1158

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 41/276 (14%), Positives = 99/276 (35%), Gaps = 39/276 (14%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
           A L RA    E   +     ++T  +++A  +    E   +  +Y + + +     + Y 
Sbjct: 476 ASLDRAKAEGEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYL 535

Query: 63  K-AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           +   +   + NF +A ++F +    ++D P    +    L  A       ++       E
Sbjct: 536 RLGAMARDKGNFYEASDWFKEALQINQDHP-DAWSLIGNLHLA-----KQEWGPGQKKFE 589

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ----RATKLMLQYMSRIVERYTNSPY 174
             + Q P ++N  Y    +G  + Q +     D+    R     L    +++   + + Y
Sbjct: 590 RILKQ-PSTQNDTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDSKNLY 648

Query: 175 VKGA-------RFYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVL 217
                      + Y    R+  A  +E         + +   Y+++ +Y++A+  ++  L
Sbjct: 649 AANGIGAVLAHKGYYREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCL 708

Query: 218 ANY---SDAEHAEEAMARLVEAYVALALMDEAREVV 250
             +    +     E +  L  A      + E ++ +
Sbjct: 709 KKFYKHQNT----EVLLYLARALFKCGKLQECKQTL 740


>gi|300940851|ref|ZP_07155381.1| tetratricopeptide repeat protein [Escherichia coli MS 21-1]
 gi|300454409|gb|EFK17902.1| tetratricopeptide repeat protein [Escherichia coli MS 21-1]
          Length = 944

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 77/236 (32%), Gaps = 36/236 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197
             Q         +  +V R   S  V      +   G+   A             ++ + 
Sbjct: 557 RAQWN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 611 DWAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 663



 Score = 35.5 bits (81), Expect = 7.5,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + ++ P      Y   L
Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537


>gi|254410549|ref|ZP_05024328.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
 gi|196182755|gb|EDX77740.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
          Length = 864

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 41/115 (35%), Gaps = 13/115 (11%)

Query: 27  FFSIAVCFLVGW---------ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           F  +++  LV           + + + ++    +     ++++  K +   +   FS+A 
Sbjct: 11  FIGLSLASLVFCISFHPWSTGQAEPATEIQQQQLLTPASEKQLVSKGIASYQIGEFSQAI 70

Query: 78  EYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
             + Q            ++++    A      G+  QA +  E+ I  Y  S + 
Sbjct: 71  NLWEQALPQ--ITDENDRAIVHNNLALAYRQTGELAQAIAHWEKAIQIYQASPDA 123



 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 68/227 (29%), Gaps = 34/227 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+A  +       +A        + +  +  +     +        +S G Y QA S  +
Sbjct: 135 EQAQAYNDLGQHPRAITLLESAIELATKYQDSLAEAAAQGALGNAHWSLGNYDQAISAHK 194

Query: 119 EYIT----QYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKLMLQY 161
           + +         +  +      VG  Y             A++  DV    R T+  LQ 
Sbjct: 195 QSLKIARALN-NNSFIATALNNVGNVYVSRASRSSYQAQVAELEGDVEQATRLTQEALQD 253

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQL-------AAKEVEIGRYYLK------RGEYVA 208
            ++    +  S     A   +T  +  +       +     +     +      R    +
Sbjct: 254 WTQARLFFEQSLETAQALGSLTEIKALMNLNRWLISRHSATVADNSAEPLSEGDRAFLQS 313

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
              R + +L    D+      +  L E++  +      +E + L+ +
Sbjct: 314 NWQRVRELLPGIPDSRQKAYTLIHLAESFQQIESEASIQESIQLLTQ 360


>gi|296134920|ref|YP_003642162.1| TPR repeat-containing protein [Thiomonas intermedia K12]
 gi|295795042|gb|ADG29832.1| TPR repeat-containing protein [Thiomonas intermedia K12]
          Length = 364

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 54/150 (36%), Gaps = 27/150 (18%)

Query: 42  SSRDVYLDSVTDVRYQREVYE--KAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSL 97
           SS    +D++   + +   Y+  K V+  +++  ++A + F   +  +P         ++
Sbjct: 37  SSALTQVDTLLAQKPKDPQYQFLKGVILTEQKKDAQAIKIFQSLTEQYPELPEPYNNLAV 96

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
           L   + Q   G+Y++A +  +  I   P         Y    +    I          KL
Sbjct: 97  L---YAQ--QGQYEKARAALDMAIRTNPS--------YATAQANLGDI--------YAKL 135

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
             Q   + ++   +      AR  + + R 
Sbjct: 136 ASQAYQKALQLAPD--ENASARVKLNLIRE 163


>gi|254523546|ref|ZP_05135601.1| Tetratricopeptide repeat family protein [Stenotrophomonas sp.
           SKA14]
 gi|219721137|gb|EED39662.1| Tetratricopeptide repeat family protein [Stenotrophomonas sp.
           SKA14]
          Length = 212

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 33/90 (36%), Gaps = 6/90 (6%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
             IA+  + GW+         D    +      Y+KA+L L++     A +         
Sbjct: 31  VVIAIGAIAGWQW-----YQKDQGGKLASANVEYQKALLGLQQNKLDDASKAVKALEA-G 84

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           P +     + L  A  Q  AGK ++A +  
Sbjct: 85  PSSIYGDLAALQLAKAQVDAGKNEEALATL 114


>gi|159029354|emb|CAO90730.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 272

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 54/156 (34%), Gaps = 32/156 (20%)

Query: 67  FLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
            L++ +  +A E   + ++  P  +      LL+ A  +     Y  A +     +  +P
Sbjct: 82  RLQQGDLKQAIEPLEKLAQLNPQQSDY----LLLLAEAKQQIEDYAGATASYRSLLVSHP 137

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER------YTNSPYVKGAR 179
           ++        L G++       +   Q      +  +   ++R        N+P      
Sbjct: 138 QNLRA-----LTGLTN------LFLSQNRHTEAISLVKDTIDRALKAAADPNNP------ 180

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
             +    +     ++ +G+ Y ++  Y  A+  ++ 
Sbjct: 181 ASLIDIVSV----QLLLGKIYFEQQNYPEALNAYKQ 212


>gi|118082610|ref|XP_416208.2| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 554

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 70/204 (34%), Gaps = 24/204 (11%)

Query: 65  VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
              L  ++F+ A        +          + L   +  +  G Y++A    E    Q 
Sbjct: 31  EELLAGRDFTGAIALLE--FQRHA-GEQQEDADLWIGYCAFHLGDYKRALEEYEALTKQP 87

Query: 125 PESKNVDYV-----YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
             + +V +V     Y+ +GM               ++L  + +  +  ++++   +  + 
Sbjct: 88  SCNPDV-WVNLACTYFFLGM--YTQAEQAALKAPKSRLQNRLLFHLAHKFSDEKKLMNSH 144

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA---RLVEA 236
             +          ++ +   +  R  Y  AI  ++ +L          E +A    +   
Sbjct: 145 QNLQDIT----EDQLSLASIHYMRSHYQEAIDIYKCILLE------NREYLALNVYVALC 194

Query: 237 YVALALMDEAREVVSLIQERYPQG 260
           Y  L   D ++EV+++  ++ P  
Sbjct: 195 YYKLDYYDVSQEVLAVYLQQVPDS 218


>gi|67920457|ref|ZP_00513977.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
 gi|67857941|gb|EAM53180.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
          Length = 155

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 7/72 (9%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAAS 115
           RE+  ++  FL + NF KA E   +  +++P FA    R+++L      +S  +Y+QA  
Sbjct: 41  RELLRRSQSFLDKGNFQKAEELLTEAIKNYPDFAEAWNRRAVL-----YFSLERYEQAKK 95

Query: 116 LGEEYITQYPES 127
             E+ I   P  
Sbjct: 96  DCEQVIQLIPYH 107


>gi|326434630|gb|EGD80200.1| mbre TPR repeat protein [Salpingoeca sp. ATCC 50818]
          Length = 829

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 71/225 (31%), Gaps = 46/225 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQ--------CSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
              + +  + +F +A + + +           + P    A  S L      Y+ GKY +A
Sbjct: 320 NLGLTYDDKGDFDQAIDLYQKAKQIQAETLGNNHPGTA-AVCSSL--GNAYYAKGKYDKA 376

Query: 114 ASLGEEYI-----TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
            +  +E +         +  +    Y  +G  Y          ++  K M   +  + E+
Sbjct: 377 IAYYQEDLAITSEALGEKHPSAAQTYSNIGNVYYAQGEYDSAIKQYEKAMEINLEALGEK 436

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA---EH 225
           +  +                 A     IG  Y  +GEY  AI  F+     Y +    +H
Sbjct: 437 HPGT-----------------ANTHNNIGNVYFGKGEYDRAIEHFEKARKVYVETLGEKH 479

Query: 226 AEEAMAR--LVEAYVALALMDEAREV--------VSLIQERYPQG 260
              A+A   +  A  +    D A E         +  +   +P  
Sbjct: 480 PTTAIAYKGIGNALSSKGEHDTAIEYYAAAKAIRLETLGPTHPDT 524



 Score = 37.8 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 24/227 (10%), Positives = 59/227 (25%), Gaps = 41/227 (18%)

Query: 55  RYQREVYEK-AVLFLKEQNFSKAYEYFNQ--------CSRDFPFAGVARKSLLMSAFVQY 105
               + Y     ++  +  +  A + + +             P              V +
Sbjct: 396 PSAAQTYSNIGNVYYAQGEYDSAIKQYEKAMEINLEALGEKHPGTANTHN---NIGNVYF 452

Query: 106 SAGKYQQAASLGEEYITQY-----PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
             G+Y +A    E+    Y      +       Y   G+  A   +   +D         
Sbjct: 453 GKGEYDRAIEHFEKARKVYVETLGEKHPTTAIAY--KGIGNALSSKG-EHDTAIEYYAAA 509

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP--RFQLVLA 218
              R+       P    +        +++    V I        +++ A      Q +  
Sbjct: 510 KAIRLETLGPTHPDTAESFSDFGNAHSEIGEYGVAI--------DHLEAAKEIHLQTLGE 561

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREV--------VSLIQERY 257
            +    +       L  AY  +    +A +          +++ E++
Sbjct: 562 EHPTTAYT---FNNLAAAYDDMGEYSKAMKYYERARAIKAAVLGEKH 605


>gi|317486512|ref|ZP_07945336.1| tetratricopeptide [Bilophila wadsworthia 3_1_6]
 gi|316922241|gb|EFV43503.1| tetratricopeptide [Bilophila wadsworthia 3_1_6]
          Length = 847

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 31/103 (30%), Gaps = 18/103 (17%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +++FA     S  +C                +        + +++A    K   ++ A  
Sbjct: 1   MFRFAAAFLVSFMLCT---------------APVQAAGFEQTFKEAQAAYKTGKYADAAR 45

Query: 79  YF---NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
            F       +       A+  L  +A     A  Y  A ++ E
Sbjct: 46  LFVQTADLLKKAKETAKAQMVLGNAAIAYMQAEDYASAVTIYE 88


>gi|261263566|gb|ACX55120.1| Uty [Rattus norvegicus]
          Length = 1134

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/140 (14%), Positives = 38/140 (27%), Gaps = 42/140 (30%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A +  ++  
Sbjct: 100 EDYSKALSSYQRYYSL-----QTDYWKNAAFLYGLGLVYFYY--------NAFQWAIRAF 146

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198
             ++    N    K     +                 QLA              +  I  
Sbjct: 147 QEVLYVDPNFCRAKEIHLRLGFMFKVNTDYESSLKHFQLALRDSNVCTLSSVEIQFHIAH 206

Query: 199 YYLKRGEYVAAIPRFQLVLA 218
            Y  + +Y +A   ++ +L 
Sbjct: 207 LYEIQRKYHSAKAAYEQLLQ 226


>gi|261210908|ref|ZP_05925198.1| GGDEF family protein [Vibrio sp. RC341]
 gi|260839883|gb|EEX66483.1| GGDEF family protein [Vibrio sp. RC341]
          Length = 651

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 50/138 (36%), Gaps = 14/138 (10%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQ-CSRDFPFAG--VARKSLLMS 100
           D  L  + D      VY    L +     +  A EY N+            +  +     
Sbjct: 196 DTLLKLLPDYVDPSAVYNDVGLLMSTLGQYEPALEYLNKALEYRQQQGNPLLIAQVEHSL 255

Query: 101 AFVQYSAGKYQQAASLGEEYIT----QYPES--KNVDYVYYLVGMSYAQMIRDVPYDQRA 154
             V +  GKY+Q+    E +I       P +    + YV+  +G +Y ++      DQ  
Sbjct: 256 GDVYFKQGKYEQSI---EHFIQAEKLLSPSNYLFGLAYVHLGLGKAYVELNNFTEGDQ-H 311

Query: 155 TKLMLQYMSRIVERYTNS 172
               L Y+++  ++Y  S
Sbjct: 312 LLQALDYVNQHQDQYLQS 329


>gi|71906424|ref|YP_284011.1| TPR repeat-containing protein [Dechloromonas aromatica RCB]
 gi|71846045|gb|AAZ45541.1| TPR repeat [Dechloromonas aromatica RCB]
          Length = 796

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 32/249 (12%), Positives = 83/249 (33%), Gaps = 37/249 (14%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE-KAVLFLKEQNFSKAYEYFNQ 82
           L +   +A C++   E   + ++    +       E+Y  + ++  + ++ ++A    + 
Sbjct: 109 LLLACRLANCYVGSGELFKANELLSGLLARYPSVGELYLLRGLVLYQLRHDAQAEADLHL 168

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
           C    P +    ++L     +      Y++AA   +      P+  +V         +Y 
Sbjct: 169 CLGLAPNSA---QALAALGDIYRDRELYEEAADFVDRAYQLAPDDIHVA-----RARAYL 220

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSP-----------YVKGARFYVTVGRNQL-- 189
            +        R        ++ ++++  +                 A   +    + L  
Sbjct: 221 SLAL------RDWGKAADILAEVLQQAPSDVVAAVNRVAALIESGNALAAIDALEDALRV 274

Query: 190 -AA----KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
            A+     E+    +  +RG++  A+   +  +A    +         L+ AY  L  M+
Sbjct: 275 GASEPWVHEMLGAMF-AQRGDWKIAVENLEASVAREPTST---TGWNILIVAYSKLGEME 330

Query: 245 EAREVVSLI 253
           +A      I
Sbjct: 331 KAEAAAKKI 339


>gi|332800235|ref|YP_004461734.1| serine/threonine protein kinase with TPR repeats [Tepidanaerobacter
           sp. Re1]
 gi|332697970|gb|AEE92427.1| serine/threonine protein kinase with TPR repeats [Tepidanaerobacter
           sp. Re1]
          Length = 487

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 46/146 (31%), Gaps = 32/146 (21%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y K  LF + + + +A + + +     P            A       + + A  + EE
Sbjct: 370 LYLKGKLFFELKRYEEAVKVYEKLVSRNP---DDLNYRYRLACAYGLNSEQENAIDILEE 426

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ-RATKLMLQYMSRIVERYTNSPYVKGA 178
                  +K         GM Y        YDQ +  K    Y +  +    N       
Sbjct: 427 ------INKKTP------GMLYIVKKLGHAYDQKKDFKKARAYFNYAMRLDPNDE----- 469

Query: 179 RFYVTVGRNQLAAKEVEIGRY--YLK 202
                + R++L       G+Y  YL+
Sbjct: 470 -----LIRDRLEEY----GKYLGYLR 486


>gi|119490481|ref|ZP_01622942.1| Tetratricopeptide [Lyngbya sp. PCC 8106]
 gi|119453952|gb|EAW35107.1| Tetratricopeptide [Lyngbya sp. PCC 8106]
          Length = 868

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 83/254 (32%), Gaps = 46/254 (18%)

Query: 11  IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKE 70
           +       L   ALT+   I V   +      S    +    D +   ++  +    L  
Sbjct: 18  LSPQETPMLNLKALTVAVIIGVLAPILPMNLLSESPVIAQTPDEQKAEQLRIEGFKQLSI 77

Query: 71  QNFSKAYEYFNQCSRDF-PFAGVARKS--LLMSAFVQYSAGKYQQAASLGEE--YI---- 121
             +  A E      + +      + ++  L    +     G+ Q+A    +   ++    
Sbjct: 78  YQYQAAIESLQAALKIYQETGNFSGQAWSLYGLGWAYDDTGQLQKAIESYQASLFLAKEI 137

Query: 122 ---TQYPESKN-VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
                   + N + YVY  +G    Q+ + +  +Q A  L  +          N+ Y + 
Sbjct: 138 EDHRLEAFNFNLIGYVYLQLG----QIEKAIELNQEALTLARR----------NNFYWEE 183

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA-----NYSDAEHAEEAMAR 232
           A          LA    +IG  Y +  +YV A+   Q  LA     ++   E    A++ 
Sbjct: 184 AL--------FLA----DIGMAYFRLEKYVEAMRFSQQALAIAQKHDFKQIEAY--ALSD 229

Query: 233 LVEAYVALALMDEA 246
           L   +  L    +A
Sbjct: 230 LGNIFRVLGSTTQA 243


>gi|90412131|ref|ZP_01220137.1| hypothetical protein P3TCK_27579 [Photobacterium profundum 3TCK]
 gi|90326855|gb|EAS43240.1| hypothetical protein P3TCK_27579 [Photobacterium profundum 3TCK]
          Length = 249

 Score = 37.8 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 57/140 (40%), Gaps = 10/140 (7%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
            + +    ++ +    + E YEKAV   LKE++++ A   FN     +P +     +   
Sbjct: 111 TADKPESGETYSSDASENEAYEKAVNLILKEKDYAGAVTAFNSFLTTYPESTYKANAHYW 170

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
              + ++  +  +A+   +   +    +K  D     +G+  A+  +DV       +L  
Sbjct: 171 LGQLYFTQNQLAEASKEFKAVTSDEKSNKRSD-ALLKLGVI-AERSKDV-------ELAK 221

Query: 160 QYMSRIVERYTNSPYVKGAR 179
           +Y   ++  Y +S   + A 
Sbjct: 222 KYYQEVISTYPSSTSSRQAE 241



 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 40/124 (32%), Gaps = 23/124 (18%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               Y  A +    ++T YPES      +Y +G  Y          Q       +     
Sbjct: 140 KEKDYAGAVTAFNSFLTTYPESTYKANAHYWLGQLYFT--------QNQLAEASKEFKA- 190

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           V     S     A   + V   +  +K+VE+ + Y             Q V++ Y  +  
Sbjct: 191 VTSDEKSNKRSDALLKLGVIAER--SKDVELAKKYY------------QEVISTYPSSTS 236

Query: 226 AEEA 229
           + +A
Sbjct: 237 SRQA 240


>gi|330995090|ref|ZP_08319007.1| tetratricopeptide repeat protein [Paraprevotella xylaniphila YIT
           11841]
 gi|329576666|gb|EGG58169.1| tetratricopeptide repeat protein [Paraprevotella xylaniphila YIT
           11841]
          Length = 250

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 8/68 (11%), Positives = 17/68 (25%), Gaps = 4/68 (5%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           +A      + + +A   +    +       A           Y   +   A    E    
Sbjct: 27  QADSAYAAEKYKEAIPIYTALLKK---GEHA-DIYYNLGNCYYKTDRLALAILNYERAAL 82

Query: 123 QYPESKNV 130
             P + +V
Sbjct: 83  LDPGNSDV 90


>gi|288925760|ref|ZP_06419691.1| aerotolerance-related exported protein [Prevotella buccae D17]
 gi|288337415|gb|EFC75770.1| aerotolerance-related exported protein [Prevotella buccae D17]
          Length = 262

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 8/69 (11%), Positives = 22/69 (31%), Gaps = 4/69 (5%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           E A     + ++ +A + + +  R    +G             +      +A    E  +
Sbjct: 38  ENADAEYTKGDYQQAVKDYEEVLR----SGANADIYYNLGNAYFRLDNITKAILNYERAM 93

Query: 122 TQYPESKNV 130
              P + ++
Sbjct: 94  LMQPGNADI 102


>gi|209526542|ref|ZP_03275068.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
 gi|209493048|gb|EDZ93377.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
          Length = 728

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 61/167 (36%), Gaps = 32/167 (19%)

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +  + + LL  A   Y  G+Y QA +  +  +   P    V YV           + +V 
Sbjct: 13  SNQSPEVLLHQAETSYLQGEYDQAIAACQRALELKPNWPPV-YV----------TMGNVS 61

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
             +   +  ++  ++ +E   N   +  A   +              G  + K+G+  +A
Sbjct: 62  QGRGQIEEAIRCYAKALEFDPN---LPQAHANL--------------GSMFYKQGKLESA 104

Query: 210 IPRFQLVLANYSDAEHAE----EAMARLVEAYVALALMDEAREVVSL 252
           I  +Q  +A   D          A+ ++     AL +  +A ++ SL
Sbjct: 105 IDSYQKAIALKPDLTAVYVNLARALRQMGRESEALIVEQKANQIHSL 151


>gi|158339013|ref|YP_001520190.1| pentapeptide repeat-containing serine/threonine kinase
           [Acaryochloris marina MBIC11017]
 gi|158309254|gb|ABW30871.1| serine/threonine kinase with pentapeptide repeats [Acaryochloris
           marina MBIC11017]
          Length = 699

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 35/252 (13%), Positives = 76/252 (30%), Gaps = 55/252 (21%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
           F LT+   I      G +   S      +  + + Q  + ++      + ++ +A   + 
Sbjct: 377 FTLTLLGGIGYVVAQGLQSAVSPKAITVAEVNRQVQGHL-QQGDQKFAQGDYQRALREYA 435

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESKNVDYVY 134
                      A +    +A   +++G         + A +     I   P S +    Y
Sbjct: 436 A----------AIQKDPENAEAHFNSGITKRRLNDLKGAIAHYTTAIRLKPTSVD---AY 482

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
              G+  +++   +          +   +  +           A        +++  K+ 
Sbjct: 483 NNRGLVRSELGDKL--------AAIADFTEAIRLNPQH---VQAYNNRGTIYSEVGKKQA 531

Query: 195 EIGRY-------------YLKR-------GEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
            I  Y             Y  R       G   AAI  +  V+    ++ +A +A     
Sbjct: 532 AIADYSQAVQIDAQYYEAYFNRGIVQSDLGNTKAAISDYSQVIRL--NSNYA-QAYNNRG 588

Query: 235 EAYVALALMDEA 246
            AYV L  + +A
Sbjct: 589 IAYVNLGNLKKA 600


>gi|148655298|ref|YP_001275503.1| hypothetical protein RoseRS_1146 [Roseiflexus sp. RS-1]
 gi|148567408|gb|ABQ89553.1| Tetratricopeptide TPR_2 repeat protein [Roseiflexus sp. RS-1]
          Length = 1091

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 24/65 (36%), Gaps = 3/65 (4%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y   +L+ +  ++ +A E     + D      A  +  M        GK  +AA   E+ 
Sbjct: 270 YSLGLLYQERGDYQRAIELLQSAAGDQ---EYALSAHYMLGQAYQELGKLPEAAHEYEQT 326

Query: 121 ITQYP 125
           I   P
Sbjct: 327 IRLLP 331


>gi|332708493|ref|ZP_08428468.1| hypothetical protein LYNGBM3L_26290 [Lyngbya majuscula 3L]
 gi|332352757|gb|EGJ32322.1| hypothetical protein LYNGBM3L_26290 [Lyngbya majuscula 3L]
          Length = 294

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 39/115 (33%), Gaps = 20/115 (17%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMS 100
            D+ L S  +    + + ++        NF  A   F    + + ++P+  +A +     
Sbjct: 9   SDLKLASPQNPEKAKALAQQGEADRLMGNFEAALAKFTDALELNSNYPW-ALAHRGQ--- 64

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPE------SKNVDY-----VYYLVGMSYAQM 144
               Y   +YQ+A +     I   P        + V Y      YY + ++    
Sbjct: 65  --TYYQIKRYQEARTDFSRAIDLNPNYLWALAHRGVTYRFMGEAYYTMAVADLDR 117


>gi|148733188|gb|ABR09252.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 39 [Homo sapiens]
          Length = 1285

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYXSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|326797333|ref|YP_004315153.1| hypothetical protein Marme_4117 [Marinomonas mediterranea MMB-1]
 gi|326548097|gb|ADZ93317.1| Tetratricopeptide TPR_1 repeat-containing protein [Marinomonas
           mediterranea MMB-1]
          Length = 295

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 36/117 (30%), Gaps = 26/117 (22%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYL---DSVTDVRYQREVYEKAVLFLKEQN 72
            +  ++F      ++ +  L G   Q  +D      ++  +     E  + A L      
Sbjct: 7   THNSFRFGSLTATALLLVMLAGCSSQVIKDGEPVIENAPYEAESAEEALKLAHLLRDNGR 66

Query: 73  FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ----------QAASLGEE 119
           +  AYE +              K  L  AFV     +Y           +A +L + 
Sbjct: 67  YKAAYEVYENMD---------EKGQLEGAFVL----EYASISASFLPPLEAIALFKR 110


>gi|301064193|ref|ZP_07204636.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
 gi|300441638|gb|EFK05960.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
          Length = 260

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 49/153 (32%), Gaps = 32/153 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRD--FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
               ++L   ++ KA + F + + +  +     A           ++ G Y++A    E 
Sbjct: 113 NMGTVYLLMGDWPKAVDCFKKAAENIKYQTPHYAYN---NLGLAYFNMGDYEKAIQNYEM 169

Query: 120 YITQYPESKNV-DY-----VYYLVG------MSYAQMIRDVPYDQRA------------- 154
            I           Y     VY   G      ++Y + +   P D +              
Sbjct: 170 SIRL--SHSYAFAYVNLAKVYEAKGNLVEAEVNYREAVLYRPRDPQVLLGFAELLIKEDK 227

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           TK   + + +I++    S     AR  +   +N
Sbjct: 228 TKEAKETLIKIIKEDPRSAAGTEARKLLAKLQN 260


>gi|255646412|gb|ACU23685.1| unknown [Glycine max]
          Length = 379

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/122 (14%), Positives = 36/122 (29%), Gaps = 19/122 (15%)

Query: 45  DVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSA 101
           D   +   + R   ++   KAV  + + N  +A     +     P +    A ++ +   
Sbjct: 92  DPSAEITEEQRDAAQLAKSKAVDAMSQGNLDEALAQLTEAILLNPQSAILYATRASI--- 148

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
                  K   A    +  +   P+S      Y + GMS A +           +     
Sbjct: 149 --YMKLKKPNAAIRDADTALKINPDSAKG---YKIRGMSRAML--------GLWEEAASD 195

Query: 162 MS 163
             
Sbjct: 196 FH 197


>gi|224496034|ref|NP_001139026.1| tetratricopeptide repeat protein 31 [Danio rerio]
 gi|220673219|emb|CAX14395.1| novel protein with a RNA recognition motif. (a.k.a. RRM, RBD, or
           RNP domain) (zgc:123010) [Danio rerio]
          Length = 474

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 46/148 (31%), Gaps = 29/148 (19%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQC-----SRDFPFAGVARKSLL 98
           +V   S    +    + EK + F++E  +++A   F            F F         
Sbjct: 172 EVIGFSEAKTKRSASLVEKGIRFVQEGQYTQAVSLFTEAIKCDPKDYRF-FG-------- 222

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
             ++      +Y  A +  E+ I   P+       YY  G +   + R            
Sbjct: 223 NRSYCYCCLEQYALALADAEKSIQMAPDWPKG---YYRRGSALMGLKRYS--------EA 271

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGR 186
            + M ++++   +      A   +   +
Sbjct: 272 EKAMEQVLKLDGDCE---EAVNDLLYCK 296


>gi|206889255|ref|YP_002248681.1| peptidase, M48 family [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206741193|gb|ACI20250.1| peptidase, M48 family [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 427

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 30/64 (46%), Gaps = 8/64 (12%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA--RKSLLMSAFVQYSAGKYQQAASLGEE 119
           E+A  ++K +N+++A    ++    +  +  A   ++L+       +  KY +A S  + 
Sbjct: 281 EEAKKYIKSRNYTQALNLLDRAIARY-GSNYAYTYRALVNL-----NLKKYNEAISDADR 334

Query: 120 YITQ 123
            I+ 
Sbjct: 335 AISL 338


>gi|159028018|emb|CAO87978.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 421

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 72/191 (37%), Gaps = 24/191 (12%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
           ++  R +  +  T  R   + Y++   + +E+N+  A  ++ Q     P      ++ L 
Sbjct: 62  KEYDRSLSPEIPTFQRSAEDFYQQGWHYAQEKNYQLAIAFYQQAIAINPQ-FW--QAYLQ 118

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
            A V Y   + +Q  S   + +   P   +    YY +G+S  ++          T+  L
Sbjct: 119 RAEVYYHNQQDRQVLSDCRQVLQLKP---DCSQAYYYLGLSRQRL--------GYTQSSL 167

Query: 160 QYMSRIV---ERYTNSPYVKG-ARFYVTVGRNQLAAKEVEIGRYYLKR----GEYVAAIP 211
           +   + +   +      Y +G A   ++      A K+ +I     K+      Y A I 
Sbjct: 168 EAYGKAIAIDQNNPQFYYQRGLALEELSELPA--ARKDFQIAAKKFKQQGNFRRYHAIIN 225

Query: 212 RFQLVLANYSD 222
           + + V  +Y  
Sbjct: 226 KLKYVHKSYRQ 236


>gi|332296032|ref|YP_004437955.1| Tetratricopeptide TPR_1 repeat-containing protein
           [Thermodesulfobium narugense DSM 14796]
 gi|332179135|gb|AEE14824.1| Tetratricopeptide TPR_1 repeat-containing protein
           [Thermodesulfobium narugense DSM 14796]
          Length = 204

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 32/90 (35%), Gaps = 8/90 (8%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
             RE    A  F  ++ + KA  ++N     +         +    A   +   +Y +A 
Sbjct: 34  SDREYLNAANSFFDKKEYFKAISFYNLAIESN----PKLVDAYFNRANTYFKLHEYDKAV 89

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
               + I   P++      Y   G+SY ++
Sbjct: 90  QDFSKVIELNPKN---AEAYEGRGLSYYKL 116


>gi|300727702|ref|ZP_07061088.1| TPR domain protein [Prevotella bryantii B14]
 gi|299774990|gb|EFI71596.1| TPR domain protein [Prevotella bryantii B14]
          Length = 246

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 42/123 (34%), Gaps = 13/123 (10%)

Query: 72  NFSKAYEYF-NQCSRDFPFAGVARKSLLM-SAFVQYSAGKYQQAASLGEEYITQ-YPESK 128
           ++  A +Y      +   FA   R      +A   ++  KYQ++  L E+ +   Y   +
Sbjct: 85  DYENAIKYLDEAIPQLDHFAPHERSVYYYCNAESHFNLQKYQESVPLYEKMLELCY--DE 142

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
               V Y +G  Y          Q    L   Y    ++ Y     +   +  +   +N 
Sbjct: 143 EKADVLYHLGFCYMF--------QEDWLLARDYYRMALKYYKKYLNIPEKQARMAQIKNM 194

Query: 189 LAA 191
           +A 
Sbjct: 195 IAG 197


>gi|255075559|ref|XP_002501454.1| predicted protein [Micromonas sp. RCC299]
 gi|226516718|gb|ACO62712.1| predicted protein [Micromonas sp. RCC299]
          Length = 524

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 49/164 (29%), Gaps = 18/164 (10%)

Query: 42  SSRDVYLDSVTDVRYQ-REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA-----RK 95
           +S    LD    ++ +  E+     L L    + K            P    A     RK
Sbjct: 368 ASLSAMLDEARKLKDEGNELLAGGKLALARSKYEKTVRNLEGLRGLDPAEHEAVYDLRRK 427

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           + L  A     +G++  A +  E+ +    E  +     +   +S+              
Sbjct: 428 TTLNLAAALQRSGEHAAAIARLEKLLD---EDPDDAKALWRRSVSFLATHEHA------- 477

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL-AAKEVEIGR 198
                 +SR  E   ++     A+      R    AA+E  +  
Sbjct: 478 -AARSDLSRCAEIDPSTAEEVRAQLRKVERREIEGAARERAVAE 520


>gi|224086191|ref|XP_002193025.1| PREDICTED: cell division cycle protein 27 isoform 3 [Taeniopygia
           guttata]
          Length = 832

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 51/196 (26%), Gaps = 50/196 (25%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 594 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 643

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP-------YVKGARFY 181
           N    +Y +GM Y +        Q    L   +  + ++    S         V+ A   
Sbjct: 644 N---AWYGLGMIYYK--------QEKFSLAEMHFQKALDINPQSSVLLCHIGVVQHALKK 692

Query: 182 VTVGRNQLAAKEVEI-----------GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
                + L  K + I                   +Y +A+   + +              
Sbjct: 693 SEKALDTL-NKAINIDPKNPLCKFHRASVLFANEKYKSALQELEELKQIVPKESLVY--- 748

Query: 231 ARLVEAYVALALMDEA 246
             + + Y  L     A
Sbjct: 749 FLIGKVYKKLGQTHLA 764


>gi|218437184|ref|YP_002375513.1| hypothetical protein PCC7424_0175 [Cyanothece sp. PCC 7424]
 gi|218169912|gb|ACK68645.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7424]
          Length = 156

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 45/134 (33%), Gaps = 21/134 (15%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASL 116
           E+  +A   L+     +A     Q   ++P FA    R+++L      Y    Y+Q+   
Sbjct: 42  ELLNRAQFLLEMGQSDQAEATLTQIIHNYPDFAEAWNRRAVL-----YYLQKCYEQSKQD 96

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            E+ I   P        ++ +G+  A +              ++   + ++      Y  
Sbjct: 97  CEQVIRLNPHHFG---AWHGLGLCQAAL--------GNYTKAIEAFRKALDIQP---YAL 142

Query: 177 GARFYVTVGRNQLA 190
             +  +      ++
Sbjct: 143 INQKLILECTAMMS 156


>gi|110597396|ref|ZP_01385683.1| TPR repeat:Tetratricopeptide TPR_3:Tetratricopeptide TPR_4
           [Chlorobium ferrooxidans DSM 13031]
 gi|110340940|gb|EAT59411.1| TPR repeat:Tetratricopeptide TPR_3:Tetratricopeptide TPR_4
           [Chlorobium ferrooxidans DSM 13031]
          Length = 1055

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 27/223 (12%), Positives = 66/223 (29%), Gaps = 67/223 (30%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP---------FAGVARKSLLMS----- 100
           +    ++   V+ L++++  KA + F +    +P            +     L +     
Sbjct: 46  KQADSLHMLGVIALQKKDHRKAVDLFGKAIDIYPRHSAFYNNRGNALYELRQLDAALASF 105

Query: 101 ----------AFVQ-------YSAGKYQQAASLGEEYITQ-YPESKNVDYVYYLVG--MS 140
                     A          Y  G+++ A +  ++ +   Y    ++   YY  G  + 
Sbjct: 106 DQAIALKPDFADAYVNQGMVLYDQGEFKAALASFDKALDLKY----DLAKAYYYKGNILH 161

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
           +     D           L    + +    +  Y +       V +++    E++     
Sbjct: 162 HLNQFGD----------ALASFDQAIALKPD--YAEAYANRGLVLKDR---NELD----- 201

Query: 201 LKRGEYVAAIPRFQLVLANYSD--AEHAEEAMARLVEAYVALA 241
                  AA+  F   +    D  A    +A+  L++      
Sbjct: 202 -------AALASFGHAIKLQPDLVAPRVNKAITLLLKGNFKEG 237


>gi|323174181|gb|EFZ59809.1| cellulose synthase operon protein C [Escherichia coli LT-68]
          Length = 932

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 77/236 (32%), Gaps = 36/236 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 426 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 482

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 483 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 539

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197
             Q         +  +V R   S  V      +   G+   A             ++ + 
Sbjct: 540 RAQWN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 593

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 594 DWAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 646



 Score = 35.5 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 339 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 395

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 396 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 441

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 442 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 490

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + ++ P      Y   L
Sbjct: 491 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 520


>gi|315608290|ref|ZP_07883280.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
 gi|315250071|gb|EFU30070.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
          Length = 262

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 8/69 (11%), Positives = 22/69 (31%), Gaps = 4/69 (5%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           E A     + ++ +A + + +  R    +G             +      +A    E  +
Sbjct: 38  ENADAEYTKGDYQQAVKDYEEVLR----SGANADIYYNLGNAYFRLDNITKAILNYERAM 93

Query: 122 TQYPESKNV 130
              P + ++
Sbjct: 94  LMQPGNADI 102


>gi|282164146|ref|YP_003356531.1| hypothetical protein MCP_1476 [Methanocella paludicola SANAE]
 gi|282156460|dbj|BAI61548.1| conserved hypothetical protein [Methanocella paludicola SANAE]
          Length = 348

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 17/165 (10%), Positives = 41/165 (24%), Gaps = 37/165 (22%)

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
              + +A +      +  P    A                   A     E +   P+  +
Sbjct: 38  RGQYQEAIKELEAAVKMKPENPEAH---FDLGLAYNMMDDLDNAVKEYNETLRLKPDHLD 94

Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP--------------YV 175
                 ++ ++ A +              L     ++ +   S               Y+
Sbjct: 95  A-----MLNLANAYLA------MGNADDALGLFKDMIAKNPESAEVFASFGVALASAGYL 143

Query: 176 KGARFYVTVGRNQLAA------KEVEIGRYYLKRGEYVAAIPRFQ 214
             A       +  +A         + +   Y+ +GE   AI  ++
Sbjct: 144 DDAEEM---LKKAIAKDPRSFDGHLFLAGVYMDKGEVDDAIKEYR 185


>gi|154289277|ref|XP_001545282.1| hypothetical protein BC1G_16179 [Botryotinia fuckeliana B05.10]
 gi|150849721|gb|EDN24914.1| hypothetical protein BC1G_16179 [Botryotinia fuckeliana B05.10]
          Length = 611

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 46/145 (31%), Gaps = 28/145 (19%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108
           +D    +  Y     ++ +Q + KAYE + Q        P              + Y   
Sbjct: 295 SDQSDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIN 348

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSY---AQMIRDVPYDQRATKLMLQYMSRI 165
           +Y+ A       I   P    +  V+Y +G  Y      I D           L    R 
Sbjct: 349 QYRDALDAYSRAIRLNP---YISEVWYDLGTLYESCNNQIND----------ALDAYQRA 395

Query: 166 VERYTNSPYVKGARFYVTVGRNQLA 190
            E   N+ ++   +  + + R+  A
Sbjct: 396 AELDPNNVHI---KARLQLLRSGQA 417


>gi|149926302|ref|ZP_01914564.1| cellulose synthase operon protein C [Limnobacter sp. MED105]
 gi|149825120|gb|EDM84332.1| cellulose synthase operon protein C [Limnobacter sp. MED105]
          Length = 1322

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 3/58 (5%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           YE     L+  N + A +YF       P    AR   +  A + ++ G+  +A +L +
Sbjct: 472 YENGKRELRLGNEAAARQYFEDTVAFNPAYPWAR---VELARLYHAQGRKDEARALID 526


>gi|145235423|ref|XP_001390360.1| import receptor subunit tom-70 [Aspergillus niger CBS 513.88]
 gi|134058042|emb|CAK38271.1| unnamed protein product [Aspergillus niger]
          Length = 629

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 48/141 (34%), Gaps = 20/141 (14%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGV 92
           +G +  ++ D  L    +       Y +A L      F++A + + +     R F ++  
Sbjct: 389 LGNKDAAADDFELAITHNKDDPDIYYHRAQLHFILGEFAEAAKDYQKSIDLDRTFIYSH- 447

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
                +     QY  G    A +     +  + E  +V Y YY           ++  DQ
Sbjct: 448 -----IQLGVTQYKMGSVASAMATFRRSVKNFEEVPDV-YNYY----------GELLLDQ 491

Query: 153 RATKLMLQYMSRIVERYTNSP 173
           +     ++   + VE    S 
Sbjct: 492 QNFSEAIEKFDKAVEMEKQSK 512


>gi|91202600|emb|CAJ72239.1| hypothetical protein kustd1494 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 847

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 61/208 (29%), Gaps = 43/208 (20%)

Query: 73  FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
           + KA E   +      F   A               +  QA S  ++ +         DY
Sbjct: 547 YRKAIEKSQETG----FTRYAT-VHYNMGNAYKKKNQLPQAISSYKKALQI-----KQDY 596

Query: 133 --VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
              +  +G  Y +M +             +  +  +           A   + V  N+  
Sbjct: 597 KQAHNNLGKIYFEMEQYDD--------AFEEYNTALAIDPG---FADAHNNLGVLYNKRG 645

Query: 191 AKEVEIGRY-------------YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR----L 233
             E  I  Y             Y   G    +  +F+L +  Y  A   ++A+A     L
Sbjct: 646 MDEDAIAAYKKAVAADPLNSDAYYNLGNVYESKNQFELAVEAYQSALAIDQALAYAHNNL 705

Query: 234 VEAYVALALMDEA-REVVSLIQER--YP 258
              Y    ++D+A  E    I+    YP
Sbjct: 706 GALYDKKGILDKAIEEYRQAIKYDPLYP 733


>gi|112983280|ref|NP_001036957.1| Hsc70/Hsp90-organizing protein HOP [Bombyx mori]
 gi|60592739|dbj|BAD90844.1| Hsc70/Hsp90-organizing protein HOP [Bombyx mori]
          Length = 541

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 27/71 (38%), Gaps = 7/71 (9%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAAS 115
            ++ +K    L  QNF +A + + +     P      + +S          A  Y+ A  
Sbjct: 5   EQLKKKGNDALVNQNFDEAIKCYTEAIALDPTNHVLYSNRSA-----AHAKAENYEAALE 59

Query: 116 LGEEYITQYPE 126
             E+ ++ +P 
Sbjct: 60  DAEKTVSLHPN 70


>gi|332711805|ref|ZP_08431736.1| glycosyltransferase [Lyngbya majuscula 3L]
 gi|332349783|gb|EGJ29392.1| glycosyltransferase [Lyngbya majuscula 3L]
          Length = 694

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 61/219 (27%), Gaps = 46/219 (21%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
              +Y   +L  +   +  A E+FN      P +  A  SL      Q   G+  +A   
Sbjct: 38  PDALYGLGMLAQQVGKYQTAEEFFNTTLLVNPESFKAWFSLGNLRQAQ---GQLSEAVEA 94

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            +  +   P S           ++           Q   +  +    + +E   N     
Sbjct: 95  YQRALALQPNS-----------VALYNNFGYALQQQGKWENAIACYQKALEIQPNCAEAD 143

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR-----------FQLVLANYSDAEH 225
                    + QL+           ++  Y AA+              +  +A Y  A  
Sbjct: 144 VNLGNALYAQGQLSQ----------EKQAYYAALNHDLGVTRKIGGDVKTAVAYYQKAIA 193

Query: 226 AEEAMARLVEAYVALA--------LMDEAREVVSLIQER 256
            +     LV ++  L         L D      ++++  
Sbjct: 194 IQ---PDLVNSHYTLGVALQEQGKLDDAIASYNNVLKLN 229


>gi|239906810|ref|YP_002953551.1| N-acetylmuramoyl-L-alanine amidase family protein [Desulfovibrio
           magneticus RS-1]
 gi|239796676|dbj|BAH75665.1| N-acetylmuramoyl-L-alanine amidase family protein [Desulfovibrio
           magneticus RS-1]
          Length = 389

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 29/102 (28%), Gaps = 11/102 (10%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           +   +AV   + W R         S        E+  +    L   N +KA    ++   
Sbjct: 7   VLSFLAVAGGLAWLR--------PSALFAASADELAGEGQAELTGGNVAKALVLLHEAES 58

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
             P      +   +     +  G  + A +     +   PE 
Sbjct: 59  KDPRND---RVQALLGRAYFQQGDARTALTHFTRAVRLNPED 97


>gi|119357814|ref|YP_912458.1| LemA family protein [Chlorobium phaeobacteroides DSM 266]
 gi|119355163|gb|ABL66034.1| LemA family protein [Chlorobium phaeobacteroides DSM 266]
          Length = 195

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 37/110 (33%), Gaps = 11/110 (10%)

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE--VEI 196
           +S  Q +      Q A    L  +  +VERY +      A       +NQL   E  + +
Sbjct: 89  LSDPQAMTKFQGAQGALSSSLSRLMLVVERYPD----LKANQNFRDLQNQLEGTENRITV 144

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
                 R  Y AA+  F   +  + ++      +    + Y       +A
Sbjct: 145 A-----RQRYNAAVETFNFSIRQFPNSLTNSLMLKLKAKEYFKADAAAKA 189


>gi|115380266|ref|ZP_01467282.1| TPR-domain containing protein, putative [Stigmatella aurantiaca
           DW4/3-1]
 gi|310821105|ref|YP_003953463.1| tpr domain-containing protein [Stigmatella aurantiaca DW4/3-1]
 gi|115362721|gb|EAU61940.1| TPR-domain containing protein, putative [Stigmatella aurantiaca
           DW4/3-1]
 gi|309394177|gb|ADO71636.1| TPR repeat protein [Stigmatella aurantiaca DW4/3-1]
          Length = 435

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 28/74 (37%), Gaps = 1/74 (1%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           Q E+Y +    LK  N+ +A   F              ++LL  A    +    + AA +
Sbjct: 3   QSELYRRGYEQLKAGNYDEAKRLFLAHEEK-AGTASETQALLRQAAASLAKSDLEGAAKV 61

Query: 117 GEEYITQYPESKNV 130
            E+ + + P    +
Sbjct: 62  YEQLLERNPSLPEI 75


>gi|61402475|gb|AAH91822.1| Zgc:110801 [Danio rerio]
          Length = 162

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 42/142 (29%), Gaps = 21/142 (14%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQA 113
              ++ EKA  + K++++  A +Y+ +     P      + +SL            Y  A
Sbjct: 9   SAEKLKEKANDYFKDKDYENAIKYYTEALDLNPTNPIYYSNRSL-----SYLRTECYGYA 63

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
            +     +      KN    YY    S   +           K  L+    +V    N  
Sbjct: 64  LADATRALEL---DKNYLKGYYRRATSNMAL--------GKFKAALKDYETVVRVRPNDK 112

Query: 174 YVKGARFYVTVGRNQLAAKEVE 195
               A+         +  K  E
Sbjct: 113 ---DAKMKYQECNKIVKQKAFE 131


>gi|332528870|ref|ZP_08404844.1| cellulose synthase domain-containing protein [Hylemonella gracilis
           ATCC 19624]
 gi|332041729|gb|EGI78081.1| cellulose synthase domain-containing protein [Hylemonella gracilis
           ATCC 19624]
          Length = 1135

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 70/220 (31%), Gaps = 36/220 (16%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE----VYEKAVLFLKEQNFSKA 76
           + AL +     +C + G   +++      +V D +  +E    +  +A L+ +     +A
Sbjct: 11  RIALVLAL---LCGVAGQAARAAPGEDPRAVQDAQEAQETHDALLAQARLWQERDRDDRA 67

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            E   +  R FP       + L  A+++  AG+ Q A    E      PE  ++      
Sbjct: 68  REVLAKLLRVFPDDPDGV-AQL--AYIERRAGQPQAARQGLERLRALSPEHPDIAR---- 120

Query: 137 VGMSYAQMIRDVPYDQRATKLML-------QYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
             +     +  V   + A    L       Q ++ + E Y   P                
Sbjct: 121 --LETLFRLDGVDQPRLAQARALARDGQPAQALAVLRELYPVGPPTGDLALEYWKIV--- 175

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
           A  E+           +  A+     ++  Y D      A
Sbjct: 176 ADTEL----------GWEPALAGLTRLITQYPDTPRYRLA 205


>gi|322705849|gb|EFY97432.1| DNAJ domain containing protein [Metarhizium anisopliae ARSEF 23]
          Length = 696

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 33/82 (40%), Gaps = 4/82 (4%)

Query: 50  SVTDVRYQREVYEKA-VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
            V       E Y+ A   F K++N++KA E +++    FP +      L   A  + S G
Sbjct: 189 PVPTALDDAEAYKAAGNRFFKDKNYTKAIEQYSKAVDLFPDSP---TYLSNRAAARMSNG 245

Query: 109 KYQQAASLGEEYITQYPESKNV 130
           +Y  A           P++  +
Sbjct: 246 QYAAALEDCSRAADLDPQNSKI 267


>gi|311267002|ref|XP_003131355.1| PREDICTED: cell division cycle protein 27 homolog, partial [Sus
           scrofa]
          Length = 721

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 31/104 (29%), Gaps = 28/104 (26%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 587 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 636

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           N    +Y +GM Y +        Q    L   +  + ++    S
Sbjct: 637 N---AWYGLGMIYYK--------QEKFSLAEMHFQKALDINPQS 669


>gi|300726849|ref|ZP_07060279.1| putative tetratricopeptide repeat domain protein [Prevotella
           bryantii B14]
 gi|299775962|gb|EFI72542.1| putative tetratricopeptide repeat domain protein [Prevotella
           bryantii B14]
          Length = 1086

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 22/50 (44%)

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
            + +  NYSD EH ++    L   Y      + A   +  +++ YPQ  W
Sbjct: 601 LRRITDNYSDYEHLDDVYYHLFLLYSREGQANRANTYIEKLKDDYPQSQW 650



 Score = 35.5 bits (81), Expect = 9.1,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 55/151 (36%), Gaps = 33/151 (21%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVA------------------RKSLLMSAFVQYSAGKY 110
           +E   ++A  Y  +   D+P +                       SL  + +  + A +Y
Sbjct: 627 REGQANRANTYIEKLKDDYPQSQWTTLLTDPYYIENAKFGEQIEDSLYAATYEAFKADRY 686

Query: 111 QQ--AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           Q+  A +   EY  ++P   N D   ++ GMS              TK  +  M  IV++
Sbjct: 687 QEVKANTSISEY--RFPTGANRDKFLFIGGMSKLNS--------GDTKGCISDMKTIVDK 736

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           + NS   + A   +    +    +++   ++
Sbjct: 737 FANSRLAEMAGMILNGVND---GRKLHGAKF 764


>gi|221106374|ref|XP_002163424.1| PREDICTED: similar to polaris, partial [Hydra magnipapillata]
          Length = 867

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 78/280 (27%), Gaps = 41/280 (14%)

Query: 2   SAVLGRAICIFEAWAYQLYKFALTIFFSIAVC-FLVGWERQSSRDVYLDSVTDVRYQREV 60
                +A  I + +  +  K       +++   FL G   QS +   +   +D      +
Sbjct: 466 QKDFTKAAQILKKFEKKSSKMQSQAAVNLSFLYFLEGDVAQSDKHAEIAISSDRYNPAAL 525

Query: 61  YEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
             K        N+ KA +Y+ +               ++L           K+ +A    
Sbjct: 526 LNKGNAEYYNGNYLKAKDYYAEALNIEASC------TEALHNLGLCYKKMSKFDEALEC- 578

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
             +        N   V   +G  Y           + T   L++  +++           
Sbjct: 579 --FHKLNLVLPNNAEVICQIGQIYEND--------KNTAEALEWYQQLLNIVPTD---CE 625

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR----- 232
               V +   +   K       Y     Y + I     +   Y DA+  E+A+       
Sbjct: 626 VLRKVAMLYEEDGDKSQAFQYMYEAFRYYPSCIKTLVWLGGYYIDAQFIEKAITYFERAV 685

Query: 233 ------------LVEAYVALALMDEAREVVSLIQERYPQG 260
                       L   Y       +A E    I +++P+ 
Sbjct: 686 QVQPLEVRWHLMLATCYRKAGNYTQAMETYKEIHKKFPEN 725


>gi|195441399|ref|XP_002068497.1| GK20387 [Drosophila willistoni]
 gi|194164582|gb|EDW79483.1| GK20387 [Drosophila willistoni]
          Length = 1185

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 53/141 (37%), Gaps = 24/141 (17%)

Query: 133 VYYLVGMSYAQM------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------R 179
            Y L+ +    +       RD   +++  +  L    +++     + +           +
Sbjct: 601 AYSLIALGNFSLQTLHQPSRDKEKERKHQEKALAIFKQVLRNDCRNIWAANGIGAVLAHK 660

Query: 180 FYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
             V   R+  A  +E         + I   Y+++ +Y++AI  ++  +  +    +  E 
Sbjct: 661 GCVIEARDIFAQVREATAEFCDVWLNIAHIYVEQKQYISAIQMYENCMKKFFKHNNV-EV 719

Query: 230 MARLVEAYVALALMDEAREVV 250
           M  L  AY+    + EA+ V+
Sbjct: 720 MQYLARAYLRANKLVEAKAVL 740


>gi|329851451|ref|ZP_08266208.1| diguanylate cyclase GGDEF domain protein [Asticcacaulis
           biprosthecum C19]
 gi|328840297|gb|EGF89869.1| diguanylate cyclase GGDEF domain protein [Asticcacaulis
           biprosthecum C19]
          Length = 595

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 26/81 (32%), Gaps = 9/81 (11%)

Query: 106 SAGKYQQAASLGEEYITQY--PESKNVDYVYYLVGMSYAQMIRDVPYDQRA-TKLMLQYM 162
            AG Y    +    +         +  D V  L+ +     +RD   D     +L     
Sbjct: 189 KAGDYDLVVADLNRFRRLNEALGHERADIVLELLAL----RLRDAFPDHAVLARLGEDEF 244

Query: 163 SRIVER-YTN-SPYVKGARFY 181
           + + +R +   S  ++ A   
Sbjct: 245 AVLTQRGFPRVSERMRNALER 265


>gi|330002534|ref|ZP_08304358.1| tetratricopeptide repeat protein [Klebsiella sp. MS 92-3]
 gi|328537296|gb|EGF63553.1| tetratricopeptide repeat protein [Klebsiella sp. MS 92-3]
          Length = 389

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 58/189 (30%), Gaps = 42/189 (22%)

Query: 64  AVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
              ++    + +A + F Q     DF    + +   +  A        +Q A  + E  +
Sbjct: 114 GRDYMAAGLYDRAEDMFKQLVDETDFRLGALQQLLQIYQA-----TSDWQSAIEVAERLV 168

Query: 122 TQ----YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
                 +             G      I +   +    ++    + +             
Sbjct: 169 KLGKEKH------------RG-----EIANFWCELALQQMAANDLDK-----------AM 200

Query: 178 ARFYVTVGRNQL-AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
           A        ++  A   + +GR ++++G+Y  A+   + V+    D E   E +  L   
Sbjct: 201 ALLRKGAAADRTSARVSIMMGRVWMEKGDYAKAVESLERVID--QDKELVGETLEMLQTC 258

Query: 237 YVALALMDE 245
           Y  L   DE
Sbjct: 259 YQQLGKTDE 267


>gi|307297634|ref|ZP_07577440.1| putative transcriptional regulator, Crp/Fnr family [Thermotogales
           bacterium mesG1.Ag.4.2]
 gi|306916894|gb|EFN47276.1| putative transcriptional regulator, Crp/Fnr family [Thermotogales
           bacterium mesG1.Ag.4.2]
          Length = 335

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 9/67 (13%), Positives = 25/67 (37%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
              +  ++ +Y K +  ++ + +  A E        +  + ++R   L  AF  +     
Sbjct: 107 PPLLFGEKSLYRKGIRLIERKEYPSAQEVLRSYLDQYQNSPLSRPVKLFYAFSCFLNDFL 166

Query: 111 QQAASLG 117
           + A +  
Sbjct: 167 EDALASI 173


>gi|240142327|ref|YP_002966837.1| hypothetical protein MexAM1_META2p0649 [Methylobacterium extorquens
           AM1]
 gi|240012271|gb|ACS43496.1| hypothetical protein MexAM1_META2p0649 [Methylobacterium extorquens
           AM1]
          Length = 378

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 33/110 (30%), Gaps = 3/110 (2%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           K  LT+     V F  G  + +          D R       +A  + +   + +A   +
Sbjct: 50  KNPLTLTVLSTVAFAEGDLQATIDFASQAIGLDSRQSAAYANRASAYRETGRYQEALNDY 109

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           N   R  P    A + L       +    Y QA    +      P  + V
Sbjct: 110 NAALRLNP---YASRVLYQRGLTHFRMTNYDQALIDYKASAALNPRDEEV 156


>gi|225470567|ref|XP_002272662.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 346

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 9/83 (10%), Positives = 29/83 (34%), Gaps = 1/83 (1%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAF 102
             V  +        + +++       +  +S+A E+F    +   P      +  +  A 
Sbjct: 157 EKVAKEQAERRATAQLMFDLGQRAYGKGTYSRAIEFFEGALTIIPPPTLFGGEIQIWLAM 216

Query: 103 VQYSAGKYQQAASLGEEYITQYP 125
              +  ++    +L ++   ++P
Sbjct: 217 AYEANNRHADCIALYQQLERKHP 239


>gi|221112306|ref|XP_002155948.1| PREDICTED: similar to Neutrophil cytosol factor 2 [Hydra
           magnipapillata]
          Length = 568

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 30/104 (28%), Gaps = 18/104 (17%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           AV    E     A + F    ++        +               Q AA   +E I+ 
Sbjct: 13  AVSLYDEGKVENAIKSFEALEQNG-------RIKFNIGCSYLKLRDVQSAAKSFKEAISF 65

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
                 +   YY++G+   Q    V           +Y  + +E
Sbjct: 66  ---DPLMAIAYYMIGLISCQEKEYVS--------AFEYFQKAIE 98


>gi|124267183|ref|YP_001021187.1| hypothetical protein Mpe_A1994 [Methylibium petroleiphilum PM1]
 gi|124259958|gb|ABM94952.1| conserved hypothetical transmembrane protein [Methylibium
           petroleiphilum PM1]
          Length = 228

 Score = 37.8 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 25/59 (42%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++++    +   +  KA   F+     +     A ++ L++A  Q+  G+   A +  E
Sbjct: 58  LFDELDKAVIAGDTDKAARVFSDMKDRYGSTAFAGQAGLLAAKAQFEKGQNDAARASLE 116


>gi|291388028|ref|XP_002710545.1| PREDICTED: cardiac junctin [Oryctolagus cuniculus]
          Length = 786

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 17/43 (39%), Gaps = 3/43 (6%)

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
             +  T+  ++    +V +Y  SP  +  +       + LA K
Sbjct: 380 RKRGKTEEAMKAFEELVRKYPQSPRARYGKA---QCEDDLAEK 419


>gi|229529557|ref|ZP_04418947.1| GGDEF family protein [Vibrio cholerae 12129(1)]
 gi|229333331|gb|EEN98817.1| GGDEF family protein [Vibrio cholerae 12129(1)]
          Length = 519

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 72/212 (33%), Gaps = 32/212 (15%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQ-CSRDFPFAG--VARKSLLMS 100
           D+ L  + D      +Y    L +     +  A +Y N+            +  +     
Sbjct: 67  DLLLSLLPDYVDPSGIYNDVGLLMGTLGQYESALDYLNKALEYRLEQGNPLLIAQVEHSL 126

Query: 101 AFVQYSAGKYQQAASLGEEYITQY--PES--KNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
               +  G+Y+++    E+    +  P +    + YV+  +G +Y ++   V  DQ    
Sbjct: 127 GDTYFKQGRYEESILYFEQ-AKAHLTPANYLFGLAYVHLGLGKAYVELNNFVEGDQ-HLF 184

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             L+Y++          +       +      LA        +  K  +Y  AI      
Sbjct: 185 QALEYVN---------QHKDQHLQGLIYL--SLAQ-----AHF--KEQKYAQAIDYANQA 226

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           +A  S++           +AY+ LA + EA +
Sbjct: 227 VA-ISESASLPR---IKAQAYLQLAKIAEAEQ 254


>gi|126662166|ref|ZP_01733165.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [Flavobacteria bacterium BAL38]
 gi|126625545|gb|EAZ96234.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [Flavobacteria bacterium BAL38]
          Length = 642

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 48/134 (35%), Gaps = 10/134 (7%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++A    ++  +  A   + +  ++      +       A   Y    Y +A    ++ I
Sbjct: 24  KEANEVYEKLGYMNAVSIYIEVDKN---GYGSPDIYKKIADSYYFNANYIEANKWYQKLI 80

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                S+ VDY YY     YAQ ++ VP D   +   L   S++ E  + +        Y
Sbjct: 81  K---SSEIVDYEYYYR---YAQTLKTVP-DIEKSNYYLALFSKLKEADSRAKEYDDNTQY 133

Query: 182 VTVGRNQLAAKEVE 195
           +   +      E+ 
Sbjct: 134 LKQIKTDNGRYEIS 147


>gi|86605263|ref|YP_474026.1| hypothetical protein CYA_0546 [Synechococcus sp. JA-3-3Ab]
 gi|86553805|gb|ABC98763.1| putative membrane protein [Synechococcus sp. JA-3-3Ab]
          Length = 702

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 6/67 (8%), Positives = 21/67 (31%), Gaps = 19/67 (28%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK-------------SLLMSAFVQYSAG 108
           +     L++  F +A +          +   +R+             + +      +  G
Sbjct: 7   QAGREALQQGRFQEAIQLLEA------YLAQSRQRGEAGASDSQALEAQMNLVRAYHQLG 60

Query: 109 KYQQAAS 115
           + ++A +
Sbjct: 61  ETEKARA 67


>gi|282859506|ref|ZP_06268611.1| tetratricopeptide repeat protein [Prevotella bivia JCVIHMP010]
 gi|282587734|gb|EFB92934.1| tetratricopeptide repeat protein [Prevotella bivia JCVIHMP010]
          Length = 221

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 44/135 (32%), Gaps = 16/135 (11%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++A  +L  + ++ A + ++     +P       +L   A+     G+Y  A       +
Sbjct: 53  KRASWYLLLEKWNSAKDDYDLILAHYPNN---VAALFFRAYANERLGRYGFARQDYNNLL 109

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              P           +G+             +     +  ++ ++E+Y  S     AR  
Sbjct: 110 KLVPGHFEA-----QLGLILLNQKD------KHYTEAMDGINGLIEQYPTSAVAYAARAG 158

Query: 182 VTVGRNQ--LAAKEV 194
           +   R    LA  + 
Sbjct: 159 MEEERGLLTLAEYDY 173


>gi|265763037|ref|ZP_06091605.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|263255645|gb|EEZ26991.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 91

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 34/92 (36%), Gaps = 11/92 (11%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
            L +     + G  + A    EE++   P  K  D  YYL+G +Y ++           +
Sbjct: 3   QLKTIKELINQGDIENALQALEEFLQTEPVGK--DEAYYLMGNAYRKL--------GDWQ 52

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
             L +    +E   +SP    AR  V    N 
Sbjct: 53  KALNHYQSAIELNPDSP-ALQARKMVMDILNF 83


>gi|218263597|ref|ZP_03477671.1| hypothetical protein PRABACTJOHN_03360 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222607|gb|EEC95257.1| hypothetical protein PRABACTJOHN_03360 [Parabacteroides johnsonii
           DSM 18315]
          Length = 667

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 52/164 (31%), Gaps = 29/164 (17%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFL-KEQNFSKAYEYFNQCSRDFPF--AGVARKS--LL 98
            +++        Y  E Y      + K  + + A   F++  + +P       RK   LL
Sbjct: 516 EEIHAQREIQKEYAHEYYLMGNECITKAHDLNAAIRSFDKALKLYPEFVDAWVRKGVTLL 575

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
                    G   QA +   E +   P+S       Y  G SY Q+        +     
Sbjct: 576 DL-------GDGFQAVTCLNEAVRLNPKSFK---ARYNRGKSYLQL--------KYYDEA 617

Query: 159 LQYMSRIVERYTN----SPYVKGARFYVTVGRNQLAAKEVEIGR 198
           +    + V+          Y+  A  ++     +LA +  +I  
Sbjct: 618 VSDFMKAVDLKPKHAAAHEYLAEAFLHIGE--EELARQHQDIAD 659



 Score = 35.9 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 50/162 (30%), Gaps = 31/162 (19%)

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
             A +  LM       A     A    ++ +  YP  + VD  +   G++   +      
Sbjct: 527 EYAHEYYLMGNECITKAHDLNAAIRSFDKALKLYP--EFVD-AWVRKGVTLLDLGDGF-- 581

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
                   +  ++  V     S   +          N+        G+ YL+   Y  A+
Sbjct: 582 ------QAVTCLNEAVRLNPKSFKAR---------YNR--------GKSYLQLKYYDEAV 618

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
             F   +        A E    L EA++ +   + AR+   +
Sbjct: 619 SDFMKAVDLKPKHAAAHE---YLAEAFLHIGEEELARQHQDI 657


>gi|213026513|ref|ZP_03340960.1| hypothetical protein Salmonelentericaenterica_30360 [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 200

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 2/62 (3%)

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           A   + +GR Y+ RG+Y  A+   Q V+    D E   E +  L   Y  L    E  E 
Sbjct: 25  ARVSIMMGRVYMARGDYAKAVESLQRVIV--QDKELVSETLEMLQTCYQQLGKNAEWAEF 82

Query: 250 VS 251
           + 
Sbjct: 83  LR 84


>gi|195578109|ref|XP_002078908.1| GD22282 [Drosophila simulans]
 gi|194190917|gb|EDX04493.1| GD22282 [Drosophila simulans]
          Length = 1136

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 31/90 (34%), Gaps = 11/90 (12%)

Query: 109 KYQQAASLGEEYITQYPESKNVDYV-YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           +Y +A S  ++Y+     +   ++   Y +G++Y ++        R  K  ++    ++ 
Sbjct: 129 EYTEALSAYQKYLRFRENNYWTNHAFMYGIGVAYFKL--------RCFKWAIKSFQELLY 180

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
              N          + +        E  I 
Sbjct: 181 LSPNFTCANEVHLRLGLMLKHCG--EFHIA 208


>gi|220922062|ref|YP_002497363.1| TPR repeat-containing protein [Methylobacterium nodulans ORS 2060]
 gi|219946668|gb|ACL57060.1| TPR repeat-containing protein [Methylobacterium nodulans ORS 2060]
          Length = 292

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 67/220 (30%), Gaps = 39/220 (17%)

Query: 49  DSVTDVRYQREVYE-KAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQY 105
           D +         Y  +   + +  ++++A   F +  +  P   +  + ++L        
Sbjct: 61  DVIQRNPNDAAAYNTRGAAYARAGSYNEAIADFTKAIQLDPNSASAYSNRAL-----AYR 115

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
            +G+   A       I   P   +  Y    +G +  Q            +     +S+ 
Sbjct: 116 QSGRNDSALQDFTRAINADPNY-SAAY----IGRANLQ------RALGNYEAAYSDLSQA 164

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY-------------YLKRGEYVAAIPR 212
           +     S     AR    + R         IG +             Y  RG+ + A  +
Sbjct: 165 IRLTPESAEAYHAR---GLVRQAQGQHRAAIGDFDAAIDRNPFVNAPYAARGQSLIATNQ 221

Query: 213 FQLVLANYSDAEHA----EEAMARLVEAYVALALMDEARE 248
           F   + +Y+ A +      ++ A    AY       EA E
Sbjct: 222 FDKAIEDYNAALNVNNKDADSWAYRGLAYEKSGRRQEAME 261


>gi|218782714|ref|YP_002434032.1| O-antigen polymerase [Desulfatibacillum alkenivorans AK-01]
 gi|218764098|gb|ACL06564.1| O-antigen polymerase [Desulfatibacillum alkenivorans AK-01]
          Length = 762

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 27/70 (38%), Gaps = 8/70 (11%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              +L++Q   KA     +  + +P+      +LL       + G+ ++A  +  + +  
Sbjct: 593 GRAYLEKQMPEKAAPELEKVIQAYPYH---MNALLNLGVAYGTMGENEKALEVYNKVLQI 649

Query: 124 YPESKNVDYV 133
            P     DY 
Sbjct: 650 KP-----DYA 654


>gi|218778990|ref|YP_002430308.1| hypothetical protein Dalk_1137 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218760374|gb|ACL02840.1| hypothetical protein Dalk_1137 [Desulfatibacillum alkenivorans
           AK-01]
          Length = 777

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 79/219 (36%), Gaps = 33/219 (15%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS-----LLMSAFVQYS--------AG 108
           ++A  FL  + F KA + + +   DFP       +      + +AF  +         A 
Sbjct: 436 KQAKEFLAAEEFGKALDSYKKYLADFPGGSQTGAANAKIKEIENAFETFQFEGLKALDAA 495

Query: 109 KYQQAASLGEEYITQYPESKNVDYV----------YYLVGMSYAQMIRDVPYDQRATKLM 158
              Q  +   EY+  +P  ++ D V          YYL    +     ++   Q      
Sbjct: 496 DTDQRIAAYVEYLANHPNGQHKDEVSKLIWEMGDEYYL----FLNRRIELASRQENWAQA 551

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLA-AKEVEI--GRYYLKRGEYVAAIPRFQL 215
           ++Y    +  + ++   K         + +LA  K  E    +   +  +Y AA+  +  
Sbjct: 552 IEYCDSYIRIF-DNNNAKRLSREKEGFQKRLADQKAFEAVQAKASRRGTDYDAALADYSE 610

Query: 216 VLANYSDAEHAEEAMA--RLVEAYVALALMDEAREVVSL 252
            L  +      ++ +   R+++A    + +D A+  + L
Sbjct: 611 FLTLHPRTTAKDKVLEQIRMLQALKYKSRIDNAQAAMRL 649


>gi|157072494|gb|ABV08791.1| Fleer [Danio rerio]
          Length = 664

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 27/68 (39%), Gaps = 5/68 (7%)

Query: 68  LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
           +KE  +  A    ++  +       +R +L +  +  Y    +  AA   E+    +PE 
Sbjct: 32  IKEGRYGDAIHILSKEHQKH---TKSRAALSLLGYCYYHMQDFTNAAECYEQLTQLHPEV 88

Query: 128 KNVDYVYY 135
           +  DY  Y
Sbjct: 89  E--DYKLY 94


>gi|194365438|ref|YP_002028048.1| hypothetical protein Smal_1660 [Stenotrophomonas maltophilia
           R551-3]
 gi|194348242|gb|ACF51365.1| conserved hypothetical protein [Stenotrophomonas maltophilia
           R551-3]
          Length = 212

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 33/90 (36%), Gaps = 6/90 (6%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
             IA+  + GW+         D    +      Y+KA++ L++     A +         
Sbjct: 31  VVIAIGAIAGWQW-----YQKDQGGKLASANVEYQKALVGLQQNKLDDASKAVKALEA-G 84

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           P +     + L  A  Q  AGK ++A +  
Sbjct: 85  PSSIYGDLAALQLAKAQVDAGKNEEALATL 114


>gi|154173994|ref|YP_001407448.1| TPR repeat-containing protein [Campylobacter curvus 525.92]
 gi|112803214|gb|EAU00558.1| tetratricopeptide repeat domain protein [Campylobacter curvus
           525.92]
          Length = 789

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 28/68 (41%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
            +D  Y   +Y  A  +LK+   S A    +    +   +   + ++L  A   Y  GK 
Sbjct: 250 PSDENYAEVLYLIARAYLKDGIASDAKYMLDILMAEHEKSKFTKLAMLDYADYLYRFGKQ 309

Query: 111 QQAASLGE 118
           ++A  + E
Sbjct: 310 KEAMGIYE 317


>gi|39996216|ref|NP_952167.1| TPR domain protein [Geobacter sulfurreducens PCA]
 gi|39982981|gb|AAR34440.1| TPR domain protein [Geobacter sulfurreducens PCA]
          Length = 299

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/125 (12%), Positives = 40/125 (32%), Gaps = 14/125 (11%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
              + +L + +  +A E         P   +AR +      V ++  + + A     + I
Sbjct: 189 NLGLAYLGKGDLPQALETLRASVSHNPRNLIARVA---IGRVYFAMDRAEMAIQEYRKAI 245

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                 +N    +Y + +++ +    V                 +    +S   + +R Y
Sbjct: 246 EINKNYQN---AHYYLALAHVKQKDYV--------AAADAFREAIRIAPDSEKGRLSREY 294

Query: 182 VTVGR 186
           +   +
Sbjct: 295 LDSLK 299


>gi|76666842|emb|CAJ31219.1| protein containing tetratricopeptide repeat [uncultured
           sulfate-reducing bacterium]
          Length = 616

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 61/171 (35%), Gaps = 18/171 (10%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE----VYEKAVLFLKEQNFSKA 76
           K   T+ +   +C +   + +S       S  +   Q+E    ++       +   +  A
Sbjct: 460 KLRSTMLYYRGLCDIGEEKFESGLTELQASEREGPAQQEMGNVLFYSGFCLKELSRYDDA 519

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
                + +   P   +A  +LL   F  Y  G++ +A    E  I   P S  +DY    
Sbjct: 520 IPVLKRAAEFDP-GEIAVFNLL--GFCFYKTGRHAEAVGCFERAIGIDPRS-AIDYA--- 572

Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
              + A+ +R++      ++  +    + +    N  + +     +T  R+
Sbjct: 573 ---NLARNLREIGR----SEQAIAMYRKALSLDPNIGFARDQLRILTESRD 616


>gi|23011022|ref|ZP_00051516.1| COG0457: FOG: TPR repeat [Magnetospirillum magnetotacticum MS-1]
          Length = 203

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/133 (12%), Positives = 35/133 (26%), Gaps = 18/133 (13%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGK 109
           +       + ++A   +   +   A E  ++     P ++   +R++ L      +    
Sbjct: 78  SGSATADLLSDRARQAMSGNDLPLAVELMDRAVALEPNWSEGWSRRATL-----FWRLSD 132

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
              A +  +  +   P            G  Y      V          L    R    Y
Sbjct: 133 SASAIADLQRALVLEPRHFEAWAAL---GKLYLAQDDKV--------RALDAFRRAEALY 181

Query: 170 TNSPYVKGARFYV 182
                +K A   +
Sbjct: 182 PQWDMLKKAIERL 194


>gi|327272924|ref|XP_003221234.1| PREDICTED: RNA polymerase II-associated protein 3-like [Anolis
           carolinensis]
          Length = 622

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 72/243 (29%), Gaps = 67/243 (27%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           EK   + K+ N+  A E + +     P+  V        +   +   KY  A S     +
Sbjct: 138 EKGNNYFKQGNYDAAIECYTRGMNADPYNPVLPT---NRSSAFFRLKKYSVAESDCNLAL 194

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS--------- 172
                     Y     G +   + +         K   +   +++E   N+         
Sbjct: 195 ALNKNHTKA-YA--RRGAARFALEK--------FKDAKEDYEKVLELDPNNFEAKNELRK 243

Query: 173 ------------PYVKGARFYVTVGRN-------------QLAAKEVEIGRYYLKRGEYV 207
                       P    A   +   +               +A K++  G  Y K G+Y 
Sbjct: 244 IEQVLMLKENPQPDGGDASKTLDSVKEDVRQIEVEQLKQKAVAEKDL--GNGYFKEGKYE 301

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARL----VEAYVALALMDEARE--VVSLIQERYPQGY 261
           AAI         Y+    A+ A A L      AY+ +    EA E    +++        
Sbjct: 302 AAI-------ECYTRGMAADGANALLPANRAMAYLKIQKYKEAEEDCTKAVLL----DSS 350

Query: 262 WAR 264
           +++
Sbjct: 351 YSK 353


>gi|300870173|ref|YP_003785044.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000]
 gi|300687872|gb|ADK30543.1| TPR domain protein [Brachyspira pilosicoli 95/1000]
          Length = 445

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 24/184 (13%), Positives = 59/184 (32%), Gaps = 29/184 (15%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
            G  +++  +         +    +Y+  ++  +   +  A +Y +  +          +
Sbjct: 106 TGNSKKALDEYDYIIKIKNQDYDSLYKAGLISYQSGEWILAQKYLSLAATR---NDSNPE 162

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
            L M AF  Y    Y  A    E+ I    +S            S             A+
Sbjct: 163 LLYMLAFSYYKMRSYHAAQQNIEKAIAL--DS------------SNYNYHLLYGRILSAS 208

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           +     +  +   Y +S ++          ++ ++   +++   Y + G+Y  A   ++ 
Sbjct: 209 RDFQNAVKELEISY-DSSFIDN--------KDSIS---LDLANSYYELGDYDKANKYYRE 256

Query: 216 VLAN 219
           VL  
Sbjct: 257 VLTK 260


>gi|296234175|ref|XP_002762304.1| PREDICTED: serine/threonine-protein phosphatase 5 isoform 3
           [Callithrix jacchus]
          Length = 482

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 30/101 (29%), Gaps = 15/101 (14%)

Query: 104 QYSAGKYQQAASLGEEYITQYP------ESKNVDYVYYLVGMSYAQMIRDVPYD---QRA 154
            + A  Y+ A     + I   P       ++++    YL    Y   + D        + 
Sbjct: 38  YFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLA---YLRTECYGYALGDATRAIELDKK 94

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
            +  L+    +V+   +      A+         +  K  E
Sbjct: 95  FRAALRDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 132


>gi|292623167|ref|XP_001333807.3| PREDICTED: interferon-induced protein with tetratricopeptide
           repeats 1 [Danio rerio]
          Length = 435

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 46/160 (28%), Gaps = 21/160 (13%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF--NQCSRDFPFAGVARKSLLMSAF 102
               +   +  + + +Y      +K +N  +  +           P         L S F
Sbjct: 200 KTAAEIDPNDLFLQSLYVLKKSEVKGENVDEEIQSLLEKSIETRNPSG-------LSSIF 252

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY------AQMIRDVPYDQRATK 156
             Y     ++    GE     +P S  V     L  ++         M  D    +   +
Sbjct: 253 YYYRNNSTEKGFYEGERVRKHFPTSTKV-----LKIVANLHKWKVYNMKADTEQRENLAR 307

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYV-TVGRNQLAAKEVE 195
             ++    ++  Y +   VK A   +     N   A E+ 
Sbjct: 308 KSIELFEELLTHYPDHLKVKLALASLHQYAHNTEKANEIY 347


>gi|167759905|ref|ZP_02432032.1| hypothetical protein CLOSCI_02269 [Clostridium scindens ATCC 35704]
 gi|167662524|gb|EDS06654.1| hypothetical protein CLOSCI_02269 [Clostridium scindens ATCC 35704]
          Length = 458

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 24/77 (31%), Gaps = 8/77 (10%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           ++  A    +  N+  A     Q       +        ++L+ A      G   QA   
Sbjct: 360 LFATAQQNFEVANYDSAITNLEQVMKMDEGYNDGA----AMLLLAQSYEKKGDQDQANVK 415

Query: 117 GEEYITQYPESKNVDYV 133
            ++ I  YP S N    
Sbjct: 416 YQKIIESYP-STNAAEA 431


>gi|158339577|ref|YP_001520966.1| TPR domain-containing protein [Acaryochloris marina MBIC11017]
 gi|158309818|gb|ABW31434.1| TPR domain protein [Acaryochloris marina MBIC11017]
          Length = 161

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 4/75 (5%)

Query: 58  REVYE-KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
            E Y  + VLF+ E+NF +A E F Q +R  P +  A    L  A  Q     YQ A   
Sbjct: 76  SEAYALRGVLFMGEKNFQEAAEDFAQVTRLQPKSAEAH---LNLAKSQLMLKDYQAALQS 132

Query: 117 GEEYITQYPESKNVD 131
             +     P++++  
Sbjct: 133 ATKATQLDPQNQSAA 147


>gi|157785658|ref|NP_001098119.2| tetratricopeptide repeat protein 30A [Danio rerio]
 gi|189037062|sp|A7YE96|TT30A_DANRE RecName: Full=Tetratricopeptide repeat protein 30A; Short=TPR
           repeat protein 30A; AltName: Full=Protein fleer
 gi|190337780|gb|AAI63912.1| Fleer [Danio rerio]
          Length = 651

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 27/68 (39%), Gaps = 5/68 (7%)

Query: 68  LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
           +KE  +  A    ++  +       +R +L +  +  Y    +  AA   E+    +PE 
Sbjct: 19  IKEGRYGDAIHILSKEHQKH---TKSRAALSLLGYCYYHMQDFTNAAECYEQLTQLHPEV 75

Query: 128 KNVDYVYY 135
           +  DY  Y
Sbjct: 76  E--DYKLY 81


>gi|42527650|ref|NP_972748.1| putative lipoprotein [Treponema denticola ATCC 35405]
 gi|41818478|gb|AAS12667.1| lipoprotein, putative [Treponema denticola ATCC 35405]
          Length = 153

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 39/102 (38%), Gaps = 7/102 (6%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            +  + A+  L       + +    ++T +    E+ ++A   L   +   A EY+    
Sbjct: 14  LLILTAAISLLFSCSSLPTDETVPANLTPI----ELNQRAQAELDNGSLRNALEYYKIVI 69

Query: 85  RDFPFAGVARK--SLLMSAFVQYSAGKYQQAASLGEEYITQY 124
           + +     + +  +    A +  S  K+ +A  + +  I +Y
Sbjct: 70  KRY-GTDASTRTAAEYEIAHIYISQKKWLEADDMLKAIIDRY 110


>gi|67920757|ref|ZP_00514276.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
 gi|67856874|gb|EAM52114.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
          Length = 295

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 5/62 (8%), Positives = 20/62 (32%), Gaps = 9/62 (14%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +     + ++  + +A     +      D P       +        +  G+  +A ++ 
Sbjct: 125 FTLGNAYFQQGKYQQAATALEEGLEIKADVP------SAQFDLGNAYFKLGRMAEAIAVY 178

Query: 118 EE 119
           ++
Sbjct: 179 QK 180


>gi|330446673|ref|ZP_08310325.1| type IV pilus biogenesis/stability protein PilW [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328490864|dbj|GAA04822.1| type IV pilus biogenesis/stability protein PilW [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 252

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 35/263 (13%), Positives = 78/263 (29%), Gaps = 53/263 (20%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
           +++  ++     G       D   +       +  +    + +LK+  + +A E      
Sbjct: 5   SVYPLLSCLLFTGCATVEVADNGREFDPKAASEARL-NLGLNYLKDGQWERARENLELAL 63

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV-------------- 130
           +  P    A+ ++   A+     G    A  + ++ +   P++ +V              
Sbjct: 64  KYDPTYYRAQNAM---AYYYQKVGDKDAAEKMYKQALRYSPKNGDVLNNYGVFLCSEGRY 120

Query: 131 -------------DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
                         Y YYL+  SY          Q   +    Y    +    N P    
Sbjct: 121 DEAIAAFVRAIEQPY-YYLISASYENAGL-CSRKQGNLEAATGYFENALAHDPNRPRSM- 177

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
                     QLA  E+E   +   R            +        +  +++  L++  
Sbjct: 178 ---------LQLAQVEIETNNFKDAR----------VQLFKFNKRYGYTADSLWLLIQLE 218

Query: 238 VALALMDEAREVVSLIQERYPQG 260
                + +A +   L++E+YP  
Sbjct: 219 KQAGRLTQANKYAILLKEKYPDS 241


>gi|319954563|ref|YP_004165830.1| tetratricopeptide tpr_1 repeat-containing protein [Cellulophaga
           algicola DSM 14237]
 gi|319423223|gb|ADV50332.1| Tetratricopeptide TPR_1 repeat-containing protein [Cellulophaga
           algicola DSM 14237]
          Length = 710

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 82/230 (35%), Gaps = 43/230 (18%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAG--KYQQAASL 116
           Y +   FL ++ +S+A   + +   + P  F  V         +    +   KY +A  +
Sbjct: 114 YNE--SFLWDKKYSEAEPLYEELVSENPENFGAV-------LGYANTLSNLKKYSKALVM 164

Query: 117 GEEYITQYPESKNV---------DYV-------YYLVGMSYAQMIRDVPYDQRATKLMLQ 160
               I   PE+ +           Y         Y  G++Y   I     + R   L L 
Sbjct: 165 VNRAIALQPENVSAKVSRKYMKLGYANSYVNNQEYQKGINYLNEIFTDFPEDRDALLNLA 224

Query: 161 YMSRIVERYTNSPYVKGARFYVTV-------GRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
            +  I++    +   K     + +         N +A  E  IG     +     AI   
Sbjct: 225 NVYLIIK---ETEKAKNIYTRLAISPKDSITALNGIALAE-HIGE--NDKEALRVAIQ-A 277

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
           +  +    D +  E+   R V+A +      +A+E ++L+++RYP+  W 
Sbjct: 278 KEKVNAIDDTKLKEQTYDRYVQALIWNNKYGKAKEEIALLEKRYPEKNWF 327


>gi|294674568|ref|YP_003575184.1| hypothetical protein PRU_1900 [Prevotella ruminicola 23]
 gi|294474115|gb|ADE83504.1| tetratricopeptide repeat protein [Prevotella ruminicola 23]
          Length = 939

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 31/80 (38%), Gaps = 14/80 (17%)

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
            + ++++    + I   YL+R            +  +Y D E+  EA   L   Y     
Sbjct: 569 IILKDKMER--LNISERYLRR------------LTTDYPDYENNPEAWYHLWLLYSRQGR 614

Query: 243 MDEAREVVSLIQERYPQGYW 262
             EA E ++ ++  YP   +
Sbjct: 615 TTEAAECLARLKADYPDNEY 634


>gi|293416975|ref|ZP_06659612.1| cellulose synthase operon protein C [Escherichia coli B185]
 gi|291431551|gb|EFF04536.1| cellulose synthase operon protein C [Escherichia coli B185]
          Length = 1157

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 78/236 (33%), Gaps = 36/236 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197
             Q +       +  +V R   S  V      +   G+   A             ++ + 
Sbjct: 557 RAQWS-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 611 DWAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKSAARSQLAKL 663



 Score = 35.9 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + ++ P      Y   L
Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537


>gi|255009403|ref|ZP_05281529.1| aerotolerance-related exported protein [Bacteroides fragilis
           3_1_12]
 gi|313147162|ref|ZP_07809355.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313135929|gb|EFR53289.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 278

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/122 (12%), Positives = 37/122 (30%), Gaps = 11/122 (9%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSV-------TDVRYQREVYEKAVLFL 68
             ++  F L +  ++           S++ +  DSV       +  + +     +     
Sbjct: 1   MKKILFFTLGLLVAVTSFGQDSLVTDSTQRMEGDSVNIRNTEFSSSKLEDATKSEGDSAY 60

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
              +F+ A + +    R     G A           Y   +  +A    E  +   P + 
Sbjct: 61  IRNDFASAIQIYESLLRK----GDAADVYYNLGNSYYKVNEIAKAILNYERALLLQPGNG 116

Query: 129 NV 130
           ++
Sbjct: 117 DI 118


>gi|188587830|ref|YP_001919724.1| TPR-repeat-containing protein [Clostridium botulinum E3 str. Alaska
           E43]
 gi|188498111|gb|ACD51247.1| TPR-repeat-containing protein [Clostridium botulinum E3 str. Alaska
           E43]
          Length = 423

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 45/122 (36%), Gaps = 9/122 (7%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y K +     QN+ KA   F++       + +    +   A        + +A  L E Y
Sbjct: 308 YGKGMEEFNIQNYEKANIEFSKAYDYSEGSYLKEHIIFYKAVTLEQLNNFDEAIKLYELY 367

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
            ++YP+    D V Y + + +    R         +  + Y +++ + ++ S Y      
Sbjct: 368 YSEYPKGSYADNVLYNLSLMFNNTDR---------EKSIYYANKLRDDFSESIYFNETIN 418

Query: 181 YV 182
            +
Sbjct: 419 KI 420


>gi|149921623|ref|ZP_01910073.1| putative disulphide-isomerase [Plesiocystis pacifica SIR-1]
 gi|149817575|gb|EDM77044.1| putative disulphide-isomerase [Plesiocystis pacifica SIR-1]
          Length = 408

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/89 (14%), Positives = 30/89 (33%), Gaps = 8/89 (8%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN--VDYVYYLVGMSYAQMIRDVPYDQR 153
           +    A     A K +++ +L +E +   P+++      V Y   +        +  D  
Sbjct: 207 ARYRLANAYVLAAKREESKALFDELLAADPDNEAGVAAQVLYDRAL-----FSTLKLDGD 261

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYV 182
             +  +     +  RY  S   + A   +
Sbjct: 262 PAR-AIAEFQALQARYPESKQARSAYRMI 289


>gi|145345359|ref|XP_001417181.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577408|gb|ABO95474.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 1059

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 22/58 (37%), Gaps = 1/58 (1%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
              +  +  ++L +  + +A + + +    F F       +L  A   Y  G  ++A 
Sbjct: 722 PDILINQGHVYLAKAQYVQASKLYERAQSQFYFNQ-NENVMLYQARAHYENGNLEEAR 778


>gi|156740280|ref|YP_001430409.1| heat shock protein DnaJ domain-containing protein [Roseiflexus
           castenholzii DSM 13941]
 gi|156231608|gb|ABU56391.1| heat shock protein DnaJ domain protein [Roseiflexus castenholzii
           DSM 13941]
          Length = 451

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 19/49 (38%), Gaps = 3/49 (6%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
            +Q E+Y++A   L    F +A     Q  R  PF      + L  A  
Sbjct: 104 DHQAELYQQARDHLDAGRFVQAIAALRQLHRINPF--YRDSAEL-LADA 149


>gi|117306667|gb|AAI26581.1| DnaJ (Hsp40) homolog, subfamily C, member 3 [Bos taurus]
          Length = 504

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 39/114 (34%), Gaps = 4/114 (3%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKYQQAASL 116
            ++ E A   +KE  ++ A   +    +  P       +S            K  +A  +
Sbjct: 269 NKLIESAEELIKEGRYTDAISKYESVMKTEPGVHEYTIRSKERICHCFSKDEKPVEAIRV 328

Query: 117 GEEYITQYPESKNV--DYVY-YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
             E +   P++ N   D    YL+   Y + I+D    Q   +   Q    + +
Sbjct: 329 CSEVLQVEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQQIREGLEK 382


>gi|114686935|ref|XP_515200.2| PREDICTED: similar to FLJ20699 protein isoform 3 [Pan troglodytes]
 gi|114686937|ref|XP_001137018.1| PREDICTED: similar to FLJ20699 protein isoform 1 [Pan troglodytes]
          Length = 404

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 45/150 (30%), Gaps = 29/150 (19%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQ----------REVYEKAVLFLKEQNFSKAYE 78
                 L+G       D  LD       +           +++  AV      NF KA E
Sbjct: 5   IATGLVLIGTGSSVKLDKELDLAVKTMVEISRTQPLTRREQLHVSAVETFANGNFPKACE 64

Query: 79  YFNQCSRDFPFAGVARKSLLMSA-----FVQYSAGKYQQAASLGEEYITQYPE-SKNVDY 132
            + Q  +D P          M A        +  G  +Q           YP  + ++  
Sbjct: 65  LWEQILQDHPTD--------MLALKFSHDAYFYLGYQEQMRDSVAR---IYPFWTPDIPL 113

Query: 133 VYYLVGMSYAQMIRDVPYDQ--RATKLMLQ 160
             Y+ G+    ++    YD+  +  K  L 
Sbjct: 114 SSYVKGIYSFGLMETNFYDRAEKLAKEALS 143


>gi|254784361|ref|YP_003071789.1| tetratricopeptide repeat domain-containing protein [Teredinibacter
           turnerae T7901]
 gi|237687029|gb|ACR14293.1| tetratricopeptide repeat domain protein [Teredinibacter turnerae
           T7901]
          Length = 733

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 60/153 (39%), Gaps = 31/153 (20%)

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
            A +   +G+Y QA  L ++ + + P++        L+ ++Y        +D+  +   +
Sbjct: 436 MAEIHRQSGEYDQAIQLIDQVLAREPDNTPAAR---LLALTY--------HDKNESAKGV 484

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
           + +   ++R+                ++ +  K++   R YL  G    AI  ++ VL  
Sbjct: 485 RILEDCIQRHP---------------KDFVNYKDL--ARIYLDNGNLEKAITNYKKVLEI 527

Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
                    A+  L  +Y  L  + +AR+   L
Sbjct: 528 ---TPQNNAALNNLGISYYFLGELKQARKYFEL 557


>gi|218258388|ref|ZP_03474780.1| hypothetical protein PRABACTJOHN_00435 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225515|gb|EEC98165.1| hypothetical protein PRABACTJOHN_00435 [Parabacteroides johnsonii
           DSM 18315]
          Length = 1223

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 53/176 (30%), Gaps = 24/176 (13%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
                  A    EE   ++P+  ++   YY V   Y   +R        T       +++
Sbjct: 627 KLEDIPLATEAFEELERRFPKHSHLLESYYQV---YLMALRSGDQVLATTYK-----NKL 678

Query: 166 VERYTNSPYVKGAR--------FYVTVGRNQL--AAKEVEIGRYYLKRGEYVAAIPRFQL 215
           V  +  S Y               +   ++ +  A     +        + V     ++ 
Sbjct: 679 VTTFPESDYAIAIADPNYEYNIRMMDKVQDSIYQATYASYLA------EDTVTVRRNYRD 732

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           V A Y  A+   + M      YV     +  +  +  + E+YP          ++K
Sbjct: 733 VSAKYPLADLLPKFMFLEALTYVQAGDAEGFKNALKALVEKYPTADVTELAGEMLK 788


>gi|158333312|ref|YP_001514484.1| hypothetical protein AM1_0082 [Acaryochloris marina MBIC11017]
 gi|158303553|gb|ABW25170.1| TPR repeat-containing protein [Acaryochloris marina MBIC11017]
          Length = 171

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 32/93 (34%), Gaps = 14/93 (15%)

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
            G Y  A    ++ +   P +     VYY  G++Y      +   Q      L+  S+ +
Sbjct: 63  NGDYVHAIQDYDQALQLAPSNSE---VYYNRGVAYF----SINRPQS----ALRDFSQAI 111

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
               N   +  A     + R  L  ++  I  Y
Sbjct: 112 ALQPN---MAEAYGNRGLIRQTLGDRKGAIADY 141


>gi|146329307|ref|YP_001210054.1| lipoprotein [Dichelobacter nodosus VCS1703A]
 gi|146232777|gb|ABQ13755.1| conserved hypothetical lipoprotein [Dichelobacter nodosus VCS1703A]
          Length = 185

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 25/81 (30%), Gaps = 8/81 (9%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y AG  + A      Y+      +      Y +G +Y          QR  K  ++Y+  
Sbjct: 91  YRAGDVEAAVKAFRAYLDGGARDEKAVMAQYWLGDAYYS--------QRNFKEAVRYLGT 142

Query: 165 IVERYTNSPYVKGARFYVTVG 185
            ++    S     A   +   
Sbjct: 143 FLKNKPQSEKTAPALKKLIYA 163



 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 11/74 (14%), Positives = 23/74 (31%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           YE A+   +  +   A + F            A  +        YS   +++A      +
Sbjct: 84  YEDALNLYRAGDVEAAVKAFRAYLDGGARDEKAVMAQYWLGDAYYSQRNFKEAVRYLGTF 143

Query: 121 ITQYPESKNVDYVY 134
           +   P+S+      
Sbjct: 144 LKNKPQSEKTAPAL 157


>gi|27777563|gb|AAN10246.1| transcriptional regulator [Streptomyces viridifaciens]
          Length = 329

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 9/51 (17%), Positives = 18/51 (35%), Gaps = 3/51 (5%)

Query: 67  FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            L +  + +A     +     P+     +  LM     Y AG+  +A  + 
Sbjct: 226 QLDDGQYDRAIPELRKLLITHPYQERLHQ-QLMV--ALYRAGRQTEALQVY 273


>gi|319794356|ref|YP_004155996.1| hypothetical protein Varpa_3701 [Variovorax paradoxus EPS]
 gi|315596819|gb|ADU37885.1| Protein of unknown function DUF2133 [Variovorax paradoxus EPS]
          Length = 230

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 8/61 (13%), Positives = 23/61 (37%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
              +Y++     +  +  +           F     A+++ L++A   Y  GK +++ + 
Sbjct: 55  AAALYDEVERSTQSGDVERIQRVLGDMKERFAGTAYAQQAGLLAAKTLYEKGKVEESRAA 114

Query: 117 G 117
            
Sbjct: 115 L 115


>gi|157964297|ref|YP_001499121.1| hypothetical protein RMA_0318 [Rickettsia massiliae MTU5]
 gi|157844073|gb|ABV84574.1| hypothetical protein RMA_0318 [Rickettsia massiliae MTU5]
          Length = 250

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 18/46 (39%)

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
             A   Y   K  +A    + +I +YP S  +   Y+  G  + + 
Sbjct: 127 DLALAAYKDNKLTEAKDKFKNFIQKYPNSSLISNAYFWYGECFFKQ 172



 Score = 35.5 bits (81), Expect = 8.1,   Method: Composition-based stats.
 Identities = 16/135 (11%), Positives = 45/135 (33%), Gaps = 16/135 (11%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D+   ++ Y+ A+   K+   ++A + F    + +P + +   +        +    Y  
Sbjct: 118 DIAPDKQAYDLALAAYKDNKLTEAKDKFKNFIQKYPNSSLISNAYFWYGECFFKQKDYNG 177

Query: 113 AASLGEEYITQY---PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           AA     Y+  Y   P+          + +S  ++        + T+     +++    +
Sbjct: 178 AAVN---YLKGYKESPKGAKSSDGLLKLALSLGEL--------KKTQEACNMLAKFDNEF 226

Query: 170 TNSPYVKGARFYVTV 184
             +     A   +  
Sbjct: 227 PTNR--TAASKKMAE 239


>gi|145525386|ref|XP_001448515.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124416059|emb|CAK81118.1| unnamed protein product [Paramecium tetraurelia]
          Length = 539

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 66/219 (30%), Gaps = 29/219 (13%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            + KA+   K   + +A + ++Q  +  P            A          +A    + 
Sbjct: 249 YFNKAITLNKMNRYEEALKNYDQAIQKDPENSYYYNGK---ADTLQKMNSLDEALENYDL 305

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT-NSPY---V 175
            I + PE+             Y     D        +  L+     +++   NS Y    
Sbjct: 306 AIQKNPENSY-----------YYNGKADTLQKMNRFEEALENYDSAIQKNPENSDYYNGK 354

Query: 176 KGARFYVTVGRNQLAAKEVEI------GRYYLKRGEYVAAIPRFQLVLANYSDA--EHAE 227
                 +      L   +  I       RYY  +   +  + RF+  + NY  A  ++ E
Sbjct: 355 ADTLQKMNRFEEALENYDSAIQKNPEDSRYYFNKAITLNNMNRFEEAVENYDSAIQKNPE 414

Query: 228 EAMARLVEA--YVALALMDEA-REVVSLIQERYPQGYWA 263
           ++     +A     +   +EA     S  Q+      + 
Sbjct: 415 DSRYYFNKAITLNNMNRFEEALNNYDSATQKNPENSDYY 453


>gi|116496629|gb|AAI26171.1| Prolyl 4-hydroxylase, alpha polypeptide III [Homo sapiens]
          Length = 544

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 28/80 (35%), Gaps = 9/80 (11%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDF--PFAGVA-------RKSLLMSAFVQYSAGKYQ 111
           ++   +     ++  A  +  +    F   +             +L   AF  + AG   
Sbjct: 185 FQVGKVAYDMGDYYHAIPWLEEAVSLFRGSYGEWKTEDEASLEDALDHLAFAYFRAGNVS 244

Query: 112 QAASLGEEYITQYPESKNVD 131
            A SL  E++   P++K + 
Sbjct: 245 CALSLSREFLLYSPDNKRMA 264


>gi|33589818|ref|NP_878907.1| prolyl 4-hydroxylase subunit alpha-3 precursor [Homo sapiens]
 gi|114639354|ref|XP_001174896.1| PREDICTED: prolyl 4-hydroxylase subunit alpha-3 [Pan troglodytes]
 gi|74738714|sp|Q7Z4N8|P4HA3_HUMAN RecName: Full=Prolyl 4-hydroxylase subunit alpha-3; Short=4-PH
           alpha-3; AltName:
           Full=Procollagen-proline,2-oxoglutarate-4-dioxygenase
           subunit alpha-3; Flags: Precursor
 gi|33188232|gb|AAP97874.1| prolyl 4-hydroxylase alpha III subunit [Homo sapiens]
 gi|36962719|gb|AAQ87603.1| collagen prolyl 4-hydroxylase alpha III subunit [Homo sapiens]
 gi|37182165|gb|AAQ88885.1| GPGA711 [Homo sapiens]
 gi|109658570|gb|AAI17334.1| Prolyl 4-hydroxylase, alpha polypeptide III [Homo sapiens]
 gi|119595341|gb|EAW74935.1| procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline
           4-hydroxylase), alpha polypeptide III, isoform CRA_b
           [Homo sapiens]
          Length = 544

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 28/80 (35%), Gaps = 9/80 (11%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDF--PFAGVA-------RKSLLMSAFVQYSAGKYQ 111
           ++   +     ++  A  +  +    F   +             +L   AF  + AG   
Sbjct: 185 FQVGKVAYDMGDYYHAIPWLEEAVSLFRGSYGEWKTEDEASLEDALDHLAFAYFRAGNVS 244

Query: 112 QAASLGEEYITQYPESKNVD 131
            A SL  E++   P++K + 
Sbjct: 245 CALSLSREFLLYSPDNKRMA 264


>gi|307718424|ref|YP_003873956.1| cyclic nucleotide-binding protein [Spirochaeta thermophila DSM
           6192]
 gi|306532149|gb|ADN01683.1| cyclic nucleotide-binding protein [Spirochaeta thermophila DSM
           6192]
          Length = 325

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/138 (14%), Positives = 49/138 (35%), Gaps = 4/138 (2%)

Query: 5   LGRAICIFEAWAY-QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63
           LGR +  +    + +  K ALT   +       G     S +      +    +++ Y +
Sbjct: 150 LGRYLAYYPDGVHVEEVKAALTRVQAAQARGGTGALSIPSPE--PRKPSLSSAEKDFY-E 206

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A     ++ + +A   F + +       V R++L  S     +  +Y +       +   
Sbjct: 207 AESLFGQERYEEALASFTRIAEGSDQEDVRRRALFESGRCLMAMARYDEVIQHYSRFARD 266

Query: 124 YPESKNVDYVYYLVGMSY 141
           + ++       +L+  +Y
Sbjct: 267 FSDAPETSEALFLIARAY 284


>gi|297672763|ref|XP_002814458.1| PREDICTED: LOW QUALITY PROTEIN: prolyl 3-hydroxylase 2-like [Pongo
           abelii]
          Length = 406

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 6/68 (8%)

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           F  Y  G+Y +A    + Y+  +P+ ++V     L  + Y + + D   D  A+    + 
Sbjct: 310 FAYYRVGEYVKALECAKAYLLCHPDDEDV-----LDNVDYYESLLDDSIDP-ASIEARED 363

Query: 162 MSRIVERY 169
           ++  V+R+
Sbjct: 364 LTMFVKRH 371


>gi|298252154|ref|ZP_06975957.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297546746|gb|EFH80614.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 956

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 40/105 (38%), Gaps = 18/105 (17%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           +K  +  + + + +A + F + +     +  A KS        Y  G+Y++A  + E+ I
Sbjct: 724 DKGDVLYEMRRYQEALDAFEKAAEL--GSQDA-KSYRDRGDALYELGRYREALEMYEQLI 780

Query: 122 TQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
              P      Y   YY  G++ + + R         +  L    +
Sbjct: 781 RLSPS-----YATGYYNKGLALSALGRH--------QEALDAFEQ 812


>gi|294055224|ref|YP_003548882.1| TPR repeat protein [Coraliomargarita akajimensis DSM 45221]
 gi|293614557|gb|ADE54712.1| TPR repeat protein [Coraliomargarita akajimensis DSM 45221]
          Length = 221

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 28/83 (33%), Gaps = 17/83 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGK---------- 109
           ++  L+ +  ++ +A  +F        F+  A +  +     F QY   +          
Sbjct: 43  QQGQLWFRAGDYERAARHFENPRWRG-FSLYAGQDFISAERYFAQYQDAESLLARANALA 101

Query: 110 ----YQQAASLGEEYITQYPESK 128
               Y +A     E   +YP+  
Sbjct: 102 HQTNYAEAKHAYAEMARRYPDHP 124


>gi|254295283|ref|YP_003061306.1| hypothetical protein Hbal_2940 [Hirschia baltica ATCC 49814]
 gi|254043814|gb|ACT60609.1| TPR repeat-containing protein [Hirschia baltica ATCC 49814]
          Length = 185

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 41/134 (30%), Gaps = 29/134 (21%)

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
                S      A  + +  I   P   ++   +Y  G+ +     D  YDQ      + 
Sbjct: 73  IDAH-SQDNLALARDMFDRVILIEP---DIAEAWYRRGVVFYL---DGKYDQ-----AIL 120

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
              + +E              +                    R    AA+  ++ VL  +
Sbjct: 121 DFEQALELEPRHFEAWLGLAAIFEAVEH--------------RE---AALNAYRQVLKLF 163

Query: 221 SDAEHAEEAMARLV 234
             + HA++++ARL 
Sbjct: 164 PHSRHAKQSVARLE 177


>gi|242620023|ref|YP_003002027.1| conserved hypothetical plastid protein Ycf37 [Aureococcus
           anophagefferens]
 gi|239997268|gb|ACS36791.1| conserved hypothetical plastid protein Ycf37 [Aureococcus
           anophagefferens]
          Length = 174

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 51/142 (35%), Gaps = 23/142 (16%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA------- 101
              TD      +++   L+L+++ ++KA E F  C     F    +   L  A       
Sbjct: 44  KKTTDKNTYENLFKLGQLYLRKKIYNKAIEEFRAC-----FKTWDKNDKLGIASLFNTLG 98

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           F  Y   +Y  A    +  +T  P     DYV  L  ++Y          Q  T  +   
Sbjct: 99  FTYYQLKEYDIAVYYYKIALTVTP-----DYVTSLTNLAYLYQS------QNQTSELQSV 147

Query: 162 MSRIVERYTNSPYVKGARFYVT 183
            S+++    +S   +  + Y+ 
Sbjct: 148 YSKLILFEPDSKKTRDIQEYLA 169


>gi|255033902|ref|YP_003084523.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
           18053]
 gi|254946658|gb|ACT91358.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
          Length = 638

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 58/181 (32%), Gaps = 31/181 (17%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +++  L  F       +   +  S++DV L      R  R+VY+KA    +E+   +A E
Sbjct: 1   MHRIILFCF----ALGIFTLQSVSAQDVTL-----SRTARQVYDKAQKAWQERKLPEATE 51

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            F +     P +       L  A V     K         + +   P++      +  +G
Sbjct: 52  LFEKVLEMEPNSYDTH---LRLAQVYELQRKPDLTRKHYHKAVALRPDAPQSAPAFQWIG 108

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
             +    R              Y  + +  +        A+  +     +LA K     +
Sbjct: 109 RDHFNAQRYDS--------AQFYFEKALPLFP-------AKSSL----GRLAEKSAASAK 149

Query: 199 Y 199
           +
Sbjct: 150 F 150


>gi|194289640|ref|YP_002005547.1| hypothetical protein RALTA_A1532 [Cupriavidus taiwanensis LMG
           19424]
 gi|193223475|emb|CAQ69480.1| conserved hypothetical protein, Tetratricopeptide TPR_4 motif;
           putative membrane protein [Cupriavidus taiwanensis LMG
           19424]
          Length = 553

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 31/85 (36%), Gaps = 15/85 (17%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQC----SRDFPFAGVARKSL----LMSAFVQY-------S 106
           ++     ++ +F++A   F+         +     A+       + SA   Y        
Sbjct: 378 QQGRRAFEQGDFARAATLFDDPMWRGIAQYRAGQYAQAVQSFARVDSAQADYNQGNALAR 437

Query: 107 AGKYQQAASLGEEYITQYPESKNVD 131
            G+YQQAA+   + + + P+     
Sbjct: 438 QGQYQQAAARYRQALRRQPQWPAAA 462


>gi|15384006|gb|AAK96084.1|AF393466_21 TPR-repeat protein [uncultured crenarchaeote 74A4]
          Length = 163

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 44/157 (28%), Gaps = 44/157 (28%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFP------------FAGVAR------------- 94
           +  KA   L   N  +A  ++ +     P            F    +             
Sbjct: 7   LLNKAQTSLNLGNPKEALSFYQKILEQDPKHLTALLKKGNIFGKFGKFNDAIMCYDGVIL 66

Query: 95  ------KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
                  +LL      +  G+Y  A    +  +    ++K      Y    S  +     
Sbjct: 67  QEKENILALLNKGLCYHKIGQYDVAIECFDIVLKLKSQNKT---ALYNKASSIIKS---- 119

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
                  K  L  +S++VE   +S Y + A+  +   
Sbjct: 120 ----GKLKEGLAVLSQLVEL--DSSYKQQAKCDIDFV 150


>gi|15894349|ref|NP_347698.1| TPR repeat-containing protein [Clostridium acetobutylicum ATCC 824]
 gi|15023976|gb|AAK79038.1|AE007621_12 TPR-repeat-containing protein [Clostridium acetobutylicum ATCC 824]
 gi|325508477|gb|ADZ20113.1| TPR-repeat-containing protein [Clostridium acetobutylicum EA 2018]
          Length = 359

 Score = 37.8 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 21/137 (15%), Positives = 48/137 (35%), Gaps = 19/137 (13%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFV 103
           +   D +T    ++++ E A      ++F KA   +      D+ ++G         A+ 
Sbjct: 129 EERGDDLTVTNKEKKMLELADKKFNNKDFDKAISIYKEMIKNDYYYSGW---VYSSIAYC 185

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYL-VGMSYAQMIRDVPYDQRATKLMLQYM 162
                 Y +A    ++ +       N D V Y+  G +   + +         K  ++  
Sbjct: 186 YDCLENYNEALVYYDKALKN-----NKDSVIYMNKGFALQSLEKH--------KEAIENF 232

Query: 163 SRIVERYTNSP-YVKGA 178
            + ++   +   YV  A
Sbjct: 233 DKSIKIKPSKEAYVFKA 249


>gi|301053723|ref|YP_003791934.1| TPR repeat-containing protein [Bacillus anthracis CI]
 gi|300375892|gb|ADK04796.1| TPR repeat-containing protein [Bacillus cereus biovar anthracis
           str. CI]
          Length = 891

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 51/158 (32%), Gaps = 17/158 (10%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAF 102
            +  D   D       Y  A    +   + +A + F Q   +         + ++   A 
Sbjct: 591 KLIKDREIDKENNEAAYLLASANFRIGKYQEAVQNFEQALANNAKGIEPYKKDAMRDLAV 650

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
                 ++++A  +  +  T+   +++   V YL G      ++         +    + 
Sbjct: 651 SHMKMKEFEKAEDVIVKMSTK--TNEDKAIVSYLKGQLSTATVQ--------LEKAESFF 700

Query: 163 SRIV-ERYTNSPYVKG-ARFYVTVGRNQL---AAKEVE 195
              + +   NS Y    +  YV   +  L   A KE+ 
Sbjct: 701 KEAIMQDSKNSIYTIELSNLYVLWNKTNLIDSAKKEMN 738


>gi|258564825|ref|XP_002583157.1| mitochondrial protein import receptor [Uncinocarpus reesii 1704]
 gi|237906858|gb|EEP81259.1| mitochondrial protein import receptor [Uncinocarpus reesii 1704]
          Length = 632

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 46/135 (34%), Gaps = 20/135 (14%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGV 92
           +G    ++ +  L    +       Y +A L       ++A + + +     RDF ++  
Sbjct: 392 MGNREAAADNFDLALAQNKDDPDIYYHRAQLHFILGELAEAAKDYQKSIDLDRDFIYSH- 450

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
                +     QY  G    A +     +  +   ++V  VY            ++  DQ
Sbjct: 451 -----IQLGVAQYKMGSVASAMATFRRTLKNF---EDVADVY--------NYYGELLLDQ 494

Query: 153 RATKLMLQYMSRIVE 167
           +  +  ++   R VE
Sbjct: 495 QKFEEAIEKFDRAVE 509


>gi|225714516|gb|ACO13104.1| FK506-binding protein 4 [Lepeophtheirus salmonis]
          Length = 428

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 34/86 (39%), Gaps = 6/86 (6%)

Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
                 +      L   E+ I   YLK  E++ A  R    +++  D+    +A  R  E
Sbjct: 294 DDGNTELEELSKSL---ELNIIMCYLKMKEWLEAKNRCDTFISSNKDS---AKAFFRRGE 347

Query: 236 AYVALALMDEAREVVSLIQERYPQGY 261
           A + L+    A++   ++ E  P+  
Sbjct: 348 ALMGLSDPALAKKDFKMVVELEPENK 373


>gi|157266760|gb|ABV26099.1| fleer splice variant 1 [Danio rerio]
          Length = 556

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 27/68 (39%), Gaps = 5/68 (7%)

Query: 68  LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
           +KE  +  A    ++  +       +R +L +  +  Y    +  AA   E+    +PE 
Sbjct: 19  IKEGRYGDAIHILSKEHQKH---TKSRAALSLLGYCYYHMQDFTNAAECYEQLTQLHPEV 75

Query: 128 KNVDYVYY 135
           +  DY  Y
Sbjct: 76  E--DYKLY 81


>gi|149919653|ref|ZP_01908132.1| hypothetical protein PPSIR1_07268 [Plesiocystis pacifica SIR-1]
 gi|149819596|gb|EDM79024.1| hypothetical protein PPSIR1_07268 [Plesiocystis pacifica SIR-1]
          Length = 276

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 34/88 (38%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
            ++ +          +  + ++   A   LK  +  KA    +  ++ FP   +A +  L
Sbjct: 171 AKKGTEAEPAKGADSLAVEMQLLGAARSALKAGDVKKALTKLDAHAQRFPRGALATEREL 230

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPE 126
                  +AG+  +A ++   +I   P+
Sbjct: 231 TRVTALCAAGRSDEAETVARRFIATRPQ 258


>gi|91774854|ref|YP_544610.1| tetratricopeptide TPR_2 [Methylobacillus flagellatus KT]
 gi|91708841|gb|ABE48769.1| Tetratricopeptide TPR_2 [Methylobacillus flagellatus KT]
          Length = 345

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 42/115 (36%), Gaps = 11/115 (9%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAAS 115
           + ++ K VL  +     +A + F++ +  +P   A     ++L   +     G Y++A  
Sbjct: 58  KALFLKGVLLAESDKQDEAIQVFSELTEKYPQLPAPYNNLAVL---YAY--QGNYEKAKG 112

Query: 116 LGEEYITQYP----ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
             E  I  +P      +N+  +Y  +          +       K  L  +  ++
Sbjct: 113 ALEAAIRTHPSYATAHENLGDIYARMASESYSRALQLDTSNSRAKSKLALIKDLL 167


>gi|325105362|ref|YP_004275016.1| Tetratricopeptide TPR_1 repeat-containing protein [Pedobacter
           saltans DSM 12145]
 gi|324974210|gb|ADY53194.1| Tetratricopeptide TPR_1 repeat-containing protein [Pedobacter
           saltans DSM 12145]
          Length = 228

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 47/144 (32%), Gaps = 18/144 (12%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSA 101
             +  D           Y   + +L +  F KA +       ++  +   +A  +L  + 
Sbjct: 90  EKIIADYANTKSANLAYYYLGIAYLNKGEFQKAADNL----VNYSGSDAVIAPLALGSAG 145

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV--GMSYAQMIRDVPYDQRATKLML 159
                  +Y  A +  ++ I++   +       YL   G+ Y +        Q+  K  L
Sbjct: 146 DAYTELKQYDDAINYYKKAISK--GNNLFAAPIYLKKLGLVYEE--------QKDFKSAL 195

Query: 160 QYMSRIVERYTNSPYVKGARFYVT 183
               +I E Y  SP       Y+ 
Sbjct: 196 DSYKKIKEDYPQSPVASNIDMYIA 219


>gi|281423681|ref|ZP_06254594.1| putative TPR domain protein [Prevotella oris F0302]
 gi|281402233|gb|EFB33064.1| putative TPR domain protein [Prevotella oris F0302]
          Length = 1007

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 39/115 (33%), Gaps = 19/115 (16%)

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQ----AASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
           F      SL   ++  ++ G+Y +    A    + +    P   N D   ++  +S    
Sbjct: 662 FGKHIEDSLYADSYTAFNEGRYNEVLGNAHVSAKRF----PNGANRDKFLFIAALSKLND 717

Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
                      K  LQ ++ +V  Y  S     A   +   +   A K++   ++
Sbjct: 718 --------GDAKACLQDLNTLVSTYPESQLSVMAGMIINGVK---AGKQLRGAKF 761


>gi|296125556|ref|YP_003632808.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
 gi|296017372|gb|ADG70609.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
          Length = 208

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 8/70 (11%), Positives = 22/70 (31%), Gaps = 12/70 (17%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFP---FAGVARKSLLMSAFVQYSAGKYQQAA 114
             +Y  A      ++++ +  Y+++    +    +           A   Y    Y +  
Sbjct: 91  NTLYNLANTLFDLKDYNNSIYYYDKVLELYNNFIYGIY------NKAVSYYYINDYDKC- 143

Query: 115 SLGEEYITQY 124
              + +I  Y
Sbjct: 144 --ADSFIYLY 151


>gi|225619900|ref|YP_002721157.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
 gi|225214719|gb|ACN83453.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
          Length = 660

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 37/111 (33%), Gaps = 18/111 (16%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             VY  A+     + F +A + FN     D  F   +               +Y++A   
Sbjct: 277 EAVYNMALCKQNLELFEEAIKDFNNIIDSDNIFVYYS------LGICYLELERYEEAIDN 330

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            + +I   P+  +    Y+  G +          D +  +  +   ++ +E
Sbjct: 331 FDAFIKLNPDYPD---AYFYRGNAKY--------DLKHYEEAIDDYNKTLE 370


>gi|257058872|ref|YP_003136760.1| hypotheticalprotein [Cyanothece sp. PCC 8802]
 gi|256589038|gb|ACU99924.1| TPR repeat-containing protein [Cyanothece sp. PCC 8802]
          Length = 232

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 39/127 (30%), Gaps = 24/127 (18%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREV-YEKAVLFL-------------KEQNFSKAYEY 79
            L   + +S       +  +  YQ  + ++     L              + ++  A   
Sbjct: 5   ALDCCDSRSPEPPPKAATPNCWYQLTLGFQTGHESLSTEQLRTCIKEKADQADYRCAITL 64

Query: 80  FNQCSRDFPFA--GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
            +Q     P +      + L+      +  G Y QA +  ++ I   P    +D  Y   
Sbjct: 65  LDQLILRDPESAIDYNNRGLM-----YFKQGDYDQAINDFDQAIALNP---YLDKAYNNR 116

Query: 138 GMSYAQM 144
               A++
Sbjct: 117 ANCQAEL 123


>gi|254412859|ref|ZP_05026632.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
 gi|196180594|gb|EDX75585.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
          Length = 435

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 54/153 (35%), Gaps = 21/153 (13%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           ++E YE+     ++ +   A + F Q  R  P    A  +       ++  G  Q A + 
Sbjct: 2   EQEFYERGREKAQQGDLEGAIQEFEQALRINP--EFAE-AYYRRGLARFDLGDCQSAIAD 58

Query: 117 GEEYITQYPESKNVDYVYYL-VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
             + +   PE  +     YL   ++Y          Q   +  L+   ++++   N    
Sbjct: 59  YSQALRVNPEHLDS----YLGRSLAYLA--------QGEAQASLEDAQQVLQIDGNREAA 106

Query: 176 KG----ARFYVTVGRNQLAAKEVEIGRYYLKRG 204
                 A   +   +  +A+ + +  + YL + 
Sbjct: 107 YKLQGTAYRRLGKTKEAIASFK-QAAKLYLDQK 138


>gi|219684538|ref|ZP_03539481.1| tetratricopeptide repeat domain protein [Borrelia garinii PBr]
 gi|219671900|gb|EED28954.1| tetratricopeptide repeat domain protein [Borrelia garinii PBr]
          Length = 1014

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 60/182 (32%), Gaps = 34/182 (18%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           ++   +  ++   K +++     + I   P  +  +Y  YL      +            
Sbjct: 808 AIYNLSIAKFENNKLEESLETINKAINLNP--EKSEY-LYLKASINLKNENYPN------ 858

Query: 156 KLMLQYMSRIVERYTN--SPYVKGARFYVTVGRNQLAAKEVE-------------IGRYY 200
              +   S ++E+     S Y+  A+ Y   G    A   +E             +G  Y
Sbjct: 859 --AISLYSSVIEKNPENTSAYINLAKAYEKSGNKAQAISTLEKIINKNNKLALNNLGILY 916

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS---LIQERY 257
            K+  Y  AI  F+  + N        EA   L    + +     A++++     ++   
Sbjct: 917 KKQKNYQKAIEIFEKAIKN-----SDIEAKYNLATTLIEINDNTRAKDLLKEYTKLKPNN 971

Query: 258 PQ 259
           P+
Sbjct: 972 PE 973



 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 3/62 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y KA + LK +N+  A   ++      P       + +  A     +G   QA S  E+
Sbjct: 843 LYLKASINLKNENYPNAISLYSSVIEKNPEN---TSAYINLAKAYEKSGNKAQAISTLEK 899

Query: 120 YI 121
            I
Sbjct: 900 II 901


>gi|156348528|ref|XP_001621882.1| hypothetical protein NEMVEDRAFT_v1g143331 [Nematostella vectensis]
 gi|156208205|gb|EDO29782.1| predicted protein [Nematostella vectensis]
          Length = 274

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 46/116 (39%), Gaps = 8/116 (6%)

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKE---VEIGRYYLKRGEYVAAIPRFQLVLA 218
              ++  YT S   + A         + +  +   +E GR+++K G+  +A    Q  L 
Sbjct: 99  FFHLITIYTQSEKTELAEKLFHTMTKRFSQSKTVWIEFGRFFMKTGKPDSARKLLQRGLK 158

Query: 219 NYSDAEHAEEAM-ARLVEAYVALALMDEAREVVSLIQERYPQGY--WARYVETLVK 271
           +    +H E  +   L+E           + V+  +   YP+    W+ Y++ + K
Sbjct: 159 SLPTRKHVETIVQFALME--FKNGDPQRGQTVLESVLSNYPKRTDIWSVYIDMMSK 212


>gi|332521376|ref|ZP_08397832.1| ATP-binding region ATPase domain protein [Lacinutrix algicola
           5H-3-7-4]
 gi|332043104|gb|EGI79302.1| ATP-binding region ATPase domain protein [Lacinutrix algicola
           5H-3-7-4]
          Length = 688

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 24/65 (36%), Gaps = 2/65 (3%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEE 119
             A L+LK+++++KA  YF           +  K+ +             Y+ AA    E
Sbjct: 205 NLAQLYLKKEDYNKAIRYFENALNYANGNNLELKAEILPELGGAYIKNENYKIAADNLAE 264

Query: 120 YITQY 124
            I   
Sbjct: 265 AIKLN 269


>gi|303238806|ref|ZP_07325338.1| copper amine oxidase domain protein [Acetivibrio cellulolyticus
           CD2]
 gi|302593685|gb|EFL63401.1| copper amine oxidase domain protein [Acetivibrio cellulolyticus
           CD2]
          Length = 489

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 39/113 (34%), Gaps = 14/113 (12%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           K + TI   + +   +               T      E   +A   + E+NF  A EY 
Sbjct: 11  KLSTTILAVLCIIMSIFCSGL----TVYADDTKSNEASEYITEAYAAINEKNFDLALEYC 66

Query: 81  NQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           N+         F   + KS +   +      KY +A +  ++ I  +P+  N 
Sbjct: 67  NKAIGVVSQPIF--YSLKSQI-LIY----QEKYDEALNTLDQAIALFPQYTNA 112


>gi|205363954|gb|ACI04483.1| peptidase C39-like protein [uncultured bacterium RM57]
          Length = 148

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 9/57 (15%), Positives = 17/57 (29%), Gaps = 3/57 (5%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
            +A+  ++    + A     + + + P                Y AGK   A    E
Sbjct: 64  TQALEEMQHGKSADAIATLEKMAAEHPG---QTGVEHDLGLAYYRAGKLVSARHTFE 117


>gi|224086189|ref|XP_002193000.1| PREDICTED: cell division cycle protein 27 isoform 2 [Taeniopygia
           guttata]
          Length = 826

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 51/196 (26%), Gaps = 50/196 (25%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 588 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 637

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP-------YVKGARFY 181
           N    +Y +GM Y +        Q    L   +  + ++    S         V+ A   
Sbjct: 638 N---AWYGLGMIYYK--------QEKFSLAEMHFQKALDINPQSSVLLCHIGVVQHALKK 686

Query: 182 VTVGRNQLAAKEVEI-----------GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
                + L  K + I                   +Y +A+   + +              
Sbjct: 687 SEKALDTL-NKAINIDPKNPLCKFHRASVLFANEKYKSALQELEELKQIVPKESLVY--- 742

Query: 231 ARLVEAYVALALMDEA 246
             + + Y  L     A
Sbjct: 743 FLIGKVYKKLGQTHLA 758


>gi|218903327|ref|YP_002451161.1| TPR domain protein [Bacillus cereus AH820]
 gi|228927271|ref|ZP_04090333.1| TPR repeat-containing protein [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|229121758|ref|ZP_04250979.1| TPR repeat-containing protein [Bacillus cereus 95/8201]
 gi|254722186|ref|ZP_05183974.1| TPR domain protein [Bacillus anthracis str. A1055]
 gi|218535541|gb|ACK87939.1| TPR domain protein [Bacillus cereus AH820]
 gi|228661674|gb|EEL17293.1| TPR repeat-containing protein [Bacillus cereus 95/8201]
 gi|228832418|gb|EEM77993.1| TPR repeat-containing protein [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 891

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 51/158 (32%), Gaps = 17/158 (10%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAF 102
            +  D   D       Y  A    +   + +A + F Q   +         + ++   A 
Sbjct: 591 KLIKDREIDKENNEAAYLLASANFRIGKYQEAVQNFEQALANNAKGIEPYKKDAMRDLAV 650

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
                 ++++A  +  +  T+   +++   V YL G      ++         +    + 
Sbjct: 651 SHMKMKEFEKAEDVIVKMSTK--TNEDKAIVSYLKGQLSTATVQ--------LEKAESFF 700

Query: 163 SRIV-ERYTNSPYVKG-ARFYVTVGRNQL---AAKEVE 195
              + +   NS Y    +  YV   +  L   A KE+ 
Sbjct: 701 KEAIMQDSKNSIYTIELSNLYVLWNKTNLIDSAKKEMN 738


>gi|160890864|ref|ZP_02071867.1| hypothetical protein BACUNI_03309 [Bacteroides uniformis ATCC
          8492]
 gi|156859863|gb|EDO53294.1| hypothetical protein BACUNI_03309 [Bacteroides uniformis ATCC
          8492]
          Length = 256

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 9/65 (13%), Positives = 21/65 (32%), Gaps = 15/65 (23%)

Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
          ++ K    I  + A+   +    Q +                +Y+K   ++K   +  A 
Sbjct: 2  KMNKLIRLIVLAFALSMPISIWGQCAS---------------IYQKGETYMKRGRYRDAI 46

Query: 78 EYFNQ 82
          + F  
Sbjct: 47 KSFKA 51


>gi|112984520|ref|NP_001037195.1| prolyl 4-hydroxylase alpha subunit [Bombyx mori]
 gi|37543673|gb|AAM21932.1| prolyl 4-hydroxylase alpha subunit [Bombyx mori]
          Length = 550

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 51/147 (34%), Gaps = 23/147 (15%)

Query: 61  YEKAVLFLKEQNFSKAYEYF-NQCSRD------FPFAGVARKSLLMSAFVQYSAGKYQQA 113
           YE       +++++ A  +      +       +PF       L    F  Y  G  + A
Sbjct: 169 YELGRTLYNDKDYTNALAWMKEALRKYKDENVMYPFTE--VDILEYIGFAYYLNGDVKTA 226

Query: 114 ASLGEEYITQYPESK----NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
               +  ++  P+      N+   +Y    + A+   ++   QR  +   +      + Y
Sbjct: 227 LEWTQRLLSVDPKHVRARGNIP--HYQK--TIAEQEAELKKQQRG-ETSDEPEEEDGQDY 281

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEI 196
             S Y K  + Y ++ R      E+EI
Sbjct: 282 ELSEYAKERKVYESLCRG-----EMEI 303


>gi|2580570|gb|AAC51839.1| ubiquitous TPR motif, X isoform [Homo sapiens]
 gi|2580572|gb|AAC51840.1| ubiquitous TPR motif, X isoform [Homo sapiens]
          Length = 1401

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A +  ++  
Sbjct: 107 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 153

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198
             ++    +    K     V +               QLA              +  I  
Sbjct: 154 QEVLYVDPSFCRAKEIHLRVGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 213

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 214 LYETQRKYHSAKEAYEQLLQT 234


>gi|325119616|emb|CBZ55169.1| putative TPR domain-containing protein [Neospora caninum Liverpool]
          Length = 546

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 23/63 (36%), Gaps = 3/63 (4%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
             A   LKE ++S+  E+        P      K+LL  A       +Y++A       +
Sbjct: 85  NIAAGLLKEGSYSRCIEHCEHVLHVQPGN---EKALLRMAKAHAELQEYKKAEDAIRRLL 141

Query: 122 TQY 124
             +
Sbjct: 142 KVH 144


>gi|73965114|ref|XP_859939.1| PREDICTED: similar to Cell division cycle protein 27 homolog
           (CDC27Hs) (H-NUC) isoform 3 [Canis familiaris]
          Length = 770

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 31/104 (29%), Gaps = 28/104 (26%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 587 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 636

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           N    +Y +GM Y +        Q    L   +  + ++    S
Sbjct: 637 N---AWYGLGMIYYK--------QEKFSLAEMHFQKALDINPQS 669


>gi|15808001|ref|NP_285665.1| GGDEF family protein [Deinococcus radiodurans R1]
 gi|6460735|gb|AAF12440.1|AE001863_65 GGDEF family protein [Deinococcus radiodurans R1]
          Length = 860

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 22/56 (39%), Gaps = 4/56 (7%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL----MSAFVQYSAGKYQQA 113
              +  +++ N+ +A  +  +  R  P +   R+  L      A+  Y AG    A
Sbjct: 181 NLGISNIEQGNYREAIYWLMEAYRAHPDSNEDRQLELATLTNLAYAHYLAGDLSLA 236


>gi|78045823|ref|YP_361998.1| hypothetical protein XCV0267 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78034253|emb|CAJ21898.1| putative membrane protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 837

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 47/157 (29%), Gaps = 23/157 (14%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
             + +     D  T        Y        E  +  A ++F +     P   +A    +
Sbjct: 396 SIRQNSPALPDVTTSSLDALRAYALGQQRYSEGKYGAALDFFQKAVDIDPHFALAWLGQV 455

Query: 99  MSAFVQYSAGKYQQAASL---GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
                 ++   Y++A       E++ ++ P  +      Y+   S+   I D        
Sbjct: 456 R---AHFANVDYKKATETLRVAEQFKSRLPPRE----ALYVK--SWGVQILDPA------ 500

Query: 156 KLMLQYMSRIVERYTNSPYVK-GARFYVT-VGRNQLA 190
                +  ++ E Y +  Y    A   +     N+ A
Sbjct: 501 -QAADFWIQMAELYPD--YAPAQANAAMDLFVANRFA 534


>gi|302817471|ref|XP_002990411.1| hypothetical protein SELMODRAFT_428896 [Selaginella moellendorffii]
 gi|300141796|gb|EFJ08504.1| hypothetical protein SELMODRAFT_428896 [Selaginella moellendorffii]
          Length = 685

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 36/112 (32%), Gaps = 17/112 (15%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSA--GKYQQAAS--- 115
           +  + +  + F +A   F++  R  P  +   + ++L      Q+S     Y +A     
Sbjct: 264 RGQVRVDAKRFEEAVADFDEAIRRQPENYRAYSGRALAFEGLAQWSNAVADYTEALQRGR 323

Query: 116 LGEEYITQYPESKNVDYVYYLVG--MSYAQMIRDVPYDQRATKLMLQYMSRI 165
               Y           YV    G  ++     ++   D  A+    Q    +
Sbjct: 324 AATGYRD--------PYVMNSRGNALASLGRYKEALRDYSASFDAFQDAREL 367


>gi|301117386|ref|XP_002906421.1| RNA polymerase-associated protein CTR9 [Phytophthora infestans
           T30-4]
 gi|262107770|gb|EEY65822.1| RNA polymerase-associated protein CTR9 [Phytophthora infestans
           T30-4]
          Length = 1166

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/67 (14%), Positives = 26/67 (38%), Gaps = 3/67 (4%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
             A +F+ E+ + +A + +    ++ +    +  + LL  A   Y +  +    +     
Sbjct: 791 NLAHIFVAEERYQEAIQLYTVCLTKCYQGQDL--EVLLYLAKAYYESKDFPSCIATLSRA 848

Query: 121 ITQYPES 127
           +  YP  
Sbjct: 849 LHMYPND 855


>gi|302422306|ref|XP_003008983.1| mitochondrial precursor proteins import receptor [Verticillium
           albo-atrum VaMs.102]
 gi|261352129|gb|EEY14557.1| mitochondrial precursor proteins import receptor [Verticillium
           albo-atrum VaMs.102]
          Length = 622

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 47/136 (34%), Gaps = 20/136 (14%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGV 92
           +G   +++ D       +       Y +A L   +  FS A + + +     RDF F+  
Sbjct: 386 LGAPEKAAEDFEKALEQNADDPDIYYHRAQLHFIKGEFSDAAKDYQKSIDLDRDFIFSH- 444

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
                +     QY  G    + S+    I  + E  +V Y YY           ++  DQ
Sbjct: 445 -----IQLGVTQYKMGSIASSMSIFRRCIKNFKEVPDV-YNYY----------GELLLDQ 488

Query: 153 RATKLMLQYMSRIVER 168
              +  ++     +E 
Sbjct: 489 GNFQEAVEKFDTAIEM 504


>gi|167632739|ref|ZP_02391065.1| TPR domain protein [Bacillus anthracis str. A0442]
 gi|170686617|ref|ZP_02877838.1| TPR domain protein [Bacillus anthracis str. A0465]
 gi|254684775|ref|ZP_05148635.1| TPR domain protein [Bacillus anthracis str. CNEVA-9066]
 gi|254743593|ref|ZP_05201278.1| TPR domain protein [Bacillus anthracis str. Kruger B]
 gi|167531551|gb|EDR94216.1| TPR domain protein [Bacillus anthracis str. A0442]
 gi|170669693|gb|EDT20435.1| TPR domain protein [Bacillus anthracis str. A0465]
          Length = 891

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 51/158 (32%), Gaps = 17/158 (10%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAF 102
            +  D   D       Y  A    +   + +A + F Q   +         + ++   A 
Sbjct: 591 KLIKDREIDKENNEAAYLLASANFRIGKYQEAVQNFEQALANNAKGIEPYKKDAMRDLAV 650

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
                 ++++A  +  +  T+   +++   V YL G      ++         +    + 
Sbjct: 651 SHMKMKEFEKAEDVIVKMSTK--TNEDKAIVSYLKGQLSTATVQ--------LEKAESFF 700

Query: 163 SRIV-ERYTNSPYVKG-ARFYVTVGRNQL---AAKEVE 195
              + +   NS Y    +  YV   +  L   A KE+ 
Sbjct: 701 KEAIMQDSKNSIYTIELSNLYVLWNKTNLIDSAKKEMN 738


>gi|146300345|ref|YP_001194936.1| TPR repeat-containing protein [Flavobacterium johnsoniae UW101]
 gi|146154763|gb|ABQ05617.1| Tetratricopeptide TPR_2 repeat protein [Flavobacterium johnsoniae
           UW101]
          Length = 464

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 28/103 (27%), Gaps = 20/103 (19%)

Query: 71  QNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
           + + +A   F+       +F        + +  A       KY +A       I      
Sbjct: 215 KEYEEAIRAFDYATLIDDEFLG------AFMEKAKAYERLKKYNEAIESYNRTIEL---D 265

Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
               Y    +G  Y ++              LQY ++ V    
Sbjct: 266 DATSYALLRIGKCYEKL--------GNAVKALQYYNQTVHEDP 300


>gi|90409064|ref|ZP_01217189.1| hypothetical protein PCNPT3_10646 [Psychromonas sp. CNPT3]
 gi|90309821|gb|EAS37981.1| hypothetical protein PCNPT3_10646 [Psychromonas sp. CNPT3]
          Length = 641

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 31/84 (36%), Gaps = 17/84 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           + A    +++++  A E +     +F                 Y   KY  A S   E I
Sbjct: 353 QNAYQAYQDKDYKHAAELYE---NNF-----------DKGAALYKNKKYSDALSAFTEVI 398

Query: 122 TQYPESKNVDYVYYLVGMSYAQMI 145
            + P + +    +Y  G S+A++ 
Sbjct: 399 KKDPNNAH---AFYNQGNSFAKLD 419


>gi|88603325|ref|YP_503503.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
 gi|88188787|gb|ABD41784.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
          Length = 314

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 7/73 (9%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQA 113
              ++  +   FL   +FS+A   F+Q  +  P +         L  A  Q  AG+ +QA
Sbjct: 60  TADDLLAEGERFLLNGSFSEATRAFDQVLQADPDSSPGW-----LGLARAQSGAGEQEQA 114

Query: 114 ASLGEEYITQYPE 126
               EE++ ++P+
Sbjct: 115 LISLEEFLFRHPD 127


>gi|118349808|ref|XP_001008185.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89289952|gb|EAR87940.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 1242

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/115 (11%), Positives = 37/115 (32%), Gaps = 22/115 (19%)

Query: 63  KAVLFLKEQNFSKAYEYFNQ-CS----RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           K  ++   +   +A + F +       + + +  +A +      ++Q       +A    
Sbjct: 862 KGKIYSIRKEHEEAIKNFEKALECDQSQTYLYEELANQ------YLQLKIKD--KALECY 913

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           + +I  YP +       Y++G         V   +      + Y  + +     +
Sbjct: 914 QNFIQAYPYNPQ---ALYMIG------FLLVSLSEDNINKAVSYFEKSIRVQPTN 959


>gi|55981628|ref|YP_144925.1| TPR repeat-containing protein [Thermus thermophilus HB8]
 gi|55773041|dbj|BAD71482.1| tetratricopeptide repeat family protein [Thermus thermophilus HB8]
          Length = 453

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 30/81 (37%), Gaps = 7/81 (8%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           E+    L E  +++A   F +  R   +     ++ L         G+ ++A    ++  
Sbjct: 28  ERGERLLSEGAYAEAVAAFEEVLRQD-YGQF--QAHLGLGVALVRLGRLEEARFAFDQMT 84

Query: 122 TQYP----ESKNVDYVYYLVG 138
             +P       N+  VY  +G
Sbjct: 85  RVFPDRYEGHFNLGQVYLRLG 105


>gi|332663336|ref|YP_004446124.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332332150|gb|AEE49251.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
          Length = 665

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 61/184 (33%), Gaps = 39/184 (21%)

Query: 17  YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
           ++L       F   A+C L G              + +    +  ++  +   E+ ++KA
Sbjct: 3   HKLTLLFFIGFSFFALCGLKG------------QPSSLVMAAQFTKEGDIAFTEKKYNKA 50

Query: 77  YEYFNQC----SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
            + + Q              AR+ +   A      G +QQA +   + I   P+     Y
Sbjct: 51  IKLYKQALTISDSLHA----ARRGM---AAAFEQTGNFQQALTAYLKVIEMSPKFSRAVY 103

Query: 133 -----VYY-----LVGMSYAQMIRDVPYDQRATKLMLQY-MSRIVERYTNSPYVKGARFY 181
                +YY     +  ++Y Q  + +          L +  + + E+   S Y++     
Sbjct: 104 YEVGQLYYKMGQKMRAVTYFQQFQRLQL-----LDALSFTTNGLHEQNLESGYLEKLPNN 158

Query: 182 VTVG 185
           +   
Sbjct: 159 IRAC 162


>gi|300868026|ref|ZP_07112664.1| Serine/threonine protein kinase with TPR repeats [Oscillatoria sp.
           PCC 6506]
 gi|300333946|emb|CBN57842.1| Serine/threonine protein kinase with TPR repeats [Oscillatoria sp.
           PCC 6506]
          Length = 702

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 64/223 (28%), Gaps = 38/223 (17%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQ 104
            YL ++ +     E++ +         + +A   +             A       A   
Sbjct: 321 AYLVNIFNSANATELHTRGNTLYNLNRYEEALAAYNQAIKIK---GDYAE-VWKDKAKAL 376

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ-RATKLMLQYMS 163
           Y   KY+++    ++ I   PE        YL   +     R    D+    +  +    
Sbjct: 377 YELKKYKESREACDKAIQLNPE--------YLEAWT----DRGYTLDKLEKYQEAIASFE 424

Query: 164 RIVERYTNSPYVK----GARFYVTVGRNQLAAKEVEIG---RYY----------LKRGEY 206
           R +E   + P        A   +      +A+ E  +     +Y              +Y
Sbjct: 425 RALEIQPDYPEAWKGKGDALLNLQRYEEAIASYEKAVKSQPNFYDAWYSKGIAHQNLKQY 484

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
             A   ++  +   SD     +A   L    + L    EA E 
Sbjct: 485 QPAFDAYKQAVELKSDNS---KAWYNLGNVQLELNKNQEAVEA 524


>gi|299469781|emb|CBN76635.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 544

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 55/184 (29%), Gaps = 26/184 (14%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S  D   +  +           N+ +A E + +          A +  L  A   Y    
Sbjct: 43  SGEDDTLEDTLMWLGYCAFHLGNYQRAIEAYQELESL--GG--ADEVTLFLACCYYYMQM 98

Query: 110 YQQAASLGE---------EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           + +A    +           +  +   K +D       M+Y Q + D   DQ  +   + 
Sbjct: 99  FDKAEEAAKKGPECALKNR-LLFHVSHKLLDE---NKLMTYHQKLSDTNEDQ-LSLAAIH 153

Query: 161 YMSRIVERYTNSPYVKGARFY-VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
           Y+        +           +   R+ LA   V +   Y K   Y  ++    + L  
Sbjct: 154 YLRS------HFQEATDIYKRLLLENRDDLALN-VYVAMCYYKLDYYDVSLEILAVYLQA 206

Query: 220 YSDA 223
           + D+
Sbjct: 207 FPDS 210


>gi|297277412|ref|XP_002801350.1| PREDICTED: serine/threonine-protein phosphatase 5 [Macaca mulatta]
          Length = 482

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 30/101 (29%), Gaps = 15/101 (14%)

Query: 104 QYSAGKYQQAASLGEEYITQYP------ESKNVDYVYYLVGMSYAQMIRDVPYD---QRA 154
            + A  Y+ A     + I   P       ++++    YL    Y   + D        + 
Sbjct: 38  YFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLA---YLRTECYGYALGDATRAIELDKK 94

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
            +  L+    +V+   +      A+         +  K  E
Sbjct: 95  FRAALRDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 132


>gi|284097303|ref|ZP_06385439.1| hypothetical protein POR_0026 [Candidatus Poribacteria sp. WGA-A3]
 gi|283831177|gb|EFC35151.1| hypothetical protein POR_0026 [Candidatus Poribacteria sp. WGA-A3]
          Length = 637

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 34/109 (31%), Gaps = 20/109 (18%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF---VQYSAGKYQQAASLGE 118
            +   ++ + +  KA E FN+     P       + +   +        G Y +A +   
Sbjct: 184 NRGRAYINKNDHDKAIEDFNKILEQDP-----ANAEIYL-YRVLAYSLKGDYDKAIADCT 237

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           + +   P   N    +   G +Y         DQ   +  L      V+
Sbjct: 238 KTLEFKPNYAN---AHLCRGFAYI--------DQGDQEKFLDAFKDFVK 275



 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 69/211 (32%), Gaps = 46/211 (21%)

Query: 44  RDVYLDSVTDVRYQRE-VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
             + ++ V D   ++E + +KA     + ++ +      +            +     A 
Sbjct: 60  ETLQINVVVDKDIEKEYLKQKAEQLDSDGSWDELIPLCTKIIDL-------EQEPHEKAS 112

Query: 103 VQYSAG-------KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
             +  G       +   A +   + +   P   N    Y   G++Y    +   +D    
Sbjct: 113 AYFKRGIAYRHKGELDLAIADFTQALRLNPAHAN---AYIRRGIAY---DKKGDHDLT-- 164

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
              +   ++++E   +               N  A      GR Y+ + ++  AI  F  
Sbjct: 165 ---IADYTKVLELDPD---------------NMFAYH--NRGRAYINKNDHDKAIEDFNK 204

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEA 246
           +L    D  +AE  + R V AY      D+A
Sbjct: 205 ILE--QDPANAEIYLYR-VLAYSLKGDYDKA 232


>gi|284039483|ref|YP_003389413.1| beta-lactamase [Spirosoma linguale DSM 74]
 gi|283818776|gb|ADB40614.1| beta-lactamase [Spirosoma linguale DSM 74]
          Length = 496

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 23/76 (30%), Gaps = 3/76 (3%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
             + E+ + A   +      +A E F      +P +          A      G  + A 
Sbjct: 412 PNEDELNDWAYRLMSSGQTKEALELFKLNVDLYPQS-W--NVYDSLAESYERLGNSELAV 468

Query: 115 SLGEEYITQYPESKNV 130
                 +   P++KN 
Sbjct: 469 KHYNRSLALNPDNKNA 484


>gi|284040468|ref|YP_003390398.1| hypothetical protein Slin_5634 [Spirosoma linguale DSM 74]
 gi|283819761|gb|ADB41599.1| Tetratricopeptide TPR_2 repeat protein [Spirosoma linguale DSM 74]
          Length = 231

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 35/85 (41%), Gaps = 1/85 (1%)

Query: 50  SVTDVRYQREVYE-KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           S +D+  Q   Y      ++++++F +A +Y+ + +   P    +   LL        A 
Sbjct: 133 SSSDLLVQARAYALTGDAYMEKKSFDEAADYYRKAADYKPNKFFSPGYLLKLGVAYEQAK 192

Query: 109 KYQQAASLGEEYITQYPESKNVDYV 133
           +  +A +   E I +Y +S      
Sbjct: 193 QNDKAIAAYNEIIEKYSQSAEAPTA 217


>gi|169827526|ref|YP_001697684.1| hypothetical protein Bsph_1967 [Lysinibacillus sphaericus C3-41]
 gi|168992014|gb|ACA39554.1| Hypothetical ypiA protein [Lysinibacillus sphaericus C3-41]
          Length = 422

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 32/86 (37%), Gaps = 7/86 (8%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVA 93
            G   +++ D YL ++ D      ++  A    + Q +  A +   +     P  F+   
Sbjct: 185 AGAAYETALDYYLKALEDEVKPDILFGAAYSAFQSQKYEMAIKQLEELKELDPDYFSAY- 243

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEE 119
               L+ A       + Q+A +  +E
Sbjct: 244 ----LLLAESYAMTEENQKAYTAIQE 265


>gi|150005799|ref|YP_001300543.1| hypothetical protein BVU_3292 [Bacteroides vulgatus ATCC 8482]
 gi|212693193|ref|ZP_03301321.1| hypothetical protein BACDOR_02703 [Bacteroides dorei DSM 17855]
 gi|254882019|ref|ZP_05254729.1| BatE [Bacteroides sp. 4_3_47FAA]
 gi|294776178|ref|ZP_06741667.1| tetratricopeptide repeat protein [Bacteroides vulgatus PC510]
 gi|149934223|gb|ABR40921.1| BatE, TRP domain containing protein [Bacteroides vulgatus ATCC
           8482]
 gi|212664298|gb|EEB24870.1| hypothetical protein BACDOR_02703 [Bacteroides dorei DSM 17855]
 gi|254834812|gb|EET15121.1| BatE [Bacteroides sp. 4_3_47FAA]
 gi|294450001|gb|EFG18512.1| tetratricopeptide repeat protein [Bacteroides vulgatus PC510]
          Length = 272

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/115 (11%), Positives = 33/115 (28%), Gaps = 6/115 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY---EKAVLFLKEQNFSK 75
           + K    + F I+   +       S  V   +        + +    +A       +F+ 
Sbjct: 1   MTKIYFILIFLISFVTVYAQNESDSAQVTAQTEMPQSAAVQTFPTKTEADSAYIRNDFAA 60

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           + E +    ++    G +           Y      +A    E  +   P + ++
Sbjct: 61  SVEMYENILKN---EGESSDIYYNLGNSYYKMNNIAKAVLNYERALLLNPGNSDI 112


>gi|153001302|ref|YP_001366983.1| TPR repeat-containing protein [Shewanella baltica OS185]
 gi|151365920|gb|ABS08920.1| Tetratricopeptide TPR_2 repeat protein [Shewanella baltica OS185]
          Length = 693

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 22/58 (37%), Gaps = 14/58 (24%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++A+   + QN++ A + F                       QY AG Y+QA    E+
Sbjct: 363 QQAMQAYQSQNYANAAKQFESPQWR--------------GSAQYKAGDYEQALKTFEQ 406



 Score = 35.5 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 22/65 (33%), Gaps = 7/65 (10%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN-QCSRD--FPFAGVARKS 96
           +    +  L +       + +Y +    ++     KA E +     +   FP    A K+
Sbjct: 393 KAGDYEQALKTFEQDSSAQGLYNQGNALMQLGKPDKAKERYQAALEKQADFP----AAKA 448

Query: 97  LLMSA 101
            L  A
Sbjct: 449 NLELA 453


>gi|332211329|ref|XP_003254773.1| PREDICTED: prolyl 4-hydroxylase subunit alpha-3 [Nomascus
           leucogenys]
          Length = 544

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 28/80 (35%), Gaps = 9/80 (11%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDF--PFAGVA-------RKSLLMSAFVQYSAGKYQ 111
           ++   +     ++  A  +  +    F   +             +L   AF  + AG   
Sbjct: 185 FQVGKVAYDMGDYYHAIPWLEEAVSLFRGSYGEWKTEDEASLEDALDHLAFAYFQAGNVS 244

Query: 112 QAASLGEEYITQYPESKNVD 131
            A SL  E++   P++K + 
Sbjct: 245 CALSLSREFLLYSPDNKRMA 264


>gi|330722420|gb|EGH00263.1| TPR repeat protein [gamma proteobacterium IMCC2047]
          Length = 850

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 80/216 (37%), Gaps = 41/216 (18%)

Query: 67  FLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
             ++Q++  + E  N      R+         +LL+   +    GKY+QA    E ++  
Sbjct: 272 AFQKQDYEASAELANNVLAIDRNHAG------ALLLVGTIAAIEGKYEQAEVSLERFLKL 325

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER--YTNSPYVK----- 176
            P+            ++YAQ+  +        +  L+ +  I E+    ++  +      
Sbjct: 326 VPQHIQA-----RKVLAYAQLNNNRQ------EQALETLHPIAEQEGAPDTQLLALIARA 374

Query: 177 -----GARFYVTVGRNQL----AAKE--VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
                 A       R  L    A  E  + + R Y+ +  +  AI   +  +   +D+E 
Sbjct: 375 ALRSGEAEQSSLYLRQALESDPANDEVRLALARSYILQRHFDQAIAELKS-IKGSADSEL 433

Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           + + +   V+AY+       A + ++++QE  P   
Sbjct: 434 SAQLLV--VQAYMQSQQYQAALKELAVMQENMPDSP 467



 Score = 35.9 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 40/105 (38%), Gaps = 15/105 (14%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           KA   +  ++   A + + Q     P   V +K         + AG+  +A +L E    
Sbjct: 709 KAEQAMHLKDTQTAIKLYQQLYDKNPNLSVLQK----LVQAHWLAGQQDKALALLEVASQ 764

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           +YP   N+ +V YL G +Y          Q  T   +    R ++
Sbjct: 765 RYP---NLAHVAYLQGTAYQA--------QGNTPKAIGAYRRAIQ 798


>gi|313677805|ref|YP_004055801.1| hypothetical protein Ftrac_3726 [Marivirga tractuosa DSM 4126]
 gi|312944503|gb|ADR23693.1| hypothetical protein Ftrac_3726 [Marivirga tractuosa DSM 4126]
          Length = 240

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 7/105 (6%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQR----EVYEKAVLFLKEQNFSKAY 77
            A +I  +I + FL+G   +          T    +R    E+Y KA     ++ +S+A 
Sbjct: 89  VAASIILAIGLYFLIGEMSKPQYQEIAQIPTIHLTERSIDGEIYTKAENAFNQEQYSEAI 148

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           + F+Q   +       +  +L  A      G  ++A  L EE I 
Sbjct: 149 KMFDQILNEDSQN---QSIMLYKAIAHTENGATEKARMLYEELIQ 190


>gi|302342895|ref|YP_003807424.1| hypothetical protein Deba_1462 [Desulfarculus baarsii DSM 2075]
 gi|301639508|gb|ADK84830.1| hypothetical protein Deba_1462 [Desulfarculus baarsii DSM 2075]
          Length = 392

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 51/149 (34%), Gaps = 12/149 (8%)

Query: 45  DVYLDSVTDVRYQREVY----EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
           +  ++   D  +  E Y    E    +L   +++     F +    +P A  A  +    
Sbjct: 66  EAIIEQCPDSTHAPEAYWRLAEVYKRYLGLPDYTAIALLFEKYLARYPRAADAPMARRQL 125

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
                  G+++  A+   +     P  +  D   +  G+SYAQ +         T     
Sbjct: 126 IEAYEKTGQWEPVAAYFAK--DLGPMDQLPDSRLFQDGLSYAQALEHTGR----TAQAKA 179

Query: 161 YMSRIVERYT--NSPYVKGARFYVTVGRN 187
           +  +IV R    NSP    AR  +    +
Sbjct: 180 WYQKIVARDGGANSPAAAKARQRLAALGD 208



 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 33/91 (36%), Gaps = 11/91 (12%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
            +      + +  I+E+  +S +   A + +     +           YL   +Y A   
Sbjct: 55  PQDYANQRRLLEAIIEQCPDSTHAPEAYWRLAEVYKR-----------YLGLPDYTAIAL 103

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
            F+  LA Y  A  A  A  +L+EAY     
Sbjct: 104 LFEKYLARYPRAADAPMARRQLIEAYEKTGQ 134


>gi|293362726|ref|XP_002730231.1| PREDICTED: 4lysine (K)-specific demethylase 6A [Rattus norvegicus]
          Length = 1236

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/140 (13%), Positives = 40/140 (28%), Gaps = 42/140 (30%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
            +Y +A S  + Y +        DY       Y +G+ Y            A +  ++  
Sbjct: 106 EEYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 152

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QL------------AAKEVEIGR 198
             ++    +    K     + +               QL            A  +  I  
Sbjct: 153 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 212

Query: 199 YYLKRGEYVAAIPRFQLVLA 218
            Y  + +Y +A   ++ +L 
Sbjct: 213 LYETQRKYHSAKEAYEQLLQ 232


>gi|293350697|ref|XP_002727575.1| PREDICTED: ubiquitously transcribed tetratricopeptide repeat gene,
           Y chromosome isoform 5 [Rattus norvegicus]
          Length = 1355

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/140 (13%), Positives = 40/140 (28%), Gaps = 42/140 (30%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
            +Y +A S  + Y +        DY       Y +G+ Y            A +  ++  
Sbjct: 106 EEYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 152

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QL------------AAKEVEIGR 198
             ++    +    K     + +               QL            A  +  I  
Sbjct: 153 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 212

Query: 199 YYLKRGEYVAAIPRFQLVLA 218
            Y  + +Y +A   ++ +L 
Sbjct: 213 LYETQRKYHSAKEAYEQLLQ 232


>gi|293350695|ref|XP_002727574.1| PREDICTED: ubiquitously transcribed tetratricopeptide repeat gene,
           Y chromosome isoform 4 [Rattus norvegicus]
          Length = 1407

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/140 (13%), Positives = 40/140 (28%), Gaps = 42/140 (30%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
            +Y +A S  + Y +        DY       Y +G+ Y            A +  ++  
Sbjct: 106 EEYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 152

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QL------------AAKEVEIGR 198
             ++    +    K     + +               QL            A  +  I  
Sbjct: 153 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 212

Query: 199 YYLKRGEYVAAIPRFQLVLA 218
            Y  + +Y +A   ++ +L 
Sbjct: 213 LYETQRKYHSAKEAYEQLLQ 232


>gi|293350693|ref|XP_002727573.1| PREDICTED: ubiquitously transcribed tetratricopeptide repeat gene,
           Y chromosome isoform 3 [Rattus norvegicus]
          Length = 1423

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/140 (13%), Positives = 40/140 (28%), Gaps = 42/140 (30%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
            +Y +A S  + Y +        DY       Y +G+ Y            A +  ++  
Sbjct: 106 EEYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 152

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QL------------AAKEVEIGR 198
             ++    +    K     + +               QL            A  +  I  
Sbjct: 153 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 212

Query: 199 YYLKRGEYVAAIPRFQLVLA 218
            Y  + +Y +A   ++ +L 
Sbjct: 213 LYETQRKYHSAKEAYEQLLQ 232


>gi|293350689|ref|XP_002727571.1| PREDICTED: ubiquitously transcribed tetratricopeptide repeat gene,
           Y chromosome isoform 1 [Rattus norvegicus]
          Length = 1452

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/140 (13%), Positives = 40/140 (28%), Gaps = 42/140 (30%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
            +Y +A S  + Y +        DY       Y +G+ Y            A +  ++  
Sbjct: 106 EEYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 152

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QL------------AAKEVEIGR 198
             ++    +    K     + +               QL            A  +  I  
Sbjct: 153 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 212

Query: 199 YYLKRGEYVAAIPRFQLVLA 218
            Y  + +Y +A   ++ +L 
Sbjct: 213 LYETQRKYHSAKEAYEQLLQ 232


>gi|225873567|ref|YP_002755026.1| putative N-acetylmuramoyl-L-alanine amidase [Acidobacterium
           capsulatum ATCC 51196]
 gi|225792984|gb|ACO33074.1| putative N-acetylmuramoyl-L-alanine amidase [Acidobacterium
           capsulatum ATCC 51196]
          Length = 752

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 54/170 (31%), Gaps = 27/170 (15%)

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY-------PESKNVDYVYYLVG 138
                  A  + L SA  Q  A    +A    E  +  Y       P S +     Y VG
Sbjct: 46  RHRMDAYAEAARLRSALEQKPARDRTEA--EYERVLDAYRVVYHRDPGSMHAAASVYAVG 103

Query: 139 --MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
             ++         +D +A++  +     + ++Y  S Y       V    +     E+E 
Sbjct: 104 TLLAEYGQ---TFHDPKASRDAIGQYEFLRKQYPGSSY------RVLALLD---EGEIEA 151

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
              +  R    AA  + +L L  Y  +  A EA   L          + A
Sbjct: 152 RDLHEDR----AAQTKLKLFLKMYPHSAMANEARYALANLRRDDGQREAA 197



 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 11/91 (12%), Positives = 28/91 (30%), Gaps = 7/91 (7%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL--- 116
           + E    F   +    A   +    + +P +     +LL    +   A    +  +    
Sbjct: 106 LAEYGQTFHDPKASRDAIGQYEFLRKQYPGSSYRVLALLDEGEI--EARDLHEDRAAQTK 163

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
            + ++  YP S   +   Y   ++  +    
Sbjct: 164 LKLFLKMYPHSAMANEARY--ALANLRRDDG 192


>gi|149044362|gb|EDL97683.1| rCG42878, isoform CRA_b [Rattus norvegicus]
          Length = 1327

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/140 (13%), Positives = 40/140 (28%), Gaps = 42/140 (30%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
            +Y +A S  + Y +        DY       Y +G+ Y            A +  ++  
Sbjct: 106 EEYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 152

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QL------------AAKEVEIGR 198
             ++    +    K     + +               QL            A  +  I  
Sbjct: 153 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 212

Query: 199 YYLKRGEYVAAIPRFQLVLA 218
            Y  + +Y +A   ++ +L 
Sbjct: 213 LYETQRKYHSAKEAYEQLLQ 232


>gi|149044361|gb|EDL97682.1| rCG42878, isoform CRA_a [Rattus norvegicus]
          Length = 1372

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/140 (13%), Positives = 40/140 (28%), Gaps = 42/140 (30%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
            +Y +A S  + Y +        DY       Y +G+ Y            A +  ++  
Sbjct: 106 EEYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 152

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QL------------AAKEVEIGR 198
             ++    +    K     + +               QL            A  +  I  
Sbjct: 153 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 212

Query: 199 YYLKRGEYVAAIPRFQLVLA 218
            Y  + +Y +A   ++ +L 
Sbjct: 213 LYETQRKYHSAKEAYEQLLQ 232


>gi|170727983|ref|YP_001762009.1| TPR repeat-containing protein [Shewanella woodyi ATCC 51908]
 gi|169813330|gb|ACA87914.1| Tetratricopeptide TPR_2 repeat protein [Shewanella woodyi ATCC
           51908]
          Length = 729

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/72 (13%), Positives = 23/72 (31%), Gaps = 7/72 (9%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF--VQYSAGKYQQAASLGE 118
           Y   +  ++ +++  A +Y    +   P     +       +       GK   A    +
Sbjct: 636 YGLGLHLIRAKDYLAAEKYLENAATLAP-----QNVQYQYVYLVALDHNGKTTDALDYLK 690

Query: 119 EYITQYPESKNV 130
            Y + YP    +
Sbjct: 691 RYFSSYPAHPQL 702


>gi|293350691|ref|XP_002727572.1| PREDICTED: ubiquitously transcribed tetratricopeptide repeat gene,
           Y chromosome isoform 2 [Rattus norvegicus]
          Length = 1400

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/140 (13%), Positives = 40/140 (28%), Gaps = 42/140 (30%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
            +Y +A S  + Y +        DY       Y +G+ Y            A +  ++  
Sbjct: 106 EEYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 152

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QL------------AAKEVEIGR 198
             ++    +    K     + +               QL            A  +  I  
Sbjct: 153 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 212

Query: 199 YYLKRGEYVAAIPRFQLVLA 218
            Y  + +Y +A   ++ +L 
Sbjct: 213 LYETQRKYHSAKEAYEQLLQ 232


>gi|67458702|ref|YP_246326.1| TPR repeat-containing protein [Rickettsia felis URRWXCal2]
 gi|67004235|gb|AAY61161.1| Tetratricopeptide repeat domain containing protein [Rickettsia
           felis URRWXCal2]
          Length = 706

 Score = 37.8 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 64/185 (34%), Gaps = 36/185 (19%)

Query: 55  RYQREVYE-KAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQ 112
             + E+Y  K     + + + +A + FN+  +  P  +    K         Y   +Y++
Sbjct: 277 PTEAELYYLKGRCLYELKRYKEAVKEFNKAIKFEPDISSYYYKGQ-----ALYRLKEYKK 331

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A       ++ YP+  N  Y YY   +S  ++ R         +  ++  +  ++   +S
Sbjct: 332 AIEAYNHALS-YPQYDN--YTYYFKALSLKKLER--------YEEAIEVFNEALKI--DS 378

Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRY--------------YLKRGEYVAAIPRFQLVLA 218
              +       V  N+L   E  I  +              Y K    +A + R++  + 
Sbjct: 379 KDERTLSAKGQVL-NELMRYEEAIKVFDKAIRIDPKNRNAIYAKGEA-LAKLMRYEEAIK 436

Query: 219 NYSDA 223
            +   
Sbjct: 437 AFDKT 441



 Score = 36.6 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 41/127 (32%), Gaps = 23/127 (18%)

Query: 72  NFSKAYE---YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
            + +A E      +     P+    + S+L          KY++A       I   P   
Sbjct: 227 KYDEAIECCDKIIEIDSLEPYGYFNKGSMLRL------NKKYEEAIEAFNMAINLMPTEA 280

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN---SPYVKGARFYVTVG 185
            +   YYL G    ++ R         K  ++  ++ ++   +     Y   A + +   
Sbjct: 281 EL---YYLKGRCLYELKR--------YKEAVKEFNKAIKFEPDISSYYYKGQALYRLKEY 329

Query: 186 RNQLAAK 192
           +  + A 
Sbjct: 330 KKAIEAY 336


>gi|323493531|ref|ZP_08098653.1| hypothetical protein VIBR0546_14460 [Vibrio brasiliensis LMG 20546]
 gi|323312354|gb|EGA65496.1| hypothetical protein VIBR0546_14460 [Vibrio brasiliensis LMG 20546]
          Length = 624

 Score = 37.8 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 11/84 (13%), Positives = 30/84 (35%), Gaps = 15/84 (17%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCS----RDFPFAGV---------ARKSL--LMSAFVQYS 106
           ++A+   + ++++ A E F          +              A +       A     
Sbjct: 349 QQAMQRYQAKDYTAAAELFEDQKWKGIAQYQAGDFPAAIDSLQGAEQLEDKYNLANAYAQ 408

Query: 107 AGKYQQAASLGEEYITQYPESKNV 130
            G+  QAA + ++ + + P+ ++ 
Sbjct: 409 NGQLDQAAQMYQQILAEKPDHQDA 432


>gi|297578952|ref|ZP_06940880.1| GGDEF family protein [Vibrio cholerae RC385]
 gi|297536546|gb|EFH75379.1| GGDEF family protein [Vibrio cholerae RC385]
          Length = 667

 Score = 37.8 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 72/212 (33%), Gaps = 32/212 (15%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQ-CSRDFPFAG--VARKSLLMS 100
           D+ L  + D      +Y    L +     +  A +Y N+            +  +     
Sbjct: 215 DLLLSLLPDYVDPSGIYNDVGLLMGTLGQYESALDYLNKALEYRLEQGNPLLIAQVEHSL 274

Query: 101 AFVQYSAGKYQQAASLGEEYITQY--PES--KNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
               +  G+Y+++    E+    +  P +    + YV+  +G +Y ++   V  DQ    
Sbjct: 275 GDTYFKQGRYEESILYFEQ-AKAHLTPANYLFGLAYVHLGLGKAYIELNNFVEGDQ-HLF 332

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             L+Y++          +       +      LA        +  K  +Y  AI      
Sbjct: 333 QALEYVN---------QHKDQHLQGLIYL--SLAQ-----AHF--KEQKYAQAIDYANQA 374

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           +A  S++           +AY+ LA + EA +
Sbjct: 375 VA-ISESASLPR---IKAQAYLQLAKIAEAEQ 402


>gi|296217074|ref|XP_002754870.1| PREDICTED: prolyl 4-hydroxylase subunit alpha-3 [Callithrix
           jacchus]
          Length = 544

 Score = 37.8 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 28/80 (35%), Gaps = 9/80 (11%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDF--PFAGVA-------RKSLLMSAFVQYSAGKYQ 111
           ++   +     ++  A  +  +    F   +             +L   AF  + AG   
Sbjct: 185 FQVGKVAYDMGDYYHAIPWLEEAVSLFRGSYGEWKTEDEASLEDALDHLAFAYFQAGNVS 244

Query: 112 QAASLGEEYITQYPESKNVD 131
            A SL  E++   P++K + 
Sbjct: 245 CALSLSREFLLYSPDNKRMA 264


>gi|325923961|ref|ZP_08185550.1| hypothetical protein containing a divergent form of TPR repeats
           [Xanthomonas gardneri ATCC 19865]
 gi|325545544|gb|EGD16809.1| hypothetical protein containing a divergent form of TPR repeats
           [Xanthomonas gardneri ATCC 19865]
          Length = 251

 Score = 37.8 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 45/131 (34%), Gaps = 16/131 (12%)

Query: 64  AVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           A   L++ ++++A E +       +         +L  A  QY  G+  +     +  I 
Sbjct: 95  AQTLLEQGDYARAAELYQGALRGIY---QDDPDLMLGLAKAQYGLGQAAETRKTLDALIA 151

Query: 123 QYPESKNVD-YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP-YVKGARF 180
             P  ++ D ++ Y   +           D  + +  L     + + Y      V+ A+ 
Sbjct: 152 ANPNYRSHDGHLLYARAV----------EDSGSIEEALHEYETLAQGYPGEEARVRYAQL 201

Query: 181 YVTVGRNQLAA 191
            +   R Q A 
Sbjct: 202 LLRAARQQEAK 212


>gi|289804499|ref|ZP_06535128.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 194

 Score = 37.8 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 2/62 (3%)

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           A   + +GR Y+ RG+Y  A+   Q V+    D E   E +  L   Y  L    E  E 
Sbjct: 19  ARVSIMMGRVYMARGDYAKAVESLQRVIV--QDKELVSETLEMLQTCYQQLGKNAEWAEF 76

Query: 250 VS 251
           + 
Sbjct: 77  LR 78


>gi|254506313|ref|ZP_05118456.1| type IV pilus biogenesis/stability protein PilW [Vibrio
           parahaemolyticus 16]
 gi|219550793|gb|EED27775.1| type IV pilus biogenesis/stability protein PilW [Vibrio
           parahaemolyticus 16]
          Length = 236

 Score = 37.8 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 40/114 (35%), Gaps = 12/114 (10%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +   +  +   +A C  V   +QS          + R         + +L++ N  KA E
Sbjct: 1   MRSLSFILSLMLAGCVTVDATKQSDPSFNPTERAEARIAL-----GIGYLEQGNMVKARE 55

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQY--SAGKYQQAASLGEEYITQYPESKNV 130
              +     P      ++ L      Y    G+ Q A  + +  + Q+P + NV
Sbjct: 56  NLEKALDHSP-NYY--RAQLSM--AHYFEKVGETQSAEKMYKTALKQHPRNGNV 104


>gi|205352618|ref|YP_002226419.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|205272399|emb|CAR37279.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|326627683|gb|EGE34026.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 371

 Score = 37.8 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 2/62 (3%)

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           A   + +GR Y+ RG+Y  A+   Q V+    D E   E +  L   Y  L    E  E 
Sbjct: 196 ARVSIMMGRVYMARGDYAKAVESLQRVIV--QDKELVSETLEMLQTCYQQLGKNAEWAEF 253

Query: 250 VS 251
           + 
Sbjct: 254 LR 255


>gi|170030859|ref|XP_001843305.1| tetratricopeptide repeat protein 37 [Culex quinquefasciatus]
 gi|167868424|gb|EDS31807.1| tetratricopeptide repeat protein 37 [Culex quinquefasciatus]
          Length = 1231

 Score = 37.8 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 25/55 (45%), Gaps = 6/55 (10%)

Query: 64   AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
                LK + +S+A E F +       +    ++ +  A   + AG+YQ++ +  E
Sbjct: 968  GQCLLKRKLYSEAVECFQKV------SEATYQATVGKALAYFKAGQYQESYAEYE 1016


>gi|90022221|ref|YP_528048.1| molybdopterin converting factor subunit 1 [Saccharophagus degradans
           2-40]
 gi|89951821|gb|ABD81836.1| peptidase M48, Ste24p [Saccharophagus degradans 2-40]
          Length = 503

 Score = 37.8 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 49/131 (37%), Gaps = 13/131 (9%)

Query: 11  IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY---EKAVLF 67
             E    +  K A      +++        ++ R + L           +Y    +A ++
Sbjct: 317 ENELRGNRFSKLAAQYGLVLSLT----RAGKTERALTLAEELVAAEPENIYFTVARADVY 372

Query: 68  LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
            ++ +F  A +   +  +  P    A    L  A V   AG+Y + A L   ++ + P  
Sbjct: 373 AEKGDFETAVKALQEKLKTHP-NHHALNVRL--AEVLMKAGRYNECAELLNRHVQRRPND 429

Query: 128 KNVDYVYYLVG 138
              DYV+YL+ 
Sbjct: 430 ---DYVWYLLA 437


>gi|227111825|ref|ZP_03825481.1| hypothetical protein PcarbP_02612 [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 389

 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 59/180 (32%), Gaps = 28/180 (15%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              ++    + +A E FNQ   +  F   A +  L+      +   +  A  + E+ +  
Sbjct: 114 GRDYMAAGLYDRAEESFNQLVDEEDFRRSALQ-QLLQI--HQATSDWPTAIEVAEKLVKM 170

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
             +   VD  ++   ++   M  D   D       L  +                     
Sbjct: 171 GKDQLRVDIAHFYCELALLAMGSD-DLD-----KALTLL-----------------KKGA 207

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
              +Q A   + +GR Y+ + +Y  A+   + VL    D E   E +  L E Y  L   
Sbjct: 208 TADSQCARASIMMGRIYMAQQDYSRAVESLRQVLE--QDKELVSETLPMLQECYQHLDKP 265


>gi|197362290|ref|YP_002141927.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|207856779|ref|YP_002243430.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|197093767|emb|CAR59241.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|206708582|emb|CAR32903.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|261246898|emb|CBG24715.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|301158236|emb|CBW17735.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
          Length = 371

 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 2/62 (3%)

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           A   + +GR Y+ RG+Y  A+   Q V+    D E   E +  L   Y  L    E  E 
Sbjct: 196 ARVSIMMGRVYMARGDYAKAVESLQRVIV--QDKELVSETLEMLQTCYQQLGKNAEWAEF 253

Query: 250 VS 251
           + 
Sbjct: 254 LR 255


>gi|168703939|ref|ZP_02736216.1| hypothetical protein GobsU_30680 [Gemmata obscuriglobus UQM 2246]
          Length = 420

 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 36/125 (28%), Gaps = 17/125 (13%)

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
             A  +F+   +  P    A   L M A      GK+  A +   EY+   P S      
Sbjct: 173 EAAVAHFDALLKADPQNSWA---LFMRAASNNENGKHDAAIADYTEYLKLSPNSSA---A 226

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
               G  +   I    YD       ++  + +++      Y            N+    E
Sbjct: 227 LNNRGTVW---INKKEYD-----KAIEDFTTVLKADP--KYAVAYSNRGHALLNK-KDYE 275

Query: 194 VEIGR 198
             +  
Sbjct: 276 KAVAD 280


>gi|91201134|emb|CAJ74193.1| unknown protein [Candidatus Kuenenia stuttgartiensis]
          Length = 291

 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 21/57 (36%), Gaps = 3/57 (5%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +     K  N+ +A E +     D   +    +     A  QY  GKY +A    E+
Sbjct: 27  QGNELYKNGNYDQALEKYLNVQVD---SPDVPQLSFNVADTQYKRGKYDEALKSFEK 80


>gi|85860974|ref|YP_463176.1| hypothetical protein SYN_02091 [Syntrophus aciditrophicus SB]
 gi|85724065|gb|ABC79008.1| hypothetical membrane protein [Syntrophus aciditrophicus SB]
          Length = 218

 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/103 (11%), Positives = 35/103 (33%), Gaps = 15/103 (14%)

Query: 11  IFEAWAYQLYKFALTIFFSIAVCFLVGWERQS----------SRDVYLDSVTDVRYQREV 60
           + ++   +       +F +  +C +      +          +    L         R++
Sbjct: 30  MKKSGRKKGTLLLRVLFLNFLLCQMAACTTMTELPPERKPTITLQQSLSFPDYSADDRKL 89

Query: 61  YEKAVLFLKE-----QNFSKAYEYFNQCSRDFPFAGVARKSLL 98
           +E+ +  LK       +++KA + F    +  P +    ++ L
Sbjct: 90  FEEGLNCLKTIPERLPDYTKARKIFETLVQKHPESKWRIQAEL 132


>gi|325529667|gb|EGD06532.1| hypothetical protein B1M_00937 [Burkholderia sp. TJI49]
          Length = 422

 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 60/216 (27%), Gaps = 65/216 (30%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-----------FAG-VARK 95
           +   +  +    + +      K  N+S A  Y+      +P           ++   AR 
Sbjct: 42  VAPTSAQQTAVTLAQHGRTAFKAGNYSLAINYYTAALELYPLVDAFMGRSLAYSAIHARD 101

Query: 96  SLLMSAFV-------------------------QYSAGKYQQAASLGEEYITQYPESKNV 130
                A                            Y + +Y +A ++  E I   P +  +
Sbjct: 102 ESADDAVAAAKIITGTGGNDKLASDLYHLAGLGYYLSDEYDKAIAVYTEAINLAPSNSKI 161

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY--------- 181
              Y     +Y Q +          +  L  + + +     S   K +            
Sbjct: 162 ---YESRADAYKQKLD--------FEHALPDLEKAMALNPKSVSAKDSYAMAFADMGLYQ 210

Query: 182 --VTVGRNQLAAKE------VEIGRYYLKRGEYVAA 209
             +      LAA +      + +G+ Y   G+Y AA
Sbjct: 211 VAIDKLNESLAADKGSSITYMNLGQVYTSMGKYAAA 246


>gi|300813979|ref|ZP_07094272.1| hypothetical protein HMPREF9131_0889 [Peptoniphilus sp. oral taxon
           836 str. F0141]
 gi|300511873|gb|EFK39080.1| hypothetical protein HMPREF9131_0889 [Peptoniphilus sp. oral taxon
           836 str. F0141]
          Length = 523

 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 28/73 (38%), Gaps = 16/73 (21%)

Query: 61  YEKAVLFLKE------QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           Y +AV  L +      +NF+KA E   +              +L  A V Y  G    A 
Sbjct: 342 YIEAVKSLNKVIPQDEKNFTKAGEKLEELED----------IILQKAIVFYQKGDKDNAI 391

Query: 115 SLGEEYITQYPES 127
           SL + YI   P S
Sbjct: 392 SLIKSYIQAEPLS 404


>gi|296226568|ref|XP_002807670.1| PREDICTED: LOW QUALITY PROTEIN: aspartyl/asparaginyl
           beta-hydroxylase-like [Callithrix jacchus]
          Length = 730

 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 23/79 (29%), Gaps = 17/79 (21%)

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
             +   +  +     +V +Y  SP  +  +       + LA K         +R   V  
Sbjct: 324 RKRGKIEEAMNAFKELVRKYPQSPRARYGKA---QCEDDLAEK---------RRSNEV-- 369

Query: 210 IPRFQLVLANYSDAEHAEE 228
               +  +  Y +     +
Sbjct: 370 ---LREAIETYQEVASLPD 385


>gi|195339723|ref|XP_002036466.1| GM11868 [Drosophila sechellia]
 gi|194130346|gb|EDW52389.1| GM11868 [Drosophila sechellia]
          Length = 1136

 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 31/90 (34%), Gaps = 11/90 (12%)

Query: 109 KYQQAASLGEEYITQYPESKNVDYV-YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           +Y +A S  ++Y+     +   ++   Y +G++Y ++        R  K  ++    ++ 
Sbjct: 129 EYSEALSAYQKYLRFRENNYWTNHAFMYGIGVAYFKL--------RCFKWAIKSFQELLY 180

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
              N          + +        E  I 
Sbjct: 181 LSPNFTCANEVHLRLGLMLKHCG--EFHIA 208


>gi|159126891|gb|EDP52007.1| TPR domain protein [Aspergillus fumigatus A1163]
          Length = 748

 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 3/61 (4%)

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           +LK  ++ AA+   + VLA   D++ +E+A+ R  +A   L    E+ E   ++   +P 
Sbjct: 248 FLKTHQFDAALRDLETVLA---DSKPSEKALFRKAQALYHLQRFRESGEAHQVLAREFPS 304

Query: 260 G 260
            
Sbjct: 305 N 305


>gi|123498307|ref|XP_001327376.1| TPR Domain containing protein [Trichomonas vaginalis G3]
 gi|121910304|gb|EAY15153.1| TPR Domain containing protein [Trichomonas vaginalis G3]
          Length = 723

 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 68/232 (29%), Gaps = 39/232 (16%)

Query: 33  CFLVGWERQSSRDVYLDSV-TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
           C +     + +RD YL+++  +      +Y   V+      + +A + F + +R  P   
Sbjct: 408 CLMQSNHEEEARDQYLEAIGVEADCVEALYNLGVVSKMTGQYDEALQVFEKLNRIIP--- 464

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV-PY 150
            A +     +     AG    A       I   P+   +            + I  +   
Sbjct: 465 KAPEVAFEISDCYEKAGMNVNAIEWLHRLINIQPKDPAI-----------WRRIGAIWDR 513

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
           DQ  +    Q      E Y   P       ++              G Y+ K+  Y  A+
Sbjct: 514 DQNES----QAFHCYTESYKFCPSDIDVIQWL--------------GSYFRKKQSYDQAL 555

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQERYPQGY 261
             F+        A      +  +   +  +    EA      ++Q   P   
Sbjct: 556 KFFERAAEL---APKQPRYLMMVASCHRNMDQKQEALAAYEKVMQLD-PNNK 603


>gi|147905822|ref|NP_001086446.1| RNA polymerase-associated protein CTR9 homolog [Xenopus laevis]
 gi|82249387|sp|Q4QR29|CTR9_XENLA RecName: Full=RNA polymerase-associated protein CTR9 homolog;
           AltName: Full=SH2 domain-binding protein 1
 gi|67677972|gb|AAH97638.1| LOC446236 protein [Xenopus laevis]
          Length = 1157

 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 44/278 (15%), Positives = 99/278 (35%), Gaps = 43/278 (15%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
           A L RA    E   +     ++T  +++A  +    E   S  +Y + + +     + Y 
Sbjct: 476 ASLDRAKAEAEHDEHYYNSISVTTSYNLARLYEGLCEFHESEKLYKNILREHPNYVDCYL 535

Query: 63  K-AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           +   +   + NF +A ++F +    ++D P    +    L  A       ++       E
Sbjct: 536 RLGAMARDKGNFYEASDWFKEALQINQDHP-DAWSLIGNLHLA-----KQEWGPGQKKFE 589

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ----RATKLMLQYMSRIVERYTNSP- 173
             + Q P ++N  Y    +G  + Q +     D+    R     L    +++    +S  
Sbjct: 590 RILKQ-PSTQNDTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRN--DSKN 646

Query: 174 ---------------YVKGARFYVTVGRNQLAAKE---VEIGRYYLKRGEYVAAIPRFQL 215
                          YV+ AR      R   A      + +   Y+++ +Y++A+  ++ 
Sbjct: 647 LFAANGIGAVLAHKGYVREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYEN 706

Query: 216 VLANY---SDAEHAEEAMARLVEAYVALALMDEAREVV 250
            L  +    +     E +  L  A      + E ++++
Sbjct: 707 CLRKFYKHQNT----EVLLYLARALFKCGKLQECKQIL 740


>gi|15641379|ref|NP_231011.1| GGDEF family protein [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121728519|ref|ZP_01681542.1| GGDEF family protein [Vibrio cholerae V52]
 gi|147674102|ref|YP_001216926.1| GGDEF family protein [Vibrio cholerae O395]
 gi|153819353|ref|ZP_01972020.1| GGDEF family protein [Vibrio cholerae NCTC 8457]
 gi|227081538|ref|YP_002810089.1| GGDEF family protein [Vibrio cholerae M66-2]
 gi|254848489|ref|ZP_05237839.1| GGDEF domain-containing protein [Vibrio cholerae MO10]
 gi|298498549|ref|ZP_07008356.1| GGDEF family protein [Vibrio cholerae MAK 757]
 gi|9655861|gb|AAF94525.1| GGDEF family protein [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121629183|gb|EAX61623.1| GGDEF family protein [Vibrio cholerae V52]
 gi|126510098|gb|EAZ72692.1| GGDEF family protein [Vibrio cholerae NCTC 8457]
 gi|146315985|gb|ABQ20524.1| GGDEF family protein [Vibrio cholerae O395]
 gi|227009426|gb|ACP05638.1| GGDEF family protein [Vibrio cholerae M66-2]
 gi|227013284|gb|ACP09494.1| GGDEF family protein [Vibrio cholerae O395]
 gi|254844194|gb|EET22608.1| GGDEF domain-containing protein [Vibrio cholerae MO10]
 gi|297542882|gb|EFH78932.1| GGDEF family protein [Vibrio cholerae MAK 757]
          Length = 667

 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 72/212 (33%), Gaps = 32/212 (15%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQ-CSRDFPFAG--VARKSLLMS 100
           D+ L  + D      +Y    L +     +  A +Y N+            +  +     
Sbjct: 215 DLLLSLLPDYVDPSGIYNDVGLLMGTLGQYESALDYLNKALEYRLEQGNPLLIAQVEHSL 274

Query: 101 AFVQYSAGKYQQAASLGEEYITQY--PES--KNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
               +  G+Y+++    E+    +  P +    + YV+  +G +Y ++   V  DQ    
Sbjct: 275 GDTYFKQGRYEESILYFEQ-AKAHLTPANYLFGLAYVHLGLGKAYIELNNFVEGDQ-HLF 332

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             L+Y++          +       +      LA        +  K  +Y  AI      
Sbjct: 333 QALEYVN---------QHKDQHLQGLIYL--SLAQ-----AHF--KEQKYAQAIDYANQA 374

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           +A  S++           +AY+ LA + EA +
Sbjct: 375 VA-ISESASLPR---IKAQAYLQLAKIAEAEQ 402


>gi|332187373|ref|ZP_08389111.1| tetratricopeptide repeat family protein [Sphingomonas sp. S17]
 gi|332012534|gb|EGI54601.1| tetratricopeptide repeat family protein [Sphingomonas sp. S17]
          Length = 316

 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 38/100 (38%), Gaps = 9/100 (9%)

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
             +A  + L   +  ++A +Y +A +  ++ +  YP+S+   +   L+G SY        
Sbjct: 187 GDLAEDAYL-YGYRLWTAKRYAEAETQLKKVVADYPKSRRASFAQNLLGRSY-------- 237

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
            D     L         +++ +      +  Y+     +L
Sbjct: 238 LDSGKPSLASMAFYENYKKFPDGERAPDSLLYLGQALTKL 277



 Score = 35.5 bits (81), Expect = 7.5,   Method: Composition-based stats.
 Identities = 15/108 (13%), Positives = 36/108 (33%), Gaps = 2/108 (1%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
           T   ++A          +S    +D  +      + Y         + +++A     +  
Sbjct: 158 TPAAAVASGDTATGTPAASGAATVDKPSTGDLAEDAYLYGYRLWTAKRYAEAETQLKKVV 217

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQA-ASLGEEYITQYPESKNVD 131
            D+P +  A  +  +       +GK   A  +  E Y  ++P+ +   
Sbjct: 218 ADYPKSRRASFAQNLLGRSYLDSGKPSLASMAFYENY-KKFPDGERAP 264



 Score = 35.1 bits (80), Expect = 9.6,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 36/101 (35%), Gaps = 14/101 (13%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                + ++V  Y  S          +  +N L       GR YL  G+   A   F   
Sbjct: 208 EAETQLKKVVADYPKSR-------RASFAQNLL-------GRSYLDSGKPSLASMAFYEN 253

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
              + D E A +++  L +A   L    +A +V   + + Y
Sbjct: 254 YKKFPDGERAPDSLLYLGQALTKLNKPADACKVYDELTDVY 294


>gi|327539541|gb|EGF26151.1| conserved hypothetical protein, secreted [Rhodopirellula baltica
           WH47]
          Length = 647

 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/113 (14%), Positives = 41/113 (36%), Gaps = 16/113 (14%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK---SLLMSAFVQYSAGKYQQA-ASLGEE 119
           A   L +     A   +N        +G + +   + L  A+    +G+  QA  +  ++
Sbjct: 173 ASGLLDDGQLELAQSTYNMVID----SGDSPQLATARLGLAWCTAMSGEDDQAALTAIDQ 228

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           ++  + E  +V     +      +  +    DQ         + R++ ++ +S
Sbjct: 229 FLKHHSEHADVPSALLMQMSCQFRTGQSESADQT--------LERLLTQHADS 273


>gi|327399104|ref|YP_004339973.1| hypothetical protein Hipma_0945 [Hippea maritima DSM 10411]
 gi|327181733|gb|AEA33914.1| hypothetical protein Hipma_0945 [Hippea maritima DSM 10411]
          Length = 295

 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/114 (12%), Positives = 37/114 (32%), Gaps = 19/114 (16%)

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
             K       + +  Y N+     A +++                 Y+ + E   AI   
Sbjct: 186 DFKQAELLFCKFINSYKNTDLYDNALYWLAYT--------------YIHQNETGKAIKLL 231

Query: 214 QLVLANYSDAEH-----AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           + ++  + +         + A+  L++ Y      D      +L+ +++P   +
Sbjct: 232 KEIIEQFPNGSVDKGGKTDAAIFALIKIYKKQNEKDLEEYYKNLLIKKFPSSRY 285


>gi|319953175|ref|YP_004164442.1| microtubule-severing atpase [Cellulophaga algicola DSM 14237]
 gi|319421835|gb|ADV48944.1| Microtubule-severing ATPase [Cellulophaga algicola DSM 14237]
          Length = 435

 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 33/97 (34%), Gaps = 15/97 (15%)

Query: 64  AVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           A L+++  +F  A +                    +    A   Y  GK   A  L EE 
Sbjct: 23  AKLYMQNGDFDNAEKQLYGCIDLDSTH------TDAKYELANCFYKQGKTSAAEVLLEE- 75

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
           IT+   +       YL  + Y Q+ +D   D + T  
Sbjct: 76  ITKNSNNIT-----YLELLCYCQLNQDNYNDAQDTYK 107


>gi|325105788|ref|YP_004275442.1| alpha-2-macroglobulin domain protein [Pedobacter saltans DSM 12145]
 gi|324974636|gb|ADY53620.1| alpha-2-macroglobulin domain protein [Pedobacter saltans DSM 12145]
          Length = 1940

 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 15/85 (17%)

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           QA ++ E    QY  S  +  + Y   + Y +M  +V                I+  +  
Sbjct: 291 QALNIIE---KQYSSSLVIADIRYQKALIYERMQDNVT--------AYALFQDIINLFPE 339

Query: 172 SPYVKGARFYVTVGRNQLAAKEVEI 196
           S   K A+  V   R     KE+ I
Sbjct: 340 SNTAKNAKVKVFQLR----KKELNI 360


>gi|331685187|ref|ZP_08385773.1| cellulose synthase operon protein C [Escherichia coli H299]
 gi|331077558|gb|EGI48770.1| cellulose synthase operon protein C [Escherichia coli H299]
          Length = 1157

 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 78/236 (33%), Gaps = 36/236 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A    K+  + +A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALEKQGKWVQAAALQRQRLALAPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197
             Q +       +  +V R   S  V      +   G+   A             ++ + 
Sbjct: 557 RAQWS-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 611 DWAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 663



 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 64/210 (30%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 413 RMDSSNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYV--AAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +         K+G++V  AA+ R +L LA    +        RL +    
Sbjct: 459 LQ--NDRLAQQ----AEALEKQGKWVQAAALQRQRLALA--PGSVWIT---YRLSQDLWQ 507

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + ++ P      Y   L
Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537


>gi|53771848|gb|AAU93523.1| ubiquitously transcribed tetratricopeptide repeat protein [Canis
           lupus familiaris]
          Length = 1327

 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 38/141 (26%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 88  EDYPKALSAYQRYYSL-----QTDYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 134

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198
             ++    +    K     + +               QLA              +  I  
Sbjct: 135 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALMDCNPCTLSSVEIQFHIAH 194

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 195 LYETQRKYHSAKEAYEQLLQT 215


>gi|46399087|gb|AAS92205.1| tetratricopeptide repeat protein [Canis lupus familiaris]
          Length = 1425

 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 38/141 (26%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 88  EDYPKALSAYQRYYSL-----QTDYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 134

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198
             ++    +    K     + +               QLA              +  I  
Sbjct: 135 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALMDCNPCTLSSVEIQFHIAH 194

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 195 LYETQRKYHSAKEAYEQLLQT 215


>gi|294673477|ref|YP_003574093.1| hypothetical protein PRU_0734 [Prevotella ruminicola 23]
 gi|294473988|gb|ADE83377.1| tetratricopeptide repeat protein [Prevotella ruminicola 23]
          Length = 217

 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 55/160 (34%), Gaps = 15/160 (9%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYF 80
               +F ++        + + S  V ++ +       E+  +KA   +  Q +  A + +
Sbjct: 1   MIAAMFVALGAAAQTPKQWRDSVSVLIEQINLTPNNLELRLKKAEANINLQQYEYARDEY 60

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
           +   +          +L   AF Q    +Y  A +  E ++   PE          +G++
Sbjct: 61  SAVLKKD---EKNLAALYFRAFCQTQLRQYSFARADYEAFLAIQPEHLEA-----RLGLA 112

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +   +     D          ++R V+ + +S     AR 
Sbjct: 113 HVLQLLGRKTD------AADELNRAVQMFPDSTDAYAARA 146


>gi|255534578|ref|YP_003094949.1| TPR repeat-containing protein [Flavobacteriaceae bacterium 3519-10]
 gi|255340774|gb|ACU06887.1| TPR repeat-containing protein [Flavobacteriaceae bacterium 3519-10]
          Length = 569

 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/123 (13%), Positives = 41/123 (33%), Gaps = 11/123 (8%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
             +  +     +    ++  A  + + +N++ A   + + S   P    A  +     + 
Sbjct: 436 EQLKKEVAEKPQDTDALFRLANAYQEAENWNGAILTWQKMSGLLP--DWAP-AYYSQGYA 492

Query: 104 QYSAGKYQQAASLGEEYITQ-YPESKNV-----DYVYYLVGMSYAQMIRDVPYDQRATKL 157
              AG  + A    E++I+   P  +        Y Y+   ++Y     D    +     
Sbjct: 493 YQQAGNSELAKIAYEKFISTVKPADREANKEILSYAYF--AVAYLVKDSDPVKAKNYASQ 550

Query: 158 MLQ 160
            +Q
Sbjct: 551 SVQ 553


>gi|254286181|ref|ZP_04961141.1| GGDEF family protein [Vibrio cholerae AM-19226]
 gi|150423850|gb|EDN15791.1| GGDEF family protein [Vibrio cholerae AM-19226]
          Length = 667

 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 72/212 (33%), Gaps = 32/212 (15%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQ-CSRDFPFAG--VARKSLLMS 100
           D+ L  + D      +Y    L +     +  A +Y N+            +  +     
Sbjct: 215 DLLLSLLPDYVDPSGIYNDVGLLMGTLGQYESALDYLNKALEYRLEQGNPLLIAQVEHSL 274

Query: 101 AFVQYSAGKYQQAASLGEEYITQY--PES--KNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
               +  G+Y+++    E+    +  P +    + YV+  +G +Y ++   V  DQ    
Sbjct: 275 GDTYFKQGRYEESILYFEQ-AKAHLTPANYLFGLAYVHLGLGKAYIELNNFVEGDQ-HLF 332

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             L+Y++          +       +      LA        +  K  +Y  AI      
Sbjct: 333 QALEYVN---------QHKDQHLQGLIYL--SLAQ-----AHF--KEQKYAQAIDYANQA 374

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           +A  S++           +AY+ LA + EA +
Sbjct: 375 VA-ISESASLPR---IKAQAYLQLAKIAEAEQ 402


>gi|317061865|ref|ZP_07926350.1| conserved hypothetical protein [Fusobacterium sp. D12]
 gi|313687541|gb|EFS24376.1| conserved hypothetical protein [Fusobacterium sp. D12]
          Length = 145

 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 34/76 (44%), Gaps = 8/76 (10%)

Query: 70  EQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           ++++  A  +F +  +                A+V Y   KY++A    E+ +   P S 
Sbjct: 11  KKDYDMAVYFFEKLMKLDATNGNWPGF----LAYVYYEQEKYKKAIPYFEKSVDLSPNSP 66

Query: 129 NVDYVYYLVGMSYAQM 144
            +   Y+L+G SY+++
Sbjct: 67  FI---YFLLGNSYSRL 79


>gi|302785157|ref|XP_002974350.1| hypothetical protein SELMODRAFT_149863 [Selaginella moellendorffii]
 gi|300157948|gb|EFJ24572.1| hypothetical protein SELMODRAFT_149863 [Selaginella moellendorffii]
          Length = 1041

 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 66/209 (31%), Gaps = 33/209 (15%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           K  L L + ++ + ++ F       P       +LL  A  Q++ G++Q++  L +  + 
Sbjct: 132 KGQLLLAKGDYEQMFDVFKIVLDVRPDN---LLALLGQACAQFNRGRFQESLGLYKRVLQ 188

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS---------- 172
            +P       V   +G    ++               Q   R+++    +          
Sbjct: 189 MHPGCPAS--VRLGLGFCRYRL--------GQLSKARQAFQRVLQLDPENLDALVALGIM 238

Query: 173 -PYVKGARFYVTVGRNQLAAKEV---------EIGRYYLKRGEYVAAIPRFQLVLANYSD 222
                 A       +  L A E+          +  +Y    ++       +  LA+  +
Sbjct: 239 DINANDAESVQEGTKKMLEAFEIYPYCATALNHLANHYFYTEQHGVVEQLMETALASTDN 298

Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVS 251
           A    ++   L  +Y +    D+A     
Sbjct: 299 ALIKSQSYFNLARSYHSKGDYDKAAAYYR 327


>gi|297689698|ref|XP_002822285.1| PREDICTED: prolyl 4-hydroxylase subunit alpha-3-like [Pongo abelii]
          Length = 544

 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 11/81 (13%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDF--PFAGVA-------RKSLLMSAFVQYSAGKYQ 111
           ++   +     ++  A  +  +    F   +             +L   AF  + AG   
Sbjct: 185 FQVGKVAYDMGDYYHAIPWLEEAVSLFRGSYGEWKTEDEASLEDALDHLAFAYFQAGNIS 244

Query: 112 QAASLGEEYITQY-PESKNVD 131
            A SL  E++  Y P++K + 
Sbjct: 245 CALSLSREFL-LYSPDNKRMA 264


>gi|253702402|ref|YP_003023591.1| hypothetical protein GM21_3814 [Geobacter sp. M21]
 gi|251777252|gb|ACT19833.1| TPR repeat-containing protein [Geobacter sp. M21]
          Length = 615

 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 41/108 (37%), Gaps = 7/108 (6%)

Query: 35  LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94
           L    +++       +  +     + Y+++   + + +   A++   +    +P    A 
Sbjct: 441 LTALRQRTEEPQPPAAKDEDLAAEDRYQRSQELVSQGDLDGAFQELKEILLSYP--DFAP 498

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPES----KNVDYVYYLVG 138
            +    A + Y  G  +QA +  E+     P +    KN+   Y++ G
Sbjct: 499 -AHNDLAVLAYQQGDKEQARAHYEKAAELAPGNGTFQKNLADFYFVEG 545


>gi|238897412|ref|YP_002923089.1| putative periplasmic protein contains a protein prenylyltransferase
           domain [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|229465167|gb|ACQ66941.1| putative periplasmic protein contains a protein prenylyltransferase
           domain [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 257

 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/149 (14%), Positives = 53/149 (35%), Gaps = 9/149 (6%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
             +R   + +      +++ Y+ A+ F  ++++  +A         ++  +     +   
Sbjct: 117 NKNRATKVATPESKNNEKKDYDAALFFIFEKKDDDQAIIKLQHFVEEYSESIYRPNAYYW 176

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
              + Y+ G   +A+      + +Y +S         VGM        +  +   T    
Sbjct: 177 LGQLFYNKGMKNKASYYYAVLVKKYHKSPKRPDAMLKVGM--------IMQETGKTDKAK 228

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           Q   R++E Y  S   K A+  +   + +
Sbjct: 229 QIYQRVIEEYPLSAAKKEAQKKLNAAKKK 257


>gi|168704791|ref|ZP_02737068.1| expressed protein [Gemmata obscuriglobus UQM 2246]
          Length = 285

 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/154 (10%), Positives = 41/154 (26%), Gaps = 29/154 (18%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY--- 77
           +    + F++  C L    ++      L          ++  +    ++++ ++K     
Sbjct: 2   RLCTAVVFALCACALGAGGQEKKDKEEL---------TKLLGEIKSLMQDRKYAKVIPLA 52

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
           +   +     P    A      +A       ++ +A     ++I   PE           
Sbjct: 53  KKAAELDPTNPGPPFA------AANAHAELRQHAEAVKAWSQFIKLVPEEAKA------- 99

Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
                    D    Q   K  L      ++    
Sbjct: 100 ----YDARGDAQLKQGNFKEALADFDEYLKHNPK 129


>gi|162453725|ref|YP_001616092.1| hypothetical protein sce5449 [Sorangium cellulosum 'So ce 56']
 gi|161164307|emb|CAN95612.1| hypothetical protein predicted by Glimmer/Critica [Sorangium
           cellulosum 'So ce 56']
          Length = 274

 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 11/69 (15%), Positives = 27/69 (39%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++A   L   + +      +     FP + +  ++ ++        G   +AA LG+ ++
Sbjct: 193 DRARDALTAGDAAGCLAALDAHDSKFPRSAMGEEATVLRIEALIRLGDRARAAELGQRFL 252

Query: 122 TQYPESKNV 130
              P S + 
Sbjct: 253 ASRPTSAHA 261


>gi|152980764|ref|YP_001354355.1| tetratricopeptide repeat protein [Janthinobacterium sp. Marseille]
 gi|151280841|gb|ABR89251.1| N-acetylglucosaminyl transferase [Janthinobacterium sp. Marseille]
          Length = 391

 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 22/57 (38%), Gaps = 4/57 (7%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           YE    +L      +A E FNQ      +   AR++LL          ++++A    
Sbjct: 112 YELGQDYLNAGLLDRAEETFNQLVDTQ-YGAQARRALLEI---YQREKEWERAIQAA 164


>gi|119468598|ref|ZP_01611650.1| Beta-lactamase class C family protein [Alteromonadales bacterium
           TW-7]
 gi|119447654|gb|EAW28920.1| Beta-lactamase class C family protein [Alteromonadales bacterium
           TW-7]
          Length = 469

 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 3/73 (4%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           + VY D+       R + E  +  L  +++++A++ F      FP    A ++    AF 
Sbjct: 373 KQVYKDNGYSRFIGRTINEVGMELLSTKSWTEAFDMFEYLVSLFPN---APQAYDSLAFA 429

Query: 104 QYSAGKYQQAASL 116
             S G  + A S 
Sbjct: 430 YLSKGDSEAAKST 442


>gi|75911090|ref|YP_325386.1| hypothetical protein Ava_4894 [Anabaena variabilis ATCC 29413]
 gi|75704815|gb|ABA24491.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
          Length = 156

 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 18/113 (15%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +++   L     ++A     Q  ++ P FA    R++ L      YS G+YQ++ +  + 
Sbjct: 45  DQSQKLLDAGEITEAEVMLTQLIQEQPDFAEAWNRRAFL-----YYSMGEYQKSLADCQM 99

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
            I   P         + +G+ YA + +            ++   R +E    S
Sbjct: 100 VIQINPVHFG---ALHGIGLCYAALGKYA--------KAIKAFKRALEIQPYS 141


>gi|46199597|ref|YP_005264.1| hypothetical protein TTC1295 [Thermus thermophilus HB27]
 gi|46197223|gb|AAS81637.1| hypothetical protein TT_C1295 [Thermus thermophilus HB27]
          Length = 453

 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 30/81 (37%), Gaps = 7/81 (8%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           E+    L E  +++A   F +  R   +     ++ L         G+ ++A    ++  
Sbjct: 28  ERGERLLSEGAYAEAVAAFEEVLRQD-YGQF--QAHLGLGVALVRLGRLEEARFAFDQMT 84

Query: 122 TQYP----ESKNVDYVYYLVG 138
             +P       N+  VY  +G
Sbjct: 85  RVFPDRYEGHFNLGQVYLRMG 105


>gi|17230729|ref|NP_487277.1| hypothetical protein all3237 [Nostoc sp. PCC 7120]
 gi|17132332|dbj|BAB74936.1| all3237 [Nostoc sp. PCC 7120]
          Length = 156

 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 18/113 (15%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +++   L     ++A     Q  ++ P FA    R++ L      YS G+YQ++ +  + 
Sbjct: 45  DQSQKLLDAGEITEAEVMLTQLIQEQPDFAEAWNRRAFL-----YYSMGEYQKSLADCQM 99

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
            I   P         + +G+ YA + +            ++   R +E    S
Sbjct: 100 VIQINPVHFG---ALHGIGLCYAALGKYA--------KAIKAFKRALEIQPYS 141


>gi|16331197|ref|NP_441925.1| hypothetical protein slr1939 [Synechocystis sp. PCC 6803]
 gi|1653691|dbj|BAA18603.1| slr1939 [Synechocystis sp. PCC 6803]
          Length = 669

 Score = 37.4 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 3/67 (4%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +K +  L+ Q +  A E      R  P   +    K+ +       + G++ Q+  + E 
Sbjct: 11  QKGLKALQNQEYQSAIEALEMVCRRVPQQESPEFLKAQMALVRAYRAIGRFDQSREICE- 69

Query: 120 YITQYPE 126
           Y+T+ P 
Sbjct: 70  YLTRNPN 76


>gi|323448338|gb|EGB04238.1| hypothetical protein AURANDRAFT_72573 [Aureococcus anophagefferens]
          Length = 1054

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 58/153 (37%), Gaps = 32/153 (20%)

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY-TNSPYVKGARFYVTV 184
            +K++D    L  ++ A     +  D  A K  L++    +ERY      V  A   +  
Sbjct: 773 TNKHIDQ---LRKLTKAIQDARISRDNEAIKQSLKFYDEALERYIP----VLMAMARIYW 825

Query: 185 ------GRNQL--------AAKE---VEIGR-YYLKRGEYVAAIPRFQLVL----ANYSD 222
                    +L        +  E   + +   ++++  ++  AI  +  ++     N  D
Sbjct: 826 DKENYPMVERLFRQSAEFCSEHEVWKLNVAHVFFMQESKFKEAIRYYDPIVKKKSENILD 885

Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
                  +A L  +Y+  +  +EA E++  I++
Sbjct: 886 VPAI--VLANLCVSYIMTSQNEEAEELMRKIEK 916


>gi|310821065|ref|YP_003953423.1| transglycosylase slt domain-containing protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|309394137|gb|ADO71596.1| Transglycosylase SLT domain protein [Stigmatella aurantiaca
           DW4/3-1]
          Length = 806

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 26/58 (44%)

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           E + + +R+FP    A  +L  +A +     +  QA +  EE    YP++  +    +
Sbjct: 391 ETYERLAREFPGHSFADDALFYAADLYVKTNQLDQALARLEELERNYPKADFLGEALF 448



 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 8/50 (16%), Positives = 23/50 (46%)

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           ++ +   +     A++A+    + YV    +D+A   +  ++  YP+  +
Sbjct: 393 YERLAREFPGHSFADDALFYAADLYVKTNQLDQALARLEELERNYPKADF 442


>gi|300936489|ref|ZP_07151409.1| tetratricopeptide repeat protein [Escherichia coli MS 21-1]
 gi|300458411|gb|EFK21904.1| tetratricopeptide repeat protein [Escherichia coli MS 21-1]
          Length = 248

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/155 (12%), Positives = 47/155 (30%), Gaps = 23/155 (14%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS--LLMSAFVQYS 106
           + +      +  Y  A    +   + +A  ++ Q          A ++  +L  A  Q++
Sbjct: 78  EELAIAETNQNHYALANELARLGRYHEAVPHYQQALS----GIFAHEAVMMLSLAQAQFA 133

Query: 107 AGKYQQAASLGEEYITQYPESKNVD-YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
             ++       E+ +   P+ ++ D ++ +   ++           Q            +
Sbjct: 134 IQEFAACQQTLEDVMRYNPDFQSADGHLLFARALA----------AQEKYADAESEFEVL 183

Query: 166 VERYTNSP---YVKGARFYVTVGRNQLAAKEVEIG 197
           V  Y       Y       ++  R    A E  I 
Sbjct: 184 VSYYPGPQARIYYAEMLAKMSRLRE---ANEQYIA 215


>gi|296127253|ref|YP_003634505.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
 gi|296019069|gb|ADG72306.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
          Length = 946

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/137 (10%), Positives = 35/137 (25%), Gaps = 38/137 (27%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSV---TDVRYQREVYEKAVLFL------- 68
           + K  +     I++  L       + +  +D      +  + ++ Y  A           
Sbjct: 1   MKKLLIIFSIFISLSSLFAQNVAPNDERNIDREFYNAEKLFFQKKYNFAREAFLLYLKRR 60

Query: 69  -----------------KEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAG 108
                            +++ +  A +Y+      +  + +           A   Y   
Sbjct: 61  PLSTNDMLYYYIGACYFQDKQYQNAIDYYKLAFDINDSYSYCN-------NIANSYYQLK 113

Query: 109 KYQQAASLGEEYI-TQY 124
            Y+ A       I   Y
Sbjct: 114 NYEDALLWYNRSIERLY 130


>gi|291569425|dbj|BAI91697.1| TPR domain protein [Arthrospira platensis NIES-39]
          Length = 275

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 70/223 (31%), Gaps = 41/223 (18%)

Query: 24  LTIFFSIAVCFL---------VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
           L +F ++  C+L         + W    +    +  ++      E+ E+A    +   F 
Sbjct: 4   LILFLTVVFCWLWLGVVSPYNLAWAATETVGETVAEIS-TLSLDELLERAFSTSQAGRFP 62

Query: 75  KAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
           +A  Y+ +    +P      + +  +       S  +  +A       I   P       
Sbjct: 63  EAESYWTEIINRYPDNPAMWSNRGNVRV-----SQNRLTEAIGDYNRAIELAPT---AAD 114

Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
            Y   G++Y  + R            +   +R +E          A  Y   G  +   K
Sbjct: 115 AYLNRGVAYEGLGRWSD--------AIADYNRTLELSP-----SDAIAYNNRGNAEAGQK 161

Query: 193 --EVEIGRYYLKRG---EYVAAIPRFQLVLANYSDAEHAEEAM 230
             E  I  Y+        Y  A  R    LA Y ++   +EA+
Sbjct: 162 NWEAAIADYFQAAELDPNY--AFARANYALALY-ESGETKEAI 201



 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 28/72 (38%), Gaps = 9/72 (12%)

Query: 62  EKAVLFLKEQNFSKAY-EYFNQ--CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
            +      ++N+  A  +YF       ++ F      +    A   Y +G+ ++A    +
Sbjct: 152 NRGNAEAGQKNWEAAIADYFQAAELDPNYAF------ARANYALALYESGETKEAIRNIK 205

Query: 119 EYITQYPESKNV 130
             I +YP   ++
Sbjct: 206 NLIRKYPNFADM 217


>gi|219111917|ref|XP_002177710.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217410595|gb|EEC50524.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 977

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 41/125 (32%), Gaps = 32/125 (25%)

Query: 50  SVTDVRYQREVYEKAVL---------------FLKEQNFSKAYEYFN---QCSRDFPFAG 91
              D+R  R++Y+ A+                   E+N+++A   F    +  R      
Sbjct: 619 EANDIRRARQLYKAALDVDPRSSVAWLQLGVMEADEENWNEAETCFETALKFDRR----- 673

Query: 92  VARKSLLMSAFVQYS----AGKYQQAASLGEEYITQYPESKNV--DYVYYLVGMSYAQMI 145
               S L+ A+         G  ++A  L E  +   P    V   Y  Y+  +      
Sbjct: 674 ---NSRLLQAYALMETKRPNGNSRKAIGLLERALKANPRDAGVLQAYALYVAELGDVDAA 730

Query: 146 RDVPY 150
           RD+  
Sbjct: 731 RDLLR 735


>gi|171915884|ref|ZP_02931354.1| TPR domain protein [Verrucomicrobium spinosum DSM 4136]
          Length = 596

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 66/198 (33%), Gaps = 34/198 (17%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF------VQYSAGKYQQAA 114
           Y +A+   +   ++ A + F Q SR       A   LL   F          + ++  AA
Sbjct: 386 YHRAIALTQGDKYADAAKLFEQASRQAETNA-AE--LLDDQFHFHWGVALERSRQFDAAA 442

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
              E+ IT  P   +          +    +  +  DQ      L    +++ +      
Sbjct: 443 RQFEKSITLTPAH-DPP-----RAANTMNYLGYMWLDQG---QHLDKAEQLIRK------ 487

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP---RFQLVLANYSDAEHAEEAMA 231
                       + L       G    KRG+   A+    R + ++  +SD+    E + 
Sbjct: 488 ANELEQNNPAFVDSL-------GWLLFKRGKAKEALTELLRAEHLMKEFSDSGADAEILD 540

Query: 232 RLVEAYVALALMDEAREV 249
            + +AY  L   ++A+  
Sbjct: 541 HIAQAYEQLGQTEDAKSY 558


>gi|153212744|ref|ZP_01948401.1| GGDEF family protein [Vibrio cholerae 1587]
 gi|153828784|ref|ZP_01981451.1| GGDEF family protein [Vibrio cholerae 623-39]
 gi|124116394|gb|EAY35214.1| GGDEF family protein [Vibrio cholerae 1587]
 gi|148875737|gb|EDL73872.1| GGDEF family protein [Vibrio cholerae 623-39]
          Length = 667

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 72/212 (33%), Gaps = 32/212 (15%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQ-CSRDFPFAG--VARKSLLMS 100
           D+ L  + D      +Y    L +     +  A +Y N+            +  +     
Sbjct: 215 DLLLSLLPDYVDPSGIYNDVGLLMGTLGQYESALDYLNKALEYRLEQGNPLLIAQVEHSL 274

Query: 101 AFVQYSAGKYQQAASLGEEYITQY--PES--KNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
               +  G+Y+++    E+    +  P +    + YV+  +G +Y ++   V  DQ    
Sbjct: 275 GDTYFKQGRYEESILYFEQ-AKAHLTPANYLFGLAYVHLGLGKAYIELNNFVEGDQ-HLF 332

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             L+Y++          +       +      LA        +  K  +Y  AI      
Sbjct: 333 QALEYVN---------QHKDQHLQGLIYL--SLAQ-----AHF--KEQKYAQAIDYANQA 374

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           +A  S++           +AY+ LA + EA +
Sbjct: 375 VA-ISESASLPR---IKAQAYLQLAKIAEAEQ 402


>gi|169863459|ref|XP_001838351.1| ADP/ATP carrier receptor [Coprinopsis cinerea okayama7#130]
 gi|116500644|gb|EAU83539.1| ADP/ATP carrier receptor [Coprinopsis cinerea okayama7#130]
          Length = 606

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 38/114 (33%), Gaps = 20/114 (17%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
               Y +  +     +F KA E + +       F F+       +  A  QY AG    +
Sbjct: 394 PDIYYHRGQVLFIMSDFDKAAEDYTKSTELDDQFVFSH------IQLAVAQYKAGNIANS 447

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +     +  +P+       YY           ++  DQ+  +  ++   R +E
Sbjct: 448 MAQFRRTMKAFPQRSE-PQNYY----------GELLLDQQRYQDAVEKFDRAIE 490


>gi|73542251|ref|YP_296771.1| hypothetical protein Reut_A2566 [Ralstonia eutropha JMP134]
 gi|72119664|gb|AAZ61927.1| TPR repeat [Ralstonia eutropha JMP134]
          Length = 407

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 31/84 (36%), Gaps = 8/84 (9%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             + +   +  +YE    FL+     +A E   +     P+A  A++ LL          
Sbjct: 100 PDLPEPEREHALYELGQDFLRAGLLDRAEESLRRLMS-GPYAASAKRVLLEL---YEVEK 155

Query: 109 KYQQAASLGEEYITQYPESKNVDY 132
           ++Q+A     E        +N DY
Sbjct: 156 EWQKAIDAARELQAL----ENKDY 175


>gi|118581822|ref|YP_903072.1| hypothetical protein Ppro_3422 [Pelobacter propionicus DSM 2379]
 gi|118504532|gb|ABL01015.1| TPR repeat-containing protein [Pelobacter propionicus DSM 2379]
          Length = 713

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 56/185 (30%), Gaps = 37/185 (20%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +EV+  A   L + N S+A E F Q +       +   +L       Y   KY QA S  
Sbjct: 202 QEVFLAAEAALYKGNLSEAEEGFAQFTSRK--TAIQPLALYRLGETHYKLQKYSQALSSF 259

Query: 118 EE-------YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
            E       ++   P             +++      +             +S ++ R  
Sbjct: 260 REAEKLWPAFLNLNP------------AVTFY-YGDSIARG-GDLSAARSLLSGLIARLA 305

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
              +       +     +    E E             A+  ++ V  N+ D +    AM
Sbjct: 306 EKKFAPVLLVRMADILVRQ-GHEQE-------------ALGVYRTVSENFRDNKATWIAM 351

Query: 231 ARLVE 235
            RL +
Sbjct: 352 LRLKD 356


>gi|186686820|ref|YP_001870013.1| WD-40 repeat-containing protein [Nostoc punctiforme PCC 73102]
 gi|186469172|gb|ACC84972.1| WD-40 repeat protein [Nostoc punctiforme PCC 73102]
          Length = 2172

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 69/226 (30%), Gaps = 55/226 (24%)

Query: 55   RYQREVY---EKAVLFLKEQNFSKAYEYF-NQCS--RDFPFAGVARKSLLMSAFVQYSAG 108
             ++ + Y   E    +    NF+KA   +         + +  +   SL     V  S G
Sbjct: 1477 DHENQAYMLRELGNAYYCLGNFTKAIASYSQSLENASKYNYLQIELNSLSNLGRVYNSLG 1536

Query: 109  KYQQAASLGEEYIT---QY--PESKNVD------YVYYLVGMSYAQMIRDVPYDQRATKL 157
             Y  A     E +     +  P++K  D      Y YY                + A+K 
Sbjct: 1537 DYDIAIKYYNEALKILDMHDAPQNK-TDVLRGRGYAYYQ-----------NNKLEEASKD 1584

Query: 158  MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
             LQ +            +      V       A  +V +   Y   G++  AI  ++  L
Sbjct: 1585 YLQALD-----------IDEKNKNVAGI----AINKVNLANIYFYLGDFFQAIQYYREAL 1629

Query: 218  ANYSDAEHAEEAMARLVEAYVALALMDEARE------VVSLIQERY 257
                      EA+A L   Y+A     +A +        +   E Y
Sbjct: 1630 EFSPS-----EALAGLGNIYLAFGDTAKAVDLHQQSLAKAQQDENY 1670


>gi|322694969|gb|EFY86786.1| DNAJ domain containing protein [Metarhizium acridum CQMa 102]
          Length = 696

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 33/82 (40%), Gaps = 4/82 (4%)

Query: 50  SVTDVRYQREVYEKA-VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
            V       E Y+ A   F K++N++KA E +++    FP +      L   A  + S G
Sbjct: 189 PVPTALDDAEAYKAAGNRFFKDKNYTKAIEQYSKAVDLFPDSP---TYLSNRAAARMSNG 245

Query: 109 KYQQAASLGEEYITQYPESKNV 130
           +Y  A           P++  +
Sbjct: 246 QYAAALEDCSRAADLDPQNSKI 267


>gi|294866079|ref|XP_002764601.1| Hsc70-interacting protein, putative [Perkinsus marinus ATCC 50983]
 gi|239864162|gb|EEQ97318.1| Hsc70-interacting protein, putative [Perkinsus marinus ATCC 50983]
          Length = 380

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 21/149 (14%), Positives = 55/149 (36%), Gaps = 20/149 (13%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG----VARKSLL 98
            +D+  D +     Q  + ++AV  +++ +  KA E + +              AR++ +
Sbjct: 123 DKDLNDDEMDQ---QAGLKQEAVEAMEDGDLEKALEKYTKAINI--GGATALLFARRAAV 177

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR--DVPYDQRATK 156
           +         +   A +  +  +   P+S      Y + G++  ++ R  +   D  A +
Sbjct: 178 LL-----KLRRPLAAMNDADAALKLNPDSGR---AYRIRGVANRRLQRWEEAHSDLAAAQ 229

Query: 157 L-MLQYMSRIVERYTNSPYVKGARFYVTV 184
                  +  + R+ +  + K A+     
Sbjct: 230 NIDFDEATEEIHRFVDEKWSKIAQLRRDY 258


>gi|209920990|ref|YP_002295074.1| cellulose synthase subunit BcsC [Escherichia coli SE11]
 gi|209914249|dbj|BAG79323.1| putative cellulose synthase [Escherichia coli SE11]
 gi|324021167|gb|EGB90386.1| tetratricopeptide repeat protein [Escherichia coli MS 117-3]
          Length = 1157

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 77/237 (32%), Gaps = 38/237 (16%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQY-PESKNVDYVY--YLVG-------MSYAQMIRDV 148
             +   + AG+  QA       + Q+ P      Y Y  YL G       +++   I  +
Sbjct: 500 RLSQDLWQAGQRSQA-DTLMRNLAQHKPNDPEQVYAYGLYLSGHDQDRAALAH---INSL 555

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEI 196
           P  Q         +  +V R   S  V      +   G+   A             ++ +
Sbjct: 556 PRAQWN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTL 609

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
             +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 610 ADWAQQRRDYTAARAAYQNVLTREP---ANADAILGLTEVDIAAGDKAAARSQLAKL 663



 Score = 35.9 bits (82), Expect = 6.1,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 60/210 (28%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + +  P      Y   L
Sbjct: 508 AGQRSQADTLMRNLAQHKPNDPEQVYAYGL 537


>gi|111224569|ref|YP_715363.1| hypothetical protein FRAAL5188 [Frankia alni ACN14a]
 gi|111152101|emb|CAJ63828.1| hypothetical protein; putative TPR domains [Frankia alni ACN14a]
          Length = 147

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 45/111 (40%), Gaps = 14/111 (12%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y + +  L   + + A +         P +   R++       Q+SAG+Y  A       
Sbjct: 33  YTRGMALLGHGDANAAVQLLAHAVAAEPASPSVREA---LGRAQFSAGQYVAARETFAWI 89

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           + ++P     DY  + +G+S A+ I D+       +  +++++  V    +
Sbjct: 90  VDRHPTD---DYAQFGLGLS-ARKIGDL-------RAAVEHLALAVAMRPD 129


>gi|160879337|ref|YP_001558305.1| peptidase S41 [Clostridium phytofermentans ISDg]
 gi|160428003|gb|ABX41566.1| peptidase S41 [Clostridium phytofermentans ISDg]
          Length = 897

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 18/149 (12%), Positives = 50/149 (33%), Gaps = 19/149 (12%)

Query: 39  ERQSSRDVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARK 95
           + Q + D+Y +++   +   ++ Y  A  +     + +A +Y  +   + +  +     K
Sbjct: 395 DSQKAEDLYKNALEKNQDDYDLLYSVAEFYQDNGKYDEAIQYAERAINTDESEYKAYGIK 454

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +        +  G+ Q+A    +       ++ +    YY  G  Y              
Sbjct: 455 AQ-----TFFWQGEKQKAIDTIDLMTRNNLQNAD---AYYAAGNLYMNEYE--------Y 498

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTV 184
           K  ++   +++E    + Y    +     
Sbjct: 499 KFAVENYDKVLEMNPLNEYACIGKIRALY 527


>gi|22298629|ref|NP_681876.1| hypothetical protein tll1085 [Thermosynechococcus elongatus BP-1]
 gi|22294809|dbj|BAC08638.1| tll1085 [Thermosynechococcus elongatus BP-1]
          Length = 689

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/96 (12%), Positives = 24/96 (25%), Gaps = 22/96 (22%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS----- 115
           Y   +      ++  A   F              K+ L          ++Q+A       
Sbjct: 14  YVAGLAAFNRGDYQLAIAAFKAVIASHGQRREGLKAHLHLIKAYAYTHQWQEAIELCQLL 73

Query: 116 -----------------LGEEYITQYPESKNVDYVY 134
                              E Y+ + P S ++ +V 
Sbjct: 74  ARSPVVPIRTWAQKHLPELERYMDEEPTSPHLVFVM 109


>gi|307258932|ref|ZP_07540663.1| UDP-N-acetylglucosamine-peptide-n- acetylglucosaminyltransferase
           [Actinobacillus pleuropneumoniae serovar 11 str. 56153]
 gi|306866956|gb|EFM98813.1| UDP-N-acetylglucosamine-peptide-n- acetylglucosaminyltransferase
           [Actinobacillus pleuropneumoniae serovar 11 str. 56153]
          Length = 495

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 61/179 (34%), Gaps = 30/179 (16%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL-----KEQNFSKAYEYFNQCSRDFPFA 90
           +G + +    +      +     EVY +A + L     ++  F +A   FN  SR+    
Sbjct: 7   LGKQGKVDEAIVAYRNVNREDSAEVYVRAQINLGITLGEQGKFDEAIAAFNNVSREDSTE 66

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD--Y--VYYLVGMSYAQMIR 146
             A  + +         G+  +A         +    ++    Y  V +L+G+ +    +
Sbjct: 67  LYAI-AQVNLGITLRKQGRGDEAIVAY-----RNVNREDSAKLYVKVQFLLGLIFESQDK 120

Query: 147 DVPYDQRATKLMLQY--MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
                    +       +S  VE Y        A+ Y+ V    +  KE+ I  + + R
Sbjct: 121 LDE-----ARDAFNNIRLSDSVELY------TKAQVYLKVLN--IGKKEIRISLFNIHR 166


>gi|255521858|ref|ZP_05389095.1| hypothetical protein LmonocFSL_11642 [Listeria monocytogenes FSL
           J1-175]
          Length = 491

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 58/145 (40%), Gaps = 13/145 (8%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
           +  +             +  +E+ V   ++Q   +A  Y  + S   P   V    L   
Sbjct: 2   EKDKKTPAKIYPFYPNGQFYFERGVEAFRDQRIKEAIRYLVRASELEPGEAV---ILCQL 58

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           A      G++ ++  L  E + Q   + N++Y YY +  ++A M        +  +  LQ
Sbjct: 59  AICYTEIGQFHKSNQLLREVLEQ--RNGNMEYCYYFIANNFAYM--------KDYRRALQ 108

Query: 161 YMSRIVERYTNSPYVKGARFYVTVG 185
           Y +R ++  T+S Y + A+  + V 
Sbjct: 109 YANRYLDSSTDSEYTEEAKDLIEVL 133


>gi|194214883|ref|XP_001496400.2| PREDICTED: similar to aspartyl (asparaginyl) beta hydroxylase
           [Equus caballus]
          Length = 775

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 23/79 (29%), Gaps = 17/79 (21%)

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
             +   +  +     +V +Y  SP  +  +       + LA K         +R   V  
Sbjct: 369 RKRGKIEEAVNAFEELVRKYPQSPRARYGKA---QCEDDLAEK---------RRSNEV-- 414

Query: 210 IPRFQLVLANYSDAEHAEE 228
               +  +  Y +     +
Sbjct: 415 ---LRRAIETYQEVAALPD 430


>gi|161528527|ref|YP_001582353.1| TPR repeat-containing protein [Nitrosopumilus maritimus SCM1]
 gi|160339828|gb|ABX12915.1| Tetratricopeptide TPR_2 repeat protein [Nitrosopumilus maritimus
           SCM1]
          Length = 273

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 49/141 (34%), Gaps = 17/141 (12%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
                 ++  + V  +++     A  +FN+  +  P      ++LL          KYQ 
Sbjct: 6   KKEDPEDLMYEGVGMMEKNQPKAAISFFNKVLKQEPEN---TEALLQKGLALNLIKKYQD 62

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A +  ++ I   P+           G+S A+            +   +Y  R +E   +S
Sbjct: 63  AITCFDKLIEIDPKD---AQALNNRGISMAET--------GNIQGAAEYYDRAIEA--DS 109

Query: 173 PYVKGARFYVTVGRNQLAAKE 193
            Y   A F   V  ++L   E
Sbjct: 110 KYAS-AYFNKGVLLDKLQEHE 129



 Score = 35.1 bits (80), Expect = 9.5,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 65/197 (32%), Gaps = 43/197 (21%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           D +  + +  + +   +  N   A EY++   +    +  A   +  LL          +
Sbjct: 74  DPKDAQALNNRGISMAETGNIQGAAEYYDRAIEADSKYASAYFNKGVLLD------KLQE 127

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           +++A ++ E+ IT  P   N   + Y  G+   ++ R+        +  L   S + ++Y
Sbjct: 128 HEEALTVLEKAITIDPRKPNA--MIY-KGIVLGKLKRN--------EEALNCFSNVCKKY 176

Query: 170 TNSPYV----------KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
            N+                        ++L  K       Y      + A  R    L  
Sbjct: 177 PNNLDAFFQKGVQLAELDQHKKALDVFDELLKK-------YKDNVNVIYAKSRSMAALEK 229

Query: 220 YSDAEHAEEAMARLVEA 236
           Y       E++  L +A
Sbjct: 230 YP------ESLELLKQA 240


>gi|325474428|gb|EGC77615.1| hypothetical protein HMPREF9353_01194 [Treponema denticola F0402]
          Length = 429

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 28/63 (44%), Gaps = 12/63 (19%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CS 84
            SI V  L+G +++  +         +   +++Y +A+     +N+ KA E + +     
Sbjct: 349 ISIGVKLLLGQDKRDEK---------LSTVKKLYVQALKEYNNKNYEKAIELWKEILTID 399

Query: 85  RDF 87
           + +
Sbjct: 400 KRY 402


>gi|298244613|ref|ZP_06968419.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297552094|gb|EFH85959.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 853

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 63/187 (33%), Gaps = 45/187 (24%)

Query: 91  GVARKS--LL--MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
             A+++   L    A V + A +Y++A       +   P      Y +    +   ++  
Sbjct: 292 DWAQEASAQLWADQALVLHDAKRYEEAKETCSRALALNPRF-YEAYAH--RALIKYEL-- 346

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY------- 199
                 +     L+ ++ +VE   +   ++ A  Y  +  ++L   E  I          
Sbjct: 347 ------KDYAAALEDLNHVVEFAPD---LQVAYKYRALVYHKLEQFEQAIANQTHILERD 397

Query: 200 -------------YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA--YVALALMD 244
                        Y +  ++ AA+  FQ  +  +        A+A   +A  Y  L    
Sbjct: 398 DADAVMYNNRGYAYQRLEQFQAALADFQQAITLFPRF-----ALAYANQAGVYRELGEFQ 452

Query: 245 EAREVVS 251
           +A++ + 
Sbjct: 453 KAQDNIQ 459


>gi|224086187|ref|XP_002192972.1| PREDICTED: cell division cycle protein 27 isoform 1 [Taeniopygia
           guttata]
          Length = 833

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 51/196 (26%), Gaps = 50/196 (25%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 587 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 636

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP-------YVKGARFY 181
           N    +Y +GM Y +        Q    L   +  + ++    S         V+ A   
Sbjct: 637 N---AWYGLGMIYYK--------QEKFSLAEMHFQKALDINPQSSVLLCHIGVVQHALKK 685

Query: 182 VTVGRNQLAAKEVEI-----------GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
                + L  K + I                   +Y +A+   + +              
Sbjct: 686 SEKALDTL-NKAINIDPKNPLCKFHRASVLFANEKYKSALQELEELKQIVPKESLVY--- 741

Query: 231 ARLVEAYVALALMDEA 246
             + + Y  L     A
Sbjct: 742 FLIGKVYKKLGQTHLA 757


>gi|255599846|ref|XP_002537324.1| conserved hypothetical protein [Ricinus communis]
 gi|223516734|gb|EEF25059.1| conserved hypothetical protein [Ricinus communis]
          Length = 313

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 55/154 (35%), Gaps = 26/154 (16%)

Query: 94  RKSLLMSAFVQYSA--------GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
           ++S L      +             ++A +  E  + ++P+S +   +YY    +  ++ 
Sbjct: 153 QQSNLKIYNAYFEMANFYRDVLEDKKEAIATYETLLARFPQSSDKPSIYY----NLYRLY 208

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY----- 200
            D+            Y +R+++ Y  S +           R +LA  +     +Y     
Sbjct: 209 ADID-----ATKSNDYKNRLLKEYPESVFA-KVILDPDYAR-KLADVDAVFNGFYNEVYD 261

Query: 201 -LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
              + +Y   I +   +L  Y D  +A + +  L
Sbjct: 262 QYAQKQYAKVIEKANDLLNKYPDNRYAAQ-LYYL 294


>gi|51244491|ref|YP_064375.1| hypothetical protein DP0639 [Desulfotalea psychrophila LSv54]
 gi|50875528|emb|CAG35368.1| hypothetical membrane protein (BatB) [Desulfotalea psychrophila
           LSv54]
          Length = 566

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/104 (11%), Positives = 33/104 (31%), Gaps = 11/104 (10%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           +        +++ A + +    +    +    +         Y  G+   A    ++ + 
Sbjct: 366 EGEDAYNRADYAGAQKIYKSLLK---GSPDDPQLQYNMGTAAYKNGEIDTAILQFKKCLQ 422

Query: 123 QYPESKNVDY---VYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
                ++V+     YY +G SY Q  +    D    +  ++   
Sbjct: 423 T----EDVELQKRAYYNLGTSYYQKGKKSS-DTEPLEEAIKAYD 461


>gi|301025865|ref|ZP_07189353.1| tetratricopeptide repeat protein [Escherichia coli MS 69-1]
 gi|300395794|gb|EFJ79332.1| tetratricopeptide repeat protein [Escherichia coli MS 69-1]
          Length = 1157

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 78/236 (33%), Gaps = 36/236 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197
             Q +       +  +V R   S  V      +   G+   A             ++ + 
Sbjct: 557 RAQWS-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +  +R +Y AA   ++ VL          +A+  L E  +A      AR  ++ +
Sbjct: 611 DWAQQRRDYTAARAAYKNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 663



 Score = 35.9 bits (82), Expect = 6.1,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + ++ P      Y   L
Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537


>gi|256020877|ref|ZP_05434742.1| cellulose synthase subunit BcsC [Shigella sp. D9]
 gi|332282091|ref|ZP_08394504.1| cellulose synthase subunit [Shigella sp. D9]
 gi|332104443|gb|EGJ07789.1| cellulose synthase subunit [Shigella sp. D9]
          Length = 1157

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 77/236 (32%), Gaps = 36/236 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197
             Q         +  +V R   S  V      +   G+   A             ++ + 
Sbjct: 557 RAQWN-----SNIHELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 611 DWAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 663



 Score = 35.9 bits (82), Expect = 6.1,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + ++ P      Y   L
Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537


>gi|225850275|ref|YP_002730509.1| tetratricopeptide repeat domain protein [Persephonella marina
           EX-H1]
 gi|225644893|gb|ACO03079.1| tetratricopeptide repeat domain protein [Persephonella marina
           EX-H1]
          Length = 650

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 52/133 (39%), Gaps = 23/133 (17%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDF-PFAGVARKSLLMSAFVQY-------SAGKYQQAA 114
           K +L  ++ N+ KAYEY ++  +++ P+       L+ + +  Y          KY+ + 
Sbjct: 200 KGLLEFQKGNYEKAYEYLSKVYKEYEPY-------LIENPYYYYIFAENTYRIRKYEFSK 252

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
            L    I+   + + +      +G        D+   +        Y   IVE+Y +S  
Sbjct: 253 QLFRRIISLIKDEEIIRRSLLRLG--------DIFNIKGDKITAFNYYYSIVEKYPDSQE 304

Query: 175 VKGARFYVTVGRN 187
            K A+  +    +
Sbjct: 305 AKVAKLKILSMED 317


>gi|239815273|ref|YP_002944183.1| hypotheticalprotein [Variovorax paradoxus S110]
 gi|239801850|gb|ACS18917.1| TPR repeat-containing protein [Variovorax paradoxus S110]
          Length = 740

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 36/107 (33%), Gaps = 14/107 (13%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y + V  L++   ++A + F+        +     +L    +      ++Q+A +     
Sbjct: 148 YNRGVALLEKGRHAEALDDFDAVLAR---SSDDLDALCQRIYALCGLQRHQEALAESNHA 204

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           I ++P S +             +    V      +    Q   R+++
Sbjct: 205 IARHPSSADA-----------WRAHGHVLLGMGNSLQAAQAFERVID 240


>gi|254225343|ref|ZP_04918955.1| GGDEF family protein [Vibrio cholerae V51]
 gi|125622184|gb|EAZ50506.1| GGDEF family protein [Vibrio cholerae V51]
          Length = 667

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 72/212 (33%), Gaps = 32/212 (15%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQ-CSRDFPFAG--VARKSLLMS 100
           D+ L  + D      +Y    L +     +  A +Y N+            +  +     
Sbjct: 215 DLLLSLLPDYVDPSGIYNDVGLLMGTLGQYESALDYLNKALEYRLEQGNPLLIAQVEHSL 274

Query: 101 AFVQYSAGKYQQAASLGEEYITQY--PES--KNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
               +  G+Y+++    E+    +  P +    + YV+  +G +Y ++   V  DQ    
Sbjct: 275 GDTYFKQGRYEESILYFEQ-AKAHLTPANYLFGLAYVHLGLGKAYIELNNFVEGDQ-HLF 332

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             L+Y++          +       +      LA        +  K  +Y  AI      
Sbjct: 333 QALEYVN---------QHKDQHLQGLIYL--SLAQ-----AHF--KEQKYAQAIDYANQA 374

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           +A  S++           +AY+ LA + EA +
Sbjct: 375 VA-ISESASLPR---IKAQAYLQLAKIAEAEQ 402


>gi|94968763|ref|YP_590811.1| TPR repeat-containing serine/threonin protein kinase [Candidatus
           Koribacter versatilis Ellin345]
 gi|94550813|gb|ABF40737.1| serine/threonine protein kinase with TPR repeats [Candidatus
           Koribacter versatilis Ellin345]
          Length = 737

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 9/68 (13%), Positives = 26/68 (38%), Gaps = 3/68 (4%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y   ++      + +A     +     P     + +  M +      G++++A +  +E+
Sbjct: 582 YAYGLMLYYSHRWDEAAAQLRRALEVLPT---MQLAQGMRSVALARGGRHEEAKAQYQEF 638

Query: 121 ITQYPESK 128
           I  +P + 
Sbjct: 639 IRDHPTTP 646


>gi|90023206|ref|YP_529033.1| coenzyme A biosynthesis protein [Saccharophagus degradans 2-40]
 gi|89952806|gb|ABD82821.1| Tetratricopeptide region [Saccharophagus degradans 2-40]
          Length = 957

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 60/175 (34%), Gaps = 24/175 (13%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+ +V  ++ + + +A          +P   ++R      AF+   + ++ +AA++  + 
Sbjct: 651 YDASVYLMELKRWDEAENVLTTFKTRYPTNSLSRDIPAKLAFIYQESEQWDKAAAVLAKM 710

Query: 121 ITQYPESKNVD-----YVYYLVGMSY---------AQMIRDVPYD-QRATKLMLQYMSRI 165
                 S   D        YL    Y          +  RD  ++  +   L  +   ++
Sbjct: 711 -----ASDESDPELRRQSRYLSAELYEKSGRPAKAIEQYRDYAHNYPQPFGLATEARYKL 765

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
           V  Y        +       +  +A  + + G     R  Y+AA+   +    +Y
Sbjct: 766 VTLY---EQAGDSSKRRFWLKELIAENK-KAGDSKTARSNYLAAMAASEFAQDDY 816



 Score = 36.2 bits (83), Expect = 4.3,   Method: Composition-based stats.
 Identities = 32/236 (13%), Positives = 78/236 (33%), Gaps = 47/236 (19%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           +R +Y+ +  +  +    ++ +       D P +  A ++    A + +S G Y  +  L
Sbjct: 126 ERILYQLSKAYALDGKLDESNQVLGALVSDHPESDYAAEAEFRRAELAFSEGDYALSEKL 185

Query: 117 GEEYITQYPESKNVDY---VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV------- 166
             + +      K   +     Y+ G S  +          + +  ++  + ++       
Sbjct: 186 YAQVMA---RGKETPFYLNAVYMHGWSQFKR--------NSYRASIRSFTEVLDTVLVEG 234

Query: 167 ---ERYTNSP----------------YVKGARFYVTVGRNQLAAKE------VEIGRYYL 201
              E  +NS                 Y+ GA   +T   N L  +       +++G  YL
Sbjct: 235 QSSEEMSNSQKNMAADTLRIVAIVFSYIDGAET-ITEVYNNLGQRHYQYMLYMQLGDLYL 293

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           ++  Y  +   ++  + ++     A +   + +E Y       E         + Y
Sbjct: 294 EKRRYRDSADTYRHYVKHFPTTNQAPDFSVKAIEVYNLGNFPSEILPAKEEYVQNY 349



 Score = 35.9 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 17/52 (32%)

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
           Y+ A   +   +  +   E   E    + EAY       EA +    +   Y
Sbjct: 421 YLKAADFYNQFVRTFPQDEKTPEMAFLMGEAYFEAGYYPEAADAYEAVAYDY 472


>gi|67925473|ref|ZP_00518813.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
 gi|67852680|gb|EAM48099.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
          Length = 240

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 26/82 (31%), Gaps = 10/82 (12%)

Query: 65  VLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
                + N+ KA    ++     P +      + L+           Y QA +   + I 
Sbjct: 50  KQEANQGNYQKAIAILDKLIARLPNSAIDYNNRGLM-----YLKIADYDQAMTDFNKAIA 104

Query: 123 QYPESKNVDYVYYLVGMSYAQM 144
               S ++D  Y   G  YA  
Sbjct: 105 L---SPSLDRAYNNRGNCYAHQ 123


>gi|330507167|ref|YP_004383595.1| TPR-repeat-containing protein [Methanosaeta concilii GP-6]
 gi|328927975|gb|AEB67777.1| TPR-repeat protein [Methanosaeta concilii GP-6]
          Length = 161

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 35/106 (33%), Gaps = 14/106 (13%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           K +  ++  +F KA EYF   +   P    A           Y  G+  +A    +  I 
Sbjct: 11  KGMDCVRRMDFEKAIEYFQIVTASNPDMPEAWN---NLGVAFYGLGRIDEALESYDRSIA 67

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
             P + +             +    +  +Q+     L+    ++E+
Sbjct: 68  LDPSNLDA-----------LRNRAFLLRNQKRLPEALEAYDTVLEK 102


>gi|309782751|ref|ZP_07677472.1| tetratricopeptide repeat protein [Ralstonia sp. 5_7_47FAA]
 gi|308918529|gb|EFP64205.1| tetratricopeptide repeat protein [Ralstonia sp. 5_7_47FAA]
          Length = 209

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 32/97 (32%), Gaps = 13/97 (13%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            I  S       G    +         TD  + + +  +A    K     KA + + Q +
Sbjct: 13  FIVLSAVAALFAGCSTTN-----PGPQTDEAFGQSM-SEAEAAAKGGQQDKAIDLYQQIA 66

Query: 85  RDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +  P       R + +     Q+ A KY QA    EE
Sbjct: 67  KQNPTRDEPWVRIAQI-----QFGAEKYPQAILAAEE 98


>gi|302816471|ref|XP_002989914.1| hypothetical protein SELMODRAFT_447866 [Selaginella moellendorffii]
 gi|300142225|gb|EFJ08927.1| hypothetical protein SELMODRAFT_447866 [Selaginella moellendorffii]
          Length = 899

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 23/62 (37%), Gaps = 3/62 (4%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
             +Y    L      F +A E +++     P +    ++ L  A     AG  ++A    
Sbjct: 432 DALYNLGGLLRDTGRFQRAAEVYSRVLSLNP-SHW--QAQLNRAVSLLGAGDTEEARKAL 488

Query: 118 EE 119
           +E
Sbjct: 489 KE 490


>gi|282896150|ref|ZP_06304175.1| hypothetical protein CRD_01036 [Raphidiopsis brookii D9]
 gi|281198950|gb|EFA73826.1| hypothetical protein CRD_01036 [Raphidiopsis brookii D9]
          Length = 706

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 67/208 (32%), Gaps = 44/208 (21%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKY 110
           D  Y    Y + +L  +  +   A   +NQ  +  P        + L+ S       G  
Sbjct: 514 DHNYTDAYYNRGILRSELGDKQGAIVDYNQAIKLNPNYTNAYINRGLVRS-----ELGDN 568

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           Q A +   + I   P   N    YY  G  ++++           +  +   ++ +    
Sbjct: 569 QVAIADYNQAIKLNP---NYALAYYNRGTVHSEL--------GDKRGAIADYNQAIRLDP 617

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRY-------------YLKRG------EY-VAAI 210
           N      A +   + R++L  K+  I  Y             Y  RG       Y   AI
Sbjct: 618 N---YTDAYYNRGILRSELGDKQGAIDDYNQAIKLDPNYANAYYNRGIIRSELGYNQGAI 674

Query: 211 PRFQLVLANYSDA---EHAEEAMARLVE 235
             FQ  +  Y       +  +A+ R+ E
Sbjct: 675 ADFQKAVNIYQQQGKENNYRDALDRIRE 702



 Score = 35.5 bits (81), Expect = 9.3,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 56/166 (33%), Gaps = 25/166 (15%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKY 110
           D  Y    Y + ++  +  +   A   +NQ  +  P        + L+ S       G  
Sbjct: 412 DSNYTDAYYNRGIVRSELGDKQGAIVDYNQAIKLNPNYTNAYINRGLVRS-----ELGDN 466

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           Q A +   + I   P   N    YY  G+ ++++           +  +   ++ +    
Sbjct: 467 QVAIADYNQAIKLNP---NYALAYYNRGIVHSEL--------GDKRGAIADYNQAIRL-- 513

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG---EYVAA-IPR 212
           +  Y   A +   + R++L  K+  I  Y         Y  A I R
Sbjct: 514 DHNYT-DAYYNRGILRSELGDKQGAIVDYNQAIKLNPNYTNAYINR 558


>gi|218550715|ref|YP_002384506.1| hypothetical protein EFER_3426 [Escherichia fergusonii ATCC 35469]
 gi|218358256|emb|CAQ90903.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469]
          Length = 248

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 18/155 (11%), Positives = 48/155 (30%), Gaps = 23/155 (14%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS--LLMSAFVQYS 106
           + +      +  Y  A    +   + +A  ++ Q          A ++  +L  A  Q++
Sbjct: 78  EELAIAETNQNHYALANELARLGRYHEAVPHYQQALS----GIFAHEAVMMLSLAQAQFA 133

Query: 107 AGKYQQAASLGEEYITQYPESKNVD-YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
             ++       E+ +   P+ ++ D ++ +   ++           Q            +
Sbjct: 134 IQEFAACQQTLEDVMRYNPDFQSADGHLLFARALA----------AQEKYADAESEFEVL 183

Query: 166 VERYTNSP---YVKGARFYVTVGRNQLAAKEVEIG 197
           V  Y +     Y       ++  R    A E  + 
Sbjct: 184 VSYYPSPQARIYYAELLAKMSRLRE---ANEQYVA 215


>gi|207109494|ref|ZP_03243656.1| competence lipoprotein [Helicobacter pylori HPKX_438_CA4C1]
          Length = 137

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 39/107 (36%), Gaps = 6/107 (5%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           + +K  L I  +I V       ++  +D Y             Y+  +  +   N   A 
Sbjct: 32  KHFKTFLLITMAIIVIGTGCANKKKKKDEYNKPAIFW------YQGILREILFANLETAD 85

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
            Y++    +   + +  +++L          +Y  A+   +EYI ++
Sbjct: 86  NYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRF 132


>gi|218961446|ref|YP_001741221.1| hypothetical protein; putative signal peptide [Candidatus Cloacamonas
            acidaminovorans]
 gi|167730103|emb|CAO81015.1| hypothetical protein; putative signal peptide [Candidatus Cloacamonas
            acidaminovorans]
          Length = 1530

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 52/186 (27%), Gaps = 34/186 (18%)

Query: 64   AVLFLKEQNFSKAY-EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
              L +  + +  A         R         + LL      +++G Y  A     + I 
Sbjct: 854  GELQMLNKEYETAINSLLRTLQRFNNQGADVIQKLL--GDCYFASGNYASAIDKYIDAIQ 911

Query: 123  QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT-----NSPYVK- 176
              P   N    YY +G +YA+         R  +      +   ++          Y + 
Sbjct: 912  LNP---NEAEFYYCLGNAYAKS--------RKAREATNNFAIAYQKMPAEVKYGFAYAQA 960

Query: 177  --------GARFYVTVGRNQLAAKEVEIG--RYY----LKRGEYVAAIPRFQLVLANYSD 222
                     A   +      +A+         +Y    +K   Y  A    Q+ L    D
Sbjct: 961  LDKEFRSTEALTVMDNIYQYIASDSTTTAYHEFYHDLLIKEQRYDDAWKEIQIALKYAPD 1020

Query: 223  AEHAEE 228
             +  +E
Sbjct: 1021 NKLLQE 1026


>gi|124003540|ref|ZP_01688389.1| tetratricopeptide repeat domain protein [Microscilla marina ATCC
           23134]
 gi|123991109|gb|EAY30561.1| tetratricopeptide repeat domain protein [Microscilla marina ATCC
           23134]
          Length = 629

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 20/143 (13%), Positives = 53/143 (37%), Gaps = 7/143 (4%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           RD     +       + Y    L + +    +A +   +  + +    +  + L   + +
Sbjct: 486 RDNTALDMDTTNSAMKAYAGVELLMFQHKDKEALDKLVEMEKKYKDHSLKDEILWSKSKL 545

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
                K+Q+   + E+ + Q+ +    D  ++ +G  Y + +++        +   +Y  
Sbjct: 546 LLKMAKFQETIEVLEQIVKQHGQDILADDAHFTIGKIYEEYLKNP-------EKAKEYYR 598

Query: 164 RIVERYTNSPYVKGARFYVTVGR 186
             + ++  S YV  AR    + R
Sbjct: 599 NHLTKFPGSIYVVEARKRFRIIR 621


>gi|121588006|ref|ZP_01677758.1| GGDEF family protein [Vibrio cholerae 2740-80]
 gi|121547747|gb|EAX57838.1| GGDEF family protein [Vibrio cholerae 2740-80]
          Length = 667

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 72/212 (33%), Gaps = 32/212 (15%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQ-CSRDFPFAG--VARKSLLMS 100
           D+ L  + D      +Y    L +     +  A +Y N+            +  +     
Sbjct: 215 DLLLSLLPDYVDPSGIYNDVGLLMGTLGQYESALDYLNKALEYRLEQGNPLLIAQVEHSL 274

Query: 101 AFVQYSAGKYQQAASLGEEYITQY--PES--KNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
               +  G+Y+++    E+    +  P +    + YV+  +G +Y ++   V  DQ    
Sbjct: 275 GDTYFKQGRYEESILYFEQ-AKAHLTPANYLFGLAYVHLGLGKAYIELNNFVEGDQ-HLF 332

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             L+Y++          +       +      LA        +  K  +Y  AI      
Sbjct: 333 QALEYVN---------QHKDQHLQGLIYL--SLAQ-----AHF--KEQKYAQAIDYANQA 374

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           +A  S++           +AY+ LA + EA +
Sbjct: 375 VA-ISESASLPR---IKAQAYLQLAKIAEAEQ 402


>gi|39942232|ref|XP_360653.1| hypothetical protein MGG_03196 [Magnaporthe oryzae 70-15]
 gi|145015819|gb|EDK00309.1| hypothetical protein MGG_03196 [Magnaporthe oryzae 70-15]
          Length = 923

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 44/142 (30%), Gaps = 28/142 (19%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSA 107
             D    +  Y     ++ +Q + KAYE + Q        P              + Y  
Sbjct: 289 AADNSDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQI 342

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY---AQMIRDVPYDQRATKLMLQYMSR 164
            +Y+ A       I   P    +  V+Y +G  Y      I D           L    R
Sbjct: 343 NQYRDALDAYSRAIRLNP---YLSEVWYDLGTLYESCNNQIND----------ALDAYQR 389

Query: 165 IVERYTNSPYVKGARFYVTVGR 186
             E   ++P++   +  + + R
Sbjct: 390 AAELDPSNPHI---KARLNLLR 408


>gi|87307662|ref|ZP_01089806.1| hypothetical protein DSM3645_29112 [Blastopirellula marina DSM
           3645]
 gi|87289832|gb|EAQ81722.1| hypothetical protein DSM3645_29112 [Blastopirellula marina DSM
           3645]
          Length = 234

 Score = 37.4 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 29/91 (31%), Gaps = 24/91 (26%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQC--SRDFP--FAG----VARKSLLMSAFVQYSAGKYQQ 112
           Y  A    +   + KA E F +   S D P  +       +    + +A        Y  
Sbjct: 27  YRAAETAYQNGEYQKAIELFTEVAKSSDNPAIYGNRANCYSSLGDIDAA-----LKDYAT 81

Query: 113 AA-----SLGEEYITQYPESKNVDYVYYLVG 138
           A      + G+      P   N+ Y YY  G
Sbjct: 82  AIEKATEATGD------PNDPNLAYFYYNRG 106


>gi|328872554|gb|EGG20921.1| tetratricopeptide-like helical domain-containing protein
           [Dictyostelium fasciculatum]
          Length = 554

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 26/86 (30%), Gaps = 7/86 (8%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMS 100
            R+       +     E   +     K+  + +A + F +  +  P      + +S    
Sbjct: 354 KRERDEREYINPEKSAEAKNQGNEHFKKGEYPEAIKCFEEAIKRNPSDHTIYSNRSA--- 410

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPE 126
                  G+Y  A    E+ I   P 
Sbjct: 411 --CYSKLGEYPLAVKDAEKVIELAPT 434


>gi|300870179|ref|YP_003785050.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000]
 gi|300687878|gb|ADK30549.1| TPR domain protein [Brachyspira pilosicoli 95/1000]
          Length = 631

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 31/247 (12%), Positives = 72/247 (29%), Gaps = 49/247 (19%)

Query: 61  YEKAVLFLKEQNFSKAY--------------EYFNQCSRDFPFAGVAR-KSLLMSAFVQY 105
           Y+ A+     +N+  +               EY                ++L+  A+  +
Sbjct: 22  YDDALNLYNNRNYEASISVLNSLNIKPSNINEYLLLIDNYIKLQNYTMAQTLIDDAYRYH 81

Query: 106 ---------------SAGKYQQAASLGEEYITQYPESKNVDYV---------YYLVGMSY 141
                             K  +A +   +      ++   +Y          YY   MS 
Sbjct: 82  SKDYRVLERKLTIELLNNKNNEARTTINQIKALDSKNYLANYAEGVLSERVGYYKTAMSL 141

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            +    +   +    + L Y+  +     N+               ++A     +  YY 
Sbjct: 142 YERAMIINRTRSEATVALAYLK-LANGDRNA--ALDLFNLNVKNNPRMAESYYNLANYYY 198

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             G Y A++   +  L  Y    +  +A       Y+AL   D   + +++++   P+  
Sbjct: 199 ITGNYNASLNEIKNALYYY---TNYNDAKILQANVYMAL---DRYNDAIAILEY-LPESS 251

Query: 262 WARYVET 268
           +    + 
Sbjct: 252 FRDDTKN 258


>gi|331268802|ref|YP_004395294.1| TPR domain-containing protein [Clostridium botulinum BKT015925]
 gi|329125352|gb|AEB75297.1| TPR domain protein [Clostridium botulinum BKT015925]
          Length = 461

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 7/77 (9%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           +K    L ++ + +A  Y+ +     P    A+        V +   +Y++A     E I
Sbjct: 76  KKGNNALDKKQYRRAILYYKKILLIEPKLTFAKN---KLGLVFFYDKQYEEAIIQFRELI 132

Query: 122 TQYPESK----NVDYVY 134
              P +     N+ YVY
Sbjct: 133 QLNPHNSIFYNNLAYVY 149


>gi|326668250|ref|XP_002662229.2| PREDICTED: tetratricopeptide repeat protein 16-like [Danio rerio]
          Length = 596

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 18/122 (14%), Positives = 38/122 (31%), Gaps = 15/122 (12%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
                + YE  ++ +    F KA   F++     P      +  +  A        +Q A
Sbjct: 26  KEKAEKHYETGIISMAHSQFDKAVSCFSKAIVLQP---HKTQFYVQRAEAYLQLCDFQSA 82

Query: 114 ASLGEEYITQYPE----SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           A   +      P+     + + +++YL G            D       L+  ++  E  
Sbjct: 83  ALDYKHARRLEPQTEAYHQRLAFIHYLQGQCLF--------DLGNFLEALESFTKAAELK 134

Query: 170 TN 171
            +
Sbjct: 135 PD 136


>gi|325183067|emb|CCA17523.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 691

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 20/158 (12%), Positives = 53/158 (33%), Gaps = 25/158 (15%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           ++++KA + F              ++     +          A +  +  +   P S+  
Sbjct: 70  EDYTKAADCFRGLVSL---NEQNAEAWGHLGYCCLMMNDLTSAHTAYQYAMYNNPNSQKD 126

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
             ++Y +G  Y ++         + +   +    ++    N       +F + +      
Sbjct: 127 PTLWYGIGQLYERL--------GSLEHAQESFEAVLRFEPNFNMALEVKFRLGI------ 172

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
                I +   +RG+Y  A+ R + VL +  ++    E
Sbjct: 173 -----IAK---QRGDYENALERLKSVLHDVQNSVSTSE 202


>gi|157129462|ref|XP_001655398.1| tpr repeat nuclear phosphoprotein [Aedes aegypti]
 gi|108872219|gb|EAT36444.1| tpr repeat nuclear phosphoprotein [Aedes aegypti]
          Length = 1120

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 40/110 (36%), Gaps = 18/110 (16%)

Query: 158 MLQYMSRIVERYTNSPYVKGA-------RFYVTVGRNQLAA-KE---------VEIGRYY 200
            L    +++     + +           +  +   R+  A  +E         + I   Y
Sbjct: 631 ALAIYKQVLRNDPKNIWAANGIGAVLAHKGCIIEARDIFAQVREATADFCDVWLNIAHIY 690

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
           +++ +Y++AI  ++  L  +    +  + M  L  AY     + EA+  +
Sbjct: 691 VEQKQYISAIQMYENCLKKFYKHNNV-DVMQYLARAYFRAGKLKEAKMTL 739


>gi|332708571|ref|ZP_08428545.1| hypothetical protein LYNGBM3L_27110 [Lyngbya majuscula 3L]
 gi|332352668|gb|EGJ32234.1| hypothetical protein LYNGBM3L_27110 [Lyngbya majuscula 3L]
          Length = 917

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 19/59 (32%), Gaps = 7/59 (11%)

Query: 62  EKAVLFLKEQNFSKAYEYFN-----QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
                +   +++ KA +Y+           +P       SL       Y  G Y++A  
Sbjct: 286 NLGNAYYHLKDYKKAIDYYQQYLAIARENQYPRGK--ANSLASLGNAYYHLGDYEKAID 342


>gi|330800106|ref|XP_003288080.1| hypothetical protein DICPUDRAFT_152270 [Dictyostelium purpureum]
 gi|325081904|gb|EGC35404.1| hypothetical protein DICPUDRAFT_152270 [Dictyostelium purpureum]
          Length = 2127

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 42/127 (33%), Gaps = 31/127 (24%)

Query: 53   DVRYQREVYEKAVLF-----------LKEQNFSKAYEYFNQCSRDFPF------------ 89
                  + Y+KA+             L   NF  A E   +   +F F            
Sbjct: 1737 HDETPLQFYDKALNLETRTKNLASIHLNIGNFYLANEKITEAKNEF-FKSLHHSEQESEK 1795

Query: 90   -AGVARKSLLMSAFVQYSAGKYQQAA----SLGEEYITQY--PESKNVDYVYYLVGMSYA 142
               +  KS+   A V+Y    Y +A     +    +   +     K++   Y+++G+ Y 
Sbjct: 1796 NTPIYAKSIFKMALVEYKEKNYIEAIKKFETSINLFKELFKSSNHKDIGTCYHMIGLCYF 1855

Query: 143  QMIRDVP 149
            Q+   + 
Sbjct: 1856 QLDDGID 1862


>gi|302343463|ref|YP_003807992.1| serine/threonine protein kinase [Desulfarculus baarsii DSM 2075]
 gi|301640076|gb|ADK85398.1| serine/threonine protein kinase [Desulfarculus baarsii DSM 2075]
          Length = 842

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 16/32 (50%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
            +E+  + V F  E  + +A E F + +  +P
Sbjct: 655 PQELLVEGVRFFNEGKYQRAVENFEKVAAVYP 686


>gi|116327132|ref|YP_796852.1| TPR repeat-containing protein [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116332211|ref|YP_801929.1| TPR repeat-containing protein [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116119876|gb|ABJ77919.1| Conserved hypothetical protein with tetratricopeptide repeat domain
           [Leptospira borgpetersenii serovar Hardjo-bovis L550]
 gi|116125900|gb|ABJ77171.1| Conserved hypothetical protein with tetratricopeptide repeat domain
           [Leptospira borgpetersenii serovar Hardjo-bovis JB197]
          Length = 378

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 26/70 (37%), Gaps = 8/70 (11%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS------LLMSA--FVQYSAG 108
           Q  ++ K  ++ K   + KA   F + S  +P + V RK+       L      + Y   
Sbjct: 304 QTALFRKGTIYFKSGKYEKAAALFQEASDRYPDSPVGRKASAWKKESLDQIEDNLHYKES 363

Query: 109 KYQQAASLGE 118
              ++    E
Sbjct: 364 DKAKSKEDLE 373



 Score = 36.6 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 41/130 (31%), Gaps = 13/130 (10%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-KSLLMSAFVQYSAGKYQQAASLGEEY 120
           EKA      + +  A + F +       +  A  ++L   A    + GK   A       
Sbjct: 236 EKARQLYVRKQYYGAIDTFKKALEMG-ISPKAEEQALFYIAESYEAVGKSDSALQYLNRV 294

Query: 121 ITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           +    +  ++D    +  G  Y +            +          +RY +SP  + A 
Sbjct: 295 LGN--QDGSLDQTALFRKGTIYFKS--------GKYEKAAALFQEASDRYPDSPVGRKAS 344

Query: 180 FYVTVGRNQL 189
            +     +Q+
Sbjct: 345 AWKKESLDQI 354


>gi|59809017|gb|AAH89446.1| P4HA3 protein [Homo sapiens]
          Length = 528

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 28/80 (35%), Gaps = 9/80 (11%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDF--PFAGVA-------RKSLLMSAFVQYSAGKYQ 111
           ++   +     ++  A  +  +    F   +             +L   AF  + AG   
Sbjct: 169 FQVGKVAYDMGDYYHAIPWLEEAVSLFRGSYGEWKTEYEASLEDALDHLAFAYFRAGNVS 228

Query: 112 QAASLGEEYITQYPESKNVD 131
            A SL  E++   P++K + 
Sbjct: 229 CALSLSREFLLYSPDNKRMA 248


>gi|57530548|ref|NP_001006331.1| cell division cycle protein 27 homolog [Gallus gallus]
 gi|53131851|emb|CAG31852.1| hypothetical protein RCJMB04_12e16 [Gallus gallus]
          Length = 833

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 51/196 (26%), Gaps = 50/196 (25%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 587 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 636

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP-------YVKGARFY 181
           N    +Y +GM Y +        Q    L   +  + ++    S         V+ A   
Sbjct: 637 N---AWYGLGMIYYK--------QEKFSLAEMHFQKALDINPQSSVLLCHIGVVQHALKK 685

Query: 182 VTVGRNQLAAKEVEI-----------GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
                + L  K + I                   +Y +A+   + +              
Sbjct: 686 SEKALDTL-NKAINIDPKNPLCKFHRASVLFANEKYKSALQELEELKQIVPKESLVY--- 741

Query: 231 ARLVEAYVALALMDEA 246
             + + Y  L     A
Sbjct: 742 FLIGKVYKKLGQTHLA 757


>gi|331003852|ref|ZP_08327344.1| hypothetical protein HMPREF0491_02206 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330412044|gb|EGG91441.1| hypothetical protein HMPREF0491_02206 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 279

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 32/99 (32%), Gaps = 20/99 (20%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L I    A+  L G      ++               +E     L E  +++A E F++ 
Sbjct: 10  LFITAIFAILLLSGCSANEKKN---------------FENGKALLDEGKYTEAVEAFDKA 54

Query: 84  SRDFPFAGVARKSLLMS----AFVQYSAGKYQQAASLGE 118
                 +   R   +      A  +Y AG Y+ A    +
Sbjct: 55  ISAH-GSKNIRGLEIDILRYRAEAEYKAGDYKAAEHTYK 92


>gi|312888884|ref|ZP_07748446.1| Tetratricopeptide TPR_2 repeat protein [Mucilaginibacter paludis
           DSM 18603]
 gi|311298625|gb|EFQ75732.1| Tetratricopeptide TPR_2 repeat protein [Mucilaginibacter paludis
           DSM 18603]
          Length = 345

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 42/123 (34%), Gaps = 12/123 (9%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
             +     ++ ++ V    +  ++ A   FN+  +  P  G A       AF  Y+  K 
Sbjct: 23  AQNNNTANDLIKQGVDLHNQGKYADAIAQFNEVLKTEPQNGYAN---YEMAFSLYALKKT 79

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           + A    E+ +     S NV   Y L+   Y +  +         +  +      ++   
Sbjct: 80  KDAIPHLEKAVQSNNASLNVA-AYCLLANIYDEDNQH--------QKAIDTYKTGIKINP 130

Query: 171 NSP 173
           + P
Sbjct: 131 DYP 133


>gi|303250431|ref|ZP_07336629.1| hypothetical protein APP6_1846 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307252216|ref|ZP_07534113.1| UDP-N-acetylglucosamine-peptide-n- acetylglucosaminyltransferase
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|302650757|gb|EFL80915.1| hypothetical protein APP6_1846 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306860138|gb|EFM92154.1| UDP-N-acetylglucosamine-peptide-n- acetylglucosaminyltransferase
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
          Length = 457

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 55/156 (35%), Gaps = 30/156 (19%)

Query: 59  EVYEKAVLFL-----KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
           EVY +A + L     ++  F +A   FN  SR+      A  + +         G+  +A
Sbjct: 181 EVYVRAQINLGITLGEQGKFDEAIAAFNNVSREDSTELYAI-AQVNLGITLRKQGRGDEA 239

Query: 114 ASLGEEYITQYPESKNVD--Y--VYYLVGMSYAQMIRDVPYDQRATKLMLQY--MSRIVE 167
                    +    ++    Y  V +L+G+ +    +         +       +S  VE
Sbjct: 240 IVAY-----RNVNREDSAKLYVKVQFLLGLIFESQDK-----LDEARDAFNNIRLSDSVE 289

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
            Y        A+ Y+ V    +  KE+ I  + + R
Sbjct: 290 LY------TKAQVYLKVLN--IGKKEIRISLFNIHR 317


>gi|300857193|ref|YP_003782177.1| TPR-repeat-containing protein [Clostridium ljungdahlii DSM 13528]
 gi|300437308|gb|ADK17075.1| TPR-repeat-containing protein [Clostridium ljungdahlii DSM 13528]
          Length = 410

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 44/121 (36%), Gaps = 23/121 (19%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG----VARKSLLMSAFVQYSAGKYQQAASL 116
           Y+    +L  ++++ A  Y  +    + F       A   + M A    S+G  + A + 
Sbjct: 295 YKLGTNYLNSKDYNNAKAYLTKA---YEFGSENYLYA-DIIYMLATTLDSSGDTKNAINY 350

Query: 117 GEEYITQYPESKNVDY---VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
             +Y        + DY   V Y + + Y    +             +Y   +V++Y NS 
Sbjct: 351 YIQYDK---GFSDGDYEETVLYRLAVIYKDTDKS---------QAKKYAQSLVDKYPNSI 398

Query: 174 Y 174
           Y
Sbjct: 399 Y 399



 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 40/109 (36%), Gaps = 7/109 (6%)

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL------KRGEYVAAIPRF 213
            Y  ++   Y NS     A+ Y+T      +   +     Y+        G+   AI  +
Sbjct: 292 AYFYKLGTNYLNSKDYNNAKAYLTKAYEFGSENYLYADIIYMLATTLDSSGDTKNAINYY 351

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
                 +SD ++ E  + RL   Y       +A++    + ++YP   +
Sbjct: 352 IQYDKGFSDGDYEETVLYRLAVIYKDTD-KSQAKKYAQSLVDKYPNSIY 399


>gi|289192976|ref|YP_003458917.1| Tetratricopeptide TPR_2 repeat protein [Methanocaldococcus sp.
           FS406-22]
 gi|288939426|gb|ADC70181.1| Tetratricopeptide TPR_2 repeat protein [Methanocaldococcus sp.
           FS406-22]
          Length = 284

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 37/88 (42%), Gaps = 5/88 (5%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQRE--VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
            L+   + S   + L   +++R      ++   ++ L+ + F +A + F++     PF  
Sbjct: 192 ILISLNKLSEAIITLKRASEIRPDDVGVLFNLGLVHLRLKEFKEAIDAFDKVLERNPFHL 251

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEE 119
            AR   L  A      G+  +A  + +E
Sbjct: 252 GAR---LGKAIAYEKLGELDKALKIYDE 276


>gi|260463813|ref|ZP_05812010.1| Tetratricopeptide TPR_2 repeat protein [Mesorhizobium opportunistum
            WSM2075]
 gi|259030410|gb|EEW31689.1| Tetratricopeptide TPR_2 repeat protein [Mesorhizobium opportunistum
            WSM2075]
          Length = 1372

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 31/108 (28%), Gaps = 28/108 (25%)

Query: 53   DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG-VAR----------------- 94
            D +     Y + +     +++S A   F+Q  R +P     A                  
Sbjct: 929  DAKDAPSYYGRGIERADSKDYSGAIADFDQAIRLYPGNPDYAVARKAAVAALKKGGAAPL 988

Query: 95   ---------KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
                     ++ +      Y   KY +A +     I   P  K   YV
Sbjct: 989  AVGSDPRNLQAFMDRGNAFYGKRKYDRAIAEYSRAIALDPR-KASAYV 1035



 Score = 35.9 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 49/171 (28%), Gaps = 23/171 (13%)

Query: 30   IAVCFLVGWERQSSRDV--YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
            IA+       +   + V       +      + + K     ++ ++  A   + +    F
Sbjct: 1141 IAMAAKANASKMPGKAVGEAPAKPSSASPAAQAFSKGWTLHEKNDYDGAIALYGKAIAFF 1200

Query: 88   P-FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
            P F      + L  A    +   Y  A +   + I   P           +  +Y    +
Sbjct: 1201 PAFHD----AYLARAMAWEAKRDYAHAVADYSQAIALNPN----------LAETYYDRGQ 1246

Query: 147  DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
            ++ + Q      L    + +     S   + A+ Y   G   +   E    
Sbjct: 1247 NLGF-QGDYDGALADYDKAI-----SLNTRDAKVYADRGLIWMGRHEDAAA 1291


>gi|302915463|ref|XP_003051542.1| hypothetical protein NECHADRAFT_99925 [Nectria haematococca mpVI
           77-13-4]
 gi|256732481|gb|EEU45829.1| hypothetical protein NECHADRAFT_99925 [Nectria haematococca mpVI
           77-13-4]
          Length = 880

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 21/145 (14%), Positives = 47/145 (32%), Gaps = 36/145 (24%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL----------MSA 101
            D +  +  Y     ++ +Q + KAYE +             ++++              
Sbjct: 293 ADNQDAQSWYLLGRCYMSQQKYPKAYEAY-------------QQAVYRDGKNPTFWCSIG 339

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
            + Y   +Y+ A       I   P    +  V+Y +G +  +   +   D       L  
Sbjct: 340 VLYYQINQYRDALDAYSRAIRLNP---YISEVWYDLG-TLYESCNNQITD------ALDA 389

Query: 162 MSRIVERYTNSPYVKGARFYVTVGR 186
             R  E    +P++   +  + + R
Sbjct: 390 YQRAAELDPGNPHI---KARLQLLR 411


>gi|221503955|gb|EEE29632.1| tetratricopeptide repeat protein, tpr, putative [Toxoplasma gondii
           VEG]
          Length = 608

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 53/180 (29%), Gaps = 44/180 (24%)

Query: 49  DSVTDVRYQREVY--EKAVLFLKEQNFSKA-YEYFNQCSRDFP----FAGVARKSLLMSA 101
           D   +      +Y   KA ++++  ++ K   E      + +     F+ VA K     A
Sbjct: 268 DEAIEKNPNEILYLNNKAAVYMELGDYDKCLAECQKALDKRYECKADFSKVA-KVYCRMA 326

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
             +  +G Y  A                     Y   +             R T+  L  
Sbjct: 327 ACKTRSGDYSGAI------------------AMYEKALCEDNN--------RMTRNALNE 360

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
           + +          +K  +         LA +  E G  Y K+G+Y AA   +   +    
Sbjct: 361 VKK----------LKEKKEKEDYINPALAEQHREKGNEYFKQGDYPAAKKEYDEAIRRNP 410


>gi|115963479|ref|XP_001196739.1| PREDICTED: similar to MGC80272 protein, partial [Strongylocentrotus
            purpuratus]
          Length = 1749

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 55/193 (28%), Gaps = 47/193 (24%)

Query: 67   FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
             +KE  +  A    +Q  ++ P +  A  SLL   +  +    Y  AA   E+    +P 
Sbjct: 1121 QIKEGKYIDAIHILSQELQNHPRSR-AALSLL--GYCYFHVQDYANAAECYEQLSQFFP- 1176

Query: 127  SKNVD-------YVYY--------LVG---MSYAQMIRDVPYDQRATKLMLQYM---SRI 165
               VD          Y        +     +   +    +   Q A K   + +     +
Sbjct: 1177 --EVDTYRLYYAQALYHACAYPEAMKATFQVENQEYQPKITKLQAAIKYGEEDLPGAKSL 1234

Query: 166  VERYTN----------------SPYVKGARFYVTVGRNQL---AAKEVEIGRYYLKRGEY 206
            VE+  N                  Y + A    T     +   A     I   Y    +Y
Sbjct: 1235 VEQCPNDDPDTEVNLGCLLFKEGRY-EQACQKFTTAMQIMGYRADLAYNIALCYYSMKQY 1293

Query: 207  VAAIPRFQLVLAN 219
              A+     ++  
Sbjct: 1294 APALRNIAEIIER 1306


>gi|6456747|gb|AAF09252.1|AF200703_1 putative hemolysin [Leptospira borgpetersenii]
          Length = 378

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 26/70 (37%), Gaps = 8/70 (11%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS------LLMSA--FVQYSAG 108
           Q  ++ K  ++ K   + KA   F + S  +P + V RK+       L      + Y   
Sbjct: 304 QTALFRKGTIYFKSGKYEKAAALFQEASDRYPDSPVGRKASAWKKESLDQIEDNLHYKES 363

Query: 109 KYQQAASLGE 118
              ++    E
Sbjct: 364 DKAKSKEDLE 373



 Score = 36.6 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 41/130 (31%), Gaps = 13/130 (10%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-KSLLMSAFVQYSAGKYQQAASLGEEY 120
           EKA      + +  A + F +       +  A  ++L   A    + GK   A       
Sbjct: 236 EKARQLYVRKQYYGAIDTFKKALEMG-ISPKAEEQALFYIAESYEAVGKSDSALQYLNRV 294

Query: 121 ITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           +    +  ++D    +  G  Y +            +          +RY +SP  + A 
Sbjct: 295 LGN--QDGSLDQTALFRKGTIYFKS--------GKYEKAAALFQEASDRYPDSPVGRKAS 344

Query: 180 FYVTVGRNQL 189
            +     +Q+
Sbjct: 345 AWKKESLDQI 354


>gi|163846558|ref|YP_001634602.1| lytic transglycosylase catalytic [Chloroflexus aurantiacus J-10-fl]
 gi|222524349|ref|YP_002568820.1| Lytic transglycosylase catalytic [Chloroflexus sp. Y-400-fl]
 gi|163667847|gb|ABY34213.1| Lytic transglycosylase catalytic [Chloroflexus aurantiacus J-10-fl]
 gi|222448228|gb|ACM52494.1| Lytic transglycosylase catalytic [Chloroflexus sp. Y-400-fl]
          Length = 778

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 43/134 (32%), Gaps = 8/134 (5%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           +      + ++ +      +F+ A           P +  AR++ L        +G   +
Sbjct: 314 EQNPGEALRQRGLARRALGDFAGALADLAAAREREPDSDTARQAALDWIQTYGQSGATAE 373

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           AA+L  +Y    P+          + +  A  + D   D  A          + +RY  +
Sbjct: 374 AAALYRQYADDQPDDPRAP-----IALDRAAQLYDRLGDSAA---ATATRLELGQRYPTT 425

Query: 173 PYVKGARFYVTVGR 186
                A   + + R
Sbjct: 426 TVGLTALHRIALAR 439


>gi|326934011|ref|XP_003213090.1| PREDICTED: cell division cycle protein 27 homolog [Meleagris
           gallopavo]
          Length = 882

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 51/196 (26%), Gaps = 50/196 (25%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 636 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 685

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP-------YVKGARFY 181
           N    +Y +GM Y +        Q    L   +  + ++    S         V+ A   
Sbjct: 686 N---AWYGLGMIYYK--------QEKFSLAEMHFQKALDINPQSSVLLCHIGVVQHALKK 734

Query: 182 VTVGRNQLAAKEVEI-----------GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
                + L  K + I                   +Y +A+   + +              
Sbjct: 735 SEKALDTL-NKAINIDPKNPLCKFHRASVLFANEKYKSALQELEELKQIVPKESLVY--- 790

Query: 231 ARLVEAYVALALMDEA 246
             + + Y  L     A
Sbjct: 791 FLIGKVYKKLGQTHLA 806


>gi|317407010|gb|EFV87042.1| hypothetical protein HMPREF0005_05858 [Achromobacter xylosoxidans
           C54]
          Length = 386

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 9/70 (12%), Positives = 22/70 (31%), Gaps = 8/70 (11%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y K     +  +++ A   F+             ++       Q    +Y  A +  ++ 
Sbjct: 244 YWKGRAAYEAGDYAAALTAFSALD--------TPQAHFYVGNCQTRLRQYDAALAAYDKA 295

Query: 121 ITQYPESKNV 130
           +   PE  + 
Sbjct: 296 LALRPEWPDA 305


>gi|313902667|ref|ZP_07836066.1| protein serine phosphatase with GAF(s) sensor(s) [Thermaerobacter
           subterraneus DSM 13965]
 gi|313467105|gb|EFR62620.1| protein serine phosphatase with GAF(s) sensor(s) [Thermaerobacter
           subterraneus DSM 13965]
          Length = 868

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 78/224 (34%), Gaps = 31/224 (13%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR---DFPFAGVARKS-L 97
            + DV  D        R + E+ +  + E++   A   F + S     +     A+    
Sbjct: 10  PTADVNADRALHAASMRRLVERGLQAMDERDGLTALNCFQRASDMAFKYRLGAEAQAGTQ 69

Query: 98  LMSAFVQYSAGKYQQAASLGEEYIT---QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           L  A      G  + AAS+ +  +      P+ + +  V+ ++G  +    R      R 
Sbjct: 70  LNLALAYRLIGDLEGAASVLQRLLQGDDLVPDQRAM--VWNILGTVHFASGRY-----RP 122

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA---IP 211
               L    R++            R YV+  R ++A     +   YL+      A     
Sbjct: 123 AAHALLRAWRLMRN----------RRYVSELRVEVAGN---LATVYLELRRPTRALTWAS 169

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           R      + +   H + A  +L+ A +AL   + A   ++ ++ 
Sbjct: 170 RAAWQARH-AGTPHRQFATLQLIAARLALGETERAARGIARLER 212


>gi|310778302|ref|YP_003966635.1| hypothetical protein Ilyop_0499 [Ilyobacter polytropus DSM 2926]
 gi|309747625|gb|ADO82287.1| hypothetical protein Ilyop_0499 [Ilyobacter polytropus DSM 2926]
          Length = 503

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 59/157 (37%), Gaps = 26/157 (16%)

Query: 44  RDVYLDSVTDVRYQREVYEKAV----------LFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
             V  D V  ++ +RE+Y +A              + +N+ +A  ++ +       A   
Sbjct: 359 SKVSEDKVHQLKKEREIYHRAKLIKKEVDLGDEKYQGENYEEAVLFYKRAEEKDIEAARK 418

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY----VYYLVGMSYAQMIRDVP 149
             + +      Y   +Y+ AA+  E+ +    ES+        + YL G+ Y +M     
Sbjct: 419 LDTDMKIGMSYYYITRYEDAANYFEKAM----ESEKTPMKKAEIAYLTGVCYYRMQDK-- 472

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
                 +  ++   ++ + Y  + + K A  Y+   R
Sbjct: 473 ------EKSMKTFEKLAKDYPGTTWSKKAMVYIIRLR 503



 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 11/74 (14%), Positives = 26/74 (35%)

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           +++IG  Y     Y  A   F+  + +        E        Y  +   +++ +    
Sbjct: 422 DMKIGMSYYYITRYEDAANYFEKAMESEKTPMKKAEIAYLTGVCYYRMQDKEKSMKTFEK 481

Query: 253 IQERYPQGYWARYV 266
           + + YP   W++  
Sbjct: 482 LAKDYPGTTWSKKA 495


>gi|238495490|ref|XP_002378981.1| mitochondrial outer membrane translocase receptor (TOM70), putative
           [Aspergillus flavus NRRL3357]
 gi|220695631|gb|EED51974.1| mitochondrial outer membrane translocase receptor (TOM70), putative
           [Aspergillus flavus NRRL3357]
          Length = 638

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 47/141 (33%), Gaps = 20/141 (14%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGV 92
           +G +  ++ D  L    +       Y +A L      F++A + + +     R F ++  
Sbjct: 398 LGNKDAAADDFELAISHNKDDADIYYHRAQLHFILGEFAEAAKDYQKSIDLDRTFIYSH- 456

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
                +     QY  G    A +     +  +   ++V  VY            ++  DQ
Sbjct: 457 -----IQLGVTQYKMGSVASAMATFRRSVKNF---EDVPDVY--------NYYGELLLDQ 500

Query: 153 RATKLMLQYMSRIVERYTNSP 173
           +     ++   + VE    S 
Sbjct: 501 QNFSEAIEKFDKAVEMEKQSK 521


>gi|170078504|ref|YP_001735142.1| TPR domain-containing protein [Synechococcus sp. PCC 7002]
 gi|169886173|gb|ACA99886.1| TPR domain protein [Synechococcus sp. PCC 7002]
          Length = 267

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 31/291 (10%), Positives = 82/291 (28%), Gaps = 69/291 (23%)

Query: 11  IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKE 70
           + +     ++ F  ++   I++C+       +           +     + + A+   K+
Sbjct: 1   MSDLSMRPIFSFLCSLLLWISLCWPSVALTNA----------QISEGDRLTQTAIQAAKK 50

Query: 71  QNFSKAYEYFNQCSRDFPFAG--VA----RKSLLMSAFV------------------QY- 105
            +   A + ++     FP      +     ++ L                        + 
Sbjct: 51  GDLFTAEKIWSDLIEAFPQNPALWSNRGNTRASLNQFDAALDDLNEAIRLAPNQVEPYFN 110

Query: 106 ------SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
                    ++ +A +  ++ I   P+ + +   Y+  G +Y  +           +   
Sbjct: 111 RGAILEQQQRFSEAIADYDKAIELDPQ-EAI--AYHNRGNAYGSL--------GNWEQAR 159

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
           Q   +  E      +   +          LA  +V         GE   AI R + ++  
Sbjct: 160 QDYQKATELDPRFAWAAESYA--------LALYQV---------GENNQAIQRMKGLVRK 202

Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
           Y     A  A+  ++         +      + + +RY    W   +    
Sbjct: 203 YPMFADARVALTAMLWGNHQFGEAESNWVAAAGLDDRYRDLEWLEDIRRFP 253


>gi|110834719|ref|YP_693578.1| hypothetical protein ABO_1858 [Alcanivorax borkumensis SK2]
 gi|110647830|emb|CAL17306.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
          Length = 207

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 7/98 (7%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY--EYF 80
           A  I   +AV  L+GW     R+             + Y+  V  L  Q   +A   +  
Sbjct: 21  ATIITVVLAVAALIGW-----REWQDHQGEQSAEASKHYQVMVEALTAQEVDEATVNQKA 75

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
                +FP +  A  + L  A +   AG Y+ AASL +
Sbjct: 76  EALKENFPGSAYANYANLAQARLAVQAGDYESAASLLQ 113


>gi|94971671|ref|YP_593719.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94553721|gb|ABF43645.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
           Ellin345]
          Length = 349

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 19/154 (12%), Positives = 43/154 (27%), Gaps = 35/154 (22%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFP-----FAGVARK-----------------SLLMSA 101
           A  +L  + +  A + + +     P         A+                  + L  A
Sbjct: 182 ADAYLGAKRYPDAVKAYEKAIALDPSKAPVHNNYAQALAKTGQSDKAIAEYDAAAKLDPA 241

Query: 102 FV---QYS-------AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
                 ++       AGK   A +  ++ I            YY  G++           
Sbjct: 242 HAGSFYFNEGAVLTNAGKTDDANAAFDKAIA---ADPTKADAYYQKGVNLMGKATQKDGK 298

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
             A    ++  ++ +E   + P  + A+  +   
Sbjct: 299 YVAAPGTVEAFNKYLELSPDGPNAQNAKDMIAAL 332



 Score = 35.9 bits (82), Expect = 5.5,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 23/79 (29%), Gaps = 11/79 (13%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++A   ++ +NF  A +   + +          A       A     A +Y  A    E+
Sbjct: 146 KEAQADMQAKNFDAAIQIMEKATAQDATHDIIWAV-----LADAYLGAKRYPDAVKAYEK 200

Query: 120 YITQYPE----SKNVDYVY 134
            I   P       N     
Sbjct: 201 AIALDPSKAPVHNNYAQAL 219


>gi|17229312|ref|NP_485860.1| hypothetical protein all1820 [Nostoc sp. PCC 7120]
 gi|17130910|dbj|BAB73519.1| all1820 [Nostoc sp. PCC 7120]
          Length = 1009

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 82/261 (31%), Gaps = 70/261 (26%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEK--AVLFLKE--QNFSKA 76
             LT+  ++A   L      ++ +    +V  +   +  +Y+    V  L+   +NF +A
Sbjct: 6   IPLTLILTLASPSLAQAPTPTTEEQITQAVMLNSSGESLIYKDFFGVGELQAALENFQQA 65

Query: 77  YEYFNQCSRDFPFAGVARKS--LLMSAFVQYSAGKYQQAASLGE------EYITQYPESK 128
              F +      +   A ++  L+   +V +   +Y +A    +        I    +++
Sbjct: 66  LAIFKK------YGAKAGEANSLVNIGYVYFRKAEYGKALEYFQSSLDIRRKIKD-RQNE 118

Query: 129 NVD-------YV---YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
            +        YV    Y   + Y Q               L  +  +     NS     A
Sbjct: 119 WIPLSYIGEVYVNLGQYPKALEYYQ-------------PALAIIKELKAA--NSKDSSYA 163

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA--------- 229
               T+  +        IG  Y + G+Y  A       L  Y      ++A         
Sbjct: 164 TSEKTLLAD--------IGAVYFRMGQYTKA-------LDFYQQTLAMQKADDDKIGGIQ 208

Query: 230 -MARLVEAYVALALMDEAREV 249
            +  +   YV L    +A + 
Sbjct: 209 TLNNIGVVYVNLGNYKQALDA 229


>gi|330952763|gb|EGH53023.1| TPR repeat-containing von Willebrand factor, type A [Pseudomonas
           syringae Cit 7]
          Length = 572

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 22/170 (12%), Positives = 50/170 (29%), Gaps = 34/170 (20%)

Query: 8   AICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY----EK 63
            +   + WA Q +   L + F  A+    GW             +     ++++    ++
Sbjct: 299 QVVQLDTWADQGHWLLLPLIFIAALAGRRGWLFCLPLIFMFPQNSQAFEFQDLWLRPDQQ 358

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
               L++   ++A + F         +              Y A  Y  A     ++   
Sbjct: 359 GQRLLEQHRPAEAAQRFED-------SRW-------KGVALYQAQDYASA---ARQFAE- 400

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
              +   D  +Y  G + A+               L    + ++R  + P
Sbjct: 401 --GNSAAD--HYNRGNALARN--------GELAAALDAYEQALDRQPDFP 438


>gi|157384230|gb|ABV49466.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 23 [Homo sapiens]
          Length = 1052

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLXVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|301609916|ref|XP_002934497.1| PREDICTED: tetratricopeptide repeat protein 13 [Xenopus (Silurana)
           tropicalis]
          Length = 839

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 70/234 (29%), Gaps = 52/234 (22%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP------FAG---VARKSLLMSAFV 103
           D     E+     + +      +A ++F+   ++ P      +      ARK L      
Sbjct: 120 DDDTNEEL-AIGYVLIGSGLQDEAIKHFSSMLQEEPDLVSAIYGRGIAYARKGLQDI--- 175

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
                  + A       I+  P+   V            +   ++          L  ++
Sbjct: 176 ----KNAELALFELSRVISLEPDHPEV-----------FEQRAEILSPLGRISEALSDLT 220

Query: 164 RIVERYTNSP-YVKGARFYVTVGRNQLAAKE----------------VEIGRYYLKRGEY 206
           R ++   ++  Y      +     + LAA+E                +  G  +  RG  
Sbjct: 221 RAIQLQPSARLYRHRGTLHFI-SEDYLAAQEDFQRSLGLNQNQPIAVLYKGLTFFHRGLL 279

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS---LIQERY 257
             AI  F+  L     +    EA   L +AY  L   + A E      ++ + +
Sbjct: 280 KEAIDSFKEALK--QKSNFI-EAYKSLGQAYRELGNFEAAMENFQKALMLNQNH 330


>gi|183179365|ref|ZP_02957576.1| GGDEF family protein [Vibrio cholerae MZO-3]
 gi|183012776|gb|EDT88076.1| GGDEF family protein [Vibrio cholerae MZO-3]
          Length = 667

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 72/212 (33%), Gaps = 32/212 (15%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQ-CSRDFPFAG--VARKSLLMS 100
           D+ L  + D      +Y    L +     +  A +Y N+            +  +     
Sbjct: 215 DLLLSLLPDYVDPSGIYNDVGLLMGTLGQYESALDYLNKALEYRLEQGNPLLIAQVEHSL 274

Query: 101 AFVQYSAGKYQQAASLGEEYITQY--PES--KNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
               +  G+Y+++    E+    +  P +    + YV+  +G +Y ++   V  DQ    
Sbjct: 275 GDTYFKQGRYEESILYFEQ-AKAHLTPANYLFGLAYVHLGLGKAYVELNNFVEGDQ-HLF 332

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             L+Y++          +       +      LA        +  K  +Y  AI      
Sbjct: 333 QALEYVN---------QHKDQHLQGLIYL--SLAQ-----AHF--KEQKYAQAIDYANQA 374

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           +A  S++           +AY+ LA + EA +
Sbjct: 375 VA-ISESASLPR---IKAQAYLQLAKIAEAEQ 402


>gi|91215455|ref|ZP_01252426.1| TPR domain protein [Psychroflexus torquis ATCC 700755]
 gi|91186407|gb|EAS72779.1| TPR domain protein [Psychroflexus torquis ATCC 700755]
          Length = 842

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 44/136 (32%), Gaps = 23/136 (16%)

Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
           +   D  + L+G +     R VP             S I+  Y  S  +  A+ +V    
Sbjct: 114 NPQTDEAFLLLGKARYYDQRFVP--------AKDAFSFILNHYPESSTINEAKIWVEKVN 165

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE-HAEEAMARLVEAYVALALMDE 245
            +L   E+              AI     ++         + EA + L +AY+A     +
Sbjct: 166 LRLEYFEM--------------AIDNLTELINTTQLTPLESYEATSTLAQAYIADNKQRQ 211

Query: 246 AREVVSLIQERYPQGY 261
           A   + +  +  P   
Sbjct: 212 ALSPLKIAIQNAPDDE 227


>gi|88803527|ref|ZP_01119052.1| TPR-domain containing protein [Polaribacter irgensii 23-P]
 gi|88780539|gb|EAR11719.1| TPR-domain containing protein [Polaribacter irgensii 23-P]
          Length = 993

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 75/217 (34%), Gaps = 27/217 (12%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA--FVQYS 106
            S T    +R  Y +A    + Q + +A + F   S       +A  + L  A  +  + 
Sbjct: 438 KSTTKKIKERSGYWEAETLYRMQKYQEALDGFLSLSTAKKSKEIADFADLSYAIGYSYFK 497

Query: 107 AGKYQQAASLGEEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
             +YQ A +    ++     S  + +  +  +G S   +           K  +   +++
Sbjct: 498 LEEYQNAGNYFTAFLEIKTISDALKFDAFLRLGDSNFAL--------GKYKEAIASYTKV 549

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           V+      Y   A           A    +IG  Y       A I   + V+   S++  
Sbjct: 550 VD-----KYGLDA-----------AYASYQIGMSYGFTTNQKAKITALKKVINAGSNSNL 593

Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
            ++A+  L   Y  L     A    +L+ + +P+  +
Sbjct: 594 KDDALYELGNTYSKLKEEGNAHFYYNLLLKNHPKSIF 630


>gi|46124601|ref|XP_386854.1| hypothetical protein FG06678.1 [Gibberella zeae PH-1]
          Length = 698

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 27/71 (38%), Gaps = 3/71 (4%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
            ++T              F KE+N+ KA E +++    FPF+      L   A    S G
Sbjct: 188 PTITPEEDAESYKNAGNRFFKEKNYYKAIEQYSKAVDLFPFSA---TYLGNRAAAYMSNG 244

Query: 109 KYQQAASLGEE 119
           +++ A      
Sbjct: 245 QFEHALDDCSR 255


>gi|332665963|ref|YP_004448751.1| hypothetical protein Halhy_4030 [Haliscomenobacter hydrossis DSM
           1100]
 gi|332334777|gb|AEE51878.1| Tetratricopeptide TPR_2 repeat-containing protein
           [Haliscomenobacter hydrossis DSM 1100]
          Length = 604

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 20/133 (15%), Positives = 47/133 (35%), Gaps = 5/133 (3%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
                E Y +A + + +  F++A+   +    ++P   +      + A V      Y QA
Sbjct: 472 TATALEYYAEADMLIFQNRFTEAFSKLDSLIVEYPNHSLEDDVWYLKAKVFTKKRDYAQA 531

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
             + +  I  YP+    D   + +   Y  + +         +   +   ++   ++ S 
Sbjct: 532 GKMYQMIIDNYPDEIRADNSIFALAELYENVNQLNDK-----EKASKLFEKLFIDFSGST 586

Query: 174 YVKGARFYVTVGR 186
           +   AR    + R
Sbjct: 587 FAVEARKRYRLLR 599



 Score = 35.9 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 15/108 (13%), Positives = 38/108 (35%), Gaps = 14/108 (12%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           Q         +  ++  Y N              +           + + K+ +Y  A  
Sbjct: 488 QNRFTEAFSKLDSLIVEYPNHSLEDDV----WYLK----------AKVFTKKRDYAQAGK 533

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            +Q+++ NY D   A+ ++  L E Y  +  +++  +   L ++ +  
Sbjct: 534 MYQMIIDNYPDEIRADNSIFALAELYENVNQLNDKEKASKLFEKLFID 581


>gi|325473179|gb|EGC76375.1| TPR domain-containing protein [Treponema denticola F0402]
          Length = 629

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 72/218 (33%), Gaps = 44/218 (20%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLM 99
           + ++    +   +     +  + V FLK  N + A   F++ S   P +      K  L 
Sbjct: 144 AKQNADAKTRAQMEEVDRLVSEGVNFLKNGNLNSALSSFSKASSKMPDSETSFTAKKYLD 203

Query: 100 SA-----FVQYS--AGKYQQAASLGEEYITQYPESKNVD----YVYYLVGMSYAQMIRDV 148
            A     +       G  ++A S  + YI    +S N D      +Y+        I D 
Sbjct: 204 MASALNDYASAREGTGDAEKALSDADSYIK---KSVNADGQNARAHYV-----YSQIADA 255

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
              Q+  ++    + +      +               N L   E+  G+ Y  RG Y  
Sbjct: 256 ---QKQPQVAFVELEKAQSLDPD---------------NYLYNYEL--GKKYYARGHYQK 295

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
           A   F+  + +       + A   L  +   L L +EA
Sbjct: 296 AKTSFERSVKSNPK---FDNAFFNLGMSCRKLGLENEA 330


>gi|300864617|ref|ZP_07109475.1| TPR repeat protein [Oscillatoria sp. PCC 6506]
 gi|300337366|emb|CBN54623.1| TPR repeat protein [Oscillatoria sp. PCC 6506]
          Length = 561

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/128 (13%), Positives = 44/128 (34%), Gaps = 20/128 (15%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +    L    +++A   F +  +  P      ++          A +Y ++ S  +  
Sbjct: 170 YRQGCTLLHGDRYAEAVAAFERVVKLQPGNA---EAWFYRGLALMKALRYAESVSSYDRA 226

Query: 121 ITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT-NSP---YV 175
           +   PE+    Y  ++  G++  ++ R            +    R+++    +S    Y 
Sbjct: 227 VQLQPEN----YQAWFNRGIALEKLHRYA--------EAVNSYDRVIQLQPGDSEAWFYK 274

Query: 176 KGARFYVT 183
             A  ++ 
Sbjct: 275 GMALKHLR 282


>gi|254569410|ref|XP_002491815.1| Component (70 kDa) of the TOM (translocase of outer membrane)
           complex [Pichia pastoris GS115]
 gi|238031612|emb|CAY69535.1| Component (70 kDa) of the TOM (translocase of outer membrane)
           complex [Pichia pastoris GS115]
 gi|328351685|emb|CCA38084.1| similar to outer mitochondrial membrane translocase [Pichia
           pastoris CBS 7435]
          Length = 605

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 29/78 (37%), Gaps = 9/78 (11%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
               Y++  L     + + A E F  C R  P       + +  A + Y  GK ++A   
Sbjct: 382 PDIYYQRGQLSYLRGDLANASENFETCKRLNPKNVY---AYIQLACISYREGKIEEAV-- 436

Query: 117 GEEYI---TQYPESKNVD 131
            E ++     +P S  V 
Sbjct: 437 -ERFVQAKRTFPTSPEVP 453


>gi|262196972|ref|YP_003268181.1| hypothetical protein Hoch_3788 [Haliangium ochraceum DSM 14365]
 gi|262080319|gb|ACY16288.1| Tetratricopeptide TPR_2 repeat protein [Haliangium ochraceum DSM
           14365]
          Length = 360

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 24/58 (41%), Gaps = 4/58 (6%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           ++ +    ++E+N+++A E F       P    +  +LL     +   G+   A +  
Sbjct: 50  LFNQGRALMQERNYAEACEKFAASHELDP----SVGALLNLGDCREKNGQTATAWATY 103


>gi|195998540|ref|XP_002109138.1| hypothetical protein TRIADDRAFT_52860 [Trichoplax adhaerens]
 gi|190587262|gb|EDV27304.1| hypothetical protein TRIADDRAFT_52860 [Trichoplax adhaerens]
          Length = 753

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 70/218 (32%), Gaps = 57/218 (26%)

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP-----ESKNVDYV 133
           Y  + S   P   +A K  ++   + +  G Y QA ++ ++ +  Y      +  N+  V
Sbjct: 383 YLEKLSDKHP--NLA-KVYIILGNIYHDHGNYLQALNMYQKSLQIYRLVYDYDHPNIATV 439

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
           Y  +   Y Q        Q         ++  ++ Y         +  +      +A   
Sbjct: 440 YKKIATIYYQ--------QEKYDNAFFELTAALKIY---------QQMLDKDHPLIADLH 482

Query: 194 VEIGRYYLKRGEYVAAI----------------------PRFQLVLANYSDAEHAEEAMA 231
            EIGR Y K+G++  AI                        F+ +   Y      ++A+ 
Sbjct: 483 NEIGRIYAKQGKFDDAISVCRKSLQIILNQMGKKHKYAAKTFEYLAIAYYTTSQYDKALP 542

Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQ-GYWARYVET 268
           +  +A   L           L  E +P+     + +  
Sbjct: 543 KYEKAVSIL---------FDLFGENHPEISRLYKDIAN 571


>gi|170288582|ref|YP_001738820.1| TPR repeat-containing protein [Thermotoga sp. RQ2]
 gi|170176085|gb|ACB09137.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga sp. RQ2]
          Length = 272

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 26/68 (38%), Gaps = 1/68 (1%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-KSLLMSAFVQYSAGKYQQ 112
           V    ++Y  A+    E ++ +A E F    R+ P          L      Y+ G Y++
Sbjct: 11  VSVANDLYSNALSAYLEGDYRRALELFENALREDPTIEERDSLVKLKMGICAYAIGDYEK 70

Query: 113 AASLGEEY 120
           A +    +
Sbjct: 71  ARAYLSNF 78


>gi|229586478|ref|YP_002844979.1| hypothetical protein RAF_ORF0290 [Rickettsia africae ESF-5]
 gi|228021528|gb|ACP53236.1| Unknown [Rickettsia africae ESF-5]
          Length = 245

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 18/46 (39%)

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
             A   Y   K  +A    + +I +YP S  +   Y+  G  + + 
Sbjct: 122 DLALAAYKDNKLTEAKDKFKHFIQKYPNSLLISNAYFWYGECFFKQ 167



 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 15/133 (11%), Positives = 45/133 (33%), Gaps = 12/133 (9%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D+   ++ Y+ A+   K+   ++A + F    + +P + +   +        +    Y  
Sbjct: 113 DIAPDKQAYDLALAAYKDNKLTEAKDKFKHFIQKYPNSLLISNAYFWYGECFFKQKDYNG 172

Query: 113 AASLG-EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           AA    + Y    P+          + +S  ++        + T+     +++  + +  
Sbjct: 173 AAVNYLKGYKEL-PKGAKSSDGLLKLALSLGEL--------KKTQEACNMLAKFDKEFPT 223

Query: 172 SPYVKGARFYVTV 184
           +     A   +  
Sbjct: 224 NR--TAASKKMAE 234


>gi|197124861|ref|YP_002136812.1| hypothetical protein AnaeK_4481 [Anaeromyxobacter sp. K]
 gi|196174710|gb|ACG75683.1| conserved hypothetical protein [Anaeromyxobacter sp. K]
          Length = 291

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 38/128 (29%), Gaps = 25/128 (19%)

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ-RATKLMLQY 161
                G YQ A +     I+ +P            G      + D+  D+       +  
Sbjct: 78  SYLELGDYQSALAYYRRIISLHPGGPEAHEA---RG-----RLGDIFRDRYGDHLAAITQ 129

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
            + +     +SP                   ++E+   YL    +  A    +++   + 
Sbjct: 130 YADVAGS--DSPDAP--------------RYQLEVAHEYLALKRWEQARTEARILREKWP 173

Query: 222 DAEHAEEA 229
             E A+EA
Sbjct: 174 THELADEA 181


>gi|148237288|ref|NP_001084796.1| hypothetical protein LOC431836 [Xenopus laevis]
 gi|118835718|gb|AAI28925.1| LOC431836 protein [Xenopus laevis]
          Length = 495

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 57/188 (30%), Gaps = 28/188 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           E     L     ++A  +++      P  +    +++ +  A      GK++ A      
Sbjct: 42  EMGRKLLAAGQLAEALTHYHAAVDGDPNNYLTYYKRAAVYLA-----MGKFRSALPDLSR 96

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            I   P+            ++      ++   Q   +   Q    +++    +   +   
Sbjct: 97  AIQLKPDF-----------LAARLQRGNILLKQGDVQEARQDFLSVLQSSPTNEEAQSQL 145

Query: 180 FYVTVG-RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
             V    RN   A E        +R +Y  AI   + V+     +     A     E Y+
Sbjct: 146 ERVQEVERNVGGASEAY------ERRDYYGAIALLEKVIEF---SPWDPSARELRAECYL 196

Query: 239 ALALMDEA 246
            +  +  A
Sbjct: 197 QVGELSNA 204


>gi|62739321|gb|AAH94088.1| LOC431836 protein [Xenopus laevis]
          Length = 511

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 57/188 (30%), Gaps = 28/188 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           E     L     ++A  +++      P  +    +++ +  A      GK++ A      
Sbjct: 58  EMGRKLLAAGQLAEALTHYHAAVDGDPNNYLTYYKRAAVYLA-----MGKFRSALPDLSR 112

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            I   P+            ++      ++   Q   +   Q    +++    +   +   
Sbjct: 113 AIQLKPDF-----------LAARLQRGNILLKQGDVQEARQDFLSVLQSSPTNEEAQSQL 161

Query: 180 FYVTVG-RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
             V    RN   A E        +R +Y  AI   + V+     +     A     E Y+
Sbjct: 162 ERVQEVERNVGGASEAY------ERRDYYGAIALLEKVIEF---SPWDPSARELRAECYL 212

Query: 239 ALALMDEA 246
            +  +  A
Sbjct: 213 QVGELSNA 220


>gi|119357879|ref|YP_912523.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266]
 gi|119355228|gb|ABL66099.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeobacteroides
           DSM 266]
          Length = 201

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 55/164 (33%), Gaps = 33/164 (20%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           + +          +Y +A     + +   P+ + V              +  V ++Q+  
Sbjct: 53  ASIKLGTAYARNRQYAEADKAFTDALALDPKIEEV-----------YAALGAVAFNQKKY 101

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
              L+Y +       +              RN       ++G  YL+  +Y  AI  ++ 
Sbjct: 102 DRALKYFNTYRSFSPD-----------DSLRN------YDVGNVYLQMKKYEPAIAAYRK 144

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI--QERY 257
            +AN   +   EEA   L   Y      DEA E+ + +  +  Y
Sbjct: 145 AIAN---STAFEEAYYNLGFCYARSGRNDEAVEIYNWLVSKNNY 185



 Score = 35.9 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 39/106 (36%), Gaps = 7/106 (6%)

Query: 43  SRDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           +   + D++       EVY     +   ++ + +A +YFN       F+           
Sbjct: 70  ADKAFTDALALDPKIEEVYAALGAVAFNQKKYDRALKYFNTYRS---FSPDDSLRNYDVG 126

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
            V     KY+ A +   + I     S   +  YY +G  YA+  R+
Sbjct: 127 NVYLQMKKYEPAIAAYRKAIA---NSTAFEEAYYNLGFCYARSGRN 169


>gi|332828713|gb|EGK01405.1| hypothetical protein HMPREF9455_02238 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 274

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 38/120 (31%), Gaps = 15/120 (12%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK----AVLFLKEQNFS 74
           + +  L+  F  A+  +     Q S  V  DS+   +  ++  E     A +   E +F 
Sbjct: 1   MKRIILSCLFIFAIYSVA--YAQDSISVVSDSLAIAKVSQQQSETSSDPATIAYNEGDFR 58

Query: 75  KAYEYFNQ-----CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
           KA E           +       + +         +    +  A    E+ +   P  ++
Sbjct: 59  KAIEILEAQKTEQLEK----GLESAQLYYNLGNAYFRVNDFAHARLNYEKALLLDPGDRD 114


>gi|309792802|ref|ZP_07687245.1| protein kinase [Oscillochloris trichoides DG6]
 gi|308225166|gb|EFO78951.1| protein kinase [Oscillochloris trichoides DG6]
          Length = 846

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 39/117 (33%), Gaps = 17/117 (14%)

Query: 71  QNFSKAYEYFNQCSRDFPFAG--VARKSLLMS---AFVQYSAGKYQQAASLGEEYITQYP 125
            N  +A   +       P     +A ++ L      +        +QA +  E  +   P
Sbjct: 446 GNADEALRIYTAALDRNPDNPALLAARAQLYIWWDVYTY-----TEQARADIEAALALDP 500

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
           +     YV      + A++I     D ++ +  LQ + R +E   N      A   +
Sbjct: 501 QH-APAYV------ARAELIAMTTEDDQSHRQALQDLDRAIELDPNLMAAYIAHARL 550


>gi|86211235|gb|ABC87284.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 29 [Homo sapiens]
          Length = 1095

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKGAYEQLLQT 231


>gi|194761720|ref|XP_001963076.1| GF14122 [Drosophila ananassae]
 gi|190616773|gb|EDV32297.1| GF14122 [Drosophila ananassae]
          Length = 1305

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 32/90 (35%), Gaps = 11/90 (12%)

Query: 109 KYQQAASLGEEYITQYPESKNVDYVY-YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           +Y +A S  ++Y+     +   ++ + Y +G++Y ++        R  K  ++    ++ 
Sbjct: 127 EYSEALSAYQKYLRFRENNYWTNHAFIYGIGVAYFKL--------RCFKWAIKSFQELLY 178

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
              N          + +        E  I 
Sbjct: 179 LSPNFTCANEVHLRLGLMLKHCG--EFHIA 206


>gi|163750973|ref|ZP_02158205.1| hypothetical protein KT99_07538 [Shewanella benthica KT99]
 gi|161329263|gb|EDQ00261.1| hypothetical protein KT99_07538 [Shewanella benthica KT99]
          Length = 404

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 8/54 (14%), Positives = 16/54 (29%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
             A   L+ +++  A                  ++  M  +  Y   +YQ A  
Sbjct: 101 NLANAQLQAEHYQAAINTLEPLDLSDNDRSFQSQAHYMQGYAYYQLSQYQAALD 154


>gi|154282041|ref|XP_001541833.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150412012|gb|EDN07400.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 978

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 20/143 (13%), Positives = 44/143 (30%), Gaps = 22/143 (15%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108
            D    +  Y     ++ +  + KAYE + Q        P              + Y   
Sbjct: 333 ADNSDAQSWYLLGRCYMSQAKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIN 386

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +Y+ A       I   P    +  V+Y +G +  +   +   D       L    R  + 
Sbjct: 387 QYRDALDAYSRAIRLNP---YISEVWYDLG-TLYESCNNQTND------ALDAYRRAADL 436

Query: 169 YTNSPYVKGARFYVTVGRNQLAA 191
              + ++   +  + + ++  A 
Sbjct: 437 DPTNTHI---KSRLQLLQSGQAG 456


>gi|78223606|ref|YP_385353.1| tetratricopeptide TPR_4 [Geobacter metallireducens GS-15]
 gi|78194861|gb|ABB32628.1| Tetratricopeptide TPR_4 [Geobacter metallireducens GS-15]
          Length = 267

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 61/184 (33%), Gaps = 34/184 (18%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
                +E     A + + +  +  P       +L     +++  G+Y++A +  +  +  
Sbjct: 46  GEALSEEGKLQDALKEYEKGLKLAP---DDLDALTAVGDIKFELGQYKEALAAYQRVVAL 102

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
            P++ +    +  +G+ Y  + R        T+  ++   + +E    +           
Sbjct: 103 DPDNSD---AHVNIGLVYNSLER--------TQKAIKAFEKALEIDPAN----------V 141

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
              N L       G  +    E+  AI  FQ  +    D   A      L E Y  L   
Sbjct: 142 FAYNGL-------GDAWYGLDEHEKAIAAFQKGIELDPDDAAAH---FNLGELYYDLGEH 191

Query: 244 DEAR 247
           DEA 
Sbjct: 192 DEAE 195


>gi|45550177|ref|NP_609368.3| Utx, isoform A [Drosophila melanogaster]
 gi|21744241|gb|AAM76179.1| LD05703p [Drosophila melanogaster]
 gi|33589582|gb|AAQ22558.1| LD02225p [Drosophila melanogaster]
 gi|45445077|gb|AAF52897.3| Utx, isoform A [Drosophila melanogaster]
 gi|220950358|gb|ACL87722.1| CG5640-PA [synthetic construct]
          Length = 1136

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 32/90 (35%), Gaps = 11/90 (12%)

Query: 109 KYQQAASLGEEYITQYPESKNVDYVY-YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           +Y +A S  ++Y+     +   ++ + Y +G++Y ++        R  K  ++    ++ 
Sbjct: 129 EYSEALSAYQKYLRFRENNYWTNHAFIYGIGVAYFKL--------RCFKWAIKSFQELLY 180

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
              N          + +        E  I 
Sbjct: 181 LSPNFTCANEVHLRLGLMLKHCG--EFHIA 208


>gi|148269897|ref|YP_001244357.1| TPR repeat-containing protein [Thermotoga petrophila RKU-1]
 gi|61657380|emb|CAI44296.1| hypothetical protein [Thermotoga petrophila]
 gi|147735441|gb|ABQ46781.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga petrophila
           RKU-1]
          Length = 278

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 26/68 (38%), Gaps = 1/68 (1%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-KSLLMSAFVQYSAGKYQQ 112
           V    ++Y  A+    E ++ +A E F    R+ P          L      Y+ G Y++
Sbjct: 17  VSVANDLYSNALSAYLEGDYRRALELFENALREDPTIEERDSLVKLKMGICAYAIGDYEK 76

Query: 113 AASLGEEY 120
           A +    +
Sbjct: 77  ARAYLSNF 84


>gi|332702922|ref|ZP_08423010.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfovibrio
           africanus str. Walvis Bay]
 gi|332553071|gb|EGJ50115.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfovibrio
           africanus str. Walvis Bay]
          Length = 474

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 11/85 (12%), Positives = 25/85 (29%), Gaps = 3/85 (3%)

Query: 50  SVTDVRYQREV--YEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYS 106
              D+  + E+  Y  A+ F+  + +  A          +  F             + + 
Sbjct: 353 KALDIAPEDEIIRYNLALAFMDGEEYENAAAEVERALVTNGEFGQDNDTVCFNLGHIFWR 412

Query: 107 AGKYQQAASLGEEYITQYPESKNVD 131
           AG    A     + +   P+ +   
Sbjct: 413 AGNLPMAMFYFTQTLKLNPDHEEAA 437


>gi|325925872|ref|ZP_08187241.1| family 3 adenylate cyclase [Xanthomonas perforans 91-118]
 gi|325543703|gb|EGD15117.1| family 3 adenylate cyclase [Xanthomonas perforans 91-118]
          Length = 837

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 46/157 (29%), Gaps = 23/157 (14%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
             + +     D  T        Y        E  +  A ++F +     P   +A    +
Sbjct: 396 SIRQNSPALPDVTTSSLDALRAYALGQQRYSEGKYGAALDFFQKAVDIDPHFALAWLGQV 455

Query: 99  MSAFVQYSAGKYQQAASL---GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
                 ++   Y++A       E++ ++ P  +      Y+   S+   I D        
Sbjct: 456 R---AHFANVDYKKATETLRVAEQFKSRLPPRE----ALYVK--SWGVQILDPA------ 500

Query: 156 KLMLQYMSRIVERYTNSPYVK-GARFYVT-VGRNQLA 190
                   ++ E Y +  Y    A   +     N+ A
Sbjct: 501 -QAADSWIQMAELYPD--YAPAQANAAMDLFVANRFA 534


>gi|321453432|gb|EFX64668.1| hypothetical protein DAPPUDRAFT_204585 [Daphnia pulex]
          Length = 1195

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 33/64 (51%), Gaps = 3/64 (4%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           + I   Y+++ +YV+AI  ++  +  +    H  E +  L  A+     + EA+  +SL+
Sbjct: 692 LNIAHIYVEQKQYVSAIQMYENCIRKFFRHPHV-EILQYLSRAHFRAGKLREAK--LSLL 748

Query: 254 QERY 257
           + ++
Sbjct: 749 KAQH 752


>gi|320104304|ref|YP_004179895.1| serine/threonine protein kinase [Isosphaera pallida ATCC 43644]
 gi|319751586|gb|ADV63346.1| serine/threonine protein kinase [Isosphaera pallida ATCC 43644]
          Length = 1497

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 30/80 (37%), Gaps = 11/80 (13%)

Query: 177  GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE-EAMARLVE 235
             AR  V   +  LA              +   A+ RF+ VLA    +     +A+  L E
Sbjct: 947  DARLRVQHDQGLLALH----------LHQPERAVERFRAVLAAAESSLALRAKALGHLAE 996

Query: 236  AYVALALMDEAREVVSLIQE 255
            AY  L L+  A E +  +  
Sbjct: 997  AYEQLGLIPLADETLGQLIA 1016


>gi|284928935|ref|YP_003421457.1| Flp pilus assembly protein TadD [cyanobacterium UCYN-A]
 gi|284809394|gb|ADB95099.1| Flp pilus assembly protein TadD [cyanobacterium UCYN-A]
          Length = 365

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 18/139 (12%), Positives = 41/139 (29%), Gaps = 19/139 (13%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            Y          +   A   +    +  P    + KS +    V      Y  AA     
Sbjct: 112 YYALGHSLANIGDNDNAATAYYYAVQLNP---KSVKSYIGLGVVLLRKEDYDGAAEAYRR 168

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +T  P + N+             ++      Q+  K  ++Y+   V+++      +   
Sbjct: 169 VMTLEPNNPNI-----------FSIMGASLLQQKEFKQAIKYLKSAVKQFP-----RDTE 212

Query: 180 FYVTVGRNQLAAKEVEIGR 198
             + +    L   ++  G+
Sbjct: 213 LRMLLATALLQQGQIFSGK 231


>gi|302412911|ref|XP_003004288.1| glucose repression mediator protein CYC8 [Verticillium albo-atrum
           VaMs.102]
 gi|261356864|gb|EEY19292.1| glucose repression mediator protein CYC8 [Verticillium albo-atrum
           VaMs.102]
          Length = 861

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 41/140 (29%), Gaps = 29/140 (20%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSA 107
             D    +  Y     ++ +Q + KAYE + Q        P              + Y  
Sbjct: 280 AADQNDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQI 333

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +Y+ A       I   P    +  V+Y +G                    L    R  E
Sbjct: 334 NQYRDALDAYSRAIRLNP---FISEVWYDLG--------------TLISDALDAYQRAAE 376

Query: 168 RYTNSPYVKGARFYVTVGRN 187
               +P++   +  + + RN
Sbjct: 377 LDPANPHI---KARLQLLRN 393


>gi|291300567|ref|YP_003511845.1| hypothetical protein Snas_3081 [Stackebrandtia nassauensis DSM
           44728]
 gi|290569787|gb|ADD42752.1| hypothetical protein Snas_3081 [Stackebrandtia nassauensis DSM
           44728]
          Length = 107

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 6/87 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+   LF   ++F  A  +  +     P    AR   ++ A   Y + +  +A S   E 
Sbjct: 7   YDTGKLFFDARDFITAAGWLAEVVDAEPGHEAAR---MLLARAYYHSAQLGRAESQLREI 63

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRD 147
           I + P      Y Y ++G +  +  RD
Sbjct: 64  IERNPVE---AYAYLMLGRTLQRQGRD 87


>gi|198428373|ref|XP_002124751.1| PREDICTED: similar to predicted protein, partial [Ciona
           intestinalis]
          Length = 638

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 11/104 (10%), Positives = 32/104 (30%), Gaps = 21/104 (20%)

Query: 65  VLFLKEQNFSKAYEYFN---QCSRDFPFA----------GVARKSLLMSAFVQYSAGKYQ 111
              +K + + +A        + S  + +             A +   +         ++ 
Sbjct: 109 KTLMKGKRYKEAITNLKNALELSTLYTYGATTSTANEAPPEAAEIHFLLGQCYTEQLQHT 168

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMS-----YAQMIRDVPY 150
           +A     + +   P    +   YY  G+      +++ I+D+  
Sbjct: 169 EALQAYNQALKVNP---ELAEAYYQRGLCRLKLDHSKGIQDLNR 209


>gi|194451266|ref|YP_002045752.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194409570|gb|ACF69789.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
          Length = 389

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 2/62 (3%)

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           A   + +GR Y+ RG+Y  A+   Q V+    D E   E +  L   Y  L    E  E 
Sbjct: 214 ARVSIMMGRVYMARGDYAKAVESLQRVIV--QDKELVSETLEMLQTCYQQLGKNAEWAEF 271

Query: 250 VS 251
           + 
Sbjct: 272 LR 273


>gi|162454221|ref|YP_001616588.1| hypothetical protein sce5944 [Sorangium cellulosum 'So ce 56']
 gi|161164803|emb|CAN96108.1| hypothetical protein sce5944 [Sorangium cellulosum 'So ce 56']
          Length = 1431

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/104 (12%), Positives = 28/104 (26%), Gaps = 11/104 (10%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN-----------FSKAYEYF 80
                       + +    +      R  Y  A    ++             + +A   +
Sbjct: 884 AALTRSCAVSEEQKLKEGDIARPTISRGYYIDAARAFEKAEKMPDGPARVAAWREAAALY 943

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
                  P    A ++ +  A+     G Y QA  +   +I +Y
Sbjct: 944 KVALEKAPARDEAPEAAMNGAYCYKQVGDYDQAIEMYSLFIKEY 987


>gi|158335792|ref|YP_001516966.1| TPR domain-containing protein [Acaryochloris marina MBIC11017]
 gi|158306033|gb|ABW27650.1| TPR domain protein [Acaryochloris marina MBIC11017]
          Length = 432

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 29/83 (34%), Gaps = 10/83 (12%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAFVQYSAGKYQQAASLG 117
           ++++    L+++ ++ A   F Q     PF+     ++ L       Y +G    A    
Sbjct: 5   LFQQGQAQLRQKQYADAIATFTQVLDADPFSIGAYCQRGL-----AYYDSGNVYAAIEDY 59

Query: 118 EEYITQYPESKNVDYVYYLVGMS 140
            + +            YY   ++
Sbjct: 60  GKALEI---DSKSAKAYYCRALA 79


>gi|145504518|ref|XP_001438229.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124405394|emb|CAK70832.1| unnamed protein product [Paramecium tetraurelia]
          Length = 566

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 56/166 (33%), Gaps = 18/166 (10%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            K     K  N++ A   +++  +  P      ++     F   S  KY +A    ++ I
Sbjct: 387 NKGYALFKLNNYNDAIACYDKAIQLEPN---MIRAYNNKGFALMSLNKYSEAIVWIDKAI 443

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVP----YD---QRATKLMLQYMSRIVERYTNSPY 174
              P S      Y++ G +   + +       YD   Q        Y ++    Y+ + Y
Sbjct: 444 QLNPNSATT---YFIKGNALHSLNKSEDAIFCYDKGIQLNPNDATAYFNKGNVLYSLNKY 500

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
            + A      G     +  +     Y  +GE +  I  +   + NY
Sbjct: 501 -EDAIACYDKGIELDPSHAIA----YFNKGEILTFIKNYSSAIENY 541


>gi|86606382|ref|YP_475145.1| TPR repeat-containing protein [Synechococcus sp. JA-3-3Ab]
 gi|86554924|gb|ABC99882.1| tetratricopeptide repeat protein [Synechococcus sp. JA-3-3Ab]
          Length = 110

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/105 (11%), Positives = 36/105 (34%), Gaps = 14/105 (13%)

Query: 68  LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
           +   +   A    ++  +  P    A  + +  ++V     + ++A +  E  I      
Sbjct: 1   MLRGDPVAALADLDRAVQLDP--SYAP-AYVNRSYVYNQLRQPEEALADAERAIQL---D 54

Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
             +   Y+  G++Y Q+           +  +    + +  ++ S
Sbjct: 55  PRIPEAYFSRGVAYLQL--------GDREAAMADFRQALALFSKS 91


>gi|62180273|ref|YP_216690.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|62127906|gb|AAX65609.1| putative N-acetylglucosaminyl transferase [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|322714747|gb|EFZ06318.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
          Length = 389

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 2/62 (3%)

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           A   + +GR Y+ RG+Y  A+   Q V+    D E   E +  L   Y  L    E  E 
Sbjct: 214 ARVSIMMGRVYMARGDYAKAVESLQRVIV--QDKELVSETLEMLQTCYQQLGKNAEWAEF 271

Query: 250 VS 251
           + 
Sbjct: 272 LR 273


>gi|61657512|emb|CAI44423.1| hypothetical protein [Thermotoga sp. RQ2]
          Length = 278

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 26/68 (38%), Gaps = 1/68 (1%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-KSLLMSAFVQYSAGKYQQ 112
           V    ++Y  A+    E ++ +A E F    R+ P          L      Y+ G Y++
Sbjct: 17  VSVANDLYSNALSAYLEGDYRRALELFENALREDPTIEERDSLVKLKMGICAYAIGDYEK 76

Query: 113 AASLGEEY 120
           A +    +
Sbjct: 77  ARAYLSNF 84


>gi|168462824|ref|ZP_02696755.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|195634056|gb|EDX52408.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
          Length = 389

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 2/62 (3%)

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           A   + +GR Y+ RG+Y  A+   Q V+    D E   E +  L   Y  L    E  E 
Sbjct: 214 ARVSIMMGRVYMARGDYAKAVESLQRVIV--QDKELVSETLEMLQTCYQQLGKNAEWAEF 271

Query: 250 VS 251
           + 
Sbjct: 272 LR 273


>gi|168241280|ref|ZP_02666212.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205339167|gb|EDZ25931.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
          Length = 389

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 2/62 (3%)

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           A   + +GR Y+ RG+Y  A+   Q V+    D E   E +  L   Y  L    E  E 
Sbjct: 214 ARVSIMMGRVYMARGDYAKAVESLQRVIV--QDKELVSETLEMLQTCYQQLGKNAEWAEF 271

Query: 250 VS 251
           + 
Sbjct: 272 LR 273


>gi|308535326|ref|YP_002139732.2| TPR domain-containing protein [Geobacter bemidjiensis Bem]
 gi|308052671|gb|ACH39936.2| TPR domain protein [Geobacter bemidjiensis Bem]
          Length = 596

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 42/154 (27%), Gaps = 31/154 (20%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
            V  L + N   A + F +     P   +A               KY QA +  +  IT 
Sbjct: 448 GVALLNQGNTDIAIQEFQKAISIKPNYVLAHN---DLGAAYAKQSKYDQAITEFQTAITI 504

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
            P             + + + + D    Q      ++     +     S           
Sbjct: 505 NP-----------RAVVFHKNLGDTFAQQGNLYAAIREYQIALTLNPGS----------- 542

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
                 A     +G  + + G   AA+  +Q  L
Sbjct: 543 ------AEIHFYLGNAFARLGNIDAAVKEYQTAL 570


>gi|152969830|ref|YP_001334939.1| tetratricopeptide repeat protein [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238894338|ref|YP_002919072.1| tetratricopeptide repeat protein [Klebsiella pneumoniae NTUH-K2044]
 gi|262042993|ref|ZP_06016137.1| tetratricopeptide repeat protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|150954679|gb|ABR76709.1| putative heat shock protein [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238546654|dbj|BAH63005.1| putative heat shock protein [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|259039710|gb|EEW40837.1| tetratricopeptide repeat protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 389

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 58/189 (30%), Gaps = 42/189 (22%)

Query: 64  AVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
              ++    + +A + F Q     DF    + +   +  A        +Q A  + E  +
Sbjct: 114 GRDYMAAGLYDRAEDMFKQLVDETDFRLGALQQLLQIYQA-----TSDWQSAIEVAERLV 168

Query: 122 TQ----YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
                 +             G      I +   +    ++    + +             
Sbjct: 169 KLGKEKH------------RG-----EIANFWCELALQQMAANDLDK-----------AM 200

Query: 178 ARFYVTVGRNQ-LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
           A        ++  A   + +GR ++++G+Y  A+   + V+    D E   E +  L   
Sbjct: 201 ALLRKGAAADRNSARVSIMMGRVWMEKGDYAKAVESLERVID--QDKELVGETLEMLQTC 258

Query: 237 YVALALMDE 245
           Y  L   DE
Sbjct: 259 YQQLGKTDE 267


>gi|134046502|ref|YP_001097987.1| hypothetical protein MmarC5_1476 [Methanococcus maripaludis C5]
 gi|132664127|gb|ABO35773.1| Tetratricopeptide TPR_2 repeat protein [Methanococcus maripaludis
           C5]
          Length = 226

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 38/106 (35%), Gaps = 21/106 (19%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFP--------------FAGVARK 95
           D +   E+YE+   +    ++ KA E +++       +P               +  A +
Sbjct: 25  DSKTTDELYEEGKEYYNNGSYLKAVECYDKVLEMDPKYPRIMLTKNLALSKINRSERAIE 84

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
                 +  Y+ G+Y+ A +  EE +       N  Y     G+ +
Sbjct: 85  YYDNGTY-FYNRGQYENAIACYEEALK---ADPNYTYAVVFKGVVF 126


>gi|17551312|ref|NP_509450.1| human UTX (Ubiquitously transcribed TPR on X) homolog family member
           (utx-1) [Caenorhabditis elegans]
 gi|746479|gb|AAB36864.1| Human utx (ubiquitously transcribed tpr on x) homolog protein 1,
           partially confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 1168

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 9/55 (16%), Positives = 22/55 (40%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
            +++L  + +  A E F +    FP   +A ++ +           Y +  +L +
Sbjct: 136 GLVYLHFKQWKPAIEAFTRLLYSFPTGMIALQAKVRLGVCYMELEDYNRCINLFK 190


>gi|169778217|ref|XP_001823574.1| import receptor subunit tom-70 [Aspergillus oryzae RIB40]
 gi|83772311|dbj|BAE62441.1| unnamed protein product [Aspergillus oryzae]
          Length = 632

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 47/141 (33%), Gaps = 20/141 (14%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGV 92
           +G +  ++ D  L    +       Y +A L      F++A + + +     R F ++  
Sbjct: 392 LGNKDAAADDFELAISHNKDDADIYYHRAQLHFILGEFAEAAKDYQKSIDLDRTFIYSH- 450

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
                +     QY  G    A +     +  +   ++V  VY            ++  DQ
Sbjct: 451 -----IQLGVTQYKMGSVASAMATFRRSVKNF---EDVPDVY--------NYYGELLLDQ 494

Query: 153 RATKLMLQYMSRIVERYTNSP 173
           +     ++   + VE    S 
Sbjct: 495 QNFSEAIEKFDKAVEMEKQSK 515


>gi|67920542|ref|ZP_00514062.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
 gi|67858026|gb|EAM53265.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
          Length = 520

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 32/101 (31%), Gaps = 24/101 (23%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDF--PFAG----VARKSLLMSAFV 103
           D  Y    +   V+      +S+A E   Q           +       +++  L  A  
Sbjct: 395 DSSYLSARFNLGVILGNLGQYSQAIEQLEQVIQAEARHAEAYNSLGFIYSKQRQLDRAIT 454

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
            Y      QA ++  ++             +Y +GM+  Q+
Sbjct: 455 YYR-----QAINVAPKF----------AQAHYNLGMTLLQL 480


>gi|320103811|ref|YP_004179402.1| heat shock protein DnaJ domain-containing protein [Isosphaera
           pallida ATCC 43644]
 gi|319751093|gb|ADV62853.1| heat shock protein DnaJ domain protein [Isosphaera pallida ATCC
           43644]
          Length = 1008

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 6/33 (18%), Positives = 12/33 (36%)

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
           ++   +A   Y    Y  A +  +E +   P  
Sbjct: 360 QARFDAADAAYKQRDYAVALAHLDELLRLDPYH 392


>gi|320544884|ref|NP_001188773.1| Utx, isoform D [Drosophila melanogaster]
 gi|318068407|gb|ADV37023.1| Utx, isoform D [Drosophila melanogaster]
          Length = 1130

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 32/90 (35%), Gaps = 11/90 (12%)

Query: 109 KYQQAASLGEEYITQYPESKNVDYVY-YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           +Y +A S  ++Y+     +   ++ + Y +G++Y ++        R  K  ++    ++ 
Sbjct: 129 EYSEALSAYQKYLRFRENNYWTNHAFIYGIGVAYFKL--------RCFKWAIKSFQELLY 180

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
              N          + +        E  I 
Sbjct: 181 LSPNFTCANEVHLRLGLMLKHCG--EFHIA 208


>gi|313228089|emb|CBY23239.1| unnamed protein product [Oikopleura dioica]
          Length = 997

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 59/171 (34%), Gaps = 22/171 (12%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           +  +   A +++++     P +  A ++ L  A      G    A ++  + +    +S 
Sbjct: 607 ERDDADNAVKFYSRAKTISPGSANANQATLKLADAYRLKGDLTSAQAILSKLM----DSD 662

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
                          +I DV  D    +  +Q+  R+ E         G    +    ++
Sbjct: 663 VASQAQ--------SLIADVICDTGNIQGAIQHFKRLFEG---GRDQWGILGRMMPLLHR 711

Query: 189 LAAKEVEIGRYYLKR---GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
              +++++   Y+K        AA      +L  Y      E AM  L++A
Sbjct: 712 --NRQLDVAHQYVKNIKDNSSPAAKAYCLGMLDAYQL--RTESAMIHLLQA 758


>gi|302186719|ref|ZP_07263392.1| TPR repeat-containing protein [Pseudomonas syringae pv. syringae
           642]
          Length = 338

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 10/99 (10%), Positives = 35/99 (35%), Gaps = 14/99 (14%)

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
            ++ E F +  +  P +    ++ L  A +    G  + A +  +      P +      
Sbjct: 145 QQSAEAFQESLKSQPQSA---QNQLQLARLYLQTGDLEPALAALQRATALDPGNIEA--- 198

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
                +++ +++      +   +      ++++E   +S
Sbjct: 199 ----ALAHIELLDR----KGQAEQARSLFAQLLEHNPDS 229


>gi|296282863|ref|ZP_06860861.1| hypothetical protein CbatJ_04551 [Citromicrobium bathyomarinum
           JL354]
          Length = 323

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 20/105 (19%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
              Q ++  VE+Y +        +  T GRN L       GR +L  G+   A       
Sbjct: 215 EAQQALAAFVEKYPDH-------WRTTYGRNLL-------GRAFLDNGQ---AREAAPWF 257

Query: 217 LANYS---DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           L NY    DA  A +++  L E+ + L   + A   ++   E YP
Sbjct: 258 LKNYQADNDAARAPDSLLYLAESMIELGDTNRACIALAEFSETYP 302


>gi|291279229|ref|YP_003496064.1| hypothetical protein DEFDS_0832 [Deferribacter desulfuricans SSM1]
 gi|290753931|dbj|BAI80308.1| hypothetical protein [Deferribacter desulfuricans SSM1]
          Length = 205

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 45/122 (36%), Gaps = 19/122 (15%)

Query: 70  EQNFSKAYEYFNQC-----SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
           ++ +++  + +           FP      K       ++++   YQ A +  ++Y++  
Sbjct: 89  DKKYNELKKAYQNLSALGMDSQFP------KIYEELGVLEFNKKNYQVALNYFKKYLSTA 142

Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
              + +  VYY    SY Q+   +          + Y  ++++ Y  S Y   A   V  
Sbjct: 143 KNKEEIPKVYYYTAKSYLQLDDKMN--------AVYYFDKLIKEYPKSFYKNLAEKEVKE 194

Query: 185 GR 186
            R
Sbjct: 195 LR 196


>gi|295701041|ref|YP_003608934.1| hypothetical protein BC1002_5497 [Burkholderia sp. CCGE1002]
 gi|295440254|gb|ADG19423.1| TPR repeat-containing protein [Burkholderia sp. CCGE1002]
          Length = 280

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 19/61 (31%), Gaps = 7/61 (11%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
            + +A   F++    FP       +LL    A       +Y  A    E  I   P   +
Sbjct: 196 KYDEALSVFDRALEHFP-----EDALLHFNRAVALEELERYDAAVQAYERCIELNPTHAD 250

Query: 130 V 130
            
Sbjct: 251 A 251


>gi|218248390|ref|YP_002373761.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC
           8801]
 gi|257060287|ref|YP_003138175.1| hypothetical protein Cyan8802_2471 [Cyanothece sp. PCC 8802]
 gi|218168868|gb|ACK67605.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8801]
 gi|256590453|gb|ACV01340.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8802]
          Length = 406

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 44/143 (30%), Gaps = 17/143 (11%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
               Y + +      ++  A   +NQ     P    A  +       +Y+ G  Q A + 
Sbjct: 185 AEAYYNRGLAKSNLGDYQGAISDYNQAIEIKP--DYAA-AYNNRGLTKYNLGDNQGAITD 241

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
             + I   P+  +    YY  G++   +           +  +   ++ ++   +  Y  
Sbjct: 242 YTQAIEIKPDDAD---AYYNRGLAKYNL--------GDKQGAIADYNQAIKIKPD--YAT 288

Query: 177 GARFYVTVGRNQLAAKEVEIGRY 199
                     N L  K+  I  Y
Sbjct: 289 AYNNRGNAKYN-LGDKQGAIADY 310


>gi|167526271|ref|XP_001747469.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163773915|gb|EDQ87549.1| predicted protein [Monosiga brevicollis MX1]
          Length = 682

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 39/120 (32%), Gaps = 23/120 (19%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQ-------CSR--DFPFA-----------GVARKSLLMS 100
           +E+   F K + +++A   + +              P +            +   +LL  
Sbjct: 530 FEEGNTFFKSKRYAEAIIAYEKCMAHIETIENSARVPESAIPDEMLKSLQPLREAALLNM 589

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           A  +    KY+ A       I +   +      YY    ++    RD+   Q   +L L+
Sbjct: 590 AACKLQVKKYKDAIDHTTMVIERGTSNPK---AYYRRAQAHLLRGRDLELAQADIELALE 646


>gi|154341943|ref|XP_001566923.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134064248|emb|CAM40447.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 849

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 66/238 (27%), Gaps = 52/238 (21%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
             +  +   Y++ +   +      A   + +     P      K+L   AF +     Y 
Sbjct: 406 PPLLDEHYFYQRGLQHRQSGELEAAVAMYTKALEISPTHF---KALFNRAFCEDKLKNYA 462

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSY--------------------------AQMI 145
           +A       +   P +      YY +G+SY                              
Sbjct: 463 RAIDDYTAALELDPRNPFT---YYNLGISYDHTGSHARAVQAFTRAIELDDHHPDFFHNR 519

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY------ 199
             +   Q A    +   +  +    N      + +       +L   +  +  Y      
Sbjct: 520 GFMQRKQGAYTAAIADYTAAIFLDPNH---FKSHYNRAYCFAKLGYYDEAVADYTAALKI 576

Query: 200 -------YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA----YVALALMDEA 246
                  Y  RG  +A + + +  + +++ A   +  +A  + A    Y  L   D A
Sbjct: 577 DSDNSNVYHNRGAALAKLGKLRAAVEDFNRALKRDPKLAFSLNARGLVYDQLQQYDRA 634


>gi|119946441|ref|YP_944121.1| TPR repeat-containing protein [Psychromonas ingrahamii 37]
 gi|119865045|gb|ABM04522.1| protein containing tetratricopeptide (TPR) repeat [Psychromonas
           ingrahamii 37]
          Length = 657

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/123 (13%), Positives = 42/123 (34%), Gaps = 13/123 (10%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQR--EVY----EKAVLFLKEQN 72
            Y   L +   +A   +     ++++     +  +  Y +  E+Y    EK     K + 
Sbjct: 332 FYTLLLALTLPVATPEVQASIWKNNQQNAFQAYQNQDYAQARELYDSPLEKGSALYKNKQ 391

Query: 73  FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE----SK 128
           + +A   F Q + + P +     +               +A +  ++ +   P      +
Sbjct: 392 YQQALTKFTQATINRPESA---AAFYNQGNAYAQLHNADKAIAAYQQSLKLNPTLKEAQE 448

Query: 129 NVD 131
           N+D
Sbjct: 449 NID 451


>gi|45358448|ref|NP_988005.1| ATP/GTP-binding motif-containing protein [Methanococcus maripaludis
           S2]
 gi|44921206|emb|CAF30441.1| TPR repeat:ATP/GTP-binding site motif A (P-loop) [Methanococcus
           maripaludis S2]
          Length = 388

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 70/206 (33%), Gaps = 38/206 (18%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S+   +  +++ E    +     + K+ EYFN+     P       +        +  GK
Sbjct: 5   SIFKSKDPKKLLETGTEYYNSGKYQKSIEYFNKTLNSEPKNP---DAWYFKGNAYHMLGK 61

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            + A    E+ ++  P    +     +   SY  ++             L+     VE  
Sbjct: 62  SKLAQDSYEKALSIRPNDLEI-----IK--SYTMLLN-----------SLELFKESVEIL 103

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
                V  +   +             +G  YLK G++  AI ++  +L         +E 
Sbjct: 104 ---KNVSESDDKIIEI----------LGDAYLKTGKFNEAILQYNNILERKPR---YKEI 147

Query: 230 MARLVEAYVALALMDEARE-VVSLIQ 254
           +A+   A V L   DEA E    +++
Sbjct: 148 LAKKGTALVGLKKFDEALEIYEKVLK 173


>gi|313672201|ref|YP_004050312.1| tetratricopeptide tpr_1 repeat-containing protein [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312938957|gb|ADR18149.1| Tetratricopeptide TPR_1 repeat-containing protein [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 529

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 60/190 (31%), Gaps = 41/190 (21%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGK 109
           D       Y   V+   +++F  A +Y+ +         F           A+       
Sbjct: 294 DKNDPLSYYYLGVISEIKKDFQGAVKYYKELTLMDPRHTFGKK------RLAYAYIKIKD 347

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y +A +  E       + ++VDY + +  + YA+         + T+  L  +   + + 
Sbjct: 348 YSKALTALESIDK---DERDVDY-FRIKALIYAEK--------KDTQNQLATLLDGLSKN 395

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
            NS              + L     +I  YY K  +Y       + +L+   +      A
Sbjct: 396 PNSE-------------DLL----FDIADYYEKVKQYDKVEYYLKKLLSINPNNAS---A 435

Query: 230 MARLVEAYVA 239
           +  L   Y  
Sbjct: 436 LNYLGYLYAE 445


>gi|258591099|emb|CBE67394.1| protein of unknown function [NC10 bacterium 'Dutch sediment']
          Length = 251

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 20/161 (12%), Positives = 48/161 (29%), Gaps = 35/161 (21%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKA 76
           +L  ++  +   + V  + G     SR       T  +     + E+ +     + + +A
Sbjct: 6   KLPSWSQILLAGVLVALVGGAFWLKSRPTMPIGATAGLESVSSILEQGIQAHNARQYEQA 65

Query: 77  YEYFNQCSRDFPFAG---------VARKSL----------------------LMSAFVQY 105
            E++++     P               +                        +      Y
Sbjct: 66  VEWYHRVLAQDPGHPVAHYNLGQIYTVQGQPAKAQWEYEAVLRADPRHLDAWINLGVALY 125

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
              K+Q+AA    + +T  P         + +G++  +M R
Sbjct: 126 RQRKFQEAAEASRQALTLSPRHP---MALFNLGVTLLEMDR 163


>gi|224002849|ref|XP_002291096.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220972872|gb|EED91203.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 620

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 69/214 (32%), Gaps = 24/214 (11%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV---YEKAVLFLKEQNFSK 75
           +      +   +A    +     SS      S T   Y+ ++    ++    L   +   
Sbjct: 1   MTILTRRLPSILASIAFILSTTTSSTSSVTASTTYSEYEEKINHHLQEGNNALATGDLPL 60

Query: 76  AYEYFNQCSRDFPFAGV------ARKSLLM--SAFVQ-YSAGKYQQAASLGEEYITQYPE 126
           A E++  C +  P          +    L   SA        + ++A SL  + +T +P+
Sbjct: 61  AAEHYESCLKLDPNQRYCLINYASTLVDLNESSADANETKEQRLEKAISLLRQVMTLHPK 120

Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY-TNSPYVKGARFYVTVG 185
             +  +       + A +++D    +  TK         VE           A   +   
Sbjct: 121 DGDAAF-------NLALLLQDSSRSEDFTKQAANLYQIAVEASIAEGEERWDAWANMAAA 173

Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
           + +L       G +  +RG Y  +I   + ++  
Sbjct: 174 KQELGQ---FTGPFGARRG-YERSIVFLEQMVEE 203


>gi|192360793|ref|YP_001981533.1| putative 34 kDa outer membrane protein [Cellvibrio japonicus
           Ueda107]
 gi|190686958|gb|ACE84636.1| putative 34 kDa outer membrane protein [Cellvibrio japonicus
           Ueda107]
          Length = 251

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 24/58 (41%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            Y    + + +Q++ +A  +F+     FP +     + L    V +  G   QA +L 
Sbjct: 172 YYWLGKISMLKQDYPQAKTWFSDLISRFPDSSKVAGAQLDLGRVFFFMGDTAQAKALL 229


>gi|42527620|ref|NP_972718.1| hypothetical protein TDE2117 [Treponema denticola ATCC 35405]
 gi|41818448|gb|AAS12637.1| conserved hypothetical protein [Treponema denticola ATCC 35405]
          Length = 429

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 6/39 (15%), Positives = 18/39 (46%), Gaps = 3/39 (7%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDF 87
             +   +++Y +A+     +N+ KA E + +     + +
Sbjct: 364 EKLSTVKKLYVQALKEYNNKNYEKAIELWKEILTIDKRY 402


>gi|255732832|ref|XP_002551339.1| predicted protein [Candida tropicalis MYA-3404]
 gi|240131080|gb|EER30641.1| predicted protein [Candida tropicalis MYA-3404]
          Length = 325

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 57/176 (32%), Gaps = 42/176 (23%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
            +  +A   ++   R  P      ++L+  A    S  ++ +AA L E+ +  +PE+   
Sbjct: 146 GDIERALSSYDAALRHAPNNP---EALIKLANTYRSKDQFLKAAELYEQALNFHPENGET 202

Query: 131 ----------------DYVYYLVGMSYAQMIR--------DVPYDQ-RATKLMLQYMSRI 165
                            Y  Y   + Y +            + YD+  + +   +   R+
Sbjct: 203 WGLLGHCYLMLDDLQRAYAAYQRALFYLENPNIPKLWHGIGILYDRYGSLEYAEEAFVRV 262

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
           ++   N        F + +               Y  +G+   A+  FQ +L N  
Sbjct: 263 LDLDPNFDKANEIYFRLGII--------------YKHQGKLQPALECFQYILNNPP 304


>gi|240143897|ref|ZP_04742498.1| putative tetratricopeptide repeat-containing domain protein
           [Roseburia intestinalis L1-82]
 gi|257204089|gb|EEV02374.1| putative tetratricopeptide repeat-containing domain protein
           [Roseburia intestinalis L1-82]
          Length = 392

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 73/252 (28%), Gaps = 59/252 (23%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           + + +A   L         +  L+   D R      +  +  ++  ++  A   FN    
Sbjct: 6   LPYMVAGAVLFAALFTGCTNERLEDELDFR------KIGINSMQSGDYEGAVAAFNSALS 59

Query: 86  DFPFAGVARKSLLMSAF----VQYSAGKYQQAASLGEEYITQYPESKNVDY------VYY 135
                     + L   +     QY+ G  + A +  +  I         DY       YY
Sbjct: 60  QCVGKI--TDTELDICYYKAAAQYAGGDIEGALATYQAMI---------DYDEENGNAYY 108

Query: 136 LVG-MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN------SPYVKGARFYVTVGRNQ 188
           L G +S  Q   D            +  +  V+   +        Y   A   +T    +
Sbjct: 109 LHGCLSLKQQDTDT---------AKKDFANAVKYNPDDYELYVGIYENLAGNNMTEEGEE 159

Query: 189 LAAKEVEI-----------GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
              K  +I           GR Y   G+Y  A+   +  +        + +A   L + Y
Sbjct: 160 YLNKAFDIKGNSAENLTWRGRIYYLLGQYDNAVKELEGAVKK-----DSAKANLYLAQVY 214

Query: 238 VALALMDEAREV 249
            A      A + 
Sbjct: 215 EAEEDSANAEKY 226


>gi|166368546|ref|YP_001660819.1| tetratricopeptide TPR_2 [Microcystis aeruginosa NIES-843]
 gi|166090919|dbj|BAG05627.1| tetratricopeptide TPR_2 [Microcystis aeruginosa NIES-843]
          Length = 741

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 55/177 (31%), Gaps = 32/177 (18%)

Query: 61  YEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y + V       F +A   ++              ++        Y+ G+ ++A +  + 
Sbjct: 516 YNRGVALGNLGRFEEAIASYDRALEIK----PDKHEAWYNRGVALYNLGRLEEAIASYDR 571

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +   P+  +    +   G++   + R         +  +    R +E   + P    A 
Sbjct: 572 ALEFKPDDPD---AWNNRGVALGNLGR--------FEQAIASYDRALEFKPDDP---DAW 617

Query: 180 FYVTVGRNQLAAKEVEIGRY-------------YLKRGEYVAAIPRFQLVLANYSDA 223
           +      + L   E  I  Y             +  RG  +  + R +  +A+Y  A
Sbjct: 618 YNRGNALDDLGRLEEAIASYDRALEFKPDYHQAWYNRGNALDDLGRLEEAIASYDQA 674



 Score = 36.2 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 46/141 (32%), Gaps = 21/141 (14%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y + V       F +A   +++     P    A           Y+ G+++QA +  +  
Sbjct: 74  YNRGVALGNLGRFEQAIASYDRALEIKPDDPDAWN---NRGNALYNLGRFEQAIASYDRA 130

Query: 121 ITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           +   P     DY   +Y  G++   + R         +  +    R +E   + P    A
Sbjct: 131 LEIKP-----DYHEAWYNRGVALGNLGR--------FEQAIASYDRALEFKPDDP---DA 174

Query: 179 RFYVTVGRNQLAAKEVEIGRY 199
            +   V    L   E  I  Y
Sbjct: 175 WYNRGVALGNLGRFEQAIASY 195



 Score = 35.5 bits (81), Expect = 7.5,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 61/204 (29%), Gaps = 36/204 (17%)

Query: 61  YEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y + V       F +A   ++              ++         + G+ ++A +  + 
Sbjct: 448 YNRGVALGNLGRFEEAIASYDRALEIK----PDKHEAWYNRGVALGNLGRLEEAIASYDR 503

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +   P+  +    +Y  G++   + R         +  +    R +E   +        
Sbjct: 504 ALEFKPDDPD---AWYNRGVALGNLGR--------FEEAIASYDRALEIKPDKHEAW--Y 550

Query: 180 FYVTVGRNQLAAKEVEIGRY-------------YLKRGEYVAAIPRFQLVLANYSDA--- 223
                  N L   E  I  Y             +  RG  +  + RF+  +A+Y  A   
Sbjct: 551 NRGVALYN-LGRLEEAIASYDRALEFKPDDPDAWNNRGVALGNLGRFEQAIASYDRALEF 609

Query: 224 -EHAEEAMARLVEAYVALALMDEA 246
                +A      A   L  ++EA
Sbjct: 610 KPDDPDAWYNRGNALDDLGRLEEA 633


>gi|162449100|ref|YP_001611467.1| hypothetical protein sce0830 [Sorangium cellulosum 'So ce 56']
 gi|161159682|emb|CAN90987.1| hypothetical protein predicted by Glimmer/Critica [Sorangium
           cellulosum 'So ce 56']
          Length = 390

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 31/82 (37%), Gaps = 1/82 (1%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
           V +   +D     E +E+A   L      +A   F + +R  P   VA  SL  +     
Sbjct: 48  VVVSPYSDAELAAE-FERARALLLADRAREAAPLFERLARLAPGGEVAPPSLFNAGLAHE 106

Query: 106 SAGKYQQAASLGEEYITQYPES 127
           + G    AA    E   ++P+ 
Sbjct: 107 ALGDRALAAERYREVAQRFPDH 128


>gi|114799586|ref|YP_760538.1| putative lipoprotein [Hyphomonas neptunium ATCC 15444]
 gi|114739760|gb|ABI77885.1| putative lipoprotein [Hyphomonas neptunium ATCC 15444]
          Length = 213

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 39/116 (33%), Gaps = 28/116 (24%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFS--KAYEYFNQCSRDFPFAGVARKSLLMSA----- 101
             +        +YE  VL +    ++   A  YF++    +P    AR++          
Sbjct: 68  PELAPEEKAHVLYEMGVLSMSPTGYNLPGAVGYFDEVIATYPGTEWARRAEAKLPEARAQ 127

Query: 102 -------------------FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                              +   + G+++ A  L  +Y +  P++ +V    Y +G
Sbjct: 128 VGALNIVLESPDSTNTERFYALMNLGRHEDAIDLMTQY-SIEPDN-DVKLAMYQIG 181


>gi|16760172|ref|NP_455789.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|16765052|ref|NP_460667.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|29142057|ref|NP_805399.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56413366|ref|YP_150441.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|161613809|ref|YP_001587774.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167549790|ref|ZP_02343548.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|168230140|ref|ZP_02655198.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|194446469|ref|YP_002040959.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194469605|ref|ZP_03075589.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194737248|ref|YP_002114737.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197247715|ref|YP_002146321.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197265165|ref|ZP_03165239.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|198242977|ref|YP_002215435.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|200390499|ref|ZP_03217110.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204927717|ref|ZP_03218918.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|213052586|ref|ZP_03345464.1| hypothetical protein Salmoneentericaenterica_06516 [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|213416473|ref|ZP_03349617.1| hypothetical protein Salmonentericaenterica_00137 [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
 gi|213424422|ref|ZP_03357235.1| hypothetical protein SentesTyphi_01405 [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213582489|ref|ZP_03364315.1| hypothetical protein SentesTyph_15343 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213647983|ref|ZP_03378036.1| hypothetical protein SentesTy_12279 [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213855514|ref|ZP_03383754.1| hypothetical protein SentesT_16285 [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|224583802|ref|YP_002637600.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|238911902|ref|ZP_04655739.1| hypothetical protein SentesTe_12321 [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|289825191|ref|ZP_06544499.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|25324989|pir||AD0655 conserved hypothetical protein STY1343 [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16420238|gb|AAL20626.1| putative N-acetylglucosaminyl transferase [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|16502466|emb|CAD08423.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29137686|gb|AAO69248.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56127623|gb|AAV77129.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|161363173|gb|ABX66941.1| hypothetical protein SPAB_01543 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194405132|gb|ACF65354.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194455969|gb|EDX44808.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194712750|gb|ACF91971.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197211418|gb|ACH48815.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197243420|gb|EDY26040.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197937493|gb|ACH74826.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|199602944|gb|EDZ01490.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204323059|gb|EDZ08255.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205324977|gb|EDZ12816.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205335504|gb|EDZ22268.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|224468329|gb|ACN46159.1| hypothetical protein SPC_2023 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|267993649|gb|ACY88534.1| hypothetical protein STM14_2066 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|312912699|dbj|BAJ36673.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|320085795|emb|CBY95571.1| Uncharacterized protein HI1223 Flags: Precursor [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           2007-60-3289-1]
 gi|321224336|gb|EFX49399.1| Heat shock predicted periplasmic protein YciM, precursor
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. TN061786]
 gi|322614966|gb|EFY11891.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322621440|gb|EFY18294.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322623218|gb|EFY20060.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322628508|gb|EFY25296.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322633672|gb|EFY30412.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322638520|gb|EFY35215.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322640810|gb|EFY37459.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322645326|gb|EFY41854.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322651791|gb|EFY48163.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322654312|gb|EFY50634.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322659278|gb|EFY55526.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322662721|gb|EFY58928.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322667668|gb|EFY63828.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322671918|gb|EFY68039.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322677036|gb|EFY73100.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322680302|gb|EFY76341.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322685269|gb|EFY81265.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323129978|gb|ADX17408.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|323196181|gb|EFZ81340.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323199328|gb|EFZ84422.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323204786|gb|EFZ89782.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323205918|gb|EFZ90881.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323212719|gb|EFZ97534.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323217245|gb|EGA01966.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323222890|gb|EGA07243.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323225572|gb|EGA09800.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323232107|gb|EGA16214.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323234634|gb|EGA18721.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323238086|gb|EGA22145.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323243311|gb|EGA27330.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323248433|gb|EGA32368.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323252539|gb|EGA36382.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323255436|gb|EGA39202.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323260838|gb|EGA44440.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323267575|gb|EGA51058.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323270995|gb|EGA54426.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|326623182|gb|EGE29527.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
 gi|332988596|gb|AEF07579.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 389

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 2/62 (3%)

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           A   + +GR Y+ RG+Y  A+   Q V+    D E   E +  L   Y  L    E  E 
Sbjct: 214 ARVSIMMGRVYMARGDYAKAVESLQRVIV--QDKELVSETLEMLQTCYQQLGKNAEWAEF 271

Query: 250 VS 251
           + 
Sbjct: 272 LR 273


>gi|325499002|gb|EGC96861.1| hypothetical protein ECD227_3099 [Escherichia fergusonii ECD227]
          Length = 248

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/155 (11%), Positives = 47/155 (30%), Gaps = 23/155 (14%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS--LLMSAFVQYS 106
           + +      +  Y  A    +   + +A  ++ Q          A ++  +L  A  Q++
Sbjct: 78  EELAIAETNQNHYALANELARLGRYHEAVPHYQQALS----GIFAHEAVMMLSLAQAQFA 133

Query: 107 AGKYQQAASLGEEYITQYPESKNVD-YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
             ++       E+ +   P+ ++ D ++ +   ++           Q            +
Sbjct: 134 IQEFTACQQTLEDVMRYNPDFQSADGHLLFARALA----------AQEKYADAESEFEVL 183

Query: 166 VERYTNSP---YVKGARFYVTVGRNQLAAKEVEIG 197
           V  Y       Y       ++  R    A E  + 
Sbjct: 184 VSYYPGPQARIYYAEMLAKMSRLRE---ANEQYVA 215


>gi|291567441|dbj|BAI89713.1| TPR domain protein [Arthrospira platensis NIES-39]
          Length = 715

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 46/131 (35%), Gaps = 28/131 (21%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           +D         E  E A     +  F++A   + +    +P            A + Y+ 
Sbjct: 138 IDIEPQNIKLTEYIEVAQTLDNQGKFTQAIALYTKAMEIYP----------NVAEIHYNL 187

Query: 108 GK-------YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           G+       ++ A +  ++ +   P   ++ YVY  +G        DV  +Q+  +  + 
Sbjct: 188 GETFVNCQQWKSAITAYKQALEMNP---DLYYVYSRLG--------DVFTEQQNYQEAIA 236

Query: 161 YMSRIVERYTN 171
              + V+   +
Sbjct: 237 AYQQCVKLKPD 247


>gi|254505221|ref|ZP_05117372.1| peptidase, M48 family [Labrenzia alexandrii DFL-11]
 gi|222441292|gb|EEE47971.1| peptidase, M48 family [Labrenzia alexandrii DFL-11]
          Length = 494

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 65/193 (33%), Gaps = 28/193 (14%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
           A   L  +    S  +      D     + Y +A+  ++ +    A    ++  R  P  
Sbjct: 292 AKAKLFAFTSHPSATLRAYPRKDKSLPAQ-YARAIAAMQSRG-KGAVGEIDKLIRQHPTN 349

Query: 91  GV----ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
                   ++LL         G  + A +     ++  P         ++V + YA +  
Sbjct: 350 PYFHELKGQALLE-------GGDPKNAIAPFRRALSIRPNET-----QFMVWLGYALVAS 397

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNS--PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
           D   +          + R ++R +NS   Y + A  +   G    A  ++   +  + RG
Sbjct: 398 D---NPANLAEAESVLKRAIQRDSNSGTAYAQLAIAHGRQGER--AEADLATAKGLMVRG 452

Query: 205 EYVAA---IPRFQ 214
           E+ AA     R Q
Sbjct: 453 EFEAAKRYAARAQ 465


>gi|153954567|ref|YP_001395332.1| hypothetical protein CKL_1949 [Clostridium kluyveri DSM 555]
 gi|146347425|gb|EDK33961.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
          Length = 278

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 59/140 (42%), Gaps = 22/140 (15%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKS 96
           +++ +DV  DS+ D+ +   +Y +     K+++ ++     N   + S  +  +  A   
Sbjct: 141 KENGKDVLTDSMNDLAW---MYIEGKG--KDKDLNQGATILNEAIKISPSYNESYYA--- 192

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
               A+V     +Y ++ S   +YI     ++     Y ++G+ Y           +  +
Sbjct: 193 ---LAYVYSHLERYDESISAANKYIENTKSNEEKSNAYNILGLDYEGN--------KDYE 241

Query: 157 LMLQYMSRIVERYTNSPYVK 176
              +Y ++ ++  +N+ Y K
Sbjct: 242 NAKKYFNQAIQLDSNNQYAK 261


>gi|2896142|gb|AAC03120.1| Tpr1 [Schizosaccharomyces pombe]
          Length = 1039

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 57/188 (30%), Gaps = 27/188 (14%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           KA +   + N+  A+  + +     P         +      ++      A S       
Sbjct: 181 KARILYAKGNYRSAFRLYQRALVSNP--QFKPDPRIGIGLCFWNLDMKTDALSAWTRVQQ 238

Query: 123 QYPESKNVD-YVYYLVGMSYAQM-IRDVPYDQ--RATKLMLQYMSRIVERYTNSPYVKGA 178
             P++  VD Y    +G+ Y  +  ++V  D   +     LQ++ R  +   N P     
Sbjct: 239 LDPKNTVVDTY----IGLYYYDLAFQNVNNDSFVQNYGKALQHIQRAFKTRNNDPVASSI 294

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
                               Y   +  Y   I   + V+ N   +    +    +  AY 
Sbjct: 295 LER-----------------YVYSKKNYEGCIKLAENVIQNSFSSSLIADGYYWMGRAYH 337

Query: 239 ALALMDEA 246
            +   ++A
Sbjct: 338 QMGNNEKA 345


>gi|88803288|ref|ZP_01118814.1| hypothetical protein PI23P_11887 [Polaribacter irgensii 23-P]
 gi|88780854|gb|EAR12033.1| hypothetical protein PI23P_11887 [Polaribacter irgensii 23-P]
          Length = 255

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 19/45 (42%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
           D      +Y+  +  ++ + F KA   F +   ++P +  A+   
Sbjct: 200 DFTAPLFLYKAGMTAMQLEEFDKAATLFTKIKENYPTSTEAKDVE 244



 Score = 36.2 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 37/125 (29%), Gaps = 10/125 (8%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y   V +L+ + + KA EY      +     +   +L           + +QA    E+ 
Sbjct: 136 YYAGVSYLEMKQYDKAIEYLENFDSEDEM--LGPVALGAVGDAFADINQAEQALEYYEKA 193

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
             +           Y  GM+  Q+                  ++I E Y  S   K    
Sbjct: 194 AKKKNNDFTAPLFLYKAGMTAMQL--------EEFDKAATLFTKIKENYPTSTEAKDVEK 245

Query: 181 YVTVG 185
           ++   
Sbjct: 246 FINAA 250


>gi|157384228|gb|ABV49465.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 40 [Homo sapiens]
          Length = 1337

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|157384186|gb|ABV49444.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 243 [Homo sapiens]
          Length = 1266

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|157384170|gb|ABV49436.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 62 [Homo sapiens]
          Length = 1367

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTXYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|157384152|gb|ABV49427.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 28 [Homo sapiens]
          Length = 1125

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|157384136|gb|ABV49419.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 45 [Homo sapiens]
          Length = 1215

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|157384132|gb|ABV49417.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 32 [Homo sapiens]
          Length = 1024

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|151946811|gb|ABS19052.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 189 [Homo sapiens]
          Length = 1137

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|151946813|gb|ABS19053.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 213 [Homo sapiens]
          Length = 1182

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|151946755|gb|ABS19024.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 188 [Homo sapiens]
          Length = 1137

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|151946739|gb|ABS19016.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 269 [Homo sapiens]
          Length = 1140

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSXAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|151946797|gb|ABS19045.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 203 [Homo sapiens]
          Length = 792

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|148733146|gb|ABR09231.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 52 [Homo sapiens]
          Length = 1331

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|148733174|gb|ABR09245.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 61 [Homo sapiens]
          Length = 1293

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|148733164|gb|ABR09240.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 18 [Homo sapiens]
          Length = 1063

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|148733214|gb|ABR09265.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 33 [Homo sapiens]
          Length = 1116

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|148733194|gb|ABR09255.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 25 [Homo sapiens]
          Length = 1140

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|148733184|gb|ABR09250.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 60 [Homo sapiens]
          Length = 1320

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|148733144|gb|ABR09230.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 46 [Homo sapiens]
          Length = 1223

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|148733150|gb|ABR09233.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 13 [Homo sapiens]
          Length = 1016

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|148733210|gb|ABR09263.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 43 [Homo sapiens]
          Length = 1256

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|148733140|gb|ABR09228.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 58 [Homo sapiens]
          Length = 1263

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|148733202|gb|ABR09259.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 70 [Homo sapiens]
          Length = 1290

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|148733198|gb|ABR09257.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 21 [Homo sapiens]
          Length = 1124

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|148733170|gb|ABR09243.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 22 [Homo sapiens]
          Length = 1176

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|148733152|gb|ABR09234.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 59 [Homo sapiens]
          Length = 1444

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWXNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|148733208|gb|ABR09262.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 42 [Homo sapiens]
          Length = 1270

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|148733136|gb|ABR09226.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 57 [Homo sapiens]
          Length = 1268

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|148733196|gb|ABR09256.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 207 [Homo sapiens]
          Length = 1030

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|148733138|gb|ABR09227.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 35 [Homo sapiens]
          Length = 1207

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|148733154|gb|ABR09235.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 48 [Homo sapiens]
          Length = 1218

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPXTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|148733204|gb|ABR09260.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 44 [Homo sapiens]
          Length = 1132

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|148733186|gb|ABR09251.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 41 [Homo sapiens]
          Length = 1315

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|148733160|gb|ABR09238.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 37 [Homo sapiens]
          Length = 1224

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|148733168|gb|ABR09242.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 4 [Homo sapiens]
          Length = 955

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|148733190|gb|ABR09253.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 30 [Homo sapiens]
          Length = 1095

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|148733192|gb|ABR09254.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 19 [Homo sapiens]
          Length = 939

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|148733206|gb|ABR09261.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 54 [Homo sapiens]
          Length = 1376

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|148733142|gb|ABR09229.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 63 [Homo sapiens]
          Length = 1335

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|148733162|gb|ABR09239.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 65 [Homo sapiens]
          Length = 1399

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCXPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|295881352|gb|ABC87286.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 16 [Homo sapiens]
          Length = 1062

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|75706636|gb|ABA25869.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 67 [Homo sapiens]
          Length = 1363

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|62860933|gb|AAY16586.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 14 [Homo sapiens]
          Length = 975

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|59799376|gb|AAX07237.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 5 [Homo sapiens]
          Length = 1008

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|52839882|gb|AAU87837.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 11 [Homo sapiens]
          Length = 1046

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|299140211|ref|ZP_07033378.1| transglutaminase domain protein [Acidobacterium sp. MP5ACTX8]
 gi|298597849|gb|EFI54020.1| transglutaminase domain protein [Acidobacterium sp. MP5ACTX8]
          Length = 1065

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 16/121 (13%), Positives = 43/121 (35%), Gaps = 24/121 (19%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL-----MSAFVQYSAGK 109
               ++  +A    + Q++ +A+E  +      P      ++ L       A   Y  GK
Sbjct: 652 DEAAKLIHEAFQLEQSQSWEQAHEKLDAARALNP-----NQAYLWSNYGDLA-AHY--GK 703

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
             +A +     I  +P  ++V Y          +++      +  T    + +  +++++
Sbjct: 704 ANEAIADYNREIGDHPT-EDVPY----------RLLAATQLARHNTADAARTLHLLLQQH 752

Query: 170 T 170
            
Sbjct: 753 P 753


>gi|256376883|ref|YP_003100543.1| hypothetical protein Amir_2764 [Actinosynnema mirum DSM 43827]
 gi|255921186|gb|ACU36697.1| TPR repeat-containing protein [Actinosynnema mirum DSM 43827]
          Length = 683

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/125 (13%), Positives = 35/125 (28%), Gaps = 23/125 (18%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           +A          +A       +   P      A ++ L      Y +G+  QA +  +E 
Sbjct: 576 QATALADAGAPDQARTLIESLTTTHPTCAQAWAIRARLE-----YESGELPQALADFDES 630

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +       +   V Y   +   +   D            Q    ++ R  +    + AR 
Sbjct: 631 VRL----LDAPEVRYNRALV-LEETGDYTR-------AAQDYREVLARTED----EDARD 674

Query: 181 YVTVG 185
            +   
Sbjct: 675 RLAHC 679


>gi|227937277|gb|ACP43285.1| ubiquitously transcribed tetratricopeptide repeat Y-linked isoform
           3 [Gorilla gorilla]
          Length = 1063

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSSAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|227937276|gb|ACP43284.1| ubiquitously transcribed tetratricopeptide repeat Y-linked isoform
           2 [Gorilla gorilla]
          Length = 1240

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSSAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|227937275|gb|ACP43283.1| ubiquitously transcribed tetratricopeptide repeat Y-linked isoform
           1 [Gorilla gorilla]
          Length = 1347

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSSAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|219855061|ref|YP_002472183.1| hypothetical protein CKR_1718 [Clostridium kluyveri NBRC 12016]
 gi|219568785|dbj|BAH06769.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 279

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 59/140 (42%), Gaps = 22/140 (15%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKS 96
           +++ +DV  DS+ D+ +   +Y +     K+++ ++     N   + S  +  +  A   
Sbjct: 142 KENGKDVLTDSMNDLAW---MYIEGKG--KDKDLNQGATILNEAIKISPSYNESYYA--- 193

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
               A+V     +Y ++ S   +YI     ++     Y ++G+ Y           +  +
Sbjct: 194 ---LAYVYSHLERYDESISAANKYIENTKSNEEKSNAYNILGLDYEGN--------KDYE 242

Query: 157 LMLQYMSRIVERYTNSPYVK 176
              +Y ++ ++  +N+ Y K
Sbjct: 243 NAKKYFNQAIQLDSNNQYAK 262


>gi|218441289|ref|YP_002379618.1| peptidase M48 Ste24p [Cyanothece sp. PCC 7424]
 gi|218174017|gb|ACK72750.1| peptidase M48 Ste24p [Cyanothece sp. PCC 7424]
          Length = 667

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 26/63 (41%), Gaps = 4/63 (6%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           + +  +  L EQ +S+A +   +      +F       +         Y+ G+ ++A +L
Sbjct: 2   LLKDGLKALSEQRYSEAVDLLEEYCQTPNNFNHPNYT-QGQKALIRAYYANGQTEKALAL 60

Query: 117 GEE 119
            +E
Sbjct: 61  CQE 63


>gi|168260077|ref|ZP_02682050.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|205350584|gb|EDZ37215.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
          Length = 389

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 2/62 (3%)

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           A   + +GR Y+ RG+Y  A+   Q V+    D E   E +  L   Y  L    E  E 
Sbjct: 214 ARVSIMMGRVYMARGDYAKAVESLQRVIV--QDKELVSETLEMLQTCYQQLGKNAEWAEF 271

Query: 250 VS 251
           + 
Sbjct: 272 LR 273


>gi|158259177|dbj|BAF85547.1| unnamed protein product [Homo sapiens]
          Length = 1079

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|33188431|ref|NP_009056.3| histone demethylase UTY isoform 3 [Homo sapiens]
 gi|226693569|sp|O14607|UTY_HUMAN RecName: Full=Histone demethylase UTY; AltName:
           Full=Ubiquitously-transcribed TPR protein on the Y
           chromosome; AltName: Full=Ubiquitously-transcribed Y
           chromosome tetratricopeptide repeat protein
 gi|119612019|gb|EAW91613.1| ubiquitously transcribed tetratricopeptide repeat gene, Y-linked
           [Homo sapiens]
          Length = 1347

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|33188427|ref|NP_872600.1| histone demethylase UTY isoform 2 [Homo sapiens]
          Length = 1240

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|2580576|gb|AAC51842.1| ubiquitous TPR motif, Y isoform [Homo sapiens]
          Length = 1240

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|71908057|ref|YP_285644.1| TPR repeat-containing protein [Dechloromonas aromatica RCB]
 gi|71847678|gb|AAZ47174.1| TPR repeat:Tetratricopeptide TPR_3:Tetratricopeptide TPR_4
           [Dechloromonas aromatica RCB]
          Length = 923

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 63/198 (31%), Gaps = 39/198 (19%)

Query: 66  LFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
              ++Q F +A    +   +  P      ++L + A   Y    +Q A S  ++ +    
Sbjct: 242 TLFQQQKFDEASTQLDALRKIAPKHP---QTLYLDAQASYQRKDFQGARSKLQDLLKFNT 298

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
            +        L G    Q+        R+      Y+++ + +             + + 
Sbjct: 299 NNPT---ALQLAGAVEFQL--------RSYMQAETYLNKALSQAPE----------LRLA 337

Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV-EAYVALALMD 244
           R  L      +   YL+ G+   A+   Q +L         + A+  L  E Y+      
Sbjct: 338 RRIL------VAT-YLRNGQAAKALNTLQPMLDK----ADTDSALLTLAGETYLQNGDAK 386

Query: 245 EAREV---VSLIQERYPQ 259
           +A E     S +    P 
Sbjct: 387 KAEEYFAKASKLDPNDPG 404


>gi|33188429|ref|NP_872601.1| histone demethylase UTY isoform 1 [Homo sapiens]
 gi|2580578|gb|AAC51843.1| ubiquitous TPR motif, Y isoform [Homo sapiens]
 gi|147897999|gb|AAI40392.1| Ubiquitously transcribed tetratricopeptide repeat gene, Y-linked
           [synthetic construct]
 gi|261857756|dbj|BAI45400.1| ubiquitously transcribed tetratricopeptide repeat gene, Y-linked
           [synthetic construct]
          Length = 1079

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|57113895|ref|NP_001009002.1| histone demethylase UTY [Pan troglodytes]
 gi|55976641|sp|Q6B4Z3|UTY_PANTR RecName: Full=Histone demethylase UTY; AltName: Full=Ubiquitously
           transcribed TPR protein on the Y chromosome; AltName:
           Full=Ubiquitously transcribed Y chromosome
           tetratricopeptide repeat protein
 gi|50844491|gb|AAT84369.1| UTY [Pan troglodytes]
          Length = 1079

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSSAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|2580574|gb|AAC51841.1| ubiquitous TPR motif, Y isoform [Homo sapiens]
          Length = 1347

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|84516650|ref|ZP_01004009.1| hypothetical protein SKA53_08561 [Loktanella vestfoldensis SKA53]
 gi|84509686|gb|EAQ06144.1| hypothetical protein SKA53_08561 [Loktanella vestfoldensis SKA53]
          Length = 273

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 9/59 (15%), Positives = 22/59 (37%), Gaps = 1/59 (1%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-KYQQAASLGEEY 120
           +A   L   +F  A +  +     +P + +A ++  +      + G     A +  E +
Sbjct: 156 RAQEALASGDFRGAVDQLSTFGTTYPGSPLAPEAAFIRGQALAALGEDTGAARAFLESF 214


>gi|313676765|ref|YP_004054761.1| hypothetical protein [Marivirga tractuosa DSM 4126]
 gi|312943463|gb|ADR22653.1| Tetratricopeptide TPR_1 repeat-containing protein [Marivirga
           tractuosa DSM 4126]
          Length = 469

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 24/196 (12%), Positives = 58/196 (29%), Gaps = 42/196 (21%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +++  + + +   + +A + +     +         ++   A+      + + + +  E+
Sbjct: 138 LFQMGMAYQQLGKYEEAIKNYKAVLEE---NIDHESAIYELAYCLDVTDQLEGSIAYYEK 194

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           +I   P S +    +Y +G+                         ++ +         A 
Sbjct: 195 FIDADPYSYH---AWYNLGV-------------------------VLHKLGKYEKAIEAY 226

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE----EAMARLVE 235
            Y        A+        Y   G   +A+ +    L  +S     E    E   R+ E
Sbjct: 227 EYAVAIDENFASA-------YFNMGNTYSALEKNNKSLDAFSQTLRIEGPSAEVFCRMAE 279

Query: 236 AYVALALMDEAREVVS 251
            Y  L   D A +   
Sbjct: 280 TYDKLDQADLAIKYFQ 295


>gi|295881339|gb|AAY16581.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 53 [Homo sapiens]
          Length = 1207

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 38/141 (26%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QL------------AAKEVEIGR 198
             ++    +    K     + +               QL            A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYXSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|86211237|gb|ABC87285.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 47 [Homo sapiens]
          Length = 1342

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 38/141 (26%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QL------------AAKEVEIGR 198
             ++    +    K     + +               QL            A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|290974562|ref|XP_002670014.1| predicted protein [Naegleria gruberi]
 gi|284083568|gb|EFC37270.1| predicted protein [Naegleria gruberi]
          Length = 327

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 39/108 (36%), Gaps = 10/108 (9%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVAR 94
           G    S +D+      +  +    Y +  LF  + N+S A + +++   + P  +     
Sbjct: 136 GVITNSYQDLQKAKEINPFHPEVFYRRGNLFYFDSNYSSAIKDYSKAIANHPDFYECYFN 195

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
           + L       Y   +  +     E Y+   P   N      L+G+SY 
Sbjct: 196 RGL-----CYYQLKRLDRCIKDLETYLKHVPNDPNT---LKLLGISYY 235


>gi|229505052|ref|ZP_04394562.1| GGDEF family protein [Vibrio cholerae BX 330286]
 gi|229518396|ref|ZP_04407840.1| GGDEF family protein [Vibrio cholerae RC9]
 gi|229608056|ref|YP_002878704.1| GGDEF family protein [Vibrio cholerae MJ-1236]
 gi|229345111|gb|EEO10085.1| GGDEF family protein [Vibrio cholerae RC9]
 gi|229357275|gb|EEO22192.1| GGDEF family protein [Vibrio cholerae BX 330286]
 gi|229370711|gb|ACQ61134.1| GGDEF family protein [Vibrio cholerae MJ-1236]
          Length = 640

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 72/212 (33%), Gaps = 32/212 (15%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQ-CSRDFPFAG--VARKSLLMS 100
           D+ L  + D      +Y    L +     +  A +Y N+            +  +     
Sbjct: 188 DLLLSLLPDYVDPSGIYNDVGLLMGTLGQYESALDYLNKALEYRLEQGNPLLIAQVEHSL 247

Query: 101 AFVQYSAGKYQQAASLGEEYITQY--PES--KNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
               +  G+Y+++    E+    +  P +    + YV+  +G +Y ++   V  DQ    
Sbjct: 248 GDTYFKQGRYEESILYFEQ-AKAHLTPANYLFGLAYVHLGLGKAYIELNNFVEGDQ-HLF 305

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             L+Y++          +       +      LA        +  K  +Y  AI      
Sbjct: 306 QALEYVN---------QHKDQHLQGLIYL--SLAQ-----AHF--KEQKYAQAIDYANQA 347

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           +A  S++           +AY+ LA + EA +
Sbjct: 348 VA-ISESASLPR---IKAQAYLQLAKIAEAEQ 375


>gi|153871493|ref|ZP_02000650.1| Tetratricopeptide TPR_2 [Beggiatoa sp. PS]
 gi|152072041|gb|EDN69350.1| Tetratricopeptide TPR_2 [Beggiatoa sp. PS]
          Length = 933

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 34/239 (14%), Positives = 67/239 (28%), Gaps = 47/239 (19%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFN-------QCSRDFPFAGVARKSLLMSAFV 103
               R   +++ +        ++  A E +        +    F       + L     V
Sbjct: 402 PPSYRAMIQLFIEGEKAYDIADYLVASEKWQAGLKRAHKLEHKF----YTSQFLHHLGLV 457

Query: 104 QYSAGKYQQAA-------------SLGEEYITQYPESKNVDYVY-----YLVGMSYAQMI 145
                +Y +A              +  + +      S  +  VY     Y   + Y Q  
Sbjct: 458 YKQLEQYPKAIEYFDSALTISRNIADLQRFGA---GSSAIGEVYQDLEQYSKALRYYQQA 514

Query: 146 RDVPYDQRATKLMLQYMSRIVERY---TNSPYVKGARFY---VTVGRNQLAAKE----VE 195
             +  D     L    ++ +   Y                  +   +N+   KE      
Sbjct: 515 VVIFRDIGNKFLEGHCLTNMGTTYFELGQHEKALEHSQQALIINRIKNR--QKEGTNLYN 572

Query: 196 IGRYYLKRGEYVAAIPRFQLVL---ANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
           IGR Y  R +Y  A+  +Q  L     ++D       +  +  AY+ L    +A   + 
Sbjct: 573 IGRIYAHRSQYSIALNYYQQALAINREFNDKYEEGSILNNIGIAYMELGQNQDALIYLK 631


>gi|145524609|ref|XP_001448132.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124415665|emb|CAK80735.1| unnamed protein product [Paramecium tetraurelia]
          Length = 879

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 62/195 (31%), Gaps = 50/195 (25%)

Query: 62  EKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
            +     K+++F KA E++         F     KS+    F       Y  A S   + 
Sbjct: 274 SQGFDARKKEDFIKAIEFYTMALM----FNPNHFKSIFNRGFAFDKLRMYNDAISDYTKA 329

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           I    +SKN  Y YY  G+SY +             L ++  ++ +E    S        
Sbjct: 330 IEM--DSKNA-YAYYNRGISYDKK--------GDYNLAIKDFAKSIELDP-SK------- 370

Query: 181 YVTVGRNQLAAKEVEIGRYY------LKRGEYV-AAIPRFQLVLANYSDAEHAEEAMARL 233
                             +Y      +K+   V  AI  F   +    D  H  +A    
Sbjct: 371 ----------------ADFYHNKGFAMKKKNLVREAILEFNECIRL--DKNHF-KAYYNR 411

Query: 234 VEAYVALALMDEARE 248
              Y  L   D+A++
Sbjct: 412 ANCYEKLGDFDKAQQ 426



 Score = 35.9 bits (82), Expect = 5.6,   Method: Composition-based stats.
 Identities = 11/111 (9%), Positives = 38/111 (34%), Gaps = 13/111 (11%)

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
           ++    ++L    +     G++ +A +   + I   P + +     Y  G+   ++    
Sbjct: 570 YSQENTRTLNNRGYCLAKLGQFDEAIADYTKAINLDPVNIH---AIYNRGICNERI---- 622

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
                  +  ++  + +++    +     A F      + +   ++ I  Y
Sbjct: 623 ----GEFRKAIEDFTSVIQL--QNDQGANAYFNRGCCYDNIGEMDLAIADY 667


>gi|332667474|ref|YP_004450262.1| tetratricopeptide domain-containing protein [Haliscomenobacter
           hydrossis DSM 1100]
 gi|332336288|gb|AEE53389.1| tetratricopeptide domain protein [Haliscomenobacter hydrossis DSM
           1100]
          Length = 233

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 49/166 (29%), Gaps = 24/166 (14%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
            F++A+   +    +    +  D           Y   V  L    +  A  Y       
Sbjct: 82  SFAVAMLTTLPGGFKGFPKIIEDFPGTPAANLANYYSGVCLLNLGKYEAAISYLK----- 136

Query: 87  FPFAGVARKSLLM-------SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
                 + K  +M                 + QA S  ++ +            +YL  +
Sbjct: 137 ----DFSAKGAIMPIMKNGALGDAYSELKDFAQAKSYYKKAVNVTKNDMLTP--FYLKRL 190

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           +   M+ ++  D  A +    Y   + + Y ++P  + A  Y+   
Sbjct: 191 A---MLAEMEKDYAAAR---DYYQELKDEYPSAPEGQDAEKYLIYL 230


>gi|328867286|gb|EGG15669.1| hypothetical protein DFA_10511 [Dictyostelium fasciculatum]
          Length = 1089

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 50/162 (30%), Gaps = 35/162 (21%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS---------------AFVQYSAG 108
           A + +      KA  + ++  R  P +   + + L                 AF ++S  
Sbjct: 338 AKVLMAAGQLEKAQAFIDKAKRSSPKSERVQNAQLELSHLVEVDKINKLMDNAFGEFSRN 397

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYY-LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           ++ QA     + I     S     V Y L  + +           +     ++  ++I+E
Sbjct: 398 EFPQAIETFNKCIEINSHSP----VLYELRALCHMAS--------KNNAAAIEDSNKILE 445

Query: 168 ---RYTNSPYVKGARFYVTVGRNQLAAKEVEIGR----YYLK 202
               +     V           N +A K   + +    +Y K
Sbjct: 446 IDHNWPRKETVLSGFMNKDGQINVMAKKRWFVLKSHFLFYFK 487


>gi|313246466|emb|CBY35372.1| unnamed protein product [Oikopleura dioica]
          Length = 406

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 51/145 (35%), Gaps = 18/145 (12%)

Query: 43  SRDVYLDSVTDVRYQREV--YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
           S+    + + D +Y   +  Y + +  L  Q   +  E F + S  F    +A  + L  
Sbjct: 257 SKSKGTERLKDQKYDLSIKHYNRVISLLDHQETKENNEKFEEISSKFKSLKLA--AFLNL 314

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           + V     +  +A S  ++ I   PE++     ++  G +               +  + 
Sbjct: 315 SLVYPKIAENYKAISAADDAIKIDPENEK---AFFRRGTARMAGND--------LEAAIS 363

Query: 161 YMSRIVERYTNSPYVKGARFYVTVG 185
              ++VE    +   K A   + + 
Sbjct: 364 DFKKVVEV---NKENKTAAKNMKIC 385


>gi|313228454|emb|CBY23605.1| unnamed protein product [Oikopleura dioica]
          Length = 406

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 51/145 (35%), Gaps = 18/145 (12%)

Query: 43  SRDVYLDSVTDVRYQREV--YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
           S+    + + D +Y   +  Y + +  L  Q   +  E F + S  F    +A  + L  
Sbjct: 257 SKSKGTERLKDQKYDLSIKHYNRVISLLDHQETKENNEKFEEISSKFKSLKLA--AFLNL 314

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           + V     +  +A S  ++ I   PE++     ++  G +               +  + 
Sbjct: 315 SLVYPKIAENYKAISAADDAIKIDPENEK---AFFRRGTARMAGND--------LEAAIS 363

Query: 161 YMSRIVERYTNSPYVKGARFYVTVG 185
              ++VE    +   K A   + + 
Sbjct: 364 DFKKVVEV---NKENKTAAKNMKIC 385


>gi|301772582|ref|XP_002921709.1| PREDICTED: peptidyl-prolyl cis-trans isomerase D-like [Ailuropoda
           melanoleuca]
          Length = 370

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 50/121 (41%), Gaps = 2/121 (1%)

Query: 1   MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQRE 59
           +  V G    I +A   +L   AL+   +I  C L   + Q + +  L+++  D    + 
Sbjct: 250 LRYVEGSKAVIEQADRLKLQPVALSCVLNIGACKLKMSDWQGAVNSCLEALEIDPSNTKA 309

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y KA  +   + + +A     +     P    A ++ L+    +  A K ++ A+  + 
Sbjct: 310 LYRKAQGWQGLKEYDQALADLKKAQEIAP-EDKAIQAELLKVKQKIKAQKDKEKAAYAKM 368

Query: 120 Y 120
           +
Sbjct: 369 F 369


>gi|239618021|ref|YP_002941343.1| putative transcriptional regulator, Crp/Fnr family [Kosmotoga
           olearia TBF 19.5.1]
 gi|197321139|gb|ACH68643.1| hypothetical protein KO_27 [Kosmotoga olearia TBF 19.5.1]
 gi|239506852|gb|ACR80339.1| putative transcriptional regulator, Crp/Fnr family [Kosmotoga
           olearia TBF 19.5.1]
          Length = 362

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 21/53 (39%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
              +  ++ +Y KAV  L++ ++  A  Y       F  + + R   +  A  
Sbjct: 133 PPLIIGEKPLYRKAVSLLRKGDYDGAIAYLESYLSQFANSPLERPVRMFLALA 185


>gi|157828188|ref|YP_001494430.1| hypothetical protein A1G_01780 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165932890|ref|YP_001649679.1| Tol system periplasmic protein [Rickettsia rickettsii str. Iowa]
 gi|157800669|gb|ABV75922.1| hypothetical protein A1G_01780 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165907977|gb|ABY72273.1| Tol system periplasmic component [Rickettsia rickettsii str. Iowa]
          Length = 245

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 18/46 (39%)

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
             A   Y   K  +A    + +I +YP S  +   Y+  G  + + 
Sbjct: 122 DLALAAYKDNKLTEAKDKFKNFIQKYPNSLLISNAYFWYGECFFKQ 167



 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 14/133 (10%), Positives = 45/133 (33%), Gaps = 12/133 (9%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ- 111
           D+   ++ Y+ A+   K+   ++A + F    + +P + +   +        +    Y  
Sbjct: 113 DIAPDKQAYDLALAAYKDNKLTEAKDKFKNFIQKYPNSLLISNAYFWYGECFFKQKDYNG 172

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            A +  + Y    P+          + +S  ++        + T+     +++  + +  
Sbjct: 173 AAVNYLKGYKEL-PKGAKSSDGLLKLALSLGEL--------KKTQEACNMLAKFDKEFPT 223

Query: 172 SPYVKGARFYVTV 184
           +     A   +  
Sbjct: 224 NRTA--ASKKMAE 234


>gi|124024536|ref|YP_001018843.1| hypothetical protein P9303_28481 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964822|gb|ABM79578.1| Hypothetical protein P9303_28481 [Prochlorococcus marinus str. MIT
           9303]
          Length = 462

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 21/152 (13%), Positives = 46/152 (30%), Gaps = 31/152 (20%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS-------A 107
           +     Y +     + +++  A   FN+     P    A           Y+       +
Sbjct: 247 QDAAAYYNRGNAKDELKDYQGAISDFNKAIEINP--QYAA--------AYYNRGIVKRES 296

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           G  Q+A +   + I   P+          + ++Y+     V  +   T+  +   +R +E
Sbjct: 297 GDTQEAIADFNKAIEINPQ----------LAIAYSNRGI-VKRESGDTQEAIADFNRAIE 345

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
                 Y         + +  L   +  I  Y
Sbjct: 346 INP--EYAAAYNNR-GIAKKNLGNYQEAIADY 374


>gi|26325222|dbj|BAC26365.1| unnamed protein product [Mus musculus]
          Length = 457

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 7/39 (17%), Positives = 19/39 (48%), Gaps = 1/39 (2%)

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVD-YVYYLVGM 139
           +  + A + ++A +    ++ + P+ +    Y+ Y  GM
Sbjct: 170 YAHFKANRLEKAVAAAYTFLQRNPKHELTAKYLNYYRGM 208


>gi|117923356|ref|YP_863973.1| tetratricopeptide TPR_4 [Magnetococcus sp. MC-1]
 gi|117607112|gb|ABK42567.1| Tetratricopeptide TPR_4 [Magnetococcus sp. MC-1]
          Length = 584

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 26/68 (38%), Gaps = 2/68 (2%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           KA   +     S+A E       D        + +LM A  Q + G++Q+A      ++ 
Sbjct: 116 KARAHMALGQQSQALEVLESLPTD--TIDHTPELVLMMAQAQLANGQFQEARGRFSRFLV 173

Query: 123 QYPESKNV 130
           + P   + 
Sbjct: 174 ENPGHPHA 181


>gi|281412222|ref|YP_003346301.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga naphthophila
           RKU-10]
 gi|281373325|gb|ADA66887.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga naphthophila
           RKU-10]
          Length = 272

 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 26/68 (38%), Gaps = 1/68 (1%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-KSLLMSAFVQYSAGKYQQ 112
           V    ++Y  A+    E ++ +A E F    R+ P          L      Y+ G Y++
Sbjct: 11  VSVANDLYSSALSAYLEGDYRRALELFENALREDPTIEERDSLVKLKMGICAYAIGDYEK 70

Query: 113 AASLGEEY 120
           A +    +
Sbjct: 71  ARAYLSNF 78


>gi|238597707|ref|XP_002394401.1| hypothetical protein MPER_05711 [Moniliophthora perniciosa FA553]
 gi|215463378|gb|EEB95331.1| hypothetical protein MPER_05711 [Moniliophthora perniciosa FA553]
          Length = 282

 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/137 (12%), Positives = 36/137 (26%), Gaps = 20/137 (14%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARK 95
              S+      S  D     E+  K    +  + + +A   +          P    + +
Sbjct: 24  ASSSAPRQTGPSPQDKAKAEELKAKGNSLMSSKKYDEAIAAYGEAIALDSTNPI-YYSNR 82

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +         S G +  A    E  +       N    Y+ +G +   +           
Sbjct: 83  AA-----AYSSKGDHLSAIGDAE--LAL-ASDPNFVKAYHRLGHAQYCLSD--------F 126

Query: 156 KLMLQYMSRIVERYTNS 172
           K       R ++   N+
Sbjct: 127 KAAADAFERGLKLDPNN 143


>gi|162454222|ref|YP_001616589.1| hypothetical protein sce5945 [Sorangium cellulosum 'So ce 56']
 gi|161164804|emb|CAN96109.1| 533aa long hypothetical protein [Sorangium cellulosum 'So ce 56']
          Length = 802

 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 26/68 (38%), Gaps = 1/68 (1%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA-RKSLLMSAFVQYSAGKYQ 111
           + R   +    A L +  +++ +A    NQ    +P    A   +L +     + + +Y 
Sbjct: 66  EQRTPAQRIADAQLLMGSRDYERAANVLNQVVEKYPDHPTAFPDALTLLGETYFRSKQYL 125

Query: 112 QAASLGEE 119
            A  + + 
Sbjct: 126 SARRVFQR 133



 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 17/51 (33%), Gaps = 1/51 (1%)

Query: 204 GEYVAAIPRFQLVLANYSDAE-HAEEAMARLVEAYVALALMDEAREVVSLI 253
            +Y  A      V+  Y D      +A+  L E Y        AR V   I
Sbjct: 84  RDYERAANVLNQVVEKYPDHPTAFPDALTLLGETYFRSKQYLSARRVFQRI 134


>gi|115378279|ref|ZP_01465447.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
 gi|310821098|ref|YP_003953456.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|115364721|gb|EAU63788.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
 gi|309394170|gb|ADO71629.1| Tetratricopeptide repeat family protein [Stigmatella aurantiaca
           DW4/3-1]
          Length = 479

 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 8/76 (10%), Positives = 27/76 (35%), Gaps = 3/76 (3%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           ++      ++  A+      ++ +A + F Q  +    +  +  +      +    G+  
Sbjct: 67  SEDSGPHALFLSALAAFDAGDYDRARKGFEQVVQT---SPQSLNAQFNLGLIAERQGRLA 123

Query: 112 QAASLGEEYITQYPES 127
            A +  E+ + + P  
Sbjct: 124 DAQAAYEKVLAKEPGH 139


>gi|90414116|ref|ZP_01222098.1| hypothetical protein P3TCK_07354 [Photobacterium profundum 3TCK]
 gi|90324788|gb|EAS41321.1| hypothetical protein P3TCK_07354 [Photobacterium profundum 3TCK]
          Length = 391

 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 8/77 (10%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA--FVQYSAGKYQQAASLGEE 119
           E A L L+E ++ KA     +  R        +++ +  A     Y    + +A    ++
Sbjct: 313 ELAQLLLQEGHYHKALTELERVKRKD------KQADVELAKVRAYYKLDNFDKAIIHAKQ 366

Query: 120 YITQYPESKNVDYVYYL 136
                P S +  +V YL
Sbjct: 367 ANNITPSSASKSWVKYL 383


>gi|61657362|emb|CAI44279.1| hypothetical protein [Thermotoga naphthophila RKU-10]
          Length = 278

 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 26/68 (38%), Gaps = 1/68 (1%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-KSLLMSAFVQYSAGKYQQ 112
           V    ++Y  A+    E ++ +A E F    R+ P          L      Y+ G Y++
Sbjct: 17  VSVANDLYSSALSAYLEGDYRRALELFENALREDPTIEERDSLVKLKMGICAYAIGDYEK 76

Query: 113 AASLGEEY 120
           A +    +
Sbjct: 77  ARAYLSNF 84


>gi|37680457|ref|NP_935066.1| hypothetical protein VV2273 [Vibrio vulnificus YJ016]
 gi|37199205|dbj|BAC95037.1| conserved hypothetical protein [Vibrio vulnificus YJ016]
          Length = 265

 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 16/127 (12%), Positives = 46/127 (36%), Gaps = 15/127 (11%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            Q   D+   +R     +    +    + +S +   + +++              G+ Y 
Sbjct: 152 YQNAVDLILKKRDYAGAIAAFKQFQIDFPDSNFAPNSHYWL--------------GQLYF 197

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            + +   A   F  V+ +Y D+    +A+ +L +        ++A++      + +P   
Sbjct: 198 AQKQDKEAAKSFAAVV-SYKDSNKRADALVKLGDIAARNNNPEQAKKYYQQAIDEHPGSA 256

Query: 262 WARYVET 268
            A+  ++
Sbjct: 257 SAKVAKS 263


>gi|294508598|ref|YP_003572657.1| Aerotolerance-related exported protein [Salinibacter ruber M8]
 gi|294344927|emb|CBH25705.1| Aerotolerance-related exported protein [Salinibacter ruber M8]
          Length = 378

 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 18/80 (22%), Gaps = 13/80 (16%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLG 117
           +E A        +  A E +                + L            +   A    
Sbjct: 159 FEAANEAYDRGRYETAVEAYRAVLDAGH------ESAALYHNLGNAYVRLDRTGLAVWAY 212

Query: 118 EEYITQYPESK----NVDYV 133
           E      P       N++YV
Sbjct: 213 ERGRRLRPGDPRLQHNLEYV 232


>gi|282900527|ref|ZP_06308471.1| conserved hypothetical protein [Cylindrospermopsis raciborskii
           CS-505]
 gi|281194580|gb|EFA69533.1| conserved hypothetical protein [Cylindrospermopsis raciborskii
           CS-505]
          Length = 171

 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 54/140 (38%), Gaps = 16/140 (11%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR-DFPFAGVARKSLLMSAFVQYSAGK 109
             ++   + +Y +  +  +   + ++ +   + +   F  +  A +  +       + G+
Sbjct: 3   TENLETAKNLYSQGKIAFENGEYQQSVDNLEKATSLLFQNSRFAGEVNIWLVNAYEATGR 62

Query: 110 YQQAASLGEEYITQYP----ESKNVDYVYYLVG---------MSYAQMIRDVPYDQRATK 156
            Q+A +L +E ++ +P    +S+    VY L           M+       +   Q  T 
Sbjct: 63  SQEAIALCQE-LSHHPHYEVKSQAKRLVYILKAPKLKRPKEWMTEIPDFATISERQTKTL 121

Query: 157 LMLQYMSRIVERYTNSPYVK 176
           +  Q  S + ++  +S YV 
Sbjct: 122 IAPQK-STLPKKSPDSEYVD 140


>gi|268326065|emb|CBH39653.1| conserved hypothetical secreted protein, containing
           tetratricopeptide repeats [uncultured archaeon]
          Length = 442

 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 21/153 (13%), Positives = 41/153 (26%), Gaps = 40/153 (26%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV----------------------A 93
            +++   +        N+  A   FN+     P                          +
Sbjct: 11  EEQQYINQGKDEYNRGNYDAAIYLFNKAVELNPDNEYLYNDLGLCYVALDDSDLAIPEFS 70

Query: 94  RKSLLMS----AF-----VQYSAGKY--QQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
           +   L S    A+       Y  G      A S   + I   P + +    YY  G++Y 
Sbjct: 71  KAIELNSDCVEAYYNRGLAYYGQGTSGAPDAISDFTKAIELDPGNVD---AYYNRGLAYN 127

Query: 143 QMIRD----VPYDQRATKLMLQYMSRIVERYTN 171
           + +R      P    +         +++E    
Sbjct: 128 KQVRGGEPFTPEHMESYGKARADFDKVLELDPE 160


>gi|254491164|ref|ZP_05104345.1| tetratricopeptide repeat domain protein [Methylophaga thiooxidans
           DMS010]
 gi|224463677|gb|EEF79945.1| tetratricopeptide repeat domain protein [Methylophaga thiooxydans
           DMS010]
          Length = 596

 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 31/250 (12%), Positives = 79/250 (31%), Gaps = 45/250 (18%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCS 84
           + F++ +  L   + Q ++  +   +      ++  Y   +      N   A  +F    
Sbjct: 314 VLFALGLLALEDKDGQEAKSFFSQLLKQGDPTQQATYFMGLSEQMNGNLDAALVWFASVP 373

Query: 85  ---RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
                F        +      +    G+  +A +         PE            + Y
Sbjct: 374 VHSNRF------DNAQNNYINILLERGELDKARAHLAAMRQDLPE----------QALQY 417

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL--AAKEVEIGRY 199
                 +  +   ++     ++  + +Y  S  ++ +R  +    N+L    K++   R+
Sbjct: 418 YLFEASILREADQSQDAFDLLTDAMGQYPQSEELRYSRAMIAESINKLDVLEKDL---RW 474

Query: 200 YLKRGEYVA-AIPRFQLVLANYSDAEHAEEAMARLVE-----------------AYVALA 241
            L++    A A+      L +    +  +EA+  + +                 AY  L 
Sbjct: 475 ILEKDPNNAQALNALGYTLTD--RTDRHQEALVMIQKALEIKPGDPFYLDSLGWAYYRLG 532

Query: 242 LMDEAREVVS 251
            +D+A + + 
Sbjct: 533 ELDKAEKYLR 542


>gi|188995741|ref|YP_001929993.1| TPR domain protein [Porphyromonas gingivalis ATCC 33277]
 gi|188595421|dbj|BAG34396.1| TPR domain protein [Porphyromonas gingivalis ATCC 33277]
          Length = 1160

 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 29/72 (40%)

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
             +  +  ++  +   ++ +L  Y + E   + + RL   Y  +    EA     LI + 
Sbjct: 612 AVFNERMEKFDESADTYETLLRRYPNYEKKMDVLYRLFMLYTRMNNKPEAERCRVLILQY 671

Query: 257 YPQGYWARYVET 268
           YP+   A+ +  
Sbjct: 672 YPEDNLAKALSN 683


>gi|94501052|ref|ZP_01307576.1| TPR repeat protein [Oceanobacter sp. RED65]
 gi|94426799|gb|EAT11783.1| TPR repeat protein [Oceanobacter sp. RED65]
          Length = 209

 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 58/158 (36%), Gaps = 13/158 (8%)

Query: 18  QLYKFALTIF-FSIAVCFLVGWERQSSRDVYLDSVTDVRYQR-EVYEKAVLFLKEQNFSK 75
           +  K +L +    ++ CF     +++        V ++  +  + Y+KA+  +  Q +S+
Sbjct: 6   KFIKTSLIVSMLFLSGCFASAPTKENVEANVQSKVIEIPDEAAKAYKKAITHMNHQQWSQ 65

Query: 76  AYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
           A       ++D+P      A   ++ S        ++ +A +  ++ I + P +      
Sbjct: 66  AKSLLVNMTQDYPQLSGPFANLGVIAS-----QQEQWDEAVAYLQKAIEKKPNNVK---A 117

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
              +G  Y Q  +     ++     +         Y N
Sbjct: 118 LNQLGWVYRQQGQ-FERAEQQYLKAIDADKDYAASYRN 154


>gi|152984880|ref|YP_001350232.1| hypothetical protein PSPA7_4896 [Pseudomonas aeruginosa PA7]
 gi|150960038|gb|ABR82063.1| lipoprotein, putative [Pseudomonas aeruginosa PA7]
          Length = 268

 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 21/55 (38%), Gaps = 4/55 (7%)

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
            Y +G+ Y         DQR       Y  R+V  +  +   + A+  + V R +
Sbjct: 94  LYQIGLIYMSRYN----DQRDDARATDYFQRVVREFPGTHAAEHAQARLLVMRQR 144


>gi|332708799|ref|ZP_08428770.1| serine/threonine protein kinase [Lyngbya majuscula 3L]
 gi|332352341|gb|EGJ31910.1| serine/threonine protein kinase [Lyngbya majuscula 3L]
          Length = 606

 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 37/266 (13%), Positives = 76/266 (28%), Gaps = 71/266 (26%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRY-------------QREVYEKAVLFLK 69
            L +   +   FL       + D   D  TD +              + +  E+A    K
Sbjct: 374 ILGVSLLLWKTFLSAQPTGENTDYKTDYKTDYKTDYKTDYKTEATVTEEQFLEEAEQLRK 433

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY-------SAGKYQQAASLGEEYIT 122
            + + +A + ++Q         +A+K+    A   +          K + A     + + 
Sbjct: 434 SRQYQEALKLYDQ--------AIAKKA--DFAEAYWGRCYSLNKLQKPEMAIVACNDALH 483

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN----------- 171
             P      +     G ++ Q  R V          L+  ++ +    +           
Sbjct: 484 FKPNYPEAVWSL---GQAFDQQQRSV--------EALRLYNQALTLKPDLTEAWLSQGIT 532

Query: 172 ------SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
                 S     A       +  LA         ++ +GE    + RF   +        
Sbjct: 533 LQKLGRSVEAITALEKAIALQRNLAEA-------WMTKGEAQMTLGRFNQAI------TS 579

Query: 226 AEEAMARLVEAYVALALMDEAREVVS 251
             +A+        AL L  +AR+ + 
Sbjct: 580 LNKALQIEPNHRNALKLRQQARKKLQ 605


>gi|242214311|ref|XP_002472979.1| predicted protein [Postia placenta Mad-698-R]
 gi|220727951|gb|EED81856.1| predicted protein [Postia placenta Mad-698-R]
          Length = 944

 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 34/100 (34%), Gaps = 20/100 (20%)

Query: 71  QNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
             F +A + + +      +F F+       +  A  QY AG    + +     +  +P+ 
Sbjct: 74  NEFKEAADNYTKSTQLDDEFVFSH------IQLAVAQYKAGNTANSMATFRRTLKAFPQR 127

Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
               + YY           ++  DQ+     +    R +E
Sbjct: 128 SE-PHNYY----------GELLLDQQRFGDAVDKFERAIE 156


>gi|94267436|ref|ZP_01290875.1| TPR repeat:Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1]
 gi|93452004|gb|EAT02706.1| TPR repeat:Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1]
          Length = 560

 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 57/174 (32%), Gaps = 30/174 (17%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
           LL  A   Y  G +++A    ++ + + P S+        +G++     R+ P       
Sbjct: 368 LLEEARAAYRLGDHEEAWRAYQQALEKSPRSREAA-----MGLATVAQSRNDPL------ 416

Query: 157 LMLQYMSRIVERYTNSPYVKG----------ARFYVTVGRNQLAAK------EVEIGRYY 200
             L    +I+ER       +           A  +  V R+ L          + +G  +
Sbjct: 417 TALHLYQQILERDPGDRQAQQGLVSLAPALAAAGHGEVLRDLLNRHPQAAPLHLTMGNLH 476

Query: 201 LKRGEYVAAIPRFQLVLANY--SDAEHAEEAMAR-LVEAYVALALMDEAREVVS 251
             +GE+  A   +Q  L       +   + A    L  +   L    +A E   
Sbjct: 477 ASQGEWTRARRAYQNALEEARRQASGDIDPAYHYNLAVSLDQLGQTGQALEHYR 530


>gi|51598471|ref|YP_072659.1| surface-located membrane protein 1 [Borrelia garinii PBi]
 gi|51573042|gb|AAU07067.1| surface-located membrane protein 1 [Borrelia garinii PBi]
          Length = 906

 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 24/62 (38%), Gaps = 3/62 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y KA + LK +N+  A   ++      P       + +  A      G   QA S  E+
Sbjct: 735 LYLKASINLKNENYQNAISLYSSVIEKNPEN---TSAYINLAKAYEKLGNKAQAISTLEK 791

Query: 120 YI 121
            I
Sbjct: 792 II 793


>gi|27807467|ref|NP_777182.1| aspartyl/asparaginyl beta-hydroxylase [Bos taurus]
 gi|2498164|sp|Q28056|ASPH_BOVIN RecName: Full=Aspartyl/asparaginyl beta-hydroxylase; AltName:
           Full=Aspartate beta-hydroxylase; Short=ASP
           beta-hydroxylase; AltName: Full=Peptide-aspartate
           beta-dioxygenase
 gi|162694|gb|AAA03563.1| aspartyl (asparaginyl) beta hydroxylase [Bos taurus]
 gi|296480620|gb|DAA22735.1| aspartyl/asparaginyl beta-hydroxylase [Bos taurus]
          Length = 754

 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 27/80 (33%), Gaps = 17/80 (21%)

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
             +   +  +     +V +Y  SP   GAR+      + LA K         +R   +  
Sbjct: 348 RKRGKIEEAVNAFEELVRKYPQSP---GARYGKAQCEDDLAEK---------RRSNEI-- 393

Query: 210 IPRFQLVLANYSDAEHAEEA 229
               +  +  Y +A    +A
Sbjct: 394 ---LRRAIETYQEAASLPDA 410


>gi|317121394|ref|YP_004101397.1| hypothetical protein Tmar_0549 [Thermaerobacter marianensis DSM
           12885]
 gi|315591374|gb|ADU50670.1| hypothetical protein Tmar_0549 [Thermaerobacter marianensis DSM
           12885]
          Length = 430

 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 32/272 (11%), Positives = 63/272 (23%), Gaps = 89/272 (32%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFP--------------------------------- 88
           ++A    +   + +A           P                                 
Sbjct: 160 QQAAEAFRNGRWDEARRLLEPLLSRHPQEADLWLLWGLTLWRAGSIHEAASALLRVDQCA 219

Query: 89  -----------------FAGVARKSLL--------MSAFVQYSAGKYQQAASLGEEYITQ 123
                            F     +  L        + A++   AG++++A +  +  +  
Sbjct: 220 DTLGRLAATARLRWEVEFQPWPLRVELPSAPGLDLVQAYLLAQAGRHEEALAQLDGALGL 279

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
            P          L  +      R       A    +  + +I        +   A   + 
Sbjct: 280 NPGFHA---ARLLKALILVDAARSGARGDDAFHQAVALLQQIPRDDPLYLWAVAA---MG 333

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM----ARLVEAYVA 239
               +    E+ +            A  RF+             EA+      L  AY A
Sbjct: 334 QAFREAGQPELAV-------TALRPAT-RFRR----------DPEALKAIRYELALAYHA 375

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           L     ARE ++ I          R    L++
Sbjct: 376 LGDRRRAREQLARIVTEDIG---YRDARRLLE 404


>gi|311262179|ref|XP_003129052.1| PREDICTED: peptidyl-prolyl cis-trans isomerase D-like [Sus scrofa]
          Length = 370

 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 49/121 (40%), Gaps = 2/121 (1%)

Query: 1   MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQRE 59
           +  V G      EA   +L   AL+   +I  C L   + Q + D  L+++  D    + 
Sbjct: 250 LRYVDGAKAVSEEADGLKLQPVALSCMLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKA 309

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y +A  +   + + +A     +     P    A ++ L+    +  A K ++ A+  + 
Sbjct: 310 LYRRAQGWQGLKEYDQALAALKKAQEIAP-EDKAIQAELLKVKQKIKAQKDKEKAAYAKM 368

Query: 120 Y 120
           +
Sbjct: 369 F 369


>gi|307184736|gb|EFN71058.1| 40 kDa peptidyl-prolyl cis-trans isomerase [Camponotus floridanus]
          Length = 367

 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 31/97 (31%), Gaps = 21/97 (21%)

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
            ++ YV        +  N  A         YLKR EY   I     VL    +     +A
Sbjct: 258 PDTIYVSLVDLKSVLLLNLAA--------VYLKRKEYRKVIHFCNEVLET-DNTNG--KA 306

Query: 230 MARLVEAY-----VALALMDEAREVVSLIQERYPQGY 261
           + R  +AY       L ++D       +    YP   
Sbjct: 307 LFRRGQAYSGLNEYKLGIVDL-ERAFEI----YPNDK 338


>gi|304310431|ref|YP_003810029.1| hypothetical protein HDN1F_07870 [gamma proteobacterium HdN1]
 gi|301796164|emb|CBL44370.1| Hypothetical protein HDN1F_07870 [gamma proteobacterium HdN1]
          Length = 920

 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 60/173 (34%), Gaps = 44/173 (25%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQ 104
           D+         + + A + L + N S+A   F +          A ++L  S +    VQ
Sbjct: 698 DNALPSDSNSLLLKLARIHLHQGNASQADALFER----------ALQALENSGYEEQNVQ 747

Query: 105 YSA-GKYQQAASLGEEY------ITQY--PESKNVDYVYYLVGMSYAQMIRDVP----YD 151
           +    +Y  A S  + Y        +Y  P++++ DY        +   + D+     + 
Sbjct: 748 WMTLKEYSAALSNQQRYADVLSAFDRYPIPDTEHSDY--------WYTQMLDIRAWALFS 799

Query: 152 QRATKLMLQYMSRIVERY----T--NSPYV-KGARFYVTVGRNQLA--AKEVE 195
              TK       ++  RY        S Y    A   + V ++ LA    EV 
Sbjct: 800 NGQTKEAAALYEQLASRYQSSKPAYRSKYALPDALAKLLVVQHVLAGGGNEVH 852


>gi|260427430|ref|ZP_05781409.1| tetratricopeptide TPR_2 repeat protein [Citreicella sp. SE45]
 gi|260421922|gb|EEX15173.1| tetratricopeptide TPR_2 repeat protein [Citreicella sp. SE45]
          Length = 510

 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 23/58 (39%), Gaps = 14/58 (24%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++  L  +++++ +A E F       P         L   +  Y  G+Y+ A  + + 
Sbjct: 333 QQGRLAYEKRDYERAAELFTD-----P---------LWRGYALYKDGQYKAAIEVLDR 376


>gi|145473829|ref|XP_001462578.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124430418|emb|CAK95205.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1058

 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 39/95 (41%), Gaps = 13/95 (13%)

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
            VA  + L      ++  K ++A  + + Y ++Y  + +     YL G+ Y  +      
Sbjct: 140 EVATSTELNEGKKLFTDNKTEEALKIFQTYQSKYGLNPD---ALYLSGLCYMSL------ 190

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           DQ   +  ++    +++ +    Y + A  Y+ + 
Sbjct: 191 DQE--EKYIEQFQTLIKTFPT--YKRTAYMYLAIC 221


>gi|16329708|ref|NP_440436.1| hypothetical protein slr2048 [Synechocystis sp. PCC 6803]
 gi|1652192|dbj|BAA17116.1| slr2048 [Synechocystis sp. PCC 6803]
          Length = 398

 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 58/186 (31%), Gaps = 35/186 (18%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQ-------REVYEKAVLFLKEQNFSK 75
            + + F  AV      +   S    +  +   R          E+  +   ++   NF +
Sbjct: 33  LIPLLFGAAVSAQSPSQTNPSNLPDVTPLLAQRSATDDRRQFNELLRQGKAYVDNGNFPQ 92

Query: 76  AYEYFNQ---CSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           A   + Q                + L     ++    G++ +A+   ++ +   P + + 
Sbjct: 93  AIAIYQQAAMLD--------GENAELFGSMGYLYARQGQFAEASRSFQQALRVNPNNPD- 143

Query: 131 DYVYY-LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
              YY  +G SYA+        Q          +  +    +S   +  ++ + +G   L
Sbjct: 144 ---YYDGLGFSYAR--------QGLLNEAASAYATAISLGPSSR--ESVKYRLALGIIML 190

Query: 190 AAKEVE 195
              +  
Sbjct: 191 QQGDYN 196


>gi|330910839|gb|EGH39349.1| biofilm PGA outer membrane secretin PgaA [Escherichia coli AA86]
          Length = 807

 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 76/229 (33%), Gaps = 41/229 (17%)

Query: 55  RYQREVYEKAV--LFLKEQNFSKAYEYFNQCSRDFPFAGVARKS-LLMSAFVQYSAGKYQ 111
             Q + Y++          ++  A     Q     P      K+ LL  A++    G+YQ
Sbjct: 128 EPQNKDYQRGQILTLADAGHYDTALFKLKQLKSGAP-----DKANLLAEAYIYKLTGRYQ 182

Query: 112 QAASLGEEYI------TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
                  E +       QYP     +YV  L     A  I D          +   + R+
Sbjct: 183 DELRAMTESLPENASKQQYPT----EYVLALRNNQLAAAIDDANLTPDIRADIHAELVRL 238

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKE-VEI---------GRYYLKRGEYVAAI---PR 212
               T S           +    LA    +EI          +Y   + +++ A+    R
Sbjct: 239 SFMPTRSE-----NERYAIADRALAQYAALEILWHDNPDRTAQYQRIQVDHLGALLTRDR 293

Query: 213 FQLVLANYSDAEHAEE-----AMARLVEAYVALALMDEAREVVSLIQER 256
           ++ V+++Y   +   +     A+  +  AY+      +A+ +++ +   
Sbjct: 294 YRDVISHYQRLKKTGQIIPPWALYWVASAYLKDQQPKKAQSIMTELFYN 342


>gi|298369448|ref|ZP_06980766.1| competence lipoprotein ComL [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298369783|ref|ZP_06981100.1| competence lipoprotein ComL [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298370546|ref|ZP_06981862.1| competence lipoprotein ComL [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298370633|ref|ZP_06981948.1| competence lipoprotein ComL [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298281243|gb|EFI22733.1| competence lipoprotein ComL [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298282006|gb|EFI23495.1| competence lipoprotein ComL [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298282340|gb|EFI23828.1| competence lipoprotein ComL [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298283451|gb|EFI24938.1| competence lipoprotein ComL [Neisseria sp. oral taxon 014 str.
           F0314]
          Length = 50

 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 7/39 (17%), Positives = 14/39 (35%)

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           MA +  AY  L     A +   ++   +P   + +    
Sbjct: 1   MAMMELAYKKLGKPQLAADSRRILAGNFPASPYLQKPWR 39


>gi|257058493|ref|YP_003136381.1| hypothetical protein Cyan8802_0599 [Cyanothece sp. PCC 8802]
 gi|256588659|gb|ACU99545.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8802]
          Length = 263

 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 73/245 (29%), Gaps = 60/245 (24%)

Query: 30  IAVCFLV-GWERQSSRDVYLDSVTDVRYQRE-------------------VYEKAVLFLK 69
           I  CF+  G    SS+ +   S   +   ++                   + +  + + +
Sbjct: 17  ILGCFVFLGCSTNSSQSIPKTSEIPITKNQKPIETTAPTTTAEDRKNAANLRQLGLQYRQ 76

Query: 70  EQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
           ++N+ KA E   +                 L++  +  + AGK   A    E  +T   +
Sbjct: 77  QENYPKAIESLEKSVSLDSKNLSG------LVLLGWTLHLAGKSPSAQQTLEHALTINSQ 130

Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
                     +G+ Y          Q   +  +   ++ V    N               
Sbjct: 131 HIET---LNALGIVY--------LVQGNLEQAIATHTKAVTINPN--------------- 164

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
           N++A   + +   Y +  +Y  AI   Q  +       H   A+A     Y  +    ++
Sbjct: 165 NEIAHYNLNLA--YQRLQQYTKAIKHGQQAIKLEPHNPHPWVALAI---TYWEMGDRKKS 219

Query: 247 REVVS 251
            E   
Sbjct: 220 HETYR 224


>gi|160875971|ref|YP_001555287.1| TPR repeat-containing protein [Shewanella baltica OS195]
 gi|160861493|gb|ABX50027.1| Tetratricopeptide TPR_2 repeat protein [Shewanella baltica OS195]
 gi|315268166|gb|ADT95019.1| von Willebrand factor type A [Shewanella baltica OS678]
          Length = 692

 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 45/163 (27%), Gaps = 36/163 (22%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
            A   F ++    L+    Q +     D+V     Q+     A+   + Q+++ A + F 
Sbjct: 324 VASVGFATLIGGLLLAAAPQPAHASVWDNVWKTTDQQ-----AMQAYQSQDYANAAKQFE 378

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
                                 QY AG Y+QA    E+         +     Y  G + 
Sbjct: 379 SPQWR--------------GSAQYKAGDYEQALKTFEQ--------DSSAQGLYNQGNAL 416

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
            Q+ +         K   Q        +        A   +  
Sbjct: 417 MQLGK-----PDKAKERYQAALEKQADFP----AAKANLELAE 450


>gi|124809132|ref|XP_001348498.1| Hsp70/Hsp90 organizing protein, putative [Plasmodium falciparum
           3D7]
 gi|75016029|sp|Q8ILC1|STI1L_PLAF7 RecName: Full=STI1-like protein
 gi|23497393|gb|AAN36937.1| Hsp70/Hsp90 organizing protein, putative [Plasmodium falciparum
           3D7]
          Length = 564

 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 4/61 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEY-FNQCSRDFPF-AGVARKSLL--MSAFVQYSAGKYQQAASL 116
           Y KA + ++ +N+ KA E         + F A   + + L    A    +  KY  A   
Sbjct: 281 YNKAAVHIEMKNYDKAVETCLYAIENRYNFKAEFIQVAKLYNRLAISYINMKKYDLAIEA 340

Query: 117 G 117
            
Sbjct: 341 Y 341


>gi|17561782|ref|NP_508026.1| FK506-Binding protein family member (fkb-6) [Caenorhabditis
           elegans]
 gi|3876510|emb|CAB07371.1| C. elegans protein F31D4.3, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 431

 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 51/154 (33%), Gaps = 22/154 (14%)

Query: 43  SRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK-SLLMS 100
           + +  LD+    + +  +Y +K  L L    + +A E         P   +A + ++L  
Sbjct: 246 TAEEKLDAAKQAKDRGTMYLQKGNLKLAYNKYKRAEEVLEYEKSTDP-EKMAERETILNG 304

Query: 101 AFVQY-----SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           A++          +  +     ++ +   P +       Y    +   M           
Sbjct: 305 AYLNLSLVCSKQNEQLECIKWCDKVLETKPGNVK---ALYRKATALLTM--------NEV 353

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
           +  ++   +IVE    +     A   + V RN +
Sbjct: 354 RDAMKLFEKIVEVEPENK---AAAQQIIVCRNTI 384


>gi|86131260|ref|ZP_01049859.1| aerotolerance-related exported protein BatE [Dokdonia donghaensis
           MED134]
 gi|85818671|gb|EAQ39831.1| aerotolerance-related exported protein BatE [Dokdonia donghaensis
           MED134]
          Length = 254

 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 7/76 (9%), Positives = 21/76 (27%), Gaps = 3/76 (3%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           +   + +E A     E  + +A + + +          +       A   +       + 
Sbjct: 23  QTPEQYFETANAHYAEGRYQEAIDDYKKILDS---NQESAAVYYNLANAHFKLNNVAPSI 79

Query: 115 SLGEEYITQYPESKNV 130
              E+     P   ++
Sbjct: 80  YYYEKAKQLAPADSDI 95


>gi|332879548|ref|ZP_08447243.1| tetratricopeptide repeat protein [Capnocytophaga sp. oral taxon 329
           str. F0087]
 gi|332682514|gb|EGJ55416.1| tetratricopeptide repeat protein [Capnocytophaga sp. oral taxon 329
           str. F0087]
          Length = 250

 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 9/68 (13%), Positives = 18/68 (26%), Gaps = 4/68 (5%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           +A      + + +A   +    ++      A           Y   +   A    E    
Sbjct: 27  QADSAYAAEKYEEAIPIYTALLKE---GEHA-DIYYNLGNCYYKTDRLALAILNYERAAL 82

Query: 123 QYPESKNV 130
             P S +V
Sbjct: 83  LDPGSSDV 90


>gi|281178140|dbj|BAI54470.1| conserved hypothetical protein [Escherichia coli SE15]
          Length = 807

 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 76/229 (33%), Gaps = 41/229 (17%)

Query: 55  RYQREVYEKAV--LFLKEQNFSKAYEYFNQCSRDFPFAGVARKS-LLMSAFVQYSAGKYQ 111
             Q + Y++          ++  A     Q     P      K+ LL  A++    G+YQ
Sbjct: 128 EPQNKDYQRGQILTLADAGHYDTALFKLKQLKSGAP-----DKANLLAEAYIYKLTGRYQ 182

Query: 112 QAASLGEEYI------TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
                  E +       QYP     +YV  L     A  I D          +   + R+
Sbjct: 183 DELRAMTESLPENASKQQYPT----EYVLALRNNQLAAAIDDANLTPDIRADIHAELVRL 238

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKE-VEI---------GRYYLKRGEYVAAI---PR 212
               T S           +    LA    +EI          +Y   + +++ A+    R
Sbjct: 239 SFMPTRSE-----NERYAIADRALAQYAALEILWHDNPDRTAQYQRIQVDHLGALLTRDR 293

Query: 213 FQLVLANYSDAEHAEE-----AMARLVEAYVALALMDEAREVVSLIQER 256
           ++ V+++Y   +   +     A+  +  AY+      +A+ +++ +   
Sbjct: 294 YRDVISHYQRLKKTGQIIPPWALYWVASAYLKDQQPKKAQSIMTELFYN 342


>gi|254173324|ref|ZP_04879997.1| tetratricopeptide repeat domain protein [Thermococcus sp. AM4]
 gi|214032733|gb|EEB73562.1| tetratricopeptide repeat domain protein [Thermococcus sp. AM4]
          Length = 340

 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 2/63 (3%)

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEH-AEEAMARLVEAYVALALMDEA-REVVSL 252
           EIG  Y    +  +AI  ++ V+    D       A+  L +AY    + ++A      L
Sbjct: 59  EIGHVYAHLDDVESAIELYKQVVERKKDDPEEYATALYYLADAYEHFGMPEKAIETYQKL 118

Query: 253 IQE 255
           ++ 
Sbjct: 119 LEH 121


>gi|154495172|ref|ZP_02034177.1| hypothetical protein PARMER_04221 [Parabacteroides merdae ATCC
           43184]
 gi|154085722|gb|EDN84767.1| hypothetical protein PARMER_04221 [Parabacteroides merdae ATCC
           43184]
          Length = 667

 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 57/196 (29%), Gaps = 48/196 (24%)

Query: 67  FLKEQNFSKA-YEYF-NQCSRDFPFAGVARKSLLMSAFVQY--------SAGKYQQAASL 116
            L+  N  +A  +    +           R+     A   Y         A     A   
Sbjct: 500 KLQTMNTQRAQIKKLREEIHAQ-------REIQKEYAHEYYLMGNECITKAHDPNAAIRS 552

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            ++ +  YP  + VD  +   G++   M              +  ++  V     S   +
Sbjct: 553 FDKALKLYP--EFVD-AWVRKGVTLLDMGDGF--------QAVTCLNEAVRLNPKSFKAR 601

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                     N+        G+ YL+   Y  A+  F   +        A E    L EA
Sbjct: 602 ---------YNR--------GKSYLQLKYYDEAVSDFMKAVDLKPKHAAAHE---YLAEA 641

Query: 237 YVALALMDEAREVVSL 252
           ++ +   + AR+   +
Sbjct: 642 FLHIGEEELARQHQDI 657



 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 52/164 (31%), Gaps = 29/164 (17%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFL-KEQNFSKAYEYFNQCSRDFPF--AGVARKS--LL 98
            +++        Y  E Y      + K  + + A   F++  + +P       RK   LL
Sbjct: 516 EEIHAQREIQKEYAHEYYLMGNECITKAHDPNAAIRSFDKALKLYPEFVDAWVRKGVTLL 575

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
                    G   QA +   E +   P+S       Y  G SY Q+        +     
Sbjct: 576 D-------MGDGFQAVTCLNEAVRLNPKSFK---ARYNRGKSYLQL--------KYYDEA 617

Query: 159 LQYMSRIVERYTN----SPYVKGARFYVTVGRNQLAAKEVEIGR 198
           +    + V+          Y+  A  ++     +LA +  +I  
Sbjct: 618 VSDFMKAVDLKPKHAAAHEYLAEAFLHIGE--EELARQHQDIAD 659


>gi|126657091|ref|ZP_01728262.1| TPR repeat protein [Cyanothece sp. CCY0110]
 gi|126621634|gb|EAZ92344.1| TPR repeat protein [Cyanothece sp. CCY0110]
          Length = 279

 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 65/200 (32%), Gaps = 41/200 (20%)

Query: 61  YEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           Y K V  +   N+  A E F    + ++    +           +      ++++A +  
Sbjct: 58  YNKGVDQIDVGNYQAAIEAFTESIKLNKSDADSYY------NRGYSYLLLEQFEEAINDY 111

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           ++ I     +    Y Y     +Y Q+        +  +  ++  S+ +E    + Y   
Sbjct: 112 DQAIEL---NAEFAYAYGNRCYAYYQL--------KNHEQAIEDCSQAIEL--EANYA-D 157

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
              Y+   ++ L   E              AAI  +   +A    +E+  +A      AY
Sbjct: 158 FYIYLGNAKDDLKMHE--------------AAILAYNQAIAL---SENNPKAYYNRALAY 200

Query: 238 VALALMDEA-REVVSLIQER 256
             L    +A  +    +Q  
Sbjct: 201 NRLGKSLQAVEDYTKALQLN 220


>gi|54303503|ref|YP_133496.1| hypothetical protein PBPRB1846 [Photobacterium profundum SS9]
 gi|46916933|emb|CAG23696.1| conserved hypothetical protein [Photobacterium profundum SS9]
          Length = 648

 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 23/68 (33%), Gaps = 8/68 (11%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           K +   K  ++ KA E     +          KS    A      GK +++ ++ E  + 
Sbjct: 370 KGIAEYKSGDYEKAIETLKPLTD--------IKSRYNLANAYAQTGKLEESEAIYESILK 421

Query: 123 QYPESKNV 130
             P   + 
Sbjct: 422 DDPNDADA 429


>gi|42521762|ref|NP_967142.1| TPR domain-containing protein [Bdellovibrio bacteriovorus HD100]
 gi|39574292|emb|CAE77796.1| putative TPR domain protein [Bdellovibrio bacteriovorus HD100]
          Length = 240

 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 59/191 (30%), Gaps = 43/191 (22%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
           +L  A   +  G Y+ A  +  + + Q   +  V            QM+  + YD+    
Sbjct: 8   MLSEARGYFINGNYKMAEPILNQMLLQNTRNPEV-----------YQMLATIFYDKGQFS 56

Query: 157 LMLQYMSRIVERYT-----------------------------NSPYVKGARFYVTVGRN 187
             ++   R +E                                 S   K +         
Sbjct: 57  KAIKTFRRALEIDPTYTDASVGLSIILNDLGKYDEGKQVFLDAQSQLEKKSGKQDPFVDE 116

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
           ++A+K  E+   Y +   Y  A+   + +L     +    E   R+ E +V L   D A 
Sbjct: 117 KIASKHEELADLYYQYKRYNEAL---EQLLKAQKLSSRKAEITMRIAEVHVQLGQGDRAI 173

Query: 248 EVVSLIQERYP 258
           + +  +   YP
Sbjct: 174 KDLKSLIREYP 184


>gi|16329409|ref|NP_440137.1| mitochondrial outer membrane 72K protein [Synechocystis sp. PCC
           6803]
 gi|1651890|dbj|BAA16817.1| mitochondrial outer membrane 72K protein [Synechocystis sp. PCC
           6803]
          Length = 266

 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 18/162 (11%), Positives = 41/162 (25%), Gaps = 42/162 (25%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           D       + +     Y +         +  A   +NQ     P       +L    +  
Sbjct: 64  DFTESIKLNDQDADAYYNRGYAKHVLGQYQAAITDYNQAISLNPEFAY---ALGNRCYAY 120

Query: 105 YSAGKYQQAASLGEEYITQYPESKN-------------------VDY------------V 133
           +   +Y +A       I   P   +                    DY             
Sbjct: 121 FLLSQYDKAIQDCSNAIEINPNYADFYVYRGNSQSQLGNETTAIADYNDAIRINAQHANA 180

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
           YY   +++ ++ +D        +  L   ++ ++   +S   
Sbjct: 181 YYNRALTHNRLKQD--------QQALADYNQSIQLDPDSAEA 214


>gi|34580745|ref|ZP_00142225.1| hypothetical protein [Rickettsia sibirica 246]
 gi|28262130|gb|EAA25634.1| unknown [Rickettsia sibirica 246]
          Length = 245

 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 18/46 (39%)

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
             A   Y   K  +A    + +I +YP S  +   Y+  G  + + 
Sbjct: 122 DLALAAYKDNKLTEAKDKFKHFIQKYPNSLLISNAYFWYGECFFKQ 167



 Score = 35.9 bits (82), Expect = 5.8,   Method: Composition-based stats.
 Identities = 14/133 (10%), Positives = 45/133 (33%), Gaps = 12/133 (9%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ- 111
           D+   ++ Y+ A+   K+   ++A + F    + +P + +   +        +    Y  
Sbjct: 113 DIAPDKQAYDLALAAYKDNKLTEAKDKFKHFIQKYPNSLLISNAYFWYGECFFKQKDYNG 172

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            A +  + Y    P+          + +S  ++        + T+     +++  + +  
Sbjct: 173 AAVNYLKGYKEL-PKGAKSSDGLLKLALSLGEL--------KKTQEACNMLAKFDKEFPT 223

Query: 172 SPYVKGARFYVTV 184
           +     A   +  
Sbjct: 224 NR--TAASKKMAE 234


>gi|328784392|ref|XP_395911.4| PREDICTED: tetratricopeptide repeat protein 37-like [Apis
           mellifera]
          Length = 1254

 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 40/120 (33%), Gaps = 34/120 (28%)

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
           + +  +G+ Y         DQ   +  ++    ++    N  +   +             
Sbjct: 545 WAWLQLGLQY--------LDQGNAEQAIKAFQHVIRVDPNDSHCWESL------------ 584

Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE-AYVAL--ALMDEARE 248
                   Y  RG Y +A+  +Q VL          +++  +++ A + L     +EA+ 
Sbjct: 585 -----ADAYFIRGAYTSALKSYQRVLE------LCPKSLYPMIQLANIKLIIGQYNEAKN 633



 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 36/114 (31%), Gaps = 18/114 (15%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
            + +L + N  +A + F    R  P      +S    A   +  G Y  A    +  +  
Sbjct: 551 GLQYLDQGNAEQAIKAFQHVIRVDPNDSHCWES---LADAYFIRGAYTSALKSYQRVLEL 607

Query: 124 YPESKNVDYVYY-LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            P+S       Y ++ ++  ++I                   I+     S Y+ 
Sbjct: 608 CPKS------LYPMIQLANIKLI------IGQYNEAKNDFEHILIY--ESRYIP 647


>gi|317178573|dbj|BAJ56361.1| hypothetical protein HPF30_0264 [Helicobacter pylori F30]
          Length = 331

 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 61/145 (42%), Gaps = 19/145 (13%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS----RDFPFAGVARK 95
           R++     ++   D+  Q+E++++A+  L+++++++A E          R + +   A  
Sbjct: 189 RKTQEKAKIEFDKDLSKQKEIFQEALTLLEDKSYAEARERLLWLEANSYRLY-YVRYA-- 245

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
                  V Y   KY++A    +E      ++  +  + +    S+ ++  D  Y     
Sbjct: 246 ----LGEVVYGEKKYREAIKYYKESALLNKKASYMPVLLWHTAWSFKKIKDDQNY----- 296

Query: 156 KLMLQYMSRIVERYTNSPYVKGARF 180
               ++++ +   Y +S   K A+ 
Sbjct: 297 ---YKFLNTLQRLYPSSEQAKMAKK 318


>gi|307261203|ref|ZP_07542878.1| hypothetical protein appser12_7670 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|306868934|gb|EFN00736.1| hypothetical protein appser12_7670 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
          Length = 391

 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 81/212 (38%), Gaps = 34/212 (16%)

Query: 48  LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           LD+  D   ++++  K   A  F+    + +A  Y+     +      A  SL     V 
Sbjct: 96  LDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDE---PEFAVNSLTQLMTVY 152

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
               ++++A ++ E+ I    ++  +   +Y     YAQ I++   D       L  +S+
Sbjct: 153 QKTKEWKKAINVAEKLIKIESDTDKIPLSHYY--CEYAQAIKNEDLDGH-----LSALSK 205

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
            +E                      A   + +G YYL + ++ +A+  ++ +L    D  
Sbjct: 206 ALEYSPQC-----------------ARASILLGDYYLAQNQFQSALKNYERILQQDPD-- 246

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQER 256
              E + ++   Y  +A  D A   + LI+  
Sbjct: 247 FISEVIEKIKACY--MAENDLANYELFLIRAN 276


>gi|255534040|ref|YP_003094412.1| TPR repeat-containing protein [Pedobacter heparinus DSM 2366]
 gi|255347024|gb|ACU06350.1| TPR repeat-containing protein [Pedobacter heparinus DSM 2366]
          Length = 467

 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 73/218 (33%), Gaps = 43/218 (19%)

Query: 56  YQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
            + E+Y  +  +F   + +S+A + F +      FA    + LL  A+V  +   Y+ A 
Sbjct: 100 SEAEIYILRGNIFNSLERYSEALDNFQKALE---FAETTDEILLQIAYVYQNMLDYESAI 156

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS-- 172
              ++ + Q  E+K+     Y +   Y  + +         +  +++    ++    S  
Sbjct: 157 IYIKQSLEQNMENKDG---LYELAFCYDILDKQ--------EESIKFYQEYIDNDPYSYA 205

Query: 173 ---------------PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
                               A  Y  + ++  A+        Y  +G  +  + R+   +
Sbjct: 206 AWYNLANSYHKLDLFEKAIDAYDYAILIKDNFASA-------YYNKGNALVQLDRYTEAI 258

Query: 218 ANYSDA----EHAEEAMARLVEAYVALALMDEAREVVS 251
             Y           +    + E Y  L  MDEAR    
Sbjct: 259 EVYKQTFEYEPPNADTYCAIGECYEKLERMDEARSYYK 296


>gi|203287667|ref|YP_002222682.1| hypothetical protein BRE_208 [Borrelia recurrentis A1]
 gi|201084887|gb|ACH94461.1| hypothetical protein BRE_208 [Borrelia recurrentis A1]
          Length = 758

 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 54/160 (33%), Gaps = 23/160 (14%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
               +K +N+S+A +  ++  +  P     +      A       +  +A     + I  
Sbjct: 33  GQEEIKNKNYSQAIKILSEAIQKHP---KEQDGYYFLAIAYRENNQLTEAEGALLDGIAI 89

Query: 124 YPESKNVDYVYY-LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
                N+DY  Y  +G    +        +    L ++Y S  ++   N           
Sbjct: 90  ---GGNIDYKLYFELGNIMFK------RGKGYYNLAIRYYSSSIKNMPNYDKA------- 133

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
               N+ A   VE G+   K  +Y  A   + + + +YS 
Sbjct: 134 --LLNR-ANSYVEQGKINFKEKDYKNAWDSYTMAIHDYSQ 170


>gi|218781231|ref|YP_002432549.1| transcriptional regulator, NifA subfamily, Fis Family
           [Desulfatibacillum alkenivorans AK-01]
 gi|218762615|gb|ACL05081.1| transcriptional regulator, NifA subfamily, Fis Family
           [Desulfatibacillum alkenivorans AK-01]
          Length = 1035

 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 20/58 (34%), Gaps = 4/58 (6%)

Query: 70  EQNFSKAYEYFNQCSR---DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
           E  F++A E + +       +P +       +   +     G Y Q   + +  I  +
Sbjct: 257 EGRFTEAVESYERVVTGVEQYPRSRFPLLGAITVGYSYAQVGNYAQGIGMLDS-IRTH 313


>gi|126729321|ref|ZP_01745135.1| hypothetical protein SSE37_24014 [Sagittula stellata E-37]
 gi|126710311|gb|EBA09363.1| hypothetical protein SSE37_24014 [Sagittula stellata E-37]
          Length = 152

 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 44/134 (32%), Gaps = 14/134 (10%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S T       + ++    L+ ++   A E+F   +   P    A       A   +   +
Sbjct: 25  SKTGSPAMDLLLKRGRDALEVEDTDAALEHFRALTDHAP--DFAE-GWHGLALAFFEKER 81

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
             ++    E  +   P+         L G++   +   V ++     L  +   R++E  
Sbjct: 82  LGESMDALEHVLALNPDHFGA-----LRGVA--AIHEQVGHEV----LAYRAYERVLELR 130

Query: 170 TNSPYVKGARFYVT 183
            +   V+ A   + 
Sbjct: 131 PHDEDVENALTRLE 144


>gi|307354797|ref|YP_003895848.1| TPR repeat-containing protein [Methanoplanus petrolearius DSM
           11571]
 gi|307158030|gb|ADN37410.1| TPR repeat-containing protein [Methanoplanus petrolearius DSM
           11571]
          Length = 253

 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 14/105 (13%), Positives = 30/105 (28%), Gaps = 15/105 (14%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K  L     +   F       +  +     +TD  Y  + Y  AV      ++  A  
Sbjct: 1   MKKILLIFAVFLIAAFFTS-PACADENTSAFQITDTGYIDQ-YNNAVDLANSGDYEAA-- 56

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFV-----QYSAGKYQQAASLGE 118
                ++      +A ++     +       Y  G +  A    +
Sbjct: 57  -LEAINK-----SLAEEANFALGYATKSGILYVMGDFTGALEAAD 95


>gi|257464647|ref|ZP_05629018.1| hypothetical protein AM202_05319 [Actinobacillus minor 202]
 gi|257450307|gb|EEV24350.1| hypothetical protein AM202_05319 [Actinobacillus minor 202]
          Length = 351

 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 8/58 (13%), Positives = 21/58 (36%), Gaps = 1/58 (1%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           E++  A   ++     +A + +    ++   A     + +    + Y  GK  +A   
Sbjct: 7   ELFSTATQLVQAGKLDEAIDIYQSIQKEDS-AEWFANAQVNLGVLFYKQGKVSEAIGA 63


>gi|238755160|ref|ZP_04616506.1| hypothetical protein yruck0001_25740 [Yersinia ruckeri ATCC 29473]
 gi|238706607|gb|EEP98978.1| hypothetical protein yruck0001_25740 [Yersinia ruckeri ATCC 29473]
          Length = 294

 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 33/150 (22%), Positives = 48/150 (32%), Gaps = 29/150 (19%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           +  NF  AYE F+      P    AR   L      Y  G++  A    + +    P   
Sbjct: 108 QAGNFDAAYEAFDSVLELDPTYNYAR---LNRGIALYYGGRFPLAQDDLQAFYQDDPNDP 164

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTN--SPYVK 176
                 YLV         +   D +A ++ L+              IVE Y    S    
Sbjct: 165 FRSLWLYLV---------EKEIDPQAAEVALKQRYEKSNRGQWGWNIVEFYLGNISEKTL 215

Query: 177 GARFYVTVGRN-QLAAK----EVEIGRYYL 201
             R  +    N  LA      +  +G+YYL
Sbjct: 216 MERLKMDATDNTSLAEHLSETDFYLGKYYL 245


>gi|262196932|ref|YP_003268141.1| hypothetical protein Hoch_3748 [Haliangium ochraceum DSM 14365]
 gi|262080279|gb|ACY16248.1| hypothetical protein Hoch_3748 [Haliangium ochraceum DSM 14365]
          Length = 286

 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 17/128 (13%), Positives = 38/128 (29%), Gaps = 37/128 (28%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK-----SLLMSAFVQYSAGKYQQAASL 116
            +A    +   F +A    N     +P A ++ +     + L+     +  G    A   
Sbjct: 28  AEAREAFRLGRFDEAIPALNYL--LYPDARLSDRGDLVEAHLLLGVAHFEVGDRADARRE 85

Query: 117 GEEYITQYPESKNVDYVYYL-------------VGMSYAQMIRDVPYD----QRATKLML 159
            EE               +L               +++ +  + V  D    Q   + + 
Sbjct: 86  LEE-------------ALFLDDSVILDPLLFSEEAIAFFEERKQVFRDRAARQEEARKLA 132

Query: 160 QYMSRIVE 167
           +  +R+ E
Sbjct: 133 EERARLRE 140


>gi|242001014|ref|XP_002435150.1| heat shock protein 70 (HSP70)-interacting protein, putative [Ixodes
           scapularis]
 gi|215498480|gb|EEC07974.1| heat shock protein 70 (HSP70)-interacting protein, putative [Ixodes
           scapularis]
          Length = 935

 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 29/80 (36%), Gaps = 12/80 (15%)

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
                    +  N+ AA         +K   Y  A+     VL          +A+ R  
Sbjct: 43  TDEENHKAVLLNNRAAAN--------IKLRRYEDAVKDATEVLEM---TPSDVKALYRRS 91

Query: 235 EAYVALALMDEA-REVVSLI 253
           +AY AL  ++EA R+   ++
Sbjct: 92  QAYEALGRIEEAFRDARKVL 111


>gi|209515957|ref|ZP_03264818.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia sp. H160]
 gi|209503615|gb|EEA03610.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia sp. H160]
          Length = 287

 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 16/96 (16%), Positives = 29/96 (30%), Gaps = 3/96 (3%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           +  I    A   L G     S +    S +           A   L+  +   A   + +
Sbjct: 10  SFAIALPFAAVLLTGCASGGSFNPRPVSSSRNTDGMSDLRVADSALRAGDVELASTLYEK 69

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
                P +    ++ L      Y AG   +A +L +
Sbjct: 70  ALAANPNS---TEAQLGLGDTMYLAGDLDRARALYQ 102


>gi|257058678|ref|YP_003136566.1| MCP methyltransferase, CheR-type with Tpr repeats [Cyanothece sp.
           PCC 8802]
 gi|256588844|gb|ACU99730.1| MCP methyltransferase, CheR-type with Tpr repeats [Cyanothece sp.
           PCC 8802]
          Length = 527

 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 9/74 (12%), Positives = 32/74 (43%), Gaps = 3/74 (4%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           ++ +  +    +   + ++ E+    ++++ +S A E  ++    +P +      L+   
Sbjct: 351 TTTEDNISQTIEELTEIDLLEEVKQLIEQKKYSFAIEKLHRILEKYPNS-FQGNYLMAEI 409

Query: 102 FVQYSAGKYQQAAS 115
           +     G+Y++A  
Sbjct: 410 YAN--LGRYEEAID 421


>gi|158299854|ref|XP_319871.4| AGAP009119-PA [Anopheles gambiae str. PEST]
 gi|157013718|gb|EAA14705.5| AGAP009119-PA [Anopheles gambiae str. PEST]
          Length = 397

 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 28/100 (28%), Gaps = 14/100 (14%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVL-------FLKEQNFSKAYEYFNQCSRDFPF 89
           G     +       V D     E +++A            EQ + +A + F +  +  P 
Sbjct: 84  GCVEPDTEPDQPMGVADKEPTEEEFDQANDLRAQAAAAYSEQKYDEAVKLFTEAIQLNPK 143

Query: 90  AG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
           +    A++             K           +   P+S
Sbjct: 144 SALYYAKRGQ-----AYLKLQKPNACIRDCNRALEINPDS 178


>gi|78044885|ref|YP_359093.1| TPR domain-containing protein [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|77997000|gb|ABB15899.1| TPR domain protein [Carboxydothermus hydrogenoformans Z-2901]
          Length = 218

 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 37/130 (28%), Gaps = 14/130 (10%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D +Y        +L+++   +  A           P +     + L         GKY +
Sbjct: 100 DKKYYPAYLNLGILYIETGKYDLAANTLKNAIALQPKSS---NAHLNLGIAYTKLGKYNE 156

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A     E     P S  +    Y +G++Y +M           +         +E     
Sbjct: 157 ALKELNEAYKLSPGSTRI---IYEIGVTYEKM--------GKIEEAKYQYKSALEFDPKF 205

Query: 173 PYVKGARFYV 182
              K A   +
Sbjct: 206 EEAKKALERL 215


>gi|54302378|ref|YP_132371.1| hypothetical protein PBPRB0699 [Photobacterium profundum SS9]
 gi|46915800|emb|CAG22571.1| hypothetical protein PBPRB0699 [Photobacterium profundum SS9]
          Length = 391

 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 24/58 (41%), Gaps = 8/58 (13%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA--FVQYSAGKYQQAASLGEE 119
           A L L+E ++ KA    ++          A+K+ +  A     Y    +++A    ++
Sbjct: 315 AQLLLQEGHYHKALSELDRVKDK------AKKADVELAKVRAYYKLEDFERAIIHAKQ 366


>gi|298208138|ref|YP_003716317.1| hybrid sensory kinase [Croceibacter atlanticus HTCC2559]
 gi|83848059|gb|EAP85929.1| hybrid sensory kinase [Croceibacter atlanticus HTCC2559]
          Length = 730

 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 36/97 (37%), Gaps = 15/97 (15%)

Query: 61  YEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ-------YSAGKYQQ 112
           Y + A LF+ +  +S+A +Y +     F       +  L  A+V        Y  G Y  
Sbjct: 77  YREYAQLFILQGKYSRAKDYLDLAESIFEE----EQLPLNKAYVLKEKGRIAYEEGDYIT 132

Query: 113 AASLGEEYITQYPESKNV-DYV--YYLVGMSYAQMIR 146
           A  +    I    +S +   Y    YL+G S+     
Sbjct: 133 AIEVINLAIEDLSDSPDKYPYAQALYLIGKSHFANFN 169


>gi|119775308|ref|YP_928048.1| TPR domain-containing protein [Shewanella amazonensis SB2B]
 gi|119767808|gb|ABM00379.1| TPR domain protein [Shewanella amazonensis SB2B]
          Length = 701

 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 5/53 (9%), Positives = 15/53 (28%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
               R    +  L           +Y +    ++   + +A + + +     P
Sbjct: 378 AAHYRAGDYEAALKGFEQDSSAAGLYNQGNALMQLGRYDEAAKRYQKALEQQP 430


>gi|124266401|ref|YP_001020405.1| TPR repeat-containing protein [Methylibium petroleiphilum PM1]
 gi|124259176|gb|ABM94170.1| TPR repeat protein [Methylibium petroleiphilum PM1]
          Length = 389

 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 13/97 (13%), Positives = 34/97 (35%), Gaps = 1/97 (1%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
              + +  S+          + +R V      D  + + +    ++    +++  A +++
Sbjct: 160 SLLVDLGASLVALDRDAMHGEPTRLVERALALDPAHPKALAFAGLIAFDRKDYPTAVKHW 219

Query: 81  NQCSRDF-PFAGVARKSLLMSAFVQYSAGKYQQAASL 116
              +R   P +  A++     A  +  AG    A S 
Sbjct: 220 EALARVEPPDSPFAQQIRASVAQARQLAGLPPSAESA 256


>gi|326383139|ref|ZP_08204828.1| hypothetical protein SCNU_09381 [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326198275|gb|EGD55460.1| hypothetical protein SCNU_09381 [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 230

 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 40/102 (39%), Gaps = 14/102 (13%)

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV-EIGRYYLK--RGE 205
              Q         ++ +   + +          V   R +L A E+ ++   Y++   G 
Sbjct: 42  ERTQTRLDETRARLTELPTEFPS----------VEELRAKLTADELRKVAEPYIEATTGL 91

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAY-VALALMDEA 246
           Y +   R +  +       + EE +AR+ +AY  A+ L ++A
Sbjct: 92  YNSLAERGEGAVERLRQTPYVEENLARVEKAYNDAVDLTEDA 133


>gi|225850523|ref|YP_002730757.1| tetratricopeptide repeat domain protein [Persephonella marina
           EX-H1]
 gi|225644833|gb|ACO03019.1| tetratricopeptide repeat domain protein [Persephonella marina
           EX-H1]
          Length = 336

 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 40/103 (38%), Gaps = 8/103 (7%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
            LV      + D     ++D++ +  V   AV  +  ++F +A +  ++      ++   
Sbjct: 193 LLVLAVETGNFDEMKKYLSDLKNEETVSSIAVKLIDNEDFYRAKDILDR------YSEKE 246

Query: 94  RKSLLMSAFVQ-YS-AGKYQQAASLGEEYITQYPESKNVDYVY 134
           +K  +  A+   Y   G   +A    E   T+ P    + Y +
Sbjct: 247 KKGYISYAYGYLYEANGDISRALFYYERAFTKNPSDPYIAYAF 289


>gi|224588324|gb|ACN58948.1| hypothetical protein AKSOIL_0107 [uncultured bacterium BLR7]
          Length = 428

 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 46/181 (25%), Gaps = 39/181 (21%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSV-TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
               + A+ FL G     S      +  T        Y+      +E  +++A + F++ 
Sbjct: 80  LALIAGAMLFLQGAADPPSPSSVAAAPITANTEAAAAYQDCERLFREGKYAEAVQAFSRA 139

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE------------SKNVD 131
               P      ++     +   S   Y +A +     I   P             S   D
Sbjct: 140 VERDPN---MAQAYAFRGYTHNSLNDYDRAIADFARAIAIDPNDATSFSDRGMVFSNKKD 196

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKL----------------MLQYMSRIVERYTNSPYV 175
           Y      ++       +  D + T                   L      +    N  Y 
Sbjct: 197 YA---RAIADYDQA--IKLDPKLTYAFNGRGTVYNALGDDDRALADYDEAIRLDPN--YA 249

Query: 176 K 176
           +
Sbjct: 250 E 250


>gi|197335049|ref|YP_002156578.1| tetratricopeptide repeat family protein [Vibrio fischeri MJ11]
 gi|197316539|gb|ACH65986.1| tetratricopeptide repeat family protein [Vibrio fischeri MJ11]
          Length = 389

 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 55/178 (30%), Gaps = 28/178 (15%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A  ++      +A + F Q   +         +LL    +     +++QA       +  
Sbjct: 114 AKDYMVSGILDRAEKIFEQLLEE---PDHREAALLQLVAIHQQTREWEQAIQFANSLVRM 170

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
             +   +D  +Y                    +L +Q ++       NS   K       
Sbjct: 171 GRKKLKLDIAHY------------------YCELAMQELAD-----ENSNKAKQNLKKAL 207

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
              NQ     + + +  ++   Y  A+   + VL    D +   EA+  L E Y  L 
Sbjct: 208 SSDNQCVRASIMMAKLLMEEDNYKGALVHLESVLD--QDIDFVSEALPLLAECYEKLD 263


>gi|257058461|ref|YP_003136349.1| peptidase M48 Ste24p [Cyanothece sp. PCC 8802]
 gi|256588627|gb|ACU99513.1| peptidase M48 Ste24p [Cyanothece sp. PCC 8802]
          Length = 669

 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 29/77 (37%), Gaps = 9/77 (11%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQC-----SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
              +  LK Q + +A +           R  PF     ++ +  A      G+  ++ +L
Sbjct: 4   NDGLKALKNQQYPEAVQLLEAYCQNNSDRQSPF--Y-IQAQIALARAYRGNGELNKSLAL 60

Query: 117 GEEYITQYPESKNVDYV 133
            +E +TQ   ++   + 
Sbjct: 61  CQE-LTQNSNNEARQWA 76


>gi|196010431|ref|XP_002115080.1| hypothetical protein TRIADDRAFT_58866 [Trichoplax adhaerens]
 gi|190582463|gb|EDV22536.1| hypothetical protein TRIADDRAFT_58866 [Trichoplax adhaerens]
          Length = 1307

 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 39/124 (31%), Gaps = 24/124 (19%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQ--------CSRDFPFAGVARKSLLMSAFVQYSAG 108
               Y   ++   +  + +A   F +          R+ P      KS    A       
Sbjct: 685 ASSYYNIGIINKMQDKYEEAISMFEKALKIQLSALGRNHP---ETAKSYFYVAEAYSKLN 741

Query: 109 KYQQAASLGEEYIT-----QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           KY++A  + ++ +        P   NV  VY          I  +  DQ   K  L   +
Sbjct: 742 KYEEAMLMFKKSLEIQVSVLGPNHPNVSAVY--------DRIASIYDDQGNYKEALSSYN 793

Query: 164 RIVE 167
           + +E
Sbjct: 794 KALE 797


>gi|86158080|ref|YP_464865.1| hypothetical protein Adeh_1655 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85774591|gb|ABC81428.1| hypothetical protein Adeh_1655 [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 243

 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 15/42 (35%)

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
            +        G A  + L     QY  G++  A +  E Y+ 
Sbjct: 107 EKVIATHGGTGAALVAELARGDAQYKLGEWDAALASYERYLK 148


>gi|108762237|ref|YP_633061.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622]
 gi|14517942|gb|AAK64445.1|AF377339_6 serine/threonine kinase associate protein KapB [Myxococcus xanthus]
 gi|108466117|gb|ABF91302.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622]
          Length = 271

 Score = 37.0 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 24/71 (33%), Gaps = 3/71 (4%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           E A L + E ++  A     +  R  P      ++ L         G Y +A    E   
Sbjct: 151 ELAALMMDEGDYRSAITQLKEVVRLEPDNF---EAQLDLGICFAQKGFYAEAERAYERAR 207

Query: 122 TQYPESKNVDY 132
              PE   ++Y
Sbjct: 208 ALNPEDLLLNY 218


>gi|332664651|ref|YP_004447439.1| hypothetical protein Halhy_2698 [Haliscomenobacter hydrossis DSM
           1100]
 gi|332333465|gb|AEE50566.1| Tetratricopeptide TPR_1 repeat-containing protein
           [Haliscomenobacter hydrossis DSM 1100]
          Length = 243

 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 6/88 (6%), Positives = 26/88 (29%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
            S   Y  ++      +  Y       +++ + +A   +   ++          +     
Sbjct: 46  DSESNYRKALERKNSPKGQYNLGNAIYQQKRYQEAITRYENAAKKATTPSDKAAAYHNLG 105

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKN 129
              +     +++ +  ++ +   P  K 
Sbjct: 106 NTHFQLNDLEKSVASYKQALRLNPADKE 133


>gi|302770493|ref|XP_002968665.1| hypothetical protein SELMODRAFT_440495 [Selaginella moellendorffii]
 gi|300163170|gb|EFJ29781.1| hypothetical protein SELMODRAFT_440495 [Selaginella moellendorffii]
          Length = 824

 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 23/62 (37%), Gaps = 3/62 (4%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
             +Y    L      F +A E +++     P +    ++ L  A     AG  ++A    
Sbjct: 432 DALYNLGGLLRDTGRFQRAAEVYSRVLSLNP-SHW--QAQLNRAVSLLGAGDTEEARKAL 488

Query: 118 EE 119
           +E
Sbjct: 489 KE 490


>gi|262158968|ref|ZP_06030080.1| GGDEF family protein [Vibrio cholerae INDRE 91/1]
 gi|262169327|ref|ZP_06037019.1| GGDEF family protein [Vibrio cholerae RC27]
 gi|262022140|gb|EEY40849.1| GGDEF family protein [Vibrio cholerae RC27]
 gi|262029153|gb|EEY47805.1| GGDEF family protein [Vibrio cholerae INDRE 91/1]
          Length = 578

 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 72/212 (33%), Gaps = 32/212 (15%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQ-CSRDFPFAG--VARKSLLMS 100
           D+ L  + D      +Y    L +     +  A +Y N+            +  +     
Sbjct: 126 DLLLSLLPDYVDPSGIYNDVGLLMGTLGQYESALDYLNKALEYRLEQGNPLLIAQVEHSL 185

Query: 101 AFVQYSAGKYQQAASLGEEYITQY--PES--KNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
               +  G+Y+++    E+    +  P +    + YV+  +G +Y ++   V  DQ    
Sbjct: 186 GDTYFKQGRYEESILYFEQ-AKAHLTPANYLFGLAYVHLGLGKAYIELNNFVEGDQ-HLF 243

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             L+Y++          +       +      LA        +  K  +Y  AI      
Sbjct: 244 QALEYVN---------QHKDQHLQGLIYL--SLAQ-----AHF--KEQKYAQAIDYANQA 285

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           +A  S++           +AY+ LA + EA +
Sbjct: 286 VA-ISESASLPR---IKAQAYLQLAKIAEAEQ 313


>gi|256839603|ref|ZP_05545112.1| TPR repeat-containing protein [Parabacteroides sp. D13]
 gi|256738533|gb|EEU51858.1| TPR repeat-containing protein [Parabacteroides sp. D13]
          Length = 707

 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 30/223 (13%), Positives = 73/223 (32%), Gaps = 48/223 (21%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCS 84
           +  ++AV F+   +   +   + D +T        Y  +  ++L++ +  KA   +N+  
Sbjct: 127 MLVNMAVAFIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAI 186

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY------VYYLV- 137
              P+   A  +    A + Y    Y+ A +   E +    +++   Y      V Y + 
Sbjct: 187 EMDPY--YAP-AYGNRAILHYQMDDYKDALADLNEALRL--DTRESGYYINRGLVRYQMN 241

Query: 138 ----GMSYAQMIRDVPYDQRATK--------------LMLQYMSRIVERYTNSPYVKGAR 179
                M+    +  +       +                ++    ++++  ++       
Sbjct: 242 DLRGAMADYDQVISMDRRNLIARFNRGLLRFQVGDNNRAIEDFDVVIQQEPDN------- 294

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
            Y+      L   E          G+Y  A+  + +VL  Y  
Sbjct: 295 -YMAYYNRALLRFE---------TGDYRGAVQDYDVVLKQYPT 327


>gi|152990369|ref|YP_001356091.1| hypothetical protein NIS_0620 [Nitratiruptor sp. SB155-2]
 gi|151422230|dbj|BAF69734.1| hypothetical protein [Nitratiruptor sp. SB155-2]
          Length = 660

 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 52/141 (36%), Gaps = 13/141 (9%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV---ARKSLLMSAFVQ 104
           ++ +T  + +   + + + +  + N+  A            +        +   + A   
Sbjct: 188 VEKLTKEQKKEYRFIRGLSYFYQGNYENAIRLL--LQTYKEYEEYLIDNPQFYYIVAENA 245

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y  G+Y+ A  L +  I +Y ++++V        +     + D+ ++       + Y  R
Sbjct: 246 YRYGEYKTAKQLFKR-ILKYVKNRDV----LQKTL---LRLGDIAFNSNNIHESIGYYYR 297

Query: 165 IVERYTNSPYVKGARFYVTVG 185
           ++ ++  S Y   A+  +   
Sbjct: 298 LIRKFPKSKYATIAKLKLLYI 318



 Score = 35.5 bits (81), Expect = 9.1,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 8/52 (15%)

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
           A ++  +G YY        A+  F  V A + D  +  +A+ +L + Y+A+ 
Sbjct: 52  ALRDFRVGSYYD-------ALNEFSYV-AKFPDTPYFLDALYQLAKTYLAIG 95


>gi|55379675|ref|YP_137525.1| TPR repeat-containing protein [Haloarcula marismortui ATCC 43049]
 gi|55232400|gb|AAV47819.1| tetratricopeptide repeat protein [Haloarcula marismortui ATCC
           43049]
          Length = 242

 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 21/57 (36%), Gaps = 2/57 (3%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            A   L+E  +  A   + +       +  A  +    A+  + +G+ +QA    E 
Sbjct: 106 AAHAELEE--WDAAIGAYKEALNFDEESDHAATAETNLAYALWKSGRSEQALEHAER 160


>gi|300870878|ref|YP_003785749.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000]
 gi|300688577|gb|ADK31248.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000]
          Length = 233

 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 63/180 (35%), Gaps = 42/180 (23%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQ---CSRDFP---FAGVARKSLLMSAFVQYSAGKYQQA 113
            ++KA +F  E  + +A  Y+N+      ++    +   + K+ L         G+Y++A
Sbjct: 16  YFDKANIFSLEGKYEEAIVYYNKSIELDNNYSVAYYNRGSVKADL---------GEYEEA 66

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
               +  I       N  Y Y   G++   +           +  ++   + +E   +S 
Sbjct: 67  IKDYDMAIEL---DHNYTYAYNNRGLAKDYL--------GEYEEAIKDYDKAIEL--DSD 113

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRY-------------YLKRGEYVAAIPRFQLVLANY 220
           Y   A     + +N L   E  +  +             Y  RG     + +++  + +Y
Sbjct: 114 YS-DAYNNRGIVKNILGKYEEAVKDFNKVIELNPNDSDAYYNRGTVKDVLGQYEEAIKDY 172


>gi|209527043|ref|ZP_03275559.1| sulfotransferase [Arthrospira maxima CS-328]
 gi|209492554|gb|EDZ92893.1| sulfotransferase [Arthrospira maxima CS-328]
          Length = 514

 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 39/116 (33%), Gaps = 14/116 (12%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
              E+  +A    +     +A   ++Q     P    A              G   +A +
Sbjct: 2   SAGELLRQANQLKRSGKLDEAIALYHQVIDINPHFAWAYHG---LGDAWAKQGNLDEAVA 58

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
              E +  +P+S    ++YY +G   A++           +  + Y+ + ++   +
Sbjct: 59  WYSECLKIHPDS---AWLYYSLGEVLAEL--------GDLEAAVDYLQKAIDIKPD 103


>gi|194335812|ref|YP_002017606.1| Tetratricopeptide TPR_2 repeat protein [Pelodictyon
           phaeoclathratiforme BU-1]
 gi|194308289|gb|ACF42989.1| Tetratricopeptide TPR_2 repeat protein [Pelodictyon
           phaeoclathratiforme BU-1]
          Length = 577

 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 83/257 (32%), Gaps = 55/257 (21%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           L+  A++     + C         S     DSV +   +   +  A L   + ++ +A E
Sbjct: 22  LHMAAISSVLLFSGCASSKPVLSGS--TVPDSVVEASKRE--FVAASLKSAKGDYREAVE 77

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
            + +   D P +  A    L  A+V  + G    A    E+ +   P +K   Y  +L  
Sbjct: 78  RYRKLLHDQP-SNAAIHYALSKAWV--ALGVPDSARLYSEKSVLLNPRNKY--YTAFLAF 132

Query: 139 MSYAQMIRDVPY-----------DQRATK----------------LMLQYMSRIVERYTN 171
           +S+   + D              D  +T+                  L     I+ R   
Sbjct: 133 LSH--QMHDYGRAAELYRQLAVLDPGSTEPLTSLALEYLAVDQPEKSLAVFQEILARDPK 190

Query: 172 SPYV--------------KGARFYVTVGRNQLAAKE---VEIGRYYLKRGEYVAAIPRFQ 214
           +                 + A   V     Q  +KE   + +G  YL+  +Y  A   F+
Sbjct: 191 NEDALVQMLFVEIKLTHYQEAIATVKELIGQSDSKEKLHLTLGELYLQTRQYGLASRTFR 250

Query: 215 LVLANYSDAEHAEEAMA 231
            +L +   +  A  A+ 
Sbjct: 251 ELLKSNPGSVSAWLALF 267


>gi|183222020|ref|YP_001840016.1| hypothetical protein LEPBI_I2662 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189912087|ref|YP_001963642.1| hypothetical protein LBF_2580 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167776763|gb|ABZ95064.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167780442|gb|ABZ98740.1| Hypothetical protein; putative signal peptide [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 314

 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 39/107 (36%), Gaps = 17/107 (15%)

Query: 136 LVGMSYAQMIRDVPY--DQRATKLMLQYMSRIVERYTNSPY-VKGARFYVTVGRNQLAAK 192
           L   S  ++ R +    +  + +   +   ++V  +   P     A + + V        
Sbjct: 175 LKIKSQFELARSLDRIGNPESEEKAYKEYLKLVTEFPKHPELTPRANYAMAVLL------ 228

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                   +++ EY +A  +   V+ N+ ++E    A   L + Y +
Sbjct: 229 --------IRKKEYRSAAHQLVQVIKNFKESEEFLPAHYYLGKIYES 267


>gi|134045715|ref|YP_001097201.1| hypothetical protein MmarC5_0675 [Methanococcus maripaludis C5]
 gi|132663340|gb|ABO34986.1| TPR repeat-containing protein [Methanococcus maripaludis C5]
          Length = 344

 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 48/144 (33%), Gaps = 42/144 (29%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA--------------RKSL------LMS- 100
           +  + +L   NF K+ E F++  R  P+   A               +++      L   
Sbjct: 57  DSGLDYLGNGNFEKSIESFDETLRINPYHVEALVSKGYILYAINRSEEAIECYDKALEIN 116

Query: 101 ----------AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
                      +  +   +Y +A    ++ +  Y E+     VYY+ G S   + R    
Sbjct: 117 SDYYDVWQYKGYALHDLERYDEAIECFDKSLEIYDENPE---VYYMKGASLYGLER---- 169

Query: 151 DQRATKLMLQYMSRIVERYTNSPY 174
                   L+ +   +E Y N  Y
Sbjct: 170 ----YDEALECLDIALETYPNDIY 189


>gi|82776644|ref|YP_402993.1| tetratricopeptide repeat protein [Shigella dysenteriae Sd197]
 gi|309789047|ref|ZP_07683642.1| tetratricopeptide repeat family protein [Shigella dysenteriae 1617]
 gi|81240792|gb|ABB61502.1| putative heat shock protein [Shigella dysenteriae Sd197]
 gi|308923318|gb|EFP68830.1| tetratricopeptide repeat family protein [Shigella dysenteriae 1617]
          Length = 389

 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 61/187 (32%), Gaps = 38/187 (20%)

Query: 64  AVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
              ++    + +A + FNQ     DF    + +   +  A       ++Q+A  + E  +
Sbjct: 114 GRDYMAAGLYDRAEDMFNQLTDETDFRIGALQQLLQIYQA-----TSEWQKAIDVAERLV 168

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR-- 179
                                        D++  ++   +   +  ++  S  +  A   
Sbjct: 169 KL-------------------------GKDKQRVEIA-HFYCELALQHMASDDLDRAMTL 202

Query: 180 -FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
                   N  A   + +GR ++ +GEY  A+   Q V++   D E   E +  L   Y 
Sbjct: 203 LKKGAAADNNSARVSIMMGRVFMAKGEYAKAVESLQRVIS--QDRELVSETLEMLQTCYQ 260

Query: 239 ALALMDE 245
            L    E
Sbjct: 261 QLGKTAE 267


>gi|78186368|ref|YP_374411.1| TPR repeat-containing protein [Chlorobium luteolum DSM 273]
 gi|78166270|gb|ABB23368.1| TPR repeat [Chlorobium luteolum DSM 273]
          Length = 230

 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/155 (11%), Positives = 44/155 (28%), Gaps = 51/155 (32%)

Query: 68  LKEQNFSKAYEYFNQ------CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA------- 114
               +F +A +   +       +  +        + L+ A   Y+ GK + A        
Sbjct: 71  FDRGDFQRAIDGTEKEPGLKTIAEQYNGTPSGEMAELLLANAYYAIGKPKDALKAFDAAS 130

Query: 115 -------------------------SLGEEYITQYPESKNVD----YVYYLVGMSYAQMI 145
                                    +  + +++    S+  +       YL+  +     
Sbjct: 131 PVSPDLAAAAIAGKASCQSDLQQYDAAAKSFLS---ASEKAENNALKAQYLMAAA----- 182

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
            D       T+   +   ++V+RY  S   + A+ 
Sbjct: 183 -DCRLGAGDTEKAGELFGQVVDRYPGSSGARAAQQ 216


>gi|116626285|ref|YP_828441.1| hypothetical protein Acid_7245 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116229447|gb|ABJ88156.1| hypothetical protein Acid_7245 [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 554

 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 21/58 (36%), Gaps = 2/58 (3%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +Y      L  + + +A  YF++       +  A  +L   A+     GK  +  +  
Sbjct: 187 LYSSGQSALDNRQWDQALGYFSEVVTRN--SPRADGALYWKAYALGKLGKRDEGLAAI 242


>gi|312373067|gb|EFR20893.1| hypothetical protein AND_18345 [Anopheles darlingi]
          Length = 501

 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 26/66 (39%), Gaps = 1/66 (1%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           KA   ++ + +++A +                + L++     Y  G+Y+ A +  +    
Sbjct: 204 KAHANIQARKYTEAIQTLRSIEATTALRNY-HQLLVLIGECYYHNGEYENAYNALKRAHG 262

Query: 123 QYPESK 128
             P+S+
Sbjct: 263 MNPQSR 268


>gi|308235972|ref|NP_001184114.1| lysine-specific demethylase 6A isoform 1 [Canis lupus familiaris]
          Length = 1419

 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 38/141 (26%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 107 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFHWAIKAF 153

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QL------------AAKEVEIGR 198
             ++    +    K     + +               QL            A  +  I  
Sbjct: 154 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 213

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 214 LYETQRKYHSAKEAYEQLLQT 234


>gi|308235931|ref|NP_001184115.1| lysine-specific demethylase 6A isoform 2 [Canis lupus familiaris]
          Length = 1367

 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 38/141 (26%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 107 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFHWAIKAF 153

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QL------------AAKEVEIGR 198
             ++    +    K     + +               QL            A  +  I  
Sbjct: 154 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 213

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 214 LYETQRKYHSAKEAYEQLLQT 234


>gi|46519057|gb|AAS99868.1| ubiquitously transcribed X chromosome tetratricopeptide repeat
           protein variant 2 [Canis lupus familiaris]
          Length = 1367

 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 38/141 (26%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 107 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFHWAIKAF 153

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QL------------AAKEVEIGR 198
             ++    +    K     + +               QL            A  +  I  
Sbjct: 154 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDSNPCTLSNAEIQFHIAH 213

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 214 LYETQRKYHSAKEAYEQLLQT 234


>gi|46519055|gb|AAS99867.1| ubiquitously transcribed X chromosome tetratricopeptide repeat
           protein variant 1 [Canis lupus familiaris]
          Length = 1419

 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 38/141 (26%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 107 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFHWAIKAF 153

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QL------------AAKEVEIGR 198
             ++    +    K     + +               QL            A  +  I  
Sbjct: 154 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 213

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 214 LYETQRKYHSAKEAYEQLLQT 234


>gi|304382434|ref|ZP_07364933.1| hypothetical protein HMPREF0658_0387 [Prevotella marshii DSM 16973]
 gi|304336442|gb|EFM02679.1| hypothetical protein HMPREF0658_0387 [Prevotella marshii DSM 16973]
          Length = 374

 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/141 (10%), Positives = 39/141 (27%), Gaps = 26/141 (18%)

Query: 61  YEKAVLFLKEQNFSKAYEY-----FNQCSRDFPFAGVARKSLLMSAFVQY---SAGKYQ- 111
           Y  A    + +++  A               +     A  + + S          G  + 
Sbjct: 110 YNGAQHDKEFEDYEYAMRSTDPMVLQSYLDRY---KDAPTAHIDSIQAHLALIKLGDQEW 166

Query: 112 ------QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
                  +    + Y+ + PES +               I  + +D    K   +   + 
Sbjct: 167 TDAVISNSKEALQAYLAKNPESPHKAEAL--------DKIDAIDWDIAGKKNTKEGYHQY 218

Query: 166 VERYTNSPYVKGARFYVTVGR 186
           +  + +  +V  A+  +   +
Sbjct: 219 ITDHPDGKFVVEAQAALDKVK 239


>gi|262193701|ref|YP_003264910.1| lytic transglycosylase catalytic [Haliangium ochraceum DSM 14365]
 gi|262077048|gb|ACY13017.1| Lytic transglycosylase catalytic [Haliangium ochraceum DSM 14365]
          Length = 730

 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 32/70 (45%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           R    ++  A    +     +A +++ + + ++P    A ++  ++ ++ ++ G Y  A 
Sbjct: 273 RAAMAMFHGARALSRADRDREAIDWYQRVAAEYPRTIWAAEAQFLAGWLAFNLGDYDAAI 332

Query: 115 SLGEEYITQY 124
            L E  + +Y
Sbjct: 333 PLLERTLDRY 342


>gi|167648281|ref|YP_001685944.1| tetratricopeptide TPR_4 [Caulobacter sp. K31]
 gi|167350711|gb|ABZ73446.1| Tetratricopeptide TPR_4 [Caulobacter sp. K31]
          Length = 520

 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 21/156 (13%), Positives = 47/156 (30%), Gaps = 16/156 (10%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +    L     +A        +     + + S  D      +  +A      Q++  A +
Sbjct: 1   MRSLVLATALLVATLSAPAGVQARGLPLSVTSPVDQDTMSAL-AEAQADFAAQDYVSASK 59

Query: 79  YFNQCSRDFPFAGVARKSL----LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
             ++ +R   F   +        LM A        +  A +  ++     PE+   D+  
Sbjct: 60  VLDRLTRSARFKDNSSAVQRAVWLMLASSASQTQDWPAARAAIDQATAL-PEANEDDW-- 116

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
               ++      D+      T   L  ++ I  R+ 
Sbjct: 117 ----LARY----DIARGGGDTAETLHSLAVIARRFP 144


>gi|88603649|ref|YP_503827.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
 gi|88189111|gb|ABD42108.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
          Length = 436

 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 61/199 (30%), Gaps = 40/199 (20%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           +    ++      +K   +  A ++F +C +  P       + L+         ++ +A 
Sbjct: 190 QDPDLLFSMGRALMKIGGYHSAIQFFKKCLKIRP--DYTA-AWLLLGNSYKVLNQFDEAI 246

Query: 115 SLGEEYITQYPES----KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
              EE +   P S    K +  VY ++G       ++  Y +   +  ++Y  + +    
Sbjct: 247 DAYEEAMELDPGSTKYRKYIADVYLVMG-------KEALYKEGKPQEAIEYFDKTIR--- 296

Query: 171 NSPYVKGARFYVTVGRNQLAAKE---VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
                             +A         G  Y K G Y  A   F  V+       HA 
Sbjct: 297 -----------------MIANHITAWFSKGVAYKKLGAYRNATACFLKVVEMDPQNGHAY 339

Query: 228 EAMARLVEAYVALALMDEA 246
                + +        +EA
Sbjct: 340 ---YEMAQILEKTGNNEEA 355


>gi|118349830|ref|XP_001008196.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89289963|gb|EAR87951.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 260

 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 12/113 (10%)

Query: 62  EKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           E+A  + K   +S A +++      D      A K +   A   +   +  QA     E 
Sbjct: 40  EQADKYFKLHQYSNAVDFYKEALKYDDHTKSQADKIIKNMALAYFQMNQIDQAIQCYMEL 99

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
             +YP  +N+      VG+ Y +         ++ +  L+    ++E+  N+ 
Sbjct: 100 QEKYPNDQNIQIA---VGLIYGKS--------QSPEKALKVFEEVLEKDPNNR 141


>gi|89899174|ref|YP_521645.1| hypothetical protein Rfer_0360 [Rhodoferax ferrireducens T118]
 gi|89343911|gb|ABD68114.1| Tetratricopeptide TPR_2 [Rhodoferax ferrireducens T118]
          Length = 160

 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 41/121 (33%), Gaps = 6/121 (4%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +   +L       V         S       + T    Q   +E  V  ++ ++F +A  
Sbjct: 1   MKNESLWTVVLATVLAPAVMAAGSPSTSSRPAPTRQAAQPSDFELGVKAVQARDFERALP 60

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK-NVDYV--YY 135
            F + +R  P    A        F Q     + Q+ +  ++ +   P  +  ++Y+   Y
Sbjct: 61  LFEKVTRAEPRNADAWNY---LGFSQRQLRHFDQSLAAYQKALALNPNHRGAIEYLGELY 117

Query: 136 L 136
           L
Sbjct: 118 L 118


>gi|29347085|ref|NP_810588.1| hypothetical protein BT_1675 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29338983|gb|AAO76782.1| conserved protein, with a conserved TPR domain [Bacteroides
           thetaiotaomicron VPI-5482]
          Length = 734

 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 40/107 (37%), Gaps = 17/107 (15%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSR----DFPFAGVARKSLLMSAFVQYSAGKYQ 111
            +  ++  A  +LK++ +++A E + +           A   +K      +    + KY 
Sbjct: 497 SEDILFPIADFYLKKERWNEAIEVYEEMETIGALQERGAEYYQK----LGYALQKSKKYA 552

Query: 112 QAASLGEEYITQYP----ESKNVDYVY-----YLVGMSYAQMIRDVP 149
           +A     +  T  P     ++++   Y     Y   +SY + + +  
Sbjct: 553 EAIGAYLKADTLKPDNIWNNRHLAICYRLNRNYQAALSYYKKVEEAT 599


>gi|310820331|ref|YP_003952689.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309393403|gb|ADO70862.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1]
          Length = 350

 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 39/112 (34%), Gaps = 18/112 (16%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            K ++ L+     +A ++F +  R   F     ++     F+    G Y +A    +  +
Sbjct: 67  NKGLISLQAGKKEEAKKHFIKALR---FNQEQAQAYQNLGFIYLEEGAYGKAHDNFQRAL 123

Query: 122 TQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
              P     DY    Y +G++  +M +         +   +    I+    N
Sbjct: 124 KVNP-----DYLEARYNLGLTLMKMEKG--------EEAKKEFRTILAVNPN 162


>gi|299132070|ref|ZP_07025265.1| TPR repeat-containing protein [Afipia sp. 1NLS2]
 gi|298592207|gb|EFI52407.1| TPR repeat-containing protein [Afipia sp. 1NLS2]
          Length = 210

 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 25/70 (35%), Gaps = 7/70 (10%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLG 117
           +  +A + L+      A +  +   +  P +     R++ L      Y    Y +A    
Sbjct: 93  LMARASIALENNESDVALKLLDAIIKLRPDYTEAWNRRATL-----YYKKNDYNRAMEDI 147

Query: 118 EEYITQYPES 127
           EE + + P  
Sbjct: 148 EEVLRREPRH 157


>gi|281202386|gb|EFA76591.1| tetratricopeptide-like helical domain-containing protein
           [Polysphondylium pallidum PN500]
          Length = 352

 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 20/139 (14%), Positives = 45/139 (32%), Gaps = 22/139 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKS 96
                +   + SV       ++  +    L   +++ A E + +  +  P      A +S
Sbjct: 131 MSAKLKFFEIKSVEIKAAAEKLKVEGNSKLSGHDYNGAVECYTKAIQYDPTNAIYFANRS 190

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRA 154
              SAF      +Y++A       I + P      Y   Y+ +G +   +          
Sbjct: 191 ---SAFSNLK--QYEKAVEDANTAIERNPS-----YGKAYFRLGSANMSL--------GK 232

Query: 155 TKLMLQYMSRIVERYTNSP 173
            +  +    + +E   N+ 
Sbjct: 233 IQEAVDAYKKAIELEPNNE 251


>gi|224128732|ref|XP_002320408.1| predicted protein [Populus trichocarpa]
 gi|222861181|gb|EEE98723.1| predicted protein [Populus trichocarpa]
          Length = 488

 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/138 (13%), Positives = 40/138 (28%), Gaps = 22/138 (15%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCS---RDFPFAGVARKSLLMSAFVQYSA 107
           ++V    E+   A    K   + +A + +         +  +   A ++     F     
Sbjct: 9   SNVSRAEEIKVLANEAFKAHKYGQAIDLYSQAIELNGDNAVY--WANRA-----FAHSKL 61

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +Y  A     +     P+     ++    G +Y  M           K  L+   ++ +
Sbjct: 62  EEYGSAIQDASKATEIDPKYSKAKHICLERGAAYLAM--------GKFKDALKDFQQVKK 113

Query: 168 RYTNSPYVKGARFYVTVG 185
              N P    A   +   
Sbjct: 114 ICPNDP---DASKKLKEC 128


>gi|254427208|ref|ZP_05040915.1| tetratricopeptide repeat domain protein [Alcanivorax sp. DG881]
 gi|196193377|gb|EDX88336.1| tetratricopeptide repeat domain protein [Alcanivorax sp. DG881]
          Length = 633

 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 40/112 (35%), Gaps = 9/112 (8%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
              +  LK+ N   A     Q   D PF+     +LL      Y AG  ++A  L  E +
Sbjct: 232 ASGLTELKDGNLENARADLRQVRSDGPFS---EDALLALGLANYRAGDVKRALPLWLEAV 288

Query: 122 TQYPESKNVDYVYYLVGMSYAQM------IRDVPYDQRATKLMLQYMSRIVE 167
            +     +V     L   +Y ++      +    Y     +  L+ + R ++
Sbjct: 289 RRNSSHPSVQEALMLAPRAYEELGGLPQALSGYQYAATQYREALKDIQRAID 340


>gi|163786251|ref|ZP_02180699.1| hypothetical protein FBALC1_13737 [Flavobacteriales bacterium
           ALC-1]
 gi|159878111|gb|EDP72167.1| hypothetical protein FBALC1_13737 [Flavobacteriales bacterium
           ALC-1]
          Length = 885

 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 33/81 (40%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
            + S ++  L +  D  Y   +Y     +LK+++F  A  +F +C        V+ ++L 
Sbjct: 77  SKMSYKNKELINEVDKEYVGAIYRVGYFYLKKRDFKSAILFFEKCIEIDINKRVSGQALC 136

Query: 99  MSAFVQYSAGKYQQAASLGEE 119
                 +    Y ++ +  + 
Sbjct: 137 EIGKCYFELNDYYRSINYYKR 157


>gi|147920898|ref|YP_685295.1| O-linked GlcNAc transferase [uncultured methanogenic archaeon RC-I]
 gi|110620691|emb|CAJ35969.1| predicted O-linked GlcNAc transferase [uncultured methanogenic
           archaeon RC-I]
          Length = 368

 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 39/109 (35%), Gaps = 14/109 (12%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           K  L L  + + +A   F + +   P   ++  + L   + Q    + ++A     + I 
Sbjct: 227 KGRLMLLSEKYEEAAGAFRKAAEIAP--DLS-DAWLYQGWAQEMQERAEEAIEAYSKAIE 283

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
             P +      +Y+ G+   +M +            ++     +E Y +
Sbjct: 284 LNPGNH---MAWYMKGVLLGRMEK--------YDAAVECFDAAIEIYPD 321


>gi|59712363|ref|YP_205139.1| hypothetical protein VF_1756 [Vibrio fischeri ES114]
 gi|59480464|gb|AAW86251.1| conserved protein [Vibrio fischeri ES114]
          Length = 389

 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 57/179 (31%), Gaps = 30/179 (16%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A  ++      +A + F Q   +         +LL    +     +++QA       +  
Sbjct: 114 AKDYMVSGILDRAEKIFEQLLEE---PDHREAALLQLVAIHQQTREWEQAIQFANSLVRM 170

Query: 124 YPESKNVDYVYYLVGMSYAQMIR-DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
             +   +D  +Y   ++  ++   ++   ++  K  L   ++ V           A   +
Sbjct: 171 GRKKLKLDIAHYYCELAMQELADENLNKAKQNLKKALSSDNQCVR----------ASIMM 220

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
                             ++   Y +A+   + VL    D +   EA+  L E Y  L 
Sbjct: 221 AKLL--------------MEEENYKSALAHLESVLD--QDIDFVSEALPLLAECYEKLD 263


>gi|304411848|ref|ZP_07393459.1| Tetratricopeptide TPR_1 repeat-containing protein [Shewanella
           baltica OS183]
 gi|307303384|ref|ZP_07583139.1| TPR repeat-containing protein [Shewanella baltica BA175]
 gi|304349708|gb|EFM14115.1| Tetratricopeptide TPR_1 repeat-containing protein [Shewanella
           baltica OS183]
 gi|306913744|gb|EFN44166.1| TPR repeat-containing protein [Shewanella baltica BA175]
          Length = 694

 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 34/100 (34%), Gaps = 19/100 (19%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTD--VRYQREVYEKAVLFLKEQNFSKAYEY 79
            A   F ++    L+    Q +     D+  D   +   +   +A+   + Q+++ A + 
Sbjct: 324 VASVGFATLIGGLLLAAAPQPAHANVWDNAWDNVWKTPDQ---QAMQAYQSQDYANAAKQ 380

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           F                       QY AG Y+QA    E+
Sbjct: 381 FESPQWR--------------GSAQYKAGDYEQALKTFEQ 406



 Score = 35.5 bits (81), Expect = 8.5,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 22/65 (33%), Gaps = 7/65 (10%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN-QCSRD--FPFAGVARKS 96
           +    +  L +       + +Y +    ++     KA E +     +   FP    A K+
Sbjct: 393 KAGDYEQALKTFEQDSSAQGLYNQGNALMQLGKPDKAKERYQAALEKQADFP----AAKA 448

Query: 97  LLMSA 101
            L  A
Sbjct: 449 NLELA 453


>gi|217967766|ref|YP_002353272.1| TPR repeat-containing protein [Dictyoglomus turgidum DSM 6724]
 gi|217336865|gb|ACK42658.1| TPR repeat-containing protein [Dictyoglomus turgidum DSM 6724]
          Length = 870

 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 51/135 (37%), Gaps = 26/135 (19%)

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
            +  G +++A  + E  ++  P  KN+    + +G+   ++               +Y+ 
Sbjct: 666 YFQEGDFEKAKEIYERLLSINPNDKNI---LFNLGLVMYRL--------GDLNKAEEYLL 714

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAA----KEVEI-GRYYLKRG-------EYVAAIP 211
           + +       Y   A   + V   QL      KE++I  R Y++RG       +Y +A  
Sbjct: 715 KSLNIDPT--YSN-ALELLRVIYKQLGKEDKLKEIKIDERVYIQRGLEAYKNKDYNSAFD 771

Query: 212 RFQLVLANYSDAEHA 226
            F+  L    ++   
Sbjct: 772 YFKKALELKPNSPEI 786


>gi|170077429|ref|YP_001734067.1| serine/threonine kinase [Synechococcus sp. PCC 7002]
 gi|169885098|gb|ACA98811.1| serine/threonine kinase [Synechococcus sp. PCC 7002]
          Length = 714

 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 40/110 (36%), Gaps = 14/110 (12%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            KA + L+ +    A        R          +     ++ ++  +Y +A +  ++ +
Sbjct: 437 TKARIHLRREETDAALNSLGALLRLDSQQVW---AWFEKGWIHHNRAEYNEAIAAYQQAL 493

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
               ++ N+   +Y  G SY+++ R         +       R+VE   +
Sbjct: 494 KLDDQNANI---WYQQGNSYSKLQR--------YREAKNAYVRVVELEPD 532


>gi|81097720|gb|AAI09401.1| Zgc:123010 [Danio rerio]
          Length = 343

 Score = 37.0 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 46/148 (31%), Gaps = 29/148 (19%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQC-----SRDFPFAGVARKSLL 98
           +V   S    +    + EK + F++E  +++A   F            F F         
Sbjct: 172 EVIGFSEAKTKRSASLVEKGIRFVQEGQYTQAVSLFTEAIKCDPKDYRF-FG-------- 222

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
             ++      +Y  A +  E+ I   P+       YY  G +   + R            
Sbjct: 223 NRSYCYCCLEQYALALADAEKSIQMAPDWPKG---YYRRGSALMGLKRYS--------EA 271

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGR 186
            + M ++++   +      A   +   +
Sbjct: 272 EKAMEQVLKLDGDCE---EAVNDLLYCK 296


>gi|307132466|ref|YP_003884482.1| TPR repeat protein [Dickeya dadantii 3937]
 gi|306529995|gb|ADM99925.1| TPR repeat protein [Dickeya dadantii 3937]
          Length = 642

 Score = 37.0 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 16/135 (11%), Positives = 54/135 (40%), Gaps = 8/135 (5%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA------GVARKSL 97
           ++        V+  R+++ + V   ++    +A + +NQ   +F  +       +  K++
Sbjct: 228 QEDKGPHAPSVKKARDLFNQGVSLGQQGKSDQAIQIYNQLITEFQDSDDPILQELVAKAM 287

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
               F     G+   A    +  IT++ ++ +   +   +  +      ++   Q  +  
Sbjct: 288 GNKGFRLGKKGELSDAIQTYDRLITRF-KNSDSPVILQWIATAMLNKAINIGQ-QGQSDE 345

Query: 158 MLQYMSRIVERYTNS 172
            +Q   ++++++ +S
Sbjct: 346 EIQAYDQLIDKFKDS 360


>gi|255745754|ref|ZP_05419702.1| GGDEF family protein [Vibrio cholera CIRS 101]
 gi|255736829|gb|EET92226.1| GGDEF family protein [Vibrio cholera CIRS 101]
          Length = 648

 Score = 37.0 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 72/212 (33%), Gaps = 32/212 (15%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQ-CSRDFPFAG--VARKSLLMS 100
           D+ L  + D      +Y    L +     +  A +Y N+            +  +     
Sbjct: 196 DLLLSLLPDYVDPSGIYNDVGLLMGTLGQYESALDYLNKALEYRLEQGNPLLIAQVEHSL 255

Query: 101 AFVQYSAGKYQQAASLGEEYITQY--PES--KNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
               +  G+Y+++    E+    +  P +    + YV+  +G +Y ++   V  DQ    
Sbjct: 256 GDTYFKQGRYEESILYFEQ-AKAHLTPANYLFGLAYVHLGLGKAYIELNNFVEGDQ-HLF 313

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             L+Y++          +       +      LA        +  K  +Y  AI      
Sbjct: 314 QALEYVN---------QHKDQHLQGLIYL--SLAQ-----AHF--KEQKYAQAIDYANQA 355

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           +A  S++           +AY+ LA + EA +
Sbjct: 356 VA-ISESASLPR---IKAQAYLQLAKIAEAEQ 383


>gi|261415270|ref|YP_003248953.1| TPR repeat-containing protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261371726|gb|ACX74471.1| TPR repeat-containing protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302327749|gb|ADL26950.1| putative BatE protein [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 256

 Score = 37.0 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 32/112 (28%), Gaps = 16/112 (14%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +  F   I    A   L      + +   LD+ T                 E +F +A +
Sbjct: 1   MKNFKQIILTIAAALILTSAASAADKCNGLDAGT-------------KAYNENDFERAID 47

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
            +  C  +     V            Y +GK   A    +  +  +P   ++
Sbjct: 48  EWRTCVDE---GIVNADLYYNLGNAYYRSGKLGFAIFYYKSALRLHPSDDDI 96


>gi|124024552|ref|YP_001018859.1| hypothetical protein P9303_28641 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964838|gb|ABM79594.1| Hypothetical protein P9303_28641 [Prochlorococcus marinus str. MIT
           9303]
          Length = 581

 Score = 37.0 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 36/90 (40%), Gaps = 10/90 (11%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           + ++    Y + +  L+ +++  A   +N+  R         +  L    V  + G YQ+
Sbjct: 425 NPQHSDAYYNRGIAKLESKDYQGAIADYNKAIRI---GTQNARIYLNRGLVYDNLGDYQR 481

Query: 113 AASLGEEYITQYPESKNVDYVY-YL-VGMS 140
           A +   + I   P+     Y   Y+  G++
Sbjct: 482 AIADYNKAIELDPQ-----YALAYVNRGLA 506


>gi|13324598|gb|AAK18802.1|AF305610_1 LMP1 [Borrelia burgdorferi]
          Length = 1179

 Score = 37.0 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 3/62 (4%)

Query: 60   VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            +Y KA + LK +N+  A   ++      P       + +  A     +G   QA S  E+
Sbjct: 1008 LYLKASINLKNENYPNAISLYSSVIEKNPEN---TSAYINLAKAYEKSGNKAQAISTLEK 1064

Query: 120  YI 121
             I
Sbjct: 1065 II 1066



 Score = 35.5 bits (81), Expect = 7.2,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 61/182 (33%), Gaps = 34/182 (18%)

Query: 96   SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
            ++   +  ++   K +++  +  + I   P  +  +Y  YL      +            
Sbjct: 973  AIYNLSIAKFENNKLEESLEIINKAINLNP--EKSEY-LYLKASINLKNENYPN------ 1023

Query: 156  KLMLQYMSRIVERYTN--SPYVKGARFYVTVGRNQLAAKEVE-------------IGRYY 200
               +   S ++E+     S Y+  A+ Y   G    A   +E             +G  Y
Sbjct: 1024 --AISLYSSVIEKNPENTSAYINLAKAYEKSGNKAQAISTLEKIINKNNKLALNNLGILY 1081

Query: 201  LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS---LIQERY 257
             K+  Y  AI  F+  + N        EA   L    + +     A++++     ++   
Sbjct: 1082 KKQKNYQKAIEIFEKAIKN-----SDIEAKYNLATTLIEINDNTRAKDLLKEYTKLKPNN 1136

Query: 258  PQ 259
            P+
Sbjct: 1137 PE 1138


>gi|42525946|ref|NP_971044.1| TPR domain-containing protein [Treponema denticola ATCC 35405]
 gi|41815996|gb|AAS10925.1| TPR domain protein [Treponema denticola ATCC 35405]
          Length = 338

 Score = 37.0 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 45/130 (34%), Gaps = 15/130 (11%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYE-KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
            + ++RD           Q E +        ++++ ++A  Y+ +     P       + 
Sbjct: 21  CKTTNRDTTDTEKKQNYSQAEYFNIAGNTAKEKKDGTRAIYYYTKAIEADP--AYIE-AY 77

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
           L    + Y   ++++A +  +  I   P+    D  YY  G+        +  D      
Sbjct: 78  LNRGEMYYYVNEHEKALADFDRIIELNPKE---DKAYYFKGL--------LFNDAGNYNK 126

Query: 158 MLQYMSRIVE 167
            ++ ++  + 
Sbjct: 127 AIENLNTAIN 136


>gi|116622674|ref|YP_824830.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116225836|gb|ABJ84545.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 389

 Score = 37.0 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 20/37 (54%)

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           +++L+   F  +   +Y +A +  ++ I Q P + ++
Sbjct: 18  QQNLIEEGFSHFYNLEYDEAIASFDKAIAQNPSNPDI 54


>gi|297800644|ref|XP_002868206.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297314042|gb|EFH44465.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 2149

 Score = 37.0 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 8/54 (14%), Positives = 21/54 (38%), Gaps = 11/54 (20%)

Query: 82  QCSRDFP---FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY--PESKNV 130
           +     P   ++    K  +M  F        ++   L + Y+ ++  P ++N+
Sbjct: 890 KVETRHPIRLYSRYVDKVHIMLKFTH------EEVRDLIQRYLREHPDPNNENM 937


>gi|209523063|ref|ZP_03271620.1| hypothetical protein AmaxDRAFT_0437 [Arthrospira maxima CS-328]
 gi|209496650|gb|EDZ96948.1| hypothetical protein AmaxDRAFT_0437 [Arthrospira maxima CS-328]
          Length = 89

 Score = 37.0 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 29/77 (37%), Gaps = 3/77 (3%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           SS D   + +       E+    +  +K++ + +A       +   P   V  K+ +   
Sbjct: 2   SSTDRSKEELNPDLNSLEL---GLAAIKQKQYQQAIALLEPIADSQPHTKVGFKAQIGLV 58

Query: 102 FVQYSAGKYQQAASLGE 118
                +G+  +A SL +
Sbjct: 59  KAYDRSGQSDRAISLCQ 75


>gi|332283618|ref|YP_004415529.1| hypothetical protein PT7_0365 [Pusillimonas sp. T7-7]
 gi|330427571|gb|AEC18905.1| hypothetical protein PT7_0365 [Pusillimonas sp. T7-7]
          Length = 147

 Score = 37.0 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 36/114 (31%), Gaps = 26/114 (22%)

Query: 51  VTDVRYQREVYEK-------AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM---- 99
           +       E+YE+             E +F  A E + Q     P      +  L     
Sbjct: 1   MEPTELPDELYEQIESLSEAGNDCSDEGDFEGAIENWRQALALLP------EPQLDWEAA 54

Query: 100 ------SAFVQYSAGKYQQAASLGEEYITQY-PESKNVDYVYYLVGMSYAQMIR 146
                      Y + +++ A      +     P+ +   +++Y++G S  ++  
Sbjct: 55  TWLYASLGDAYYQSSEFEMAKDAL--FTALNCPDGQANPFIHYMLGKSLLRLND 106


>gi|151946817|gb|ABS19055.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 187 [Homo sapiens]
          Length = 1092

 Score = 37.0 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 38/141 (26%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y  A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSXALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|320354473|ref|YP_004195812.1| TPR repeat-containing protein [Desulfobulbus propionicus DSM 2032]
 gi|320122975|gb|ADW18521.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfobulbus
           propionicus DSM 2032]
          Length = 581

 Score = 37.0 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 40/208 (19%), Positives = 85/208 (40%), Gaps = 37/208 (17%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
           YL+   D    R +Y  A + L+++  ++A   +   S   P        LL+ A +  +
Sbjct: 113 YLEKHPDKTGMRMLY--AKVLLRQKKNAEAMRQYQLISDRHPDDP---AILLLLAEMYLN 167

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
           A + ++A  L E  + Q P      Y      +++  M R     Q   +  +++ ++ +
Sbjct: 168 ANQPERARPLLERILAQDP----AAY------LAHVLMARLCQL-QALPEEAIEHYTKAL 216

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
           E                  RN  +  ++E+G  Y+K G++  A+  ++ ++      E  
Sbjct: 217 E------------------RNWSSELQMELGELYVKAGQHDEAVRLYRDIIER---DEQN 255

Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQ 254
           E A   L+  Y+     D+A E ++ ++
Sbjct: 256 EGARVALIHVYLLQKKDDQALEELNRLK 283



 Score = 37.0 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 75/197 (38%), Gaps = 39/197 (19%)

Query: 67  FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
            L++++  +A E  N+      +A   ++  L  A +     KY +A ++ E+ + +   
Sbjct: 267 LLQKKD-DQALEELNRLKS---YAEQPQRVDLTIARLYAKQKKYDKAVAIVEKILHK--- 319

Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
            +N+    Y + + + Q        Q      L+ + +I             +  +   +
Sbjct: 320 -ENLSEARYFLAVLFVQ--------QEKYGRALRQVRQIDREAPEYLDALFLQVRILREQ 370

Query: 187 NQLAA-KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA-YVALALMD 244
           N+LA  K++          E++AA            D  +AE  M  L+ A Y  L   D
Sbjct: 371 NKLAEAKQLL--------EEHIAAA-----------DTRNAE--MYILLAALYQDLGRDD 409

Query: 245 EAREVVSLIQERYPQGY 261
            +++V+    E +P   
Sbjct: 410 LSKQVLLEGIEGFPNDE 426


>gi|253827496|ref|ZP_04870381.1| flagellar functional protein [Helicobacter canadensis MIT 98-5491]
 gi|253510902|gb|EES89561.1| flagellar functional protein [Helicobacter canadensis MIT 98-5491]
          Length = 797

 Score = 37.0 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 68/190 (35%), Gaps = 25/190 (13%)

Query: 65  VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG---KYQQAASLGEEYI 121
              LK  ++ +A +  N+  + +P     R  L M        G    Y++  SLG+ ++
Sbjct: 188 QNLLKRGSYQEALDSINEMLQIYPETIFKRDVLFMKLQALDEIGGEENYEEIISLGKAWL 247

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
           + YP   ++  V  L+  +Y +M           +    Y  RI + Y N          
Sbjct: 248 SAYPADIHIPEVLLLLAENYVKM--------NFFEEASYYYDRIFKEYKNDK--SELLAR 297

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
           ++ G+               +RG+    +  +Q VL    D E A  A   L E Y    
Sbjct: 298 LSYGQKI------------FERGDKKMPLELYQSVLNQTQDLEIASLAALLLGEYYREAG 345

Query: 242 LMDEAREVVS 251
               A+E + 
Sbjct: 346 DKQRAQEYLK 355



 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 39/110 (35%), Gaps = 11/110 (10%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           + + +  L  ++ +++ Y  + + +   F      +++  +E            Y   I 
Sbjct: 193 RGSYQEALDSINEMLQIYPETIFKRDVLFMKLQALDEIGGEE-----------NYEEIIS 241

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             +  L+ Y    H  E +  L E YV +   +EA      I + Y    
Sbjct: 242 LGKAWLSAYPADIHIPEVLLLLAENYVKMNFFEEASYYYDRIFKEYKNDK 291


>gi|226325486|ref|ZP_03801004.1| hypothetical protein COPCOM_03291 [Coprococcus comes ATCC 27758]
 gi|225206229|gb|EEG88583.1| hypothetical protein COPCOM_03291 [Coprococcus comes ATCC 27758]
          Length = 456

 Score = 37.0 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 27/72 (37%), Gaps = 3/72 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSR-DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           +Y  A   ++  N+  A     +  + D  ++      LL  A+     G    A S  E
Sbjct: 359 LYSTAQYEVQSGNYDDAISDLEKIQKMDDSYSDGGVYKLLGDAYA--GKGDKDNAKSNYE 416

Query: 119 EYITQYPESKNV 130
           +  T YP ++  
Sbjct: 417 KAATDYPGTQAA 428


>gi|224532842|ref|ZP_03673457.1| TPR domain protein [Borrelia burgdorferi WI91-23]
 gi|224512231|gb|EEF82617.1| TPR domain protein [Borrelia burgdorferi WI91-23]
          Length = 379

 Score = 37.0 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 72/212 (33%), Gaps = 36/212 (16%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           K+ N+ KA  Y+ +C    P       +L        +   Y++A  + EEY+   PE+ 
Sbjct: 70  KKNNYDKAIVYYQKCLVKHPSNNY---ALFGLGDCYRNLDNYKKATDIWEEYLKYDPENI 126

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV--------KGARF 180
               V   V  SY ++        +  +   Q   +++E   ++ Y            + 
Sbjct: 127 T---VLTRVAASYRKL--------KNFQKSKQTYLKVMELMPDNDYALVGIGHLYYDFKE 175

Query: 181 YVTVGRNQLAAKEVE-----------IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
           Y    +  L   E+            IG  Y K  E+   I  F+  L     +     A
Sbjct: 176 YKEALKYWLKMYELNQSKVDVRVLTSIGNCYRKLREFTRGIYFFKKALEI---SPSNFYA 232

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +  L + Y       EA +    I E+ P+  
Sbjct: 233 VFGLADCYRGNKEYKEALKYWIDIIEKDPKNN 264


>gi|183221128|ref|YP_001839124.1| putative signal peptide [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189911219|ref|YP_001962774.1| hypothetical protein LBF_1689 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167775895|gb|ABZ94196.1| Hypothetical protein LBF_1689 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167779550|gb|ABZ97848.1| Conserved hypothetical protein; putative signal peptide [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 515

 Score = 37.0 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 22/161 (13%), Positives = 45/161 (27%), Gaps = 48/161 (29%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLL-----------------------MSAFVQYSA 107
               KA+   N+    FP +  A  + L                         A+  + +
Sbjct: 174 GEREKAFVKLNKAIDLFPGSHYAENASLLISFLEDGQKKKEELKSKKKSPEELAYSLFQS 233

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           G Y++     E        +       Y+   S  ++          T   ++   ++V+
Sbjct: 234 GDYEETLKTLESLPVL--TNDQS----YIKARSMEEL--------GKTSNAVKEYIQLVK 279

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
           +  N      A   +           + IG +Y +    VA
Sbjct: 280 QKENKEVAIRANRRL-----------LLIGNFYQENKSLVA 309


>gi|119486472|ref|ZP_01620530.1| kinesin light chain-like protein [Lyngbya sp. PCC 8106]
 gi|119456374|gb|EAW37505.1| kinesin light chain-like protein [Lyngbya sp. PCC 8106]
          Length = 1127

 Score = 37.0 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 59/180 (32%), Gaps = 29/180 (16%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWER-----------QSSRDVYLDSVTDVRYQREVYEKA 64
            Y + + +L  F  + V   VG               +S  + +    ++     + ++A
Sbjct: 58  LYPMKRTSLNPFLWLTV--FVGCSGLLTAIPPVIGQTNSAVLLVQQSDELEEANRLEQQA 115

Query: 65  VLFLKEQNFSKAY----EYFNQCSR----DFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           V   ++  +++A            R    + P   VA +SL   A +    G+Y +A  L
Sbjct: 116 VQLYQQGKYNEAIPILKRVLEIIERLLGENHP--DVA-QSLNNLAILYRDQGRYSEAEPL 172

Query: 117 GEEYITQY-----PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            +  +T Y         +V      +   Y    R    +    + +      + E + +
Sbjct: 173 FQRSLTIYEKALGENHPDVAQSLNNLAQLYYSQGRYSEAEPLHQRSLAIREKALGENHPD 232


>gi|157131465|ref|XP_001655859.1| hypothetical protein AaeL_AAEL012104 [Aedes aegypti]
 gi|108871530|gb|EAT35755.1| conserved hypothetical protein [Aedes aegypti]
          Length = 1326

 Score = 37.0 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 60/191 (31%), Gaps = 39/191 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA--FVQYSAGKYQQAASLGEE 119
             A  ++++ NF KA E         P      ++    A  ++ +   +     +  + 
Sbjct: 666 ATADFYMQQGNFVKAIELLKTIK---PNQQYYIQAKTKMAHFYLVHKKDR----LAYAQC 718

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           +                 G S   M+ D     +     ++   +  ++       + A 
Sbjct: 719 FRELVANCP---------GPSSYLMLGDAYMSIQEADEAIEAYRQAQKQNP-----RDA- 763

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                    LA+K   +GR Y+K  +Y  AI  +Q  +A              L E ++ 
Sbjct: 764 --------LLASK---LGRAYVKTHQYKKAISYYQEAIA----TPENSLLKLDLAELFLK 808

Query: 240 LALMDEAREVV 250
           L     A + +
Sbjct: 809 LKQYSNAEQTL 819


>gi|332707846|ref|ZP_08427868.1| hypothetical protein LYNGBM3L_58420 [Lyngbya majuscula 3L]
 gi|332353383|gb|EGJ32901.1| hypothetical protein LYNGBM3L_58420 [Lyngbya majuscula 3L]
          Length = 310

 Score = 37.0 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 54/153 (35%), Gaps = 32/153 (20%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
             G Y++A       I ++P      Y  Y        ++  V  +    +  ++   + 
Sbjct: 6   EMGDYEKAYQELNTQIHKFPGH----YELY-------NLLGAVASECEHFEKAIRAYQKA 54

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           ++   NS                +A   + +   Y K GE   A+  +Q+VL +    +H
Sbjct: 55  LKIRPNSD---------------VARHNLGLA--YRKNGEPEKALKEYQIVLNS---GKH 94

Query: 226 AEEAMARLVEAYVALALMDEAREVVS-LIQERY 257
           + + M  L + Y  L   ++A       ++  +
Sbjct: 95  SYQLMHNLGDTYFDLGHFEQAATYFRNALKHNF 127


>gi|271967342|ref|YP_003341538.1| hypothetical protein Sros_6063 [Streptosporangium roseum DSM 43021]
 gi|270510517|gb|ACZ88795.1| hypothetical protein Sros_6063 [Streptosporangium roseum DSM 43021]
          Length = 143

 Score = 37.0 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 15/101 (14%), Positives = 40/101 (39%), Gaps = 6/101 (5%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
              S     ++        + +++ +  L E + + A     + +   P +   R++   
Sbjct: 6   SGPSDSPSPETGAPAGDVYDWFQRGMKLLAEGSPAAAVALLERAADAEPESRSIREA--- 62

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
            A  Q+++ +Y +A      +I     +   DY Y+ +G++
Sbjct: 63  LARAQFNSRQYAEAVDSF-RWIVD--ANPAEDYAYFGLGLA 100


>gi|296083407|emb|CBI23360.3| unnamed protein product [Vitis vinifera]
          Length = 197

 Score = 37.0 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 9/83 (10%), Positives = 29/83 (34%), Gaps = 1/83 (1%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAF 102
             V  +        + +++       +  +S+A E+F    +   P      +  +  A 
Sbjct: 8   EKVAKEQAERRATAQLMFDLGQRAYGKGTYSRAIEFFEGALTIIPPPTLFGGEIQIWLAM 67

Query: 103 VQYSAGKYQQAASLGEEYITQYP 125
              +  ++    +L ++   ++P
Sbjct: 68  AYEANNRHADCIALYQQLERKHP 90


>gi|229122896|ref|ZP_04252104.1| TPR domain protein [Bacillus cereus 95/8201]
 gi|228660480|gb|EEL16112.1| TPR domain protein [Bacillus cereus 95/8201]
          Length = 304

 Score = 37.0 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 56/151 (37%), Gaps = 36/151 (23%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
             +++K++ + +A E F +     P    + ++    A   Y+ G+ ++A    E ++  
Sbjct: 75  GDIYMKQKKWEEAKEAFQKSISIQP----SDEAYHNVAVAHYNLGELEEA---SEFFLR- 126

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
              + + DY+ Y    SY + + D+       K  L   +R                   
Sbjct: 127 --AAGDSDYIMY----SYVKCLIDLGR-TTEAKEKLDAFNR------------------- 160

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
              N L   E+ +   Y++   Y  AI  F+
Sbjct: 161 ESDNFLG--EMMVADLYVELNCYKEAIEWFE 189


>gi|227828833|ref|YP_002830613.1| hypothetical protein M1425_2607 [Sulfolobus islandicus M.14.25]
 gi|238621025|ref|YP_002915851.1| Tetratricopeptide TPR_2 repeat protein [Sulfolobus islandicus
           M.16.4]
 gi|227460629|gb|ACP39315.1| Tetratricopeptide TPR_2 repeat protein [Sulfolobus islandicus
           M.14.25]
 gi|238382095|gb|ACR43183.1| Tetratricopeptide TPR_2 repeat protein [Sulfolobus islandicus
           M.16.4]
          Length = 302

 Score = 37.0 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 45/117 (38%), Gaps = 24/117 (20%)

Query: 63  KAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           K  +  + + +++A E +    +          K+L   A+  ++ GKY+QA    +  I
Sbjct: 149 KGDILFQLKKYNEAIEEYRTNLND--------DKNLYAIAYTYFTIGKYEQALEYYDRAI 200

Query: 122 TQYPESKNVDYVYYLVG--MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
              PE     Y Y      + + + I              + + + ++   ++PY+K
Sbjct: 201 GVNPEDP---YHYEGKARTLIFMEKIN----------EAYETIKKAIDIDPDNPYIK 244


>gi|187918082|ref|YP_001883645.1| mucin 2 precursor [Borrelia hermsii DAH]
 gi|119860930|gb|AAX16725.1| mucin 2 precursor [Borrelia hermsii DAH]
          Length = 605

 Score = 37.0 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 58/168 (34%), Gaps = 23/168 (13%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           Y + + +     +K +N+ +A +  ++  + +P     +      A       +  +A  
Sbjct: 37  YSQRLIKIGQEEIKNKNYLQAIKILSEAIQKYP---KVQNGYYFLAIAYRENNQLTEAEG 93

Query: 116 LGEEYITQYPESKNVDYVYY-LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
              + I       ++DY  Y  +G    +        +    L ++Y S  V+   N   
Sbjct: 94  ALLDGIAI---GGDIDYKLYFELGNIMFK------RGEGYYNLAIKYYSNSVKNMPNYDK 144

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
                       N+ A   VE G+   K  +Y  A   + + + +YS 
Sbjct: 145 A---------LLNR-ANSYVEQGKINFKEKDYKNAWDSYSMAIHDYSQ 182


>gi|308802594|ref|XP_003078610.1| COG0457: FOG: TPR repeat (ISS) [Ostreococcus tauri]
 gi|116057063|emb|CAL51490.1| COG0457: FOG: TPR repeat (ISS) [Ostreococcus tauri]
          Length = 1474

 Score = 37.0 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 44/158 (27%), Gaps = 39/158 (24%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA----ASLGEE 119
           A ++L + +  KA   F+   R  P + +            + +G +  A     +  + 
Sbjct: 625 ANIYLSQGHTEKAIALFDIAIRRDPVSAIGH---FNIGNAHFMSGDWASARTSYLAALDR 681

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
                    +     Y   +    M+ DV                 +         K   
Sbjct: 682 -------EPH-----YYKALYNLAMLLDVT--------------GFI------AEAKDTM 709

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
                 R         +G  Y+K G++  A  +F+  L
Sbjct: 710 KRAVEIRRSDVRGVYAMGLLYVKLGQWKKAEEQFKNAL 747


>gi|329847187|ref|ZP_08262215.1| transglutaminase-like superfamily protein [Asticcacaulis
           biprosthecum C19]
 gi|328842250|gb|EGF91819.1| transglutaminase-like superfamily protein [Asticcacaulis
           biprosthecum C19]
          Length = 1097

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 12/40 (30%), Gaps = 3/40 (7%)

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
            AFV +    Y  A       +   P         YL G+
Sbjct: 745 QAFVYWRRLDYPAAIDAVTRVLDINPADPA---ARYLRGL 781


>gi|85682784|gb|ABC73374.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 68 [Homo sapiens]
          Length = 1305

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYRSAKEAYEQLLQT 231


>gi|289163725|ref|YP_003453863.1| TPR repeat protein, weakly similar to eukaryotic proteins
           [Legionella longbeachae NSW150]
 gi|288856898|emb|CBJ10712.1| TPR repeat protein, weakly similar to eukaryotic proteins
           [Legionella longbeachae NSW150]
          Length = 1060

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 36/255 (14%), Positives = 78/255 (30%), Gaps = 52/255 (20%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
                +FF++    ++      S         D + Q  + ++ +    E+++ KA   +
Sbjct: 1   MLLRILFFAVLSLLVINSSPSYS--------LDSQAQSALPKEGLQAEMEKDWEKAISIY 52

Query: 81  NQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                  P       R + +      Y   KY  A    +  +   P +           
Sbjct: 53  TGLLLKKPDNIDLWLRVAQIE-----YHLKKYPLAIDAYKHALRIQPNN----------- 96

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN----------- 187
           ++  + + ++       K  L  ++  ++   ++     A+  +T               
Sbjct: 97  VTLHKDLSEIYAAANQPKEALIAINEAIKLSPDNVDYLLAKAKITNWNKQPAVALESYQK 156

Query: 188 --QLAAKE----------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
             QL   E          +EIGR   +   Y  AI  +  V+    D     E +    +
Sbjct: 157 ILQLGKSEKIKVNTKEILIEIGRLQTQLKNYPDAINSYNQVIFLNPDNPKLYEEL---AQ 213

Query: 236 AYVALALMDEAREVV 250
            Y A    D+A + +
Sbjct: 214 VYAAAKEPDKAIDTI 228


>gi|229541640|ref|ZP_04430700.1| Tetratricopeptide TPR_2 repeat protein [Bacillus coagulans 36D1]
 gi|229326060|gb|EEN91735.1| Tetratricopeptide TPR_2 repeat protein [Bacillus coagulans 36D1]
          Length = 565

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 35/83 (42%), Gaps = 8/83 (9%)

Query: 63  KAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +  L+L+ + + +A   +      S  +       ++            ++++AA+  E+
Sbjct: 434 QGDLYLERKKYKEAIRAYEAANQISHSY-GGEKTIEAYFNLGIAYVENQQFEKAAAAFEK 492

Query: 120 YITQYPESKN--VDYVYYLVGMS 140
               Y ++K   ++ +YY  GM+
Sbjct: 493 M--LYQKNKANPIELMYYHYGMA 513


>gi|167763146|ref|ZP_02435273.1| hypothetical protein BACSTE_01516 [Bacteroides stercoris ATCC
           43183]
 gi|167698440|gb|EDS15019.1| hypothetical protein BACSTE_01516 [Bacteroides stercoris ATCC
           43183]
          Length = 283

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 27/68 (39%), Gaps = 3/68 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +  +A ++++    + A   ++             ++LLM A++      Y+ A +  E 
Sbjct: 97  LLNRATIYMELGRNNLAQADYSLVLDL---EKDNEEALLMRAYIYMQQRDYKMAKADYER 153

Query: 120 YITQYPES 127
            +   P S
Sbjct: 154 LLKVNPTS 161


>gi|146101793|ref|XP_001469207.1| MAP kinase kinase-like protein; protein kinase [Leishmania
           infantum]
 gi|134073576|emb|CAM72310.1| MAP kinase kinase-like protein [Leishmania infantum JPCM5]
          Length = 1343

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 15/139 (10%), Positives = 44/139 (31%), Gaps = 33/139 (23%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEE 119
           E+     K   + +A  Y+ Q     P +      +S     F  ++  +++++A+   +
Sbjct: 49  EEGNEAFKAGRYHEAIRYYTQAIEVDPDSEFLYTNRS-----FAYFNIKEFEKSAADAAK 103

Query: 120 -------YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
                  +   +          Y +G++   +  D  +   + +               S
Sbjct: 104 AVEINANFFKGH----------YRLGLAQMSL-NDFGHAMESLRKAWALA-------P-S 144

Query: 173 PYVKGARFYVTVGRNQLAA 191
              +  R  +    +++A 
Sbjct: 145 ENKEAIRVAMAKCESKMAR 163


>gi|118577182|ref|YP_876925.1| TPR repeat protein [Cenarchaeum symbiosum A]
 gi|118195703|gb|ABK78621.1| TPR repeat protein [Cenarchaeum symbiosum A]
          Length = 206

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 9/73 (12%), Positives = 28/73 (38%), Gaps = 3/73 (4%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
             + ++A     ++ + +A  ++ +     P    A      + +     G +++A S  
Sbjct: 8   DSLLDEANQLFLKKRYDEAVHFYEEVLDTDPGNLSAIN---NAGYALSKTGSFEKALSYY 64

Query: 118 EEYITQYPESKNV 130
            + +  YP   ++
Sbjct: 65  GKGLELYPGDVSI 77


>gi|310642524|ref|YP_003947282.1| hypothetical protein PPSC2_c3081 [Paenibacillus polymyxa SC2]
 gi|309247474|gb|ADO57041.1| Hypothetical protein PPSC2_c3081 [Paenibacillus polymyxa SC2]
          Length = 210

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 11/88 (12%), Positives = 30/88 (34%), Gaps = 5/88 (5%)

Query: 38  WERQSSRDVYLDSVTDVRYQREV--YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
             R +      D       ++E+  + +   + +   + +A + F Q    FP +    +
Sbjct: 58  CLRAAGFSAEADMSDAELPEKELPAFNRGQGYYRLLMYPEAIQQFEQVLEHFPDS-W--Q 114

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           S +      +      +A S  ++ +  
Sbjct: 115 SRIYMGMAHFQLDDPAEAISQFQKVLHL 142


>gi|309791748|ref|ZP_07686238.1| Lytic transglycosylase catalytic [Oscillochloris trichoides DG6]
 gi|308226241|gb|EFO79979.1| Lytic transglycosylase catalytic [Oscillochloris trichoides DG6]
          Length = 787

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 22/53 (41%)

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           A   +Q   ANY D   A EA+ R  +    L     A  +   + ERYPQ  
Sbjct: 375 ASVAYQEYAANYPDDPRAPEALDRAAQLRERLGDSAGALAIQRTLGERYPQSS 427


>gi|294338857|emb|CAZ87191.1| putative Protein prenylyltransferase [Thiomonas sp. 3As]
          Length = 364

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 53/150 (35%), Gaps = 27/150 (18%)

Query: 42  SSRDVYLDSVTDVRYQREVYE--KAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSL 97
           SS    +D++   + +   Y+  K V+  +++  ++A + F   +  +P         ++
Sbjct: 37  SSALTQVDTLLTQKPKDPQYQFLKGVILTEQKKDAQAIKIFQSLTEQYPELPEPYNNLAV 96

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
           L   + Q   G+Y +A +  +  I   P         Y    +    I          KL
Sbjct: 97  L---YAQ--QGQYDKARAALDMAIRTNPS--------YATAQANLGDI--------YAKL 135

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
             Q   + ++   +      AR  + + R 
Sbjct: 136 ASQAYQKALQLAPD--ENASARVKLNLIRE 163


>gi|289207527|ref|YP_003459593.1| hypothetical protein TK90_0342 [Thioalkalivibrio sp. K90mix]
 gi|288943158|gb|ADC70857.1| Tetratricopeptide TPR_2 repeat protein [Thioalkalivibrio sp.
           K90mix]
          Length = 582

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 61/206 (29%), Gaps = 65/206 (31%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
            A + L+ +  S A E F Q     P   +AR++ +  A +    G+Y  A       + 
Sbjct: 371 AARMTLEIEGESAARERFEQMQ-QGPDTELARRAYVGEANLLREKGEYTAARERLNRGLV 429

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
           Q+P    +    Y+ G+ + +            +        I++    +          
Sbjct: 430 QFPGDTRL---LYMRGLVHERQDD--------IEAAEADFRAILDNDPEN---------- 468

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY----- 237
                                   VAA+      LA+    +  EEA+  +  AY     
Sbjct: 469 ------------------------VAALNALGYTLAD--RTDRYEEALDLIERAYAQEPD 502

Query: 238 ------------VALALMDEAREVVS 251
                         L  +DEA + + 
Sbjct: 503 DAAIIDSYGWVLYRLGRLDEAEDFLR 528


>gi|289192214|ref|YP_003458155.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22]
 gi|288938664|gb|ADC69419.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22]
          Length = 635

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 24/66 (36%), Gaps = 1/66 (1%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
            V +  +  + +A EYF +     P      +  +      Y+   Y +A    ++ +  
Sbjct: 82  GVCYYSKGEYGRAIEYFEKALELCP-DEEKWRIWISLGDCYYNIRDYDKAIDYYKKALKM 140

Query: 124 YPESKN 129
            PE K 
Sbjct: 141 CPEDKK 146


>gi|238650408|ref|YP_002916260.1| Tol system periplasmic component [Rickettsia peacockii str. Rustic]
 gi|238624506|gb|ACR47212.1| Tol system periplasmic component [Rickettsia peacockii str. Rustic]
          Length = 245

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 18/46 (39%)

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
             A   Y   K  +A    + +I +YP S  +   Y+  G  + + 
Sbjct: 122 DLALAAYKDNKLTEAKDKFKNFIQKYPNSLLISNAYFWYGECFFKQ 167



 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 14/133 (10%), Positives = 45/133 (33%), Gaps = 12/133 (9%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ- 111
           D+   ++ Y+ A+   K+   ++A + F    + +P + +   +        +    Y  
Sbjct: 113 DIAPDKQAYDLALAAYKDNKLTEAKDKFKNFIQKYPNSLLISNAYFWYGECFFKQKDYNG 172

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            A +  + Y    P+          + +S  ++        + T+     +++  + +  
Sbjct: 173 AAVNYLKGYKEL-PKGAKSSDGLLKLALSLGEL--------KKTQEACNMLAKFDKEFPT 223

Query: 172 SPYVKGARFYVTV 184
           +     A   +  
Sbjct: 224 NR--TAASKKMAE 234


>gi|255038772|ref|YP_003089393.1| TPR repeat-containing protein [Dyadobacter fermentans DSM 18053]
 gi|254951528|gb|ACT96228.1| TPR repeat-containing protein [Dyadobacter fermentans DSM 18053]
          Length = 748

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 40/88 (45%), Gaps = 11/88 (12%)

Query: 94  RKSLLMSAFVQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
            ++L     +  +   +  +A +  E  +++YP+++  D +YYL+ +S          +Q
Sbjct: 570 EEALYNLGKIYRFDLKESNRAIAAFERVLSEYPKTEYKDEIYYLLFLSN---------EQ 620

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARF 180
            A +    + S+++  Y NS Y +    
Sbjct: 621 NAAQK-DSWKSKLLSEYPNSTYARLVNK 647


>gi|222481092|ref|YP_002567329.1| Tetratricopeptide TPR_2 repeat protein [Halorubrum lacusprofundi
           ATCC 49239]
 gi|222453994|gb|ACM58259.1| Tetratricopeptide TPR_2 repeat protein [Halorubrum lacusprofundi
           ATCC 49239]
          Length = 301

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 27/76 (35%), Gaps = 5/76 (6%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
            A   L+E  + +A   + +  R    +  A  +    A+  + +G+ +QA    E  + 
Sbjct: 109 AAHAELEE--YDQAIGAYEEALRIDGDSEHAATAETNLAYALWESGRGEQALEHAERAVE 166

Query: 123 QYPESKNVDYVYYLVG 138
                      +Y  G
Sbjct: 167 I---DPRFAEAWYNRG 179


>gi|149179248|ref|ZP_01857813.1| TPR repeat protein [Planctomyces maris DSM 8797]
 gi|148841927|gb|EDL56325.1| TPR repeat protein [Planctomyces maris DSM 8797]
          Length = 609

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 16/138 (11%), Positives = 43/138 (31%), Gaps = 21/138 (15%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKY 110
           + +Y    +    ++    +  KA E +    +  P   +      L+        AG+ 
Sbjct: 486 NPQYAPAYFTLGRIWESRGDLDKARELYEATLQHAPGFDSAWYNLGLIDL-----KAGRQ 540

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
            +A +  +  +   P   +    +  +G+ Y          Q+       +    +    
Sbjct: 541 PEAIAAFQRALEINPRHAS---AHNNLGVIYLF--------QQNFSQAKFHFEEALHIDP 589

Query: 171 NSPYVKGARFYVTVGRNQ 188
               +K A+  +   ++Q
Sbjct: 590 E---LKQAKQGLEYMKSQ 604


>gi|170740913|ref|YP_001769568.1| TPR repeat-containing protein [Methylobacterium sp. 4-46]
 gi|168195187|gb|ACA17134.1| TPR repeat-containing protein [Methylobacterium sp. 4-46]
          Length = 292

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 76/234 (32%), Gaps = 43/234 (18%)

Query: 39  ERQSSRDVYLDSVTDV----RYQREVYE-KAVLFLKEQNFSKAYEYFNQCSRDFPF--AG 91
           ++  + DV + S+TDV          Y  +   + +  N+ +A   F +  +  P   + 
Sbjct: 47  DKTGAADVNIASLTDVIQRNPSDPAAYNTRGAAYARAGNYGEAIADFTKAVQLDPNSASA 106

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
            + ++L         +G+   A    +++        N    Y  +G +  Q        
Sbjct: 107 YSNRAL-----AYRQSGRNDAAL---QDFTRALTADPNYSAAY--IGRANLQ------RA 150

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY------------ 199
               +     +S+ +     S     AR    + R         IG +            
Sbjct: 151 MGNYEAAYSDLSQAIRLTPESAEAYHAR---GLVRQAQGQHRAAIGDFDAAIDRNPFVSA 207

Query: 200 -YLKRGEYVAAIPRFQLVLANYSDAEHA----EEAMARLVEAYVALALMDEARE 248
            Y  RG+ + A  ++   + +++ A +      ++ A    AY       EA E
Sbjct: 208 PYAARGQSLIATNQYDKAIEDFNAALNVNNKDADSWAYRGVAYEKSGRRQEAME 261


>gi|148733176|gb|ABR09246.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 66 [Homo sapiens]
          Length = 1377

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 38/141 (26%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++         K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPXFCRAKEIHLRLGLMFKVNTDXKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|283785422|ref|YP_003365287.1| tetratricopeptide repeat protein [Citrobacter rodentium ICC168]
 gi|282948876|emb|CBG88478.1| tetratricopeptide repeat protein [Citrobacter rodentium ICC168]
          Length = 389

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 66/183 (36%), Gaps = 30/183 (16%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              ++    + +A + FNQ + +  F   A +  L+  +   +   +Q+A  + E  +  
Sbjct: 114 GRDYMAAGLYDRAEDMFNQLTDETDFRVGALQ-QLLQIY--QATSDWQKAIEVAERLVKL 170

Query: 124 YPESKNVDYVYYLVGMSYAQMI-RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
             E + V+  ++   ++  QM   D+       K              NS          
Sbjct: 171 GKEKQRVEIAHFYCELALQQMAGDDLDRAMTLLKKGAAADK-------NS---------- 213

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
                  A   + +GR ++ +G+Y  A+   Q V++   D E   E +  L   Y  L  
Sbjct: 214 -------ARVSIMMGRVWMAKGDYAKAVESLQRVIS--QDKELVSETLEMLQTCYQQLGK 264

Query: 243 MDE 245
            +E
Sbjct: 265 NEE 267


>gi|224418169|ref|ZP_03656175.1| flagellar functional protein [Helicobacter canadensis MIT 98-5491]
 gi|313141704|ref|ZP_07803897.1| flagellar functional protein [Helicobacter canadensis MIT 98-5491]
 gi|313130735|gb|EFR48352.1| flagellar functional protein [Helicobacter canadensis MIT 98-5491]
          Length = 785

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 68/190 (35%), Gaps = 25/190 (13%)

Query: 65  VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG---KYQQAASLGEEYI 121
              LK  ++ +A +  N+  + +P     R  L M        G    Y++  SLG+ ++
Sbjct: 176 QNLLKRGSYQEALDSINEMLQIYPETIFKRDVLFMKLQALDEIGGEENYEEIISLGKAWL 235

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
           + YP   ++  V  L+  +Y +M           +    Y  RI + Y N          
Sbjct: 236 SAYPADIHIPEVLLLLAENYVKM--------NFFEEASYYYDRIFKEYKNDK--SELLAR 285

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
           ++ G+               +RG+    +  +Q VL    D E A  A   L E Y    
Sbjct: 286 LSYGQKI------------FERGDKKMPLELYQSVLNQTQDLEIASLAALLLGEYYREAG 333

Query: 242 LMDEAREVVS 251
               A+E + 
Sbjct: 334 DKQRAQEYLK 343



 Score = 36.2 bits (83), Expect = 5.5,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 39/110 (35%), Gaps = 11/110 (10%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           + + +  L  ++ +++ Y  + + +   F      +++  +E            Y   I 
Sbjct: 181 RGSYQEALDSINEMLQIYPETIFKRDVLFMKLQALDEIGGEE-----------NYEEIIS 229

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             +  L+ Y    H  E +  L E YV +   +EA      I + Y    
Sbjct: 230 LGKAWLSAYPADIHIPEVLLLLAENYVKMNFFEEASYYYDRIFKEYKNDK 279


>gi|145538077|ref|XP_001454744.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124422521|emb|CAK87347.1| unnamed protein product [Paramecium tetraurelia]
          Length = 844

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 79/224 (35%), Gaps = 32/224 (14%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           +  L   ++ +  A    N     FP      + L M A +     K QQ   + E+ + 
Sbjct: 417 RGKLLQAQKKYDDAITCLNDGITKFPSN---IEILNMLALIYKITLKVQQELEIYEKILV 473

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
             P+++      Y  G++Y   +  + +D       L+   ++ +    +   K   +Y+
Sbjct: 474 IQPQNEL---CLYEKGLNYYNDLGLILFDLNNFSESLEIFIQLNK----TEQAKDLNYYL 526

Query: 183 TVGRNQLAAKEVEIG----RYYLKRGE------Y--VAAIP----RFQLVLANYSD---- 222
            +  N+   KE          Y+K G+      Y  + +      +F   + +Y +    
Sbjct: 527 GICYNE--KKEYFNVLNHLNQYVKSGKENLEKVYCIMGSANLFLLKFDESIESYQNCIKI 584

Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
             +  +A  +L   Y    L+DEA+E      +  P     +  
Sbjct: 585 NPNNADAHYQLGNVYKQDKLLDEAKESFEQAVKIQPSNILYKQA 628


>gi|333031360|ref|ZP_08459421.1| WD40-like beta Propeller containing protein [Bacteroides coprosuis
           DSM 18011]
 gi|332741957|gb|EGJ72439.1| WD40-like beta Propeller containing protein [Bacteroides coprosuis
           DSM 18011]
          Length = 479

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 20/36 (55%), Gaps = 1/36 (2%)

Query: 95  KSL-LMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
           ++  +  A   Y+  KY++A  + E+++  YP + N
Sbjct: 28  QAQTIDEARALYAHNKYEEAKPMFEKFLKSYPNNPN 63


>gi|330959357|gb|EGH59617.1| TPR repeat-containing von Willebrand factor, type A [Pseudomonas
           syringae pv. maculicola str. ES4326]
          Length = 571

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 32/110 (29%), Gaps = 30/110 (27%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    L+    ++A + F         +              Y AG Y  A    + + 
Sbjct: 356 QQGQRLLEHHRPAEAAQRFED-------SRW-------KGVALYQAGDYASA---AQRFA 398

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
                +   D  +Y  G + A+            +  L    + ++R  +
Sbjct: 399 E---GNSAAD--HYNRGNALARS--------GELEAALDAYEQALDRQPD 435


>gi|322503219|emb|CBZ38304.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 1343

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 15/139 (10%), Positives = 44/139 (31%), Gaps = 33/139 (23%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEE 119
           E+     K   + +A  Y+ Q     P +      +S     F  ++  +++++A+   +
Sbjct: 49  EEGNEAFKAGRYHEAIRYYTQAIEVDPDSEFLYTNRS-----FAYFNIKEFEKSAADAAK 103

Query: 120 -------YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
                  +   +          Y +G++   +  D  +   + +               S
Sbjct: 104 AVEINANFFKGH----------YRLGLAQMSL-NDFGHAMESLRKAWALA-------P-S 144

Query: 173 PYVKGARFYVTVGRNQLAA 191
              +  R  +    +++A 
Sbjct: 145 ENKEAIRVAMAKCESKMAR 163


>gi|302851112|ref|XP_002957081.1| hypothetical protein VOLCADRAFT_98115 [Volvox carteri f.
           nagariensis]
 gi|300257637|gb|EFJ41883.1| hypothetical protein VOLCADRAFT_98115 [Volvox carteri f.
           nagariensis]
          Length = 572

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 13/104 (12%), Positives = 32/104 (30%), Gaps = 14/104 (13%)

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
              + +A + F + +   P   +    ++  A      G+ Q+AA +        P+  +
Sbjct: 118 AGRWREAADAFERANEKDP---LNVAVMMNLARALREEGRQQRAAEVYGAVTKLQPDHPS 174

Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
               +Y  G         +    R  +  L    + +  +    
Sbjct: 175 ---AHYRRG--------AILRSIRHNEAALAAFRQHLRLHPEHQ 207


>gi|212635447|ref|YP_002311972.1| TPR domain-containing protein [Shewanella piezotolerans WP3]
 gi|212556931|gb|ACJ29385.1| TPR repeat protein [Shewanella piezotolerans WP3]
          Length = 342

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 55/166 (33%), Gaps = 37/166 (22%)

Query: 51  VTDVRYQREVYEKAVLFLKE--QNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYS 106
           V D      VY  A+  L +   +   A +YF       P +     ++L     +  Y 
Sbjct: 180 VPDRDSPARVYN-AIAILDDVQNDHESARKYFRLLLELQPHS-----AILISNLGYSYYL 233

Query: 107 AGKYQQAASLGEEYITQYPESKNVD---------YV---YYLVGMSYAQMI---RDVPYD 151
            G+   A     + I    E +N+D         YV    Y   ++  +      D   D
Sbjct: 234 TGELTSAERYLRQAIR---EDQNLDRAWTNLGLVYVRKGLYKRALATFEQAMEPADALND 290

Query: 152 -------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
                  +   +  ++   R ++   +  Y + A+  +   + +L+
Sbjct: 291 LGYFLMLEGKYQQAIELFERAIDTSPS--YFEQAQKNLKRAKAELS 334


>gi|203284129|ref|YP_002221869.1| hypothetical protein BDU_209 [Borrelia duttonii Ly]
 gi|201083572|gb|ACH93163.1| hypothetical protein BDU_209 [Borrelia duttonii Ly]
          Length = 731

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 54/160 (33%), Gaps = 23/160 (14%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
               +K +N+S+A +  ++  +  P     +      A       +  +A     + I  
Sbjct: 33  GQEEIKNKNYSQAIKILSEAIQKHP---KEQDGYYFLAIAYRENNQLTEAEGALLDGIAI 89

Query: 124 YPESKNVDYVYY-LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
                N+DY  Y  +G    +        +    L ++Y S  ++   N           
Sbjct: 90  ---GGNIDYKLYFELGNIMFK------RGKGYYNLAIRYYSSSIKNMPNYDKA------- 133

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
               N+ A   VE G+   K  +Y  A   + + + +YS 
Sbjct: 134 --LLNR-ANSYVEQGKINFKEKDYKNAWDSYTMAIHDYSQ 170


>gi|196013721|ref|XP_002116721.1| hypothetical protein TRIADDRAFT_60779 [Trichoplax adhaerens]
 gi|190580699|gb|EDV20780.1| hypothetical protein TRIADDRAFT_60779 [Trichoplax adhaerens]
          Length = 1397

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 59/187 (31%), Gaps = 45/187 (24%)

Query: 62   EKAVLFLKEQNFSKAYEYFNQ-CSRD-----FPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
               +++  + N+ +A   + +             + VA +S      V Y+ G +++A S
Sbjct: 1114 NIGLVYYDQGNYEEALPMYQKSLKIRLSVLGHEHSAVA-QSYNNIGAVYYAQGNHEEALS 1172

Query: 116  LGEEYITQ------YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            + E+ +        +    +V   Y  +G  Y    R            L          
Sbjct: 1173 MYEKSLKIRLSVQSH-NHPDVAQSYNNIGFIYCNQGRH--------DEAL---------- 1213

Query: 170  TNSPYVKGARFYVTVGRN---QLAAKEVEIGRYYLKRGEYVAAI--------PRFQLVLA 218
              S Y K     + +  +    +A     IG  Y  +G+   AI         R  ++  
Sbjct: 1214 --SMYEKSLEIRLLILDDNHPAIAQSYDNIGNLYDDQGKDEEAIPMYEKSLKIRLSVLKD 1271

Query: 219  NYSDAEH 225
            NY D   
Sbjct: 1272 NYPDVAA 1278


>gi|216264688|ref|ZP_03436680.1| TPR domain protein [Borrelia burgdorferi 156a]
 gi|221217520|ref|ZP_03588990.1| TPR domain protein [Borrelia burgdorferi 72a]
 gi|225549782|ref|ZP_03770746.1| TPR domain protein [Borrelia burgdorferi 118a]
 gi|226320896|ref|ZP_03796447.1| TPR domain protein [Borrelia burgdorferi 29805]
 gi|215981161|gb|EEC21968.1| TPR domain protein [Borrelia burgdorferi 156a]
 gi|221192583|gb|EEE18800.1| TPR domain protein [Borrelia burgdorferi 72a]
 gi|225369590|gb|EEG99039.1| TPR domain protein [Borrelia burgdorferi 118a]
 gi|226233668|gb|EEH32398.1| TPR domain protein [Borrelia burgdorferi 29805]
          Length = 379

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 72/212 (33%), Gaps = 36/212 (16%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           K+ N+ KA  Y+ +C    P       +L        +   Y++A  + EEY+   PE+ 
Sbjct: 70  KKNNYDKAIVYYQKCLVKHPSNNY---ALFGLGDCYRNLDNYKKATDIWEEYLKYDPENI 126

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV--------KGARF 180
               V   V  SY ++        +  +   Q   +++E   ++ Y            + 
Sbjct: 127 T---VLTRVAASYRKL--------KNFQKSKQTYLKVMELMPDNDYALVGIGHLYYDFKE 175

Query: 181 YVTVGRNQLAAKEVE-----------IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
           Y    +  L   E+            IG  Y K  E+   I  F+  L     +     A
Sbjct: 176 YKEALKYWLKMYELNQSKVDVRVLTSIGNCYRKLREFTRGIYFFKKALEI---SPSNFYA 232

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +  L + Y       EA +    I E+ P+  
Sbjct: 233 VFGLADCYRGNKEYKEALKYWLDIIEKDPKNN 264


>gi|138280889|gb|ABO72631.1| DnaJ-like protein [Microcystis aeruginosa PCC 7806]
          Length = 335

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 43/101 (42%), Gaps = 6/101 (5%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
           ++  R +  +  T  R   + Y++   + +E+N+  A  ++ Q     P      ++ L 
Sbjct: 62  KEYDRSLSPEIPTFQRSAEDFYQQGWHYAQEKNYQLAIAFYQQAIAINPQ-FW--QAYLQ 118

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
            A V Y   + +Q +S   + +   P   +    YY +G+S
Sbjct: 119 RAEVYYHNQQDRQVSSDCRQVLQLKP---DCSQAYYYLGLS 156


>gi|158522486|ref|YP_001530356.1| peptidoglycan-binding LysM [Desulfococcus oleovorans Hxd3]
 gi|158511312|gb|ABW68279.1| Peptidoglycan-binding LysM [Desulfococcus oleovorans Hxd3]
          Length = 632

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 27/247 (10%), Positives = 75/247 (30%), Gaps = 38/247 (15%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE----VYEKAVLFLKEQNFSKAYEY 79
           L I  ++      G     +           R        ++ +A +  ++ +   A  +
Sbjct: 5   LFIAAALTFLLTAGCPAPVTTLQKGGPAKPARTPSANSYYLFTQAQIEKEKGSLDSATAW 64

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
             +     P +   ++     A +     +  +A    E+ +  +P+  +VD      G 
Sbjct: 65  MTRAVAADPDSAYLKR---ELAILFLMKKENDRARQTVEQLLAVHPD--DVD------GQ 113

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
               ++  + + Q   +   +   + +E   +                      + +G  
Sbjct: 114 I---LLAGILHHQGDLQGAARLYEQALENDPDQE-----------------GLYLVLGNL 153

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           Y ++G+  +A   ++ +  ++ D     +    L      + L  EA +         P+
Sbjct: 154 YTEQGQMESAAGVYEKMTRHFPD---LWDGHFFLGNTRKEMGLAKEAEKSYKTAIRLNPE 210

Query: 260 GYWARYV 266
               R+ 
Sbjct: 211 ALSPRFA 217


>gi|103487082|ref|YP_616643.1| hypothetical protein Sala_1597 [Sphingopyxis alaskensis RB2256]
 gi|98977159|gb|ABF53310.1| conserved hypothetical protein [Sphingopyxis alaskensis RB2256]
          Length = 313

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 34/108 (31%), Gaps = 14/108 (12%)

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
           +D +        +  +V ++  S Y           +N L       GR YL  G+   A
Sbjct: 199 WDAKLYPEAQAQLKSVVAKWPQSSYAS-------FAQNLL-------GRAYLDEGKPSLA 244

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
              F     +      A  ++  +  A   L    +A +    + E Y
Sbjct: 245 AVAFYNNYKDRPSGPRAPHSLMYMGVALDRLGRKADACKAFRELDEVY 292



 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 14/127 (11%), Positives = 36/127 (28%), Gaps = 14/127 (11%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           ++        ++ Y+        + + +A          +P +  A  +  +        
Sbjct: 179 VEVPATGNETKDAYDYGYRLWDAKLYPEAQAQLKSVVAKWPQSSYASFAQNLLGRAYLDE 238

Query: 108 GKYQQAASLGEEYITQY---PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           GK   AA     +   Y   P      +    +G++  ++ R             +    
Sbjct: 239 GKPSLAAVA---FYNNYKDRPSGPRAPHSLMYMGVALDRLGRKAD--------ACKAFRE 287

Query: 165 IVERYTN 171
           + E Y +
Sbjct: 288 LDEVYGD 294


>gi|67922186|ref|ZP_00515701.1| SLT:SLT [Crocosphaera watsonii WH 8501]
 gi|67856086|gb|EAM51330.1| SLT:SLT [Crocosphaera watsonii WH 8501]
          Length = 726

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 72/251 (28%), Gaps = 61/251 (24%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A   LKE     A     +  +++P   +    LL        + +   A +  +E 
Sbjct: 91  YLLASDLLKEYEGGPALRQLERLEKEYP--PMKPYILLKRGRGYELSNETDLAQATWKEL 148

Query: 121 ITQYPESKNVDYVYYLVGM---SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           I  YP+S       Y +G    SY      +    +   +      R+ E     P +  
Sbjct: 149 IETYPDSLASAKALYKLGNYDPSYWDQ--GIERFPQHPNIQAVIRQRLKEN-PKQPQLLL 205

Query: 178 ARFYVTV-------GRNQLAAKEVE---------IGRYYL-KRGEYVAAI---------- 210
                          R++L  +            I   Y      Y AAI          
Sbjct: 206 LLAKYAANDPQSNPIRDRLVNQYAAQLTPEDWQIIADGYWIVNDYYKAAIAYQKAPKTPQ 265

Query: 211 ----------------PR------FQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
                            R      ++ ++  + +AE    A+ RL      L+    A  
Sbjct: 266 NYYRIARGQQLQPRGNNRETVIAAYRQLMFGFPEAEETALALKRLA----QLSPPQTAIT 321

Query: 249 VVSLIQERYPQ 259
            +  I +++P+
Sbjct: 322 YLDEIIKKFPE 332


>gi|157829345|gb|ABV82622.1| ubiquitously transcribed tetratricopeptide repeat protein X-linked
           transcript variant 6 [Homo sapiens]
          Length = 1293

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 40/141 (28%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A +  ++  
Sbjct: 107 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 153

Query: 163 SRIVERYT------------------NSPYVKGARFYVTVGRN----QL--AAKEVEIGR 198
             ++                      N+ Y    + +     +     L  A  +  I  
Sbjct: 154 QEVLYVDPSFCRAKEIHLRXGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 213

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 214 LYETQRKYHSAKEAYEQLLQT 234


>gi|53771850|gb|AAU93524.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 26 [Homo sapiens]
          Length = 1076

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKKIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|227329221|ref|ZP_03833245.1| hypothetical protein PcarcW_18557 [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 389

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 65/194 (33%), Gaps = 29/194 (14%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              ++    + +A E FNQ   +  F   A +  L+      +   +  A  + E+ +  
Sbjct: 114 GRDYMAAGLYDRAEESFNQLVDEEDFRRSALQ-QLLQI--HQATSDWPTAIDVAEKLVKM 170

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
             +   VD  ++   ++   M  D   D       L  +                     
Sbjct: 171 GKDQLRVDIAHFYCELALLAMGSD-DLD-----KALTLL-----------------KKGA 207

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
              +Q A   + +GR Y+ + +Y  A+   + VL    D E   E +  L E Y  L   
Sbjct: 208 TADSQCARASIMMGRIYMAQQDYSRAVEALRQVLD--QDKELVSETLPMLQECYQHLDKP 265

Query: 244 -DEAREVVSLIQER 256
            D A  +   ++E 
Sbjct: 266 LDWANFLRRCVEEN 279


>gi|212704558|ref|ZP_03312686.1| hypothetical protein DESPIG_02618 [Desulfovibrio piger ATCC 29098]
 gi|212671957|gb|EEB32440.1| hypothetical protein DESPIG_02618 [Desulfovibrio piger ATCC 29098]
          Length = 611

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 38/272 (13%), Positives = 89/272 (32%), Gaps = 55/272 (20%)

Query: 46  VYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
            + +    +    E YE+ +       +  KA   F + +R    + +A  +LL +A ++
Sbjct: 76  TWPNRPAALFKAAECYEELSRRSFAISDARKAAGTFEEVARQHDSSRLADDALLRAARIR 135

Query: 105 Y-SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
                  + A  L +     YP                 ++ +++   + A +  +Q   
Sbjct: 136 ADRLKDTRGALELLDRLCRDYPRGDMYAEA--------RRLQQELAPAKTAARPAVQPAR 187

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQL----AAK---------EVEIGRY---YLKRGE-- 205
           +I +    +   + A       +  +    A K         E   G +   Y  R    
Sbjct: 188 QISDT-PPADDARQALQRYENAKKTMELLRADKRRSCWREPWENLQGDFMQVYQSRPNAT 246

Query: 206 --------------------YVAAIPR-FQLVL----ANYSDAEHAEEAMARLVE-AYVA 239
                               ++AA  R  + +L      +  +  A++A+ +  + +   
Sbjct: 247 VSAAALFRAGVSARSLADCSHLAADYRTARTLLLRVPEEFPGSALADDALLQAAQISAEE 306

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           L    EA  +++ +++ YP+G        L +
Sbjct: 307 LKDRAEAMRLLARLEKEYPRGDMRPQATALRQ 338


>gi|210617943|ref|ZP_03291829.1| hypothetical protein CLONEX_04061 [Clostridium nexile DSM 1787]
 gi|210149082|gb|EEA80091.1| hypothetical protein CLONEX_04061 [Clostridium nexile DSM 1787]
          Length = 190

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 23/174 (13%), Positives = 58/174 (33%), Gaps = 37/174 (21%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF-----VQYSAGKYQQAASL 116
           E+ V  L+E+ + +A + F +         +  +  L  A+       +   ++++A   
Sbjct: 42  EEGVSQLEEKQYEEASKSFQK--------EIDEEKNLDEAYRGMGIAYFEMEEFEKAIDA 93

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
             E +     ++    +Y  +G+S  +M           +  +    + +          
Sbjct: 94  FGEALDN--GAEETATLYNFIGISNMKM--------ENYEEAVSAFEKGMSM----EDCS 139

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS-DAEHAEEA 229
                  +  N + + E        K G++  A  +       Y  D++  +EA
Sbjct: 140 DTMKR-EMLFNTVVSYE--------KLGDWDNAKEKVSEYNEQYPGDSKAEKEA 184


>gi|187251042|ref|YP_001875524.1| hypothetical protein Emin_0632 [Elusimicrobium minutum Pei191]
 gi|186971202|gb|ACC98187.1| hypothetical protein Emin_0632 [Elusimicrobium minutum Pei191]
          Length = 110

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 11/110 (10%), Positives = 29/110 (26%), Gaps = 22/110 (20%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSV----------------TDVRYQREVYE 62
           + K A+    ++    ++        +                       +     + Y 
Sbjct: 1   MKKIAILSVLALGSALVIACGGNKKTEAEEMPQQVVEVEEIKVQEVVVDPNKAAAEQKYI 60

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPF------AGVARKSLLMSAFVQYS 106
           + +      ++  A + + +  +  P          A KS L  A  +Y 
Sbjct: 61  EGLRLFNAADYKGALKVWEEGEKLDPTNYDIKRGIDAAKSYLEQATAKYK 110


>gi|219849276|ref|YP_002463709.1| TPR repeat-containing protein [Chloroflexus aggregans DSM 9485]
 gi|219543535|gb|ACL25273.1| TPR repeat-containing protein [Chloroflexus aggregans DSM 9485]
          Length = 520

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 44/201 (21%), Positives = 65/201 (32%), Gaps = 39/201 (19%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLK-----EQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
           D        +  Q   Y  A L +      ++   +AYE    C+R  P  G   +  L 
Sbjct: 281 DEAYAEYEQIPPQHRHYVDARLRMSAILRLQKKPKQAYEILFACARLNPHHG---QLFLQ 337

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
              + Y  G  +QA    E  +   P        +YL+G  Y  M RD  +   A +  +
Sbjct: 338 MGKLLYDMGMTRQAVRAFERAVQLLPTD---AQAHYLLGFVYNTMGRD-TWALAAWRKAV 393

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
           Q                 A       R        ++G  Y++RG Y  A   FQ VL  
Sbjct: 394 QL-------------APDAHS----LR-------FDLGYMYIRRGRYDLAAKEFQQVLEQ 429

Query: 220 YSDAEHAEEAMARLVEAYVAL 240
           + D    +     L   Y  L
Sbjct: 430 WPDDIETQ---FMLGLCYKEL 447


>gi|223935403|ref|ZP_03627320.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514]
 gi|223895813|gb|EEF62257.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514]
          Length = 288

 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 22/136 (16%), Positives = 49/136 (36%), Gaps = 18/136 (13%)

Query: 57  QREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
             ++Y E+  L    + +  A   FN+ +   P + +A    L        AG  ++A  
Sbjct: 46  NPQLYLERGELHRLHEEWEGALADFNRAAALDPTSKLAE---LGRGRALLGAGNPKEALL 102

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SP 173
             E ++  +P             ++YA+ +  +           +  S++++   +    
Sbjct: 103 ALEIFLKAFPHHIEAR-------LTYARALSRLNRPA----EAAENFSQVIQLTPDPMPD 151

Query: 174 YVKGARFYVTVGRNQL 189
           Y    R  + V  N+L
Sbjct: 152 YYLE-RARMLVLANRL 166


>gi|188584720|ref|YP_001916265.1| stage II sporulation protein E, protein serine/threonine
           phosphatase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179349407|gb|ACB83677.1| stage II sporulation protein E, protein serine/threonine
           phosphatase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 833

 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSK-AYEYFNQCSRDFPFAGVARKSLLMSA 101
           D V D+    + +EKA+  LK ++  + A E   +  R + +        ++ A
Sbjct: 755 DGVFDMGDGEKWFEKAISNLKSKDPQEMAEELLEKVKRRYSYGDFPDDVTILIA 808


>gi|158285098|ref|XP_308135.4| AGAP003902-PA [Anopheles gambiae str. PEST]
 gi|157020735|gb|EAA03879.4| AGAP003902-PA [Anopheles gambiae str. PEST]
          Length = 585

 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 29/72 (40%), Gaps = 11/72 (15%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCS-----RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           KA   ++ + +++A +           R++       + L++     Y  G Y+QA    
Sbjct: 207 KAHANIQARKYTEAIQTLRSIEANTCLRNY------HQLLVLIGECYYHNGDYEQAYITL 260

Query: 118 EEYITQYPESKN 129
           +      P+SKN
Sbjct: 261 KRAHAMQPQSKN 272


>gi|118591248|ref|ZP_01548647.1| hypothetical protein SIAM614_16517 [Stappia aggregata IAM 12614]
 gi|118436324|gb|EAV42966.1| hypothetical protein SIAM614_16517 [Stappia aggregata IAM 12614]
          Length = 583

 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 15/43 (34%)

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
            I    +D   +   + Y    + RY +  +   AR  +   +
Sbjct: 268 QIELAYWDSIKSAESIAYFETYLNRYPDGQFADIARIRIDELK 310


>gi|85859714|ref|YP_461916.1| putative cytoplasmic protein [Syntrophus aciditrophicus SB]
 gi|85722805|gb|ABC77748.1| hypothetical cytosolic protein [Syntrophus aciditrophicus SB]
          Length = 152

 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 29/82 (35%), Gaps = 7/82 (8%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
           LL    V +      +A S  ++    YPES       YL G+S      DV        
Sbjct: 70  LLGIGKVFFGQPDRPKAISYFKQITMAYPESFQAPEAVYLKGVSQYIEDHDVA------- 122

Query: 157 LMLQYMSRIVERYTNSPYVKGA 178
            +      +  RY +S ++  A
Sbjct: 123 NLFDIYECLKSRYPDSEWLMRA 144


>gi|325183179|emb|CCA17636.1| sporangia induced BardetBiedl syndrome 4 protein put [Albugo
           laibachii Nc14]
          Length = 909

 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 64/196 (32%), Gaps = 42/196 (21%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           + +  +Y KA++   E    ++++ F   S   P      K            GK+  A 
Sbjct: 549 QSEYPLYVKALIARHEGKIEQSFQLFQAISCLNPGNRETIK---QIGRSFLLLGKHANAI 605

Query: 115 SLGEEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
            + +E +      K  D+ V+Y +G  Y  +        +     +Q   R         
Sbjct: 606 KVFKEVLNM---DKTEDWRVHYNIGTCYTYL--------KQFDNAIQSFQRA-------- 646

Query: 174 YVKGARFYVTVGRNQLAAKE---VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
                        N ++  +   + +   Y  +G+Y  AI  +Q  L    D     + +
Sbjct: 647 -------------NAISRHDTTFLHLADVYETQGDYKNAINTYQEALEFSPD---NPKLL 690

Query: 231 ARLVEAYVALALMDEA 246
           + L  AY+       A
Sbjct: 691 SGLGLAYLRTGDSFAA 706


>gi|323494243|ref|ZP_08099355.1| hypothetical protein VIBR0546_06797 [Vibrio brasiliensis LMG 20546]
 gi|323311406|gb|EGA64558.1| hypothetical protein VIBR0546_06797 [Vibrio brasiliensis LMG 20546]
          Length = 634

 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 35/104 (33%), Gaps = 15/104 (14%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
             TK  L    R VE    S         +      LA         YL +  Y  AI  
Sbjct: 288 GHTKQALAMAQRCVEV---SQESGNTDHMLVNCYEALATA-------YLAKKNYPEAISY 337

Query: 213 FQLVLANYSDAEHAE-----EAMARLVEAYVALALMDEAREVVS 251
              VL    D+E  E     + +++LVEAY A     +A   + 
Sbjct: 338 ANKVLDKLEDSESDEVVWEMDILSKLVEAYEATGDYQQALNYMK 381


>gi|320105829|ref|YP_004181419.1| tetratricopeptide repeat-containing protein [Terriglobus saanensis
           SP1PR4]
 gi|319924350|gb|ADV81425.1| Tetratricopeptide TPR_1 repeat-containing protein [Terriglobus
           saanensis SP1PR4]
          Length = 764

 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 36/86 (41%), Gaps = 11/86 (12%)

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
             +V +  G+Y  A S  E+     P + ++   +Y +GM+Y+++ R             
Sbjct: 689 LGWVYFRKGQYDSARSYLEDAAKLDPNNASI---HYHLGMTYSRLNRKPD--------AQ 737

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVG 185
            ++++ +    N+  +K A   +   
Sbjct: 738 VHLNKAITLAPNTQTMKDATQELQRL 763


>gi|300865339|ref|ZP_07110150.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506]
 gi|300336642|emb|CBN55300.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506]
          Length = 894

 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 15/121 (12%), Positives = 40/121 (33%), Gaps = 8/121 (6%)

Query: 1   MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
           M  ++ +   +    ++ +    LT+  ++A+  L              +V  +    ++
Sbjct: 30  MLKIIAKFPWLSSKISFTISLALLTLCLTVALPTLA---TLPPIAQQSPTVEPISTPAQL 86

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM----SAFVQYSAGKYQQAASL 116
            ++         F++A   + Q  + +     A  +  M     A      G+ + A S 
Sbjct: 87  LDRGRQLYGAGRFAEAITLWEQVQKIYA-TEGATLNQAMTLNYLATAYQELGQLETAKSA 145

Query: 117 G 117
            
Sbjct: 146 I 146


>gi|296159240|ref|ZP_06842066.1| TPR repeat-containing protein [Burkholderia sp. Ch1-1]
 gi|295890499|gb|EFG70291.1| TPR repeat-containing protein [Burkholderia sp. Ch1-1]
          Length = 530

 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 22/79 (27%), Gaps = 15/79 (18%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQC----SRDFPFAGVA----RKSLLMSAFVQY-------S 106
           ++    L+  N+  A E F+         +     A      S L +A   +        
Sbjct: 365 QQGRWNLEHGNYKAAAERFDDPMWKGRAQYLAGDYAAALETFSRLKTAQSYFYIGNTLAH 424

Query: 107 AGKYQQAASLGEEYITQYP 125
              Y  A    +  +   P
Sbjct: 425 LDDYAGAIKAYDNALQLQP 443


>gi|303278488|ref|XP_003058537.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226459697|gb|EEH56992.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 556

 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 57/205 (27%), Gaps = 62/205 (30%)

Query: 66  LFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM-SAFVQYSAGKYQQAASLGEEYI--- 121
            FLK+++++ A        +  P    +  S L   A+  + AG  ++A      Y+   
Sbjct: 30  DFLKDRDYAGAIALLEFKRQQSP----SDVSNLEWLAYAYFHAGDPEKALDTY-RYLLRR 84

Query: 122 -----------------------------------TQYPE------SKNVDYVYYLVGMS 140
                                                +         K  D       M+
Sbjct: 85  ESDPDPTYHTFAAACLFYLGQYDEAEEEAKKGPKTKLHTRVLFHCAHKQNDEA---KLMT 141

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY-VTVGRNQLAAKEVEIGRY 199
           Y Q + D   DQ    L L  +  +   +             +   R  LA   V +   
Sbjct: 142 YHQQLTDSVEDQ----LSLASIHYLRSHF---QEATDIYKRLLLENREHLALN-VYVALC 193

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAE 224
           Y K   Y  ++    + L +Y D+ 
Sbjct: 194 YCKLEYYDVSLEILNVYLQSYPDSP 218


>gi|254446689|ref|ZP_05060164.1| Tetratricopeptide repeat family [Verrucomicrobiae bacterium DG1235]
 gi|198256114|gb|EDY80423.1| Tetratricopeptide repeat family [Verrucomicrobiae bacterium DG1235]
          Length = 1065

 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 11/93 (11%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           +E +FS A         + P +    ++ L+ A      G Y  A +L EE  +Q   + 
Sbjct: 379 EEGDFSGAIITLRNLVANRPESS---EAKLLLAEAYNRQGNYDAALALYEEIDSQAESTP 435

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           ++ Y      +S    +R    D+   +   + 
Sbjct: 436 DISY------LSGITQLRSRNRDE--ARRAFES 460


>gi|114762301|ref|ZP_01441759.1| Tetratricopeptide TPR_4 [Pelagibaca bermudensis HTCC2601]
 gi|114544919|gb|EAU47923.1| Tetratricopeptide TPR_4 [Roseovarius sp. HTCC2601]
          Length = 525

 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 18/132 (13%), Positives = 41/132 (31%), Gaps = 33/132 (25%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++  +    +++ +A + F       P         L   +  Y  G+Y  A  + +   
Sbjct: 332 QQGRIAFDRKDYERAADLF--VD---P---------LWRGYALYRDGQYDDAVLVLDR-- 375

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                         + GM+    I+      R  +  ++     + R  + P   GA   
Sbjct: 376 ------VETAQAASIQGMA---QIKG-----RHYRDGVRAFETALARDPDYP---GAAEN 418

Query: 182 VTVGRNQLAAKE 193
           +   +  +A  E
Sbjct: 419 LETAKRIVAYVE 430


>gi|157426917|ref|NP_001098729.1| tetratricopeptide repeat protein 38 [Bos taurus]
 gi|296486863|gb|DAA28976.1| tetratricopeptide repeat domain 38 [Bos taurus]
          Length = 466

 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 47/147 (31%), Gaps = 29/147 (19%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQ----------REVYEKAVLFLKEQNFSKAYEYFN 81
              L+G       D  LD+      +           +++  AV    + NF KA E + 
Sbjct: 73  GLVLIGTGSSVRLDKELDAAVKTMVEISKTQPLTHREQLHVSAVETFAKGNFPKACELWE 132

Query: 82  QCSRDFPFAGVARKSLLMSA-----FVQYSAGKYQQAASLGEEYITQYPE-SKNVDYVYY 135
           Q  +D P          M A        +  G  +Q           YP  + ++    Y
Sbjct: 133 QILQDHPTD--------MLALKFSHDAYFYLGYQEQMRDSVAR---VYPFWTPDISLSSY 181

Query: 136 LVGMSYAQMIRDVPYDQ--RATKLMLQ 160
           + G+    ++    YDQ  +  K  L 
Sbjct: 182 VKGIYSFGLMETNLYDQAKKLAKEALA 208


>gi|71028630|ref|XP_763958.1| hypothetical protein [Theileria parva strain Muguga]
 gi|68350912|gb|EAN31675.1| hypothetical protein TP04_0323 [Theileria parva]
          Length = 882

 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 24/71 (33%), Gaps = 7/71 (9%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI-- 121
             +  +  N  +A   F +C RD     +  +++   A        Y  A    + ++  
Sbjct: 157 GEMSQETGNIDQAIYCFKKCQRDQE-GQINEQAVFALAICYIEKKDYDNA---AKRFLVL 212

Query: 122 -TQYPESKNVD 131
              +P  K + 
Sbjct: 213 FNLHPNDKLIA 223


>gi|125973651|ref|YP_001037561.1| TPR repeat-containing serine/threonin protein kinase [Clostridium
           thermocellum ATCC 27405]
 gi|125713876|gb|ABN52368.1| serine/threonine protein kinase with TPR repeats [Clostridium
           thermocellum ATCC 27405]
          Length = 486

 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 52/155 (33%), Gaps = 32/155 (20%)

Query: 44  RDVYLDSVTDVRYQ----REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
           +D+ +  V D+R +      +Y K  LF + + + +A + + +     P           
Sbjct: 349 KDIDITQVEDIRQEALEDNLLYLKGKLFFELKKYEEAVKVYEKLVSRNP---DDLNYRYK 405

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL-VGMSY-AQMIRDVPYDQRATKL 157
            A       + +++  + E+       +K    + Y+   + +    I+D        K 
Sbjct: 406 LACAYGLNDEQEKSIEILED------INKKTPGMLYIVKKLGHAYDQIKDF-------KK 452

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
              Y +  +    +           T+ RN+L   
Sbjct: 453 ARAYFNYAIRLDPSD----------TIIRNRLEEY 477


>gi|312961301|ref|ZP_07775806.1| TPR domain protein [Pseudomonas fluorescens WH6]
 gi|311284959|gb|EFQ63535.1| TPR domain protein [Pseudomonas fluorescens WH6]
          Length = 579

 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 25/73 (34%), Gaps = 15/73 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCS----RDFPFAGVAR----KSLLMSAFVQY-------S 106
           ++    LK++  ++A E+F          +     A      +    A+  Y        
Sbjct: 358 QQGQYLLKKKRPAEAAEHFQDPQWQGVALYEAGNYAEAIKRFAEGNDAYSHYNRGNALAR 417

Query: 107 AGKYQQAASLGEE 119
           +G+ + A    E+
Sbjct: 418 SGELEAAVDAYEQ 430


>gi|301064231|ref|ZP_07204674.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
 gi|300441676|gb|EFK05998.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
          Length = 260

 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 39/115 (33%), Gaps = 18/115 (15%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E Y+KA     +   S A +++ +     P      ++L     +      Y  A    E
Sbjct: 136 ETYQKARALHHDGRLSDAAKWYEKVISVDPGH---VEALNNRGVLYLHEKDYSSAQRYFE 192

Query: 119 EYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           + I   P     DYV  YY +    A   R         +  L+Y+ + +    +
Sbjct: 193 KAIRLKP-----DYVDPYYNLACVSAATDR--------VRQSLRYLQKAISMDPD 234


>gi|288555804|ref|YP_003427739.1| rhomboid protein membrane-associated serine peptidase [Bacillus
           pseudofirmus OF4]
 gi|288546964|gb|ADC50847.1| rhomboid protein, putative membrane-associated serine peptidase
           [Bacillus pseudofirmus OF4]
          Length = 512

 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 43/112 (38%), Gaps = 22/112 (19%)

Query: 64  AVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           A  +++E  F +AY           D P      ++  + A+++Y  G+Y++A     + 
Sbjct: 405 AQEYMQEGRFDEAYPLIETVLEEENDNP------EAYFLMAYLEYEFGQYEKARESLLKT 458

Query: 121 ITQYPE-SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           +   P   +     +Y + ++++++          T+  +  +   +     
Sbjct: 459 VELRPSFHE----AHYNLALTHSRL--------GNTEEAIASLEEAIALAPE 498


>gi|156362617|ref|XP_001625872.1| predicted protein [Nematostella vectensis]
 gi|156212725|gb|EDO33772.1| predicted protein [Nematostella vectensis]
          Length = 442

 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 69/229 (30%), Gaps = 64/229 (27%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
             +  + V   +  D    +E+  K +  L +Q    A  YF Q   + P + +      
Sbjct: 7   ANKEKKTVDPKNTYDRSIAKEL-NKGMALLDKQKVEDALRYFRQLVEEHPKSPL------ 59

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
                                               Y   ++  ++      DQR +  +
Sbjct: 60  ----------------------------------ALYGKAVALDKLA-----DQRRSNDL 80

Query: 159 LQYMSRIVERYTNSPYVKG--ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
           LQ     ++ Y   P +    A         ++A +   +GR    R    AA    + V
Sbjct: 81  LQ---ECIQNYRKIPELPDCPAELKKIALV-RMAGRLSFLGR---MRQA--AAA--LEKV 129

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREV-VSLIQERYPQGYWAR 264
            + +       + +  L   Y+      +A +V   +++   P   +A+
Sbjct: 130 ASLFP---SDVKVLKDLGVQYLMYGNNQDAEKVFKKVLKLN-PGSGFAK 174


>gi|82592706|gb|ABB84522.1| unknown [Myxococcus xanthus]
          Length = 596

 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 25/72 (34%), Gaps = 14/72 (19%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSL--LMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
            + +A E  N+C    P      ++   L       +  + ++ A   + ++   P    
Sbjct: 526 RYRQAIEQLNKCLELEP-----TRAECHLYLGSAYANDNQPEKGAVHYKRFLELAPNH-- 578

Query: 130 VDYVYY--LVGM 139
               YY  + G+
Sbjct: 579 ---AYYERVKGL 587


>gi|56786614|gb|AAW29409.1| P-209 [Borrelia hermsii DAH]
          Length = 593

 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 58/168 (34%), Gaps = 23/168 (13%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           Y + + +     +K +N+ +A +  ++  + +P     +      A       +  +A  
Sbjct: 25  YSQRLIKIGQEEIKNKNYLQAIKILSEAIQKYP---KVQNGYYFLAIAYRENNQLTEAEG 81

Query: 116 LGEEYITQYPESKNVDYVYY-LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
              + I       ++DY  Y  +G    +        +    L ++Y S  V+   N   
Sbjct: 82  ALLDGIAI---GGDIDYKLYFELGNIMFK------RGEGYYNLAIKYYSNSVKNMPNYDK 132

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
                       N+ A   VE G+   K  +Y  A   + + + +YS 
Sbjct: 133 A---------LLNR-ANSYVEQGKINFKEKDYKNAWDSYSMAIHDYSQ 170


>gi|75907536|ref|YP_321832.1| heat shock protein DnaJ-like protein [Anabaena variabilis ATCC
           29413]
 gi|75701261|gb|ABA20937.1| Heat shock protein DnaJ-like protein [Anabaena variabilis ATCC
           29413]
          Length = 204

 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 14/94 (14%), Positives = 34/94 (36%), Gaps = 8/94 (8%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ----CSRDFPFAGVARKS 96
           Q++++   +         E+  + V   +E+ + KA +Y       C           ++
Sbjct: 97  QATQEENREREPLTIPLAELLSEGVTACQEKRYPKAIKYLEDYCHICQDRH-TQAY-IQA 154

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
            +         G+ Q+A +L +  +  +P    V
Sbjct: 155 QMWLIKAYQLGGQLQRAVALCQ-MLVNHP-HPQV 186


>gi|15594540|ref|NP_212329.1| cell division control protein 27, putative [Borrelia burgdorferi
           B31]
 gi|218249485|ref|YP_002374723.1| TPR domain protein [Borrelia burgdorferi ZS7]
 gi|223889253|ref|ZP_03623841.1| TPR domain protein [Borrelia burgdorferi 64b]
 gi|226321513|ref|ZP_03797039.1| TPR domain protein [Borrelia burgdorferi Bol26]
 gi|2688072|gb|AAC66569.1| cell division control protein 27, putative [Borrelia burgdorferi
           B31]
 gi|218164673|gb|ACK74734.1| TPR domain protein [Borrelia burgdorferi ZS7]
 gi|223885286|gb|EEF56388.1| TPR domain protein [Borrelia burgdorferi 64b]
 gi|226232702|gb|EEH31455.1| TPR domain protein [Borrelia burgdorferi Bol26]
 gi|312147863|gb|ADQ30522.1| TPR domain protein [Borrelia burgdorferi JD1]
          Length = 379

 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 72/212 (33%), Gaps = 36/212 (16%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           K+ N+ KA  Y+ +C    P       +L        +   Y++A  + EEY+   PE+ 
Sbjct: 70  KKNNYDKAIVYYQKCLVKHPSNNY---ALFGLGDCYRNLDNYKKATDIWEEYLKYDPENI 126

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV--------KGARF 180
               V   V  SY ++        +  +   Q   +++E   ++ Y            + 
Sbjct: 127 T---VLTRVAASYRKL--------KNFQKSKQTYLKVMELIPDNDYALVGIGHLYYDFKE 175

Query: 181 YVTVGRNQLAAKEVE-----------IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
           Y    +  L   E+            IG  Y K  E+   I  F+  L     +     A
Sbjct: 176 YKEALKYWLKMYELNQSKVDVRVLTSIGNCYRKLREFTRGIYFFKKALEI---SPSNFYA 232

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +  L + Y       EA +    I E+ P+  
Sbjct: 233 VFGLADCYRGNKEYKEALKYWLDIIEKDPKNN 264


>gi|54302895|ref|YP_132888.1| hypothetical protein PBPRB1216 [Photobacterium profundum SS9]
 gi|46916319|emb|CAG23088.1| conserved hypothetical protein [Photobacterium profundum SS9]
          Length = 388

 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 8/77 (10%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA--FVQYSAGKYQQAASLGEE 119
           E A L L+E ++ KA     Q  R        +++ +  A     Y    + +A    ++
Sbjct: 310 ELAQLLLQEGHYHKALTELEQVKRKD------KQADVELAKVRAYYKLENFDKAIIHAKQ 363

Query: 120 YITQYPESKNVDYVYYL 136
                P S +  +V YL
Sbjct: 364 ANNITPSSASKSWVKYL 380


>gi|315186422|gb|EFU20182.1| Tetratricopeptide TPR_1 repeat-containing protein [Spirochaeta
           thermophila DSM 6578]
          Length = 305

 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 30/95 (31%), Gaps = 13/95 (13%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L     + +  +         D+              +     + +E +FS+A   + Q 
Sbjct: 6   LVPAAILCLLVMTSCASSPRPDL----------AEAYFSLGNAYYEEGDFSRAVGAYTQA 55

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
            R   F+    +     A      G+Y +A +L E
Sbjct: 56  LR---FSPHTPRIEYNLARTYIRTGEYDRAEALLE 87


>gi|299116794|emb|CBN74907.1| kinesin light chain-like protein [Ectocarpus siliculosus]
          Length = 874

 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 72/231 (31%), Gaps = 29/231 (12%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QC--SRDFPFAGVARKSLLMSAFVQ 104
            + D+   +++  +AV   ++  + +A                P       +L   A + 
Sbjct: 595 DLDDLAVAKDLCNQAVGLSQQGKYEEAEPLSERSLAICEKSLGPDHPDVATALNSRAILL 654

Query: 105 YSAGKYQQAASLGEEYI-----TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
            + GKY++A  L E  +     +  P   +V       G       +         +  L
Sbjct: 655 MNQGKYEEAGPLLERSLAIREKSLGPNHPDVATALNNRGELLMSQGKYEEAGP-LVERAL 713

Query: 160 QYMSRIVERYTNSPYVKGA-RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
               + +      P V  A      +  NQ A   +  G+ Y++ G       R  ++L 
Sbjct: 714 AIREKSLG--PIHPLVATALNSRANLLMNQ-ANLLMNQGK-YMETG---PLFERSLVILE 766

Query: 219 NY--SDAEHAEEAMARLVEAYVALALMDEA----REVVSL----IQERYPQ 259
            Y   D  H    +     + V     +EA       +++    +   +P 
Sbjct: 767 KYLGPDHPHVATTLNYRANSLVDQGKYEEAGPLFERSLAIREKSLGPEHPD 817


>gi|168025779|ref|XP_001765411.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683464|gb|EDQ69874.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 461

 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 30/211 (14%), Positives = 59/211 (27%), Gaps = 45/211 (21%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            +     ++    +A   F++     P    A   +L       S G+Y++AA+  E  +
Sbjct: 200 NRGNSRSRQGKMEEALADFDRSIELAP---YAADPVLNRGVTLESLGRYEEAAADYEAVL 256

Query: 122 TQYPESKNV--------------DYVY--YLVGM----------SYAQMIRDVPYDQRAT 155
              P                   D     Y   +          +   +I    Y     
Sbjct: 257 LAQPNDPAAWNNLGNVKAASGLWDEALSNYRRAVQIAPEFSFAAANYALIL---YQVGKE 313

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY----YLKR------GE 205
               +    ++ +Y   P V+ A       +   A  E   GR     Y  R       +
Sbjct: 314 NEAFKQFRSLLRKYPEFPDVRAALAVTLYAQGLTAEAETNWGRVEDLRYRDRNWVRNTRK 373

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
           +     R    L  + D +   +A   + ++
Sbjct: 374 WPP---RLVKALEGFLDVKAVAKASTLMTKS 401


>gi|89889650|ref|ZP_01201161.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
 gi|89517923|gb|EAS20579.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
          Length = 459

 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 50/159 (31%), Gaps = 27/159 (16%)

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            E         P      ++ +   ++    G  +    + +++    P S       Y 
Sbjct: 200 IESLEAEIERNPTN---EQAYINLIYMHGRNGDKEALFEVAQDFERNVPNSDAAHLALYK 256

Query: 137 V---------GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
           +         G++  + I       R TK  ++ +   +     S         VT   +
Sbjct: 257 IFIENDRIDDGVASLEKILTSDKIDRETK--MKVLQDFISM---SDGRVDLENAVTQAID 311

Query: 188 QL--------AAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
            L        A + +  G YYLK+ + V AI  ++  L 
Sbjct: 312 WLSDDVEDPNAYRAM--GDYYLKKNDAVQAIAFYEKGLE 348


>gi|240102220|ref|YP_002958528.1| hypothetical protein TGAM_0162 [Thermococcus gammatolerans EJ3]
 gi|239909773|gb|ACS32664.1| Conserved hypothetical protein [Thermococcus gammatolerans EJ3]
          Length = 340

 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 2/63 (3%)

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEH-AEEAMARLVEAYVALALMDEA-REVVSL 252
           EIG  Y    +  +AI  ++ V+    D       A+  L +AY    + ++A      L
Sbjct: 59  EIGHVYAHLDDVESAIELYRRVVERKKDDPEEYATALYYLADAYEHFGMPEKAIETYQKL 118

Query: 253 IQE 255
           ++ 
Sbjct: 119 LEH 121


>gi|256820362|ref|YP_003141641.1| hypothetical protein Coch_1535 [Capnocytophaga ochracea DSM 7271]
 gi|315223479|ref|ZP_07865336.1| TPR repeat-containing protein [Capnocytophaga ochracea F0287]
 gi|256581945|gb|ACU93080.1| Tetratricopeptide TPR_2 repeat protein [Capnocytophaga ochracea DSM
           7271]
 gi|314946652|gb|EFS98643.1| TPR repeat-containing protein [Capnocytophaga ochracea F0287]
          Length = 251

 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 8/70 (11%), Positives = 23/70 (32%), Gaps = 3/70 (4%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           +EKA  +  +  +  A + +    +       +       A   Y      ++    E+ 
Sbjct: 26  FEKATQYYDQGEYQNAIDQYKSILKS---GKESSALYYNLANTYYKLNHVPESIYYYEKA 82

Query: 121 ITQYPESKNV 130
           +   P+++  
Sbjct: 83  LQLNPKNQQA 92


>gi|158335983|ref|YP_001517157.1| TPR repeat-containing serine/threonine protein kinase
           [Acaryochloris marina MBIC11017]
 gi|158306224|gb|ABW27841.1| serine/threonine kinase with TPR repeats [Acaryochloris marina
           MBIC11017]
          Length = 810

 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 17/146 (11%), Positives = 41/146 (28%), Gaps = 23/146 (15%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
            +  Y       +  N+  A E F    +   D+       ++ L         GKY +A
Sbjct: 341 PQWHYFWGQQAAQSGNWQSATENFEQALELKADY------TEAALKLGETYAEIGKYPEA 394

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
            +  +  + Q P++               +   ++ +     +  +   +  +       
Sbjct: 395 IAQFDTLLKQQPKTAAA-----------FRERGEIRFATGGYQAAISDYNEALTLDPKD- 442

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRY 199
                  +    + +L   E  I  Y
Sbjct: 443 --AETYNHRGDAQVELGKYEAAIADY 466


>gi|94969216|ref|YP_591264.1| hypothetical protein Acid345_2189 [Candidatus Koribacter versatilis
           Ellin345]
 gi|94551266|gb|ABF41190.1| hypothetical protein Acid345_2189 [Candidatus Koribacter versatilis
           Ellin345]
          Length = 216

 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 15/86 (17%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP------FAGVARKSLLMSAF 102
           ++ +  +   E Y+ A+  +   ++  A E+F++  +  P      +      ++L    
Sbjct: 104 ENASKFKTPEEHYDFAISLVNMGDYITAREHFDKLLKTHPTKDFIWYGA----AVLECLT 159

Query: 103 VQYSAGKYQQAASLGEEYITQYPESK 128
             Y      +A     E I   P ++
Sbjct: 160 SHY-----PEALRALAESIRLNPSNR 180


>gi|14270308|emb|CAC39452.1| immunophilin FKBP-52 [Mus musculus]
          Length = 453

 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 18/146 (12%), Positives = 43/146 (29%), Gaps = 30/146 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARK-------SLLMSAFVQYSAGK 109
           E+   + KE  + +A   + +      +         +K       S L  A        
Sbjct: 270 ERGTAYFKEGKYKQALLQYKKIVSWLEYESSFSGEEMQKVHALRLASHLNLAMCHLKLQA 329

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           +  A     + +     ++      +  G ++   + D                ++++ Y
Sbjct: 330 FSAAIESCNKALELDSNNEKG---LFRRGEAHL-AVNDFDL-------ARADFQKVLQLY 378

Query: 170 TNSPYVKGARFYVTVG----RNQLAA 191
            ++     A+  + V     R QLA 
Sbjct: 379 PSNK---AAKTQLAVCQQRTRRQLAR 401



 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 35/84 (41%), Gaps = 2/84 (2%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFS 74
             +++   L    ++A+C L      ++ +    ++  D   ++ ++ +    L   +F 
Sbjct: 306 MQKVHALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFD 365

Query: 75  KAYEYFNQCSRDFPFAGVARKSLL 98
            A   F +  + +P +  A K+ L
Sbjct: 366 LARADFQKVLQLYP-SNKAAKTQL 388


>gi|322791824|gb|EFZ16038.1| hypothetical protein SINV_06722 [Solenopsis invicta]
          Length = 245

 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 30/83 (36%), Gaps = 11/83 (13%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEE 119
            +AV    E+++ KA +++ +     P A    A++S +          K          
Sbjct: 123 SEAVSAFVEKDYEKAIQFYTEAIVLNPQAALLYAKRSQVFLI-----LNKPNACIRDCNR 177

Query: 120 YITQYPE----SKNVDYVYYLVG 138
            I   P+     K     YYL+G
Sbjct: 178 AIELNPDSAAAHKFRGRAYYLLG 200


>gi|300869756|ref|YP_003784627.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000]
 gi|300687455|gb|ADK30126.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000]
          Length = 933

 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 24/78 (30%), Gaps = 12/78 (15%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
            Y     + +++ +  A  Y+      +  + F           A   Y    Y +A   
Sbjct: 70  YYYIGACYFQDKQYENAINYYKLAFDINDSYSFCN-------NIANSYYQLKNYDEALIW 122

Query: 117 GEEYI-TQY-PESKNVDY 132
               I   Y P +  ++Y
Sbjct: 123 YNRAIERLYSPYNAKLNY 140


>gi|295094334|emb|CBK83425.1| hypothetical protein [Coprococcus sp. ART55/1]
          Length = 563

 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 9/68 (13%), Positives = 29/68 (42%), Gaps = 17/68 (25%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFP---------FAGVARKSLLMSAFVQYSAGKYQ 111
           Y+KA  + K +++  A + +++  +D+          +  +  ++        Y   +Y+
Sbjct: 344 YKKAEQYYKNKDYENAIKSYDKVDKDYKDCVAEKDKCYQALGAQA--------YKDKEYK 395

Query: 112 QAASLGEE 119
           ++    E+
Sbjct: 396 KSVDYYEK 403



 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 30/217 (13%), Positives = 60/217 (27%), Gaps = 43/217 (19%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
                 + +       +  +  Y   +  +   ++  A + FN            + +  
Sbjct: 212 SSDGDEESFSSDDAFDKAYQCYYNAGMDQMNAASYDAAIDAFNNA------GSY-KDASD 264

Query: 99  MSAFVQYS-------AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
                 Y        A KY  A S+    I +Y +S+       L+   Y     ++  D
Sbjct: 265 KVIECTYKKAEALITAKKYDDAISIL-STIEEYSDSQT------LLAKCYYNKASEL-LD 316

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
                            Y  S +    +   +    + A +       Y K  +Y  AI 
Sbjct: 317 GGKYDDAYD-------MYMKSEF-DDYKNKASECTYKKAEQ-------YYKNKDYENAIK 361

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
            +  V  +Y D    ++      + Y AL       +
Sbjct: 362 SYDKVDKDYKDCVAEKD------KCYQALGAQAYKDK 392


>gi|290994703|ref|XP_002679971.1| predicted protein [Naegleria gruberi]
 gi|284093590|gb|EFC47227.1| predicted protein [Naegleria gruberi]
          Length = 1064

 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 65/208 (31%), Gaps = 37/208 (17%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A +   ++ + +A   F QC    P         L      Y    +++A    E  +  
Sbjct: 192 ACIKYHKKQYKEALSEFEQCLLMNPQGP--ADIRLGMGLCHYQLDNFERAKQCFERVLQL 249

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML-QYMSRIVERYT-NSPYVKGARFY 181
            P +        +  + Y  +I     D+   +  +  Y+ R       NS         
Sbjct: 250 DPNN--------VSALIYLAIIDLNSRDEELLQNAVKNYLKRAYSLDPGNSQ-------- 293

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE---EAMARLVEAYV 238
                N L         ++ +R          +LV A + + +  +   E+   +  AY 
Sbjct: 294 ---VLNLLGNH------FFFRRE----VDKTEELVFAAFHNTKSPKIKAESCYNMARAYH 340

Query: 239 ALALMDEA-REVVSLIQERYPQGYWARY 265
                D A +    ++   +P+   ARY
Sbjct: 341 HKKDYDSAFKYYYRIVSRLWPEYTLARY 368


>gi|149176413|ref|ZP_01855027.1| putative methyltransferase [Planctomyces maris DSM 8797]
 gi|148844765|gb|EDL59114.1| putative methyltransferase [Planctomyces maris DSM 8797]
          Length = 1398

 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 37/112 (33%), Gaps = 6/112 (5%)

Query: 30  IAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
           +A+      E+Q + D Y  ++     Y   +     L L+     +A E   Q  R  P
Sbjct: 112 LAITLANSGEKQRAIDAYRKALELKPGYPDALINLGNLLLETDEVEEAIEICKQVVRLAP 171

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV--DYVYYLVG 138
                  +    A     A   + A +  +  +   P+  +   +Y  +L  
Sbjct: 172 ---DLHTAQFNLANALAKAEDTESADAAYQRALQLAPDHLDTMKNYAVFLSA 220


>gi|126658024|ref|ZP_01729176.1| hypothetical protein CY0110_05397 [Cyanothece sp. CCY0110]
 gi|126620662|gb|EAZ91379.1| hypothetical protein CY0110_05397 [Cyanothece sp. CCY0110]
          Length = 214

 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 25/199 (12%), Positives = 61/199 (30%), Gaps = 46/199 (23%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--- 88
           +  ++G   QSS      SV  V    E+ ++ +   ++ N+  A   FNQ     P   
Sbjct: 1   MSLIIGCNNQSSSVPIESSVLTVDTV-EMVQQGIEKSRQGNYEAAVNDFNQVIAQNPQDI 59

Query: 89  ---------FAGVAR-------------------KSLLMSAFVQYSAGKYQQAASLGEEY 120
                    ++ + +                   ++ +    V    G+ ++A +  E+ 
Sbjct: 60  NAYFNRGFAYSSLGQFEQALADFTKVLKLDPQMVQAYVNRGNVYLQLGEDKKAIADYEKA 119

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +   P      +    +G+++            + +L     ++ V       Y +    
Sbjct: 120 LKINPND---AFAQNNLGLAHLNA--------GSPELAEIDFTQAVTIDP--MYGEAYYN 166

Query: 181 YVTVGRNQLAAKEVEIGRY 199
                 + L   +  I  +
Sbjct: 167 RGLALID-LGETKKAIADF 184


>gi|124004229|ref|ZP_01689075.1| tetratricopeptide repeat domain protein [Microscilla marina ATCC
           23134]
 gi|123990299|gb|EAY29798.1| tetratricopeptide repeat domain protein [Microscilla marina ATCC
           23134]
          Length = 483

 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 30/83 (36%), Gaps = 10/83 (12%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           K         +  A + FNQ     P   +   +L++ A   +   KY +A    ++   
Sbjct: 272 KGATHSDNAEYKSAIKIFNQALTLEPQNKI---ALILHANTAFKMKKYDKAIENYDQIQA 328

Query: 123 QYPESKNVDYV--YYLVGMSYAQ 143
                 + DY   YY  G +Y +
Sbjct: 329 L-----DADYAYSYYGKGNAYKE 346


>gi|11024656|ref|NP_067592.1| synaptonemal complex protein SC65 [Rattus norvegicus]
 gi|57192|emb|CAA46449.1| Sc65 synaptonemal complex protein [Rattus norvegicus]
 gi|444751|prf||1908200A synaptonemal complex protein
          Length = 431

 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 7/39 (17%), Positives = 19/39 (48%), Gaps = 1/39 (2%)

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVD-YVYYLVGM 139
           +  + A + ++A +    ++ + P+ +    Y+ Y  GM
Sbjct: 123 YAHFKANRLEKAVAAAYTFLQRNPKHELTAKYLNYYRGM 161


>gi|332883325|gb|EGK03608.1| hypothetical protein HMPREF9456_01675 [Dysgonomonas mossii DSM
           22836]
          Length = 1200

 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 50/136 (36%), Gaps = 17/136 (12%)

Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
           ++   Y +G+ Y   ++D+          +   +  + R+ N+P ++   + + +   +L
Sbjct: 604 IEDALYKMGLIYKDKLQDMDL-------AIDAFNTNIHRFPNTPNLEEIYYQLFLIYMRL 656

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLA-----NYSDAEHAEEAMARLVEAYVALALMD 244
               +    Y  K     A+      V       N+ +    ++++    EAY A    D
Sbjct: 657 GDNNMM-ATYRSKLMNEFASGKYAGPVSQPDYEWNFRNMASLQDSLYN--EAYKAYQQAD 713

Query: 245 --EAREVVSLIQERYP 258
               R   + +  +YP
Sbjct: 714 VETVRRNYAAMNTKYP 729


>gi|327404353|ref|YP_004345191.1| hypothetical protein Fluta_2367 [Fluviicola taffensis DSM 16823]
 gi|327319861|gb|AEA44353.1| Tetratricopeptide TPR_1 repeat-containing protein [Fluviicola
           taffensis DSM 16823]
          Length = 322

 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 56/187 (29%), Gaps = 40/187 (21%)

Query: 69  KEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
           K++N+SKA  +F         +      +++     F  YS G   +A     + +   P
Sbjct: 164 KQKNYSKAITHFQTLISKDSLY------KEAYNNLGFCYYSLGDNIKALKAINKALEIDP 217

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
                                 V       K  L+ +++ +  Y                
Sbjct: 218 RYPEA-----------YDKRSQVWMATGDYKKALEDLNKALSLYP-------------FL 253

Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
              L  + +     YL+  +Y  A+    L+L     A+   + +    + Y  +   + 
Sbjct: 254 STSLNNRALI----YLEMKQYSDALGDMNLLL---QTAKPTADLLIIRAQIYKEMGNFEL 306

Query: 246 AREVVSL 252
             + + +
Sbjct: 307 MEQDLKI 313


>gi|254417606|ref|ZP_05031343.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC
           7420]
 gi|196175628|gb|EDX70655.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC
           7420]
          Length = 909

 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 62/179 (34%), Gaps = 30/179 (16%)

Query: 71  QNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           + + +A   F+Q     P  +     + +++      +  +Y++A +  ++ I   P+  
Sbjct: 272 ERYEEAIASFDQAITLNPDYYKAWNGRGIVLI-----NLKRYEEAIASYDQAIALNPD-- 324

Query: 129 NVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
             DY  +   G++   + R         +  +    + +    +  Y   A     V   
Sbjct: 325 --DYQAWNNRGVALGNLER--------YEEAIASYDQAIALNPD-DY--QAWNNRGVALG 371

Query: 188 QLAAKEVEIGRY----YLKRGEYVAAIPRFQLV--LANYSDAEH-AEEAMARLVEAYVA 239
            L   E  I  Y     L    Y A   R   +  L  Y +A    ++A+A   + Y A
Sbjct: 372 NLERYEEAIASYDQAIALNPDNYEAWNNRGNTLRNLERYEEAIASYDKALALNPDNYEA 430



 Score = 36.2 bits (83), Expect = 4.3,   Method: Composition-based stats.
 Identities = 9/113 (7%), Positives = 41/113 (36%), Gaps = 18/113 (15%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           + + +     + + +A   ++Q     P  +     ++         +  +Y++A +  +
Sbjct: 670 FMRGIALRNLEKYEEAIASYDQAIALNPDFY-----QAWFNRGNTLRNLERYEEAIASYD 724

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           + I   P+  +    +++ G++   + R         +  +   ++ +    +
Sbjct: 725 QAIALNPDDSS---AWFMRGIALGNLER--------YEEAIASFNQAIALTPD 766


>gi|83945716|ref|ZP_00958061.1| TPR domain protein [Oceanicaulis alexandrii HTCC2633]
 gi|83850917|gb|EAP88777.1| TPR domain protein [Oceanicaulis alexandrii HTCC2633]
          Length = 685

 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 48/128 (37%), Gaps = 14/128 (10%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
            G   + ++ +Y     +  +  ++   A+  ++  ++++A E F++     P       
Sbjct: 236 FGKALEEAQTLYDRDPDNPVFISQL---AIERMQTGDYARAVELFDRVLERAPGDP---- 288

Query: 96  SLLMS-AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           + L S      + G+ ++A +  +      P   +    +Y  G++  +  R    D+RA
Sbjct: 289 ATLTSRGHALKTWGRSEEAIASYQAACQSDPAHGD---AWY--GLANLKTYR-FDADERA 342

Query: 155 TKLMLQYM 162
                   
Sbjct: 343 IMQAEDSR 350


>gi|114563847|ref|YP_751361.1| TPR repeat-containing protein [Shewanella frigidimarina NCIMB 400]
 gi|114335140|gb|ABI72522.1| TPR repeat-containing protein [Shewanella frigidimarina NCIMB 400]
          Length = 701

 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 47/146 (32%), Gaps = 25/146 (17%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
             L +  S+ +   +     +S+         +   ++  ++A    ++  FS+A E F 
Sbjct: 322 LTLMLSPSLLLATAMTLSLANSQPAQASVWQGLWKTKD--QQAQSAFEQGEFSQAAETFE 379

Query: 82  QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
                        +     A  QY AG YQQA    E+         +     Y  G + 
Sbjct: 380 N-----------PQWQ---ASAQYKAGNYQQALEGFEQ--------DSSAQGLYNQGNAL 417

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVE 167
              + D     +  +  +   S+  E
Sbjct: 418 M-QLEDYQEAIKRYQQAIAAQSQFTE 442


>gi|326435520|gb|EGD81090.1| tetratricopeptide protein [Salpingoeca sp. ATCC 50818]
          Length = 819

 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 31/232 (13%), Positives = 65/232 (28%), Gaps = 55/232 (23%)

Query: 60  VYEK-AVLFLKEQNFSKAYEYFNQ--------CSRDFPFAGVARKSLLMSAFVQYSAGKY 110
           +Y      +  +  + +A  Y+++             P                   G Y
Sbjct: 314 LYNNLGNAYFSKGAYDRAIHYYDKALAIKVETLGEKHPSTAETYN---NLGNAYARKGDY 370

Query: 111 QQAASLGEEYI-----TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM-SR 164
            +A  L E+ +     T   +  +    Y  +G +YA    D        +  L      
Sbjct: 371 DKAIELYEKALAIKVETLGEKHPSTAETYNNLGSAYASK-GDYDRAIAFYEKDLAITVET 429

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL------- 217
           + E++ ++              N L       G  Y  +G Y  AI  ++  L       
Sbjct: 430 LGEKHPSTADT----------YNNL-------GNAYYSKGAYDRAIHFYEKALAITAEAL 472

Query: 218 -ANYSDAEHAEEAMARLVEAYVALALMDEA----REVVS----LIQERYPQG 260
              +         +     AY      D A     + ++    ++ +++P  
Sbjct: 473 GEKHPSTAQTYNNLGI---AYKNKGEYDRAIAFYEQALAITVEVLGKKHPST 521



 Score = 35.5 bits (81), Expect = 7.2,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 70/242 (28%), Gaps = 69/242 (28%)

Query: 55  RYQREVYEK-AVLFLKEQNFSKAYEYFNQ--------CSRDFPFAGVARKSLLMSAFVQY 105
               E Y      + ++ ++ KA E + +             P                 
Sbjct: 351 PSTAETYNNLGNAYARKGDYDKAIELYEKALAIKVETLGEKHPSTAETYN---NLGSAYA 407

Query: 106 SAGKYQQAASLGEEYITQ--------YPESKNVDY-----VYYLVGMSYAQMIRDVPYDQ 152
           S G Y +A +  E+ +          +P + +  Y      YY  G +Y + I       
Sbjct: 408 SKGDYDRAIAFYEKDLAITVETLGEKHPSTADT-YNNLGNAYYSKG-AYDRAIHFYEKAL 465

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
             T   L       E++ ++     A+ Y            + I   Y  +GEY  AI  
Sbjct: 466 AITAEALG------EKHPST-----AQTY----------NNLGIA--YKNKGEYDRAIAF 502

Query: 213 FQLVL--------ANYSDAEHAEEAMARLVEAYVALALMDEA----REVVSL----IQER 256
           ++  L          +            L  AY       +A     +  ++    + E+
Sbjct: 503 YEQALAITVEVLGKKHPSTAQTY---NNLGNAYKNKGDYGKAIECYEKARAVYVEALGEK 559

Query: 257 YP 258
           +P
Sbjct: 560 HP 561


>gi|322495645|emb|CBZ30951.1| MAP kinase kinase-like protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 1343

 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 15/139 (10%), Positives = 44/139 (31%), Gaps = 33/139 (23%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEE 119
           E+     K   + +A  Y+ Q     P +      +S     F  ++  +++++A+   +
Sbjct: 49  EEGNEAFKAGRYHEAIRYYTQAIEVDPDSEFLYTNRS-----FAYFNIKEFEKSAADAAK 103

Query: 120 -------YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
                  +   +          Y +G++   +  D  +   + +               S
Sbjct: 104 AVEINANFFKGH----------YRLGLAQMSL-NDFGHAMESLRKAWALA-------P-S 144

Query: 173 PYVKGARFYVTVGRNQLAA 191
              +  R  +    +++A 
Sbjct: 145 ENKEAIRVAMAKCESKMAR 163


>gi|295689557|ref|YP_003593250.1| peptidase M48 Ste24p [Caulobacter segnis ATCC 21756]
 gi|295431460|gb|ADG10632.1| peptidase M48 Ste24p [Caulobacter segnis ATCC 21756]
          Length = 478

 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 11/89 (12%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           N   A   + +    FP A  AR      A   Y      ++  L +  I  +P++    
Sbjct: 272 NPQVALMKYKETDASFP-ARYAR------AIAYYQMKDPDRSLKLIDALIADHPDNP--- 321

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           Y++ L G    +  R +   +   +  +Q
Sbjct: 322 YLWELKGQVLFEFNR-ITLAEEPQRKSVQ 349


>gi|193212037|ref|YP_001997990.1| TPR repeat-containing protein [Chlorobaculum parvum NCIB 8327]
 gi|193085514|gb|ACF10790.1| Tetratricopeptide TPR_2 repeat protein [Chlorobaculum parvum NCIB
           8327]
          Length = 201

 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 52/163 (31%), Gaps = 37/163 (22%)

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           ++ L          ++ +A    +  I   P    +D  Y  +G +Y             
Sbjct: 49  RAYLNLGREYARQQRFDEAIESYQRAIKIEPG---LDEAYSGLGAAYFNKE--------- 96

Query: 155 TKLMLQYMSRIVERYTNSPYVKG---ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
                              Y       +  V +  +       ++G  Y +   Y  A+ 
Sbjct: 97  ------------------EYAAALPWMQKRVGIAPDDSLRH-FDLGNVYYQLKRYDEALD 137

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
            +Q  + N   +   +EA   +   Y+    +DEAR++++ +Q
Sbjct: 138 SYQKAIDN---SYSFQEAYYTMGMCYLQQGKIDEARKILTWLQ 177


>gi|94967944|ref|YP_589992.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94549994|gb|ABF39918.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
           Ellin345]
          Length = 324

 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 13/91 (14%), Positives = 28/91 (30%), Gaps = 16/91 (17%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL-----MSAFVQYSAGKYQ 111
            ++V   A   L    + +A     +  +         +S +           Y  G Y 
Sbjct: 14  PQKVIADAHRQLDHGQYDEAIVQLQKLQQ--------EQSAIEGLVREIGIAYYKKGDYL 65

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
            A    ++      +++       L+G+SY 
Sbjct: 66  SAIRYLKQATK---QNEKDSEAVQLLGLSYY 93


>gi|332307031|ref|YP_004434882.1| Tetratricopeptide TPR_1 repeat-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
 gi|332174360|gb|AEE23614.1| Tetratricopeptide TPR_1 repeat-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
          Length = 660

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 11/87 (12%), Positives = 27/87 (31%), Gaps = 21/87 (24%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL-LMSAFVQYSA------------- 107
           ++     + +N++ A E+F            A K+    +A   +               
Sbjct: 365 QQGQQAFQAENYNAAAEHFEDPMWR---GAAAYKAQDYDAALAAFQQAKGAQARYNEGNT 421

Query: 108 ----GKYQQAASLGEEYITQYPESKNV 130
               GK  +A    ++ +   P  ++ 
Sbjct: 422 LAQLGKLDEAIEAYDKALEIDPAHEDA 448


>gi|325852031|ref|ZP_08171114.1| tetratricopeptide repeat protein [Prevotella denticola CRIS 18C-A]
 gi|325484587|gb|EGC87503.1| tetratricopeptide repeat protein [Prevotella denticola CRIS 18C-A]
          Length = 1122

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 20/50 (40%)

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
            + V  +Y D E  ++    L   Y+       A   V+ +  +YP+  W
Sbjct: 617 LRRVSDDYPDYEQMDDVYYHLYLLYMRKGDQQMADSYVTRLSRKYPKSKW 666


>gi|322700636|gb|EFY92390.1| NADPH oxidase regulator NoxR [Metarhizium acridum CQMa 102]
          Length = 533

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 13/102 (12%), Positives = 31/102 (30%), Gaps = 18/102 (17%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
            A+       F  A   F++ +          K L     +  + G++++A    +  I 
Sbjct: 12  AALARYDNNEFDDALGEFDKIAD-------TSKILFNMGVIHATLGEHEKAVECYQRAIR 64

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
                + +   Y+  G+S   +           +  L   + 
Sbjct: 65  L---DQYLAVAYFQQGVSNFLL--------GDFEEALANFND 95


>gi|301759847|ref|XP_002915760.1| PREDICTED: aspartyl/asparaginyl beta-hydroxylase-like [Ailuropoda
           melanoleuca]
          Length = 747

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 23/79 (29%), Gaps = 17/79 (21%)

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
             +   +  L     +V +Y  SP  +  +       + LA K         +R   V  
Sbjct: 341 RKRGKIEEALSAFQELVRKYPQSPRARYGKA---QCEDDLAEK---------RRSNEV-- 386

Query: 210 IPRFQLVLANYSDAEHAEE 228
               +  +  Y +     +
Sbjct: 387 ---LRGAIETYQEVASLPD 402


>gi|198434475|ref|XP_002126132.1| PREDICTED: similar to CG6915 CG6915-PA [Ciona intestinalis]
          Length = 1834

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 56/159 (35%), Gaps = 21/159 (13%)

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPE-SKNVDYVYYLVGMSYAQMIRDVPYDQR 153
           ++L    +  +S G +  A     E I+   + + +V             + +    D  
Sbjct: 604 RALYNLGYAYFSLGDHASAVDCYNECISVASQCNDDVTMA---RAFCNLGLAK---KDLG 657

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
                L++  + +E    S  ++ AR       N        IG  Y +R E   A+  +
Sbjct: 658 DLDAALEFQKKFLE---TSLEIRSARGVFKALGN--------IGDLYFERKELDDAVKFY 706

Query: 214 QLVLANYSDAEH---AEEAMARLVEAYVALALMDEAREV 249
           Q  L    + ++     +A A L  A   +   ++A E+
Sbjct: 707 QQQLETAQENKNPVLTAQACASLAIALRLMGEKEKAVEI 745


>gi|195112913|ref|XP_002001016.1| GI10560 [Drosophila mojavensis]
 gi|193917610|gb|EDW16477.1| GI10560 [Drosophila mojavensis]
          Length = 450

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 3/69 (4%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            +A+ +LK  N+  A +    C R  P      K+LL  A   Y+ G  +++  + +  +
Sbjct: 241 NRAISYLKLNNYLLAIKDCEACLRLEPDN---VKALLRLADANYNQGYRRESYGIYQRVL 297

Query: 122 TQYPESKNV 130
              P + + 
Sbjct: 298 ELEPNNASA 306



 Score = 35.9 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 22/145 (15%), Positives = 45/145 (31%), Gaps = 13/145 (8%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
             L  V   +Y  +   +   + K + +  A   + +     P    A +S    A    
Sbjct: 190 AKLSQVEREQYAEKFRLRGNEYFKAKEYENAVREYTRAITFDP--AQAARSYNNRAISYL 247

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
               Y  A    E  +   P++        +  +     + D  Y+Q   +       R+
Sbjct: 248 KLNNYLLAIKDCEACLRLEPDN--------VKAL---LRLADANYNQGYRRESYGIYQRV 296

Query: 166 VERYTNSPYVKGARFYVTVGRNQLA 190
           +E   N+   K +   +     +LA
Sbjct: 297 LELEPNNASAKKSLEQLRQQVGELA 321


>gi|159467379|ref|XP_001691869.1| HSP70-HSP90 organizing protein [Chlamydomonas reinhardtii]
 gi|158278596|gb|EDP04359.1| HSP70-HSP90 organizing protein [Chlamydomonas reinhardtii]
          Length = 567

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 42/131 (32%), Gaps = 13/131 (9%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           EK     KEQ + +A + + +  +  P      A K     A      G Y +     ++
Sbjct: 378 EKGNTAFKEQRYPEAVQAYQEALKRGPPAVNPEAYKLYSNLAACYTKLGAYPEGVKAADK 437

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            I   P     D+     G         + Y  +     ++  ++ +E   +S  ++   
Sbjct: 438 CIELKP-----DFA---KG---YSRKGTLQYFMKEYDKAIETYNKGLELEPDSTELQEGL 486

Query: 180 FYVTVGRNQLA 190
                  ++ A
Sbjct: 487 QRAVEAISRFA 497


>gi|156839553|ref|XP_001643466.1| hypothetical protein Kpol_1006p4 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114078|gb|EDO15608.1| hypothetical protein Kpol_1006p4 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 732

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 41/132 (31%), Gaps = 20/132 (15%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGE 118
           Y    + +   +++ AYE F Q                      + Y   +Y+ A     
Sbjct: 290 YHLGRIHMIRSDYNAAYEAFQQAVNRDARNPIFWC-----SIGVLYYQIYQYRDALDAYT 344

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
             I   P    +  V+Y +G +  +   +   D       L    +      ++ +++  
Sbjct: 345 RAIRLNP---YISEVWYDLG-TLYETCNNQLTD------ALDAYKQAARLEPDNTHIRE- 393

Query: 179 RFYVTVGRNQLA 190
              +    NQL+
Sbjct: 394 --RLDALTNQLS 403


>gi|217972769|ref|YP_002357520.1| tetratricopeptide repeat-containing protein [Shewanella baltica
           OS223]
 gi|217497904|gb|ACK46097.1| Tetratricopeptide TPR_2 repeat protein [Shewanella baltica OS223]
          Length = 692

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 22/58 (37%), Gaps = 14/58 (24%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++A+   + Q+++ A + F                       QY AG Y+QA    E+
Sbjct: 359 QQAMQAYQSQDYANAAKQFESPQWR--------------GSAQYKAGDYEQALKTFEQ 402



 Score = 35.5 bits (81), Expect = 8.4,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 22/65 (33%), Gaps = 7/65 (10%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN-QCSRD--FPFAGVARKS 96
           +    +  L +       + +Y +    ++     KA E +     +   FP    A K+
Sbjct: 389 KAGDYEQALKTFEQDSSAQGLYNQGNALMQLGKPDKAKERYQAALEKQADFP----AAKA 444

Query: 97  LLMSA 101
            L  A
Sbjct: 445 NLELA 449


>gi|158521254|ref|YP_001529124.1| hypothetical protein Dole_1241 [Desulfococcus oleovorans Hxd3]
 gi|158510080|gb|ABW67047.1| protein of unknown function DUF181 [Desulfococcus oleovorans Hxd3]
          Length = 575

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 9/57 (15%), Positives = 21/57 (36%), Gaps = 18/57 (31%)

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV-----------------YYLVGM 139
             F  +   ++++A    ++ I+  P S  +DY                  YY++ +
Sbjct: 501 MGFCHFKRQEHEKAIDCFKKVISLNPGS-AIDYANIGVNYRALGNMEKAVQYYMMAL 556


>gi|221134893|ref|ZP_03561196.1| putative unknown membrane associated protein [Glaciecola sp.
           HTCC2999]
          Length = 438

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 27/71 (38%), Gaps = 1/71 (1%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
            + +    + +   Q  ++  A L L + N+  +  +  +         V  K L + A 
Sbjct: 116 KKVIEEPGIPESFEQSTLFTLAQLSLMQGNYKDSIHFLERWEYLNV-GDVPPKHLFIKAQ 174

Query: 103 VQYSAGKYQQA 113
             Y   +Y+QA
Sbjct: 175 AYYQDKQYEQA 185


>gi|109094549|ref|XP_001110757.1| PREDICTED: tetratricopeptide repeat protein 38-like isoform 1
           [Macaca mulatta]
          Length = 439

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 47/148 (31%), Gaps = 29/148 (19%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQ----------REVYEKAVLFLKEQNFSKAYEYF 80
               L+G       D  LD       +           +++  AV    + NF KA E +
Sbjct: 72  TGLVLIGTGSSVKLDKELDLAVKTMVEISRTQPLTRREQLHVSAVETFAKGNFLKASELW 131

Query: 81  NQCSRDFPFAGVARKSLLMSA-----FVQYSAGKYQQAASLGEEYITQYPE-SKNVDYVY 134
            Q  RD P          M A      V +  G  +Q           YP  + ++    
Sbjct: 132 EQILRDHPTD--------MLALKFSHDVYFYLGCQEQMRDSVAR---VYPFWTPDIPLSS 180

Query: 135 YLVGMSYAQMIRDVPYDQ--RATKLMLQ 160
           Y+ G+    ++    YD+  +  K  L 
Sbjct: 181 YVKGIYSFGLMETNFYDRAEKLAKEALS 208


>gi|90021388|ref|YP_527215.1| TPR domain-containing protein [Saccharophagus degradans 2-40]
 gi|89950988|gb|ABD81003.1| TPR repeat [Saccharophagus degradans 2-40]
          Length = 658

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 9/64 (14%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           KAV   K++N+ +A E FNQ +    +      + L          KY +A +  +E ++
Sbjct: 385 KAVSEYKQKNYEQAAELFNQNTATDLYNRANALTQLE---------KYDEAIAAYDEALS 435

Query: 123 QYPE 126
           Q P 
Sbjct: 436 QNPN 439


>gi|332140757|ref|YP_004426495.1| TPR domain protein [Alteromonas macleodii str. 'Deep ecotype']
 gi|327550779|gb|AEA97497.1| TPR domain protein [Alteromonas macleodii str. 'Deep ecotype']
          Length = 667

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 16/123 (13%), Positives = 37/123 (30%), Gaps = 31/123 (25%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++A+   +   +  A   F+                L  A   Y +G+Y++A +  E  I
Sbjct: 389 QEALNSYQRGKYKDAVSQFDD--------------KLWKASSLYKSGEYERALAAFEN-I 433

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              P         Y  G + A++           +  ++   R ++   +          
Sbjct: 434 ---PG----PESLYNQGNALAKL--------GKLEKAIEKYERALQEAPDFEDA-KTNKK 477

Query: 182 VTV 184
           +  
Sbjct: 478 IIE 480


>gi|327312382|ref|YP_004327819.1| hypothetical protein HMPREF9137_0067 [Prevotella denticola F0289]
 gi|326945155|gb|AEA21040.1| tetratricopeptide repeat protein [Prevotella denticola F0289]
          Length = 1122

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 20/50 (40%)

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
            + V  +Y D E  ++    L   Y+       A   V+ +  +YP+  W
Sbjct: 617 LRRVSDDYPDYEQMDDVYYHLYLLYMRKGDQQMADSYVTRLSRKYPKSKW 666


>gi|317478699|ref|ZP_07937853.1| hypothetical protein HMPREF1007_00969 [Bacteroides sp. 4_1_36]
 gi|316905129|gb|EFV26929.1| hypothetical protein HMPREF1007_00969 [Bacteroides sp. 4_1_36]
          Length = 1056

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 75/230 (32%), Gaps = 36/230 (15%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSA 101
           +R   L +  D      +Y +   +L ++ +  A +Y      +D         +L+  +
Sbjct: 452 NRPKELPADFDWNSTYGLYMQGKDWLNQKMYGNAEKYLKAALEKD----VYFIPALVSLS 507

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
            + Y  G Y  A  L +  ++        +Y+Y   G+                      
Sbjct: 508 SLYYKKGMYLDACELVKRVLSLDTYHGEANYLY---GLC--------SRAMGNLADAKDG 556

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
            S +                      + AA E ++G  Y++   +  A       L    
Sbjct: 557 FS-VATFSPGF---------------RTAAYE-QLGELYMREENWEKAEQYALKSLEYNQ 599

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
              +A++ +  L   Y      ++A   +  + E+ P  +W R+ E L++
Sbjct: 600 MNLYAKQLLIVL---YRKSNHAEKALSEIEKMTEQLPLLHWVRFEEYLLE 646


>gi|307131408|ref|YP_003883424.1| hypothetical protein Dda3937_04037 [Dickeya dadantii 3937]
 gi|306528937|gb|ADM98867.1| conserved protein [Dickeya dadantii 3937]
          Length = 389

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 57/184 (30%), Gaps = 34/184 (18%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              ++    + +A E F Q   +  F   A +  L+      S   +  A    E+ +  
Sbjct: 114 GRDYMVAGLYDRAEEIFKQLVDEEDFRVSALQ-QLLQI--HQSTSDWPNAIDTAEKLVKL 170

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
                                       Q  +++   Y  + ++    S  +  A   + 
Sbjct: 171 -------------------------GKTQLRSEIAHFYCEQSLQAM-GSDDLDKAMTMLK 204

Query: 184 ---VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
                 NQ A   + +GR Y+ +  Y  A+   + VL    D E   E +  L E Y  L
Sbjct: 205 KASAADNQCARVSIMLGRIYMAQQNYAQAVAVLEQVLQ--QDMELVSETLPMLQECYRHL 262

Query: 241 ALMD 244
              +
Sbjct: 263 QQPE 266


>gi|291539579|emb|CBL12690.1| hypothetical protein RO1_21780 [Roseburia intestinalis XB6B4]
          Length = 384

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 71/249 (28%), Gaps = 59/249 (23%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
            +A   L         +  L+   D R      +  +  ++  ++  A   FN       
Sbjct: 1   MVAGAVLFAALFTGCTNERLEDELDFR------KIGINSMQSGDYEGAVAAFNSALSQCV 54

Query: 89  FAGVARKSLLMSAF----VQYSAGKYQQAASLGEEYITQYPESKNVDY------VYYLVG 138
                  + L   +     QY+ G  + A +  +  I         DY       YYL G
Sbjct: 55  GKI--TDTELDICYYKAAAQYAGGDIEGALATYQAMI---------DYDEENGNAYYLHG 103

Query: 139 -MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN------SPYVKGARFYVTVGRNQLAA 191
            +S  Q   D            +  +  V+   +        Y   A   +T    +   
Sbjct: 104 CLSLKQQDTDT---------AKKDFANAVKYNPDDYELYVGIYENLAGNNMTEEGEEYLN 154

Query: 192 KEVEI-----------GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
           K  +I           GR Y   G+Y  A+   +  +        + +A   L + Y A 
Sbjct: 155 KAFDIKGNSAENLTWRGRIYYLLGQYDNAVKELEGAVKK-----DSAKANLYLAQVYEAE 209

Query: 241 ALMDEAREV 249
                A + 
Sbjct: 210 EDSANAEKY 218


>gi|260439095|ref|ZP_05792911.1| putative tetratricopeptide repeat-containing domain protein
           [Butyrivibrio crossotus DSM 2876]
 gi|292808407|gb|EFF67612.1| putative tetratricopeptide repeat-containing domain protein
           [Butyrivibrio crossotus DSM 2876]
          Length = 460

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 51/131 (38%), Gaps = 11/131 (8%)

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
           Y   +  +SY     D  +D    +L    ++++      S Y       +    N  A 
Sbjct: 327 YAGLIDAVSYYL---DDDFDNTMVELAKIDVTKLPTDKAKSLYTL-----LDENCNSGAE 378

Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
             ++ G     + +Y+ A+   + +  +Y     ++EA+  L  ++  L   D+ +E   
Sbjct: 379 TYLKAGSNAYDKSDYITAV---KYLELSYKFNSESDEAIYYLAMSHFRLNENDKGKEYAD 435

Query: 252 LIQERYPQGYW 262
           +++ ++    +
Sbjct: 436 ILKSKFGNSKF 446


>gi|218885322|ref|YP_002434643.1| hypothetical protein DvMF_0216 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218756276|gb|ACL07175.1| hypothetical protein DvMF_0216 [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 193

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 24/53 (45%), Gaps = 3/53 (5%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           +A   L++  +++A   + Q + + P +    ++ +   +  Y  G Y  A +
Sbjct: 29  RASSLLEQGRYAEAATAYAQVTTENP-SDW--RAGVRHGYALYRQGDYAGARA 78


>gi|196229678|ref|ZP_03128542.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
 gi|196226004|gb|EDY20510.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
          Length = 474

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 74/238 (31%), Gaps = 50/238 (21%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKA--YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           V    ++       L+E    +A                    ++++       + GK +
Sbjct: 98  VNDPEQLLNYGEQLLREGYAPEAGLAAMQRAVEAR----PDDARAVIGLTMAYRTQGKLE 153

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           +A +    +  ++PE           G  +   + +   D    +  L    R++E   N
Sbjct: 154 EARATITPFTEKHPEDP--------RGFFFLATVCNALGDAEGERKALD---RVLELDPN 202

Query: 172 ---------------------SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
                                S   + A    +     LA+    I R   KRG+  AA+
Sbjct: 203 AQQPLGIRFGLNDAEHDPAKESELARWAEERKSWMAYILASN---IAR---KRGDAKAAL 256

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
              +    +Y  A   E+ +  L  A   L    +  ++V +++     G +++ +  
Sbjct: 257 ---KWAEKSYEIAPENEDVVLHLTAA---LGEARDFEKMVRIVKPLVESGKYSKRLNW 308


>gi|195391166|ref|XP_002054234.1| GJ22915 [Drosophila virilis]
 gi|194152320|gb|EDW67754.1| GJ22915 [Drosophila virilis]
          Length = 474

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 35/85 (41%), Gaps = 4/85 (4%)

Query: 44  RDVYLDSVTDVRYQREVYE-KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
            +  L  V D       Y  +AV +LK++N+  A +    C R  P      K+LL  A 
Sbjct: 254 EEYTLAIVYDPAQAARAYNNRAVSYLKKKNYLAAIDDCEACLRLEPDN---VKALLRLAD 310

Query: 103 VQYSAGKYQQAASLGEEYITQYPES 127
             Y  G+ +++    +  +   P +
Sbjct: 311 ANYGQGRRRESYGFYQRVLALEPNN 335



 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 39/129 (30%), Gaps = 16/129 (12%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           +   + K + +  A E +       P    A ++    A        Y  A    E  + 
Sbjct: 239 RGNEYFKAKEYDNAIEEYTLAIVYDP--AQAARAYNNRAVSYLKKKNYLAAIDDCEACLR 296

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
             P++        +  +     + D  Y Q   +    +  R++    N+   K A   +
Sbjct: 297 LEPDN--------VKAL---LRLADANYGQGRRRESYGFYQRVLALEPNNISAKKA---L 342

Query: 183 TVGRNQLAA 191
              R QL  
Sbjct: 343 DELRQQLGE 351


>gi|17228741|ref|NP_485289.1| hypothetical protein alr1246 [Nostoc sp. PCC 7120]
 gi|17130593|dbj|BAB73203.1| alr1246 [Nostoc sp. PCC 7120]
          Length = 173

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 10/82 (12%), Positives = 31/82 (37%), Gaps = 6/82 (7%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYS 106
           S   +   +  Y+      +   + +A E   +          + +  +  +       +
Sbjct: 2   STESLELAKTRYQAGKFAFENGQYREAVENLEKASALVARN--SRLGGEVEIWLVTAYEA 59

Query: 107 AGKYQQAASLGEEYITQYPESK 128
           AG+ + A +L ++ + ++P S+
Sbjct: 60  AGRTEDAIALCQQ-LRRHPHSE 80


>gi|327484037|gb|AEA78444.1| GGDEF family protein [Vibrio cholerae LMA3894-4]
          Length = 648

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 72/212 (33%), Gaps = 32/212 (15%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQ-CSRDFPFAG--VARKSLLMS 100
           D+ L  + D      +Y    L +     +  A +Y N+            +  +     
Sbjct: 196 DLLLSLLPDYVDPSGIYNDVGLLMGTLGQYESALDYLNKALEYRLEQGNPLLIAQVEHSL 255

Query: 101 AFVQYSAGKYQQAASLGEEYITQY--PES--KNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
               +  G+Y+++    E+    +  P +    + YV+  +G +Y ++   V  DQ    
Sbjct: 256 GDTYFKQGRYEESILYFEQ-AKAHLTPANYLFGLAYVHLGLGKAYVELNNFVEGDQ-HLF 313

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             L+Y++          +       +      LA        +  K  +Y  AI      
Sbjct: 314 QALEYVN---------QHKDQHLQGLIYL--SLAQ-----AHF--KEQKYAQAIDYANQA 355

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           +A  S++           +AY+ LA + EA +
Sbjct: 356 VA-ISESASLPR---IKAQAYLQLAKIAEAEQ 383


>gi|307546187|ref|YP_003898666.1| ABC transporter permease [Halomonas elongata DSM 2581]
 gi|307218211|emb|CBV43481.1| ABC-type transport system permease protein [Halomonas elongata DSM
           2581]
          Length = 467

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 30/218 (13%), Positives = 75/218 (34%), Gaps = 49/218 (22%)

Query: 68  LKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAFVQYSAGKYQQA----ASLGEEYI 121
           ++++ +  A E +N   R +P       + S+           +Y+++        E + 
Sbjct: 1   MQKRQWRVAIERWNVLRRLYPNGVAVWVQSSI-----AHRQLKEYEESERLLREAWERF- 54

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS----PYVKG 177
              P + +V        ++    + D+  D  A+   L+ +  + + +            
Sbjct: 55  ---PLNASV--------LAQWSEL-DIDRDDLAS--ALERLKMLRDNFPGHVVGWARAAD 100

Query: 178 ARFYV-----TVGRNQLAAKE--------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
               +      V  N+ A +         V+     +K  ++  A+ R+  V + + D  
Sbjct: 101 VLERLGRHDEAVTMNRHAREHCPDRPLPWVQYAEMAMKARDWPTALERWADVRSRFPD-- 158

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
              +   R  EA  A+  +  +R++   + + Y    W
Sbjct: 159 -HAQGYIRAAEAAEAMGQVRYSRQLK--LAQEY-GNDW 192


>gi|302392828|ref|YP_003828648.1| hypothetical protein Acear_2093 [Acetohalobium arabaticum DSM 5501]
 gi|302204905|gb|ADL13583.1| Tetratricopeptide TPR_2 repeat protein [Acetohalobium arabaticum
           DSM 5501]
          Length = 729

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 67/210 (31%), Gaps = 47/210 (22%)

Query: 48  LDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQY 105
           L    +++ + + Y K A  + ++  ++KA E        D+      ++  L      Y
Sbjct: 283 LKQAVEIKPKIKYYRKLAEFYREQSRYNKAIEAIKEALVLDY------KRGEL-----HY 331

Query: 106 SAGKY-------QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
           + G+         QA S  E  +   P +K      YL  +      R    +    +  
Sbjct: 332 TLGELHLQLQNIDQARSSLERAVNLAPTNKE-----YLERL--FWTYRRSAVNDTMLENA 384

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
              + ++++   N                  A  ++  G  Y K  ++  A+ R+Q  + 
Sbjct: 385 QNTLDKLIDLAPNK-----------------AKYQIYSGDLYRKADKHHQAVHRYQRAI- 426

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEARE 248
                        +L  +Y  L     A +
Sbjct: 427 --QITPEDSWGYIKLARSYEELDRYQIAEQ 454


>gi|301310686|ref|ZP_07216625.1| TPR domain protein [Bacteroides sp. 20_3]
 gi|300832260|gb|EFK62891.1| TPR domain protein [Bacteroides sp. 20_3]
          Length = 707

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 71/225 (31%), Gaps = 52/225 (23%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCS 84
           +  ++AV F+   +   +   + D +T        Y  +  ++L++ +  KA   +N+  
Sbjct: 127 MLVNMAVAFIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAI 186

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL-VGMSYAQ 143
              P+   A  +    A + Y    Y+ A +   E +            YY+  G+   Q
Sbjct: 187 EMDPY--YAP-AYGNRAILHYQMDDYKDALADLNEALRLDTRESG----YYINRGLVRYQ 239

Query: 144 MIR----DVPYDQ----------------------RATKLMLQYMSRIVERYTNSPYVKG 177
           M         YDQ                            ++    ++++  ++     
Sbjct: 240 MNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIEDFDVVIQQEPDN----- 294

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
              Y+      L   E          G+Y  A+  + +VL  Y  
Sbjct: 295 ---YMAYYNRALLRFE---------TGDYRGAVQDYDVVLKQYPT 327


>gi|295133311|ref|YP_003583987.1| TPR repeat-containing protein [Zunongwangia profunda SM-A87]
 gi|294981326|gb|ADF51791.1| TPR repeat-containing protein [Zunongwangia profunda SM-A87]
          Length = 264

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 15/129 (11%), Positives = 34/129 (26%), Gaps = 32/129 (24%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y     +L    + +A +Y      D     +A  +            + ++A       
Sbjct: 145 YNAGFAYLYTGKYQEAIDYLEDFKSDDE--ILAPLATGGIGDAFMQLEQPEEALD----- 197

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVP-----------YDQRATKLMLQYMSRIVERY 169
                        YY+   +  +                  +    +  L+Y++++   Y
Sbjct: 198 -------------YYVKA-ANMRSNSFTTPKFLLKAAITALEVGNAEDALKYLNKLENEY 243

Query: 170 TNSPYVKGA 178
             SP    A
Sbjct: 244 PESPEAGEA 252


>gi|164519037|ref|NP_945318.2| transmembrane and TPR repeat-containing protein 1 [Mus musculus]
          Length = 942

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 60/212 (28%), Gaps = 51/212 (24%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A     +    +A  ++    + +P    A  +L              +A    ++ 
Sbjct: 547 YNYANFLKDQGRNKEAIYHYRTALKLYP--RHAS-ALNNLG---TLTKDMAEAKMYYQKA 600

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +  +P+        + +G        ++   Q  T+  +  +   ++   +      A  
Sbjct: 601 LQLHPQHNR---ALFNLG--------NLLKSQEKTEEAIMLLKESIKYGPD---FADAYS 646

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF--------------------QLVLANY 220
            +      LA +E    R+      Y A I                       +  +A+Y
Sbjct: 647 SLASL---LAEQE----RFKEAEDIYQAGIKNCPDSSDLHNNYAVFLVDSGFPEKAVAHY 699

Query: 221 SD----AEHAEEAMARLVEAYVALALMDEARE 248
                 +     A+  L   Y +L    +A E
Sbjct: 700 QQAIQLSPSHHVAVVNLGRLYRSLGENSKAEE 731


>gi|119510808|ref|ZP_01629934.1| hypothetical protein N9414_04020 [Nodularia spumigena CCY9414]
 gi|119464571|gb|EAW45482.1| hypothetical protein N9414_04020 [Nodularia spumigena CCY9414]
          Length = 240

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 42/138 (30%), Gaps = 21/138 (15%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           A+   ++ N+++A     Q     P        + L+      + +G+  +A       +
Sbjct: 49  ALSSARQGNYTEAIALLTQLIDRRPQNSVNYNNRGLI-----YFQSGEMPKALGDYNTAL 103

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              P   N+   Y      +A                L    R ++   +  YV+     
Sbjct: 104 QLNP---NLASAYNNRANYHAAC--------EEFAAALADYDRAIDLNPS--YVRARINR 150

Query: 182 VTVGRNQLAAKEVEIGRY 199
               R+ LA  E  I  +
Sbjct: 151 GITLRD-LAQYEEAIENF 167


>gi|115433392|ref|XP_001216833.1| mitochondrial precursor proteins import receptor [Aspergillus
           terreus NIH2624]
 gi|114189685|gb|EAU31385.1| mitochondrial precursor proteins import receptor [Aspergillus
           terreus NIH2624]
          Length = 630

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 45/141 (31%), Gaps = 20/141 (14%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGV 92
           +G +  +  D  L    +       Y +A L      F++A + + +     R F F+  
Sbjct: 390 LGNKDAAGDDFELAISHNKDDPDIYYHRAQLHFILGEFAEAAKDYQKSIDLDRSFIFSH- 448

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
                +     QY  G    A +     +  +   ++V  VY            ++  DQ
Sbjct: 449 -----IQLGVTQYKMGSVASAMATFRRSVKNF---EDVPDVY--------NYYGELLLDQ 492

Query: 153 RATKLMLQYMSRIVERYTNSP 173
                 ++   + VE    S 
Sbjct: 493 SNFAEAIEKFDKAVEMEKQSK 513


>gi|38569925|gb|AAR24495.1| TPR-repeat protein [uncultured crenarchaeote DeepAnt-EC39]
          Length = 275

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 52/146 (35%), Gaps = 22/146 (15%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
             + +  +Y +A+ F+++     A  +F +  +  P       +L           KYQ 
Sbjct: 10  KEKTEDLLY-QAMSFMEKGQAKNAISFFKKIIKQEP---KNIDALYNQGLALNQLKKYQD 65

Query: 113 AASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           A +  ++ I   P     +Y       G++ A++          T    +Y ++ ++   
Sbjct: 66  AITCFDKVIKISP-----EYFAAINNRGIALAEL--------GNTDGAFEYYNKAIKINP 112

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEI 196
              Y   A +   V  ++L   E  I
Sbjct: 113 --KYAA-AHYNKGVLYDKLLQHEEAI 135


>gi|123788588|sp|Q3UV71|TMTC1_MOUSE RecName: Full=Transmembrane and TPR repeat-containing protein 1
 gi|74210446|dbj|BAE23402.1| unnamed protein product [Mus musculus]
          Length = 942

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 60/212 (28%), Gaps = 51/212 (24%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A     +    +A  ++    + +P    A  +L              +A    ++ 
Sbjct: 547 YNYANFLKDQGRNKEAIYHYRTALKLYP--RHAS-ALNNLG---TLTKDMAEAKMYYQKA 600

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +  +P+        + +G        ++   Q  T+  +  +   ++   +      A  
Sbjct: 601 LQLHPQHNR---ALFNLG--------NLLKSQEKTEEAIMLLKESIKYGPD---FADAYS 646

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF--------------------QLVLANY 220
            +      LA +E    R+      Y A I                       +  +A+Y
Sbjct: 647 SLASL---LAEQE----RFKEAEDIYQAGIKNCPDSSDLHNNYAVFLVDSGFPEKAVAHY 699

Query: 221 SD----AEHAEEAMARLVEAYVALALMDEARE 248
                 +     A+  L   Y +L    +A E
Sbjct: 700 QQAIQLSPSHHVAVVNLGRLYRSLGENSKAEE 731


>gi|226943993|ref|YP_002799066.1| tetratricopeptide (TPR) repeat and VWA domain-containing protein
           [Azotobacter vinelandii DJ]
 gi|226718920|gb|ACO78091.1| tetratricopeptide (TPR) repeat and VWA domain-containing protein
           [Azotobacter vinelandii DJ]
          Length = 577

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 14/112 (12%), Positives = 29/112 (25%), Gaps = 18/112 (16%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCS----RDFPFAGVA----RKSLLMSAFVQY-------S 106
           ++  + L+     +A   F          +     A    R +    A   Y        
Sbjct: 356 QQGRILLQAGRPGEAARRFEDSQWQGLALYQAGDYAAAAERFAQGQGAAAHYNSGNALAR 415

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
           AG+ + A    E  +   P  +      +   +  A + +       A    
Sbjct: 416 AGEPEAALDAYERALELQPALEA---AQHNKALVEALLRQRQARQPDADGSA 464


>gi|222823243|ref|YP_002574816.1| hypothetical protein Cla_0202 [Campylobacter lari RM2100]
 gi|222538464|gb|ACM63565.1| conserved hypothetical protein [Campylobacter lari RM2100]
          Length = 329

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 42/143 (29%), Gaps = 25/143 (17%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
              D         E+ +KA+    +  F  A E F        +     +S      ++Y
Sbjct: 204 EVKDDSWKKLQSSEILKKAIEETNKNQFEVAKEKFEHLISIH-YKP--ARSTFWLGEIRY 260

Query: 106 SAGKYQQAASLGEEYITQYPESKNV----DYV---YYLVGMSYAQMIRDVPYDQRATKLM 158
               Y  A    ++       S  +    DYV    Y   +S      D   D ++    
Sbjct: 261 KQQDYAGALGFYKK-------SSAISTKGDYVPKLLYHTAISL-----DKVGDPKSANKF 308

Query: 159 LQYMSRIVERYTNSPYVKGARFY 181
            + +      Y +SP  K +   
Sbjct: 309 YKALKT---AYPDSPEAKASPDR 328


>gi|325104627|ref|YP_004274281.1| tetratricopeptide domain protein [Pedobacter saltans DSM 12145]
 gi|324973475|gb|ADY52459.1| tetratricopeptide domain protein [Pedobacter saltans DSM 12145]
          Length = 189

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 35/87 (40%), Gaps = 10/87 (11%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGV--ARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
               +   +FS A  YF +      ++        L +  +  Y A  Y+++ S  ++ I
Sbjct: 11  GQRSMMNGDFSSAANYFEK-----AYSADNSNMNVLYLMGYSAYHANNYRKSISAFDKLI 65

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDV 148
           +  P  +++   YY  G +   + + +
Sbjct: 66  SFKP-DESI--AYYYRGKAKMNLCQQI 89


>gi|193214090|ref|YP_001995289.1| TPR repeat-containing protein [Chloroherpeton thalassium ATCC
           35110]
 gi|193087567|gb|ACF12842.1| TPR repeat-containing protein [Chloroherpeton thalassium ATCC
           35110]
          Length = 361

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 56/171 (32%), Gaps = 20/171 (11%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYE-KAVLFLKEQNFSKAYEYFNQ-CSRDFP 88
           A         + + D Y +++    Y  E+Y+ +  L+ K   +  A   F +       
Sbjct: 154 ARTLTALGLTKDAIDSYNNAIGKEAYDPELYKLRGDLYAKLGFYGDALADFEKALELRDS 213

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
           +A       L  A V    G Y +A       I   P +      YY  G+    +I   
Sbjct: 214 YA----LCYLSRADVYRRLGLYAEAIEDVNVAIKLIPSNPEG---YYYRGLI---LISRG 263

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
            Y Q      ++     + +  N      AR    V  + LA  ++ I  Y
Sbjct: 264 GYPQ-----AIRNFDYALSQDPNYHLAYHAR---GVAHDSLAQYQMSISDY 306


>gi|150007314|ref|YP_001302057.1| TPR repeat-containing protein [Parabacteroides distasonis ATCC
           8503]
 gi|149935738|gb|ABR42435.1| putative exported Tpr repeat-family protein [Parabacteroides
           distasonis ATCC 8503]
          Length = 707

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 71/225 (31%), Gaps = 52/225 (23%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCS 84
           +  ++AV F+   +   +   + D +T        Y  +  ++L++ +  KA   +N+  
Sbjct: 127 MLVNMAVAFIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAI 186

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL-VGMSYAQ 143
              P+   A  +    A + Y    Y+ A +   E +            YY+  G+   Q
Sbjct: 187 EMDPY--YAP-AYGNRAILHYQMDDYKDALADLNEALRLDTRESG----YYINRGLVRYQ 239

Query: 144 MIR----DVPYDQ----------------------RATKLMLQYMSRIVERYTNSPYVKG 177
           M         YDQ                            ++    ++++  ++     
Sbjct: 240 MNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIEDFDVVIQQEPDN----- 294

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
              Y+      L   E          G+Y  A+  + +VL  Y  
Sbjct: 295 ---YMAYYNRALLRFE---------TGDYRGAVQDYDVVLKQYPT 327


>gi|126340092|ref|XP_001366229.1| PREDICTED: similar to FKBP52; 52 kD FK506 binding protein
           [Monodelphis domestica]
          Length = 462

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 34/78 (43%), Gaps = 2/78 (2%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKAYEYF 80
             L    ++A+C L      ++ +    ++  D   ++ ++ +   +L   +F  A + F
Sbjct: 320 LRLASHLNLAMCHLKLHSFSAAVESCNKALELDNNNEKGLFRRGEAYLAVNDFELARDDF 379

Query: 81  NQCSRDFPFAGVARKSLL 98
            +  + +P +  A ++ L
Sbjct: 380 QKVLKLYP-SNKAARTQL 396


>gi|126338705|ref|XP_001363721.1| PREDICTED: similar to FAM10A4 protein [Monodelphis domestica]
          Length = 367

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 29/89 (32%), Gaps = 9/89 (10%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLL 98
                   D + D   +++V   A+  L   N   A E F +  +  P      A+++ +
Sbjct: 100 GDENAEVTDEMIDQANEKKV--AAIDALNSGNLESAIELFTEAIKLNPRLAILYAKRASI 157

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPES 127
                     K   A    +  I   P+S
Sbjct: 158 FI-----KLQKPNAAIRDCDRAIEINPDS 181


>gi|13097417|gb|AAH03447.1| FK506 binding protein 4 [Mus musculus]
          Length = 458

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 17/146 (11%), Positives = 42/146 (28%), Gaps = 30/146 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARKSL-------LMSAFVQYSAGK 109
           E+   + KE  + +A   + +      +         +K         L  A        
Sbjct: 275 ERGTAYFKEGKYKQALLQYKKIVSWLEYESSFSGEEMQKVRALRLASHLNLAMCHLKLQA 334

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           +  A     + +     ++      +  G ++   + D                ++++ Y
Sbjct: 335 FSAAIESCNKALELDSNNEKG---LFRRGEAHL-AVNDFDL-------ARADFQKVLQLY 383

Query: 170 TNSPYVKGARFYVTVG----RNQLAA 191
            ++     A+  + V     R QLA 
Sbjct: 384 PSNK---AAKTQLAVCQQRTRRQLAR 406


>gi|56460107|ref|YP_155388.1| TPR repeat- / von Willebrand factor type A domain-containing
           protein [Idiomarina loihiensis L2TR]
 gi|56179117|gb|AAV81839.1| Uncharacterized protein containing a von Willebrand factor type A
           (vWA) domain and TPR repeats [Idiomarina loihiensis
           L2TR]
          Length = 610

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 6/58 (10%), Positives = 18/58 (31%), Gaps = 8/58 (13%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           + +     ++ ++  A E F+Q          + ++            +Y  A    +
Sbjct: 384 FRQGAALYRDGDYEAAAEAFSQSD--------SAEAQYNLGNALAKQQQYDAAIEAYD 433


>gi|32471191|ref|NP_864184.1| O-linked GlcNAc transferase [Rhodopirellula baltica SH 1]
 gi|32396893|emb|CAD71861.1| probable O-linked GlcNAc transferase [Rhodopirellula baltica SH 1]
          Length = 508

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 10/81 (12%), Positives = 26/81 (32%), Gaps = 11/81 (13%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
             G+ + A +     +  + +  +V          +  + R +  D   +     +  R 
Sbjct: 432 ETGQPELAVAAYRGALALHDDYPDV----------HYNLARILE-DLHRSVEAEHHWRRF 480

Query: 166 VERYTNSPYVKGARFYVTVGR 186
           ++    SP+   A   +   R
Sbjct: 481 LQLSPGSPWADEAHARLEELR 501


>gi|148733182|gb|ABR09249.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 51 [Homo sapiens]
          Length = 1389

 Score = 37.0 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAX 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|312382640|gb|EFR28030.1| hypothetical protein AND_04523 [Anopheles darlingi]
          Length = 380

 Score = 37.0 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 45/143 (31%), Gaps = 26/143 (18%)

Query: 61  YEKAVLFLKEQNFSKAYEYFN----QCSRDFPFAGVARKSL------LMSAFVQYSAGKY 110
           +         + + KA  Y+N    Q +R +P     +         L  A V+    +Y
Sbjct: 240 FRDGDDVRANRRYKKAERYYNFFTNQLNRQYPRERQTQLEQFQLLNCLNQAAVRLRLKEY 299

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
                     +   PE+       Y  G++  +M        R  +  L  + R ++R  
Sbjct: 300 ANVVHACNVALAIDPENTK---ALYRRGLAQNEM--------RNYERALDDLGRALQRLP 348

Query: 171 -----NSPYVKGARFYVTVGRNQ 188
                 S Y +  +  +   + Q
Sbjct: 349 EDKLIQSEYERTRKNLLNYTQQQ 371


>gi|218781367|ref|YP_002432685.1| hypothetical protein Dalk_3529 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218762751|gb|ACL05217.1| Tetratricopeptide domain protein [Desulfatibacillum alkenivorans
           AK-01]
          Length = 451

 Score = 37.0 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 83/261 (31%), Gaps = 44/261 (16%)

Query: 17  YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
           Y+     L +     +   V + +  S++    SV  +     +Y KA   + E    +A
Sbjct: 23  YKFKNLMLAVMAFALLVPGVCFAKADSQESLPLSVRQI-----LY-KAYTAMNENKPGEA 76

Query: 77  YEYFNQCSRDFPFAGVARKSLLMSAFV----QYSAGKYQQAASLGEEYITQYPESKNVDY 132
                +  ++   A    ++  M  F     +Y A  Y+ A +  E+ +   P       
Sbjct: 77  AALLCKFKQNPKNAKDMAEARTMVEFAEGNGRYMAKDYKGAMACFEQAVKSDPN------ 130

Query: 133 VYYLVGMSYAQMIRDVPYD-QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
             Y    S   ++     D  RA +  LQ  +   E+  +  Y   A             
Sbjct: 131 --YSAAWSNMAVLCHEMGDTLRAAQCFLQAYNTAEEKKPDLLYSAAAA------------ 176

Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSD--AEHAEEAMARLVEAYVALALMDEAREV 249
                   +L   +Y  +I  F+ +   +         E     V AY+      +A  +
Sbjct: 177 --------FLMTEQYADSIAAFERLFTEFPQQVTNQWRE---YAVHAYLGSKQPRKALRL 225

Query: 250 VSLIQERYPQGYWARYVETLV 270
           V  +        W R+ E L+
Sbjct: 226 VEYLAVNTEGNEWRRWNEFLL 246


>gi|157738163|ref|YP_001490847.1| TPR repeat-containing protein [Arcobacter butzleri RM4018]
 gi|157700017|gb|ABV68177.1| TPR repeat protein [Arcobacter butzleri RM4018]
          Length = 696

 Score = 37.0 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 47/121 (38%), Gaps = 13/121 (10%)

Query: 4   VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV--- 60
           +L   + I +   Y++  F + IF SI        E Q       + + D +   E+   
Sbjct: 9   MLLFRMEILKKLVYKIL-FGIFIFNSILYANNDLLESQPEIIFETERLLDSQENLEIQVD 67

Query: 61  YEKAVLFLKEQNFSKAYEYFNQ--CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           + KAVL LK+  + +A + F +     + P       SLL      Y  G  + A S   
Sbjct: 68  FNKAVLHLKKGEYEEAIKIFEKTALVIEVP-------SLLNMGIAYYKLGDTETAKSYLN 120

Query: 119 E 119
           +
Sbjct: 121 K 121


>gi|72549273|ref|XP_843506.1| MAP kinase kinase-like protein [Leishmania major strain Friedlin]
 gi|323364023|emb|CBZ13029.1| putative protein kinase [Leishmania major strain Friedlin]
          Length = 1343

 Score = 37.0 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 15/139 (10%), Positives = 44/139 (31%), Gaps = 33/139 (23%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEE 119
           E+     K   + +A  Y+ Q     P +      +S     F  ++  +++++A+   +
Sbjct: 49  EEGNEAFKAGRYHEAIRYYTQAIEVDPDSEFLYTNRS-----FAYFNIKEFEKSAADAAK 103

Query: 120 -------YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
                  +   +          Y +G++   +  D  +   + +               S
Sbjct: 104 AVEINANFFKGH----------YRLGLAQMSL-NDFGHAMESLRKAWALA-------P-S 144

Query: 173 PYVKGARFYVTVGRNQLAA 191
              +  R  +    +++A 
Sbjct: 145 ENKEAIRVAMAKCESKMAR 163


>gi|86133820|ref|ZP_01052402.1| hypothetical protein MED152_03910 [Polaribacter sp. MED152]
 gi|85820683|gb|EAQ41830.1| hypothetical protein MED152_03910 [Polaribacter sp. MED152]
          Length = 978

 Score = 37.0 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 19/147 (12%), Positives = 43/147 (29%), Gaps = 19/147 (12%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
                D+     Y + +Y+ A  ++       A   F +      F   A +  +   ++
Sbjct: 371 EKFPTDTDITYAYNKLMYDTAKNYVASNQDQLALPIFEELVSSPDFQKEAEQ-QIYGIYI 429

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
                KY +A    ++ I   P + +           + +    +  +       L+   
Sbjct: 430 S--QQKYDEATDQIDKLIGLDPNNPD-----------FLRRKSTLYQEMELFDDALEITR 476

Query: 164 RIVERYTNSP-----YVKGARFYVTVG 185
            + + Y  +      YV     Y T  
Sbjct: 477 NLEQNYPLNQTYPALYVDQIEAYATYL 503


>gi|151946827|gb|ABS19060.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 200 [Homo sapiens]
          Length = 1014

 Score = 37.0 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEXHLRLGLMFKVBTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|326435682|gb|EGD81252.1| mbre TPR repeat protein [Salpingoeca sp. ATCC 50818]
          Length = 736

 Score = 37.0 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 34/231 (14%), Positives = 64/231 (27%), Gaps = 55/231 (23%)

Query: 60  VYEK-AVLFLKEQNFSKAYEYFNQ--------CSRDFPFAGVARKSLLMSAFVQYSAGKY 110
           +Y      +  +  + +A + + +             P                YS G Y
Sbjct: 314 LYNNLGAAYADKGEYDRAVQLYEKALAITVEALGEKHPSTADTYN---NLGNAYYSKGDY 370

Query: 111 QQAASLGE-----EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY-MSR 164
            +A +  E        T   +  +    Y  +G++Y     D        +  L   +  
Sbjct: 371 DKAVAFYEKALAIRVETLGEKHPSTAQTYNNLGIAYHSK-GDYDKAIAYHEKALAIKVET 429

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL------- 217
           + E + N+              N L       G  Y  +GEY  AI  ++  L       
Sbjct: 430 LGEHHPNT----------ATTYNNL-------GEAYYSKGEYDRAIGCYEKALTIKVDTV 472

Query: 218 -ANYSDAEHAEEAMARLVEAYVALALMDEARE--------VVSLIQERYPQ 259
              +            L   Y +    D+A +         V  + E++P 
Sbjct: 473 GEKHPSTASTY---GNLGSVYHSKGDYDKAIQLYEKDLAITVEALGEKHPS 520


>gi|258591282|emb|CBE67579.1| putative TPR domain protein [NC10 bacterium 'Dutch sediment']
          Length = 585

 Score = 37.0 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 41/134 (30%), Gaps = 23/134 (17%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA---GVARKSLLMSAFVQYSAGKYQ 111
           RY   ++ +  +  +++ + +A +  +      P           LL   +  +    Y 
Sbjct: 359 RYPDALFHRGYILSQKERYVEAGDLLSIAGSLRPNEGVIPY----LLGLIY--FQQKSYP 412

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           QA +  E  +   P   N  Y  Y +G S  +  R +               R++     
Sbjct: 413 QAIAQLERALGLEPS--NAAY-LYQLG-SAFERSRQID-------KAETIFRRLLTVDPK 461

Query: 172 SPYVKGARFYVTVG 185
                 A  Y+   
Sbjct: 462 H---ADAYNYLGYM 472


>gi|293453834|ref|ZP_06664253.1| cellulose synthase operon protein C [Escherichia coli B088]
 gi|291321960|gb|EFE61391.1| cellulose synthase operon protein C [Escherichia coli B088]
          Length = 1161

 Score = 37.0 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 77/237 (32%), Gaps = 38/237 (16%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 447 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 503

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQY-PESKNVDYVY--YLVG-------MSYAQMIRDV 148
             +   + AG+  QA       + Q+ P      Y Y  YL G       +++   I  +
Sbjct: 504 RLSQDLWQAGQRSQA-DTLMRNLAQHKPNDPEQVYAYGLYLSGHDQDRAALAH---INSL 559

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEI 196
           P  Q         +  +V R   S  V      +   G+   A             ++ +
Sbjct: 560 PRAQWN-----SNIQELVNRL-QSDQVMETANRLRESGKEAEAEAMLRQQPPSTRIDLTL 613

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
             +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 614 ADWAQQRRDYTAARAAYQNVLTLEPT---NADAILGLTEVDIAAGDTAAARSQLAKL 667



 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 60/210 (28%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 360 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 416

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 417 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 462

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 463 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 511

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + +  P      Y   L
Sbjct: 512 AGQRSQADTLMRNLAQHKPNDPEQVYAYGL 541


>gi|158339554|ref|YP_001520943.1| hemagglutination activity domain-containing protein [Acaryochloris
            marina MBIC11017]
 gi|158309795|gb|ABW31411.1| haemagglutination activity domain protein [Acaryochloris marina
            MBIC11017]
          Length = 1756

 Score = 37.0 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 25/72 (34%), Gaps = 7/72 (9%)

Query: 50   SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC-----SRDFPFAGVARKSLLMSAFVQ 104
                 R   ++ E A    ++  + +A  Y+ Q          P A  + +S L  A+  
Sbjct: 942  QGESSRSLPQLLEAARQEYQQAKYPEAITYWTQAVNQLSKSKHPGAYASVQSHLALAYHH 1001

Query: 105  YSAGKYQQAASL 116
               G + +A   
Sbjct: 1002 --LGDWDKAREA 1011


>gi|145219214|ref|YP_001129923.1| TPR repeat-containing protein [Prosthecochloris vibrioformis DSM
           265]
 gi|145205378|gb|ABP36421.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeovibrioides
           DSM 265]
          Length = 201

 Score = 37.0 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 52/164 (31%), Gaps = 33/164 (20%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           ++L          +Y +A    +  +        +D  Y+ +G       +D P      
Sbjct: 53  AMLRLGNAYAQQNRYDEAEETYKNALAL---DPELDAAYHSLGAVSFNR-QDYPR----- 103

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
               ++ SR +ER             +    N L           ++   Y  A   +  
Sbjct: 104 --AREWFSRHLERSPKD------SLRLYDLGNAL-----------MQMKAYDEAADAYSA 144

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI--QERY 257
            + N   +    EA   L   ++    MDEAR++ + +  +  Y
Sbjct: 145 AIDN---SRSFTEAHYNLAVCFIKTGRMDEARQIYNWLLDKNNY 185


>gi|126657794|ref|ZP_01728948.1| hypothetical protein CY0110_26383 [Cyanothece sp. CCY0110]
 gi|126621011|gb|EAZ91726.1| hypothetical protein CY0110_26383 [Cyanothece sp. CCY0110]
          Length = 308

 Score = 37.0 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 5/62 (8%), Positives = 20/62 (32%), Gaps = 9/62 (14%)

Query: 61  YEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +     + ++  + +A        +   D P       +        +  G+  +A ++ 
Sbjct: 125 FTLGNAYFQQGKYQQAATELEEGLKIKSDVP------SAQFDLGNAYFKLGRMGEAIAVY 178

Query: 118 EE 119
           ++
Sbjct: 179 QK 180


>gi|323179519|gb|EFZ65086.1| cellulose synthase operon protein C [Escherichia coli 1180]
          Length = 1157

 Score = 36.6 bits (84), Expect = 3.2,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 77/236 (32%), Gaps = 36/236 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197
             Q         +  +V R   S  V      +   G+   A             ++ + 
Sbjct: 557 RAQWN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 611 DWAQQRRDYTAARAAYQNVLTLEPT---NADAILGLTEVDIAAGDTAAARSQLAKL 663



 Score = 35.9 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + ++ P      Y   L
Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537


>gi|162448624|ref|YP_001610991.1| hypothetical protein sce0354 [Sorangium cellulosum 'So ce 56']
 gi|161159206|emb|CAN90511.1| hypothetical protein predicted by Glimmer/Critica [Sorangium
           cellulosum 'So ce 56']
          Length = 330

 Score = 36.6 bits (84), Expect = 3.2,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 34/99 (34%), Gaps = 11/99 (11%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           AL +  +I +   +G   Q + D   ++    R   E+Y +        ++  A   F +
Sbjct: 6   ALALCAAIVLSAPLGAFAQPAGDKTEEADARFRRGVELYNEV-------DYGAALTEFRR 58

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
                P    A + L   A   Y    Y  A    E Y+
Sbjct: 59  AYELAP----AYQVLYNIAGTCYQLKDYACALRAFERYL 93


>gi|160889656|ref|ZP_02070659.1| hypothetical protein BACUNI_02083 [Bacteroides uniformis ATCC 8492]
 gi|156860648|gb|EDO54079.1| hypothetical protein BACUNI_02083 [Bacteroides uniformis ATCC 8492]
          Length = 993

 Score = 36.6 bits (84), Expect = 3.2,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 75/230 (32%), Gaps = 36/230 (15%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSA 101
           +R   L +  D      +Y +   +L ++ +  A +Y      +D         +L+  +
Sbjct: 389 NRPKELPADFDWNSTYGLYMQGKDWLNQKMYGNAEKYLKAALEKD----VYFIPALVSLS 444

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
            + Y  G Y  A  L +  ++        +Y+Y   G+                      
Sbjct: 445 SLYYKKGMYLDACELVKRVLSLDTYHGEANYLY---GLC--------SRAMGNLADAKDG 493

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
            S +                      + AA E ++G  Y++   +  A       L    
Sbjct: 494 FS-VATFSPGF---------------RTAAYE-QLGELYMREENWEKAEQYALKSLEYNQ 536

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
              +A++ +  L   Y      ++A   +  + E+ P  +W R+ E L++
Sbjct: 537 MNLYAKQLLIVL---YRKSNHAEKALSEIEKMTEQLPLLHWVRFEEYLLE 583


>gi|156540612|ref|XP_001603671.1| PREDICTED: similar to conserved hypothetical protein [Nasonia
           vitripennis]
          Length = 1346

 Score = 36.6 bits (84), Expect = 3.2,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 33/94 (35%), Gaps = 5/94 (5%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM----SAFVQYSAG 108
           D R    +  +  L+    +F KA + F    +  P    ARK +               
Sbjct: 330 DPRNVEGLVARGALYANSGSFKKAIDDFETALKLNPSHANARKYMAETLVALGRSYEDEK 389

Query: 109 KYQQAASLGEEYITQYPESKNVD-YVYYLVGMSY 141
           KY++A    E  ++  P  +     + Y+ G + 
Sbjct: 390 KYEEALKAYENCLSIAPYHEEAKNSIEYIKGKTN 423


>gi|158522865|ref|YP_001530735.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
 gi|158511691|gb|ABW68658.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
           Hxd3]
          Length = 222

 Score = 36.6 bits (84), Expect = 3.2,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 1/59 (1%)

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
           AA   F+ + A    + H E A+  L   Y  +   +++++  + I   YP   +A   
Sbjct: 159 AAADCFETIAAT-PVSAHKETALFNLARLYEQVGETEKSQKAFAQIVSEYPDSMYADIA 216


>gi|219849278|ref|YP_002463711.1| MCP methyltransferase, CheR-type with Tpr repeats [Chloroflexus
           aggregans DSM 9485]
 gi|219543537|gb|ACL25275.1| MCP methyltransferase, CheR-type with Tpr repeats [Chloroflexus
           aggregans DSM 9485]
          Length = 477

 Score = 36.6 bits (84), Expect = 3.2,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 42/142 (29%), Gaps = 23/142 (16%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           +    ++      A E F       P     A   L ++A    + G+   A +     +
Sbjct: 319 EGRRMIESGQIEAALELF----AHAPLAGRYAPAVLALTAQAHANRGELDLALAEARRAL 374

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM--------LQYMSRIVERYTNSP 173
              P    V   + L+G+ Y +  +      R  +          L     + E Y  + 
Sbjct: 375 ELNPL---VTEAHILLGLIYERQ-QQFTLAIRHLERARYLNSDSPLVAFH-LAECYRQTD 429

Query: 174 YVKGARFYVTVGRNQLAAKEVE 195
            V  A   +   RN  A   + 
Sbjct: 430 RVADA---IREYRN--AEHLLH 446


>gi|108764009|ref|YP_633730.1| FHA domain- TPR-repeat-containing protein [Myxococcus xanthus DK
           1622]
 gi|108467889|gb|ABF93074.1| FHA domain/tetratricopeptide repeat protein [Myxococcus xanthus DK
           1622]
          Length = 574

 Score = 36.6 bits (84), Expect = 3.2,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 25/72 (34%), Gaps = 14/72 (19%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSL--LMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
            + +A E  N+C    P      ++   L       +  + ++ A   + ++   P    
Sbjct: 504 RYRQAIEQLNKCLELEP-----TRAECHLYLGSAYANDNQPEKGAVHYKRFLELAPNH-- 556

Query: 130 VDYVYY--LVGM 139
               YY  + G+
Sbjct: 557 ---AYYERVKGL 565


>gi|28868247|ref|NP_790866.1| cellulose synthase operon protein C [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|28851484|gb|AAO54561.1| cellulose synthase operon protein C [Pseudomonas syringae pv.
           tomato str. DC3000]
          Length = 1230

 Score = 36.6 bits (84), Expect = 3.2,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 64/213 (30%), Gaps = 34/213 (15%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++A     +    KA     Q  R  P         L  A VQ  AG+   A +   + +
Sbjct: 290 QEARDLQAKGQTGKAQALLAQAQRQNPDN---IDVRLTLADVQVQAGQLDAAQAGYRQVL 346

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF- 180
                +        + G+      R             + +  +          + A+  
Sbjct: 347 ATQRGNPQA-----IRGLINVLAQRG---------QADEALRLLDTLSP----GEQAKLG 388

Query: 181 ---YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
                   R+       ++ R   +RG+  AA    +  + N  D       +ARL   Y
Sbjct: 389 DSGRFKALRST------QVARLAEQRGDVRAAQVALKDAVKNDPDNVWTRFDLARL---Y 439

Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLV 270
           +      +AR ++  + +  P    A Y   L+
Sbjct: 440 LKTDEAPKARALIDELLKAQPNNIDALYTSALL 472


>gi|27806463|ref|NP_776578.1| peptidyl-prolyl cis-trans isomerase D [Bos taurus]
 gi|2507229|sp|P26882|PPID_BOVIN RecName: Full=Peptidyl-prolyl cis-trans isomerase D; Short=PPIase
           D; AltName: Full=40 kDa peptidyl-prolyl cis-trans
           isomerase; AltName: Full=Cyclophilin-40; Short=CYP-40;
           AltName: Full=Cyclophilin-related protein; AltName:
           Full=Estrogen receptor-binding cyclophilin; AltName:
           Full=Rotamase D
 gi|14277809|pdb|1IHG|A Chain A, Bovine Cyclophilin 40, Monoclinic Form
 gi|14277815|pdb|1IIP|A Chain A, Bovine Cyclophilin 40, Tetragonal Form
 gi|393300|dbj|BAA03159.1| cyclophilin [Bos taurus]
 gi|87578323|gb|AAI13319.1| Peptidylprolyl isomerase D [Bos taurus]
 gi|296478699|gb|DAA20814.1| peptidylprolyl isomerase D [Bos taurus]
          Length = 370

 Score = 36.6 bits (84), Expect = 3.2,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 49/121 (40%), Gaps = 2/121 (1%)

Query: 1   MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQRE 59
           +  V G      +A   +L   AL+   +I  C L   + Q + D  L+++  D    + 
Sbjct: 250 LRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKA 309

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y +A  +   + + +A     +     P    A ++ L+    +  A K ++ A+  + 
Sbjct: 310 LYRRAQGWQGLKEYDQALADLKKAQEIAP-EDKAIQAELLKVKQKIKAQKDKEKAAYAKM 368

Query: 120 Y 120
           +
Sbjct: 369 F 369


>gi|332305582|ref|YP_004433433.1| type IV pilus biogenesis/stability protein PilW [Glaciecola
           agarilytica 4H-3-7+YE-5]
 gi|332172911|gb|AEE22165.1| type IV pilus biogenesis/stability protein PilW [Glaciecola
           agarilytica 4H-3-7+YE-5]
          Length = 329

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 15/114 (13%), Positives = 42/114 (36%), Gaps = 8/114 (7%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           + ++F + +        L     Q+S     D       +  +    + +L+  N+S+A 
Sbjct: 2   KFFRFFVVVLIF----GLSACASQNSGTAVDDFDKQKAAKTRL-SLGLTYLENGNYSQAK 56

Query: 78  EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
              ++      FA          A+   +  + + A+   ++ I+  P++ ++ 
Sbjct: 57  FNLDKALA---FAPNLADVHYGMAYYYQNVEEPESASKAYQKAISLAPKNADIA 107


>gi|326922163|ref|XP_003207321.1| PREDICTED: cartilage-associated protein-like [Meleagris gallopavo]
          Length = 265

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 20/48 (41%), Gaps = 5/48 (10%)

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           F  + A    +A +    ++ ++P+ + +        M+Y + I D  
Sbjct: 15  FAYFKANNLPKAIAAAHTFLLKHPDDEMM-----QRNMAYYKSIPDAE 57


>gi|254784608|ref|YP_003072036.1| response regulator receiver protein [Teredinibacter turnerae T7901]
 gi|237687115|gb|ACR14379.1| response regulator receiver protein [Teredinibacter turnerae T7901]
          Length = 557

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 80/223 (35%), Gaps = 23/223 (10%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFL-----KEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
           D   + +  +  + E Y +A   L     + ++F+ A       +R  P + +  + L  
Sbjct: 230 DSAEEILNSIIEEDERYVEAHDLLAEVHKERKDFAAAQRATENATRVSPKSVLRHRQLAE 289

Query: 100 SAFVQYSAGKYQQAASLGEEYIT--QYPESK-NVDYVYYLVGMSYAQMIRDVPYDQRATK 156
            A         + A    +  I        +   DY  Y   +S      +    +  T+
Sbjct: 290 LAE---QNNDDEIALKSHQNAIRWGFNSCHESEQDYFNYARKVSEVVQGDNSNNAKTLTR 346

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
               ++ R  +R+ + P +   +  +   +  L + E         + +  AA+ + + +
Sbjct: 347 QGHNFLDRARKRFADRPEIA-VQAQLVEIQLHLGSGE---------QKKAEAAVEKAREM 396

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
             + +     E ++  +     A+   DEARE+++ +  R+  
Sbjct: 397 YNDLA-TPPVETSLE-MARTLHAMNNEDEARELLTQLAARHEN 437


>gi|228910825|ref|ZP_04074634.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
          thuringiensis IBL 200]
 gi|228848776|gb|EEM93621.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
          thuringiensis IBL 200]
          Length = 273

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 24/66 (36%)

Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
           +Q+ K  LT   S ++  L     +   +  L          E+ EKA   L+++    
Sbjct: 1  MFQMKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAEILEKAKPLLEKKGIEL 60

Query: 76 AYEYFN 81
            + F 
Sbjct: 61 EIKKFQ 66


>gi|195126158|ref|XP_002007541.1| GI12333 [Drosophila mojavensis]
 gi|193919150|gb|EDW18017.1| GI12333 [Drosophila mojavensis]
          Length = 661

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 28/69 (40%), Gaps = 8/69 (11%)

Query: 38  WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGV---- 92
             R        +SV  +    E+Y +A   ++ Q  ++A E F +     F  A +    
Sbjct: 581 CPRCRKNVSLKESVAKLIKIEELYREAAEAMQAQKTNEAIELFKEGIDAFFQIAALPHKD 640

Query: 93  ---ARKSLL 98
              A+++LL
Sbjct: 641 TLIAQQALL 649


>gi|167043246|gb|ABZ07952.1| putative TPR domain protein [uncultured marine crenarchaeote
           HF4000_ANIW141M12]
          Length = 272

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 52/141 (36%), Gaps = 21/141 (14%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            +++ KA+ F++++    A   F +  +  P       ++           KYQ A +  
Sbjct: 11  EDLFYKAMFFMEKRQPKAAIPLFKKIVKQDP---KNIAAIYNQGLALNQLKKYQDAITCF 67

Query: 118 EEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
           ++ I   P+     Y       G+S A++          T+  L+Y ++ +E        
Sbjct: 68  DKVIEINPK-----YVSAINNRGISLAEL--------GNTEDALEYYNKAIEIDPKH--- 111

Query: 176 KGARFYVTVGRNQLAAKEVEI 196
             A +   V  ++L   E  I
Sbjct: 112 AAAHYNKGVLYDKLLLHEEAI 132


>gi|172035680|ref|YP_001802181.1| hypothetical protein cce_0764 [Cyanothece sp. ATCC 51142]
 gi|171697134|gb|ACB50115.1| unknown [Cyanothece sp. ATCC 51142]
          Length = 294

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 5/62 (8%), Positives = 20/62 (32%), Gaps = 9/62 (14%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +     + ++  + +A     +      D P       +        +  G+  +A ++ 
Sbjct: 125 FTLGNAYFQQGKYKQAATELEEGLNIKSDVP------SAQFDLGNAYFKLGRMGEAIAVY 178

Query: 118 EE 119
           ++
Sbjct: 179 QK 180


>gi|224534068|ref|ZP_03674651.1| TPR domain protein [Borrelia burgdorferi CA-11.2a]
 gi|225548538|ref|ZP_03769586.1| TPR domain protein [Borrelia burgdorferi 94a]
 gi|224512767|gb|EEF83135.1| TPR domain protein [Borrelia burgdorferi CA-11.2a]
 gi|225370801|gb|EEH00236.1| TPR domain protein [Borrelia burgdorferi 94a]
 gi|312149253|gb|ADQ29324.1| TPR domain protein [Borrelia burgdorferi N40]
          Length = 379

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 72/212 (33%), Gaps = 36/212 (16%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           K+ N+ KA  Y+ +C    P       +L        +   Y++A  + EEY+   PE+ 
Sbjct: 70  KKNNYDKAIVYYQKCLVKHPSNNY---ALFGLGDCYRNLDNYKKATDIWEEYLKYDPENI 126

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV--------KGARF 180
               V   V  SY ++        +  +   Q   +++E   ++ Y            + 
Sbjct: 127 T---VLTRVAASYRKL--------KNFQKSKQTYLKVMELMPDNDYALVGIGHLYYDFKE 175

Query: 181 YVTVGRNQLAAKEVE-----------IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
           Y    +  L   E+            IG  Y K  E+   I  F+  L     +     A
Sbjct: 176 YKEALKYWLKMYELNQSKVDVRVLTSIGNCYRKLREFTRGIYFFKKALEI---SPSNFYA 232

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +  L + Y       EA +    I E+ P+  
Sbjct: 233 VFGLADCYRGNKEYKEALKYWLDIIEKDPKNN 264


>gi|153008498|ref|YP_001369713.1| TPR repeat-containing protein [Ochrobactrum anthropi ATCC 49188]
 gi|151560386|gb|ABS13884.1| Tetratricopeptide TPR_2 repeat protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 230

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 42/130 (32%), Gaps = 17/130 (13%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           + + A   + E+ +  A ++ N+     P    A  +    A V +    Y  A      
Sbjct: 113 LMQWANAAMLERRYPSAIDFLNEAIALDP--EYAE-AWNRRATVYFLQKDYAHAMYDINR 169

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +   P          L GM+    +R +       +  L+   + +  Y     ++ A+
Sbjct: 170 TLELEPRHYGA-----LTGMAAILRLRGLK------EQALKAYEQALIVYPM---MRDAQ 215

Query: 180 FYVTVGRNQL 189
                  ++L
Sbjct: 216 KNFNDLADEL 225


>gi|222056431|ref|YP_002538793.1| hypothetical protein Geob_3349 [Geobacter sp. FRC-32]
 gi|221565720|gb|ACM21692.1| conserved hypothetical protein [Geobacter sp. FRC-32]
          Length = 180

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 68/197 (34%), Gaps = 36/197 (18%)

Query: 11  IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE----------- 59
           +F+    +L    L + F+ A+  L+G    S +       T    +RE           
Sbjct: 1   MFKDRFDKLLWLLLFMVFA-ALAMLIGRHTSSGKTNAPAVATSKAMEREMAFQARVTLLQ 59

Query: 60  -VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
            +Y          +   A    ++ +R +P         +M   + + AG  ++A S   
Sbjct: 60  KLYAPVEDLRLRGDMQGALLRLDELNRSYPGEAHG---YIMKGQILHQAGAIEEAVSS-- 114

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR-ATKLMLQYMSRIVERY---TNSPY 174
                        YV  +  +S   + R  P  +R   K +++   +I+ R     ++  
Sbjct: 115 -------------YVQGIK-LSGNYIDRKNPLSRRDDVKRLVEEGQQIIRRARANPDNIS 160

Query: 175 VKGARFYVTVGRNQLAA 191
           +  A   +   R++LA 
Sbjct: 161 LAAAVKNINYLRSRLAG 177


>gi|110597057|ref|ZP_01385346.1| TPR repeat [Chlorobium ferrooxidans DSM 13031]
 gi|110341248|gb|EAT59713.1| TPR repeat [Chlorobium ferrooxidans DSM 13031]
          Length = 573

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 41/266 (15%), Positives = 87/266 (32%), Gaps = 65/266 (24%)

Query: 7   RAICIF-EAWAYQLY-KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKA 64
           R++C    AW + +Y     + F +IA+         + R +  DS+++ + +   +  A
Sbjct: 2   RSLCGAIPAWRHAVYFMLLFSAFLAIALSGCSSEPVVAGRSLKADSLSESKRRE--FVGA 59

Query: 65  VLFLKEQNFSKAYEYFNQCSR--------DFPFAG-------------VARKS-LLMSAF 102
           +L   +     A + +    +        ++  +               + +S  L  + 
Sbjct: 60  LLLNIKGEHRAAVDRYRALLKSDASTPAINYALSRSFYSIGVSDSARFYSERSVKLDPSN 119

Query: 103 VQY---------SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
             Y             Y  AA L +  +T  P             +S    +  +  DQ 
Sbjct: 120 TYYLRYLAELSHQMTDYTYAAELYQRLVTLEPGRPE--------NLSLL-AVEYLSADQ- 169

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR-----------NQLAA----KE---VE 195
             +  L     I+     +     A+  +   +           N+L      KE   + 
Sbjct: 170 -PEKALAVFQEILRIDPKNE-TTQAQVLLLEIKLRHYQNAIGTLNELVEQGDGKEKLRLT 227

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYS 221
           +G  YL+ G+Y +A   F+ V+ +  
Sbjct: 228 LGELYLQTGQYESAFKSFRDVIDDNP 253


>gi|90418691|ref|ZP_01226602.1| conserved hypothetical protein [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90336771|gb|EAS50476.1| conserved hypothetical protein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 360

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 35/100 (35%), Gaps = 9/100 (9%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           Y  A  I   +    +VGW+R  +               + Y  A+   ++    +A   
Sbjct: 29  YILAAVILVVVITAAVVGWDRYQT--------AQANASGDAYLAALQLARDGKPDEAITA 80

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            +  + D  +      + +    V  + GK+ +A +  ++
Sbjct: 81  LDALAAD-SYGAYPDLARMSIGGVYQAQGKFDEAVAAFDK 119


>gi|26342579|dbj|BAC34946.1| unnamed protein product [Mus musculus]
          Length = 721

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 34/99 (34%), Gaps = 20/99 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYF--------NQCSRDFPFAGVARKS-----LLMSAFVQYSAG 108
              ++ + +    +A   F                    A KS     L     + +  G
Sbjct: 566 NTGIILMNQGKTEEARRTFLKCSEIPDENLKD-----PHAHKSSVTSCLYNLGKLYHEQG 620

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYY-LVGMSYAQMIR 146
           +Y++A S+  E I + P         Y ++G +Y ++ +
Sbjct: 621 RYEEALSVYREAIQKMPRH-FAPQSLYNMMGEAYMRLSK 658


>gi|332705486|ref|ZP_08425564.1| hypothetical protein LYNGBM3L_07980 [Lyngbya majuscula 3L]
 gi|332355846|gb|EGJ35308.1| hypothetical protein LYNGBM3L_07980 [Lyngbya majuscula 3L]
          Length = 810

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 27/66 (40%), Gaps = 3/66 (4%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           +A   L+E    +A + F Q  + +P +     + +  A      G   QA    ++ + 
Sbjct: 85  RAFNLLREGRVEEAIKEFEQAVQRYPQS---IDAKIGLAIAYRRQGLIDQAWDAYQQVLA 141

Query: 123 QYPESK 128
           Q P ++
Sbjct: 142 QDPTNE 147


>gi|332665441|ref|YP_004448229.1| sporulation domain-containing protein [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332334255|gb|AEE51356.1| Sporulation domain-containing protein [Haliscomenobacter hydrossis
           DSM 1100]
          Length = 687

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 16/122 (13%), Positives = 43/122 (35%), Gaps = 32/122 (26%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQ--CSRDFPFAGVARKSLLMSAFVQYSAGKY 110
           + +  +++  +      + N+ +A ++F +       P      +++  +    Y    Y
Sbjct: 19  NAQTAKKLMRQGEDAFTKGNYVQAADFFEKSWVKGKKP------EAVFKAGEAYYLLRNY 72

Query: 111 QQAASLG-------EEYITQYPESKNVDYVYYLVGMSYAQMI-RDVPYDQRATKLMLQYM 162
           ++A+          +++    P          LVG+ YA+ + +D  YD+          
Sbjct: 73  RKASEAYLNVKDKNDQF----P----------LVGLKYARSLKQDGQYDK--ASKAFSDF 116

Query: 163 SR 164
             
Sbjct: 117 RD 118


>gi|148733166|gb|ABR09241.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 38 [Homo sapiens]
          Length = 1269

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 38/141 (26%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y          DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYXL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|300786250|ref|YP_003766541.1| hypothetical protein AMED_4366 [Amycolatopsis mediterranei U32]
 gi|299795764|gb|ADJ46139.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
          Length = 1052

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 18/137 (13%), Positives = 39/137 (28%), Gaps = 17/137 (12%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           +A+      N   A   F +     P A    +     A   + AG+  +A +  +  I 
Sbjct: 774 RALAHRDSGNHGLAMADFARALEINPEADWIFR---DRAQTHHLAGRLAEALADYDRTIE 830

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
                    +      +        V  D    +  L  ++R+ E    + +        
Sbjct: 831 L---DPEYSWAVRQRAL--------VLRDLGRLEEALTSLTRLAEADPATAWRW--CDRG 877

Query: 183 TVGRNQLAAKEVEIGRY 199
            +   +L   E  +  +
Sbjct: 878 AILH-RLGRFEEAVADF 893


>gi|257093693|ref|YP_003167334.1| type IV pilus biogenesis/stability protein PilW [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257046217|gb|ACV35405.1| type IV pilus biogenesis/stability protein PilW [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 267

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 32/276 (11%), Positives = 86/276 (31%), Gaps = 41/276 (14%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDS-----VTDVRYQREVYEK-AVLFLKEQN 72
           L   AL    + +   +    +  + +  +DS       D R + +++ +   L+L+  N
Sbjct: 6   LATVALLCLGACSSTTVAPTAKAKAAEDEVDSRRPTPPRDARTRAKLHTELGSLYLQSGN 65

Query: 73  FSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
            + A +         P +      ++L       +   + + A    +  ++      ++
Sbjct: 66  LAVALQELLIAIDIDPDYGKAYGTRAL-----AHFGIRELELADRDFQRALSIDRNDPDI 120

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK-----------GAR 179
                    +Y   +  +   +     + + +   +       Y+               
Sbjct: 121 S-------NNYGWFLCQIGRGKEGITYLQRALKDPLYETPERAYLNAGGCYATLGDLDRA 173

Query: 180 FYVTVGRNQLA----AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
                   +LA      E+++   Y +RG+   A  +   ++      E   EA+  +V 
Sbjct: 174 ETFVQQSLRLAPGNPQAELQLANIYYRRGDLQLANEQLASLVRK---TEPNAEALWLMVR 230

Query: 236 AYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
              +L          + ++ ++P        E L+K
Sbjct: 231 VERSLGNRQAEARYSAQLRRKFPLSP---EAEELLK 263


>gi|255065140|ref|ZP_05316995.1| tetratricopeptide repeat protein [Neisseria sicca ATCC 29256]
 gi|255050561|gb|EET46025.1| tetratricopeptide repeat protein [Neisseria sicca ATCC 29256]
          Length = 627

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 76/215 (35%), Gaps = 44/215 (20%)

Query: 64  AVLFLKEQNFSKA------YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           A L  ++ N   A       +   +    +  +   ++  L   F        Q+A S  
Sbjct: 386 ASLEAEQGNGKAALAEARRAQSLPEQEGRYFGSKELQRVTL---FALSKHDNLQEALSEL 442

Query: 118 EEY---ITQYPES-KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
            +    I++ P++ + +  V Y   M Y     D   DQ      +  + R+VE   ++ 
Sbjct: 443 NKMLPKISRQPDAMEQLPDVLYQRAMIY-----DRMGDQG---KAIADLRRVVELAPDNA 494

Query: 174 YVKGA---------RFYVTVGRNQL-AAKEVE---------IGRYYLKRGEYVAAIPRFQ 214
               A         +  +      + AA ++E         +G  Y  + +   A+P  Q
Sbjct: 495 NGLNALGYILLSPTKKNLDEAFKLIQAAYQIEPENPAINDSLGWAYFLKDDVQTALPYLQ 554

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
                Y DAE A    A L EA  A    ++A+++
Sbjct: 555 YAFEKYPDAEVA----AHLGEALWASGEQEKAKKI 585


>gi|228905964|ref|ZP_04069859.1| hypothetical protein bthur0013_1540 [Bacillus thuringiensis IBL
          200]
 gi|228937472|ref|ZP_04100116.1| hypothetical protein bthur0008_1560 [Bacillus thuringiensis
          serovar berliner ATCC 10792]
 gi|228970360|ref|ZP_04131017.1| hypothetical protein bthur0003_1560 [Bacillus thuringiensis
          serovar thuringiensis str. T01001]
 gi|228976930|ref|ZP_04137340.1| hypothetical protein bthur0002_1560 [Bacillus thuringiensis
          Bt407]
 gi|229077535|ref|ZP_04210179.1| hypothetical protein bcere0023_2450 [Bacillus cereus Rock4-2]
 gi|228705735|gb|EEL58077.1| hypothetical protein bcere0023_2450 [Bacillus cereus Rock4-2]
 gi|228782782|gb|EEM30950.1| hypothetical protein bthur0002_1560 [Bacillus thuringiensis
          Bt407]
 gi|228789352|gb|EEM37274.1| hypothetical protein bthur0003_1560 [Bacillus thuringiensis
          serovar thuringiensis str. T01001]
 gi|228822191|gb|EEM68175.1| hypothetical protein bthur0008_1560 [Bacillus thuringiensis
          serovar berliner ATCC 10792]
 gi|228853651|gb|EEM98413.1| hypothetical protein bthur0013_1540 [Bacillus thuringiensis IBL
          200]
 gi|326937963|gb|AEA13859.1| hypothetical protein CT43_CH0166 [Bacillus thuringiensis serovar
          chinensis CT-43]
          Length = 254

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 22/58 (37%), Gaps = 5/58 (8%)

Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-----YEKAVLFLKEQ 71
          + K  L     +AV   VG   + ++         V+ ++E+     + KA    K +
Sbjct: 1  MKKLILISSLVLAVGLGVGCSNEKTKKTDEPKKEAVQKEKELTAKDVFNKANEAFKNE 58


>gi|220909066|ref|YP_002484377.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC
           7425]
 gi|219865677|gb|ACL46016.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425]
          Length = 293

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 58/187 (31%), Gaps = 34/187 (18%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
                 S +       +D +    +    V FL ++ + +A   F +     P       
Sbjct: 125 AALAIASCKKAVELKPSDAQTHLFL---GVAFLAQRQWQRAEMSFRKTLALDPNH---VD 178

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           +     +   +  K  +A +     I   P+  N+ Y    +G+       D    Q   
Sbjct: 179 AYYQLGYALLAQEKLSEAEAAFRRSIAMEPQ-ANLTY----IGL------GDALVAQEQF 227

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           +  +    + ++R    P        +   R         +G  Y ++  +  AI  +Q 
Sbjct: 228 EAAISAYRQSIQRVPAYP--------LAYLR---------LGNLYTRQNRWAEAIAIYQQ 270

Query: 216 VLANYSD 222
           V+  Y +
Sbjct: 271 VVKIYPN 277


>gi|149919660|ref|ZP_01908138.1| hypothetical protein PPSIR1_03293 [Plesiocystis pacifica SIR-1]
 gi|149819431|gb|EDM78861.1| hypothetical protein PPSIR1_03293 [Plesiocystis pacifica SIR-1]
          Length = 283

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 15/101 (14%), Positives = 29/101 (28%), Gaps = 15/101 (14%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY---EKAVLFLKEQNFSKAYEYFNQCS 84
            ++    +VG     +      + +      E +   E+AV   +   + +A E F +  
Sbjct: 14  LALCTATVVGAPTAHASLAIQPAESGAAPAGEAHRFTERAVADFEAGRYEQAVENFER-- 71

Query: 85  RDFPFAGVARKS----LLMSAFVQYSAGKYQQAASLGEEYI 121
                   A       L     V   AG    A      ++
Sbjct: 72  ------AYALDGNVNNLFNIGRVYEEAGDLPAAIDYYTRFL 106


>gi|118365491|ref|XP_001015966.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89297733|gb|EAR95721.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 3373

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 31/222 (13%), Positives = 66/222 (29%), Gaps = 44/222 (19%)

Query: 47  YLDSVTDVRYQRE--VYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFV 103
           YL+   D     E  + +++ +++    +  A +       +      +  + L      
Sbjct: 487 YLNQALDKSPGNEEFLVQRSNIYVDIGKYQDAIDDLTEALKKK----PLDPQVLYKRGLA 542

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDY------VYYLVGMSYAQMIRDVPYDQRATKL 157
            Y   ++++A      +       +N  Y      ++Y +G+SY+ M             
Sbjct: 543 FYKNKQFEKAIKDL--FRAL----ENKPYYSYESDIHYHLGISYSNM-EIYERSIEPLSK 595

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
            +Q           S Y             +         + YL  GEY  ++  F  V+
Sbjct: 596 AIQL----------SKYEP------CYIHER--------AKSYLLVGEYQKSVDDFTRVI 631

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
                  HA       +++     L  E  E    +    P+
Sbjct: 632 ELQPRNPHAYFGRGFALKSLKKYELASEDFEKAKELDPNNPK 673


>gi|21230813|ref|NP_636730.1| hypothetical protein XCC1356 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66769188|ref|YP_243950.1| hypothetical protein XC_2882 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|188992335|ref|YP_001904345.1| hypothetical protein xccb100_2940 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|21112414|gb|AAM40654.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66574520|gb|AAY49930.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167734095|emb|CAP52301.1| Putative membrane protein [Xanthomonas campestris pv. campestris]
          Length = 251

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 40/130 (30%), Gaps = 19/130 (14%)

Query: 64  AVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           A   L + ++++A E+F       +         +L  A  Q+  G+  Q     +  I 
Sbjct: 95  AETLLAQGDYAQAAEHFQGALRGLY---RDDLHLMLGLAKAQFGLGQPAQTRQTLDALIA 151

Query: 123 QYPESKNVD-YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
             P  ++ D ++ Y   +           D       L     + + Y      + AR  
Sbjct: 152 ANPTFRSHDGHLLYARAV----------EDSGDIDAALHEYETLAQGYP----GEEARVR 197

Query: 182 VTVGRNQLAA 191
                 + A 
Sbjct: 198 YAQLLQRTAR 207


>gi|116748131|ref|YP_844818.1| TPR repeat-containing protein [Syntrophobacter fumaroxidans MPOB]
 gi|116697195|gb|ABK16383.1| Tetratricopeptide TPR_2 repeat protein [Syntrophobacter
           fumaroxidans MPOB]
          Length = 626

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 84/257 (32%), Gaps = 35/257 (13%)

Query: 7   RAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVL 66
           R +   +    + ++ +L +F +        W + ++          ++    +Y  AV 
Sbjct: 285 RFLEKHQQHIPKAFQSSLMLFLADLNTQTKNWAKAATS-YEKAIKAGIKDPDVLYNLAVT 343

Query: 67  FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
           + +  +  KA +   +  +  P      KS L    +Q   G   QA S  E  + + P+
Sbjct: 344 YQQSDDPDKAIQALEKYLQKNPGD---TKSWLQLGELQEKKGALTQARSTYEAMLQKNPQ 400

Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
           ++          +     I +   D+ A +   Q ++                   T  R
Sbjct: 401 NRE--------ALVRLVAILEKGKDKGALQAAYQKLAA------------------TQPR 434

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
           N+     + +   Y    +Y  A   F+ V+A         E+   L++ Y        A
Sbjct: 435 NKTIQHNLGV--LYYDARKYDKAAACFEAVVALDPK---DVESRKYLLDIYRKQKNDKAA 489

Query: 247 REVVSLIQERYPQGYWA 263
             V+  + +  P+    
Sbjct: 490 TAVIQSLAQLDPKNTSY 506


>gi|297268736|ref|XP_001115675.2| PREDICTED: prolyl 4-hydroxylase subunit alpha-3-like [Macaca
           mulatta]
          Length = 567

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 24/73 (32%), Gaps = 10/73 (13%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDF--PFAGVA-------RKSLLMSAFVQYSAGKYQ 111
           ++   +     ++  A  +  +    F   +             +L   AF  + AG   
Sbjct: 185 FQVGKVAYDMGDYYHAIPWLEEAVSLFRGSYGEWKTEDEASLEDALDHLAFAYFQAGNVS 244

Query: 112 QAASLGEEYITQY 124
            A SL  E++  Y
Sbjct: 245 CALSLSREFL-LY 256


>gi|291569299|dbj|BAI91571.1| TPR domain protein [Arthrospira platensis NIES-39]
          Length = 530

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 23/203 (11%), Positives = 52/203 (25%), Gaps = 41/203 (20%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           ++ A   L++    +A   +NQ   + P +                 GK  +A +   + 
Sbjct: 6   FDTANQLLRKGQLDEAIASYNQAIAESPQSAW---YYHNLGEALSQQGKIDEAIAAYRQA 62

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS-------- 172
               P S                 +  +   Q      +    + +E   +         
Sbjct: 63  TELNPNSAW-----------SYDNLGTLLNQQGNLPEAVSCFRKAIELDPDFSEFYHNLA 111

Query: 173 ---------PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
                                 +   A     +G+ Y ++ +Y  A+  ++  L      
Sbjct: 112 LVLIKEGRLEEAVSLLQKAIELKADDAELYHSLGKAYQQQQQYSEAVTAYRQGLELNP-- 169

Query: 224 EHAEEAMARLVEAYVALALMDEA 246
                      + Y++L    EA
Sbjct: 170 --------YWSDCYLSLGQTLEA 184


>gi|301098252|ref|XP_002898219.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262105282|gb|EEY63334.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 661

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 37/106 (34%), Gaps = 26/106 (24%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYI---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
                +  Y   +Y QA    E+++      P+        Y  G +  ++ R       
Sbjct: 92  QFSRGYAYYRLQQYAQA---AEDFLECSRSDPDH--AASALYNRGCALYKLRRHA----- 141

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
                ++ +S+ ++  + +P    +R  V         KE+  GR+
Sbjct: 142 ---EAVKDLSKALKLDSKNPLFVESRARVL--------KEM--GRF 174


>gi|300024151|ref|YP_003756762.1| hypothetical protein Hden_2645 [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299525972|gb|ADJ24441.1| Tetratricopeptide TPR_2 repeat protein [Hyphomicrobium
           denitrificans ATCC 51888]
          Length = 239

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 39/126 (30%), Gaps = 14/126 (11%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++A LF  +    KA    +      P    A  +    A+++Y    Y  A       +
Sbjct: 124 DRAELFSSKNENDKALPLLDAAVDLAP--DYAE-AWSHRAYIEYRLNNYPAALGDLRRAL 180

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              P          L GM+       +       K  L+   ++++ + N    + AR  
Sbjct: 181 ALDPNHFRA-----LDGMA------KILTQMGEKKAALEAYDQLLKIHPNIEGAETARDE 229

Query: 182 VTVGRN 187
           +     
Sbjct: 230 LKKAVE 235


>gi|225181010|ref|ZP_03734457.1| TPR repeat-containing protein [Dethiobacter alkaliphilus AHT 1]
 gi|225168207|gb|EEG77011.1| TPR repeat-containing protein [Dethiobacter alkaliphilus AHT 1]
          Length = 319

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 27/74 (36%), Gaps = 7/74 (9%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASL 116
           ++   A   LK+    +A + +       P   +   R      A + Y A  + QA + 
Sbjct: 135 QLVAAAEAALKKGLPQEAAQNYKAALELKPAAGSLYQR-----IADLYYDAEDFSQAVTA 189

Query: 117 GEEYITQYPESKNV 130
             +Y+   P   +V
Sbjct: 190 YHKYLQHNPNDHSV 203


>gi|203284115|ref|YP_002221855.1| hypothetical protein BDU_193 [Borrelia duttonii Ly]
 gi|201083558|gb|ACH93149.1| uncharacterized conserved protein [Borrelia duttonii Ly]
          Length = 380

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 76/212 (35%), Gaps = 36/212 (16%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           K++NF KA  Y+ +C            +L        S G Y++A  + EEY+    +S+
Sbjct: 70  KKRNFDKAIIYYQKCLAKHSNNNY---ALFGLGDCYRSLGDYKKATDVWEEYLKY--DSE 124

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV--------KGARF 180
           N+  V   V  SY ++        +  +   Q   R++E   ++ Y            + 
Sbjct: 125 NIT-VLTRVASSYRKL--------KNFQKSRQSYLRVLELVPDNDYALVGIGHLYYDFKE 175

Query: 181 YVTVGRNQLAAKEVE-----------IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
           Y    +  L   E+            IG  Y K  E+   I  F+  L     + +   A
Sbjct: 176 YKEALKYWLKMYEINQVKIDVRVLTSIGNCYRKLKEFGKGIYFFKRALEI---SPNNFYA 232

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +  L + Y       EA +    I +R P+  
Sbjct: 233 IFGLADCYRGSKEYAEALKYWLTIIDRDPKNN 264


>gi|253698929|ref|YP_003020118.1| hypothetical protein GM21_0276 [Geobacter sp. M21]
 gi|251773779|gb|ACT16360.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. M21]
          Length = 624

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 67/224 (29%), Gaps = 45/224 (20%)

Query: 61  YEKAVLFLKE-----QNFSKAYEYFNQCSRDF---PFAGVARKSLLMSAFVQYSAGKYQQ 112
           Y  A   L E      + + A   + +        P +          A +     +Y  
Sbjct: 372 YGDARRRLAEIHSVRGDLNAAIAQYRELVSRHGDNPLSYY------KLARLYEQGRQYAD 425

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A +   + I    +S+              Q I  +   ++  +   +++  ++      
Sbjct: 426 AIAAYSKAIELDQDSEVA-----------HQGIARLYLKRKQAEEAEKHLLEVLRLDPKH 474

Query: 173 PYVKGA-------------RFYVTVGRNQL----AAKEVEIGRYYLKRGEYVAAIPRFQL 215
              +                  +     +L    A  +  +G  Y  RG    A  ++Q 
Sbjct: 475 AEARELLISLYVKARRYDDTEKLLKASAELNPDSANDQYRLGVIYAFRGNNDGAREQYQK 534

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            L    D      A+  L + Y+ L   ++ARE ++  ++  P 
Sbjct: 535 ALELKPD---HARALNALGKLYLRLGQKEKAREALAAARKADPD 575


>gi|189425157|ref|YP_001952334.1| hypothetical protein Glov_2098 [Geobacter lovleyi SZ]
 gi|189421416|gb|ACD95814.1| Tetratricopeptide TPR_2 repeat protein [Geobacter lovleyi SZ]
          Length = 566

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 69/234 (29%), Gaps = 44/234 (18%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREV--YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
                    D   D V        +  Y +A LF  E N  +A     Q     P     
Sbjct: 15  AACGSVRPADSPEDGVASAHLHSGLGAYAQARLFWNEGNVEQALILTRQAQTADPVTPYP 74

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQ 152
               L+ A +   +G+ Q + +  +  I   P     DY   YL+G S    +       
Sbjct: 75  I---LLEAEILLKSGRVQDSLAAVDRAIKVAP-----DYRPSYLLGGSIMSTM------- 119

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE------------------- 193
             TK    Y+   V         + A  ++     QL   E                   
Sbjct: 120 GKTKEAAAYLRNAVRLEPG---KEDAVLHLVTTLMQLFEYEESVTVLKSLIKVKPESAVG 176

Query: 194 -VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
              + + Y +   Y  +I  +Q  L    +     +A   +  +Y AL   D+A
Sbjct: 177 NYYLAKVYSQMKLYRESIGYYQKALELRPE---FIQATIDMAISYEALGEYDKA 227


>gi|159027046|emb|CAO89232.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 970

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 45/142 (31%), Gaps = 23/142 (16%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLGE 118
           Y + +       F +A   +++     P F      + L        + G+Y++A +  +
Sbjct: 214 YNRGIALRNLGRFEQAIASYDRALEFKPDFHEAWTNRGL-----ALKNLGRYEEAIASYD 268

Query: 119 EYITQYPE-SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
             +   P+  +     +Y  G++   + R            +    + +E   +  Y + 
Sbjct: 269 RALEIKPDCHE----AWYNRGIALHNLGRFA--------EAIASYDQALEIKPD--YHEA 314

Query: 178 ARFYVTVGRNQLAAKEVEIGRY 199
                    N L   E  I  +
Sbjct: 315 WYNRGIALHN-LGRFEQAIASW 335


>gi|311745836|ref|ZP_07719621.1| putative tetratricopeptide TPR_2 [Algoriphagus sp. PR1]
 gi|126576039|gb|EAZ80317.1| putative tetratricopeptide TPR_2 [Algoriphagus sp. PR1]
          Length = 221

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 26/60 (43%), Gaps = 3/60 (5%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
             + E+ +  +  + +Q++S+A  YF++     P    A  +        +   K+++A 
Sbjct: 5   PSEEELLQAGIEKMDQQSWSEAIPYFDRALEQNPENATALNAK---GVALFQQEKFEEAI 61


>gi|86159752|ref|YP_466537.1| hypothetical protein Adeh_3333 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85776263|gb|ABC83100.1| tetratricopeptide repeat protein [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 274

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 61/189 (32%), Gaps = 46/189 (24%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY-EYFNQCSRDFPFAGVARK 95
           GW  ++  + +     D          A ++ +++ + +A  EY     R  P       
Sbjct: 26  GWLDEAINEFHKAIELDPSSAHAHDNLATVYSEKKRYREALNEYLTAL-RLEP------- 77

Query: 96  SLLMSAFVQYSAG------KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
               SA   Y+            A +  ++ I   P+  +    +  +G++ A       
Sbjct: 78  ---DSATAHYNLACFLATHGPDMAIAEYQDAIQLEPDHPD---AHLNLGLTLA------- 124

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
            DQ  T+  ++ +   +E     P+                  E+      +  G+Y AA
Sbjct: 125 -DQGKTEEAVKELGVAIELEPTDPFP---------------RHEL--AGLLMDEGDYRAA 166

Query: 210 IPRFQLVLA 218
           I   + V+ 
Sbjct: 167 IAHLKEVVR 175


>gi|116620738|ref|YP_822894.1| peptidase C14, caspase catalytic subunit p20 [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116223900|gb|ABJ82609.1| peptidase C14, caspase catalytic subunit p20 [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 911

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 38/140 (27%), Gaps = 31/140 (22%)

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
             KY  A     + I   P      Y Y  +G++Y +M R                   +
Sbjct: 598 QKKYTDAIDSLRQSIRLEPR---AAYAYNALGIAYLEMARYDD--------AAHAFQDAI 646

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
           +R     Y    R  + +   Q     + +         YVAA       +       + 
Sbjct: 647 DRAPLWAYP---RHNLALAHWQQGQYRLAVAD-------YVAA-------MEKAPTYFYL 689

Query: 227 EEAMARLVEAYVALALMDEA 246
              +  L   Y  L    EA
Sbjct: 690 PYNLGLL---YATLNQQKEA 706


>gi|327479191|gb|AEA82501.1| HemY protein [Pseudomonas stutzeri DSM 4166]
          Length = 406

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 26/71 (36%), Gaps = 8/71 (11%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA---RKSLLMSAFVQYSAGKYQQAASLGEE 119
            A    +   ++++ E   +     P A +A    ++ L  A      G+Y +A +    
Sbjct: 125 AARAANELGEYAQSDELLQKAREREPEAALAIGLTQAQLQIA-----RGQYVEARASLSA 179

Query: 120 YITQYPESKNV 130
             + +P    V
Sbjct: 180 LQSDHPRHPYV 190


>gi|322827979|gb|EFZ31941.1| DNA-J protein, putative [Trypanosoma cruzi]
          Length = 551

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 60/177 (33%), Gaps = 33/177 (18%)

Query: 50  SVTDVRYQREVY----------EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL- 98
           S  ++R+  E+Y          E    FL+E++F+ A       +R FP    A  + + 
Sbjct: 116 SKEEIRHVHELYLNAEEGSKAIENGQRFLEERDFAAAERCLASTARSFP--DCAPVAFIF 173

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
             A       + ++       +  ++ E  +  Y  Y+  +S           Q   K+ 
Sbjct: 174 GEARA---PRQPEEVNRALVRFAQKHEEDPS--Y-LYVRALSNYY------RGQDGFKVA 221

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR-----GEYVAAI 210
              + + +E   ++         + V  +    KE     Y  KR       Y AAI
Sbjct: 222 QGILRQALELDPDNRKASALLKMIRVMESH---KERGNAAYREKRYRDAINAYAAAI 275


>gi|322495154|emb|CBZ30458.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 425

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 73/243 (30%), Gaps = 39/243 (16%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYE---KAVLFLKEQNFSKAYEYFNQC--SR 85
           A    +G    +         T    ++E+ E   +A    ++  FS A E + +   S+
Sbjct: 51  ASSGGIGSNASTGDSSTGTDATADLSEKELIELNKEAAEAFEKGEFSSAIEAWEKVAQSK 110

Query: 86  DF-PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY-----LVGM 139
              P +      L   A      G   +   L E        S+++    Y       GM
Sbjct: 111 QHTPNSPTLMSCLNNLACAYGEMGDSIRKLKLLER-------SRDLVQAVYGTDHPQYGM 163

Query: 140 SYAQMI---RDVPYDQRATKLMLQYMSRIVERY-TNSPYVKGARFYVTVGRNQLAAKEVE 195
               M     ++       +L+ Q ++   +R+      V      +      L   E  
Sbjct: 164 VLYNMACAKEEMGLYPDMKQLLEQSLALHEKRFNPRHAKVGRVLLLLAAAHGHLGEHE-- 221

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE--AMARLVEAYVALALMD----EAREV 249
                      +    R   ++  +   EH +   AM  L  AY A   ++     A+  
Sbjct: 222 ---------AQLRTAERAYEIVKRHCGPEHVQTTIAMMTLGRAYGAAGQVERQLQLAQAA 272

Query: 250 VSL 252
            S+
Sbjct: 273 YSI 275


>gi|300087339|ref|YP_003757861.1| preprotein translocase subunit SecA [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
 gi|299527072|gb|ADJ25540.1| preprotein translocase, SecA subunit [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
          Length = 1072

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 44/121 (36%), Gaps = 17/121 (14%)

Query: 149 PYDQRATKLMLQYMSRIVER----YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
                 T+        +V R      +S Y     F +   RN LAAKE     +Y +  
Sbjct: 322 ERQAELTEEGWIKFENLVRREGLLKADSVYDPQNAFLIRHLRNALAAKE-----FYHRDR 376

Query: 205 EYV----AAIPRFQLVLANYSDAEHA----EEAMARLVEAYVALALMDEAREVVSLIQER 256
           +YV        R  +++  ++  +       E + + +EA   + +  E +   S+  + 
Sbjct: 377 QYVVDRDPDGGRGIVIVDEFTGRKMVGRRYSEGLHQAIEAKEGVKIRQETKTYASITIQN 436

Query: 257 Y 257
           Y
Sbjct: 437 Y 437


>gi|291403762|ref|XP_002718007.1| PREDICTED: tetratricopeptide repeat domain 6 [Oryctolagus cuniculus]
          Length = 1265

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 35/88 (39%), Gaps = 3/88 (3%)

Query: 35   LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94
            L+G ++ + +D       +  Y    +    ++   + FS+A +YF++  +  P    AR
Sbjct: 1105 LMGQKQNAMKDYQAAISLNPAYSLAYFNAGNIYFHHRQFSQASDYFSKALKFDPENEYAR 1164

Query: 95   KSLLMSAFVQYSAGKYQQAASLGEEYIT 122
               +  A       KY++A       I 
Sbjct: 1165 ---MNRAVAHMLLKKYEEAKDDFARVID 1189


>gi|224369058|ref|YP_002603222.1| tetratricopeptide repeat protein (TPR family protein)
           [Desulfobacterium autotrophicum HRM2]
 gi|223691775|gb|ACN15058.1| tetratricopeptide repeat protein (TPR family protein)
           [Desulfobacterium autotrophicum HRM2]
          Length = 787

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 34/262 (12%), Positives = 81/262 (30%), Gaps = 70/262 (26%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE-VYEKAVLFLKEQNFSKAYEYFNQCSRD 86
           F +   F++G + + +R+   + +       + ++  A   ++E+N   A +  ++    
Sbjct: 106 FRLGQVFILGRQTKKARETAQNILAKQPENTKALHLLATAQVQERNIDAAIKTLDKAISI 165

Query: 87  FPFAGVARKSLLMSAFV------QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
            P             +        Y    ++++ +                   YL  +S
Sbjct: 166 EPGNAH--------LYAFLGFLFYYDKNDFEKSEAA------------------YLKAIS 199

Query: 141 YAQMIRD-------VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV--GRNQLAA 191
               I +       +  D++  +     +  +      + ++            RNQL  
Sbjct: 200 IDNSIDEPYEELLAIYKDKKMFEKAESLLVYLTNT-PKN-HIPKLSKLADFYASRNQLKK 257

Query: 192 KE------------------VEIGRYYLKRGEYVAAIPRFQLV--LANYSDAEHAEEAMA 231
            E                    +G +Y++   Y +A+  F  V  + N  D         
Sbjct: 258 AEKIYLQAVQESNKKDYLPLYNLGTFYVRTKNYKSAVNSFNKVLSIKNDPDIRSD----- 312

Query: 232 RLVEAYVALALMDEAREVVSLI 253
            L   Y  L   ++A+E  ++I
Sbjct: 313 -LANVYFELKEFEKAKEQATII 333


>gi|240981045|ref|XP_002403605.1| SET and MYND domain-containing protein (SMYD), putative [Ixodes
           scapularis]
 gi|215491387|gb|EEC01028.1| SET and MYND domain-containing protein (SMYD), putative [Ixodes
           scapularis]
          Length = 770

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 39/121 (32%), Gaps = 21/121 (17%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQ--CSRDFPFAGVAR--KSLLMSAFVQ----- 104
                E+  +  L    + ++KA E + Q   S  FP    A      +   F       
Sbjct: 66  WEKASELRSEGNLCFNRKQYAKAAELYTQSVLSAPFPDTPDAEGHSEEMSLGFANRSAAF 125

Query: 105 YSAGKYQQAASLGE-EYITQYPESKNVDYVYYLV-GMSYAQMIRDVPYDQRATKLMLQYM 162
           + AGKY+QA       +   YP      Y  YL  G  Y ++           +  L+  
Sbjct: 126 FHAGKYKQALCDVRYAFELGYPVHLR--YKLYLRKGQCYLRL--------GKPREALENF 175

Query: 163 S 163
            
Sbjct: 176 D 176


>gi|126644183|ref|XP_001388227.1| phosphoprotein phosphatase  related [Cryptosporidium parvum Iowa
           II]
 gi|126117300|gb|EAZ51400.1| phosphoprotein phosphatase  related, putative [Cryptosporidium
           parvum Iowa II]
          Length = 525

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 16/137 (11%), Positives = 38/137 (27%), Gaps = 29/137 (21%)

Query: 63  KAVLFLKEQNFSKAYEYFN-QCSRDFPFAG---------VARKSLLMSAFVQYSAGKYQQ 112
           K     K   +++A EY+                      + ++L            +  
Sbjct: 20  KGNESFKSGKYNEAIEYYTLAIKTSQASNETQNKNLHIYYSNRAL-----CHIRLENFGS 74

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A     E I   P        YY  G++Y  +++          L  +    ++     +
Sbjct: 75  AIEDSGESIKCCPSFSK---AYYRRGIAYFNLLKYS--------LARKDFMMVLNL---T 120

Query: 173 PYVKGARFYVTVGRNQL 189
              + A+  + +    +
Sbjct: 121 QNDRDAQSKIQICTKLI 137


>gi|4102831|gb|AAD01597.1| peptidyl-prolyl cis-trans isomerase [Brugia malayi]
          Length = 426

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 13/136 (9%), Positives = 40/136 (29%), Gaps = 19/136 (13%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF-----VQYSAGKYQQAAS 115
           +++  + L    + +  E               R +LL++ +     V     +  +   
Sbjct: 266 FKQGKMRLPAAKYMRVIELLEYEKSLENETKSRRDALLLAGYLNSALVYAKQDETVECIK 325

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
             ++ +   P+        Y   ++  + I             +    +++E   ++   
Sbjct: 326 NCDKALEVDPKCVK---ALYRKALALQEQID--------ADEAIIKYKKVLEYEPDNK-- 372

Query: 176 KGARFYVTVGRNQLAA 191
             A   +   +  LA 
Sbjct: 373 -AAIAQIAACKKMLAE 387


>gi|15893695|ref|NP_347044.1| TPR repeat-containing serine/threonin protein kinase [Clostridium
           acetobutylicum ATCC 824]
 gi|15023256|gb|AAK78384.1|AE007555_4 Serine/threonine protein kinase fused to TPR repeats domain
           [Clostridium acetobutylicum ATCC 824]
          Length = 657

 Score = 36.6 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 39/111 (35%), Gaps = 22/111 (19%)

Query: 61  YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y   +    +QN  KA EYF     ++        K+ +         G+Y Q+      
Sbjct: 326 YNNIIENGSKQNGDKAVEYFKQAVDKN----SSNPKAYIKIIDTYLENGEYDQSID---- 377

Query: 120 YITQYPESKNVD-----YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
           +I     +K  +      + + +GM+Y         D  +     QY ++I
Sbjct: 378 FIETNLNNKQSELLKDNELLFKIGMAYF--------DDESYAKAYQYFNKI 420


>gi|332827935|gb|EGK00657.1| hypothetical protein HMPREF9455_02931 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 661

 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 18/35 (51%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
             L  A   + AG Y+QAA   +E++  YP ++  
Sbjct: 97  VTLQYARSLHKAGDYKQAAKYYQEFLQLYPGNQFA 131


>gi|228950716|ref|ZP_04112849.1| hypothetical protein bthur0006_1550 [Bacillus thuringiensis
          serovar kurstaki str. T03a001]
 gi|228808952|gb|EEM55438.1| hypothetical protein bthur0006_1550 [Bacillus thuringiensis
          serovar kurstaki str. T03a001]
          Length = 254

 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 22/58 (37%), Gaps = 5/58 (8%)

Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-----YEKAVLFLKEQ 71
          + K  L     +AV   VG   + ++         V+ ++E+     + KA    K +
Sbjct: 1  MKKLILISSLVLAVGLGVGCSNEKTKKTDEPKKEAVQKEKELTAKDVFNKANEAFKNE 58


>gi|227536270|ref|ZP_03966319.1| flagellar motor protein MotB [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227243877|gb|EEI93892.1| flagellar motor protein MotB [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 301

 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 28/90 (31%), Gaps = 10/90 (11%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSS----RDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
           + +  L I   ++  FL            +  Y    T+ R   + Y++  L L E    
Sbjct: 2   MKQSVLPISILLSGLFLTSCVSSGKFKSLQTDYDKLQTEHRDLAQKYQQGQLDLTEGRTR 61

Query: 75  KAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
              +   +      +   A  + L  A+  
Sbjct: 62  --IKSLEE---QLAY-EKANNAQLKEAYAN 85


>gi|254421497|ref|ZP_05035215.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC
           7335]
 gi|196188986|gb|EDX83950.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC
           7335]
          Length = 322

 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 48/131 (36%), Gaps = 17/131 (12%)

Query: 61  YEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           Y+  +L+L +Q +S A + F    +  +D+  A                      A    
Sbjct: 203 YQIGLLYLSQQQYSNAQKAFENAIELDKDYAEAHY------NLGVSFVRQNILAPAVIAF 256

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           +  I   P   N  + YY   +++A + R       A K +L   S I     NS +   
Sbjct: 257 DAAINLQP---NFAHAYYAKALAFADLQRY-----EAAKELLTTASNIYLTQGNSEWATI 308

Query: 178 ARFYVTVGRNQ 188
           A+  +T+  +Q
Sbjct: 309 AQNQITLIEDQ 319


>gi|195396103|ref|XP_002056672.1| GJ11067 [Drosophila virilis]
 gi|194143381|gb|EDW59784.1| GJ11067 [Drosophila virilis]
          Length = 947

 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 42/116 (36%), Gaps = 8/116 (6%)

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-----GRYYLKRGE 205
           D  A    + +  +  E +  + +    + Y    +     KE+ +        YLK  +
Sbjct: 5   DTTAAAEAISHKDKGNEAFKAAKWTDAVQEYSAAIKLGAKHKELPVFYKNRAAAYLKLEK 64

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           Y  A+      L    +     +A+ R  +AY AL   +EA +  + + +  P   
Sbjct: 65  YTEAVDDCNESLRLGPN---DPKALFRRAQAYEALNKPEEAYKDATALFKADPGNK 117



 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 15/136 (11%), Positives = 40/136 (29%), Gaps = 21/136 (15%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL-----MSAFVQYSAGKYQQAASL 116
           +K     K   ++ A + ++   +       A+   L       A       KY +A   
Sbjct: 17  DKGNEAFKAAKWTDAVQEYSAAIKLG-----AKHKELPVFYKNRAAAYLKLEKYTEAVDD 71

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
             E +   P         +    +Y  + +         +   +  + + +    +  V+
Sbjct: 72  CNESLRLGPNDPK---ALFRRAQAYEALNK--------PEEAYKDATALFKADPGNKSVQ 120

Query: 177 GARFYVTVGRNQLAAK 192
                + +   + AA+
Sbjct: 121 PMLQRLHLIVQENAAR 136


>gi|168702109|ref|ZP_02734386.1| TPR repeat [Gemmata obscuriglobus UQM 2246]
          Length = 489

 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 21/137 (15%), Positives = 37/137 (27%), Gaps = 26/137 (18%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            +  +    + F+KA   + +  R  P + +   +            +Y +A    +E I
Sbjct: 230 SRGNVLSDRRQFAKAIADYTEVIRRSPQSSL---AYCNRGHAYNDTKEYDKALKDLDESI 286

Query: 122 TQYPE----SKNVDYVYYLVG---MSYAQMIRDVPYDQR------------ATK----LM 158
              P            +Y  G    + A     +  D R            A K      
Sbjct: 287 RLNPRYVPAHLTRGKAWYGKGEHDKAIANYTEALRLDPRYISPYLHRGLAWAAKGEHDKA 346

Query: 159 LQYMSRIVERYTNSPYV 175
           +   S  V     S Y 
Sbjct: 347 IADYSAAVRLDPKSIYA 363


>gi|148673721|gb|EDL05668.1| aspartate-beta-hydroxylase, isoform CRA_b [Mus musculus]
          Length = 717

 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 3/67 (4%)

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           E++      KRG+   A+  F+ ++  Y  +     A     +    LA    + EV+  
Sbjct: 303 ELDAAEKLRKRGKIEEAVNAFEELVRKYPQSP---RARYGKAQCEDDLAEKQRSNEVLRR 359

Query: 253 IQERYPQ 259
             E Y +
Sbjct: 360 AIETYQE 366



 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 25/80 (31%), Gaps = 17/80 (21%)

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
             +   +  +     +V +Y  SP  +  +       + LA K         +R   V  
Sbjct: 311 RKRGKIEEAVNAFEELVRKYPQSPRARYGKA---QCEDDLAEK---------QRSNEV-- 356

Query: 210 IPRFQLVLANYSDAEHAEEA 229
               +  +  Y +A    +A
Sbjct: 357 ---LRRAIETYQEAADLPDA 373


>gi|148673725|gb|EDL05672.1| aspartate-beta-hydroxylase, isoform CRA_f [Mus musculus]
          Length = 741

 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 3/67 (4%)

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           E++      KRG+   A+  F+ ++  Y  +     A     +    LA    + EV+  
Sbjct: 327 ELDAAEKLRKRGKIEEAVNAFEELVRKYPQSP---RARYGKAQCEDDLAEKQRSNEVLRR 383

Query: 253 IQERYPQ 259
             E Y +
Sbjct: 384 AIETYQE 390



 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 25/80 (31%), Gaps = 17/80 (21%)

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
             +   +  +     +V +Y  SP  +  +       + LA K         +R   V  
Sbjct: 335 RKRGKIEEAVNAFEELVRKYPQSPRARYGKA---QCEDDLAEK---------QRSNEV-- 380

Query: 210 IPRFQLVLANYSDAEHAEEA 229
               +  +  Y +A    +A
Sbjct: 381 ---LRRAIETYQEAADLPDA 397


>gi|148673726|gb|EDL05673.1| aspartate-beta-hydroxylase, isoform CRA_g [Mus musculus]
          Length = 702

 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 3/67 (4%)

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           E++      KRG+   A+  F+ ++  Y  +     A     +    LA    + EV+  
Sbjct: 288 ELDAAEKLRKRGKIEEAVNAFEELVRKYPQSP---RARYGKAQCEDDLAEKQRSNEVLRR 344

Query: 253 IQERYPQ 259
             E Y +
Sbjct: 345 AIETYQE 351



 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 25/80 (31%), Gaps = 17/80 (21%)

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
             +   +  +     +V +Y  SP  +  +       + LA K         +R   V  
Sbjct: 296 RKRGKIEEAVNAFEELVRKYPQSPRARYGKA---QCEDDLAEK---------QRSNEV-- 341

Query: 210 IPRFQLVLANYSDAEHAEEA 229
               +  +  Y +A    +A
Sbjct: 342 ---LRRAIETYQEAADLPDA 358


>gi|308809489|ref|XP_003082054.1| chloroplast Toc64-2 (ISS) [Ostreococcus tauri]
 gi|116060521|emb|CAL55857.1| chloroplast Toc64-2 (ISS) [Ostreococcus tauri]
          Length = 612

 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 38/141 (26%), Gaps = 23/141 (16%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEE 119
            K    LK+  +  A EY+       P     VA +++          G Y+        
Sbjct: 490 AKGNEALKKGKYQDAIEYYGVAIGKNPKNPVYVANRAM-----AHLKLGNYELCEDDCTT 544

Query: 120 YITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
            I       +  Y   Y     +     R V          L      +    N+   K 
Sbjct: 545 AIKL-----DRKYTKAYLRRATA-----RSVG---GNYLEALMDFEEALRLEPNNSDAKR 591

Query: 178 ARFYVTVGRNQLAAKEVEIGR 198
               +      +A   +++G+
Sbjct: 592 EVNRMKKIIG-MADPGMDVGK 611


>gi|328874966|gb|EGG23331.1| hypothetical protein DFA_05463 [Dictyostelium fasciculatum]
          Length = 647

 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 81/236 (34%), Gaps = 54/236 (22%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA---GVARKSLLMSA 101
           +     +T     +++ ++A + L ++N+++A E+F Q     P +    +++ + L S 
Sbjct: 181 EPEEKPMTPEEQSKDLCDQANILLWKKNYAQALEFFTQAQHLNPSSYEIPLSKAAALNS- 239

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ------------------ 143
                +G+Y+ A +  +         K++D    + GM   +                  
Sbjct: 240 -----SGRYEDAIAECQ---------KSLDLAQEMKGMVNQKGYLPDNQDEVKEEIILRI 285

Query: 144 ---MIRDVPYDQRAT------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
              M R       +       K   QY+ + +E + NS   +     V      L++ EV
Sbjct: 286 EQMMSRSCARMATSFMGNGDYKQARQYIVQAIETF-NSAEFEEMLKMVNELIG-LSSTEV 343

Query: 195 EI----GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
                  +   +  +Y  AI  +  VL    +       +A     Y  L     A
Sbjct: 344 TALYKSAKDMYRAQDYQEAIRLYTEVLQIDPNNNII---LANRAMCYNKLKQYPMA 396


>gi|298504919|gb|ADI83642.1| ABC transporter, membrane protein [Geobacter sulfurreducens KN400]
          Length = 340

 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 11/75 (14%), Positives = 29/75 (38%), Gaps = 2/75 (2%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCS--RDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
             ++ +A   +   +   A E   +    R         +S +  A + ++A +  +A +
Sbjct: 33  DALFREANDLMGAGDLPAAMEVLKKVPAPRAGEEGDAFVRSRMQIAKLHFAAKEMDEALA 92

Query: 116 LGEEYITQYPESKNV 130
              E ++ YP++   
Sbjct: 93  AAREVLSLYPDNSEA 107


>gi|268326096|emb|CBH39684.1| conserved hypothetical protein, containing TPR repeat [uncultured
           archaeon]
          Length = 479

 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 63/183 (34%), Gaps = 50/183 (27%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYY---LVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           G+Y +A  L  E I   P  +   Y YY   L G  Y ++              +    +
Sbjct: 283 GEYNKAIELCNEEIAL-PIFEWYPYAYYAYTLRGACYYEL--------GEYGKAISDFEK 333

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKE-----------------VEIGRY-------- 199
           ++E Y  S     A  Y+ +  ++ A  E                 +E+G +        
Sbjct: 334 VIEEY-ESELEAHAYMYLGMAHSE-AGNETEARAAFESAVDLYNVTIEVGGWVGAGTYND 391

Query: 200 ----YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL-------MDEARE 248
               YL   EY  AIP F+ V+    +   A       +EAY  L +        D+AR+
Sbjct: 392 RGLCYLGLDEYDLAIPDFEKVIELEPNYVDAHSGKNLYIEAYKNLGIAYSASGDKDKARD 451

Query: 249 VVS 251
            + 
Sbjct: 452 YLE 454


>gi|255014061|ref|ZP_05286187.1| TPR repeat-containing protein [Bacteroides sp. 2_1_7]
          Length = 707

 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 71/225 (31%), Gaps = 52/225 (23%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCS 84
           +  ++AV F+   +   +   + D +T        Y  +  ++L++ +  KA   +N+  
Sbjct: 127 MLVNMAVAFIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAI 186

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL-VGMSYAQ 143
              P+   A  +    A + Y    Y+ A +   E +            YY+  G+   Q
Sbjct: 187 EMDPY--YAP-AYGNRAILHYQMDDYKDALADLNEALRLDTRESG----YYINRGLVRYQ 239

Query: 144 MIR----DVPYDQ----------------------RATKLMLQYMSRIVERYTNSPYVKG 177
           M         YDQ                            ++    ++++  ++     
Sbjct: 240 MNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIEDFDVVIQQEPDN----- 294

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
              Y+      L   E          G+Y  A+  + +VL  Y  
Sbjct: 295 ---YMAYYNRALLRFE---------TGDYRGAVQDYDVVLKQYPT 327


>gi|254425291|ref|ZP_05039009.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC
           7335]
 gi|196192780|gb|EDX87744.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC
           7335]
          Length = 174

 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 51/145 (35%), Gaps = 26/145 (17%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL---MSAFVQYSAGK 109
           +     E YE   L L ++ +++A  Y  +  ++ P    A  ++L      +  ++  +
Sbjct: 49  EKGTALEYYELGSLLLDKKLYAQAAAYLKKALKELP-EEEAENAVLVHNALGYSYFAQDQ 107

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           +  A     E +   P+        Y+  ++              T    Q M + +E Y
Sbjct: 108 FDLAIRQYNEALKIRPD--------YVTALNNL----------GHTYERKQLMPQALETY 149

Query: 170 TNS----PYVKGARFYVTVGRNQLA 190
             S    P  + A+      R +LA
Sbjct: 150 EKSLATEPANETAKRRADSLRKRLA 174


>gi|162456024|ref|YP_001618391.1| hypothetical protein sce7742 [Sorangium cellulosum 'So ce 56']
 gi|161166606|emb|CAN97911.1| hypothetical protein sce7742 [Sorangium cellulosum 'So ce 56']
          Length = 293

 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 11/84 (13%), Positives = 34/84 (40%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
              + + +  +  +  +A   +++ + S A +  +     FP   +  + +        +
Sbjct: 196 QPATPSTLAAEMALLREAQDAVRDGDPSAALDRLDDLGARFPEGQLREERMAARVLALCA 255

Query: 107 AGKYQQAASLGEEYITQYPESKNV 130
           AG+  +A +  E  + + P S ++
Sbjct: 256 AGRAPEARAEAERLLGEAPGSVHM 279


>gi|161525096|ref|YP_001580108.1| cellulose synthase domain-containing protein [Burkholderia
           multivorans ATCC 17616]
 gi|189350160|ref|YP_001945788.1| hypothetical protein BMULJ_01316 [Burkholderia multivorans ATCC
           17616]
 gi|160342525|gb|ABX15611.1| cellulose synthase operon C domain protein [Burkholderia
           multivorans ATCC 17616]
 gi|189334182|dbj|BAG43252.1| conserved hypothetical protein [Burkholderia multivorans ATCC
           17616]
          Length = 1313

 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 44/119 (36%), Gaps = 21/119 (17%)

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
           YA  + DV   Q         ++  V R  + P  + A   +                  
Sbjct: 760 YALELADVERAQGRYDAARDALAPFVARQPDDPDTQLALARIDE---------------- 803

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEE-AMARLVEAYVALALMDEAREVVSLIQERYP 258
            + G   AA+ R + VLA   D +     A+ R + A   L   D+A++V + ++  YP
Sbjct: 804 -ESGRRAAALARVEAVLARTPDDDVVTRLAVVRRLNA---LGRPDDAQQVTAPLRAAYP 858


>gi|126731915|ref|ZP_01747719.1| TPR domain protein [Sagittula stellata E-37]
 gi|126707742|gb|EBA06804.1| TPR domain protein [Sagittula stellata E-37]
          Length = 700

 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 42/120 (35%), Gaps = 13/120 (10%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           + F   + FS+A+   VG   Q                 +   +     + +++ +A   
Sbjct: 326 FAFRRGLVFSLALIG-VGLALQPGAAQASPWDDLWATPDQ---QGRAAFQAEDYGEAAAD 381

Query: 80  FN----QCSRDFPFAGVARKSLLMS-----AFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           F     + +  +        + LM+           +G+++QA +  +E + + PE  + 
Sbjct: 382 FENPAWKGAAAYREGDFKTAADLMASPFNRGNALAKSGEFEQALAAYDEALARDPEDADA 441


>gi|108758662|ref|YP_631141.1| hypothetical protein MXAN_2930 [Myxococcus xanthus DK 1622]
 gi|108462542|gb|ABF87727.1| hypothetical protein MXAN_2930 [Myxococcus xanthus DK 1622]
          Length = 286

 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 21/63 (33%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
            +   A   F    R  P   + +++    A      G      S  E +++ +P+S  V
Sbjct: 214 GDARGALRQFKAALRVQPRGVLDQEAQHGIAEAHRVLGDRDAERSALESFLSTHPDSPLV 273

Query: 131 DYV 133
              
Sbjct: 274 PSA 276


>gi|90579367|ref|ZP_01235177.1| Hypothetical fimbrial biogenesis and twitching motility protein
           [Vibrio angustum S14]
 gi|90440200|gb|EAS65381.1| Hypothetical fimbrial biogenesis and twitching motility protein
           [Vibrio angustum S14]
          Length = 252

 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 29/261 (11%), Positives = 77/261 (29%), Gaps = 49/261 (18%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
           +++  ++     G       D   +       +  +    + +LK+  + +A E      
Sbjct: 5   SVYPLLSCLLFTGCATVDVVDNGKEFDAKAASEARL-NLGLNYLKDGQWERARENLEIAL 63

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES----------------- 127
           R  P      ++ +  A+     G+   A  +  + +   P++                 
Sbjct: 64  RYDP--DY-YRAQISMAYYYQKVGEKDAADKMYRKVLKHSPKNGDVLNNYGVFLCSEGRY 120

Query: 128 --------KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
                   K ++  YY +  +  +        Q   +    Y    +       Y   + 
Sbjct: 121 DEAIAAFVKAIEQPYYYLISASYENAGLCSRKQGNLEAATGYFENALSHDP---YRPRSM 177

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                   QLA  E+E   +   R            +        +  +++  L++    
Sbjct: 178 L-------QLAQVEIESNNFKDAR----------VQLFKFNKRYGYTADSLWLLIQLERQ 220

Query: 240 LALMDEAREVVSLIQERYPQG 260
              + ++++   L++E+YP  
Sbjct: 221 AGRLTQSKKYAILLKEKYPDS 241


>gi|26330882|dbj|BAC29171.1| unnamed protein product [Mus musculus]
 gi|123122167|emb|CAM15538.1| aspartate-beta-hydroxylase [Mus musculus]
 gi|123209989|emb|CAM26683.1| aspartate-beta-hydroxylase [Mus musculus]
 gi|123228159|emb|CAM19145.1| aspartate-beta-hydroxylase [Mus musculus]
          Length = 658

 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 3/67 (4%)

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           E++      KRG+   A+  F+ ++  Y  +     A     +    LA    + EV+  
Sbjct: 244 ELDAAEKLRKRGKIEEAVNAFEELVRKYPQSP---RARYGKAQCEDDLAEKQRSNEVLRR 300

Query: 253 IQERYPQ 259
             E Y +
Sbjct: 301 AIETYQE 307



 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 25/80 (31%), Gaps = 17/80 (21%)

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
             +   +  +     +V +Y  SP  +  +       + LA K         +R   V  
Sbjct: 252 RKRGKIEEAVNAFEELVRKYPQSPRARYGKA---QCEDDLAEK---------QRSNEV-- 297

Query: 210 IPRFQLVLANYSDAEHAEEA 229
               +  +  Y +A    +A
Sbjct: 298 ---LRRAIETYQEAADLPDA 314


>gi|125628659|ref|NP_075553.2| aspartyl/asparaginyl beta-hydroxylase isoform 1 [Mus musculus]
 gi|81913588|sp|Q8BSY0|ASPH_MOUSE RecName: Full=Aspartyl/asparaginyl beta-hydroxylase; AltName:
           Full=Aspartate beta-hydroxylase; Short=ASP
           beta-hydroxylase; AltName: Full=Peptide-aspartate
           beta-dioxygenase
 gi|26326277|dbj|BAC26882.1| unnamed protein product [Mus musculus]
 gi|123122168|emb|CAM15539.1| aspartate-beta-hydroxylase [Mus musculus]
 gi|123210001|emb|CAM26695.1| aspartate-beta-hydroxylase [Mus musculus]
 gi|123228167|emb|CAM19153.1| aspartate-beta-hydroxylase [Mus musculus]
 gi|148673722|gb|EDL05669.1| aspartate-beta-hydroxylase, isoform CRA_c [Mus musculus]
 gi|189442061|gb|AAI67179.1| Aspartate-beta-hydroxylase [synthetic construct]
          Length = 741

 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 3/67 (4%)

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           E++      KRG+   A+  F+ ++  Y  +     A     +    LA    + EV+  
Sbjct: 327 ELDAAEKLRKRGKIEEAVNAFEELVRKYPQSP---RARYGKAQCEDDLAEKQRSNEVLRR 383

Query: 253 IQERYPQ 259
             E Y +
Sbjct: 384 AIETYQE 390



 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 25/80 (31%), Gaps = 17/80 (21%)

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
             +   +  +     +V +Y  SP  +  +       + LA K         +R   V  
Sbjct: 335 RKRGKIEEAVNAFEELVRKYPQSPRARYGKA---QCEDDLAEK---------QRSNEV-- 380

Query: 210 IPRFQLVLANYSDAEHAEEA 229
               +  +  Y +A    +A
Sbjct: 381 ---LRRAIETYQEAADLPDA 397


>gi|34556945|ref|NP_906760.1| hypothetical protein WS0523 [Wolinella succinogenes DSM 1740]
 gi|34482660|emb|CAE09660.1| conserved hypothetical protein [Wolinella succinogenes]
          Length = 319

 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 50/153 (32%), Gaps = 27/153 (17%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
                QS++   + S    +    VY++A  FL++     A                  K
Sbjct: 182 SATAPQSAQSAPVASNFSKQDNFTVYKEATEFLEQGKLPDAKARLE----------WTAK 231

Query: 96  SLLMSAFVQYSAGK-------YQQAASLGEEYITQYPESKNVDYVYYL-VGMSYAQMIRD 147
           +    A   Y  G+       Y+ A    +E  T Y      D   Y+   +  +     
Sbjct: 232 NQYKPASSNYLLGEIAFREKRYKDAIYYYKESATMY------DKADYMPRLLLNSAKSFT 285

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
              D+  +K   +++  IV  Y +S   K A+ 
Sbjct: 286 QTGDKENSK---RFLESIVSLYPDSSEAKEAKK 315



 Score = 35.1 bits (80), Expect = 9.8,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 31/78 (39%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y    +  +E+ +  A  Y+ + +  +  A    + LL SA      G  + +    E  
Sbjct: 241 YLLGEIAFREKRYKDAIYYYKESATMYDKADYMPRLLLNSAKSFTQTGDKENSKRFLESI 300

Query: 121 ITQYPESKNVDYVYYLVG 138
           ++ YP+S        L+G
Sbjct: 301 VSLYPDSSEAKEAKKLLG 318


>gi|315304677|ref|ZP_07874886.1| TPR domain-containing protein [Listeria ivanovii FSL F6-596]
 gi|313626951|gb|EFR95875.1| TPR domain-containing protein [Listeria ivanovii FSL F6-596]
          Length = 491

 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 57/146 (39%), Gaps = 15/146 (10%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL-M 99
             ++ +           +  +E+ V   ++Q   +A  Y  + S   P        +L  
Sbjct: 2   DKNKKILAKIYPFYPNGQFYFERGVEAFRDQRIKEAIRYLVRASELEPG----ESVILCQ 57

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
            A      G++ ++  L  + + +     N+DY YY +  ++A M        +  +  L
Sbjct: 58  LAICYTEIGQFHKSNQLLRDILEK--RDGNMDYCYYFIANNFAYM--------KDYRRAL 107

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVG 185
           QY +R +E  T+  Y + AR  + V 
Sbjct: 108 QYANRYLEMETDGDYAEEARDLIEVL 133


>gi|262192384|ref|ZP_06050537.1| GGDEF family protein [Vibrio cholerae CT 5369-93]
 gi|262031737|gb|EEY50322.1| GGDEF family protein [Vibrio cholerae CT 5369-93]
          Length = 578

 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 71/212 (33%), Gaps = 32/212 (15%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQ-CSRDFPFAG--VARKSLLMS 100
           D+ L  + D      +Y    L +     +  A +Y N+            +  +     
Sbjct: 126 DLLLSLLPDYVDPSGIYNDVGLLMGTLGQYESALDYLNKALEYRLEQGNPLLIAQVEHSL 185

Query: 101 AFVQYSAGKYQQAASLGEEYITQY--PES--KNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
               +  G+Y+++    E+    +  P +    + YV+  +G +Y ++   V  DQ    
Sbjct: 186 GDTYFKQGRYEESILYFEQ-AKAHLTPANYLFGLAYVHLGLGKAYIELNNFVEGDQ-HLF 243

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             L+Y++          +       +      LA           K  +Y  AI      
Sbjct: 244 QALEYVN---------QHKDQHLQGLIYL--SLAQAH-------FKEQKYAQAIDYANQA 285

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           +A  S++           +AY+ LA + EA +
Sbjct: 286 VA-ISESASLPR---IKAQAYLQLAKIAEAEQ 313


>gi|219685885|ref|ZP_03540691.1| tetratricopeptide repeat domain protein [Borrelia garinii Far04]
 gi|219672584|gb|EED29617.1| tetratricopeptide repeat domain protein [Borrelia garinii Far04]
          Length = 1179

 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 3/62 (4%)

Query: 60   VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            +Y KA + LK +N+  A   ++      P       + +  A     +G   QA S  E+
Sbjct: 1008 LYLKASINLKNENYPNAISLYSSVIEKNPEN---TSAYINLAKAYEKSGNKTQAISTLEK 1064

Query: 120  YI 121
             I
Sbjct: 1065 II 1066



 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 61/182 (33%), Gaps = 34/182 (18%)

Query: 96   SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
            ++   +  ++   K +++  +  + I   P  +  +Y  YL      +            
Sbjct: 973  AIYNLSIAKFENNKLEESLEIINKAINLNP--EKSEY-LYLKASINLKNENYPN------ 1023

Query: 156  KLMLQYMSRIVERYTN--SPYVKGARFYVTVGRNQLAAKEVE-------------IGRYY 200
               +   S ++E+     S Y+  A+ Y   G    A   +E             +G  Y
Sbjct: 1024 --AISLYSSVIEKNPENTSAYINLAKAYEKSGNKTQAISTLEKIINKNNKLALNNLGILY 1081

Query: 201  LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS---LIQERY 257
             K+  Y  AI  F+  + N        EA   L    + +     A++++     ++   
Sbjct: 1082 KKQKNYQKAIEIFEKAIKN-----SDIEAKYNLATTLIEINDNTRAKDLLKEYTKLKPNN 1136

Query: 258  PQ 259
            P+
Sbjct: 1137 PE 1138


>gi|254410362|ref|ZP_05024141.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC
           7420]
 gi|196182568|gb|EDX77553.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC
           7420]
          Length = 560

 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 22/143 (15%), Positives = 56/143 (39%), Gaps = 27/143 (18%)

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
             +  Y   +Y++A +  ++ +   P+     Y +Y  G++ + + R         +  +
Sbjct: 337 QGYALYHLERYEEAIASYDKALEIQPDDY---YAWYFRGIALSYLGR--------YEEAI 385

Query: 160 QYMSRIVERYTNSPYVK----GARFYVTVGRNQLAAK----EVEIGRYY--LKRGEYVAA 209
               + +E   +  Y       A  Y+      +A+     E++   YY    RG  ++ 
Sbjct: 386 ASYDKALEIQPDDYYAWYFRGIALSYLGRYEEAIASYDKALEIQPDDYYAWYFRGIALSY 445

Query: 210 IPRFQLVLANYSDAEHAEEAMAR 232
           + R++  +A+Y      ++A+  
Sbjct: 446 LGRYEEAIASY------DKALEI 462


>gi|206972232|ref|ZP_03233179.1| putative lipoprotein [Bacillus cereus AH1134]
 gi|229067935|ref|ZP_04201249.1| hypothetical protein bcere0025_1560 [Bacillus cereus F65185]
 gi|229188455|ref|ZP_04315502.1| hypothetical protein bcere0002_1560 [Bacillus cereus ATCC 10876]
 gi|206732806|gb|EDZ49981.1| putative lipoprotein [Bacillus cereus AH1134]
 gi|228595009|gb|EEK52781.1| hypothetical protein bcere0002_1560 [Bacillus cereus ATCC 10876]
 gi|228715144|gb|EEL67006.1| hypothetical protein bcere0025_1560 [Bacillus cereus F65185]
          Length = 254

 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 22/58 (37%), Gaps = 5/58 (8%)

Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-----YEKAVLFLKEQ 71
          + K  L     +AV   VG   + ++         V+ ++E+     + KA    K +
Sbjct: 1  MKKLILISSLVLAVGLGVGCSNEKTKKTDEPKKEAVQKEKELTAKDVFNKANEAFKNE 58


>gi|154150338|ref|YP_001403956.1| putative PAS/PAC sensor protein [Candidatus Methanoregula boonei
           6A8]
 gi|153998890|gb|ABS55313.1| putative PAS/PAC sensor protein [Methanoregula boonei 6A8]
          Length = 458

 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 20/153 (13%), Positives = 49/153 (32%), Gaps = 38/153 (24%)

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
            Y  GKY++A +  +  +   P      + ++  G+    + R+        +  L  +S
Sbjct: 313 YYREGKYEEAIAAFDRALEIEPSH---AWAWHDRGVCLRALERN--------EDALASIS 361

Query: 164 RIVERYTNSPYV----KGARFYVTVGRN---QLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
           + +E   +   +          + + R+    L+                 AA+  +  +
Sbjct: 362 KALELSPSDEEILFTCGATLQKLGILRDDNQILS-----------------AAVDAYNQL 404

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           L          +A   +     A+   D +R+ 
Sbjct: 405 LDKNP---SDADAWNNMGICVQAMGRDDLSRQY 434


>gi|153814972|ref|ZP_01967640.1| hypothetical protein RUMTOR_01187 [Ruminococcus torques ATCC 27756]
 gi|145847540|gb|EDK24458.1| hypothetical protein RUMTOR_01187 [Ruminococcus torques ATCC 27756]
          Length = 440

 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 10/76 (13%), Positives = 27/76 (35%), Gaps = 7/76 (9%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
            +    L   +++ A +  ++    +  +       ++LL  A     +G  + A    +
Sbjct: 358 AEGTQALNSGDYAGAIDPLSKVVLMNEGYNDG----QALLNLAQAYKGSGDNENATVYFQ 413

Query: 119 EYITQYPESKNVDYVY 134
           + I +Y  S+      
Sbjct: 414 KVIEKYAGSEYAAEAQ 429


>gi|146280922|ref|YP_001171075.1| HemY protein [Pseudomonas stutzeri A1501]
 gi|145569127|gb|ABP78233.1| HemY protein [Pseudomonas stutzeri A1501]
          Length = 406

 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 26/71 (36%), Gaps = 8/71 (11%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA---RKSLLMSAFVQYSAGKYQQAASLGEE 119
            A    +   ++++ E   +     P A +A    ++ L  A      G+Y +A +    
Sbjct: 125 AARAANELGEYAQSDELLQKAREREPEAALAIGLTQAQLQIA-----RGQYVEARASLSA 179

Query: 120 YITQYPESKNV 130
             + +P    V
Sbjct: 180 LQSDHPRHPYV 190


>gi|88603891|ref|YP_504069.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
 gi|88189353|gb|ABD42350.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
          Length = 328

 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 28/72 (38%), Gaps = 5/72 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y + + + ++ +F KA E F   + + P    A  +            ++  A    E  
Sbjct: 250 YVRGMAYYRQGDFKKAAEEFFAVTEEDPSNDKAWNA---YGICLTKLSEFASAERCYENA 306

Query: 121 ITQYPESKNVDY 132
           +  +P  +N+ Y
Sbjct: 307 LKIHP--ENMSY 316


>gi|11878110|gb|AAG40808.1|AF289486_1 aspartyl beta-hydroxylase 4.5 kb transcript [Mus musculus]
 gi|11878112|gb|AAG40809.1|AF289487_1 aspartyl beta-hydroxylase 6.6 kb transcript [Mus musculus]
          Length = 739

 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 3/67 (4%)

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           E++      KRG+   A+  F+ ++  Y  +     A     +    LA    + EV+  
Sbjct: 325 ELDAAEKLRKRGKIEEAVNAFEELVRKYPQSP---RARYGKAQCEDDLAEKQRSNEVLRR 381

Query: 253 IQERYPQ 259
             E Y +
Sbjct: 382 AIETYQE 388



 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 12/84 (14%), Positives = 24/84 (28%), Gaps = 25/84 (29%)

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
             +   +  +     +V +Y  SP  +  +       + LA K+                
Sbjct: 333 RKRGKIEEAVNAFEELVRKYPQSPRARYGKA---QCEDDLAEKQ---------------- 373

Query: 210 IPRFQLV----LANYSDAEHAEEA 229
             R   V    +  Y +A    +A
Sbjct: 374 --RSNEVLRRAIETYQEAADLPDA 395


>gi|75906778|ref|YP_321074.1| hypothetical protein Ava_0555 [Anabaena variabilis ATCC 29413]
 gi|75700503|gb|ABA20179.1| conserved hypothetical protein [Anabaena variabilis ATCC 29413]
          Length = 173

 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 10/82 (12%), Positives = 31/82 (37%), Gaps = 6/82 (7%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYS 106
           S   +   +  Y+      +   + +A E   +          + +  +  +       +
Sbjct: 2   STESLELAKTRYQAGKFAFENGQYREAVENLEKASALVARN--SRLGGEVEIWLVTAYEA 59

Query: 107 AGKYQQAASLGEEYITQYPESK 128
           AG+ + A +L ++ + ++P S+
Sbjct: 60  AGRTEDAIALCQQ-LRRHPHSE 80


>gi|307136074|gb|ADN33923.1| DNAJ heat shock N-terminal domain-containing protein [Cucumis melo
            subsp. melo]
          Length = 1337

 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 44/147 (29%), Gaps = 30/147 (20%)

Query: 62   EKAVLFLKEQNFSKAYEYFNQ-----CSRDFPFAGV-------ARKSLLMSAFVQYSAGK 109
                   ++  +++A E++            PF  V       A K+             
Sbjct: 1054 AAGNEAFQQGRYAEAVEHYTAALSCNVESR-PFTAVCFCNRAAAYKAQGQVIDA---IAD 1109

Query: 110  YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER- 168
               A +L EEY                   +  +MIRD        + ++   S+ +E+ 
Sbjct: 1110 CSLAIALDEEYFK----------AISRRA-TLYEMIRDYGQAANDLQKLVSLFSKELEKT 1158

Query: 169  --YTNSPYVKGARFYVTVGRNQLAAKE 193
              Y  S     +   +   R +LA  E
Sbjct: 1159 YQYATSDRSSTSTNDLRQTRLRLAEVE 1185


>gi|301624021|ref|XP_002941306.1| PREDICTED: FK506-binding protein-like [Xenopus (Silurana)
           tropicalis]
          Length = 272

 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 32/76 (42%), Gaps = 1/76 (1%)

Query: 24  LTIFFSIAVCFL-VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           +T+  ++A C + +G   ++ +        +  Y + +Y + V      ++  A + F  
Sbjct: 175 ITLLANLAACDVKMGRMSEAEKRCSRVLEKEPGYVKALYRRGVARAGMADWKGARKDFEA 234

Query: 83  CSRDFPFAGVARKSLL 98
             R  P    A++ LL
Sbjct: 235 LLRLDPTNKEAQRELL 250


>gi|299133771|ref|ZP_07026965.1| peptidase M48 Ste24p [Afipia sp. 1NLS2]
 gi|298591607|gb|EFI51808.1| peptidase M48 Ste24p [Afipia sp. 1NLS2]
          Length = 475

 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 18/118 (15%), Positives = 37/118 (31%), Gaps = 11/118 (9%)

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
               R +P +  +  +    A   Y  G  + A +  +  I   P +    Y Y L G +
Sbjct: 289 ETVYRRYPMSDNSLPARYARAIATYLHGDPRSAITQIDGLIKVEPANP---YFYELKGQA 345

Query: 141 YAQMIRDVPYDQRATKLMLQYMSR-------IVERYTNSPYVKGARFYVTVGRNQLAA 191
             +  R         +  +Q   +       + +    S     A   +++ +  LA 
Sbjct: 346 LLEGGRPTEAI-APFRKAVQLSHQAPLIEMLLGQALVASDNKAYANEAISILKAALAR 402


>gi|297380303|gb|ADI35190.1| Citron Rho-interacting kinase [Helicobacter pylori v225d]
          Length = 331

 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 61/145 (42%), Gaps = 19/145 (13%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS----RDFPFAGVARK 95
           R++     ++   D+  Q+E++++A+  LK++++++A E          R + +   A  
Sbjct: 189 RKTQEKTKVEFDKDLSKQKEIFQEALTLLKDKSYAEARERLLWLEANSYRLY-YVRYA-- 245

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
                  V Y   KY++A    +E      ++  +  + +    S+ ++  D  Y     
Sbjct: 246 ----LGEVAYGEKKYREAIKYYKESALLNKKASYMPVLLWHTAWSFKKIKDDQNY----- 296

Query: 156 KLMLQYMSRIVERYTNSPYVKGARF 180
               ++++ +   Y +S   K A+ 
Sbjct: 297 ---YKFLNTLQHLYPSSEQAKMAKK 318


>gi|158290263|ref|XP_311858.4| AGAP003019-PA [Anopheles gambiae str. PEST]
 gi|157017810|gb|EAA07937.4| AGAP003019-PA [Anopheles gambiae str. PEST]
          Length = 731

 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 26/66 (39%), Gaps = 6/66 (9%)

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG--KYQQAASLGEEYITQYPESKNVD 131
            +A     +       + ++R +LL  A+  +  G  KY +   +  +++        + 
Sbjct: 335 DEAANILERAIN----SVLSRNALLYFAYADFEEGRLKYDKVHQMYNKFLAINDIDPTLA 390

Query: 132 YVYYLV 137
           Y+ Y+ 
Sbjct: 391 YIQYMK 396


>gi|118395435|ref|XP_001030067.1| SLEI family protein [Tetrahymena thermophila]
 gi|89284355|gb|EAR82404.1| SLEI family protein [Tetrahymena thermophila SB210]
          Length = 2406

 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 45/117 (38%), Gaps = 14/117 (11%)

Query: 55   RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
            +Y    YE A ++ + +   +A +YF +     P   +   + +    +     +Y QA 
Sbjct: 1970 KYLETYYELATIYSECKMTEEAIDYFQKAIELDP---LYINAYIELGNLYLGKAEYDQAL 2026

Query: 115  SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
               ++ I   P+       Y  +G+ + +        Q+     ++Y ++ +E   N
Sbjct: 2027 ECYQKIIQINPQ---KAVAYNNIGLVHYK--------QKMDDKAIEYYNKALELDPN 2072


>gi|75911021|ref|YP_325317.1| hypothetical protein Ava_4825 [Anabaena variabilis ATCC 29413]
 gi|75704746|gb|ABA24422.1| Tetratricopeptide TPR_3 [Anabaena variabilis ATCC 29413]
          Length = 1009

 Score = 36.6 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 41/248 (16%), Positives = 86/248 (34%), Gaps = 50/248 (20%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSV-TDVRYQREVYEK--AVLFLKE--QNFSKA 76
             LT+  ++A   L      ++ +    +V  +   +  +Y+    V  L+   +NF +A
Sbjct: 6   IPLTLILALASPSLAQAPTPTAEEQITQAVILNSNGESLIYKDFFGVGELQAALENFQQA 65

Query: 77  YEYFNQCSRDFPFAGVARKS--LLMSAFVQYSAGKYQQAASLGE-----EYITQYPESKN 129
              F +      +   A ++  L+   +V +  G+Y +A    +        T+  +++ 
Sbjct: 66  LAIFKK------YGAKAGEANSLVNIGYVYFRKGEYGKALEYFQSSLDIRRKTRDRQNEW 119

Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT-NSPYVKGARFYVTVGRNQ 188
           +   Y  +G  Y  + +  P      +  L  +  +      +S Y    +         
Sbjct: 120 IPLSY--IGEVYVNLGQ-YPQALEYYQPALAIIKELKAANPKDSSYATSEKT-------L 169

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA----------MARLVEAYV 238
           LA    +IG  Y + G+Y  A       L  Y      ++A          +  +   YV
Sbjct: 170 LA----DIGAVYFRMGQYTKA-------LDFYQKTLAMQKADDDKIGGIQTLNNIGVVYV 218

Query: 239 ALALMDEA 246
            L    +A
Sbjct: 219 NLGNYKQA 226


>gi|331088542|ref|ZP_08337455.1| hypothetical protein HMPREF1025_01038 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|330407804|gb|EGG87298.1| hypothetical protein HMPREF1025_01038 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 440

 Score = 36.6 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 10/76 (13%), Positives = 27/76 (35%), Gaps = 7/76 (9%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
            +    L   +++ A +  ++    +  +       ++LL  A     +G  + A    +
Sbjct: 358 AEGTQALNSGDYAGAIDPLSKVVLMNEGYNDG----QALLNLAQAYKGSGDNENATVYFQ 413

Query: 119 EYITQYPESKNVDYVY 134
           + I +Y  S+      
Sbjct: 414 KVIEKYAGSEYAAEAQ 429


>gi|294055476|ref|YP_003549134.1| Peptidoglycan-binding lysin domain protein [Coraliomargarita
           akajimensis DSM 45221]
 gi|293614809|gb|ADE54964.1| Peptidoglycan-binding lysin domain protein [Coraliomargarita
           akajimensis DSM 45221]
          Length = 286

 Score = 36.6 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 43/128 (33%), Gaps = 15/128 (11%)

Query: 8   AICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLF 67
           AI    A  Y+L+     +   I +  L G    S   V +   TD +     Y++   +
Sbjct: 18  AILQRLALMYRLH-----VILPILILSLWGLSACSPGKVEIVRETDEKQ----YQRGQHY 68

Query: 68  LKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYS-AGKYQQAASLGEEYITQYP 125
                  +A + F             A +S L + ++         +A      YI   P
Sbjct: 69  KATGRIEEALDAFLGVIDSR----RDAPESHLEAGYIFLREMKDPMRANYHFNRYIELKP 124

Query: 126 ESKNVDYV 133
           +S+ V  V
Sbjct: 125 QSERVPQV 132


>gi|284041455|ref|YP_003391385.1| hypothetical protein Slin_6629 [Spirosoma linguale DSM 74]
 gi|283820748|gb|ADB42586.1| Tetratricopeptide TPR_2 repeat protein [Spirosoma linguale DSM 74]
          Length = 458

 Score = 36.6 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 12/110 (10%), Positives = 35/110 (31%), Gaps = 16/110 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
            +    ++  ++  A   +N    +    +     +L    + ++    Y+ A       
Sbjct: 171 ARGNCKMQLNDYKGALADYNLSLEK----SPNKPLALAGRGYARFKLEDYKNAILDFNRA 226

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           +     SK+   +YY  G+  +++           +  L    + V+   
Sbjct: 227 VEL---SKDDPELYYRRGLVKSRL--------GEFENALTDFDKTVQLNP 265


>gi|296125573|ref|YP_003632825.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
 gi|296017389|gb|ADG70626.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
          Length = 631

 Score = 36.6 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 62/217 (28%), Gaps = 31/217 (14%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
                 ++   ++ L E   S AY+  ++  R       A K+  +   +   +G    A
Sbjct: 188 EESDEALFYVGLIALNEGFQSVAYDTLSKLVRR-SKGEYADKAATILGDIYVISGDTDSA 246

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
                                YL  +  +    D           ++    I +      
Sbjct: 247 IE------------------MYLKSLVNSDTKPDSIRRLVKIYEQVEDYDGIKKV----- 283

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
           Y +            LA  E+     Y K   Y  AI  +   L    D  +  EA+  L
Sbjct: 284 YEQILEQNPNDIDTILALGEL-----YEKENAYDRAIKYYLK-LTKMKDYTNTYEAIGLL 337

Query: 234 VEAYVALALMDEAR-EVVSLIQERYPQGYWARYVETL 269
             +Y   +++ EA      ++        +   +E L
Sbjct: 338 ANSYYKGSMLKEAEANYKKILMADNKDDLYKTALERL 374


>gi|157123995|ref|XP_001654011.1| hypothetical protein AaeL_AAEL009703 [Aedes aegypti]
 gi|108874178|gb|EAT38403.1| conserved hypothetical protein [Aedes aegypti]
          Length = 289

 Score = 36.6 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 44/143 (30%), Gaps = 21/143 (14%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQ 104
             D + +     E+  +     K+ +F K+   + +  R  P    A +S+L    A  +
Sbjct: 107 EEDKLANKAKADELKAQGNELFKQGDFDKSANVYTEALRICPMEYSAERSILFANRAAAK 166

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM----SYAQMIRDVPYDQRATKLMLQ 160
                   A     + I   P+        YL  +    +  +    +          L+
Sbjct: 167 TKLNFKPSAIDDCTKAIEHNPK--------YLKALLRRATLYEEADKLD-------ESLE 211

Query: 161 YMSRIVERYTNSPYVKGARFYVT 183
              +I+E    +   K A   + 
Sbjct: 212 DFKKILELDPANVEAKAAEVRLA 234


>gi|26340240|dbj|BAC33783.1| unnamed protein product [Mus musculus]
          Length = 725

 Score = 36.6 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 3/67 (4%)

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           E++      KRG+   A+  F+ ++  Y  +     A     +    LA    + EV+  
Sbjct: 311 ELDAAEKLRKRGKIEEAVNAFEELVRKYPQSP---RARYGKAQCEDDLAEKQRSNEVLRR 367

Query: 253 IQERYPQ 259
             E Y +
Sbjct: 368 AIETYQE 374



 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 25/80 (31%), Gaps = 17/80 (21%)

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
             +   +  +     +V +Y  SP  +  +       + LA K         +R   V  
Sbjct: 319 RKRGKIEEAVNAFEELVRKYPQSPRARYGKA---QCEDDLAEK---------QRSNEV-- 364

Query: 210 IPRFQLVLANYSDAEHAEEA 229
               +  +  Y +A    +A
Sbjct: 365 ---LRRAIETYQEAADLPDA 381


>gi|151946795|gb|ABS19044.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 114 [Homo sapiens]
          Length = 721

 Score = 36.6 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 38/141 (26%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWXNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198
             ++    +    K     + +               QLA              +  I  
Sbjct: 151 QDVLXVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|325107952|ref|YP_004269020.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces
           brasiliensis DSM 5305]
 gi|324968220|gb|ADY58998.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces
           brasiliensis DSM 5305]
          Length = 585

 Score = 36.6 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 11/91 (12%), Positives = 36/91 (39%), Gaps = 8/91 (8%)

Query: 33  CFLVGWERQSSRDVYLDSVTDVRYQREVYEK-----AVLFLKEQNFSKAYEYFNQCSRDF 87
           C  +  +   + +     + + R    +  +     A  + +++N+  A E F +  R++
Sbjct: 150 CLSMNNQWDEAAEQLQKLMEEQRSNPMLLAELKLQLAYAYAQQKNYDGAIEIFEEQVREY 209

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
                A       +++   +G+ ++A +  +
Sbjct: 210 --GDSAEL-QSNLSYLYEHSGRLEKALAAAD 237


>gi|283782489|ref|YP_003373244.1| hypothetical protein Psta_4743 [Pirellula staleyi DSM 6068]
 gi|283440942|gb|ADB19384.1| Tetratricopeptide TPR_2 repeat protein [Pirellula staleyi DSM 6068]
          Length = 262

 Score = 36.6 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 30/211 (14%), Positives = 68/211 (32%), Gaps = 38/211 (18%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAAS 115
           + V + ++ N+  A + F       P +     +    A V +  G          QA S
Sbjct: 50  EGVNYFQQGNYQAAQKQFQSALAANPRSP---DAYYNLAAVYHKQGLSTRNQNDLAQAES 106

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
           L  + +   P   +        G++              T       + +      +P +
Sbjct: 107 LYRQCLDFNPNHVDC-----HRGLAVLL---------TETGRADLAFTEMKNWSIANPGL 152

Query: 176 KGARFYVTVGR-----NQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEE 228
             AR  +         N+ A + +   +  +    +   AA+ R +        +   ++
Sbjct: 153 SDARVELARLYEEYGDNRSAEQILYEAQA-IDINNWRAHAALGRIKE------QSGDVQQ 205

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           A+     AY       + +E ++++Q+R P 
Sbjct: 206 AILNYQRAYALNGNQPQFQERIAMLQQRAPG 236


>gi|296121481|ref|YP_003629259.1| alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal
           allergen [Planctomyces limnophilus DSM 3776]
 gi|296013821|gb|ADG67060.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Planctomyces limnophilus DSM 3776]
          Length = 679

 Score = 36.6 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 10/62 (16%), Positives = 22/62 (35%), Gaps = 3/62 (4%)

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRAT--KLM-LQYMSRIVERYTNSPYVKGARFYV 182
            S  V YV Y   ++   +  +   + +    +   L+ +   +  Y NS     A   +
Sbjct: 440 ASPLVPYVTYRRMLAQYSVEMNTANEAKRADIQKAWLESLEGFITTYPNSEDASEAMLQL 499

Query: 183 TV 184
            +
Sbjct: 500 AI 501


>gi|229176772|ref|ZP_04304174.1| hypothetical protein bcere0005_1570 [Bacillus cereus 172560W]
 gi|228606664|gb|EEK64083.1| hypothetical protein bcere0005_1570 [Bacillus cereus 172560W]
          Length = 254

 Score = 36.6 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 22/58 (37%), Gaps = 5/58 (8%)

Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-----YEKAVLFLKEQ 71
          + K  L     +AV   VG   + ++         V+ ++E+     + KA    K +
Sbjct: 1  MKKLILISSLVLAVGLGVGCSNEKTKKTDEPKKEAVQKEKELTAKDVFNKANEAFKNE 58


>gi|225156283|ref|ZP_03724761.1| hypothetical protein ObacDRAFT_8151 [Opitutaceae bacterium TAV2]
 gi|224803015|gb|EEG21260.1| hypothetical protein ObacDRAFT_8151 [Opitutaceae bacterium TAV2]
          Length = 741

 Score = 36.6 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 43/153 (28%), Gaps = 38/153 (24%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPE----SKNVDYVYYLVGMSYAQMIRDVPYD 151
             L  A   +  G+ ++A +   + +   P      K++  V              +  D
Sbjct: 512 VQLNRADALHRLGRLEEAIAACRQAVQLNPALPDAHKDLGLVL-------------LEND 558

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           Q           R  E    +           V                L RG+Y  AI 
Sbjct: 559 Q--LDEADAAFVRAGELAPGNGDA--VNLRGIVC---------------LIRGDYAGAIA 599

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
           RFQ  +  Y  A+    A   L  A+    L D
Sbjct: 600 RFQDAIELYGGAQSY--AHLSLHLAHRLTGLSD 630


>gi|213510886|ref|NP_001134029.1| DnaJ homolog subfamily C member 3 [Salmo salar]
 gi|209156216|gb|ACI34340.1| DnaJ homolog subfamily C member 3 precursor [Salmo salar]
          Length = 500

 Score = 36.6 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 30/239 (12%), Positives = 72/239 (30%), Gaps = 43/239 (17%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           +A  F++     KA       S+         ++    + + Y  G ++ + +   E + 
Sbjct: 193 RAECFIQMGEMGKAISDLTAASKL---KSDNTQAFYKLSTIYYHLGDHEMSLNEVRECLK 249

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVP--YDQRATKLMLQYMSRIVERYTN-SPYVKGAR 179
             P+ +   Y +Y       + I+       Q+     +     +++   N   Y   A+
Sbjct: 250 LDPDHEQC-YSHYKQVKKLNKQIQSAEELIQQQRYGDAVSKYESVIKTEPNVPQYSHHAK 308

Query: 180 FYVTVGRNQLAAKEVEI------------------------GRYYLKRGEYVAAIPRFQL 215
             +      LA ++ ++                           YL   +Y  AI  ++ 
Sbjct: 309 ERICHC---LAQEQQDVSRAITVCSEVLQSDPQNVNVLKDRAEAYLLDEQYEEAIKDYET 365

Query: 216 VLANYSDAEHAEEAMA----RLVEA-----YVALALMDEAREVVSLIQERYPQGYWARY 265
              +  +    +E +      L ++     Y  L +   A++   +   R     W   
Sbjct: 366 AREHSENDRQIKEGLEKAQRLLKQSQKRDYYKILGVKRTAQKKEIVKAYRKQAQQWHPD 424


>gi|187250949|ref|YP_001875431.1| putative Zn-dependent protease [Elusimicrobium minutum Pei191]
 gi|186971109|gb|ACC98094.1| Putative Zn-dependent protease [Elusimicrobium minutum Pei191]
          Length = 389

 Score = 36.6 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 49/157 (31%), Gaps = 30/157 (19%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++  ++LK  NF  A + F +    R  P +       L           Y +A    E 
Sbjct: 128 KRGQVYLKRDNFDLAVKDFEKYSSKRKKPNSFY-----LELGRSYLGNYNYDKAHKQFET 182

Query: 120 YITQYPESKN-------VDYV---------YYLVGMSY-------AQMIRDVPYDQRATK 156
           +I   P++         V+Y           +   ++         ++   V  D    +
Sbjct: 183 FIALEPKNHEGYFYLGRVEYARGNYDEAISLFSKAVNRNENYAPAYRLRGTVFKDIGDFE 242

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
             ++  ++++E   +  Y            N  AA E
Sbjct: 243 SAVEDFTKLIELLPDYSYYNRRGLVYEELGNLKAAAE 279


>gi|124516752|gb|EAY58260.1| probable cellulose synthase operon protein C [Leptospirillum
           rubarum]
          Length = 518

 Score = 36.6 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 23/188 (12%), Positives = 56/188 (29%), Gaps = 47/188 (25%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            +  ++A     G     SR   L   +      ++Y  A  ++   +  +A E++ +  
Sbjct: 14  VLSLTLATLVSGGLLSPESRTYAL---SGDEALGQLYRNARFWMNRGDLVRATEFWTRIL 70

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV-------------- 130
              P      ++L     V    G  ++A  L +     +P    +              
Sbjct: 71  HLRPNDP---RALTNLGIVAAQGGDLKKANILLDRLSRSHPGDPGIEKIRSAILLGKLDV 127

Query: 131 --------------------DYVYYLV------GMSYAQMIRDVPYDQRATKLMLQYMSR 164
                               DY  YL       G++  ++++         +  ++ + +
Sbjct: 128 KWLLLARKERKEQHFSAAYQDYERYLKGSPPRGGLA-LEVLQTESAVPDHFRNAVRGLRQ 186

Query: 165 IVERYTNS 172
           +  R+  S
Sbjct: 187 LAARHPES 194


>gi|295390525|ref|NP_001171320.1| aspartyl/asparaginyl beta-hydroxylase isoform 3 [Mus musculus]
 gi|123122169|emb|CAM15540.1| aspartate-beta-hydroxylase [Mus musculus]
 gi|123210002|emb|CAM26696.1| aspartate-beta-hydroxylase [Mus musculus]
 gi|123228168|emb|CAM19154.1| aspartate-beta-hydroxylase [Mus musculus]
          Length = 725

 Score = 36.6 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 3/67 (4%)

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           E++      KRG+   A+  F+ ++  Y  +     A     +    LA    + EV+  
Sbjct: 311 ELDAAEKLRKRGKIEEAVNAFEELVRKYPQSP---RARYGKAQCEDDLAEKQRSNEVLRR 367

Query: 253 IQERYPQ 259
             E Y +
Sbjct: 368 AIETYQE 374



 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 25/80 (31%), Gaps = 17/80 (21%)

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
             +   +  +     +V +Y  SP  +  +       + LA K         +R   V  
Sbjct: 319 RKRGKIEEAVNAFEELVRKYPQSPRARYGKA---QCEDDLAEK---------QRSNEV-- 364

Query: 210 IPRFQLVLANYSDAEHAEEA 229
               +  +  Y +A    +A
Sbjct: 365 ---LRRAIETYQEAADLPDA 381


>gi|77163933|ref|YP_342458.1| peptidase M48, Ste24p [Nitrosococcus oceani ATCC 19707]
 gi|254435569|ref|ZP_05049076.1| peptidase, M48 family [Nitrosococcus oceani AFC27]
 gi|76882247|gb|ABA56928.1| Peptidase M48, Ste24p [Nitrosococcus oceani ATCC 19707]
 gi|207088680|gb|EDZ65952.1| peptidase, M48 family [Nitrosococcus oceani AFC27]
          Length = 529

 Score = 36.6 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 42/127 (33%), Gaps = 18/127 (14%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFV 103
             L  +  V      Y++    L+E N  +A     +   + P     R++L   +   V
Sbjct: 277 AKLAPLRQVETAYAAYDQGRKALQEGNLEQALSLAERAITEEP-----REALFYGLRGDV 331

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
             +  +YQ+A +     I     + +  Y Y   G+    +          ++   Q + 
Sbjct: 332 YLARKRYQEALADYNRAIK---RNDHFFYFYNQRGLVNKAL--------GHSEKARQDLQ 380

Query: 164 RIVERYT 170
           + +    
Sbjct: 381 QSIALLP 387


>gi|332702707|ref|ZP_08422795.1| cell wall hydrolase/autolysin [Desulfovibrio africanus str. Walvis
           Bay]
 gi|332552856|gb|EGJ49900.1| cell wall hydrolase/autolysin [Desulfovibrio africanus str. Walvis
           Bay]
          Length = 593

 Score = 36.6 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 10/82 (12%), Positives = 25/82 (30%), Gaps = 5/82 (6%)

Query: 118 EEYITQYPESKNVDYV---YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
           E +   Y       Y     + +G  + ++           +  + Y  R+  R+ N  +
Sbjct: 70  EHFRRAYAGDPEGSYAPKSLFYLGRVHEELGLRSNRKDDFIR-AVDYFQRMSTRFPNHAW 128

Query: 175 VKGARFYVTVGR-NQLAAKEVE 195
              +          +L  K++ 
Sbjct: 129 TDDSLLRKAKINLERLGEKDLA 150


>gi|320161272|ref|YP_004174496.1| hypothetical protein ANT_18700 [Anaerolinea thermophila UNI-1]
 gi|319995125|dbj|BAJ63896.1| hypothetical protein ANT_18700 [Anaerolinea thermophila UNI-1]
          Length = 1053

 Score = 36.6 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 40/206 (19%), Positives = 74/206 (35%), Gaps = 27/206 (13%)

Query: 61  YEKAVLFL-KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y + V  L +     +A  +     + FP         L  A     + +Y +A  + + 
Sbjct: 9   YAREVENLIEHGQIEEAIAHAKNILKQFP--KYIEAYRL-LAKAYLESQRYTEAMDILQR 65

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            ++ +P+    D++ +L GMS   +IR+   D+      + +M R  E    +  V+   
Sbjct: 66  ILSVFPD----DFIAHL-GMS---IIRE---DEGNLDAAIWHMERAYEVQPFNRAVQDEL 114

Query: 180 FYVTVGRN-------QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
             +   R+       +L    +   R Y +   Y  AI   +  LA         + +  
Sbjct: 115 RRLYGRRDGVEPPRIRLTRGAL--VRMYDRGNLYPQAIAEIRAALAE---DGARLDLLVL 169

Query: 233 LVEAYVALALMDEAREVVSLIQERYP 258
           L   Y       EA EV S +  + P
Sbjct: 170 LARMYYLSGQKIEAAEVASSLISKLP 195


>gi|193785201|dbj|BAG54354.1| unnamed protein product [Homo sapiens]
          Length = 795

 Score = 36.6 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 26/207 (12%), Positives = 59/207 (28%), Gaps = 37/207 (17%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            KAV +L+++++++A E+     +      V   +    + + Y    + QA+S  +  I
Sbjct: 429 NKAVTYLRQKDYNQAVEFLKVLEKKD--NRVKSAAATNLSALYYMGKDFAQASSYAD--I 484

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS--------- 172
               +       Y L  ++          D    +   ++    +    +S         
Sbjct: 485 AVNSDR------YNLAALTNKGNTVFANGD---YEKAAEFYKEALRN--DSSCTEALYNI 533

Query: 173 ----------PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
                              +       A    +I   Y        AI     V++    
Sbjct: 534 GLTYEKLNRLDEALDCFLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPT 593

Query: 223 AEHAEEAMARLVEAYVALALMDEAREV 249
                  +++L E Y       +A + 
Sbjct: 594 DPQV---LSKLGELYDREGDKSQAFQY 617


>gi|86748544|ref|YP_485040.1| TPR repeat-containing protein [Rhodopseudomonas palustris HaA2]
 gi|86571572|gb|ABD06129.1| TPR repeat protein [Rhodopseudomonas palustris HaA2]
          Length = 221

 Score = 36.6 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 39/114 (34%), Gaps = 13/114 (11%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSA 107
           S T       +  +A + ++ + F  A +  +   +  P    G  R++ +      Y  
Sbjct: 94  SQTSSDTTALLMSRAKVAMEAKQFDVAVKLLDAVVKLRPDYIEGWNRRATI-----FYLQ 148

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY-AQMIRDVPYDQRATKLMLQ 160
            +Y ++    E+ + + P          L G+    Q + D      A +  L 
Sbjct: 149 NEYARSLGDIEQVLAREPRHFGA-----LAGLGMIMQELGDDKRALDAFRKALA 197


>gi|78780092|ref|YP_398204.1| TPR repeat-containing protein [Prochlorococcus marinus str. MIT
           9312]
 gi|78713591|gb|ABB50768.1| TPR repeat [Prochlorococcus marinus str. MIT 9312]
          Length = 262

 Score = 36.6 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 38/95 (40%), Gaps = 3/95 (3%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
           +G   Q+ +D       D +    +Y  A +      + KA + F++ +   P   +AR 
Sbjct: 113 LGLWSQAKKDYMFVISQDNKNFSALYNLANVEGSASQWEKARDLFSKAATYNPGFAMARS 172

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           S+   A   +  G   ++    ++ I +YP   + 
Sbjct: 173 SM---ALADFQLGNIDESEKELKKLIRRYPTFADA 204


>gi|113475342|ref|YP_721403.1| hypothetical protein Tery_1657 [Trichodesmium erythraeum IMS101]
 gi|110166390|gb|ABG50930.1| TPR repeat [Trichodesmium erythraeum IMS101]
          Length = 594

 Score = 36.6 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 36/103 (34%), Gaps = 29/103 (28%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV---------ARKS-LLMSAFVQ------ 104
           Y +A+   +  N++KA        R   +  +         A ++     A+        
Sbjct: 100 YNQALQ--ESPNYTKA-----YVERSAAYTKLGKHSIAIEDADRAIQFEPAYANAYVQRA 152

Query: 105 ---YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
              +    YQQA S+ +  +   P   N+   YY  G  + Q+
Sbjct: 153 DVDFRLNNYQQAISIYDRGLRLNP---NLPLAYYDQGRCFLQL 192


>gi|325929583|ref|ZP_08190697.1| hypothetical protein containing a divergent form of TPR repeats
           [Xanthomonas perforans 91-118]
 gi|325540093|gb|EGD11721.1| hypothetical protein containing a divergent form of TPR repeats
           [Xanthomonas perforans 91-118]
          Length = 251

 Score = 36.6 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 45/132 (34%), Gaps = 19/132 (14%)

Query: 64  AVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           A   L   ++++A E++       +         +L  A  Q+  G+ QQ     +  I 
Sbjct: 95  AETLLARGDYAQAAEHYQGALRGLY---RDDPHLMLGLARAQFGLGQPQQTRQTLDALIA 151

Query: 123 QYPESKNVDYVYYLVG-MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
             P  ++ D      G + YA+ +         T+  L     + + Y      + AR  
Sbjct: 152 ANPSFRSHD------GHLLYARAVEGS----GDTEAALHEYETLAQGYP----GEEARVR 197

Query: 182 VTVGRNQLAAKE 193
                 ++A  +
Sbjct: 198 YAQLLQRIARND 209


>gi|260857634|ref|YP_003231525.1| cellulose synthase subunit [Escherichia coli O26:H11 str. 11368]
 gi|260870256|ref|YP_003236658.1| cellulose synthase subunit [Escherichia coli O111:H- str. 11128]
 gi|257756283|dbj|BAI27785.1| cellulose synthase subunit [Escherichia coli O26:H11 str. 11368]
 gi|257766612|dbj|BAI38107.1| cellulose synthase subunit [Escherichia coli O111:H- str. 11128]
 gi|323154038|gb|EFZ40244.1| cellulose synthase operon protein C [Escherichia coli EPECa14]
          Length = 1140

 Score = 36.6 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 77/236 (32%), Gaps = 36/236 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 426 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 482

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 483 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 539

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197
             Q         +  +V R   S  V      +   G+   A             ++ + 
Sbjct: 540 RAQWN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 593

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 594 DWAQQRRDYTAARAAYQNVLTLEPT---NADAILGLTEVDIAAGDTAAARSQLAKL 646



 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 339 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 395

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 396 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 441

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 442 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 490

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + ++ P      Y   L
Sbjct: 491 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 520


>gi|170094584|ref|XP_001878513.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164646967|gb|EDR11212.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 815

 Score = 36.6 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 29/99 (29%), Gaps = 16/99 (16%)

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEE----YITQYPESKNVDYVYYLVGMSYAQMIRD 147
               +LL    V +    + +A    +E    Y      +  V    +L+         D
Sbjct: 471 WLPLALLRLGTVYFRLNDFPKAIEALQEALGLYEKLNDLN-WVAQAQFLLA--------D 521

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
           +   +    +  Q  S   +R+     V  AR      R
Sbjct: 522 IARLRGEHAVAFQLFSEAYKRF---EDVDDARNMAACLR 557


>gi|126656924|ref|ZP_01728102.1| hypothetical protein CY0110_02059 [Cyanothece sp. CCY0110]
 gi|126621762|gb|EAZ92471.1| hypothetical protein CY0110_02059 [Cyanothece sp. CCY0110]
          Length = 270

 Score = 36.6 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 59/206 (28%), Gaps = 37/206 (17%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            +    + +     A   FN+     P    A    L         GKY+ A +     +
Sbjct: 79  NRGNARVSQNKLEAAIADFNEAIELAP---DAPDPYLNRGTALEGQGKYEAAIADYNRVL 135

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              P             M+Y     +    Q   +  L    + VE   N  + +     
Sbjct: 136 ELNPND----------AMAYNNR-GNAESGQGDWEKALTDYQKAVEIAPNFAFARANAAL 184

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
           V+           +IG    K+GE   AI   + ++  Y        A+         + 
Sbjct: 185 VSY----------QIG----KKGE---AITEMRNLVRKYPMFPDMRAAL---TAVLWNMG 224

Query: 242 LMDEARE--VVSL-IQERYPQGYWAR 264
              EA    V ++ +  RY    W +
Sbjct: 225 QQGEAESHWVAAVGMDNRYQDLDWVK 250


>gi|291539745|emb|CBL12856.1| Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine
           kinase./HAMP domain [Roseburia intestinalis XB6B4]
          Length = 485

 Score = 36.6 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 28/64 (43%), Gaps = 3/64 (4%)

Query: 128 KNVDYVYYLVGMSY--AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           +++DYV Y++ ++   A+ + D    Q+  K   +    + E   +S Y K     +   
Sbjct: 61  EDIDYVMYIIVVNSERAEELVDTQKPQKMIKEAREVFGELAED-ADSAYAKQRLSRILKS 119

Query: 186 RNQL 189
            + L
Sbjct: 120 LDTL 123


>gi|284051331|ref|ZP_06381541.1| TPR repeat-containing protein [Arthrospira platensis str. Paraca]
          Length = 526

 Score = 36.6 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 23/203 (11%), Positives = 52/203 (25%), Gaps = 41/203 (20%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           ++ A   L++    +A   +NQ   + P +                 GK  +A +   + 
Sbjct: 6   FDTANQLLRKGQLDEAIASYNQAIAESPQSAW---YYHNLGEALSQQGKIDEAIAAYRQA 62

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS-------- 172
               P S                 +  +   Q      +    + +E   +         
Sbjct: 63  TELNPNSAW-----------SYDNLGTLLNQQGNLPEAVSCFRKAIELDPDFSEFYHNLA 111

Query: 173 ---------PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
                                 +   A     +G+ Y ++ +Y  A+  ++  L      
Sbjct: 112 LVLIKEGRLEEAVSLLQKAIELKADDAELYHSLGKAYQQQQQYSEAVTAYRQGLELNP-- 169

Query: 224 EHAEEAMARLVEAYVALALMDEA 246
                      + Y++L    EA
Sbjct: 170 --------YWSDCYLSLGQTLEA 184


>gi|262402222|ref|ZP_06078783.1| tPR domain protein putative component of TonB system [Vibrio sp.
           RC586]
 gi|262351004|gb|EEZ00137.1| tPR domain protein putative component of TonB system [Vibrio sp.
           RC586]
          Length = 326

 Score = 36.6 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 21/58 (36%), Gaps = 8/58 (13%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA--FVQYSAGKYQQAASLGEE 119
           A L L+E ++ +A    +Q           R++ +  A     Y   + + A    + 
Sbjct: 246 AQLLLQEGDYEQALAELDQVKERD------RQAQVALAKTRALYKLNQLEAALLQAKR 297


>gi|300772310|ref|ZP_07082180.1| OmpA family protein [Sphingobacterium spiritivorum ATCC 33861]
 gi|300760613|gb|EFK57439.1| OmpA family protein [Sphingobacterium spiritivorum ATCC 33861]
          Length = 301

 Score = 36.6 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 28/90 (31%), Gaps = 10/90 (11%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSS----RDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
           + +  L I   ++  FL            +  Y    T+ R   + Y++  L L E    
Sbjct: 2   MKQSVLPISILLSGLFLTSCVSSGKFKSLQTDYDKLQTEHRDLAQKYQQGQLDLTEGRTR 61

Query: 75  KAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
              +   +      +   A  + L  A+  
Sbjct: 62  --IKSLEE---QLAY-EKANNAQLKEAYAN 85


>gi|119505471|ref|ZP_01627544.1| hypothetical protein MGP2080_08494 [marine gamma proteobacterium
           HTCC2080]
 gi|119458749|gb|EAW39851.1| hypothetical protein MGP2080_08494 [marine gamma proteobacterium
           HTCC2080]
          Length = 396

 Score = 36.6 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 20/55 (36%), Gaps = 3/55 (5%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           A    +   + +A  YFN+     P      ++ L  A   Y  G+ Q A    E
Sbjct: 319 ARSAYESGEYQQAINYFNKAISLAP---YLHEAQLGIAQSLYETGELQGAKKALE 370


>gi|157368400|ref|YP_001476389.1| cellulose synthase subunit BcsC [Serratia proteamaculans 568]
 gi|157320164|gb|ABV39261.1| cellulose synthase operon C domain protein [Serratia proteamaculans
           568]
          Length = 1157

 Score = 36.6 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 77/224 (34%), Gaps = 62/224 (27%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY-----SAGKYQQAASL 116
           ++A    +++ + +A E + +  +  P             +  Y      AG+ +QA +L
Sbjct: 469 QQAEQLAQQKQWHQAAEKYRRAQQMDPDDVW-------LTY-HYAQTLRQAGQPEQADAL 520

Query: 117 GEEYITQYPESKNV--DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
                 +   +  +   Y  YL G            DQ      L  ++ +     ++ +
Sbjct: 521 FSRLAQKQRGNPQLTYAYALYLSG---------SDRDQ----QALAQLNTL----PSAQW 563

Query: 175 VKGARF-----YVTVG-----RNQLAAKE-----------------VEIGRYYLKRGEYV 207
               R       +        R + A  E                 +++  + L RG+Y 
Sbjct: 564 NDNMRELAQRLKMQATLEHAERLRAAGDEPGAVAYLHRQPADTRIDLQLADWALARGDYD 623

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
           AA+  +Q V     +     +A    +EAYVA   ++EAR+ + 
Sbjct: 624 AALADYQRVRVREPN---NPDARLGEIEAYVAQGKLNEARQRLQ 664


>gi|110805283|ref|YP_688803.1| tetratricopeptide repeat-containing protein [Shigella flexneri 5
           str. 8401]
 gi|110614831|gb|ABF03498.1| putative heat shock protein [Shigella flexneri 5 str. 8401]
          Length = 371

 Score = 36.6 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 62/186 (33%), Gaps = 36/186 (19%)

Query: 64  AVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
              ++    + +A + FNQ     DF    + +   +  A       ++Q+A  + E  +
Sbjct: 96  GRDYMAAGLYDRAEDMFNQLTDETDFRIGALQQLLQIYQA-----TSEWQKAIDVAERLV 150

Query: 122 TQYPESKNVDYVYYL--VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
               + + V+  ++   + + +     D+       K              NS       
Sbjct: 151 KLGKDKQRVEIAHFYCELALQHM-ASDDLDRAMTLLKKGAAADK-------NS------- 195

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                     A   + +GR ++ +GEY  A+   Q V++   D E   E +  L   Y  
Sbjct: 196 ----------ARVSIMMGRVFMAKGEYAKAVESLQRVIS--QDRELVSETLEMLQTCYQQ 243

Query: 240 LALMDE 245
           L    E
Sbjct: 244 LGKTAE 249


>gi|109096285|ref|XP_001097194.1| PREDICTED: RNA polymerase II-associated protein 3 isoform 1 [Macaca
           mulatta]
          Length = 665

 Score = 36.6 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 46/143 (32%), Gaps = 21/143 (14%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D +    + EK   + K+  + +A + + +     P+  V        A   +   K+  
Sbjct: 129 DSQKALVLKEKGNKYFKQGKYDEAIDCYTKGMDADPYNPVLPT---NRASAYFRLKKFAV 185

Query: 113 AASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           A S     I       N  Y   Y   G +   + +         +   +   R++E   
Sbjct: 186 AESDCNLAIAL-----NRSYTKAYSRRGAARFALQK--------LEEAKKDYERVLELEP 232

Query: 171 NSPYVKGARFYVTVGRNQLAAKE 193
           N+     A   +      LA+KE
Sbjct: 233 NN---FEATNELRKINQALASKE 252


>gi|37519855|ref|NP_923232.1| hypothetical protein gvip023 [Gloeobacter violaceus PCC 7421]
 gi|35210846|dbj|BAC88227.1| ycf37 [Gloeobacter violaceus PCC 7421]
          Length = 173

 Score = 36.6 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 56/179 (31%), Gaps = 31/179 (17%)

Query: 24  LTIFFSIAVCFLVGWER--------------QSSRDVYLDSVTDVRYQREVYEKAVLFLK 69
           L IF+ I +  L+GW                     +           ++ YE    +L+
Sbjct: 5   LRIFYLIGLAALLGWLAWQVFRQVRRNVGVEGVINKLQPKVKGGQASAQDYYELGCAYLE 64

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
           ++ +  A E F +  +  P    A  +     F  +   +Y  A    ++ +   P    
Sbjct: 65  KRLYMDATENFKKALQAEP--EFAE-AHNNLGFCHFQQRQYDLAIREYKDAVRFKP---- 117

Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
            DYV  L  + +A  ++            L+   +++     +     A       R +
Sbjct: 118 -DYVSALNNLGHALEMKG------QALQALEAYDQVLTLQPAN---ATAERRARALRKR 166


>gi|218438974|ref|YP_002377303.1| hypothetical protein PCC7424_2005 [Cyanothece sp. PCC 7424]
 gi|218171702|gb|ACK70435.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424]
          Length = 512

 Score = 36.6 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 41/132 (31%), Gaps = 24/132 (18%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           Y       K + + +A + +++      D+  A   R   L          +Y +A    
Sbjct: 400 YGLGYSLNKLERYQEAIKSYDKALEFKSDYHEAWYGRGVSLR------RLERYDEAIQSY 453

Query: 118 EEYITQYPESKNVDYVYY--LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
           ++ +   P +       Y    G+S   + R         +  ++   + +E   N  Y 
Sbjct: 454 DKALEIDPNNP-----LYWNSRGLSLQNLKR--------YEEAIKSYDKALEIDPNFDYA 500

Query: 176 KGARFYVTVGRN 187
              R  +    N
Sbjct: 501 IENRQRLLHILN 512


>gi|213964202|ref|ZP_03392438.1| SprE [Capnocytophaga sputigena Capno]
 gi|213953169|gb|EEB64515.1| SprE [Capnocytophaga sputigena Capno]
          Length = 832

 Score = 36.6 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 1/56 (1%)

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
           AI R + VLA+    E    A+  L + Y       +A    S +   YP   +A+
Sbjct: 566 AIQRLERVLASNPTPEIEAAALYELQKNYTDTH-NSKAETTKSRLLANYPNTDYAK 620



 Score = 35.9 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 58/173 (33%), Gaps = 21/173 (12%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
              + + A    E  +   P    ++        +  ++ ++               SR+
Sbjct: 559 KFKENELAIQRLERVLASNPT-PEIE------AAALYELQKNYT--DTHNSKAETTKSRL 609

Query: 166 VERYTNSPYVK--GARFYVTVGRNQLAAKEVEI----GRYYLKRGEYVAAIPRFQLVLAN 219
           +  Y N+ Y K           RN++A   V +     +Y   RGE++    R Q     
Sbjct: 610 LANYPNTDYAKLLQGGETTQHERNKIAQ--VFVDSLTAQY--NRGEFIETARRLQEEGLQ 665

Query: 220 YSDAEHAEEAMARL-VEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           Y +   A  A+A L  +    L  +   +  +  I   YP    +   + L++
Sbjct: 666 YRETAAAP-AIALLQAKTTARLEGLAPYQAQLQQIATNYPATAESEEAKNLLE 717


>gi|209526186|ref|ZP_03274717.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
 gi|209493442|gb|EDZ93766.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
          Length = 276

 Score = 36.6 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 73/247 (29%), Gaps = 48/247 (19%)

Query: 24  LTIFFSIAVCFL---------VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
           L +F ++  C+L         + W    +    +  ++      E+ E+A    +   F+
Sbjct: 5   LILFLTVVFCWLWLGVVSPYNLAWAATDTVGETVAEIS-TLSLDELLERAFATSQAGRFA 63

Query: 75  KAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
           +A  Y+ +    +P      + +  +       S  +  +A       I   P       
Sbjct: 64  EAENYWTEIINRYPDNPAMWSNRGNIRV-----SQNRLTEAIGDYNRAIELAPT---AAD 115

Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
            Y   G++Y  + R            +   +R +E          A  Y   G N  A +
Sbjct: 116 PYLNRGVAYEGLGRWSD--------AIADYNRTLELSP-----SDAIAYNNRG-NAEAGQ 161

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           E            + AAI  +        +      A A    A        EA   +  
Sbjct: 162 E-----------NWEAAIADYFQAAELDPNYAF---ARANYALALYQTGETKEAIRNIKN 207

Query: 253 IQERYPQ 259
           +  +YP 
Sbjct: 208 LIRKYPN 214



 Score = 36.2 bits (83), Expect = 5.2,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 27/72 (37%), Gaps = 9/72 (12%)

Query: 62  EKAVLFLKEQNFSKAY-EYFNQ--CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
            +      ++N+  A  +YF       ++ F      +    A   Y  G+ ++A    +
Sbjct: 153 NRGNAEAGQENWEAAIADYFQAAELDPNYAF------ARANYALALYQTGETKEAIRNIK 206

Query: 119 EYITQYPESKNV 130
             I +YP   ++
Sbjct: 207 NLIRKYPNFADM 218


>gi|172035397|ref|YP_001801898.1| hypothetical protein cce_0481 [Cyanothece sp. ATCC 51142]
 gi|171696851|gb|ACB49832.1| unknown [Cyanothece sp. ATCC 51142]
          Length = 252

 Score = 36.6 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 22/168 (13%), Positives = 54/168 (32%), Gaps = 43/168 (25%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP----- 88
            ++G   QSS      S+  V    E+ ++ +   ++ N+  A + FNQ     P     
Sbjct: 41  VIMGCNHQSSSIPIESSLLTVDTV-EMVQQGIEKSRQGNYEAAVDDFNQVLAQNPQDINA 99

Query: 89  -------FAGVAR-------------------KSLLMSAFVQYSAGKYQQAASLGEEYIT 122
                  ++ + +                   ++ +    V    G+ ++A S  E+ + 
Sbjct: 100 YFNRGFAYSSLGQFEQALADFTKVLKLDPQMVQAYVNRGNVYLQLGEDEKAISDYEKALK 159

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
             P      +    +G+++            + +L     ++ V    
Sbjct: 160 INPND---AFAQNNLGLAHLNS--------GSPELAKIDFTQAVTIDP 196


>gi|171687120|ref|XP_001908501.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943521|emb|CAP69174.1| unnamed protein product [Podospora anserina S mat+]
          Length = 523

 Score = 36.6 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 34/102 (33%), Gaps = 18/102 (17%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           +A+ +     F +A + F + S          K L     +  + G+++QA    +  + 
Sbjct: 12  EALKYYDNNEFDEALQAFERISD-------TSKILFNMGVINATLGQHEQAVECYQRAVK 64

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
                + +   Y+  G+S   +           +  L   + 
Sbjct: 65  L---DRYLAVAYFQQGVSNFLL--------GDFEEALANFND 95


>gi|91086811|ref|XP_973640.1| PREDICTED: similar to fleer [Tribolium castaneum]
 gi|270009704|gb|EFA06152.1| hypothetical protein TcasGA2_TC008997 [Tribolium castaneum]
          Length = 650

 Score = 36.6 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 6/70 (8%)

Query: 66  LFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
             +K+  F  A +  +      P +   R  L + A+  +    +  AAS  EE    YP
Sbjct: 18  TLIKDNRFPDAIKILHGI----PESNSTRAGLSLLAYCYFYIQDFNNAASYYEELTQMYP 73

Query: 126 ESKNVDYVYY 135
             +N DY  Y
Sbjct: 74  --ENNDYKLY 81


>gi|85859797|ref|YP_461999.1| TPR repeat-containing protein [Syntrophus aciditrophicus SB]
 gi|85722888|gb|ABC77831.1| tetratricopeptide repeat domain containing protein [Syntrophus
           aciditrophicus SB]
          Length = 663

 Score = 36.6 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 50/170 (29%), Gaps = 50/170 (29%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y +A L ++++ +        + +R FP                Y     + A +  E 
Sbjct: 135 LYSQAELDMQKEAWGDVVAKLKKVNRIFP---------------NYEDTTARLARAEQES 179

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
                          Y  G+S ++        Q   KL  Q    ++E   N  Y   A+
Sbjct: 180 AKQL-----------YQQGLSLSK--------QDEWKLAAQAFKSVIELVPN--YYDVAK 218

Query: 180 FYVTVG-------RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
            +            N  A K +        R  +  A+  F+  L    +
Sbjct: 219 LHQEAISRDSFDYFNSEAEKAIH-------RQNWARAVFLFEKALEYQPE 261


>gi|67608936|ref|XP_666914.1| phosphoprotein phosphatase -related [Cryptosporidium hominis TU502]
 gi|54657990|gb|EAL36686.1| phosphoprotein phosphatase -related [Cryptosporidium hominis]
          Length = 525

 Score = 36.6 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 16/137 (11%), Positives = 38/137 (27%), Gaps = 29/137 (21%)

Query: 63  KAVLFLKEQNFSKAYEYFN-QCSRDFPFAG---------VARKSLLMSAFVQYSAGKYQQ 112
           K     K   +++A EY+                      + ++L            +  
Sbjct: 20  KGNESFKSGKYNEAIEYYTLAIKTSQASNETQNKNLHIYYSNRAL-----CHIRLENFGS 74

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A     E I   P        YY  G++Y  +++          L  +    ++     +
Sbjct: 75  AIEDSGESIKCCPSFSK---AYYRRGIAYFNLLKYS--------LARKDFMMVLNL---T 120

Query: 173 PYVKGARFYVTVGRNQL 189
              + A+  + +    +
Sbjct: 121 QNDRDAQSKIQICTKLI 137


>gi|294667769|ref|ZP_06732979.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292602395|gb|EFF45836.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 837

 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 22/153 (14%), Positives = 45/153 (29%), Gaps = 23/153 (15%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
           +     D  T        Y        E  +  A ++F +     P   +A    +    
Sbjct: 400 NSPALPDVTTSSLDALRAYALGQQRYSEGKYVAALDFFQKAVDIDPHFALAWLGQVR--- 456

Query: 103 VQYSAGKYQQAASL---GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
             ++   Y++A       E++ ++ P  +      Y+   S+   I D            
Sbjct: 457 AHFANVDYKKATETLRVAEQFKSRLPPRE----ALYVK--SWGVQILDPA-------QAA 503

Query: 160 QYMSRIVERYTNSPYVK-GARFYVT-VGRNQLA 190
               ++ E Y +  Y    A   +     N+ A
Sbjct: 504 DSWIQMAELYPD--YAPAQANAAMDLFVANRFA 534


>gi|229112565|ref|ZP_04242102.1| TPR domain protein [Bacillus cereus Rock1-15]
 gi|228670945|gb|EEL26252.1| TPR domain protein [Bacillus cereus Rock1-15]
          Length = 515

 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 76/224 (33%), Gaps = 53/224 (23%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           E+A  +++     +A       ++D+P  ++G         A   + +G   +A  L E 
Sbjct: 167 EEANRYIRNGQLEEAIATLEIVTKDYPEFWSGHN-----NLAIAHFQSGNVDKALKLTEM 221

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS------- 172
            + + P +        +  +    +     Y     K +     ++V  Y  S       
Sbjct: 222 ILEKNPGN--------IHALCNTLIFL---YSIGEHKQVEALAGQLVSVYPISFEHRLKL 270

Query: 173 -------PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA--------AIPRFQLVL 217
                   Y + A  +  + + Q    E ++  YY     Y A        A   +Q V+
Sbjct: 271 GTTLATIGYFEHAYKWFKLLKRQ--GYEGDVSFYYWF--AYSAYMVKDQQLAEKMWQYVV 326

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVV-SLIQERYPQG 260
             + D +          E + AL L DE + V+   +++ + Q 
Sbjct: 327 ELHPDKKG--------KEPWNALNLTDEGQNVLFEELRKSFQQS 362


>gi|218961281|ref|YP_001741056.1| hypothetical protein; putative signal peptide [Candidatus
           Cloacamonas acidaminovorans]
 gi|167729938|emb|CAO80850.1| hypothetical protein; putative signal peptide [Candidatus
           Cloacamonas acidaminovorans]
          Length = 361

 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 24/57 (42%), Gaps = 3/57 (5%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           + E    +  + N+++A +YF +     P       +L+  +   Y    Y++A S 
Sbjct: 199 LMEMGTFYYNKGNYAEAVKYFEKARPQIPTN---IDNLMNISACYYELKDYEKAMSA 252


>gi|326436271|gb|EGD81841.1| kinesin light chain isoform 1 [Salpingoeca sp. ATCC 50818]
          Length = 659

 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 23/68 (33%), Gaps = 12/68 (17%)

Query: 61  YEK-AVLFLKEQNFSKAYEYFNQ--------CSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           Y      +  + ++ +A  ++ +             P       S L      YS G+Y 
Sbjct: 223 YNNLGSAYHSKGDYDRAIAFYEKALAIRVEMLGEKHPSTA---DSYLGLGNAYYSKGEYD 279

Query: 112 QAASLGEE 119
           +A +  E+
Sbjct: 280 KAIAFYEK 287


>gi|325523298|gb|EGD01652.1| family 2 glycosyl transferase [Burkholderia sp. TJI49]
          Length = 644

 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 10/70 (14%), Positives = 24/70 (34%), Gaps = 10/70 (14%)

Query: 62  EKAVLFLKEQNF---SKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASL 116
             A      ++    +KA ++     +       A+ + L    A+V +  G+  +A   
Sbjct: 81  NAAYAAFHHKDRRFRAKAAKHLRTLLQHH-----AQDAELHSKLAYVYFYLGENDKALEH 135

Query: 117 GEEYITQYPE 126
            +  +   P 
Sbjct: 136 AKRSVQLNPR 145


>gi|320581103|gb|EFW95325.1| General transcriptional co-repressor [Pichia angusta DL-1]
          Length = 860

 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 21/68 (30%), Gaps = 9/68 (13%)

Query: 61  YEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           Y    +++ +Q++  AYE F          P              + Y   +Y+ A    
Sbjct: 288 YYLGRVYMSKQDYPNAYEAFQHAVNIDSRNP-TFWC-----SIGVLYYKISQYKDALDAY 341

Query: 118 EEYITQYP 125
              I   P
Sbjct: 342 TRAIRLNP 349


>gi|299744482|ref|XP_001831066.2| DnaJ domain-containing protein [Coprinopsis cinerea okayama7#130]
 gi|298406147|gb|EAU90688.2| DnaJ domain-containing protein [Coprinopsis cinerea okayama7#130]
          Length = 594

 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 38/130 (29%), Gaps = 21/130 (16%)

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           +  L  A      G +  A     + +   P S        L G+      R        
Sbjct: 255 RVELELA-----RGSWDAAGIAANDALRLSPNSPE---ALTLRGLVLFLTGRLSS----- 301

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
               L ++   +         +  R  V    ++L  +    G  + KRG  V A+ R+ 
Sbjct: 302 ---SLTHLQNALRLDPGHEKAQKLRKRVKDV-DRLKEE----GNVFFKRGGLVEAVERYT 353

Query: 215 LVLANYSDAE 224
             L     +E
Sbjct: 354 EALEKIGQSE 363


>gi|251791828|ref|YP_003006548.1| protein 1057 [Aggregatibacter aphrophilus NJ8700]
 gi|247533215|gb|ACS96461.1| protein 1057 [Aggregatibacter aphrophilus NJ8700]
          Length = 204

 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 40/107 (37%), Gaps = 7/107 (6%)

Query: 13  EAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN 72
           +AW  + YKF +  F  IA   + GW    S  +         Y++ ++  A      ++
Sbjct: 15  KAWWNENYKFIIVCFV-IAFGGVFGWNYWQSHQIQKIHSASAEYEQALFNYA------KD 67

Query: 73  FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
                E F+Q  ++      A  +LL  A +      +  A    ++
Sbjct: 68  PKAQAEQFSQFIKNHEKTSYAVLALLDKAKIAVENNDFTLAEDALKQ 114


>gi|226490843|ref|NP_001149123.1| LOC100282745 [Zea mays]
 gi|195624896|gb|ACG34278.1| suppressor of G2 allele of SKP1 [Zea mays]
          Length = 361

 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 28/86 (32%), Gaps = 12/86 (13%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQA 113
              ++  KA     + +F  A E ++Q     P      A ++           G Y +A
Sbjct: 2   AASDLESKAKEAFVDDDFELATELYSQAIDAGPATADLYADRAQ-----AHIKLGNYTEA 56

Query: 114 ASLGEEYITQYP-ESKNVDYVYYLVG 138
            +   + I   P   K     YY  G
Sbjct: 57  VADANKAIELDPMMHK----AYYRKG 78


>gi|219684521|ref|ZP_03539464.1| TPR domain protein [Borrelia garinii PBr]
 gi|219685809|ref|ZP_03540618.1| TPR domain protein [Borrelia garinii Far04]
 gi|219671883|gb|EED28937.1| TPR domain protein [Borrelia garinii PBr]
 gi|219672642|gb|EED29672.1| TPR domain protein [Borrelia garinii Far04]
          Length = 379

 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 71/212 (33%), Gaps = 36/212 (16%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           K+ N+ KA  Y+ +C    P       +L        +   Y++A  + EEY+   PE+ 
Sbjct: 70  KKNNYDKAIVYYQRCLVKHPNNNY---ALFGLGDCYRNLDDYKKATDIWEEYLKYDPENI 126

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV--------KGARF 180
               V   V  SY ++        +  +   Q   +++E    + Y            + 
Sbjct: 127 T---VLTRVAASYRKL--------KNFQKSKQTYLKVMELMPENDYALVGIGHLYYDFKE 175

Query: 181 YVTVGRNQLAAKEVE-----------IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
           Y    +  L   E+            IG  Y K  E+   I  F+  L     +     A
Sbjct: 176 YKEALKYWLKMYELNQSKVDVRVLTSIGNCYRKLREFTRGIYFFKKALEI---SPSNFYA 232

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +  L + Y       EA +    I E+ P+  
Sbjct: 233 VFGLADCYRGNKDYKEALKYWLDIVEKDPKNN 264


>gi|223940517|ref|ZP_03632365.1| Peptidoglycan-binding LysM [bacterium Ellin514]
 gi|223890798|gb|EEF57311.1| Peptidoglycan-binding LysM [bacterium Ellin514]
          Length = 261

 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 19/145 (13%), Positives = 46/145 (31%), Gaps = 15/145 (10%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA--RKSLLMSAFVQYSAGKYQQAASLGEEY 120
                +   +F  A + F +  +  P +  A    + L              A    E++
Sbjct: 27  TGKSQVNSMDFQSAIDSFEKALQVNPRSASAHFELAWLYEGD---KIDDPAAAIYHYEQF 83

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +   P S   D V   +     ++   V    + +    + + +++         K  + 
Sbjct: 84  LKLRPNSDKTDVVKMHINSCKQKIASSVSVIGQMSPERQRELEKLL------AENKDLKE 137

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGE 205
            V   +++++  E     YY+ R  
Sbjct: 138 QVAALKDRVSKWE----AYYVSRQA 158


>gi|158339402|ref|YP_001520579.1| TPR domain-containing protein [Acaryochloris marina MBIC11017]
 gi|158309643|gb|ABW31260.1| TPR domain protein [Acaryochloris marina MBIC11017]
          Length = 1346

 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 71/207 (34%), Gaps = 38/207 (18%)

Query: 64  AVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
            +L+  +  + +A   FN         P    + +      FV ++  +YQ A +   + 
Sbjct: 761 GMLYHSQGRYQEALAQFNQGIAIDPKNPIN-YSGQ-----GFVYFAQKQYQDAIAAHTKA 814

Query: 121 ITQYPESKNVDY-----VY-----YLVGMSYA-QMIRDVPYDQ---RATKLMLQYMSRIV 166
           I   P+S N DY     VY     Y   ++   + IR  P D             +++  
Sbjct: 815 IELEPDSAN-DYFSRANVYITTQQYQDAIADLTKAIRLAPPDPIYFNNRGDAYDALNQ-- 871

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA--NYSD-- 222
                +     ++       N  A   + +G  Y +  +Y  AI +F   +   ++    
Sbjct: 872 ---PEAALADYSQAIEVDKNNTRAY--IGLGTVYQRARQYQRAIAQFDKAIEVADFPQKL 926

Query: 223 -AEHAEEAMARLVEA--YVALALMDEA 246
             +   + +A       Y  L  +++A
Sbjct: 927 ETDKKYKGLAYSARGFLYSDLGKLEQA 953



 Score = 36.2 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 8/67 (11%), Positives = 21/67 (31%), Gaps = 10/67 (14%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           +   +Y +A +  +  I   P   ++   +Y   + Y          Q         + +
Sbjct: 561 WRLEQYAEALAAFDRAIQLNPSFVHL--AWYGKALVY--------RSQENFPAAETALLK 610

Query: 165 IVERYTN 171
           ++    N
Sbjct: 611 VLNLKPN 617


>gi|150398795|ref|YP_001322562.1| hypothetical protein Mevan_0035 [Methanococcus vannielii SB]
 gi|150011498|gb|ABR53950.1| Tetratricopeptide TPR_2 repeat protein [Methanococcus vannielii SB]
          Length = 402

 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 54/157 (34%), Gaps = 32/157 (20%)

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
           Y  GKY++A     + +    E+ N    YYL G S  ++          TKL  ++  +
Sbjct: 23  YKLGKYEKAIEKANKVLNIGSENSN---AYYLKGSSCWRL--------GKTKLAKEFFEK 71

Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
            +     +          +   N L              G +   I      L N S+  
Sbjct: 72  ALTYEPENI---KFIQKYSSLLNYL--------------GNFRETIN----FLTNLSNLT 110

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             EE +  L +AY  L   ++A +    I E +P+  
Sbjct: 111 DKEEILEILGDAYENLGNFEKAVDCYEKILEIFPKNN 147


>gi|91086913|ref|XP_971407.1| PREDICTED: similar to protein phosphatase-5 [Tribolium castaneum]
 gi|270009672|gb|EFA06120.1| hypothetical protein TcasGA2_TC008963 [Tribolium castaneum]
          Length = 489

 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 47/155 (30%), Gaps = 30/155 (19%)

Query: 51  VTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFP-----FAGVARKSLLMSAFVQ 104
             ++    E Y  +A  + K+QN++ A E + +     P     +           +F  
Sbjct: 12  TPELVEAGERYKAEANEYFKKQNYNAAIELYTKAIEANPNVAIYYG--------NRSFAY 63

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
                +  A +   + I       +  YV  +Y    ++  +           K  L+  
Sbjct: 64  LKTECFGYALADASKAIEL-----DKGYVKGFYRRAAAHMSL--------GKFKEALKDY 110

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLA-AKEVEI 196
             + +   N    K           +LA  K + +
Sbjct: 111 EYVTKVRPNDKDAKSKYTECNKIVKKLAFEKAISV 145


>gi|302391014|ref|YP_003826834.1| SpoIID/LytB domain protein [Acetohalobium arabaticum DSM 5501]
 gi|302203091|gb|ADL11769.1| SpoIID/LytB domain protein [Acetohalobium arabaticum DSM 5501]
          Length = 708

 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 61/189 (32%), Gaps = 28/189 (14%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           TD       Y+   L+     +++A +   Q         + + + L  A +      Y 
Sbjct: 106 TDSDEHSVYYDLGELYYSLGKYNQALKNTKQAVEYIENEAILKLAYLKLAQIHKERSDYH 165

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            A S  ++ +       +    YY     Y+  I+D   DQ   +  +    + + +   
Sbjct: 166 LALSAVKQALKL---DPDSAVAYY-----YSGQIKDR-LDQ--LQEAVADYKQALNKD-- 212

Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
                                ++++   Y K  +Y  A   ++ +L    + + A+  + 
Sbjct: 213 ---------------GSFVEAQLDLADDYFKLEKYKEAKKLYKKILERNGEFKIAQTRLD 257

Query: 232 RLVEAYVAL 240
           R+ E    L
Sbjct: 258 RIEEIKPDL 266


>gi|297262050|ref|XP_001101625.2| PREDICTED: transmembrane and TPR repeat-containing protein 1-like
           [Macaca mulatta]
          Length = 882

 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 28/230 (12%), Positives = 59/230 (25%), Gaps = 64/230 (27%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A     +    +A  ++    + +P    A  +L              +A    ++ 
Sbjct: 487 YNYANFLKDQGRNKEAIYHYRTALKLYPRHASALNNLGTLI------RDTAEAKMYYQKA 540

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +  +P+        + +G        ++   Q   +  +  +   ++          A  
Sbjct: 541 LQLHPQHNR---ALFNLG--------NLLKSQEKKEEAITLLKDSIKYGPE---FADAYS 586

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF--------------------QLVLANY 220
            +      LA +E    R+      Y A I                       +  +A+Y
Sbjct: 587 SLASL---LAEQE----RFKEAEEIYQAGIKNCPDSSDLHNNYGVFLVDTGLPEKAVAHY 639

Query: 221 SD----AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
                 +     AM  L   Y +L     A E             W +  
Sbjct: 640 QQAIKLSPSHHVAMVNLGRLYRSLGENSMAEE-------------WYKRA 676


>gi|224060578|ref|XP_002190113.1| PREDICTED: similar to leprecan-like 1 [Taeniopygia guttata]
          Length = 655

 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 19/39 (48%), Gaps = 1/39 (2%)

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNV-DYVYYLVGM 139
           F  Y  G Y +A    + Y+  +P+ ++V +   Y  G+
Sbjct: 261 FAYYRVGDYVKALECAKSYLLFHPDDEDVLENAGYYKGL 299


>gi|256004184|ref|ZP_05429167.1| TPR repeat-containing protein [Clostridium thermocellum DSM 2360]
 gi|281419440|ref|ZP_06250454.1| TPR repeat-containing protein [Clostridium thermocellum JW20]
 gi|255991774|gb|EEU01873.1| TPR repeat-containing protein [Clostridium thermocellum DSM 2360]
 gi|281406846|gb|EFB37110.1| TPR repeat-containing protein [Clostridium thermocellum JW20]
 gi|316939648|gb|ADU73682.1| Tetratricopeptide TPR_1 repeat-containing protein [Clostridium
           thermocellum DSM 1313]
          Length = 591

 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 29/70 (41%), Gaps = 5/70 (7%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y K V     + +++A E +N+     P F    +++ L  +       K+++A     +
Sbjct: 68  YNKGVALFNLKKYNEAIESYNRSIELAPNF----KEAYLNKSICLLVVSKFEEALETVNK 123

Query: 120 YITQYPESKN 129
           +I   P   N
Sbjct: 124 FIEMSPNEPN 133



 Score = 35.9 bits (82), Expect = 6.1,   Method: Composition-based stats.
 Identities = 13/119 (10%), Positives = 35/119 (29%), Gaps = 18/119 (15%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQ 112
               + + +     +     +A + +N+     P       + +        ++  KY +
Sbjct: 28  DSAMQYFSEGNSLFEAGKIEEAIQSYNKAIELNP-----NLAEIHYNKGVALFNLKKYNE 82

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           A       I   P  K     Y    +    + +         +  L+ +++ +E   N
Sbjct: 83  AIESYNRSIELAPNFKE---AYLNKSICLLVVSK--------FEEALETVNKFIEMSPN 130


>gi|91201886|emb|CAJ74946.1| hypothetical protein kuste4184 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 423

 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 63/201 (31%), Gaps = 33/201 (16%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
             ++L       A   F++ +   P    A  +        Y  G    A +  ++ I  
Sbjct: 198 GQIYLNNGLPDNALNAFSKVTEINP--RHA-LAHYHLGLTFYEKGNVDGAVASYKKSIEI 254

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
             ++     V+Y +G+ Y+        D++     ++    +V+   ++     A + + 
Sbjct: 255 DAKNPQ---VHYSLGIVYS--------DEKLFDNAIEEFRTVVKLDPDN---ADAHYRLG 300

Query: 184 VG-------------RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
           +                + A+    I   Y  +     AI   Q+ +       +  E  
Sbjct: 301 LAYANKRTLVKAVSSVQKAASAHYNIKNPYSDKRALDEAITSLQMAIEINP---YNPEIY 357

Query: 231 ARLVEAYVALALMDEAREVVS 251
             L  AY     +DEA   + 
Sbjct: 358 FDLGNAYSQDRRLDEAARALE 378


>gi|186684576|ref|YP_001867772.1| hypothetical protein Npun_F4462 [Nostoc punctiforme PCC 73102]
 gi|186467028|gb|ACC82829.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102]
          Length = 160

 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 42/116 (36%), Gaps = 18/116 (15%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASL 116
           E+ +++   L     ++A        +D P FA    R++ L      YS G YQ++ + 
Sbjct: 42  EIIDRSQKLLDAGEIAEAETALTALIKDQPDFAEAWNRRAFL-----YYSIGDYQKSLAD 96

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
            +  +   P         + +G+ YA +              ++   R +E    S
Sbjct: 97  CQMVVQINPIHFG---ALHGMGLCYAAL--------GEYGEAIRAFKRALEIQPYS 141


>gi|317501592|ref|ZP_07959786.1| hypothetical protein HMPREF1026_01730 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|316897009|gb|EFV19086.1| hypothetical protein HMPREF1026_01730 [Lachnospiraceae bacterium
           8_1_57FAA]
          Length = 440

 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 10/76 (13%), Positives = 27/76 (35%), Gaps = 7/76 (9%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
            +    L   +++ A +  ++    +  +       ++LL  A     +G  + A    +
Sbjct: 358 AEGTQALNSGDYAGAIDPLSKVVLMNEGYNDG----QALLNLAQAYKGSGDNENATVYFQ 413

Query: 119 EYITQYPESKNVDYVY 134
           + I +Y  S+      
Sbjct: 414 KVIEKYAGSEYAAEAQ 429


>gi|301614003|ref|XP_002936487.1| PREDICTED: hypothetical protein LOC100494861 [Xenopus (Silurana)
           tropicalis]
          Length = 434

 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 38/124 (30%), Gaps = 26/124 (20%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYF-NQC-----SRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           R++ E  + +++E N++KA E F            + F           ++       Y 
Sbjct: 126 RQLAELGINYVQEGNYTKAVELFSEAIGLDPEDYRY-FG--------NRSYCYEQLKLYP 176

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           +A    E  I     S +    Y+  G    + +R             +    +++   N
Sbjct: 177 EALMDAEVSIEL---SPDCPKGYFRKG----RALRGCSR----IVEAEEAFKMVLQLDQN 225

Query: 172 SPYV 175
               
Sbjct: 226 CEEA 229


>gi|261414452|ref|YP_003248135.1| TPR repeat-containing protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261370908|gb|ACX73653.1| TPR repeat-containing protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302327530|gb|ADL26731.1| tetratricopeptide repeat protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 347

 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 60/196 (30%), Gaps = 34/196 (17%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
              + + KA     +  + ++ +Y+     D         +           GK + A  
Sbjct: 42  AADDFFFKANELYDQGRYKESVKYYRAAIDD---GRYEPFAWFNLGNALVQLGKKEVAMV 98

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
             +  +   P+        ++       ++ D+ Y   +    +   +R +E  T + ++
Sbjct: 99  AYKRTVELLPD--------FVKA---WMLLGDLYYLAESPSDAIVAYNRAIELGTETDHI 147

Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
                               +   Y+K  ++  A   F+  LA   D     +A   L E
Sbjct: 148 -----------------HFALAECYMKGSDWTLAQKHFERALALNPD---RMDAWYGLAE 187

Query: 236 AYVALALMDEAREVVS 251
            Y  L   + A + + 
Sbjct: 188 VYEKLGDYEYAVKTLK 203


>gi|240146185|ref|ZP_04744786.1| putative tetratricopeptide repeat-containing domain protein
           [Roseburia intestinalis L1-82]
 gi|257201719|gb|EEV00004.1| putative tetratricopeptide repeat-containing domain protein
           [Roseburia intestinalis L1-82]
          Length = 454

 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 35/89 (39%), Gaps = 9/89 (10%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           SL    +  Y++ K++++ +  ++ +      K+  Y  Y +  +Y              
Sbjct: 373 SLYNQGYSDYNSQKFEESITSLQKVVDMEETYKD-GYALYYLAQAY--------RKNNDL 423

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTV 184
           +    Y  +IVE Y  +     A+ Y+ +
Sbjct: 424 ETAKTYYQKIVELYPGTERAANAQNYINI 452


>gi|170062990|ref|XP_001866910.1| TPR repeat-containing protein [Culex quinquefasciatus]
 gi|167880758|gb|EDS44141.1| TPR repeat-containing protein [Culex quinquefasciatus]
          Length = 1128

 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 40/110 (36%), Gaps = 18/110 (16%)

Query: 158 MLQYMSRIVERYTNSPYVKGA-------RFYVTVGRNQLAA-KE---------VEIGRYY 200
            L    +++     + +           +  +   R+  A  +E         + I   Y
Sbjct: 631 ALAIYKQVLRNDPKNIWAANGIGAVLAHKGCIIEARDIFAQVREATADFCDVWLNIAHIY 690

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
           +++ +Y++AI  ++  L  +    +  + M  L  AY     + EA+  +
Sbjct: 691 VEQKQYISAIQMYENCLKKFYKHNNV-DVMQYLARAYFRAGKLKEAKMTL 739


>gi|125975528|ref|YP_001039438.1| TPR repeat-containing protein [Clostridium thermocellum ATCC 27405]
 gi|125715753|gb|ABN54245.1| TPR repeat domain containing protein [Clostridium thermocellum ATCC
           27405]
          Length = 591

 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 29/70 (41%), Gaps = 5/70 (7%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y K V     + +++A E +N+     P F    +++ L  +       K+++A     +
Sbjct: 68  YNKGVALFNLKKYNEAIESYNRSIELAPNF----KEAYLNKSICLLVVSKFEEALETVNK 123

Query: 120 YITQYPESKN 129
           +I   P   N
Sbjct: 124 FIEMSPNEPN 133



 Score = 35.9 bits (82), Expect = 6.1,   Method: Composition-based stats.
 Identities = 13/119 (10%), Positives = 35/119 (29%), Gaps = 18/119 (15%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQ 112
               + + +     +     +A + +N+     P       + +        ++  KY +
Sbjct: 28  DSAMQYFSEGNSLFEAGKIEEAIQSYNKAIELNP-----NLAEIHYNKGVALFNLKKYNE 82

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           A       I   P  K     Y    +    + +         +  L+ +++ +E   N
Sbjct: 83  AIESYNRSIELAPNFKE---AYLNKSICLLVVSK--------FEEALETVNKFIEMSPN 130


>gi|11692645|gb|AAG39913.1|AAG39913 aspartly beta-hydroxylase [Mus musculus]
          Length = 689

 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 3/67 (4%)

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           E++      KRG+   A+  F+ ++  Y  +     A     +    LA    + EV+  
Sbjct: 275 ELDAAEKLRKRGKIEEAVNAFEELVRKYPQSP---RARYGKAQCEDDLAEKQRSNEVLRR 331

Query: 253 IQERYPQ 259
             E Y +
Sbjct: 332 AIETYQE 338



 Score = 36.2 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 25/80 (31%), Gaps = 17/80 (21%)

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
             +   +  +     +V +Y  SP  +  +       + LA K         +R   V  
Sbjct: 283 RKRGKIEEAVNAFEELVRKYPQSPRARYGKA---QCEDDLAEK---------QRSNEV-- 328

Query: 210 IPRFQLVLANYSDAEHAEEA 229
               +  +  Y +A    +A
Sbjct: 329 ---LRRAIETYQEAADLPDA 345


>gi|95931319|ref|ZP_01314034.1| TPR repeat [Desulfuromonas acetoxidans DSM 684]
 gi|95132620|gb|EAT14304.1| TPR repeat [Desulfuromonas acetoxidans DSM 684]
          Length = 718

 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 23/184 (12%), Positives = 55/184 (29%), Gaps = 41/184 (22%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYF---NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
            ++   A   L++ N ++A + +    +            +S    A +    GK ++A 
Sbjct: 5   DKILAAAQKHLQKNNLARAVKEYLKVLKIDDRD------VRSRQKLAELYSRLGKTEEAL 58

Query: 115 SLGEEYITQYPESKNVDYV---YYLVGMSYAQMIRDVP--------------YDQRATKL 157
           +  E        +    Y    +YL  ++  + ++ +                 Q     
Sbjct: 59  TEYE--------TVAAHYAENTFYLKAIAVYKQMQKLDPQNTAYTLKLAKLNEQQGLVGN 110

Query: 158 MLQYMSRIV---ERYTNSPYVKGARFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPR 212
            L     ++   ++Y            +      N      ++   +Y K  +   AI  
Sbjct: 111 ALSEYRVLLQHHQQYQEHDEAIKVLLRMQELDPENITIG--MQTAEFYAKIDKTDEAIQA 168

Query: 213 FQLV 216
           F+ V
Sbjct: 169 FEKV 172


>gi|116622913|ref|YP_825069.1| TPR repeat-containing serine/threonin protein kinase [Candidatus
           Solibacter usitatus Ellin6076]
 gi|116226075|gb|ABJ84784.1| serine/threonine protein kinase with TPR repeats [Candidatus
           Solibacter usitatus Ellin6076]
          Length = 947

 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 10/68 (14%), Positives = 24/68 (35%), Gaps = 5/68 (7%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR----KSLLMSAFVQYSAGKYQQAAS 115
           +Y +   +LK     +A   F +      F  ++      + L        +G   +A +
Sbjct: 860 IYVRGEAYLKAHQSVQAAAEFQKIVD-HRFLVLSDCIGALAHLELGRAYAMSGDLAKAKA 918

Query: 116 LGEEYITQ 123
              +++T 
Sbjct: 919 AYNDFLTL 926


>gi|58265542|ref|XP_569927.1| phosphoprotein phosphatase [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134108853|ref|XP_776541.1| hypothetical protein CNBC0350 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50259221|gb|EAL21894.1| hypothetical protein CNBC0350 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57226159|gb|AAW42620.1| phosphoprotein phosphatase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 586

 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 57/177 (32%), Gaps = 25/177 (14%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQR--EVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
           S+A   L               +T+    +  E+   A    K++NFSK+ +++ Q    
Sbjct: 50  SLAGLSLGSDGVFEPEVDDNKVITEEETAKALELKALANKAFKDKNFSKSIDFYTQAIAL 109

Query: 87  FPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYA 142
            P        +++      +    ++  A S   + +   P      Y   +Y  G+S  
Sbjct: 110 NPKEPTFWNNRAM-----SKAKMEEHGGAISDATKAVELNPS-----YAKAFYRRGLSQL 159

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA-AKEVEIGR 198
            ++R            +    + +     +  ++      T    ++   K + +G 
Sbjct: 160 AILRPTD--------AVSDFKKALAIEPGNKTIRDQLSITTKLIRRIEFEKAISVGE 208


>gi|332993197|gb|AEF03252.1| beta-lactamase class C family protein [Alteromonas sp. SN2]
          Length = 469

 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 3/73 (4%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           + VY D+       R + E  +  LK +++++A++ F      FP    A ++    AF 
Sbjct: 373 KQVYNDNGYSRFIGRTINEVGMGLLKTKSWTEAFDMFEYLVSLFPN---APQAYDSLAFA 429

Query: 104 QYSAGKYQQAASL 116
             S G  + A S 
Sbjct: 430 YLSKGDSEAAKST 442


>gi|330840509|ref|XP_003292257.1| hypothetical protein DICPUDRAFT_50293 [Dictyostelium purpureum]
 gi|325077520|gb|EGC31227.1| hypothetical protein DICPUDRAFT_50293 [Dictyostelium purpureum]
          Length = 981

 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 48/139 (34%), Gaps = 29/139 (20%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A +   + N+ KA + + +  +    +       L   +  +  G+  +A    +  +  
Sbjct: 178 ACILFNKGNYIKALDTYQKVIQQN--SNCLPAVRLGLGYCYFKLGRNNKAKEAFKRVLEL 235

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY---TNSPYVKGARF 180
                + D V  ++G+S   ++ D   D        + M+ I+E Y     +P       
Sbjct: 236 -----DRDNVEAMIGLSLV-LMNDNQID--------EAMNLILEAYQLAPTNP------- 274

Query: 181 YVTVGRNQLAAKEVEIGRY 199
              +  N LA      G +
Sbjct: 275 ---IVLNHLANHYFYRGEF 290


>gi|315122115|ref|YP_004062604.1| hypothetical protein CKC_01825 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495517|gb|ADR52116.1| hypothetical protein CKC_01825 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 296

 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 68/222 (30%), Gaps = 42/222 (18%)

Query: 22  FALTIFFSIAVCFLVGW--ERQSSRDVYLDSVTDVRYQREVYE-KAVLFLKEQNFSKAYE 78
             +++   I  CFL+     ++++       V       EVY  + V+     +F K+ +
Sbjct: 35  LVVSLISLIQGCFLLDGVRSKRANISSLNSVVHAHPSDPEVYNVRGVVHGMNGDFEKSLQ 94

Query: 79  YFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            F       P  +     ++L+      Y  G    A    +  +   P   N D  Y  
Sbjct: 95  DFQSALDLNPSYYKAYVNRALIE-----YKMGNVPMAIKDYDAALKINP---NYDIAYIG 146

Query: 137 VGMSYAQMIRDVPYDQR--ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
            G  Y         D++   ++       R ++  T+       R  V   R      + 
Sbjct: 147 RGNVY--------RDEKYGDSQKAFADFDRAIQLKTSDGRAWFGRALVYQLRK---EHQK 195

Query: 195 EI--------------GRYYLKRG-EYVAAIPRFQLVLANYS 221
            I                YY  RG  Y+A    +   L ++ 
Sbjct: 196 AIGDFSRAISLSAITPADYYNGRGVSYLAVKN-YDSALEDFK 236


>gi|253583593|ref|ZP_04860791.1| predicted protein [Fusobacterium varium ATCC 27725]
 gi|251834165|gb|EES62728.1| predicted protein [Fusobacterium varium ATCC 27725]
          Length = 144

 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 8/63 (12%), Positives = 25/63 (39%), Gaps = 2/63 (3%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK--SLLMSAFVQYSAGKYQQAASL 116
           +++ +     +  N+ +A   F    + + F+ + +   +        Y  G+++ A   
Sbjct: 49  DIFIQGKNAYRNGNYEEAQSKFETLLKSYSFSPILKNNYAFYFIGMTYYKMGEWKNAVYY 108

Query: 117 GEE 119
            E+
Sbjct: 109 LEK 111


>gi|242241287|ref|YP_002989468.1| cellulose synthase operon C domain protein [Dickeya dadantii
           Ech703]
 gi|242133344|gb|ACS87646.1| cellulose synthase operon C domain protein [Dickeya dadantii
           Ech703]
          Length = 1331

 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 54/182 (29%), Gaps = 36/182 (19%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           S R        DV     +  +A   L   N ++A     Q  + FP  G      L  A
Sbjct: 445 SVRQSVTPKPVDVSDP--LRAQAKQELAAGNTARAIGLLQQGMQRFPNDGW---VRLDLA 499

Query: 102 FVQYSAGKYQQAASLGEEYITQYP-ESKNV-DYVYYLVGMSYAQMIRDVPYDQRATKLML 159
            +    G    AA+L +      P +  N      Y   +  ++                
Sbjct: 500 RIYRQQGDTASAATLMQ------PLQRPNATPDDLYAAALFASES------------EAW 541

Query: 160 QYMSRIVERYT---NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP--RFQ 214
           Q  S ++ R      +  V+     V          ++   + YL RGE  AA    R  
Sbjct: 542 QQSSSLLTRIPPRNQNQAVRDLSQRVNF------NLQMATAQVYLSRGENAAAANTLRAL 595

Query: 215 LV 216
            V
Sbjct: 596 TV 597


>gi|240146978|ref|ZP_04745579.1| putative sensor histidine kinase [Roseburia intestinalis L1-82]
 gi|257200849|gb|EEU99133.1| putative sensor histidine kinase [Roseburia intestinalis L1-82]
 gi|291535246|emb|CBL08358.1| Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine
           kinase./HAMP domain [Roseburia intestinalis M50/1]
          Length = 485

 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 28/64 (43%), Gaps = 3/64 (4%)

Query: 128 KNVDYVYYLVGMSY--AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           +++DYV Y++ ++   A+ + D    Q+  K   +    + E   +S Y K     +   
Sbjct: 61  EDIDYVMYIIVVNSERAEELVDTQKPQKMIKEAREVFGELAED-ADSAYAKQRLSRILKS 119

Query: 186 RNQL 189
            + L
Sbjct: 120 LDTL 123


>gi|256394576|ref|YP_003116140.1| hypothetical protein Caci_5440 [Catenulispora acidiphila DSM 44928]
 gi|256360802|gb|ACU74299.1| TPR repeat-containing protein [Catenulispora acidiphila DSM 44928]
          Length = 148

 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 39/100 (39%), Gaps = 6/100 (6%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           D    +        + Y + V  L+  + + A +   + ++  P +    ++    A   
Sbjct: 9   DAEDGTGEPTGEAADWYRQGVQLLEAGDPAAAAQLLTKVAQKTPDSAPVLEA---LARAH 65

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
           +  G Y++A    E +      S + DY  +  G++ A++
Sbjct: 66  FDGGLYERAV---ESFAQLAHVSPDDDYAQFGWGLAAAKL 102


>gi|228942153|ref|ZP_04104693.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
          thuringiensis serovar berliner ATCC 10792]
 gi|228975082|ref|ZP_04135641.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
          thuringiensis serovar thuringiensis str. T01001]
 gi|228981722|ref|ZP_04142017.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
          thuringiensis Bt407]
 gi|228777834|gb|EEM26106.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
          thuringiensis Bt407]
 gi|228784603|gb|EEM32623.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
          thuringiensis serovar thuringiensis str. T01001]
 gi|228817487|gb|EEM63572.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
          thuringiensis serovar berliner ATCC 10792]
          Length = 273

 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 24/66 (36%)

Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
           +Q+ K  LT   S ++  L     +   +  L          E+ EKA   L+++    
Sbjct: 1  MFQMKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAEILEKAKPLLEKKGIEL 60

Query: 76 AYEYFN 81
            + F 
Sbjct: 61 EIKKFQ 66


>gi|226944845|ref|YP_002799918.1| glycosyl transferase [Azotobacter vinelandii DJ]
 gi|226719772|gb|ACO78943.1| glycosyl transferase,TPR repeat protein [Azotobacter vinelandii DJ]
          Length = 1221

 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 75/199 (37%), Gaps = 42/199 (21%)

Query: 65  VLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLGEEY 120
           +  ++++N+ +A E     +  +P + +A K    +LL        + + QQA  +    
Sbjct: 1   MQLVQKRNYPEAAELAAVLTERYPDSPLAWKVWGLALLE-------SRRPQQAIEVLHRA 53

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
               PE  +     + +G++Y +        Q   +    Y+ + +E   +      A+ 
Sbjct: 54  DGIDPEDPDT---LHNLGIAYLK--------QGNIQKADHYLGQALEVLPSF-----AKA 97

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
            + + + ++              G+Y AA+   Q+ +A    A    + ++    A   L
Sbjct: 98  RLVLAKMRI------------DTGQYQAALE--QIAIAEEKGANEN-QCLSLKAFALNKL 142

Query: 241 ALMDEAREVVSLIQERYPQ 259
               E  +V   I+ RYP 
Sbjct: 143 HRHTETLQVQEEIRRRYPD 161


>gi|222056118|ref|YP_002538480.1| hypothetical protein [Geobacter sp. FRC-32]
 gi|221565407|gb|ACM21379.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. FRC-32]
          Length = 573

 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 62/194 (31%), Gaps = 38/194 (19%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++  + L L E +   A       +   P A    K+    A +     +YQ A    E+
Sbjct: 49  IFSLSRLHLLEGDLDGALSLLQAAAEADPQAAYIHKAE---AQIYLQMNRYQDALQACEK 105

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            I              L G     + RD        K  + Y  + +E          A+
Sbjct: 106 AIKL---DPEFAEAQILAGNILVALQRD--------KDAIPYYKKAIELEP-------AK 147

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM--ARLVEAY 237
             + +         + I   YLK  EY  A+   + ++    D+     A+    L + Y
Sbjct: 148 EDIYL--------HLAIA--YLKTFEYEGAVNTLKALIKVSPDS-----ALGYYYLGKTY 192

Query: 238 VALALMDEAREVVS 251
             + L +EA +   
Sbjct: 193 DQMKLSNEAIKYYK 206



 Score = 36.2 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 40/200 (20%), Positives = 76/200 (38%), Gaps = 35/200 (17%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D    +  Y  A  + + ++F  A E F +       +     ++   A++    G+  +
Sbjct: 314 DPEAYQVRYYLASTYEEMEDFETAIEEFKKIPTS---STYYYDAVGHLAYLYKEMGQEAK 370

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
              L +E I + P    ++    L G+ Y  M R V          LQ +S I +R+ + 
Sbjct: 371 GIQLLKESIAEQPT--KIELYLNLAGL-YESMDRFVD--------GLQVLSEIDDRFPSD 419

Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
           P +    F + V  +++  K+              A+I R + VL       +  +A+  
Sbjct: 420 PRL---NFRMGVLYDKIGNKD--------------ASIARMKKVL---QLTPNDVQALNY 459

Query: 233 LVEAYVALALM-DEAREVVS 251
           L   Y  L +  DEA + + 
Sbjct: 460 LGYTYAELGVNLDEALQYLK 479


>gi|254409909|ref|ZP_05023689.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC
           7420]
 gi|196182945|gb|EDX77929.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC
           7420]
          Length = 956

 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 49/153 (32%), Gaps = 27/153 (17%)

Query: 105 YSAGKYQQAASLGEEYITQYP-----ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
           Y+ GKY +A  L E  +  Y      +  ++ Y    +G+ Y    R    +    +  L
Sbjct: 68  YNQGKYNEAIPLAERMLRLYQSVYGEDHLDITYSLNYLGILYRNQGRYTEAEP-LYRQAL 126

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
           +   R++      P+V  +   +                 Y  +G Y  A P ++  L  
Sbjct: 127 EMKKRLLGE--EHPHVATSLNNLAYL--------------YESQGRYTEAEPLYRQALEM 170

Query: 220 YSDA-----EHAEEAMARLVEAYVALALMDEAR 247
           Y             ++  L   Y +     EA 
Sbjct: 171 YKRLLGEEHPLVATSLNNLAYLYESQGRYTEAE 203


>gi|172037164|ref|YP_001803665.1| hypothetical protein cce_2249 [Cyanothece sp. ATCC 51142]
 gi|171698618|gb|ACB51599.1| hypothetical protein cce_2249 [Cyanothece sp. ATCC 51142]
          Length = 232

 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 26/82 (31%), Gaps = 10/82 (12%)

Query: 65  VLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
                + N+  A  + +Q     P +      + L+           Y QA +   + I 
Sbjct: 50  KQEANQGNYDSAIGFLDQLIARRPHSAIDYNNRGLM-----YLKTANYDQAMTDFNQAIA 104

Query: 123 QYPESKNVDYVYYLVGMSYAQM 144
             P+   +D  Y   G  YA  
Sbjct: 105 LNPQ---LDRAYNNRGNCYAHQ 123


>gi|220915045|ref|YP_002490353.1| TPR repeat-containing protein [Methylobacterium nodulans ORS 2060]
 gi|219952796|gb|ACL63186.1| TPR repeat-containing protein [Methylobacterium nodulans ORS 2060]
          Length = 392

 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 39/126 (30%), Gaps = 26/126 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF-----VQYSAGKYQQAASL 116
            +  ++  +  + +A   +N+  R  P         L+SA+     + Y+ G Y  A + 
Sbjct: 133 NRGYIYQNKHEYDRAIADYNEAIRINP--------ELVSAYFNRGLIYYNMGNYDLAIAD 184

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT--NSPY 174
               I   P  K+    Y   G++Y                 +      +       S Y
Sbjct: 185 YGNAIRIEPNHKS---AYNNRGLAYFGK--------GEYDRAISDYDEAIRIDPSYTSAY 233

Query: 175 VKGARF 180
           +  A  
Sbjct: 234 INRANL 239


>gi|330445565|ref|ZP_08309217.1| mechanosensitive ion channel family protein [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328489756|dbj|GAA03714.1| mechanosensitive ion channel family protein [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 1087

 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 28/64 (43%), Gaps = 5/64 (7%)

Query: 50  SVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
              +   Q   Y+ A   L++ ++F++A   + + +  +P    A K  +      +SA 
Sbjct: 42  KTPETVKQLAAYQAAQNQLEKIKDFNQATRRYEELTETYPEQKSAIKEQID----NFSAT 97

Query: 109 KYQQ 112
           ++ +
Sbjct: 98  EFPE 101


>gi|323966049|gb|EGB61489.1| cellulose synthase operon protein C [Escherichia coli M863]
 gi|327251176|gb|EGE62869.1| cellulose synthase operon protein C [Escherichia coli STEC_7v]
          Length = 1157

 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 62/210 (29%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 356 QQGDAALKANNPDRAERLFQQARSVDNTDSYAVLGLGDVAMA---RKDYSAAERYYQQTL 412

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +         K+G++   AA+ R +L L     +        RL +    
Sbjct: 459 LQ--NDRLAQQ----AEALEKQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + ++ P      Y   L
Sbjct: 508 AGQRSQADTLMRNLVQQKPNDPEQVYAYGL 537


>gi|323944499|gb|EGB40571.1| cellulose synthase operon protein C [Escherichia coli H120]
          Length = 1157

 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 77/237 (32%), Gaps = 38/237 (16%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQY-PESKNVDYVY--YLVG-------MSYAQMIRDV 148
             +   + AG+  QA       + Q+ P      Y Y  YL G       +++   I  +
Sbjct: 500 RLSQDLWQAGQRSQA-DTLMRNLAQHKPNDPEQVYAYGLYLSGHDQDRAALAH---INSL 555

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEI 196
           P  Q         +  +V R   S  V      +   G+   A             ++ +
Sbjct: 556 PRAQWN-----SNIQELVNRL-QSDQVMETANRLRESGKEAEAEAMLRQQPPSTRIDLTL 609

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
             +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 610 ADWAQQRRDYTAARAAYQNVLTLEPT---NADAILGLTEVDIAAGDTAAARSQLAKL 663



 Score = 35.9 bits (82), Expect = 5.5,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 60/210 (28%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + +  P      Y   L
Sbjct: 508 AGQRSQADTLMRNLAQHKPNDPEQVYAYGL 537


>gi|302679176|ref|XP_003029270.1| hypothetical protein SCHCODRAFT_236477 [Schizophyllum commune H4-8]
 gi|300102960|gb|EFI94367.1| hypothetical protein SCHCODRAFT_236477 [Schizophyllum commune H4-8]
          Length = 613

 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 4/54 (7%), Positives = 18/54 (33%), Gaps = 3/54 (5%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
           ++ +     +  ++++A +++      +          L  A        + +A
Sbjct: 377 LFTQGNAAFRRGDYAQAVKHYEAA---YQTEPELPHYQLNIAAAHLKLSNWIEA 427


>gi|257468916|ref|ZP_05633010.1| Tetratricopeptide TPR_2 repeat protein [Fusobacterium ulcerans ATCC
           49185]
 gi|317063164|ref|ZP_07927649.1| predicted protein [Fusobacterium ulcerans ATCC 49185]
 gi|313688840|gb|EFS25675.1| predicted protein [Fusobacterium ulcerans ATCC 49185]
          Length = 192

 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 51/131 (38%), Gaps = 18/131 (13%)

Query: 70  EQNFSKAYEYFNQCSRDFPFA-GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           +++++ A + + +     P     A        ++ Y    Y+ A     + +   P++ 
Sbjct: 51  KRDYNGAIKLYEKIVNTNPENADYAAF----LGYLYYENENYENAIDYFNKSLEIAPDNS 106

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ--YMSRIVERYTNSPYVKGARFYVTVGR 186
              + ++L+G +Y++            K  +     +  ++    + ++  A+ Y  +G+
Sbjct: 107 ---FAHFLLGNTYSRA--------GLIKEAINSYDFAIFLDLDIYTAHLDFAKKYEAIGQ 155

Query: 187 NQLAAKEVEIG 197
            Q A KE  I 
Sbjct: 156 KQRALKEYIIA 166


>gi|303315243|ref|XP_003067629.1| tetratricopeptide repeat containing protein [Coccidioides posadasii
           C735 delta SOWgp]
 gi|240107299|gb|EER25484.1| tetratricopeptide repeat containing protein [Coccidioides posadasii
           C735 delta SOWgp]
          Length = 854

 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 47/145 (32%), Gaps = 22/145 (15%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSA 107
             D    +  Y     ++ +  + KAYE + Q        P              + Y  
Sbjct: 297 AADTNDAQSWYLLGRCYMSQAKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQI 350

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +Y+ A       I   P    +  V+Y +G +  +   +   D       L   SR  E
Sbjct: 351 NQYRDALDAYSRAIRLNP---YISEVWYDLG-TLYESCNNQIAD------ALDAYSRAAE 400

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAK 192
              N+ ++   +  + + ++  AA 
Sbjct: 401 LDPNNVHI---KARLQLLQSGQAAN 422


>gi|222056617|ref|YP_002538979.1| hypothetical protein [Geobacter sp. FRC-32]
 gi|221565906|gb|ACM21878.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. FRC-32]
          Length = 228

 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 21/166 (12%), Positives = 49/166 (29%), Gaps = 51/166 (30%)

Query: 60  VYEKAVL-----FLKEQNFSKAYEYFNQC-SRDFPFAGVARK--SLLMSAFVQYSAGKYQ 111
           +Y +A       +L+ + +  A           F       +  + +      +  G +Q
Sbjct: 75  LYSEARNNLAVNYLEMKRWDDAITQLKLVAEDIF----YQNQDTAAVNLGLAYFGKGDHQ 130

Query: 112 QAASLGEEYITQYPES--------------KNVDY-----------------VYYLVGMS 140
           QA ++    ++ YP                  VD+                  +Y + ++
Sbjct: 131 QALAVYRSAVSSYPRDARVRLNLGRVYFALDKVDWAIAEYGKALELSGNYANAHYFLALA 190

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
           Y +         +  K        ++    +S   + AR YV + +
Sbjct: 191 YMKT--------KDNKAAAAAFREVIRIAPDSEIGQFAREYVDMLK 228


>gi|218289603|ref|ZP_03493823.1| transcriptional regulator, XRE family [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218240253|gb|EED07436.1| transcriptional regulator, XRE family [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 436

 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 25/73 (34%), Gaps = 8/73 (10%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS----RDFPFAGVARKSLLMSAFVQY 105
            +     +   Y +A    ++ ++ +A  +F   S      F     A            
Sbjct: 64  ELAGSSEEAHTYRRAKQLAEQGHYEEAIRHFLSLSWPLHTQFR----AELVFQDMGDCYL 119

Query: 106 SAGKYQQAASLGE 118
            AG Y+QAA L +
Sbjct: 120 KAGDYEQAARLYD 132


>gi|187251528|ref|YP_001876010.1| Tetratricopeptide domain-containing protein [Elusimicrobium minutum
           Pei191]
 gi|186971688|gb|ACC98673.1| Tetratricopeptide TPR_2 repeat protein [Elusimicrobium minutum
           Pei191]
          Length = 209

 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 30/78 (38%), Gaps = 2/78 (2%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D      VY     + K +++  + + +   S  +    + + S        + +GK ++
Sbjct: 52  DGSAAEPVYNMGAAYYKLKDYENSVKMYES-SAKYE-GWLKQNSYFNLGNAYFRSGKQEE 109

Query: 113 AASLGEEYITQYPESKNV 130
           A +  ++ I   P+ K  
Sbjct: 110 AKAAYKQAILINPQDKEA 127


>gi|108759978|ref|YP_629017.1| hypothetical protein MXAN_0751 [Myxococcus xanthus DK 1622]
 gi|108463858|gb|ABF89043.1| conserved domain protein [Myxococcus xanthus DK 1622]
          Length = 726

 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 19/162 (11%), Positives = 46/162 (28%), Gaps = 21/162 (12%)

Query: 20  YKFALTIFFSIAVC-----FLVGWERQSSRDVYLDSVT--------DVRYQREVYEKAVL 66
               + +   +  C        G +            T        D      + + +  
Sbjct: 14  RSLVIALALLLTACPRSTRTPSGGDTGGDLPSGDPFPTRPSVEAKKDPTADAALAQASQT 73

Query: 67  FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
                +  KA E +    + +P     + +L  +  + + +  +  A     E + + P 
Sbjct: 74  ARATPDKKKAAEAYLSVRKAYPATTAGQDALYQAGVLFFESKDFVNARKSFNELLFENPL 133

Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
               D   + + +S  +          A +   Q +S + ER
Sbjct: 134 HSRADDAKHKLAVSAME--------VGAYRDAYQTLSSLAER 167


>gi|66816601|ref|XP_642310.1| RNA polymerase II complex component [Dictyostelium discoideum AX4]
 gi|60470113|gb|EAL68093.1| RNA polymerase II complex component [Dictyostelium discoideum AX4]
          Length = 1106

 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 73/212 (34%), Gaps = 26/212 (12%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
           ++ ++ +A E+  +     P      A    L      Y    Y  A    E+ IT+ P+
Sbjct: 575 QQGDYYEAGEWIREVLDIQPDNQEAWALYGNLHL----YKEEWYP-AQKNFEQ-ITENPD 628

Query: 127 SKNVDYVYYLVGMSYAQM-IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           +KN  Y    +G  Y      +    ++      Q+ +R++ +   + Y       +   
Sbjct: 629 NKNETYASLSLGNIYYNAKFSNPDKVEKYILNAEQFYNRVLTKNPTNIYAANGIGMIIAE 688

Query: 186 RNQL--AA------KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           +  L  A       +E         V +   Y+ +G +  AI  ++  L   +  +  E 
Sbjct: 689 KGNLNLAGETFLQIREASMDCIPVSVNLAHIYVSKGLFDNAIKLYEGCLKKSTSPKEIET 748

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            +  L + Y       ++++ +      YP  
Sbjct: 749 IIMYLAKVYFDANRFYDSKQTLKKAIHMYPHN 780


>gi|332232577|ref|XP_003265482.1| PREDICTED: transmembrane and TPR repeat-containing protein 1-like
           [Nomascus leucogenys]
          Length = 898

 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 52/155 (33%), Gaps = 30/155 (19%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP-YDQRAT 155
           LL + +       + +A    ++ +   P+   V        +S     +     +Q   
Sbjct: 772 LLSAIYS--KQENHDKALDAIDKALQLKPKDPKV--------ISELFFTKGNQLREQNLL 821

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVG-RNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
               +     V+   +      A+ ++ +G    +             +G+YV+A   ++
Sbjct: 822 DKAFESYRVAVQLNPD-----QAQAWMNMGGIQHI-------------KGKYVSARAYYE 863

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
             L    D++  +E +A+L      L  + E  + 
Sbjct: 864 RALQLVPDSKLLKENLAKLDRLEKRLQEVREKDQT 898


>gi|327537564|gb|EGF24281.1| O-linked GlcNAc transferase [Rhodopirellula baltica WH47]
          Length = 486

 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 10/81 (12%), Positives = 26/81 (32%), Gaps = 11/81 (13%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
             G+ + A +     +  + +  +V          +  + R +  D   +     +  R 
Sbjct: 410 ETGQPELAVAAYRGALALHDDYPDV----------HYNLARILE-DLHRSVEAEHHWRRF 458

Query: 166 VERYTNSPYVKGARFYVTVGR 186
           ++    SP+   A   +   R
Sbjct: 459 LQLSPGSPWADEAHARLEELR 479


>gi|303327929|ref|ZP_07358368.1| translation initiation factor IF-2 [Desulfovibrio sp. 3_1_syn3]
 gi|302861755|gb|EFL84690.1| translation initiation factor IF-2 [Desulfovibrio sp. 3_1_syn3]
          Length = 447

 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 50/129 (38%), Gaps = 27/129 (20%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           G+Y++A  L    + + P++  ++Y     G++ A          R     L    R+++
Sbjct: 48  GRYEEAYQLYMRLLREEPDNDEINY-----GLALAAART------RRYSQALLAFERLID 96

Query: 168 RYTNSPYVKGARFY--VTVGRNQL-----AAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
           RY        A+    +     +L     A +E+++ R Y    +      R   +L N 
Sbjct: 97  RYP-----ADAKLRRSLADVYLRLGDRDAARRELDLARQY----DPTLTATRIARILDNL 147

Query: 221 SDAEHAEEA 229
            +++   +A
Sbjct: 148 ENSQSRFQA 156


>gi|301761928|ref|XP_002916387.1| PREDICTED: tetratricopeptide repeat protein 16-like [Ailuropoda
           melanoleuca]
          Length = 856

 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 43/133 (32%), Gaps = 30/133 (22%)

Query: 45  DVYLDSVTDVRYQ---REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG----VARKSL 97
           D     VT +      RE Y + +  L+++++  A  +F++       +      A ++ 
Sbjct: 46  DDVKPKVTGLTVPLKVREYYHQGLQCLEKEDWEMAVLFFSR--ALHLDSQLVDFYALRAE 103

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY------VYYLVGMSYAQMIRDVPYD 151
                       +  AA       +  P  +N  Y      V YL G    + +      
Sbjct: 104 -----AYIQLCDFSSAAQNLRRAYSFQP--ENTKYLERLTLVLYLQGQCLFEQL------ 150

Query: 152 QRATKLMLQYMSR 164
             A +  L+   +
Sbjct: 151 --AFREALKVFLQ 161


>gi|262194577|ref|YP_003265786.1| hypothetical protein Hoch_1336 [Haliangium ochraceum DSM 14365]
 gi|262077924|gb|ACY13893.1| hypothetical protein Hoch_1336 [Haliangium ochraceum DSM 14365]
          Length = 627

 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 8/69 (11%), Positives = 24/69 (34%), Gaps = 4/69 (5%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           +    +      ++++    L+  +++ A + F    R       +  +LL     +   
Sbjct: 106 VAQSPNDTSAEILFQEGRALLEAGDYANACDKFEASHRL----AHSVGALLNLGDCRERL 161

Query: 108 GKYQQAASL 116
           G+   A + 
Sbjct: 162 GEIASAWAA 170


>gi|255552073|ref|XP_002517081.1| heat shock protein 70 (HSP70)-interacting protein, putative
           [Ricinus communis]
 gi|223543716|gb|EEF45244.1| heat shock protein 70 (HSP70)-interacting protein, putative
           [Ricinus communis]
          Length = 330

 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 18/126 (14%), Positives = 36/126 (28%), Gaps = 18/126 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +K   F K  N+ KA   + Q  +  P      + ++            K  +A +  E 
Sbjct: 22  DKGNEFFKAGNYLKAAALYTQAIKLDPSNPTLYSNRAA-----AFLQLVKLNKALADAEM 76

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            IT  P+ +     Y+  G    + +                    ++    S  V    
Sbjct: 77  TITLNPQWEKG---YFRKG-CVLEAMERYD-------DASAAFQTALKYNPQSSEVSRKI 125

Query: 180 FYVTVG 185
             ++  
Sbjct: 126 KRISQL 131


>gi|260823344|ref|XP_002604143.1| hypothetical protein BRAFLDRAFT_208090 [Branchiostoma floridae]
 gi|229289468|gb|EEN60154.1| hypothetical protein BRAFLDRAFT_208090 [Branchiostoma floridae]
          Length = 819

 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 38/298 (12%), Positives = 93/298 (31%), Gaps = 54/298 (18%)

Query: 2   SAVLGRAICIFEAWAYQLYKFALTIFFSIAVC-FLVGWERQSSRDVYLDSVTDVRYQREV 60
                +A+   +++  +  K A T   +++   FL     Q+ +   +    D      +
Sbjct: 429 QKDFNQAVETLKSFEKKDSKVASTAATNLSFLYFLENEIGQADKYAEVAMTADRYNPSAL 488

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
             K      +    +A E++ +  R+   +     +L          G+ + +      +
Sbjct: 489 VNKGNCVFMQGEHERAREFYQEALRND--STCTE-ALYNLGLTYKKIGRLEDSLDC---F 542

Query: 121 ITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYD-------------QRA 154
           +  +   +N   V Y +   Y              Q+I  VP D             +  
Sbjct: 543 LKLHAILRNSAQVIYQIADLYDLLEDTAQATEWFMQLIGVVPTDAFVLARLGEIYDNEGD 602

Query: 155 TKLMLQYMSRIVERYT--------------NSPYVKGAR---FYVTVGRNQLAAKEVEIG 197
                QY       +               +S + + A        V +      ++ + 
Sbjct: 603 KTQAFQYHYESFRYFPSNIEIIEWLGAYYIDSQFCEKAIHYFERAAVIQPSQVKWQLMVA 662

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
             + + G Y  A+  ++ + + + +     E +  LV     L L  EA++  + +++
Sbjct: 663 SCHRRSGNYQQALETYKEIHSKFPE---NVECLRFLVRLCNDLGLK-EAQDYATKLKK 716


>gi|171912904|ref|ZP_02928374.1| hypothetical protein VspiD_17030 [Verrucomicrobium spinosum DSM
           4136]
          Length = 262

 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 8/64 (12%), Positives = 20/64 (31%), Gaps = 3/64 (4%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           +       +  Y  A     + +F  A +   +         ++R++  +     Y  G 
Sbjct: 18  APAQEESAQARYADAKDAFDKGDFQGARKMAEKMLSQ---GQLSREAFQLLGNAHYRLGH 74

Query: 110 YQQA 113
             +A
Sbjct: 75  LGEA 78


>gi|168704732|ref|ZP_02737009.1| tetratricopeptide repeat protein [Gemmata obscuriglobus UQM 2246]
          Length = 607

 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 15/120 (12%), Positives = 37/120 (30%), Gaps = 14/120 (11%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
            +     E+ E+         +  A   + +  +  P +  A  +         + G   
Sbjct: 22  PEPDTVHELLERGAESFANGKYEDAIRDYTRAIKLDPDSAAAYSAR---GTAHQANGNDA 78

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            A S   E + + P +       Y  G++YA +           +  +  ++  +E   +
Sbjct: 79  AALSDLTEALKRDPNNATT---RYYRGLAYAHL--------GWPEKAIADLTDFIEMTPD 127


>gi|149376116|ref|ZP_01893881.1| hypothetical protein MDG893_14008 [Marinobacter algicola DG893]
 gi|149359521|gb|EDM47980.1| hypothetical protein MDG893_14008 [Marinobacter algicola DG893]
          Length = 437

 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 36/101 (35%), Gaps = 7/101 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           ++  V   ++ N  +A  +F +          +   L     V +  G  + A ++   +
Sbjct: 31  FDAGVEAFRQGNLEEARIFFERARAS---GSNSPSLLYNLGVVYFRLGDLKSAETV---F 84

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           +T   E+ +    YY +G+   +M       Q   +   Q 
Sbjct: 85  LTL-LETPHAPLAYYNLGLVNQRMGNVGDARQWFERAASQD 124


>gi|119513405|ref|ZP_01632437.1| hypothetical protein N9414_19532 [Nodularia spumigena CCY9414]
 gi|119461955|gb|EAW42960.1| hypothetical protein N9414_19532 [Nodularia spumigena CCY9414]
          Length = 172

 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 14/94 (14%), Positives = 37/94 (39%), Gaps = 9/94 (9%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYS 106
           S   +   R  Y+   L  +   + +A E   +          + +  +  +       +
Sbjct: 2   STESLEIARSRYQAGKLNFENGKYREAVENLEKASALLSRN--SRLGGEVEIWLVTAYEA 59

Query: 107 AGKYQQAASLGEEYITQYP---ESKNVDYVYYLV 137
           AG+ ++A +L ++ + ++P    SK    + Y++
Sbjct: 60  AGQTEEAIALCQQ-LQRHPFPETSKQAKDLLYIL 92


>gi|322505686|emb|CAM43285.2| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 622

 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 29/80 (36%), Gaps = 12/80 (15%)

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAE-----HAEEAMARLVEAYVALALMDEAREV 249
            IGR ++   EY AA   F    A Y   E        E++  L   Y  L  +DEA + 
Sbjct: 53  NIGRVFIDMKEYGAAENAFTEAAAIYEQVEGDKSLKYAESLELLALCYTHLKFLDEAEKA 112

Query: 250 ----VSLIQ---ERYPQGYW 262
               + + +     Y    W
Sbjct: 113 FKDSIRIFRAECYNYGSNSW 132


>gi|294624686|ref|ZP_06703355.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292601017|gb|EFF45085.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 837

 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 22/153 (14%), Positives = 44/153 (28%), Gaps = 23/153 (15%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
           +     D  T        Y        E  +  A ++F +     P   +A    +    
Sbjct: 400 NSPALPDVTTSSLDALRAYALGQQRYSEGKYVAALDFFQKAVDIDPHFALAWLGQVR--- 456

Query: 103 VQYSAGKYQQAASL---GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
             ++   Y+ A       E++ ++ P  +      Y+   S+   I D            
Sbjct: 457 AHFANVDYKNATETLRVAEQFKSRLPPRE----ALYVK--SWGVQILDPA-------QAA 503

Query: 160 QYMSRIVERYTNSPYVK-GARFYVT-VGRNQLA 190
               ++ E Y +  Y    A   +     N+ A
Sbjct: 504 DSWIQMAELYPD--YAPAQANAAMDLFVANRFA 534


>gi|255935625|ref|XP_002558839.1| Pc13g04030 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211583459|emb|CAP91472.1| Pc13g04030 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 808

 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 62/198 (31%), Gaps = 54/198 (27%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFP--------FAG--VARKSLLMSAFVQYSAGKYQQA 113
              + ++ ++++A +YF++  +  P        ++      KS +  A++ +   +    
Sbjct: 522 GRTYFEQASYTEAAKYFSRVQKLAPSRIEDMEIYSTVLWHLKSDVELAYLAHQLLE---- 577

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
               +      P+       +  +G S++       +DQ      L+   R         
Sbjct: 578 ---ADR---LSPQ------AWCAIGNSFSHQ---RDHDQ-----ALKCFKRATMLDPGFA 617

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
           Y              L   E      Y+   EY  A+  ++  +    D  H   A   L
Sbjct: 618 YAF-----------TLQGHE------YVANEEYDKALEAYRHGINA--DNRHYN-AWYGL 657

Query: 234 VEAYVALALMDEAREVVS 251
              Y  +  +D A +   
Sbjct: 658 GTVYDKMGKLDFAEQHFR 675


>gi|194700824|gb|ACF84496.1| unknown [Zea mays]
 gi|219886829|gb|ACL53789.1| unknown [Zea mays]
          Length = 361

 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 28/86 (32%), Gaps = 12/86 (13%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQA 113
              ++  KA     + +F  A E ++Q     P      A ++           G Y +A
Sbjct: 2   AASDLESKAKEAFVDDDFELATELYSQAIDAGPATADLYADRAQ-----AHIKLGNYTEA 56

Query: 114 ASLGEEYITQYP-ESKNVDYVYYLVG 138
            +   + I   P   K     YY  G
Sbjct: 57  VADANKAIELDPMMHK----AYYRKG 78


>gi|154344479|ref|XP_001568181.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
          Length = 622

 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 29/80 (36%), Gaps = 12/80 (15%)

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAE-----HAEEAMARLVEAYVALALMDEAREV 249
            IGR ++   EY AA   F    A Y   E        E++  L   Y  L  +DEA + 
Sbjct: 53  NIGRVFIDMKEYGAAENAFTEAAAIYEQVEGDKSLKYAESLELLALCYTHLKFLDEAEKA 112

Query: 250 ----VSLIQ---ERYPQGYW 262
               + + +     Y    W
Sbjct: 113 FKDSIRIFRAECYNYGSNSW 132


>gi|88801585|ref|ZP_01117113.1| aerotolerance-related exported protein [Polaribacter irgensii 23-P]
 gi|88782243|gb|EAR13420.1| aerotolerance-related exported protein [Polaribacter irgensii 23-P]
          Length = 252

 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 25/74 (33%), Gaps = 3/74 (4%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
             ++  A  F K  +F KA E + +         V+ +  L      Y   +   A    
Sbjct: 21  DSLFVSANNFYKIGSFEKAIEDYKKIEAQ---NTVSTELYLNLGNTHYKLNQVGPAIYYY 77

Query: 118 EEYITQYPESKNVD 131
           E+ +   P + +  
Sbjct: 78  EKALKLDPANNDAA 91


>gi|151946831|gb|ABS19062.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 206 [Homo sapiens]
          Length = 737

 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 38/141 (26%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198
             ++    +    K     + +               QLA              +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|297736093|emb|CBI24131.3| unnamed protein product [Vitis vinifera]
          Length = 915

 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 7/68 (10%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK--SLLMSAFVQYSAGKYQQAASLGE 118
           + +A L+++   + KA E + Q S+ FP    A K  + L         G+ +++ S+ E
Sbjct: 199 FHRASLYVELGEYQKAAESYEQISQLFPENVEAPKTGAKL-----YKKCGQVERSVSILE 253

Query: 119 EYITQYPE 126
           +YI  +P 
Sbjct: 254 DYIKDHPT 261


>gi|213619379|ref|ZP_03373205.1| hypothetical protein SentesTyp_24180 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
          Length = 307

 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 2/62 (3%)

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           A   + +GR Y+ RG+Y  A+   Q V+    D E   E +  L   Y  L    E  E 
Sbjct: 214 ARVSIMMGRVYMARGDYAKAVESLQRVIV--QDKELVSETLEMLQTCYQQLGKNAEWAEF 271

Query: 250 VS 251
           + 
Sbjct: 272 LR 273


>gi|254457399|ref|ZP_05070827.1| hypothetical protein CBGD1_1095 [Campylobacterales bacterium GD 1]
 gi|207086191|gb|EDZ63475.1| hypothetical protein CBGD1_1095 [Campylobacterales bacterium GD 1]
          Length = 791

 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 55/145 (37%), Gaps = 14/145 (9%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK-YQQAASLGEE 119
           Y K   +  E+N+ K  E  ++   ++P +    + L     V     +   +   L + 
Sbjct: 186 YLKIKRYYDEKNYEKCLELIDEVMLEYPSSLFNAELLYYKIRVNSKLEEKNDEVIELSKV 245

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
           Y+ +Y    NV  V  L+  +Y+            +     +  R+   + +SPY K   
Sbjct: 246 YLREYSADDNVAEVLSLIARAYSLS--------GISGQADYFFDRLFSEHEDSPYAKWGY 297

Query: 180 FYVTVGRNQ--LAAKEVEIGRYYLK 202
            Y      +  LA+K +    YYLK
Sbjct: 298 IYKGEMLEESGLASKAL---DYYLK 319


>gi|257062034|ref|YP_003139922.1| hypothetical protein Cyan8802_4301 [Cyanothece sp. PCC 8802]
 gi|256592200|gb|ACV03087.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8802]
          Length = 363

 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 75/248 (30%), Gaps = 38/248 (15%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE-KAVLFLKEQNFSKAYEYFNQCSRD 86
             + V  L   + Q + + Y   +       E +       ++++   KA +Y N   + 
Sbjct: 148 IGLGVVLLRQNDYQGAAEAYKRVIALDPNNSEAFAIMGSSLIQQKELDKAIQYLNNAVKR 207

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
           FP   +  + LL +AF+       + A +  +      P +  V              I 
Sbjct: 208 FP-NDLELRLLLATAFL--EQDNNELAFNQLKSAERISPGNPKV-----------QLKIG 253

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
            +   Q      L+   RI     +S   +     + +                    +Y
Sbjct: 254 RILEQQNKLDDALKTYQRITYLSPSSTEARAGVGRIQLA-----------------TKDY 296

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP---QGYWA 263
           + A+  ++ + +   +          L  AY       EA + +   ++ Y         
Sbjct: 297 LGAVITYRELASMLPETPEPY---YYLGLAYKERGRKKEATKALEQARQLYQKQDNNKGI 353

Query: 264 RYVETLVK 271
             V+ L+K
Sbjct: 354 EEVDKLLK 361



 Score = 36.2 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 35/244 (14%), Positives = 83/244 (34%), Gaps = 52/244 (21%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            +   +    L    +     +     TD    +E+      ++  ++++ A   + +  
Sbjct: 10  LVSVFVMGLTLPANAQLQPPLILAQQSTDSEELKELLRLGREYVDLKDYNSAIVTYEKA- 68

Query: 85  RDFPFAGVARKSLLM---------SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
                      ++L            ++    G ++QA    ++ +T  P + +    YY
Sbjct: 69  -----------AILDGNNAKIFSGIGYLYAQKGNFRQAVKAYQQAVTLDPNNADF---YY 114

Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
            +G S A  I D      A    +Q   R+ + Y                        + 
Sbjct: 115 ALGFSLAN-IGDNENAASAYYYAIQLAPRVTKNY------------------------IG 149

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           +G   L++ +Y  A   ++ V+A   +     EA A +  + +    +D+A + ++   +
Sbjct: 150 LGVVLLRQNDYQGAAEAYKRVIALDPNNS---EAFAIMGSSLIQQKELDKAIQYLNNAVK 206

Query: 256 RYPQ 259
           R+P 
Sbjct: 207 RFPN 210


>gi|254410083|ref|ZP_05023863.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC
           7420]
 gi|196183119|gb|EDX78103.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC
           7420]
          Length = 955

 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 49/153 (32%), Gaps = 27/153 (17%)

Query: 105 YSAGKYQQAASLGEEYITQYP-----ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
           Y+ GKY +A  L E  +  Y      +  ++ Y    +G+ Y    R    +    +  L
Sbjct: 67  YNQGKYNEAIPLAERMLRLYQSVYGEDHLDITYSLNYLGILYRNQGRYTEAEP-LYRQAL 125

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
           +   R++      P+V  +   +                 Y  +G Y  A P ++  L  
Sbjct: 126 EMKKRLLGE--EHPHVATSLNNLAYL--------------YESQGRYTEAEPLYRQALEM 169

Query: 220 YSDA-----EHAEEAMARLVEAYVALALMDEAR 247
           Y             ++  L   Y +     EA 
Sbjct: 170 YKRLLGEEHPLVATSLNNLAYLYESQGRYTEAE 202


>gi|124006676|ref|ZP_01691508.1| tetratricopeptide repeat family [Microscilla marina ATCC 23134]
 gi|123987831|gb|EAY27522.1| tetratricopeptide repeat family [Microscilla marina ATCC 23134]
          Length = 249

 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 10/63 (15%)

Query: 59  EVYEKAVLFLKE-QNFSKAYEYFNQ--CSRDF-PFAGVARKSLLMSAFVQYSAGKYQQAA 114
           E+++KA    ++  N+ KA E   +     D  P+           AF       Y+QA 
Sbjct: 44  ELHQKARQEGQQYGNYDKAIELLKKTCLMADHWPYPVY------DLAFTYLLQKNYEQAL 97

Query: 115 SLG 117
              
Sbjct: 98  QYY 100


>gi|115741969|ref|XP_796250.2| PREDICTED: similar to Transmembrane and tetratricopeptide repeat
           containing 3 [Strongylocentrotus purpuratus]
 gi|115957090|ref|XP_001177605.1| PREDICTED: similar to Transmembrane and tetratricopeptide repeat
           containing 3 [Strongylocentrotus purpuratus]
          Length = 778

 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 46/114 (40%), Gaps = 11/114 (9%)

Query: 55  RYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
               +VY   A++F+ +++ S A  Y+ +     P +    ++L+ ++ + +   +  QA
Sbjct: 602 PPSVQVYSTLALIFMDDEDTSAALHYYQKALEIQP-SNY--QALVNTSNIHFEEERPLQA 658

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
               E  +  +P    +     L+G      ++D    Q       Q   RIV+
Sbjct: 659 KPYLETLLKHHPNHTEIAKSMLLLGEILLNSLQDEVQSQ-------QLFQRIVD 705


>gi|89890028|ref|ZP_01201539.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
 gi|89518301|gb|EAS20957.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
          Length = 596

 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 46/120 (38%), Gaps = 7/120 (5%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           + + KA L   +   S+A   ++Q  ++     +  ++LL  A +    G  + A +  +
Sbjct: 468 KAFAKADLKQYQNQRSEAISLYDQLLQNHKGDPIEDEALLNQAKLYEIEGNLEAAKNNYQ 527

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
             I  + +    D  +Y + + Y +   D+               RI+  Y +S +   A
Sbjct: 528 TIIDNFADGILADDAFYKLALLYEEKFNDLS-------KAQALYERIIYDYADSIHFVDA 580


>gi|17563052|ref|NP_503322.1| hypothetical protein R09E12.3 [Caenorhabditis elegans]
 gi|10864459|gb|AAG24172.1| C. elegans STI-1 protein, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 320

 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 22/166 (13%), Positives = 43/166 (25%), Gaps = 39/166 (23%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPES---------------------------- 127
           +        Y    +++A    ++ I   P +                            
Sbjct: 7   AEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAV 66

Query: 128 -----KNVDYVYYLVGMSY----AQMIRDVPYDQRATKLMLQYMS--RIVERYTNSPYVK 176
                   DY      MS      Q   D+    +     L       +V++        
Sbjct: 67  EVGRETRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRDPELVKKVKELEKQL 126

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
            A   +     +LA +E   G  Y K+G+Y  A+  +   +    +
Sbjct: 127 KAAERLAYINPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPE 172


>gi|71735889|ref|YP_273576.1| type IV pilus biogenesis protein PilF [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71556442|gb|AAZ35653.1| type IV pilus biogenesis protein PilF [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|320322923|gb|EFW79013.1| type IV pilus biogenesis protein PilF [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320329954|gb|EFW85942.1| type IV pilus biogenesis protein PilF [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330874706|gb|EGH08855.1| type IV pilus biogenesis/stability protein PilW [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 252

 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 24/63 (38%), Gaps = 9/63 (14%)

Query: 64  AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
            +  LK  N  +A E+F +     R  P      +SLL  A + Y   +Y  A    + +
Sbjct: 148 GMTSLKLGNREQAREHFTKALRLDRQLP------RSLLEMAQISYEDKQYVPARDYYDRF 201

Query: 121 ITQ 123
              
Sbjct: 202 SQL 204


>gi|148264628|ref|YP_001231334.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4]
 gi|146398128|gb|ABQ26761.1| Tetratricopeptide TPR_2 repeat protein [Geobacter uraniireducens
           Rf4]
          Length = 729

 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 69/225 (30%), Gaps = 37/225 (16%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           K  + L + +   A   F     + P +    +  L  A       +        +  + 
Sbjct: 379 KGSIALLKNDGVNAVAEFRTVVAEQPQS---IQGYLRLAEAHALNREMNLMNDTLQNALK 435

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK-GARFY 181
             PES +V        M+ +  +      Q+  +   + + ++V +Y      +      
Sbjct: 436 VDPESSDV-----QRAMARSYAM------QKDFRKAEEQLRKLVRKYPGDMEARSDLGDV 484

Query: 182 VTVGRNQ-LAAKEVE---------------IGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
               R+   A  E                 +G  Y+  G++       +  L     A  
Sbjct: 485 FVAARDFGRAESEYADLKRKVPQIPLAYVKLGELYMLEGKWARGAAELEKALQINPRATS 544

Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
               ++ L++AY+ L   D A   V+L+  R           TL+
Sbjct: 545 F---LSSLMQAYLRLNKGDAA---VALLDARIRSNPKDAVAYTLL 583


>gi|312281917|dbj|BAJ33824.1| unnamed protein product [Thellungiella halophila]
          Length = 358

 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 20/140 (14%), Positives = 46/140 (32%), Gaps = 23/140 (16%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAA 114
            +E+ EKA     + +F  A + +++     P   A  A ++             +  A 
Sbjct: 2   AKELAEKAKEAFLDDDFDVAVDLYSKAIDLDPNCAAFFADRAQ-----ANIKIDNFTDAV 56

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN-SP 173
           +   + I   P    +   Y   G +  ++           K  L+  + +     N S 
Sbjct: 57  ADANKAIDLEPT---LAKAYLRKGTACMKLEEYST-----AKAALEKGASVA---PNESK 105

Query: 174 YVKGARFYVTVGRNQLAAKE 193
           +    +  +     ++A +E
Sbjct: 106 F----KKMIDECNLRIAEEE 121


>gi|289577920|ref|YP_003476547.1| CRISPR-associated protein, TIGR02710 family [Thermoanaerobacter
           italicus Ab9]
 gi|289527633|gb|ADD01985.1| CRISPR-associated protein, TIGR02710 family [Thermoanaerobacter
           italicus Ab9]
          Length = 491

 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 9/63 (14%), Positives = 25/63 (39%), Gaps = 3/63 (4%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           +KA+    + +F+ AY+ F++      +       +L   +  +    + +A    E + 
Sbjct: 205 DKAIALFNKGDFASAYKIFSELEERVAYRDYTFYKMLSQIYSCWDNLSFNEAI---EGFE 261

Query: 122 TQY 124
             +
Sbjct: 262 KLF 264


>gi|253997596|ref|YP_003049660.1| peptidase M48 Ste24p [Methylotenera mobilis JLW8]
 gi|253984275|gb|ACT49133.1| peptidase M48 Ste24p [Methylotenera mobilis JLW8]
          Length = 505

 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 61/191 (31%), Gaps = 42/191 (21%)

Query: 113 AASLGEEYITQYP-ESKNVDYVYYLVGMSYAQMIRDVPYDQ------RAT----KLMLQY 161
           A      ++  +P  S+ +  V   V   + + +RD    Q      RAT    +  +  
Sbjct: 254 AEGNAPSFLRTHPLTSERIADVTNRVEQMHYKQVRDSIEFQYVKAKLRATLGGDQAAIDL 313

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQL-------AAKEVE---------------IGRY 199
             + +       Y   A  +  +    L       A KE+                  R 
Sbjct: 314 FEQNIR---EQRYANAAAEHYGLTVALLRKSAWVAADKELAWLQKNAAPHPMIASLAARL 370

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            + R +  AA  R+   L ++ D+      +    E Y+A    + A ++V   Q  YP 
Sbjct: 371 EVARDKPAAAAERYASGLRSFPDSRAL---IYGYAEHYLATRQAEPAIQLVKAKQSLYPN 427

Query: 260 GYWARYVETLV 270
                Y   L+
Sbjct: 428 ---DAYFYDLL 435


>gi|254416281|ref|ZP_05030035.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
 gi|196176963|gb|EDX71973.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
          Length = 156

 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 21/162 (12%), Positives = 55/162 (33%), Gaps = 31/162 (19%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKA----------VLFLKEQNFSKAYEYFNQCSRDFP-F 89
           ++  +      T+  ++   Y+K            + L+    ++A     Q  R+ P F
Sbjct: 14  KNPDENVRKQATEELWRIWFYQKGISGMERLGRTQMLLERGETAQAEALLTQIIREQPDF 73

Query: 90  AG-VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
           A    R+++L      Y   +YQ++    ++ I   P         + +G+ Y  +    
Sbjct: 74  AEAWNRRAVL-----YYILKQYQKSRDDCQQVIRLNPIHFG---ALHGLGLCYMAL---- 121

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
                  +  +    + ++      Y    + ++     +L+
Sbjct: 122 ----GDYQAAITAFRKALDIQP---YSLINQKFILECTARLS 156


>gi|253702403|ref|YP_003023592.1| hypothetical protein GM21_3815 [Geobacter sp. M21]
 gi|251777253|gb|ACT19834.1| TPR repeat-containing protein [Geobacter sp. M21]
          Length = 399

 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 65/203 (32%), Gaps = 22/203 (10%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
              + F +++++++A     +     P      ++    A    + GK  +A    +  +
Sbjct: 34  SSGLAFYQKKDYARATSELKRAISMDPTN---TQAYKYLAGAYQAQGKTDEAIKTYKYSL 90

Query: 122 TQYPE----SKNVDYVYYLV---GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
              P       ++  VY       ++  +       D   T         + + Y  +  
Sbjct: 91  ALDPTQASVHTSLGNVYLQQKKYNLAEREFKDAGKLDPTDTLAPY----TLGQLYVQTER 146

Query: 175 VKGARFYVTVGRNQLAAKE----VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
              A        +++A  +      +G  Y K G+Y  A+ +    +      E A    
Sbjct: 147 YGEAEAQFKKV-SRMAPTDPNPYYSLGAVYNKEGKYADAVKQLTQAVKLRPKMEAAH--- 202

Query: 231 ARLVEAYVALALMDEAREVVSLI 253
             L  AY AL     A++ V  +
Sbjct: 203 FELGVAYAALGDTTNAQKEVDTL 225


>gi|115380067|ref|ZP_01467110.1| soluble lytic murein transglycosylase [Stigmatella aurantiaca
           DW4/3-1]
 gi|310822008|ref|YP_003954366.1| transglycosylase slt domain-containing protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|115362926|gb|EAU62118.1| soluble lytic murein transglycosylase [Stigmatella aurantiaca
           DW4/3-1]
 gi|309395080|gb|ADO72539.1| Transglycosylase SLT domain protein [Stigmatella aurantiaca
           DW4/3-1]
          Length = 783

 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 39/127 (30%), Gaps = 13/127 (10%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
                KE+   +A +     ++      V  ++L +  + Q S    + A S        
Sbjct: 308 GRALRKERKHRQAIQVLTPVAQQCDSPEVRPQALYVLGYSQ-SVVDPETAISTYATLARD 366

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK--LMLQYMSRIVERYTNSPYVKGARFY 181
           YPE    D   +           +   +QR  +  + L +   +  RY    +   A F 
Sbjct: 367 YPEHGYADDALF----------FEAWLEQRTFQPEVALAHYEEVARRYPAGNFASEALFR 416

Query: 182 VTVGRNQ 188
                 +
Sbjct: 417 AFWLHQR 423


>gi|89889366|ref|ZP_01200877.1| hypothetical protein BBFL7_01177 [Flavobacteria bacterium BBFL7]
 gi|89517639|gb|EAS20295.1| hypothetical protein BBFL7_01177 [Flavobacteria bacterium BBFL7]
          Length = 379

 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 24/61 (39%), Gaps = 3/61 (4%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A  ++  + + KA   F +           R      AF  YS  +Y+++    + Y+ +
Sbjct: 190 AQAYMNSKWYDKAIPVFERLFELGNDTEYNRNG---LAFSYYSTRQYEKSIENYKVYVEE 246

Query: 124 Y 124
           Y
Sbjct: 247 Y 247


>gi|52549471|gb|AAU83320.1| O-linked GlcNAc transferase [uncultured archaeon GZfos27E6]
          Length = 246

 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 11/69 (15%), Positives = 25/69 (36%), Gaps = 3/69 (4%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            +      ++ + +A   FN+  R  P   +A           Y   +Y++A    +E +
Sbjct: 167 NEGEGLFVQKKYDEAIRCFNEAIRLNPSYELAWN---NKGTALYMLKRYKEAIKCFDEVL 223

Query: 122 TQYPESKNV 130
              P ++  
Sbjct: 224 KINPNNETA 232


>gi|148263817|ref|YP_001230523.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4]
 gi|146397317|gb|ABQ25950.1| Tetratricopeptide TPR_2 repeat protein [Geobacter uraniireducens
           Rf4]
          Length = 207

 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 22/181 (12%), Positives = 57/181 (31%), Gaps = 21/181 (11%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
             +   I +F+     +  F  T+  ++     V    +           D     E + 
Sbjct: 8   KSVSNCIFVFKGKQMNVRLFLATLIVTLITAIAVHGAVEPKSAPREKGAVDFTGAAEWFR 67

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL-LMSAFVQYSAGKYQQAASLGEEYI 121
           K +   +  ++ +A E F +     P    A  +            G +++AA+  ++ +
Sbjct: 68  KGLELNRSGSYREAAEAFRKVIAITP----ADAAAWFNLGTASAFLGNHEEAAASLKQAV 123

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              P+   +   Y  +G  Y ++ R         +  ++   +++    +      A   
Sbjct: 124 RLNPD--FLP-AYGNLGGIYYRLGR--------FQEAIEAYGQVLRLKPD-----DANAR 167

Query: 182 V 182
            
Sbjct: 168 F 168


>gi|312889813|ref|ZP_07749359.1| TPR repeat-containing protein [Mucilaginibacter paludis DSM 18603]
 gi|311297739|gb|EFQ74862.1| TPR repeat-containing protein [Mucilaginibacter paludis DSM 18603]
          Length = 286

 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 36/78 (46%), Gaps = 4/78 (5%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           + +G + +K G++  A+ RF+ ++A   + E        L E+Y  L +  EA +     
Sbjct: 209 LSLGLFAMKSGQFQKAVDRFKTLVAQKPELEPY----FYLAESYKQLGMKAEAIDAYQKC 264

Query: 254 QERYPQGYWARYVETLVK 271
           +   P   + + ++  +K
Sbjct: 265 KSMMPDPVFGQRIDEYIK 282


>gi|295400941|ref|ZP_06810916.1| Tetratricopeptide repeat protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|294976943|gb|EFG52546.1| Tetratricopeptide repeat protein [Geobacillus thermoglucosidasius
           C56-YS93]
          Length = 173

 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 46/109 (42%), Gaps = 10/109 (9%)

Query: 12  FEAWAYQLYKF-ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKE 70
           F   + ++ +   L+ F  I +C   G  +  ++D    +    RY++ +Y  A   L+E
Sbjct: 9   FRNMSEKMRRLCFLSTFVLIVLCVSYGIFKGKNQDQIYKN----RYEQYIY--AQHLLQE 62

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Q  ++A     +  R +P         L  A+    AG + +A+   ++
Sbjct: 63  QKANEALPILKKLYRQYP-DRYNIMRDLGLAYA--LAGDFSKASFYYDK 108


>gi|317050283|ref|YP_004111399.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfurispirillum indicum S5]
 gi|316945367|gb|ADU64843.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfurispirillum indicum S5]
          Length = 474

 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 21/53 (39%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
           Y   ++ L+ +N++ A     +     P       +    AF  +  G+++ A
Sbjct: 70  YLAGLVDLRLENYTSAIRNLARSLEIIPEGTNPHNAKYNLAFAYWKNGQHELA 122


>gi|257487200|ref|ZP_05641241.1| type IV pilus biogenesis protein PilF [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|289649061|ref|ZP_06480404.1| type IV pilus biogenesis protein PilF [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|298486021|ref|ZP_07004095.1| Tfp pilus assembly protein PilF [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298159498|gb|EFI00545.1| Tfp pilus assembly protein PilF [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|330894492|gb|EGH27153.1| type IV pilus biogenesis/stability protein PilW [Pseudomonas
           syringae pv. mori str. 301020]
 gi|331009184|gb|EGH89240.1| type IV pilus biogenesis/stability protein PilW [Pseudomonas
           syringae pv. tabaci ATCC 11528]
          Length = 252

 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 24/63 (38%), Gaps = 9/63 (14%)

Query: 64  AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
            +  LK  N  +A E+F +     R  P      +SLL  A + Y   +Y  A    + +
Sbjct: 148 GMTSLKLGNREQAREHFTKALRLDRQLP------RSLLEMAQISYEDKQYVPARDYYDRF 201

Query: 121 ITQ 123
              
Sbjct: 202 SQL 204


>gi|158334155|ref|YP_001515327.1| TPR domain-containing protein [Acaryochloris marina MBIC11017]
 gi|158304396|gb|ABW26013.1| TPR domain protein [Acaryochloris marina MBIC11017]
          Length = 566

 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 19/150 (12%), Positives = 42/150 (28%), Gaps = 17/150 (11%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
             + A   L   E   +   +   +   R    ++ + +   +  N+ +A    N     
Sbjct: 255 ALAEAGQALGRGESSKAVSKFNQVLGSDRKAVALHGRGLAHYQRGNYKEALADLNHAIAI 314

Query: 87  FPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEE-Y---ITQYPESKNVDYVYYLVGMS 140
            P+       +  +  A         Q  AS  E  +   +   P+  N    Y   G++
Sbjct: 315 DPYNALFFNSRGSVHLAQALQPNRNLQSGASRAERDFSEALKLNPDDSN---AYNNRGLA 371

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
              M         A    +   ++ +    
Sbjct: 372 NFYM--------GARTQAIDDYNQALRLDP 393


>gi|153952946|ref|YP_001393711.1| hypothetical protein CKL_0309 [Clostridium kluyveri DSM 555]
 gi|219853603|ref|YP_002470725.1| hypothetical protein CKR_0260 [Clostridium kluyveri NBRC 12016]
 gi|146345827|gb|EDK32363.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
 gi|219567327|dbj|BAH05311.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 410

 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 40/117 (34%), Gaps = 15/117 (12%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFA---GVARKSLLMSAFVQYSAGKYQQAASLG 117
           Y     +LK ++++ A  Y  +    + F     +    + M       +G  + A    
Sbjct: 296 YNLGCNYLKNKDYNNAKTYLKK---SYEFGTGNELYPHIIYMLGTSFDLSGDLKGAIKYY 352

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
           EEY   + +    + V Y + + Y  +           +    Y  ++V  Y  S Y
Sbjct: 353 EEYDGSFSDGSYEETVLYRLAVIYKNL---------NMEQSKSYAKKLVNTYPESIY 400


>gi|119509305|ref|ZP_01628455.1| hypothetical protein N9414_15180 [Nodularia spumigena CCY9414]
 gi|119466147|gb|EAW47034.1| hypothetical protein N9414_15180 [Nodularia spumigena CCY9414]
          Length = 608

 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 61/196 (31%), Gaps = 39/196 (19%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAA 114
            + ++ + V      ++  A   F Q  +  P+     + +  +         G+YQQA 
Sbjct: 148 AKALHNRGVARCNYGDYQGAIADFQQALQWHPYFAPAYSSRGNIYQI-----LGEYQQAI 202

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
           +  +  +       N+  VY+  G                 +  L      ++ Y     
Sbjct: 203 AEHDRALQL---DPNLAEVYHNRG---------------NARYALGDNQGAIKDY----- 239

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD--AEHAEEAMAR 232
                 Y    +   A      G  Y +  ++  AI  F   L    D    ++E  + R
Sbjct: 240 -----NYALKIKPHFAEAYYNRGLVYSRLKDFPQAIADFNQALILNPDDVQAYSERGLIR 294

Query: 233 --LVEAYVALALMDEA 246
             L E Y AL    +A
Sbjct: 295 ETLGEYYQALEDYSQA 310


>gi|91093306|ref|XP_967617.1| PREDICTED: similar to AGAP009119-PA [Tribolium castaneum]
 gi|270014189|gb|EFA10637.1| hypothetical protein TcasGA2_TC016274 [Tribolium castaneum]
          Length = 376

 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 27/92 (29%), Gaps = 9/92 (9%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLL 98
                   +  +D   ++ +  +A+    E N+ KA E F +     P +    A++   
Sbjct: 96  GDPNKKVTEEESDKSDEKRM--EAMGQFSEGNYDKAIELFTEAIELNPSSALLFAKRGQ- 152

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
                     K           +   P+S   
Sbjct: 153 ----AFLKQTKPNACIKDCTRALELNPDSAAA 180


>gi|290982719|ref|XP_002674077.1| TPR domain-containing protein [Naegleria gruberi]
 gi|284087665|gb|EFC41333.1| TPR domain-containing protein [Naegleria gruberi]
          Length = 724

 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 70/199 (35%), Gaps = 42/199 (21%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE-KAVLFLKEQNFSKAYEYFNQ 82
           ++    +A C+L+  +  +S+ +   ++        VY  + +++ +E ++  A + +NQ
Sbjct: 138 VSALSGLAACYLLLGDIPASKRLIEKALKVNSEYYHVYHVRGMIYDEEGDYENAIKMYNQ 197

Query: 83  CSRDFPFAGVARKSLLMSAFVQY-SAGKY------QQAASLGEEYITQ---Y-PESKNVD 131
            S   P          M A   Y  A  Y      +QA     E I     +    +N+ 
Sbjct: 198 SSFLNP----------MYARSHYNKALSYEKLFLIEQAIDEYRECIRLDSTHISSHQNLS 247

Query: 132 YVYYLVG------------MS------YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
           Y Y  +G            +S          I D   +    +   Q ++  +     + 
Sbjct: 248 YCYLQMGEKDRAIKILHEILSKNIDANSMADISDSFREIGDDEKACQVLTSAISLDPTNA 307

Query: 174 --YVKGARFYVTVGRNQLA 190
             Y++ A  Y  + +  LA
Sbjct: 308 EIYIRRADLYKHMEKKSLA 326


>gi|224535852|ref|ZP_03676391.1| hypothetical protein BACCELL_00716 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224522575|gb|EEF91680.1| hypothetical protein BACCELL_00716 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 317

 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 35/99 (35%), Gaps = 6/99 (6%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
           ++++ D+      D   +  +  +  +        +A   +   +   PF     ++ L 
Sbjct: 179 KEATEDIDAILSQDPDEEAALLLRGKVKEAAGQQEEAETDYRYVTELNPFN---EQAFLC 235

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
              +     KY +A +L +E I   P   N    Y+  G
Sbjct: 236 LGQLYIVQKKYPEAIALFDEAIELNP---NFAQAYHERG 271


>gi|217979016|ref|YP_002363163.1| peptidase C14 caspase catalytic subunit p20 [Methylocella
           silvestris BL2]
 gi|217504392|gb|ACK51801.1| peptidase C14 caspase catalytic subunit p20 [Methylocella
           silvestris BL2]
          Length = 1155

 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 10/75 (13%)

Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA------KEV 194
           Y      V +++         +   VER+ +S Y   AR+ +      +A       KE 
Sbjct: 261 YLNQTDRVAWEKVKETDDPAALHDFVERFPSSFYAIEARYRLKALERAIAEQKARALKEA 320

Query: 195 EIGRYYLKRGEYVAA 209
           E+ R    R + VAA
Sbjct: 321 ELAR----REKEVAA 331


>gi|197120079|ref|YP_002140506.1| glycosyltransferase [Geobacter bemidjiensis Bem]
 gi|197089439|gb|ACH40710.1| glycosyltransferase, TPR domain-containing protein [Geobacter
           bemidjiensis Bem]
          Length = 616

 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 37/93 (39%), Gaps = 7/93 (7%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
              D     + Y+++   + + +   A++   Q    +P    A  +    A + Y  G 
Sbjct: 457 PEEDDLCAEDRYQRSQELVSQGDLDGAFQELKQILSSYP--DFAP-AHNDLAVLAYQQGD 513

Query: 110 YQQAASLGEEYITQYPES----KNVDYVYYLVG 138
            +QA +  E+     PE+    KN+   Y++ G
Sbjct: 514 KEQARAHYEKAAELAPENGTFQKNLADFYFVEG 546


>gi|153821328|ref|ZP_01973995.1| GGDEF family protein [Vibrio cholerae B33]
 gi|126521146|gb|EAZ78369.1| GGDEF family protein [Vibrio cholerae B33]
          Length = 667

 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 72/212 (33%), Gaps = 32/212 (15%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQ-CSRDFPFAG--VARKSLLMS 100
           D+ L  + D      +Y    L +     +  A +Y N+            +  +     
Sbjct: 215 DLLLCLLPDYVDPSGIYNDVGLLMGTLGQYESALDYLNKALEYRLEQGNPLLIAQVEHSL 274

Query: 101 AFVQYSAGKYQQAASLGEEYITQY--PES--KNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
               +  G+Y+++    E+    +  P +    + YV+  +G +Y ++   V  DQ    
Sbjct: 275 GDTYFKQGRYEESILYFEQ-AKAHLTPANYLFGLAYVHLGLGKAYIELNNFVEGDQ-HLF 332

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             L+Y++          +       +      LA        +  K  +Y  AI      
Sbjct: 333 QALEYVN---------QHKDQHLQGLIYL--SLAQ-----AHF--KEQKYAQAIDYANQA 374

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           +A  S++           +AY+ LA + EA +
Sbjct: 375 VA-ISESASLPR---IKAQAYLQLAKIAEAEQ 402


>gi|74004902|ref|XP_852753.1| PREDICTED: similar to F54C1.5a [Canis familiaris]
          Length = 839

 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 30/75 (40%), Gaps = 7/75 (9%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
           V D  +   VY      L++  +++A +      +  P +  A  SLL   +  Y   ++
Sbjct: 183 VPDGEFTAVVY----RLLRDARYAEAVQLLGAELQRSPRSR-AGLSLL--GYCYYRLQEF 235

Query: 111 QQAASLGEEYITQYP 125
             AA   E+    +P
Sbjct: 236 ALAAECYEQLGQLHP 250


>gi|70730204|ref|YP_259943.1| TPR domain-containing protein [Pseudomonas fluorescens Pf-5]
 gi|68344503|gb|AAY92109.1| TPR domain protein [Pseudomonas fluorescens Pf-5]
          Length = 785

 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 11/78 (14%), Positives = 24/78 (30%), Gaps = 3/78 (3%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           + +  +  Y  AV          A        +  P     R + L        +G+  +
Sbjct: 710 EPQNPQYAYVLAVALHDSGQQDAANRQLQALLQRQPT---QRNARLSLIQYYLESGQEPK 766

Query: 113 AASLGEEYITQYPESKNV 130
           A +L +++    P    +
Sbjct: 767 AQALMQQWKQLNPGDPAL 784


>gi|113474024|ref|YP_720085.1| glycosyl transferase family protein [Trichodesmium erythraeum
           IMS101]
 gi|110165072|gb|ABG49612.1| glycosyl transferase, family 2 [Trichodesmium erythraeum IMS101]
          Length = 892

 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 14/104 (13%), Positives = 33/104 (31%), Gaps = 14/104 (13%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              +  E  + +A  Y+ + +   P      +              +Q A +     I  
Sbjct: 11  GKNYSDEGKWEEAIFYYKKLTELQP-NNW--EVYQNLGNALLEIESWQDAVTAYRHAIQL 67

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            P   N+D+ +Y +G +  ++           +  +    R +E
Sbjct: 68  NP---NLDFSHYQLGEALIKL--------EQWQEAIAAYQRALE 100


>gi|291414309|ref|XP_002723403.1| PREDICTED: tetratricopeptide repeat domain 38-like [Oryctolagus
           cuniculus]
          Length = 427

 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 63/219 (28%), Gaps = 57/219 (26%)

Query: 31  AVCFLVGWERQSSRDVYLD----------SVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           A   L+G       D  LD              +  + +++  AV      NF KA   +
Sbjct: 72  AGLRLIGTGSSRQLDKELDLAVKTMVDVSKAQALTQREQLHVSAVETFANGNFPKACALW 131

Query: 81  NQCSRDFPFAGVARKSLLMSA-----FVQYSAGKYQQAASLGEEYITQYPE-SKNVDYVY 134
            Q  +D P          M A        +  G   Q           YP  S +V    
Sbjct: 132 EQILQDHPTD--------MLALKFSHDAYFYLGYQDQMRDSVAR---IYPFWSPDVPLSS 180

Query: 135 YLVGMSYAQMIRDVPYDQ--RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR------ 186
           Y+ G+    ++    YD+  +  K  L              +      +V   R      
Sbjct: 181 YVKGIYSFGLMETNFYDRAEKLAKEALSIT-------PTDAWSVHTIAHVHEMRAEVQQG 233

Query: 187 --------------NQLAAKEV-EIGRYYLKRGEYVAAI 210
                         + LA+        + +++G+Y AA+
Sbjct: 234 LEFMQHSETHWKDSDMLASHNYWHWALFLIEKGDYEAAL 272


>gi|262194272|ref|YP_003265481.1| hypothetical protein Hoch_0987 [Haliangium ochraceum DSM 14365]
 gi|262077619|gb|ACY13588.1| Tetratricopeptide TPR_2 repeat protein [Haliangium ochraceum DSM
           14365]
          Length = 305

 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 32/98 (32%), Gaps = 6/98 (6%)

Query: 30  IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK-AYEYFNQCSRDFP 88
           +   FLV      +    L    D    R+ +  A    +  ++++ A EY       + 
Sbjct: 3   LRAAFLVLCFLALNSSPILAQAQDKELARKHFVLAQAHEQNGDYAQAAVEYLEA----YE 58

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
           +   + +    +       G+  +A    E Y+   P 
Sbjct: 59  YFA-SPEFFYNAGRAYELGGEAAKAVEHYERYMALDPN 95


>gi|195055231|ref|XP_001994523.1| GH17296 [Drosophila grimshawi]
 gi|193892286|gb|EDV91152.1| GH17296 [Drosophila grimshawi]
          Length = 948

 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 39/100 (39%), Gaps = 8/100 (8%)

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEI-----GRYYLKRGEYVAAIPRFQLVLANYS 221
           E +  S +    + Y    +     KE+ +        YLK  +Y  A+      L    
Sbjct: 24  EAFKASKWTDAVQEYTAAIKLGAKHKELPVFYKNRAAAYLKLDKYTEAVDDCTESLRF-- 81

Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            A +  +A+ R  +AY ALA  +EA +  + + +  P   
Sbjct: 82  -APNDPKALFRRAQAYEALAKPEEAYKDATALFKADPGNK 120


>gi|169849933|ref|XP_001831665.1| hypothetical protein CC1G_05736 [Coprinopsis cinerea okayama7#130]
 gi|116507303|gb|EAU90198.1| hypothetical protein CC1G_05736 [Coprinopsis cinerea okayama7#130]
          Length = 267

 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 27/72 (37%), Gaps = 10/72 (13%)

Query: 62  EKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+    L+E +   A + +    +  R+         SL       Y   +Y+QA +  +
Sbjct: 102 EQGTAKLEEGDVQAARDLYKRSVEIKRN-------ASSLFNLGVTYYHLKEYEQAIAAWK 154

Query: 119 EYITQYPESKNV 130
           E I   P S + 
Sbjct: 155 ESIALQPSSPDA 166


>gi|90420401|ref|ZP_01228308.1| glutathione S-transferase [Aurantimonas manganoxydans SI85-9A1]
 gi|90335129|gb|EAS48882.1| glutathione S-transferase [Aurantimonas manganoxydans SI85-9A1]
          Length = 225

 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 16/107 (14%)

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY--LKRGEYVAAIPRFQLV-----LANYS 221
           Y  + Y++ A+ +  V  + LA +E  +G  Y  +    +   I R ++V     LANY 
Sbjct: 120 YAANRYLREAQRHYQVLDDHLAGREFFVGDDYSIVDMAAWGW-IDRAKMVLGEGELANYP 178

Query: 222 DAE---HAEEAMARLVEAYV---ALALMDEAREVV--SLIQERYPQG 260
           +      A +A   + EA      +    E  E    +L  + YP G
Sbjct: 179 NLSRWFAAIDARPAVAEARKVGSDVGFKSERDEAALRALFPQNYPAG 225


>gi|16331646|ref|NP_442374.1| hypothetical protein sll0886 [Synechocystis sp. PCC 6803]
 gi|1001204|dbj|BAA10444.1| sll0886 [Synechocystis sp. PCC 6803]
          Length = 279

 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 31/240 (12%), Positives = 65/240 (27%), Gaps = 65/240 (27%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV------YEKAVLFLKEQN 72
           L K+   +  S+    LVG        V+           ++       +KA    +  +
Sbjct: 5   LRKYFALLMPSLWGIVLVGLLLFFPSPVWATESPIPLTDEQLEVGDSLTDKAFAATEAGD 64

Query: 73  FSKAYEYFNQCSRDFPFAG--VAR-------KSLLMSAFVQYSA---------------- 107
           F  A +Y+ +    FP      +        ++ L  A   ++                 
Sbjct: 65  FVTAEKYWTELIEKFPQNPAVWSNRGNSRVSQNKLDEAIADFNQAIELAPEQTDPYLNRG 124

Query: 108 ------GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
                 G+++ A +     +   PE     + Y   G +   +              L+ 
Sbjct: 125 TALEAKGEFKAAIADYNRVLAVNPED---AFAYNNRGNAEGGL--------GNWTSALED 173

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
             +      N  + +            LA  E+         G+   AI   + ++  Y 
Sbjct: 174 FQQATAIAPNFAFAQ--------ANTALALYEL---------GQKTEAIQTMRRLVKKYP 216


>gi|116208118|ref|XP_001229868.1| hypothetical protein CHGG_03352 [Chaetomium globosum CBS 148.51]
 gi|88183949|gb|EAQ91417.1| hypothetical protein CHGG_03352 [Chaetomium globosum CBS 148.51]
          Length = 796

 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 58/198 (29%), Gaps = 50/198 (25%)

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE-SKNVDY 132
            +A   F+   R           L   A   Y    Y  A  +     T  P   ++++ 
Sbjct: 498 QEALAAFSSLPRSHQDTPW---VLARVAKAHYELANYADAERIFRRLRTLAPTRHEDME- 553

Query: 133 VYY-------LVG--MSY-AQMIRDVPYDQRAT--------------KLMLQYMSRIVER 168
            +Y         G  +S+ A  + D+ +D                  +  LQ   R +  
Sbjct: 554 -FYSTVLWQLRKGTELSFLAHELTDMDWDSPQAWCVMGNAFSLDCDHEQALQCFKRAIHL 612

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
             N  Y              L   E  +     +  EY  A+  ++  +A   D  H   
Sbjct: 613 QPNFSYAY-----------TLQGHE-HV-----ENEEYDKALVSYRRAVAA--DKRHYN- 652

Query: 229 AMARLVEAYVALALMDEA 246
           A   + + Y  L   D+A
Sbjct: 653 AYYGIGKVYEKLGNYDKA 670


>gi|284036905|ref|YP_003386835.1| hypothetical protein Slin_1991 [Spirosoma linguale DSM 74]
 gi|283816198|gb|ADB38036.1| Tetratricopeptide TPR_2 repeat protein [Spirosoma linguale DSM 74]
          Length = 367

 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 25/208 (12%), Positives = 64/208 (30%), Gaps = 27/208 (12%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D  +    + +A + L+  + + +     + ++ +  +            V    GK  +
Sbjct: 116 DPDFGTAYFNRAEVLLETGDAAGSVSDLMRINKQYQDSTF---YQTRLGDVYVRLGKQAE 172

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A +  +  +   P++           ++    +    Y Q+A     + + R +      
Sbjct: 173 AQAAYDRALQLNPDNVE--------ALTNRGALL---YSQKAYDQAGEDIQRALRLNPKQ 221

Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGR---------YYLKRGEY-VAAIPRFQLVLANYSD 222
                 +  +       A   V + R         YYL    Y +  + R    L    +
Sbjct: 222 DAALNNQSLLLARVGNFAEALVYVERALALQPRQPYYLNNKAYLLLKLNRASEALPVVQE 281

Query: 223 AEHAEEAMARLVEAYVALALMDEAREVV 250
           +   ++   R   A+  L L   +++  
Sbjct: 282 SLQRDD---RNAWAHQTLGLYYLSQKQA 306


>gi|326201126|ref|ZP_08190998.1| Tetratricopeptide TPR_1 repeat-containing protein [Clostridium
           papyrosolvens DSM 2782]
 gi|325988694|gb|EGD49518.1| Tetratricopeptide TPR_1 repeat-containing protein [Clostridium
           papyrosolvens DSM 2782]
          Length = 292

 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 42/120 (35%), Gaps = 19/120 (15%)

Query: 61  YEKAVLFL-----KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           Y KA  FL     +     +A EY+ + +   P+   A       A V    GKY +A  
Sbjct: 96  YTKAYFFLANSCDEGGRKEEAAEYYEKAAELEPYHFWAYN---NLAAVYEEMGKYDKALI 152

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
              + +   P         +  G+   ++          T+  ++Y +  +E+    PY 
Sbjct: 153 AIRKGLRLEPNHFK---ALFNAGVIMNRL--------GYTQKAVEYYNTSIEKNPRYPYS 201


>gi|125598900|gb|EAZ38476.1| hypothetical protein OsJ_22864 [Oryza sativa Japonica Group]
          Length = 955

 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 17/116 (14%), Positives = 39/116 (33%), Gaps = 25/116 (21%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSR---DFP------FAGVARKSLLMSAFVQYSAGKYQQ 112
             ++  + E  + +A   F+Q  R    +P          A +  L SA        + +
Sbjct: 240 SNSMASVNEGRYDQAISIFDQILRETPTYPEALIGRGTAYAFQRELDSAIS-----DFTK 294

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           A     + +   P S ++    +  G+   +         +     ++ +S  V+R
Sbjct: 295 AVEDLTKALEFEPNSPDI---LHERGIVNFKF--------KDYNAAVEDLSTCVKR 339


>gi|145516108|ref|XP_001443948.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124411348|emb|CAK76551.1| unnamed protein product [Paramecium tetraurelia]
          Length = 572

 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 14/129 (10%), Positives = 36/129 (27%), Gaps = 21/129 (16%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQ 104
             S        ++ E+       + + KA   +++      + P +    +S        
Sbjct: 3   PKSRRSEPNPNQLKEEGNTAFLNRQYPKAINLYSKALQLEEN-PIS-YNNRSQ-----AY 55

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
              G+ + A     + +   P         Y+   +       V Y+    +  ++ +  
Sbjct: 56  LQTGELELALQDCNKALQLNPS--------YVKATTNKAQ---VLYEMGYLQQAIECLQS 104

Query: 165 IVERYTNSP 173
           I      S 
Sbjct: 105 INNHTPESE 113


>gi|123411998|ref|XP_001303975.1| TPR Domain containing protein [Trichomonas vaginalis G3]
 gi|121885395|gb|EAX91045.1| TPR Domain containing protein [Trichomonas vaginalis G3]
          Length = 908

 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 22/53 (41%), Gaps = 6/53 (11%)

Query: 64  AVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
             +  + + + ++ E+F +     F      +K+ L   F+    G Y +A S
Sbjct: 708 GHVEFERKRYQESAEWFEEGLELQFE-----QKAALRLGFIYLKLGDYLKAES 755


>gi|134045937|ref|YP_001097423.1| hypothetical protein MmarC5_0901 [Methanococcus maripaludis C5]
 gi|132663562|gb|ABO35208.1| TPR repeat-containing protein [Methanococcus maripaludis C5]
          Length = 409

 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 30/73 (41%), Gaps = 10/73 (13%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEEYITQYPESK 128
            N+ ++ E F++              L+     ++ Y   +Y++A    ++ +     ++
Sbjct: 140 GNYDESIESFDK-----STGNYEEIVLIWNELGYIYYQNEEYEKALECFDKALLL---NR 191

Query: 129 NVDYVYYLVGMSY 141
           N+ Y +   G+ Y
Sbjct: 192 NLKYSFNGKGLCY 204


>gi|86143796|ref|ZP_01062172.1| hypothetical protein MED217_00845 [Leeuwenhoekiella blandensis
           MED217]
 gi|85829839|gb|EAQ48301.1| hypothetical protein MED217_00845 [Leeuwenhoekiella blandensis
           MED217]
          Length = 524

 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 41/125 (32%), Gaps = 11/125 (8%)

Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL--AAKEV 194
             +++ Q    +  D +  +     +  I   Y +      A  Y     +    A  E 
Sbjct: 151 KALTFQQRSLQIYRDLKDVQGEAAVLENIGSIYEDLEDYDKAYSYFEKAFSYFKNAGNEA 210

Query: 195 EI------GRYYLKRGEYVAAIPRFQLVL---ANYSDAEHAEEAMARLVEAYVALALMDE 245
           ++         Y K+G Y  AI + Q  L     Y +A   E A   L +AY      ++
Sbjct: 211 QVNALNNLADVYRKKGNYAQAIAKTQEALALAETYKNAHQVESAYKDLAKAYALSQDFEQ 270

Query: 246 AREVV 250
           A    
Sbjct: 271 AHHYA 275


>gi|119358297|ref|YP_912941.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266]
 gi|119355646|gb|ABL66517.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeobacteroides
           DSM 266]
          Length = 243

 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 23/76 (30%), Gaps = 6/76 (7%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           +A   L + ++  A  +F +     P +  A  S       +  +G Y  A       I 
Sbjct: 33  QAEEQLDKGDYKSAITFFTKAIELDPQSIEAYNSR---GSAKAKSGDYPDAIEDFSIAIE 89

Query: 123 QYPESKNVDYVYYLVG 138
                 N    YY   
Sbjct: 90  L---DPNAAEAYYNRA 102


>gi|308270719|emb|CBX27329.1| hypothetical protein N47_H21510 [uncultured Desulfobacterium sp.]
          Length = 448

 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 3/54 (5%)

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           IG +YLK G +  AI  F+  L           A   L  AY+ +   ++A EV
Sbjct: 49  IGVWYLKTGRFDKAISEFETALTKNPGEPF---ATYYLGLAYLGMENFEKAIEV 99


>gi|307181746|gb|EFN69207.1| WD and tetratricopeptide repeats protein 1 [Camponotus floridanus]
          Length = 667

 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 15/122 (12%), Positives = 41/122 (33%), Gaps = 21/122 (17%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYS---AGK 109
            Y  E+  +A    ++Q +S A   +N+     P+A    A ++              G 
Sbjct: 360 PYVEELKRQANERFEQQKYSLAINLYNKAISYCPWAAVLFANRAA-----AYMKRAWDGD 414

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
              A    +   T + +S+++   ++ +      + R +           + +    +++
Sbjct: 415 IYAALRDCQ--TTLFLDSEHIK-AHFRLARCLFDLNRSI--------EAEKVLKNFQQKF 463

Query: 170 TN 171
             
Sbjct: 464 PE 465


>gi|297183434|gb|ADI19566.1| FOG: tpr repeat-protein [uncultured Acidobacteria bacterium
           HF0770_27F21]
          Length = 333

 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 47/144 (32%), Gaps = 30/144 (20%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ-------CSRDFPFAGVARKSLLMS 100
           ++ V +    +E++E+A+      +++ A   + +                         
Sbjct: 129 VEGVGNAAVNQEMFEEAIALSDAGDYAGAVAKYEEFMVANPHLDAVH----------GNI 178

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
                 AG  ++A    E+ +   P++           M+   M  ++  +    +  L 
Sbjct: 179 GNAYRDAGDVEKAREAYEKLLAAEPDNV----------MANYNM-GEMFVEAGDMEEALP 227

Query: 161 YMSRIVERYTNSP--YVKGARFYV 182
           Y   ++++  + P  Y   A  Y 
Sbjct: 228 YFESVLQQNPDDPAVYYNVAELYF 251


>gi|291326359|ref|ZP_06124222.2| methyl-accepting chemotaxis protein II [Providencia rettgeri DSM
           1131]
 gi|291314720|gb|EFE55173.1| methyl-accepting chemotaxis protein II [Providencia rettgeri DSM
           1131]
          Length = 561

 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 8/74 (10%), Positives = 25/74 (33%), Gaps = 10/74 (13%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--------A 90
           +  ++ D+   +  + +   + Y +    ++  ++ KA   F +    +          +
Sbjct: 83  DDATTEDLIKAAKRNFKSADDAYARYNKLMQSSDYDKA--KFEKLFSTYETYRDALIKLS 140

Query: 91  GVARKSLLMSAFVQ 104
             A K  L   +  
Sbjct: 141 EFAEKGDLEGFYAH 154


>gi|257468137|ref|ZP_05632233.1| hypothetical protein FulcA4_02297 [Fusobacterium ulcerans ATCC
           49185]
          Length = 470

 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 12/133 (9%), Positives = 42/133 (31%), Gaps = 24/133 (18%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAF-----VQYSAGKYQQA 113
                   + ++ +A  +F +    ++++        +     +             Q+A
Sbjct: 354 NDGESSFNKGSYVEALVHFEKALEINKNY--------AETKDIYFYMGQSNLQLDNGQKA 405

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
               ++ +           +YY +G++Y ++           +    Y + + ++Y  S 
Sbjct: 406 IENYKKALDLEKSDDKKAEIYYNMGIAYDKL--------GNKEESRNYFTFVRQKYPKSS 457

Query: 174 YVKGARFYVTVGR 186
           +   +  Y+    
Sbjct: 458 WSTKSSIYLLKLN 470


>gi|322419153|ref|YP_004198376.1| PEP-CTERM system TPR-repeat lipoprotein [Geobacter sp. M18]
 gi|320125540|gb|ADW13100.1| PEP-CTERM system TPR-repeat lipoprotein [Geobacter sp. M18]
          Length = 881

 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 80/243 (32%), Gaps = 38/243 (15%)

Query: 17  YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY---EKAVLFLKEQNF 73
           YQ+ K   ++   +A+      ++   + + +         R +     K  L + ++N+
Sbjct: 554 YQMAKQTRSVEAYLALAAYHQKKKSPEKALEVLDEAVKLDARNLVPLEAKGRLLMAQKNY 613

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
            +A + F++ S   P     R +LL       +  +  +A       I  +P S      
Sbjct: 614 KQALKVFDEVSALNP----DRGALLKVG-CYLAMKQGDKAVEQARRLIASHPSS------ 662

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
             + G     ++  +      T   +   ++ +     S             R  L    
Sbjct: 663 --VKG---YLLLASIFQGGGDTTSAIAQANQAIRVDGKS----------VEARVLL---- 703

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
              G  Y  R +  AA+  FQ  L    D+  A  A+A L+E        + A    S++
Sbjct: 704 ---GGLYRARKDNAAAMSAFQDALKVQPDSVPARFAVATLLEGTGK--KQEAAARYRSIL 758

Query: 254 QER 256
              
Sbjct: 759 DLN 761


>gi|254459050|ref|ZP_05072473.1| von Willebrand factor, type A [Campylobacterales bacterium GD 1]
 gi|207084321|gb|EDZ61610.1| von Willebrand factor, type A [Campylobacterales bacterium GD 1]
          Length = 615

 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 23/58 (39%), Gaps = 4/58 (6%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            +A    K +++ K+ + + +    +  +    +S   +    Y   KY++A    E 
Sbjct: 351 SEAKDAYKAEDYVKSAKLYEK----YAQSSKKGESFFNAGNSLYKQKKYKEAVEAYER 404


>gi|253701871|ref|YP_003023060.1| polar amino acid ABC transporter inner membrane protein [Geobacter
           sp. M21]
 gi|251776721|gb|ACT19302.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter
           sp. M21]
          Length = 339

 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 10/78 (12%), Positives = 26/78 (33%), Gaps = 9/78 (11%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCS-----RDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
            +++  A   +   +   A     +           F     +S +  A +Q++      
Sbjct: 33  DQIFSDANDAMGSGDLPAAIAILQKVEPDKGDDSGAF----VRSRMQIARLQFALKDMNA 88

Query: 113 AASLGEEYITQYPESKNV 130
           A++   E +  YP++   
Sbjct: 89  ASASANEVLALYPDNSEA 106


>gi|218248948|ref|YP_002374319.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC
           8801]
 gi|218169426|gb|ACK68163.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8801]
          Length = 363

 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 75/248 (30%), Gaps = 38/248 (15%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE-KAVLFLKEQNFSKAYEYFNQCSRD 86
             + V  L   + Q + + Y   +       E +       ++++   KA +Y N   + 
Sbjct: 148 IGLGVVLLRQNDYQGAAEAYKRVIALDPNNSEAFAIMGSSLIQQKELDKAIQYLNNAVKR 207

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
           FP   +  + LL +AF+       + A +  +      P +  V              I 
Sbjct: 208 FP-NDLELRLLLATAFL--EQDNNELAFNQLKSAERISPGNPKV-----------QLKIG 253

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
            +   Q      L+   RI     +S   +     + +                    +Y
Sbjct: 254 RILEQQNKLDDALKTYQRITYLSPSSTEARAGVGRIQLA-----------------TKDY 296

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP---QGYWA 263
           + A+  ++ + +   +          L  AY       EA + +   ++ Y         
Sbjct: 297 LGAVITYRELASMLPETPEPY---YYLGLAYKERGRKKEATKALEQARQLYQKQDNNKGI 353

Query: 264 RYVETLVK 271
             V+ L+K
Sbjct: 354 EEVDKLLK 361



 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 35/244 (14%), Positives = 83/244 (34%), Gaps = 52/244 (21%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            +   +    L    +     +     TD    +E+      ++  ++++ A   + +  
Sbjct: 10  LVSLFVMGLTLPANAQLQPLLILAQQSTDSEELKELLRLGREYVDLKDYNSAIVTYEKA- 68

Query: 85  RDFPFAGVARKSLLM---------SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
                      ++L            ++    G ++QA    ++ +T  P + +    YY
Sbjct: 69  -----------AILDGNNAKIFSGIGYLYAQKGNFRQAVKAYQQAVTLDPNNADF---YY 114

Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
            +G S A  I D      A    +Q   R+ + Y                        + 
Sbjct: 115 ALGFSLAN-IGDNENAASAYYYAIQLAPRVTKNY------------------------IG 149

Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           +G   L++ +Y  A   ++ V+A   +     EA A +  + +    +D+A + ++   +
Sbjct: 150 LGVVLLRQNDYQGAAEAYKRVIALDPNNS---EAFAIMGSSLIQQKELDKAIQYLNNAVK 206

Query: 256 RYPQ 259
           R+P 
Sbjct: 207 RFPN 210


>gi|162450831|ref|YP_001613198.1| hypothetical protein sce2559 [Sorangium cellulosum 'So ce 56']
 gi|161161413|emb|CAN92718.1| hypothetical protein predicted by Glimmer/Critica [Sorangium
           cellulosum 'So ce 56']
          Length = 279

 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 39/105 (37%), Gaps = 3/105 (2%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           IF +  +        +        +  D+   +  ++ A  F +  ++ +A +Y+     
Sbjct: 15  IFLAAGLALAGDPAIEYPECYRTATPADLEGAKGAHKAATQFYERADYDRAIQYW---KD 71

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
            +     A   L+  A      G+  +A +  E Y+ + P++ + 
Sbjct: 72  AYQLDCSAHGVLINIANAYEKKGERAEAVTALETYLARTPDASDA 116


>gi|225432356|ref|XP_002275310.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|297736897|emb|CBI26098.3| unnamed protein product [Vitis vinifera]
          Length = 560

 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 74/211 (35%), Gaps = 20/211 (9%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           + Y +A   +   ++    E F +  + FP        LL  A V+   GK  +A     
Sbjct: 216 QRYVEAQCCIASNDYKGGLELFTELLQRFPNNIH---ILLEIAKVEAIIGKNDEAIMN-- 270

Query: 119 EYITQYPESKNV-----DYVYYLVGMSYAQMIRDVPYDQ---RATK-LMLQYMSRIVERY 169
            +        ++     +Y   L+  S    +  + +D      T+  +   +S + ER 
Sbjct: 271 -FEKARSIDPHIITYMDEYAMLLMIKSDHLKLNKLVHDLLSIDPTRPEVFVALSVVWERK 329

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
                +  A   + +    +    ++ G  YL      AA+  F+       D    +  
Sbjct: 330 EERGALSYAEKSIRIDERHIPGYIMK-GNLYLSMNRPDAAVVAFRGAQELKPDLRSYQG- 387

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260
              LV +Y+AL+ + EA  V     +  PQ 
Sbjct: 388 ---LVRSYLALSKIKEALYVAREAMKAMPQS 415


>gi|152990153|ref|YP_001355875.1| von Willebrand factor type A domain-containing protein
           [Nitratiruptor sp. SB155-2]
 gi|151422014|dbj|BAF69518.1| von Willebrand factor type A domain protein [Nitratiruptor sp.
           SB155-2]
          Length = 549

 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 15/135 (11%), Positives = 42/135 (31%), Gaps = 34/135 (25%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           ++ ++A        +  A + F + +        + +S   +    Y A KY++A     
Sbjct: 338 KLIKQAKEAYDRGAYEVAAQKFKEIAEV----KGSAQSYFDAGNALYKAKKYKEAFQYYA 393

Query: 119 ---------EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI--VE 167
                    E+   +    N+       G  Y Q+        +  +  ++   +   ++
Sbjct: 394 KVQTEDKELEFRKLH----NM-------GNCYFQL--------QNYQKAIEMYEKALKLK 434

Query: 168 RYTNSPYVKGARFYV 182
              ++ Y       +
Sbjct: 435 NDPDTKYNLELAKKM 449


>gi|116326912|ref|YP_796632.1| TPR repeat-containing protein [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116332423|ref|YP_802141.1| TPR repeat-containing protein [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116119656|gb|ABJ77699.1| TPR-repeat-containing protein [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116126112|gb|ABJ77383.1| TPR-repeat-containing protein [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 500

 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 73/219 (33%), Gaps = 49/219 (22%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL----LMSAFVQYSAGKYQQAAS 115
           +Y+  V  ++ + +S+A E  ++            K L    L  A   +    Y++A  
Sbjct: 213 LYKYGVTLIRLEKYSEALEVLDKLEDK--IGMNNPKMLYYTNLNQAVAYHKMKHYEEAIK 270

Query: 116 LGEEYITQYPESKNVDYVYY-----LVGMSYAQM-IRDVPYDQRATKLMLQYMSRI--VE 167
             ++            Y        L+G++  +  I+D     +  +  L++  R   + 
Sbjct: 271 YYKK-----------SYAVNGTIQPLIGLTKLKYEIKDCENSIKTAEKALEFGERTHEIR 319

Query: 168 RY-----TNSPYVKGARFYVTVGRNQLAAKE---------------VEIGRYYLKRGEYV 207
            Y       +         +    ++L  KE               +++ RYY   GEY 
Sbjct: 320 MYLALCKIQNKEENEGYVILKEIASKL-EKENPEFKNLPDVYNDGILKLARYYTNHGEYT 378

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
            A+  F  V  +  +          L +AY     +D+A
Sbjct: 379 KALRYFHSVQVSEEEEREYR---FYLGKAYYYTGKVDQA 414


>gi|71361631|ref|NP_001025089.1| tetratricopeptide repeat protein 30A2 [Rattus norvegicus]
 gi|81918137|sp|Q4QQS2|T30A2_RAT RecName: Full=Tetratricopeptide repeat protein 30A2; Short=TPR
           repeat protein 30A2
 gi|67678066|gb|AAH98051.1| Tetratricopeptide repeat domain 30A1 [Rattus norvegicus]
 gi|149022322|gb|EDL79216.1| rCG26277 [Rattus norvegicus]
          Length = 664

 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 28/60 (46%), Gaps = 3/60 (5%)

Query: 66  LFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
             +++  +S+A +  +   +  P +  A  SLL  A+  Y   +++ AA   E+    +P
Sbjct: 20  RLIRDSRYSEAVQLLSAELQRSPRSR-AGLSLL--AYCYYRLQEFELAAECYEQLSQMHP 76


>gi|298675150|ref|YP_003726900.1| TPR repeat-containing protein [Methanohalobium evestigatum Z-7303]
 gi|298288138|gb|ADI74104.1| TPR repeat-containing protein [Methanohalobium evestigatum Z-7303]
          Length = 240

 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 39/108 (36%), Gaps = 8/108 (7%)

Query: 35  LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94
           L+G   ++     L        +R +  KA +   +  +  A E F +  +    +    
Sbjct: 75  LLGRPDEADEIAELIIELGTMNRRFLMFKAEVLSSKGRYEDAVELFEEAEKRD--SP--D 130

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
            + L  A      G+ +QA  +  + +  +   +    VYY+    YA
Sbjct: 131 DAPLAKAVHHIRYGEPEQAIEVCNDLLKWHQCHE----VYYVRAYVYA 174


>gi|256830934|ref|YP_003159662.1| peptidase M48 Ste24p [Desulfomicrobium baculatum DSM 4028]
 gi|256580110|gb|ACU91246.1| peptidase M48 Ste24p [Desulfomicrobium baculatum DSM 4028]
          Length = 445

 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 36/114 (31%), Gaps = 14/114 (12%)

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
           ++N   A +Y  +  R +P      ++  M          Y  A +    Y    P + +
Sbjct: 341 QKNGKGAADYAARAKRVYPTEA---QAQHMHGVASILNKDYAAALADFSAYERILPGNPS 397

Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
                ++ G SY  M        +  +   Q   R ++  T     + A   + 
Sbjct: 398 T---VFMKGFSYEGM--------KNKQNAAQEYHRYLKVVTQGEMAQHAYSRLK 440


>gi|218133792|ref|ZP_03462596.1| hypothetical protein BACPEC_01681 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991167|gb|EEC57173.1| hypothetical protein BACPEC_01681 [Bacteroides pectinophilus ATCC
           43243]
          Length = 464

 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 24/86 (27%), Positives = 32/86 (37%), Gaps = 11/86 (12%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
           L  + +  YS G+Y QA            +S   D  YY     Y      V  DQ  T+
Sbjct: 387 LYNTGYSNYSRGRYDQAVEDLTVAYKL--DSTKADAAYY-SAKCY------VALDQ--TE 435

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYV 182
              +Y   IV  +  S Y+  A  YV
Sbjct: 436 NAKKYYQYIVTNFPTSRYISEATTYV 461


>gi|154335407|ref|XP_001563942.1| serine/threonine protein phosphatase type 5 [Leishmania
           braziliensis MHOM/BR/75/M2904]
          Length = 468

 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 18/139 (12%), Positives = 43/139 (30%), Gaps = 25/139 (17%)

Query: 62  EKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           ++  ++ +E+ F  A + ++                L   AF          A +  +E 
Sbjct: 9   QEGNVYFQEKKFQHAVDSYSLAIEA-----HKTPTLLCNRAFAYLKLELPGAALADAQEA 63

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           I   P        +Y    ++  +           K   +  + +++    S   K A+ 
Sbjct: 64  IEIDPGFVK---AHYRKASAHLLL--------GKFKDAQREFAAVLKLVP-SE--KDAQR 109

Query: 181 YVTVGRNQLAAKEVEIGRY 199
              +       KE++  R+
Sbjct: 110 KYDLC-----EKELKRIRF 123


>gi|30249415|ref|NP_841485.1| TPR repeat-containing protein [Nitrosomonas europaea ATCC 19718]
 gi|30138778|emb|CAD85355.1| TPR repeat [Nitrosomonas europaea ATCC 19718]
          Length = 929

 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 65/190 (34%), Gaps = 35/190 (18%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA--RKSLLMSAFVQYSAGKYQQAASLGEE 119
            +A + +  + F  A    +   +  P + +A   ++LL      +S GK+  A    + 
Sbjct: 244 NRATISISTKKFEAAQADLDAVRKIAPGSLLAAYTQALLD-----FSQGKHAVALETLQR 298

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            ++  P    +  V  L G +   +         +     QY+ + ++   N+ Y     
Sbjct: 299 ILSSAPGH--LPSVL-LAGATQFAL--------GSFPQAGQYVEQYLKAIPNNLYAIKLM 347

Query: 180 FYVTVGRNQL---------AAKEVE--------IGRYYLKRGEYVAAIPRFQLVLANYSD 222
             + +  NQ+         A K V+         G  Y++  ++  A   F+       D
Sbjct: 348 ASIQLKNNQVKQAITTLTPALKSVQQDPQLFALAGEAYMRSKDFTKASEYFEKAGELAPD 407

Query: 223 AEHAEEAMAR 232
                 A+A 
Sbjct: 408 NASLYTALAM 417


>gi|86137861|ref|ZP_01056437.1| TPR domain protein [Roseobacter sp. MED193]
 gi|85825453|gb|EAQ45652.1| TPR domain protein [Roseobacter sp. MED193]
          Length = 189

 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 43/135 (31%), Gaps = 17/135 (12%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +  +A   +   +   A E+    +   P    A +     A V ++ G Y  + +  E 
Sbjct: 72  LLSRATKAMMAGDLPVALEHLTALTDHAP--DFA-RGWYERARVFHALGAYGPSVADLER 128

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +   P   +  Y     G +  +  RD            +   R    + +   V  A 
Sbjct: 129 ALALNPNDYDAIYAL---G-TVFEQFRDPKR-------AYEVYLRAKAIHPHHEEVLSAL 177

Query: 180 FYVTVGRNQLAAKEV 194
                 R ++A K++
Sbjct: 178 ER---LRPEVAGKDL 189


>gi|46116562|ref|XP_384299.1| hypothetical protein FG04123.1 [Gibberella zeae PH-1]
          Length = 509

 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 13/102 (12%), Positives = 30/102 (29%), Gaps = 18/102 (17%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
            A+       F +A   F +            K L     +  + G++++A    +  I 
Sbjct: 12  AALGRYDNNEFEEALNEFGKIGD-------TSKILFNMGVIHATLGEHEKAVESYQRAIR 64

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
                + +   Y+  G+S   +           +  L   + 
Sbjct: 65  L---DQYLAVAYFQQGVSNFLL--------GDFEEALANFND 95


>gi|295707125|ref|YP_003600200.1| hypothetical protein BMD_5051 [Bacillus megaterium DSM 319]
 gi|294804784|gb|ADF41850.1| conserved hypothetical protein [Bacillus megaterium DSM 319]
          Length = 500

 Score = 36.6 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 7/71 (9%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           E+A   L+  NF +A +   +   ++P  ++          A   +   K  +A  L  E
Sbjct: 160 EQAKRLLEATNFEEAVDLLTEIIDEYPEFWSAYN-----NLALAYFYLNKIDEAMDLLNE 214

Query: 120 YITQYPESKNV 130
            + + P + + 
Sbjct: 215 VLEKNPGNLHA 225


>gi|281340093|gb|EFB15677.1| hypothetical protein PANDA_004445 [Ailuropoda melanoleuca]
          Length = 859

 Score = 36.6 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 43/133 (32%), Gaps = 30/133 (22%)

Query: 45  DVYLDSVTDVRYQ---REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG----VARKSL 97
           D     VT +      RE Y + +  L+++++  A  +F++       +      A ++ 
Sbjct: 40  DDVKPKVTGLTVPLKVREYYHQGLQCLEKEDWEMAVLFFSR--ALHLDSQLVDFYALRAE 97

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY------VYYLVGMSYAQMIRDVPYD 151
                       +  AA       +  P  +N  Y      V YL G    + +      
Sbjct: 98  -----AYIQLCDFSSAAQNLRRAYSFQP--ENTKYLERLTLVLYLQGQCLFEQL------ 144

Query: 152 QRATKLMLQYMSR 164
             A +  L+   +
Sbjct: 145 --AFREALKVFLQ 155


>gi|149202967|ref|ZP_01879938.1| TPR domain protein [Roseovarius sp. TM1035]
 gi|149143513|gb|EDM31549.1| TPR domain protein [Roseovarius sp. TM1035]
          Length = 595

 Score = 36.6 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 36/107 (33%), Gaps = 14/107 (13%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           +      A E   Q ++D+P   +A    +    +  S   +  A    +  +  Y +S+
Sbjct: 362 RAGKPDAAIEVLEQLAKDYP--NLAE-VHVAVGDLHRSQEDFSAAVPAYDRALELY-QSR 417

Query: 129 NVD--YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
             D  +V Y   +S+ ++                   R +E   + P
Sbjct: 418 GNDQWFVRYARAISHERLDNWP--------EAEADFRRALELNPDHP 456



 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 40/124 (32%), Gaps = 19/124 (15%)

Query: 73  FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
           + +A E +     D  F   AR      A        + +A +     +   P+   V  
Sbjct: 407 YDRALELYQSRGNDQWFVRYAR------AISHERLDNWPEAEADFRRALELNPDHPQV-- 458

Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
              L  + Y  + + +  D       L  + R V    +S Y+  +  +V     +L   
Sbjct: 459 ---LNYLGYTMVEKHINLD-----EALNMIERAVAAQPDSGYIVDSLGWVLY---RLGRY 507

Query: 193 EVEI 196
           E  I
Sbjct: 508 EEAI 511


>gi|50423773|ref|XP_460471.1| DEHA2F02464p [Debaryomyces hansenii CBS767]
 gi|49656140|emb|CAG88778.1| DEHA2F02464p [Debaryomyces hansenii]
          Length = 708

 Score = 36.6 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 39/141 (27%), Gaps = 28/141 (19%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGK 109
           D       Y    + +   +F+ AYE F Q        P              + Y   +
Sbjct: 302 DQSDAHSWYYLGRVHMIRGDFNAAYEAFQQAVNRDSRNP-TFWC-----SIGVLYYQISQ 355

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSY---AQMIRDVPYDQRATKLMLQYMSRIV 166
           Y+ A       I   P    +  V+Y +G  Y      I D           L    +  
Sbjct: 356 YRDALDAYTRAIRLNP---YISEVWYDLGTLYETCNNQISD----------ALDAYRQAE 402

Query: 167 ERYTNSPYVKGARFYVTVGRN 187
               ++P++   +  +     
Sbjct: 403 RLDPSNPHI---KARLDQLIK 420


>gi|157384182|gb|ABV49442.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 241 [Homo sapiens]
          Length = 1047

 Score = 36.2 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLXT 231


>gi|328772892|gb|EGF82929.1| hypothetical protein BATDEDRAFT_84452 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 495

 Score = 36.2 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 46/136 (33%), Gaps = 35/136 (25%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF-----VQYSAGKYQQAAS 115
           Y   +  ++  N  +A   F++      +        L  A+      QY  G++ +A +
Sbjct: 40  YNVGMCAMRTNNLDEAIAAFSRAITLDEY--------LSVAYMQIGICQYHMGEFDEALA 91

Query: 116 LGEEYITQYPESKNVDY-------------VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             EE       +  +DY               + + + + Q           T+  ++Y+
Sbjct: 92  NFEESFKMLRGNFFIDYTQLGMEFQVFACHAIFNIALCHLQR--------GDTERGVRYI 143

Query: 163 SRIVERYT-NSPYVKG 177
           S  ++    +S +V  
Sbjct: 144 SEAIKAVPVDSDFVPD 159


>gi|320536427|ref|ZP_08036464.1| tetratricopeptide repeat protein [Treponema phagedenis F0421]
 gi|320146737|gb|EFW38316.1| tetratricopeptide repeat protein [Treponema phagedenis F0421]
          Length = 865

 Score = 36.2 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 73/226 (32%), Gaps = 45/226 (19%)

Query: 53  DVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGK 109
           + + + E+Y     L+L+ + F KA   + +          A+ + +      V    GK
Sbjct: 39  EKQDEYEIYSALGQLYLRSEQFQKALSVYKKLQMQN-----AQDADVLNNLGTVYRRLGK 93

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
             ++ ++ +  +      KN + V Y +G +Y +                    +++E  
Sbjct: 94  LPESVAILKTALKL---GKNRETVLYNLGNTYKEG--------EVYDRAADCFKQVLELN 142

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYY--------------------LKRGEYVAA 209
            N      A  ++   +      E+ I  YY                     K+G+  AA
Sbjct: 143 PNDVL---AYNHLGTIQALEKKTELAIETYYKGLLLDPNHPFLHFNLANIFYKQGKLTAA 199

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           +  +   +          EA   + + Y+ +   D A      + +
Sbjct: 200 LESYLEAVKTMPG---FIEAQKNIADIYLKIGKTDLALHSYKTLIQ 242


>gi|320109185|ref|YP_004184775.1| tetratricopeptide repeat-containing protein [Terriglobus saanensis
           SP1PR4]
 gi|319927706|gb|ADV84781.1| Tetratricopeptide TPR_1 repeat-containing protein [Terriglobus
           saanensis SP1PR4]
          Length = 606

 Score = 36.2 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 19/159 (11%), Positives = 43/159 (27%), Gaps = 21/159 (13%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQ----SSRDVYLDSVTDVRYQREVYEK--AVLFLKEQN 72
           + +  + I  ++AV    G  R+    +          +     ++ +   A   L  + 
Sbjct: 413 MPRVQIVIAATLAVIMAFGIRREIYVWADNISLFTRAVERSPGNKIAQHDLAAGLLDAKR 472

Query: 73  FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
           +  A     +  R+ P   V             + G    A     +    +P ++    
Sbjct: 473 YEDAIPLLQKLLREEPNDPVGNN---NLGQAYLNLGDRIHAEGYLAKSCQIHPTARQ--- 526

Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
             Y +G     + R             Q   + +    N
Sbjct: 527 -LYQLGAVRFNLGR--------ADAAEQTFRQAIAMDPN 556


>gi|291536706|emb|CBL09818.1| Tetratricopeptide repeat [Roseburia intestinalis M50/1]
 gi|291537989|emb|CBL11100.1| Tetratricopeptide repeat [Roseburia intestinalis XB6B4]
          Length = 454

 Score = 36.2 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 35/89 (39%), Gaps = 9/89 (10%)

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
           SL    +  Y++ K++++ +  ++ +      K+  Y  Y +  +Y              
Sbjct: 373 SLYNQGYSDYNSQKFEESITSLQKVVDMEETYKD-GYALYYLAQAY--------RKNNDL 423

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTV 184
           +    Y  +IVE Y  +     A+ Y+ +
Sbjct: 424 ETAKTYYQKIVELYPGTERAANAQNYINI 452


>gi|284054827|ref|ZP_06385037.1| TPR repeat-containing protein [Arthrospira platensis str. Paraca]
          Length = 153

 Score = 36.2 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 49/158 (31%), Gaps = 28/158 (17%)

Query: 24  LTIFFSIAVCFL---------VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
           L +F ++  C+L         + W    +    +  ++      E+ E+A    +   F 
Sbjct: 5   LILFLTVVFCWLWLGVVSPYNLAWAATETVGETVAEIS-TLSLDELLERAFSTSQAGRFP 63

Query: 75  KAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
           +A  Y+ +    +P      + +  +       S  +  +A       I   P       
Sbjct: 64  EAESYWTEIINRYPDNPAMWSNRGNVRV-----SQNRLTEAIGDYNRAIELAPT---AAD 115

Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
            Y   G++Y  + R            +   +R +E   
Sbjct: 116 AYLNRGVAYEGLGRWSD--------AIADYNRTLELSP 145


>gi|269963686|ref|ZP_06178008.1| fimbrial biogenesis and twitching motility protein, putative
           [Vibrio harveyi 1DA3]
 gi|269831598|gb|EEZ85735.1| fimbrial biogenesis and twitching motility protein, putative
           [Vibrio harveyi 1DA3]
          Length = 253

 Score = 36.2 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 65/202 (32%), Gaps = 30/202 (14%)

Query: 9   ICIFEAWAYQLYKFALTIFFSIAVCFLVGWER--QSSRDVYLDSVTDVRYQREVYEKAVL 66
           +C    W   +    L      +   LVG     +      + +      +  +    + 
Sbjct: 2   LCESGMWGIYMKLGKLGALVLASQLGLVGCVTVNEDGNSPVVKADPVSMAESRI-ALGLG 60

Query: 67  FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
           +L+  +  +A++   Q     P +    ++ L  A    + G+  +AA + +  + Q+P+
Sbjct: 61  YLESGSMIRAHDNLQQALTHAP-SYY--RAQLSMAHYYETVGEDSKAAQMYKRSLRQHPK 117

Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY-----VKGARFY 181
           + NV        ++           Q       +  +R +E+    PY            
Sbjct: 118 NGNV--------LNNY---GTFLCKQGEYSQADKMFNRAIEQ----PYYYLIPASYENAG 162

Query: 182 VTVGRNQLAAKEVEIGRYYLKR 203
               ++  A K     +YY  R
Sbjct: 163 FCALKSNQAEK----AKYYFTR 180


>gi|255264719|ref|ZP_05344061.1| peptidoglycan-binding domain 1 [Thalassiobium sp. R2A62]
 gi|255107054|gb|EET49728.1| peptidoglycan-binding domain 1 [Thalassiobium sp. R2A62]
          Length = 559

 Score = 36.2 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 33/78 (42%), Gaps = 8/78 (10%)

Query: 162 MSRIVERYTNSPYVKGARFYVTVG----RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
           +   +ERY +  + + A+  +       R++ A +E +  ++   R  +  A   +Q  L
Sbjct: 397 LRSYIERYPDGAFSEEAKERLAAIEEDKRDR-ADRE-DRAQWNQARSSHTVAA--YQTYL 452

Query: 218 ANYSDAEHAEEAMARLVE 235
             +       EA AR+ E
Sbjct: 453 RRFPGGAFRNEAQARIAE 470


>gi|291287830|ref|YP_003504646.1| Tetratricopeptide TPR_2 repeat protein [Denitrovibrio acetiphilus
           DSM 12809]
 gi|290884990|gb|ADD68690.1| Tetratricopeptide TPR_2 repeat protein [Denitrovibrio acetiphilus
           DSM 12809]
          Length = 464

 Score = 36.2 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 68/191 (35%), Gaps = 38/191 (19%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCS-RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y  A+  + ++N+++A +  ++    D  F      +  +S ++ Y A KY+ A      
Sbjct: 241 YLTALEKVNDKNYTEAGQILDEIKTSDDTFGS----AFFLSGYIAYVARKYETAIESLRR 296

Query: 120 YITQYPESKNVDYVYYLVGMSYAQM-IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
                P  +N  Y+     +SY    +++  YD        Q + + VE   +      A
Sbjct: 297 ACELEP--ENAAYL-----VSYGNACLKEKKYD-----DASQALKKAVEIKPD-----DA 339

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
             +     N LA         Y+   +   A+  F        D     EA+  L  A  
Sbjct: 340 SAW-----NNLAHS-------YIVSDKIDDAVMAFSKATELKPD---FHEALHNLGLALG 384

Query: 239 ALALMDEAREV 249
            L   +EA + 
Sbjct: 385 KLKRYEEAADA 395


>gi|224003111|ref|XP_002291227.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220973003|gb|EED91334.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 646

 Score = 36.2 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 13/89 (14%)

Query: 66  LFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
            ++++  + KA E F       R  P       +L + A+  Y    Y +AA   EE + 
Sbjct: 14  DYIRDGEYEKAIEIFETNLDIPRTRP-------ALSLLAYCSYHNQDYARAAEFYEELVA 66

Query: 123 QYPESKNVDY-VYYLVGMSYAQMIRDVPY 150
             PE++   Y VY+   +  A+   D   
Sbjct: 67  LCPETEE--YQVYFTQSLVMAEAFLDATR 93


>gi|116250229|ref|YP_766067.1| adenylate cyclase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115254877|emb|CAK05951.1| putative adenylate cyclase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 623

 Score = 36.2 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 15/41 (36%), Gaps = 1/41 (2%)

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
             S++  A  Q   G Y  A +  E     +P +    Y Y
Sbjct: 488 PDSMIALAKAQVRFGDYPDAVANAERARRLHPMAPEY-YAY 527


>gi|78356518|ref|YP_387967.1| TPR repeat-containing protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78218923|gb|ABB38272.1| TPR repeat [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 204

 Score = 36.2 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 5/61 (8%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-KSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           A  F+   ++ +A  + N+     P    A  + L M    QY  G++ +AA+  E  I 
Sbjct: 91  AQHFMDTGDWQRAQTFLNKLVVAAP----ADSRPLYMLGISQYQLGQHAEAATTFERLIK 146

Query: 123 Q 123
            
Sbjct: 147 L 147


>gi|15639460|ref|NP_218910.1| hypothetical protein TP0469 [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|3322750|gb|AAC65450.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum
           str. Nichols]
          Length = 487

 Score = 36.2 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 46/159 (28%), Gaps = 22/159 (13%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG-------VARKSLLMSA 101
           ++ T   +   +  +     + +++  A   FN+  R  P            R    M A
Sbjct: 163 ETATPQHHVHALLSEGKELTERRDYPGAVRVFNKAIRALPAGDAVFAADAYTRMGEAMYA 222

Query: 102 FVQYSAGK-------YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
             Q+            + A    +E +   P S      +YL          D   DQ  
Sbjct: 223 LSQHDNRDGFERTRALETATVYVKEALRLNPRSAA---AHYLAACIADAQPDD---DQTT 276

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
              +L+  + +  R     Y       +   R    A+E
Sbjct: 277 ALTLLERAAALDRR--EYRYSYELGKRLFAVRRFAEAQE 313


>gi|148252938|ref|YP_001237523.1| putative adenylate cyclase [Bradyrhizobium sp. BTAi1]
 gi|146405111|gb|ABQ33617.1| putative Adenylate cyclase [Bradyrhizobium sp. BTAi1]
          Length = 581

 Score = 36.2 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 25/71 (35%), Gaps = 13/71 (18%)

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ-RATKLML 159
           A+  Y   +Y+ A S   E +  YP          L  ++    IR     Q   T    
Sbjct: 491 AYSHYLLDRYEAALSWAREELFLYPNH--------LQALT----IRAATLAQLGETDQAR 538

Query: 160 QYMSRIVERYT 170
           Q +  + ERY 
Sbjct: 539 QAIGVLGERYP 549



 Score = 35.9 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 3/55 (5%)

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
             Y AA+   +  L  Y +     +A+         L   D+AR+ + ++ ERYP
Sbjct: 498 DRYEAALSWAREELFLYPN---HLQALTIRAATLAQLGETDQARQAIGVLGERYP 549


>gi|326492345|dbj|BAK01956.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 589

 Score = 36.2 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 65/178 (36%), Gaps = 26/178 (14%)

Query: 35  LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ----CSRDFPFA 90
           LV +E++        +   +    +  ++  ++ K   ++KA + + +       D  F+
Sbjct: 397 LVSFEKEKESWDLKSNAEKIEAASKKKDEGNVWFKMGKYAKASKRYEKAAKYIEYDSSFS 456

Query: 91  GVARK--------SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
              +K          L +A  +     Y++A  L  + +    ES NV    Y    +Y 
Sbjct: 457 EDEKKQTKAVKISIKLNNAACKLKLKDYKEAEKLCTKVLEL--ESTNVK-ALYRRAQAYT 513

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
           Q++          +L    + + +E   ++  VK A       +++L        ++Y
Sbjct: 514 QLVD--------LELAELDIKKALEIDPDNREVKVAYK---ALKDKLREYNKRDAKFY 560


>gi|319952793|ref|YP_004164060.1| tetratricopeptide tpr_1 repeat-containing protein [Cellulophaga
           algicola DSM 14237]
 gi|319421453|gb|ADV48562.1| Tetratricopeptide TPR_1 repeat-containing protein [Cellulophaga
           algicola DSM 14237]
          Length = 252

 Score = 36.2 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 8/84 (9%), Positives = 26/84 (30%), Gaps = 7/84 (8%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             ++++ A     +  +  A + + +   +      + +       V Y   K   +   
Sbjct: 20  NAKLFDAANTAYNDGKYEVAEKTYLKIVDN---GEASSELYFNLGNVYYKENKIAPSIYY 76

Query: 117 GEEYITQYPESKNV----DYVYYL 136
            E+ +   P   ++     Y   +
Sbjct: 77  YEKALLLKPNDSDIKNNLAYAQNM 100


>gi|318042848|ref|ZP_07974804.1| TPR repeat-containing protein [Synechococcus sp. CB0101]
          Length = 256

 Score = 36.2 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 26/74 (35%), Gaps = 5/74 (6%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           +      +Y    +      ++ A + F        P   +AR S   +A   +  G+  
Sbjct: 122 EPPDASALYNLGNVQGSRGQWTDARDSFVEAADTR-PGFAMARSS---AALAAFQLGELD 177

Query: 112 QAASLGEEYITQYP 125
           QA +     I +YP
Sbjct: 178 QAEAELRRLIRRYP 191


>gi|300115220|ref|YP_003761795.1| peptidase M48 Ste24p [Nitrosococcus watsonii C-113]
 gi|299541157|gb|ADJ29474.1| peptidase M48 Ste24p [Nitrosococcus watsonii C-113]
          Length = 536

 Score = 36.2 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 41/127 (32%), Gaps = 18/127 (14%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFV 103
             L  +  V      Y++    L+E N  +A     +     P     R++L   +   V
Sbjct: 283 AKLAPLKQVETAYAAYDQGRKALQEGNLEQALGLAERAITKEP-----REALFYGLRGDV 337

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
             +  +YQ+A +     I     + +  Y Y   G+    +          ++   Q + 
Sbjct: 338 HLAKERYQEALADYNRAIK---RNDHFFYFYNQRGLVNKAL--------GHSEKARQDLR 386

Query: 164 RIVERYT 170
           + +    
Sbjct: 387 QSIALLP 393


>gi|288942093|ref|YP_003444333.1| TPR repeat-containing protein [Allochromatium vinosum DSM 180]
 gi|288897465|gb|ADC63301.1| TPR repeat-containing protein [Allochromatium vinosum DSM 180]
          Length = 590

 Score = 36.2 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 62/166 (37%), Gaps = 23/166 (13%)

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
             K  +A +L E ++   P  + +        M Y Q++     D+R      +   R++
Sbjct: 240 DDKRPEARALLESFVETNPGDRALK-------MLYGQLLV----DEREFSTAREVFERML 288

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA-------IPRFQLV--- 216
             Y   P V  A   +++    LA   +  GR Y        A         R + V   
Sbjct: 289 REYPKDPDVLFAVGILSLQLEDLAGARLHFGRLYETGQRQDEAAFYLGQTAERAEDVATA 348

Query: 217 LANYSDAE--HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
           L  Y+     +A++A  RL         + +ARE++  ++++ P  
Sbjct: 349 LDWYAKVSGANADDARVRLAFLRAKRGEVAQAREILQRMRDQSPDN 394


>gi|239832835|ref|ZP_04681164.1| TPR repeat-containing protein [Ochrobactrum intermedium LMG 3301]
 gi|239825102|gb|EEQ96670.1| TPR repeat-containing protein [Ochrobactrum intermedium LMG 3301]
          Length = 230

 Score = 36.2 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 42/130 (32%), Gaps = 17/130 (13%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           + + A   + EQ +  A ++ N+     P    A  +    A V +    Y  A      
Sbjct: 113 LMQWANAAMLEQRYPSAIDFLNEAIALDP--EYAE-AWNRRATVYFLKKDYAHAMYDINR 169

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +   P          L GM+    +R +       +  L+   + +  Y     ++ A+
Sbjct: 170 TLELEPRHYGA-----LTGMATILRLRGLK------EQALKAYEQALIVYPM---MRDAQ 215

Query: 180 FYVTVGRNQL 189
                  ++L
Sbjct: 216 KNFNDLADEL 225


>gi|119512304|ref|ZP_01631390.1| hypothetical protein N9414_22308 [Nodularia spumigena CCY9414]
 gi|119463017|gb|EAW43968.1| hypothetical protein N9414_22308 [Nodularia spumigena CCY9414]
          Length = 280

 Score = 36.2 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 12/96 (12%), Positives = 28/96 (29%), Gaps = 16/96 (16%)

Query: 34  FLVGWERQSSRDVYLDSVT-------DVRYQREVYEKAVLFLKEQNFSKAYEYFN---QC 83
           FL+G     ++D              + +    ++       ++QN+  A   +    + 
Sbjct: 82  FLLGGLHLQAKDFEPAMAALQKAQSLNPQNPEILFALGSANFQKQNYQAAATLYQQGLKL 141

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
             D P                Y  G+  +A +   +
Sbjct: 142 KSDNPEGWF------DLGNAYYMLGRLPEAIAQYNK 171


>gi|222054406|ref|YP_002536768.1| Peptidoglycan-binding LysM [Geobacter sp. FRC-32]
 gi|221563695|gb|ACM19667.1| Peptidoglycan-binding LysM [Geobacter sp. FRC-32]
          Length = 198

 Score = 36.2 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 22/47 (46%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
           Y++A+   K+   SKA + F +   +FP + +A  + L  A      
Sbjct: 149 YQRAIAAYKKGQLSKALQEFERFLAEFPNSPLAADASLYRADCLLKM 195


>gi|22299903|ref|NP_683150.1| hypothetical protein tlr2360 [Thermosynechococcus elongatus BP-1]
 gi|22296088|dbj|BAC09912.1| tlr2360 [Thermosynechococcus elongatus BP-1]
          Length = 350

 Score = 36.2 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 13/94 (13%), Positives = 33/94 (35%), Gaps = 10/94 (10%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYS 106
            V        + ++    ++  N+++A   + Q        P      +      ++   
Sbjct: 21  PVHANSPVSRLMQEGQRLVEGGNYAQALAIYQQLLESESRNP------RVHSAIGYIYAQ 74

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVY-YLVGM 139
            G++ +AA   +  I    ++ +  Y   Y +GM
Sbjct: 75  QGQFGEAARAYQRAIELDQQNADFYYALGYSLGM 108


>gi|332716357|ref|YP_004443823.1| transcriptional regulator, SARP family [Agrobacterium sp. H13-3]
 gi|325063042|gb|ADY66732.1| transcriptional regulator, SARP family [Agrobacterium sp. H13-3]
          Length = 642

 Score = 36.2 bits (83), Expect = 4.3,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 7/59 (11%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
            KR +Y AA+     +  +       E A+  L  ++     +D ARE  S +QE YP 
Sbjct: 560 FKREDYGAAVELCARMEND-------EPALRVLTASHALHGDLDAARETGSRLQENYPG 611


>gi|322504590|emb|CAM37991.2| putative serine/threonine protein phosphatase type 5 [Leishmania
           braziliensis MHOM/BR/75/M2904]
          Length = 469

 Score = 36.2 bits (83), Expect = 4.3,   Method: Composition-based stats.
 Identities = 18/139 (12%), Positives = 43/139 (30%), Gaps = 25/139 (17%)

Query: 62  EKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           ++  ++ +E+ F  A + ++                L   AF          A +  +E 
Sbjct: 9   QEGNVYFQEKKFQHAVDSYSLAIEA-----HKTPTLLCNRAFAYLKLELPGAALADAQEA 63

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           I   P        +Y    ++  +           K   +  + +++    S   K A+ 
Sbjct: 64  IEIDPGFVK---AHYRKASAHLLL--------GKFKDAQREFAAVLKLVP-SE--KDAQR 109

Query: 181 YVTVGRNQLAAKEVEIGRY 199
              +       KE++  R+
Sbjct: 110 KYDLC-----EKELKRIRF 123


>gi|315453877|ref|YP_004074147.1| hypothetical protein HFELIS_14730 [Helicobacter felis ATCC 49179]
 gi|315132929|emb|CBY83557.1| putative periplasmic protein [Helicobacter felis ATCC 49179]
          Length = 331

 Score = 36.2 bits (83), Expect = 4.3,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 53/140 (37%), Gaps = 13/140 (9%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
              ++    D   D+  + +++++A+   ++++F +A   F     +             
Sbjct: 183 TSQNKSEEADFNKDLSRKPKIFQEALSLYRQKHFKQAQARFVWLGDN----------DFK 232

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLM 158
           SA+  Y AG+   A    +E I  Y +S  +     Y+  + +           + T   
Sbjct: 233 SAYSYYMAGEAAYAQKNYKEAIVLYKKSALIKEKAEYMPVLLWHTAWSFRFLGNQNTY-- 290

Query: 159 LQYMSRIVERYTNSPYVKGA 178
           L+++  +   Y +S   K A
Sbjct: 291 LKFLHSLSSLYPDSEQGKKA 310


>gi|297691491|ref|XP_002823118.1| PREDICTED: transmembrane and TPR repeat-containing protein 1-like
           isoform 2 [Pongo abelii]
          Length = 882

 Score = 36.2 bits (83), Expect = 4.3,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 52/155 (33%), Gaps = 30/155 (19%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP-YDQRAT 155
           LL + +       + +A    ++ +   P+   V        +S     +     +Q   
Sbjct: 756 LLSAIYS--KQENHDKALDAIDKALQLKPKDPKV--------ISELFFTKGNQLREQNLL 805

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVG-RNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
               +     V+   +      A+ ++ +G    +             +G+YV+A   ++
Sbjct: 806 DKAFESYRVAVQLNPD-----QAQAWMNMGGIQHI-------------KGKYVSARAYYE 847

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
             L    D++  +E +A+L      L  + E  + 
Sbjct: 848 RALQLVPDSKLLKENLAKLDRLEKRLQEVREKDQT 882


>gi|225718258|gb|ACO14975.1| FK506-binding protein 6 [Caligus clemensi]
          Length = 334

 Score = 36.2 bits (83), Expect = 4.3,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 37/88 (42%), Gaps = 8/88 (9%)

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
           ++ E        + A   + + + +L      +G  +L+ G+Y       + VLA+  D 
Sbjct: 206 KLFEILPVKDDKEDAERKILLHKLRL-----NVGLCFLQTGKYAPTCGVMREVLADEPD- 259

Query: 224 EHAEEAMARLVEAYVALALMDEAREVVS 251
                A+ R+ +A   L  ++EAR  + 
Sbjct: 260 --NVRALYRMGKAKRMLGGIEEARSYLK 285


>gi|195995663|ref|XP_002107700.1| hypothetical protein TRIADDRAFT_18957 [Trichoplax adhaerens]
 gi|190588476|gb|EDV28498.1| hypothetical protein TRIADDRAFT_18957 [Trichoplax adhaerens]
          Length = 938

 Score = 36.2 bits (83), Expect = 4.3,   Method: Composition-based stats.
 Identities = 15/119 (12%), Positives = 36/119 (30%), Gaps = 18/119 (15%)

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA------------RFYVTVGRN 187
           +  Q  +D   ++R     L    +++     + Y                       + 
Sbjct: 619 TLYQPTKDPDKNRRHRDRALSLYKQVIRLDPRNIYAANGIGAVLAQSSFHQESREIFAQV 678

Query: 188 QLAAKEVE-----IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
           + A  ++      +   Y ++ +Y  AI  ++  +  +S      E +  L  AY    
Sbjct: 679 REATADMFDVWLNLAHVYTEQQQYSIAIQMYRSCIERFS-MNQNTEVLLYLARAYFKDG 736


>gi|160892479|ref|ZP_02073270.1| hypothetical protein CLOL250_00007 [Clostridium sp. L2-50]
 gi|156865849|gb|EDO59280.1| hypothetical protein CLOL250_00007 [Clostridium sp. L2-50]
          Length = 654

 Score = 36.2 bits (83), Expect = 4.3,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 30/94 (31%), Gaps = 12/94 (12%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQRE-----VYEKAVLFLKEQNFSKAYEYFNQCSRD 86
            C L G ++         +  D +   E      Y  AV  +   ++  A + F +    
Sbjct: 368 GCALEGEKKYDEAIQAFTAAGDYQDAAEKIKECYYNDAVDKMAAGDYINAKDLFVKSE-- 425

Query: 87  FPFAGVARKS---LLMSAFVQYSAGKYQQAASLG 117
             +   A K+   L + A    S   Y +A    
Sbjct: 426 --YNDYADKANECLCLLAEQYVSQQDYSKAIETY 457


>gi|124009003|ref|ZP_01693688.1| tetratricopeptide repeat family protein, putative [Microscilla
           marina ATCC 23134]
 gi|123985429|gb|EAY25337.1| tetratricopeptide repeat family protein, putative [Microscilla
           marina ATCC 23134]
          Length = 748

 Score = 36.2 bits (83), Expect = 4.3,   Method: Composition-based stats.
 Identities = 12/127 (9%), Positives = 39/127 (30%), Gaps = 14/127 (11%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            +     +   +++A + F +          +  +        +   +Y +A +   + I
Sbjct: 35  SQGKAKSEAGAYAQAIQDFTKAINL---NSHSDDAYHYRGEAYFRVRRYVKALADFNKAI 91

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE-RYTNSPYVKGARF 180
              P   +  Y  +L G+    +        +  K  +   ++ ++  Y++  Y      
Sbjct: 92  EIDPRQSSASY--HLRGLVKYNL--------KLYKQAIADYNQAIKIAYSDETYFVDRAK 141

Query: 181 YVTVGRN 187
                + 
Sbjct: 142 AFLELKR 148


>gi|111120312|gb|ABH06341.1| hypothetical protein LOC55020 [Bos taurus]
          Length = 460

 Score = 36.2 bits (83), Expect = 4.3,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 47/147 (31%), Gaps = 29/147 (19%)

Query: 32  VCFLVGWERQSSRDVYLDSVTDVRYQ----------REVYEKAVLFLKEQNFSKAYEYFN 81
              L+G       D  LD+      +           +++  AV    + NF KA E + 
Sbjct: 73  GLVLIGTGSSVRLDKELDAAVKTMVEISKTQPLTHREQLHVSAVETFAKGNFPKACELWE 132

Query: 82  QCSRDFPFAGVARKSLLMSA-----FVQYSAGKYQQAASLGEEYITQYPE-SKNVDYVYY 135
           Q  +D P          M A        +  G  +Q           YP  + ++    Y
Sbjct: 133 QILQDHPTD--------MLALKFSHDAYFYLGYQEQMRDSVAR---VYPFWTPDISLSSY 181

Query: 136 LVGMSYAQMIRDVPYDQ--RATKLMLQ 160
           + G+    ++    YDQ  +  K  L 
Sbjct: 182 VKGIYSFGLMETNLYDQAKKLAKEALA 208


>gi|51598455|ref|YP_072643.1| hypothetical protein BG0193 [Borrelia garinii PBi]
 gi|51573026|gb|AAU07051.1| conserved hypothetical protein [Borrelia garinii PBi]
          Length = 379

 Score = 36.2 bits (83), Expect = 4.3,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 71/212 (33%), Gaps = 36/212 (16%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           K+ N+ KA  Y+ +C    P       +L        +   Y++A  + EEY+   PE+ 
Sbjct: 70  KKNNYDKAIVYYQRCLVKHPNNNY---ALFGLGDCYRNLDDYKKATDIWEEYLKYDPENI 126

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV--------KGARF 180
               V   V  SY ++        +  +   Q   +++E    + Y            + 
Sbjct: 127 T---VLTRVAASYRKL--------KNFQKSKQTYLKVMELIPENDYALVGIGHLYYDFKE 175

Query: 181 YVTVGRNQLAAKEVE-----------IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
           Y    +  L   E+            IG  Y K  E+   I  F+  L     +     A
Sbjct: 176 YKEALKYWLKMYELNQSKVDVRVLTSIGNCYRKLREFTRGIYFFKKALEI---SPSNFYA 232

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +  L + Y       EA +    I E+ P+  
Sbjct: 233 VFGLADCYRGNKDYKEALKYWLDIVEKDPKNN 264


>gi|3789905|gb|AAC67538.1| developmental protein DG1071 [Dictyostelium discoideum]
          Length = 581

 Score = 36.2 bits (83), Expect = 4.3,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 73/212 (34%), Gaps = 26/212 (12%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
           ++ ++ +A E+  +     P      A    L      Y    Y  A    E+ IT+ P+
Sbjct: 50  QQGDYYEAGEWIREVLDIQPDNQEAWALYGNLHL----YKEEWYP-AQKNFEQ-ITENPD 103

Query: 127 SKNVDYVYYLVGMSYAQM-IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
           +KN  Y    +G  Y      +    ++      Q+ +R++ +   + Y       +   
Sbjct: 104 NKNETYASLSLGNIYYNAKFSNPDKVEKYILNAEQFYNRVLTKNPTNIYAANGIGMIIAE 163

Query: 186 RNQL--AA------KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           +  L  A       +E         V +   Y+ +G +  AI  ++  L   +  +  E 
Sbjct: 164 KGNLNLAGETFLQIREASMDCIPVSVNLAHIYVSKGLFDNAIKLYEGCLKKSTSPKEIET 223

Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260
            +  L + Y       ++++ +      YP  
Sbjct: 224 IIMYLAKVYFDANRFYDSKQTLKKAIHMYPHN 255


>gi|62182120|ref|YP_218537.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|62129753|gb|AAX67456.1| putative TPR-repeat-containing protein [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|322716609|gb|EFZ08180.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
          Length = 1180

 Score = 36.2 bits (83), Expect = 4.3,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     E  +++A E   +     P +        
Sbjct: 466 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 522

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156
             +   + AG++ QA +       Q P      Y Y  YL G            D    +
Sbjct: 523 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 569

Query: 157 LMLQYMSRIVERYTNSPY 174
             L +++ +      S +
Sbjct: 570 AALAHLNTL----PTSQW 583


>gi|52425829|ref|YP_088966.1| NrfG protein [Mannheimia succiniciproducens MBEL55E]
 gi|52307881|gb|AAU38381.1| NrfG protein [Mannheimia succiniciproducens MBEL55E]
          Length = 255

 Score = 36.2 bits (83), Expect = 4.3,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 47/158 (29%), Gaps = 22/158 (13%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQR-----EVYEKAVLFLKEQ--NF 73
           K AL +    A+    G     S                     +Y + +   ++    +
Sbjct: 7   KKALFLSLIFALGGCSGLPMSDSESFVAKEKLYHSTNNYNGLISLYREQLKTTEDNSVRY 66

Query: 74  SKAYEYFNQ------CSRDFP----FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
             A  Y+ +           P         + + ++          Y +A S     I++
Sbjct: 67  KLALTYYQKGDSQSSLDYLQPLLNEQNLYFQSATILQIRNLIQLQNYNEAISSASMLISK 126

Query: 124 YPESKNVDYVYYLVGMSYAQM--IRDVPYDQRATKLML 159
           YP +      Y L G++ AQ+   ++   D  + +   
Sbjct: 127 YPHNSE---AYNLRGIANAQLGKYKNAEQDINSARNRF 161


>gi|14626032|emb|CAC44018.1| BcsC protein [Salmonella typhimurium]
          Length = 1053

 Score = 36.2 bits (83), Expect = 4.3,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     E  +++A E   +     P +        
Sbjct: 339 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 395

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156
             +   + AG++ QA +       Q P      Y Y  YL G            D    +
Sbjct: 396 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 442

Query: 157 LMLQYMSRIVERYTNSPY 174
             L +++ +      S +
Sbjct: 443 AALAHLNTL----PTSQW 456


>gi|305665752|ref|YP_003862039.1| TPR domain-containing protein [Maribacter sp. HTCC2170]
 gi|88710516|gb|EAR02748.1| TPR domain protein [Maribacter sp. HTCC2170]
          Length = 851

 Score = 36.2 bits (83), Expect = 4.3,   Method: Composition-based stats.
 Identities = 43/265 (16%), Positives = 89/265 (33%), Gaps = 56/265 (21%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY------EKAVLFLKEQNF 73
           YK  LT    +A   L     +    +  +          +Y      E+    L   ++
Sbjct: 5   YKIILTAV--LATLILSACSTKKDAFLNRNWHAMNTKFNTLYNGDIAFEQGREELNS-SY 61

Query: 74  SKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP------ 125
               +Y+      R      V     L S     +   +  A     + I ++       
Sbjct: 62  QD--DYWEVLPIERL----EVTENIKLDSED---NNPNFIIAEEKATKAIQKHSMDINEE 112

Query: 126 -ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
             +   D  + L+G +         +DQR     L+  + I+++Y  S  +  A  +   
Sbjct: 113 ERNPMTDEAFLLLGKARY-------FDQRYM-PALEAFNYILKKYYESDKLNEANIWREK 164

Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL--ANYSDAEHAEEAMARLVEAYVALAL 242
              +L  +E+              AI   + ++   N  D E+A +A A + +AY+ L +
Sbjct: 165 VNIRLENEEL--------------AIKNLKRLMKFENLKDQEYA-DARAMMAQAYINLNV 209

Query: 243 MDEAREVVSLI----QERYPQGYWA 263
            D A + + +     ++   +G + 
Sbjct: 210 PDTAIQHLKVASYYTKKNPEKGRYY 234


>gi|298375300|ref|ZP_06985257.1| TPR domain protein [Bacteroides sp. 3_1_19]
 gi|298267800|gb|EFI09456.1| TPR domain protein [Bacteroides sp. 3_1_19]
          Length = 681

 Score = 36.2 bits (83), Expect = 4.3,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 71/225 (31%), Gaps = 52/225 (23%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCS 84
           +  ++AV F+   +   +   + D +T        Y  +  ++L++ +  KA   +N+  
Sbjct: 101 MLVNMAVAFIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAI 160

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL-VGMSYAQ 143
              P+   A  +    A + Y    Y+ A +   E +            YY+  G+   Q
Sbjct: 161 EMDPY--YAP-AYGNRAILHYQMDDYKDALADLNEALRLDTRESG----YYINRGLVRYQ 213

Query: 144 MIR----DVPYDQ----------------------RATKLMLQYMSRIVERYTNSPYVKG 177
           M         YDQ                            ++    ++++  ++     
Sbjct: 214 MNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIEDFDVVIQQEPDN----- 268

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
              Y+      L   E          G+Y  A+  + +VL  Y  
Sbjct: 269 ---YMAYYNRALLRFE---------TGDYRGAVQDYDVVLKQYPT 301


>gi|293373139|ref|ZP_06619503.1| hypothetical protein CUY_4844 [Bacteroides ovatus SD CMC 3f]
 gi|292631910|gb|EFF50524.1| hypothetical protein CUY_4844 [Bacteroides ovatus SD CMC 3f]
          Length = 467

 Score = 36.2 bits (83), Expect = 4.3,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 25/66 (37%), Gaps = 5/66 (7%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSD--AEHAEEAMARLVEAYVALALMDEAREVVS 251
             I ++Y    E  +AI   + +L  Y +         M  + E Y  L   D+A   + 
Sbjct: 91  FFISQFY---NEPDSAIKYGKEILEKYQEELNSSVPSIMYFMAEDYATLGHYDKASAFLH 147

Query: 252 LIQERY 257
            + E Y
Sbjct: 148 SLNEAY 153


>gi|189045280|sp|Q64375|SC65_RAT RecName: Full=Synaptonemal complex protein SC65; AltName:
           Full=Leprecan-like protein 4
          Length = 414

 Score = 36.2 bits (83), Expect = 4.3,   Method: Composition-based stats.
 Identities = 7/39 (17%), Positives = 19/39 (48%), Gaps = 1/39 (2%)

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVD-YVYYLVGM 139
           +  + A + ++A +    ++ + P+ +    Y+ Y  GM
Sbjct: 127 YAHFKANRLEKAVAAAYTFLQRNPKHELTAKYLNYYRGM 165


>gi|115746650|ref|XP_783511.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 503

 Score = 36.2 bits (83), Expect = 4.3,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 49/160 (30%), Gaps = 24/160 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKS 96
              +S++V  +   +   +R    +A+  + E N  +A + F +     P +    A+++
Sbjct: 156 MGDTSKEVTDEMQDEANSKR---SEAMAAVSEGNIEEAIKIFTEAIEINPHSALLHAKRA 212

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
                       K   A    ++ I   P+S     VY   G ++              +
Sbjct: 213 S-----CFVRLNKPNAAIRDCDKGIDLNPDS---AQVYKWRGKAH--------RLLGHWE 256

Query: 157 LMLQYMSRIVER-YTNSPY--VKGARFYVTVGRNQLAAKE 193
              + +    +  Y  S Y  +K                E
Sbjct: 257 EAFRDLQMACKLDYDESAYEMLKEVEPRAKKIVEHKRKYE 296


>gi|94967940|ref|YP_589988.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94549990|gb|ABF39914.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
           Ellin345]
          Length = 515

 Score = 36.2 bits (83), Expect = 4.3,   Method: Composition-based stats.
 Identities = 21/158 (13%), Positives = 49/158 (31%), Gaps = 19/158 (12%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
           ++S+        D +    +++ A    +   + +A  Y  +C    P      + LL  
Sbjct: 249 EASKLFQQALQLDPKSFDLLFDGARFSGQHNRWDEAVGYLQKCDEVNPDRP---EVLLKL 305

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
                   + ++A S+     +  P   N     Y++  +  +            +    
Sbjct: 306 TLAYLKTRRREKAVSVARRLASVSPNDPN---AQYILAFALVEN--------ELWETAEP 354

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
              + VE+         A   + +G   L   E++  R
Sbjct: 355 MARKAVEQNPK-----DANSQLLMGIIHLNKGELDAAR 387


>gi|6324580|ref|NP_014649.1| Sgt2p [Saccharomyces cerevisiae S288c]
 gi|74676529|sp|Q12118|SGT2_YEAST RecName: Full=Small glutamine-rich tetratricopeptide
           repeat-containing protein 2; AltName: Full=SGT/UBP;
           AltName: Full=Viral protein U-binding protein
 gi|1151003|gb|AAC49487.1| hypothetical protein UNF346 [Saccharomyces cerevisiae]
 gi|1420100|emb|CAA99195.1| unnamed protein product [Saccharomyces cerevisiae]
 gi|151945636|gb|EDN63877.1| small glutamine-rich tetratricopeptide repeat-containing protein
           [Saccharomyces cerevisiae YJM789]
 gi|190407348|gb|EDV10615.1| small glutamine-rich tetratricopeptide repeat-containing protein 2
           [Saccharomyces cerevisiae RM11-1a]
 gi|256273998|gb|EEU08914.1| Sgt2p [Saccharomyces cerevisiae JAY291]
 gi|259149491|emb|CAY86295.1| Sgt2p [Saccharomyces cerevisiae EC1118]
 gi|285814896|tpg|DAA10789.1| TPA: Sgt2p [Saccharomyces cerevisiae S288c]
 gi|323303065|gb|EGA56868.1| Sgt2p [Saccharomyces cerevisiae FostersB]
 gi|323307123|gb|EGA60406.1| Sgt2p [Saccharomyces cerevisiae FostersO]
 gi|323335705|gb|EGA76988.1| Sgt2p [Saccharomyces cerevisiae Vin13]
          Length = 346

 Score = 36.2 bits (83), Expect = 4.3,   Method: Composition-based stats.
 Identities = 17/139 (12%), Positives = 40/139 (28%), Gaps = 20/139 (14%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF 102
           ++  D         ++  +    +  +++  A   + +  +  P      A ++      
Sbjct: 90  NIPEDDAETKAKAEDLKMQGNKAMANKDYELAINKYTEAIKVLPTNAIYYANRAA----- 144

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
              S  +Y QA    E  I+  P         Y  G      +    Y Q   +  L+  
Sbjct: 145 AHSSLKEYDQAVKDAESAISIDPS--------YFRG---YSRLGFAKYAQGKPEEALEAY 193

Query: 163 SRIVERYTNSPYVKGARFY 181
            ++++          A   
Sbjct: 194 KKVLDI--EGDNATEAMKR 210


>gi|149914335|ref|ZP_01902866.1| Tetratricopeptide TPR_2 [Roseobacter sp. AzwK-3b]
 gi|149811854|gb|EDM71687.1| Tetratricopeptide TPR_2 [Roseobacter sp. AzwK-3b]
          Length = 190

 Score = 36.2 bits (83), Expect = 4.4,   Method: Composition-based stats.
 Identities = 10/72 (13%), Positives = 24/72 (33%), Gaps = 3/72 (4%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           Y +E+ ++ +      ++  A + F       P    A       AF+ +    +  A  
Sbjct: 72  YAQELLDEGMSRRNIYDYDGAMKAFEALIAYCP--DYAE-GYNQRAFIHFLREDFSAALP 128

Query: 116 LGEEYITQYPES 127
             ++ +   P  
Sbjct: 129 DLDQTLALSPRH 140


>gi|126660379|ref|ZP_01731491.1| peptidase, M48B family protein [Cyanothece sp. CCY0110]
 gi|126618352|gb|EAZ89109.1| peptidase, M48B family protein [Cyanothece sp. CCY0110]
          Length = 672

 Score = 36.2 bits (83), Expect = 4.4,   Method: Composition-based stats.
 Identities = 10/62 (16%), Positives = 28/62 (45%), Gaps = 2/62 (3%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASL 116
           ++  + +  L++Q +S+A        +++P   +    + L+  A      G+  +A +L
Sbjct: 4   DLLNEGLKALQQQQYSQAVSLLGNFCQNYPDRNSDCYLQGLIALARAYRGNGQQDKAITL 63

Query: 117 GE 118
            +
Sbjct: 64  AQ 65


>gi|325507817|gb|ADZ19453.1| Serine/threonine protein kinase fused to TPR repeats domain
           [Clostridium acetobutylicum EA 2018]
          Length = 640

 Score = 36.2 bits (83), Expect = 4.4,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 39/111 (35%), Gaps = 22/111 (19%)

Query: 61  YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y   +    +QN  KA EYF     ++        K+ +         G+Y Q+      
Sbjct: 309 YNNIIENGSKQNGDKAVEYFKQAVDKN----SSNPKAYIKIIDTYLENGEYDQSID---- 360

Query: 120 YITQYPESKNVD-----YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
           +I     +K  +      + + +GM+Y         D  +     QY ++I
Sbjct: 361 FIETNLNNKQSELLKDNELLFKIGMAYF--------DDESYAKAYQYFNKI 403


>gi|156552647|ref|XP_001603324.1| PREDICTED: similar to protein phosphatase-5 [Nasonia vitripennis]
          Length = 490

 Score = 36.2 bits (83), Expect = 4.4,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 51/174 (29%), Gaps = 45/174 (25%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-----FAGVA 93
              +  +  + S  D+    +  EKA  F K QN+ +A   + +     P     +    
Sbjct: 2   SENAVEEPRVPSPEDIAEAEKYKEKANEFFKNQNYDEAVALYTKAIDLNPSVAIYYG--- 58

Query: 94  RKSLLMSAFVQ-------YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
                  +F         Y+     +A  L   Y+            YY    +   +  
Sbjct: 59  -----NRSFAFLKTECFGYALRDASKAIELDRNYLK----------GYYRRAAANMSL-- 101

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG---RNQLA-AKEVEI 196
                    KL L+    +++   N      A+   T       +LA  K + +
Sbjct: 102 ------GKFKLALKDYEAVMKARPNDK---DAKAKFTECNKIVKKLAFEKAIAV 146


>gi|87121301|ref|ZP_01077191.1| TPR domain protein [Marinomonas sp. MED121]
 gi|86163458|gb|EAQ64733.1| TPR domain protein [Marinomonas sp. MED121]
          Length = 579

 Score = 36.2 bits (83), Expect = 4.4,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 46/144 (31%), Gaps = 33/144 (22%)

Query: 13  EAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN 72
               + LY+F   +  SI +  L   ++  +  +   S  D        +KA   + + +
Sbjct: 312 PFLFWLLYQFRAGVMLSIFILVLPIAQKADASPLDWFSTPD--------QKAQKLVDQGD 363

Query: 73  FSKAYEYFNQCS----RDFPFAGV--ARKSLLM----------SAF----VQYSAGKYQQ 112
           +  A   F          +       A +  L            A+        AG  + 
Sbjct: 364 WENAQPLFENPKWQAASQYALGNYEAAAQ-QLEDLNKQNNSSSLAYNKGNSLALAGNLEA 422

Query: 113 AASLGEEYITQYPE----SKNVDY 132
           A +  E+ +   P+     +N+DY
Sbjct: 423 AITAYEDALNLNPDFKEAQENLDY 446


>gi|67923375|ref|ZP_00516856.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
 gi|67854800|gb|EAM50078.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
          Length = 176

 Score = 36.2 bits (83), Expect = 4.4,   Method: Composition-based stats.
 Identities = 22/143 (15%), Positives = 48/143 (33%), Gaps = 24/143 (16%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQC----SRDFPFAGVARKSLLMSA--FVQYS 106
           +     E YE A L+L ++ + +A     +      +  P      K+L+ +A  F  +S
Sbjct: 48  EKGTAEEYYELASLYLDKKLYVQAVNLLQKGLKTGKKLEPEN----KALMYNAMGFAYFS 103

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
             +   A    ++ I  YP+        Y++ ++      +            +   +  
Sbjct: 104 QEQLDLAIRNYKDAIKLYPD--------YVIALNNLGNAYEKKQMISKAVEAYEETLKF- 154

Query: 167 ERYTNSPYVKGARFYVTVGRNQL 189
                    K A+    + R +L
Sbjct: 155 -----DEDNKIAKRRADLLRKRL 172


>gi|157384200|gb|ABV49451.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 222 [Homo sapiens]
          Length = 770

 Score = 36.2 bits (83), Expect = 4.4,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|329896152|ref|ZP_08271365.1| AcrB/AcrD/AcrF family protein [gamma proteobacterium IMCC3088]
 gi|328921971|gb|EGG29336.1| AcrB/AcrD/AcrF family protein [gamma proteobacterium IMCC3088]
          Length = 1033

 Score = 36.2 bits (83), Expect = 4.4,   Method: Composition-based stats.
 Identities = 12/93 (12%), Positives = 31/93 (33%), Gaps = 20/93 (21%)

Query: 99  MSAFVQYSA------GKYQQAASLGEEYITQYPESKNVD-----------YVYYLV--GM 139
              ++Q          +    A   + ++ Q+P+ + +D           Y  Y    G+
Sbjct: 558 DQIYIQVKLPNGRSIDETLATAKAMDAFVRQHPQVRRIDWTVGESAPPFYYNMYRKMDGV 617

Query: 140 SYAQMIRDVPYDQRATKLMLQYMS-RIVERYTN 171
           S       +  D + T   ++ +  ++   + N
Sbjct: 618 STWAEALVLTRDPKKTNAAIRELQGQLDHAFPN 650


>gi|303245631|ref|ZP_07331914.1| N-acetylmuramoyl-L-alanine amidase [Desulfovibrio fructosovorans
           JJ]
 gi|302492894|gb|EFL52759.1| N-acetylmuramoyl-L-alanine amidase [Desulfovibrio fructosovorans
           JJ]
          Length = 627

 Score = 36.2 bits (83), Expect = 4.4,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 28/80 (35%), Gaps = 4/80 (5%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS-AGKYQ 111
           +     E+   A     + ++  A   + + ++ +P    +  +LL  A +      K  
Sbjct: 88  EAWTNAEL---AERSYLDADWEAAASLYARVAKAYPRHAWSDDALLRRADILAEHLKKPD 144

Query: 112 QAASLGEEYITQYPESKNVD 131
            A +     +  +P+    D
Sbjct: 145 AAKADLRRILRDHPKGDMAD 164


>gi|225444762|ref|XP_002279485.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 1064

 Score = 36.2 bits (83), Expect = 4.4,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 79/253 (31%), Gaps = 77/253 (30%)

Query: 63  KAVLFLKEQNFSKAYEYFNQC----SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           K  L L + +  +A+  F         + P       +LL  A V+++ G+Y  +  L +
Sbjct: 134 KGQLLLAKGDVEQAFAAFKIVLDGDRDNVP-------ALLGQACVEFNRGRYSDSLDLYK 186

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
             +  YP+         +  +    ++     D    +  ++ M R  E Y    Y   A
Sbjct: 187 RALQVYPDCPAALDPENVEALVALGIMDLHTNDASGIRKGMEKMQRAFEIYP---YCAMA 243

Query: 179 RFYVT---------VGRNQLAAKEVEI---------------------------GRYYL- 201
             Y+              QL    + +                           G YY+ 
Sbjct: 244 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 303

Query: 202 -----------------------KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
                                  K G++ +++  F+ VL  Y +     EA+  L   YV
Sbjct: 304 SVKESNKPHDFVLPYYGLGQVQLKLGDFRSSLSNFEKVLEVYPE---NCEALKALGHIYV 360

Query: 239 ALALMDEAREVVS 251
            L   ++A+E + 
Sbjct: 361 QLGQTEKAQEYLR 373


>gi|195572170|ref|XP_002104069.1| GD18641 [Drosophila simulans]
 gi|194199996|gb|EDX13572.1| GD18641 [Drosophila simulans]
          Length = 520

 Score = 36.2 bits (83), Expect = 4.4,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 39/140 (27%), Gaps = 25/140 (17%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKY 110
           D     +   +    LK + FSKA + + +     P +    A +SL            +
Sbjct: 45  DFAAAEQYKNQGNEMLKTKEFSKAIDMYTKAIELHPNSAIYYANRSL-----AHLRQESF 99

Query: 111 QQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
             A   G   +   P      Y+  YY    ++  +           K  L     + + 
Sbjct: 100 GFALQDGVSAVKADP-----AYLKGYYRRAAAHMSL--------GKFKQALCDFEFVAKC 146

Query: 169 YTNSPYVKGARFYVTVGRNQ 188
             N      A+   T     
Sbjct: 147 RPNDK---DAKLKFTECNKI 163


>gi|186681165|ref|YP_001864361.1| hypothetical protein Npun_R0666 [Nostoc punctiforme PCC 73102]
 gi|186463617|gb|ACC79418.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102]
          Length = 532

 Score = 36.2 bits (83), Expect = 4.4,   Method: Composition-based stats.
 Identities = 15/133 (11%), Positives = 35/133 (26%), Gaps = 26/133 (19%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            +A    + +   +A   +       P +  A  +      V ++ GK  +A +  ++ +
Sbjct: 171 NEADRLREAKKLEEAVVKYKAALSLDPNSVYAHNA---LGVVLHTQGKLSEAIAAYQKAL 227

Query: 122 TQYPESKNV----------------DYVYYLVGMSYAQMIRDVP-------YDQRATKLM 158
              P   N                     Y   +       D         +DQ      
Sbjct: 228 QIDPNYVNAHCNLGKALHTQGKLSEAMAAYQRALRLDPNDADTHCNLGIALHDQGKLSEA 287

Query: 159 LQYMSRIVERYTN 171
           +    + ++   N
Sbjct: 288 IAAYQKALQIDPN 300


>gi|160941961|ref|ZP_02089284.1| hypothetical protein CLOBOL_06853 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435125|gb|EDP12892.1| hypothetical protein CLOBOL_06853 [Clostridium bolteae ATCC
           BAA-613]
          Length = 352

 Score = 36.2 bits (83), Expect = 4.4,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 28/75 (37%), Gaps = 4/75 (5%)

Query: 62  EKAVLFLKEQNFSKAYEYFN-QCSRDFPFAG-VARKSLLMSAFVQYSAGKYQQAASLGEE 119
            + +  L+  +++ A   F+    +    A    R  LL  A  ++    Y  A    + 
Sbjct: 81  AEGIEKLEAGDYAGAIGSFDTALEKSGKGAEDFNRDVLLYRADAEFLLKDYNAAIHTYDL 140

Query: 120 YITQYPESKNVDYVY 134
            +   P++    Y+Y
Sbjct: 141 LLEMKPDTPE--YMY 153


>gi|153869026|ref|ZP_01998727.1| Tetratricopeptide TPR_2 [Beggiatoa sp. PS]
 gi|152074416|gb|EDN71273.1| Tetratricopeptide TPR_2 [Beggiatoa sp. PS]
          Length = 621

 Score = 36.2 bits (83), Expect = 4.4,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 72/228 (31%), Gaps = 34/228 (14%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQ-------CSRDFPFAGVARKSLLMSAFVQYSAGKY 110
            ++Y   +      N+  A + + Q                V  K L+        + +Y
Sbjct: 42  SQIYMSGLKAYNIANYPTAIKKWEQGLNLTRLIKYRQEDGQVIAKFLVSIGVAYKKSNQY 101

Query: 111 QQAASLGEE----YITQYPESK--------NVDYV---YYLVGMSYAQMIRDVPYDQRAT 155
           Q+A    ++    Y     + +         V Y     Y   ++Y Q    +       
Sbjct: 102 QKALIYFQQSLKIYRKINDKHEIKKHLLIIGVTYYKLRQYQKSLNYYQQSLKIYRKIGDR 161

Query: 156 KLMLQYMSRIVERYTN-SPYVKGARFYVTVG-RNQLAAKEVEIGRY-------YLKRGEY 206
           +  +  + +I   Y N   Y K   +Y      N+     + I  +       Y K G+Y
Sbjct: 162 RGEISVLYKISMIYNNLGQYKKTLSYYQQALEINRKIDDNIGIAVFLTQIGIVYTKLGQY 221

Query: 207 VAAIPRFQLVLA-NYSDAEHAEEAMARLVEA--YVALALMDEAREVVS 251
             A+  +Q +L  N    +   +++     A  Y+ L    +A +   
Sbjct: 222 QQALNYYQQILEINLKTDDEYGKSVYFNNTAVVYLELGQYQKALDYYK 269


>gi|149176894|ref|ZP_01855504.1| TPR repeat [Planctomyces maris DSM 8797]
 gi|148844331|gb|EDL58684.1| TPR repeat [Planctomyces maris DSM 8797]
          Length = 485

 Score = 36.2 bits (83), Expect = 4.4,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 55/168 (32%), Gaps = 21/168 (12%)

Query: 5   LGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKA 64
           L +AI +    A   Y  AL  F +     L   +   + +   DS+      + +  + 
Sbjct: 138 LTKAIEMDPKNAQYYYTRALF-FMTRGGAELAVKDFTKAIECKPDSL------QALNNRG 190

Query: 65  VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
           +LF       +A   F +     P +     ++    F   +  +  +A  +    +   
Sbjct: 191 LLFATTGKLKQARADFERVLEIKPDS---IDAMNNLGFALMNLNETDKALEVLNRVLQLN 247

Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           P+  N    Y   G+ + +         +     +   ++ +E   NS
Sbjct: 248 PKYLN---AYDNRGLVWQRR--------KEYDKAIADFTKAIELSPNS 284


>gi|115951841|ref|XP_001180556.1| PREDICTED: similar to KIAA0155 [Strongylocentrotus purpuratus]
          Length = 1120

 Score = 36.2 bits (83), Expect = 4.4,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 50/128 (39%), Gaps = 18/128 (14%)

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG-------ARFYVTVGRNQLAA- 191
           +  Q  RD   ++R  +  L    +++   + + Y           + Y+   R+  +  
Sbjct: 618 TLYQPTRDKEKEKRHQERALARYKQVLRSDSRNIYAANGIGCILAMKGYIREARDVFSQV 677

Query: 192 KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
           +E         + +   Y+++ +Y++AI  ++  +  +    H    ++ L  AY     
Sbjct: 678 REATADVSDVWLNLAHIYVEQKQYISAIQMYENCIKKFFKF-HNTTVLSFLARAYFKTGK 736

Query: 243 MDEAREVV 250
           + E R+ +
Sbjct: 737 LKECRQTL 744


>gi|187479239|ref|YP_787264.1| exported peptidase [Bordetella avium 197N]
 gi|115423826|emb|CAJ50377.1| putative exported peptidase [Bordetella avium 197N]
          Length = 503

 Score = 36.2 bits (83), Expect = 4.4,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 57/154 (37%), Gaps = 23/154 (14%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY-SAGKYQQAASLGEE 119
           Y  A    +     +A    +  S D   + +  +  +  A  +   + +   A +    
Sbjct: 324 YGLAYYHFQRNELDQAQALLDAASADGRRSPMMARLAIDIAAARKDRSRQLTLAEAA--- 380

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            I Q+P+++ +       G++YAQ ++D   +         Y+   ++++ N        
Sbjct: 381 -IKQWPDNRAL-------GLAYAQALQDNGRN----SDAQAYLRERIKQWGNDE--PELY 426

Query: 180 FYVTVGRNQLAAKEVEI----GRYYLKRGEYVAA 209
             +   + + A   VE      R+Y+  G Y AA
Sbjct: 427 QLLAQSQER-AGHPVEARRDMARFYVATGAYAAA 459


>gi|109474510|ref|XP_001075561.1| PREDICTED: transmembrane and tetratricopeptide repeat containing
           1-like [Rattus norvegicus]
          Length = 942

 Score = 36.2 bits (83), Expect = 4.4,   Method: Composition-based stats.
 Identities = 19/151 (12%), Positives = 44/151 (29%), Gaps = 27/151 (17%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A     +    +A  ++    + +P    A  +L              +A    +  
Sbjct: 547 YNYANFLKDQGRNKEAIYHYKTALKLYP--RHAS-ALNNLG---TLTKDMAEAKMYYQRA 600

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +  +P+        + +G        ++   Q  T+  +  +   ++   +      A  
Sbjct: 601 LQLHPQHNR---ALFNLG--------NLLKSQEKTEEAIVLLKESIKYGPD---FADAYS 646

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
            +      LA +E    R+      Y A I 
Sbjct: 647 SLASL---LAEQE----RFKEAEDVYQAGIK 670


>gi|109472802|ref|XP_342789.3| PREDICTED: transmembrane and tetratricopeptide repeat containing 1
           isoform 2 [Rattus norvegicus]
          Length = 942

 Score = 36.2 bits (83), Expect = 4.4,   Method: Composition-based stats.
 Identities = 19/151 (12%), Positives = 44/151 (29%), Gaps = 27/151 (17%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A     +    +A  ++    + +P    A  +L              +A    +  
Sbjct: 547 YNYANFLKDQGRNKEAIYHYKTALKLYP--RHAS-ALNNLG---TLTKDMAEAKMYYQRA 600

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +  +P+        + +G        ++   Q  T+  +  +   ++   +      A  
Sbjct: 601 LQLHPQHNR---ALFNLG--------NLLKSQEKTEEAIVLLKESIKYGPD---FADAYS 646

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
            +      LA +E    R+      Y A I 
Sbjct: 647 SLASL---LAEQE----RFKEAEDVYQAGIK 670


>gi|328714601|ref|XP_001947755.2| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like
           [Acyrthosiphon pisum]
          Length = 1076

 Score = 36.2 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 26/45 (57%), Gaps = 3/45 (6%)

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
             A+V Y +GK+++A S  ++ +   P+  N    ++ +GM++ +
Sbjct: 260 NLAYVYYKSGKFEKAISKYKQVLEINPDLMN---AHFYLGMTHLK 301


>gi|307245519|ref|ZP_07527606.1| UDP-N-acetylglucosamine-peptide-n- acetylglucosaminyltransferase
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|306853578|gb|EFM85796.1| UDP-N-acetylglucosamine-peptide-n- acetylglucosaminyltransferase
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
          Length = 718

 Score = 36.2 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 61/179 (34%), Gaps = 30/179 (16%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL-----KEQNFSKAYEYFNQCSRDFPFA 90
           +G + +    +      +     EVY +A + L     ++  F +A   FN  SR+    
Sbjct: 230 LGKQGKVDEAIVAYRNVNREDSAEVYVRAQINLGITLGEQGKFDEAIAAFNNVSREDSTE 289

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD--Y--VYYLVGMSYAQMIR 146
             A  + +         G+  +A         +    ++    Y  V +L+G+ +    +
Sbjct: 290 LYAI-AQVNLGITLRKQGRGDEAIVAY-----RNVNREDSAKLYVKVQFLLGLIFESQDK 343

Query: 147 DVPYDQRATKLMLQY--MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
                    +       +S  VE Y        A+ Y+ V    +  KE+ I  + + R
Sbjct: 344 -----LDEARDAFNNIRLSDSVELY------TKAQVYLKVLN--IGKKEIRISLFNIHR 389


>gi|301299258|ref|ZP_07205544.1| conserved hypothetical protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|300853102|gb|EFK80700.1| conserved hypothetical protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 295

 Score = 36.2 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 25/71 (35%), Gaps = 12/71 (16%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY----SAGKYQQA 113
            E+Y +A    K ++++KA +   +            K    + +  +        Y  A
Sbjct: 2   SELYFQAEEAYKNKDYTKARKLLEK--------EYLEKKTFRTNYFLFLVFLKIEDYIAA 53

Query: 114 ASLGEEYITQY 124
                EYI QY
Sbjct: 54  YETANEYIRQY 64


>gi|227890705|ref|ZP_04008510.1| conserved hypothetical protein [Lactobacillus salivarius ATCC
           11741]
 gi|227867643|gb|EEJ75064.1| conserved hypothetical protein [Lactobacillus salivarius ATCC
           11741]
          Length = 295

 Score = 36.2 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 25/71 (35%), Gaps = 12/71 (16%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY----SAGKYQQA 113
            E+Y +A    K ++++KA +   +            K    + +  +        Y  A
Sbjct: 2   SELYFQAEEAYKNKDYTKARKLLEK--------EYLEKKTFRTNYFLFLVFLKIEDYIAA 53

Query: 114 ASLGEEYITQY 124
                EYI QY
Sbjct: 54  YETANEYIRQY 64


>gi|197117374|ref|YP_002137801.1| ABC transporter membrane protein [Geobacter bemidjiensis Bem]
 gi|197086734|gb|ACH38005.1| ABC transporter, membrane protein [Geobacter bemidjiensis Bem]
          Length = 339

 Score = 36.2 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 10/78 (12%), Positives = 26/78 (33%), Gaps = 9/78 (11%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQC-----SRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
            +++  A   +   +   A     +           F     +S +  A +Q++      
Sbjct: 33  DQIFSDANDAMGSGDLPAAIAILQKVKPDQGDDSGAF----VRSRMQIARLQFALKDMNA 88

Query: 113 AASLGEEYITQYPESKNV 130
           A++   E +  YP++   
Sbjct: 89  ASASANEVLALYPDNSEA 106


>gi|61402551|gb|AAH91819.1| LOC553339 protein [Danio rerio]
          Length = 317

 Score = 36.2 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 22/146 (15%), Positives = 49/146 (33%), Gaps = 25/146 (17%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCS---RDFPFAGVARKSLLMS 100
           +V   S    +    + EK + F++E  +++A   F        +D+ F     +S    
Sbjct: 15  EVIGFSEAKTKRSASLVEKGIRFVQEGQYTQAVSLFTEAIKCDPKDYRF--FGNRS---- 68

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
            +      +Y  A +  E+ I   P+       YY  G +   + R             +
Sbjct: 69  -YCYCCLEQYALALADAEKSIQMAPDWPKG---YYRRGSALMGLKRYS--------EAEK 116

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGR 186
            M ++++   +      A   +   +
Sbjct: 117 AMEQVLKLDGDCE---EAVNDLLYCK 139


>gi|110632476|ref|YP_672684.1| tetratricopeptide TPR_2 [Mesorhizobium sp. BNC1]
 gi|110283460|gb|ABG61519.1| Tetratricopeptide TPR_2 [Chelativorans sp. BNC1]
          Length = 251

 Score = 36.2 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 57/180 (31%), Gaps = 27/180 (15%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
           A  + +            FL G    ++    + S   V             L   +F K
Sbjct: 4   ARSIERLLFRCMMFAGFLFLTGCSGPNTNGTSVLSQISV---------GETMLGYGDFEK 54

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
           AY   +  + D P + VA    L  A   +    Y +AA    +        ++      
Sbjct: 55  AYALLDAIAADNPHSSVAA---LGLADAYFRQKAYLKAAIHYRKAADLGARMES------ 105

Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           L+G++  ++ R+ P      +    ++  I+    NS     A   + +  +     ++ 
Sbjct: 106 LLGLARVELARNNP------QGAKVFLQEILRVSPNSLEALNA---MGIAHDLEGHHDLA 156


>gi|254499265|ref|ZP_05111941.1| hypothetical protein LDG_3320 [Legionella drancourtii LLAP12]
 gi|254351509|gb|EET10368.1| hypothetical protein LDG_3320 [Legionella drancourtii LLAP12]
          Length = 98

 Score = 36.2 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 22/63 (34%), Gaps = 3/63 (4%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS---LLMSAFVQYSAGKYQQAASLGEEY 120
           A  +L E N  +A E   +   D P    A  +   LL  A       +   A S+ E  
Sbjct: 33  AQQYLAEGNLRQATEICWKLVSDHPGTVEADAAKGILLDLADSYERNDERHMARSIYEHL 92

Query: 121 ITQ 123
           +  
Sbjct: 93  MNL 95


>gi|253741619|gb|EES98485.1| Intraflagellar transport particle protein IFT88 [Giardia
           intestinalis ATCC 50581]
          Length = 829

 Score = 36.2 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 72/223 (32%), Gaps = 32/223 (14%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAF 102
           R+       ++   + +Y   +++ K+Q +  AY  F + +   P +      ++ MSA 
Sbjct: 547 REFLKAQEINMESVQAIYNAGLVYFKQQEYKTAYSCFQKVANKLPSYGD----AIYMSAD 602

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
                 +  +A  +    +T +  +K  D   Y+        +  +  D+        Y 
Sbjct: 603 CLARMSQIDEAIQMLSNLVTVFSTAKAYDPSIYIR----LGELYSIAGDEG---QAAHYF 655

Query: 163 SRIVERYT---------NSPYVK-GARFYVTVGRNQLAAKE-------VEIGRYYLKRGE 205
                             S Y+K        V   + +  +       + +     K  +
Sbjct: 656 KEAHRLVPFSLAVINWLGSHYIKNELYEQARVCFEKASRVDTTTPKWSLAVAACLRKSRQ 715

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           Y  AI  ++ +L  +        AM  L+ +   +    EA E
Sbjct: 716 YREAIYEYKHILKRFP---ANTTAMTHLISSLNNIGQHKEADE 755


>gi|188527908|ref|YP_001910595.1| hypothetical protein HPSH_05795 [Helicobacter pylori Shi470]
 gi|188144148|gb|ACD48565.1| hypothetical protein HPSH_05795 [Helicobacter pylori Shi470]
          Length = 331

 Score = 36.2 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 62/145 (42%), Gaps = 19/145 (13%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS----RDFPFAGVARK 95
           R++     ++   D+  Q+E++++A+ FLK++++++A E          R + +   A  
Sbjct: 189 RKTQEKAKIEFDKDLSKQKEIFQEALTFLKDKSYAEARERLLWLEANSYRLY-YVRYA-- 245

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
                  V Y   KY++A    +E      ++  +  + +    S+ ++  D  Y     
Sbjct: 246 ----LGEVAYGEKKYREAIKYYKESALLNKKASYMPVLLWHTAWSFKKIKDDQNY----- 296

Query: 156 KLMLQYMSRIVERYTNSPYVKGARF 180
               ++++ +   Y +S   K A+ 
Sbjct: 297 ---YKFLNTLQHLYPSSEQAKMAKK 318


>gi|183221154|ref|YP_001839150.1| TPR repeat-containing protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189911245|ref|YP_001962800.1| serine phosphatase RsbU [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167775921|gb|ABZ94222.1| Serine phosphatase RsbU, regulator of sigma subunit [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167779576|gb|ABZ97874.1| Hypothetical protein with TRP repeats [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
          Length = 606

 Score = 36.2 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 4/63 (6%)

Query: 192 KEVEI--GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           KE+ +  G+ Y + G+Y  AI   +  L    D   A      +  AY    ++ EA+  
Sbjct: 486 KEILVFLGKMYYRDGKYKEAIRYLEEYLRTSGDNTAASH--FTMGRAYYKAGMISEAKRA 543

Query: 250 VSL 252
           + +
Sbjct: 544 LKM 546


>gi|88602736|ref|YP_502914.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
 gi|88188198|gb|ABD41195.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
          Length = 194

 Score = 36.2 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 30/102 (29%), Gaps = 31/102 (30%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFP----------FAGV-------ARKSLLM--- 99
           +Y + +  L    +++A   F    R +P          F          A   L M   
Sbjct: 53  LYYRGMCHLDAGRYAEALTDFEVLIRQYPDNIEYLFRRGFIRYKTGDIPGAISDLTMVPP 112

Query: 100 -----------SAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
                       + + Y  G Y  A    E+ ++ +P    V
Sbjct: 113 DHPDFSIRWHYLSVLYYKTGNYDAALEAIEKALSLFPTMPKV 154


>gi|48675383|ref|NP_001001598.1| prolyl 4-hydroxylase subunit alpha-3 precursor [Bos taurus]
 gi|75053350|sp|Q75UG4|P4HA3_BOVIN RecName: Full=Prolyl 4-hydroxylase subunit alpha-3; Short=4-PH
           alpha-3; AltName:
           Full=Procollagen-proline,2-oxoglutarate-4-dioxygenase
           subunit alpha-3; Flags: Precursor
 gi|47115494|dbj|BAD18888.1| Collagen prolyl 4-hydroxylase alpha III subunit [Bos taurus]
 gi|296479828|gb|DAA21943.1| prolyl 4-hydroxylase subunit alpha-3 precursor [Bos taurus]
          Length = 544

 Score = 36.2 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 11/81 (13%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDF--PFAGVA-------RKSLLMSAFVQYSAGKYQ 111
           ++   +     ++  A  +  +    F   +             +L   AF  + AG   
Sbjct: 185 FQVGKVAYDMGDYYHAIPWLEEAVSLFRGSYGEWKTEDEASLEDALDHLAFAYFQAGNVL 244

Query: 112 QAASLGEEYITQY-PESKNVD 131
            A +L  E++  Y P++K V 
Sbjct: 245 CALNLSREFL-LYSPDNKRVA 264


>gi|86140915|ref|ZP_01059474.1| TPR repeat protein [Leeuwenhoekiella blandensis MED217]
 gi|85832857|gb|EAQ51306.1| TPR repeat protein [Leeuwenhoekiella blandensis MED217]
          Length = 254

 Score = 36.2 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 46/131 (35%), Gaps = 13/131 (9%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++ +  +      KA E +           +   +L   A + YS GK+++     + Y 
Sbjct: 98  DRGLSKMHAGYLEKAKEDYYYVVHKNNNNAMMEAALYWLARIHYSQGKFEEVLKNCDRYF 157

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
           T   +   +   Y++ G +   +        R  +  ++  S  +E + N  YV+     
Sbjct: 158 TINSQDPEM---YFISGTANDML--------RNFEKAIKDYSNAIEIHPN--YVQAIANR 204

Query: 182 VTVGRNQLAAK 192
            T   N L   
Sbjct: 205 GTAKINLLTRN 215


>gi|229511278|ref|ZP_04400757.1| GGDEF family protein [Vibrio cholerae B33]
 gi|229351243|gb|EEO16184.1| GGDEF family protein [Vibrio cholerae B33]
          Length = 640

 Score = 36.2 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 72/212 (33%), Gaps = 32/212 (15%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQ-CSRDFPFAG--VARKSLLMS 100
           D+ L  + D      +Y    L +     +  A +Y N+            +  +     
Sbjct: 188 DLLLCLLPDYVDPSGIYNDVGLLMGTLGQYESALDYLNKALEYRLEQGNPLLIAQVEHSL 247

Query: 101 AFVQYSAGKYQQAASLGEEYITQY--PES--KNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
               +  G+Y+++    E+    +  P +    + YV+  +G +Y ++   V  DQ    
Sbjct: 248 GDTYFKQGRYEESILYFEQ-AKAHLTPANYLFGLAYVHLGLGKAYIELNNFVEGDQ-HLF 305

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             L+Y++          +       +      LA        +  K  +Y  AI      
Sbjct: 306 QALEYVN---------QHKDQHLQGLIYL--SLAQ-----AHF--KEQKYAQAIDYANQA 347

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           +A  S++           +AY+ LA + EA +
Sbjct: 348 VA-ISESASLPR---IKAQAYLQLAKIAEAEQ 375


>gi|224111122|ref|XP_002315755.1| predicted protein [Populus trichocarpa]
 gi|222864795|gb|EEF01926.1| predicted protein [Populus trichocarpa]
          Length = 334

 Score = 36.2 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 22/153 (14%), Positives = 47/153 (30%), Gaps = 28/153 (18%)

Query: 37  GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VAR 94
           G     S++      ++V+ +  + +K   F K  N+ KA   + Q  +  P      + 
Sbjct: 7   GSATTGSKE------SNVKEEISLKDKGNEFFKAGNYLKAAALYTQAIKLDPSNPTLYSN 60

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG--MSYAQMIRDVPYDQ 152
           ++            K  +A +  E  I   P+ +     Y+  G  +   +   D     
Sbjct: 61  RAA-----AFLQLVKLNKALADAETTIKLNPQWEKG---YFRKGCVLEGMERYDD----- 107

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
                 L      ++    S  V      ++  
Sbjct: 108 -----ALATFQIALQHNPQSTEVSRKIKRISQL 135


>gi|254503656|ref|ZP_05115807.1| tetratricopeptide repeat domain protein [Labrenzia alexandrii
           DFL-11]
 gi|222439727|gb|EEE46406.1| tetratricopeptide repeat domain protein [Labrenzia alexandrii
           DFL-11]
          Length = 277

 Score = 36.2 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 36/121 (29%), Gaps = 23/121 (19%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            + + + +      A E FN+  +  P  F   A ++L+         G+   A S    
Sbjct: 66  TRGIAYGQAGKLDNAIEDFNRALQLNPQSFQTYANRALV-----YRRMGQNDLAISDYTR 120

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            I   P   + D  Y   G  Y          Q      L   + ++     S     AR
Sbjct: 121 AINIKP---DYDVAYVGRGNIY--------RQQGNFTAALNDFNSVI-----SRDSSDAR 164

Query: 180 F 180
            
Sbjct: 165 A 165


>gi|254526134|ref|ZP_05138186.1| hypothetical protein P9202_786 [Prochlorococcus marinus str. MIT
           9202]
 gi|221537558|gb|EEE40011.1| hypothetical protein P9202_786 [Prochlorococcus marinus str. MIT
           9202]
          Length = 275

 Score = 36.2 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 28/210 (13%), Positives = 53/210 (25%), Gaps = 74/210 (35%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--------------------- 91
           D +Y+  +Y   V     +N+  A E F +     P                        
Sbjct: 25  DPKYEEVLYLSGVTKNCIKNYKGAIEDFTKLIAINPKTEDVFKNRGIAKDELGDFKGAIE 84

Query: 92  -VARKSLLM---------SAFVQYSAGKYQQAASLGEEYITQYPESKNV----------- 130
                  +              +Y    Y+ A     + I   P+S              
Sbjct: 85  DYTSAIEINPEDHLNFFFRGNTKYKLNNYEDALEDLTKTIELNPKSSLALYDRAGIKKIL 144

Query: 131 --------DY------------VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
                   DY             Y+  G        D+  D       ++  S+++    
Sbjct: 145 NDNKGAIQDYTSAIEINPTFANAYFKRG--------DLSSDLEDYASAIEDFSKVIVIDP 196

Query: 171 NSP----YVKGARFYVTVGRNQLAAKEVEI 196
           N      Y   A++ +   ++ +A  E+ I
Sbjct: 197 NYQNIYFYRGNAKYNLDDNKSAIADYEIAI 226


>gi|195330292|ref|XP_002031838.1| GM23832 [Drosophila sechellia]
 gi|194120781|gb|EDW42824.1| GM23832 [Drosophila sechellia]
          Length = 520

 Score = 36.2 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 39/140 (27%), Gaps = 25/140 (17%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKY 110
           D     +   +    LK + FSKA + + +     P +    A +SL            +
Sbjct: 45  DFAAAEQYKNQGNEMLKTKEFSKAIDMYTKAIELHPNSAIYYANRSL-----AHLRQESF 99

Query: 111 QQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
             A   G   +   P      Y+  YY    ++  +           K  L     + + 
Sbjct: 100 GFALQDGVSAVKADP-----AYLKGYYRRAAAHMSL--------GKFKQALCDFEFVAKC 146

Query: 169 YTNSPYVKGARFYVTVGRNQ 188
             N      A+   T     
Sbjct: 147 RPNDK---DAKLKFTECNKI 163


>gi|218245032|ref|YP_002370403.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC
           8801]
 gi|257058056|ref|YP_003135944.1| hypotheticalprotein [Cyanothece sp. PCC 8802]
 gi|218165510|gb|ACK64247.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8801]
 gi|256588222|gb|ACU99108.1| TPR repeat-containing protein [Cyanothece sp. PCC 8802]
          Length = 156

 Score = 36.2 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 31/71 (43%), Gaps = 7/71 (9%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASL 116
           E+ ++A   L+     KA +   +  + +P FA    R+++L      ++  +Y+++   
Sbjct: 42  ELLKRAQFLLESGEVEKAEKLLTKTIKSYPDFAEAWNRRAVL-----YFTQEQYEKSKGD 96

Query: 117 GEEYITQYPES 127
            E  +   P  
Sbjct: 97  CERVVQLVPYH 107


>gi|149714380|ref|XP_001489780.1| PREDICTED: similar to RNA polymerase II-associated protein 3 [Equus
           caballus]
          Length = 664

 Score = 36.2 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 44/141 (31%), Gaps = 17/141 (12%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D +    + EK   + K+  + +A E + +     P+  V        A   +   K+  
Sbjct: 129 DSQKALALKEKGNKYFKQGKYDEAIECYTKGMDADPYNPVLPT---NRASAYFRMKKFAV 185

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A S     I     S    Y     G +   + +         +   +   +++E   N+
Sbjct: 186 AESDCNLAIALN-RSYTKAYA--RRGAARFALQK--------LEDAKKDYEKVLELEPNN 234

Query: 173 PYVKGARFYVTVGRNQLAAKE 193
                A   +      L +KE
Sbjct: 235 ---FEATNELRKINQALTSKE 252


>gi|119595342|gb|EAW74936.1| procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline
           4-hydroxylase), alpha polypeptide III, isoform CRA_c
           [Homo sapiens]
          Length = 260

 Score = 36.2 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 28/80 (35%), Gaps = 9/80 (11%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDF--PFAGVA-------RKSLLMSAFVQYSAGKYQ 111
           ++   +     ++  A  +  +    F   +             +L   AF  + AG   
Sbjct: 45  FQVGKVAYDMGDYYHAIPWLEEAVSLFRGSYGEWKTEDEASLEDALDHLAFAYFRAGNVS 104

Query: 112 QAASLGEEYITQYPESKNVD 131
            A SL  E++   P++K + 
Sbjct: 105 CALSLSREFLLYSPDNKRMA 124


>gi|118091912|ref|XP_421249.2| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 1632

 Score = 36.2 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 36/102 (35%), Gaps = 10/102 (9%)

Query: 62   EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
             + +L+++  +++ A E F +     P      ++        Y   ++++A     + +
Sbjct: 1293 NRGLLYMELGDYANACEDFKEAVLLSPGDSQIFQA---IGTCHYRLNEFEEAVRSFNQAL 1349

Query: 122  TQYPESKNVDYVYYL-VGMSYAQ--MIRDVPYDQRATKLMLQ 160
               P S       Y+  G SY +      +   Q+     + 
Sbjct: 1350 RLEPISVEA----YIGRGNSYMKHGQEAGLEQAQKDFLKAIH 1387


>gi|19552441|ref|NP_600443.1| thioredoxin domain-containing protein [Corynebacterium glutamicum
           ATCC 13032]
 gi|62390107|ref|YP_225509.1| thioredoxin [Corynebacterium glutamicum ATCC 13032]
 gi|21323986|dbj|BAB98612.1| Thioredoxin domain-containing protein [Corynebacterium glutamicum
           ATCC 13032]
 gi|41325443|emb|CAF19923.1| PUTATIVE THIOREDOXIN [Corynebacterium glutamicum ATCC 13032]
          Length = 307

 Score = 36.2 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 8/63 (12%), Positives = 18/63 (28%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
            + G       +       D   +   ++ A   L    F +A   +       P    A
Sbjct: 147 AVGGQLEGLPEEATDGEQEDAPVEDPRFDAATDALNRGAFDEAIAVYESILAQEPNNADA 206

Query: 94  RKS 96
           +++
Sbjct: 207 KQA 209


>gi|17933746|ref|NP_524946.1| protein phosphatase D3, isoform A [Drosophila melanogaster]
 gi|24645490|ref|NP_731398.1| protein phosphatase D3, isoform B [Drosophila melanogaster]
 gi|7299242|gb|AAF54438.1| protein phosphatase D3, isoform A [Drosophila melanogaster]
 gi|9501238|emb|CAB99478.1| protein phosphatase 5 [Drosophila melanogaster]
 gi|16182816|gb|AAL13585.1| GH12714p [Drosophila melanogaster]
 gi|23170843|gb|AAN13442.1| protein phosphatase D3, isoform B [Drosophila melanogaster]
 gi|220954960|gb|ACL90023.1| PpD3-PA [synthetic construct]
          Length = 520

 Score = 36.2 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 39/140 (27%), Gaps = 25/140 (17%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKY 110
           D     +   +    LK + FSKA + + +     P +    A +SL            +
Sbjct: 45  DFAAAEQYKNQGNEMLKTKEFSKAIDMYTKAIELHPNSAIYYANRSL-----AHLRQESF 99

Query: 111 QQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
             A   G   +   P      Y+  YY    ++  +           K  L     + + 
Sbjct: 100 GFALQDGVSAVKADP-----AYLKGYYRRAAAHMSL--------GKFKQALCDFEFVAKC 146

Query: 169 YTNSPYVKGARFYVTVGRNQ 188
             N      A+   T     
Sbjct: 147 RPNDK---DAKLKFTECNKI 163


>gi|326912625|ref|XP_003202649.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP4-like
           [Meleagris gallopavo]
          Length = 442

 Score = 36.2 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 15/147 (10%), Positives = 44/147 (29%), Gaps = 31/147 (21%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRD--FPFA------------GVARKSLLMSAFVQYSA 107
           E+   + KE  + +A   + +                       +A  + L  A      
Sbjct: 268 ERGTQYFKEGKYKRAALQYKKIVSWLEHESGLSNEEDTKARSLRLA--AHLNLAMCHLKL 325

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +Y QA     + +     ++      +  G ++  +           +L      ++++
Sbjct: 326 KEYSQALENCNKALELDSSNEKG---LFRRGEAHLAVND--------FELARGDFQKVIQ 374

Query: 168 RYTNSPYVKGARFYVTVGRNQL-AAKE 193
            Y ++     A+  +   + ++    E
Sbjct: 375 LYPSNK---AAKVQLVTCQQKIREQHE 398


>gi|322613991|gb|EFY10927.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322625502|gb|EFY22328.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322629967|gb|EFY26740.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322632144|gb|EFY28895.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322636506|gb|EFY33213.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322643140|gb|EFY39714.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322644639|gb|EFY41175.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322651337|gb|EFY47721.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322652747|gb|EFY49086.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322659048|gb|EFY55300.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322663250|gb|EFY59454.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322668736|gb|EFY64889.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322674460|gb|EFY70553.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322678333|gb|EFY74394.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322682409|gb|EFY78430.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322684123|gb|EFY80129.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323192321|gb|EFZ77553.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323196251|gb|EFZ81403.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323201399|gb|EFZ86465.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323206491|gb|EFZ91452.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323212083|gb|EFZ96910.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323216988|gb|EGA01711.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323220353|gb|EGA04807.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323224400|gb|EGA08689.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323228330|gb|EGA12461.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323233403|gb|EGA17496.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323237136|gb|EGA21203.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323243649|gb|EGA27665.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323246107|gb|EGA30094.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323250887|gb|EGA34765.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323257620|gb|EGA41306.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323261827|gb|EGA45394.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323266116|gb|EGA49607.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323268660|gb|EGA52127.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
          Length = 1180

 Score = 36.2 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     E  +++A E   +     P +        
Sbjct: 466 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 522

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156
             +   + AG++ QA +       Q P      Y Y  YL G            D    +
Sbjct: 523 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 569

Query: 157 LMLQYMSRIVERYTNSPY 174
             L +++ +      S +
Sbjct: 570 AALAHLNTL----PTSQW 583


>gi|315634579|ref|ZP_07889863.1| conserved hypothetical protein [Aggregatibacter segnis ATCC 33393]
 gi|315476527|gb|EFU67275.1| conserved hypothetical protein [Aggregatibacter segnis ATCC 33393]
          Length = 183

 Score = 36.2 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 29/64 (45%), Gaps = 1/64 (1%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
              R+++ +A    +++   +A + F    R+      A ++ L  A +    G+ ++A 
Sbjct: 4   DEARQLFSQAKKLYQDEKLDEAIDIFQSIKREDSPETFA-RAQLNLALIWRKKGEQEKAI 62

Query: 115 SLGE 118
           ++ E
Sbjct: 63  AIYE 66


>gi|260060544|gb|ACX30004.1| transmembrane and tetratricopeptide repeat containing 1A [Homo
           sapiens]
          Length = 882

 Score = 36.2 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 52/155 (33%), Gaps = 30/155 (19%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP-YDQRAT 155
           LL + +       + +A    ++ +   P+   V        +S     +     +Q   
Sbjct: 756 LLSAIYS--KQENHDKALDAIDKALQLKPKDPKV--------ISELFFTKGNQLREQNLL 805

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVG-RNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
               +     V+   +      A+ ++ +G    +             +G+YV+A   ++
Sbjct: 806 DKAFESYRVAVQLNPD-----QAQAWMNMGGIQHI-------------KGKYVSARAYYE 847

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
             L    D++  +E +A+L      L  + E  + 
Sbjct: 848 RALQLVPDSKLLKENLAKLDRLEKRLQEVREKDQT 882


>gi|239610445|gb|EEQ87432.1| transcriptional corepressor Cyc8 [Ajellomyces dermatitidis ER-3]
 gi|327349127|gb|EGE77984.1| transcriptional corepressor Cyc8 [Ajellomyces dermatitidis ATCC
           18188]
          Length = 984

 Score = 36.2 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 20/143 (13%), Positives = 44/143 (30%), Gaps = 22/143 (15%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108
            D    +  Y     ++ +  + KAYE + Q        P              + Y   
Sbjct: 331 ADNSDAQSWYLLGRCYMSQAKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIN 384

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +Y+ A       I   P    +  V+Y +G +  +   +   D       L    R  + 
Sbjct: 385 QYRDALDAYSRAIRLNP---YISEVWYDLG-TLYESCNNQTND------ALDAYRRAADL 434

Query: 169 YTNSPYVKGARFYVTVGRNQLAA 191
              + ++   +  + + ++  A 
Sbjct: 435 DPTNAHI---KSRLQLLQSGQAG 454


>gi|261195576|ref|XP_002624192.1| transcriptional corepressor Cyc8 [Ajellomyces dermatitidis
           SLH14081]
 gi|239588064|gb|EEQ70707.1| transcriptional corepressor Cyc8 [Ajellomyces dermatitidis
           SLH14081]
          Length = 983

 Score = 36.2 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 20/143 (13%), Positives = 44/143 (30%), Gaps = 22/143 (15%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108
            D    +  Y     ++ +  + KAYE + Q        P              + Y   
Sbjct: 330 ADNSDAQSWYLLGRCYMSQAKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIN 383

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +Y+ A       I   P    +  V+Y +G +  +   +   D       L    R  + 
Sbjct: 384 QYRDALDAYSRAIRLNP---YISEVWYDLG-TLYESCNNQTND------ALDAYRRAADL 433

Query: 169 YTNSPYVKGARFYVTVGRNQLAA 191
              + ++   +  + + ++  A 
Sbjct: 434 DPTNAHI---KSRLQLLQSGQAG 453


>gi|229017513|ref|ZP_04174414.1| TPR repeat-containing protein [Bacillus cereus AH1273]
 gi|229023732|ref|ZP_04180221.1| TPR repeat-containing protein [Bacillus cereus AH1272]
 gi|228737529|gb|EEL88036.1| TPR repeat-containing protein [Bacillus cereus AH1272]
 gi|228743837|gb|EEL93938.1| TPR repeat-containing protein [Bacillus cereus AH1273]
          Length = 891

 Score = 36.2 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 55/159 (34%), Gaps = 19/159 (11%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAF 102
            +  D   D       Y  A    +   + +A + F Q   +         + ++   A 
Sbjct: 591 KLIKDREIDKENNEAAYLLASANFRIGKYQEAVQNFEQALANNAKGIEPYKKDAMRDLAV 650

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG-MSYAQMIRDVPYDQRATKLMLQY 161
                 ++++A  +  +  T+   +++   V YL G +S A     V  D         +
Sbjct: 651 SHMKMEEFEKAEDVIVKMSTK--TNEDKAIVSYLKGQLSTA----TVQLD-----KAESF 699

Query: 162 MSRIVERYT-NSPYVKG-ARFYVTVGRNQL---AAKEVE 195
               +++ + N+ Y    +  YV   +  L   A KE+ 
Sbjct: 700 FKEAIKQDSKNAIYTIELSNLYVLWNKTNLIDSAKKEMN 738


>gi|238496501|ref|XP_002379486.1| transcriptional corepressor Cyc8, putative [Aspergillus flavus
           NRRL3357]
 gi|220694366|gb|EED50710.1| transcriptional corepressor Cyc8, putative [Aspergillus flavus
           NRRL3357]
          Length = 869

 Score = 36.2 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 23/146 (15%), Positives = 45/146 (30%), Gaps = 28/146 (19%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108
            D    +  Y     ++ +  + KAYE + Q        P              + Y   
Sbjct: 297 ADNTDAQSWYLLGRCYMSQAKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIN 350

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSY---AQMIRDVPYDQRATKLMLQYMSRI 165
           +Y+ A       I   P    +  V+Y +G  Y      I D           L    R 
Sbjct: 351 QYRDALDAYSRAIRLNP---YISEVWYDLGTLYESCNNQISD----------ALDAYGRA 397

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAA 191
            +    + ++   +  + + ++QL+ 
Sbjct: 398 ADLDPTNVHI---KARLQLLQSQLSG 420


>gi|226500876|ref|NP_001149790.1| LOC100283417 [Zea mays]
 gi|195634685|gb|ACG36811.1| peptidyl-prolyl isomerase [Zea mays]
          Length = 553

 Score = 36.2 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 21/151 (13%), Positives = 55/151 (36%), Gaps = 26/151 (17%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQ----CSRDFPFAG-VARKSL-------LMSAFVQYSAGK 109
           E+     K   +++A + + +       D  F+    ++S        L +A  +     
Sbjct: 408 EEGNALFKSGKYARASKRYEKAAKYIEYDTSFSEDEKKQSKQLKISCNLNNAACKLKLKD 467

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y++AA L  + +    +S+NV    Y    +Y Q+           +L    + + +E  
Sbjct: 468 YKEAAKLCTKVLEL--DSQNVK-ALYRRVQAYIQLAD--------LELAEADIKKALEID 516

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
            ++      +    + + ++     +  ++Y
Sbjct: 517 PDNR---DVKLEYKILKEKIKEYNKKDAKFY 544


>gi|204928563|ref|ZP_03219762.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|204321996|gb|EDZ07194.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
          Length = 1172

 Score = 36.2 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     E  +++A E   +     P +        
Sbjct: 458 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 514

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156
             +   + AG++ QA +       Q P      Y Y  YL G            D    +
Sbjct: 515 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 561

Query: 157 LMLQYMSRIVERYTNSPY 174
             L +++ +      S +
Sbjct: 562 AALAHLNTL----PTSQW 575


>gi|198241977|ref|YP_002217576.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|197936493|gb|ACH73826.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
          Length = 1180

 Score = 36.2 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     E  +++A E   +     P +        
Sbjct: 466 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 522

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156
             +   + AG++ QA +       Q P      Y Y  YL G            D    +
Sbjct: 523 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 569

Query: 157 LMLQYMSRIVERYTNSPY 174
             L +++ +      S +
Sbjct: 570 AALAHLNTL----PTSQW 583


>gi|226530716|ref|NP_001141458.1| hypothetical protein LOC100273568 [Zea mays]
 gi|300797999|ref|NP_001178792.1| peptidyl-prolyl cis-trans isomerase FKBP4 [Rattus norvegicus]
 gi|293347093|ref|XP_001066628.2| PREDICTED: FK506 binding protein 4 [Rattus norvegicus]
 gi|261260096|sp|Q9QVC8|FKBP4_RAT RecName: Full=Peptidyl-prolyl cis-trans isomerase FKBP4;
           Short=PPIase FKBP4; AltName: Full=52 kDa FK506-binding
           protein; Short=52 kDa FKBP; Short=FKBP-52; AltName:
           Full=59 kDa immunophilin; Short=p59; AltName:
           Full=FK506-binding protein 4; Short=FKBP-4; AltName:
           Full=FKBP59; AltName: Full=HSP-binding immunophilin;
           Short=HBI; AltName: Full=Immunophilin FKBP52; AltName:
           Full=Rotamase; Contains: RecName: Full=Peptidyl-prolyl
           cis-trans isomerase FKBP4, N-terminally processed
 gi|149049321|gb|EDM01775.1| FK506 binding protein 4 [Rattus norvegicus]
 gi|194704654|gb|ACF86411.1| unknown [Zea mays]
          Length = 458

 Score = 36.2 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 35/84 (41%), Gaps = 2/84 (2%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFS 74
             +++   L    ++A+C L      ++ +    ++  D   ++ ++ +    L   +F 
Sbjct: 311 MQKVHALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFD 370

Query: 75  KAYEYFNQCSRDFPFAGVARKSLL 98
            A   F +  + +P +  A K+ L
Sbjct: 371 LARADFQKVLQLYP-SNKAAKTQL 393



 Score = 35.1 bits (80), Expect = 9.8,   Method: Composition-based stats.
 Identities = 18/146 (12%), Positives = 44/146 (30%), Gaps = 30/146 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARK-------SLLMSAFVQYSAGK 109
           E+  ++ KE  + +A   + +      +         +K       S L  A        
Sbjct: 275 ERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSGEEMQKVHALRLASHLNLAMCHLKLQA 334

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           +  A     + +     ++      +  G ++   + D                ++++ Y
Sbjct: 335 FSAAIESCNKALELDSNNEKG---LFRRGEAHL-AVNDFDL-------ARADFQKVLQLY 383

Query: 170 TNSPYVKGARFYVTVG----RNQLAA 191
            ++     A+  + V     R QLA 
Sbjct: 384 PSNK---AAKTQLAVCQQRTRRQLAR 406


>gi|126724804|ref|ZP_01740647.1| Peptidoglycan-binding domain 1 [Rhodobacterales bacterium HTCC2150]
 gi|126705968|gb|EBA05058.1| Peptidoglycan-binding domain 1 [Rhodobacterales bacterium HTCC2150]
          Length = 546

 Score = 36.2 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 32/79 (40%), Gaps = 12/79 (15%)

Query: 162 MSRIVERYTNSPYVKGARFYVTVG----RNQLAAKEVEIGRYYLKRGEYVAAIP--RFQL 215
           +   ++RY +  +   A   ++      R+++A +E  I        + +AA     +  
Sbjct: 391 LRSYLKRYPDGAFSDVANERLSAILQEKRDRVAKRERSIWD------QTLAANNLVSYNQ 444

Query: 216 VLANYSDAEHAEEAMARLV 234
            L  + +    EEA +R+ 
Sbjct: 445 YLNEFPNGSFVEEAKSRIA 463


>gi|145491839|ref|XP_001431918.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124399025|emb|CAK64520.1| unnamed protein product [Paramecium tetraurelia]
          Length = 181

 Score = 36.2 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 40/126 (31%), Gaps = 23/126 (18%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            KA   L    +++A + F Q  R +       K+             Y +A    ++ I
Sbjct: 23  NKAKEALDS--YNQAIQRFPQDERIY-----GAKAQ-----ALRLQKNYDEALKYFDKAI 70

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              PE+            S+     D   D    +  L+Y  + +  +  + +  GA+  
Sbjct: 71  QMNPENP-----------SFYAGKGDTLRDLNRYQDCLKYFDQAIHYHPENSFYYGAKGR 119

Query: 182 VTVGRN 187
             +   
Sbjct: 120 TYLIIK 125


>gi|51245807|ref|YP_065691.1| hypothetical protein DP1955 [Desulfotalea psychrophila LSv54]
 gi|50876844|emb|CAG36684.1| hypothetical protein DP1955 [Desulfotalea psychrophila LSv54]
          Length = 549

 Score = 36.2 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 34/125 (27%), Gaps = 24/125 (19%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE-KAVLFLKEQNFSKAYEYF------ 80
           F  A                     DV Y   +Y  K         +++A E        
Sbjct: 406 FVAAGNAEAALIHFDKALTLKPEAEDVPY---IYSYKGCCLRDLGRYAEAIEALQEGLLF 462

Query: 81  -NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
             +                      +   +Y+ A S  +  I   P S  +DY    VG+
Sbjct: 463 DEERPDLHNT----------LGVCFFKLEQYETAISSFKRAIELNPAS-GIDYAN--VGV 509

Query: 140 SYAQM 144
           +Y ++
Sbjct: 510 NYMRL 514


>gi|326434846|gb|EGD80416.1| hypothetical protein PTSG_11061 [Salpingoeca sp. ATCC 50818]
          Length = 850

 Score = 36.2 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 29/220 (13%), Positives = 65/220 (29%), Gaps = 35/220 (15%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D      ++   ++     N   A EYF++ +   P       +    A +        Q
Sbjct: 522 DSSCSEALFNLGLVHRDLGNLEDALEYFHRVNLLVPDTPEVVAA---IAALNEQLDDTDQ 578

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT-- 170
           A       I+  P   N         +++   + D   D+       QY       +   
Sbjct: 579 ACEWYNTLISLVPSDPN--------ALAHLGDMFDRLDDKS---QAFQYHFEGFRYFPAE 627

Query: 171 ------------NSPYVKGAR---FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
                       +S Y++ A          +       + I   + K G Y  A+  ++ 
Sbjct: 628 INTISWFGSYYIDSQYIQKAIQFFQRAVEIQPGEVKWRLMIASCHRKTGNYQRALETYKR 687

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
           +   + +     E +  L+     + L  E ++    +++
Sbjct: 688 IHTLFPE---NIECLKFLIRLCTDMGLP-EVQDYAVALKK 723


>gi|302810034|ref|XP_002986709.1| hypothetical protein SELMODRAFT_182535 [Selaginella moellendorffii]
 gi|302818096|ref|XP_002990722.1| hypothetical protein SELMODRAFT_185525 [Selaginella moellendorffii]
 gi|300141460|gb|EFJ08171.1| hypothetical protein SELMODRAFT_185525 [Selaginella moellendorffii]
 gi|300145597|gb|EFJ12272.1| hypothetical protein SELMODRAFT_182535 [Selaginella moellendorffii]
          Length = 482

 Score = 36.2 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 43/139 (30%), Gaps = 27/139 (19%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
              ++ E+A    +   FS A E +    +     P    A ++     F      +Y  
Sbjct: 9   EAEQLKEQANAAFQACKFSHARELYTRAIELDGSNPV-YWANRA-----FTNVKLEEYGT 62

Query: 113 AASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           A     + I       +  YV  YY  G +Y  +           K  L+ + ++ +   
Sbjct: 63  AIMDATKAIEL-----DRKYVKGYYRRGAAYLAL--------GKFKEGLKDLRQVCKIVP 109

Query: 171 NSPYVKGARFYVTVGRNQL 189
             P    A   +    N +
Sbjct: 110 KDP---DAMRKIRECENAI 125


>gi|269836528|ref|YP_003318756.1| ATPase AAA-2 domain-containing protein [Sphaerobacter thermophilus
           DSM 20745]
 gi|269785791|gb|ACZ37934.1| ATPase AAA-2 domain protein [Sphaerobacter thermophilus DSM 20745]
          Length = 817

 Score = 36.2 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 29/75 (38%), Gaps = 6/75 (8%)

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV---ALALMDEAREVVSLIQER 256
           Y++R    A   RFQ V       E   E +  + E Y     L + DEA    +++  R
Sbjct: 322 YIERDA--ALERRFQPVQVEEPTVEETIEILRGIRERYEEHHKLKITDEALRSAAVLASR 379

Query: 257 Y-PQGYWARYVETLV 270
           Y P  +       LV
Sbjct: 380 YVPDRFLPDKAIDLV 394


>gi|205356887|ref|ZP_02342915.2| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205325790|gb|EDZ13629.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
          Length = 1180

 Score = 36.2 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     E  +++A E   +     P +        
Sbjct: 466 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 522

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156
             +   + AG++ QA +       Q P      Y Y  YL G            D    +
Sbjct: 523 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 569

Query: 157 LMLQYMSRIVERYTNSPY 174
             L +++ +      S +
Sbjct: 570 AALAHLNTL----PTSQW 583


>gi|195873799|ref|ZP_02698986.2| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|195632376|gb|EDX50860.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
          Length = 1180

 Score = 36.2 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     E  +++A E   +     P +        
Sbjct: 466 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 522

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156
             +   + AG++ QA +       Q P      Y Y  YL G            D    +
Sbjct: 523 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 569

Query: 157 LMLQYMSRIVERYTNSPY 174
             L +++ +      S +
Sbjct: 570 AALAHLNTL----PTSQW 583


>gi|161936207|ref|YP_152593.2| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
          Length = 1180

 Score = 36.2 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     E  +++A E   +     P +        
Sbjct: 466 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 522

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156
             +   + AG++ QA +       Q P      Y Y  YL G            D    +
Sbjct: 523 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 569

Query: 157 LMLQYMSRIVERYTNSPY 174
             L +++ +      S +
Sbjct: 570 AALAHLNTL----PTSQW 583


>gi|119952992|ref|YP_945201.1| tetratricopeptide repeat family protein [Borrelia turicatae 91E135]
 gi|119861763|gb|AAX17531.1| tetratricopeptide repeat family protein [Borrelia turicatae 91E135]
          Length = 380

 Score = 36.2 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 71/212 (33%), Gaps = 36/212 (16%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           K++NF KA  Y+ +C            +L        S G Y++A  + EEY+   PE+ 
Sbjct: 70  KKRNFDKAIIYYQKCLAKHSNNNY---ALFGLGDCYRSLGDYKKATDVWEEYLKYDPEN- 125

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV--------KGARF 180
                     ++    +       +  +   Q   R++E   ++ Y            + 
Sbjct: 126 ----------ITVLTRVASSYRKLKNFQKSRQSYLRVLEFVPDNDYALVGIGHLYYDFKE 175

Query: 181 YVTVGRNQLAAKEVE-----------IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
           Y    +  L   E+            IG  Y K  E+   I  F+  L     + +   A
Sbjct: 176 YKEALKYWLRMYEINQVKIDVRVLTSIGNCYRKLKEFSKGIYFFKRALEI---SPNNFYA 232

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +  L + Y       EA +    I ++ P+  
Sbjct: 233 IFGLADCYRGSKEYHEALKYWLTIIDKDPKNN 264


>gi|88603564|ref|YP_503742.1| TPR repeat-containing protein [Methanospirillum hungatei JF-1]
 gi|88189026|gb|ABD42023.1| TPR repeat [Methanospirillum hungatei JF-1]
          Length = 245

 Score = 36.2 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 38/112 (33%), Gaps = 28/112 (25%)

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
             K++ A    E+     P  + +   Y+  G+++  +IR         +  ++     +
Sbjct: 23  NQKFEDAIHYFEKASALNPVDEEI---YFQKGLAFMNLIR--------YQEAVEAFEEAL 71

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
           +                   ++     + +G  Y   G Y  AIP F +VL 
Sbjct: 72  K-----------------LNDKDPRYWLYMGINYFFMGRYSKAIPCFNMVLE 106


>gi|73670401|ref|YP_306416.1| hypothetical protein Mbar_A2941 [Methanosarcina barkeri str.
           Fusaro]
 gi|72397563|gb|AAZ71836.1| hypothetical protein Mbar_A2941 [Methanosarcina barkeri str.
           Fusaro]
          Length = 560

 Score = 36.2 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 25/85 (29%), Gaps = 9/85 (10%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           K         + +A + +++     P    A           Y  G+Y +A    ++ I 
Sbjct: 467 KGNALYGLGRYDEALQAYDKAIAINPNYAYAWNGK---GNALYRLGRYDEALQAYDKAIA 523

Query: 123 QYPESKNV----DYVYYLVGMSYAQ 143
             P   +         Y  G+S   
Sbjct: 524 INPNYADAWNGKGNALY--GLSRYD 546


>gi|326693737|ref|ZP_08230742.1| hypothetical protein LargK3_08531 [Leuconostoc argentinum KCTC
           3773]
          Length = 309

 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 30/79 (37%), Gaps = 12/79 (15%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQYSAGK 109
               +++  +A   +K++N+  A E                 +     +      +   +
Sbjct: 8   TPEMQQLMARAQTEMKQENWHDAAETLIAV--------YEALATFEINYRLVTALFMDEQ 59

Query: 110 YQQAASLGEEYITQYPESK 128
           YQ AAS  ++++  Y ES+
Sbjct: 60  YQLAASYADDFLLNYLESE 78


>gi|320088037|emb|CBY97799.1| Cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
          Length = 1180

 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     E  +++A E   +     P +        
Sbjct: 466 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 522

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156
             +   + AG++ QA +       Q P      Y Y  YL G            D    +
Sbjct: 523 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 569

Query: 157 LMLQYMSRIVERYTNSPY 174
             L +++ +      S +
Sbjct: 570 AALAHLNTL----PTSQW 583


>gi|319899204|ref|YP_004159297.1| Tetratricopeptide repeat protein [Bartonella clarridgeiae 73]
 gi|319403168|emb|CBI76727.1| Tetratricopeptide repeat protein [Bartonella clarridgeiae 73]
          Length = 561

 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 23/207 (11%), Positives = 61/207 (29%), Gaps = 37/207 (17%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY-------QQA 113
           ++ A+   +  N  +A +      + FP         +  A +      +        QA
Sbjct: 345 FQLALTLAENGNHDEAIKLLTLLEKKFPNDRH---IFITLAAIYMQKNNFSEAIKILDQA 401

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR--------- 164
            +   ++            ++Y  G++    ++  P  +   +  L +            
Sbjct: 402 IAQITDFQRDNWR------LFYQRGIA-FNYLKQWPKAETDFRKALTFFPDQPQVLNYLA 454

Query: 165 --IVERYTNSPYVKGARFYVTVGRNQLAAKEV---EIGRYYLKRGEYVAAIPRFQLVLAN 219
             +++R      ++ +   +       +        +G  Y K  +Y  A+   +  +  
Sbjct: 455 YSLIDRD---QKLEESLNMLKKAVTLQSQNSYILDSLGWAYYKLKQYSQAVTTLETAVRL 511

Query: 220 YSDAEHAEEAMARLVEAYVALALMDEA 246
                   +    L +AY  +    EA
Sbjct: 512 QPSDPTLND---HLGDAYWQVGRKREA 535


>gi|311253794|ref|XP_003125662.1| PREDICTED: aspartyl/asparaginyl beta-hydroxylase-like [Sus scrofa]
          Length = 430

 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 25/73 (34%), Gaps = 17/73 (23%)

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           +  L     +V RY  SP   GAR+      + LA K         +R   +      + 
Sbjct: 30  EEALNAFEELVRRYPKSP---GARYGKAQCEDDLAEK---------RRSNEI-----LRR 72

Query: 216 VLANYSDAEHAEE 228
            +  Y +A    +
Sbjct: 73  AIQTYQEAASLPD 85


>gi|284111524|ref|ZP_06386539.1| hypothetical protein POR_1143 [Candidatus Poribacteria sp. WGA-A3]
 gi|283829741|gb|EFC34057.1| hypothetical protein POR_1143 [Candidatus Poribacteria sp. WGA-A3]
          Length = 224

 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 42/98 (42%), Gaps = 7/98 (7%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
           TI  S+ V  L      +S  V  +S+ +V+       +A ++L   ++ +A E      
Sbjct: 19  TIHLSLLVLCLGWCLTGTSVSVAENSIQNVQPPL---ARAKVYLAAGDYRRAVEACQMNI 75

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
              P    + +S +   +V ++   Y ++ +  +E++ 
Sbjct: 76  DQSP----SVESYVYLIYVYHALDGYLESLAERDEWVK 109


>gi|262382113|ref|ZP_06075251.1| TPR repeat-containing protein [Bacteroides sp. 2_1_33B]
 gi|262297290|gb|EEY85220.1| TPR repeat-containing protein [Bacteroides sp. 2_1_33B]
          Length = 707

 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 71/225 (31%), Gaps = 52/225 (23%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCS 84
           +  ++AV F+   +   +   + D +T        Y  +  ++L++ +  KA   +N+  
Sbjct: 127 MLVNMAVAFIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAI 186

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL-VGMSYAQ 143
              P+   A  +    A + Y    Y+ A +   E +            YY+  G+   Q
Sbjct: 187 EMDPY--YAP-AYGNRAILHYQMDDYKDALADLNEALRLDTRESG----YYINRGLVRYQ 239

Query: 144 MIR----DVPYDQ----------------------RATKLMLQYMSRIVERYTNSPYVKG 177
           M         YDQ                            ++    ++++  ++     
Sbjct: 240 MNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIEDFDVVIQQEPDN----- 294

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
              Y+      L   E          G+Y  A+  + +VL  Y  
Sbjct: 295 ---YMAYYNRALLRFE---------TGDYWGAVQDYDVVLKQYPT 327


>gi|257456228|ref|ZP_05621425.1| TPR domain protein [Treponema vincentii ATCC 35580]
 gi|257446314|gb|EEV21360.1| TPR domain protein [Treponema vincentii ATCC 35580]
          Length = 1124

 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 70/230 (30%), Gaps = 48/230 (20%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           + V  + +   R    + ++     +  NF++A   FN+ +   P               
Sbjct: 643 KKVQAELLAKKREVDTLVQQGKKAAETGNFAEAQRAFNKAAAQMPDG-----------DA 691

Query: 104 QYSAGKYQQAASLGEEYITQYPESKN---VDYVYYLV---------GMSY--AQMIRDVP 149
            ++A +Y++ A + + +    P  K     D   Y+            S+     I D  
Sbjct: 692 VFAAEQYREMADVLQGFAKTAPTHKEQSLKDAADYIKKSIASKNDDAKSHYIYAQIADS- 750

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
             Q  T L +Q +         +                 A    E+GR Y ++ +Y  A
Sbjct: 751 --QNNTALTVQELEAARRFDPQN-----------------AQYNYELGRKYFEQKKYPQA 791

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
              F+  + +    E    A   L   +  +   D A    S      P 
Sbjct: 792 RSCFEQAVKSNPQFEA---AFFNLGITHKIMNANDAALTAFSKAAALKPD 838


>gi|205354768|ref|YP_002228569.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|205274549|emb|CAR39597.1| putative polysaccharide biosynthesis protein subunit C [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|326629909|gb|EGE36252.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 1161

 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     E  +++A E   +     P +        
Sbjct: 466 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 522

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156
             +   + AG++ QA +       Q P      Y Y  YL G            D    +
Sbjct: 523 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 569

Query: 157 LMLQYMSRIVERYTNSPY 174
             L +++ +      S +
Sbjct: 570 AALAHLNTL----PTSQW 583


>gi|254410828|ref|ZP_05024606.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC
           7420]
 gi|196182183|gb|EDX77169.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC
           7420]
          Length = 369

 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 16/122 (13%), Positives = 37/122 (30%), Gaps = 21/122 (17%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
              ++F +     L      S   +      + +  RE+  +A   +   N+ +A     
Sbjct: 8   LVSSLFITGLTITLTPVAHASQPQLVSQLQPEQQRLRELLRQARDLVDAGNYPQAIA--- 64

Query: 82  QCSRDFPFAGVARKSLLM---------SAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
                       + + L            ++Q   G +++AA   ++ I   P +    Y
Sbjct: 65  ---------TYQQAANLDRDNAKIFSGIGYLQARQGNFREAARAYQQAIALEPNNAEFQY 115

Query: 133 VY 134
             
Sbjct: 116 AL 117


>gi|146093351|ref|XP_001466787.1| hypothetical protein [Leishmania infantum]
 gi|134071150|emb|CAM69835.1| conserved hypothetical protein [Leishmania infantum JPCM5]
          Length = 873

 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 12/110 (10%), Positives = 34/110 (30%), Gaps = 5/110 (4%)

Query: 9   ICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL 68
           +       + + +          +  + G    ++    L     VR   + Y + +  +
Sbjct: 31  LEEAAKSEHNVNELLSIHCLRATLAAMKGSMDVTAITAQLAPGEPVRVPVQSYLEGIAAM 90

Query: 69  KEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
              + + A         R   F      +++  A V Y   +Y+++ +  
Sbjct: 91  ARGDLTTARRRLETAVERCEGFGA----AMVCLAAVYYLTSQYEKSYAQY 136


>gi|124003389|ref|ZP_01688239.1| TPR repeat, putative [Microscilla marina ATCC 23134]
 gi|123991487|gb|EAY30918.1| TPR repeat, putative [Microscilla marina ATCC 23134]
          Length = 318

 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 48/248 (19%), Positives = 84/248 (33%), Gaps = 52/248 (20%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
            + K    + F + V       + S  D  + +         ++ K  + LK+Q + +A 
Sbjct: 2   NIQKKLCNLLFGVVVATTFCACQSSKYDQGMVN---------LFLKGNVNLKKQQYKQAI 52

Query: 78  EYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
            Y+     RD  F+ +            ++ G Y +A     + I    +S  +D  YY 
Sbjct: 53  YYYTEGIKRDSSFSEIYN----NLGIALFNMGNYSRAIHHYNKAIAL--DSVLMD-AYYN 105

Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV--KGARFYVTVGRNQLAAKEV 194
              +                  L   + +V +Y +S YV  + A  Y+ + R   A K++
Sbjct: 106 RANARFASDDLSG--------ALADYNVVVAQYQDSSYVFFRRATTYMQLKRYDDAIKDL 157

Query: 195 E--IG-----------RYY--LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +  IG           R Y   K  +Y AA    Q  +              R   AY  
Sbjct: 158 DKVIGLEPNNSDALGSRGYLLYKVKKYEAAAKDLQKAIELNK----------RQDLAYAN 207

Query: 240 LALMDEAR 247
           L L+  A+
Sbjct: 208 LGLVKAAQ 215


>gi|1915960|emb|CAA68913.1| peptidylprolyl isomerase [Triticum aestivum]
          Length = 568

 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 64/178 (35%), Gaps = 26/178 (14%)

Query: 35  LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ----CSRDFPFA 90
           LV +E++        +   +    E  ++   + K   ++KA + + +       D  F+
Sbjct: 377 LVSFEKEKESWDLKSNSEKIEAASEKKDEGNAWFKMGKYAKASKRYEKAAKYIEYDSSFS 436

Query: 91  GVARK--------SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
              +K          L +A  +     Y++A  +  + +    ES NV    Y    +Y 
Sbjct: 437 EDEKKQSKAVKISIKLNNAACKLKLKDYKEAEKICSKVLEL--ESTNVK-ALYRRAQAYT 493

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
           +++          +L    + + +E   ++  VK A       +++L        ++Y
Sbjct: 494 ELVD--------LELAELDIKKALEIDPDNREVKVAYK---ALKDKLREYNKRDAKFY 540


>gi|15899426|ref|NP_344031.1| hypothetical protein SSO2710 [Sulfolobus solfataricus P2]
 gi|284173233|ref|ZP_06387202.1| hypothetical protein Ssol98_01050 [Sulfolobus solfataricus 98/2]
 gi|13816030|gb|AAK42821.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
 gi|261601199|gb|ACX90802.1| TPR repeat-containing protein [Sulfolobus solfataricus 98/2]
          Length = 302

 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 44/115 (38%), Gaps = 20/115 (17%)

Query: 63  KAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           +  +  + + +++A E +    +          K+L   A+  ++ GKY QA     + I
Sbjct: 149 RGDILFQLKKYNEAIEEYKTNLND--------DKNLYAIAYTYFTMGKYDQALEYFNKAI 200

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
           +  PE       YY  G +   +          T      + R +E   ++PY+K
Sbjct: 201 SANPEDP-----YYYQGKAETLLF------MGRTNEAYNTIKRALEIDPDNPYIK 244


>gi|78047017|ref|YP_363192.1| hypothetical protein XCV1461 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78035447|emb|CAJ23092.1| putative membrane protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 251

 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 45/132 (34%), Gaps = 19/132 (14%)

Query: 64  AVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           A   L   ++++A E++       +         +L  A  Q+  G+ QQ     +  I 
Sbjct: 95  AETLLARGDYAQAAEHYQGALRGLY---RDDPHLMLGLAKAQFGLGQPQQTRQTLDALIA 151

Query: 123 QYPESKNVDYVYYLVG-MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
             P  ++ D      G + YA+ +         T+  L     + + Y      + AR  
Sbjct: 152 ANPSFRSHD------GHLLYARAVEGS----GDTEAALHEYETLAQGYP----GEEARVR 197

Query: 182 VTVGRNQLAAKE 193
                 ++A  +
Sbjct: 198 YAQLLQRIARND 209


>gi|15618603|ref|NP_224889.1| hypothetical protein CPn0693 [Chlamydophila pneumoniae CWL029]
 gi|15836225|ref|NP_300749.1| hypothetical protein CPj0693 [Chlamydophila pneumoniae J138]
 gi|16752347|ref|NP_444605.1| type III secretion chaperone, putative [Chlamydophila pneumoniae
           AR39]
 gi|33242051|ref|NP_876992.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           [Chlamydophila pneumoniae TW-183]
 gi|4376995|gb|AAD18832.1| TPR Repeats-CT683 hypothetical protein [Chlamydophila pneumoniae
           CWL029]
 gi|8163354|gb|AAF73621.1| type III secretion chaperone, putative [Chlamydophila pneumoniae
           AR39]
 gi|8979065|dbj|BAA98900.1| TPR repeats-CT683 hypothetical protein [Chlamydophila pneumoniae
           J138]
 gi|33236561|gb|AAP98649.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           [Chlamydophila pneumoniae TW-183]
          Length = 339

 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 71/204 (34%), Gaps = 34/204 (16%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D    + +Y KAV+  +  + +++           P      K+ +   F+   + ++ +
Sbjct: 141 DPWNPQSLYNKAVILSEMDDEAESIRLLEVAVAKNPL-YW--KAWVKLGFLLSRSKRWDK 197

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A    E  +   P   ++   +Y +G+ Y  + +        T+L L+     +      
Sbjct: 198 ATEAYERVVQLRP---DLSDGHYNLGLCYLTLDK--------TRLALKAFQEALFL---- 242

Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
              + A  +  VG   L  K++        R  Y A      + L +       E A   
Sbjct: 243 -NAEDADAHFYVGLAHLDLKQM--------REAYEAFNSALSINLEH-------ERAHYL 286

Query: 233 LVEAYVALALMDEAREVVSLIQER 256
           L   +      D+A + +  +Q++
Sbjct: 287 LGYLHHMQGETDKATKELLFLQKK 310


>gi|322500914|emb|CBZ35991.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 873

 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 12/110 (10%), Positives = 34/110 (30%), Gaps = 5/110 (4%)

Query: 9   ICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL 68
           +       + + +          +  + G    ++    L     VR   + Y + +  +
Sbjct: 31  LEEAAKSEHNVNELLSIHCLRATLAAMKGSMDVTAITAQLAPGEPVRVPVQSYLEGIAAM 90

Query: 69  KEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
              + + A         R   F      +++  A V Y   +Y+++ +  
Sbjct: 91  ARGDLTTARRRLETAVERCEGFGA----AMVCLAAVYYLTSQYEKSYAQY 136


>gi|313675474|ref|YP_004053470.1| hypothetical protein [Marivirga tractuosa DSM 4126]
 gi|312942172|gb|ADR21362.1| Tetratricopeptide TPR_1 repeat-containing protein [Marivirga
           tractuosa DSM 4126]
          Length = 1579

 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 30/85 (35%), Gaps = 6/85 (7%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
           FL     ++  D  L       Y + +  +     K++N+S +     +  +  P     
Sbjct: 836 FLQDKISEAIADYDLALAEKPDYDQALLNRGSAHYKQKNYSASIADLEKTEKKSP----- 890

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGE 118
            +   M     Y   ++++A S  E
Sbjct: 891 -EVTEMLGLAYYKTKQFEKALSNME 914


>gi|238754986|ref|ZP_04616335.1| hypothetical protein yruck0001_15380 [Yersinia ruckeri ATCC 29473]
 gi|238706845|gb|EEP99213.1| hypothetical protein yruck0001_15380 [Yersinia ruckeri ATCC 29473]
          Length = 389

 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 59/183 (32%), Gaps = 34/183 (18%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              ++    + +A + F Q   +  F   A +  L++     +   + +A  + E  +  
Sbjct: 114 GRDYMAAGLYDRAEDMFTQLIEETEFRIGALQ-QLLTI--HQATSDWLKAIEVAERLVKL 170

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
                                      D++ +++   +   +  +   S  +  A   + 
Sbjct: 171 -------------------------GKDRQRSEIA-HFYCELALQAMGSDDLDKAMNLLK 204

Query: 184 VGRNQ---LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
              N     A   +  GR ++ RG+Y  A    Q VL    D E   EA+  L + Y  L
Sbjct: 205 KAANADKDCARVSIMQGRVHIARGDYGKAAEALQQVLE--QDKEVVSEALPMLHDCYQHL 262

Query: 241 ALM 243
              
Sbjct: 263 QQP 265


>gi|229495824|ref|ZP_04389552.1| BatE, TRP domain containing protein [Porphyromonas endodontalis
           ATCC 35406]
 gi|229317398|gb|EEN83303.1| BatE, TRP domain containing protein [Porphyromonas endodontalis
           ATCC 35406]
          Length = 267

 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 16/120 (13%), Positives = 38/120 (31%), Gaps = 28/120 (23%)

Query: 17  YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
           + + +F L I   ++           +    + +  D++ Q            ++ +++A
Sbjct: 3   HPMKRFLLLICLFVSALA-----HAQNTAGVVPNEADIKAQ----------YDKEQYTQA 47

Query: 77  YEYFNQCSRDFPFAGVARKSL------LMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
            E + +         +A K++             Y  G+   A    E  +   P  K V
Sbjct: 48  IEGYRELL-------LASKAIPSAALYYNLGNAYYRNGELGWAILSYERALRLAPRDKYV 100


>gi|224122920|ref|XP_002318949.1| predicted protein [Populus trichocarpa]
 gi|222857325|gb|EEE94872.1| predicted protein [Populus trichocarpa]
          Length = 471

 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 28/92 (30%), Gaps = 10/92 (10%)

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
            +   KY++A       I   P    V Y      M+Y ++ R    D       L    
Sbjct: 91  YFKQKKYKEAIECYSRSIALSPT--AVAYAN--RAMAYLKIKRQAEDDCT---EALNLDD 143

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
           R ++ Y  S      R  +   +  +   E  
Sbjct: 144 RYIKAY--SRRAT-TRKELGKLKESIEDSEFA 172


>gi|117928458|ref|YP_873009.1| TPR repeat-containing protein [Acidothermus cellulolyticus 11B]
 gi|117648921|gb|ABK53023.1| Tetratricopeptide TPR_2 repeat protein [Acidothermus cellulolyticus
           11B]
          Length = 156

 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 35/81 (43%), Gaps = 8/81 (9%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM-SAFVQYSAGKYQQAASLGEE 119
           Y + +  L+  + + A +  ++ ++  P +    +S+L      Q+ + +Y  A    E 
Sbjct: 41  YTRGLRLLESGSAAAAEQVLHRAAQAAPGS----RSILEALGRAQFQSRRYSAARESFER 96

Query: 120 YITQYPESKNVDYVYYLVGMS 140
            +   P     DY  + +G++
Sbjct: 97  IVNANPTD---DYAQFGMGLA 114


>gi|116329260|ref|YP_798980.1| cAMP-binding protein, regulatory protein [Leptospira borgpetersenii
           serovar Hardjo-bovis L550]
 gi|116330134|ref|YP_799852.1| cAMP-binding protein, regulatory protein [Leptospira borgpetersenii
           serovar Hardjo-bovis JB197]
 gi|116122004|gb|ABJ80047.1| cAMP-binding protein, regulatory protein [Leptospira borgpetersenii
           serovar Hardjo-bovis L550]
 gi|116123823|gb|ABJ75094.1| cAMP-binding protein, regulatory protein [Leptospira borgpetersenii
           serovar Hardjo-bovis JB197]
          Length = 352

 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 16/43 (37%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
           + +   + K   +  AI  F+  L +Y    +   A   L  A
Sbjct: 133 MNVAEVFYKNNNFPHAIYAFEKYLQHYPGTTYTGRATELLELA 175


>gi|108758688|ref|YP_631542.1| transglycosylase SLT domain-containing protein [Myxococcus xanthus
           DK 1622]
 gi|108462568|gb|ABF87753.1| transglycosylase SLT domain protein [Myxococcus xanthus DK 1622]
          Length = 801

 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 10/72 (13%), Positives = 19/72 (26%), Gaps = 14/72 (19%)

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
           +   R+   + +  +                         YLK G    A+ R   +   
Sbjct: 386 ETYERLAREFPDHSFADDGL--------------FYAADLYLKTGRPKEAMARLDTLARL 431

Query: 220 YSDAEHAEEAMA 231
           Y   +   EA+ 
Sbjct: 432 YPQGDFLGEALF 443



 Score = 35.5 bits (81), Expect = 9.2,   Method: Composition-based stats.
 Identities = 9/50 (18%), Positives = 21/50 (42%)

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           ++ +   + D   A++ +    + Y+      EA   +  +   YPQG +
Sbjct: 388 YERLAREFPDHSFADDGLFYAADLYLKTGRPKEAMARLDTLARLYPQGDF 437


>gi|304321651|ref|YP_003855294.1| TPR domain protein [Parvularcula bermudensis HTCC2503]
 gi|303300553|gb|ADM10152.1| TPR domain protein [Parvularcula bermudensis HTCC2503]
          Length = 854

 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 9/56 (16%), Positives = 18/56 (32%), Gaps = 3/56 (5%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           +A   + +     A E      +       A    +++A   Y+ G    A S  +
Sbjct: 131 EAEKAVTDGKPQLALEKLEALPQK---GAYASMGKMIAARAHYALGDLLAARSAID 183


>gi|301336134|ref|NP_001180380.1| transmembrane and TPR repeat-containing protein 1 isoform 1 [Homo
           sapiens]
          Length = 882

 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 52/155 (33%), Gaps = 30/155 (19%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP-YDQRAT 155
           LL + +       + +A    ++ +   P+   V        +S     +     +Q   
Sbjct: 756 LLSAIYS--KQENHDKALDAIDKALQLKPKDPKV--------ISELFFTKGNQLREQNLL 805

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVG-RNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
               +     V+   +      A+ ++ +G    +             +G+YV+A   ++
Sbjct: 806 DKAFESYRVAVQLNPD-----QAQAWMNMGGIQHI-------------KGKYVSARAYYE 847

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
             L    D++  +E +A+L      L  + E  + 
Sbjct: 848 RALQLVPDSKLLKENLAKLDRLEKRLQEVREKDQT 882


>gi|300741344|ref|ZP_07071365.1| TPR repeat protein [Rothia dentocariosa M567]
 gi|300380529|gb|EFJ77091.1| TPR repeat protein [Rothia dentocariosa M567]
          Length = 446

 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 45/222 (20%), Positives = 73/222 (32%), Gaps = 38/222 (17%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
             + S    +Y   +    V +  +    +A E +   S D P    A  + +    V  
Sbjct: 217 QQVPSTVPDQYAMALNNLGVTYYNQGKTEQALELWETVSADIP-EQYAT-AQMNLGMVYD 274

Query: 106 SAGKYQQAASLGEEYITQYPES--KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           S GK +QA +  E      PES  +      Y +G SY +        Q      ++   
Sbjct: 275 SQGKLEQAIAAWERV----PESLPERYASAQYNIGTSYVE--------QGKPTKAVEAWE 322

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
           RI      S     A              +   G  Y ++G    A+  ++ V  +   +
Sbjct: 323 RI----PASASEPYAVA------------QYNTGLIYEEQGNIDDALVAWERVPKD--AS 364

Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
           EH  +A   +  AY  L   DEA  V        P+    +Y
Sbjct: 365 EHFYKAQFNIGGAYYKLGETDEAVAVWK----NIPESASEQY 402


>gi|254487737|ref|ZP_05100942.1| TPR-domain containing protein [Roseobacter sp. GAI101]
 gi|214044606|gb|EEB85244.1| TPR-domain containing protein [Roseobacter sp. GAI101]
          Length = 188

 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 25/73 (34%), Gaps = 7/73 (9%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLG 117
           + ++ +  L   +   A E+F   +   P FA     ++        + A  Y  A    
Sbjct: 71  LLKRGMDALAAGDTPLAIEHFTALTDHAPLFAEGYHARAQ-----AYFRADLYGPAIDDL 125

Query: 118 EEYITQYPESKNV 130
           E  +   P+  N 
Sbjct: 126 EMALALNPQQFNA 138


>gi|195376269|ref|XP_002046919.1| GJ12224 [Drosophila virilis]
 gi|194154077|gb|EDW69261.1| GJ12224 [Drosophila virilis]
          Length = 661

 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 28/69 (40%), Gaps = 8/69 (11%)

Query: 38  WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGV---- 92
             R        +SV  +    E+Y +A   ++ Q  ++A E F +     F  A +    
Sbjct: 581 CPRCRKNVSLKESVAKLIKIEELYREAAEAMQAQKTNEAIELFKEGIDAFFQIAALPHKD 640

Query: 93  ---ARKSLL 98
              A+++LL
Sbjct: 641 TLIAQQALL 649


>gi|109130369|ref|XP_001083759.1| PREDICTED: peptidyl-prolyl cis-trans isomerase D-like [Macaca
           mulatta]
          Length = 370

 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 34/82 (41%), Gaps = 2/82 (2%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKA 76
           +L   AL+   +I  C L     Q + D  L+++  D    + +Y +A  + + + + +A
Sbjct: 267 KLQPIALSCVLNIGACKLKMSNWQGAIDSCLEALEIDPSNTKALYRRAQGWQRLKEYDQA 326

Query: 77  YEYFNQCSRDFPFAGVARKSLL 98
                +     P    A ++ L
Sbjct: 327 LADLKKAQEIAP-EDKAIQAEL 347


>gi|305665349|ref|YP_003861636.1| TPR repeat-containing protein [Maribacter sp. HTCC2170]
 gi|88710104|gb|EAR02336.1| TPR repeat protein:HAT (Half-A-TPR) repeat [Maribacter sp.
           HTCC2170]
          Length = 378

 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 25/70 (35%), Gaps = 3/70 (4%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           KA++   +  + KA  +F +                  A+  Y    +++A +     I 
Sbjct: 189 KALVLFNDAAYEKAIPWFERVLELGETKKY---VYEKLAYCHYKNWDFEKAKTAHRILIE 245

Query: 123 QYPESKNVDY 132
             PE+  V Y
Sbjct: 246 MNPENPEVYY 255


>gi|291515779|emb|CBK64989.1| Tetratricopeptide repeat [Alistipes shahii WAL 8301]
          Length = 662

 Score = 36.2 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 47/139 (33%), Gaps = 17/139 (12%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D       + +A+L  +  +++ A E +++ +    ++          A V    G+ ++
Sbjct: 260 DSTNSLTYFNRAMLRTQIGDYNHALEDYDKVAL---YSPNNVLVYYNRAGVYAQLGEIER 316

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT-- 170
           A       I  YP+  N  Y+Y   G      +R++  D +  K       R +  Y   
Sbjct: 317 AVEDYTSAIKLYPDFANA-YIY--RG-----RLRELLRDPQGAKEDRSIAQRKIAEYRSR 368

Query: 171 --NSPYV--KGARFYVTVG 185
             +S Y             
Sbjct: 369 LNDSTYSIYADTTQRFDRL 387


>gi|261415308|ref|YP_003248991.1| TPR repeat-containing protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261371764|gb|ACX74509.1| TPR repeat-containing protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302326296|gb|ADL25497.1| tetratricopeptide repeat protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 341

 Score = 36.2 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 19/59 (32%), Gaps = 3/59 (5%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           ++ E+A    +   F +A   + +                  A   Y   KY +AA+  
Sbjct: 22  DLMERANALYRSGKFKQAILLYRKAEDR---GADPVAVSFNIANSYYQMDKYPEAAAAY 77


>gi|190892419|ref|YP_001978961.1| exported protein, TonB-dependent receptor [Rhizobium etli CIAT 652]
 gi|190697698|gb|ACE91783.1| putative exported protein, TonB-dependent receptor [Rhizobium etli
           CIAT 652]
          Length = 1226

 Score = 36.2 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 29/84 (34%), Gaps = 6/84 (7%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
            +++ R++      D  +   +  +   +L+     K+ E     S   P      +S L
Sbjct: 485 MKEAKREIDTAIALDPSFDIALLVRGRYYLQSGERDKSLEDLLAASTANPAHS---QSQL 541

Query: 99  MSAFVQYSAGK---YQQAASLGEE 119
           M A   Y  G     QQA    + 
Sbjct: 542 MLAAAHYEKGDRIPSQQALDNADR 565


>gi|169336957|ref|ZP_02620098.2| TPR domain protein [Clostridium botulinum C str. Eklund]
 gi|169296391|gb|EDS78524.1| TPR domain protein [Clostridium botulinum C str. Eklund]
          Length = 462

 Score = 36.2 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 32/81 (39%), Gaps = 7/81 (8%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            E  +K    L+++ + ++  Y+ +     P    A+          +   +Y++A    
Sbjct: 73  EEYRKKGNYALEKKQYRRSILYYKKILLIEPKITFAKN---KLGLAFFYNNQYEEAIIQF 129

Query: 118 EEYITQYPESK----NVDYVY 134
            E I   P++     N+ YVY
Sbjct: 130 RELIQLNPKNSIFYNNLAYVY 150


>gi|115376114|ref|ZP_01463359.1| TPR repeat protein, putative [Stigmatella aurantiaca DW4/3-1]
 gi|310821025|ref|YP_003953383.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|115366929|gb|EAU65919.1| TPR repeat protein, putative [Stigmatella aurantiaca DW4/3-1]
 gi|309394097|gb|ADO71556.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1]
          Length = 459

 Score = 36.2 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 30/232 (12%), Positives = 63/232 (27%), Gaps = 42/232 (18%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y   +  L+ + ++ A     + +   P    A +  L  A   +  G    A +     
Sbjct: 144 YRLGIAHLESEQYTAALGPLRRAAELAP-GKAAVR--LPLAKALFRTGDAPGAVAALNAV 200

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA----------------TKLMLQYMSR 164
           +   P    V        +        V + + A                 +  +     
Sbjct: 201 VRASPSPAEVATA---RALMNQIADPFVGFPKAAEGKLEEGIKLLQELDIPQQAILAFEE 257

Query: 165 IVERYTN-----------SPYVKGARFYVTVGRNQL------AAKEVEIGRYYLKRGEYV 207
           +++ Y +              +  A   V   +  +          + +G  YL R    
Sbjct: 258 LLQSYPDLAVVHALLGLAYQRLDDAGRAVDEFKQAIERAPRDGKNYLYLGELYLSRQRSD 317

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           AA   +   +         + A  RL + Y+    +  ARE   ++    P 
Sbjct: 318 AAREAYTKAVELNP---LLDAAWFRLGDLYLDRRELTAAREAFQVLTWLQPD 366


>gi|146298486|ref|YP_001193077.1| TPR repeat-containing protein [Flavobacterium johnsoniae UW101]
 gi|146152904|gb|ABQ03758.1| BatE-like protein [Flavobacterium johnsoniae UW101]
          Length = 248

 Score = 36.2 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 10/81 (12%), Positives = 28/81 (34%), Gaps = 6/81 (7%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAG 108
           ++ V + +  +EK     ++  + +A + +    ++       + + L    A   Y   
Sbjct: 11  ISQVFFAQSSFEKGNALYQKGQYQEAAQVYEDILKE----NKQQSAELYFNLANSYYKLN 66

Query: 109 KYQQAASLGEEYITQYPESKN 129
           K   +    E+ +   P    
Sbjct: 67  KVAPSIYNYEKALVLKPNDPE 87


>gi|24112679|ref|NP_707189.1| tetratricopeptide repeat protein [Shigella flexneri 2a str. 301]
 gi|24051595|gb|AAN42896.1| putative heat shock protein [Shigella flexneri 2a str. 301]
          Length = 389

 Score = 36.2 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 62/186 (33%), Gaps = 36/186 (19%)

Query: 64  AVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
              ++    + +A + FNQ     DF    + +   +  A       ++Q+A  + E  +
Sbjct: 114 GRDYMAAGLYDRAEDMFNQLTDETDFRIGALQQLLQIYQA-----TSEWQKAIDVAERLV 168

Query: 122 TQYPESKNVDYVYYL--VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
               + + V+  ++   + + +     D+       K              NS       
Sbjct: 169 KLGKDKQRVEIAHFYCELALQHM-ASDDLDRAMTLLKKGAAADK-------NS------- 213

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                     A   + +GR ++ +GEY  A+   Q V++   D E   E +  L   Y  
Sbjct: 214 ----------ARVSIMMGRVFMAKGEYAKAVESLQRVIS--QDRELVSETLEMLQTCYQQ 261

Query: 240 LALMDE 245
           L    E
Sbjct: 262 LGKTAE 267


>gi|300869662|ref|YP_003784533.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000]
 gi|300687361|gb|ADK30032.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000]
          Length = 916

 Score = 36.2 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 31/85 (36%), Gaps = 7/85 (8%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
            +++   Q+E+Y      +   ++S A    +  S    +     +  L  A   +    
Sbjct: 237 KISNASVQKELYAW-DSLIISNDYSNAIVKLDSLSN---YTKDYPEIELALAKTYFKMKN 292

Query: 110 YQQAASLGEEYITQYPESKNVDYVY 134
           Y ++  +   +I     +KN D  Y
Sbjct: 293 YNESKDMLNRFIK---NNKNFDEAY 314


>gi|297475073|ref|XP_002687765.1| PREDICTED: transmembrane and tetratricopeptide repeat containing
           1-like [Bos taurus]
 gi|296487347|gb|DAA29460.1| transmembrane and tetratricopeptide repeat containing 1-like [Bos
           taurus]
          Length = 939

 Score = 36.2 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 28/230 (12%), Positives = 59/230 (25%), Gaps = 64/230 (27%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A     +    +A  ++    + +P    A  +L              +A    +  
Sbjct: 544 YNYANFLKDQGRNREAIYHYRTALKLYP--RHAS-ALNNLG---TLTRDTTEAKMYYQRA 597

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +   P+        + +G        ++   Q   +  +  +   ++          A  
Sbjct: 598 LQLNPQHNR---ALFNLG--------NLLKSQEKKEEAITLLKDSIKYGPE---FADAYS 643

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF--------------------QLVLANY 220
            +      LA +E    R+      Y+A I +                     +  +A+Y
Sbjct: 644 SLASL---LAEQE----RFKEAEEIYLAGIKKCPDSSDLHNNYGVFLVDTGFPEKAVAHY 696

Query: 221 SD----AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
                 +     AM  L   Y +L     A E             W +  
Sbjct: 697 QQAIKLSPSHHVAMVNLGRLYRSLGDNSVAEE-------------WYKRA 733


>gi|225621139|ref|YP_002722397.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
 gi|225215959|gb|ACN84693.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
          Length = 193

 Score = 36.2 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 13/113 (11%), Positives = 38/113 (33%), Gaps = 14/113 (12%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
           +  + + +  A+  ++ + +++A +   +             +    A + Y    Y +A
Sbjct: 2   ISEENKYFYSALNNIQNKRYNEAIDDLLKVIEVDSNN---LDAYHNLARIYYDIKDYDKA 58

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
                + I  YP   +    YY     Y         D+      ++ + +++
Sbjct: 59  IDTYNKSIEIYPHDSD---AYYYRAEVYI--------DKEDYDKAIEDLEKVI 100


>gi|218904503|ref|YP_002452337.1| TPR domain protein [Bacillus cereus AH820]
 gi|218536370|gb|ACK88768.1| TPR domain protein [Bacillus cereus AH820]
          Length = 304

 Score = 36.2 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 56/151 (37%), Gaps = 36/151 (23%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
             +++K++ + +A E F +     P    + ++    A   Y+ G+ ++A    E ++  
Sbjct: 75  GDIYMKQKKWEEAKEAFQKSISIQP----SDEAYHNVAVAHYNLGELEEA---SEFFLR- 126

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
              + + DY+ Y    SY + + D+       K  L   +R                   
Sbjct: 127 --AAGDSDYIMY----SYVKCLIDLGR-TTEAKEKLDAFNR------------------- 160

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
              N L   E+ +   Y++   Y  AI  F+
Sbjct: 161 ESDNFLG--EMMVADLYVELNCYKEAIEWFE 189


>gi|126656534|ref|ZP_01727795.1| soluble lytic transglycosylase [Cyanothece sp. CCY0110]
 gi|126622220|gb|EAZ92927.1| soluble lytic transglycosylase [Cyanothece sp. CCY0110]
          Length = 727

 Score = 36.2 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 32/113 (28%), Gaps = 19/113 (16%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A   L+E     A         ++P   +    LL          + + A    +E 
Sbjct: 91  YLLANDLLEEYEGGPALRQLEGLENEYPT--LVPYILLKRGRGYELTNETELAQETWQEL 148

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
           I  YP+S       Y +G           YD              +E++   P
Sbjct: 149 IETYPDSLASAEALYQLG----------KYDASYWDQA-------IEKFPQHP 184



 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 19/162 (11%), Positives = 44/162 (27%), Gaps = 32/162 (19%)

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
            A   +    + + A   ++     P++      YY +        + V       + ++
Sbjct: 240 IADGYWEVNDFYKGAIAYKKADKT-PQN------YYRIA-----RGQQVQPPGENKETVI 287

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
               +++  +  +         +                          AI  F  ++  
Sbjct: 288 AAYRQLMFGFPKAEETALGLKRLAQL------------------SPPQTAITYFDEIIQK 329

Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +   E A EA+         L    EA +V   +  +YP   
Sbjct: 330 FP--EQAPEALLDKAALLDKLNRKAEAAKVRQTLLSKYPNSD 369


>gi|124026346|ref|YP_001015462.1| hypothetical protein NATL1_16401 [Prochlorococcus marinus str.
           NATL1A]
 gi|123961414|gb|ABM76197.1| Hypothetical protein NATL1_16401 [Prochlorococcus marinus str.
           NATL1A]
          Length = 779

 Score = 36.2 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 3/60 (5%)

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
           +    KA   + +C++ FP    ++   L  +F+ Y   + + A  + EE I   P   N
Sbjct: 70  KGENEKAIRLYKKCAKSFPNHIYSK---LNLSFLYYKLNQLEIAEKIIEEAIQLKPSMPN 126


>gi|117623540|ref|YP_852453.1| hypothetical protein APECO1_440 [Escherichia coli APEC O1]
 gi|218558270|ref|YP_002391183.1| tetratricopeptide repeat protein [Escherichia coli S88]
 gi|115512664|gb|ABJ00739.1| conserved hypothetical protein [Escherichia coli APEC O1]
 gi|218365039|emb|CAR02742.1| conserved hypothetical protein [Escherichia coli S88]
 gi|323949116|gb|EGB45008.1| TPR repeat-containing protein [Escherichia coli H252]
          Length = 389

 Score = 36.2 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 62/186 (33%), Gaps = 36/186 (19%)

Query: 64  AVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
              ++    + +A + FNQ     DF    + +   +  A       ++Q+A  + E  +
Sbjct: 114 GRDYMAAGLYDRAEDMFNQLTDETDFRIGALQQLLQIYQA-----TSEWQKAIDVAERLV 168

Query: 122 TQYPESKNVDYVYYL--VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
               + + V+  ++   + + +     D+       K              NS       
Sbjct: 169 KLGKDKQRVEIAHFYCELALQHM-ASDDLDRAMTLLKKGAAADK-------NS------- 213

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                     A   + +GR ++ +GEY  A+   Q V++   D E   E +  L   Y  
Sbjct: 214 ----------ARVSIMMGRVFMAKGEYAKAVESLQRVIS--QDRELVSETLEMLQTCYQQ 261

Query: 240 LALMDE 245
           L    E
Sbjct: 262 LGKTAE 267


>gi|91205449|ref|YP_537804.1| TPR repeat-containing protein [Rickettsia bellii RML369-C]
 gi|91068993|gb|ABE04715.1| Tetratricopeptide repeat-containing protein [Rickettsia bellii
           RML369-C]
          Length = 1136

 Score = 36.2 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 46/143 (32%), Gaps = 20/143 (13%)

Query: 115 SLGEEYITQYP-ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
              + +   YP     +  +   +G+SY         D       L Y    +E Y  + 
Sbjct: 792 EALKMFQELYPSNHSYIAALLNSIGLSY--------KDLGNPAKALIYYKGALEIY-QTL 842

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS-----DAEHAEE 228
           Y +    ++    N        IG  Y K G     +   + VL  Y      +  +   
Sbjct: 843 Y-QDNPLHIVSMLNTFN----SIGAAYYKLGNTSEGLKYLKYVLEMYKALYQNNNPYIAS 897

Query: 229 AMARLVEAYVALALMDEAREVVS 251
           A+  + EAY  L  + +  E + 
Sbjct: 898 ALNNVGEAYKGLGNISKGLEYLE 920


>gi|169774883|ref|XP_001821909.1| transcriptional corepressor Cyc8 [Aspergillus oryzae RIB40]
 gi|83769772|dbj|BAE59907.1| unnamed protein product [Aspergillus oryzae]
          Length = 869

 Score = 36.2 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 23/146 (15%), Positives = 45/146 (30%), Gaps = 28/146 (19%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108
            D    +  Y     ++ +  + KAYE + Q        P              + Y   
Sbjct: 297 ADNTDAQSWYLLGRCYMSQAKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIN 350

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSY---AQMIRDVPYDQRATKLMLQYMSRI 165
           +Y+ A       I   P    +  V+Y +G  Y      I D           L    R 
Sbjct: 351 QYRDALDAYSRAIRLNP---YISEVWYDLGTLYESCNNQISD----------ALDAYGRA 397

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAA 191
            +    + ++   +  + + ++QL+ 
Sbjct: 398 ADLDPTNVHI---KARLQLLQSQLSG 420


>gi|16766902|ref|NP_462517.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|161616676|ref|YP_001590641.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|197261926|ref|ZP_03162000.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|238910356|ref|ZP_04654193.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|269849704|sp|Q8ZLB8|BCSC_SALTY RecName: Full=Cellulose synthase operon protein C; Flags: Precursor
 gi|16422179|gb|AAL22476.1| putative TPR-repeat-containing protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|19171165|emb|CAC86196.1| putative cellulose synthase operon C protein [Salmonella
           typhimurium LT2]
 gi|161366040|gb|ABX69808.1| hypothetical protein SPAB_04493 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|197240181|gb|EDY22801.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|261248769|emb|CBG26619.1| putative polysaccharide biosynthesis protein subunit C [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267995858|gb|ACY90743.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|312914640|dbj|BAJ38614.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321226668|gb|EFX51718.1| Cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|332990467|gb|AEF09450.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 1180

 Score = 36.2 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     E  +++A E   +     P +        
Sbjct: 466 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 522

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156
             +   + AG++ QA +       Q P      Y Y  YL G            D    +
Sbjct: 523 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 569

Query: 157 LMLQYMSRIVERYTNSPY 174
             L +++ +      S +
Sbjct: 570 AALAHLNTL----PTSQW 583


>gi|320352459|ref|YP_004193798.1| TPR repeat-containing protein [Desulfobulbus propionicus DSM 2032]
 gi|320120961|gb|ADW16507.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfobulbus
           propionicus DSM 2032]
          Length = 758

 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 33/239 (13%), Positives = 80/239 (33%), Gaps = 53/239 (22%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEE 119
           + A  +L  +    A ++ ++     P     +A ++ L         GK+  A +  ++
Sbjct: 105 KTAEFYLLTKKKEDAQKHIDEVLVQAPDNKDALALQANLELV-----DGKFDAAIATVDK 159

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPY------------------------DQRAT 155
            I   P +++  Y      +S  Q                               +++  
Sbjct: 160 AIAGAP-NEDRFYAIKGRALSAKQQFPAAENAFLKALELDGKKLANHATLAAFYVERKEL 218

Query: 156 KLMLQYMSRIVERYTNS--PYVKGARFYVTVGRNQLAAKEV---------------EIGR 198
                 + ++   + +S  PY++ A   +       A + +                I  
Sbjct: 219 SKAKASLEKMAAAFPDSSQPYLQMASIELMENNPDAAEQHLTQALKVDPKNSKLKTAIAD 278

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR-EVVSLIQER 256
           +Y K+G++  A   ++  +    D +  E+A A+L   Y      D+A+ E+  ++ + 
Sbjct: 279 FYSKKGKFEQAEQLYKEAI---QDTDKPEDAEAQLANFYFDHGKFDQAKVELDKVVAKN 334


>gi|311254909|ref|XP_003125999.1| PREDICTED: tetratricopeptide repeat protein 38-like [Sus scrofa]
          Length = 469

 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 45/126 (35%), Gaps = 19/126 (15%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA- 101
           ++ V +     +  + +++  AV    + NF KA + + Q  +D P          M A 
Sbjct: 94  AKMVEISKTQPLTQREQLHVAAVETFAKGNFPKACDLWEQILQDHPTD--------MLAL 145

Query: 102 ----FVQYSAGKYQQAASLGEEYITQYPE-SKNVDYVYYLVGMSYAQMIRDVPYDQ--RA 154
                  +  G  +Q           YP  + ++    Y+ G+    ++    YD+  + 
Sbjct: 146 KFSHDAYFYLGYQEQMRDSVAR---VYPFWTPDIPLSSYVKGIYSFGLMETNFYDRAEKL 202

Query: 155 TKLMLQ 160
            K  L 
Sbjct: 203 AKEALS 208


>gi|308062401|gb|ADO04289.1| hypothetical protein HPCU_05705 [Helicobacter pylori Cuz20]
          Length = 331

 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 62/145 (42%), Gaps = 19/145 (13%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS----RDFPFAGVARK 95
           R++     ++   D+  Q+E++++A+ FLK++++++A E          R + +   A  
Sbjct: 189 RKTQEKAKIEFDKDLSKQKEIFQEALTFLKDKSYAEARERLLWLEANSYRLY-YVRYA-- 245

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
                  V Y   KY++A    +E      ++  +  + +    S+ ++  D  Y     
Sbjct: 246 ----LGEVAYGEKKYREAIKYYKESALLNKKASYMPVLLWHTAWSFKKIKDDQNY----- 296

Query: 156 KLMLQYMSRIVERYTNSPYVKGARF 180
               ++++ +   Y +S   K A+ 
Sbjct: 297 ---YKFLNTLQHLYPSSEQAKMAKK 318


>gi|290998908|ref|XP_002682022.1| predicted protein [Naegleria gruberi]
 gi|284095648|gb|EFC49278.1| predicted protein [Naegleria gruberi]
          Length = 463

 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 26/68 (38%), Gaps = 7/68 (10%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE----V 249
             IG YY    +Y  AI  +   L      E    A+ R+    + L   D+A+      
Sbjct: 209 YAIGLYYEMIKDYNKAIDHYNGALKKDQQFEA---ALERMAVCQMNLGQFDKAKSSYDLT 265

Query: 250 VSLIQERY 257
           + + ++ Y
Sbjct: 266 LQMNKQNY 273


>gi|194451942|ref|YP_002047644.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|205359078|ref|ZP_02666711.2| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|194410246|gb|ACF70465.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|205338979|gb|EDZ25743.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
          Length = 1150

 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     E  +++A E   +     P +        
Sbjct: 436 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 492

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156
             +   + AG++ QA +       Q P      Y Y  YL G            D    +
Sbjct: 493 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 539

Query: 157 LMLQYMSRIVERYTNSPY 174
             L +++ +      S +
Sbjct: 540 AALAHLNTL----PTSQW 553


>gi|149186272|ref|ZP_01864586.1| TPR domain protein [Erythrobacter sp. SD-21]
 gi|148830303|gb|EDL48740.1| TPR domain protein [Erythrobacter sp. SD-21]
          Length = 556

 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 41/141 (29%), Gaps = 34/141 (24%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSR------DFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           A+     +NF  A +   +          +     + ++   +A      G  + AAS  
Sbjct: 79  AIALTSAENFPAAIDQLERVEDACASMPRY----WSIRA--NAAR---QNGDIEGAASSY 129

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY--- 174
           +  +T  P+         L G +   ++R       A +    +  R +    +      
Sbjct: 130 DRCLTLQPDHPRA-----LHGRARVALVR-------AEEEAPAFFERALAVVPSDADLWL 177

Query: 175 ----VKGARFYVTVGRNQLAA 191
                  A   +   R+  A 
Sbjct: 178 GKAQALDAAGRLEEARDLTAQ 198


>gi|114775705|ref|ZP_01451273.1| TPR repeat protein [Mariprofundus ferrooxydans PV-1]
 gi|114553816|gb|EAU56197.1| TPR repeat protein [Mariprofundus ferrooxydans PV-1]
          Length = 259

 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 37/106 (34%), Gaps = 15/106 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
                   ++ ++ A + F Q      F      + L  A     +GK  QA +L E  I
Sbjct: 146 NLGNALSGQKKYTAAIQAFQQART---FNPDNTLAALRLADTYALSGKPLQAQALYENII 202

Query: 122 TQYPESKNVDYVYYLVGM--SYAQMIRDVPYDQRATKLMLQYMSRI 165
           +  P+++       + G+     Q  R       A +  L   SR+
Sbjct: 203 SSQPQNRAA-----VEGLVRVLIQQHR-----PNAARNALSAFSRV 238


>gi|34762717|ref|ZP_00143707.1| TETRATRICOPEPTIDE REPEAT FAMILY PROTEIN [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
 gi|27887616|gb|EAA24695.1| TETRATRICOPEPTIDE REPEAT FAMILY PROTEIN [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
          Length = 558

 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 37/122 (30%), Gaps = 25/122 (20%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN---------------FSKAYEYFNQCS 84
            +   +       +       Y +   +    N               F KA E +N+  
Sbjct: 17  SKKIEEYSKKIEKNPNDASNYYNRGNAYYNRGNTFISLEKFQEAVDDDFEKAIEDYNRAI 76

Query: 85  RDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
              P   +            V Y+  KY++A +   + I   P  K   Y +Y+ G SY 
Sbjct: 77  ELNPNNTSYY-----YNRGKVFYNLKKYKKAITDFNKAIKLNPNDKE--Y-FYIRGSSYY 128

Query: 143 QM 144
            +
Sbjct: 129 NL 130


>gi|313681894|ref|YP_004059632.1| tpr repeat-containing protein [Sulfuricurvum kujiense DSM 16994]
 gi|313154754|gb|ADR33432.1| TPR repeat-containing protein [Sulfuricurvum kujiense DSM 16994]
          Length = 292

 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 18/126 (14%), Positives = 43/126 (34%), Gaps = 13/126 (10%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           ++A     ++ +  A  YF Q   + +  +     +  M    Q+   KY++A    +E 
Sbjct: 179 KEANKLFSQKKYDDAQSYFEQMIQKKYKVSD----AYFMIGETQFERKKYKEAVLSYKES 234

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
            +    ++      Y+  +     I        AT          + ++  S   K A+ 
Sbjct: 235 AS---RNEK---ALYMPTLLLHSGISMEKTGDTATAKAF--YQATISKFGGSGASKEAQE 286

Query: 181 YVTVGR 186
            ++  +
Sbjct: 287 RLSKLK 292


>gi|301060387|ref|ZP_07201250.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
 gi|300445583|gb|EFK09485.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
          Length = 785

 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 15/125 (12%), Positives = 40/125 (32%), Gaps = 21/125 (16%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y     +++  NF +A   +++  R  P F      + +        +G  ++A    E+
Sbjct: 559 YNLGNAYMRNGNFEQAVSQYSEALRYQPDF----VNARVNLGNALARSGNPRKAILQYEK 614

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +   P+       +Y +  ++A            T+  + +   ++           A 
Sbjct: 615 ALASQPDHPG---AHYNLAGAFAAS--------GKTQKAVVHYKEVLRLQPE-----DAT 658

Query: 180 FYVTV 184
               +
Sbjct: 659 ARFQL 663



 Score = 35.9 bits (82), Expect = 6.8,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 57/185 (30%), Gaps = 34/185 (18%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
             A +   +   ++A +++ +             +    A   + AG+   A +   + +
Sbjct: 492 NLANILADQGYLNEAVKHYEKALTL---NRENANARYNLANTFFRAGRTDDAIAQYRKAL 548

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              P   ++   +Y +G +Y +            +  +   S  +    +    +     
Sbjct: 549 DIRPNDPSI---HYNLGNAYMRN--------GNFEQAVSQYSEALRYQPDFVNAR----- 592

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
                N LA           + G    AI +++  LA+  D      A   L  A+ A  
Sbjct: 593 -VNLGNALA-----------RSGNPRKAILQYEKALASQPD---HPGAHYNLAGAFAASG 637

Query: 242 LMDEA 246
              +A
Sbjct: 638 KTQKA 642


>gi|319761487|ref|YP_004125424.1| pep-cterm system tpr-repeat lipoprotein [Alicycliphilus
           denitrificans BC]
 gi|317116048|gb|ADU98536.1| PEP-CTERM system TPR-repeat lipoprotein [Alicycliphilus
           denitrificans BC]
          Length = 926

 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 54/190 (28%), Gaps = 41/190 (21%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
            + +    G    ++  +           + +Y +A+L   + +F  A E   +  R  P
Sbjct: 241 IVELLISQGKTTAAAESLQALEKAAPGRPQTLYLQAMLAYTKGDFKAAQESVQKLVRMAP 300

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM--SYAQM-- 144
            +    ++L ++       G   QA +   + +   P            G+  SY ++  
Sbjct: 301 ESA---RALELAGMTDLQLGANAQAEASLAKALQLNPG-----LAMARRGLVTSYMRLGR 352

Query: 145 -----------IRDVPYD-------------QRATKLMLQYMSRIVERYTNSPYVKGARF 180
                      I     D             Q       +Y +R      N      A  
Sbjct: 353 LDKAIATLPSDIDGNDRDPGMLGLAGQAYMLQGDVDRAQRYFARASRLVPN-----DAVM 407

Query: 181 YVTVGRNQLA 190
             ++  + LA
Sbjct: 408 RTSLAVSHLA 417


>gi|229515739|ref|ZP_04405198.1| GGDEF family protein [Vibrio cholerae TMA 21]
 gi|229347508|gb|EEO12468.1| GGDEF family protein [Vibrio cholerae TMA 21]
          Length = 640

 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 72/212 (33%), Gaps = 32/212 (15%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQ-CSRDFPFAG--VARKSLLMS 100
           D+ L  + D      +Y    L +     +  A +Y N+            +  +     
Sbjct: 188 DLLLSLLPDYVDPSGIYNDVGLLMGTLGQYVSALDYLNKALEYRLEQGNPLLIAQVEHSL 247

Query: 101 AFVQYSAGKYQQAASLGEEYITQY--PES--KNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
               +  G+Y+++    E+    +  P +    + YV+  +G +Y ++   V  DQ    
Sbjct: 248 GDTYFKQGRYEESILYFEQ-AKAHLTPANYLFGLAYVHLGLGKAYIELNNFVEGDQ-HLF 305

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             L+Y++          +       +      LA        +  K  +Y  AI      
Sbjct: 306 QALEYVN---------QHKDQHLQGLIYL--SLAQ-----AHF--KEQKYAQAIDYANQA 347

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEARE 248
           +A  S++           +AY+ LA + EA +
Sbjct: 348 VA-ISESASLPR---IKAQAYLQLAKIAEAEQ 375


>gi|226372372|gb|ACO51811.1| Cartilage-associated protein precursor [Rana catesbeiana]
          Length = 405

 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 25/70 (35%), Gaps = 7/70 (10%)

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA--TKLML 159
           +  +      +A +    Y+  +P+ + +        M+Y + + D     +   TK   
Sbjct: 158 YAYFKTDNLPKAVAAAHTYLLLHPDDEMMK-----RNMAYYKSMPDTENHIKDLETKNYE 212

Query: 160 QYMSRIVERY 169
            +  R V  Y
Sbjct: 213 NFFIRAVRAY 222


>gi|194735245|ref|YP_002116553.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|194710747|gb|ACF89968.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
          Length = 1172

 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     E  +++A E   +     P +        
Sbjct: 458 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 514

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156
             +   + AG++ QA +       Q P      Y Y  YL G            D    +
Sbjct: 515 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 561

Query: 157 LMLQYMSRIVERYTNSPY 174
             L +++ +      S +
Sbjct: 562 AALAHLNTL----PTSQW 575


>gi|300795427|ref|NP_001179690.1| transmembrane and TPR repeat-containing protein 1 [Bos taurus]
          Length = 939

 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 28/230 (12%), Positives = 59/230 (25%), Gaps = 64/230 (27%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A     +    +A  ++    + +P    A  +L              +A    +  
Sbjct: 544 YNYANFLKDQGRNREAIYHYRTALKLYP--RHAS-ALNNLG---TLTRDTTEAKMYYQRA 597

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +   P+        + +G        ++   Q   +  +  +   ++          A  
Sbjct: 598 LQLNPQHNR---ALFNLG--------NLLKSQEKKEEAITLLKDSIKYGPE---FADAYS 643

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF--------------------QLVLANY 220
            +      LA +E    R+      Y+A I +                     +  +A+Y
Sbjct: 644 SLASL---LAEQE----RFKEAEEIYLAGIKKCPDSSDLHNNYGVFLVDTGFPEKAVAHY 696

Query: 221 SD----AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
                 +     AM  L   Y +L     A E             W +  
Sbjct: 697 QQAIKLSPSHHVAMVNLGRLYRSLGDNSVAEE-------------WYKRA 733


>gi|149054218|gb|EDM06035.1| synaptonemal complex protein SC65 [Rattus norvegicus]
          Length = 443

 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 7/39 (17%), Positives = 19/39 (48%), Gaps = 1/39 (2%)

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVD-YVYYLVGM 139
           +  + A + ++A +    ++ + P+ +    Y+ Y  GM
Sbjct: 156 YAHFKANRLEKAVAAAYTFLQRNPKHELTAKYLNYYRGM 194


>gi|190337484|gb|AAI63421.1| Prkri protein [Danio rerio]
 gi|190339858|gb|AAI63418.1| Prkri protein [Danio rerio]
          Length = 502

 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 12/96 (12%), Positives = 28/96 (29%), Gaps = 10/96 (10%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA-KEVEIGRYYLKRGEYVAAI 210
           Q +T+   +    ++    +               +      E        +RG+   A+
Sbjct: 123 QGSTQEAREDFQAVLNHSPDHEEAHDQLLKADKLESLQEEAHEAH------RRGDCRIAV 176

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
              + V+     +    E+     E Y+ L    +A
Sbjct: 177 QVLEHVIEL---SPWDPESRELRAECYIQLGEPRKA 209


>gi|56963669|ref|YP_175400.1| hypothetical protein ABC1904 [Bacillus clausii KSM-K16]
 gi|56909912|dbj|BAD64439.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
          Length = 427

 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 8/96 (8%), Positives = 30/96 (31%), Gaps = 7/96 (7%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           + +  ++A  +    + + +  +Y     +      ++       ++ +++ A E     
Sbjct: 178 INVGLALAEAYGANGQFEDALLLYHQQKQNELPPNALFNFGFTAFQQGDYTVAIEQLEAV 237

Query: 84  SRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLG 117
               P   +          A    +  +Y++A    
Sbjct: 238 KTLDPDFTSVYVP-----LARAYEAEKRYEEAFETL 268


>gi|6753882|ref|NP_034349.1| peptidyl-prolyl cis-trans isomerase FKBP4 [Mus musculus]
 gi|18314334|sp|P30416|FKBP4_MOUSE RecName: Full=Peptidyl-prolyl cis-trans isomerase FKBP4;
           Short=PPIase FKBP4; AltName: Full=52 kDa FK506-binding
           protein; Short=52 kDa FKBP; Short=FKBP-52; AltName:
           Full=59 kDa immunophilin; Short=p59; AltName:
           Full=FK506-binding protein 4; Short=FKBP-4; AltName:
           Full=FKBP59; AltName: Full=HSP-binding immunophilin;
           Short=HBI; AltName: Full=Immunophilin FKBP52; AltName:
           Full=Rotamase; Contains: RecName: Full=Peptidyl-prolyl
           cis-trans isomerase FKBP4, N-terminally processed
 gi|410499|emb|CAA50231.1| p59 immunophilin [Mus musculus]
 gi|26350841|dbj|BAC39057.1| unnamed protein product [Mus musculus]
 gi|148667471|gb|EDK99887.1| FK506 binding protein 4, isoform CRA_b [Mus musculus]
          Length = 458

 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 35/84 (41%), Gaps = 2/84 (2%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFS 74
             +++   L    ++A+C L      ++ +    ++  D   ++ ++ +    L   +F 
Sbjct: 311 MQKVHALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFD 370

Query: 75  KAYEYFNQCSRDFPFAGVARKSLL 98
            A   F +  + +P +  A K+ L
Sbjct: 371 LARADFQKVLQLYP-SNKAAKTQL 393



 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 18/146 (12%), Positives = 43/146 (29%), Gaps = 30/146 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARK-------SLLMSAFVQYSAGK 109
           E+   + KE  + +A   + +      +         +K       S L  A        
Sbjct: 275 ERGTAYFKEGKYKQALLQYKKIVSWLEYESSFSGEEMQKVHALRLASHLNLAMCHLKLQA 334

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           +  A     + +     ++      +  G ++   + D                ++++ Y
Sbjct: 335 FSAAIESCNKALELDSNNEKG---LFRRGEAHL-AVNDFDL-------ARADFQKVLQLY 383

Query: 170 TNSPYVKGARFYVTVG----RNQLAA 191
            ++     A+  + V     R QLA 
Sbjct: 384 PSNK---AAKTQLAVCQQRTRRQLAR 406


>gi|86145859|ref|ZP_01064187.1| acetyltransferase, putative [Vibrio sp. MED222]
 gi|85836314|gb|EAQ54444.1| acetyltransferase, putative [Vibrio sp. MED222]
          Length = 303

 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 44/133 (33%), Gaps = 6/133 (4%)

Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
            G+   ++I     D    K  ++      E+Y  S         +    N  A   ++I
Sbjct: 131 KGLVEMELILGRTMD-TIIKQAIELRKE--EKYQESR---DLLATLLTDENYAAKAHLQI 184

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
              Y  +G+   AI  + L L+    +    +A+  L   Y +L L  EA          
Sbjct: 185 AWSYDNQGKERQAIEHYVLSLSGVLSSVERFDALFGLASTYRSLGLYAEALGYFEQTMAE 244

Query: 257 YPQGYWARYVETL 269
           YP     +    +
Sbjct: 245 YPDSIEVKPFYAM 257


>gi|163848502|ref|YP_001636546.1| protein kinase [Chloroflexus aurantiacus J-10-fl]
 gi|222526436|ref|YP_002570907.1| TPR repeat-containing serine/threonine protein kinase [Chloroflexus
           sp. Y-400-fl]
 gi|163669791|gb|ABY36157.1| protein kinase [Chloroflexus aurantiacus J-10-fl]
 gi|222450315|gb|ACM54581.1| serine/threonine protein kinase with TPR repeats [Chloroflexus sp.
           Y-400-fl]
          Length = 884

 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 51/159 (32%), Gaps = 44/159 (27%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAY---EYFN----------QCSRDFPFAGVA-RK 95
             TD   QRE+Y++A        +  A    +YF           Q    +  +  A  K
Sbjct: 742 DATDENVQRELYQQAETA-----YRAAIARDDYFGFAYNGLGWILQYQDRYAESIEAFEK 796

Query: 96  S-LLM---------SAFVQYSAGKYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQ 143
           +  L            +  + + +Y +A S+ +  I       +  Y   Y+ +G +Y +
Sbjct: 797 ALQLDNENPEIFNGLGWSLFLSDRYPEAESMFKRAIEL-----DSSYTSAYFGLGRTYEE 851

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
                   Q      L     + +   + P +  A   V
Sbjct: 852 --------QGRWDEALATFQTLKQIAPDYPGLDDAINRV 882


>gi|237737619|ref|ZP_04568100.1| tetratricopeptide TPR_4 [Fusobacterium mortiferum ATCC 9817]
 gi|229419499|gb|EEO34546.1| tetratricopeptide TPR_4 [Fusobacterium mortiferum ATCC 9817]
          Length = 191

 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 38/82 (46%), Gaps = 6/82 (7%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           E A+L   + ++S A + + +      +     +S      + Y   +Y +A    E+ +
Sbjct: 42  ELAILLYHKGDYSSAIKIYKKVVD---YKEDKAESFAFLGHLYYENEEYLKAIRYFEKAL 98

Query: 122 TQYPESKNVDYVYYLVGMSYAQ 143
              P   +V +V++L+G +Y++
Sbjct: 99  DINP---DVAFVHFLLGNAYSR 117


>gi|224585412|ref|YP_002639211.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|224469940|gb|ACN47770.1| putative TPR-repeat-containing protein [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
          Length = 1150

 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     E  +++A E   +     P +        
Sbjct: 436 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 492

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156
             +   + AG++ QA +       Q P      Y Y  YL G            D    +
Sbjct: 493 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 539

Query: 157 LMLQYMSRIVERYTNSPY 174
             L +++ +      S +
Sbjct: 540 AALAHLNTL----PTSQW 553


>gi|170579035|ref|XP_001894648.1| serine/threonine protein phosphatase 5 [Brugia malayi]
 gi|158598660|gb|EDP36514.1| serine/threonine protein phosphatase 5, putative [Brugia malayi]
          Length = 492

 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 23/149 (15%), Positives = 45/149 (30%), Gaps = 30/149 (20%)

Query: 48  LDSVTD-VRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFP-FAGVARKSLLMSAF 102
           +D +TD  +   ++ ++A  F  +Q +  A E + +          F     +S+     
Sbjct: 14  VDGITDLAQRALKIKDEANQFFHDQAYDVAIELYTKAIELDDQQALF--YGNRSM----- 66

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQ 160
                  Y  A       +   P      Y   YY    +Y  +           KL L+
Sbjct: 67  AYLKKELYGSALEDANMALKLDPG-----YSKGYYRRATAYMAL--------GKLKLALK 113

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQL 189
               I +   N+     A+      +  +
Sbjct: 114 DYDTIRKAVPNNI---DAKQKYDECQKLM 139


>gi|119485061|ref|ZP_01619446.1| putative deacetylase sulfotransferase [Lyngbya sp. PCC 8106]
 gi|119457289|gb|EAW38414.1| putative deacetylase sulfotransferase [Lyngbya sp. PCC 8106]
          Length = 599

 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 37/91 (40%), Gaps = 12/91 (13%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           + Y++A L   + N   A   +    + + +F ++              +   K+Q+A S
Sbjct: 11  QFYQQAELLFSQGNIEAAISLYQSSIELNPNFSWSYHQ------LGEAFFRLEKWQEAVS 64

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
             +  +   P   N  + YY +G + +++ +
Sbjct: 65  AYDHAVQLNP---NFSWSYYNLGNALSELQQ 92


>gi|88602877|ref|YP_503055.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
 gi|88188339|gb|ABD41336.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
          Length = 252

 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 10/67 (14%), Positives = 21/67 (31%), Gaps = 3/67 (4%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y + +       +  A  +F++  +  P      K+     +       Y  A    EE 
Sbjct: 138 YHRGLALSGRGQYDLAISHFDKILQMNPS---LEKAWSSRGYAYVMEKNYNDALDSFEEA 194

Query: 121 ITQYPES 127
           +   P +
Sbjct: 195 LKINPGN 201


>gi|42572381|ref|NP_974286.1| SPY (SPINDLY); protein N-acetylglucosaminyltransferase/ protein
           binding / transferase, transferring glycosyl groups
           [Arabidopsis thaliana]
 gi|332641540|gb|AEE75061.1| putative UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase SPINDLY [Arabidopsis
           thaliana]
          Length = 732

 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 30/87 (34%), Gaps = 7/87 (8%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           D  L        +R +Y +A   +   N + A + + +C +  P +  A ++ L++    
Sbjct: 203 DNALSCYEKAALERPMYAEAYCNMDAGNITMAIDAYEECLKIDPDSRNAGQNRLLAM--N 260

Query: 105 YSAGKYQQAASLGE-----EYITQYPE 126
           Y                   +   +P+
Sbjct: 261 YINEGLDDKLFEAHRDWGWRFTRLHPQ 287


>gi|148254358|ref|YP_001238943.1| hypothetical protein BBta_2910 [Bradyrhizobium sp. BTAi1]
 gi|146406531|gb|ABQ35037.1| hypothetical protein BBta_2910 [Bradyrhizobium sp. BTAi1]
          Length = 358

 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 57/202 (28%), Gaps = 54/202 (26%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
             +  +   L     +       ++A+   +  +   A   F++  R  P          
Sbjct: 157 PTKPPQTASLPEAPALTDAASYLKRALDRSRLGDLDGAIADFDEAVRLAP---------- 206

Query: 99  MSAFVQ-YSAGK------YQQAASLGEEYITQYPESKNVDYVYYL-VGMSYAQMIRDVPY 150
            +A +  Y A        +++A +  +  I   P +       +   G++  Q       
Sbjct: 207 RNADIYRYRARDLGRRGRWERALADYDRAIRLDPNNP----ALFHDRGLALQQ------- 255

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
            Q      L  + R V                               R Y  RG    A 
Sbjct: 256 -QGELDGALIDLDRAVRM------------------------SFSDARLYSDRGAVWLAK 290

Query: 211 PRFQLVLANYSDAEHAEEAMAR 232
            R+   LA+++ A   + A+A 
Sbjct: 291 GRYDRALADFNQALKLDPALAV 312


>gi|193068462|ref|ZP_03049424.1| cellulose synthase operon protein C [Escherichia coli E110019]
 gi|192958113|gb|EDV88554.1| cellulose synthase operon protein C [Escherichia coli E110019]
          Length = 1157

 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 77/237 (32%), Gaps = 38/237 (16%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQY-PESKNVDYVY--YLVG-------MSYAQMIRDV 148
             +   + AG+  QA       + Q+ P      Y Y  YL G       +++   I  +
Sbjct: 500 RLSQDLWQAGQRSQA-DTLMRNLAQHKPNDPEQVYAYGLYLSGHDQDRAALAH---INSL 555

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEI 196
           P  Q         +  +V R   S  V      +   G+   A             ++ +
Sbjct: 556 PRAQWN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTL 609

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
             +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 610 ADWAQQRRDYTAARAAYQNVLTLEPT---NADAILGLTEVDIAAGDTAAARSQLAKL 663



 Score = 35.9 bits (82), Expect = 5.7,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 60/210 (28%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + +  P      Y   L
Sbjct: 508 AGQRSQADTLMRNLAQHKPNDPEQVYAYGL 537


>gi|116622202|ref|YP_824358.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116225364|gb|ABJ84073.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 579

 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 31/104 (29%), Gaps = 16/104 (15%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE-SKN 129
               +A E  +      P + +  +     A V Y    ++ A    +  I   P  S  
Sbjct: 395 GRLEEAREEMSLAQELDPISSIIAR---DLARVHYYRQDFEAALDQCDHTIELNPHFSP- 450

Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
               Y+++G+   Q               +    R ++    SP
Sbjct: 451 ---AYWILGLVQEQR--------GEFDESVAAFQRAIQISPRSP 483


>gi|332703109|ref|ZP_08423197.1| diguanylate cyclase and serine/threonine protein kinase with TPR
           repeats [Desulfovibrio africanus str. Walvis Bay]
 gi|332553258|gb|EGJ50302.1| diguanylate cyclase and serine/threonine protein kinase with TPR
           repeats [Desulfovibrio africanus str. Walvis Bay]
          Length = 814

 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 54/185 (29%), Gaps = 42/185 (22%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAASLGEEYITQYPE 126
               +A   F   +   P         LM+A+         G++++A +  E  +   P 
Sbjct: 628 GRPEQALTLFEIVAAKHPE-------DLMAAYNLGTTSLRLGEFERARAAFERCLKLKPG 680

Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
                 VY     S  ++ +    D         Y+                +    +  
Sbjct: 681 H-----VY-----SLIRLGQLAERDNDLPTAGEYYLR-----------ASETKIGRILTM 719

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
             LA  ++  GR+   R          Q ++ N     +   A+  + + Y+      E 
Sbjct: 720 RHLARLDLAEGRFEEARE------NLHQALILN----PYDAMAVHLMAKLYLEAGEDPEI 769

Query: 247 REVVS 251
            E ++
Sbjct: 770 AETLA 774


>gi|307168162|gb|EFN61441.1| Tetratricopeptide repeat protein 37 [Camponotus floridanus]
          Length = 1299

 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 15/132 (11%), Positives = 40/132 (30%), Gaps = 18/132 (13%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
            +  L + + ++A +      R  P    + +S    A      G +  A    +  +  
Sbjct: 554 GLQHLDQGDATEAIKALQHVIRADPNDNHSWES---LADAYLVRGAHTSALKSYQRALQL 610

Query: 124 YPESKNVDYVYY-LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG--ARF 180
            P         Y ++ ++  +++          K   +    I+E            A+ 
Sbjct: 611 SPG------ALYPMIQLANIKLL------IGQHKEAKEDFENILENDKKYILALKGLAQA 658

Query: 181 YVTVGRNQLAAK 192
            + + +  +A  
Sbjct: 659 CLGLAKENIAKH 670


>gi|297261551|ref|XP_001098079.2| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP4 isoform 2
           [Macaca mulatta]
          Length = 459

 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 19/146 (13%), Positives = 46/146 (31%), Gaps = 30/146 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRD-----FPFAGVARKSL-------LMSAFVQYSAGK 109
           E+  ++ KE  + +A   + +            +  A+K+        L  A        
Sbjct: 275 ERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSSEEAQKAQALRLASHLNLAMCHLKLQA 334

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           +  A     + +     ++      +  G ++  +           +L      ++++ Y
Sbjct: 335 FSAAIESCNKALELDSNNEKG---LFRRGEAHLAVND--------FELARADFQKVLQLY 383

Query: 170 TNSPYVKGARFYVTVG----RNQLAA 191
            N+     A+  + V     R QLA 
Sbjct: 384 PNNK---AAKTQLAVCQQRIRRQLAR 406


>gi|205359552|ref|ZP_02830561.2| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205344384|gb|EDZ31148.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
          Length = 1150

 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     E  +++A E   +     P +        
Sbjct: 436 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 492

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156
             +   + AG++ QA +       Q P      Y Y  YL G            D    +
Sbjct: 493 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 539

Query: 157 LMLQYMSRIVERYTNSPY 174
             L +++ +      S +
Sbjct: 540 AALAHLNTL----PTSQW 553


>gi|198416412|ref|XP_002123452.1| PREDICTED: similar to tetratricopeptide repeat domain 26, partial
           [Ciona intestinalis]
          Length = 407

 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 22/63 (34%), Gaps = 9/63 (14%)

Query: 68  LKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
               N+ +A   F       ++F     A K  L  A   +    Y  A     EY+ Q+
Sbjct: 161 FMRGNYEEAINSFKHLLNLDKNFA----ALKVYL--AMCYFKLEYYDVAQDYLSEYLQQH 214

Query: 125 PES 127
           P S
Sbjct: 215 PGS 217


>gi|161505841|ref|YP_001572953.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160867188|gb|ABX23811.1| hypothetical protein SARI_04018 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 1172

 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     E  +++A E   +     P +        
Sbjct: 458 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 514

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156
             +   + AG++ QA +       Q P      Y Y  YL G            D    +
Sbjct: 515 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 561

Query: 157 LMLQYMSRIVERYTNSPY 174
             L +++ +      S +
Sbjct: 562 AALAHLNTL----PTSQW 575


>gi|197117965|ref|YP_002138392.1| lipoprotein [Geobacter bemidjiensis Bem]
 gi|197087325|gb|ACH38596.1| lipoprotein, putative [Geobacter bemidjiensis Bem]
          Length = 71

 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 22/44 (50%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
           +E+++ A    K+ N   A + + +    +P + VA+++    A
Sbjct: 24  KELFDTAQFEEKQNNREHAKQLYQEIVNKYPDSPVAKQAQERLA 67


>gi|50417750|gb|AAH77978.1| LOC446236 protein [Xenopus laevis]
          Length = 938

 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 44/278 (15%), Positives = 99/278 (35%), Gaps = 43/278 (15%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
           A L RA    E   +     ++T  +++A  +    E   S  +Y + + +     + Y 
Sbjct: 476 ASLDRAKAEAEHDEHYYNSISVTTSYNLARLYEGLCEFHESEKLYKNILREHPNYVDCYL 535

Query: 63  K-AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           +   +   + NF +A ++F +    ++D P    +    L  A       ++       E
Sbjct: 536 RLGAMARDKGNFYEASDWFKEALQINQDHP-DAWSLIGNLHLA-----KQEWGPGQKKFE 589

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ----RATKLMLQYMSRIVERYTNSP- 173
             + Q P ++N  Y    +G  + Q +     D+    R     L    +++    +S  
Sbjct: 590 RILKQ-PSTQNDTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRN--DSKN 646

Query: 174 ---------------YVKGARFYVTVGRNQLAAKE---VEIGRYYLKRGEYVAAIPRFQL 215
                          YV+ AR      R   A      + +   Y+++ +Y++A+  ++ 
Sbjct: 647 LFAANGIGAVLAHKGYVREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYEN 706

Query: 216 VLANY---SDAEHAEEAMARLVEAYVALALMDEAREVV 250
            L  +    +     E +  L  A      + E ++++
Sbjct: 707 CLRKFYKHQNT----EVLLYLARALFKCGKLQECKQIL 740


>gi|17979432|gb|AAL49858.1| putative TPR repeat nuclear phosphoprotein [Arabidopsis thaliana]
          Length = 740

 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 61/194 (31%), Gaps = 34/194 (17%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           K  L L +     A + F       P       +LL  A V+++ G++ ++  L +  + 
Sbjct: 134 KGQLLLAKGEIDNALQAFKIVLDTAPDN---VPALLGQASVEFNRGRFSESLQLYKRALQ 190

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
            +P       V   +G+   ++               Q   R+++   ++     A   +
Sbjct: 191 VFPGCPAA--VRLGIGLCRYKL--------GQLDKARQAFDRVLQLDPDNVEALVALGIM 240

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
            +  N        IG   +++G     + R Q     Y    +   A+  L   +     
Sbjct: 241 DLQAND------SIG---MRKG-----MDRMQQAFEIYP---YCASALNYLANHFFFTGQ 283

Query: 243 ----MDEAREVVSL 252
                      +++
Sbjct: 284 HFLVEQLTETALAV 297


>gi|65316976|ref|ZP_00389935.1| COG1464: ABC-type metal ion transport system, periplasmic
          component/surface antigen [Bacillus anthracis str.
          A2012]
          Length = 273

 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 25/66 (37%)

Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
           +Q+ K  LT   S ++  L     + + +  L          E+ EKA   L+++    
Sbjct: 1  MFQMKKLLLTALISTSIFGLAACGGKDNDEKKLVVGASNVPHAEILEKAKPLLEKKGIEL 60

Query: 76 AYEYFN 81
            + F 
Sbjct: 61 EVKKFQ 66


>gi|323182682|gb|EFZ68084.1| cellulose synthase operon protein C [Escherichia coli 1357]
          Length = 1157

 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 77/237 (32%), Gaps = 38/237 (16%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQY-PESKNVDYVY--YLVG-------MSYAQMIRDV 148
             +   + AG+  QA       + Q+ P      Y Y  YL G       +++   I  +
Sbjct: 500 RLSQDLWQAGQRSQA-DTLMRNLAQHKPNDPEQVYAYGLYLSGHDQDRAALAH---INSL 555

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEI 196
           P  Q         +  +V R   S  V      +   G+   A             ++ +
Sbjct: 556 PRAQWN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTL 609

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
             +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 610 ADWAQQRRDYTAARAAYQNVLTLEPT---NADAILGLTEVDIAAGDTAAARSQLAKL 663



 Score = 35.9 bits (82), Expect = 5.6,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 60/210 (28%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + +  P      Y   L
Sbjct: 508 AGQRSQADTLMRNLAQHKPNDPEQVYAYGL 537


>gi|322617883|gb|EFY14776.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
          Length = 1150

 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     E  +++A E   +     P +        
Sbjct: 436 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 492

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156
             +   + AG++ QA +       Q P      Y Y  YL G            D    +
Sbjct: 493 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 539

Query: 157 LMLQYMSRIVERYTNSPY 174
             L +++ +      S +
Sbjct: 540 AALAHLNTL----PTSQW 553


>gi|291240364|ref|XP_002740083.1| PREDICTED: CG4341-like [Saccoglossus kowalevskii]
          Length = 825

 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 61/195 (31%), Gaps = 41/195 (21%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL-MSAFVQYSAGKYQQAASLGE 118
           +Y    L   ++ + +A E F +  R  P      +SL  M        G+Y++A S   
Sbjct: 597 LYNLGRLKHDQKKYEEAVEAFKESIRRRP-DYYPPQSLYNMLGDSLSKLGQYKEAES--- 652

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
                          ++L  +S       V  D     L   ++  I  R+        A
Sbjct: 653 ---------------WFLKSLS-------VKSDHVPAYLTYAHLLDITGRH------TEA 684

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA-EHAEEAMARL---V 234
              +    +     E E    Y   G++ A I +F+     Y  A +   +    +    
Sbjct: 685 TDMLNKALDL----EPENAGVYQHYGQHFAEIAKFKEAADMYRKAIKLRPDDFEIMFNGA 740

Query: 235 EAYVALALMDEAREV 249
            A+    L  +A   
Sbjct: 741 NAHRQAGLNADAEMY 755


>gi|254462503|ref|ZP_05075919.1| TPR domain protein [Rhodobacterales bacterium HTCC2083]
 gi|206679092|gb|EDZ43579.1| TPR domain protein [Rhodobacteraceae bacterium HTCC2083]
          Length = 207

 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 17/134 (12%), Positives = 40/134 (29%), Gaps = 16/134 (11%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           +       ++++    L       A+E+    +   P    A     M A   Y    Y 
Sbjct: 82  SGSASADLLFKRGRDALGANKPKVAFEHLTALTDHAP--DFAE-GWHMRASALYQQELYG 138

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGM-SYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
            A    E  +T  P+  +      + G+ +  + + D            +   +++  + 
Sbjct: 139 PALEDLERALTLSPQHFDA-----IQGLGAIFEQLGDRKR-------AYEVYEQVLAIHP 186

Query: 171 NSPYVKGARFYVTV 184
           +   V  A   +  
Sbjct: 187 HHTTVLEAMERLEA 200


>gi|205360321|ref|ZP_02682619.2| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|205350236|gb|EDZ36867.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
          Length = 1150

 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     E  +++A E   +     P +        
Sbjct: 436 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 492

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156
             +   + AG++ QA +       Q P      Y Y  YL G            D    +
Sbjct: 493 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 539

Query: 157 LMLQYMSRIVERYTNSPY 174
             L +++ +      S +
Sbjct: 540 AALAHLNTL----PTSQW 553


>gi|205357600|ref|ZP_02571940.2| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205330678|gb|EDZ17442.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
          Length = 1150

 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     E  +++A E   +     P +        
Sbjct: 436 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 492

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156
             +   + AG++ QA +       Q P      Y Y  YL G            D    +
Sbjct: 493 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 539

Query: 157 LMLQYMSRIVERYTNSPY 174
             L +++ +      S +
Sbjct: 540 AALAHLNTL----PTSQW 553


>gi|197300669|ref|ZP_02660276.2| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|197291266|gb|EDY30618.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
          Length = 1150

 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     E  +++A E   +     P +        
Sbjct: 436 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 492

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156
             +   + AG++ QA +       Q P      Y Y  YL G            D    +
Sbjct: 493 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 539

Query: 157 LMLQYMSRIVERYTNSPY 174
             L +++ +      S +
Sbjct: 540 AALAHLNTL----PTSQW 553


>gi|220927089|ref|YP_002502391.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
           nodulans ORS 2060]
 gi|219951696|gb|ACL62088.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
           nodulans ORS 2060]
          Length = 988

 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 15/114 (13%), Positives = 36/114 (31%), Gaps = 14/114 (12%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            +   +  +  + +A   ++Q  R  P   +A        F   S G+Y +A +  ++ +
Sbjct: 65  NRGFAYQSKGEYDRAIADYDQVLRLNPKNVIAYN---NRGFAYQSKGEYDRAIADYDQAL 121

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
              P+     Y          +   DV   +      +   S+ +       + 
Sbjct: 122 QLNPK-----YA------IAYRNRGDVFRSKGEHDRAIADYSQALRFNPKYIFA 164



 Score = 35.9 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 42/141 (29%), Gaps = 23/141 (16%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
            +   F  +  + +A   ++Q       + FA  AR      AF   S   Y +A +  +
Sbjct: 269 NRGDAFRSKGEYDRAIADYDQALLLDPKYTFAYTAR------AFAFQSKRDYDRALADYD 322

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           + +   P+S           ++  +   D    +      +      +     +      
Sbjct: 323 QALRLDPKS-----------VAAYRNRGDFFRSKGDYDRAIADYDEALRLDPKNKLAYNN 371

Query: 179 RFYVTVGRNQLAAKEVEIGRY 199
           R  V   +N      + I  +
Sbjct: 372 RGLVFQSKN---EYNLAIADF 389


>gi|148667470|gb|EDK99886.1| FK506 binding protein 4, isoform CRA_a [Mus musculus]
          Length = 455

 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 35/84 (41%), Gaps = 2/84 (2%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFS 74
             +++   L    ++A+C L      ++ +    ++  D   ++ ++ +    L   +F 
Sbjct: 308 MQKVHALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFD 367

Query: 75  KAYEYFNQCSRDFPFAGVARKSLL 98
            A   F +  + +P +  A K+ L
Sbjct: 368 LARADFQKVLQLYP-SNKAAKTQL 390



 Score = 36.2 bits (83), Expect = 5.2,   Method: Composition-based stats.
 Identities = 18/146 (12%), Positives = 43/146 (29%), Gaps = 30/146 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARK-------SLLMSAFVQYSAGK 109
           E+   + KE  + +A   + +      +         +K       S L  A        
Sbjct: 272 ERGTAYFKEGKYKQALLQYKKIVSWLEYESSFSGEEMQKVHALRLASHLNLAMCHLKLQA 331

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           +  A     + +     ++      +  G ++   + D                ++++ Y
Sbjct: 332 FSAAIESCNKALELDSNNEKG---LFRRGEAHL-AVNDFDL-------ARADFQKVLQLY 380

Query: 170 TNSPYVKGARFYVTVG----RNQLAA 191
            ++     A+  + V     R QLA 
Sbjct: 381 PSNK---AAKTQLAVCQQRTRRQLAR 403


>gi|145219113|ref|YP_001129822.1| hypothetical protein Cvib_0298 [Prosthecochloris vibrioformis DSM
           265]
 gi|145205277|gb|ABP36320.1| conserved hypothetical protein [Chlorobium phaeovibrioides DSM 265]
          Length = 690

 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 34/101 (33%), Gaps = 17/101 (16%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
              L +F   A C       +SS               E+Y KA    +   +++A E +
Sbjct: 12  MAVLGMFLLFAGCSSPDNSGESS--------------SEMYAKASDLGRHGQYARAIELY 57

Query: 81  N---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
                     P +  A  +L+   +++   G Y  A +  E
Sbjct: 58  GRGLALESLDPPSDAAVVALVSKRWLEGLTGSYDAALATTE 98


>gi|154345117|ref|XP_001568500.1| MAP kinase kinase-like protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134065837|emb|CAM43615.1| putative protein kinase [Leishmania braziliensis MHOM/BR/75/M2904]
          Length = 1416

 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 17/146 (11%), Positives = 44/146 (30%), Gaps = 40/146 (27%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEE 119
           E+     K   + +A  Y+ Q     P +      +S     F  ++  +++++A+   +
Sbjct: 131 EEGNEAFKAGRYHEAIRYYTQAIEVDPDSEFIYTNRS-----FAYFNIKEFEKSAADAAK 185

Query: 120 -------YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
                  +   +          Y +G++   +  D  +   + +                
Sbjct: 186 AVEINANFFKGH----------YRLGLAQMSL-NDFGHAMDSLRRAWAL----------- 223

Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGR 198
                A       R  +A  E ++ R
Sbjct: 224 --APDANK--EAIRVAMAKCESKMAR 245


>gi|118349353|ref|XP_001033553.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89287902|gb|EAR85890.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 644

 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 40/90 (44%), Gaps = 14/90 (15%)

Query: 48  LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYS 106
           +  + +    + +Y      +K+Q ++ A +Y N +      F   + ++L + A+  Y 
Sbjct: 4   IKQIPEGERTKTIY----TLIKDQKYNDAIQYLNYELQ----FTPRS-RALSLLAYCYYM 54

Query: 107 AGKYQQAASLGEEYITQYPESKNVD-YVYY 135
              +  A+ + E+ +  YP   +VD Y  Y
Sbjct: 55  NQDFSNASKIYEQLVNYYP---DVDEYKLY 81



 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 58/151 (38%), Gaps = 28/151 (18%)

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY-TNSPYVKGARFYVTV 184
            +K++D    L  ++          D  A +  L+     +E+Y      V  A+  +  
Sbjct: 369 ANKHIDQ---LRKITKNIQDARQQRDSDAIRRALKEFDECIEKYIP----VLMAQAKIYW 421

Query: 185 ------GRNQL--------AAKE---VEIGR-YYLKRGEYVAAIPRFQLVLANYSDAEHA 226
                    +L        A  E   + +   ++++  +Y  A+  ++ ++  Y+D    
Sbjct: 422 DRENYAAVEKLFKQSAEFCADHETWKLNVANVFFVQDNKYREALRYYEPIVKKYNDNLLQ 481

Query: 227 EEAMAR--LVEAYVALALMDEAREVVSLIQE 255
            +AM    L  +Y+ +   ++A E++  ++ 
Sbjct: 482 LQAMVIANLCVSYIMVNQNEDAEELMRKLER 512


>gi|85858724|ref|YP_460926.1| TPR repeat-containing protein [Syntrophus aciditrophicus SB]
 gi|85721815|gb|ABC76758.1| tetratricopeptide repeat family protein [Syntrophus aciditrophicus
           SB]
          Length = 563

 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 27/215 (12%), Positives = 68/215 (31%), Gaps = 47/215 (21%)

Query: 64  AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
              +L++ N+  A   F                +        + Y   +Y +A    ++ 
Sbjct: 252 GEFYLRQGNYQAAEAVFRDSLTIDDS------NKDVHFTLGLLYYEQQRYDRAIEAFQKA 305

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +   P  + +   YY +   Y +        Q+     +    ++     +S +   AR 
Sbjct: 306 LKLAPSDQKI---YYFLASVYDE--------QQENDKAMDTYGKVA---PDSEWYGNARI 351

Query: 181 YVTVGRNQLAAKEVEI--------------------GRYYLKRGEYVAAIPRFQLVLANY 220
            + +   +    +  I                    G  Y ++ +Y  A    +  L ++
Sbjct: 352 RMGMLLREEGRIDAAISLIRETLSTEAKAPNLYAYLGSLYQEKAQYPEAENLLKEGLKDF 411

Query: 221 SDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQ 254
             +   EE    L E Y  +   +++ +E+  +++
Sbjct: 412 PRS---EELHYGLGEVYSKMDRFEDSIKEMKRVLE 443


>gi|71281219|ref|YP_269687.1| TPR domain-containing protein [Colwellia psychrerythraea 34H]
 gi|71146959|gb|AAZ27432.1| TPR domain protein [Colwellia psychrerythraea 34H]
          Length = 778

 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 17/117 (14%), Positives = 45/117 (38%), Gaps = 21/117 (17%)

Query: 62  EKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
            + ++   +  + +A + F       + F       ++ L  + V Y  G+ Q++  + +
Sbjct: 606 NRGIIAAYQGQYDQAIKAFKQGIAIEKHF------ARTYLNLSQVYYQRGENQKSIEILQ 659

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT-NSPY 174
           +  +  P+  ++ Y     G++Y ++   V           Q ++   +    NS Y
Sbjct: 660 QGKSANPDDASLPYNL---GLAYIRVQDKV--------KAAQALAIATQLAPQNSHY 705


>gi|50962841|ref|NP_796342.2| transmembrane and TPR repeat-containing protein 2 [Mus musculus]
 gi|81909357|sp|Q56A06|TMTC2_MOUSE RecName: Full=Transmembrane and TPR repeat-containing protein 2
 gi|62132956|gb|AAH92226.1| Transmembrane and tetratricopeptide repeat containing 2 [Mus
           musculus]
 gi|187953887|gb|AAI38363.1| Transmembrane and tetratricopeptide repeat containing 2 [Mus
           musculus]
 gi|187953889|gb|AAI38364.1| Transmembrane and tetratricopeptide repeat containing 2 [Mus
           musculus]
          Length = 836

 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 34/99 (34%), Gaps = 20/99 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYF--------NQCSRDFPFAGVARKS-----LLMSAFVQYSAG 108
              ++ + +    +A   F                    A KS     L     + +  G
Sbjct: 566 NTGIILMNQGKTEEARRTFLKCSEIPDENLKD-----PHAHKSSVTSCLYNLGKLYHEQG 620

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYY-LVGMSYAQMIR 146
           +Y++A S+  E I + P         Y ++G +Y ++ +
Sbjct: 621 RYEEALSVYREAIQKMPRH-FAPQSLYNMMGEAYMRLSK 658


>gi|254230382|ref|ZP_04923765.1| tetratricopeptide repeat domain protein [Vibrio sp. Ex25]
 gi|262395014|ref|YP_003286868.1| hypothetical protein VEA_004245 [Vibrio sp. Ex25]
 gi|151937088|gb|EDN55963.1| tetratricopeptide repeat domain protein [Vibrio sp. Ex25]
 gi|262338608|gb|ACY52403.1| hypothetical protein VEA_004245 [Vibrio sp. Ex25]
          Length = 760

 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 26/205 (12%), Positives = 68/205 (33%), Gaps = 43/205 (20%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKA-YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           D+     +Y +A   L++     A  +Y+      +  +     +L    +  + + +  
Sbjct: 189 DLIKAESLYSQAKTMLEDSRSDLALIDYYTAVGEFYLNSKKYNLALSELLYGYWQSIESD 248

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR---IVER 168
             A L +                        +++  +  ++R     ++Y+S+     + 
Sbjct: 249 SGARLAK----------------------VNRLLARLFQERRVYDKAIEYLSQAADFYDS 286

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y +SP +      +              G  Y  +G++  A+  +  VL + S +++   
Sbjct: 287 YPSSPILADVLEQM--------------GDIYFYQGKFNLALVHYFNVLDHESTSKNINR 332

Query: 229 AMAR---LVEAYVALALMDEAREVV 250
            +     L   Y+ L     A + +
Sbjct: 333 IIKIRLSLAATYLQLYNYALAEQYL 357


>gi|332030604|gb|EGI70292.1| Serine/threonine-protein phosphatase 5 [Acromyrmex echinatior]
          Length = 492

 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 48/148 (32%), Gaps = 25/148 (16%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFP-----F 89
           +G   +        + ++   + E+Y E+A  + K Q + KA E + +     P     +
Sbjct: 1   MGDNGRGDVASVSPATSEDAAKAELYKEEANEYFKNQVYDKAIELYTKAIELNPSVAIYY 60

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
              +  + L + +  Y+      A  L + Y+            YY    +Y  +     
Sbjct: 61  GNRSI-AYLRTEYFGYALTDASTAIMLDKNYVK----------GYYRRAAAYMSL----- 104

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKG 177
                 KL L     +V+   N      
Sbjct: 105 ---GKFKLALMDYKTVVKARPNDKDASD 129


>gi|328874364|gb|EGG22729.1| hypothetical protein DFA_04859 [Dictyostelium fasciculatum]
          Length = 541

 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 35/123 (28%), Gaps = 16/123 (13%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
             F  A E  N   +  P +  A       A +     +  +A    +  +   P ++  
Sbjct: 311 GRFDNALEAINTAIKIHPGSVYAHSI---CASIHLRNKEPLKAIDTIDSALRVDPNNE-- 365

Query: 131 DYVYYLVGMSYAQMIR-DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
                     +A+ IR D   D    K  +     ++               + +  N +
Sbjct: 366 ----------FAKTIRADALMDMNRFKESIGLYREVIANIMERDRPDEVNTRIAILHNMI 415

Query: 190 AAK 192
           AA 
Sbjct: 416 AAY 418


>gi|307314342|ref|ZP_07593949.1| cellulose synthase operon C domain protein [Escherichia coli W]
 gi|306906057|gb|EFN36577.1| cellulose synthase operon C domain protein [Escherichia coli W]
 gi|315062809|gb|ADT77136.1| cellulose synthase subunit [Escherichia coli W]
 gi|323376603|gb|ADX48871.1| cellulose synthase operon C domain protein [Escherichia coli KO11]
          Length = 1157

 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 77/237 (32%), Gaps = 38/237 (16%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQY-PESKNVDYVY--YLVG-------MSYAQMIRDV 148
             +   + AG+  QA       + Q+ P      Y Y  YL G       +++   I  +
Sbjct: 500 RLSQDLWQAGQRSQA-DTLMRNLAQHKPNDPEQVYAYGLYLSGHDQDRAALAH---INSL 555

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEI 196
           P  Q         +  +V R   S  V      +   G+   A             ++ +
Sbjct: 556 PRAQWN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTL 609

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
             +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 610 ADWAQQRRDYTAARAAYQNVLTLEPT---NADAILGLTEVDIAAGDTAAARSQLAKL 663



 Score = 35.9 bits (82), Expect = 5.6,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 60/210 (28%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++     +         +  +  +S    R      +      
Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + +  P      Y   L
Sbjct: 508 AGQRSQADTLMRNLAQHKPNDPEQVYAYGL 537


>gi|203287653|ref|YP_002222668.1| hypothetical protein BRE_192 [Borrelia recurrentis A1]
 gi|201084873|gb|ACH94447.1| uncharacterized conserved protein [Borrelia recurrentis A1]
          Length = 380

 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 45/212 (21%), Positives = 76/212 (35%), Gaps = 36/212 (16%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           K++NF KA  Y+ +C            +L        S G Y++A  + EEY+    +SK
Sbjct: 70  KKRNFDKAIIYYQKCLAKHSNNNY---ALFGLGDCYRSLGDYKKATDVWEEYLKY--DSK 124

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV--------KGARF 180
           N+  V   V  SY ++        +  +   Q   R++E   ++ Y            + 
Sbjct: 125 NIT-VLTRVASSYRKL--------KNFQKSRQSYLRVLELVPDNDYALVGIGHLYYDFKE 175

Query: 181 YVTVGRNQLAAKEVE-----------IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
           Y    +  L   E+            IG  Y K  E+   I  F+  L     + +   A
Sbjct: 176 YKEALKYWLKMYEINQVKIDVRLLTSIGNCYRKLKEFSKGIYFFKRALEI---SPNNFYA 232

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +  L + Y       EA +    I +R P+  
Sbjct: 233 IFGLADCYRGSKEYAEALKYWLTIIDRDPKNN 264


>gi|197249812|ref|YP_002148544.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197213515|gb|ACH50912.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
          Length = 1150

 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     E  +++A E   +     P +        
Sbjct: 436 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 492

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156
             +   + AG++ QA +       Q P      Y Y  YL G            D    +
Sbjct: 493 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 539

Query: 157 LMLQYMSRIVERYTNSPY 174
             L +++ +      S +
Sbjct: 540 AALAHLNTL----PTSQW 553


>gi|108759190|ref|YP_631570.1| hypothetical protein MXAN_3373 [Myxococcus xanthus DK 1622]
 gi|108463070|gb|ABF88255.1| conserved hypothetical protein [Myxococcus xanthus DK 1622]
          Length = 512

 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 6/55 (10%), Positives = 20/55 (36%), Gaps = 3/55 (5%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
             L  +   ++ A   + +  R   ++    ++L  + F ++    +  A    +
Sbjct: 231 GRLHYRRGEYTDASAAYERVPR---YSRYWDQALFENGFARFQNEDFGGALGSLQ 282


>gi|94468750|gb|ABF18224.1| FKBP-type peptidyl-prolyl cis-trans isomerase [Aedes aegypti]
          Length = 285

 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 37/91 (40%), Gaps = 6/91 (6%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           L ++ + A+C+    +   ++D   +++  D +  + +Y +    L   +F KA E FN 
Sbjct: 180 LAVYLNKALCYQKLNDHDEAKDACNEALNIDKKSVKALYRRGQSRLSLGDFEKALEDFNA 239

Query: 83  CSRDFPFAGVARKSLLMSA-FVQYSAGKYQQ 112
                P      K+ L  A   +     Y +
Sbjct: 240 VREIEPEN----KAALNQATICKQKIKDYNE 266


>gi|117925010|ref|YP_865627.1| hypothetical protein Mmc1_1712 [Magnetococcus sp. MC-1]
 gi|117608766|gb|ABK44221.1| Tetratricopeptide TPR_2 repeat protein [Magnetococcus sp. MC-1]
          Length = 595

 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 44/121 (36%), Gaps = 13/121 (10%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
           V  D          + ++A     +++F +A     +     P      K+LL+ A    
Sbjct: 125 VERDPAMGGALAESLLQQAQHEFAQEHFVEAAVLLTEAQCYRPNH---MKTLLLQARAWL 181

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
            +G   +AA+     +   P   N+  V++ +G   AQ       D+   +    ++ + 
Sbjct: 182 KSGDLAKAATGYGRLLELNP---NLPEVHHTLGTILAQ-------DKAHAQQAAHHLRQA 231

Query: 166 V 166
           V
Sbjct: 232 V 232


>gi|328950327|ref|YP_004367662.1| Tetratricopeptide TPR_1 repeat-containing protein [Marinithermus
           hydrothermalis DSM 14884]
 gi|328450651|gb|AEB11552.1| Tetratricopeptide TPR_1 repeat-containing protein [Marinithermus
           hydrothermalis DSM 14884]
          Length = 496

 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 10/62 (16%), Positives = 17/62 (27%), Gaps = 3/62 (4%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              +L+   +  A   F        +   A  +        Y  G  + A    E+    
Sbjct: 46  GRAYLEAGRYEDAARLFEDVLALD-YNNFA--AHFGLGLAHYRQGNLKAARFEFEQLTHL 102

Query: 124 YP 125
           YP
Sbjct: 103 YP 104


>gi|300718975|ref|YP_003743778.1| cellulose synthase operon protein C [Erwinia billingiae Eb661]
 gi|299064811|emb|CAX61931.1| cellulose synthase operon protein C [Erwinia billingiae Eb661]
          Length = 1269

 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 51/166 (30%), Gaps = 28/166 (16%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           +A   L   N  +A     Q ++ FP     R   L  A +    G    AA + +    
Sbjct: 464 QAKQALAAGNTQQAIAILQQGTQRFPTDPWLR---LDLARIYQQQGNTSLAAGIMQ---- 516

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT---NSPYVKGAR 179
             P  +N        G S  ++     +   +     Q +  ++ R      S  ++   
Sbjct: 517 --PAFRN--------GASNNEIYAGALFASES--GAWQQVQTLIARIPARSQSSEMRELS 564

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
                        ++ + + YL +G   AA    + +  N  +   
Sbjct: 565 RRANF------NLQMAVAQQYLAQGSNAAAANTLKALAVNPPENPA 604


>gi|288960117|ref|YP_003450457.1| hypothetical protein AZL_a03820 [Azospirillum sp. B510]
 gi|288912425|dbj|BAI73913.1| hypothetical protein AZL_a03820 [Azospirillum sp. B510]
          Length = 484

 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 17/148 (11%), Positives = 51/148 (34%), Gaps = 16/148 (10%)

Query: 27  FFSIAVCFLVGWERQSSRDVYLDSV-TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
             +IA+  L         ++Y   +  D      ++    +  +  +  +A++  ++   
Sbjct: 13  ALAIALDHLKAGRLAEGEELYARILDADPGNAEALHRMGFIAGRRGDMDRAFDLLSRSVE 72

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
             P A     +L     + + A + ++A       +   P+  + DY         ++ +
Sbjct: 73  RAPDAD----ALFNLGTLHHRALRTEEAIVAYRRALALRPDFPDCDYHL-------SEAL 121

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSP 173
           +            L  +  +++R+ + P
Sbjct: 122 QGAGR----LDEALAALDTLLDRHPHYP 145


>gi|282163899|ref|YP_003356284.1| hypothetical protein MCP_1229 [Methanocella paludicola SANAE]
 gi|282156213|dbj|BAI61301.1| hypothetical protein [Methanocella paludicola SANAE]
          Length = 244

 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 46/138 (33%), Gaps = 21/138 (15%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           K +L+     + +A   F++         ++   LL  A      G + +A    E+ + 
Sbjct: 10  KGMLYASIGRYDEAAAIFDRM------GEISPDLLLCEAGALSRMGSFARALECIEKALE 63

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR--- 179
           + P S +    ++L G+ Y Q               L Y+   ++        +      
Sbjct: 64  KNPISPD---AWFLKGLLYYQR--------GNLMAALGYLEEALDIDPKHVEARSVAGNC 112

Query: 180 -FYVTVGRNQLAAKEVEI 196
            +Y+   +  L   E  I
Sbjct: 113 HYYMGEYKEALEYYETAI 130


>gi|269104631|ref|ZP_06157327.1| tPR repeat protein SEL1 subfamily [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268161271|gb|EEZ39768.1| tPR repeat protein SEL1 subfamily [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 333

 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 51/132 (38%), Gaps = 18/132 (13%)

Query: 19  LYKFALTIFFSI-AVCFLVGWERQSSRDVYLDSVTDVRYQRE-VYEKAV----LFLKEQN 72
           L    +T+F S  A  + + +E  +S D+ +    +     E +Y  A       + ++N
Sbjct: 7   LLSIGITLFLSTPAFAYDLSYEEYTSEDLAVVKKAETSTDAEVIYNAANILMSESMMQEN 66

Query: 73  FSKAYEYFNQC-SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
             +  +Y NQ    + P      K+ L  A   Y    Y +A  L  +      ES    
Sbjct: 67  IEQGIKYLNQLAENNHP------KATLTLADYYYEEEDYTKALKLYHQL-----ESSQDP 115

Query: 132 YVYYLVGMSYAQ 143
           YV Y +G+ Y  
Sbjct: 116 YVLYSLGIMYFD 127


>gi|194469945|ref|ZP_03075929.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|205358577|ref|ZP_02657510.2| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|194456309|gb|EDX45148.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|205333258|gb|EDZ20022.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
          Length = 1150

 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     E  +++A E   +     P +        
Sbjct: 436 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 492

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156
             +   + AG++ QA +       Q P      Y Y  YL G            D    +
Sbjct: 493 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 539

Query: 157 LMLQYMSRIVERYTNSPY 174
             L +++ +      S +
Sbjct: 540 AALAHLNTL----PTSQW 553


>gi|170581356|ref|XP_001895649.1| TPR Domain containing protein [Brugia malayi]
 gi|158597331|gb|EDP35505.1| TPR Domain containing protein [Brugia malayi]
          Length = 1352

 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 21/142 (14%), Positives = 48/142 (33%), Gaps = 18/142 (12%)

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKG------ARFY-VTVGRNQLAA-KE---- 193
           R    D+   +  L   S+ ++ +  + +         A+   +   R+  A  +E    
Sbjct: 823 RKKEKDKDYRERALMMYSKALKVHPKNIWAANGIGCILAQKGAIQEARDIFAQVREATAD 882

Query: 194 -----VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
                + I   Y+++ +YVAAI  +   +  ++        +  L  A+       E R 
Sbjct: 883 FSDVWINIAHVYMEQKQYVAAIQMYDNCIKKFNRHNDVS-LLLYLARAHYKAGKFSECRH 941

Query: 249 VVSLIQERYPQGYWARYVETLV 270
           ++       P     ++    V
Sbjct: 942 ILEKAICEAPDNMMLKFNHAFV 963


>gi|148244624|ref|YP_001219318.1| hypothetical protein COSY_0475 [Candidatus Vesicomyosocius okutanii
           HA]
 gi|146326451|dbj|BAF61594.1| hypothetical protein [Candidatus Vesicomyosocius okutanii HA]
          Length = 221

 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 42/114 (36%), Gaps = 14/114 (12%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             ++   + +  Y+NS Y     +++               + YL + ++  A   F + 
Sbjct: 111 QAIKLFKQYLVDYSNSSYTSDVYYWL--------------AKSYLAKEDFHNAKNTFVVF 156

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
                       ++  L + Y+ L   D+A+ ++S +  ++P        + L+
Sbjct: 157 QQQNPLHYKFSNSLFDLAKVYIELNKQDKAQGLLSTMLVKFPSHKAINRAKQLL 210



 Score = 35.5 bits (81), Expect = 8.1,   Method: Composition-based stats.
 Identities = 12/84 (14%), Positives = 28/84 (33%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           ++    +    +  + VY +A   L  + + +A + F Q   D+  +          A  
Sbjct: 80  KETSFKTREYDKKAKRVYTQARSLLIIEQYDQAIKLFKQYLVDYSNSSYTSDVYYWLAKS 139

Query: 104 QYSAGKYQQAASLGEEYITQYPES 127
             +   +  A +    +  Q P  
Sbjct: 140 YLAKEDFHNAKNTFVVFQQQNPLH 163


>gi|115767221|ref|XP_799094.2| PREDICTED: similar to KIAA0155, partial [Strongylocentrotus
           purpuratus]
          Length = 1101

 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 50/128 (39%), Gaps = 18/128 (14%)

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG-------ARFYVTVGRNQLAA- 191
           +  Q  RD   ++R  +  L    +++   + + Y           + Y+   R+  +  
Sbjct: 599 TLYQPTRDKEKEKRHQERALARYKQVLRSDSRNIYAANGIGCILAMKGYIREARDVFSQV 658

Query: 192 KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
           +E         + +   Y+++ +Y++AI  ++  +  +    H    ++ L  AY     
Sbjct: 659 REATADVSDVWLNLAHIYVEQKQYISAIQMYENCIKKFFKF-HNTTVLSFLARAYFKTGK 717

Query: 243 MDEAREVV 250
           + E R+ +
Sbjct: 718 LKECRQTL 725


>gi|222053746|ref|YP_002536108.1| Exostosin family protein [Geobacter sp. FRC-32]
 gi|221563035|gb|ACM19007.1| Exostosin family protein [Geobacter sp. FRC-32]
          Length = 794

 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 22/77 (28%), Gaps = 11/77 (14%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYE-YFNQCSRDFPFAGVARK---SLLMSAFVQYSAGKY 110
               + Y          ++  A   Y            +A +    L         +G+ 
Sbjct: 2   TSAEDFYRSGNANATRGDYDGAIAAYLQALQ-------LAPRQPAVLNNLGLAYVESGRL 54

Query: 111 QQAASLGEEYITQYPES 127
            +A  + E +I   PE+
Sbjct: 55  DEAKVIFERFIALDPEN 71


>gi|59711571|ref|YP_204347.1| hypothetical protein VF_0964 [Vibrio fischeri ES114]
 gi|59479672|gb|AAW85459.1| predicted protein [Vibrio fischeri ES114]
          Length = 252

 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 43/123 (34%), Gaps = 15/123 (12%)

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            Q   D+   ++      +     V  Y +S Y   A +++              G+ Y 
Sbjct: 136 YQNAVDLILKEKNYAGATKAFQEFVTAYPDSVYSSNAHYWL--------------GQLYF 181

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            +   V A   F  V+ +Y+D+    +A+ +L E          A++    +   YP   
Sbjct: 182 AQKNDVEAAKSFAKVV-SYADSNKRADALLKLGEVAKRNNNNAAAKKYYQKVVNEYPDST 240

Query: 262 WAR 264
            A+
Sbjct: 241 TAK 243



 Score = 35.9 bits (82), Expect = 5.8,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 50/148 (33%), Gaps = 14/148 (9%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
           ++  +    +      +   Y+ AV   LKE+N++ A + F +    +P +  +  +   
Sbjct: 116 EAKPEATEGAYAADTNENAAYQNAVDLILKEKNYAGATKAFQEFVTAYPDSVYSSNAHYW 175

Query: 100 SAFVQYSAGKYQQAASLGEEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
              + ++     +A    + +     Y +S         +G        +V         
Sbjct: 176 LGQLYFAQKNDVEA---AKSFAKVVSYADSNKRADALLKLG--------EVAKRNNNNAA 224

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVG 185
             +Y  ++V  Y +S   K A   +   
Sbjct: 225 AKKYYQKVVNEYPDSTTAKTAASKLESL 252


>gi|30062802|ref|NP_836973.1| tetratricopeptide repeat protein [Shigella flexneri 2a str. 2457T]
 gi|30041050|gb|AAP16780.1| putative heat shock protein [Shigella flexneri 2a str. 2457T]
 gi|281600703|gb|ADA73687.1| putative heat shock protein [Shigella flexneri 2002017]
 gi|313649468|gb|EFS13899.1| tetratricopeptide repeat family protein [Shigella flexneri 2a str.
           2457T]
 gi|332757935|gb|EGJ88262.1| tetratricopeptide repeat family protein [Shigella flexneri 4343-70]
 gi|332759437|gb|EGJ89745.1| tetratricopeptide repeat family protein [Shigella flexneri 2747-71]
 gi|332760376|gb|EGJ90666.1| tetratricopeptide repeat family protein [Shigella flexneri K-671]
 gi|332767516|gb|EGJ97710.1| tetratricopeptide repeat family protein [Shigella flexneri 2930-71]
 gi|333004596|gb|EGK24120.1| tetratricopeptide repeat family protein [Shigella flexneri VA-6]
 gi|333005457|gb|EGK24975.1| tetratricopeptide repeat family protein [Shigella flexneri K-218]
 gi|333007619|gb|EGK27097.1| tetratricopeptide repeat family protein [Shigella flexneri K-272]
 gi|333019119|gb|EGK38409.1| tetratricopeptide repeat family protein [Shigella flexneri K-304]
          Length = 389

 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 62/186 (33%), Gaps = 36/186 (19%)

Query: 64  AVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
              ++    + +A + FNQ     DF    + +   +  A       ++Q+A  + E  +
Sbjct: 114 GRDYMAAGLYDRAEDMFNQLTDETDFRIGALQQLLQIYQA-----TSEWQKAIDVAERLV 168

Query: 122 TQYPESKNVDYVYYL--VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
               + + V+  ++   + + +     D+       K              NS       
Sbjct: 169 KLGKDKQRVEIAHFYCELALQHM-ASDDLDRAMTLLKKGAAADK-------NS------- 213

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                     A   + +GR ++ +GEY  A+   Q V++   D E   E +  L   Y  
Sbjct: 214 ----------ARVSIMMGRVFMAKGEYAKAVESLQRVIS--QDRELVSETLEMLQTCYQQ 261

Query: 240 LALMDE 245
           L    E
Sbjct: 262 LGKTAE 267


>gi|16330801|ref|NP_441529.1| hypothetical protein sll1882 [Synechocystis sp. PCC 6803]
 gi|1653294|dbj|BAA18209.1| sll1882 [Synechocystis sp. PCC 6803]
          Length = 274

 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 29/229 (12%), Positives = 64/229 (27%), Gaps = 52/229 (22%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF-----VQYSAGKYQQAASLG 117
           +    L+  +  KA   F Q                  A+           +Y  A +  
Sbjct: 62  EGFDELESGSPLKAIAIFTQVID--------TDDQNADAYNLRGVAYMVIEQYTDALADF 113

Query: 118 EEYITQYPESKNVDYVYYLVG-----MSYAQ-MIRDVP----YDQRAT------------ 155
           ++ I   P+   +   Y+        ++  Q  I D       D +              
Sbjct: 114 DQAIALNPKDPAI---YFNRANVHGVLNNYQGAIDDCSQGILLDPQDVDLLICRGQAQLG 170

Query: 156 ----KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY--LKRGEYVAA 209
               +  +    R +E    S     A ++  +    +   E  +      ++   Y A 
Sbjct: 171 LEQPRQAIPDFDRAIELDPRSE---EAHYFRGLAYAMVNNYERALADLNRTIRLNPYNAD 227

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVAL---ALMDEAREVVSLIQE 255
               +  + +       EE++  +++A   L      + A E+  L+  
Sbjct: 228 AFILRAGIRSEQG--EVEESLEDMIQAINLLDRQGESERATEIRQLLGY 274


>gi|186684525|ref|YP_001867721.1| hypothetical protein Npun_F4407 [Nostoc punctiforme PCC 73102]
 gi|186466977|gb|ACC82778.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102]
          Length = 267

 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 67/215 (31%), Gaps = 28/215 (13%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQ-REVYEKAVLFLKEQNFSKAYEYFNQC 83
            I   +++  + GW              +   Q  E   +A     + +F+ A  Y+ + 
Sbjct: 4   LIGIFLSLLLVFGWATPVMAQSQPPITQEQLKQGDEWANQAFAATNQGDFATAETYWTKI 63

Query: 84  SRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
              FP      + +        + S  K Q+A +   + I   P   +  Y      ++ 
Sbjct: 64  IEQFPTNAGAWSNR-----GNSRVSQNKLQEAIADYNKAIELAPNVTD-PY------LNR 111

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
              +  +          +   + ++E   N      A       +  L   E  I  Y  
Sbjct: 112 GAALEGLGK----WDDAIADYNYVLELDPND---AMAYNNRGNAKTGLGKWEDAIADY-- 162

Query: 202 KRGEYVA---AIPRFQLVLANYSDAEHAEEAMARL 233
           K+   +A   A  R    LA Y +    E+A+  +
Sbjct: 163 KKSNEIAPNFAFARANYALALY-ETGQKEQAIREM 196


>gi|332664594|ref|YP_004447382.1| hypothetical protein Halhy_2640 [Haliscomenobacter hydrossis DSM
           1100]
 gi|332333408|gb|AEE50509.1| Tetratricopeptide TPR_2 repeat-containing protein
           [Haliscomenobacter hydrossis DSM 1100]
          Length = 803

 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 31/73 (42%), Gaps = 11/73 (15%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQC-----SRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           ++ A    +  ++  A + + +         +P      ++ L  A + +  G+Y+ A S
Sbjct: 61  FKIAESARQFNSYRIAAQNYVKVLGSPDKAQYP------EARLRMAEMLHKLGEYKSALS 114

Query: 116 LGEEYITQYPESK 128
             +EY+   P++ 
Sbjct: 115 SYQEYLQANPQAP 127


>gi|258591654|emb|CBE67955.1| protein of unknown function [NC10 bacterium 'Dutch sediment']
          Length = 128

 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 31/99 (31%), Gaps = 12/99 (12%)

Query: 100 SAFVQYSAG---------KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
           +A   Y  G            QA +  E+ I       +    +Y +G+SY    +    
Sbjct: 32  TADAHYELGVSYHEQMFVNLDQAIAEYEQAIKL---RNDFAEAHYHLGLSYHTKAKLGAD 88

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
           D+   +  L+     +         + AR  +     +L
Sbjct: 89  DKVLYRKALKEYKAYLTLLPKGSLAEKARQNIKAVEQRL 127


>gi|283780878|ref|YP_003371633.1| hypothetical protein Psta_3109 [Pirellula staleyi DSM 6068]
 gi|283439331|gb|ADB17773.1| Tetratricopeptide TPR_2 repeat protein [Pirellula staleyi DSM 6068]
          Length = 298

 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 29/102 (28%), Gaps = 14/102 (13%)

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
            +A  Y++Q S   P            A  Q+S G   +A +   + I   P+       
Sbjct: 82  EEAANYYSQLSAKEPHKPWPH---YHLAATQHSQGNIAEALAGYSKVIQLDPQFPA---A 135

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
           Y   G  Y         DQ      +   +  +     S   
Sbjct: 136 YLSRGNIYI--------DQGDADRAISDFTTALRLKPESSEA 169


>gi|255639295|gb|ACU19945.1| unknown [Glycine max]
          Length = 340

 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 29/110 (26%), Gaps = 18/110 (16%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
            +   K   + +A E F       P    A  +    A       + Q A S  EE    
Sbjct: 229 GLQLYKNGRYDEALEKFESILGSKPEPEEAAVASYNVACCYSKLNQIQAALSSLEE--AL 286

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL-MLQYMSRIVERYTNS 172
                           +  +  + +  D         +    +++R+  S
Sbjct: 287 N---------------AGFEDFKRIRTDPDLANARASEEFDPLLKRFDES 321


>gi|229087634|ref|ZP_04219763.1| TPR domain protein [Bacillus cereus Rock3-44]
 gi|228695675|gb|EEL48531.1| TPR domain protein [Bacillus cereus Rock3-44]
          Length = 515

 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 31/82 (37%), Gaps = 15/82 (18%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           E+A  +++     +A       ++D+P  ++G         A   + +G  +QA  L E 
Sbjct: 167 EEANRYIRNGQLEEAIATLEVVTKDYPEFWSGYN-----NLAIAHFQSGNVEQALKLTEM 221

Query: 120 YITQYPESKNVDYVYYLVGMSY 141
            + + P +        +  +  
Sbjct: 222 ILEKNPGN--------MHALCN 235


>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
 gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
          Length = 720

 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 55/159 (34%), Gaps = 26/159 (16%)

Query: 13  EAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDV-YLDSVTDVRYQREVYEKAVLFL-KE 70
           +  A  +   ++T+   ++ C   G   +  +    +  +  +  + E Y   +  L + 
Sbjct: 436 QMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRA 495

Query: 71  QNFSKAYEYFNQCSRDFPFAG----VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
              S+A     +     PF+      A  +LL +       G  + A     +++   P 
Sbjct: 496 GKLSEA----ERLIDTMPFSPGSAAWA--ALLGACRKY---GNMELAEKAANQFLQLEPT 546

Query: 127 SKNVDYVYYLVGMSY--------AQMIRDVPYDQRATKL 157
           +  V Y+  ++   Y        A  IR +  D+   K 
Sbjct: 547 N-AVPYI--MLASMYSAARKWEEAARIRKLMRDRGIRKK 582


>gi|207858854|ref|YP_002245505.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|206710657|emb|CAR35015.1| Cellulose biosynthesis protein subunit C [Salmonella enterica
           subsp. enterica serovar Enteritidis str. P125109]
          Length = 1143

 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     E  +++A E   +     P +        
Sbjct: 429 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 485

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156
             +   + AG++ QA +       Q P      Y Y  YL G            D    +
Sbjct: 486 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 532

Query: 157 LMLQYMSRIVERYTNSPY 174
             L +++ +      S +
Sbjct: 533 AALAHLNTL----PTSQW 546


>gi|331083105|ref|ZP_08332222.1| hypothetical protein HMPREF0992_01146 [Lachnospiraceae bacterium
          6_1_63FAA]
 gi|330405107|gb|EGG84644.1| hypothetical protein HMPREF0992_01146 [Lachnospiraceae bacterium
          6_1_63FAA]
          Length = 141

 Score = 36.2 bits (83), Expect = 5.2,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 27/62 (43%), Gaps = 15/62 (24%)

Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
          K  + +   +++C L G + +   D               YEK +  L++QN+ +A E F
Sbjct: 2  KKRVVLTVLLSMCLLGGCKGKELTD---------------YEKGMENLEKQNYKEALENF 46

Query: 81 NQ 82
           +
Sbjct: 47 RE 48


>gi|325916180|ref|ZP_08178464.1| Tfp pilus assembly protein PilF [Xanthomonas vesicatoria ATCC
           35937]
 gi|325537600|gb|EGD09312.1| Tfp pilus assembly protein PilF [Xanthomonas vesicatoria ATCC
           35937]
          Length = 690

 Score = 36.2 bits (83), Expect = 5.2,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 61/196 (31%), Gaps = 33/196 (16%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
            + + +    V+ L+     +A     + +   P      + +    F       +  A 
Sbjct: 132 EHPQLLAVDGVVELRRGQSDRALSLLTRAAEQLPDDP---RVMFALGFAYLQKEHFAFAE 188

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
              E  +   P            G +    I  +   Q      +  M  ++ +  +   
Sbjct: 189 RAFERVVELNPP-----------GTALRAFIAQLAQRQGRLDDAVTAMQGVLAQ-PDGDR 236

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
                        +LA  E+E     L+ G    A+   +L LA++         +  L+
Sbjct: 237 PAM---------RRLAG-EME-----LQAGRPDQAVAHLRLALAHWP---ADRRTLHALL 278

Query: 235 EAYVALALMDEAREVV 250
            A+  L  +D+AR+ +
Sbjct: 279 TAWERLGAVDDARDTL 294


>gi|322421503|ref|YP_004200726.1| tetratricopeptide repeat-containing protein [Geobacter sp. M18]
 gi|320127890|gb|ADW15450.1| Tetratricopeptide repeat [Geobacter sp. M18]
          Length = 263

 Score = 36.2 bits (83), Expect = 5.2,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 24/68 (35%), Gaps = 3/68 (4%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           +EKA   LKE  + K+ E   +     P    A +    +A       K +QA    +  
Sbjct: 106 FEKANALLKEGEYQKSAELLEKVIAQAP-GLTAPRV--NAANAYSRLNKPEQAEQHLKAA 162

Query: 121 ITQYPESK 128
           +   P   
Sbjct: 163 LEAVPGHP 170


>gi|242020786|ref|XP_002430832.1| conserved hypothetical protein [Pediculus humanus corporis]
 gi|212516035|gb|EEB18094.1| conserved hypothetical protein [Pediculus humanus corporis]
          Length = 1203

 Score = 36.2 bits (83), Expect = 5.2,   Method: Composition-based stats.
 Identities = 21/150 (14%), Positives = 48/150 (32%), Gaps = 33/150 (22%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI---RDVPYDQRATKLMLQYM 162
            A  +++A +L E     +PE K++ Y  Y   ++        +   +           +
Sbjct: 785 EAKDWKEAFALAER----HPEFKDLVYAPYARWLAENDRFVEAQKAFHQAGKLDEAFDVL 840

Query: 163 SRIVE------RYTNS---------PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
            ++ +      R+ ++          Y++ A       R+ L          Y K    +
Sbjct: 841 QKLTDNAVNEGRFQDAGYYYWVLAQQYLESANDKEGEDRDILIDN-------YFKSER-L 892

Query: 208 AAIPRFQLVLANY---SDAEHAEEAMARLV 234
           A+I      +  Y       +  EA+  + 
Sbjct: 893 ASIYYTYDNIQKYIDEPFTPYMPEALFNIA 922


>gi|254468556|ref|ZP_05081962.1| hypothetical protein KB13_781 [beta proteobacterium KB13]
 gi|207087366|gb|EDZ64649.1| hypothetical protein KB13_781 [beta proteobacterium KB13]
          Length = 304

 Score = 36.2 bits (83), Expect = 5.2,   Method: Composition-based stats.
 Identities = 18/149 (12%), Positives = 46/149 (30%), Gaps = 14/149 (9%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLL 98
           ++ + V     +D    + ++   VL  +      A   F   ++  P         ++L
Sbjct: 38  EAKKIVQQLLDSDKENPQLLFIDGVLLSELGEIENAINVFVSLTKSHPTLPEPYNNLAVL 97

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYP----ESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
              +    +G +  A +  E+ I  +P       N+  +Y  +          +    + 
Sbjct: 98  ---YA--QSGNFDLARTALEKSIKTHPSYATAHVNLGDLYTRMASESYNQALQIDKSNKN 152

Query: 155 TKLMLQYMSRIVERYTNSPY---VKGARF 180
            K  L  + ++             + A+ 
Sbjct: 153 AKTKLSLIKKLFNFQPIDKNIVLAQDAKK 181


>gi|21228450|ref|NP_634372.1| O-linked N-acetylglucosamine transferase [Methanosarcina mazei Go1]
 gi|20906930|gb|AAM32044.1| O-linked N-acetylglucosamine transferase [Methanosarcina mazei Go1]
          Length = 412

 Score = 36.2 bits (83), Expect = 5.2,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 51/167 (30%), Gaps = 44/167 (26%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV-------- 92
             S  V  + V++     E+ E  +  L+   +++A   F +     P            
Sbjct: 49  DDSGSVTNEEVSNEILAAELNECGLDLLRLGKYNEAIIAFEKAIDKDPGNIYLLNNKAAA 108

Query: 93  ---------------------ARKSLL--MSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
                                +  + L    AF     G+Y++A     + +   P+  N
Sbjct: 109 LESLGRFEEALKLYQEAVKINSEDADLWNNMAFSYSQIGEYEKAVEAYGKALDLKPDYPN 168

Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
               +Y   ++ +Q  R         +  +     +++   NS Y +
Sbjct: 169 ---AWYGKALNLSQAGR--------YEEAVDAYDIVLKE--NSNYKE 202



 Score = 36.2 bits (83), Expect = 5.4,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 61/198 (30%), Gaps = 29/198 (14%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
            Y    Y KA+   +   + +A + ++   ++   +     +           G Y +A 
Sbjct: 165 DYPNAWYGKALNLSQAGRYEEAVDAYDIVLKEN--SNYKE-AWAGKGIALGQMGNYDEAI 221

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
              ++ +   PE       +Y  G+    +         + K  L+   + VE    +  
Sbjct: 222 IAYDKALEIDPEFLE---AWYYKGVDLDSL--------GSFKQALKAYEKAVEIDPENDD 270

Query: 175 VK-------GARFYVTVGRNQLAAKEVEI----GRYYLKRGEYVAAIPRFQLVLANYSDA 223
                              N    K +EI       +  +G  ++ + RF   +  Y  A
Sbjct: 271 AWNNMGIDLENLERYDEAINAF-EKAIEINSENSDVWYNKGFTLSQVQRFDEAVEAYRKA 329

Query: 224 EHAEEAMARLVEAYVALA 241
              +      +EAY +L 
Sbjct: 330 VQLD---PEYLEAYSSLG 344


>gi|24216575|ref|NP_714056.1| TPR-repeat-containing protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|45658921|ref|YP_003007.1| hypothetical protein LIC13095 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|24197896|gb|AAN51074.1| TPR-repeat-containing protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|45602166|gb|AAS71644.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 235

 Score = 36.2 bits (83), Expect = 5.2,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 25/75 (33%), Gaps = 2/75 (2%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQ 104
           +  +  +        Y  A+   +  N+ K      +    FP F      S+LM  +  
Sbjct: 33  IDREISSGNEDPELYYNFAICCARTDNYKKCVSILEELLEKFPRFGE-RENSILMIVYAL 91

Query: 105 YSAGKYQQAASLGEE 119
               +Y +A    EE
Sbjct: 92  IQNKEYSKALDKCEE 106


>gi|300214429|gb|ADJ78845.1| Putative uncharacterized protein [Lactobacillus salivarius CECT
           5713]
          Length = 295

 Score = 36.2 bits (83), Expect = 5.2,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 25/71 (35%), Gaps = 12/71 (16%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY----SAGKYQQA 113
            E+Y +A    K ++++KA +   +            K    + +  +        Y  A
Sbjct: 2   SELYFQAEEAYKNKDYTKARKLLEK--------EYLEKKTFRTNYFLFLVFLKIEDYIAA 53

Query: 114 ASLGEEYITQY 124
                EYI QY
Sbjct: 54  YETANEYIRQY 64


>gi|291279148|ref|YP_003495983.1| hypothetical protein DEFDS_0748 [Deferribacter desulfuricans SSM1]
 gi|290753850|dbj|BAI80227.1| hypothetical protein [Deferribacter desulfuricans SSM1]
          Length = 313

 Score = 36.2 bits (83), Expect = 5.2,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 28/70 (40%), Gaps = 9/70 (12%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
            +  A +     S  F        +    +   Y+ G+Y+++ +L +     YP  + + 
Sbjct: 230 RYKDAVKLLEPISDKF------IDAKFYLSLAYYNIGEYEKSLNLLKNIEKIYPNKRRL- 282

Query: 132 YVYYLVGMSY 141
             Y+L+G  Y
Sbjct: 283 --YFLLGKVY 290


>gi|228917613|ref|ZP_04081156.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
          thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|228842037|gb|EEM87141.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
          thuringiensis serovar pulsiensis BGSC 4CC1]
          Length = 273

 Score = 36.2 bits (83), Expect = 5.2,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 25/66 (37%)

Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
           +Q+ K  LT   S ++  L     + + +  L          E+ EKA   L+++    
Sbjct: 1  MFQMKKLLLTALISTSIFGLAACGGKDNDEKKLVVGASNVPHAEILEKAKPLLEKKGIEL 60

Query: 76 AYEYFN 81
            + F 
Sbjct: 61 EVKKFQ 66


>gi|228930008|ref|ZP_04093019.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
          thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|228829688|gb|EEM75314.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
          thuringiensis serovar pondicheriensis BGSC 4BA1]
          Length = 273

 Score = 36.2 bits (83), Expect = 5.2,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 25/66 (37%)

Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
           +Q+ K  LT   S ++  L     + + +  L          E+ EKA   L+++    
Sbjct: 1  MFQMKKLLLTALISTSIFGLAACGGKDNDEKKLVVGASNVPHAEILEKAKPLLEKKGIEL 60

Query: 76 AYEYFN 81
            + F 
Sbjct: 61 EVKKFQ 66


>gi|209526842|ref|ZP_03275362.1| Clp domain protein [Arthrospira maxima CS-328]
 gi|209492713|gb|EDZ93048.1| Clp domain protein [Arthrospira maxima CS-328]
          Length = 402

 Score = 36.2 bits (83), Expect = 5.2,   Method: Composition-based stats.
 Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 9/97 (9%)

Query: 175 VKGARFYVTVGRNQLAAKEVE-IG----RYYLKRGEYVAAI-PRFQLVLANYSDAEHAEE 228
            +GA     + +  LA  E++ IG      Y K  E  AA+  RFQ V+          E
Sbjct: 289 AEGAIDAANILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVPETIE 348

Query: 229 AMARLVEAYV---ALALMDEAREVVSLIQERYPQGYW 262
            +  L E Y     L ++DEA E  + + +RY    +
Sbjct: 349 ILYGLRERYEQHHKLKIIDEALEAAAKLSDRYISDRY 385


>gi|225552373|ref|ZP_03773313.1| TPR domain protein [Borrelia sp. SV1]
 gi|225371371|gb|EEH00801.1| TPR domain protein [Borrelia sp. SV1]
          Length = 379

 Score = 36.2 bits (83), Expect = 5.2,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 71/212 (33%), Gaps = 36/212 (16%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           K+ N+ KA  Y+ +C    P       +L        +   Y++A  + EEY+   PE+ 
Sbjct: 70  KKNNYDKAIVYYQKCLVKHPSNNY---ALFGLGDCYRNLDNYKKATDIWEEYLKYDPENI 126

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV--------KGARF 180
               V   V  SY ++           +   Q   +++E   ++ Y            + 
Sbjct: 127 T---VLTRVAASYRKL--------NNFQKSKQTYLKVMELMPDNDYALVGIGHLYYDFKE 175

Query: 181 YVTVGRNQLAAKEVE-----------IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
           Y    +  L   E+            IG  Y K  E+   I  F+  L     +     A
Sbjct: 176 YKEALKYWLKMYELNQSKVDVRVLTSIGNCYRKLREFTRGIYFFKKALEI---SPSNFYA 232

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +  L + Y       EA +    I E+ P+  
Sbjct: 233 VFGLADCYRGNKEYKEALKYWLDIIEKDPKNN 264


>gi|189485379|ref|YP_001956320.1| hypothetical protein TGRD_376 [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|170287338|dbj|BAG13859.1| conserved hypothetical protein [uncultured Termite group 1
           bacterium phylotype Rs-D17]
          Length = 251

 Score = 36.2 bits (83), Expect = 5.2,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 29/83 (34%), Gaps = 11/83 (13%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC----SRDFPFAGVARKSLLMSAFVQYSA 107
            + RY+ ++   A    K+ NFSK  E +         + P+           +   Y  
Sbjct: 24  AENRYKTQI-ANAEESFKKSNFSKTIEIYESLVQIEKVNNPYIYY------NLSNAYYRN 76

Query: 108 GKYQQAASLGEEYITQYPESKNV 130
           G   +A    E+ +   P  + +
Sbjct: 77  GNLGKAILNMEKALRLAPRDREI 99


>gi|119487755|ref|ZP_01621264.1| TPR repeat protein [Lyngbya sp. PCC 8106]
 gi|119455588|gb|EAW36725.1| TPR repeat protein [Lyngbya sp. PCC 8106]
          Length = 998

 Score = 36.2 bits (83), Expect = 5.2,   Method: Composition-based stats.
 Identities = 37/257 (14%), Positives = 71/257 (27%), Gaps = 47/257 (18%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            I        L     +  +++ L            Y  A  + ++  ++KA ++F    
Sbjct: 407 AIAIYQTALTLNPEAVEVQQNLNLAEAAKENPAPIYYTFAQQYYQQGKYNKAIQFFQNYL 466

Query: 85  RDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
              P      A       +       + Q+A  + +     +P S          G  + 
Sbjct: 467 ELQPGEVELYAT-----LSDCFNQIHQPQEAIKVLQTGTQVHPTS----------GQLHF 511

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
            +I  +   Q  T+  +           N  Y      ++ V    +     E   YY K
Sbjct: 512 SLILQLLR-QGETEAAISQAETAFNYLPN-DYTFKLLKHLIV---PIIYHHPESINYYRK 566

Query: 203 RGEYVAAIPRFQLVLANYSDAE-----HAEEAMARLVE------AYVALALMDEAREVV- 250
           R E        Q +               E A   L        AY A  +++  +    
Sbjct: 567 RFE--------QELQTLIQTTRLETPAERESAFWGLSRWTNFYLAYQAHNVVESQKNYGN 618

Query: 251 ---SLIQERYPQGYWAR 264
              +++   YP   W +
Sbjct: 619 LVHNIMAANYPN--WVK 633


>gi|90414945|ref|ZP_01222908.1| hypothetical protein P3TCK_06967 [Photobacterium profundum 3TCK]
 gi|90323945|gb|EAS40543.1| hypothetical protein P3TCK_06967 [Photobacterium profundum 3TCK]
          Length = 390

 Score = 36.2 bits (83), Expect = 5.2,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 21/58 (36%), Gaps = 8/58 (13%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA--FVQYSAGKYQQAASLGEE 119
           A L L+E ++ KA     +           +++ +  A     Y    + +A    ++
Sbjct: 314 AQLLLQEGHYHKALTELERVKDK------TKRADVELAKVRAYYKLEDFDRAIIHAKQ 365


>gi|83814130|ref|YP_445326.1| TPR repeat-containing protein [Salinibacter ruber DSM 13855]
 gi|83755524|gb|ABC43637.1| tetratricopeptide repeat domain protein [Salinibacter ruber DSM
           13855]
          Length = 191

 Score = 36.2 bits (83), Expect = 5.2,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 59/180 (32%), Gaps = 30/180 (16%)

Query: 68  LKEQNFSKAYEY------FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            ++ NF +A +           + D+        +   +A   Y   +Y +A +  + + 
Sbjct: 31  YEQGNFQQALDGTGDRAGLLAIADDYGGTDAGNLATFYAANALYQRDEYDRALTYYQRFE 90

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                    D+    +G S       +   + + +       +   +Y        A  Y
Sbjct: 91  K------EKDF----IGASAYAAQAAIQETRGSFERAGGLYEQAASQY---QNKLTAPRY 137

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
           +           +  G+ Y + G+Y AAI  ++ +   Y D+E A  A   L  A V   
Sbjct: 138 L-----------LNAGQAYEEAGQYEAAIGVYERIQEEYPDSEQASNAERYLARAKVHQG 186


>gi|110056|pir||S14538 transition protein - mouse
          Length = 411

 Score = 36.2 bits (83), Expect = 5.2,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 35/84 (41%), Gaps = 2/84 (2%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFS 74
             +++   L    ++A+C L      ++ +    ++  D   ++ ++ +    L   +F 
Sbjct: 264 MQKVHALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFD 323

Query: 75  KAYEYFNQCSRDFPFAGVARKSLL 98
            A   F +  + +P +  A K+ L
Sbjct: 324 LARADFQKVLQLYP-SNKAAKTQL 346



 Score = 35.9 bits (82), Expect = 5.6,   Method: Composition-based stats.
 Identities = 18/146 (12%), Positives = 43/146 (29%), Gaps = 30/146 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARK-------SLLMSAFVQYSAGK 109
           E+   + KE  + +A   + +      +         +K       S L  A        
Sbjct: 228 ERGTAYFKEGKYKQALLQYKKIVSWLEYESSFSGEEMQKVHALRLASHLNLAMCHLKLQA 287

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           +  A     + +     ++      +  G ++   + D                ++++ Y
Sbjct: 288 FSAAIESCNKALELDSNNEKG---LFRRGEAHL-AVNDFDL-------ARADFQKVLQLY 336

Query: 170 TNSPYVKGARFYVTVG----RNQLAA 191
            ++     A+  + V     R QLA 
Sbjct: 337 PSNK---AAKTQLAVCQQRTRRQLAR 359


>gi|326625359|gb|EGE31704.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
          Length = 1143

 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     E  +++A E   +     P +        
Sbjct: 429 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 485

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156
             +   + AG++ QA +       Q P      Y Y  YL G            D    +
Sbjct: 486 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 532

Query: 157 LMLQYMSRIVERYTNSPY 174
             L +++ +      S +
Sbjct: 533 AALAHLNTL----PTSQW 546


>gi|326431071|gb|EGD76641.1| tetratricopeptide protein [Salpingoeca sp. ATCC 50818]
          Length = 753

 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 64/231 (27%), Gaps = 53/231 (22%)

Query: 60  VYEK-AVLFLKEQNFSKAYEYFNQ--------CSRDFPFAGVARKSLLMSAFVQYSAGKY 110
           +Y    +    +  + KA  ++ +             P       S        +S G+Y
Sbjct: 216 LYNNLGIANYSKGKYEKAIAFYEKALAITVEVLGEKHPSTADTYNS---LGAAYHSKGEY 272

Query: 111 QQAASLGE-----EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
            +A    E        T   +      +Y  +  +Y          Q+    +   +  +
Sbjct: 273 AKAIQQYENALAIRLETLGKKHPKTADIYNNLSAAYHSKGEYATAIQQYENALAIRLETL 332

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP--------RFQLVL 217
            E++ N+              N L       G  Y   G+Y  AI         R + + 
Sbjct: 333 GEKHPNTADT----------YNNL-------GSVYSSEGQYDKAIHFHEKALAIRVETLG 375

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEA--------REVVSLIQERYPQG 260
             +S    A   +     AY      D+A             ++ E++P  
Sbjct: 376 EKHSRTASAYLGLGL---AYQRKGDYDKAIHFHEKDLAITAEVLGEKHPST 423


>gi|288803010|ref|ZP_06408446.1| putative TPR domain protein [Prevotella melaninogenica D18]
 gi|288334527|gb|EFC72966.1| putative TPR domain protein [Prevotella melaninogenica D18]
          Length = 1152

 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 22/54 (40%)

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           A    + V  NY D E  ++    L   Y+       A   V+ + +++P+  W
Sbjct: 600 AEKALRRVSDNYPDYEQMDDVYYHLYLLYMRKNEPQVAENYVTRLIQKFPKSKW 653


>gi|284037591|ref|YP_003387521.1| hypothetical protein Slin_2706 [Spirosoma linguale DSM 74]
 gi|283816884|gb|ADB38722.1| TPR repeat-containing protein [Spirosoma linguale DSM 74]
          Length = 928

 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 35/83 (42%), Gaps = 16/83 (19%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFN---QCSRDFPF------AGVARKSLLMSAFVQYSAGKY 110
            Y    ++  + ++  A + F      ++ +P       +  A       AF+ Y+ G Y
Sbjct: 111 YYNLGRIYGDQTHYRLAIQAFTNAVAIAKQYPEKWTSGASAYAE-----IAFIYYNIGDY 165

Query: 111 QQAASLGEE--YITQYPESKNVD 131
           ++AA++ +E  +++Q      + 
Sbjct: 166 EKAANVAQEGFFLSQRANDPKMA 188


>gi|297568570|ref|YP_003689914.1| protein of unknown function DUF181 [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296924485|gb|ADH85295.1| protein of unknown function DUF181 [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 600

 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 26/76 (34%), Gaps = 7/76 (9%)

Query: 60  VYEKAVLFLKE-QNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +Y      LK+  ++ +A E   +    D       +    M  F  Y    YQ A S  
Sbjct: 477 IYAYMGESLKDMGDYQQAIEVLRRGIEHD----EERQDIHNMLGFCHYKLADYQSAVSHF 532

Query: 118 EEYITQYPESKNVDYV 133
              I   P S  +D+ 
Sbjct: 533 ARAIELEPGS-AIDFA 547


>gi|150020214|ref|YP_001305568.1| TPR repeat-containing protein [Thermosipho melanesiensis BI429]
 gi|149792735|gb|ABR30183.1| Tetratricopeptide TPR_2 repeat protein [Thermosipho melanesiensis
           BI429]
          Length = 513

 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 66/220 (30%), Gaps = 35/220 (15%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY------SAGKYQQA 113
            YEK    L  QN+  A E   +          A+  L    +  Y        G Y+ A
Sbjct: 62  YYEKFKEHLNAQNYEDAREILEK----------AKNVLYDYRYHFYYGLLFSKLGDYENA 111

Query: 114 ASLGEEYITQYPESKNVDYV-YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV------ 166
               +  +   P      Y+ YY +G     + ++     +      +            
Sbjct: 112 EVELKRSLAMNPNF----YLGYYELGNLLY-LKKEYDDAIQMYLKAFEINKEFSLPLLKM 166

Query: 167 --ERYTNSPYVK-GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
               + N  +      +   +   +L+   + +G  Y    ++  A   F+  L+     
Sbjct: 167 GDAYFENGQFKDAEIAYKTALKVEKLSQIYLRLGVLYNSIQKFEKAEKIFREGLS----V 222

Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
           E+  E    L      L    +A +V+  + + +P     
Sbjct: 223 EYKPEIAYNLAYTLSRLGKHFQALQVLKELSKNFPSTEVY 262


>gi|118480069|ref|YP_897220.1| ABC transporter substrate-binding protein [Bacillus thuringiensis
          str. Al Hakam]
 gi|228936282|ref|ZP_04099081.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
          thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|228948710|ref|ZP_04110988.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
          thuringiensis serovar monterrey BGSC 4AJ1]
 gi|229124520|ref|ZP_04253705.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
          cereus 95/8201]
 gi|118419294|gb|ABK87713.1| ABC transporter, substrate-binding protein [Bacillus
          thuringiensis str. Al Hakam]
 gi|228658860|gb|EEL14515.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
          cereus 95/8201]
 gi|228811017|gb|EEM57360.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
          thuringiensis serovar monterrey BGSC 4AJ1]
 gi|228823398|gb|EEM69231.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
          thuringiensis serovar andalousiensis BGSC 4AW1]
          Length = 273

 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 25/66 (37%)

Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
           +Q+ K  LT   S ++  L     + + +  L          E+ EKA   L+++    
Sbjct: 1  MFQMKKLLLTALISTSIFGLAACGGKDNDEKKLVVGASNVPHAEILEKAKPLLEKKGIEL 60

Query: 76 AYEYFN 81
            + F 
Sbjct: 61 EVKKFQ 66


>gi|307720885|ref|YP_003892025.1| von Willebrand factor A [Sulfurimonas autotrophica DSM 16294]
 gi|306978978|gb|ADN09013.1| von Willebrand factor type A [Sulfurimonas autotrophica DSM 16294]
          Length = 515

 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 24/58 (41%), Gaps = 7/58 (12%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +KA  + +++ + KA +++ + +   P +          A   Y   KY +A    + 
Sbjct: 329 QKAHSYYEQKQYEKAIQHYKELT---PTSE----VNYNIANALYKQHKYLKAVISYKR 379


>gi|297691489|ref|XP_002823117.1| PREDICTED: transmembrane and TPR repeat-containing protein 1-like
           isoform 1 [Pongo abelii]
          Length = 944

 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 52/155 (33%), Gaps = 30/155 (19%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP-YDQRAT 155
           LL + +       + +A    ++ +   P+   V        +S     +     +Q   
Sbjct: 818 LLSAIYS--KQENHDKALDAIDKALQLKPKDPKV--------ISELFFTKGNQLREQNLL 867

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVG-RNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
               +     V+   +      A+ ++ +G    +             +G+YV+A   ++
Sbjct: 868 DKAFESYRVAVQLNPD-----QAQAWMNMGGIQHI-------------KGKYVSARAYYE 909

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
             L    D++  +E +A+L      L  + E  + 
Sbjct: 910 RALQLVPDSKLLKENLAKLDRLEKRLQEVREKDQT 944


>gi|296127775|ref|YP_003635027.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
 gi|296019591|gb|ADG72828.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
          Length = 468

 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 61/190 (32%), Gaps = 36/190 (18%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            +A+  +  +  + A +Y      +           +    + Y   +Y  A     + I
Sbjct: 110 ARALDKIDRKEEALA-QYLTLLKEN----DYKLIVDIEIGTIYYKNRQYDTAIKYFSDAI 164

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
              P +             +  M              +  MS + ++  + P        
Sbjct: 165 DIQPNNSE---ALKYKAFCFVNM--------GNYNEAISIMSNVYKKMPDDP-------- 205

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
                N        +GR Y  R +Y  AI R+  V  +Y D E+A +++  +   Y+ L 
Sbjct: 206 ---ILN------YNLGRAYKGRDDYKTAI-RYYSV--SYKDKEYAVKSLYEMGLCYIKLE 253

Query: 242 LMDEAREVVS 251
            ++ A + + 
Sbjct: 254 NIESAIKTLE 263


>gi|293396640|ref|ZP_06640916.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
 gi|291420904|gb|EFE94157.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
          Length = 507

 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 45/131 (34%), Gaps = 29/131 (22%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           +  L  ++ ++ +A E+F       P         L      Y AG +  AAS       
Sbjct: 336 QGQLAFRQGHYQRAAEHF-----QQP---------LWQGIAYYRAGDFTAAASA------ 375

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
            +  +   + + +L G SYAQ        Q+  +  +    R +    +    +  R  +
Sbjct: 376 FHQATPTAETLLWL-GNSYAQ--------QKQWQQAINSYDRALSLQPDWQIARHNRAEI 426

Query: 183 TVGRNQLAAKE 193
                +L  +E
Sbjct: 427 AKIIMKLRQQE 437


>gi|290985397|ref|XP_002675412.1| predicted protein [Naegleria gruberi]
 gi|284089008|gb|EFC42668.1| predicted protein [Naegleria gruberi]
          Length = 228

 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 6/80 (7%)

Query: 49  DSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYS 106
           + V +      +Y +  V+ L+ + + KA E F++    +  F+     + L      + 
Sbjct: 128 NKVIEESPDYLIYSRRGVVHLESKEYLKAIEDFSKSIELNSKFST----AYLSRGSAYHQ 183

Query: 107 AGKYQQAASLGEEYITQYPE 126
            G+Y+ A     E I   P 
Sbjct: 184 NGEYENAIKDFTEAIKLEPT 203


>gi|281208890|gb|EFA83065.1| signal recognition particle 72 kDa subunit [Polysphondylium
           pallidum PN500]
          Length = 636

 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 42/111 (37%), Gaps = 17/111 (15%)

Query: 20  YKFALTIFFSIA-------VCFLVGWERQSSRDVYLD-----SVTDVRYQREVYEKAVLF 67
           YK AL +F  I         C ++     SS    LD     +    + +  ++EKA   
Sbjct: 24  YKKALRVFLLINKADVEAFQCKVICLMFNSSFQEALDCLKNAASPSTQSEPMLFEKAYCL 83

Query: 68  LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
                +++A E  ++  +         +   + A + Y   KYQ+  ++ E
Sbjct: 84  YSLAKYNEALELIDKLKQQ-----KTLRVQELEAQIYYKLEKYQKTIAIYE 129


>gi|226311501|ref|YP_002771395.1| hypothetical protein BBR47_19140 [Brevibacillus brevis NBRC 100599]
 gi|226094449|dbj|BAH42891.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 674

 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 16/131 (12%), Positives = 42/131 (32%), Gaps = 29/131 (22%)

Query: 135 YL-VGMSYAQMIRDVPYDQRATK-------LMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
           YL    +   +  D+   Q                  +++    ++              
Sbjct: 288 YLAKAHALYALDPDLIRLQGEYFLRTGNKNRAFHTFDQLIRLDPDNIDAY---------- 337

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
                  +   R +L++G+   AI   + +L    +     +A + L + Y+ L   ++A
Sbjct: 338 -------LYRARLFLEKGDATDAIKDCEEILTRMPE---LWDARSLLGKGYLQLGEWEKA 387

Query: 247 REV-VSLIQER 256
           ++V   ++   
Sbjct: 388 QKVFQEILSHN 398


>gi|188994860|ref|YP_001929112.1| TPR domain protein [Porphyromonas gingivalis ATCC 33277]
 gi|188594540|dbj|BAG33515.1| TPR domain protein [Porphyromonas gingivalis ATCC 33277]
          Length = 393

 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 49/161 (30%), Gaps = 29/161 (18%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           ++     A   + + S  FP +    +  L + +V   AG+  +A  +      Q   + 
Sbjct: 112 RQGRADDAVRLYEEMSEQFP-SEDELRFKLANMYV--QAGEIDKAIYIYNRMEAQN--AV 166

Query: 129 NVDYVYYLVGMSYAQMIR-DVPYDQRATKLMLQYMSRIVERYT--------------NSP 173
           N          S    IR  +      T   L  + R+  R+               +S 
Sbjct: 167 NAADA------SNYAEIRARLYLMTGQTNKALNELRRLCNRFPEVNEFRLKYAGTLLDSE 220

Query: 174 YVKGARFYVTVG--RNQLAA-KEVEIGRYYLKRGEYVAAIP 211
               A   + +    +  +      +  YYL   E  AAI 
Sbjct: 221 KYDEAYEQLQLIARTDSTSGLYHFAMASYYLGTNEKEAAIN 261


>gi|200389197|ref|ZP_03215809.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|199606295|gb|EDZ04840.1| cellulose synthase operon protein C [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
          Length = 1143

 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     E  +++A E   +     P +        
Sbjct: 429 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 485

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156
             +   + AG++ QA +       Q P      Y Y  YL G            D    +
Sbjct: 486 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 532

Query: 157 LMLQYMSRIVERYTNSPY 174
             L +++ +      S +
Sbjct: 533 AALAHLNTL----PTSQW 546


>gi|189425402|ref|YP_001952579.1| hypothetical protein Glov_2343 [Geobacter lovleyi SZ]
 gi|189421661|gb|ACD96059.1| hypothetical protein Glov_2343 [Geobacter lovleyi SZ]
          Length = 756

 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 55/151 (36%), Gaps = 46/151 (30%)

Query: 57  QREVYEKAVLFLKEQNFSK-AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           +R+ +E A   ++ ++  K A E F +  +            L +A V         +  
Sbjct: 297 ERQDFESARTVMQGESAQKQAKELFAEIYQQ----------ELENARV---------SIP 337

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYA--QMIRDVPYDQRATKLMLQ------YMSRIVE 167
             ++++  YPES          G++    Q+I  +  D +A K           M + V 
Sbjct: 338 ALQKFMASYPES----------GLADKSRQLINGLEGD-KAWKNRYAGKHDAPSMKKFVT 386

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
            Y +S Y++ A   +          E+ + +
Sbjct: 387 NYPHSLYLEEANKRIR-------RSELAVAK 410


>gi|118444334|ref|YP_877536.1| hypothetical protein NT01CX_1455 [Clostridium novyi NT]
 gi|118134790|gb|ABK61834.1| TPR domain protein [Clostridium novyi NT]
          Length = 458

 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 33/81 (40%), Gaps = 7/81 (8%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            E  +K    L+++ + +A  Y+ +     P    A+        V +   +Y++A    
Sbjct: 69  EEYRKKGNNALEKKQYRRAILYYKKILLIEPKITFAKN---KLGLVFFYNKQYEEAIIQF 125

Query: 118 EEYITQYPESK----NVDYVY 134
            E I   P++     N+ YVY
Sbjct: 126 RELIQINPKNSIFYNNLAYVY 146


>gi|78777126|ref|YP_393441.1| calcium-binding EF-hand [Sulfurimonas denitrificans DSM 1251]
 gi|78497666|gb|ABB44206.1| Calcium-binding EF-hand [Sulfurimonas denitrificans DSM 1251]
          Length = 431

 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 24/69 (34%), Gaps = 7/69 (10%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM--SAFVQYSAGKYQQAASLGE 118
           Y+ A+     + F+KAY  F + S   P       + L            +Y +A +  +
Sbjct: 23  YKDAIQSYNAKEFAKAYPVFEELSLKSP-----ANAELNFFLGRSALELKRYDEALTAFD 77

Query: 119 EYITQYPES 127
             +   P  
Sbjct: 78  RVLMLNPSH 86


>gi|197364444|ref|YP_002144081.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|56129775|gb|AAV79281.1| putative TPR-repeat-containing protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197095921|emb|CAR61500.1| putative TPR-repeat-containing protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
          Length = 1143

 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     E  +++A E   +     P +        
Sbjct: 429 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 485

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156
             +   + AG++ QA +       Q P      Y Y  YL G            D    +
Sbjct: 486 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 532

Query: 157 LMLQYMSRIVERYTNSPY 174
             L +++ +      S +
Sbjct: 533 AALAHLNTL----PTSQW 546


>gi|327401541|ref|YP_004342380.1| hypothetical protein Arcve_1665 [Archaeoglobus veneficus SNP6]
 gi|327317049|gb|AEA47665.1| Tetratricopeptide TPR_1 repeat-containing protein [Archaeoglobus
           veneficus SNP6]
          Length = 222

 Score = 36.2 bits (83), Expect = 5.4,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 64/194 (32%), Gaps = 37/194 (19%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           ++++EKA   +  +N  +  E+F++C    P        L       Y  G+  +A S  
Sbjct: 6   QKLFEKA---MNARNPEEEVEFFSKCLEMEPENIY---VLNNLGIALYELGRIDEAISYI 59

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           +  +   P   +    +Y  G+  +        D       +    + +    +      
Sbjct: 60  DRALELNP---DYADAWYNRGIVLS--------DAGKYDEAIACFEKAIALNPD------ 102

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
                    +  A   + +   Y + G    AI  ++  ++   D EHA  A   +  AY
Sbjct: 103 ---------DAAAWNNMGLA--YYESGNMGKAIECYRKCVSI--DEEHAA-AWYNMGLAY 148

Query: 238 VALALMDEAREVVS 251
                 ++A E   
Sbjct: 149 YESGRFNKAEESFK 162


>gi|298251766|ref|ZP_06975569.1| ATP-dependent DNA helicase, RecQ family [Ktedonobacter racemifer
           DSM 44963]
 gi|297546358|gb|EFH80226.1| ATP-dependent DNA helicase, RecQ family [Ktedonobacter racemifer
           DSM 44963]
          Length = 3126

 Score = 36.2 bits (83), Expect = 5.4,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 36/86 (41%), Gaps = 3/86 (3%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           +     ++++     + ++A L+ K + +++A   F Q            ++L+      
Sbjct: 3   EDDNTDISEIDESDAILKEAQLYYKRREYNQALHAFEQILSR---NATTVEALIGKGNCL 59

Query: 105 YSAGKYQQAASLGEEYITQYPESKNV 130
              G +++A    +E I+  P+S + 
Sbjct: 60  RKQGYHREAIDTFDEAISINPQSIDA 85


>gi|283779948|ref|YP_003370703.1| hypothetical protein Psta_2170 [Pirellula staleyi DSM 6068]
 gi|283438401|gb|ADB16843.1| Tetratricopeptide TPR_2 repeat protein [Pirellula staleyi DSM 6068]
          Length = 438

 Score = 36.2 bits (83), Expect = 5.4,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 77/217 (35%), Gaps = 22/217 (10%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL-KEQNFSKAYEYFNQCSRDF 87
           +++  F        + D    S    +   +VY  A   L  +  F +A   +++  +  
Sbjct: 95  AVSGAFSSKPNGDVTEDPVSLSTKPKKVGPDVYVAAARLLENQGKFEEAQAQYDKALKV- 153

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
             +     +L+  A +    G+  +A  L  + I  +PES      Y  +G+ YA+  +D
Sbjct: 154 --SPKDLNTLVSLARMYDRQGQSAKAVELYRKAIAAHPES---GMAYNDLGLCYARQ-KD 207

Query: 148 VPYDQRATKLMLQ-------YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
           +P         ++       Y + +      +     A   ++    Q  A    +G  Y
Sbjct: 208 LPQSMANLHKAVELQPANVKYRNNLATVQVEAGRADEAIKTLSAVNPQAVAH-YNVG--Y 264

Query: 201 L---KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
           L   K     AA    + V  +    + A E +A+L 
Sbjct: 265 LLEQKGNAQGAAQHMARAVELD-PSMQAAREMLAKLE 300


>gi|238783663|ref|ZP_04627683.1| Glycosyl transferase, family 2 [Yersinia bercovieri ATCC 43970]
 gi|238715376|gb|EEQ07368.1| Glycosyl transferase, family 2 [Yersinia bercovieri ATCC 43970]
          Length = 1265

 Score = 36.2 bits (83), Expect = 5.4,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 42/126 (33%), Gaps = 33/126 (26%)

Query: 135  YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
            YL G+            Q         ++++   Y ++             +  L     
Sbjct: 1117 YLKGL----------RSQERYLEAEAILNKLPIEYFDN-------------KELL----F 1149

Query: 195  EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
            E G        + A+   +  +L  Y      + A  RL  +Y  L +++EA  ++ + +
Sbjct: 1150 EAGENCYSMRRWDASAKIWLQLLNEY------DIANYRLAYSYRMLGMIEEAMTLLKISK 1203

Query: 255  ERYPQG 260
              +P+ 
Sbjct: 1204 NTFPES 1209


>gi|254414341|ref|ZP_05028108.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC
           7420]
 gi|196179016|gb|EDX74013.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC
           7420]
          Length = 717

 Score = 36.2 bits (83), Expect = 5.4,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 45/127 (35%), Gaps = 18/127 (14%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           +  Y    Y + +  ++ +  + A    ++ +   P    A ++ L    + +  G    
Sbjct: 343 NPDYAEAWYMQGLALMQGEQPNAAIACLDKATALKP--DYA-QAWLYRGHLLFQLGHLAD 399

Query: 113 AASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           A +  ++  T  P     DY   + + G++  Q+ R            +  + R+VE Y 
Sbjct: 400 AIASCQQATTLQP-----DYVEAWSIQGIALMQLQR--------PHEAIACLDRVVELYP 446

Query: 171 NSPYVKG 177
             P    
Sbjct: 447 EHPEAWK 453


>gi|145516292|ref|XP_001444040.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124411440|emb|CAK76643.1| unnamed protein product [Paramecium tetraurelia]
          Length = 681

 Score = 36.2 bits (83), Expect = 5.4,   Method: Composition-based stats.
 Identities = 12/111 (10%), Positives = 38/111 (34%), Gaps = 13/111 (11%)

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
           ++    ++L    +     G++ +A +   + I   P + +     Y  G+   ++    
Sbjct: 570 YSQENTRTLNNRGYCLAKLGQFDEAIADYTKAIKLDPVNIH---AIYNRGICNERI---- 622

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
                  +  ++  S+++     +     A F      + +   ++ I  Y
Sbjct: 623 ----GEFRKAIEDFSQVIHL--QNDQGANAYFNRGCCYDNIGEMDLAIADY 667



 Score = 35.1 bits (80), Expect = 9.8,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 62/195 (31%), Gaps = 50/195 (25%)

Query: 62  EKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
            +     K+++F KA E++         F     KS+    F       Y  A S   + 
Sbjct: 274 SQGFEARKKEDFIKAIEFYTMALM----FNPNHFKSIFNRGFAFDKLRMYNDAISDYTKA 329

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           I    +SKN  Y YY  G+SY +             L ++  ++ +E    S        
Sbjct: 330 IEL--DSKNA-YAYYNRGISYDKK--------GDYNLAIKDFAKSIELDP-SK------- 370

Query: 181 YVTVGRNQLAAKEVEIGRYY------LKRGEYV-AAIPRFQLVLANYSDAEHAEEAMARL 233
                             +Y      +K+   +  AI  F   +    D  H  +A    
Sbjct: 371 ----------------ADFYHNKGFAMKKKNLIKEAILEFNECIRL--DKNHF-KAYYNR 411

Query: 234 VEAYVALALMDEARE 248
              Y  L   D+A++
Sbjct: 412 ANCYEKLGDFDKAQQ 426


>gi|156740598|ref|YP_001430727.1| hypothetical protein Rcas_0580 [Roseiflexus castenholzii DSM 13941]
 gi|156231926|gb|ABU56709.1| TPR repeat-containing protein [Roseiflexus castenholzii DSM 13941]
          Length = 319

 Score = 36.2 bits (83), Expect = 5.4,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 41/120 (34%), Gaps = 14/120 (11%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y + ++ ++  + + A E F+   R  P       +L   A + Y+ G    A +  +  
Sbjct: 172 YRQGLILVRLNDRTAAREAFDAAIRARPQH---VDALYERALLHYAVGDLNAALADLDTA 228

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +     S      YY  G+        + + Q   +  +    + +    + P    AR 
Sbjct: 229 LRL---SPRAANAYYARGL--------IRHTQGDPRSAIADFGQALLLRPDYPEALIARA 277


>gi|111115017|ref|YP_709635.1| hypothetical protein BAPKO_0197 [Borrelia afzelii PKo]
 gi|110890291|gb|ABH01459.1| conserved hypothetical protein [Borrelia afzelii PKo]
          Length = 379

 Score = 36.2 bits (83), Expect = 5.4,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 68/212 (32%), Gaps = 36/212 (16%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           K+ N+ KA  Y+ +C    P       +L        +   Y++A  + EEY+   PE+ 
Sbjct: 70  KKNNYDKAIVYYQRCLIKHPNNNY---ALFGLGDCYRNLDNYKKATDIWEEYLKYDPEN- 125

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV--------KGARF 180
                     ++    +       +  +   Q   +++E    + Y            + 
Sbjct: 126 ----------ITVLTRVASSYRKLKNFQKSKQTYLKVMELMPENDYALVGIGHLYYDFKE 175

Query: 181 YVTVGRNQLAAKEVE-----------IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
           Y    +  L   E+            IG  Y K  E+   I  F+  L     +     A
Sbjct: 176 YKEALKYWLKMYELNQSKVDVRVLTSIGNCYRKLREFTRGIYFFKKALEI---SPSNFYA 232

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +  L + Y       EA +    I E+ P+  
Sbjct: 233 IFGLADCYRGNKEYKEALKYWLDIIEKDPKNN 264


>gi|189499558|ref|YP_001959028.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeobacteroides
           BS1]
 gi|189494999|gb|ACE03547.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeobacteroides
           BS1]
          Length = 571

 Score = 36.2 bits (83), Expect = 5.4,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 41/105 (39%), Gaps = 6/105 (5%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK--AVLFLKEQNFSKAYEYFNQCSR 85
           FS+A  F V   +  S   + +    ++ +   Y +  A ++   + + +A   F Q + 
Sbjct: 81  FSLAKAF-VALTKPDSAQYHAEKAVTLQPENRFYRQLLAGIYFDMKYYDRAAVQFEQLAE 139

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
            FP      K+L   A    +  KY  A +     +   P ++N 
Sbjct: 140 RFPS---KTKTLFFLAHAYLADEKYADALNTFLRILQHDPSNENA 181



 Score = 35.9 bits (82), Expect = 5.8,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 48/154 (31%), Gaps = 30/154 (19%)

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           ++ +  A          ++ S  ++ ++  PE+        L  ++Y    R        
Sbjct: 430 QAHITLAMAYDRLQDQLKSISAYKDVLSLDPEN-----ALALNNLAYLYAERG-----EN 479

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
               ++Y    VE   ++P       ++                 Y K GEY  A    +
Sbjct: 480 LNEAIEYAKTAVESDPDNPVYLDTLGWL-----------------YYKTGEYGKAREYLE 522

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
             LA   D     +    L E Y AL     A+E
Sbjct: 523 KALAKDPDEPEIYD---HLAEIYRALGKETRAKE 553


>gi|284039246|ref|YP_003389176.1| hypothetical protein Slin_4396 [Spirosoma linguale DSM 74]
 gi|283818539|gb|ADB40377.1| Tetratricopeptide TPR_2 repeat protein [Spirosoma linguale DSM 74]
          Length = 602

 Score = 36.2 bits (83), Expect = 5.4,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 63/194 (32%), Gaps = 33/194 (17%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK-----SLLMSAFVQYSAGKYQQAAS 115
           Y      L ++ + +A +   +  +    +          + L         G Y ++  
Sbjct: 417 YSNGSANLYKRRYQQAVDALEESQKLLAASSSNELKKGISAQL--GDAYNGLGDYAKSNE 474

Query: 116 LGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
             E  +   P +   DYV   Y    SY   +R     +      LQ   ++VER   + 
Sbjct: 475 SYEAVLKVDPLN---DYVLNNY----SYFLSLRKENLPR-----ALQLAQKLVERNPTNA 522

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
                  +V        +K+    + YL+             ++ +Y D      A+ +L
Sbjct: 523 TYLDTYAWVLYV-----SKDYAKAKQYLE-KALADPANVSGTIIEHYGD------ALYQL 570

Query: 234 VEAYVALALMDEAR 247
            +A  AL    +A+
Sbjct: 571 GQADKALEQWKKAK 584


>gi|145521857|ref|XP_001446778.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124414267|emb|CAK79381.1| unnamed protein product [Paramecium tetraurelia]
          Length = 860

 Score = 36.2 bits (83), Expect = 5.4,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 43/111 (38%), Gaps = 14/111 (12%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           +    ++ Q + +A + F Q  R  P      ++L  S   QY +  +++A    E +  
Sbjct: 551 RGKANMQTQQYDEALQDFEQVIRLEPNNH---QALFESGQAQYMSSNFEKA---CEMFGK 604

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
               +  ++   Y +  + A  ++D        K  ++Y+   + ++    
Sbjct: 605 ALVIAPEIE--QYHIKRAIALSLQDFD------KEAIEYLKDAINQFPEFE 647


>gi|124002217|ref|ZP_01687071.1| tetratricopeptide repeat domain protein [Microscilla marina ATCC
           23134]
 gi|123992683|gb|EAY32028.1| tetratricopeptide repeat domain protein [Microscilla marina ATCC
           23134]
          Length = 336

 Score = 36.2 bits (83), Expect = 5.4,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 22/60 (36%), Gaps = 9/60 (15%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
            ++ ++  +   + NF++A   F    +       A          A   YS  +Y++A 
Sbjct: 28  NDLLKQGRVENSKGNFNEAIAIFQQALKIDSQHTIATY------ELANSYYSNKEYEKAL 81


>gi|118362595|ref|XP_001014524.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89296291|gb|EAR94279.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 604

 Score = 36.2 bits (83), Expect = 5.4,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 45/125 (36%), Gaps = 14/125 (11%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           + + +   Y      ++ Q + ++ EY  +     P      ++    A++     KY Q
Sbjct: 482 NQQSEELYYYVGFALIQLQKYDESIEYLIKALELNP--NY-DQAYQQLAYIFNIKQKYDQ 538

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A    ++ I   P +   D VYY +G +Y +           T L +    + ++   N+
Sbjct: 539 AIQFSQKAIEINPNN---DSVYYQLGWAYEKSY--------LTPLAIDSYKKSLQINPNN 587

Query: 173 PYVKG 177
                
Sbjct: 588 KDSAE 592


>gi|157829317|gb|ABV82609.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 55 [Homo sapiens]
          Length = 788

 Score = 36.2 bits (83), Expect = 5.5,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|320199628|gb|EFW74218.1| putative membrane protein [Escherichia coli EC4100B]
          Length = 248

 Score = 36.2 bits (83), Expect = 5.5,   Method: Composition-based stats.
 Identities = 18/155 (11%), Positives = 49/155 (31%), Gaps = 23/155 (14%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS--AFVQYS 106
           + +      +  Y+ A    + + + +A  ++ Q          A ++ +M   A  Q++
Sbjct: 78  EELAIAETNQNHYQLANELARLERYHEAVPHYQQALS----GIFAHEAAMMLSLAQAQFA 133

Query: 107 AGKYQQAASLGEEYITQYPESKNVD-YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
             ++       E+ +   P+ ++ D ++ +   ++           Q            +
Sbjct: 134 IQEFAACQQTLEDVMRYNPDFQSADGHLLFARALA----------AQEKYADAESEFEVL 183

Query: 166 VERYTNSP---YVKGARFYVTVGRNQLAAKEVEIG 197
           V  Y       Y       ++  R    A E  + 
Sbjct: 184 VSYYPGPQARIYYAEMLEKMSRLRE---ANEQYVA 215


>gi|313201929|ref|YP_004040587.1| hypothetical protein MPQ_2203 [Methylovorus sp. MP688]
 gi|312441245|gb|ADQ85351.1| TPR repeat-containing protein [Methylovorus sp. MP688]
          Length = 400

 Score = 36.2 bits (83), Expect = 5.5,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 33/90 (36%), Gaps = 11/90 (12%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAG 108
             + +    ++ + V+        +A + F + +  +P         ++L   +     G
Sbjct: 51  AKNPKSVDALFLRGVILTDSGKRDEAMKAFTEMTEKYPALPEPYNNLAVL---YA--ERG 105

Query: 109 KYQQAASLGEEYITQYP----ESKNVDYVY 134
           +Y +A    E  I  +P      +N+  +Y
Sbjct: 106 EYDKARQALESAIKTHPSYATAHENLGDIY 135


>gi|293414612|ref|ZP_06657261.1| yciM protein [Escherichia coli B185]
 gi|291434670|gb|EFF07643.1| yciM protein [Escherichia coli B185]
          Length = 389

 Score = 36.2 bits (83), Expect = 5.5,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 62/186 (33%), Gaps = 36/186 (19%)

Query: 64  AVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
              ++    + +A + FNQ     DF    + +   +  A       ++Q+A  + E  +
Sbjct: 114 GRDYMAAGLYDRAEDMFNQLTDETDFRIGALQQLLQIYQA-----TSEWQKAIDVAERLV 168

Query: 122 TQYPESKNVDYVYYL--VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
               + + V+  ++   + + +     D+       K              NS       
Sbjct: 169 KLGKDKQRVEIAHFYCELALQHM-ASDDLDRAMTLLKKGAAADK-------NS------- 213

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                     A   + +GR ++ +GEY  A+   Q V++   D E   E +  L   Y  
Sbjct: 214 ----------ARVSIMMGRVFMAKGEYAKAVESLQRVIS--QDRELVSETLEMLQTCYQQ 261

Query: 240 LALMDE 245
           L    E
Sbjct: 262 LGKTAE 267


>gi|322421635|ref|YP_004200858.1| TPR repeat-containing protein [Geobacter sp. M18]
 gi|320128022|gb|ADW15582.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacter sp.
           M18]
          Length = 406

 Score = 36.2 bits (83), Expect = 5.5,   Method: Composition-based stats.
 Identities = 24/164 (14%), Positives = 47/164 (28%), Gaps = 31/164 (18%)

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
            Y    Y +A+S  +  I+  P +                 + +    Q+     ++   
Sbjct: 39  YYQKKDYSRASSEFKRAISLDPTNAQ-----------SYNYLANAYLAQKKYDDAIKTYR 87

Query: 164 RIVERYT--NSPYVKGARFYVTVGRNQLAAKEVEIG---------------RYYLKRGEY 206
             +      +S +      Y+   +  LA KE +                 + YL+ G Y
Sbjct: 88  NSLTLDPTQDSVHTNLGNIYLQQKKYNLAEKEFKAAAKLNPTDTLAPYTLGQLYLQTGRY 147

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
             A  +F+ V        +       L   Y       EA + +
Sbjct: 148 AEAETQFKKVSKMAPTDPNPY---YSLGATYNKEGKYAEAVKQL 188


>gi|302345210|ref|YP_003813563.1| tetratricopeptide repeat protein [Prevotella melaninogenica ATCC
           25845]
 gi|302149062|gb|ADK95324.1| tetratricopeptide repeat protein [Prevotella melaninogenica ATCC
           25845]
          Length = 1172

 Score = 36.2 bits (83), Expect = 5.5,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 22/54 (40%)

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           A    + V  NY D E  ++    L   Y+       A   V+ + +++P+  W
Sbjct: 613 AEKALRRVSDNYPDYEQMDDVYYHLYLLYMRKNEPQVAENYVTRLSQKFPKSKW 666


>gi|262199073|ref|YP_003270282.1| lytic transglycosylase catalytic [Haliangium ochraceum DSM 14365]
 gi|262082420|gb|ACY18389.1| Lytic transglycosylase catalytic [Haliangium ochraceum DSM 14365]
          Length = 797

 Score = 36.2 bits (83), Expect = 5.5,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 70/236 (29%), Gaps = 34/236 (14%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-KYQQ 112
            R     Y  A    +     +A  ++   +   P +   +K+             + + 
Sbjct: 196 TRRAEARYRLAQALDQRTQIGEALTHYRTLTIHVPLSSWGQKAQ-ERIDALLPTQPESEN 254

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV-----------PYDQRATKLMLQY 161
           A       I     S+ +       GM+Y   +R+              D   ++  +  
Sbjct: 255 AR------IRSMNASEYIA-----RGMAYFDAMRNPLSEADFAAALSTSDITPSEHCVAA 303

Query: 162 MSRIVERYTNSPYVKGARFYVTVGR---------NQLAAKEVEIGRYYLKRGEYVAAIPR 212
             R    +  +   K A                 +       + GR Y   G++  AI R
Sbjct: 304 FHRAQSVF-KARDRKRAAPLFDEAIAACASAHNLDLQVKSAYQAGRSYAFEGQHQIAIAR 362

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
           +Q          + ++A  R  E Y +L   D    +++ I E+YP+G        
Sbjct: 363 YQQAETIDPSHTYVDDARLRQAEEYTSLDDQDTVTLLLASIPEKYPEGDMRAEALW 418


>gi|216263769|ref|ZP_03435763.1| TPR domain protein [Borrelia afzelii ACA-1]
 gi|215979813|gb|EEC20635.1| TPR domain protein [Borrelia afzelii ACA-1]
          Length = 379

 Score = 36.2 bits (83), Expect = 5.5,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 68/212 (32%), Gaps = 36/212 (16%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           K+ N+ KA  Y+ +C    P       +L        +   Y++A  + EEY+   PE+ 
Sbjct: 70  KKNNYDKAIVYYQRCLIKHPNNNY---ALFGLGDCYRNLDNYKKATDIWEEYLKYDPEN- 125

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV--------KGARF 180
                     ++    +       +  +   Q   +++E    + Y            + 
Sbjct: 126 ----------ITVLTRVASSYRKLKNFQKSKQTYLKVMELMPENDYALVGIGHLYYDFKE 175

Query: 181 YVTVGRNQLAAKEVE-----------IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
           Y    +  L   E+            IG  Y K  E+   I  F+  L     +     A
Sbjct: 176 YKEALKYWLKMYELNQSKVDVRVLTSIGNCYRKLREFTRGIYFFKKALEI---SPSNFYA 232

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +  L + Y       EA +    I E+ P+  
Sbjct: 233 IFGLADCYRGNKEYKEALKYWLDIIEKDPKNN 264


>gi|154502750|ref|ZP_02039810.1| hypothetical protein RUMGNA_00564 [Ruminococcus gnavus ATCC 29149]
 gi|153796633|gb|EDN79053.1| hypothetical protein RUMGNA_00564 [Ruminococcus gnavus ATCC 29149]
          Length = 399

 Score = 36.2 bits (83), Expect = 5.5,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 31/90 (34%), Gaps = 11/90 (12%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM--SAFVQYSAGKYQQAASLGEE 119
            K    L+ + +  A +YF            A+++      A       +  +A S+   
Sbjct: 132 AKGYDALQMKEYQTAEKYFK-----HAIGKNAQRAEAYSGLAETYMEQDEGDEAESVFLS 186

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
            I  YP ++      Y   +S+ +  + + 
Sbjct: 187 AIASYPSNEE----LYRAAISFYEETKQLD 212


>gi|149242440|ref|XP_001526467.1| hypothetical protein LELG_03025 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146450590|gb|EDK44846.1| hypothetical protein LELG_03025 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 740

 Score = 36.2 bits (83), Expect = 5.5,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 38/141 (26%), Gaps = 28/141 (19%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGK 109
           D       Y    + +   +F+ AYE F Q        P              + Y   +
Sbjct: 251 DQSDAHSWYYLGRVHMIRGDFNAAYEAFQQAVNRDSRNP-TFWC-----SIGVLYYQISQ 304

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSY---AQMIRDVPYDQRATKLMLQYMSRIV 166
           Y+ A       I   P    +  V+Y +G  Y      I D           L    +  
Sbjct: 305 YRDALDAYTRAIRLNP---YISEVWYDLGTLYETCNNQISD----------ALDAYRQAE 351

Query: 167 ERYTNSPYVKGARFYVTVGRN 187
                +P++   +  +     
Sbjct: 352 RLDPGNPHI---KARLDQLIK 369


>gi|115529131|gb|AAI24745.1| LOC795096 protein [Danio rerio]
          Length = 445

 Score = 36.2 bits (83), Expect = 5.5,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 46/160 (28%), Gaps = 21/160 (13%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF--NQCSRDFPFAGVARKSLLMSAF 102
               +   +  + + +Y      +K +N  +  +           P         L S F
Sbjct: 210 KTAAEIDPNDLFLQSLYVLKKSEVKGENVDEEIQSLLEKSIETKNPSG-------LSSIF 262

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY------AQMIRDVPYDQRATK 156
             Y     ++    GE     +P S  V     L  ++         M  D    +   +
Sbjct: 263 YYYRNNSTEKGFYEGERVRKHFPTSTKV-----LKIVANLHKWKVYNMKADTEQRENLAR 317

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYV-TVGRNQLAAKEVE 195
             ++    ++  Y +   VK A   +     N   A E+ 
Sbjct: 318 KSIELFEELLTHYPDHLKVKLALASLHEYAHNTEKANEIY 357


>gi|28870275|ref|NP_792894.1| TPR domain-containing protein [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|28853522|gb|AAO56589.1| TPR domain protein [Pseudomonas syringae pv. tomato str. DC3000]
          Length = 389

 Score = 36.2 bits (83), Expect = 5.5,   Method: Composition-based stats.
 Identities = 18/186 (9%), Positives = 59/186 (31%), Gaps = 39/186 (20%)

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           ++ L  A +    G  + A +  +   +  P +           +++ +++      +  
Sbjct: 214 QNQLQLARLYLQTGDLEPAVAALQRATSLDPGNIEA-------ALAHIELLDR----KGQ 262

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ---------LA------------AKE 193
            +      + ++ER   S  ++ A        N          LA              +
Sbjct: 263 AEQARSLFAGLLERNPGSSILQHALGM--WLLNHGQAEFALLSLAKATELAPDNNDYRYD 320

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           + +        E  AA  +   ++    +     +A   L++ +     +   + +++ +
Sbjct: 321 LAVAL--HSLNELEAAQKQLTQIV---QNQPANRKARVLLIQYWKETGQLQNVQILLAEL 375

Query: 254 QERYPQ 259
           +++ P 
Sbjct: 376 EQQNPD 381


>gi|34557949|ref|NP_907764.1| adenylate cyclase [Wolinella succinogenes DSM 1740]
 gi|34483667|emb|CAE10664.1| ADENYLATE CYCLASE [Wolinella succinogenes]
          Length = 713

 Score = 36.2 bits (83), Expect = 5.5,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 16/38 (42%), Gaps = 3/38 (7%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFP---FAGVARK 95
           + +A+   ++  F +A E F +     P   F+    +
Sbjct: 655 FAEALALYRQGRFKEALEVFEKLKAQNPEKLFSLYTER 692


>gi|15801897|ref|NP_287917.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 EDL933]
 gi|15831107|ref|NP_309880.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           Sakai]
 gi|16129241|ref|NP_415796.1| TPR-repeats-containing protein [Escherichia coli str. K-12 substr.
           MG1655]
 gi|26247613|ref|NP_753653.1| tetratricopeptide repeat protein [Escherichia coli CFT073]
 gi|74312348|ref|YP_310767.1| tetratricopeptide repeat-containing protein [Shigella sonnei Ss046]
 gi|89108126|ref|AP_001906.1| hypothetical protein [Escherichia coli str. K-12 substr. W3110]
 gi|91210574|ref|YP_540560.1| tetratricopeptide repeat protein [Escherichia coli UTI89]
 gi|110641515|ref|YP_669245.1| tetratricopeptide repeat protein [Escherichia coli 536]
 gi|157157418|ref|YP_001462579.1| tetratricopeptide repeat protein [Escherichia coli E24377A]
 gi|157160787|ref|YP_001458105.1| tetratricopeptide repeat protein [Escherichia coli HS]
 gi|168749091|ref|ZP_02774113.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4113]
 gi|168755950|ref|ZP_02780957.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4401]
 gi|168762718|ref|ZP_02787725.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4501]
 gi|168769351|ref|ZP_02794358.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4486]
 gi|168775094|ref|ZP_02800101.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4196]
 gi|168784027|ref|ZP_02809034.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4076]
 gi|168788404|ref|ZP_02813411.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC869]
 gi|168799579|ref|ZP_02824586.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC508]
 gi|170020354|ref|YP_001725308.1| tetratricopeptide repeat protein [Escherichia coli ATCC 8739]
 gi|170080959|ref|YP_001730279.1| hypothetical protein ECDH10B_1397 [Escherichia coli str. K-12
           substr. DH10B]
 gi|170683676|ref|YP_001743903.1| tetratricopeptide repeat protein [Escherichia coli SMS-3-5]
 gi|187730544|ref|YP_001880112.1| tetratricopeptide repeat protein [Shigella boydii CDC 3083-94]
 gi|188496187|ref|ZP_03003457.1| tetratricopeptide repeat protein [Escherichia coli 53638]
 gi|191171105|ref|ZP_03032656.1| tetratricopeptide repeat protein [Escherichia coli F11]
 gi|194433842|ref|ZP_03066116.1| tetratricopeptide repeat protein [Shigella dysenteriae 1012]
 gi|194436935|ref|ZP_03069034.1| tetratricopeptide repeat protein [Escherichia coli 101-1]
 gi|195939724|ref|ZP_03085106.1| hypothetical protein EscherichcoliO157_25535 [Escherichia coli
           O157:H7 str. EC4024]
 gi|208811084|ref|ZP_03252917.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4206]
 gi|208816308|ref|ZP_03257487.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4045]
 gi|208821968|ref|ZP_03262288.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4042]
 gi|209396639|ref|YP_002270336.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4115]
 gi|209918521|ref|YP_002292605.1| tetratricopeptide repeat protein [Escherichia coli SE11]
 gi|215486577|ref|YP_002329008.1| tetratricopeptide repeat protein [Escherichia coli O127:H6 str.
           E2348/69]
 gi|217329141|ref|ZP_03445221.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           TW14588]
 gi|218553836|ref|YP_002386749.1| hypothetical protein ECIAI1_1303 [Escherichia coli IAI1]
 gi|218689272|ref|YP_002397484.1| tetratricopeptide repeat protein [Escherichia coli ED1a]
 gi|218694855|ref|YP_002402522.1| tetratricopeptide repeat protein [Escherichia coli 55989]
 gi|227886286|ref|ZP_04004091.1| lipopolysaccharide N-acetylglucosaminyltransferase [Escherichia
           coli 83972]
 gi|237705307|ref|ZP_04535788.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|238900515|ref|YP_002926311.1| hypothetical protein BWG_1111 [Escherichia coli BW2952]
 gi|253773720|ref|YP_003036551.1| tetratricopeptide repeat protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254161360|ref|YP_003044468.1| tetratricopeptide repeat protein [Escherichia coli B str. REL606]
 gi|254792870|ref|YP_003077707.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           TW14359]
 gi|256018471|ref|ZP_05432336.1| tetratricopeptide repeat protein [Shigella sp. D9]
 gi|256023009|ref|ZP_05436874.1| tetratricopeptide repeat protein [Escherichia sp. 4_1_40B]
 gi|260854978|ref|YP_003228869.1| hypothetical protein ECO26_1846 [Escherichia coli O26:H11 str.
           11368]
 gi|260867729|ref|YP_003234131.1| hypothetical protein ECO111_1661 [Escherichia coli O111:H- str.
           11128]
 gi|261224265|ref|ZP_05938546.1| hypothetical protein EscherichiacoliO157_06625 [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261257479|ref|ZP_05950012.1| hypothetical protein EscherichiacoliO157EcO_16902 [Escherichia coli
           O157:H7 str. FRIK966]
 gi|291282369|ref|YP_003499187.1| hypothetical protein G2583_1621 [Escherichia coli O55:H7 str.
           CB9615]
 gi|293433641|ref|ZP_06662069.1| yciM protein [Escherichia coli B088]
 gi|300819007|ref|ZP_07099211.1| tetratricopeptide repeat protein [Escherichia coli MS 107-1]
 gi|300904929|ref|ZP_07122747.1| tetratricopeptide repeat protein [Escherichia coli MS 84-1]
 gi|300919464|ref|ZP_07135965.1| tetratricopeptide repeat protein [Escherichia coli MS 115-1]
 gi|300926666|ref|ZP_07142442.1| tetratricopeptide repeat protein [Escherichia coli MS 182-1]
 gi|300927789|ref|ZP_07143353.1| tetratricopeptide repeat protein [Escherichia coli MS 187-1]
 gi|300948358|ref|ZP_07162464.1| tetratricopeptide repeat protein [Escherichia coli MS 116-1]
 gi|300954528|ref|ZP_07166975.1| tetratricopeptide repeat protein [Escherichia coli MS 175-1]
 gi|300971709|ref|ZP_07171582.1| tetratricopeptide repeat protein [Escherichia coli MS 45-1]
 gi|300971809|ref|ZP_07171643.1| tetratricopeptide repeat protein [Escherichia coli MS 200-1]
 gi|301017636|ref|ZP_07182310.1| tetratricopeptide repeat protein [Escherichia coli MS 69-1]
 gi|301022781|ref|ZP_07186623.1| tetratricopeptide repeat protein [Escherichia coli MS 196-1]
 gi|301046124|ref|ZP_07193299.1| tetratricopeptide repeat protein [Escherichia coli MS 185-1]
 gi|301304377|ref|ZP_07210490.1| tetratricopeptide repeat protein [Escherichia coli MS 124-1]
 gi|301326991|ref|ZP_07220280.1| tetratricopeptide repeat protein [Escherichia coli MS 78-1]
 gi|301647223|ref|ZP_07247042.1| tetratricopeptide repeat protein [Escherichia coli MS 146-1]
 gi|306813694|ref|ZP_07447875.1| tetratricopeptide repeat protein [Escherichia coli NC101]
 gi|307137921|ref|ZP_07497277.1| tetratricopeptide repeat protein [Escherichia coli H736]
 gi|307309965|ref|ZP_07589615.1| tetratricopeptide repeat protein [Escherichia coli W]
 gi|309793245|ref|ZP_07687672.1| tetratricopeptide repeat protein [Escherichia coli MS 145-7]
 gi|312971472|ref|ZP_07785647.1| tetratricopeptide repeat family protein [Escherichia coli 1827-70]
 gi|331641843|ref|ZP_08342978.1| putative heat shock protein [Escherichia coli H736]
 gi|331652323|ref|ZP_08353342.1| putative heat shock protein [Escherichia coli M718]
 gi|331657330|ref|ZP_08358292.1| putative heat shock protein [Escherichia coli TA206]
 gi|331672808|ref|ZP_08373594.1| putative heat shock protein [Escherichia coli TA280]
 gi|331677061|ref|ZP_08377757.1| putative heat shock protein [Escherichia coli H591]
 gi|332279526|ref|ZP_08391939.1| tetratricopeptide repeat protein [Shigella sp. D9]
 gi|77416653|sp|P0AB60|YCIM_ECO57 RecName: Full=Uncharacterized protein yciM; Flags: Precursor
 gi|77416654|sp|P0AB59|YCIM_ECOL6 RecName: Full=Uncharacterized protein yciM; Flags: Precursor
 gi|77416655|sp|P0AB58|YCIM_ECOLI RecName: Full=Uncharacterized protein yciM; Flags: Precursor
 gi|12515512|gb|AAG56533.1|AE005379_1 putative heat shock protein [Escherichia coli O157:H7 str. EDL933]
 gi|26108015|gb|AAN80215.1|AE016760_74 Hypothetical protein yciM precursor [Escherichia coli CFT073]
 gi|1742094|dbj|BAA14834.1| conserved hypothetical protein [Escherichia coli str. K12 substr.
           W3110]
 gi|2367116|gb|AAC74362.1| TPR-repeats-containing protein [Escherichia coli str. K-12 substr.
           MG1655]
 gi|13361318|dbj|BAB35276.1| putative heat shock protein [Escherichia coli O157:H7 str. Sakai]
 gi|73855825|gb|AAZ88532.1| putative heat shock protein [Shigella sonnei Ss046]
 gi|91072148|gb|ABE07029.1| putative heat shock protein [Escherichia coli UTI89]
 gi|110343107|gb|ABG69344.1| hypothetical protein YciM precursor [Escherichia coli 536]
 gi|157066467|gb|ABV05722.1| tetratricopeptide repeat protein [Escherichia coli HS]
 gi|157079448|gb|ABV19156.1| tetratricopeptide repeat protein [Escherichia coli E24377A]
 gi|169755282|gb|ACA77981.1| Tetratricopeptide TPR_2 repeat protein [Escherichia coli ATCC 8739]
 gi|169888794|gb|ACB02501.1| conserved protein [Escherichia coli str. K-12 substr. DH10B]
 gi|170521394|gb|ACB19572.1| tetratricopeptide repeat protein [Escherichia coli SMS-3-5]
 gi|187427536|gb|ACD06810.1| tetratricopeptide repeat protein [Shigella boydii CDC 3083-94]
 gi|187769262|gb|EDU33106.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4196]
 gi|188016626|gb|EDU54748.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4113]
 gi|188491386|gb|EDU66489.1| tetratricopeptide repeat protein [Escherichia coli 53638]
 gi|188998726|gb|EDU67712.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4076]
 gi|189356792|gb|EDU75211.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4401]
 gi|189361584|gb|EDU80003.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4486]
 gi|189367076|gb|EDU85492.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4501]
 gi|189371824|gb|EDU90240.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC869]
 gi|189377972|gb|EDU96388.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC508]
 gi|190908837|gb|EDV68425.1| tetratricopeptide repeat protein [Escherichia coli F11]
 gi|194417945|gb|EDX34040.1| tetratricopeptide repeat protein [Shigella dysenteriae 1012]
 gi|194423918|gb|EDX39906.1| tetratricopeptide repeat protein [Escherichia coli 101-1]
 gi|208724590|gb|EDZ74298.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4206]
 gi|208732956|gb|EDZ81644.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4045]
 gi|208742091|gb|EDZ89773.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4042]
 gi|209158039|gb|ACI35472.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC4115]
 gi|209771898|gb|ACI84261.1| putative heat shock protein [Escherichia coli]
 gi|209771900|gb|ACI84262.1| putative heat shock protein [Escherichia coli]
 gi|209771902|gb|ACI84263.1| putative heat shock protein [Escherichia coli]
 gi|209771904|gb|ACI84264.1| putative heat shock protein [Escherichia coli]
 gi|209771906|gb|ACI84265.1| putative heat shock protein [Escherichia coli]
 gi|209911780|dbj|BAG76854.1| putative heat shock protein [Escherichia coli SE11]
 gi|215264649|emb|CAS09020.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
 gi|217317580|gb|EEC26008.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           TW14588]
 gi|218351587|emb|CAU97299.1| conserved hypothetical protein [Escherichia coli 55989]
 gi|218360604|emb|CAQ98162.1| conserved hypothetical protein [Escherichia coli IAI1]
 gi|218426836|emb|CAR07688.2| conserved hypothetical protein [Escherichia coli ED1a]
 gi|222033086|emb|CAP75826.1| Uncharacterized protein yciM [Escherichia coli LF82]
 gi|226900064|gb|EEH86323.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|227836490|gb|EEJ46956.1| lipopolysaccharide N-acetylglucosaminyltransferase [Escherichia
           coli 83972]
 gi|238860472|gb|ACR62470.1| conserved protein [Escherichia coli BW2952]
 gi|253324764|gb|ACT29366.1| Tetratricopeptide domain protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253973261|gb|ACT38932.1| hypothetical protein ECB_01257 [Escherichia coli B str. REL606]
 gi|253977475|gb|ACT43145.1| hypothetical protein ECD_01257 [Escherichia coli BL21(DE3)]
 gi|254592270|gb|ACT71631.1| conserved protein [Escherichia coli O157:H7 str. TW14359]
 gi|257753627|dbj|BAI25129.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368]
 gi|257764085|dbj|BAI35580.1| conserved predicted protein [Escherichia coli O111:H- str. 11128]
 gi|260449588|gb|ACX40010.1| Tetratricopeptide domain protein [Escherichia coli DH1]
 gi|290762242|gb|ADD56203.1| hypothetical protein G2583_1621 [Escherichia coli O55:H7 str.
           CB9615]
 gi|291324460|gb|EFE63882.1| yciM protein [Escherichia coli B088]
 gi|294493956|gb|ADE92712.1| tetratricopeptide repeat protein [Escherichia coli IHE3034]
 gi|299881082|gb|EFI89293.1| tetratricopeptide repeat protein [Escherichia coli MS 196-1]
 gi|300301857|gb|EFJ58242.1| tetratricopeptide repeat protein [Escherichia coli MS 185-1]
 gi|300309315|gb|EFJ63835.1| tetratricopeptide repeat protein [Escherichia coli MS 200-1]
 gi|300318503|gb|EFJ68287.1| tetratricopeptide repeat protein [Escherichia coli MS 175-1]
 gi|300400130|gb|EFJ83668.1| tetratricopeptide repeat protein [Escherichia coli MS 69-1]
 gi|300403078|gb|EFJ86616.1| tetratricopeptide repeat protein [Escherichia coli MS 84-1]
 gi|300411195|gb|EFJ94733.1| tetratricopeptide repeat protein [Escherichia coli MS 45-1]
 gi|300413486|gb|EFJ96796.1| tetratricopeptide repeat protein [Escherichia coli MS 115-1]
 gi|300417332|gb|EFK00643.1| tetratricopeptide repeat protein [Escherichia coli MS 182-1]
 gi|300452119|gb|EFK15739.1| tetratricopeptide repeat protein [Escherichia coli MS 116-1]
 gi|300464182|gb|EFK27675.1| tetratricopeptide repeat protein [Escherichia coli MS 187-1]
 gi|300528468|gb|EFK49530.1| tetratricopeptide repeat protein [Escherichia coli MS 107-1]
 gi|300840364|gb|EFK68124.1| tetratricopeptide repeat protein [Escherichia coli MS 124-1]
 gi|300846374|gb|EFK74134.1| tetratricopeptide repeat protein [Escherichia coli MS 78-1]
 gi|301074585|gb|EFK89391.1| tetratricopeptide repeat protein [Escherichia coli MS 146-1]
 gi|305852968|gb|EFM53413.1| tetratricopeptide repeat protein [Escherichia coli NC101]
 gi|306909683|gb|EFN40177.1| tetratricopeptide repeat protein [Escherichia coli W]
 gi|307553341|gb|ADN46116.1| tetratricopeptide repeat protein [Escherichia coli ABU 83972]
 gi|307627143|gb|ADN71447.1| tetratricopeptide repeat protein [Escherichia coli UM146]
 gi|308122832|gb|EFO60094.1| tetratricopeptide repeat protein [Escherichia coli MS 145-7]
 gi|309701580|emb|CBJ00887.1| tetratricopeptide repeat protein [Escherichia coli ETEC H10407]
 gi|310336069|gb|EFQ01269.1| tetratricopeptide repeat family protein [Escherichia coli 1827-70]
 gi|312945917|gb|ADR26744.1| tetratricopeptide repeat protein [Escherichia coli O83:H1 str. NRG
           857C]
 gi|313848615|emb|CAQ31785.2| conserved protein [Escherichia coli BL21(DE3)]
 gi|315060533|gb|ADT74860.1| Predicted N-acetylglucosaminyl transferase [Escherichia coli W]
 gi|315135918|dbj|BAJ43077.1| hypothetical protein ECDH1ME8569_1221 [Escherichia coli DH1]
 gi|315254320|gb|EFU34288.1| tetratricopeptide repeat protein [Escherichia coli MS 85-1]
 gi|315289121|gb|EFU48519.1| tetratricopeptide repeat protein [Escherichia coli MS 110-3]
 gi|315295312|gb|EFU54642.1| tetratricopeptide repeat protein [Escherichia coli MS 153-1]
 gi|315297196|gb|EFU56476.1| tetratricopeptide repeat protein [Escherichia coli MS 16-3]
 gi|315619361|gb|EFU99905.1| tetratricopeptide repeat family protein [Escherichia coli 3431]
 gi|320177284|gb|EFW52289.1| tetratricopeptide repeat protein [Shigella dysenteriae CDC 74-1112]
 gi|320189967|gb|EFW64619.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           EC1212]
 gi|320195705|gb|EFW70330.1| tetratricopeptide repeat protein [Escherichia coli WV_060327]
 gi|320199316|gb|EFW73907.1| tetratricopeptide repeat protein [Escherichia coli EC4100B]
 gi|320637177|gb|EFX07003.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           G5101]
 gi|320642543|gb|EFX11791.1| tetratricopeptide repeat protein [Escherichia coli O157:H- str.
           493-89]
 gi|320647896|gb|EFX16604.1| tetratricopeptide repeat protein [Escherichia coli O157:H- str. H
           2687]
 gi|320653498|gb|EFX21603.1| tetratricopeptide repeat protein [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320659198|gb|EFX26787.1| tetratricopeptide repeat protein [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320663991|gb|EFX31178.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323153286|gb|EFZ39544.1| tetratricopeptide repeat family protein [Escherichia coli EPECa14]
 gi|323172362|gb|EFZ57999.1| tetratricopeptide repeat family protein [Escherichia coli LT-68]
 gi|323179766|gb|EFZ65327.1| tetratricopeptide repeat family protein [Escherichia coli 1180]
 gi|323187513|gb|EFZ72822.1| tetratricopeptide repeat family protein [Escherichia coli RN587/1]
 gi|323378905|gb|ADX51173.1| tetratricopeptide repeat protein [Escherichia coli KO11]
 gi|323942397|gb|EGB38567.1| TPR repeat-containing protein [Escherichia coli E482]
 gi|323947437|gb|EGB43441.1| TPR repeat-containing protein [Escherichia coli H120]
 gi|323953847|gb|EGB49648.1| TPR repeat-containing protein [Escherichia coli H263]
 gi|323962582|gb|EGB58162.1| TPR repeat-containing protein [Escherichia coli H489]
 gi|323973478|gb|EGB68664.1| TPR repeat-containing protein [Escherichia coli TA007]
 gi|324006106|gb|EGB75325.1| tetratricopeptide repeat protein [Escherichia coli MS 57-2]
 gi|324011303|gb|EGB80522.1| tetratricopeptide repeat protein [Escherichia coli MS 60-1]
 gi|324018891|gb|EGB88110.1| tetratricopeptide repeat protein [Escherichia coli MS 117-3]
 gi|324117526|gb|EGC11432.1| TPR repeat-containing protein [Escherichia coli E1167]
 gi|326341058|gb|EGD64851.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           1125]
 gi|326343298|gb|EGD67065.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str.
           1044]
 gi|331038641|gb|EGI10861.1| putative heat shock protein [Escherichia coli H736]
 gi|331050601|gb|EGI22659.1| putative heat shock protein [Escherichia coli M718]
 gi|331055578|gb|EGI27587.1| putative heat shock protein [Escherichia coli TA206]
 gi|331070029|gb|EGI41398.1| putative heat shock protein [Escherichia coli TA280]
 gi|331075750|gb|EGI47048.1| putative heat shock protein [Escherichia coli H591]
 gi|332091675|gb|EGI96755.1| tetratricopeptide repeat family protein [Shigella boydii 5216-82]
 gi|332098116|gb|EGJ03089.1| tetratricopeptide repeat family protein [Shigella dysenteriae
           155-74]
 gi|332101878|gb|EGJ05224.1| tetratricopeptide repeat protein [Shigella sp. D9]
 gi|332342874|gb|AEE56208.1| conserved hypothetical protein [Escherichia coli UMNK88]
          Length = 389

 Score = 36.2 bits (83), Expect = 5.5,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 62/186 (33%), Gaps = 36/186 (19%)

Query: 64  AVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
              ++    + +A + FNQ     DF    + +   +  A       ++Q+A  + E  +
Sbjct: 114 GRDYMAAGLYDRAEDMFNQLTDETDFRIGALQQLLQIYQA-----TSEWQKAIDVAERLV 168

Query: 122 TQYPESKNVDYVYYL--VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
               + + V+  ++   + + +     D+       K              NS       
Sbjct: 169 KLGKDKQRVEIAHFYCELALQHM-ASDDLDRAMTLLKKGAAADK-------NS------- 213

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                     A   + +GR ++ +GEY  A+   Q V++   D E   E +  L   Y  
Sbjct: 214 ----------ARVSIMMGRVFMAKGEYAKAVESLQRVIS--QDRELVSETLEMLQTCYQQ 261

Query: 240 LALMDE 245
           L    E
Sbjct: 262 LGKTAE 267


>gi|297559491|ref|YP_003678465.1| XRE family transcriptional regulator [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296843939|gb|ADH65959.1| transcriptional regulator, XRE family [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 401

 Score = 35.9 bits (82), Expect = 5.5,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 24/64 (37%), Gaps = 2/64 (3%)

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR--LVEAYVALALMDEAR 247
           A  EV   R Y +    + A+P    VL  Y      E A+    L  AY      +EA 
Sbjct: 294 AELEVMDSRVYTELRRPLRAVPLLSRVLREYPATSTRERALYESWLAVAYADANEPEEAA 353

Query: 248 EVVS 251
            V +
Sbjct: 354 RVAA 357


>gi|296505576|ref|YP_003667276.1| TPR repeat-containing protein [Bacillus thuringiensis BMB171]
 gi|296326628|gb|ADH09556.1| TPR repeat-containing protein [Bacillus thuringiensis BMB171]
          Length = 467

 Score = 35.9 bits (82), Expect = 5.5,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 76/224 (33%), Gaps = 53/224 (23%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           E+A  +++     +A       ++D+P  ++G         A   + +G   +A  L E 
Sbjct: 119 EEANRYIRNGQLEEAIATLEIVTKDYPEFWSGHN-----NLAIAHFQSGNVDKALKLTEM 173

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS------- 172
            + + P +        +  +    +     Y     K +     ++V  Y  S       
Sbjct: 174 ILEKNPGN--------IHALCNTLIFL---YSIGEHKQVEALAGQLVSVYPISFEHRLKL 222

Query: 173 -------PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA--------AIPRFQLVL 217
                   Y + A  +  + + Q    E ++  YY     Y A        A   +Q V+
Sbjct: 223 GTTLATIGYFEHAYKWFKLLKRQ--GYEGDVSFYYWF--AYSAYMVKDQQLAEKMWQYVV 278

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVV-SLIQERYPQG 260
             + D +          E + AL L DE + V+   +++ + Q 
Sbjct: 279 ELHPDKKG--------KEPWNALNLADEGQNVLFEELRKSFQQS 314


>gi|296314211|ref|ZP_06864152.1| putative periplasmic protein [Neisseria polysaccharea ATCC 43768]
 gi|296839110|gb|EFH23048.1| putative periplasmic protein [Neisseria polysaccharea ATCC 43768]
          Length = 237

 Score = 35.9 bits (82), Expect = 5.5,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 7/57 (12%)

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
             RF+       D+  A EAM ++ E    L   D AR     + + YP    A+  
Sbjct: 181 ANRFK-------DSPTAPEAMFKIGECQYRLQQKDIARATWLSLIQTYPSSPAAKRA 230


>gi|297588230|ref|ZP_06946873.1| LemA family protein [Finegoldia magna ATCC 53516]
 gi|297573603|gb|EFH92324.1| LemA family protein [Finegoldia magna ATCC 53516]
          Length = 184

 Score = 35.9 bits (82), Expect = 5.5,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 25/71 (35%), Gaps = 7/71 (9%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
             L  M+ +VERY        +  + T   ++LA  E  I     +R  Y   +  +   
Sbjct: 96  KALNGMNVVVERYPE----LKSDAHFTQLMDELAGSENRIA---TERKNYNTVVKSYNQK 148

Query: 217 LANYSDAEHAE 227
           +  +     A 
Sbjct: 149 VKRFPTVIFAR 159


>gi|196013896|ref|XP_002116808.1| hypothetical protein TRIADDRAFT_60819 [Trichoplax adhaerens]
 gi|190580526|gb|EDV20608.1| hypothetical protein TRIADDRAFT_60819 [Trichoplax adhaerens]
          Length = 1372

 Score = 35.9 bits (82), Expect = 5.5,   Method: Composition-based stats.
 Identities = 21/162 (12%), Positives = 54/162 (33%), Gaps = 34/162 (20%)

Query: 59  EVYEK-AVLFLKEQNFSKAYEYFNQ--------CSRDFPFAGVARKSLLMSAFVQYSAGK 109
           ++Y    + ++ +   ++A   + +           + P   VA +S      V  +  K
Sbjct: 624 KLYSNIGLAYMHQGKHNEAIAMYEKSLKIRMSVLDCNHP--DVA-QSYDNMGDVYSNQNK 680

Query: 110 YQQAASLGEEYITQ------YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
           Y++A SL  + +        +    ++              I ++ Y+Q   +  ++   
Sbjct: 681 YEEAISLYNKSLDIKLSVLDH-SHPDIA--------ISYSNIANIYYNQSKHEEAIRMYE 731

Query: 164 RIVE------RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
           + ++       Y + P V      +    N  +  E  I  +
Sbjct: 732 KSLKIQLSAVGY-DHPDVAKLYNNMGAIYNDQSKHEEAIAMF 772


>gi|114645545|ref|XP_520818.2| PREDICTED: transmembrane and TPR repeat-containing protein 1
           isoform 2 [Pan troglodytes]
          Length = 882

 Score = 35.9 bits (82), Expect = 5.5,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 52/155 (33%), Gaps = 30/155 (19%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP-YDQRAT 155
           LL + +       + +A    ++ +   P+   V        +S     +     +Q   
Sbjct: 756 LLSAIYS--KQENHDKALDAIDKALQLKPKDPKV--------ISELFFTKGNQLREQNLL 805

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVG-RNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
               +     V+   +      A+ ++ +G    +             +G+YV+A   ++
Sbjct: 806 DKAFESYRVAVQLNPD-----QAQAWMNMGGIQHI-------------KGKYVSARAYYE 847

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
             L    D++  +E +A+L      L  + E  + 
Sbjct: 848 RALQLVPDSKLLKENLAKLDRLEKRLQEVREKDQT 882


>gi|86606649|ref|YP_475412.1| TPR repeat-containing protein [Synechococcus sp. JA-3-3Ab]
 gi|86555191|gb|ABD00149.1| tetratricopeptide repeat protein [Synechococcus sp. JA-3-3Ab]
          Length = 272

 Score = 35.9 bits (82), Expect = 5.5,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 70/208 (33%), Gaps = 50/208 (24%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLG 117
           ++E+A       +F++A  +++Q  +  P      + +        + S  + Q+A    
Sbjct: 45  LFEEAFAATNRGDFARAEAFWSQLLQRQPDNPALWSNR-----GNARVSQNRLQEALEDY 99

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
            E I   P + +  Y      ++    +  +       +  +    R+++   N      
Sbjct: 100 AEAIRLAPNAPD-PY------LNRGTALEGLGR----WQEAIADYERVLQLDPN-----D 143

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD-AEHAEEAMARLVEA 236
           A                     Y  RG   AA+  +Q  LA+Y    E A +      +A
Sbjct: 144 AAA-------------------YNNRGNAEAALGEWQQALADYRRATELAPD--YAFAQA 182

Query: 237 YVAL-----ALMDEAREVVSLIQERYPQ 259
             AL        + A  ++  +  +YP+
Sbjct: 183 NYALCLYQVGETEAALRLMRALVRKYPK 210


>gi|300865558|ref|ZP_07110337.1| TPR repeat-containing protein [Oscillatoria sp. PCC 6506]
 gi|300336430|emb|CBN55487.1| TPR repeat-containing protein [Oscillatoria sp. PCC 6506]
          Length = 176

 Score = 35.9 bits (82), Expect = 5.5,   Method: Composition-based stats.
 Identities = 22/146 (15%), Positives = 52/146 (35%), Gaps = 30/146 (20%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM---------SAFV 103
           +    +E YE   ++++++ +++A   F +  +       ++   +            F 
Sbjct: 48  EKGTAQEYYELGSIYVEKKLYAQATSLFQKALK-------SKDLQVEEDAAIIYNALGFA 100

Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
            +   +Y  A    +E I   P     DYV  L  +++    +      + T   L+   
Sbjct: 101 HFGQEQYDIAIRQYKEAIRLKP-----DYVTALNNLAHTYERK------KLTTQALEMYE 149

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQL 189
             ++   N+P    A+      R +L
Sbjct: 150 ESLKLEPNNP---TAKRRSESLRKRL 172


>gi|229199131|ref|ZP_04325814.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
          cereus m1293]
 gi|228584402|gb|EEK42537.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
          cereus m1293]
          Length = 273

 Score = 35.9 bits (82), Expect = 5.5,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 25/66 (37%)

Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
           +Q+ K  LT   S ++  L     + + +  L          E+ EKA   L+++    
Sbjct: 1  MFQMKKLLLTALISTSIFGLAACGGKDNDEKKLVVGASNVPHAEILEKAKPLLEKKGIEL 60

Query: 76 AYEYFN 81
            + F 
Sbjct: 61 EVKKFQ 66


>gi|302036814|ref|YP_003797136.1| hypothetical protein NIDE1468 [Candidatus Nitrospira defluvii]
 gi|190343228|gb|ACE75616.1| exported protein [Candidatus Nitrospira defluvii]
 gi|300604878|emb|CBK41211.1| exported protein of unknown function, TPR-like [Candidatus
           Nitrospira defluvii]
          Length = 554

 Score = 35.9 bits (82), Expect = 5.5,   Method: Composition-based stats.
 Identities = 37/247 (14%), Positives = 79/247 (31%), Gaps = 54/247 (21%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           Y F +T+   +A+  L    +    D  +           +  + +L    + + +A   
Sbjct: 21  YFFTVTVLTIVAMALLPCSIQAQEPDAEV-----------LVAEGILAYDAKRYEEAISL 69

Query: 80  FNQCSRDFPFAGVARKSL--LMSAFVQYSAGKYQQAASLGEEYITQY---PESKNVDYVY 134
           F+Q     P     R++      A    + G+ +QA +      T +   P   +   V 
Sbjct: 70  FSQAVARDP-----RQARGFYYLALSHLARGQAEQAIAPL---TTLHVLRPSDLD---VT 118

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
           Y +G ++           R        +  +  +  +              R  L     
Sbjct: 119 YQLGTAHFA--------VRQYDKAAPLLEEVFRQEPD--------------RENLG---F 153

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
            +G     + +Y +A     + ++  SD++  + A+     A   L L D+A   ++  Q
Sbjct: 154 YVGLLRYHQKDYDSAAAALSVNVS--SDSDLRQLALFYRGLALGVLGLSDQALSELASAQ 211

Query: 255 ERYPQGY 261
              P   
Sbjct: 212 RVQPSSP 218


>gi|145591788|ref|YP_001153790.1| TPR repeat-containing protein [Pyrobaculum arsenaticum DSM 13514]
 gi|145283556|gb|ABP51138.1| Tetratricopeptide TPR_2 repeat protein [Pyrobaculum arsenaticum DSM
           13514]
          Length = 637

 Score = 35.9 bits (82), Expect = 5.5,   Method: Composition-based stats.
 Identities = 9/70 (12%), Positives = 21/70 (30%), Gaps = 4/70 (5%)

Query: 30  IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN----QCSR 85
           IA   L   +  S++ +  +    +      Y  A    +  ++ +A  Y      +   
Sbjct: 550 IASVALAAADLTSAKRILPNCDCPILKVSVAYHIARSAYESGDYQEAIRYLELALAELKA 609

Query: 86  DFPFAGVARK 95
             P      +
Sbjct: 610 QDPRYEYTPQ 619


>gi|150402060|ref|YP_001329354.1| hypothetical protein MmarC7_0133 [Methanococcus maripaludis C7]
 gi|150033090|gb|ABR65203.1| TPR repeat-containing protein [Methanococcus maripaludis C7]
          Length = 393

 Score = 35.9 bits (82), Expect = 5.5,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 67/207 (32%), Gaps = 56/207 (27%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           +Y+  + +K    +  + F++A + + +  +    +    +         Y+  +Y++A 
Sbjct: 143 KYKDVLAKKGTALVGLRKFNEALDIYEKILKI---SPYDTQVWKNIGNAFYTVKRYEKAI 199

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
              + Y++++  +       + V +S    +R +      T   L   ++++E + NS  
Sbjct: 200 QFYDMYLSEHKNN-------FQVTLSKGDALRKLGK----TNEALDLYTKVLENHINSHE 248

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
                      R         +G  Y +  +Y                    E A+  L 
Sbjct: 249 P--------WCR---------VGLLYYENKDY--------------------ETALYYLE 271

Query: 235 EAYVALALMDE-----AREVVSLIQER 256
            AY    L        AR  + L    
Sbjct: 272 LAYERNPLNPSILVKIARTYIKLKNYN 298


>gi|118444627|ref|YP_877240.1| hypothetical protein NT01CX_1157 [Clostridium novyi NT]
 gi|118135083|gb|ABK62127.1| TPR-repeat-containing protein [Clostridium novyi NT]
          Length = 427

 Score = 35.9 bits (82), Expect = 5.5,   Method: Composition-based stats.
 Identities = 23/148 (15%), Positives = 46/148 (31%), Gaps = 21/148 (14%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQN-FSKAYEYFNQC----SRDFPFAGVARKSLLMS 100
           V  + +      +  Y     +L+  N   +A     +     S  + +  +    L M 
Sbjct: 296 VKSEDILKDDGVKHFYNTGREYLEANNKVEEAVSNLQKAYDYGSDSYLYGHI----LFML 351

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
                +      A    EEY  +Y     +  V Y   + Y    +DV           +
Sbjct: 352 GVSYQNKKDISNALKCYEEYEAKYSNENYIQEVLYRTAILY----KDVNL-----NKSKE 402

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           Y  ++++ Y +  Y   A   +    N+
Sbjct: 403 YAKKLMDNYPDCQY---ANSKIKDILNK 427


>gi|221068956|ref|ZP_03545061.1| pyruvate phosphate dikinase PEP/pyruvate-binding [Comamonas
           testosteroni KF-1]
 gi|220713979|gb|EED69347.1| pyruvate phosphate dikinase PEP/pyruvate-binding [Comamonas
           testosteroni KF-1]
          Length = 658

 Score = 35.9 bits (82), Expect = 5.5,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 19/57 (33%), Gaps = 6/57 (10%)

Query: 128 KNVDYVYYLVG------MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
               Y  ++        ++  +     P D    K  L  +   +E++  SP V  A
Sbjct: 382 PFAAYADFMRANGLTERIARMRQQPGFPTDAGLRKQALSALQAEIEQWPVSPAVADA 438


>gi|42522989|ref|NP_968369.1| adventurous gliding motility protein U [Bdellovibrio bacteriovorus
           HD100]
 gi|39575194|emb|CAE79362.1| adventurous gliding motility protein U [Bdellovibrio bacteriovorus
           HD100]
          Length = 1237

 Score = 35.9 bits (82), Expect = 5.5,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 32/90 (35%), Gaps = 5/90 (5%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            +  A    +   +  +   +N+    FP + +     L    + Y  GK+ QA    E 
Sbjct: 147 YFNNAFANQQIAQYKVSEILYNKLLTQFPKSPLIADGTLAIGELLYDQGKFAQAL---EH 203

Query: 120 YITQ--YPESKNVDYVYYLVGMSYAQMIRD 147
           ++    +P S+   Y  Y    +Y  M   
Sbjct: 204 FLRVEKFPNSRVYSYGMYKAAWAYYNMRDS 233


>gi|33862569|ref|NP_894129.1| TPR repeat-containing protein [Prochlorococcus marinus str. MIT 9313]
 gi|33640682|emb|CAE20471.1| TPR repeat [Prochlorococcus marinus str. MIT 9313]
          Length = 1057

 Score = 35.9 bits (82), Expect = 5.5,   Method: Composition-based stats.
 Identities = 20/151 (13%), Positives = 47/151 (31%), Gaps = 36/151 (23%)

Query: 53   DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG---- 108
            + +Y    Y +     + +++ +A   + +     P            A   Y+ G    
Sbjct: 908  NPQYSNAYYNRGNAKSELKDYQEAIADYTKAIEIDP----------KDAPAYYNRGNAKS 957

Query: 109  ---KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
                YQ+A +   + I   P+   +   Y   G++          D +  +  +   ++ 
Sbjct: 958  ELKDYQEAIADYSKAIEINPQ---LALAYNNRGLAKY--------DSKDYQGTIADYNKA 1006

Query: 166  VERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
            +E      Y    +          A KE+ +
Sbjct: 1007 IEIDP--QYANAYKNRGN------AKKELGV 1029



 Score = 35.1 bits (80), Expect = 9.9,   Method: Composition-based stats.
 Identities = 31/233 (13%), Positives = 68/233 (29%), Gaps = 44/233 (18%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
           +G    +  D       D +       + +     +++  A   +N+     P       
Sbjct: 516 IGDTEGAISDYSKAIEIDPKDADAFTNRGLAKYDSKDYQGAIADYNKAIEIDP------- 568

Query: 96  SLLMSAFVQY-----SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
             L  A+          G +Q A +   + +   P+   +   Y   G++          
Sbjct: 569 -QLADAYNNRGLVKDELGDHQGAIADYNKSLDINPQ---LADAYNNRGLAKY-------- 616

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY----------- 199
           D +  +  +   ++ ++    +P+   A     + +++L   +  I  Y           
Sbjct: 617 DSKDYQGAIADYNKSLDI---NPHFALAYNNRGLAKDELGNHQGAIADYNKAIEIKPQYA 673

Query: 200 --YLKRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEA 246
             Y  RG   + +   Q  +A YS +         A      A   L     A
Sbjct: 674 NAYFNRGNAKSDLGDTQGAIAVYSKSIEINPQYAAAYYNRGNAKRKLGDNQGA 726


>gi|326912086|ref|XP_003202385.1| PREDICTED: tetratricopeptide repeat protein 26-like, partial
           [Meleagris gallopavo]
          Length = 541

 Score = 35.9 bits (82), Expect = 5.6,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 69/204 (33%), Gaps = 24/204 (11%)

Query: 65  VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
              L  ++F+ A        +          + L   +  +  G Y++A    E    Q 
Sbjct: 18  EELLAGRDFTGAIALLE--FQRHA-GEQQEDADLWIGYSAFHLGDYKRALEEYEALTKQP 74

Query: 125 PESKNVDYV-----YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
             S +V +V     Y+ +GM               ++L  + +  +  ++ +   +  + 
Sbjct: 75  SCSPDV-WVNLACTYFFLGM--YTQAEQAALKAPKSRLQNRLLFHLAHKFNDEKKLMSSH 131

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA---RLVEA 236
             +          ++ +   +  R  Y  AI  ++ +L          E +A    +   
Sbjct: 132 QNLQDIT----EDQLSLASIHYMRSHYQEAIDIYKCILLE------NREYLALNVYVALC 181

Query: 237 YVALALMDEAREVVSLIQERYPQG 260
           Y  L   D ++EV+++  ++ P  
Sbjct: 182 YYKLDYYDVSQEVLAVYLQQVPDS 205


>gi|322711339|gb|EFZ02913.1| NADPH oxidase regulator NoxR [Metarhizium anisopliae ARSEF 23]
          Length = 515

 Score = 35.9 bits (82), Expect = 5.6,   Method: Composition-based stats.
 Identities = 13/102 (12%), Positives = 31/102 (30%), Gaps = 18/102 (17%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
            A+       F  A   F++ +          K L     +  + G++++A    +  I 
Sbjct: 12  AALARYDNNEFDDALGEFDRIAD-------TSKILFNMGVIHATLGEHEKAVECYQRAIR 64

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
                + +   Y+  G+S   +           +  L   + 
Sbjct: 65  L---DQYLAVAYFQQGVSNFLL--------GDFEEALANFND 95


>gi|307106595|gb|EFN54840.1| hypothetical protein CHLNCDRAFT_134871 [Chlorella variabilis]
          Length = 802

 Score = 35.9 bits (82), Expect = 5.6,   Method: Composition-based stats.
 Identities = 14/142 (9%), Positives = 31/142 (21%), Gaps = 42/142 (29%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA---------RKSLL------------ 98
           ++ +A    K   +  A   +       P +  A         R                
Sbjct: 434 LFNRAFSLDKLGRYDAALRDYEAALGLEPGSSYAHYNAGIVRDRLGQYAAAVAAFSAAIA 493

Query: 99  ----------MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
                        F      +Y+ A +     +   P        YY   ++  ++    
Sbjct: 494 LEPRNADFYHNRGFSYRKMERYEDAVADYTRAVQFNPAHTK---AYYNRAVALERL---- 546

Query: 149 PYDQRATKLMLQYMSRIVERYT 170
               R  +      S ++    
Sbjct: 547 ----RRYQDAAADYSLVLRLDP 564



 Score = 35.9 bits (82), Expect = 6.1,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 44/131 (33%), Gaps = 17/131 (12%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           K  +F+ A E + +            ++    A+   S G Y QA +   E I   PE+ 
Sbjct: 681 KAGSFAAAAEDYGRLIAL---GHATVRNFNSRAYCHASLGNYAQAVADYSEAIQLDPENV 737

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +    ++  G+S+ +          +    +   +  +     +     A +      + 
Sbjct: 738 H---AFFNRGISHEKR--------GSHAAAVDDFTACIRLDPTN---AVAFYNRASCFDA 783

Query: 189 LAAKEVEIGRY 199
           L   E  +G Y
Sbjct: 784 LGQYERAVGDY 794


>gi|301611744|ref|XP_002935393.1| PREDICTED: hypothetical protein LOC100485775 [Xenopus (Silurana)
            tropicalis]
          Length = 1702

 Score = 35.9 bits (82), Expect = 5.6,   Method: Composition-based stats.
 Identities = 11/69 (15%), Positives = 21/69 (30%), Gaps = 10/69 (14%)

Query: 67   FLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
             L  +++++A  +F         +       K+ L  A           A       I  
Sbjct: 1058 LLNRKDYAQAIRHFTAALNVDPVY------IKAYLCRAQAFQQINDLNNAMKDITRAIHL 1111

Query: 124  YPESKNVDY 132
            +P+S    Y
Sbjct: 1112 HPDSPQ-PY 1119


>gi|296133597|ref|YP_003640844.1| Tetratricopeptide TPR_2 repeat protein [Thermincola sp. JR]
 gi|296032175|gb|ADG82943.1| Tetratricopeptide TPR_2 repeat protein [Thermincola potens JR]
          Length = 215

 Score = 35.9 bits (82), Expect = 5.6,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 41/122 (33%), Gaps = 14/122 (11%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A+L ++     +A +   Q  R  P      K+     +V    G Y++A +     
Sbjct: 108 YNLALLKIQVGKIDEAKKILEQIKRKRP---EDLKARATLGYVYAEKGLYEKALAEFRLV 164

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
              YP + ++    +  G  Y +   D            +Y  R ++   +    K A  
Sbjct: 165 EKYYPTNADL---MFQFGRVYEKQGDDA--------QAREYYYRALKFDPHMDKAKEALK 213

Query: 181 YV 182
            +
Sbjct: 214 KL 215


>gi|229133038|ref|ZP_04261879.1| TPR repeat-containing protein [Bacillus cereus BDRD-ST196]
 gi|228650456|gb|EEL06450.1| TPR repeat-containing protein [Bacillus cereus BDRD-ST196]
          Length = 891

 Score = 35.9 bits (82), Expect = 5.6,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 44/134 (32%), Gaps = 16/134 (11%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAF 102
            +  D   D       Y  A    +   + +A + F Q   +         + ++   A 
Sbjct: 591 KLIKDREIDKENNEAAYLLASANFRIGKYQEAVQNFEQALANNAKGIEPYKKDAMRDLAV 650

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG-MSYAQMIRDVPYDQRATKLMLQY 161
                 ++++A  +  +  T+   +++   V YL G +S A     V  D         +
Sbjct: 651 SHMKMKEFEKAEDVIVKMSTK--TNEDKAIVSYLKGQLSTA----TVQLD-----KAESF 699

Query: 162 MSRIVERYTNSPYV 175
               +++  +S   
Sbjct: 700 FKEAIKQ--DSKNA 711


>gi|17227857|ref|NP_484405.1| hypothetical protein all0361 [Nostoc sp. PCC 7120]
 gi|17129706|dbj|BAB72319.1| all0361 [Nostoc sp. PCC 7120]
          Length = 169

 Score = 35.9 bits (82), Expect = 5.6,   Method: Composition-based stats.
 Identities = 19/168 (11%), Positives = 56/168 (33%), Gaps = 35/168 (20%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           L   FS ++   + +       +      D     ++  + +   K+ +F  A + +   
Sbjct: 14  LATLFSTSLILCICFGNSHPVAIVNAQTPD---AYKLVNQGIESYKKGDFHAAIKPWEA- 69

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG----- 138
                           +         ++   ++          ++N+   Y  +G     
Sbjct: 70  ----------------ALDSYQKNNDFRN-IAII---------NENLARTYQQLGNKSLT 103

Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
           +SY + ++D  + Q+  + + + ++ I + Y+NS   K +       +
Sbjct: 104 LSYWEKVKDYYHSQKNLQKVGRILTEIAQIYSNSGQTKKSYQSFMWCK 151


>gi|228915968|ref|ZP_04079543.1| TPR domain protein [Bacillus thuringiensis serovar pulsiensis BGSC
           4CC1]
 gi|228928414|ref|ZP_04091455.1| TPR domain protein [Bacillus thuringiensis serovar pondicheriensis
           BGSC 4BA1]
 gi|228831461|gb|EEM77057.1| TPR domain protein [Bacillus thuringiensis serovar pondicheriensis
           BGSC 4BA1]
 gi|228843786|gb|EEM88860.1| TPR domain protein [Bacillus thuringiensis serovar pulsiensis BGSC
           4CC1]
          Length = 304

 Score = 35.9 bits (82), Expect = 5.6,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 57/151 (37%), Gaps = 36/151 (23%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
             +++K++ + +A E F +     P    + ++    A   Y+ G+ ++A    E ++  
Sbjct: 75  GDIYMKQKKWEEAKEAFQKSISIQP----SDEAYHNVAVAHYNLGELEEA---SEFFLR- 126

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
              + + DY+ Y    SY + + D+    +  K  L   +R                   
Sbjct: 127 --AAGDSDYIMY----SYVKCLIDLGR-TKEAKEKLDAFNR------------------- 160

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
              N L   E+ +   Y++   Y  AI  F+
Sbjct: 161 ESDNFLG--EMMVADLYVELNCYKKAIEWFE 189


>gi|229094089|ref|ZP_04225173.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
          cereus Rock3-42]
 gi|229187222|ref|ZP_04314367.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
          cereus BGSC 6E1]
 gi|228596232|gb|EEK53907.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
          cereus BGSC 6E1]
 gi|228689301|gb|EEL43120.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
          cereus Rock3-42]
          Length = 273

 Score = 35.9 bits (82), Expect = 5.6,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 25/66 (37%)

Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
           +Q+ K  LT   S ++  L     + + +  L          E+ EKA   L+++    
Sbjct: 1  MFQMKKLLLTALISTSIFGLAACGGKDNDEKKLVVGASNVPHAEILEKAKPLLEKKGIEL 60

Query: 76 AYEYFN 81
            E F 
Sbjct: 61 KVEKFQ 66


>gi|262196419|ref|YP_003267628.1| serine/threonine protein kinase [Haliangium ochraceum DSM 14365]
 gi|262079766|gb|ACY15735.1| serine/threonine protein kinase [Haliangium ochraceum DSM 14365]
          Length = 1290

 Score = 35.9 bits (82), Expect = 5.6,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 45/121 (37%), Gaps = 13/121 (10%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC-----SRDFPFAGVARKSLLMSAFVQY 105
            T       ++    +  +  ++ +A++YF Q          P    + + L   A +  
Sbjct: 798 PTHPDTADSLHSLGNVSTQRGDYDEAWDYFEQALAVVSDALGPDHVDSMRPLTNMANLLQ 857

Query: 106 SAGKYQQAASLGEEYI-----TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA-TKLML 159
             G+Y +A    E  +     +  P+  +V  V  L  M+YA+MI     D  A  +  L
Sbjct: 858 RRGRYDEARVYYERAMHAVERSLGPKHPDVAAV--LGNMAYAEMIAGQLDDAEAHYRRAL 915

Query: 160 Q 160
            
Sbjct: 916 D 916


>gi|218439610|ref|YP_002377939.1| hypothetical protein PCC7424_2659 [Cyanothece sp. PCC 7424]
 gi|218172338|gb|ACK71071.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7424]
          Length = 565

 Score = 35.9 bits (82), Expect = 5.6,   Method: Composition-based stats.
 Identities = 18/135 (13%), Positives = 42/135 (31%), Gaps = 26/135 (19%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
                  ++Q + +A + FNQ      F     ++        +   K+ +A  + E+ +
Sbjct: 151 NLGKALAQQQRWQEAGQAFNQVIL---FDPDNAQAYTNLGNALFKQEKWHEAKKIYEKAL 207

Query: 122 TQYPESK----------------NVDYVYYLVGMS-------YAQMIRDVPYDQRATKLM 158
              P+                  N     YL  ++           +  V Y+Q+     
Sbjct: 208 ELTPKDALIHQRLAEILVEIGEFNSAETLYLKALALAPNQGDLYNGLGQVLYEQKKVDEA 267

Query: 159 LQYMSRIVERYTNSP 173
           +    + ++   N+P
Sbjct: 268 INAYQKAIKLSPNNP 282


>gi|172038545|ref|YP_001805046.1| putative prenyltransferase [Cyanothece sp. ATCC 51142]
 gi|171699999|gb|ACB52980.1| putative prenyltransferase [Cyanothece sp. ATCC 51142]
          Length = 383

 Score = 35.9 bits (82), Expect = 5.6,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 78/242 (32%), Gaps = 53/242 (21%)

Query: 19  LYKFALTIFFS-IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
           + K  L++  + I    +          + +          E+  +   ++ + ++ +A 
Sbjct: 23  ISKLTLSLLTTFILGSSITPVIASPDTSILVSQNYSKEQLDELLRRGRDYVDKGDYQRAI 82

Query: 78  EYFNQCSRDFPFAGVARKSLLM---------SAFVQYSAGKYQQAASLGEEYITQYPESK 128
             +             + + L           A++    G YQ A    ++ ++    + 
Sbjct: 83  ATYE------------QAASLDKDNARIFSGIAYLHSQQGNYQAAVKYYQQALSLDSSNA 130

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           N    YY +G S A  I D      A    +Q   + V+ Y                   
Sbjct: 131 NF---YYALGDSLAN-IGDNNNAASAYYYAIQLNPQFVKSY------------------- 167

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
                + +G   L++  Y  A   ++ V+A   +     EA A +  + +    +D+A +
Sbjct: 168 -----IGLGVVLLRQENYEGAAEAYKRVIALDPN---NPEAFAIMGSSLLQQKQLDQALQ 219

Query: 249 VV 250
            +
Sbjct: 220 YL 221



 Score = 35.5 bits (81), Expect = 8.6,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 76/228 (33%), Gaps = 37/228 (16%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVA---------RKSLLMSAFVQYSAGKYQQAA 114
            V+ L+++N+  A E + +     P    A         ++  L  A +QY         
Sbjct: 171 GVVLLRQENYEGAAEAYKRVIALDPNNPEAFAIMGSSLLQQKQLDQA-LQYLGN------ 223

Query: 115 SLGEEY-----ITQYPESKNVDYVYYLVG---MSYAQMIRDVPYDQRATKLMLQYMSRIV 166
              E +     +        +   Y   G   +   Q+ R    D   TK+ L+  +RI 
Sbjct: 224 -AVERFSGDVDLRL-----LLATAYLQQGQLELGKEQLQRAERIDPSNTKIQLKI-ARIY 276

Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
           E   N          ++    +       +GR  L + +Y+ AI  ++ ++         
Sbjct: 277 EVQENLDEALKIYRRISYLNRKSPEAYAGVGRIQLAQKDYLGAIITYKDLIEIIPQ---N 333

Query: 227 EEAMARLVEAYVALALMDEARE---VVSLIQERYPQGYWARYVETLVK 271
            E    L  A+       EA++       + + Y      + V+ L+K
Sbjct: 334 PEPYYYLGVAFKERQRNSEAKKALQYAKKLYQEYDNTEGIKKVDELLK 381


>gi|159028862|emb|CAO90667.1| mom72 [Microcystis aeruginosa PCC 7806]
          Length = 268

 Score = 35.9 bits (82), Expect = 5.6,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 33/89 (37%), Gaps = 21/89 (23%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS-------AGKYQ 111
           E Y + V  L   ++S A   F Q          A +     A   Y+        G+Y+
Sbjct: 44  EFYNRGVDRLTAGDYSGAIADFTQ----------ALQLEPKDADAYYNRGYAELVLGQYE 93

Query: 112 QAASLGEEYITQYPESKNV----DYVYYL 136
           +A +   + +T  P   N      YV+YL
Sbjct: 94  RAIADYTQALTINPNYVNALGNRCYVHYL 122


>gi|156352485|ref|XP_001622781.1| predicted protein [Nematostella vectensis]
 gi|156209395|gb|EDO30681.1| predicted protein [Nematostella vectensis]
          Length = 1641

 Score = 35.9 bits (82), Expect = 5.6,   Method: Composition-based stats.
 Identities = 25/195 (12%), Positives = 63/195 (32%), Gaps = 42/195 (21%)

Query: 62   EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF-----VQYSAGKYQQAASL 116
             +        N+ +A   F +            +   M A+     V  S  KY+ A + 
Sbjct: 999  SQGKYKDALNNYQRALSLFQKTGD--------ERGQAM-AYHGMGNVHMSQAKYEDALNN 1049

Query: 117  GEEYITQYPESKN---VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS- 172
             +  ++ + ++ +     Y Y  +G  +          Q   +  +      +  +  + 
Sbjct: 1050 YQHALSLFQKTGDESGQAYAYLGMGNVHFN--------QGKYEDAMNNYQHALRLFQKTG 1101

Query: 173  PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
                 A+ Y+ +            G  +  +G+Y  A+  +Q  L+ +      +E+   
Sbjct: 1102 DESGQAKAYLGM------------GDVHFNQGKYEDAMNNYQHALSLFQKTG--DES--G 1145

Query: 233  LVEAYVALALMDEAR 247
               AY+ +     ++
Sbjct: 1146 QASAYLGMGDAHWSQ 1160


>gi|85000805|ref|XP_955121.1| hypothetical protein [Theileria annulata strain Ankara]
 gi|65303267|emb|CAI75645.1| hypothetical protein, conserved [Theileria annulata]
          Length = 272

 Score = 35.9 bits (82), Expect = 5.6,   Method: Composition-based stats.
 Identities = 23/146 (15%), Positives = 54/146 (36%), Gaps = 14/146 (9%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
           A    V    +++ D  +D+          Y E+     K+ N+++A +++ +      F
Sbjct: 73  ASNTTVNNPSENTFDTDVDNNLFGLPSPVYYKERGNECFKDNNYTEAIDWYTKALERLEF 132

Query: 90  AGVAR-KSLL--MSAFVQYSAGKYQQAASLGEE---YITQYPESKNVDYVYYLVGMSYAQ 143
           +     K+ +    A    + G+++ + S   +   +   YP+       Y    M+  +
Sbjct: 133 SEDDILKAQIFCNRAACHQALGEWENSISDCNDALTFNDSYPK------AYLRRSMA-FE 185

Query: 144 MIRDVPYDQRATKLMLQYMSRIVERY 169
             +         +  LQ  S + E+Y
Sbjct: 186 KTKFYQKSHSDLEKALQLDSSLEEKY 211


>gi|157825439|ref|YP_001493159.1| hypothetical protein A1C_01700 [Rickettsia akari str. Hartford]
 gi|157799397|gb|ABV74651.1| hypothetical protein A1C_01700 [Rickettsia akari str. Hartford]
          Length = 245

 Score = 35.9 bits (82), Expect = 5.6,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 18/45 (40%)

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
             A   Y   K  +A    + +I +YP S  +   Y+  G  + +
Sbjct: 122 DLALAAYKDNKLTEAKDKFKNFIQKYPNSLLISNAYFWYGECFFK 166



 Score = 35.9 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 35/108 (32%), Gaps = 20/108 (18%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                    +++Y NS  +  A F+                  + K  +Y  A   +   
Sbjct: 135 EAKDKFKNFIQKYPNSLLISNAYFWYGEC--------------FFKHKDYNGAAVNY--- 177

Query: 217 LANYSDAE---HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           L  Y ++     + + + +L  A   L    EA  ++  + + +P   
Sbjct: 178 LKGYKESPKGAKSSDGLLKLAIALGELKKTQEACNILDKLDKDFPTNR 225


>gi|328875140|gb|EGG23505.1| hypothetical protein DFA_05638 [Dictyostelium fasciculatum]
          Length = 464

 Score = 35.9 bits (82), Expect = 5.7,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 54/171 (31%), Gaps = 24/171 (14%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQC----SRDFPFAGVARKSLL 98
            D ++  + +       + + + +L EQ   KA   F          + P          
Sbjct: 299 EDSFIYKIDNSTIGDNYFRRGLCYLHEQQPDKAVLDFTEALNYLQEEEHP------SVKF 352

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQR 153
                 Y+  KY+ A      +I   P+     Y     VY ++GM +    +D    Q+
Sbjct: 353 FRGRCYYAIQKYRAALEDFNTFIKYNPKHI-AAYEERRDVYSMLGM-HEHAEKDQKIVQK 410

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN-----QLAAKEVEIGRY 199
             +         ++ Y N   ++  +             ++   E+E+  Y
Sbjct: 411 DREKKHDQRLESIQMY-NEERLERIKRRNEDIAEKKRIIRMKQNEIEVADY 460


>gi|300870217|ref|YP_003785088.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000]
 gi|300687916|gb|ADK30587.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000]
          Length = 231

 Score = 35.9 bits (82), Expect = 5.7,   Method: Composition-based stats.
 Identities = 8/54 (14%), Positives = 23/54 (42%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           Y  A + +++ N+++A       ++ +P   +  ++ L  + V        +A 
Sbjct: 146 YNLANVLIEQTNYTEAATVLENFTKAYPKNYLTPQATLTLSDVYRKQNDKTKAI 199


>gi|197117647|ref|YP_002138074.1| TPR domain-containing protein [Geobacter bemidjiensis Bem]
 gi|197087007|gb|ACH38278.1| TPR domain protein [Geobacter bemidjiensis Bem]
          Length = 412

 Score = 35.9 bits (82), Expect = 5.7,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 43/135 (31%), Gaps = 26/135 (19%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           E A   +    ++KA    ++     P     R+  LM     Y    Y  AAS  +E  
Sbjct: 70  EIAKRDMNAGRYAKAARSLSEARELLPGN---RELTLMRGVALYLDKDYLTAASEFKE-- 124

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                 + VD + YL           + YD    +  L Y  R  E   ++  +      
Sbjct: 125 ----AGEGVDPLIYL---------GKIGYDTGDLQGALSYWRRAREMEPDNKMLATLIAK 171

Query: 182 VTVGRNQLAAKEVEI 196
                   A +E+ +
Sbjct: 172 --------AERELPV 178


>gi|170726232|ref|YP_001760258.1| TPR repeat-containing protein [Shewanella woodyi ATCC 51908]
 gi|169811579|gb|ACA86163.1| Tetratricopeptide TPR_2 repeat protein [Shewanella woodyi ATCC
           51908]
          Length = 388

 Score = 35.9 bits (82), Expect = 5.7,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 22/67 (32%), Gaps = 5/67 (7%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           D       Y      LKE ++  A  Y  +        +    ++ +  A  Q++ GK  
Sbjct: 300 DDPTPYNWYLLGRSSLKEGDYFSAIIYLEKFLEN----SPYYHQAYIELASAQHALGKTY 355

Query: 112 QAASLGE 118
            A    +
Sbjct: 356 AAEKSLK 362


>gi|89271328|emb|CAJ82984.1| DnaJ (Hsp40) homolog, subfamily C, member 3 [Xenopus (Silurana)
           tropicalis]
          Length = 504

 Score = 35.9 bits (82), Expect = 5.7,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 37/108 (34%), Gaps = 4/108 (3%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV-ARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           + A   + E  +  A   +    +  P     +      S      + +  +A  +  E+
Sbjct: 273 QAAEELIHEGRYEDALPKYEGILKTEPNVPYYSALVQERSCHCYSKSQQSTEAIRVCTEF 332

Query: 121 ITQYPESKNV--DYVY-YLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
           + Q P + N   D    Y++   Y + IRD    Q+  +   Q    +
Sbjct: 333 LQQEPNNVNALKDRAEAYILEEMYEEAIRDYETAQQNNENDKQIREGL 380


>gi|193062647|ref|ZP_03043741.1| tetratricopeptide repeat protein [Escherichia coli E22]
 gi|193069957|ref|ZP_03050905.1| tetratricopeptide repeat protein [Escherichia coli E110019]
 gi|194425776|ref|ZP_03058332.1| tetratricopeptide repeat protein [Escherichia coli B171]
 gi|260843628|ref|YP_003221406.1| hypothetical protein ECO103_1443 [Escherichia coli O103:H2 str.
           12009]
 gi|192931769|gb|EDV84369.1| tetratricopeptide repeat protein [Escherichia coli E22]
 gi|192956710|gb|EDV87165.1| tetratricopeptide repeat protein [Escherichia coli E110019]
 gi|194415831|gb|EDX32097.1| tetratricopeptide repeat protein [Escherichia coli B171]
 gi|257758775|dbj|BAI30272.1| conserved predicted protein [Escherichia coli O103:H2 str. 12009]
 gi|323162357|gb|EFZ48212.1| tetratricopeptide repeat family protein [Escherichia coli E128010]
          Length = 389

 Score = 35.9 bits (82), Expect = 5.7,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 62/186 (33%), Gaps = 36/186 (19%)

Query: 64  AVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
              ++    + +A + FNQ     DF    + +   +  A       ++Q+A  + E  +
Sbjct: 114 GRDYMAAGLYDRAEDMFNQLTDETDFRIGALQQLLQIYQA-----TSEWQKAIDVAERLV 168

Query: 122 TQYPESKNVDYVYYL--VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
               + + V+  ++   + + +     D+       K              NS       
Sbjct: 169 KLGKDKQRVEIAHFYCELALQHM-ASDDLDRAMTLLKKGAAADK-------NS------- 213

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                     A   + +GR ++ +GEY  A+   Q V++   D E   E +  L   Y  
Sbjct: 214 ----------ARVSIMMGRVFMAKGEYAKAVESLQRVIS--QDRELVSETLEMLQTCYQQ 261

Query: 240 LALMDE 245
           L    E
Sbjct: 262 LGKTAE 267


>gi|317503869|ref|ZP_07961878.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
 gi|315665025|gb|EFV04683.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
          Length = 960

 Score = 35.9 bits (82), Expect = 5.7,   Method: Composition-based stats.
 Identities = 22/149 (14%), Positives = 51/149 (34%), Gaps = 29/149 (19%)

Query: 69  KEQNFSKAYEYFNQCSRDFP------------------FAGVARKSLLMSAFVQYSAGKY 110
           +  +F+ A EY  +  R+ P                  F      SL   ++  ++  +Y
Sbjct: 577 RRNDFTHAEEYLTRLRRECPKSQWTALLNDPYYQENARFGKHIEDSLYAVSYTAFNESRY 636

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
            +  +  +    ++P+  N D   +L  +S               K  LQ ++ ++  + 
Sbjct: 637 HEVLANAQLSAKRFPKGANRDKFLFLSALSKLND--------GDAKGCLQDLNTLLSTHP 688

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
            S   + A   +   +   A K +   ++
Sbjct: 689 ESRLGEMAGMIINGVK---AGKTLHGAKF 714



 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 20/47 (42%)

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           ++ +Y +  H +EA   L   Y        A E ++ ++   P+  W
Sbjct: 554 LIQHYPNFAHIDEAFYHLYLLYARRNDFTHAEEYLTRLRRECPKSQW 600


>gi|297622676|ref|YP_003704110.1| TIGR02710 family CRISPR-associated protein [Truepera radiovictrix
           DSM 17093]
 gi|297163856|gb|ADI13567.1| CRISPR-associated protein, TIGR02710 family [Truepera radiovictrix
           DSM 17093]
          Length = 487

 Score = 35.9 bits (82), Expect = 5.7,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 25/62 (40%), Gaps = 7/62 (11%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRD----FPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           Y+ A      Q ++ A   F + +        F+  A+ S    A+  + + +++ AA  
Sbjct: 199 YQTAKALYNAQEYTLAAREFIRIADRTGDVRRFSPYAKLSE---AYAAWLSNRFESAAHA 255

Query: 117 GE 118
            E
Sbjct: 256 FE 257


>gi|291288727|ref|YP_003505543.1| N-acetylmuramoyl-L-alanine amidase [Denitrovibrio acetiphilus DSM
           12809]
 gi|290885887|gb|ADD69587.1| N-acetylmuramoyl-L-alanine amidase [Denitrovibrio acetiphilus DSM
           12809]
          Length = 605

 Score = 35.9 bits (82), Expect = 5.7,   Method: Composition-based stats.
 Identities = 12/92 (13%), Positives = 35/92 (38%), Gaps = 8/92 (8%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFL-------KEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
           +Y    +       +Y  A  +        +  +   A + F   + ++    +A  + +
Sbjct: 55  IYAKDPSGKLADDSLYYTARTYHRSYVRYKQRADLLNALKNFKLLASNY-QTRLASLAYI 113

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
            SA +      Y  A  + ++ I+++P +++ 
Sbjct: 114 ESANLYEEQKDYPSARYMLKKLISRFPNTEDA 145


>gi|307152343|ref|YP_003887727.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822]
 gi|306982571|gb|ADN14452.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822]
          Length = 235

 Score = 35.9 bits (82), Expect = 5.7,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 35/119 (29%), Gaps = 18/119 (15%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAFVQYSAGKYQ 111
           V  + ++        +E ++S A    +Q     P +      + L+      +  G++ 
Sbjct: 38  VESEEKLRISVKQKAQEGDYSGAIALLDQLIESHPESAIDYNNRGLM-----YFWQGQFF 92

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           QA     + I     +K +D  Y      Y          Q      L      ++   
Sbjct: 93  QAIKDYNQAIEL---NKKLDQAYNNRANCYMA--------QGNWAEALTDYETAIDLNP 140


>gi|194334675|ref|YP_002016535.1| TPR repeat-containing protein [Prosthecochloris aestuarii DSM 271]
 gi|194312493|gb|ACF46888.1| Tetratricopeptide TPR_2 repeat protein [Prosthecochloris aestuarii
           DSM 271]
          Length = 201

 Score = 35.9 bits (82), Expect = 5.7,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 57/166 (34%), Gaps = 30/166 (18%)

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
             + ++ +          +Y  A    E+ ++  P+S          G     ++  + +
Sbjct: 50  PDSPEAYIKLGTAHARQEQYDAAIDAYEKALSLDPDS----------GERVFPVLGAIAF 99

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
           ++   +  L Y  + +                    + L   ++  G  YLK  +   AI
Sbjct: 100 NREEYEKALDYFHKSLAFSPE---------------DSLRFYDM--GNVYLKLEQNENAI 142

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
             ++  +     +   EEA   L  +Y+      EA ++ S +QER
Sbjct: 143 EAYRKAIEF---SVSFEEAYYNLAISYIRNGQKKEAEKIYSWLQER 185


>gi|167044017|gb|ABZ08703.1| putative TPR domain protein [uncultured marine crenarchaeote
           HF4000_APKG3K8]
          Length = 316

 Score = 35.9 bits (82), Expect = 5.7,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 3/53 (5%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
            +     E+++ A  F+K  NFS A + +++     P      ++LL  A   
Sbjct: 20  ANAESVEELHDVAYQFMKSGNFSDAIDTYSKILEMQPND---EQALLNRAIAY 69


>gi|147676599|ref|YP_001210814.1| hypothetical protein PTH_0264 [Pelotomaculum thermopropionicum SI]
 gi|146272696|dbj|BAF58445.1| hypothetical membrane protein [Pelotomaculum thermopropionicum SI]
          Length = 927

 Score = 35.9 bits (82), Expect = 5.7,   Method: Composition-based stats.
 Identities = 28/240 (11%), Positives = 72/240 (30%), Gaps = 34/240 (14%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY---SAGKYQQAAS 115
           ++ ++A     +   ++  + + +   + P+  + R+    +  V +        ++   
Sbjct: 404 QLLQEAGEKYPQSYLARGIKAYEEVRGE-PYFEMERRKQQGNWDVYFYGDEQYDPEREIP 462

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT-KLMLQYMSRIVERYTNSP- 173
             E+++ ++P     D   Y +   Y   I     D   T +  L      +  +     
Sbjct: 463 GWEKFLAEFPGHPGADDAAYRLARCY--EIEGRWTDALNTLRKALSLPDGDIRYHAAGRL 520

Query: 174 -YVKGARFYVTVGRNQ----------------LAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
            YV   R      +                  L    + +    L+R  Y       +  
Sbjct: 521 VYVLDVRMTYDQLKELSQAREQSKKLDPSLKPLVDYSLAVKE--LRRDNYRQTAGMLEEF 578

Query: 217 LANYSDAEHAEEAMARLVEAYV-------ALALMDEAREVVSLIQERYPQGYWARYVETL 269
           L  Y D    + A+      Y        ++     A E ++ ++ ++ +      +  L
Sbjct: 579 LKQYQDFGENQGALPFNQLNYQLKYDFRSSVKKQQAAVEELAALEVQWKKSGNPADLYRL 638


>gi|311744911|ref|ZP_07718696.1| hypothetical protein ALPR1_00295 [Algoriphagus sp. PR1]
 gi|126577414|gb|EAZ81634.1| hypothetical protein ALPR1_00295 [Algoriphagus sp. PR1]
          Length = 401

 Score = 35.9 bits (82), Expect = 5.7,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 44/122 (36%), Gaps = 17/122 (13%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMS 100
           +D       D       + +  ++ K +N+ +A +  ++        P            
Sbjct: 273 KDFSEAIKLDDMDPETFFYRGKVYGKLKNWKEAEKDLSKAIELDAQNP--------EYYL 324

Query: 101 AFVQ--YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
           A  Q  Y +   Q+A +    +I   PE+ +    YY  G++Y Q ++++    +  K  
Sbjct: 325 ARGQNRYLSKALQEALADFTIFINLDPENPS---AYYHRGITY-QRLKEMDLACQDLKKA 380

Query: 159 LQ 160
             
Sbjct: 381 AD 382


>gi|119485213|ref|ZP_01619598.1| hypothetical protein L8106_07184 [Lyngbya sp. PCC 8106]
 gi|119457441|gb|EAW38566.1| hypothetical protein L8106_07184 [Lyngbya sp. PCC 8106]
          Length = 272

 Score = 35.9 bits (82), Expect = 5.7,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 78/238 (32%), Gaps = 40/238 (16%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
            + FS+ +         ++     +S   V+    +  +A        F++A  Y+ Q  
Sbjct: 10  FLVFSLQILGGYANPAYAASGSLAESTEIVQDVENLLNQAFDASNTGKFAEAETYWTQII 69

Query: 85  RDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL-VGMSY 141
           + +P      + +  +       S  K + A S   + I   P + +     YL  G++Y
Sbjct: 70  KQYPDNAAMWSNRGNVRV-----SQNKIEAALSDYNKAIELAPNAPDP----YLNRGVAY 120

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
            ++ R         +  +   + ++E        + A  Y   G N  A           
Sbjct: 121 ERLER--------WQDAIADYNHVLELS-----GEDAVAYNNRG-NAEAG---------- 156

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
             G++ AAI  ++       +      A A    A       ++A   +  +  +YP 
Sbjct: 157 -LGDWKAAIIDYETAAELDPNYAF---ARANYALALYQDGQTEKAIRTMKNLVRKYPN 210


>gi|157105060|ref|XP_001648699.1| DNA replication licensing factor MCM8 [Aedes aegypti]
 gi|108880194|gb|EAT44419.1| DNA replication licensing factor MCM8 [Aedes aegypti]
          Length = 845

 Score = 35.9 bits (82), Expect = 5.7,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 36/93 (38%), Gaps = 15/93 (16%)

Query: 178 ARFYVTVGRNQLAAKEVEIGRYY----------LKRGEYVAAIPRFQLVLANYSDAEHAE 227
           A   + +   +L  K +   R            L+   + A + R Q  + +        
Sbjct: 663 ANEKMDLLPVELIQKYIAYARKNIHPKLTEAAALEIRNFYAEMRRAQQGMDSIPVTTRQL 722

Query: 228 EAMARLVEAYVALALMDE-----AREVVSLIQE 255
           EA+ RL +A   + L  E     A++V+++++ 
Sbjct: 723 EALVRLTQARARMDLESEATLQHAQDVIAILRY 755


>gi|50285201|ref|XP_445029.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524332|emb|CAG57929.1| unnamed protein product [Candida glabrata]
          Length = 1110

 Score = 35.9 bits (82), Expect = 5.7,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 41/114 (35%), Gaps = 4/114 (3%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           +A L  +++N+  + + F +     P   +     +      +    Y+ A    E  + 
Sbjct: 188 RAKLMYQKKNYVASLKLFQELLVINP--VLKPDPRIGIGMCFWQLKDYKLAIQAWERALQ 245

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
             P +K    +  L+G  +   + +   D+   +     ++ +   YTNS    
Sbjct: 246 LDPNNKQAS-ILVLLGK-FHNSLTEAENDEDFKEKYAAALADLNTVYTNSKESP 297


>gi|116191669|ref|XP_001221647.1| hypothetical protein CHGG_05552 [Chaetomium globosum CBS 148.51]
 gi|88181465|gb|EAQ88933.1| hypothetical protein CHGG_05552 [Chaetomium globosum CBS 148.51]
          Length = 518

 Score = 35.9 bits (82), Expect = 5.7,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 36/102 (35%), Gaps = 18/102 (17%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           +A+ F     F +A   F++ S          K L     +  + G+++QA    +  + 
Sbjct: 12  EALKFYDNNEFDEALASFDKVSD-------TSKILFNMGVINATLGQHEQAVECYQRALK 64

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
                + +   Y+  G+S   +I D        +  L   + 
Sbjct: 65  L---DQYLAVAYFQQGVSNF-LIGDF-------EEALANFND 95


>gi|323143609|ref|ZP_08078286.1| tol-pal system protein YbgF [Succinatimonas hippei YIT 12066]
 gi|322416672|gb|EFY07329.1| tol-pal system protein YbgF [Succinatimonas hippei YIT 12066]
          Length = 251

 Score = 35.9 bits (82), Expect = 5.8,   Method: Composition-based stats.
 Identities = 18/122 (14%), Positives = 40/122 (32%), Gaps = 15/122 (12%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           T     +  Y+ A  F+   N + A + F+   + +P   +   +      VQY   K  
Sbjct: 127 TADAQAKSAYDNAYKFVTANNLAAAEKEFSAYLQSYPDNSLTPNAWYWLGQVQYKQNKLD 186

Query: 112 QAASL---GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +A         +    P+  +     Y +G+        +   +       Q+   ++ +
Sbjct: 187 EARVSFLNVARFTAT-PKRPDS---LYKLGL--------ISKLKGDKDKAKQFFELVINK 234

Query: 169 YT 170
           Y 
Sbjct: 235 YP 236


>gi|257463577|ref|ZP_05627969.1| TPR repeat-containing protein [Fusobacterium sp. D12]
 gi|317061132|ref|ZP_07925617.1| predicted protein [Fusobacterium sp. D12]
 gi|313686808|gb|EFS23643.1| predicted protein [Fusobacterium sp. D12]
          Length = 107

 Score = 35.9 bits (82), Expect = 5.8,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 25/71 (35%), Gaps = 9/71 (12%)

Query: 63  KAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           K +   + + +S A +   +     +D P        L    +     G +++A    E 
Sbjct: 31  KGLNHEERKEWSSAIQELEKSRALQKDNP------LILKELGYCYAKQGDFEKARDCYER 84

Query: 120 YITQYPESKNV 130
            +   PE +N 
Sbjct: 85  VLQLEPEDRNA 95


>gi|255659101|ref|ZP_05404510.1| putative lipoprotein [Mitsuokella multacida DSM 20544]
 gi|260848545|gb|EEX68552.1| putative lipoprotein [Mitsuokella multacida DSM 20544]
          Length = 443

 Score = 35.9 bits (82), Expect = 5.8,   Method: Composition-based stats.
 Identities = 20/154 (12%), Positives = 47/154 (30%), Gaps = 38/154 (24%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           +Y + +++    ++ +A   F Q      D      +  +    A  Q   G+++ A   
Sbjct: 297 LY-RGIVYFNRADYKQAESDFRQAVGLKSD------SMAAHYNLAITQQREGRHKDALKT 349

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            +  +     S      +Y  G+        +  DQ+     L      +     +   K
Sbjct: 350 YDALLKL---SPEFMQAWYNRGL--------IALDQKKESEALADFQEALRLTPQTADAK 398

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
            A+                +   Y+++ +Y  A 
Sbjct: 399 NAQ---------------AVA--YIRQKKYEKAW 415


>gi|114799947|ref|YP_761257.1| TPR domain-containing protein [Hyphomonas neptunium ATCC 15444]
 gi|114740121|gb|ABI78246.1| TPR domain protein [Hyphomonas neptunium ATCC 15444]
          Length = 522

 Score = 35.9 bits (82), Expect = 5.8,   Method: Composition-based stats.
 Identities = 9/67 (13%), Positives = 22/67 (32%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
             + ++     KA  + ++  +  P + +   S    +   +  G  + A +  E  I  
Sbjct: 384 GRVLMRNGEPEKAIFHLSRFEQLSPSSPLRYFSTFQKSVALFMQGDLKGAETALESTIRL 443

Query: 124 YPESKNV 130
            P     
Sbjct: 444 NPSYPFA 450



 Score = 35.9 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 21/151 (13%), Positives = 41/151 (27%), Gaps = 24/151 (15%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
           F +          Q++R++ L           +   A         ++A  Y        
Sbjct: 314 FEVGGGLDQALAEQAAREIDLALTLGRDRPDVLARAATALSMIGRPAEALPYAEDAVAMN 373

Query: 88  PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY--------VYYLVGM 139
           P  G+     L    V    G+ ++A      +    P S  + Y          ++ G 
Sbjct: 374 PGGGIGH---LYLGRVLMRNGEPEKAIFHLSRFEQLSPSSP-LRYFSTFQKSVALFMQG- 428

Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
                      D +  +  L+   R+   Y 
Sbjct: 429 -----------DLKGAETALESTIRLNPSYP 448


>gi|222055719|ref|YP_002538081.1| hypothetical protein [Geobacter sp. FRC-32]
 gi|221565008|gb|ACM20980.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. FRC-32]
          Length = 420

 Score = 35.9 bits (82), Expect = 5.8,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 30/84 (35%), Gaps = 9/84 (10%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY-----SAGKYQQAASLGE 118
           A+  L    + KA E   +    +P+     +  L  A++          +Y +AA   +
Sbjct: 36  ALELLNAGEYEKALEQLQKAFSFYPYDE-TLRKNLAVAYMYMGKKELENNRYLEAAENFD 94

Query: 119 EYITQYPESKNVDYVYYLVGMSYA 142
                 P +    Y   + G+++ 
Sbjct: 95  HARELSPGNST--YGM-MRGIAFY 115


>gi|46095312|gb|AAS80154.1| protein serine/threonine phosphatase [Nicotiana benthamiana]
          Length = 232

 Score = 35.9 bits (82), Expect = 5.8,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 25/87 (28%), Gaps = 14/87 (16%)

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
             AF      +Y  A     + I   P+       YY  G +Y  M           K  
Sbjct: 21  NRAFAHTKLEEYGSAIQDAAKAIETDPKYSKG---YYRRGAAYLAM--------GKFKDA 69

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVG 185
           L+   R+ +   N P    A   +   
Sbjct: 70  LKDFQRVKKLCPNDP---DATKKLKEC 93


>gi|326431070|gb|EGD76640.1| tetratricopeptide protein, variant [Salpingoeca sp. ATCC 50818]
          Length = 753

 Score = 35.9 bits (82), Expect = 5.8,   Method: Composition-based stats.
 Identities = 17/144 (11%), Positives = 44/144 (30%), Gaps = 35/144 (24%)

Query: 64  AVLFLKEQNFSKAYEYFNQ--------CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
            +    + ++ KA  ++ +             P                +S G+Y++A  
Sbjct: 473 GIANYSKGDYDKAIAFYEKALAITVVVLGEKHPSTATTYN---NLGEAYHSKGEYEKAIE 529

Query: 116 LGEEYITQ--------YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           L E+ +          +P++ +               I  +  D+   +    YM + ++
Sbjct: 530 LYEKALAITVETLGVKHPDTADT-----------CNNIGLLHNDRGDKEQACSYMQQALD 578

Query: 168 RY-----TNSPYVKGARFYVTVGR 186
            +      + P  + A   +   R
Sbjct: 579 VFATSLGPDHPNTRKAERNLRRIR 602



 Score = 35.1 bits (80), Expect = 9.8,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 21/68 (30%), Gaps = 12/68 (17%)

Query: 61  YEK-AVLFLKEQNFSKAYEYF--------NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           Y      +  + ++ KA   +            +  P       S L      YS G Y 
Sbjct: 427 YNNLGSAYDDKGDYDKAIALYAKALAIRVETLGQKHPSTA---NSYLGLGIANYSKGDYD 483

Query: 112 QAASLGEE 119
           +A +  E+
Sbjct: 484 KAIAFYEK 491


>gi|324326239|gb|ADY21499.1| TPR domain protein [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 891

 Score = 35.9 bits (82), Expect = 5.8,   Method: Composition-based stats.
 Identities = 36/256 (14%), Positives = 69/256 (26%), Gaps = 74/256 (28%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAF 102
            +  D   D       Y  A    +   + +A + F Q   +         + ++   A 
Sbjct: 591 KLIKDREIDKENNEAAYLLASANFRIGKYQEAVQNFEQALANNAKGIEPYKKDAMRDLAV 650

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG-MSYAQMIRDVPYDQRATKLMLQY 161
                 ++++A  +  +  T+   +++   V YL G +S A     V  D         +
Sbjct: 651 SHMKMKEFEKAEDVIVKMSTK--TNEDKAIVSYLKGQLSTA----TVQLD-----KAESF 699

Query: 162 MSRIVERYTNSPYV-------------------KGARFYVTV------------------ 184
               + +  +S                        A+  +                    
Sbjct: 700 FKEAIMQ--DSKNAIYTIELSNLYVLWNKTNLIDSAKKEMNYQQASHILQVAIQKDMKNI 757

Query: 185 -GRNQLAAKEVEIGRYYLKRG------EYVAAIPRFQLVLAN--------------YSDA 223
              NQL     E G++Y  R        Y  A+  +  V+++              Y   
Sbjct: 758 ELLNQLGIVYYEAGQFYETRDGAKSTAAYQQALEAYNRVVSSGTRDINTLVNIGILYDKV 817

Query: 224 EHAEEAMARLVEAYVA 239
               EA     EAY  
Sbjct: 818 GQVNEAEKLFTEAYAQ 833


>gi|261403846|ref|YP_003248070.1| Tetratricopeptide TPR_2 repeat protein [Methanocaldococcus
           vulcanius M7]
 gi|261370839|gb|ACX73588.1| Tetratricopeptide TPR_2 repeat protein [Methanocaldococcus
           vulcanius M7]
          Length = 323

 Score = 35.9 bits (82), Expect = 5.8,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 72/206 (34%), Gaps = 39/206 (18%)

Query: 71  QNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
             + +  + +++     P F     +K+ ++        GKY++A       +   P+ K
Sbjct: 130 GEYDELLKTYDEILAYTPNFVPMWVKKAEILR-----KLGKYEEALLCLNRALELKPKDK 184

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE----RYTNS-PYVKGARFYVT 183
           N     YL G+   +M R         K  ++   ++++    R+ ++  +       + 
Sbjct: 185 N---ALYLKGVLLKRMGR--------FKEAIECFKKLIDELNVRWIDAIRHAVSLLLLIG 233

Query: 184 VGRNQ-------LAAKEVEIGRYYLKRGEYV------AAIPRFQLVLANYSDAEHAEEAM 230
             ++        L  +E ++  +Y K   Y        A+  +  V+       H   A+
Sbjct: 234 DLKDVERYINMGLKIREDDVALWYYKGELYQKLGKLGEALKCYDRVIELQP---HYIRAL 290

Query: 231 ARLVEAYVALALMDEAREVVSLIQER 256
               + Y     +++A E  +   E 
Sbjct: 291 LSKAKIYERQGDLEKAVEYYNKAVEN 316


>gi|251772295|gb|EES52865.1| Tetratricopeptide TPR_2 repeat protein [Leptospirillum
           ferrodiazotrophum]
          Length = 230

 Score = 35.9 bits (82), Expect = 5.8,   Method: Composition-based stats.
 Identities = 10/71 (14%), Positives = 25/71 (35%), Gaps = 10/71 (14%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF---VQYSAGKYQQAASLGEEY 120
             L +   ++ +A+ Y ++     P         L+  +   V Y  G+   +    +  
Sbjct: 141 GKLDIDRGDYQEAHIYLHEAQERHPENP------LILTYLGIVHYRIGELADSRKNFQSA 194

Query: 121 ITQYPESKNVD 131
           +  +P S  + 
Sbjct: 195 LALHP-SPALA 204


>gi|228923717|ref|ZP_04086995.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
          thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228835846|gb|EEM81209.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
          thuringiensis serovar huazhongensis BGSC 4BD1]
          Length = 273

 Score = 35.9 bits (82), Expect = 5.8,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 24/66 (36%)

Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
           +Q+ K  LT   S ++  L     +   +  L          E+ EKA   L+++    
Sbjct: 1  MFQMKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAEILEKAKPLLEKKGIEL 60

Query: 76 AYEYFN 81
            + F 
Sbjct: 61 EVKKFQ 66


>gi|229175682|ref|ZP_04303190.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
          cereus MM3]
 gi|228607823|gb|EEK65137.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
          cereus MM3]
          Length = 273

 Score = 35.9 bits (82), Expect = 5.8,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 24/66 (36%)

Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
           +Q+ K  LT   S ++  L     +   +  L          E+ EKA   L+++    
Sbjct: 1  MFQMKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAEILEKAKPLLEKKGIEL 60

Query: 76 AYEYFN 81
            + F 
Sbjct: 61 EVKKFQ 66


>gi|308198147|ref|XP_001386876.2| glucose repression mediator protein [Scheffersomyces stipitis CBS
           6054]
 gi|149388888|gb|EAZ62853.2| glucose repression mediator protein [Pichia stipitis CBS 6054]
          Length = 815

 Score = 35.9 bits (82), Expect = 5.8,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 38/141 (26%), Gaps = 28/141 (19%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGK 109
           D       Y    + +   +F+ AYE F Q        P              + Y   +
Sbjct: 335 DNSDAHSWYYLGRVHMIRGDFNAAYEAFQQAVNRDSRNP-TFWC-----SIGVLYYQISQ 388

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSY---AQMIRDVPYDQRATKLMLQYMSRIV 166
           Y+ A       I   P    +  V+Y +G  Y      I D           L    +  
Sbjct: 389 YRDALDAYTRAIRLNP---YISEVWYDLGTLYETCNNQISD----------ALDAYRQAE 435

Query: 167 ERYTNSPYVKGARFYVTVGRN 187
                +P++   +  +     
Sbjct: 436 RLDPGNPHI---KARLDQLIK 453


>gi|88604167|ref|YP_504345.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
 gi|88189629|gb|ABD42626.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
          Length = 135

 Score = 35.9 bits (82), Expect = 5.8,   Method: Composition-based stats.
 Identities = 15/109 (13%), Positives = 36/109 (33%), Gaps = 14/109 (12%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            +    ++   F +A   F Q  ++      A  + +   F  + +GKYQ+A    E+  
Sbjct: 2   NRGRALIELTRFEEAISTFEQVIQNN--QNHAA-AWISKGFALFESGKYQEALEAFEQGG 58

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
              P+   +            +   D+  +    +  L    + ++   
Sbjct: 59  LINPDDPGI-----------WEQQGDILIELGRFEEALSAFEKAIQMRP 96


>gi|52081023|ref|YP_079814.1| integral membrane protein GluP [Bacillus licheniformis ATCC 14580]
 gi|52786400|ref|YP_092229.1| YqgP [Bacillus licheniformis ATCC 14580]
 gi|319645019|ref|ZP_07999252.1| YqgP protein [Bacillus sp. BT1B_CT2]
 gi|52004234|gb|AAU24176.1| TPR motif integral membrane protein GluP [Bacillus licheniformis
           ATCC 14580]
 gi|52348902|gb|AAU41536.1| YqgP [Bacillus licheniformis ATCC 14580]
 gi|317392828|gb|EFV73622.1| YqgP protein [Bacillus sp. BT1B_CT2]
          Length = 512

 Score = 35.9 bits (82), Expect = 5.8,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 32/118 (27%), Gaps = 25/118 (21%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKE------------- 70
           + IF         G      ++  +       Y+   YEK    LKE             
Sbjct: 374 VLIFVIGGGALYFGTHSAPVQENAMLHQAAKWYEEGEYEKVKDALKEAGSKPDASSDTLR 433

Query: 71  ---------QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
                      +  A + F       P +  A  SL   A++    G+  +A    E 
Sbjct: 434 LLAYSEIRLGEYENAEKRFEAVVEKDP-SDHA--SLYSLAWLYTQRGELAKAEQSIER 488


>gi|186681322|ref|YP_001864518.1| hypothetical protein Npun_R0837 [Nostoc punctiforme PCC 73102]
 gi|186463774|gb|ACC79575.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102]
          Length = 654

 Score = 35.9 bits (82), Expect = 5.8,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 42/113 (37%), Gaps = 16/113 (14%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
           Y+R  Y +A++++K  + + A           +FP +  +  + L          +Y QA
Sbjct: 497 YERAYYNRALVYIKLNDLNNARNNLEAAIREENFP-SAYSELARL-----YILEKEYPQA 550

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
            +L  + +   P    VD V Y    +  + +    + Q+        +   +
Sbjct: 551 IALLLKGLKLQP----VDRVKY----ALFKNLGWAQFGQKRYADAESTLREAI 595


>gi|322493662|emb|CBZ28952.1| conserved TPR domain protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 402

 Score = 35.9 bits (82), Expect = 5.9,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 39/126 (30%), Gaps = 18/126 (14%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYS 106
           ++  +     ++  K    + +  + +A  Y+ +     P      A ++          
Sbjct: 123 NNPYEGLTAEQIKNKGNELMSQAKYKEAIAYYTKAIELQPDNAVFFANRAA-----AHTH 177

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
              Y  A    E  I   PE        Y    SY+++   + Y Q      +   ++  
Sbjct: 178 LKDYNNAIIDCERAIIINPE--------YSK--SYSRLGTALFY-QENYSRAVDAFTKAC 226

Query: 167 ERYTNS 172
           E   ++
Sbjct: 227 ELDPDN 232


>gi|317474833|ref|ZP_07934103.1| TPR repeat-containing protein [Bacteroides eggerthii 1_2_48FAA]
 gi|316908971|gb|EFV30655.1| TPR repeat-containing protein [Bacteroides eggerthii 1_2_48FAA]
          Length = 481

 Score = 35.9 bits (82), Expect = 5.9,   Method: Composition-based stats.
 Identities = 15/114 (13%), Positives = 32/114 (28%), Gaps = 20/114 (17%)

Query: 71  QNFSKAY-EYFNQCSRDFPFAGVARKSLLM----SAFVQYSAGKYQQAASLGEEYITQYP 125
           + + +A  EY     +          S +      A        Y QA +  ++Y     
Sbjct: 285 KKYDRAIVEYGKALEK--------DSSQIDVWREIADAYELKNDYAQAIAAYQKYYDTLS 336

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPY------DQ-RATKLMLQYMSRIVERYTNS 172
           + K      + +G  Y               D+  A +      + +  +  +S
Sbjct: 337 QDKKTPEALFQLGRLYYGQGTSQDTLTVQPADRMTALQAADSVFALVARQAPDS 390


>gi|302658665|ref|XP_003021034.1| hypothetical protein TRV_04899 [Trichophyton verrucosum HKI 0517]
 gi|291184909|gb|EFE40416.1| hypothetical protein TRV_04899 [Trichophyton verrucosum HKI 0517]
          Length = 493

 Score = 35.9 bits (82), Expect = 5.9,   Method: Composition-based stats.
 Identities = 19/158 (12%), Positives = 48/158 (30%), Gaps = 31/158 (19%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF---PFAGVARKSLLMSAFVQYS 106
           S +D+     +  +      +QN+  A + + Q    +   P +    ++ +        
Sbjct: 2   SQSDIEAATALKLQGNKCFAQQNWPAALDLYTQAIELYDKEP-SFYCNRAQV-----HVK 55

Query: 107 AGKYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
              +  A +   + I   P      Y   Y+   ++   ++          +  L     
Sbjct: 56  LEAFGFAIADATKAIELDPS-----YVKAYWRRAVANTAILNS--------RAALNDFKT 102

Query: 165 IVERYTNSPYVKGARFYVTVG----RNQLAAKEVEIGR 198
           +V++  N      A+  +       R     K +E+  
Sbjct: 103 VVKKAPNDR---DAKLKLAECEKLVRRIEFEKAIEVAD 137


>gi|254516175|ref|ZP_05128235.1| Methyltransferase domain family protein [gamma proteobacterium
           NOR5-3]
 gi|219675897|gb|EED32263.1| Methyltransferase domain family protein [gamma proteobacterium
           NOR5-3]
          Length = 517

 Score = 35.9 bits (82), Expect = 5.9,   Method: Composition-based stats.
 Identities = 25/211 (11%), Positives = 65/211 (30%), Gaps = 39/211 (18%)

Query: 61  YEKAVLFLKE-----QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           + +A+  L       + + +A   + +            +     A     AG+ + A  
Sbjct: 126 FSEALNNLASAFTDLKQYKEALGCYQELVNR---GEADAEVYANLARALKGAGQTENALE 182

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
                +   P   +               + ++  D       ++     +        V
Sbjct: 183 ALRRALQLNPLYTDA-----------FNDLGNLLNDMGEHDEAIKAYRSALSLEPKHRKV 231

Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
                 + + R+  A              ++ AA+  ++ ++       H+E+A+     
Sbjct: 232 L-----LNLARSLSAMY------------KHKAALIVYKELVTLEP---HSEDALRGTAN 271

Query: 236 AYVALALMDEAREVVSLIQERYPQGYWARYV 266
             +AL+L  EA + +  + E  P    A+++
Sbjct: 272 TLLALSLDQEAGDYLQRLLELKPHDKTAKHL 302


>gi|186686398|ref|YP_001869594.1| hypothetical protein Npun_R6379 [Nostoc punctiforme PCC 73102]
 gi|186468850|gb|ACC84651.1| Tetratricopeptide TPR_2 repeat protein TprN [Nostoc punctiforme PCC
           73102]
          Length = 291

 Score = 35.9 bits (82), Expect = 5.9,   Method: Composition-based stats.
 Identities = 8/63 (12%), Positives = 20/63 (31%), Gaps = 9/63 (14%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           ++       +++N+  A   +    +   + P        L       Y  GK   A + 
Sbjct: 104 LFALGSANFQQKNYQAAVVNYQDGLKLKPNDPEG------LFDLGNAYYLLGKLPDAIAQ 157

Query: 117 GEE 119
            ++
Sbjct: 158 YDK 160


>gi|154300656|ref|XP_001550743.1| hypothetical protein BC1G_10916 [Botryotinia fuckeliana B05.10]
 gi|150856523|gb|EDN31715.1| hypothetical protein BC1G_10916 [Botryotinia fuckeliana B05.10]
          Length = 651

 Score = 35.9 bits (82), Expect = 5.9,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 23/58 (39%), Gaps = 5/58 (8%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
              ++ +AV  LK   +  A +  +          +A + +L  A+  Y  GK   AA
Sbjct: 38  PNALHTRAVALLKLDRYDDALKALDDGGD-----KLASQCILERAYALYKTGKLADAA 90


>gi|146094018|ref|XP_001467120.1| TPR domain protein [Leishmania infantum JPCM5]
 gi|134071484|emb|CAM70173.1| conserved TPR domain protein [Leishmania infantum JPCM5]
 gi|322501216|emb|CBZ36295.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 408

 Score = 35.9 bits (82), Expect = 5.9,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 39/126 (30%), Gaps = 18/126 (14%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYS 106
           ++  +     ++  K    + +  + +A  Y+ +     P      A ++          
Sbjct: 123 NNPYEGLTAEQIKNKGNELMSQAKYKEAIAYYTKAIELQPDNAVFFANRAA-----AHTH 177

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
              Y  A    E  I   PE        Y    SY+++   + Y Q      +   ++  
Sbjct: 178 LKDYNNAIIDCERAIIINPE--------YSK--SYSRLGTALFY-QENYSRAVDAFTKAC 226

Query: 167 ERYTNS 172
           E   ++
Sbjct: 227 ELDPDN 232


>gi|145522285|ref|XP_001446990.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124414483|emb|CAK79593.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1362

 Score = 35.9 bits (82), Expect = 5.9,   Method: Composition-based stats.
 Identities = 21/162 (12%), Positives = 50/162 (30%), Gaps = 40/162 (24%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
              K+++A    +  I + PE+ ++   YY   ++  +M R         +  L+     
Sbjct: 554 KMNKFEEALEYYDSAIQKNPENSDI---YYGKAITLDEMNR--------FEEALENYDSA 602

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY----S 221
           +++   + Y                        +Y  +   ++ + RF+  L NY     
Sbjct: 603 IQKNPENQY------------------------FYYGKATTLSKMNRFEEALENYDSAIQ 638

Query: 222 DAEHAEEAMARLVEAYVALALMDEA-REVVSLIQERYPQGYW 262
                 +           +   +EA +     IQ+      +
Sbjct: 639 KNPEKYDFYYGKAITLDEMNRFEEALQNYDQAIQKNPEDSRY 680



 Score = 35.9 bits (82), Expect = 5.9,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 64/188 (34%), Gaps = 27/188 (14%)

Query: 45  DVYLDSVTDVRYQREVYE-KAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAF 102
           + Y  ++       + Y  KA    K      A E ++    ++   +    +     A+
Sbjct: 785 ENYDSAIKKNPENSDYYNGKAYTLQKLNRLETALENYDSAIQKNPENSDYYNR----KAY 840

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y+  +  +A       I Q P  +   Y Y+   ++  +M R V          L+Y 
Sbjct: 841 TLYALNRLDEALENYNSSIQQNP--EESSY-YFNKAITLHKMNRLV--------ESLEYF 889

Query: 163 SRIVERYT-NSPYVKG---ARFYVTVGRNQLAAKEVEI------GRYYLKRGEYVAAIPR 212
              +++   +S Y  G       +   R  L   +  I       RYY  +   +  + R
Sbjct: 890 DEAIKKNPEDSEYYNGKAFTLRKMNRVREALQNFDSAIQKFPEDSRYYFNKAITLNTMNR 949

Query: 213 FQLVLANY 220
           F+  L NY
Sbjct: 950 FEEALENY 957



 Score = 35.9 bits (82), Expect = 6.8,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 57/172 (33%), Gaps = 26/172 (15%)

Query: 60   VYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
             Y KA        F +A E ++    ++   +          A    +  + ++A    +
Sbjct: 1161 YYNKATTLNNMNRFEEALENYDSAIQKNPEDSRY----YFNKAITLNTMNRLEKALENYD 1216

Query: 119  EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY---- 174
              I + P  ++  Y Y+   ++  +M R         +  L+   + +++   + Y    
Sbjct: 1217 SAIQKNP--EDSRY-YFNKAITLNKMNR--------YEEALKNYDQAIQKDPENSYYYNG 1265

Query: 175  VKGARFYVTVGRNQLAAKEVEIGR-----YYLKRGE-YVAAIPRFQLVLANY 220
                   +      L   ++ I +     YY       +  + RF+  L NY
Sbjct: 1266 KADTLQKMNSLDEALENYDLAIQKNPENSYYYNGKADTLQKMNRFEEALENY 1317


>gi|284050166|ref|ZP_06380376.1| tetratricopeptide TPR_2 [Arthrospira platensis str. Paraca]
          Length = 1037

 Score = 35.9 bits (82), Expect = 5.9,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 77/229 (33%), Gaps = 47/229 (20%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF---PFAGVARKSLLMSAFVQYSA 107
                   E++++ V   +   F +A++ + +    +        A   L     + +S 
Sbjct: 123 TAKQSQAEELFKQGVQQFQNNEFQEAFKSWQEALILYQEVNNHRGAINCLGKLGNIYHSL 182

Query: 108 GKYQQAASLGEEYI-----TQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRAT-- 155
           G+Y+QA S  ++ +     TQYP+ +   Y     V Y +G           +DQ     
Sbjct: 183 GQYEQAISAHQQCLAVARKTQYPQGEANAYSSLAHVCYAIG----------QHDQALFGY 232

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           +  L+   +I  R+            +    + L   E  I        +   A  + + 
Sbjct: 233 QQALEITQKINYRFGE----VNVLGSLGQLYSTLGRYEEAIA----HTKK---AAEKAEE 281

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMD-------EAREVVSLIQERY 257
           +   + +       +A L  AY A+   D       +A ++   I   +
Sbjct: 282 LGYKFGETSF----LASLGSAYTAIKQYDNATATHHQALKIARSINYNF 326


>gi|228993867|ref|ZP_04153770.1| TPR domain protein [Bacillus pseudomycoides DSM 12442]
 gi|228999903|ref|ZP_04159475.1| TPR domain protein [Bacillus mycoides Rock3-17]
 gi|229007456|ref|ZP_04165053.1| TPR domain protein [Bacillus mycoides Rock1-4]
 gi|228753844|gb|EEM03285.1| TPR domain protein [Bacillus mycoides Rock1-4]
 gi|228759845|gb|EEM08819.1| TPR domain protein [Bacillus mycoides Rock3-17]
 gi|228765818|gb|EEM14469.1| TPR domain protein [Bacillus pseudomycoides DSM 12442]
          Length = 503

 Score = 35.9 bits (82), Expect = 5.9,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 75/222 (33%), Gaps = 49/222 (22%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           E+A  +++     +A       ++D+P  ++G         A   +  G   +A  L E 
Sbjct: 155 EQANRYIRNGQLEEAIATLEVVTKDYPEFWSGYN-----NLAIAHFQLGNVDKALKLTEM 209

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS------- 172
            + + P +        +  +    +     Y     K +     ++   Y  S       
Sbjct: 210 ILEKNPGN--------MHALCNTLIFL---YSIGEHKQVEALAKQLESVYPMSFEHRLKL 258

Query: 173 -------PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
                   +   A  ++ + + Q    E ++  YY     Y A       ++ +   AE 
Sbjct: 259 GTTFATIGHFASAYKWLRLLKRQ--GYEGDVSFYYWF--AYSA------YMIKDQQTAEK 308

Query: 226 AEEAMARLV------EAYVALALMDEAREVV-SLIQERYPQG 260
             +++  L       E + AL L DE + V+   +++ + Q 
Sbjct: 309 MWQSVVELHPDKKGKEPWNALHLADEGQNVLFEELRKSFQQS 350


>gi|224372480|ref|YP_002606852.1| von Willebrand factor, type A [Nautilia profundicola AmH]
 gi|223588415|gb|ACM92151.1| von Willebrand factor, type A [Nautilia profundicola AmH]
          Length = 246

 Score = 35.9 bits (82), Expect = 5.9,   Method: Composition-based stats.
 Identities = 10/69 (14%), Positives = 25/69 (36%), Gaps = 4/69 (5%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
           +    +  Q+ +Y  A  + K   + KA   +N+ ++      +  +           +G
Sbjct: 38  EEYLKLNSQKALYNAANAYYKAGRYKKAIALYNKINKK----DLQFQKYYNLGNAYALSG 93

Query: 109 KYQQAASLG 117
           +Y +A    
Sbjct: 94  EYIKAIESY 102


>gi|260793011|ref|XP_002591507.1| hypothetical protein BRAFLDRAFT_105273 [Branchiostoma floridae]
 gi|229276713|gb|EEN47518.1| hypothetical protein BRAFLDRAFT_105273 [Branchiostoma floridae]
          Length = 921

 Score = 35.9 bits (82), Expect = 5.9,   Method: Composition-based stats.
 Identities = 32/241 (13%), Positives = 72/241 (29%), Gaps = 48/241 (19%)

Query: 38  WERQSSRDVYLDSVTDVRYQRE----VYEKAVLFLKEQNFSKAYEYFN-QCSRD------ 86
            E + +   Y D++T+V    E    +++         ++  A  +F     +       
Sbjct: 419 CEYRKAIGYYKDALTEVEDDNEKITLLHDLGYALCSVGDYENAIIHFEDAVQKREAIQCN 478

Query: 87  ----FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY-------PESKNVDYVYY 135
               F  +      LL  A+     G Y +A    ++ +  Y        +  ++     
Sbjct: 479 VTPDFAGSLY----LLGKAWAN--LGHYSKAIGYYDQALQMYRGLGDQDTQHPDIAASLE 532

Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
            +G +Y+  I D        +  ++    +            A   +      L    + 
Sbjct: 533 ALGEAYSH-IGDYRRSFSNIEQAMEMFMNV-----YGEAAFRAHPRIATCLGSLGGVLLS 586

Query: 196 IGRYYLKRGEYVAAIPRFQLVLAN----YSDAEHAEE---AMARLVEAYVALALMDEARE 248
           +G        Y  A+  F+  L      Y  +    +   A+  L  ++  L    +A +
Sbjct: 587 LGD-------YQKALRYFKKALQMERSIYGQSTAHPKIATALLNLATSWGKLGDHRKAID 639

Query: 249 V 249
            
Sbjct: 640 Y 640


>gi|254168890|ref|ZP_04875730.1| Tetratricopeptide repeat family [Aciduliprofundum boonei T469]
 gi|197622154|gb|EDY34729.1| Tetratricopeptide repeat family [Aciduliprofundum boonei T469]
          Length = 1297

 Score = 35.9 bits (82), Expect = 5.9,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 59/190 (31%), Gaps = 35/190 (18%)

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
           L  A   Y   +Y  A    E  +      ++ D  + L+GM Y ++           + 
Sbjct: 486 LDLARAYYIVSRYDDAKKTLERGLKL---KEDSDEGWNLLGMIYYKL--------GDLEN 534

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY--------------LKR 203
                 +      N+         +     +L      +  YY               ++
Sbjct: 535 ARYSFEKASTINPNNKKYW---KNLAWVMEKLGKYNEAV-EYYEKALELDPNDMRLWYEK 590

Query: 204 GEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEAREVV-SLIQERYP 258
           G  +  I R++  + ++  A        +A+    ++ + L   DEA ++  SLI+    
Sbjct: 591 GICLKKIKRYEEAIKSFDSALKLNSEFTKALYEKGDSLIKLGNYDEALKIFTSLIKLERG 650

Query: 259 QGYW-ARYVE 267
              +  +   
Sbjct: 651 NSEYIYKRAY 660


>gi|196016354|ref|XP_002118030.1| hypothetical protein TRIADDRAFT_62058 [Trichoplax adhaerens]
 gi|190579417|gb|EDV19513.1| hypothetical protein TRIADDRAFT_62058 [Trichoplax adhaerens]
          Length = 1314

 Score = 35.9 bits (82), Expect = 5.9,   Method: Composition-based stats.
 Identities = 10/68 (14%), Positives = 26/68 (38%), Gaps = 12/68 (17%)

Query: 61  YEK-AVLFLKEQNFSKAYEYFNQ--------CSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           Y +  +++  + N+ +A     +          R  P      +S        ++ GK+ 
Sbjct: 104 YNEIGIIYYDQGNYKEAISMLEKSLNIRLSILDRHHP---DITRSYNNVGNAYFNQGKHD 160

Query: 112 QAASLGEE 119
           +A S+ ++
Sbjct: 161 EAISIYDK 168


>gi|189463811|ref|ZP_03012596.1| hypothetical protein BACINT_00144 [Bacteroides intestinalis DSM
           17393]
 gi|189438761|gb|EDV07746.1| hypothetical protein BACINT_00144 [Bacteroides intestinalis DSM
           17393]
          Length = 340

 Score = 35.9 bits (82), Expect = 5.9,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 35/99 (35%), Gaps = 6/99 (6%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
           ++++ D+      D   +  +  +  +        +A   +   +   PF     ++ L 
Sbjct: 202 KEATEDIDAILSQDPDEEAALLLRGKVKETTGQQEEAETDYRYVTELNPFN---EQAFLC 258

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
              +     KY +A +L +E I   P   N    Y+  G
Sbjct: 259 LGQLYIVQKKYPEAIALFDEAIELNP---NFAQAYHERG 294


>gi|115963458|ref|XP_001196240.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 526

 Score = 35.9 bits (82), Expect = 5.9,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 49/160 (30%), Gaps = 24/160 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKS 96
              +S++V  +   +   +R    +A+  + E N  +A + F +     P +    A+++
Sbjct: 156 MGDTSKEVTDEMQDEANSKR---SEAMAAVSEGNIEEAIKIFTEAIEINPHSALLHAKRA 212

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
                       K   A    ++ I   P+S     VY   G ++              +
Sbjct: 213 S-----CFVRLNKPNAAIRDCDKGIDLNPDS---AQVYKWRGKAH--------RLLGHWE 256

Query: 157 LMLQYMSRIVER-YTNSPY--VKGARFYVTVGRNQLAAKE 193
              + +    +  Y  S Y  +K                E
Sbjct: 257 EAFRDLQMACKLDYDESAYEMLKEVEPRAKKIVEHKRKYE 296


>gi|31543672|ref|NP_789800.1| synaptonemal complex protein SC65 [Mus musculus]
 gi|81900983|sp|Q8K2B0|SC65_MOUSE RecName: Full=Synaptonemal complex protein SC65; AltName:
           Full=Leprecan-like protein 4
 gi|21594430|gb|AAH31856.1| RIKEN cDNA 1110036O03 gene [Mus musculus]
 gi|123236009|emb|CAM23031.1| SC65 synaptonemal complex protein (Sc65-pending) [Mus musculus]
 gi|148670616|gb|EDL02563.1| RIKEN cDNA 1110036O03 [Mus musculus]
          Length = 443

 Score = 35.9 bits (82), Expect = 5.9,   Method: Composition-based stats.
 Identities = 7/39 (17%), Positives = 19/39 (48%), Gaps = 1/39 (2%)

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVD-YVYYLVGM 139
           +  + A + ++A +    ++ + P+ +    Y+ Y  GM
Sbjct: 156 YAHFKANRLEKAVAAAYTFLQRNPKHELTAKYLNYYRGM 194


>gi|82544265|ref|YP_408212.1| tetratricopeptide repeat protein [Shigella boydii Sb227]
 gi|81245676|gb|ABB66384.1| putative heat shock protein [Shigella boydii Sb227]
 gi|332094767|gb|EGI99811.1| tetratricopeptide repeat family protein [Shigella boydii 3594-74]
          Length = 389

 Score = 35.9 bits (82), Expect = 5.9,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 63/186 (33%), Gaps = 36/186 (19%)

Query: 64  AVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
              ++    + +A + FNQ     DF    + +   +  A       ++Q+A  + E  +
Sbjct: 114 GRDYMAAGLYDRAEDMFNQLTDETDFRIGALQQLLQIYQA-----TSEWQKAIDVAERLV 168

Query: 122 TQYPESKNVDYVYYL--VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
               + + V+  ++   + + +     D+       K                       
Sbjct: 169 KLGKDKQRVEIAHFYCELALQHM-ASDDLDRAMTLLKKGAAAD----------------- 210

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                 +N+ A   + +GR ++ +GEY  A+   Q V++   D E   E +  L   Y  
Sbjct: 211 ------KNR-ARVSIMMGRVFMAKGEYAKAVESLQRVIS--QDRELVSETLEMLQTCYQQ 261

Query: 240 LALMDE 245
           L    E
Sbjct: 262 LGKTAE 267


>gi|325179912|emb|CCA14314.1| anaphasepromoting complex subunit putative [Albugo laibachii Nc14]
          Length = 1195

 Score = 35.9 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 20/58 (34%), Gaps = 2/58 (3%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           T+   + + YE A        + +A +         P +  A    L   +  Y AG+
Sbjct: 641 TNNWVELDQYEAAKAAFDLGEYLRANQILKALEDREP-SCSAPDEFLSL-YALYLAGE 696


>gi|317182378|dbj|BAJ60162.1| hypothetical protein HPF57_1088 [Helicobacter pylori F57]
          Length = 331

 Score = 35.9 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 22/145 (15%), Positives = 61/145 (42%), Gaps = 19/145 (13%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS----RDFPFAGVARK 95
           +++     ++   D+  Q+E++++A+  LK++++++A E          R + +   A  
Sbjct: 189 KKTQEKAKIEFDKDLSKQKEIFQEALTLLKDKSYAEARERLLWLEANSYRLY-YVRYA-- 245

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
                  V Y   KY++A    +E      ++  +  + +    ++ ++  D  Y     
Sbjct: 246 ----LGEVAYGEKKYREAIKYYKESALLNKKASYMPVLLWHTAWAFKKIKDDQNY----- 296

Query: 156 KLMLQYMSRIVERYTNSPYVKGARF 180
               ++++ +   Y +S   K A+ 
Sbjct: 297 ---YKFLNTLQHLYPSSEQAKMAKK 318


>gi|315185556|gb|EFU19325.1| putative transcriptional regulator, Crp/Fnr family [Spirochaeta
           thermophila DSM 6578]
          Length = 325

 Score = 35.9 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 17/137 (12%), Positives = 46/137 (33%), Gaps = 2/137 (1%)

Query: 5   LGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKA 64
           LGR +  +    + + +    +    A     G    S         +    +++ Y +A
Sbjct: 150 LGRYLAYYPDGVH-VEEVKAALARVQAAQARGGTGALSVPSPEPRKPSLSSAEKDFY-EA 207

Query: 65  VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
                ++ + +A   F + +       V R++L  S     +  +Y +       +   +
Sbjct: 208 ESLFGQERYEEALASFMRIAEGSDQEDVRRRALFESGRCLMAMARYDEVIQHYSRFARDF 267

Query: 125 PESKNVDYVYYLVGMSY 141
            ++       +L+  +Y
Sbjct: 268 SDAPETSEALFLIARAY 284


>gi|307293851|ref|ZP_07573695.1| glycosyl transferase family 2 [Sphingobium chlorophenolicum L-1]
 gi|306880002|gb|EFN11219.1| glycosyl transferase family 2 [Sphingobium chlorophenolicum L-1]
          Length = 717

 Score = 35.9 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 54/188 (28%), Gaps = 48/188 (25%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS--AFVQYSAGKYQQAASLGEEY 120
                +++ ++++A   F   SR  P      +  L    A      G+  +A       
Sbjct: 16  AGGEAMEKGDWAEASRLFQYASRLRP-----ERVELQVQHAHALKEMGRKDEALVAYAR- 69

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
                 +   D   Y +G+     +R    D+      +    R++ER  +      A  
Sbjct: 70  ------ASGSDDGLYHLGL-----LRLQSGDRTG---AMDAWVRLLERTPDHEAALIALS 115

Query: 181 Y-----------VTVGR----NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN-YSDAE 224
                       +   R      LA                 + I R Q++L    SD +
Sbjct: 116 RHGLTHHLPRSLMNDLRMQHHESLAHH----------INALSSLIERAQILLQEGVSDYQ 165

Query: 225 HAEEAMAR 232
           H   A+  
Sbjct: 166 HIRSALML 173


>gi|317051708|ref|YP_004112824.1| tetratricopeptide repeat-containing protein [Desulfurispirillum
           indicum S5]
 gi|316946792|gb|ADU66268.1| Tetratricopeptide TPR_1 repeat-containing protein
           [Desulfurispirillum indicum S5]
          Length = 917

 Score = 35.9 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 71/231 (30%), Gaps = 71/231 (30%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDF-PFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117
           +A+     Q++ +      +    F   A    ++L +     Y+AG+Y +A        
Sbjct: 592 QALSMFHAQDYDRTLMVLERFQERFEADAYYRERALRLMGDAHYNAGRYDRAQRYYARVS 651

Query: 118 ---------------EEY------ITQYPESKN-----VDYVY----------YLVGMSY 141
                          + +      ++++  S +       Y Y          Y    S+
Sbjct: 652 SDSFHSGYFNSLIMQDRFREVETYVSEHQASMDRATLSSAYAYLSRKYVELGDYQRAQSH 711

Query: 142 AQMIRDVPYDQRATKLMLQYMSR-IVERYTNSPYVKGARFYVTVGRNQLAAKE------- 193
            + I D        +      +R ++ER     Y               A          
Sbjct: 712 VERIGD--------RDAFVGFARVLLER---GEY--------DFVVRFAAQHREQHPQLR 752

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
             +G  YL++G Y  A    Q +L N     + E+A    +EA +AL   D
Sbjct: 753 YYLGMAYLRQGNYRDAYLFLQQMLEN---PNYREQARHHAIEASMALGTPD 800


>gi|228961385|ref|ZP_04122999.1| TPR domain protein [Bacillus thuringiensis serovar pakistani str.
           T13001]
 gi|229050819|ref|ZP_04194371.1| TPR domain protein [Bacillus cereus AH676]
 gi|229130403|ref|ZP_04259361.1| TPR domain protein [Bacillus cereus BDRD-Cer4]
 gi|229147684|ref|ZP_04276027.1| TPR domain protein [Bacillus cereus BDRD-ST24]
 gi|229153313|ref|ZP_04281491.1| TPR domain protein [Bacillus cereus m1550]
 gi|228629917|gb|EEK86568.1| TPR domain protein [Bacillus cereus m1550]
 gi|228635697|gb|EEK92184.1| TPR domain protein [Bacillus cereus BDRD-ST24]
 gi|228653102|gb|EEL08982.1| TPR domain protein [Bacillus cereus BDRD-Cer4]
 gi|228722475|gb|EEL73868.1| TPR domain protein [Bacillus cereus AH676]
 gi|228798270|gb|EEM45269.1| TPR domain protein [Bacillus thuringiensis serovar pakistani str.
           T13001]
          Length = 515

 Score = 35.9 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 76/224 (33%), Gaps = 53/224 (23%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           E+A  +++     +A       ++D+P  ++G         A   + +G   +A  L E 
Sbjct: 167 EEANRYIRNGQLEEAIATLEIVTKDYPEFWSGHN-----NLAIAHFQSGNVDKALKLTEM 221

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS------- 172
            + + P +        +  +    +     Y     K +     ++V  Y  S       
Sbjct: 222 ILEKNPGN--------IHALCNTLIFL---YSIGEHKQVEALAGQLVSVYPISFEHRLKL 270

Query: 173 -------PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA--------AIPRFQLVL 217
                   Y + A  +  + + Q    E ++  YY     Y A        A   +Q V+
Sbjct: 271 GTTLATIGYFEHAYKWFKLLKRQ--GYEGDVSFYYWF--AYSAYMVKDQQLAEKMWQYVV 326

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVV-SLIQERYPQG 260
             + D +          E + AL L DE + V+   +++ + Q 
Sbjct: 327 ELHPDKKG--------KEPWNALNLADEGQNVLFEELRKSFQQS 362


>gi|228955396|ref|ZP_04117401.1| TPR domain protein [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|229072605|ref|ZP_04205807.1| TPR domain protein [Bacillus cereus F65185]
 gi|229082364|ref|ZP_04214827.1| TPR domain protein [Bacillus cereus Rock4-2]
 gi|229181413|ref|ZP_04308741.1| TPR domain protein [Bacillus cereus 172560W]
 gi|229193399|ref|ZP_04320347.1| TPR domain protein [Bacillus cereus ATCC 10876]
 gi|228590054|gb|EEK47925.1| TPR domain protein [Bacillus cereus ATCC 10876]
 gi|228601988|gb|EEK59481.1| TPR domain protein [Bacillus cereus 172560W]
 gi|228700796|gb|EEL53319.1| TPR domain protein [Bacillus cereus Rock4-2]
 gi|228710581|gb|EEL62554.1| TPR domain protein [Bacillus cereus F65185]
 gi|228804188|gb|EEM50802.1| TPR domain protein [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
          Length = 515

 Score = 35.9 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 76/224 (33%), Gaps = 53/224 (23%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           E+A  +++     +A       ++D+P  ++G         A   + +G   +A  L E 
Sbjct: 167 EEANRYIRNGQLEEAIATLEIVTKDYPEFWSGHN-----NLAIAHFQSGNVDKALKLTEM 221

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS------- 172
            + + P +        +  +    +     Y     K +     ++V  Y  S       
Sbjct: 222 ILEKNPGN--------IHALCNTLIFL---YSIGEHKQVEALAGQLVSVYPISFEHRLKL 270

Query: 173 -------PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA--------AIPRFQLVL 217
                   Y + A  +  + + Q    E ++  YY     Y A        A   +Q V+
Sbjct: 271 GTTLATIGYFEHAYKWFKLLKRQ--GYEGDVSFYYWF--AYSAYMVKDQQLAEKMWQYVV 326

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVV-SLIQERYPQG 260
             + D +          E + AL L DE + V+   +++ + Q 
Sbjct: 327 ELHPDKKG--------KEPWNALNLADEGQNVLFEELRKSFQQS 362


>gi|213404614|ref|XP_002173079.1| signal recognition particle subunit Srp72 [Schizosaccharomyces
           japonicus yFS275]
 gi|212001126|gb|EEB06786.1| signal recognition particle subunit Srp72 [Schizosaccharomyces
           japonicus yFS275]
          Length = 560

 Score = 35.9 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 26/85 (30%), Gaps = 19/85 (22%)

Query: 47  YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ-CSRD-----------FPFAGVAR 94
            L   T+      +Y  A  +L  + +  A E       R            +PF     
Sbjct: 132 KLPFETNEEDHDFMYNVATRYLNLRQWDNAIELLQANIDRLKELGQDNKASIYPF----- 186

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEE 119
             LL   +     G+ ++A    +E
Sbjct: 187 --LLQLMYAFLQKGETEKALQTAKE 209


>gi|209526906|ref|ZP_03275425.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
 gi|209492685|gb|EDZ93021.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
          Length = 1037

 Score = 35.9 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 71/211 (33%), Gaps = 40/211 (18%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF---PFAGVARKSLLMSAFVQYSA 107
                   E++++ V   +  +F  A++ + +    +        A   L     + +S 
Sbjct: 123 TAKQSQAEELFKQGVQQFQNNDFQAAFKSWQEALILYQEVNNHRGAINCLGKLGNIYHSL 182

Query: 108 GKYQQAASLGEEYI-----TQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRAT-- 155
           G+Y+QA S  ++ +     TQYP+ +   Y     V Y +G           +DQ     
Sbjct: 183 GQYEQAISAHQQCLAVARKTQYPQGEANAYSSLAHVCYAIG----------QHDQALFGY 232

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           +  L+   +I  R+            +    + L   E  I            A  + + 
Sbjct: 233 QQALEITQKINYRFGE----VNVLGSLGQLYSTLGRYEEAIA-------HTKQAAEKAEE 281

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEA 246
           +   + +       +A L  AY A+   D A
Sbjct: 282 LGYKFGETSF----LASLGSAYTAIKQYDNA 308


>gi|254442833|ref|ZP_05056309.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
           DG1235]
 gi|198257141|gb|EDY81449.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
           DG1235]
          Length = 1080

 Score = 35.9 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 52/179 (29%), Gaps = 47/179 (26%)

Query: 98  LMSAFVQYSAGKYQQAA----SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
           L         G++ +A     +    Y   +P + +    +Y  G+S             
Sbjct: 506 LALGKAALKRGEFVEARTHFDAAIARYTRHHP-NPSSGEAHYYAGLS--------RRYLG 556

Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY------LKRGEYV 207
             +       R    Y                       E     YY        +G + 
Sbjct: 557 QFEEAYALFFRATWNY-----------------------EWRSAAYYELGCIDFAKGRFT 593

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV-SLIQERYPQGYWARY 265
           AA  + +  L    + ++  +A   L  A + L  ++ ARE +  +++       WA Y
Sbjct: 594 AARNQARSSLET--NTKNN-KAGVLLALALMELGELENAREALDEVLKRDALD-PWANY 648


>gi|254417461|ref|ZP_05031201.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
 gi|196175726|gb|EDX70750.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
          Length = 374

 Score = 35.9 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 58/152 (38%), Gaps = 20/152 (13%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
           +TD +  + + ++ +  L+  +F  A   F    +  P  G A    L  A       +Y
Sbjct: 1   MTDPKAVKFIIQQGMRCLQGGDFDAAVALFQDAVKLTPENGEAWTG-LGLALGH--LQRY 57

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY-DQRATKLMLQYMSRIVERY 169
           ++A +  ++     P+  ++             + R +   D    +  +    +++ER 
Sbjct: 58  EEAIASFDQAGVLNPQDASI------------WLNRGIVLSDWGKHEAAIASFDQVIERE 105

Query: 170 TNSPYVKGAR--FYVTVGRNQ--LAAKEVEIG 197
              P    +R    + +GRN+  LA+ +  I 
Sbjct: 106 PTHPEAWNSRGTSLMILGRNKEALASFDQAIA 137


>gi|195941926|ref|ZP_03087308.1| cell division control protein 27, putative [Borrelia burgdorferi
           80a]
          Length = 379

 Score = 35.9 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 72/212 (33%), Gaps = 36/212 (16%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           K+ N+ KA  Y+ +C    P       +L        +   Y++A  + EEY+   PE+ 
Sbjct: 70  KKNNYDKAIVYYQKCLVKHPSNNY---ALFGLGDCYRNLDNYKKATDIWEEYLKYDPENI 126

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV--------KGARF 180
               V   V  SY ++        +  +   Q   +++E   ++ Y            + 
Sbjct: 127 T---VLTRVAASYRKL--------KNFQKSKQTYLKVMELMPDNDYALVGIGHLYYDFKE 175

Query: 181 YVTVGRNQLAAKEVE-----------IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
           Y    +  L   E+            IG  Y K  E+   I  F+  L     +     A
Sbjct: 176 YKEALKYWLKMYELNQSKVDVRVLTSIGNCYRKLREFTRGICFFKKALEI---SPSNFYA 232

Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           +  L + Y       EA +    I E+ P+  
Sbjct: 233 VFGLADCYRGNKEYKEALKYWLDIIEKDPKNN 264


>gi|150388912|ref|YP_001318961.1| ADP-ribosylation/crystallin J1 [Alkaliphilus metalliredigens QYMF]
 gi|149948774|gb|ABR47302.1| ADP-ribosylation/Crystallin J1 [Alkaliphilus metalliredigens QYMF]
          Length = 506

 Score = 35.9 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 11/101 (10%), Positives = 38/101 (37%), Gaps = 15/101 (14%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ------YSAGK-YQQAASLGEE-- 119
           +E+N+ +A  +F + ++  P      K  +            Y     +++A    ++  
Sbjct: 390 QEKNYEEAVSHFEELTKKNPDVKKQEKIKMNIIEAYEGLGTKYLENDAFEEALKCFKKAL 449

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           +      + ++      + +SY  +  D+   ++  +  ++
Sbjct: 450 FYDLN--NPSI---LCNLALSYLNL-DDLNRAEKYARRAVE 484


>gi|32475228|ref|NP_868222.1| hypothetical protein RB8167 [Rhodopirellula baltica SH 1]
 gi|32445769|emb|CAD78500.1| conserved hypothetical protein [Rhodopirellula baltica SH 1]
          Length = 922

 Score = 35.9 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 67/226 (29%), Gaps = 37/226 (16%)

Query: 61  YEKAVLFLKEQNFSKAYE-YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y+ AV       +  A     ++  R       + +   +    Q + G Y  A     E
Sbjct: 84  YDDAVQQFCNGQYDAAATTAASEVER----GVWSERWPRLLIQCQLTQGDYADALQTYRE 139

Query: 120 YITQYPESKNVDYVYYLVGMS---YAQMIRDVPYDQRATKLMLQ-YMSRIVERY------ 169
            + +YP S  + Y+    G+    +  +  +V   +      +Q   +  + R       
Sbjct: 140 ALQRYPTSIALRYM----GLDVLRFNGLHDEVGTAEADLFAQMQRAFAGYITRDNLIAAG 195

Query: 170 ----TNSPYVKGARFYV---------TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
                     +                     LA  E+ I     ++G++  A    Q  
Sbjct: 196 RFLTGRGEDARKVLEMFYDRVRDRDPDYLDAYLATAELAI-----RKGDFQVAANTLQQA 250

Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           L    +       +A+ +E+    A  ++    + +  +  P   W
Sbjct: 251 LKLEEETPDLHHLLAKAMESSDGQAAAEQIAIALRINPQHLPSLQW 296


>gi|291572164|dbj|BAI94436.1| TPR domain protein [Arthrospira platensis NIES-39]
          Length = 1037

 Score = 35.9 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 77/229 (33%), Gaps = 47/229 (20%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF---PFAGVARKSLLMSAFVQYSA 107
                   E++++ V   +   F +A++ + +    +        A   L     + +S 
Sbjct: 123 TAKQSQAEELFKQGVQQFQNNEFQEAFKSWQEALILYQEVNNHRGAINCLGKLGNIYHSL 182

Query: 108 GKYQQAASLGEEYI-----TQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRAT-- 155
           G+Y+QA S  ++ +     TQYP+ +   Y     V Y +G           +DQ     
Sbjct: 183 GQYEQAISAHQQCLAVARKTQYPQGEANAYSSLAHVCYAIG----------QHDQALFGY 232

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
           +  L+   +I  R+            +    + L   E  I        +   A  + + 
Sbjct: 233 QQALEITQKINYRFGE----VNVLGSLGQLYSTLGRYEEAIA----HTKK---AAEKAEE 281

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMD-------EAREVVSLIQERY 257
           +   + +       +A L  AY A+   D       +A ++   I   +
Sbjct: 282 LGYKFGETSF----LASLGSAYTAIKQYDNATATHHQALKIARSINYNF 326


>gi|291567331|dbj|BAI89603.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Arthrospira
           platensis NIES-39]
          Length = 824

 Score = 35.9 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 13/90 (14%)

Query: 184 VGRNQLAAKEVE-IG-------RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
           + +  LA  E++ IG       R Y++R    A   RFQ V+      E   E +  L  
Sbjct: 300 MLKPALARGELQCIGATTLDEYRKYIERDA--ALERRFQPVMVGEPSVEETIEILFGLRS 357

Query: 236 AYVA---LALMDEAREVVSLIQERYPQGYW 262
           AY     L + DEA    + +  RY    +
Sbjct: 358 AYEQHHRLTISDEAVLAAAKLSHRYISDRF 387


>gi|222100798|ref|YP_002535366.1| Galactosyltransferase-related protein [Thermotoga neapolitana DSM
           4359]
 gi|221573188|gb|ACM24000.1| Galactosyltransferase-related protein [Thermotoga neapolitana DSM
           4359]
          Length = 693

 Score = 35.9 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 32/72 (44%), Gaps = 7/72 (9%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E++EK    +++++FSKA E   +   +          ++      Y  G+ ++A +  E
Sbjct: 2   EIFEKIQKAIEQKDFSKAKEMAEKIDDE--TERYNTLGMV-----HYYEGRKEEAQAFFE 54

Query: 119 EYITQYPESKNV 130
           + +   P   +V
Sbjct: 55  KALKINPVHDDV 66


>gi|297200375|ref|ZP_06917772.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
 gi|197709493|gb|EDY53527.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
          Length = 1082

 Score = 35.9 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 60/177 (33%), Gaps = 21/177 (11%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           E+   +     + +A     +     P   + +A +         Y  G+Y +A++  + 
Sbjct: 703 ERGDAYRIAGRYEEAVTELGRAVSLEPGYASALASRGQ-----ALYELGRYDEASAAFDG 757

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +   P     DY + LV  S A+   D        +  L  + R VE      +++   
Sbjct: 758 AVRLIP-----DYAWALVMRSRARRRLDDE------EGALADLRRAVEAEPGVDWIECEL 806

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                G ++ A  E    R   +  +Y  A+     ++         EEA+  L  A
Sbjct: 807 GLAQQGAHRFAEAEASFHRVLSRDPDYKIALAGLAAIV---QTRNSYEEALHYLDRA 860


>gi|117413993|dbj|BAF36501.1| NADPH oxidase regulator NoxR [Epichloe festucae]
          Length = 519

 Score = 35.9 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 13/102 (12%), Positives = 30/102 (29%), Gaps = 18/102 (17%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
            A+       F  A   F++            K L     +  + G++++A    +  I 
Sbjct: 12  AALARYDNNEFDDALGEFDKICD-------TSKILFNMGVIHATLGEHEKAVECYQRAIR 64

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
                + +   Y+  G+S   +           +  L   + 
Sbjct: 65  L---DQYLAVAYFQQGVSNFLL--------GDFEEALANFND 95


>gi|119953006|ref|YP_945215.1| mucin 2 precursor [Borrelia turicatae 91E135]
 gi|56786608|gb|AAW29406.1| P-209 [Borrelia turicatae]
 gi|119861777|gb|AAX17545.1| mucin 2 precursor [Borrelia turicatae 91E135]
          Length = 562

 Score = 35.9 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 57/168 (33%), Gaps = 23/168 (13%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
           Y + +       +K +N+S+A +  ++  + +P     +      A       +  +A  
Sbjct: 25  YSQRLIRIGQEEIKNKNYSQAIKILSEAIQKYP---KVQNGYYFLAIAYRENNQLTEAEG 81

Query: 116 LGEEYITQYPESKNVDYVYY-LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
              + I       ++DY  Y  +G    +        +    L ++Y S  V+   N   
Sbjct: 82  ALLDGIAI---GGDIDYKLYFELGNIMFK------RGEGYYNLAIKYYSNSVKNMPNYDK 132

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
                       N+ A   VE G+   K   Y  A   + + + +YS 
Sbjct: 133 A---------LLNR-ANSYVEQGKINFKEKNYKNAWDSYTMAIHDYSQ 170


>gi|16331251|ref|NP_441979.1| photosystem I assembly protein [Synechocystis sp. PCC 6803]
 gi|1001426|dbj|BAA10049.1| ycf37 gene product [Synechocystis sp. PCC 6803]
          Length = 175

 Score = 35.9 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 15/138 (10%), Positives = 52/138 (37%), Gaps = 16/138 (11%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA--FVQYSAGKYQQA 113
             +E Y+   ++L ++ +S++   F +  +         ++L+ +A  +  ++  ++  A
Sbjct: 51  TAQEYYQLGSIYLDKKLYSQSINLFQKALKMAEQVEPENQALIYNAMGYACFAQEQFDLA 110

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
               ++ +  YP+        Y++ ++    + +     +     L+     +    N+ 
Sbjct: 111 IRHYKDALKLYPD--------YVIALNNLANVYEKK---QMVNKALETYQETLAIEPNNK 159

Query: 174 YVKGARFYVTVGRNQLAA 191
               A+      + +L  
Sbjct: 160 ---VAQRRANSLKKRLVE 174


>gi|327287228|ref|XP_003228331.1| PREDICTED: tetratricopeptide repeat protein 26-like [Anolis
           carolinensis]
          Length = 540

 Score = 35.9 bits (82), Expect = 6.1,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 70/204 (34%), Gaps = 24/204 (11%)

Query: 65  VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
              L +++F+ A        +          + L   +  +  G Y++A    E    Q 
Sbjct: 30  EELLAQRDFTGAIALLE--FKRHV-GEQEEDTDLYIGYCAFHLGDYKRALEEYENLTKQA 86

Query: 125 PESKNVDYV-----YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
             + +V +V     Y+ +GM               ++L  + +  +  ++ +   +    
Sbjct: 87  GCNPDV-WVNLACTYFFLGM--YTQAEQAALKAPKSRLQNRLLFHLAHKFGDEKKLMSFH 143

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA---RLVEA 236
             +          ++ +   +  R  Y  AI  ++ +L +        E +A    +   
Sbjct: 144 QNLQDIT----EDQLSLASIHYMRSHYQEAIDIYKRILLD------NREYLALNVYVALC 193

Query: 237 YVALALMDEAREVVSLIQERYPQG 260
           Y  L   D ++EV+++  ++ P  
Sbjct: 194 YYKLDYYDVSQEVLAVYLQQVPDS 217


>gi|298531123|ref|ZP_07018524.1| TPR repeat-containing protein [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298509146|gb|EFI33051.1| TPR repeat-containing protein [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 169

 Score = 35.9 bits (82), Expect = 6.1,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 32/103 (31%), Gaps = 14/103 (13%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
               L      +A + F    + +P      + LL  A   +S     QA  L ++ +  
Sbjct: 78  GDSSLATGRPDQARDAFEVLRQRYP---DDARVLLKLARAYWSINDSGQALELVDQALEL 134

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
                + +Y  +L           +   Q   +  +    RI+
Sbjct: 135 ---RSDWEYALFLRA--------QILTSQGRFEEAINIYYRIL 166


>gi|218129049|ref|ZP_03457853.1| hypothetical protein BACEGG_00622 [Bacteroides eggerthii DSM 20697]
 gi|217988684|gb|EEC55003.1| hypothetical protein BACEGG_00622 [Bacteroides eggerthii DSM 20697]
          Length = 481

 Score = 35.9 bits (82), Expect = 6.1,   Method: Composition-based stats.
 Identities = 15/114 (13%), Positives = 32/114 (28%), Gaps = 20/114 (17%)

Query: 71  QNFSKAY-EYFNQCSRDFPFAGVARKSLLM----SAFVQYSAGKYQQAASLGEEYITQYP 125
           + + +A  EY     +          S +      A        Y QA +  ++Y     
Sbjct: 285 KKYDRAIVEYGKALEK--------DSSQIDVWREIADAYELKNDYAQAIAAYQKYYDTLS 336

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPY------DQ-RATKLMLQYMSRIVERYTNS 172
           + K      + +G  Y               D+  A +      + +  +  +S
Sbjct: 337 QDKKTPEALFQLGRLYYGQGTSQDTLTVQPADRMTALQAADSVFALVARQAPDS 390


>gi|156048400|ref|XP_001590167.1| hypothetical protein SS1G_08931 [Sclerotinia sclerotiorum 1980]
 gi|154693328|gb|EDN93066.1| hypothetical protein SS1G_08931 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 654

 Score = 35.9 bits (82), Expect = 6.1,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 5/63 (7%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           T       ++ +A+  LK   F  A +  ++         +A + +L  A+  Y  GK  
Sbjct: 33  TSKLDPDALHTRAIALLKLDRFDDALKALDEGGD-----KLASQCILERAYALYKTGKLA 87

Query: 112 QAA 114
            AA
Sbjct: 88  DAA 90


>gi|254286397|ref|ZP_04961355.1| hypothetical protein A33_1453 [Vibrio cholerae AM-19226]
 gi|150423564|gb|EDN15507.1| hypothetical protein A33_1453 [Vibrio cholerae AM-19226]
          Length = 392

 Score = 35.9 bits (82), Expect = 6.1,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 21/58 (36%), Gaps = 8/58 (13%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA--FVQYSAGKYQQAASLGEE 119
           A L L+E ++ +A     Q           +++ +  A     Y   +++ A    + 
Sbjct: 312 AQLLLQEGHYQQALAELEQVKERD------KQAQVALAKTRALYKLNQFEAALVQAKR 363


>gi|110637015|ref|YP_677222.1| outer membrane protein A [Cytophaga hutchinsonii ATCC 33406]
 gi|110279696|gb|ABG57882.1| outer membrane protein A [Cytophaga hutchinsonii ATCC 33406]
          Length = 734

 Score = 35.9 bits (82), Expect = 6.1,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 6/81 (7%)

Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
           K++ I  Y      +  AI  ++ V+ + +DA      M +L + Y  +   ++A    S
Sbjct: 27  KDLMIADYMYTHLAFATAIDHYEKVVEHNNDAAI----MVKLADCYRMIDEFEKAVACYS 82

Query: 252 L-IQER-YPQGYWARYVETLV 270
           + I+   +P   +  Y ETL+
Sbjct: 83  IAIKSNSFPNAAYPHYAETLM 103


>gi|154247676|ref|YP_001418634.1| TPR repeat-containing protein [Xanthobacter autotrophicus Py2]
 gi|154161761|gb|ABS68977.1| Tetratricopeptide TPR_2 repeat protein [Xanthobacter autotrophicus
           Py2]
          Length = 473

 Score = 35.9 bits (82), Expect = 6.1,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 21/55 (38%), Gaps = 3/55 (5%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           A   ++  ++  A   + +    F +     +  L  A + Y  G Y+ A S  E
Sbjct: 86  ARRAIEVGDYEAAIGVYERI--LF-YNPNLVRVKLELARLYYRLGAYESARSYFE 137


>gi|186682238|ref|YP_001865434.1| hypothetical protein Npun_R1829 [Nostoc punctiforme PCC 73102]
 gi|186464690|gb|ACC80491.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102]
          Length = 539

 Score = 35.9 bits (82), Expect = 6.1,   Method: Composition-based stats.
 Identities = 40/275 (14%), Positives = 80/275 (29%), Gaps = 78/275 (28%)

Query: 40  RQSSRDVYLDSVTDVRYQRE----VYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94
            + + +  L S     Y  E    +Y K    + ++  ++ A   + +  +         
Sbjct: 223 SKPTNNQLLKSFFQPEYNNEDSNTLYAKLGDEYFEKGEYTNAIVNYGKALKV-------T 275

Query: 95  KSLLMSAF----VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
            S +   +      Y  G Y+ A +   + I    +       Y   G++ +Q+ R    
Sbjct: 276 SSDINLYYKRGLTHYQIGDYEAAIADYSQAIQMNIQDAKS---YNKRGLALSQLGR---- 328

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL--------------------- 189
                +  +   ++ +    N   V  A       R+ +                     
Sbjct: 329 ----LEEAINDYTQAIRINPN---VAVAYKNRAEARSHIGDNQGAIEDYTQAIKINPHYA 381

Query: 190 -AAKEVEIGRY---------------------YLKRGEYVAAIPRFQLVLANYSDA---- 223
            A K   I RY                     Y KRG   + +  F+  + +Y+ A    
Sbjct: 382 DAYKNRGIARYLLSSQPGFPQAIKINPKDAIAYKKRGNARSDLGDFEGAIEDYTQAIQIN 441

Query: 224 EHAEEAMARLVEAYVALALMDEA-REVVSLIQERY 257
            +  +A      A+  L   + A  +    IQ  Y
Sbjct: 442 PNYADAYYNRDNAHSDLGDFERAIEDYTQAIQINY 476


>gi|333030665|ref|ZP_08458726.1| Tetratricopeptide TPR_1 repeat-containing protein [Bacteroides
           coprosuis DSM 18011]
 gi|332741262|gb|EGJ71744.1| Tetratricopeptide TPR_1 repeat-containing protein [Bacteroides
           coprosuis DSM 18011]
          Length = 273

 Score = 35.9 bits (82), Expect = 6.1,   Method: Composition-based stats.
 Identities = 17/115 (14%), Positives = 41/115 (35%), Gaps = 15/115 (13%)

Query: 24  LTIFFSIAVCFLVGWERQSSR-DVYLDSVTDVR-----YQREVYEKA-VLFLKEQNFSKA 76
           L IF S  +CF+     + S+ +  +DS+  ++        E+ + A       ++++ A
Sbjct: 4   LGIFLSFMLCFMFAVSAEDSKQEAPVDSLQAIQQSSFESNLEISKAAGDTAYVREDYATA 63

Query: 77  YEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
              + +  +          + L        Y      +A    E  +   P +++
Sbjct: 64  ASIYEELLQK------GVSAELYYNLGNSYYKIDNIAKAVLNYERAVLLSPNNRD 112


>gi|328953733|ref|YP_004371067.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfobacca
           acetoxidans DSM 11109]
 gi|328454057|gb|AEB09886.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfobacca
           acetoxidans DSM 11109]
          Length = 808

 Score = 35.9 bits (82), Expect = 6.1,   Method: Composition-based stats.
 Identities = 27/230 (11%), Positives = 68/230 (29%), Gaps = 48/230 (20%)

Query: 70  EQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
           +     A E   +  +  P  +     ++ + S     +    ++A ++ EE I   P+S
Sbjct: 147 QGKLEAAIEKLQEAKQLDPKKYEVYLIQAQMES-----NRKNLERAVAILEEGIKANPDS 201

Query: 128 KN-------VDYV---------YYLVGMSYAQMIRDVPYD-------QRATKLMLQYMSR 164
           +        V            Y+L  +        +  +               Q + +
Sbjct: 202 EELLLARGRVADAQKQFPEAEKYFLEAVKLEPQKASLQSELARHYILAGQLDKAEQALHQ 261

Query: 165 IVERYTNSPYVKGARFYV-----------TVGRNQLAAK------EVEIGRYYLKRGEYV 207
            +    ++     A                V ++  A           +  +YL R +  
Sbjct: 262 QLGLEPDNEKHAVALTKFLVGRGKVKEGEQVLKDFAAKHPDNNAARFALADFYLSRRQEG 321

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS-LIQER 256
             +   Q ++          +A  R+   + +   + EA ++ S +++E 
Sbjct: 322 RGLKTLQEIVDRDPTGPSGLQAKGRMAMVHASRGRVAEAEKLASEVLKEN 371


>gi|303236371|ref|ZP_07322961.1| tetratricopeptide repeat protein [Prevotella disiens FB035-09AN]
 gi|302483429|gb|EFL46434.1| tetratricopeptide repeat protein [Prevotella disiens FB035-09AN]
          Length = 224

 Score = 35.9 bits (82), Expect = 6.1,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 34/100 (34%), Gaps = 11/100 (11%)

Query: 23  ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
            + I   +A  FL           Y+    +     E+  KA    + Q F +A + F +
Sbjct: 32  IVAILIVVAGIFLY--------KNYVSEPREAEASTEL-AKAQQLFQTQQFDQALKGFQK 82

Query: 83  CSRDFPFAGVARKSLLMSA--FVQYSAGKYQQAASLGEEY 120
              D+        + L  A  +       +++A    +++
Sbjct: 83  VQSDYSSTDAGNLANLYVALCYAHQQKPDWKKALDNIQKF 122


>gi|242399003|ref|YP_002994427.1| O-linked glcnac transferase [Thermococcus sibiricus MM 739]
 gi|242265396|gb|ACS90078.1| O-linked glcnac transferase [Thermococcus sibiricus MM 739]
          Length = 343

 Score = 35.9 bits (82), Expect = 6.1,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 51/138 (36%), Gaps = 21/138 (15%)

Query: 4   VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYL----DSVTDVRYQRE 59
            +  A   + +  +Q  K    I    A+  + G    S  D+ L     S   +    +
Sbjct: 70  TVLSAYATYLSITWQKLKIVGGIILLFALGLVFGIWYISEPDLSLMDRFRSAESLEKSGK 129

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
               A  + K+ N+SKA E + +        G    +    A+    A KY++AA + E 
Sbjct: 130 YKAAARKYEKKGNYSKAAEMYEKL-------GWMESA----AWAYEKAEKYEKAAEIYE- 177

Query: 120 YITQYPESKNVDYVYYLV 137
               Y + K+    YYL 
Sbjct: 178 --QLYEKEKDT---YYLK 190


>gi|159026094|emb|CAO86323.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 666

 Score = 35.9 bits (82), Expect = 6.1,   Method: Composition-based stats.
 Identities = 22/159 (13%), Positives = 53/159 (33%), Gaps = 30/159 (18%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
            Y++   F + + ++ A   + Q  +  P       +L   A    +  +Y +A +  E+
Sbjct: 294 YYQQGQTFYQLKRYTDALNSYGQALKINP--DYLE-ALQGKADALLALKRYSEALNTYEK 350

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            I   P+S      +   G +  ++ ++        +  L+   R++     +      +
Sbjct: 351 AIQINPDSAW--QAWLGRGKALDKLDKN--------QEALESFERVLSLNPAASQAWQGK 400

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
                               YL+  +Y AA    + +L 
Sbjct: 401 -----------------ADIYLELQQYSAAQKALEKLLT 422


>gi|126341576|ref|XP_001378559.1| PREDICTED: similar to cartilage-associated protein (CASP)
           [Monodelphis domestica]
          Length = 423

 Score = 35.9 bits (82), Expect = 6.1,   Method: Composition-based stats.
 Identities = 5/48 (10%), Positives = 19/48 (39%), Gaps = 5/48 (10%)

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
           +  + A    +A +    ++ ++P+ + +        M+Y + +    
Sbjct: 171 YAYFKANNLPKAIAAAHTFLLKHPDDEMM-----QRNMAYYKSMPGAE 213


>gi|119484402|ref|ZP_01619019.1| TPR repeat protein [Lyngbya sp. PCC 8106]
 gi|119457876|gb|EAW38999.1| TPR repeat protein [Lyngbya sp. PCC 8106]
          Length = 566

 Score = 35.9 bits (82), Expect = 6.1,   Method: Composition-based stats.
 Identities = 19/145 (13%), Positives = 40/145 (27%), Gaps = 45/145 (31%)

Query: 61  YEKAVLFLKEQNFSKAYEYF------------------NQCSRDFPFAG----VARKSLL 98
           Y +    + E+ +  A E +                        + ++       R   L
Sbjct: 174 YHQGNALMNEERYESAVESYDRAVQLQPDNFEAWFNRGEMLMNQYKYSEAVASYDRALQL 233

Query: 99  ---------MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY-VYYLVGMSYAQMIRDV 148
                              KY +A +  E+ I   P+    DY  ++  GM+        
Sbjct: 234 QPKSYQGWFNRGIALQKQHKYAEAVASYEQVIQLQPQ----DYEAWFYKGMALKSQWP-- 287

Query: 149 PYDQRATKLMLQYMSRIVERYTNSP 173
                  +  L  + + ++   +SP
Sbjct: 288 -------EAALSSIDQTLQMNPDSP 305


>gi|37526324|ref|NP_929668.1| hypothetical protein plu2428 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36785755|emb|CAE14802.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 389

 Score = 35.9 bits (82), Expect = 6.1,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 66/184 (35%), Gaps = 32/184 (17%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT- 122
              ++    + +A   F Q   +  F   A +SLL       S   +++A  + E+ +  
Sbjct: 114 GRDYMSAGLYDRAENMFAQLVNEKDFQENAFQSLLTI---YQSTSDWKKAIDIAEKLVKS 170

Query: 123 -QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
            ++   + + + Y  + +   Q +     D       + Y+++ V+   N          
Sbjct: 171 GKHDLREKIAHFYCELAL---QEMSGDDLD-----EAIGYLNKAVQADKNC--------- 213

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
                   A   + +GR ++ R EY  A    + VL    D +   E +  L E Y    
Sbjct: 214 --------ARVSIMLGRLFMARQEYNKAADALKSVLE--QDKQLVSEVLPILQECYQHQN 263

Query: 242 LMDE 245
            +DE
Sbjct: 264 QIDE 267


>gi|304393435|ref|ZP_07375363.1| TPR repeat-containing protein [Ahrensia sp. R2A130]
 gi|303294442|gb|EFL88814.1| TPR repeat-containing protein [Ahrensia sp. R2A130]
          Length = 225

 Score = 35.9 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 20/124 (16%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           A      + F  A +  +Q     P +A    +++ L      +    ++++ +  E+ +
Sbjct: 112 ARAASGRKQFDAALDLLDQVIVLRPEYAEGWNQRATL-----HFQRKDFRKSIADIEKVL 166

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ-RATKLMLQYMSRIVERYTNSPYVKGARF 180
              P          L G++       V  +Q    K  LQ   R++  Y ++     A  
Sbjct: 167 ALEPRHYGA-----LSGLA-------VILEQLGNEKQALQTWYRVLSVYPSNRSAGRAVV 214

Query: 181 YVTV 184
            +  
Sbjct: 215 RLEE 218


>gi|224046569|ref|XP_002198951.1| PREDICTED: similar to sperm associated antigen 1 [Taeniopygia
           guttata]
          Length = 999

 Score = 35.9 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 12/129 (9%), Positives = 38/129 (29%), Gaps = 20/129 (15%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAG-VARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           EK        ++ +A  Y+ +     P A     K+             +  A    E+ 
Sbjct: 220 EKGNEAFASGDYVEAVTYYTRSISVIPTAAVYNNKAQAEI-----KLQDWDNALEDCEKV 274

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +   P +             ++ +        +  +  ++ +++++     +     A+ 
Sbjct: 275 LDMEPGNIK---ALMRRATVHSHL--------QNYQTAIEDLNKVLSVEPKN---TMAKK 320

Query: 181 YVTVGRNQL 189
            +     +L
Sbjct: 321 RLLELEEKL 329


>gi|209522992|ref|ZP_03271549.1| ATPase AAA-2 domain protein [Arthrospira maxima CS-328]
 gi|209496579|gb|EDZ96877.1| ATPase AAA-2 domain protein [Arthrospira maxima CS-328]
          Length = 824

 Score = 35.9 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 13/90 (14%)

Query: 184 VGRNQLAAKEVE-IG-------RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
           + +  LA  E++ IG       R Y++R    A   RFQ V+      E   E +  L  
Sbjct: 300 MLKPALARGELQCIGATTLDEYRKYIERDA--ALERRFQPVMVGEPSVEETIEILFGLRS 357

Query: 236 AYVA---LALMDEAREVVSLIQERYPQGYW 262
           AY     L + DEA    + +  RY    +
Sbjct: 358 AYEQHHRLTISDEAVLAAAKLSHRYISDRF 387


>gi|206602344|gb|EDZ38825.1| putative TPR domain-containing protein [Leptospirillum sp. Group II
           '5-way CG']
          Length = 254

 Score = 35.9 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 24/78 (30%), Gaps = 11/78 (14%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           G Y+ A     E I   P        YY +G  Y ++              L     +V 
Sbjct: 187 GDYKGALEEFSEVIRLAPRFPRS---YYELGRVYLKLENQ--------NKALLAFKEVVR 235

Query: 168 RYTNSPYVKGARFYVTVG 185
              +SP    AR Y+   
Sbjct: 236 LDPDSPESVKARQYIKKL 253


>gi|189347838|ref|YP_001944367.1| hypothetical protein Clim_2365 [Chlorobium limicola DSM 245]
 gi|189341985|gb|ACD91388.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium limicola DSM
           245]
          Length = 308

 Score = 35.9 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 22/136 (16%), Positives = 47/136 (34%), Gaps = 17/136 (12%)

Query: 35  LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94
           + G  + +  D  L    D RY    Y +    +   +F+ A + +N+         +  
Sbjct: 175 MSGDPKGAISDFSLAIERDQRYDAAWYNRGNARVATGDFNGAVQDYNK--------ALIL 226

Query: 95  KSLLMSAF---VQYSA--GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
            + L+ A+       A  G +Q A       +   P++      YY  G++  + + D+ 
Sbjct: 227 NAELVEAYNNRAYAKAALGDFQGAVDDLTRLLQVRPDNPE---AYYNRGIA-KKQLGDIS 282

Query: 150 YDQRATKLMLQYMSRI 165
                 +       R+
Sbjct: 283 GAIGDLQKAATLGDRL 298


>gi|172036794|ref|YP_001803295.1| soluble lytic transglycosylase [Cyanothece sp. ATCC 51142]
 gi|171698248|gb|ACB51229.1| probable soluble lytic transglycosylase [Cyanothece sp. ATCC 51142]
          Length = 732

 Score = 35.9 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 71/248 (28%), Gaps = 55/248 (22%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A   LKE     A        +++P   +    LL              A    +E 
Sbjct: 96  YLLANDLLKEYEGGPALRQLEGLEKEYPT--LVPYILLKRGRGYELTNDTALAQETWQEL 153

Query: 121 ITQYPESKNVDYVYYLVGM---SYAQM----IRDVPYDQRATKLMLQ------YMSRIVE 167
           I  YP+S       Y +G    SY           P  Q+  +  L+       +  ++ 
Sbjct: 154 IETYPDSLASAEALYELGKYDASYWDQGIETFPQHPSIQKVIRERLKENPKQPELLLLLA 213

Query: 168 RY-TNSPYVKGARFYVTVGR---------NQLAAKEVEIGRYYLKRGEYVAA-------- 209
           +Y    P     R  +              ++A    E+  +Y     Y  A        
Sbjct: 214 KYAPYDPNTNSIRDRLVNDYADQLTPEDWQRIADGYWEVNEFYKAAMAYQQADKSPQNYY 273

Query: 210 -IPRFQLV-----------------LANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
            I R Q V                 +  +  AE    A+ RL      L+    A   + 
Sbjct: 274 RIARGQQVQPPGDNKETVIAAYRQLMFGFPKAEETALALKRLA----QLSPPQTAITYLD 329

Query: 252 LIQERYPQ 259
            I +++P+
Sbjct: 330 EIIQKFPE 337


>gi|126667425|ref|ZP_01738397.1| hypothetical protein MELB17_14201 [Marinobacter sp. ELB17]
 gi|126628181|gb|EAZ98806.1| hypothetical protein MELB17_14201 [Marinobacter sp. ELB17]
          Length = 809

 Score = 35.9 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 28/83 (33%), Gaps = 6/83 (7%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           +A       +   A   +   S ++  +  A   L+         G  + A     +++ 
Sbjct: 143 EAKAMRLSGDVDGAVTAYRDISANYSTSVDAITGLIE---SHIQQGNARTALGAANDWLA 199

Query: 123 QYPESKNVDYVYYLVGMSYAQMI 145
            +  +     V YL G++  Q+ 
Sbjct: 200 SHETTPA---VLYLKGLAQYQLD 219


>gi|115634686|ref|XP_786841.2| PREDICTED: similar to secreted protein [Strongylocentrotus
           purpuratus]
          Length = 356

 Score = 35.9 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 57/160 (35%), Gaps = 25/160 (15%)

Query: 30  IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
           +A   +         ++   S  D     ++  +    +K++ ++KA E + Q       
Sbjct: 79  VAQSSIGACSAAPGPEI---SEADKARAEKLKNEGNELMKKEQYNKAIEVYTQAINLN-- 133

Query: 90  AGVARKSLL--MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
              ++KS+     A        +++A    ++ ++  P        Y  +G++Y+ M   
Sbjct: 134 ---SQKSVYYSNRAAAYSKVENHEKALEDCQKAVSIDPTYSK---AYGRMGLAYSSM--- 184

Query: 148 VPYDQRATKLMLQYMSRIVERYT-NSPY---VKGARFYVT 183
                   +   +  +R V+    NS Y   ++ A   + 
Sbjct: 185 -----NEFQKACEAYTRAVDLEPGNSSYRANLEIAEQKLK 219


>gi|109096287|ref|XP_001097288.1| PREDICTED: RNA polymerase II-associated protein 3 isoform 2 [Macaca
           mulatta]
          Length = 631

 Score = 35.9 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 46/143 (32%), Gaps = 21/143 (14%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D +    + EK   + K+  + +A + + +     P+  V        A   +   K+  
Sbjct: 129 DSQKALVLKEKGNKYFKQGKYDEAIDCYTKGMDADPYNPVLPT---NRASAYFRLKKFAV 185

Query: 113 AASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           A S     I       N  Y   Y   G +   + +         +   +   R++E   
Sbjct: 186 AESDCNLAIAL-----NRSYTKAYSRRGAARFALQK--------LEEAKKDYERVLELEP 232

Query: 171 NSPYVKGARFYVTVGRNQLAAKE 193
           N+     A   +      LA+KE
Sbjct: 233 NN---FEATNELRKINQALASKE 252


>gi|281209191|gb|EFA83366.1| hypothetical protein PPL_04159 [Polysphondylium pallidum PN500]
          Length = 353

 Score = 35.9 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 43/98 (43%), Gaps = 2/98 (2%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQ-REVYEKAVLFLKEQNFSKAYEYFNQ 82
           ++ + ++A+C+    +  ++ D    ++       + ++ +   +L ++++ +A E F  
Sbjct: 253 ISCYLNMALCYNKLAKYSNAIDSCNKALKLSPNDIKGLFRRGKAYLLKKDYEEAIEDFQA 312

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
                     A K+ L  A   YS    ++A++  + +
Sbjct: 313 VLNIEADNKDA-KAELARANQLYSQENKKKASAYAKFF 349


>gi|289191717|ref|YP_003457658.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22]
 gi|288938167|gb|ADC68922.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22]
          Length = 308

 Score = 35.9 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 35/109 (32%), Gaps = 7/109 (6%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           K+ L  F   A+   +G   ++                  Y  A +  K   +  A +  
Sbjct: 71  KYILANFLKGALLVSLGRLEEAKEIFLKLYRLKKSDLSVKYAIAFILKKLGEYDSALKIL 130

Query: 81  NQCSRDFPFA--GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
           ++  + +P +    A K  +      Y  GK +++    +  +   P  
Sbjct: 131 DEVLKKYPQSAIAWAEKGEI-----LYKEGKLKKSLECFDNALKINPND 174


>gi|220907053|ref|YP_002482364.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC
           7425]
 gi|219863664|gb|ACL44003.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425]
          Length = 358

 Score = 35.9 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 24/67 (35%), Gaps = 3/67 (4%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
            V+ L++   ++A     +     P +G      L  A   +S G   +  +  E  I  
Sbjct: 179 GVILLRQGQTAQAIASLKKAELLAPRSG---SVQLNLALAWFSQGNVVEGTAALERAIAL 235

Query: 124 YPESKNV 130
            P +  +
Sbjct: 236 EPRNPKI 242


>gi|168705447|ref|ZP_02737724.1| hypothetical protein GobsU_38303 [Gemmata obscuriglobus UQM 2246]
          Length = 700

 Score = 35.9 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 8/57 (14%), Positives = 14/57 (24%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           Y   ++ +K  N   A   F +     P    A  +              + A    
Sbjct: 421 YNLGLMEMKAGNRKSAVARFFEVIDRAPGTTFAEFAWCWIGRSHLEDDAPEAARRAY 477


>gi|297584408|ref|YP_003700188.1| tetratricopeptide repeat-containing protein [Bacillus
           selenitireducens MLS10]
 gi|297142865|gb|ADH99622.1| Tetratricopeptide repeat protein [Bacillus selenitireducens MLS10]
          Length = 423

 Score = 35.9 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 11/62 (17%)

Query: 197 GRYYLKRGEYVAAIPRFQLVL------ANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
           G +YL RGEY  AI  F+ V+        +           RL EAY A+   + A E  
Sbjct: 142 GEFYLNRGEYQKAIYYFRQVILQKKLPEEFPVDPEL-----RLAEAYSAIGEFENALEHY 196

Query: 251 SL 252
            L
Sbjct: 197 KL 198


>gi|154484615|ref|ZP_02027063.1| hypothetical protein EUBVEN_02331 [Eubacterium ventriosum ATCC
           27560]
 gi|149734463|gb|EDM50380.1| hypothetical protein EUBVEN_02331 [Eubacterium ventriosum ATCC
           27560]
          Length = 476

 Score = 35.9 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 24/63 (38%), Gaps = 3/63 (4%)

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
           Y  AI +F+  +    D+ +  +A+  L  +Y        A +    I + +P       
Sbjct: 385 YDTAIKQFKKCIEA--DSGNV-DAIYYLAWSYKNKGDSKNANKYFKEIYDNFPNSSHYDT 441

Query: 266 VET 268
            ++
Sbjct: 442 AKS 444


>gi|124010056|ref|ZP_01694718.1| TPR repeat [Microscilla marina ATCC 23134]
 gi|123983943|gb|EAY24338.1| TPR repeat [Microscilla marina ATCC 23134]
          Length = 175

 Score = 35.9 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 48/125 (38%), Gaps = 14/125 (11%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
           ++  +     ++   +   + ++  A + F +  +  P      K+ L  + V+Y+   Y
Sbjct: 1   MSGRKGADAYFKSGNIKAYQGDYKGAVKDFGRALKVNPMHA---KAYLGRSNVKYNLKNY 57

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           + A       I   P   ++   Y+ +G+SY ++        +  K  +  +S  + R  
Sbjct: 58  RGAIEDCNTAIQLNP---DLIDAYFNLGISYYEL--------KKYKEAVSKLSTSIRRKP 106

Query: 171 NSPYV 175
           N P  
Sbjct: 107 NDPEA 111


>gi|134045486|ref|YP_001096972.1| hypothetical protein MmarC5_0442 [Methanococcus maripaludis C5]
 gi|132663111|gb|ABO34757.1| Tetratricopeptide TPR_2 repeat protein [Methanococcus maripaludis
           C5]
          Length = 126

 Score = 35.9 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 26/64 (40%), Gaps = 3/64 (4%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           +   E Y + ++     N++++ + F +  +  P      K  LM     Y+  +Y+++ 
Sbjct: 26  QNPEEYYSEGIMQYNAGNYTESIDLFEKAIQLNPEES---KYWLMKGEALYNLERYEESV 82

Query: 115 SLGE 118
               
Sbjct: 83  DCYN 86


>gi|45655952|ref|YP_000038.1| hypothetical protein LIC10038 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45599185|gb|AAS68675.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 502

 Score = 35.9 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 76/212 (35%), Gaps = 37/212 (17%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK---SLLMSAFVQYSAGKYQQAASL 116
           +Y+  V+ ++ + +S+A    ++          A+    + L  A   +    Y++A   
Sbjct: 214 LYKYGVILIRLEKYSEALRILDKLENKI-GNDNAKMLYYANLNQAVAYHKMKHYEEA--- 269

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQM-IRDVPYDQRATKLMLQYMSRI--VERY---- 169
            + Y   Y        V  L+G++  +  ++D     +  +  L++  R   +  Y    
Sbjct: 270 AKYYRKSYTAHNT---VQPLIGLTKLKYEVKDCENAIKTAEKALEFGERTHEIRMYLALC 326

Query: 170 -TNSPYVKGARFYVTVGRNQLAAKE---------------VEIGRYYLKRGEYVAAIPRF 213
              +         +    ++L  KE               +++ RYY  RGEY  A+  F
Sbjct: 327 KIQNKEETEGYTILKEIASKL-EKENPEFKNLPDVYNDGILKLARYYTNRGEYEKALRYF 385

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
             V ++  +          L +AY     +D+
Sbjct: 386 HSVQSSEEEEREYR---FYLGKAYYYTGKIDQ 414


>gi|24212743|ref|NP_710224.1| TPR-repeat-containing protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|24193382|gb|AAN47242.1| TPR-repeat-containing protein [Leptospira interrogans serovar Lai
           str. 56601]
          Length = 502

 Score = 35.9 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 76/212 (35%), Gaps = 37/212 (17%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK---SLLMSAFVQYSAGKYQQAASL 116
           +Y+  V+ ++ + +S+A    ++          A+    + L  A   +    Y++A   
Sbjct: 214 LYKYGVILIRLEKYSEALRILDKLENKI-GNDNAKMLYYANLNQAVAYHKMKHYEEA--- 269

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQM-IRDVPYDQRATKLMLQYMSRI--VERY---- 169
            + Y   Y        V  L+G++  +  ++D     +  +  L++  R   +  Y    
Sbjct: 270 AKYYRKSYTAHNT---VQPLIGLTKLKYEVKDCENAIKTAEKALEFGERTHEIRMYLALC 326

Query: 170 -TNSPYVKGARFYVTVGRNQLAAKE---------------VEIGRYYLKRGEYVAAIPRF 213
              +         +    ++L  KE               +++ RYY  RGEY  A+  F
Sbjct: 327 KIQNKEETEGYTILKEIASKL-EKENPEFKNLPDVYNDGILKLARYYTNRGEYEKALRYF 385

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
             V ++  +          L +AY     +D+
Sbjct: 386 HSVQSSEEEEREYR---FYLGKAYYYTGKIDQ 414


>gi|332365156|gb|EGJ42919.1| hypothetical protein HMPREF9396_1597 [Streptococcus sanguinis
           SK1059]
          Length = 723

 Score = 35.9 bits (82), Expect = 6.3,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 61/196 (31%), Gaps = 26/196 (13%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAF---VQYSAGKYQQAASLGEEYITQY---PESKN 129
           A +        FP +    +S  M  F         +  +     ++    +     S++
Sbjct: 19  AVDKLQALHEQFPDSRDIAESFAMILFNLSA--EQSELNELEVTVDKLQALHEYFSNSRD 76

Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
           +   + ++ +      +    +Q      LQ +    E++ +S  +  +   +      L
Sbjct: 77  IAESFAMI-LVNLSAEQSELNEQEVAADKLQALH---EQFPDSRDIAESFAMILF-NLSL 131

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE--AMARLVEAYVALALMDEAR 247
              E+       +R    A + + Q +   + D+    E  AM     +     L +   
Sbjct: 132 KQSELN------ERE---ATVDKLQALHEKFPDSRDIAESFAMILFNLSAEKSELNELKA 182

Query: 248 EVVSL--IQERYPQGY 261
            V  L  + E +P   
Sbjct: 183 TVDKLQALHEHFPNSR 198



 Score = 35.9 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 25/204 (12%), Positives = 64/204 (31%), Gaps = 30/204 (14%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAF-VQYSAGKYQQAASLGEEYITQY---PESKNVD 131
           A +        FP +    +S  M  F +     +  +  +  ++    +   P+S+++ 
Sbjct: 101 AADKLQALHEQFPDSRDIAESFAMILFNLSLKQSELNEREATVDKLQALHEKFPDSRDIA 160

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
             +    M    +  +   +    K  +  +  + E + NS  +  +   +    N  A 
Sbjct: 161 ESF---AMILFNLSAEKS-ELNELKATVDKLQALHEHFPNSRDIAESFARI--LFNLSAE 214

Query: 192 ----KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE--AMARLVEAYVALALMDE 245
                E E+            A  + Q +   + D+    E  AM     +     + + 
Sbjct: 215 QPELNEQEV------------AADKLQALHEQFPDSRDIAESFAMILFNLSIKKTEVRES 262

Query: 246 AREVVSL--IQERYPQGYWARYVE 267
              V  +  +   +P+     ++ 
Sbjct: 263 EATVEKVQKLHGDFPKSEIIAFIY 286


>gi|302343326|ref|YP_003807855.1| hypothetical protein Deba_1896 [Desulfarculus baarsii DSM 2075]
 gi|301639939|gb|ADK85261.1| Tetratricopeptide TPR_2 repeat protein [Desulfarculus baarsii DSM
           2075]
          Length = 583

 Score = 35.9 bits (82), Expect = 6.3,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 36/122 (29%), Gaps = 17/122 (13%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              +L    + +A   F         +    +  L    V Y  GKY QA    EE+   
Sbjct: 258 GRFYLSTGRYQEALREFAVVKGL---SRDDSEVRLKIGLVYYEQGKYNQA---AEEFRAI 311

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
             +  +     Y +G+S          D       L    RI     +S     AR ++ 
Sbjct: 312 AKDEPDNHRARYYLGVSL--------QDGGKGDQALTAFERIP---PDSDMYVDARLHMA 360

Query: 184 VG 185
             
Sbjct: 361 DI 362



 Score = 35.5 bits (81), Expect = 8.9,   Method: Composition-based stats.
 Identities = 47/274 (17%), Positives = 86/274 (31%), Gaps = 76/274 (27%)

Query: 24  LTIFFSIAVCFLVGWERQSSR-DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
           L +    A C  V  +   ++ D  + S+TD      +Y  A + L+  + +KA E   Q
Sbjct: 16  LALMLLTAGCATVTPQAPPAKVDAPVSSLTDSLA---LYGAAQMALENGDTNKALELLRQ 72

Query: 83  CSRDFPFAGV---------------------ARKSL----------LMSAFVQYSAGKYQ 111
             +  P +                       AR+++          L+   +  S     
Sbjct: 73  GIKIDPKSAFLHIEVSRILLGVGRTDEAEKEARQAIELNPELVDGWLLLGGIYSSRQDLN 132

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            A    E   T  P+ +      YL G  Y         DQ   +  +Q +  +V+    
Sbjct: 133 NAVKAFERATTLDPDQEEAR--LYL-GTLYM--------DQGRMEQAVQVLRDLVKLRP- 180

Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD----AEHAE 227
                           +LA     + RYYL  G+ +A++ R++            A + E
Sbjct: 181 ----------------RLA-----LARYYL--GQALASLRRYRQAEVQLKAALLIAPNFE 217

Query: 228 EAMARLVEAYVALALMDEAR-EVVSLIQERYPQG 260
             +  L   Y       +A    + ++    P  
Sbjct: 218 AVLFELGAVYEMQHKYRDAEATYLRVLDLN-PDS 250


>gi|284050292|ref|ZP_06380502.1| TPR repeat-containing protein [Arthrospira platensis str. Paraca]
 gi|291571453|dbj|BAI93725.1| TPR domain protein [Arthrospira platensis NIES-39]
          Length = 182

 Score = 35.9 bits (82), Expect = 6.3,   Method: Composition-based stats.
 Identities = 20/142 (14%), Positives = 43/142 (30%), Gaps = 27/142 (19%)

Query: 56  YQREVYEKAVLFLKEQNFSKAY----EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
             +E Y+   ++  +  +S+A     +         P   +A        +  ++  +Y 
Sbjct: 51  TAQEYYKLGCIYNDKNLYSQAIAVLQKALKAVEEQEPPENIAM-IYNALGYAHFAKEEYD 109

Query: 112 QAASLGEEYITQYPESK----NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            A    +E +   PE      N+ Y Y                  + T   L+   + + 
Sbjct: 110 IAIRNYKEALKLTPEYATACNNLGYAYERK---------------KLTSQALEAYEKSLS 154

Query: 168 RYTNSPYVKGARFYVTVGRNQL 189
              N+     A+      R +L
Sbjct: 155 LEPNNQ---IAQRRAESLRKRL 173


>gi|253701622|ref|YP_003022811.1| hypothetical protein GM21_3024 [Geobacter sp. M21]
 gi|251776472|gb|ACT19053.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. M21]
          Length = 412

 Score = 35.9 bits (82), Expect = 6.3,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 20/58 (34%), Gaps = 3/58 (5%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           E A   +    ++KA    ++     P     R   LM     Y    Y  AAS  +E
Sbjct: 70  EIAKRDMNAGRYAKAARSLSEARELLPENRELR---LMRGVALYLDKDYATAASEFQE 124


>gi|168702412|ref|ZP_02734689.1| serine/threonine protein kinase [Gemmata obscuriglobus UQM 2246]
          Length = 669

 Score = 35.9 bits (82), Expect = 6.3,   Method: Composition-based stats.
 Identities = 13/117 (11%), Positives = 29/117 (24%), Gaps = 14/117 (11%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
                    E+Y      L      +A E   +     P            A   +  G+
Sbjct: 475 PADPTVTAWELYAVGRARLNAGALERAAELLRRAVEREPQGFWPH---FHLAVCAHRLGR 531

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP--YDQRATKLMLQYMSR 164
            ++A +     ++               G+ +            + A +  L+  +R
Sbjct: 532 AEEAVAGFSACLSL---------AQNRRGLCHYHRGLAYAAIRKEGANENALRDFNR 579


>gi|149918287|ref|ZP_01906778.1| hypothetical protein PPSIR1_36267 [Plesiocystis pacifica SIR-1]
 gi|149820813|gb|EDM80222.1| hypothetical protein PPSIR1_36267 [Plesiocystis pacifica SIR-1]
          Length = 524

 Score = 35.9 bits (82), Expect = 6.3,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 36/111 (32%), Gaps = 18/111 (16%)

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
               R      +    ++E + +SP  K     +      L             RG  +A
Sbjct: 425 SRMARDYAETARLYRSMLEHHPDSPEAKNVPVRLGDVLMTLGDH----------RGA-LA 473

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           A  R+   +        A EA    ++A  AL    EA   ++  +  YP+
Sbjct: 474 AYERYSAGV-------LAPEAQLGRIKALRALKRDTEAEAAITAFRSNYPE 517


>gi|153855188|ref|ZP_01996372.1| hypothetical protein DORLON_02386 [Dorea longicatena DSM 13814]
 gi|149752357|gb|EDM62288.1| hypothetical protein DORLON_02386 [Dorea longicatena DSM 13814]
          Length = 173

 Score = 35.9 bits (82), Expect = 6.3,   Method: Composition-based stats.
 Identities = 22/170 (12%), Positives = 61/170 (35%), Gaps = 32/170 (18%)

Query: 62  EKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           +K V +L++  + +A E F     +          +       ++    Y+ A    ++ 
Sbjct: 25  QKGVEYLEDGKYDQAIEQFEQAVDKKKNVGD----AYRGIGIAKWEKKDYKGARKAFKKA 80

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +    +++    +Y ++G    ++           K  L Y +  + +       + +  
Sbjct: 81  LEN--DAEKTGTIYNMIGNCDLKL--------GEAKEALNYYNLGLAQ-------EDSGK 123

Query: 181 YVTVGRNQLAAKEV--EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
            +         KE+   I   Y +  ++ +A  + +  L NY + + A++
Sbjct: 124 KM--------KKEMQYNIIVAYEQMEDWESAKVKLEEYLENYPNDKSAKK 165


>gi|149195041|ref|ZP_01872133.1| TPR repeat [Caminibacter mediatlanticus TB-2]
 gi|149134754|gb|EDM23238.1| TPR repeat [Caminibacter mediatlanticus TB-2]
          Length = 747

 Score = 35.9 bits (82), Expect = 6.3,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 35/112 (31%), Gaps = 28/112 (25%)

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL- 217
           L  +   V++Y  S ++      +   + ++  KE                  R + V+ 
Sbjct: 176 LNEIDNFVKKYPKSIFIPD----ILYLKLKILDKE-----------------NRSEDVIS 214

Query: 218 ------ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
                   Y+      E +  +   Y  +  + EA    + I   YP   WA
Sbjct: 215 LGKKWIKEYAFNPKLPEVLLLIGSNYSKMGFLSEASYYFNRIITDYPNTKWA 266


>gi|126722973|ref|NP_001075779.1| peptidyl-prolyl cis-trans isomerase FKBP4 [Oryctolagus cuniculus]
 gi|122768|sp|P27124|FKBP4_RABIT RecName: Full=Peptidyl-prolyl cis-trans isomerase FKBP4;
           Short=PPIase FKBP4; AltName: Full=52 kDa FK506-binding
           protein; Short=52 kDa FKBP; Short=FKBP-52; AltName:
           Full=59 kDa immunophilin; Short=p59; AltName:
           Full=FK506-binding protein 4; Short=FKBP-4; AltName:
           Full=FKBP59; AltName: Full=HSP-binding immunophilin;
           Short=HBI; AltName: Full=Immunophilin FKBP52; AltName:
           Full=Rotamase; Contains: RecName: Full=Peptidyl-prolyl
           cis-trans isomerase FKBP4, N-terminally processed
 gi|165593|gb|AAA31438.1| p59 protein [Oryctolagus cuniculus]
 gi|165595|gb|AAA31439.1| hsp90 binding protein [Oryctolagus cuniculus]
          Length = 458

 Score = 35.9 bits (82), Expect = 6.3,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 32/78 (41%), Gaps = 2/78 (2%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKAYEYF 80
             L    ++A+C L      ++ +    ++  D   ++ ++ +    L   +F  A   F
Sbjct: 317 LRLASHLNLAMCHLKLQAFSAAVESCNKALELDSNNEKGLFRRGEAHLAVNDFDLARADF 376

Query: 81  NQCSRDFPFAGVARKSLL 98
            +  + +P +  A K+ L
Sbjct: 377 QKVLQLYP-SNKAAKAQL 393


>gi|330895886|gb|EGH28171.1| type IV pilus biogenesis/stability protein PilW [Pseudomonas
           syringae pv. japonica str. M301072PT]
          Length = 253

 Score = 35.9 bits (82), Expect = 6.3,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 24/63 (38%), Gaps = 9/63 (14%)

Query: 64  AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
            +  LK  N  +A E+F +     R  P +      LL  A + Y   +Y QA    + +
Sbjct: 149 GMTSLKLGNREQAREHFTKALRLDRQLPLS------LLEMAQLSYEDKQYVQARDYYDRF 202

Query: 121 ITQ 123
              
Sbjct: 203 SQL 205


>gi|322436589|ref|YP_004218801.1| hypothetical protein AciX9_2998 [Acidobacterium sp. MP5ACTX9]
 gi|321164316|gb|ADW70021.1| hypothetical protein AciX9_2998 [Acidobacterium sp. MP5ACTX9]
          Length = 336

 Score = 35.9 bits (82), Expect = 6.3,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 36/110 (32%), Gaps = 14/110 (12%)

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGK-------YQQAASLGEEYITQYPESKNVDYVYY 135
             + +P    A ++           G         +    L  +Y  QYPES       Y
Sbjct: 210 IMKTYPGTKFAAEAAYDLLD-NKLCGDWQGLPKCPEMETKLYLKYADQYPESPRAPEAEY 268

Query: 136 ------LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
                  V ++  ++  D  + + A K        +  R+ NS Y + A+
Sbjct: 269 NAVYRQGVAVTMYKVDEDRKHAEAAAKQTQTLADEMRTRFPNSDYTRRAQ 318


>gi|315587013|gb|ADU41394.1| periplasmic protein [Helicobacter pylori 35A]
          Length = 331

 Score = 35.9 bits (82), Expect = 6.3,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 62/145 (42%), Gaps = 19/145 (13%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS----RDFPFAGVARK 95
           +++     ++   D+  Q+E++++A+ FLK++++++A E          R + +   A  
Sbjct: 189 KKTQEKAKIEFDKDLSKQKEIFQEALSFLKDKSYTEARERLLWLEANSYRLY-YVRYA-- 245

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
                  V Y   KY++A    +E      ++  +  + +    ++ ++  D  Y     
Sbjct: 246 ----LGEVAYGEKKYREAIKYYKESALLNKKASYMPVLLWHTAWAFKKIKDDQNY----- 296

Query: 156 KLMLQYMSRIVERYTNSPYVKGARF 180
               ++++ +   Y +S   K A+ 
Sbjct: 297 ---YKFLNTLQHLYPSSEQAKMAKK 318


>gi|288817575|ref|YP_003431922.1| hypothetical protein HTH_0254 [Hydrogenobacter thermophilus TK-6]
 gi|288786974|dbj|BAI68721.1| hypothetical protein HTH_0254 [Hydrogenobacter thermophilus TK-6]
 gi|308751175|gb|ADO44658.1| TPR repeat-containing protein [Hydrogenobacter thermophilus TK-6]
          Length = 159

 Score = 35.9 bits (82), Expect = 6.3,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 37/91 (40%), Gaps = 6/91 (6%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           +  +E++ +A  +    +  KA E++ Q    +P       +     +     G+Y++A 
Sbjct: 6   KDAQELFNRAYTYHMMGDIEKAIEFYKQSIEIYP----TALAYTFLGWAYSMLGEYEKAI 61

Query: 115 SLGEEYITQYP--ESKNVDYVYYLVGMSYAQ 143
            + E+ I   P   +   D   YL+ +   +
Sbjct: 62  EMCEQAIKLDPDLGNPYNDIGSYLIALGRYE 92


>gi|284054612|ref|ZP_06384822.1| ATPase AAA-2 [Arthrospira platensis str. Paraca]
          Length = 668

 Score = 35.9 bits (82), Expect = 6.3,   Method: Composition-based stats.
 Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 13/90 (14%)

Query: 184 VGRNQLAAKEVE-IG-------RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
           + +  LA  E++ IG       R Y++R    A   RFQ V+      E   E +  L  
Sbjct: 144 MLKPALARGELQCIGATTLDEYRKYIERDA--ALERRFQPVMVGEPSVEETIEILFGLRS 201

Query: 236 AYVA---LALMDEAREVVSLIQERYPQGYW 262
           AY     L + DEA    + +  RY    +
Sbjct: 202 AYEQHHRLTISDEAVLAAAKLSHRYISDRF 231


>gi|158313584|ref|YP_001506092.1| tetratricopeptide domain-containing protein [Frankia sp. EAN1pec]
 gi|158108989|gb|ABW11186.1| Tetratricopeptide domain protein [Frankia sp. EAN1pec]
          Length = 162

 Score = 35.9 bits (82), Expect = 6.3,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 31/80 (38%), Gaps = 6/80 (7%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y + +  L   + + A +         P +   R++       Q+ AG+Y  A       
Sbjct: 48  YTRGMALLGHGDANAAVQLLAHAVAAEPASPSVREA---LGRAQFEAGQYDDALRTFAWI 104

Query: 121 ITQYPESKNVDYVYYLVGMS 140
           + ++P     DY  + +GM+
Sbjct: 105 VDRHPTD---DYAQFGLGMA 121


>gi|157872688|ref|XP_001684878.1| TPR domain protein, conserved [Leishmania major]
 gi|68127948|emb|CAJ06608.1| putative small glutamine-rich tetratricopeptide repeat protein
           [Leishmania major strain Friedlin]
          Length = 408

 Score = 35.9 bits (82), Expect = 6.3,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 39/126 (30%), Gaps = 18/126 (14%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYS 106
           ++  +     ++  K    + +  + +A  Y+ +     P      A ++          
Sbjct: 123 NNPYEGLTAEQIKNKGNELMSQAKYKEAIAYYTKAIELQPDNAVFFANRAA-----AHTH 177

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
              Y  A    E  I   PE        Y    SY+++   + Y Q      +   ++  
Sbjct: 178 LKDYNNAIIDCERAIIINPE--------YSK--SYSRLGTALFY-QENYSRAVDAFTKAC 226

Query: 167 ERYTNS 172
           E   ++
Sbjct: 227 ELDPDN 232


>gi|30023193|ref|NP_834824.1| TPR repeat-containing protein [Bacillus cereus ATCC 14579]
 gi|29898753|gb|AAP12025.1| TPR-repeat-containing protein [Bacillus cereus ATCC 14579]
          Length = 503

 Score = 35.9 bits (82), Expect = 6.3,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 76/224 (33%), Gaps = 53/224 (23%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           E+A  +++     +A       ++D+P  ++G         A   + +G   +A  L E 
Sbjct: 155 EEANRYIRNGQLEEAIATLEIVTKDYPEFWSGHN-----NLAIAHFQSGNVDKALKLTEM 209

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS------- 172
            + + P +        +  +    +     Y     K +     ++V  Y  S       
Sbjct: 210 ILEKNPGN--------IHALCNTLIFL---YSIGEHKQVEALAGQLVSVYPISFEHRLKL 258

Query: 173 -------PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA--------AIPRFQLVL 217
                   Y + A  +  + + Q    E ++  YY     Y A        A   +Q V+
Sbjct: 259 GTTLATIGYFEHAYKWFKLLKRQ--GYEGDVSFYYWF--AYSAYMVKDQQLAEKMWQYVV 314

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVV-SLIQERYPQG 260
             + D +          E + AL L DE + V+   +++ + Q 
Sbjct: 315 ELHPDKKG--------KEPWNALNLADEGQNVLFEELRKSFQQS 350


>gi|118581739|ref|YP_902989.1| radical SAM domain-containing protein [Pelobacter propionicus DSM
           2379]
 gi|118504449|gb|ABL00932.1| Radical SAM domain protein [Pelobacter propionicus DSM 2379]
          Length = 555

 Score = 35.9 bits (82), Expect = 6.3,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 17/52 (32%), Gaps = 16/52 (30%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           K  N+S A +YF   +  +P            AF  Y   K        E +
Sbjct: 483 KSGNYSTAIKYFENVTNKYPGH----------AFGHYYLSK------SLERF 518


>gi|332292416|ref|YP_004431025.1| histidine kinase [Krokinobacter diaphorus 4H-3-7-5]
 gi|332170502|gb|AEE19757.1| histidine kinase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 740

 Score = 35.9 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 95/252 (37%), Gaps = 33/252 (13%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           L +F + +F S  V  +          +  D +        + ++AV+ + ++N+++A +
Sbjct: 5   LVRFLIALFLSYPVISIAQERENIEETLTNDKI------DSLLKRAVIAVSDRNYNQAID 58

Query: 79  YFNQCSRDFPFAGVARKSLLM---SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
                       G  ++  L     A + +    Y++A    E  I    E+K++D    
Sbjct: 59  ILKYSRDLATGIGHTKRIGLASGTLAKLYFQLNDYEKALVENERAIALQKETKSLD---- 114

Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR-NQL--AAK 192
           L+G SY    + +   ++ T   L Y++  +    NS      +  +   + + L  +  
Sbjct: 115 LLGQSYITATQ-LALIKKDTTTALTYIANGIVTLENS-NRDDLKAQLHTLKGDILRDSES 172

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV-- 250
            ++    Y K  EY       +   ++Y       +A+     +   L  ++EA E +  
Sbjct: 173 HLDAISSYNKSIEY------AKNEKSDYLKT----QALTNKALSLAQLRRLEEADETLLE 222

Query: 251 --SLI-QERYPQ 259
             SL+    YP 
Sbjct: 223 VESLLSSNNYPS 234


>gi|326438090|gb|EGD83660.1| hypothetical protein PTSG_12145 [Salpingoeca sp. ATCC 50818]
          Length = 825

 Score = 35.9 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 28/239 (11%), Positives = 70/239 (29%), Gaps = 49/239 (20%)

Query: 50  SVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQ--------CSRDFP-----FAGVARK 95
                R    +Y    + +  +  + KA  ++ +             P     +      
Sbjct: 310 EGEKGRNVAALYNNLGIAYKNKGEYDKAIYFYEKDLAITVETVGEKHPSTANTYG----- 364

Query: 96  SLLMSAFVQYSAGKYQQAASLGEE----YI-TQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
                    YS G+Y +A +  E+    ++ T   +  +    +  +G++Y     D   
Sbjct: 365 ---NLGLAYYSKGEYDKAIAYHEKALAVFVETLGEKHPSTASTFNNLGLAYGSK-GDYDR 420

Query: 151 DQRATKLMLQYM-SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
                +  L      + E++ ++         +          +  I  +Y K    +A 
Sbjct: 421 AIAFYEKDLAITVETLGEKHPST---ARTYNNLGEAYRHKGEYDRAIA-FYEKD---LAV 473

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA----REVVSL----IQERYPQG 260
               + +   +    +       L  AY      D A     + +++    + E++P  
Sbjct: 474 T--VETLGEKHPSTANTY---NNLGNAYDNKGEYDRAIAFYEKALAIRVEALGEKHPST 527


>gi|309791248|ref|ZP_07685779.1| TPR repeat-containing protein [Oscillochloris trichoides DG6]
 gi|308226674|gb|EFO80371.1| TPR repeat-containing protein [Oscillochloris trichoides DG6]
          Length = 1126

 Score = 35.9 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 62/207 (29%), Gaps = 36/207 (17%)

Query: 64   AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              + + E  +  A  YF   +   P            A     +G   +A +  ++ +  
Sbjct: 880  GRVAVGEGQWGVALGYFETATNL-PGGTQDANVQFWLAEGLLRSGALDRAMNAYQQALAI 938

Query: 124  YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
             P          L+G++       + Y Q      LQ + + + +  +  Y +   F   
Sbjct: 939  RPTFPEA-----LLGLA------QLQYAQGDPATALQTVEQSIGQRGD--YAEALLFKGK 985

Query: 184  VGRN------QLAAKEVEI------GRYYLKR-------GEYVAAIPRFQLVLANYSDAE 224
            + +        L A +  I         Y +R         Y  AI   +  +    +  
Sbjct: 986  LLQEYGRIDQALVAYDASIRASSQIAETYYRRSLLLISTERYDKAINDLRRAVTLQPN-- 1043

Query: 225  HAEEAMARLVEAYVALALMDEAREVVS 251
               EA   +  AY A    D+A +   
Sbjct: 1044 -FPEAHYWMGRAYYARNQDDQAHDAFK 1069


>gi|307592015|ref|YP_003899606.1| Tetratricopeptide repeat-containing protein [Cyanothece sp. PCC
           7822]
 gi|306985660|gb|ADN17540.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7822]
          Length = 655

 Score = 35.9 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 48/152 (31%), Gaps = 24/152 (15%)

Query: 60  VYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           +Y     + L   +++KA               +  ++      +     KY+ A S  +
Sbjct: 443 LYSDLQKYKLALSDYNKAIAL----------NPLLEQAYYNRGVLYSQLKKYELALSDYD 492

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           + I   PE      VYY  G +  + +++           +++ S   + Y N       
Sbjct: 493 KAIQLNPEDTQ---VYYNRG-NLYKTLKEYDKALFDYNKAIEFNSEDAQAYNN---RAVV 545

Query: 179 RFYVTVGRNQLAAKEVEI------GRYYLKRG 204
              +   +  L+     I       R Y  RG
Sbjct: 546 YKELKEYKKALSDYNKAIEINPDDARTYYNRG 577


>gi|300118350|ref|ZP_07056097.1| TPR domain protein [Bacillus cereus SJ1]
 gi|298724319|gb|EFI65014.1| TPR domain protein [Bacillus cereus SJ1]
          Length = 304

 Score = 35.9 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 57/151 (37%), Gaps = 36/151 (23%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
             +++K++ + +A E F +     P    + ++    A   Y+ G+ ++A    E ++  
Sbjct: 75  GDIYMKQKKWEEAKEAFQKSISIQP----SDEAYHNVAVAHYNLGELEEA---SEFFLRV 127

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
              + + DY+ Y    SY + + D+       K  L   +R       S           
Sbjct: 128 ---AGDSDYIMY----SYVKCLIDLGR-TTEAKEKLDAFNR------KSD---------- 163

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
              N L   E+ +   Y++   Y  AI  F+
Sbjct: 164 ---NFLG--EMMVADLYVELNCYKEAIEWFE 189


>gi|260221253|emb|CBA29632.1| hypothetical protein Csp_A13120 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 215

 Score = 35.9 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 24/65 (36%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
                  +YE+    +   + + A   +    + FP     +++ L  A V Y +GK   
Sbjct: 51  QAEQASAMYEEVDRVIAGGDVAAADRAYGDMRQRFPSTVYTQQAGLTLAKVAYLSGKPDV 110

Query: 113 AASLG 117
           A +  
Sbjct: 111 AQTAL 115


>gi|222034670|emb|CAP77412.1| hypothetical protein LF82_469 [Escherichia coli LF82]
          Length = 388

 Score = 35.9 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 30/76 (39%), Gaps = 3/76 (3%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
            +   +  ++  A++ ++ +N++ A E F         +     +    A     + KY 
Sbjct: 270 AEPLLEPAIFISALVNMELKNYTLAVEQFAFIVGI---SPHFTTAKYNLAKSLRMSKKYD 326

Query: 112 QAASLGEEYITQYPES 127
           QA     EYI+  P S
Sbjct: 327 QAIQHFYEYISLMPSS 342


>gi|194902792|ref|XP_001980762.1| GG17081 [Drosophila erecta]
 gi|190652465|gb|EDV49720.1| GG17081 [Drosophila erecta]
          Length = 520

 Score = 35.9 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 46/163 (28%), Gaps = 31/163 (19%)

Query: 36  VGWERQSSRDVYLD------SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
            G E   S++   D      +  D     +   +    LK + FSKA + + +     P 
Sbjct: 22  SGVEITGSKEPEEDTNARTKAERDFAAAEQYKNQGNEMLKTKEFSKAIDMYTKAIELHPS 81

Query: 90  AG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMI 145
           +    A +SL            +  A   G   +   P      Y+  YY    ++  + 
Sbjct: 82  SAIYYANRSL-----AHLRQESFGFALQDGVSAVKADP-----AYLKGYYRRAAAHMSL- 130

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
                     K  L     + +   N      A+   +     
Sbjct: 131 -------GKFKQALCDFEFVAKCRPNDK---DAKLKFSECNKI 163


>gi|218782339|ref|YP_002433657.1| hypothetical protein Dalk_4510 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218763723|gb|ACL06189.1| Tetratricopeptide domain protein [Desulfatibacillum alkenivorans
           AK-01]
          Length = 1112

 Score = 35.9 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 25/70 (35%), Gaps = 4/70 (5%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
           N   A +YF    R   F+  A K+               +A  L E+ I   P + +  
Sbjct: 270 NNKLAAKYFLAAKR---FSPKAIKAKRNEVLSYLLLDNPGEALRLVEKVIELDPLNPD-G 325

Query: 132 YVYYLVGMSY 141
           Y   +  MS+
Sbjct: 326 YALKIAAMSF 335


>gi|154491945|ref|ZP_02031571.1| hypothetical protein PARMER_01575 [Parabacteroides merdae ATCC
           43184]
 gi|154088186|gb|EDN87231.1| hypothetical protein PARMER_01575 [Parabacteroides merdae ATCC
           43184]
          Length = 1102

 Score = 35.9 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 4/71 (5%)

Query: 183 TVGRNQL-AAKEVEIGRYYLKRGEYVAA---IPRFQLVLANYSDAEHAEEAMARLVEAYV 238
            + R+ + A   +EIG++Y+++G++  A   + R Q  L++        EA+  L   Y 
Sbjct: 504 ALLRDSMDARVNIEIGKHYIRQGKWEKAEQHLLRAQARLSHDYTTVKNTEALYYLGYLYQ 563

Query: 239 ALALMDEAREV 249
               + +A + 
Sbjct: 564 MTGKISKATDA 574


>gi|91203591|emb|CAJ71244.1| hypothetical protein kustc0499 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 943

 Score = 35.9 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 31/223 (13%), Positives = 65/223 (29%), Gaps = 44/223 (19%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV----ARKSLLM-SAFVQYSAGKYQQAASL 116
               L+L + N  +A E F        +       A  + L     +    G+ ++A   
Sbjct: 659 NLGFLYLNKGNTDRALEEF--------YQAYLIRPATVTYLERLTNIYLQKGEMEKALYF 710

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP-YV 175
            E+ +   P               Y   +  +   +      ++   + +E   N   Y+
Sbjct: 711 AEKAVEINPAEP-----------VYYNNLGAIFLKKGMPDKAIESFKKALELSQNGQVYL 759

Query: 176 KGAR---------FYVTVGRNQLAAKEVEIGRYYL-------KRGEYVAAIPRFQLVLAN 219
           +              +     +L  +   +  YY        K+ +Y  A+   Q  ++ 
Sbjct: 760 ENLTNACLSAGKYEELLDCYKKLIERNPSVADYYNNVGVIYKKKQQYDEAVRYSQKAVSL 819

Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
             +          L   YV L   D A  ++      YP+  +
Sbjct: 820 APENPIYT---HNLAGEYVDLQQHDRAETLLREFNMAYPEHGY 859


>gi|77919353|ref|YP_357168.1| Flp pilus assembly protein TadD [Pelobacter carbinolicus DSM 2380]
 gi|77545436|gb|ABA88998.1| Flp pilus assembly protein TadD [Pelobacter carbinolicus DSM 2380]
          Length = 321

 Score = 35.9 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 26/67 (38%), Gaps = 3/67 (4%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
             +F K  N ++A E FN      P   VA   L   A      G Y  A +L E     
Sbjct: 107 GQVFFKRGNTARAREIFNTVLEKDPQNMVAMLGLARLARS---RGDYATAETLLERLYAL 163

Query: 124 YPESKNV 130
           +PE+  +
Sbjct: 164 HPENPLI 170


>gi|88792532|gb|ABD52285.1| polysaccharide deacetylase [Xanthomonas campestris pv. glycines]
          Length = 877

 Score = 35.9 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 4/71 (5%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           E+ +   KE+ +  A E F++  +  P    A  +     FV Y  G++ ++A   E  +
Sbjct: 786 ERGLQLYKEKRYVDAAEQFDEALKLRP--DFA-LAANNLGFVYYRQGRFAESARWLENTL 842

Query: 122 TQYPESKNVDY 132
              P S+ V Y
Sbjct: 843 KIDP-SRAVAY 852


>gi|238790398|ref|ZP_04634169.1| hypothetical protein yfred0001_2660 [Yersinia frederiksenii ATCC
           33641]
 gi|238721505|gb|EEQ13174.1| hypothetical protein yfred0001_2660 [Yersinia frederiksenii ATCC
           33641]
          Length = 389

 Score = 35.9 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 62/184 (33%), Gaps = 34/184 (18%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              ++    + +A + FNQ   +  F  +     L+  +   +   +  A  + E+ +  
Sbjct: 114 GRDYMAAGLYDRAEDMFNQLVEEQDF-RLGALQQLLIIY--QATSDWNNAIEVAEKLVKM 170

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR---F 180
             +++ ++  ++                    +L LQ M         S  +  A     
Sbjct: 171 GKDNQRLEIAHF------------------YCELALQAM--------GSDDLDKAMGLLK 204

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
                  Q A   +  GR YL +GEY   +   + VL    D E   EA+  L E Y  L
Sbjct: 205 KAASADKQCARVSIMQGRLYLAKGEYAKGVEALERVLE--QDKEIVSEALPMLSECYQHL 262

Query: 241 ALMD 244
              +
Sbjct: 263 QQPE 266


>gi|167036838|ref|YP_001664416.1| helix-turn-helix domain-containing protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|320115259|ref|YP_004185418.1| helix-turn-helix domain-containing protein [Thermoanaerobacter
           brockii subsp. finnii Ako-1]
 gi|166855672|gb|ABY94080.1| helix-turn-helix domain protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|319928350|gb|ADV79035.1| helix-turn-helix domain protein [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
          Length = 428

 Score = 35.9 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 68/203 (33%), Gaps = 41/203 (20%)

Query: 73  FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
           F KA EY ++ +       +  K++  SA      G+   A    ++Y++     K  D+
Sbjct: 182 FDKAIEYADEINAI----DIKNKAIYNSALCYRCIGQPIIAIDYIDKYLST--GDKEKDF 235

Query: 133 VYYLVGMSYAQMIR-DVPYDQRATKLMLQYMSRIV------------------------- 166
           V+Y+    YA  I+ +   D    +  L+   R+V                         
Sbjct: 236 VHYI----YANSIKANCYRDMGNYEKALEIFKRLVGEIVDEEHHLLGYLYTNIGEIYMEK 291

Query: 167 ERYTNS-PYVKGARF-YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA-NYSDA 223
             +  S  Y   A         N L    +E    Y+K   Y  A    +  L  +Y ++
Sbjct: 292 NNFKESLEYFNKAERIRRKKDENLLGHTLIEKANLYIKMKLYDEARSLLEEGLEISYRNS 351

Query: 224 --EHAEEAMARLVEAYVALALMD 244
             E+  +    L+E Y  L    
Sbjct: 352 DIEYVVKGSYLLIEVYKQLGSKQ 374


>gi|193216288|ref|YP_001997487.1| TPR repeat-containing protein [Chloroherpeton thalassium ATCC
           35110]
 gi|193089765|gb|ACF15040.1| TPR repeat-containing protein [Chloroherpeton thalassium ATCC
           35110]
          Length = 242

 Score = 35.9 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 11/76 (14%), Positives = 23/76 (30%), Gaps = 5/76 (6%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQCSRD-FPFAGVARKSLLMSAFVQYSAGKYQQAA 114
               V+ +         + KA E +N      +    +            Y   K  QA 
Sbjct: 14  SPDLVFREGNRLYSRGQYQKALESYNNLLDLGYESGAL----YYNMGNAYYKLHKTGQAV 69

Query: 115 SLGEEYITQYPESKNV 130
              E+ +   P+ +++
Sbjct: 70  LYYEKALKLMPDDEDL 85


>gi|196013888|ref|XP_002116804.1| hypothetical protein TRIADDRAFT_60813 [Trichoplax adhaerens]
 gi|190580522|gb|EDV20604.1| hypothetical protein TRIADDRAFT_60813 [Trichoplax adhaerens]
          Length = 558

 Score = 35.9 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 70/207 (33%), Gaps = 32/207 (15%)

Query: 66  LFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
            FL +++++ A                  +  L  A+  +  G Y++A    EEY     
Sbjct: 35  DFLNKRDYTGAMTLLEFDRG---GGKGNDEVSLWIAYCAFHLGDYKKA---MEEYQKL-- 86

Query: 126 ESK---NVDY------VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            SK   N DY       Y+L+GM Y +         ++          + +++ +     
Sbjct: 87  TSKVGCNPDYWCYLACCYFLLGM-YKESDAAADKGPKSKLQNRLQFH-LSQKFND----- 139

Query: 177 GARFYVTVGRNQLA---AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
                +     QL      ++ +   +  R  Y  AI  ++ +L    D          +
Sbjct: 140 --EKRLMHYHQQLQDVIQDQLSLASIHYLRSHYQEAIDIYKRILLENRDYLALN---VYV 194

Query: 234 VEAYVALALMDEAREVVSLIQERYPQG 260
              Y  L   D ++EV+++  +  P  
Sbjct: 195 ALCYYKLDYYDVSQEVLAVYLQNNPDS 221


>gi|206970453|ref|ZP_03231406.1| TPR domain protein [Bacillus cereus AH1134]
 gi|218236088|ref|YP_002369934.1| TPR domain protein [Bacillus cereus B4264]
 gi|206735030|gb|EDZ52199.1| TPR domain protein [Bacillus cereus AH1134]
 gi|218164045|gb|ACK64037.1| tetratricopeptide repeat protein [Bacillus cereus B4264]
          Length = 503

 Score = 35.9 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 76/224 (33%), Gaps = 53/224 (23%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           E+A  +++     +A       ++D+P  ++G         A   + +G   +A  L E 
Sbjct: 155 EEANRYIRNGQLEEAIATLEIVTKDYPEFWSGHN-----NLAIAHFQSGNVDKALKLTEM 209

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS------- 172
            + + P +        +  +    +     Y     K +     ++V  Y  S       
Sbjct: 210 ILEKNPGN--------IHALCNTLIFL---YSIGEHKQVEALAGQLVSVYPISFEHRLKL 258

Query: 173 -------PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA--------AIPRFQLVL 217
                   Y + A  +  + + Q    E ++  YY     Y A        A   +Q V+
Sbjct: 259 GTTLATIGYFEHAYKWFKLLKRQ--GYEGDVSFYYWF--AYSAYMVKDQQLAEKMWQYVV 314

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVV-SLIQERYPQG 260
             + D +          E + AL L DE + V+   +++ + Q 
Sbjct: 315 ELHPDKKG--------KEPWNALNLADEGQNVLFEELRKSFQQS 350


>gi|145504450|ref|XP_001438197.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124405358|emb|CAK70800.1| unnamed protein product [Paramecium tetraurelia]
          Length = 728

 Score = 35.9 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 17/84 (20%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           +++++A E     +++ P A   R  LL         G+Y+QA    +  I   P + ++
Sbjct: 150 KDYNQAIE----INQNNPNAYFNRGVLLKEI------GEYEQALQDYDRAIELNPTNASI 199

Query: 131 DYVYYL-VG--MSYAQMIRDVPYD 151
               YL  G  +S          D
Sbjct: 200 ----YLNRGALLSSMNQKERALKD 219


>gi|325093353|gb|EGC46663.1| transcriptional corepressor Ssn6 [Ajellomyces capsulatus H88]
          Length = 879

 Score = 35.9 bits (82), Expect = 6.5,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 9/91 (9%)

Query: 38  WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVAR 94
           W    +         D    +  Y     ++ +  + KAYE + Q        P      
Sbjct: 210 WHNIQTTTEIQSESGDNSDAQSWYLLGRCYMSQAKYPKAYEAYQQAVYRDGRNP-TFWC- 267

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
                   + Y   +Y+ A       I   P
Sbjct: 268 ----SIGVLYYQINQYRDALDAYSRAIRLNP 294


>gi|322695628|gb|EFY87433.1| transcriptional corepressor Cyc8 [Metarhizium acridum CQMa 102]
          Length = 855

 Score = 35.9 bits (82), Expect = 6.5,   Method: Composition-based stats.
 Identities = 21/145 (14%), Positives = 47/145 (32%), Gaps = 36/145 (24%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL----------MSA 101
            D +  +  Y     ++ +Q + KAYE +             ++++              
Sbjct: 290 ADNQDAQSWYLLGRCYMAQQKYPKAYEAY-------------QQAVYRDGKNPTFWCSIG 336

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
            + Y   +Y+ A       I   P    +  V+Y +G +  +   +   D       L  
Sbjct: 337 VLYYQINQYRDALDAYSRAIRLNP---YISEVWYDLG-TLYESCNNQIAD------ALDA 386

Query: 162 MSRIVERYTNSPYVKGARFYVTVGR 186
             R  E    +P++   +  + + R
Sbjct: 387 YQRAAELDPGNPHI---KARLQLLR 408


>gi|282896460|ref|ZP_06304480.1| TPR repeat protein [Raphidiopsis brookii D9]
 gi|281198566|gb|EFA73447.1| TPR repeat protein [Raphidiopsis brookii D9]
          Length = 274

 Score = 35.9 bits (82), Expect = 6.5,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 64/207 (30%), Gaps = 46/207 (22%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAAS 115
            E+  +A     + +F+ A +Y+ +    FP      + +        + S  K + A +
Sbjct: 45  DELATQAFAATDKGDFATAEKYWTEIIERFPTNAGAWSNR-----GNSRVSQNKLEAALT 99

Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
              + I   P   +  Y      ++    +  +       +  +   + ++E        
Sbjct: 100 DYNQAIKLAPNVTD-PY------LNRGTALEGLGK----WQEAIADYNHVLELDPQ---- 144

Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE----AMA 231
                      + +A         Y  RG     + ++Q  +A+Y  A         A A
Sbjct: 145 -----------DAMA---------YNNRGNAKTGLGKWQEAIADYQKATQIAPNFAFARA 184

Query: 232 RLVEAYVALALMDEAREVVSLIQERYP 258
               A   +    +A   +  I  +YP
Sbjct: 185 NYALAMYEIGEKQQAEREMRNIVRKYP 211


>gi|187778489|ref|ZP_02994962.1| hypothetical protein CLOSPO_02084 [Clostridium sporogenes ATCC
           15579]
 gi|187772114|gb|EDU35916.1| hypothetical protein CLOSPO_02084 [Clostridium sporogenes ATCC
           15579]
          Length = 324

 Score = 35.9 bits (82), Expect = 6.5,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 22/42 (52%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
           D  +    D+++ ++VY +AV  L+ + + +A E  +    +
Sbjct: 70  DKKIKEAEDLKHSQKVYNEAVNLLENKKYEEALEKLSSIDEN 111


>gi|119191157|ref|XP_001246185.1| hypothetical protein CIMG_05626 [Coccidioides immitis RS]
          Length = 632

 Score = 35.9 bits (82), Expect = 6.5,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 45/135 (33%), Gaps = 20/135 (14%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGV 92
           +G    ++ +  L    +       Y +A L       ++A + + +     RDF ++  
Sbjct: 392 MGNREAAADNFDLALQQNKDDPDIYYHRAQLHFILGELAEAAKDYQKSIDLDRDFIYSH- 450

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
                +     QY  G    A +     +  +   ++V  VY            ++  DQ
Sbjct: 451 -----IQLGVAQYKMGSVASAMATFRRTLKNF---EDVADVY--------NYYGELLLDQ 494

Query: 153 RATKLMLQYMSRIVE 167
           +     ++   R VE
Sbjct: 495 QKFSEAIEKFDRAVE 509


>gi|50303983|ref|XP_451941.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49641073|emb|CAH02334.1| KLLA0B09262p [Kluyveromyces lactis]
          Length = 941

 Score = 35.9 bits (82), Expect = 6.5,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 38/128 (29%), Gaps = 19/128 (14%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGK 109
           D       Y    + +   +++ AY+ F Q        P              + Y   +
Sbjct: 354 DSTDATSWYHLGRIHMIRNDYTSAYDAFQQAVNRDSRNP-TFWC-----SIGVLYYQIAQ 407

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           Y+ A       I   P    +  V+Y +G +  +   +   D       L    +     
Sbjct: 408 YRDALDAYTRAIRLNP---YISEVWYDLG-TLYETCNNQVND------ALDAYKQAARLD 457

Query: 170 TNSPYVKG 177
            N+ +++ 
Sbjct: 458 PNNVHIRE 465


>gi|317180857|dbj|BAJ58643.1| hypothetical protein HPF32_1061 [Helicobacter pylori F32]
          Length = 331

 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 60/145 (41%), Gaps = 19/145 (13%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS----RDFPFAGVARK 95
           +++     ++   D+  Q+E++++A+ F K +++++A E          R + +   A  
Sbjct: 189 KKTQEKAKVEFDKDLSKQKEIFQEALSFFKNKSYAEARERLLWLEANSYRLY-YVRYA-- 245

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
                  V Y   KY++A    +E      ++  +  + +    S+ ++  D  Y     
Sbjct: 246 ----LGEVAYGEKKYREAIKYYKESALLNKKASYMPVLLWHTAWSFKKIKDDQNY----- 296

Query: 156 KLMLQYMSRIVERYTNSPYVKGARF 180
               ++++ +   Y +S   K A+ 
Sbjct: 297 ---YKFLNTLQHLYPSSEQAKMAKK 318


>gi|307198208|gb|EFN79223.1| DnaJ-like protein subfamily C member 7 [Harpegnathos saltator]
          Length = 499

 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 25/177 (14%), Positives = 49/177 (27%), Gaps = 19/177 (10%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
                       D+ Y ++ +E A      +++ K     ++C      +       L  
Sbjct: 132 DPDNKAITGEQKDLAYVKKYFEDANTAYNAKDYRKVIYCMDRCCDV---STSCTHFKLTK 188

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           A      G+YQ+A  +  +  T +   KN     Y+ GM                     
Sbjct: 189 AECLAFLGRYQEAQEIAND--TLH-IDKNNADAIYIRGMCLYFQDD--------VDKAFV 237

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
           +  +++    +              R     KE     +  K  +Y  A   +   L
Sbjct: 238 HFQQVLRLAPDHDKALEIYKRARCLRK---KKEEGNAAF--KMRQYQEAYNIYNEAL 289


>gi|301165409|emb|CBW24980.1| tetratricopeptide repeat family protein [Bacteriovorax marinus SJ]
          Length = 1060

 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 56/163 (34%), Gaps = 30/163 (18%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+ +KA   +KE+ +     + N        +     + L+   +Q   G Y+ A     
Sbjct: 606 ELMKKAKNAVKERKWE--IAFINAIKASDLDSSYIP-AQLLLGNIQVKRGYYEDAIKTFN 662

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
               +YP +K ++   YLV  +Y +  +               +  + +   +  Y+  +
Sbjct: 663 RMKKEYPLNKKIN--IYLV-EAYIKAFK--------LSKAEVELRTLAQSKLSDSYIFYS 711

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
                              +YYL+R  Y  AI +F+  +    
Sbjct: 712 LQ----------------AKYYLRREFYENAISKFKESIKRNP 738


>gi|301160155|emb|CBW19675.1| putative polysaccharide biosynthesis protein subunit C [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           SL1344]
 gi|323131976|gb|ADX19406.1| cellulose synthase subunit BcsC [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
          Length = 1180

 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     E  +++A E   +     P +        
Sbjct: 466 SLSASQRRSIDDIELSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 522

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156
             +   + AG++ QA +       Q P      Y Y  YL G            D    +
Sbjct: 523 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 569

Query: 157 LMLQYMSRIVERYTNSPY 174
             L +++ +      S +
Sbjct: 570 AALAHLNTL----PTSQW 583


>gi|229018956|ref|ZP_04175798.1| tetratricopeptide (TPR) repeat containing protein [Bacillus cereus
           AH1273]
 gi|229025199|ref|ZP_04181623.1| tetratricopeptide (TPR) repeat containing protein [Bacillus cereus
           AH1272]
 gi|228736132|gb|EEL86703.1| tetratricopeptide (TPR) repeat containing protein [Bacillus cereus
           AH1272]
 gi|228742284|gb|EEL92442.1| tetratricopeptide (TPR) repeat containing protein [Bacillus cereus
           AH1273]
          Length = 931

 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%), Gaps = 5/57 (8%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           + +   +   Q+F  A   + + S +  FA  A+K     A   +   +   A ++ 
Sbjct: 53  FAQGEFYYHHQDFEAAIFKWEKVSNE--FAPWAQK---NIADAYFELNQLSVAENVY 104


>gi|213970396|ref|ZP_03398525.1| TPR domain protein [Pseudomonas syringae pv. tomato T1]
 gi|213924867|gb|EEB58433.1| TPR domain protein [Pseudomonas syringae pv. tomato T1]
          Length = 389

 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 18/186 (9%), Positives = 59/186 (31%), Gaps = 39/186 (20%)

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           ++ L  A +    G  + A +  +   +  P +           +++ +++      +  
Sbjct: 214 QNQLQLARLYLQTGDLEPAVAALQRATSLDPGNIEA-------ALAHIELLDR----KGQ 262

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ---------LA------------AKE 193
            +      + ++ER   S  ++ A        N          LA              +
Sbjct: 263 AEQARSLFAGLLERNPGSSILQHALGM--WLLNHGQAEFALLSLAKATELAPDNNDYRYD 320

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           + +        E  AA  +   ++    +     +A   L++ +     +   + +++ +
Sbjct: 321 LAVAL--HSLNELEAAQKQLTQIV---QNQPANRKARVLLIQYWKETGQLQNVQILLAEL 375

Query: 254 QERYPQ 259
           +++ P 
Sbjct: 376 EQQNPD 381


>gi|186686063|ref|YP_001869259.1| tetratricopeptide TPR_4 [Nostoc punctiforme PCC 73102]
 gi|186468515|gb|ACC84316.1| Tetratricopeptide TPR_4 [Nostoc punctiforme PCC 73102]
          Length = 381

 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 47/142 (33%), Gaps = 19/142 (13%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKY 110
           D       +  A+   ++    +A   + Q  +  P         + L++       G+ 
Sbjct: 204 DSSNANAYFNLAIALQQQGQTEQAIATYRQALQLDPQNATAYNNMANLLAI-----QGQA 258

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
            +A S+  + I   P++ +    YY +G++           Q   K     + R    Y 
Sbjct: 259 SEAISVYRQAIRLNPKNAS---AYYNLGVTLYN--------QGDIKKANGVLKRAHTEYR 307

Query: 171 NSPYVKGARFYVTVGRNQLAAK 192
               ++ A   +     Q+A K
Sbjct: 308 EQGNIEQA-EKIEQLMQQIAQK 328


>gi|219847532|ref|YP_002461965.1| transcriptional activator domain-containing protein [Chloroflexus
            aggregans DSM 9485]
 gi|219541791|gb|ACL23529.1| transcriptional activator domain protein [Chloroflexus aggregans DSM
            9485]
          Length = 1163

 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 40/112 (35%), Gaps = 19/112 (16%)

Query: 148  VPYDQRATK-----LMLQYMSRIVERY-----TNSPYVKGA---RFYVTVGRNQLAAKEV 194
            V   QRA +        +   + V  Y      +S Y   +   R  + +  N  A   +
Sbjct: 1022 VERGQRALQRNQYGEAREAFQQAVTLYTGPFLPDSLYEDWSVVERERLGLLFNDAA---L 1078

Query: 195  EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
             +GR   + G Y  AI     VL      +  EEA   L+ AY A+     A
Sbjct: 1079 SLGRLLFEEGHYREAITLGWRVLEY---DKAQEEAYQLLIRAYGAIGERGTA 1127


>gi|34540706|ref|NP_905185.1| TPR domain-containing protein [Porphyromonas gingivalis W83]
 gi|34397020|gb|AAQ66084.1| TPR domain protein [Porphyromonas gingivalis W83]
          Length = 579

 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 49/161 (30%), Gaps = 29/161 (18%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           ++     A   + + S  FP +    +  L + +V   AG+  +A  +      Q   + 
Sbjct: 112 RQGRADDAVRLYEEMSEQFP-SEDELRFKLANMYV--QAGEIDKAIYIYNRMEAQN--AV 166

Query: 129 NVDYVYYLVGMSYAQMIR-DVPYDQRATKLMLQYMSRIVERYT--------------NSP 173
           N          S    IR  +      T   L  + R+  R+               +S 
Sbjct: 167 NAADA------SNYAEIRARLYLMTGQTNKALNELRRLCNRFPEVNEFRLKYAGTLLDSE 220

Query: 174 YVKGARFYVTVG--RNQLAA-KEVEIGRYYLKRGEYVAAIP 211
               A   + +    +  +      +  YYL   E  AAI 
Sbjct: 221 KYDEAYEQLQLIARTDSTSGLYHFAMASYYLGTNEKEAAIN 261


>gi|148264128|ref|YP_001230834.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4]
 gi|146397628|gb|ABQ26261.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4]
          Length = 757

 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 63/184 (34%), Gaps = 32/184 (17%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           E A  F+ +    +A + + Q     P     R+ L         AG+ ++A    +  I
Sbjct: 10  ESAQRFILKGQIDRAIKDYEQIVALDPKEIRHRQRLAELLV---RAGRKEEAIGEYDA-I 65

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
            +Y      D  Y+L  ++  + I+ +  D    K+ L                      
Sbjct: 66  GKY----YADNGYFLKAIAVYKQIQKL--DSGNIKVTLTL--------------ASLNEK 105

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA----EEAMARL---V 234
             +  N LA   + +  YY K G+   A+   + +LA  +D         E +  +    
Sbjct: 106 QGLIGNALAEYGLSV-DYYEKNGQLSEALKVIEQMLAIDADNPATCQKYAEMLYVMGVHE 164

Query: 235 EAYV 238
           +AY 
Sbjct: 165 KAYQ 168


>gi|332673923|gb|AEE70740.1| periplasmic protein [Helicobacter pylori 83]
          Length = 331

 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 22/145 (15%), Positives = 61/145 (42%), Gaps = 19/145 (13%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS----RDFPFAGVARK 95
           +++     ++   D+  Q+E++++A+  LK++++++A E          R + +   A  
Sbjct: 189 KKTQEKAKIEFDKDLSKQKEIFQEALTLLKDKSYAEARERLLWLEANSYRLY-YVRYA-- 245

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
                  V Y   KY++A    +E      ++  +  + +    ++ ++  D  Y     
Sbjct: 246 ----LGEVAYGEKKYREAIKYYKESALLNKKASYMPVLLWHTAWAFKKIKDDQNY----- 296

Query: 156 KLMLQYMSRIVERYTNSPYVKGARF 180
               ++++ +   Y +S   K A+ 
Sbjct: 297 ---YKFLNTLQHLYPSSEQAKMAKK 318


>gi|329851664|ref|ZP_08266421.1| tetratricopeptide repeat family protein [Asticcacaulis biprosthecum
           C19]
 gi|328840510|gb|EGF90082.1| tetratricopeptide repeat family protein [Asticcacaulis biprosthecum
           C19]
          Length = 719

 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 25/79 (31%), Gaps = 5/79 (6%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD-FPFAG-VARKSLLMSAFV 103
             +D    +   R  +++A   LK  N +++   F        P       +  L  A +
Sbjct: 141 TDIDYRQGIAAARNRFDQAEALLKSGNLTESETQFEALLSQPCPLPEGYIDRVQLRLASI 200

Query: 104 QYSAGKYQQA---ASLGEE 119
                 + +A    +  + 
Sbjct: 201 STKQNDFDEAERRLAAVDR 219


>gi|323977086|gb|EGB72173.1| TPR repeat-containing protein [Escherichia coli TW10509]
          Length = 389

 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 62/186 (33%), Gaps = 36/186 (19%)

Query: 64  AVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
              ++    + +A + FNQ     DF    + +   +  A       ++Q+A  + E  +
Sbjct: 114 GRDYMAAGLYDRAEDMFNQLTDETDFRIGALQQLLQIYQA-----TSEWQKAIDVAERLV 168

Query: 122 TQYPESKNVDYVYYL--VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
               + + V+  ++   + + +     D+       K              NS       
Sbjct: 169 KLGKDKQRVEIAHFYCEIALQHM-ASDDLDRAMALLKKGAAADK-------NS------- 213

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                     A   + +GR ++ +GEY  A+   Q V++   D E   E +  L   Y  
Sbjct: 214 ----------ARVSIMMGRVFMAKGEYAKAVESLQRVIS--QDRELVSETLEMLQTCYQQ 261

Query: 240 LALMDE 245
           L    E
Sbjct: 262 LGKTAE 267


>gi|317014511|gb|ADU81947.1| hypothetical protein HPGAM_05800 [Helicobacter pylori Gambia94/24]
          Length = 331

 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 20/149 (13%), Positives = 58/149 (38%), Gaps = 27/149 (18%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR--------DFPFAG 91
           +++     ++   D+  Q+E++++A+ F + +++++A E                +    
Sbjct: 189 KKTQEKAKVEFDKDLSKQKEIFQEALSFFRNKSYAEAKERLLWLEANSYRLYYVRYVLGE 248

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
           VA           Y   +Y++A    +E      ++  +  + +    S+ ++  D  Y 
Sbjct: 249 VA-----------YGEKRYREAIKYYKESALLNQKASYMPVLLWHTAWSFKKIKDDQNY- 296

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARF 180
                   ++++ +   Y +S   K A+ 
Sbjct: 297 -------YKFLNTLQRLYPSSEQAKMAQK 318


>gi|297466224|ref|XP_002704323.1| PREDICTED: RNA polymerase II associated protein 3 [Bos taurus]
          Length = 705

 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 44/141 (31%), Gaps = 17/141 (12%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D +    + EK   + K+  + +A E + +     P+  V        A   +   K+  
Sbjct: 129 DSQKALALKEKGNKYFKQGKYDEAIECYTKGMDADPYNPVLPT---NRASAYFRLKKFAV 185

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A S     I     S    Y     G +   + +         +   +   +++E   N+
Sbjct: 186 AESDCNLAIALN-RSYTKAYA--RRGAARFALQK--------LEDAKKDYEKVLELEPNN 234

Query: 173 PYVKGARFYVTVGRNQLAAKE 193
                A   +      L +KE
Sbjct: 235 ---FEATNELRKINQALTSKE 252


>gi|283780494|ref|YP_003371249.1| hypothetical protein Psta_2721 [Pirellula staleyi DSM 6068]
 gi|283438947|gb|ADB17389.1| hypothetical protein Psta_2721 [Pirellula staleyi DSM 6068]
          Length = 385

 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 53/125 (42%), Gaps = 18/125 (14%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCS-RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y++A++ L ++N   A +        + P+  +A  +    A     + +++++  L  E
Sbjct: 109 YKEALVLLGDENIPAAIDSLTALKASEDPY--LAADASYYLARAYLLSERFEESMPLLSE 166

Query: 120 YITQYP-ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
             T+Y  +S       +L G++ AQM+             L+ +++ +E++      K A
Sbjct: 167 LQTKYQSQSVRAGEALFLQGVAEAQMLNRP--------AALEALTKFLEQH------KDA 212

Query: 179 RFYVT 183
              + 
Sbjct: 213 PERMR 217


>gi|260893000|ref|YP_003239097.1| glycosyl transferase family 2 [Ammonifex degensii KC4]
 gi|260865141|gb|ACX52247.1| glycosyl transferase family 2 [Ammonifex degensii KC4]
          Length = 414

 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 65/207 (31%), Gaps = 25/207 (12%)

Query: 64  AVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
            V + ++ N+S+A + F    +   P      K L       Y AG+  +A       + 
Sbjct: 211 GVEYFRQGNYSRATQAFLRAAAGSSPAVVYGPKLLKYLVQSLYLAGEKDEALRAATNGLA 270

Query: 123 QYPESKNVDYV----YYLVGMSYAQMIRDVPYDQRATKL--MLQYMSRIVERYTNSPYVK 176
            YP+   + +      +  G       ++     RA +       +   V  Y    Y+ 
Sbjct: 271 VYPDHPYLHFARGVLLFEKG--DYAAAQEAFLQARAHRQCPAYYAVEEAVTGYQTLYYLG 328

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL--ANYSDAE---------- 224
                       LA   +   R   +  E+V A+ R   +L    Y +            
Sbjct: 329 RCAEERGDLEEALA-HYLAAVR---ENTEFVPAVARIVHILNPREYPEDTVESLNRVFDL 384

Query: 225 HAEEAMARLVEAYVALALMDEAREVVS 251
            A  A   L E ++A    + AR  + 
Sbjct: 385 SAPRARRILAEIFLAEGAAELARRFLQ 411


>gi|258545332|ref|ZP_05705566.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
 gi|258519435|gb|EEV88294.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
          Length = 469

 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 30/81 (37%), Gaps = 8/81 (9%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
             Y    +L   +  ++P  K++   YY    +   + +    D       L  + ++++
Sbjct: 393 NDYDIVLALTRNFAQRHPGHKHILENYYCAARA---LDKKGQRD-----KSLHLLQQLID 444

Query: 168 RYTNSPYVKGARFYVTVGRNQ 188
            Y + P +   R    + + Q
Sbjct: 445 HYPDHPKIAQVRRSYELLQKQ 465


>gi|302877727|ref|YP_003846291.1| cellulose synthase operon C domain-containing protein [Gallionella
           capsiferriformans ES-2]
 gi|302580516|gb|ADL54527.1| cellulose synthase operon C domain protein [Gallionella
           capsiferriformans ES-2]
          Length = 1236

 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 61/201 (30%), Gaps = 50/201 (24%)

Query: 61  YEKAVLFLKEQNF-------SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY-QQ 112
           Y +A L  +  N        S A + F Q     P     R SL       Y +      
Sbjct: 382 YSQASLLREAGNLYIAAHQPSYAVKAFEQAVSVDPKNPWVRFSLAK----HYISLDLIPL 437

Query: 113 AASLGEEYITQYPESKNVDYVY---------YLVGMSYAQMIR--DVPYDQRATKLMLQY 161
           A  + +E +   P+   +  V          Y   +     I    +  D R TK     
Sbjct: 438 ARGVIQEGVNLSPDDPAMHQVQALVLLSLDDYKGALDSLNQIPENQLTQDLRETKNSA-- 495

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
              +++      Y + A   +  G  + A   + + +  L +G+Y A             
Sbjct: 496 ---LIKY-----YSQQANEKIAQGNRKEAMHIMSVAQT-LAQGDYSA------------- 533

Query: 222 DAEHAEEAMARLVEAYVALAL 242
             E   EA  RL +    L L
Sbjct: 534 -TEQVAEAWFRLDQ--QKLGL 551


>gi|291287013|ref|YP_003503829.1| hypothetical protein Dacet_1101 [Denitrovibrio acetiphilus DSM
           12809]
 gi|290884173|gb|ADD67873.1| hypothetical protein Dacet_1101 [Denitrovibrio acetiphilus DSM
           12809]
          Length = 884

 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 19/49 (38%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
            V+   E  + +A   F +    FP +  + KSL M+       G+   
Sbjct: 823 GVISYNEGKYEEAAIQFMKSHYLFPTSEYSAKSLKMTIEAYKKMGRNDD 871


>gi|224026054|ref|ZP_03644420.1| hypothetical protein BACCOPRO_02807 [Bacteroides coprophilus DSM
           18228]
 gi|224019290|gb|EEF77288.1| hypothetical protein BACCOPRO_02807 [Bacteroides coprophilus DSM
           18228]
          Length = 726

 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 56/194 (28%), Gaps = 43/194 (22%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
                      + + A     +  + +A + F       P      +      F      
Sbjct: 484 PLAPLNHTTENLSDTANQLFSKGYWQEAADLFRDLGEKTPDNPEVMQ---KLGFSLLKLK 540

Query: 109 KYQQAASLGEEYITQYPES----KNVDYVY-----YLVGMSYAQMIRDVPYD-------- 151
           KY +AA   ++     P+     +++   Y     Y   + Y + ++++  D        
Sbjct: 541 KYPRAAQAFQQADLLKPDHVWTLRHLAQCYKHMHDYPKALEYFEKVKEIQPDNLNLLLQI 600

Query: 152 ------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
                 QR     L Y  ++        Y+              A +   IG  Y   G+
Sbjct: 601 GQCLATQRMYDQALTYFFKV-------EYLDKTPVN--------ARR--AIGWCYFMTGK 643

Query: 206 YVAAIPRFQLVLAN 219
           Y  A+  +Q +L  
Sbjct: 644 YEEALRFYQKLLQT 657


>gi|187779400|ref|ZP_02995873.1| hypothetical protein CLOSPO_02996 [Clostridium sporogenes ATCC
           15579]
 gi|187773025|gb|EDU36827.1| hypothetical protein CLOSPO_02996 [Clostridium sporogenes ATCC
           15579]
          Length = 268

 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 40/93 (43%), Gaps = 8/93 (8%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D  Y+   + + ++FL+ +++ +A   F +       +  +  +    AF  Y+  KY  
Sbjct: 137 DKHYKNIYFNRGMVFLEIEDYKRAAIEFTK--AIHEDSRDSE-AYENRAFAYYNLKKYSP 193

Query: 113 AASLGEEYITQYPESKNVDYVYYL-VGMSYAQM 144
           +       +   PE+KN+    YL  G  Y +M
Sbjct: 194 SIKDYTNALKLKPENKNI----YLNRGTMYYKM 222


>gi|218781833|ref|YP_002433151.1| N-acetylmuramoyl-L-alanine amidase [Desulfatibacillum alkenivorans
           AK-01]
 gi|218763217|gb|ACL05683.1| N-acetylmuramoyl-L-alanine amidase [Desulfatibacillum alkenivorans
           AK-01]
          Length = 603

 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 23/73 (31%), Gaps = 4/73 (5%)

Query: 117 GEEYITQYPESKNVDYV---YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
            + Y   Y    N  +     Y   +   + +  + + +      +    RIV+R+  S 
Sbjct: 74  IQGYQKVYKTDPNGPWAAAGLYEAAV-LYEELYQLSHKKTDRAEAVDLCQRIVKRFPKSA 132

Query: 174 YVKGARFYVTVGR 186
           Y   A   +    
Sbjct: 133 YKSKAIDMLAEIN 145


>gi|153007178|ref|YP_001381503.1| Zinc finger-domain-containing protein [Anaeromyxobacter sp.
           Fw109-5]
 gi|152030751|gb|ABS28519.1| MJ0042 family finger-like protein [Anaeromyxobacter sp. Fw109-5]
          Length = 479

 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 43/133 (32%), Gaps = 14/133 (10%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           R  + +  +A       ++  A E F + + D P       +L           +Y  AA
Sbjct: 361 RGPKALLAEAGRLRARGDYRGALELFGRVASDDPQNA---DALAGRGLCYLDLSRYAPAA 417

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
           +  E  +   P   +      L+G++ A   +    D       ++   R +  + +   
Sbjct: 418 ASFEAALELVPAHADA-----LLGLAEAYRAQGRDAD------AIRRYERYLAEHPDGEE 466

Query: 175 VKGARFYVTVGRN 187
              AR  +   R 
Sbjct: 467 AAVARNAIAELRR 479


>gi|154496554|ref|ZP_02035250.1| hypothetical protein BACCAP_00846 [Bacteroides capillosus ATCC
           29799]
 gi|150274187|gb|EDN01278.1| hypothetical protein BACCAP_00846 [Bacteroides capillosus ATCC
           29799]
          Length = 509

 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 23/85 (27%), Gaps = 16/85 (18%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +      I   +A   + G  + SS                 Y  A   L   ++  A  
Sbjct: 230 MILVPAAIVVIVAGSLIFGSLKNSS----------------AYNNAADLLASGDYDGAAT 273

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFV 103
            F         A  A++++   A  
Sbjct: 274 AFEALGDYKDSADQAKQAMYDKAMA 298


>gi|116329852|ref|YP_799570.1| hypothetical protein LBJ_0060 [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116123541|gb|ABJ74812.1| Conserved hypothetical protein [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 1031

 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 25/75 (33%), Gaps = 5/75 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A    +  N  +A    ++    +       K + +   + +    Y  A     +Y
Sbjct: 886 YSHARQLYRNGNVKEAI---DELMDLYSKTPEDSKVIKLLGLLSFKDKDYVTAVETLGKY 942

Query: 121 ITQYPESKNVDYVYY 135
           +     S+  +Y YY
Sbjct: 943 LELN--SELSEYWYY 955


>gi|116329537|ref|YP_799257.1| hypothetical protein LBL_3014 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116122281|gb|ABJ80324.1| Conserved hypothetical protein [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
          Length = 1058

 Score = 35.9 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 25/75 (33%), Gaps = 5/75 (6%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A    +  N  +A    ++    +       K + +   + +    Y  A     +Y
Sbjct: 913 YSHARQLYRNGNVKEAI---DELMDLYSKTPEDSKVIKLLGLLSFKDKDYVTAVETLGKY 969

Query: 121 ITQYPESKNVDYVYY 135
           +     S+  +Y YY
Sbjct: 970 LELN--SELSEYWYY 982


>gi|332708793|ref|ZP_08428764.1| hypothetical protein LYNGBM3L_32380 [Lyngbya majuscula 3L]
 gi|332352335|gb|EGJ31904.1| hypothetical protein LYNGBM3L_32380 [Lyngbya majuscula 3L]
          Length = 421

 Score = 35.9 bits (82), Expect = 6.7,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 24/67 (35%), Gaps = 3/67 (4%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y + ++ ++  ++  A +   +  +  P     R  L+         G Y+QA       
Sbjct: 238 YHRGLVRIELGDYRGAIDDLTKLLQSNPEN---RDVLIHRGNAYIQMGDYRQAIEDYSRV 294

Query: 121 ITQYPES 127
           IT  P  
Sbjct: 295 ITLKPND 301



 Score = 35.5 bits (81), Expect = 8.8,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 74/215 (34%), Gaps = 45/215 (20%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY-----SAGKYQQAASLG 117
           +A+  +    + +A E FN      P     + +    A+          G Y++A    
Sbjct: 172 QAINKVNTGKYREALEDFNWLLEVDP-----KNAQ---AYCYRGIVHCKLGDYRRAIQDL 223

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
            + +   P+      V Y  G+   ++           +  +  ++++++    +     
Sbjct: 224 GQAMELNPQD---AQVRYHRGLVRIEL--------GDYRGAIDDLTKLLQSNPEN----- 267

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
                   R+ L    +  G  Y++ G+Y  AI  +  V+    +   +    A   E +
Sbjct: 268 --------RDVL----IHRGNAYIQMGDYRQAIEDYSRVITLKPNDAQSYRYRATAREKF 315

Query: 238 VAL-ALMDEAREVVSLIQERYPQGYWARYVETLVK 271
             L    ++ ++  +L    + Q  W  Y + L K
Sbjct: 316 EDLRGAFEDYQQAANLY---FDQQDWTNYRKLLDK 347


>gi|312947508|gb|ADR28335.1| TPR repeat-containing protein [Escherichia coli O83:H1 str. NRG
           857C]
          Length = 385

 Score = 35.9 bits (82), Expect = 6.7,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 30/76 (39%), Gaps = 3/76 (3%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
            +   +  ++  A++ ++ +N++ A E F         +     +    A     + KY 
Sbjct: 267 AEPLLEPAIFISALVNMELKNYTLAVEQFAFIVGI---SPHFTTAKYNLAKSLRMSKKYD 323

Query: 112 QAASLGEEYITQYPES 127
           QA     EYI+  P S
Sbjct: 324 QAIQHFYEYISLMPSS 339


>gi|299746995|ref|XP_001839394.2| hypothetical protein CC1G_11094 [Coprinopsis cinerea okayama7#130]
 gi|298407318|gb|EAU82408.2| hypothetical protein CC1G_11094 [Coprinopsis cinerea okayama7#130]
          Length = 287

 Score = 35.9 bits (82), Expect = 6.7,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 43/108 (39%), Gaps = 12/108 (11%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           R  +  +   S I+ R   S ++      V + R  L    +   + Y+   +Y +A+  
Sbjct: 22  RKYREAIATYSTIINR---SRHLAEPPVPVPLLRVVL----LNRAQCYINIKDYDSAVND 74

Query: 213 FQLVLANYSDAEHAEEAMA-----RLVEAYVALALMDEAREVVSLIQE 255
              VL  Y  +   +  +      RL ++Y  L ++DEA E   L  +
Sbjct: 75  CLRVLQRYHSSRPEDAQLMKKVHWRLGKSYFNLDMLDEAMEQKRLYDQ 122


>gi|298247838|ref|ZP_06971643.1| transcriptional regulator, XRE family [Ktedonobacter racemifer DSM
           44963]
 gi|297550497|gb|EFH84363.1| transcriptional regulator, XRE family [Ktedonobacter racemifer DSM
           44963]
          Length = 699

 Score = 35.9 bits (82), Expect = 6.7,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 33/71 (46%), Gaps = 13/71 (18%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
            ++   E++ +A+  L EQ+F+ A             +     SL   A + +  G+Y++
Sbjct: 629 QLQQAEELFRQAIQ-LCEQSFTGA------------QSPYLAISLTNLASLYFKQGRYEE 675

Query: 113 AASLGEEYITQ 123
           A +L + +I+ 
Sbjct: 676 AQALSQRFISL 686


>gi|284929258|ref|YP_003421780.1| tetratricopeptide repeat protein [cyanobacterium UCYN-A]
 gi|284809702|gb|ADB95399.1| tetratricopeptide repeat protein [cyanobacterium UCYN-A]
          Length = 175

 Score = 35.9 bits (82), Expect = 6.7,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 51/141 (36%), Gaps = 24/141 (17%)

Query: 56  YQREVYEKAVLFLKEQNFSKAYEYFNQ-CS---RDFPFAGVARKSLL--MSAFVQYSAGK 109
             +E YE   L+L ++ + +A   FN+         P      ++L+     F   S  +
Sbjct: 51  SAQEYYELGSLYLNKKLYIQATNLFNKGLEIGKNLEPEN----QALIYNALGFSYLSQEQ 106

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
              A    +  I  +P+        Y++ ++      +     +  +  ++   + ++  
Sbjct: 107 IDLAIRNYKNAIKLHPQ--------YIIALNNLANAYEKK---QMIEKAVETYEQTLKSD 155

Query: 170 TNSPYVKGARFYVTVGRNQLA 190
            N+     A+  V +   +LA
Sbjct: 156 LNNK---IAKRRVKILSKRLA 173


>gi|229829323|ref|ZP_04455392.1| hypothetical protein GCWU000342_01410 [Shuttleworthia satelles DSM
           14600]
 gi|229792486|gb|EEP28600.1| hypothetical protein GCWU000342_01410 [Shuttleworthia satelles DSM
           14600]
          Length = 325

 Score = 35.9 bits (82), Expect = 6.7,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 52/162 (32%), Gaps = 31/162 (19%)

Query: 16  AYQLYKFALTIFFSIAVCFLV-GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
             +     L+    +AV  +V       S++   D             + +  + + ++ 
Sbjct: 1   MQKKKMRILSAVLLLAVFMVVTACSSNQSQEAKEDRT-----------EGIRAMAQGSYG 49

Query: 75  KAYEYFN-QCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAASLGEEYITQYPESKN 129
           KA + F     +    +     S L + +     Q+++G    A +   E I    ++KN
Sbjct: 50  KAQDLFEQALEKS---SDPKTSSGLDNYYYKAIAQFNSGDEDGAIATYSELIKA--DAKN 104

Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            D  Y+L G  Y           +          + ++   N
Sbjct: 105 AD-AYFLRGNVYLSK--------QDAGSAETDFGQALQIDPN 137


>gi|254511903|ref|ZP_05123970.1| TPR domain protein [Rhodobacteraceae bacterium KLH11]
 gi|221535614|gb|EEE38602.1| TPR domain protein [Rhodobacteraceae bacterium KLH11]
          Length = 218

 Score = 35.9 bits (82), Expect = 6.7,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 22/75 (29%), Gaps = 14/75 (18%)

Query: 62  EKAVLFLKEQ-------NFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQ 112
            +A   L          +   A + FN      P +A    +++     FV Y    Y  
Sbjct: 96  AQAQSLLDRGMARREAWDLIGALDEFNALVEYCPDYAEGYNQRA-----FVNYLRQDYGA 150

Query: 113 AASLGEEYITQYPES 127
           A    +  I   P  
Sbjct: 151 ALVDLDRAIALSPNH 165


>gi|221483022|gb|EEE21346.1| heat shock protein 70 (HSP70)-interacting protein, putative
           [Toxoplasma gondii GT1]
          Length = 565

 Score = 35.9 bits (82), Expect = 6.7,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 53/180 (29%), Gaps = 44/180 (24%)

Query: 49  DSVTDVRYQREVY--EKAVLFLKEQNFSKA-YEYFNQCSRDFP----FAGVARKSLLMSA 101
           D   +      +Y   KA ++++  ++ K   E      R +     F+ VA K     A
Sbjct: 268 DEAIEKNPNEILYLNNKAAVYMELGDYDKCLAECQKALDRRYECKADFSKVA-KVYCRMA 326

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
             +  +G Y  A                     Y   +             R T+  L  
Sbjct: 327 ACKTRSGDYSGAI------------------AMYEKALCEDNN--------RMTRNALNE 360

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
           + +          +K  +         LA +  E G  Y K+G+Y AA   +   +    
Sbjct: 361 VKK----------LKEKKEKEDYINPALAEQHREKGNEYFKQGDYPAAKKEYDEAIRRNP 410


>gi|148689732|gb|EDL21679.1| transmembrane and tetratricopeptide repeat containing 2 [Mus
           musculus]
          Length = 719

 Score = 35.9 bits (82), Expect = 6.7,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 34/99 (34%), Gaps = 20/99 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYF--------NQCSRDFPFAGVARKS-----LLMSAFVQYSAG 108
              ++ + +    +A   F                    A KS     L     + +  G
Sbjct: 449 NTGIILMNQGKTEEARRTFLKCSEIPDENLKD-----PHAHKSSVTSCLYNLGKLYHEQG 503

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYY-LVGMSYAQMIR 146
           +Y++A S+  E I + P         Y ++G +Y ++ +
Sbjct: 504 RYEEALSVYREAIQKMPRH-FAPQSLYNMMGEAYMRLSK 541


>gi|108805656|ref|YP_645593.1| TPR repeat-containing protein [Rubrobacter xylanophilus DSM 9941]
 gi|108766899|gb|ABG05781.1| TPR repeat [Rubrobacter xylanophilus DSM 9941]
          Length = 187

 Score = 35.9 bits (82), Expect = 6.7,   Method: Composition-based stats.
 Identities = 18/118 (15%), Positives = 36/118 (30%), Gaps = 21/118 (17%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAG-VARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           +AV   ++  + KA   +       P A   +  +  M A     AG    A    E  I
Sbjct: 77  RAVSAFRKGEYEKAAAIYEDLISRRPLARHYSALAACMDA-----AGNPHAALEAAERAI 131

Query: 122 TQYPESKNVDYVYY------------LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
               +   +   YY                S  +M+     ++R  +   + +  + +
Sbjct: 132 K---QDPRLGIAYYNRASALAALGERRRARSDLEMVFRTDSNRRLRRAAEEALRSLEK 186


>gi|332830446|gb|EGK03074.1| hypothetical protein HMPREF9455_01324 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 684

 Score = 35.9 bits (82), Expect = 6.7,   Method: Composition-based stats.
 Identities = 13/109 (11%), Positives = 35/109 (32%), Gaps = 14/109 (12%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
              ++ ++++++ +A +Y N   + +P      +  L    +    G   QA     + I
Sbjct: 130 NMGIVNIQKKDYEEAEKYLNTLLKSYPT--YT-QGFLTRGALYQEKGDTLQAFENYNQAI 186

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
                 K +   Y + G+ Y           +     +  +   +    
Sbjct: 187 KL---DKYLPQSYSMRGLLYYYK--------KDYDKAMADLDEAIRIDP 224


>gi|332520025|ref|ZP_08396489.1| Tetratricopeptide TPR_1 repeat-containing protein [Lacinutrix
           algicola 5H-3-7-4]
 gi|332044584|gb|EGI80778.1| Tetratricopeptide TPR_1 repeat-containing protein [Lacinutrix
           algicola 5H-3-7-4]
          Length = 686

 Score = 35.9 bits (82), Expect = 6.7,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 38/111 (34%), Gaps = 14/111 (12%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++   +L+   ++KA ++F    + +P    AR   L         GK  +A +L  + +
Sbjct: 24  QEGFTYLETGKYAKAEQFFENILKQYPDNKTAR---LCYGRAIGLNGKPDEANNLFTKLL 80

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
             YP    V        ++Y + +               Y   ++     S
Sbjct: 81  ADYPNDFEVK-------LNYGESLLWTSNFP----KAKTYFKTLINEDPKS 120


>gi|328722998|ref|XP_003247728.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like
           [Acyrthosiphon pisum]
          Length = 458

 Score = 35.9 bits (82), Expect = 6.7,   Method: Composition-based stats.
 Identities = 8/74 (10%), Positives = 24/74 (32%), Gaps = 11/74 (14%)

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
                 Y +GK+ ++    ++ +   P   N     + +GM+Y ++              
Sbjct: 260 NLGDAYYKSGKFGKSILKYKQLLETNPNRTN---ACFQLGMAYLKL--------EDYHNA 308

Query: 159 LQYMSRIVERYTNS 172
                +++     +
Sbjct: 309 ADAFKKVIILDPKN 322


>gi|255020673|ref|ZP_05292735.1| TPR repeat-containing protein [Acidithiobacillus caldus ATCC 51756]
 gi|254969909|gb|EET27409.1| TPR repeat-containing protein [Acidithiobacillus caldus ATCC 51756]
          Length = 541

 Score = 35.9 bits (82), Expect = 6.7,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 34/77 (44%), Gaps = 4/77 (5%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           +    +Y   +L   +  ++ A +YF +       + +A +  L  A  +Y  G+ ++A 
Sbjct: 293 QSPIPLYYLGLLAEAQARWNTALQYFQRIQD----SALALELRLHIAQAEYRLGRREKAL 348

Query: 115 SLGEEYITQYPESKNVD 131
           +  +    ++P++  + 
Sbjct: 349 ADLDSLAREHPDNTQIA 365


>gi|242076856|ref|XP_002448364.1| hypothetical protein SORBIDRAFT_06g025910 [Sorghum bicolor]
 gi|241939547|gb|EES12692.1| hypothetical protein SORBIDRAFT_06g025910 [Sorghum bicolor]
          Length = 1069

 Score = 35.9 bits (82), Expect = 6.7,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 54/161 (33%), Gaps = 25/161 (15%)

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
           ++       L  AF +Y  G+ ++A    +  +   P++ +      LV ++   +    
Sbjct: 202 YSNCPAAVRLGIAFCRYKLGQVEKARQAFQRVLELDPQNVDA-----LVALAIMDLQ--- 253

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
             +    +  ++ M +  E Y           Y T+  N LA      G++++       
Sbjct: 254 TNEAGGIRSGMEKMKKAFEIYP----------YYTLALNHLANHYFFTGQHFVVEQLTET 303

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           A+     VL           A   L  +Y +   ++ A   
Sbjct: 304 ALSSSNHVLLK-------SHAYYNLARSYHSKGDIETAGRY 337


>gi|228988227|ref|ZP_04148324.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
          thuringiensis serovar tochigiensis BGSC 4Y1]
 gi|228771524|gb|EEM19993.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
          thuringiensis serovar tochigiensis BGSC 4Y1]
          Length = 273

 Score = 35.9 bits (82), Expect = 6.7,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 24/66 (36%)

Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
           +Q+ K  LT   S ++  L     +   +  L          E+ EKA   L+++    
Sbjct: 1  MFQMKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAEILEKAKPLLEKKGIEL 60

Query: 76 AYEYFN 81
            + F 
Sbjct: 61 EVKKFQ 66


>gi|114650350|ref|XP_001138755.1| PREDICTED: similar to p58 isoform 2 [Pan troglodytes]
          Length = 453

 Score = 35.9 bits (82), Expect = 6.7,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 40/114 (35%), Gaps = 4/114 (3%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASL 116
            ++ E A   +++  ++ A   +    +  P  A    +S            K  +A  +
Sbjct: 218 NKLIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTIRSKERICHCFSKDEKPVEAIRV 277

Query: 117 GEEYITQYPESKNV--DYVY-YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
             E +   P++ N   D    YL+   Y + I+D    Q   +   Q    + +
Sbjct: 278 CSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQQIREGLEK 331


>gi|73537003|ref|XP_847920.1| hypothetical protein [Leishmania major strain Friedlin]
 gi|321438836|emb|CBZ12596.1| conserved hypothetical protein [Leishmania major strain Friedlin]
          Length = 873

 Score = 35.9 bits (82), Expect = 6.7,   Method: Composition-based stats.
 Identities = 12/110 (10%), Positives = 34/110 (30%), Gaps = 5/110 (4%)

Query: 9   ICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL 68
           +       + + +          +  + G    ++    L     VR   + Y + +  +
Sbjct: 31  LEEAAKSEHNVNELLSIHCMRATLAAMKGSMDVTAITAQLAPGEPVRVPVQSYLEGIAAM 90

Query: 69  KEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
              + + A         R   F      +++  A V Y   +Y+++ +  
Sbjct: 91  ARGDLTTARRRLETAVERCEGFGA----AMVCLAAVYYLTSQYEKSYAQY 136


>gi|75760719|ref|ZP_00740743.1| ABC transporter substrate-binding protein [Bacillus thuringiensis
          serovar israelensis ATCC 35646]
 gi|228903490|ref|ZP_04067615.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
          thuringiensis IBL 4222]
 gi|74491803|gb|EAO54995.1| ABC transporter substrate-binding protein [Bacillus thuringiensis
          serovar israelensis ATCC 35646]
 gi|228856175|gb|EEN00710.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
          thuringiensis IBL 4222]
          Length = 273

 Score = 35.9 bits (82), Expect = 6.7,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 24/66 (36%)

Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
           +Q+ K  LT   S ++  L     +   +  L          E+ EKA   L+++    
Sbjct: 1  MFQMKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAEILEKAKPLLEKKGIEL 60

Query: 76 AYEYFN 81
            + F 
Sbjct: 61 EVKKFQ 66


>gi|67527889|ref|XP_661796.1| hypothetical protein AN4192.2 [Aspergillus nidulans FGSC A4]
 gi|40740101|gb|EAA59291.1| hypothetical protein AN4192.2 [Aspergillus nidulans FGSC A4]
 gi|259481206|tpe|CBF74516.1| TPA: DnaJ and TPR domain protein (AFU_orthologue; AFUA_1G05900)
           [Aspergillus nidulans FGSC A4]
          Length = 634

 Score = 35.9 bits (82), Expect = 6.7,   Method: Composition-based stats.
 Identities = 27/224 (12%), Positives = 61/224 (27%), Gaps = 53/224 (23%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGV--ARKSLLMSAFVQYSAGKYQQAASLGEEY 120
               F K+ N+++A E F +     P   +  + ++    A     A  Y  A    E  
Sbjct: 143 AGNKFFKDGNYNRAIEEFTKAIELNPNNSIYRSNRAAANLA-----AHNYLDALEDAERA 197

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT-----NSPYV 175
               P +  +              +  +     A     + +  +          +    
Sbjct: 198 DELDPGNNKI--------------LHRLSRTLTALGRPAEALEVLERMQPPASAADRQNA 243

Query: 176 KGARFYVTVGRNQLAAK---EVEI-----GRYYL-----KRGEYV----------AAIPR 212
           +    ++   +  LA      + +      R  L     +   +           A    
Sbjct: 244 EKMLRFINQAKETLAENRGASMAVFCIDQARQLLGPGVKEPRAWTLLTAEAQLKMATGNS 303

Query: 213 F----QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           F     + +    D     +A+    +AY  L   D+A + + +
Sbjct: 304 FGKAQDIAINMLRDNNQDPDALLIRAKAYYGLGETDQALKSLKM 347


>gi|329765153|ref|ZP_08256735.1| TPR repeat protein [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329138356|gb|EGG42610.1| TPR repeat protein [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 600

 Score = 35.9 bits (82), Expect = 6.8,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 51/151 (33%), Gaps = 47/151 (31%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAASLG 117
           E   + L   N+ KA E F+   +  PF            +      +S  KY  +    
Sbjct: 480 ELGKIHLILHNYDKAIEIFDNALKKNPFNS-------NLLYKKSLAFFSLQKYDASILCL 532

Query: 118 EEYI----TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
           E+ I    + Y      DY  Y    S  QMIR        TK  ++ +S++++      
Sbjct: 533 EK-ISESDSLY------DYAQYQK--SKIQMIRG------NTKQSMEILSKLIK------ 571

Query: 174 YVKGARFYVTVGRNQLAAKEV---EIGRYYL 201
                  Y+       AA E+    I   Y+
Sbjct: 572 -SNNVFKYM-------AANEILFESIADTYM 594


>gi|313887881|ref|ZP_07821560.1| tetratricopeptide repeat protein [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312846047|gb|EFR33429.1| tetratricopeptide repeat protein [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 369

 Score = 35.9 bits (82), Expect = 6.8,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 41/120 (34%), Gaps = 14/120 (11%)

Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
            YY +      + + +            Y  + +    +       R  + + RN ++  
Sbjct: 177 AYYRLAYINLALAKFI--------KANMYFEKFINLSRDEELKDQVRKELEIIRNNVS-- 226

Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
             +  + YL  G+Y  A+ + + +  ++   E           +Y  +  +D+A E   L
Sbjct: 227 -FDSAKTYLSYGDYDKALNQLESISEDFDKDESFY---YTYALSYYKIGDLDKAEEYGKL 282


>gi|258569959|ref|XP_002543783.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
 gi|237904053|gb|EEP78454.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
          Length = 650

 Score = 35.9 bits (82), Expect = 6.8,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 16/57 (28%), Gaps = 13/57 (22%)

Query: 65  VLFLKEQNFSKAYEYFN----QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           V  LK+  +  A            +  P         L  A+  Y  G+  +A    
Sbjct: 45  VALLKQDRYDDAIRVIEDGGDALKQRAP---------LEWAYALYKTGRLDEAIEAA 92


>gi|163736065|ref|ZP_02143488.1| TPR-domain containing protein [Roseobacter litoralis Och 149]
 gi|161390661|gb|EDQ15007.1| TPR-domain containing protein [Roseobacter litoralis Och 149]
          Length = 193

 Score = 35.9 bits (82), Expect = 6.8,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 45/126 (35%), Gaps = 18/126 (14%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLG 117
           + ++    L+ ++ ++A E+ +  +   P FA     ++        Y AG Y  A    
Sbjct: 76  LLKRGREALEAEDNARAVEHLSALTDHAPEFAEGWHARAT-----ALYRAGLYGPALDAL 130

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
            + +   P + N     + +G+   +   D+               R++E   +    K 
Sbjct: 131 HKALLLNPNNFN---AIFGLGV-MLREFGDLER-------SATAFDRVLELNPHHERAKA 179

Query: 178 ARFYVT 183
           A+  + 
Sbjct: 180 AKEQLA 185


>gi|41205683|gb|AAR99603.1| WsaA [Geobacillus stearothermophilus]
          Length = 169

 Score = 35.9 bits (82), Expect = 6.8,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 38/106 (35%), Gaps = 10/106 (9%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
           Y F   +   ++      W+ Q   + +L   T+       Y++A+  +++    +A   
Sbjct: 16  YVFLSLLVLILSGISYAHWKGQQQDEQFLKDYTE-------YQQAIQLMQQGRAEQALPL 68

Query: 80  FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
                  +P         L  A+       +Q+AA   E+ I + P
Sbjct: 69  LRSLLGKYP-DRYNIMRTLGLAYA--MKNDFQKAAFYYEKAIRKRP 111


>gi|22324680|gb|AAM95632.1| FK506 binding protein 4 [Rattus norvegicus]
          Length = 402

 Score = 35.9 bits (82), Expect = 6.8,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 35/84 (41%), Gaps = 2/84 (2%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFS 74
             +++   L    ++A+C L      ++ +    ++  D   ++ ++ +    L   +F 
Sbjct: 255 MQKVHALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFD 314

Query: 75  KAYEYFNQCSRDFPFAGVARKSLL 98
            A   F +  + +P +  A K+ L
Sbjct: 315 LARADFQKVLQLYP-SNKAAKTQL 337


>gi|320158502|ref|YP_004190880.1| TPR domain-containing protein in aerotolerance operon [Vibrio
           vulnificus MO6-24/O]
 gi|319933814|gb|ADV88677.1| TPR domain protein in aerotolerance operon [Vibrio vulnificus
           MO6-24/O]
          Length = 528

 Score = 35.9 bits (82), Expect = 6.8,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 37/105 (35%), Gaps = 24/105 (22%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY- 120
           ++   +  +  + +A ++FN      P         L      Y AG+Y  A S    + 
Sbjct: 323 QQGQRWWNQGQYLQAAKHFND-----P---------LRKGTAYYYAGEYALAHSA---FL 365

Query: 121 -ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
            +   P  +  D   Y    + A+    +     A + +LQ ++ 
Sbjct: 366 TMQNNPSDEAKDLGLYYAASALARQREYL-----AARNLLQSLAD 405


>gi|317177875|dbj|BAJ55664.1| hypothetical protein HPF16_1067 [Helicobacter pylori F16]
          Length = 331

 Score = 35.9 bits (82), Expect = 6.8,   Method: Composition-based stats.
 Identities = 22/145 (15%), Positives = 61/145 (42%), Gaps = 19/145 (13%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS----RDFPFAGVARK 95
           +++     ++   D+  Q+E++++A+  LK++++++A E          R + +   A  
Sbjct: 189 KKTQEKAKIEFDKDLSKQKEIFQEALTLLKDKSYAEARERLLWLEANSYRLY-YVRYA-- 245

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
                  V Y   KY++A    +E      ++  +  + +    ++ ++  D  Y     
Sbjct: 246 ----LGEVAYGEKKYREAIKYYKESALLNKKASYMPVLLWHTAWAFKKIKDDQNY----- 296

Query: 156 KLMLQYMSRIVERYTNSPYVKGARF 180
               ++++ +   Y +S   K A+ 
Sbjct: 297 ---YKFLNTLQHLYPSSEQAKMAKK 318


>gi|221122498|ref|XP_002158546.1| PREDICTED: similar to nephrocystin 3 [Hydra magnipapillata]
          Length = 1144

 Score = 35.9 bits (82), Expect = 6.8,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 8/63 (12%)

Query: 64  AVLFLKEQNFSKAYEYFNQ-------CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
              +  +  + +A +Y+ +         +D P + +A  SL        + G+Y QA   
Sbjct: 560 GNAYCNKGKYDRAIKYYEESLEMNKLIHKDQPHSDIAS-SLNNLGTAYKNKGEYDQAIKY 618

Query: 117 GEE 119
            EE
Sbjct: 619 YEE 621


>gi|218437433|ref|YP_002375762.1| hypothetical protein PCC7424_0428 [Cyanothece sp. PCC 7424]
 gi|218170161|gb|ACK68894.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7424]
          Length = 235

 Score = 35.9 bits (82), Expect = 6.8,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 52/166 (31%), Gaps = 34/166 (20%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
             G Y  A +L ++ I  YP++     VY   G+ Y    ++           ++  ++ 
Sbjct: 53  KQGDYSGAIALLDQLIKWYPQN---ALVYNNRGLLYFWKGQNF--------QAIKDYNQA 101

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
           ++              +    N            Y+ +G + AA+  ++  +        
Sbjct: 102 IKL----------NEKLDKAYN-------NRANCYVSQGNWAAALTDYETAIDLNP---A 141

Query: 226 AEEAMARLVEAYVALALMDEAREV---VSLIQERYPQGYWARYVET 268
             +A          L L D A +      +I  R+    +A    T
Sbjct: 142 NIKAWMNQGITLRELGLYDLALDNFDWALMISHRFQGRLYAERGYT 187


>gi|86606719|ref|YP_475482.1| TPR repeat-containing protein [Synechococcus sp. JA-3-3Ab]
 gi|86555261|gb|ABD00219.1| tetratricopeptide repeat protein [Synechococcus sp. JA-3-3Ab]
          Length = 774

 Score = 35.9 bits (82), Expect = 6.8,   Method: Composition-based stats.
 Identities = 14/111 (12%), Positives = 39/111 (35%), Gaps = 14/111 (12%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  AV   +   +  + E F +  +  P +       + S       G+ ++A +  ++ 
Sbjct: 545 YALAVAQQELGQYEASLEQFRRLVQQRPGSFACWFGQITSLR---RLGRLEEALAAAQQM 601

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
                      + ++ +G+ Y         D +  +  ++  SR+++    
Sbjct: 602 TRLNERDP---WGWFALGLVYG--------DLKEAEKAVEAYSRVLQLTPE 641


>gi|86607074|ref|YP_475837.1| TPR repeat-containing protein [Synechococcus sp. JA-3-3Ab]
 gi|86555616|gb|ABD00574.1| tetratricopeptide repeat family protein [Synechococcus sp.
           JA-3-3Ab]
          Length = 145

 Score = 35.9 bits (82), Expect = 6.8,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 37/120 (30%), Gaps = 11/120 (9%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y++ +  ++  +F  A + F +   + P    AR      A+V   +G    A +  E  
Sbjct: 6   YQEGIAAVQAGDFPAAIQAFRRAVAEDPAHTEAR---YKLAWVLGMSGYLDPALAELEAV 62

Query: 121 ITQYPESKNVDYVYYLVG-----MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
           +   P        +Y  G      +  +   D   D    +        ++    N    
Sbjct: 63  LAADPTHVA---AHYNRGALLLQKAQLEAEVDGQLDLEVLRQAEAAFQTVMRLDPNDQRA 119


>gi|330950469|gb|EGH50729.1| TPR repeat-containing protein [Pseudomonas syringae Cit 7]
          Length = 335

 Score = 35.9 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 10/99 (10%), Positives = 34/99 (34%), Gaps = 14/99 (14%)

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
            ++ E F +  +  P +    ++ L  A +    G  + A +  +      P +      
Sbjct: 142 QQSAEAFQESLKSQPQSA---QNQLQLARLYLQTGDLEPALAALQRATALDPGNIEA--- 195

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
                +++ +++      +   +      ++++E    S
Sbjct: 196 ----ALAHIELLDR----KGQAEQARSLFAQLLEHNPGS 226


>gi|312083203|ref|XP_003143763.1| peptidyl-prolyl cis-trans isomerase [Loa loa]
 gi|307761074|gb|EFO20308.1| peptidyl-prolyl cis-trans isomerase [Loa loa]
          Length = 345

 Score = 35.9 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 47/126 (37%), Gaps = 4/126 (3%)

Query: 1   MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQRE 59
           +  +L R       W   L K  + +F ++++C+L   +   + D   + +  D   ++ 
Sbjct: 222 IDTLLLREKPGDPEWI-DLDKQNIPLFLNLSLCYLNWKQYYEAIDAATEVLKRDKLNEKA 280

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +Y +A   +   +  KA +      R +P +    K  L          + + A +  + 
Sbjct: 281 LYRRAKGRIAVWDLEKAEDDLKMLQRQYPGSTNLVKIELERIQSLIKERE-ESAKNTYKH 339

Query: 120 -YITQY 124
            +   Y
Sbjct: 340 MFKNVY 345


>gi|301168143|emb|CBW27731.1| conserved hypothetical protein [Bacteriovorax marinus SJ]
          Length = 283

 Score = 35.9 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 20/44 (45%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
              +Y +A+  L+ +N+++A E F +    F     +  + L  
Sbjct: 207 PEPIYMQAITQLQLENYAQAKEKFQEVIERFSSTRYSTLAHLKL 250


>gi|229141702|ref|ZP_04270232.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
          cereus BDRD-ST26]
 gi|229158581|ref|ZP_04286640.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
          cereus ATCC 4342]
 gi|228624895|gb|EEK81663.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
          cereus ATCC 4342]
 gi|228641770|gb|EEK98071.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
          cereus BDRD-ST26]
          Length = 273

 Score = 35.9 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 24/66 (36%)

Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
           +Q+ K  LT   S ++  L     +   +  L          E+ EKA   L+++    
Sbjct: 1  MFQMKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAEILEKAKPLLEKKGIEL 60

Query: 76 AYEYFN 81
            + F 
Sbjct: 61 EVKKFQ 66


>gi|209527065|ref|ZP_03275580.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
 gi|209492493|gb|EDZ92833.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
          Length = 581

 Score = 35.9 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 38/114 (33%), Gaps = 17/114 (14%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           + +  + + +  +  A   +++     P +    K++           +Y  A +  ++ 
Sbjct: 224 FHRGEMLMSQHRYVDAIASYDKALELQPASF---KAIFNRGIALQKLHRYNDAIACYDQV 280

Query: 121 ITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
           I   P     DY  ++  GM+               K  L  + R +E    SP
Sbjct: 281 IQLQPN----DYEAWFYKGMALKS---------GWPKTALLSLDRALEINPESP 321


>gi|203284243|ref|YP_002221983.1| hypothetical protein BDU_325 [Borrelia duttonii Ly]
 gi|203287781|ref|YP_002222796.1| putative lipoprotein [Borrelia recurrentis A1]
 gi|201083686|gb|ACH93277.1| uncharacterized conserved protein [Borrelia duttonii Ly]
 gi|201085001|gb|ACH94575.1| putative lipoprotein [Borrelia recurrentis A1]
          Length = 120

 Score = 35.9 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 17/113 (15%), Positives = 36/113 (31%), Gaps = 21/113 (18%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           + K  L +   +  C+ +            D +T+    R   ++A       ++  A +
Sbjct: 1   MNKLILPLTILLVSCYTIAH--------LDDQLTEKTSHRIYLKEAQKAKNINDYQTALK 52

Query: 79  YFNQCSRDF-------PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
            + +  +++                    AF+ Y   K + A  L EE I   
Sbjct: 53  IYEKMIQNYKENKEIVATGKY------EIAFIYYVNNKKETAKKLFEELIQSN 99


>gi|253701242|ref|YP_003022431.1| hypothetical protein GM21_2635 [Geobacter sp. M21]
 gi|251776092|gb|ACT18673.1| conserved hypothetical protein [Geobacter sp. M21]
          Length = 71

 Score = 35.9 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 21/40 (52%)

Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
          +E++E A    K+ N   A + + +    +P + +A+++ 
Sbjct: 24 KELFETAQFEEKQNNKEHAKKLYQEIVDKYPDSPLAKQAQ 63


>gi|121998676|ref|YP_001003463.1| hypothetical protein Hhal_1897 [Halorhodospira halophila SL1]
 gi|121590081|gb|ABM62661.1| TPR repeat-containing protein [Halorhodospira halophila SL1]
          Length = 199

 Score = 35.9 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 42/137 (30%), Gaps = 16/137 (11%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
                L+++ + +A E + +   + P    A    L  A      G+ ++A  + + +I 
Sbjct: 45  AGDRALQDRRYDRALEQYTRALEEAPEHRYAH---LGKATTLLELGELERAIHVYDRFIE 101

Query: 123 QYPESKNVDYVYYLVGMSYAQM--IRDVPYDQRATKLMLQY-------MSRIVERYTNSP 173
                      Y   G++Y ++        D R    + +        ++R      +  
Sbjct: 102 L--IDPEFAGAYANRGIAYDRLGEHEQALADYRKAAELDEAVDDGPGWLTRFFHMGPDGQ 159

Query: 174 YVKGARFYVTVGRNQLA 190
                         QLA
Sbjct: 160 --PSISERADYLEEQLA 174


>gi|332519329|ref|ZP_08395796.1| SH3 type 3 domain protein [Lacinutrix algicola 5H-3-7-4]
 gi|332045177|gb|EGI81370.1| SH3 type 3 domain protein [Lacinutrix algicola 5H-3-7-4]
          Length = 252

 Score = 35.9 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 7/74 (9%), Positives = 23/74 (31%), Gaps = 3/74 (4%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
             + +E+      +  +++A   +    +       + +     A   Y       +   
Sbjct: 19  NEKYFEQGNTLYNQGKYAEALSRYQAILKT---NEHSAELYFNIANAHYKLNHIAPSVYY 75

Query: 117 GEEYITQYPESKNV 130
            E+ +   P  K++
Sbjct: 76  YEKALALKPNDKDI 89


>gi|332025433|gb|EGI65600.1| Pleckstrin-like proteiny domain-containing family G member 5
           [Acromyrmex echinatior]
          Length = 854

 Score = 35.9 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 10/89 (11%), Positives = 25/89 (28%), Gaps = 13/89 (14%)

Query: 117 GEEYITQYPESKNVDYV-------YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
            +  +  +    ++ Y         YL+ M  A      P D     L  +      + +
Sbjct: 322 VDR-LKLFSNIPDI-YAANRYFWTEYLLAMVNASRSSGQPLDPGHLLLGFETFE---QTF 376

Query: 170 -TNSPYVKGARFYVTVGRNQLAAKEVEIG 197
              + Y           +++L   ++   
Sbjct: 377 APYTRYCTEQSKCQQYCKDRLNDNQLFTA 405


>gi|330448366|ref|ZP_08312014.1| tetratricopeptide repeat family protein [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328492557|dbj|GAA06511.1| tetratricopeptide repeat family protein [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 394

 Score = 35.9 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 22/58 (37%), Gaps = 8/58 (13%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA--FVQYSAGKYQQAASLGEE 119
           A L L+E ++ KA    N+  R        +++ +  A     Y    +  A    ++
Sbjct: 316 AQLLLQEGHYQKALTELNKVKRKD------KQADVELAKVRAYYKLNDFDNAIIHAKQ 367


>gi|320661521|gb|EFX28936.1| hypothetical protein ECO5905_01962 [Escherichia coli O55:H7 str.
           USDA 5905]
          Length = 248

 Score = 35.9 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 17/155 (10%), Positives = 47/155 (30%), Gaps = 23/155 (14%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS--AFVQYS 106
           + +      +  Y  A    +   + +A  ++ Q          A ++ +M   A  Q++
Sbjct: 78  EELAIAETNQNHYALANELARLGRYHEAVPHYQQALS----GIFAHEAAMMLSLAQAQFA 133

Query: 107 AGKYQQAASLGEEYITQYPESKNVD-YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
             ++       E+ +   P+ ++ D ++ +   ++           Q            +
Sbjct: 134 IQEFAACQQTLEDVMRYNPDFQSADGHLLFARTLA----------AQEKYADAESEFEVL 183

Query: 166 VERYTNSP---YVKGARFYVTVGRNQLAAKEVEIG 197
           +  Y       Y       ++  R    A E  + 
Sbjct: 184 ISYYPGPQARIYYAEMLAKMSRLRE---ANEQYVA 215


>gi|317052258|ref|YP_004113374.1| hypothetical protein Selin_2098 [Desulfurispirillum indicum S5]
 gi|316947342|gb|ADU66818.1| hypothetical protein Selin_2098 [Desulfurispirillum indicum S5]
          Length = 251

 Score = 35.9 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 10/70 (14%), Positives = 25/70 (35%), Gaps = 8/70 (11%)

Query: 61  YEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +E++   L++ N+++A        +             S +   +  Y   +Y++A    
Sbjct: 54  FEESQKALQKGNYARAIRILEDGKRLKNWQLHLDKQMNSQIGVIY--YLQKEYEKAKEYL 111

Query: 118 EEYITQYPES 127
            + I   P  
Sbjct: 112 NKGI---PRH 118


>gi|317129831|ref|YP_004096113.1| hypothetical protein Bcell_3139 [Bacillus cellulosilyticus DSM
          2522]
 gi|315474779|gb|ADU31382.1| hypothetical protein Bcell_3139 [Bacillus cellulosilyticus DSM
          2522]
          Length = 352

 Score = 35.9 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 17/36 (47%), Gaps = 3/36 (8%)

Query: 60 VYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGV 92
          + EK +  LKE+ +  A +YF    +   + P A  
Sbjct: 22 LVEKGMASLKEKKYYDALKYFEQSTELESEHPQARY 57


>gi|283781715|ref|YP_003372470.1| hypothetical protein Psta_3956 [Pirellula staleyi DSM 6068]
 gi|283440168|gb|ADB18610.1| hypothetical protein Psta_3956 [Pirellula staleyi DSM 6068]
          Length = 126

 Score = 35.9 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 26/59 (44%), Gaps = 10/59 (16%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
           ++Y++A   +   +F+ A + F    +   ++       KSLL         G+Y++A 
Sbjct: 11  QLYDEACKKIHAGDFADAIQLFRRSLELEVNY-------KSLLHLGRCYLELGQYREAI 62


>gi|255710413|ref|XP_002551490.1| KLTH0A00638p [Lachancea thermotolerans]
 gi|238932867|emb|CAR21048.1| KLTH0A00638p [Lachancea thermotolerans]
          Length = 1411

 Score = 35.9 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 47/125 (37%), Gaps = 31/125 (24%)

Query: 98  LMSA--FVQYSA-GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           L  A  +  + A   +  A +L E+ +T+  ++ +        G+        +  ++R 
Sbjct: 450 LDLATTYTYFEAPKNHPTALALFEKLLTENSDNVHAKMG---KGL--------IAIERRN 498

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
            +   + +  + ERY ++              ++ A  E+ +           AAI RF+
Sbjct: 499 WQEAYELLKEVTERYPDN----------YEVLSEFAWSELHL-------DAPDAAIERFK 541

Query: 215 LVLAN 219
            +L N
Sbjct: 542 YILNN 546


>gi|238917531|ref|YP_002931048.1| hypothetical protein EUBELI_01610 [Eubacterium eligens ATCC 27750]
 gi|238872891|gb|ACR72601.1| Hypothetical protein EUBELI_01610 [Eubacterium eligens ATCC 27750]
          Length = 463

 Score = 35.9 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 5/71 (7%)

Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           Y K    VAA    + ++  Y     A+ A     ++YVALA  D+A++    I + Y  
Sbjct: 395 YYKSNYEVAA----ENLVKAYKCNNSADSA-YYAAKSYVALAKTDDAKKYYKYIVDDYST 449

Query: 260 GYWARYVETLV 270
             + +     V
Sbjct: 450 SGYYKEASDYV 460


>gi|255537599|ref|XP_002509866.1| chaperone binding protein, putative [Ricinus communis]
 gi|223549765|gb|EEF51253.1| chaperone binding protein, putative [Ricinus communis]
          Length = 262

 Score = 35.9 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 26/71 (36%), Gaps = 7/71 (9%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAA 114
            +E+ EKA   + E +F  A + +++     P      A ++             + +A 
Sbjct: 2   AQELAEKAKEAIFEDDFKLAIDLYSKAIDLDPTNPEFFADRAQ-----ANIKLNNFTEAV 56

Query: 115 SLGEEYITQYP 125
           +   + I   P
Sbjct: 57  ADANKAIELDP 67


>gi|293346075|ref|XP_002726239.1| PREDICTED: rCG27131-like [Rattus norvegicus]
 gi|293357879|ref|XP_002729227.1| PREDICTED: tetratricopeptide repeat domain 30B [Rattus norvegicus]
 gi|149022323|gb|EDL79217.1| rCG27131 [Rattus norvegicus]
          Length = 664

 Score = 35.9 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 31/76 (40%), Gaps = 7/76 (9%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
            V D  +   VY      +++  +S+A +  +        +  +R  L + A+  Y   +
Sbjct: 8   KVPDGEFTAVVY----RLIRDSRYSEAVQLLSA-ELQ--GSPRSRAGLSLLAYCYYRLQE 60

Query: 110 YQQAASLGEEYITQYP 125
           ++ AA   E+    +P
Sbjct: 61  FELAAECYEQLSQMHP 76


>gi|91788468|ref|YP_549420.1| hypothetical protein Bpro_2606 [Polaromonas sp. JS666]
 gi|91697693|gb|ABE44522.1| conserved hypothetical transmembrane protein [Polaromonas sp.
           JS666]
          Length = 231

 Score = 35.9 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 7/58 (12%), Positives = 22/58 (37%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +Y++    ++  + ++           F     A+++ L++A   Y  G    + +  
Sbjct: 58  MYDEIERAVQSGDQARIDRSLADMKDRFGRTTYAQQAGLLAARAYYDKGNLDASRAAL 115


>gi|18859261|ref|NP_571705.1| protein-kinase, interferon-inducible double stranded RNA dependent
           inhibitor [Danio rerio]
 gi|11545427|gb|AAG37839.1|AF295376_1 interferon-inducible double stranded RNA dependent protein-kinase
           inhibitor [Danio rerio]
          Length = 502

 Score = 35.9 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 12/96 (12%), Positives = 28/96 (29%), Gaps = 10/96 (10%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA-KEVEIGRYYLKRGEYVAAI 210
           Q +T+   +    ++    +               +      E        +RG+   A+
Sbjct: 123 QGSTQEAREDFQAVLNHSPDHKEAHDQLLKADKLESLQEEVHEAH------RRGDCRIAV 176

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
              + V+     +    E+     E Y+ L    +A
Sbjct: 177 QVLEHVIEL---SPWDPESRELRAECYIQLGEPRKA 209


>gi|330985012|gb|EGH83115.1| type IV pilus biogenesis/stability protein PilW [Pseudomonas
           syringae pv. lachrymans str. M301315]
          Length = 252

 Score = 35.9 bits (82), Expect = 7.0,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 24/63 (38%), Gaps = 9/63 (14%)

Query: 64  AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
            +  LK  N  +A E+F +     R  P      +SLL  A + Y   +Y  A    + +
Sbjct: 148 GMTSLKLGNRDQAREHFTKALRLDRQLP------RSLLEMAQMSYEDKQYVPARDYYDRF 201

Query: 121 ITQ 123
              
Sbjct: 202 SQL 204


>gi|312102627|ref|XP_003149957.1| TPR Domain containing protein [Loa loa]
 gi|307754878|gb|EFO14112.1| TPR Domain containing protein [Loa loa]
          Length = 223

 Score = 35.9 bits (82), Expect = 7.0,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 24/59 (40%), Gaps = 2/59 (3%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM--SAFVQYSAGKYQQAASLGE 118
             A ++ K++++ KA + +       P +    +  +M          G+Y +A S  E
Sbjct: 116 NIANIYFKQKDYKKAIKLYQIALDQIPNSQKNTRIKIMNNIGVAFIKCGEYDEADSTFE 174


>gi|300118063|ref|ZP_07055811.1| TPR domain protein [Bacillus cereus SJ1]
 gi|298724374|gb|EFI65068.1| TPR domain protein [Bacillus cereus SJ1]
          Length = 891

 Score = 35.9 bits (82), Expect = 7.0,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 33/96 (34%), Gaps = 4/96 (4%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAF 102
            +  D   D       Y  A    +   + +A + F Q   +         + ++   A 
Sbjct: 591 KLIKDREIDKENNEAAYLLASANFRIGKYQEAVQNFEQALANNAKGIEPYKKDAMRDLAV 650

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                 ++++A  +  +  T+   +++   V YL G
Sbjct: 651 SHMKMKEFEKAEDVIVKMSTK--TNEDKAIVSYLKG 684


>gi|291391808|ref|XP_002712260.1| PREDICTED: hypothetical protein [Oryctolagus cuniculus]
          Length = 665

 Score = 35.9 bits (82), Expect = 7.0,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 34/87 (39%), Gaps = 8/87 (9%)

Query: 66  LFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
             +++  +++A +  + +  R    +  +R  L +  +  Y   ++  AA   E+    +
Sbjct: 20  RLIRDSRYAEAVQLLSGELQR----SPKSRAGLSLLGYCYYRLQEFALAAECYEQLSQLH 75

Query: 125 PESKNVDYVYYL-VGMSYAQMIRDVPY 150
           PE +   Y  Y    +  A +  D   
Sbjct: 76  PELEQ--YRLYQAQALYKACLFPDATR 100


>gi|228968103|ref|ZP_04129108.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
          thuringiensis serovar sotto str. T04001]
 gi|228791594|gb|EEM39191.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
          thuringiensis serovar sotto str. T04001]
          Length = 273

 Score = 35.9 bits (82), Expect = 7.0,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 24/66 (36%)

Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
           +Q+ K  LT   S ++  L     +   +  L          E+ EKA   L+++    
Sbjct: 1  MFQMKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAEILEKAKPLLEKKGIEL 60

Query: 76 AYEYFN 81
            + F 
Sbjct: 61 EVKKFQ 66


>gi|225864173|ref|YP_002749551.1| TPR domain protein [Bacillus cereus 03BB102]
 gi|225789433|gb|ACO29650.1| tetratricopeptide repeat protein [Bacillus cereus 03BB102]
          Length = 891

 Score = 35.9 bits (82), Expect = 7.0,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 33/96 (34%), Gaps = 4/96 (4%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAF 102
            +  D   D       Y  A    +   + +A + F Q   +         + ++   A 
Sbjct: 591 KLIKDREIDKENNEAAYLLASANFRIGKYQEAVQNFEQALANNAKGIEPYKKDAMRDLAV 650

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                 ++++A  +  +  T+   +++   V YL G
Sbjct: 651 SHMKMKEFEKAEDVIVKMSTK--TNEDKAIVSYLKG 684


>gi|198461122|ref|XP_001361920.2| GA17918 [Drosophila pseudoobscura pseudoobscura]
 gi|198137242|gb|EAL26499.2| GA17918 [Drosophila pseudoobscura pseudoobscura]
          Length = 933

 Score = 35.9 bits (82), Expect = 7.0,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 35/79 (44%), Gaps = 11/79 (13%)

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           ++ +    +     +  QA  + E+ +  Y +S+N D +YY +G+ + +        Q  
Sbjct: 638 QAYINRGDILMKLNRTAQAQEVYEQAL-LY-DSENAD-IYYNLGVVFLE--------QGK 686

Query: 155 TKLMLQYMSRIVERYTNSP 173
           ++    Y ++ +E Y +  
Sbjct: 687 SQQAQVYFNKAIELYPDHE 705


>gi|170086688|ref|XP_001874567.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164649767|gb|EDR14008.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 811

 Score = 35.9 bits (82), Expect = 7.0,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 37/105 (35%), Gaps = 20/105 (19%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP---FAGVARKSLLMSAFVQYSAG 108
            D      +     ++L   +F KA E   +    +        A ++ L+ A +    G
Sbjct: 465 ADSWLPLALLRLGTIYLILDDFPKAIEALQEAVDLYEKLNHLSWAAQAQLLLADIARLRG 524

Query: 109 KYQQA----ASLGEEYITQYPESKNVDYVYYLV------GMSYAQ 143
           ++  A    +     +       ++VD  +++       G+++ Q
Sbjct: 525 EHSGAFQLYSEAYNRF-------EDVDDAHHMAACLRGTGITHFQ 562


>gi|124004136|ref|ZP_01688982.1| tetratricopeptide repeat domain protein [Microscilla marina ATCC
           23134]
 gi|123990206|gb|EAY29705.1| tetratricopeptide repeat domain protein [Microscilla marina ATCC
           23134]
          Length = 564

 Score = 35.9 bits (82), Expect = 7.0,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 25/78 (32%), Gaps = 4/78 (5%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF- 102
           + + +    +V  +   Y   +  LK     +A + F +    FP      K  +  AF 
Sbjct: 50  KTLMVPLKKNVYEEFAYYYYGLAALKNNQLEEAKQTFTRLVERFP--DWVNKEEVYYAFG 107

Query: 103 -VQYSAGKYQQAASLGEE 119
            + +    Y  A      
Sbjct: 108 DIYFREKDYTNALKYLNR 125


>gi|152997603|ref|YP_001342438.1| TPR repeat-containing protein [Marinomonas sp. MWYL1]
 gi|150838527|gb|ABR72503.1| Tetratricopeptide TPR_2 repeat protein [Marinomonas sp. MWYL1]
          Length = 603

 Score = 35.9 bits (82), Expect = 7.0,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 3/58 (5%)

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMA-RLVEAYVALALMDEAREVVSLIQERYPQG 260
           G+Y  AI   + +LA   + E + EA+   L  +  +L   DEA + +    + +P+ 
Sbjct: 220 GKYQLAINTSEQLLAK-PNTEKS-EALYLILAFSQKSLGQTDEAIKTLQTASKHFPKN 275


>gi|331016497|gb|EGH96553.1| TPR domain protein [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 364

 Score = 35.9 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 8/78 (10%), Positives = 27/78 (34%), Gaps = 11/78 (14%)

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           ++ L  A +    G  + A +  +   +  P +           +++ +++      +  
Sbjct: 189 QNQLQLARLYLQTGDLEPAVAALQRATSLDPGNIEA-------ALAHIELLDR----KGQ 237

Query: 155 TKLMLQYMSRIVERYTNS 172
            +      + ++ER   S
Sbjct: 238 AEQARSLFAGLLERNPGS 255


>gi|320102467|ref|YP_004178058.1| hypothetical protein Isop_0920 [Isosphaera pallida ATCC 43644]
 gi|319749749|gb|ADV61509.1| hypothetical protein Isop_0920 [Isosphaera pallida ATCC 43644]
          Length = 784

 Score = 35.9 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 24/171 (14%), Positives = 55/171 (32%), Gaps = 20/171 (11%)

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLV-GMSYAQMIRDVPYD-------QRATK-- 156
                +       ++ ++P+S + +    L   +   +  R    D       +RA +  
Sbjct: 455 DDDPSRQIDDLRSFLREFPDSPHREEAIRLANALIQFRTERQSTRDKQRLDSIRRAAELP 514

Query: 157 -----LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR--GEYVAA 209
                 +L      +E +  S Y   A   +     ++  ++      + +R   ++ A 
Sbjct: 515 NADLGDLLDRTRTFLEEHPQSIYRVEAEELIAKFTARMDDRDFTSAVEFSRRFPTQFAAR 574

Query: 210 IPRFQLVLANY-SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           I ++   L  Y S   H  EA+    E +    L    +    +    +P 
Sbjct: 575 IEKYDAYLKTYASGGRHLTEALQAKSEIFKEWDLHSYRQAYQHI--REFPN 623


>gi|228914800|ref|ZP_04078409.1| TPR repeat-containing protein [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228845119|gb|EEM90161.1| TPR repeat-containing protein [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 891

 Score = 35.9 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 33/96 (34%), Gaps = 4/96 (4%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAF 102
            +  D   D       Y  A    +   + +A + F Q   +         + ++   A 
Sbjct: 591 KLIKDREIDKENNEAAYLLASANFRIGKYQEAVQNFEQALANNAKGIEPYKKDAMRDLAV 650

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                 ++++A  +  +  T+   +++   V YL G
Sbjct: 651 SHMKMKEFEKAEDVIVKMSTK--TNEDKAIVSYLKG 684


>gi|196046066|ref|ZP_03113294.1| TPR domain protein [Bacillus cereus 03BB108]
 gi|229091187|ref|ZP_04222410.1| TPR repeat-containing protein [Bacillus cereus Rock3-42]
 gi|196023121|gb|EDX61800.1| TPR domain protein [Bacillus cereus 03BB108]
 gi|228692318|gb|EEL46054.1| TPR repeat-containing protein [Bacillus cereus Rock3-42]
          Length = 891

 Score = 35.9 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 33/96 (34%), Gaps = 4/96 (4%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAF 102
            +  D   D       Y  A    +   + +A + F Q   +         + ++   A 
Sbjct: 591 KLIKDREIDKENNEAAYLLASANFRIGKYQEAVQNFEQALANNAKGIEPYKKDAMRDLAV 650

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                 ++++A  +  +  T+   +++   V YL G
Sbjct: 651 SHMKMKEFEKAEDVIVKMSTK--TNEDKAIVSYLKG 684


>gi|156717228|ref|NP_001096156.1| transmembrane and tetratricopeptide repeat containing 2 [Xenopus
           (Silurana) tropicalis]
 gi|134024146|gb|AAI36040.1| tmtc2 protein [Xenopus (Silurana) tropicalis]
          Length = 836

 Score = 35.9 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 29/55 (52%), Gaps = 2/55 (3%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA-RLVEAYVALALMDEAR 247
             +G+ Y ++G+Y  A+  ++  +      + + +++   + EAY+ L L+ EA 
Sbjct: 610 YNLGKLYHEQGQYEDALIVYKEAIQKMPR-QFSPQSLYNMMGEAYMRLNLVSEAE 663


>gi|323475930|gb|ADX86536.1| Tetratricopeptide TPR_2 repeat protein [Sulfolobus islandicus
           REY15A]
 gi|323478647|gb|ADX83885.1| Tetratricopeptide TPR_2 repeat protein [Sulfolobus islandicus
           HVE10/4]
          Length = 302

 Score = 35.9 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 44/117 (37%), Gaps = 24/117 (20%)

Query: 63  KAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           K  +  + + +++A E +    +          K+L   A+  ++ GKY+QA    +  I
Sbjct: 149 KGDILFQLKKYNEAIEEYRTNLND--------DKNLYAIAYTYFTIGKYEQALEYYDRAI 200

Query: 122 TQYPESKNVDYVYYLVG--MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
              PE     Y Y      + +   I              + + + ++   ++PY+K
Sbjct: 201 GVNPEDP---YHYEGKARTLIFMGKIN----------EAYETIKKAIDIDPDNPYIK 244


>gi|321469818|gb|EFX80797.1| hypothetical protein DAPPUDRAFT_303914 [Daphnia pulex]
          Length = 1186

 Score = 35.9 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 26/77 (33%), Gaps = 4/77 (5%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR--KSLLMSAFV-QYSAGKY-QQA 113
             +  +  L+    ++ KA   F    ++ P    A    S  + A+  QY   K    A
Sbjct: 334 EGLVARGALYANRGSYDKAITDFEAALKERPNHANATNYLSETLVAYAKQYEDEKNVDMA 393

Query: 114 ASLGEEYITQYPESKNV 130
             L ++ +   P     
Sbjct: 394 IQLYQKCLGVNPSHPEA 410


>gi|311032128|ref|ZP_07710218.1| hypothetical protein Bm3-1_16589 [Bacillus sp. m3-13]
          Length = 681

 Score = 35.9 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 8/57 (14%), Positives = 19/57 (33%), Gaps = 5/57 (8%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           Y +  ++   +++  A   +     +      A+K     A   Y  G   +A  + 
Sbjct: 49  YAQGEVYFHSKDYESAIYKWENVHNE--LEPWAKK---NIADAYYDLGMLVEAEDIY 100


>gi|309805726|ref|ZP_07699766.1| tetratricopeptide repeat protein [Lactobacillus iners LactinV
           09V1-c]
 gi|309809275|ref|ZP_07703144.1| tetratricopeptide repeat protein [Lactobacillus iners SPIN
           2503V10-D]
 gi|308164979|gb|EFO67222.1| tetratricopeptide repeat protein [Lactobacillus iners LactinV
           09V1-c]
 gi|308170388|gb|EFO72412.1| tetratricopeptide repeat protein [Lactobacillus iners SPIN
           2503V10-D]
          Length = 415

 Score = 35.9 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 20/140 (14%), Positives = 50/140 (35%), Gaps = 7/140 (5%)

Query: 24  LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
           + IF  I  C     + + + ++  +++  +      Y+  ++ +   N+ +A + F   
Sbjct: 171 VAIFQRIMSCLAKMGKYEEAAEIIQNNMDSLLNIDSQYDAGLIMMATSNWKQAIKLFQAV 230

Query: 84  SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
               P            A   ++ G+  +A  +    I+        D   Y +G   A 
Sbjct: 231 IDSQP--DY-VNVYPNLAKAYFNIGELNKALDVANAGISYN----EYDISLYRIGSKAAL 283

Query: 144 MIRDVPYDQRATKLMLQYMS 163
            ++D    Q+  +  +  +S
Sbjct: 284 SLKDYDQAQQILEKGVDILS 303


>gi|308069471|ref|YP_003871076.1| hypothetical protein [Paenibacillus polymyxa E681]
 gi|305858750|gb|ADM70538.1| TPR repeat-containing protein [Paenibacillus polymyxa E681]
          Length = 210

 Score = 35.9 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 27/79 (34%), Gaps = 5/79 (6%)

Query: 38  WERQSSRDVYLDSVTDVRYQREV--YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
             R +      D       ++E+  + +   + +   + +A + F Q  + FP +    +
Sbjct: 58  CLRAAGFSAETDMTDTELPEKELPAFNRGQGYYRLLMYPEAIQQFEQVLQHFPNS-W--Q 114

Query: 96  SLLMSAFVQYSAGKYQQAA 114
           S +      +      +A 
Sbjct: 115 SRMYMGMAYFQLDDPAEAV 133



 Score = 35.5 bits (81), Expect = 8.8,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 6/61 (9%)

Query: 189 LAAKEVEI---GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
           L  KE+     G+ Y +   Y  AI +F+ VL ++ ++  +      +  AY  L    E
Sbjct: 75  LPEKELPAFNRGQGYYRLLMYPEAIQQFEQVLQHFPNSWQSR---MYMGMAYFQLDDPAE 131

Query: 246 A 246
           A
Sbjct: 132 A 132


>gi|260940341|ref|XP_002614470.1| hypothetical protein CLUG_05248 [Clavispora lusitaniae ATCC 42720]
 gi|238851656|gb|EEQ41120.1| hypothetical protein CLUG_05248 [Clavispora lusitaniae ATCC 42720]
          Length = 754

 Score = 35.9 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 38/141 (26%), Gaps = 28/141 (19%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGK 109
           D       Y    + +   +F+ AYE F Q        P              + Y   +
Sbjct: 364 DPSDAHSWYYLGRVHMIRGDFNAAYEAFQQAVNRDSRNP-TFWC-----SIGVLYYQISQ 417

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSY---AQMIRDVPYDQRATKLMLQYMSRIV 166
           Y+ A       I   P    +  V+Y +G  Y      I D           L    +  
Sbjct: 418 YRDALDAYTRAIRLNP---YISEVWYDLGTLYETCNNQISD----------ALDAYRQAE 464

Query: 167 ERYTNSPYVKGARFYVTVGRN 187
                +P++   +  +     
Sbjct: 465 RLDPGNPHI---KARLDQLVK 482


>gi|224125128|ref|XP_002329900.1| predicted protein [Populus trichocarpa]
 gi|222871137|gb|EEF08268.1| predicted protein [Populus trichocarpa]
          Length = 397

 Score = 35.9 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 24/72 (33%), Gaps = 7/72 (9%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAAS 115
           +E   KA+  L +    +A E+  +     P +    A ++ +          K   A  
Sbjct: 119 QEAKAKAMEALSQGKLEEAIEHLTEAISLNPTSAIMYATRATV-----YIKMKKPNAAIR 173

Query: 116 LGEEYITQYPES 127
                +   P+S
Sbjct: 174 DANAALEINPDS 185


>gi|260814574|ref|XP_002601989.1| hypothetical protein BRAFLDRAFT_82574 [Branchiostoma floridae]
 gi|229287294|gb|EEN58001.1| hypothetical protein BRAFLDRAFT_82574 [Branchiostoma floridae]
          Length = 500

 Score = 35.9 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 6/75 (8%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAG 108
           S  DV  + + Y      LKE++   A E F +             K+L     + +  G
Sbjct: 167 SEPDVDLENQYYNS--KALKEEDPKAALESFQKVLDLEEEKGEWGFKALKQMIKINFKLG 224

Query: 109 KYQQAASLGEEYITQ 123
            Y++   + + Y   
Sbjct: 225 NYEE---MMKRYKQL 236


>gi|196033782|ref|ZP_03101193.1| TPR domain protein [Bacillus cereus W]
 gi|228945816|ref|ZP_04108162.1| TPR repeat-containing protein [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|195993462|gb|EDX57419.1| TPR domain protein [Bacillus cereus W]
 gi|228813881|gb|EEM60156.1| TPR repeat-containing protein [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
          Length = 891

 Score = 35.9 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 33/96 (34%), Gaps = 4/96 (4%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAF 102
            +  D   D       Y  A    +   + +A + F Q   +         + ++   A 
Sbjct: 591 KLIKDREIDKENNEAAYLLASANFRIGKYQEAVQNFEQALANNAKGIEPYKKDAMRDLAV 650

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                 ++++A  +  +  T+   +++   V YL G
Sbjct: 651 SHMKMKEFEKAEDVIVKMSTK--TNEDKAIVSYLKG 684


>gi|118594949|ref|ZP_01552296.1| hypothetical protein MB2181_04735 [Methylophilales bacterium
           HTCC2181]
 gi|118440727|gb|EAV47354.1| hypothetical protein MB2181_04735 [Methylophilales bacterium
           HTCC2181]
          Length = 181

 Score = 35.9 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 38/86 (44%), Gaps = 7/86 (8%)

Query: 83  CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
            + ++ F      SL  SA+     G+Y  A       +  +PES+N+D +YY +G  Y 
Sbjct: 50  INDNYEF-----LSLYSSAYQLGEQGEYDNAIEKFTRLLKMFPESRNIDEIYYNIGTLYL 104

Query: 143 Q--MIRDVPYDQRATKLMLQYMSRIV 166
           +  + + +  D + T    Q +   +
Sbjct: 105 KDALTKPLSDDGKVTAENFQKLQSAI 130


>gi|156743909|ref|YP_001434038.1| hypothetical protein Rcas_3987 [Roseiflexus castenholzii DSM 13941]
 gi|156235237|gb|ABU60020.1| Tetratricopeptide TPR_2 repeat protein [Roseiflexus castenholzii
           DSM 13941]
          Length = 1092

 Score = 35.9 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 25/65 (38%), Gaps = 3/65 (4%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y   +L+ +  ++ +A E     + D      A  +  M      + G+  +AA   E+ 
Sbjct: 270 YSLGLLYQERGDYQRAVELLQGAAGD---PEYALSAHYMLGQAYQALGQLPEAAHEYEQT 326

Query: 121 ITQYP 125
           I   P
Sbjct: 327 IRLLP 331


>gi|300822073|ref|ZP_07102216.1| tetratricopeptide repeat protein [Escherichia coli MS 119-7]
 gi|300525436|gb|EFK46505.1| tetratricopeptide repeat protein [Escherichia coli MS 119-7]
          Length = 803

 Score = 35.5 bits (81), Expect = 7.2,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 77/236 (32%), Gaps = 36/236 (15%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P      Y Y  YL G       +++   I  +P
Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556

Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197
             Q         +  +V R   S  V      +   G+   A             ++ + 
Sbjct: 557 RAQWN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
            +  +R +Y AA   +Q VL          +A+  L E  +A      AR  ++ +
Sbjct: 611 DWAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 663


>gi|302657152|ref|XP_003020305.1| hypothetical protein TRV_05603 [Trichophyton verrucosum HKI 0517]
 gi|291184125|gb|EFE39687.1| hypothetical protein TRV_05603 [Trichophyton verrucosum HKI 0517]
          Length = 1131

 Score = 35.5 bits (81), Expect = 7.2,   Method: Composition-based stats.
 Identities = 20/143 (13%), Positives = 44/143 (30%), Gaps = 22/143 (15%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108
            D    +  Y     ++ +  + KAYE + Q        P              + Y   
Sbjct: 356 ADNSDAQSWYLLGRCYMSQAKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIN 409

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +Y+ A       I   P    +  V+Y +G +  +   +   D       L    R  + 
Sbjct: 410 QYRDALDAYSRAIRLNP---YISEVWYDLG-TLYESCNNQTSD------ALDAYGRAADL 459

Query: 169 YTNSPYVKGARFYVTVGRNQLAA 191
              + ++   +  + + ++  A 
Sbjct: 460 DPTNVHI---KARLQLLQSGQAG 479


>gi|182417314|ref|ZP_02948653.1| putative tetratricopeptide repeat domain containing protein
           [Clostridium butyricum 5521]
 gi|237667079|ref|ZP_04527063.1| tetratricopeptide repeat domain protein [Clostridium butyricum E4
           str. BoNT E BL5262]
 gi|182378822|gb|EDT76341.1| putative tetratricopeptide repeat domain containing protein
           [Clostridium butyricum 5521]
 gi|237655427|gb|EEP52983.1| tetratricopeptide repeat domain protein [Clostridium butyricum E4
           str. BoNT E BL5262]
          Length = 986

 Score = 35.5 bits (81), Expect = 7.2,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 39/103 (37%), Gaps = 6/103 (5%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
           + S  V+   + + +    +Y K  + LK +N+ ++ + FN+             + +  
Sbjct: 336 EESLKVFDFVIANDKSIEGIYCKGFVMLKRENYIESIDLFNKVIARD---DKNIDAYINK 392

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
                + G  ++A    E+ I          Y Y+L G +  +
Sbjct: 393 GIALKNVGNIEEAIKCFEKAIYL---DDKFAYAYFLKGTTLFE 432


>gi|149638020|ref|XP_001512438.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
          Length = 838

 Score = 35.5 bits (81), Expect = 7.2,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 27/55 (49%), Gaps = 2/55 (3%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA-RLVEAYVALALMDEAR 247
             +G+ Y ++G Y  A+  ++  +      + A +++   + EAY+ L  + EA 
Sbjct: 612 YNLGKLYHEQGRYEEALGVYKEAIQKMPR-QFAPQSLYNMMGEAYMRLNKLPEAE 665


>gi|157803447|ref|YP_001491996.1| hypothetical protein A1E_01330 [Rickettsia canadensis str. McKiel]
 gi|157784710|gb|ABV73211.1| hypothetical protein A1E_01330 [Rickettsia canadensis str. McKiel]
          Length = 246

 Score = 35.5 bits (81), Expect = 7.2,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 38/109 (34%), Gaps = 22/109 (20%)

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY-VAAIPRFQL 215
                    +++YTNS  +  A F+                  + K+ +Y  AA+     
Sbjct: 136 EAQDKFKDFIKKYTNSSLISNAYFWYGEC--------------FFKQKDYNGAAVNY--- 178

Query: 216 VLANYSDAE---HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
            L  Y ++     + + + +L  +   L    EA  +++ +   +P   
Sbjct: 179 -LKGYKESPKGAKSSDGLLKLALSLGELKKTQEACNMLAKLDREFPTNR 226



 Score = 35.5 bits (81), Expect = 8.5,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 18/46 (39%)

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
             A   Y   K  +A    +++I +Y  S  +   Y+  G  + + 
Sbjct: 123 DLALAAYKDNKLTEAQDKFKDFIKKYTNSSLISNAYFWYGECFFKQ 168


>gi|118400640|ref|XP_001032642.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89286985|gb|EAR84979.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 1356

 Score = 35.5 bits (81), Expect = 7.2,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 28/69 (40%), Gaps = 6/69 (8%)

Query: 64   AVLFLK---EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
            A+  L+   ++N   A + +       P     +++LL  + +     +++ A     EY
Sbjct: 1055 AIAQLQAIFKKNNLSAIKQYQIILEKQPEN---QQALLELSCLFEKNQQFELAEQQISEY 1111

Query: 121  ITQYPESKN 129
            I  YP  + 
Sbjct: 1112 IKIYPNDEK 1120


>gi|309361674|emb|CAP29585.2| hypothetical protein CBG_10075 [Caenorhabditis briggsae AF16]
          Length = 1263

 Score = 35.5 bits (81), Expect = 7.2,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 33/77 (42%), Gaps = 1/77 (1%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           + I   +++R ++++A+  +   +  +   E+    +  L +AY    ++ EA+E +   
Sbjct: 828 MNIAHVFMEREQWMSAVQMYSSAMKKFRK-ENDAMLLHYLAKAYYRANMLSEAKEALERA 886

Query: 254 QERYPQGYWARYVETLV 270
                     ++   +V
Sbjct: 887 MLDQLDNTQLKFNYAIV 903


>gi|300857196|ref|YP_003782180.1| TPR-repeat-containing protein [Clostridium ljungdahlii DSM 13528]
 gi|300437311|gb|ADK17078.1| TPR-repeat-containing protein [Clostridium ljungdahlii DSM 13528]
          Length = 231

 Score = 35.5 bits (81), Expect = 7.2,   Method: Composition-based stats.
 Identities = 12/102 (11%), Positives = 36/102 (35%), Gaps = 12/102 (11%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLM 99
            ++  +      + + + Y++A      + +S A    ++     ++F +     K    
Sbjct: 59  EKNSVIKPADGKKDEEKKYDEAQKLFSNKKYSDAIAKADEIINEDKEF-YKAYNIKG--- 114

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
            A     +  Y++     ++ +   P   N  Y  +   ++Y
Sbjct: 115 IALCY--SNNYEEGMKNIDKALEINP---NFGYARFNKALAY 151


>gi|210621523|ref|ZP_03292683.1| hypothetical protein CLOHIR_00626 [Clostridium hiranonis DSM 13275]
 gi|210154722|gb|EEA85728.1| hypothetical protein CLOHIR_00626 [Clostridium hiranonis DSM 13275]
          Length = 759

 Score = 35.5 bits (81), Expect = 7.2,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 53/165 (32%), Gaps = 38/165 (23%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ------A 113
           + EK  ++ ++ N++K  E   +     P+     ++    A    +  +         A
Sbjct: 6   LLEKCQIWNEDGNYAKIIEELEKI----PYENRTPETDSELARAYANIAEPSDRELFKKA 61

Query: 114 ASLG----EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
             L     E +   +  +  + Y YY     Y +             L L+Y  + +E  
Sbjct: 62  IDLLVPHEEYFEGDHCWNFRMAYAYY-----YLEQE----------GLALRYFEKALEAR 106

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK-RGEYVAAIPRF 213
                    + ++   +  +A       R+ +  R    AA  RF
Sbjct: 107 PGDE---DTKLFINDCKKCIA-----FPRFTMSFRERTQAAWNRF 143


>gi|194292857|ref|YP_002008764.1| hypothetical protein RALTA_B2135 [Cupriavidus taiwanensis LMG
           19424]
 gi|193226761|emb|CAQ72712.1| conserved hypothetical protein, Tetratricopeptide repeats
           [Cupriavidus taiwanensis LMG 19424]
          Length = 749

 Score = 35.5 bits (81), Expect = 7.2,   Method: Composition-based stats.
 Identities = 17/146 (11%), Positives = 47/146 (32%), Gaps = 19/146 (13%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
           +      + + +KA    +  +++ A +   Q  R             + A   Y   ++
Sbjct: 5   IPAAAAPQRLLDKARAQFQADDYAGALKTLGQAERI---GVRTVDKHFLKAASLYKLDRH 61

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
            +A +  E  +  +P+   V      + ++ A  ++   Y     +   + + R ++   
Sbjct: 62  DEALAAVETALESHPKHARV------LALAGAIEVQRARY-----QRAAELLKRSLDIDP 110

Query: 171 NS-----PYVKGARFYVTVGRNQLAA 191
                   Y       +    ++LA 
Sbjct: 111 KGHGVWQEYAAVLYRLMDYEGSRLAG 136


>gi|170522215|gb|ACB20387.1| hypothetical protein [Vibrio alginolyticus]
          Length = 389

 Score = 35.5 bits (81), Expect = 7.2,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 28/83 (33%), Gaps = 11/83 (13%)

Query: 57  QREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA--FVQYSAGKYQQA 113
            R+ Y   + L ++E ++  A    +             K+ +        Y   ++  A
Sbjct: 303 DRQYYWNYSQLLVQEGHYKDAIAALDNVRGR--------KADVALIKTRAYYKLKRFDDA 354

Query: 114 ASLGEEYITQYPESKNVDYVYYL 136
            +  +      P ++   +V YL
Sbjct: 355 LANAKRANEIKPSNQAKSWVKYL 377


>gi|110833213|ref|YP_692072.1| hypothetical protein ABO_0352 [Alcanivorax borkumensis SK2]
 gi|110646324|emb|CAL15800.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
          Length = 153

 Score = 35.5 bits (81), Expect = 7.2,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 50/158 (31%), Gaps = 10/158 (6%)

Query: 14  AWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF 73
            + ++L +  L +   +A C +     +  + +      +      +   A    ++ N 
Sbjct: 2   LFFHRLVRLCL-LSVVMAGCAVKPVMHEPQQPMSASQELEGSPALSLLASAEQARQQGNS 60

Query: 74  SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
           S+A  Y  +     P +    K     A ++ + G  + A     + +   PE       
Sbjct: 61  SRAERYLERALNIAPDSSWLYK---ELADLRLTEGDARGAEGFALKALRLAPEHPE---- 113

Query: 134 YYLVGM-SYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
            Y  G+       RD   D    K   +  + + E   
Sbjct: 114 -YQAGLWELVATARDRQGDAGGAKAARERAAVLREPKP 150


>gi|91228110|ref|ZP_01262152.1| hypothetical protein V12G01_03482 [Vibrio alginolyticus 12G01]
 gi|91188228|gb|EAS74528.1| hypothetical protein V12G01_03482 [Vibrio alginolyticus 12G01]
          Length = 390

 Score = 35.5 bits (81), Expect = 7.2,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 28/83 (33%), Gaps = 11/83 (13%)

Query: 57  QREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA--FVQYSAGKYQQA 113
            R+ Y   + L ++E ++  A    +             K+ +        Y   ++  A
Sbjct: 304 DRQYYWNYSQLLVQEGHYKDAIAALDNVRGR--------KADVALIKTRAYYKLKRFDDA 355

Query: 114 ASLGEEYITQYPESKNVDYVYYL 136
            +  +      P ++   +V YL
Sbjct: 356 LANAKRANEIKPSNQAKSWVKYL 378


>gi|297474370|ref|XP_002687226.1| PREDICTED: transmembrane and tetratricopeptide repeat containing
           2-like [Bos taurus]
 gi|296487987|gb|DAA30100.1| transmembrane and tetratricopeptide repeat containing 2-like [Bos
           taurus]
          Length = 836

 Score = 35.5 bits (81), Expect = 7.2,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 29/55 (52%), Gaps = 2/55 (3%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA-RLVEAYVALALMDEAR 247
             +G+ Y ++G Y  A+  ++  +      + A +++   + EAY+ L+++ EA 
Sbjct: 610 YNLGKLYHEQGHYEDALSVYKEAIQKMPR-QFAPQSLYNMMGEAYMRLSMLPEAE 663


>gi|120554540|ref|YP_958891.1| TPR repeat-containing protein [Marinobacter aquaeolei VT8]
 gi|120324389|gb|ABM18704.1| Tetratricopeptide TPR_2 repeat protein [Marinobacter aquaeolei VT8]
          Length = 900

 Score = 35.5 bits (81), Expect = 7.2,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 22/52 (42%), Gaps = 3/52 (5%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
           E A     + + + A  Y  +     P     ++S LM   ++Y  G+ ++A
Sbjct: 294 EAAASAYNDGDLNTAARYLQEVLNQVPNH---QQSALMLGVIRYRQGRPEEA 342


>gi|332830514|gb|EGK03140.1| hypothetical protein HMPREF9455_00773 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 939

 Score = 35.5 bits (81), Expect = 7.3,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 25/78 (32%), Gaps = 9/78 (11%)

Query: 46  VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
            Y D  T    +  +Y     ++   +++ A    +               L+  A + Y
Sbjct: 428 QYGDEETQKDARHILYN---AYMGMGDYNNA---LDILKSQ---GTNGPDILVKQADIYY 478

Query: 106 SAGKYQQAASLGEEYITQ 123
              +Y  A S  E+ I  
Sbjct: 479 KQQRYPMAVSAYEQAIDM 496


>gi|294674663|ref|YP_003575279.1| hypothetical protein PRU_2004 [Prevotella ruminicola 23]
 gi|294471998|gb|ADE81387.1| tetratricopeptide repeat protein [Prevotella ruminicola 23]
          Length = 681

 Score = 35.5 bits (81), Expect = 7.3,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 25/68 (36%), Gaps = 6/68 (8%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
             +  A  Y  +  +  P      ++    A V Y +G+   A  + ++ I  YP     
Sbjct: 313 GEYDLALTYLEKTLQMDP---KDVRAQATKADVYYESGRVDDAIRVMDDIINSYP---EW 366

Query: 131 DYVYYLVG 138
           DY Y+   
Sbjct: 367 DYAYHRRA 374


>gi|293416857|ref|ZP_06659494.1| hypothetical protein ECDG_04021 [Escherichia coli B185]
 gi|291431433|gb|EFF04418.1| hypothetical protein ECDG_04021 [Escherichia coli B185]
          Length = 248

 Score = 35.5 bits (81), Expect = 7.3,   Method: Composition-based stats.
 Identities = 17/155 (10%), Positives = 47/155 (30%), Gaps = 23/155 (14%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS--AFVQYS 106
           + +      +  Y  A    +   + +A  ++ Q          A ++ +M   A  Q++
Sbjct: 78  EELAIAETNQNHYALANELARLGRYHEAVPHYQQALS----GIFAHEAAMMLSLAQAQFA 133

Query: 107 AGKYQQAASLGEEYITQYPESKNVD-YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
             ++       E+ +   P+ ++ D ++ +   ++           Q            +
Sbjct: 134 IQEFAACQQTLEDVMRYNPDFQSADGHLLFARTLA----------AQEKYADAESEFEVL 183

Query: 166 VERYTNSP---YVKGARFYVTVGRNQLAAKEVEIG 197
           +  Y       Y       ++  R    A E  + 
Sbjct: 184 ISYYPGPQARIYYAEMLAKMSRLRE---ANEQYVA 215


>gi|284928653|ref|YP_003421175.1| tetratricopeptide repeat protein [cyanobacterium UCYN-A]
 gi|284809112|gb|ADB94817.1| tetratricopeptide repeat protein [cyanobacterium UCYN-A]
          Length = 227

 Score = 35.5 bits (81), Expect = 7.3,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 42/97 (43%), Gaps = 13/97 (13%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN-------FSKAYEYFNQCSRDFPFAGVA 93
           +  ++  L+  T+V+ +   Y++A++   + N       +++A E + +  +  P    A
Sbjct: 78  KDKKNRDLNLPTEVQSK---YQQAMMEYDKGNIKSIQQKWNEALENYKRAIQICPNLIFA 134

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
           R   +    + Y  G   +A    +  + +YP S + 
Sbjct: 135 R---VNIPLIYYQFGNNLEAIKEIKYLVKKYPMSPDA 168


>gi|255010071|ref|ZP_05282197.1| hypothetical protein Bfra3_13105 [Bacteroides fragilis 3_1_12]
 gi|313147865|ref|ZP_07810058.1| TPR domain-containing protein [Bacteroides fragilis 3_1_12]
 gi|313136632|gb|EFR53992.1| TPR domain-containing protein [Bacteroides fragilis 3_1_12]
          Length = 585

 Score = 35.5 bits (81), Expect = 7.3,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 63/199 (31%), Gaps = 38/199 (19%)

Query: 61  YEKAVLFL--KEQNFSKAYEYFNQCSRDFPFAGVARK-SLLMSAFVQYSAGKYQQAASLG 117
           Y +A+  L  ++    KA     + +  FP    A++  L     +      Y +  S  
Sbjct: 116 YSQALASLYQQQDQKEKAIGILEKMATRFP----AKQDPLFNLLDLYNQKEDYGKVISTL 171

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
                +  +++ +    + +   Y QM  D        K   + +  +V  Y        
Sbjct: 172 NRIEEKMGKNEQITMEKFRI---YLQMKDD--------KKAFEEIESLVNEYP------- 213

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
               +          +V +G  Y++ G+   A   ++ VLA   D      A+  L   Y
Sbjct: 214 ----MDY------RYQVILGDVYMQNGKKQEAYDTYKKVLAAEPD---NPMALFSLASYY 260

Query: 238 VALALMDEAREVVSLIQER 256
                 +   + +  +   
Sbjct: 261 EQTGQKELFEQQMDTLLLN 279


>gi|254500797|ref|ZP_05112948.1| thioredoxin, putative [Labrenzia alexandrii DFL-11]
 gi|222436868|gb|EEE43547.1| thioredoxin, putative [Labrenzia alexandrii DFL-11]
          Length = 314

 Score = 35.5 bits (81), Expect = 7.3,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 8/84 (9%)

Query: 52  TDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
                  E Y E+A   L ++++ +A + F    +  P      +++   A     A   
Sbjct: 136 PAPANPAEAYLEQATALLADKDYGQAAQLFGALMQAEPDN---VQAVAGLAQCYLGADDL 192

Query: 111 QQAASLGEEYITQYPESKNVDYVY 134
           ++A    E      PE K  D VY
Sbjct: 193 ERAKQALE----LVPEEKRADEVY 212


>gi|15803963|ref|NP_289999.1| hypothetical protein Z4823 [Escherichia coli O157:H7 EDL933]
 gi|15833554|ref|NP_312327.1| hypothetical protein ECs4300 [Escherichia coli O157:H7 str. Sakai]
 gi|168747057|ref|ZP_02772079.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4113]
 gi|168753217|ref|ZP_02778224.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4401]
 gi|168759487|ref|ZP_02784494.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4501]
 gi|168765812|ref|ZP_02790819.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4486]
 gi|168772642|ref|ZP_02797649.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4196]
 gi|168779548|ref|ZP_02804555.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4076]
 gi|168785270|ref|ZP_02810277.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC869]
 gi|168797235|ref|ZP_02822242.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC508]
 gi|195934945|ref|ZP_03080327.1| hypothetical protein EscherichcoliO157_00565 [Escherichia coli
           O157:H7 str. EC4024]
 gi|208808038|ref|ZP_03250375.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4206]
 gi|208813275|ref|ZP_03254604.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4045]
 gi|208819327|ref|ZP_03259647.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4042]
 gi|209396980|ref|YP_002272893.1| hypothetical protein ECH74115_4769 [Escherichia coli O157:H7 str.
           EC4115]
 gi|217325026|ref|ZP_03441110.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           TW14588]
 gi|254795370|ref|YP_003080207.1| hypothetical protein ECSP_4406 [Escherichia coli O157:H7 str.
           TW14359]
 gi|261224734|ref|ZP_05939015.1| hypothetical protein EscherichiacoliO157_09082 [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261254371|ref|ZP_05946904.1| hypothetical protein EscherichiacoliO157EcO_00907 [Escherichia coli
           O157:H7 str. FRIK966]
 gi|291284791|ref|YP_003501609.1| hypothetical protein G2583_4154 [Escherichia coli O55:H7 str.
           CB9615]
 gi|12518104|gb|AAG58560.1|AE005568_10 orf; hypothetical protein [Escherichia coli O157:H7 str. EDL933]
 gi|13363774|dbj|BAB37723.1| putative membrane protein [Escherichia coli O157:H7 str. Sakai]
 gi|187771419|gb|EDU35263.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4196]
 gi|188018422|gb|EDU56544.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4113]
 gi|189002596|gb|EDU71582.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4076]
 gi|189359138|gb|EDU77557.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4401]
 gi|189364470|gb|EDU82889.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4486]
 gi|189369828|gb|EDU88244.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4501]
 gi|189374413|gb|EDU92829.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC869]
 gi|189380152|gb|EDU98568.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC508]
 gi|208727839|gb|EDZ77440.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4206]
 gi|208734552|gb|EDZ83239.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4045]
 gi|208739450|gb|EDZ87132.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4042]
 gi|209158380|gb|ACI35813.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4115]
 gi|217321247|gb|EEC29671.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           TW14588]
 gi|254594770|gb|ACT74131.1| hypothetical protein ECSP_4406 [Escherichia coli O157:H7 str.
           TW14359]
 gi|290764664|gb|ADD58625.1| hypothetical protein G2583_4154 [Escherichia coli O55:H7 str.
           CB9615]
 gi|320191531|gb|EFW66181.1| putative membrane protein [Escherichia coli O157:H7 str. EC1212]
 gi|320639735|gb|EFX09329.1| hypothetical protein ECO5101_01945 [Escherichia coli O157:H7 str.
           G5101]
 gi|320645234|gb|EFX14250.1| hypothetical protein ECO9389_01694 [Escherichia coli O157:H- str.
           493-89]
 gi|320650545|gb|EFX19011.1| hypothetical protein ECO2687_04584 [Escherichia coli O157:H- str. H
           2687]
 gi|320655738|gb|EFX23661.1| hypothetical protein ECO7815_02965 [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320666544|gb|EFX33527.1| hypothetical protein ECOSU61_16050 [Escherichia coli O157:H7 str.
           LSU-61]
 gi|326337579|gb|EGD61414.1| putative membrane protein [Escherichia coli O157:H7 str. 1044]
 gi|326344670|gb|EGD68419.1| putative membrane protein [Escherichia coli O157:H7 str. 1125]
          Length = 248

 Score = 35.5 bits (81), Expect = 7.3,   Method: Composition-based stats.
 Identities = 17/155 (10%), Positives = 47/155 (30%), Gaps = 23/155 (14%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS--AFVQYS 106
           + +      +  Y  A    +   + +A  ++ Q          A ++ +M   A  Q++
Sbjct: 78  EELAIAETNQNHYALANELARLGRYHEAVPHYQQALS----GIFAHEAAMMLSLAQAQFA 133

Query: 107 AGKYQQAASLGEEYITQYPESKNVD-YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
             ++       E+ +   P+ ++ D ++ +   ++           Q            +
Sbjct: 134 IQEFAACQQTLEDVMRYNPDFQSADGHLLFARTLA----------AQEKYADAESEFEVL 183

Query: 166 VERYTNSP---YVKGARFYVTVGRNQLAAKEVEIG 197
           +  Y       Y       ++  R    A E  + 
Sbjct: 184 ISYYPGPQARIYYAEMLAKMSRLRE---ANEQYVA 215


>gi|332710918|ref|ZP_08430854.1| hypothetical protein LYNGBM3L_59420 [Lyngbya majuscula 3L]
 gi|332350232|gb|EGJ29836.1| hypothetical protein LYNGBM3L_59420 [Lyngbya majuscula 3L]
          Length = 481

 Score = 35.5 bits (81), Expect = 7.4,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 24/62 (38%), Gaps = 3/62 (4%)

Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEE---AMARLVEAYVALALMDEAREVVSLIQERY 257
            + G++ +AI  +Q  L  Y    +       +  L  AY  +  +D+A      +   Y
Sbjct: 59  YQLGDFTSAIEYWQTALTTYQQTNNRPNQTIVIENLARAYQQIGQIDQAINYWEQVITNY 118

Query: 258 PQ 259
            Q
Sbjct: 119 QQ 120



 Score = 35.5 bits (81), Expect = 8.1,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 3/53 (5%)

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYS---DAEHAEEAMARLVEAYVALALMDEA 246
            R Y + G+   AI  ++ V+ NY    D +     +  L +AY  L    +A
Sbjct: 95  ARAYQQIGQIDQAINYWEQVITNYQQLGDLQQVGRMLTELAQAYSKLGQNQKA 147


>gi|253998548|ref|YP_003050611.1| hypothetical protein Msip34_0836 [Methylovorus sp. SIP3-4]
 gi|253985227|gb|ACT50084.1| Tetratricopeptide TPR_2 repeat protein [Methylovorus sp. SIP3-4]
          Length = 927

 Score = 35.5 bits (81), Expect = 7.4,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 73/223 (32%), Gaps = 39/223 (17%)

Query: 47  YLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
           Y  ++  V  +  +Y     +F +++ F +A   F    R  P      K+   +     
Sbjct: 232 YKAAIELVPDEASIYNNLGNIFSRKRQFEEALSCFENAIRLQPT--Y-LKAHCNAGNALI 288

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
              + ++A    ++ +  +P+       +  +G++Y+++ R            +    R 
Sbjct: 289 DLERVEEAIHHYKKALEIHPDH---AEAHNSLGIAYSKLSR--------YNEAIASYQRA 337

Query: 166 VERYTNSPYVK-------------GARFYVTVGRNQLAAK------EVEIGRYYLKRGEY 206
           +    N  Y +                  + + +  LA         V +   Y   G +
Sbjct: 338 IALMPN--YAEAICNLGITLCATLEVEAAIPLLKQSLAIYADNLIAHVHLAETYAVLGRF 395

Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
             A P ++  L     +E   + +  L   YV     D A+E 
Sbjct: 396 EEAAPHYEYALKL---SEKNPQLINALANIYVKTGQHDLAKEY 435


>gi|303315563|ref|XP_003067789.1| TPR Domain containing protein [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240107459|gb|EER25644.1| TPR Domain containing protein [Coccidioides posadasii C735 delta
           SOWgp]
 gi|320035356|gb|EFW17297.1| import receptor [Coccidioides posadasii str. Silveira]
          Length = 632

 Score = 35.5 bits (81), Expect = 7.4,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 45/135 (33%), Gaps = 20/135 (14%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGV 92
           +G    ++ +  L    +       Y +A L       ++A + + +     RDF ++  
Sbjct: 392 MGNREAAADNFDLALQQNKDDPDIYYHRAQLHFILGELAEAAKDYQKSIDLDRDFIYSH- 450

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
                +     QY  G    A +     +  +   ++V  VY            ++  DQ
Sbjct: 451 -----IQLGVAQYKMGSVASAMATFRRTLKNF---EDVADVY--------NYYGELLLDQ 494

Query: 153 RATKLMLQYMSRIVE 167
           +     ++   R VE
Sbjct: 495 QKFSEAIEKFDRAVE 509


>gi|238751920|ref|ZP_04613406.1| hypothetical protein yrohd0001_32510 [Yersinia rohdei ATCC 43380]
 gi|238709900|gb|EEQ02132.1| hypothetical protein yrohd0001_32510 [Yersinia rohdei ATCC 43380]
          Length = 389

 Score = 35.5 bits (81), Expect = 7.4,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 59/186 (31%), Gaps = 38/186 (20%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              ++    + +A + FNQ   +  F  +     L+      +   +  A  + E+ +  
Sbjct: 114 GRDYMAAGLYDRAEDMFNQLVEEQDF-RLGALQQLLII--HQATSDWNNAIEVAEKLVKM 170

Query: 124 YPESKNVDYVYY-----LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
             +++ ++  ++     L  MS      D+       K       +              
Sbjct: 171 GKDNQRLEIAHFYCELALQAMS----SDDLDKAMGLLKKAASADKQC------------- 213

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
                      A   +  GR YL +GEY   +   + VL    D E   EA+  L E Y 
Sbjct: 214 -----------ARVSIMQGRLYLAKGEYAKGVDALERVLQ--QDKEVVSEALPLLSECYQ 260

Query: 239 ALALMD 244
            L   +
Sbjct: 261 HLQQPE 266


>gi|196011186|ref|XP_002115457.1| hypothetical protein TRIADDRAFT_59420 [Trichoplax adhaerens]
 gi|190582228|gb|EDV22302.1| hypothetical protein TRIADDRAFT_59420 [Trichoplax adhaerens]
          Length = 1106

 Score = 35.5 bits (81), Expect = 7.4,   Method: Composition-based stats.
 Identities = 36/257 (14%), Positives = 76/257 (29%), Gaps = 70/257 (27%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQ-----CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
              +++L +    +A   + +      S    +     KS      + Y+ GK+++A S+
Sbjct: 184 NLGIVYLDQGKHEEAISMYEKSLKIRLSVLGRYHPDVAKSYNNLGIMYYNQGKHEEALSM 243

Query: 117 GEEYITQ------YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE--- 167
            E+ +        +    +V              +  V   Q   +  +    + ++   
Sbjct: 244 YEKSLKIQLSVFDH-NHPDVA--------KSYNNMGSVYRHQGKHEEAIFMYEKSLKIQL 294

Query: 168 --RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY----------YLKRGEYVAAIPRFQL 215
                N P V  +   + +  N     E  I  Y          Y      V+A   +  
Sbjct: 295 SVYSPNHPDVAKSYNNLGIVYNDQGKHEEAISMYKKSLKIQLSVYGHNHLDVSAS--YNN 352

Query: 216 VLANYSDAEHAEEAMARLVE-------------------------AYVALALMDEA---- 246
           +   YS+    EEA++   +                         AY  L  ++EA    
Sbjct: 353 MGEAYSNQGKHEEAISMYEKSLKFQLSVFDHSHPDINKSYNNIGNAYFNLGKLEEAISMY 412

Query: 247 ----REVVSLIQERYPQ 259
               +  +S+    +P 
Sbjct: 413 KKSLKIQLSVFGHNHPD 429


>gi|146184808|ref|XP_001030190.2| Tubulin-tyrosine ligase family protein [Tetrahymena thermophila]
 gi|146143036|gb|EAR82527.2| Tubulin-tyrosine ligase family protein [Tetrahymena thermophila
           SB210]
          Length = 990

 Score = 35.5 bits (81), Expect = 7.4,   Method: Composition-based stats.
 Identities = 9/70 (12%), Positives = 25/70 (35%), Gaps = 9/70 (12%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
            +  Y++ V  LK + +++A +      +          + ++        ++   + QA
Sbjct: 392 PQSFYQQTVYLLKLKKYNEAIQSAEQEIKLDPR------SEQAYRCIGDAFFAQKDFMQA 445

Query: 114 ASLGEEYITQ 123
               E Y+  
Sbjct: 446 IDAYEIYLQL 455


>gi|118477622|ref|YP_894773.1| TPR repeat-containing protein [Bacillus thuringiensis str. Al
           Hakam]
 gi|229184430|ref|ZP_04311637.1| TPR repeat-containing protein [Bacillus cereus BGSC 6E1]
 gi|118416847|gb|ABK85266.1| TPR-repeat containing protein [Bacillus thuringiensis str. Al
           Hakam]
 gi|228599226|gb|EEK56839.1| TPR repeat-containing protein [Bacillus cereus BGSC 6E1]
          Length = 891

 Score = 35.5 bits (81), Expect = 7.4,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 33/96 (34%), Gaps = 4/96 (4%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAF 102
            +  D   D       Y  A    +   + +A + F Q   +         + ++   A 
Sbjct: 591 KLIKDREIDKENNEAAYLLASANFRIGKYQEAVQNFEQALANNAKGIEPYKKDAMRDLAV 650

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                 ++++A  +  +  T+   +++   V YL G
Sbjct: 651 SHMKMKEFEKAEDVIVKMSTK--TNEDKAIVSYLKG 684


>gi|71280856|ref|YP_267748.1| serine/threonine kinase protein [Colwellia psychrerythraea 34H]
 gi|71146596|gb|AAZ27069.1| serine/threonine protein kinase domain protein [Colwellia
           psychrerythraea 34H]
          Length = 896

 Score = 35.5 bits (81), Expect = 7.4,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 24/64 (37%), Gaps = 4/64 (6%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
           A+LF  +  + KA + F +     P   +    L   AF  +  G   +A     + +  
Sbjct: 634 AILFFSKGQYQKAADTFEEALVLRPSTTL----LYNLAFSYWRMGDLSKAEDALNKMLEI 689

Query: 124 YPES 127
            P +
Sbjct: 690 IPGN 693


>gi|15606362|ref|NP_213741.1| hypothetical protein aq_1088 [Aquifex aeolicus VF5]
 gi|12230801|sp|O67178|Y1088_AQUAE RecName: Full=Uncharacterized protein aq_1088
 gi|2983568|gb|AAC07141.1| hypothetical protein aq_1088 [Aquifex aeolicus VF5]
          Length = 761

 Score = 35.5 bits (81), Expect = 7.4,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 55/172 (31%), Gaps = 27/172 (15%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG-- 91
           FL G  +++   +   S   +   + + +  +L+        A     +  +   F+   
Sbjct: 46  FLSGEPQKAEELLSQVSENSLNSAQGLSDLGLLYFFLGRVEDAERVLKKALK---FSDVD 102

Query: 92  ---VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
               AR   L      YS GK ++A    E  ++  P    +    Y +G+ +       
Sbjct: 103 DALYARLGAL-----YYSQGKLEEAQHYWERALSLNPNKVEI---LYNLGVLHLNK---- 150

Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
                  +  L    R +    +    +  +  + +  N++      +  YY
Sbjct: 151 ----GELEKALDLFERALRLKPDFREAEEKKTLILLSLNRIDE---LVEEYY 195


>gi|113474183|ref|YP_720244.1| hypothetical protein Tery_0291 [Trichodesmium erythraeum IMS101]
 gi|110165231|gb|ABG49771.1| TPR repeat [Trichodesmium erythraeum IMS101]
          Length = 412

 Score = 35.5 bits (81), Expect = 7.4,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 23/63 (36%), Gaps = 11/63 (17%)

Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
           +       Y  G+SY         DQ      +   +R +E+  +SP      F + + R
Sbjct: 264 NPQSAEALYFRGISY--------LDQGDAWEAITNFNRALEKEPDSP---EIYFNMGIAR 312

Query: 187 NQL 189
           + L
Sbjct: 313 SLL 315


>gi|320183851|gb|EFW58683.1| tetratricopeptide repeat protein [Shigella flexneri CDC 796-83]
          Length = 389

 Score = 35.5 bits (81), Expect = 7.4,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 63/186 (33%), Gaps = 36/186 (19%)

Query: 64  AVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
              ++    + +A + FNQ     DF    + +   +  A       ++Q+A  + E  +
Sbjct: 114 GRDYMAAGLYDRAEDMFNQLTDETDFRIGALQQLLQIYQA-----TSEWQKAIDVAERLV 168

Query: 122 TQYPESKNVDYVYYL--VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
               + + V+  ++   + + +     D+       K                       
Sbjct: 169 KLGKDKQRVEIAHFYCELALQHM-ASDDLDRAMTLLKKGAAAD----------------- 210

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                 +N+ A   + +GR ++ +GEY  A+   Q V++   D E   E +  L   Y  
Sbjct: 211 ------KNR-ARVSIMMGRVFMAKGEYAKAVESLQRVIS--QDRELVSETLEMLQTCYQQ 261

Query: 240 LALMDE 245
           L    E
Sbjct: 262 LGKTAE 267


>gi|312131891|ref|YP_003999231.1| tetratricopeptide tpr_2 repeat protein [Leadbetterella byssophila
           DSM 17132]
 gi|311908437|gb|ADQ18878.1| tetratricopeptide TPR_2 repeat protein [Leadbetterella byssophila
           DSM 17132]
          Length = 573

 Score = 35.5 bits (81), Expect = 7.4,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 70/204 (34%), Gaps = 36/204 (17%)

Query: 64  AVLFLKEQNFSKAYEYFNQCS--RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           A L    ++++       +     + P+         M   V Y  G+Y QA    +++I
Sbjct: 279 AKLAFISKDYTSLKRVLGEIKGSTNDPY------IHRMEGIVNYEEGQYTQAIEDFKKFI 332

Query: 122 TQYPESKN--VDYVYYLVGMSYAQMIRDVPYDQRATKL-----------MLQYMSRIVER 168
              P+ +N  +DY Y  +G S+ +M  D    Q A               L   +  V+ 
Sbjct: 333 AANPKDENFGLDYGY--IGKSFLKMTGDEA--QTAINDSLGILNIDKAVSLNDTTMEVDY 388

Query: 169 YTN-----SPYVKGARFYVTVGRNQLAAKEVEIGRY------YLKRGEYVAAIPRFQLVL 217
           Y       S      +  +   +  LA K+     +      + +   +V A    +  L
Sbjct: 389 YGEAAAILSEKGNFDKAALLTEKGVLAKKDPTAQDFASLGTIFFRGRNWVKANDYLEKAL 448

Query: 218 ANYSDAEHAEEAMARLVEAYVALA 241
             Y DA  A  A+A L + Y    
Sbjct: 449 VEYKDAWPAGYALAGLAKTYRDAG 472


>gi|301381180|ref|ZP_07229598.1| TPR domain protein [Pseudomonas syringae pv. tomato Max13]
 gi|302058553|ref|ZP_07250094.1| TPR domain protein [Pseudomonas syringae pv. tomato K40]
 gi|302132593|ref|ZP_07258583.1| TPR domain protein [Pseudomonas syringae pv. tomato NCPPB 1108]
          Length = 364

 Score = 35.5 bits (81), Expect = 7.4,   Method: Composition-based stats.
 Identities = 8/78 (10%), Positives = 27/78 (34%), Gaps = 11/78 (14%)

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           ++ L  A +    G  + A +  +   +  P +           +++ +++      +  
Sbjct: 189 QNQLQLARLYLQTGDLEPAVAALQRATSLDPGNIEA-------ALAHIELLDR----KGQ 237

Query: 155 TKLMLQYMSRIVERYTNS 172
            +      + ++ER   S
Sbjct: 238 AEQARSLFAGLLERNPGS 255


>gi|300937601|ref|ZP_07152410.1| tetratricopeptide repeat protein [Escherichia coli MS 21-1]
 gi|300457331|gb|EFK20824.1| tetratricopeptide repeat protein [Escherichia coli MS 21-1]
          Length = 889

 Score = 35.5 bits (81), Expect = 7.4,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 80/229 (34%), Gaps = 22/229 (9%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
              +S+   +D +        + ++A     +  +++A     Q     P +        
Sbjct: 321 SLSASQRRSIDDIERSLQNDRLSQQAEALENQGKWAQAAALQRQRLALDPGSVW---VTY 377

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149
             +   + AG+  QA +L      Q P   +  Y Y  YL G       +++   +    
Sbjct: 378 RLSQDLWQAGQRTQADTLMRNLAQQKPNDPDQVYAYGLYLSGHDQERAALAHINNLPRAR 437

Query: 150 YDQRATKLMLQYMS-----RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
           ++    + ++  +          R  +S   + A   +   +      ++ +  +  +R 
Sbjct: 438 WN-GNIQELVNRLQSDQILETANRLRDSGKEQDAEAMLRQ-QPPSTRIDLTLADWAQQRR 495

Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           +Y AA   +Q VLA      +  +A+  L E  +A      AR  ++ +
Sbjct: 496 DYTAARTAYQNVLAR---ESNNADAILGLTEVDIAAGDKAAARSQLAKL 541


>gi|291391806|ref|XP_002712258.1| PREDICTED: hypothetical protein [Oryctolagus cuniculus]
          Length = 665

 Score = 35.5 bits (81), Expect = 7.4,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 33/87 (37%), Gaps = 8/87 (9%)

Query: 66  LFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
             +++  +++A +    +  R    +  +R  L +  +  Y   ++  AA   E+    +
Sbjct: 20  RLIRDSRYAEAVQLLGGELQR----SPKSRAGLSLLGYCYYRLQEFALAAECYEQLSQLH 75

Query: 125 PESKNVDYVYYL-VGMSYAQMIRDVPY 150
           PE +   Y  Y    +  A +  D   
Sbjct: 76  PELEQ--YRLYQAQALYKACLFPDATR 100


>gi|251771628|gb|EES52204.1| protein of unknown function [Leptospirillum ferrodiazotrophum]
          Length = 234

 Score = 35.5 bits (81), Expect = 7.4,   Method: Composition-based stats.
 Identities = 15/127 (11%), Positives = 38/127 (29%), Gaps = 36/127 (28%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQA 113
           + +    L   ++ +A + + +    +P                Y  G       +   +
Sbjct: 84  FTEGDRALAAGHYKEALDDYKKIIAAYP----------NLGMAHYKLGMLLRVVKQVDGS 133

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMS------------YAQMIRDVPYDQRATKLMLQY 161
            +  +E I       N+   Y+ +G              Y +  + +  D +A +     
Sbjct: 134 VAELKEAIRL---DPNLAPAYFALGSILWTRGTAMDAEPYFE--KGLTIDPKAPQRAF-- 186

Query: 162 MSRIVER 168
              I++R
Sbjct: 187 FQEIIDR 193


>gi|225012964|ref|ZP_03703382.1| O-antigen polymerase [Flavobacteria bacterium MS024-2A]
 gi|225002949|gb|EEG40927.1| O-antigen polymerase [Flavobacteria bacterium MS024-2A]
          Length = 770

 Score = 35.5 bits (81), Expect = 7.4,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 35/100 (35%), Gaps = 14/100 (14%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           K +  LK  NF +A E F++  +  P+  +         +  +   K   +    ++   
Sbjct: 506 KGMYNLKAGNFERAIELFHKGRKANPYLMINET---NLGYTYHKLNKKDSSLYYSKKAFK 562

Query: 123 QYPESKNVDYVYYLVGMSY----------AQMIRDVPYDQ 152
             P + +  + +YL+ ++              IR    D 
Sbjct: 563 TQPNNISH-FAHYLISLAMHNDSLEIQNAYNEIRKFRTDP 601


>gi|89055803|ref|YP_511254.1| TPR protein [Jannaschia sp. CCS1]
 gi|88865352|gb|ABD56229.1| TPR protein [Jannaschia sp. CCS1]
          Length = 188

 Score = 35.5 bits (81), Expect = 7.4,   Method: Composition-based stats.
 Identities = 9/80 (11%), Positives = 28/80 (35%), Gaps = 7/80 (8%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSA 107
            ++       +  + +  +  ++++ AY++    +   P FA     ++ L      +  
Sbjct: 61  QISGSAAADYLLRRGMEAMASEDYAAAYDHLTALTDHAPEFAEGWNARATL-----FFEQ 115

Query: 108 GKYQQAASLGEEYITQYPES 127
             Y  A +  +  +   P  
Sbjct: 116 QMYGPAIADIQRVLALEPRH 135


>gi|87310163|ref|ZP_01092295.1| probable PKR inhibitor (translation regulation) [Blastopirellula
           marina DSM 3645]
 gi|87287153|gb|EAQ79055.1| probable PKR inhibitor (translation regulation) [Blastopirellula
           marina DSM 3645]
          Length = 556

 Score = 35.5 bits (81), Expect = 7.4,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 57/144 (39%), Gaps = 18/144 (12%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG--K 109
           TD      +  + VL+++++NF KA     Q     P         ++ A+    AG  K
Sbjct: 185 TDPDNVDALKLRGVLYMQQENFEKASADLKQVMEKNP-----NDVAVLQAYADTLAGMKK 239

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           + +A +L ++ + ++P S     V YL       +   +      ++  +Q + +++   
Sbjct: 240 FDEAIALLDKTVAEHPGSP----VGYL-------LRARLKVLAEDSEGAIQDLDQVLAFI 288

Query: 170 TNSPYVKGARFYVTVGRNQLAAKE 193
             S      R  + +  ++ A  E
Sbjct: 289 PRSIPALMMRARLYIDLDRPADAE 312


>gi|46201288|ref|ZP_00208041.1| COG1729: Uncharacterized protein conserved in bacteria
           [Magnetospirillum magnetotacticum MS-1]
          Length = 110

 Score = 35.5 bits (81), Expect = 7.4,   Method: Composition-based stats.
 Identities = 12/97 (12%), Positives = 34/97 (35%), Gaps = 13/97 (13%)

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
              ++ Y N      A++++                 + ++ ++  +   F      Y  
Sbjct: 7   QAFLKTYPNHQLAGNAQYWLGDIA-------------FSQKKDFATSAKLFGEAYKKYPK 53

Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
              A + + +L  ++  L + D+A    +L+   +P 
Sbjct: 54  HTKAPDMLYKLGASFGQLDMKDQACRTYALLFAEHPD 90


>gi|332701624|ref|ZP_08421712.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
           africanus str. Walvis Bay]
 gi|332551773|gb|EGJ48817.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
           africanus str. Walvis Bay]
          Length = 227

 Score = 35.5 bits (81), Expect = 7.5,   Method: Composition-based stats.
 Identities = 14/94 (14%), Positives = 32/94 (34%), Gaps = 16/94 (17%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
           + A+ I  +  +    G     S                 +E+ +       +++A  +F
Sbjct: 4   RIAICIVLAALMTACAGLGLSRSAKNE-------------FEEGLRLYNAGEYAQAVPHF 50

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
            + +++ P    A  + L       + GK+ QA 
Sbjct: 51  QKATQEEP--EYAE-AFLYLGRAYLNQGKWSQAL 81


>gi|326435668|gb|EGD81238.1| tetratricopeptide protein [Salpingoeca sp. ATCC 50818]
          Length = 863

 Score = 35.5 bits (81), Expect = 7.5,   Method: Composition-based stats.
 Identities = 9/66 (13%), Positives = 23/66 (34%), Gaps = 11/66 (16%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQ--------CSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
               ++  + ++ +A E F++             P      ++        +  G Y +A
Sbjct: 444 NIGSVYYSKGDYDRAIECFDKALAVRVETLGEKHPSTA---QTYNNLGGAYHDKGDYDKA 500

Query: 114 ASLGEE 119
            +L E+
Sbjct: 501 IALYEK 506



 Score = 35.1 bits (80), Expect = 9.9,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 76/260 (29%), Gaps = 71/260 (27%)

Query: 61  YEK-AVLFLKEQNFSKAYEYF--------NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           Y      +  + +F KA  Y+               P       S +         G+  
Sbjct: 358 YNNLGTAYYSKGDFDKAIHYYKKALAITVETLGEKHPSTA---DSCVGLGIAYEKKGELD 414

Query: 112 QAASLGEEYITQ--------YPESK----NVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
           +A +  E+ +          +P +     N+  VYY  G        D           L
Sbjct: 415 RAIAFYEQALAIMVEALGEKHPNTADTYNNIGSVYYSKG--------DYDRAIECFDKAL 466

Query: 160 QYM-SRIVERYTNS---------------PYVKGARFY---VTVGRNQLAAKEVEIG-RY 199
                 + E++ ++                Y K    Y   + +    L  K       Y
Sbjct: 467 AVRVETLGEKHPSTAQTYNNLGGAYHDKGDYDKAIALYEKALAITVEALGEKHPSTATSY 526

Query: 200 ------YLKRGEYVAAIPRFQLVLANYSDA-----EHAEEAMARLVEAYVALALMDEA-- 246
                 Y ++GEY  AI  ++  LA Y++          +    L  AYV      +A  
Sbjct: 527 NNLGGAYARKGEYDKAIACYEKALAIYAETLGEKHPSTADTYNNLGAAYVDKGQYGKAIH 586

Query: 247 --REVVSL----IQERYPQG 260
              + +++    + E++P  
Sbjct: 587 HYEQALAIKVETLGEKHPST 606


>gi|325277201|ref|ZP_08142842.1| TPR repeat-containing protein [Pseudomonas sp. TJI-51]
 gi|324097664|gb|EGB95869.1| TPR repeat-containing protein [Pseudomonas sp. TJI-51]
          Length = 573

 Score = 35.5 bits (81), Expect = 7.5,   Method: Composition-based stats.
 Identities = 39/275 (14%), Positives = 78/275 (28%), Gaps = 78/275 (28%)

Query: 42  SSRDVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQC----------------- 83
            ++  +L  V       E+ Y  A++ L+ +++ +A  Y  +                  
Sbjct: 270 DAKGEFLSLVQQYPDDDELRYSLALVCLENKDWDEAEGYLQELVERDSNVDAARLNLGRI 329

Query: 84  -SRDF-------------PFAGVARKSLLMSAFVQYSAGKYQQA---ASLGEEYITQYPE 126
                             P       + L  A +  + G+  +A    +   E       
Sbjct: 330 REERHDPAGALREYALVGPGPDYLP-AQLRQADILIANGRGSEASRLLAEARE------- 381

Query: 127 SKNVDYVY--YLV-GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
               DY    YL+   SY+   +D            Q + + ++RY +   +   R  + 
Sbjct: 382 -AQPDYALQLYLIESESYSNNNKDA--------QANQVLQQAIQRYPDDLNLLYTRAMLA 432

Query: 184 VGRNQLAAKEVE----IGR-----------YY---LKRGEYVAAIPRFQLVLAN-YSDAE 224
             R+ LA  E +    I R            Y    +   Y  A    + ++   +    
Sbjct: 433 EKRDDLAQMEQDLRAIIAREPENAMALNALGYTLADRTTRYAEA----RTLIEKAHQLTP 488

Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
                +  L      L  +D A   +      +P 
Sbjct: 489 DDPAVLDSLGWVNYRLGNLDVAETYLRQAFANFPD 523


>gi|322705241|gb|EFY96828.1| transcriptional corepressor Cyc8 [Metarhizium anisopliae ARSEF 23]
          Length = 860

 Score = 35.5 bits (81), Expect = 7.5,   Method: Composition-based stats.
 Identities = 21/145 (14%), Positives = 47/145 (32%), Gaps = 36/145 (24%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL----------MSA 101
            D +  +  Y     ++ +Q + KAYE +             ++++              
Sbjct: 292 ADNQDAQSWYLLGRCYMAQQKYPKAYEAY-------------QQAVYRDGKNPTFWCSIG 338

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
            + Y   +Y+ A       I   P    +  V+Y +G +  +   +   D       L  
Sbjct: 339 VLYYQINQYRDALDAYSRAIRLNP---YISEVWYDLG-TLYESCNNQIAD------ALDA 388

Query: 162 MSRIVERYTNSPYVKGARFYVTVGR 186
             R  E    +P++   +  + + R
Sbjct: 389 YQRAAELDPGNPHI---KARLQLLR 410


>gi|270262102|ref|ZP_06190374.1| hypothetical protein SOD_b03090 [Serratia odorifera 4Rx13]
 gi|270043978|gb|EFA17070.1| hypothetical protein SOD_b03090 [Serratia odorifera 4Rx13]
          Length = 389

 Score = 35.5 bits (81), Expect = 7.5,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 30/83 (36%), Gaps = 3/83 (3%)

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
                        Q A   + +GR Y+ + EY  A+   Q VL    D E   E +  L 
Sbjct: 199 AMSLLKRAASADKQCARVSIMVGRIYMAQAEYAKAVESLQRVLN--QDKELVSETLPMLH 256

Query: 235 EAYVAL-ALMDEAREVVSLIQER 256
           E Y  L    D A  +   ++E 
Sbjct: 257 ECYQHLENQQDWAEFLKRCVEEN 279


>gi|228985300|ref|ZP_04145463.1| TPR repeat-containing protein [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228774455|gb|EEM22858.1| TPR repeat-containing protein [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 891

 Score = 35.5 bits (81), Expect = 7.5,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 33/96 (34%), Gaps = 4/96 (4%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAF 102
            +  D   D       Y  A    +   + +A + F Q   +         + ++   A 
Sbjct: 591 KLIKDREIDKENNEAAYLLASANFRIGKYQEAVQNFEQALANNAKGIEPYKKDAMRDLAV 650

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                 ++++A  +  +  T+   +++   V YL G
Sbjct: 651 SHMKMKEFEKAEDVIVKMSTK--TNEDKAIVSYLKG 684


>gi|206579869|ref|YP_002238984.1| tetratricopeptide repeat protein [Klebsiella pneumoniae 342]
 gi|290512960|ref|ZP_06552324.1| yciM [Klebsiella sp. 1_1_55]
 gi|206568927|gb|ACI10703.1| tetratricopeptide repeat protein [Klebsiella pneumoniae 342]
 gi|289774573|gb|EFD82577.1| yciM [Klebsiella sp. 1_1_55]
          Length = 389

 Score = 35.5 bits (81), Expect = 7.5,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 59/195 (30%), Gaps = 54/195 (27%)

Query: 64  AVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
              ++    + +A + F Q     DF  + + +   +  A        +Q A  + E  +
Sbjct: 114 GRDYMAAGLYDRAEDMFKQLVDETDFRLSALQQLLQIYQA-----TSDWQSAIEVAERLV 168

Query: 122 TQ----YPESKNVDYVYYLVG-MSYA------QMIRDVPYDQRATKLMLQYMSRIVERYT 170
                 +             G ++        Q +     D       +  + +      
Sbjct: 169 KLGKEKH------------RGEIANFWCELALQQMAANDLD-----KAMALLKKGAAADR 211

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
           NS                 A   + +GR ++++G+Y  A+   + V+    D E   E +
Sbjct: 212 NS-----------------ARVSIMMGRVWMEKGDYAKAVESLERVID--QDKELVGETL 252

Query: 231 ARLVEAYVALALMDE 245
             L   Y  L   +E
Sbjct: 253 EMLQTCYQQLGKAEE 267


>gi|157362878|ref|YP_001469645.1| TPR repeat-containing protein [Thermotoga lettingae TMO]
 gi|157313482|gb|ABV32581.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga lettingae TMO]
          Length = 357

 Score = 35.5 bits (81), Expect = 7.5,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 37/81 (45%), Gaps = 6/81 (7%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
             L L++ +F +   Y ++     P      ++        Y+ G+Y +AAS  E+ I  
Sbjct: 138 GSLMLEKGDFEQGIRYLDKAIEIDP---WLVEAYSSLGEAYYNLGEYARAASYWEKEIEY 194

Query: 124 YPESKNVDYVYYLVGMSYAQM 144
            P++K     Y+++  +Y +M
Sbjct: 195 APDNKFT---YFMLAEAYRKM 212


>gi|94971061|ref|YP_593109.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94553111|gb|ABF43035.1| TPR repeat protein [Candidatus Koribacter versatilis Ellin345]
          Length = 254

 Score = 35.5 bits (81), Expect = 7.5,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 25/58 (43%), Gaps = 1/58 (1%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           Y +AV   +   F  A     +  R+ P     +++  + A+  +  G+ ++A  + E
Sbjct: 131 YRRAVAETELGQFDAAVADLERVVREDPKYDF-QRAPGLLAYAYWKTGQNERATQMFE 187


>gi|4325033|gb|AAD17225.1| tetratricopeptide repeat protein [Nostoc punctiforme PCC 73102]
          Length = 265

 Score = 35.5 bits (81), Expect = 7.5,   Method: Composition-based stats.
 Identities = 8/63 (12%), Positives = 20/63 (31%), Gaps = 9/63 (14%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
           ++       +++N+  A   +    +   + P        L       Y  GK   A + 
Sbjct: 104 LFALGSANFQQKNYQAAVVNYQDGLKLKPNDPEG------LFDLGNAYYLLGKLPDAIAQ 157

Query: 117 GEE 119
            ++
Sbjct: 158 YDK 160


>gi|52143251|ref|YP_083579.1| TPR repeat-containing protein [Bacillus cereus E33L]
 gi|51976720|gb|AAU18270.1| conserved hypothetical protein; TPR-repeat domains [Bacillus cereus
           E33L]
          Length = 891

 Score = 35.5 bits (81), Expect = 7.5,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 33/96 (34%), Gaps = 4/96 (4%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAF 102
            +  D   D       Y  A    +   + +A + F Q   +         + ++   A 
Sbjct: 591 KLIKDREIDKENNEAAYLLASANFRIGKYQEAVQNFEQALANNAKGIEPYKKDAMRDLAV 650

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                 ++++A  +  +  T+   +++   V YL G
Sbjct: 651 SHMKMKEFEKAEDVIVKMSTK--TNEDKAIVSYLKG 684


>gi|20090723|ref|NP_616798.1| hypothetical protein MA1873 [Methanosarcina acetivorans C2A]
 gi|19915778|gb|AAM05278.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
          Length = 306

 Score = 35.5 bits (81), Expect = 7.5,   Method: Composition-based stats.
 Identities = 36/264 (13%), Positives = 81/264 (30%), Gaps = 54/264 (20%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC----SRDFPFAG 91
           +G ER  + +       +      +YE+ V   ++     A + F++      RDFP   
Sbjct: 27  IGLERDRTEEKGEAGNPETGGAESIYEEGVALYRQGRLRLALKAFDRVLEENPRDFP--- 83

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK----NVDYVYYLVGMSYAQMIRD 147
               +L           +Y++A  + E      PE+     N+ +             + 
Sbjct: 84  ----ALYHKGNSLLKLKRYEEALEIFERAAEIKPENAGLWTNMGFAL-----------KK 128

Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY----VTVGRNQLAAKE---------- 193
           +       +  L+   + +            +      +++   +L+  E          
Sbjct: 129 LER----FRDALEAFEKSISLNPVQKNAWEGKDSVLSLISLCEEKLSEYEKILERNPGDP 184

Query: 194 ---VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV- 249
               + G+ +L+ GE   A+  F+  L          EA     +         EA    
Sbjct: 185 DALFKTGKLWLRFGEQEKAMQAFKNALEV---KPENAEAWKLRGKILFKAGSEKEALHAF 241

Query: 250 --VSLIQERYPQGYWARYVETLVK 271
              + ++  +P+  W    +  +K
Sbjct: 242 ENATRLKPDHPEA-WYERGKVFLK 264


>gi|326511269|dbj|BAJ87648.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 842

 Score = 35.5 bits (81), Expect = 7.6,   Method: Composition-based stats.
 Identities = 13/89 (14%), Positives = 30/89 (33%), Gaps = 3/89 (3%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
           +    VG + ++  +          +   +Y    L +    F +A E + +     P  
Sbjct: 420 SALHAVGDDDRAVEEFQKAIDLKPGHVDALYNLGGLNMDAGRFVRAAEMYTRVLSIRP-N 478

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEE 119
               ++ L  A      G+ ++A    +E
Sbjct: 479 HW--RAQLNKAVALLGQGESEEAKKALKE 505


>gi|322795771|gb|EFZ18450.1| hypothetical protein SINV_10406 [Solenopsis invicta]
          Length = 1301

 Score = 35.5 bits (81), Expect = 7.6,   Method: Composition-based stats.
 Identities = 17/125 (13%), Positives = 39/125 (31%), Gaps = 28/125 (22%)

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
           + +  +G+ Y         DQ      +  +  ++    N  +   +             
Sbjct: 550 WAWLQLGLHY--------LDQGDAGQAITALQHVIRADPNDNHSWESL------------ 589

Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
                   YL RG + +A+  +Q  L     + +    + +L    + +    EA+E   
Sbjct: 590 -----ADAYLVRGAHTSALKSYQRALQLSPGSLYP---LIQLANIKLLIGQHREAKENFE 641

Query: 252 LIQER 256
            I + 
Sbjct: 642 SILQN 646


>gi|290990303|ref|XP_002677776.1| serine/threonine protein kinase [Naegleria gruberi]
 gi|284091385|gb|EFC45032.1| serine/threonine protein kinase [Naegleria gruberi]
          Length = 670

 Score = 35.5 bits (81), Expect = 7.6,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 11/55 (20%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLLMS------AFVQYSAGKYQQAASLGEE 119
           +N+ KA EYF++      ++    KS L        A+  ++  KY+ A SL E+
Sbjct: 509 KNYEKAIEYFSK-----AYSVKEWKSRLDVKFYERFAYCYFNIRKYENAYSLYEK 558


>gi|229196436|ref|ZP_04323183.1| TPR repeat-containing protein [Bacillus cereus m1293]
 gi|228587073|gb|EEK45144.1| TPR repeat-containing protein [Bacillus cereus m1293]
          Length = 891

 Score = 35.5 bits (81), Expect = 7.6,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 33/96 (34%), Gaps = 4/96 (4%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAF 102
            +  D   D       Y  A    +   + +A + F Q   +         + ++   A 
Sbjct: 591 KLIKDREIDKENNEAAYLLASANFRIGKYQEAVQNFEQALANNAKGIEPYKKDAMRDLAV 650

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                 ++++A  +  +  T+   +++   V YL G
Sbjct: 651 SHMKMKEFEKAEDVIVKMSTK--TNEDKAIVSYLKG 684


>gi|121535418|ref|ZP_01667229.1| glycosyl transferase, family 2 [Thermosinus carboxydivorans Nor1]
 gi|121306017|gb|EAX46948.1| glycosyl transferase, family 2 [Thermosinus carboxydivorans Nor1]
          Length = 512

 Score = 35.5 bits (81), Expect = 7.6,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 21/60 (35%), Gaps = 7/60 (11%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLG 117
           +Y   +  ++  N+  A     + +       +A +  L  +       AGKY QA    
Sbjct: 280 LY--GLWLMQRHNYQDAVAALEEVANK---GYLAERGRLTALLGDAYSLAGKYDQAVECY 334


>gi|121715724|ref|XP_001275471.1| transcriptional corepressor Cyc8, putative [Aspergillus clavatus
           NRRL 1]
 gi|119403628|gb|EAW14045.1| transcriptional corepressor Cyc8, putative [Aspergillus clavatus
           NRRL 1]
          Length = 878

 Score = 35.5 bits (81), Expect = 7.6,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 46/146 (31%), Gaps = 22/146 (15%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQY 105
               D    +  Y     ++ +  + KAYE + Q        P              + Y
Sbjct: 299 PPHLDNSDAQSWYLLGRCYMSQAKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYY 352

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
              +Y+ A       I   P    +  V+Y +G +  +   +   D       L    R 
Sbjct: 353 QINQYRDALDAYSRAIRLNP---YISEVWYDLG-TLYESCNNQIAD------ALDAYGRA 402

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAA 191
            +    + ++   +  + + ++QL+ 
Sbjct: 403 ADLDPTNVHI---KARLQLLQSQLSG 425


>gi|108757929|ref|YP_630795.1| hypothetical protein MXAN_2576 [Myxococcus xanthus DK 1622]
 gi|108461809|gb|ABF86994.1| putative membrane protein [Myxococcus xanthus DK 1622]
          Length = 488

 Score = 35.5 bits (81), Expect = 7.6,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 25/79 (31%), Gaps = 1/79 (1%)

Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY-VALALMDEAREV 249
              + +G+     G +  A+   +       D   A  A+  L       +     A EV
Sbjct: 403 EHHLFVGQAAAVEGNFPLAVAALESAADTAPDEPTAPRALVLLARVLGERMHDAPRAEEV 462

Query: 250 VSLIQERYPQGYWARYVET 268
              +  RYP    AR+   
Sbjct: 463 YRYVLHRYPDTAAARFASE 481


>gi|78045132|ref|YP_359829.1| glycosyl transferase family protein [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77997247|gb|ABB16146.1| glycosyl transferase, group 2 family [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 364

 Score = 35.5 bits (81), Expect = 7.6,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 45/117 (38%), Gaps = 27/117 (23%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQ----CSRDFPFAGVA-----RKSLLMSAFVQYSAGKY 110
            Y   V + ++Q + KA + F +      +  P    A       SL+          K+
Sbjct: 207 YYNLGVEYYRKQEYEKALQNFQKSFLLIRKKEPGFKYALIWHIVNSLINL-------KKF 259

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           Q+A  + E+    YP    VD VY+  G+ Y          QR+ K  ++   + +E
Sbjct: 260 QEALKVIEDAEQLYPW--YVDLVYF-KGVVYYS--------QRSYKKAIETFMKCLE 305


>gi|33862553|ref|NP_894113.1| SAM-binding motif-containing protein [Prochlorococcus marinus str.
           MIT 9313]
 gi|33640666|emb|CAE20455.1| SAM (and some other nucleotide) binding motif:TPR repeat
           [Prochlorococcus marinus str. MIT 9313]
          Length = 774

 Score = 35.5 bits (81), Expect = 7.6,   Method: Composition-based stats.
 Identities = 19/156 (12%), Positives = 48/156 (30%), Gaps = 23/156 (14%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ-----CSRDFPFAGVAR--KS 96
           ++             ++   A    ++ N ++A + + +      S    F+  A   +S
Sbjct: 11  KNKQPSKKFARIPPDQLKAIAFKHHQQGNINEAQKAYQEFINSGLSDPDVFSNFALICQS 70

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPE----SKNVDYVYYLVGMSYA--QMIRDVPY 150
                      G+  +A ++ +  I  +P       N+ Y+++ +GM       IR    
Sbjct: 71  Q----------GEIDKAINIYKRSIKLFPRHAFSHANLGYLFFQIGMLDDAEAAIRQAIV 120

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
            Q        Y+  ++         +         +
Sbjct: 121 IQPNLANAYSYLGLVLREKGRLTDAEDITRKAIELQ 156


>gi|229155791|ref|ZP_04283897.1| TPR repeat-containing protein [Bacillus cereus ATCC 4342]
 gi|228627777|gb|EEK84498.1| TPR repeat-containing protein [Bacillus cereus ATCC 4342]
          Length = 891

 Score = 35.5 bits (81), Expect = 7.6,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 33/96 (34%), Gaps = 4/96 (4%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAF 102
            +  D   D       Y  A    +   + +A + F Q   +         + ++   A 
Sbjct: 591 KLIKDREIDKENNEAAYLLASANFRIGKYQEAVQNFEQALANNAKGIEPYKKDAMRDLAV 650

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                 ++++A  +  +  T+   +++   V YL G
Sbjct: 651 SHMKMKEFEKAEDVIVKMSTK--TNEDKAIVSYLKG 684


>gi|226496177|ref|NP_001145720.1| hypothetical protein LOC100279224 [Zea mays]
 gi|224029355|gb|ACN33753.1| unknown [Zea mays]
          Length = 321

 Score = 35.5 bits (81), Expect = 7.6,   Method: Composition-based stats.
 Identities = 20/152 (13%), Positives = 47/152 (30%), Gaps = 15/152 (9%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMS 100
           S++++     +      E +E   + L+ + +  A +Y      +         +     
Sbjct: 174 SAKELQEQVRSGDASATEYFELGAVMLRRKFYPAAIKYLQQAIDKWDRDEQDLAQVYNAL 233

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
                   K  +A    ++ +   P      YV      +    + D    Q+  K  L+
Sbjct: 234 GVSYKRENKLDKAIQQFQKAVELQPG-----YV------TAWNNLGDAYEQQKDLKSALK 282

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
               ++    N+     AR  V   R +++  
Sbjct: 283 AFEEVLLFDPNNK---VARPRVDDLRPRVSMY 311


>gi|221194384|ref|ZP_03567441.1| tetratricopeptide repeat domain protein [Atopobium rimae ATCC
           49626]
 gi|221185288|gb|EEE17678.1| tetratricopeptide repeat domain protein [Atopobium rimae ATCC
           49626]
          Length = 473

 Score = 35.5 bits (81), Expect = 7.6,   Method: Composition-based stats.
 Identities = 7/61 (11%), Positives = 19/61 (31%), Gaps = 3/61 (4%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           ++ YE+     +  ++ +A     Q            +   +        G+++ AA   
Sbjct: 3   QQAYEQGKAAYQSGDWLRAVTQLGQVKEA---GEKNGEVDHLLGNAYMKLGQFESAAYAY 59

Query: 118 E 118
            
Sbjct: 60  N 60


>gi|73952285|ref|XP_536294.2| PREDICTED: similar to CG8777-PA [Canis familiaris]
          Length = 1562

 Score = 35.5 bits (81), Expect = 7.6,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 37/93 (39%), Gaps = 6/93 (6%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           K++ +L + +  +A +        +P   +A    L  A + ++   Y QA    +  + 
Sbjct: 390 KSLAYLNKGSLDEASKIMEDLLSSYP--DLAEVHALE-ALIHFTKKDYLQAEKCFQRALE 446

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
              +   V   +Y +G++Y  M  +   D+   
Sbjct: 447 ---KDPEVAEYHYQLGLTYWFMDEETRKDKTKA 476


>gi|50345104|ref|NP_001002225.1| small glutamine-rich tetratricopeptide repeat-containing protein
           beta [Danio rerio]
 gi|49256703|gb|AAH74059.1| Small glutamine-rich tetratricopeptide repeat (TPR)-containing,
           alpha [Danio rerio]
          Length = 306

 Score = 35.5 bits (81), Expect = 7.6,   Method: Composition-based stats.
 Identities = 17/148 (11%), Positives = 45/148 (30%), Gaps = 27/148 (18%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRD---FPFAGVARKSLLMSAF 102
            S  D+    ++  +    +KE+N+S A + + +     +    +       ++      
Sbjct: 79  PSPEDIERAEQLKNEGNNHMKEENYSSAVDCYTKAIELDQRNAVY----YCNRAA----- 129

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
                  Y +A    E  I   P        Y  +G++   M +            + Y 
Sbjct: 130 AHSKLENYTEAMGDCERAIAIDPSYSK---AYGRMGLALTSMSKYP--------EAISYF 178

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLA 190
           ++ +     +     +   +   + + A
Sbjct: 179 NKALVLDPEND-TYKSNLKIVEQKQKEA 205


>gi|269302480|gb|ACZ32580.1| tetratricopeptide repeat family protein [Chlamydophila pneumoniae
           LPCoLN]
          Length = 339

 Score = 35.5 bits (81), Expect = 7.7,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 71/204 (34%), Gaps = 34/204 (16%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D    + +Y KAV+  +  + +++           P      K+ +   F+   + ++ +
Sbjct: 141 DPWNPQSLYNKAVILSEMDDEAESIRLLEVAVAKNPL-YW--KAWVKLGFLLSRSKRWDK 197

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A    E  +   P   ++   +Y +G+ Y  + +        T+L L+     +      
Sbjct: 198 ATEAYERVVQLRP---DLSDGHYNLGLCYLTLDK--------TRLALKAFQEALFL---- 242

Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
              + A  +  VG   +  K++        R  Y A      + L +       E A   
Sbjct: 243 -NAEDADAHFYVGLAHMDLKQM--------REAYEAFNSALSINLEH-------ERAHYL 286

Query: 233 LVEAYVALALMDEAREVVSLIQER 256
           L   +      D+A + +  +Q++
Sbjct: 287 LGYLHHMQGETDKATKELLFLQKK 310


>gi|269837261|ref|YP_003319489.1| hypothetical protein Sthe_1232 [Sphaerobacter thermophilus DSM
           20745]
 gi|269786524|gb|ACZ38667.1| Tetratricopeptide TPR_2 repeat protein [Sphaerobacter thermophilus
           DSM 20745]
          Length = 643

 Score = 35.5 bits (81), Expect = 7.7,   Method: Composition-based stats.
 Identities = 14/115 (12%), Positives = 28/115 (24%), Gaps = 22/115 (19%)

Query: 79  YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV----Y 134
           Y                  L          +   A    E +  ++P+   V  V     
Sbjct: 71  YLLALESWHRQQPNDADVTLALGDAYMRNLRPVLALRTFESFQQRWPDHPQVPEVEQVLM 130

Query: 135 YLV----------------GMSYAQMIRDVP--YDQRATKLMLQYMSRIVERYTN 171
            L                 G+  A +  ++    DQ  T        + ++R+ +
Sbjct: 131 QLRPSVDEMLAEAGLSGEEGLQLAALHEEIQSLMDQGRTSEARATAQKFLKRWPD 185


>gi|229029927|ref|ZP_04185995.1| TPR repeat-containing protein [Bacillus cereus AH1271]
 gi|228731354|gb|EEL82268.1| TPR repeat-containing protein [Bacillus cereus AH1271]
          Length = 891

 Score = 35.5 bits (81), Expect = 7.7,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 33/96 (34%), Gaps = 4/96 (4%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAF 102
            +  D   D       Y  A    +   + +A + F Q   +         + ++   A 
Sbjct: 591 KLIKDREIDKENNEAAYLLASANFRIGKYQEAVQNFEQALANNAKGIEPYKKDAMRDLAV 650

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
                 ++++A  +  +  T+   +++   V YL G
Sbjct: 651 SHMKMKEFEKAEDVIVKMSTK--TNEDKAIVSYLKG 684


>gi|242822337|ref|XP_002487866.1| mitochondrial outer membrane translocase receptor (TOM70), putative
           [Talaromyces stipitatus ATCC 10500]
 gi|218712787|gb|EED12212.1| mitochondrial outer membrane translocase receptor (TOM70), putative
           [Talaromyces stipitatus ATCC 10500]
          Length = 623

 Score = 35.5 bits (81), Expect = 7.7,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 51/154 (33%), Gaps = 16/154 (10%)

Query: 36  VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
           +G +  +  D  L    +       Y +A L      F++A + + +     P    +  
Sbjct: 383 LGNKEGAVDDFELAIAHNKDDPDIYYHRAQLHFILGEFAEAAKDYQKSIDLDPSFIYSH- 441

Query: 96  SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
             +     QY  G    A +  +  + ++    +V Y YY           ++  DQ+  
Sbjct: 442 --IQLGVTQYKLGSVASAMATFKRSVKKFENVPDV-YNYY----------GELLLDQQDY 488

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
           +  ++   + VE    S     A   + +    L
Sbjct: 489 QGAIEKFDKAVEM--ESKIKPTAINVLPLINKAL 520


>gi|253700213|ref|YP_003021402.1| hypothetical protein GM21_1589 [Geobacter sp. M21]
 gi|251775063|gb|ACT17644.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. M21]
          Length = 572

 Score = 35.5 bits (81), Expect = 7.7,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 60/191 (31%), Gaps = 42/191 (21%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY--SAGKYQQAASLG 117
           ++  A L   E +   A     Q     P A       L +A  QY     K ++A +  
Sbjct: 50  LFALARLRAGEGDQDAALALLRQAMASDPGAAY-----LHTAAAQYLLQQHKPEEALAES 104

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           +  I   P          L G     M R+        K  + Y  +++E       V  
Sbjct: 105 QAAIKIDPTFLQ---AQLLSGNILMTMQRE--------KEAIPYYKKVMELDPTKEEVY- 152

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM--ARLVE 235
                           + +  YYLK  EY  A+   + ++    D+     A+    L +
Sbjct: 153 ----------------LHVAIYYLKSFEYEQAVDTLKGLVKAAPDS-----ALGYYYLAK 191

Query: 236 AYVALALMDEA 246
            Y  + L  EA
Sbjct: 192 TYEQMRLPREA 202


>gi|189459397|ref|ZP_03008182.1| hypothetical protein BACCOP_00018 [Bacteroides coprocola DSM 17136]
 gi|189433854|gb|EDV02839.1| hypothetical protein BACCOP_00018 [Bacteroides coprocola DSM 17136]
          Length = 203

 Score = 35.5 bits (81), Expect = 7.7,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 57/164 (34%), Gaps = 25/164 (15%)

Query: 25  TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
           T+  ++A C +   + Q+   V  +S          Y K V  L   N  +AY+Y N+  
Sbjct: 6   TLILTVACCLMAIAQTQAKDFVRPESSN--------YIKGVEALNAGNAEQAYQYLNEEI 57

Query: 85  RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY---VYYLVGMSY 141
              P  G A     M+    +  G  + A     E +   PE ++ +Y    YY  G  Y
Sbjct: 58  NQNPDNGYAH--CYMALVCNFY-GDMKLALYAANESVKLIPE-EDTEYRSFAYYTRGTLY 113

Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSP--YVKGARFYVT 183
                      +A  L  + +   +    +    Y   A  ++ 
Sbjct: 114 MNA--------QAYDLAEKDLDEAIRLTPSDAENYKTRAEIHMD 149


>gi|145512778|ref|XP_001442300.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124409653|emb|CAK74903.1| unnamed protein product [Paramecium tetraurelia]
          Length = 771

 Score = 35.5 bits (81), Expect = 7.7,   Method: Composition-based stats.
 Identities = 24/174 (13%), Positives = 63/174 (36%), Gaps = 26/174 (14%)

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
             ++++A    +  I + P++ ++   YY   ++   M R         +  LQ     +
Sbjct: 133 MNRFEEALQNYDSAIEKNPQNSDL---YYNKAITLDHMNR--------FEEALQNYDSAI 181

Query: 167 ERYTNSPYVKGARFYVTVGRNQL--AAKEVEIG--------RYYLKRGEYVAAIPRFQLV 216
           E+   +  +   +       N+   A +             RYY+ +   ++ + RF   
Sbjct: 182 EKNPENSEIYKEKAMTLYIMNRFEDALEHFNSALQINPEETRYYIGKANVLSEMNRFMEA 241

Query: 217 LANYSD--AEHAEEAMARLVEA---YVALALMDEAREVVSLIQERYPQGYWARY 265
           L N+    ++++E++     +A      + L +  +     I +   +  +  Y
Sbjct: 242 LRNFDLAISKNSEDSTYYFYKAMTLCKMIRLEEALQNYDLAISKNPEESQYYNY 295


>gi|119488086|ref|ZP_01621530.1| TPR repeat protein [Lyngbya sp. PCC 8106]
 gi|119455375|gb|EAW36514.1| TPR repeat protein [Lyngbya sp. PCC 8106]
          Length = 181

 Score = 35.5 bits (81), Expect = 7.7,   Method: Composition-based stats.
 Identities = 20/144 (13%), Positives = 44/144 (30%), Gaps = 25/144 (17%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGK 109
           +    +E YE   ++  ++ +S+A   F +    S     +           +  ++  +
Sbjct: 48  EKGTAQEYYELGCIYNDKKLYSQAIVVFQKALKISDQDQESQNLPLVYNALGYAYFAQEQ 107

Query: 110 YQQAASLGEEYITQYP----ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
           Y  A    +E +   P       N+ Y Y                  + T   L+   + 
Sbjct: 108 YDIAIRQYKEALKLAPEYVTAYNNLGYAYERK---------------KLTAQALEAYEQA 152

Query: 166 VERYTNSPYVKGARFYVTVGRNQL 189
           ++    +     AR      R +L
Sbjct: 153 LQGDPKN---VIARQRAESLRKRL 173


>gi|114705539|ref|ZP_01438442.1| hypothetical protein FP2506_13774 [Fulvimarina pelagi HTCC2506]
 gi|114538385|gb|EAU41506.1| hypothetical protein FP2506_13774 [Fulvimarina pelagi HTCC2506]
          Length = 269

 Score = 35.5 bits (81), Expect = 7.7,   Method: Composition-based stats.
 Identities = 17/127 (13%), Positives = 46/127 (36%), Gaps = 18/127 (14%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLG 117
           +  +A   +  +  +   +  +Q     P +A    R++        ++ G Y ++ S  
Sbjct: 152 LMRRATQAMGHKENATVIDLLDQVLVLEPDYAEAWNRRAT-----AHFANGDYGKSISDI 206

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           E+ + + P          L+G++   ++     D    K  L+    +++ Y      + 
Sbjct: 207 EQTLAREPRHWGA-----LMGLAL--ILERTEQD----KKALEVYGEVLDVYPALKSAQD 255

Query: 178 ARFYVTV 184
           A   ++ 
Sbjct: 256 AVGRLSE 262


>gi|94500773|ref|ZP_01307302.1| putative unknown membrane associated protein [Oceanobacter sp.
           RED65]
 gi|94427095|gb|EAT12076.1| putative unknown membrane associated protein [Oceanobacter sp.
           RED65]
          Length = 434

 Score = 35.5 bits (81), Expect = 7.7,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 8/60 (13%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCS--RDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLG 117
           ++A     E+ + +A EY       R   +     +++   M A+VQ++   Y  A S  
Sbjct: 56  DQARQLSDEKQYDEALEYLEDMKDIRRNSY----EQAMTWNMVAYVQFNRDNYDGAISAY 111


>gi|151946799|gb|ABS19046.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 180 [Homo sapiens]
          Length = 711

 Score = 35.5 bits (81), Expect = 7.7,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|320035567|gb|EFW17508.1| transcriptional corepressor Cyc8 [Coccidioides posadasii str.
           Silveira]
          Length = 580

 Score = 35.5 bits (81), Expect = 7.7,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 47/145 (32%), Gaps = 22/145 (15%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSA 107
             D    +  Y     ++ +  + KAYE + Q        P              + Y  
Sbjct: 297 AADTNDAQSWYLLGRCYMSQAKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQI 350

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
            +Y+ A       I   P    +  V+Y +G +  +   +   D       L   SR  E
Sbjct: 351 NQYRDALDAYSRAIRLNP---YISEVWYDLG-TLYESCNNQIAD------ALDAYSRAAE 400

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAK 192
              N+ ++   +  + + ++  AA 
Sbjct: 401 LDPNNVHI---KARLQLLQSGQAAN 422


>gi|283778754|ref|YP_003369509.1| hypothetical protein Psta_0964 [Pirellula staleyi DSM 6068]
 gi|283437207|gb|ADB15649.1| hypothetical protein Psta_0964 [Pirellula staleyi DSM 6068]
          Length = 832

 Score = 35.5 bits (81), Expect = 7.7,   Method: Composition-based stats.
 Identities = 4/23 (17%), Positives = 10/23 (43%)

Query: 106 SAGKYQQAASLGEEYITQYPESK 128
            A K+ +A +  + +   +P   
Sbjct: 90  RAEKFDEAIAEADRFRKTHPAHP 112


>gi|288935896|ref|YP_003439955.1| hypothetical protein Kvar_3037 [Klebsiella variicola At-22]
 gi|288890605|gb|ADC58923.1| TPR repeat-containing protein [Klebsiella variicola At-22]
          Length = 389

 Score = 35.5 bits (81), Expect = 7.7,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 59/195 (30%), Gaps = 54/195 (27%)

Query: 64  AVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
              ++    + +A + F Q     DF  + + +   +  A        +Q A  + E  +
Sbjct: 114 GRDYMAAGLYDRAEDMFKQLVDETDFRLSALQQLLQIYQA-----TSDWQSAIEVAERLV 168

Query: 122 TQ----YPESKNVDYVYYLVG-MSYA------QMIRDVPYDQRATKLMLQYMSRIVERYT 170
                 +             G ++        Q +     D       +  + +      
Sbjct: 169 KLGKEKH------------RGEIANFWCELALQQMAANDLD-----KAMALLKKGAAADR 211

Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
           NS                 A   + +GR ++++G+Y  A+   + V+    D E   E +
Sbjct: 212 NS-----------------ARVSIMMGRVWMEKGDYAKAVESLERVID--QDKELVGETL 252

Query: 231 ARLVEAYVALALMDE 245
             L   Y  L   +E
Sbjct: 253 EMLQTCYQQLGKAEE 267


>gi|229099585|ref|ZP_04230513.1| TPR domain protein [Bacillus cereus Rock3-29]
 gi|229105760|ref|ZP_04236389.1| TPR domain protein [Bacillus cereus Rock3-28]
 gi|229118649|ref|ZP_04248001.1| TPR domain protein [Bacillus cereus Rock1-3]
 gi|228664841|gb|EEL20331.1| TPR domain protein [Bacillus cereus Rock1-3]
 gi|228677649|gb|EEL31897.1| TPR domain protein [Bacillus cereus Rock3-28]
 gi|228683881|gb|EEL37831.1| TPR domain protein [Bacillus cereus Rock3-29]
          Length = 515

 Score = 35.5 bits (81), Expect = 7.7,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 76/224 (33%), Gaps = 53/224 (23%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           E+A  +++     +A       ++D+P  ++G         A   + +G   +A  L E 
Sbjct: 167 EEANRYIRNGQLEEAIATLEIVTKDYPEFWSGHN-----NLAIAHFQSGNVDKALKLTEM 221

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS------- 172
            + + P +        +  +    +     Y     K +     ++V  Y  S       
Sbjct: 222 ILEKNPGN--------IHALCNTLIFL---YSIGEHKQVEALAGQLVSVYPISFEHRLKL 270

Query: 173 -------PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA--------AIPRFQLVL 217
                   Y + A  +  V + Q    E ++  YY     Y A        A   +Q V+
Sbjct: 271 GTTLATIGYFEHAYKWFKVLKRQ--GYEGDVSFYYWF--AYSAYMVKNQQVAEKMWQHVV 326

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVV-SLIQERYPQG 260
             + D +          E + AL L DE + V+   +Q+ + Q 
Sbjct: 327 ELHPDKKG--------KEPWNALNLADEGQNVLFEELQKSFQQS 362



 Score = 35.1 bits (80), Expect = 9.6,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 80/213 (37%), Gaps = 33/213 (15%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y+K +   K Q    A +YF    R    +      L   A     AG+YQ++  +   +
Sbjct: 37  YKKGMRAYKGQKLQDAIKYF----RRAAQSEKEPFILCQLAIALSEAGEYQESNQI---F 89

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +     +  ++  YY +  +YA M       Q+A K   +Y+    E+     +V+    
Sbjct: 90  LKLARSNPELEQCYYFIANNYAYM----GLFQQAKKYADRYLEVAKEK----EFVEDTLE 141

Query: 181 YVTVGR-------------NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
            + +               + +  +E      Y++ G+   AI   ++V  +Y +     
Sbjct: 142 LLEIMEEEAMGAEEIEDEDDLIVMQEE--ANRYIRNGQLEEAIATLEIVTKDYPEFWSGH 199

Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
             +A    A+     +D+A ++  +I E+ P  
Sbjct: 200 NNLAI---AHFQSGNVDKALKLTEMILEKNPGN 229


>gi|242280675|ref|YP_002992804.1| hypothetical protein Desal_3214 [Desulfovibrio salexigens DSM 2638]
 gi|242123569|gb|ACS81265.1| hypothetical protein Desal_3214 [Desulfovibrio salexigens DSM 2638]
          Length = 181

 Score = 35.5 bits (81), Expect = 7.7,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 31/94 (32%), Gaps = 7/94 (7%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREV----YEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
           FL G  R+        S       +EV      +A +  +   F +A   + +  +  P 
Sbjct: 15  FLFGGFRKKEDREQAQSAAKPIAAKEVNLDTLAEANVAYENGRFEEAAAKYKEFIKTEPQ 74

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              ARK         Y A KY QA    E  I  
Sbjct: 75  NADARK---RLGHCLYKAEKYIQAKVEFERAIRI 105


>gi|33332422|gb|AAQ11419.1| lipoprotein Nlp1 [Yersinia enterocolitica]
          Length = 294

 Score = 35.5 bits (81), Expect = 7.7,   Method: Composition-based stats.
 Identities = 40/189 (21%), Positives = 57/189 (30%), Gaps = 34/189 (17%)

Query: 69  KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
           +  NF  AYE F+      P    AR   L      Y  G+   A    + +    P   
Sbjct: 108 QAGNFDAAYEAFDSVLELDPTYNYAR---LNRGIALYYGGRLPLAQDDLQAFYQDDPNDP 164

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
                 YLV         +   D +   + LQ      +RY  S   +            
Sbjct: 165 FRSLWLYLV---------EREIDPKTAAVALQ------QRYEKSDRGQWG---------- 199

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQ-LVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
                  I  +YL      A + R +     N S AEH  E    L + Y++L   D A 
Sbjct: 200 -----WNIVEFYLGTISEKALMERLKADATDNTSLAEHLSETDFYLGKHYLSLGDKDTAS 254

Query: 248 EVVSLIQER 256
            +  L    
Sbjct: 255 ALFKLTVAN 263


>gi|317477616|ref|ZP_07936834.1| tetratricopeptide [Bacteroides eggerthii 1_2_48FAA]
 gi|316906221|gb|EFV27957.1| tetratricopeptide [Bacteroides eggerthii 1_2_48FAA]
          Length = 283

 Score = 35.5 bits (81), Expect = 7.8,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 28/68 (41%), Gaps = 3/68 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +  +A ++++    + A   ++             ++LLM A++     +Y+ A +  E 
Sbjct: 97  LLNRAAIYMELGRNNLAQADYSLVLDL---EKNNEEALLMRAYIYMQQREYKMAKADYER 153

Query: 120 YITQYPES 127
            +   P S
Sbjct: 154 LLKVNPAS 161


>gi|301063415|ref|ZP_07203951.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
 gi|300442488|gb|EFK06717.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
          Length = 332

 Score = 35.5 bits (81), Expect = 7.8,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 9/58 (15%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS----AFVQYSAGKYQQAASLG 117
           A + ++ Q++ KA E +     + P +       LM      F+   AGK ++A S  
Sbjct: 248 AEILMERQDWDKAAEQYEILIENAPPSE-----RLMLYKNSGFLYAKAGKLEKAVSAY 300


>gi|238763106|ref|ZP_04624072.1| hypothetical protein ykris0001_40450 [Yersinia kristensenii ATCC
           33638]
 gi|238698605|gb|EEP91356.1| hypothetical protein ykris0001_40450 [Yersinia kristensenii ATCC
           33638]
          Length = 389

 Score = 35.5 bits (81), Expect = 7.8,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 24/70 (34%), Gaps = 2/70 (2%)

Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
                        + A   +  GR YL +GEY   +   + VL    D E   EA+  L 
Sbjct: 199 AMSLLKKAASADKRCARVSIMQGRVYLAKGEYAKGVEALEQVLE--QDKEVVSEALPMLS 256

Query: 235 EAYVALALMD 244
           E Y  L    
Sbjct: 257 ECYQHLQQPQ 266


>gi|226229171|ref|YP_002763277.1| hypothetical membrane protein [Gemmatimonas aurantiaca T-27]
 gi|226092362|dbj|BAH40807.1| hypothetical membrane protein [Gemmatimonas aurantiaca T-27]
          Length = 998

 Score = 35.5 bits (81), Expect = 7.8,   Method: Composition-based stats.
 Identities = 14/126 (11%), Positives = 40/126 (31%), Gaps = 16/126 (12%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFN--------QCSRDFPFAGVARKSLLMSAFVQ 104
           D    + +   A   L      +A                   P    A +++ M +   
Sbjct: 591 DQSDPQALLFAAEARLNLGLPGEAIPLLQRALAIDSAALGAVRPEHCYACEAVQMLSRAY 650

Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
                   A ++ + ++ + P+S    +       SY++++        A++ + + ++ 
Sbjct: 651 LDQDNPDAAIAIIKRWVDRQPQSTEA-WA------SYSRVLDFTGRLPEASRALDRALA- 702

Query: 165 IVERYT 170
           +   Y 
Sbjct: 703 LNPAYP 708


>gi|224536423|ref|ZP_03676962.1| hypothetical protein BACCELL_01297 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224521978|gb|EEF91083.1| hypothetical protein BACCELL_01297 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 673

 Score = 35.5 bits (81), Expect = 7.8,   Method: Composition-based stats.
 Identities = 18/118 (15%), Positives = 37/118 (31%), Gaps = 18/118 (15%)

Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
           Y YY+    Y   I D     +  +   +               K  +  V      L  
Sbjct: 239 YYYYVRAAQYYLFIEDYSQSWKNLQKAKELFLS----------KKEVQKNVEEYYEILQ- 287

Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANY-SDAEHAEEAMARLVEAYVALALMDEARE 248
                 +YY K  ++  A+     ++A +  +  +  EAM +    Y  +    ++ +
Sbjct: 288 ------KYYTKTKQFEKALEVLDYIIATFNPNERYKVEAMRKRASIYYKMGDKSKSAQ 339


>gi|206890955|ref|YP_002249256.1| TPR domain protein, putative [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|206742893|gb|ACI21950.1| TPR domain protein, putative [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 542

 Score = 35.5 bits (81), Expect = 7.8,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 64/200 (32%), Gaps = 42/200 (21%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL----LMSAFVQYSAGKYQQAASLGEE 119
             L+L    + KA E F +  +       +   +    L   ++      ++ A    + 
Sbjct: 121 GNLYLISGMYDKAIETFKKILK-----EDSENIMALHFLGIIYI--EKKDFKSARESFKT 173

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            +   P+ +                +  V       K    Y  + +E    + +   AR
Sbjct: 174 ILKLNPDYEPA-----------YTNLGAVEELAGNLKDAELYFKKALELNPENLF---AR 219

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
             +                 YL +  Y  AI   + +    S++E   E +A L   Y+ 
Sbjct: 220 ERLINL--------------YLSQKSYKEAIKELETLKEQKSESEQIHEKLALL---YLQ 262

Query: 240 LALMDEAREVVSLIQERYPQ 259
           +   D+A E +  +  ++P+
Sbjct: 263 IKQYDKATEELEYLLSKHPK 282


>gi|254409688|ref|ZP_05023469.1| SLEI family [Microcoleus chthonoplastes PCC 7420]
 gi|196183685|gb|EDX78668.1| SLEI family [Microcoleus chthonoplastes PCC 7420]
          Length = 2060

 Score = 35.5 bits (81), Expect = 7.8,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 70/223 (31%), Gaps = 44/223 (19%)

Query: 41   QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM- 99
            Q SR++Y           + Y  A  +     + KA E   +         +A +  L  
Sbjct: 1380 QQSRELYEQLYKHKDVANQWYRLADCYRNWGKYEKAIECEQK--------DLAIRQQLDD 1431

Query: 100  ---SAFVQYSA-------GKYQQAASLGEEYITQYPE---SKNVDYVYYLVGMSYAQMIR 146
                A   Y         GKY+ A +  ++ +  Y +    K+V   +Y +   Y     
Sbjct: 1432 QPRIALAYYQLGRIYQDWGKYEDAIAHHQQSLELYEQLDKQKDVADSWYWLAACY----- 1486

Query: 147  DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
                D    +  ++                 A       + ++A+   + GR Y   G+Y
Sbjct: 1487 ---RDWGQYEKAIE-----------CEQKDLAIRQQLNDQPRIASAYYQFGRIYQDWGKY 1532

Query: 207  VAAIPRFQLVLANYSDA---EHAEEAMARLVEAYVALALMDEA 246
              AI  +Q  L  Y      +   ++   L   Y      ++A
Sbjct: 1533 EDAIAHYQQSLELYEQLDKRKDVADSWYWLAACYRDWGQYEKA 1575


>gi|223938131|ref|ZP_03630028.1| sulfotransferase [bacterium Ellin514]
 gi|223893175|gb|EEF59639.1| sulfotransferase [bacterium Ellin514]
          Length = 518

 Score = 35.5 bits (81), Expect = 7.8,   Method: Composition-based stats.
 Identities = 11/90 (12%), Positives = 29/90 (32%), Gaps = 10/90 (11%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
              +      +L+ +++  A +YF Q       P     R   +          +   A 
Sbjct: 82  PDALLAVGHYWLEVRHYEAAIKYFQQILKESRIPVLTFVRLGEIFI-----RMRRLDDAV 136

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
           ++ E  +  Y ++++      L    + + 
Sbjct: 137 AIAERALRLYSQNES---ALLLRAKVHREQ 163


>gi|166032805|ref|ZP_02235634.1| hypothetical protein DORFOR_02520 [Dorea formicigenerans ATCC
           27755]
 gi|166027162|gb|EDR45919.1| hypothetical protein DORFOR_02520 [Dorea formicigenerans ATCC
           27755]
          Length = 174

 Score = 35.5 bits (81), Expect = 7.8,   Method: Composition-based stats.
 Identities = 11/69 (15%), Positives = 26/69 (37%), Gaps = 1/69 (1%)

Query: 64  AVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           AV  ++ +N+  A  Y+ +          + ++              +  A +  E+Y+T
Sbjct: 97  AVCKMQTENYEDAISYYEKALDHSDCSDDMKQEIQFNVIVCYEKLEDWDNAKAKLEDYVT 156

Query: 123 QYPESKNVD 131
            YP+ +   
Sbjct: 157 AYPDDEKAA 165


>gi|94967839|ref|YP_589887.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94549889|gb|ABF39813.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
           Ellin345]
          Length = 486

 Score = 35.5 bits (81), Expect = 7.8,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 32/87 (36%), Gaps = 11/87 (12%)

Query: 48  LDSVTDVRYQRE--VYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAF 102
           L+ VT    + +  ++      +++QN+  A  +  +      ++P       +L   A+
Sbjct: 133 LNDVTSAYPEDKFLLFLAGRWMVQQQNYEGAQRFLERAVTIDPNYP------AALNELAY 186

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKN 129
                  + +A    ++Y    P   N
Sbjct: 187 AYAGNRIFDKAFEALDKYAKLLPGEPN 213


>gi|254281218|ref|NP_083706.1| tetratricopeptide repeat protein 23-like [Mus musculus]
 gi|189041129|sp|A6H6E9|TT23L_MOUSE RecName: Full=Tetratricopeptide repeat protein 23-like
 gi|148671349|gb|EDL03296.1| mCG18320, isoform CRA_a [Mus musculus]
 gi|148877630|gb|AAI45853.1| Ttc23l protein [Mus musculus]
          Length = 458

 Score = 35.5 bits (81), Expect = 7.8,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 48/129 (37%), Gaps = 23/129 (17%)

Query: 2   SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY 61
              L  A+       +++   AL  F   A+C           DV LD   +      +Y
Sbjct: 207 EKDLTIALGRASLAMHRM-NLALAYFEK-AIC-----------DVILDKGHNTSELISLY 253

Query: 62  EK-AVLFLKEQNFSKAYEYFNQCSRDF--PFAGVARK-----SLLMSAFVQYSAGKYQQA 113
           E+ A +    +N  +A +Y  Q        F+ V+ +     +LL  A+    A +Y+ A
Sbjct: 254 EEIAQIEQLRKNHKQAIQYLQQAYSICVSSFSEVSPQTAEASALLAKAYAMSGASEYRDA 313

Query: 114 ASLGEEYIT 122
             +   +I 
Sbjct: 314 VEIY--FIR 320


>gi|268573518|ref|XP_002641736.1| Hypothetical protein CBG10075 [Caenorhabditis briggsae]
          Length = 1143

 Score = 35.5 bits (81), Expect = 7.8,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 33/77 (42%), Gaps = 1/77 (1%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
           + I   +++R ++++A+  +   +  +   E+    +  L +AY    ++ EA+E +   
Sbjct: 714 MNIAHVFMEREQWMSAVQMYSSAMKKFRK-ENDAMLLHYLAKAYYRANMLSEAKEALERA 772

Query: 254 QERYPQGYWARYVETLV 270
                     ++   +V
Sbjct: 773 MLDQLDNTQLKFNYAIV 789


>gi|311107446|ref|YP_003980299.1| MarR family regulatory helix-turn-helix protein 14 [Achromobacter
           xylosoxidans A8]
 gi|310762135|gb|ADP17584.1| bacterial regulatory helix-turn-helix protein, MarR family protein
           14 [Achromobacter xylosoxidans A8]
          Length = 170

 Score = 35.5 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 33/86 (38%), Gaps = 10/86 (11%)

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV-----LANYSDAEHAEE 228
           Y       + V ++    KEV     Y       AAI R+  V     +  + D+  A+E
Sbjct: 89  YSLKKLERLGVVQSAKTGKEVI----YTATDAGAAAIQRYAEVREQCLVKPFIDSPAADE 144

Query: 229 AMARLVEAYVAL-ALMDEAREVVSLI 253
           A  +L     AL  L D+A    + +
Sbjct: 145 ASHQLANTLRALSGLYDQAARAATSL 170


>gi|256075180|ref|XP_002573898.1| tetratricopeptide repeat protein 10 tpr10 [Schistosoma mansoni]
 gi|238659089|emb|CAZ30131.1| tetratricopeptide repeat protein 10, tpr10, putative [Schistosoma
           mansoni]
          Length = 704

 Score = 35.5 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 72/228 (31%), Gaps = 51/228 (22%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS----LLMSAFVQYSAG 108
           D R    +Y   ++  + + + +A E F +      ++ +   +     LM  +     G
Sbjct: 375 DTRCVEALYNLGLVCKQLERYEEALEAFFKL-----YSVLRNSAPVVYQLMDIYE--KLG 427

Query: 109 KYQQAASLGEEYITQY---PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
              QA       +  +   P    +            Q + D    +        Y    
Sbjct: 428 DSTQAQEWA---MQLHGMVPTDPFL-----------LQRLGDSYEQEGDKSQAFSYYYDS 473

Query: 166 VERYT--------------NSPYVKGARFYVTVGR----NQLAAKEVEIGRYYLKRGEYV 207
            + Y                S + + A  Y         NQ+   ++ I   + + G Y 
Sbjct: 474 FKYYPCNFDVIEWLGAYYIESQFCEKAIAYFERASLMQPNQI-KWQLMIASCHRRSGNYQ 532

Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
            A+  ++++   + +     E +  LV     + L  EA++ ++ ++ 
Sbjct: 533 QALETYRIIHRRFPE---NIECLQFLVRLSSDMDLP-EAQDYITKLKR 576


>gi|238014474|gb|ACR38272.1| unknown [Zea mays]
          Length = 489

 Score = 35.5 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 13/89 (14%), Positives = 31/89 (34%), Gaps = 3/89 (3%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
           +    VG + ++ ++          +   +Y    L +    F +A E + +     P  
Sbjct: 67  SALHAVGEDDRAIQEFQTAIDLKPGHVDALYNLGGLNMDAGRFVRAAEMYTRVLSIRP-N 125

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEE 119
               ++ L  A      G+ ++A    +E
Sbjct: 126 HW--RAQLNKAVALLGQGESEEAKKALKE 152


>gi|242281242|ref|YP_002993371.1| hypothetical protein Desal_3787 [Desulfovibrio salexigens DSM 2638]
 gi|242124136|gb|ACS81832.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio salexigens
           DSM 2638]
          Length = 262

 Score = 35.5 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 21/181 (11%), Positives = 53/181 (29%), Gaps = 34/181 (18%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL-------LMSAFVQYSAGKYQQAASL 116
           A ++++   + +A E   +          + ++         M A        Y  A   
Sbjct: 109 AEMYIRTGQYKEAVEALEKSL------EYSEQTQEQLDSKRTMLAETFRKLRNYDLAIYT 162

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
             + I +  ++            +  +M   +   Q A +     + ++++    S    
Sbjct: 163 YND-IAKSTDNPRT------KARAIFEMAHTLTLIQ-AWERAESELEKLLKMEGISE--- 211

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
                     +  A     +   Y  R EY  A+   + ++  Y +       +  L + 
Sbjct: 212 ----------DIHAEAVFMLADIYEDRHEYKRAVELLEGIVDTYPNPYAVRYKLDYLKKR 261

Query: 237 Y 237
           Y
Sbjct: 262 Y 262


>gi|254494885|ref|ZP_01052247.2| conserved hypothetical protein [Polaribacter sp. MED152]
 gi|213690467|gb|EAQ41675.2| conserved hypothetical protein [Polaribacter sp. MED152]
          Length = 687

 Score = 35.5 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 79/227 (34%), Gaps = 46/227 (20%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++   +L+   + KA  +F Q   DFP     + + L         G   +A  +  E +
Sbjct: 24  KEGFTYLETGKYKKAEVFFKQILEDFPTN---KTAKLCYGRAVGLTGNATKATRIFTELL 80

Query: 122 TQYPESKNVD--YV-------YYLVGMSYAQMIRDVPYDQ---------------RATKL 157
            +YP    V   Y         +    SY + + D   DQ               +  + 
Sbjct: 81  EKYPNDFEVKLNYAESLLWGSQFQKAKSYYKNLVDED-DQSFSALLGYANTLSNLKEFEQ 139

Query: 158 MLQYMSRIVERYTNSPYVKGARFYVT--VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
            + Y+ + ++   N+P    ++ Y+   +   ++  KE +                  ++
Sbjct: 140 AIVYVDKALKVSPNNPNALVSKKYMRLGLANTKVTDKEYDEAE---------------RI 184

Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
           +  N+S  ++ +E +  L   Y+     ++A+     +    P+  +
Sbjct: 185 LNENFSSFKNDKETLLNLANLYLISNQPEKAKATYEQLGLD-PKNKF 230


>gi|254465948|ref|ZP_05079359.1| hypothetical protein RBY4I_2556 [Rhodobacterales bacterium Y4I]
 gi|206686856|gb|EDZ47338.1| hypothetical protein RBY4I_2556 [Rhodobacterales bacterium Y4I]
          Length = 176

 Score = 35.5 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 23/76 (30%), Gaps = 3/76 (3%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
                 +E+  + +      +F  A E F+Q     P    A       AFV Y    + 
Sbjct: 48  APDERAQEILNRGMTRRSSFDFLGALEDFDQLIAYCP--EYAE-GYNQRAFVHYLRRDFA 104

Query: 112 QAASLGEEYITQYPES 127
            A    +  +   P  
Sbjct: 105 AALRDLDRALELSPRH 120


>gi|196229166|ref|ZP_03128031.1| hypothetical protein CfE428DRAFT_1196 [Chthoniobacter flavus
            Ellin428]
 gi|196226398|gb|EDY20903.1| hypothetical protein CfE428DRAFT_1196 [Chthoniobacter flavus
            Ellin428]
          Length = 1179

 Score = 35.5 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 51/175 (29%), Gaps = 37/175 (21%)

Query: 105  YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD------------- 151
            Y +  Y Q     + ++ +YP+SK  +    L   +      +V  D             
Sbjct: 985  YRSRDYPQLEKATQAFLEKYPKSKKREAALLLHARATYHASEEVALDKMVTWPRAARWEG 1044

Query: 152  ----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
                          K +L       + + +  Y    R Y                    
Sbjct: 1045 GSEPTYTQQEPFDAKRVLATFDAYDQAFPHGRYAADIRSYRAAVE--------------F 1090

Query: 202  KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
            +   +  A+      L  + +     +A  RL + +  LA      +V+++I+E 
Sbjct: 1091 RLDHWKPALELTLAQLDGHDNPALNHQAADRLGDIFDQLADEKSRMDVLAVIKEN 1145


>gi|194335407|ref|YP_002017201.1| TPR repeat-containing protein [Pelodictyon phaeoclathratiforme
           BU-1]
 gi|194307884|gb|ACF42584.1| TPR repeat-containing protein [Pelodictyon phaeoclathratiforme
           BU-1]
          Length = 793

 Score = 35.5 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 39/93 (41%), Gaps = 8/93 (8%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF------PFAGVA 93
            +S +D+  +   D +   E+++K    +K++++  A ++F+   + +        + + 
Sbjct: 451 TESKKDI--NEGVDRKAVIELFKKGCQLVKDKDYETAIQFFDHIIKRYKDRTEVEISSLV 508

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
             +L     + +   +  +A    EE I  Y  
Sbjct: 509 VSALFNKGVILHKLARENEAIKTYEELIVTYSN 541


>gi|149467149|ref|XP_001520967.1| PREDICTED: similar to cell division cycle 27, partial
           [Ornithorhynchus anatinus]
          Length = 385

 Score = 35.5 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 24/76 (31%), Gaps = 20/76 (26%)

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128
           A ++F +          A +     A+     G       +  +A +     I   P   
Sbjct: 196 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 245

Query: 129 NVDYVYYLVGMSYAQM 144
           N    +Y +GM Y + 
Sbjct: 246 N---AWYGLGMIYYKQ 258


>gi|50285659|ref|XP_445258.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524562|emb|CAG58164.1| unnamed protein product [Candida glabrata]
          Length = 769

 Score = 35.5 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 59/200 (29%), Gaps = 46/200 (23%)

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYIT 122
           +++   A E F +          A K     A+     G        +  A     + I 
Sbjct: 564 KKDHEDAIEAFEK----------ATKIDPKFAYAYTLQGHECSSNDSFDAAKKCFRKAIA 613

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV----KGA 178
             P   N    YY +G+   ++              L Y  +  + Y  +  +      A
Sbjct: 614 CDPRHYN---AYYGMGIYSMKL--------GHYDEALLYFEKARQIYPINAVLICCCGVA 662

Query: 179 RFYVTVGRNQLAAKEV--------EIGRYYLKRGEYVAAIPRFQLVLANYSD----AEHA 226
              +      L   E+         + R+  KR   + A+ R+ L L ++ +        
Sbjct: 663 LEKLEYQDKALEYYELACTLQPNSNLARF--KRANLLYAMGRYNLALQSFEELSKLTPEE 720

Query: 227 EEAMARLVEAYVALALMDEA 246
                 L + Y  +   +EA
Sbjct: 721 PTVHFVLGQLYQIMGRKNEA 740


>gi|298207011|ref|YP_003715190.1| BatE, TRP domain containing protein [Croceibacter atlanticus
           HTCC2559]
 gi|83849645|gb|EAP87513.1| BatE, TRP domain containing protein [Croceibacter atlanticus
           HTCC2559]
          Length = 249

 Score = 35.5 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 9/80 (11%), Positives = 23/80 (28%), Gaps = 7/80 (8%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
             ++++A      +N+ +A   +    +D      +           Y       +    
Sbjct: 21  ESLFKEANQAYANENYEEAISKYQSILKD---GYESTSVYYNLGNSHYKLNNVGPSVYYF 77

Query: 118 EEYITQYPESKNV----DYV 133
           E+ +   P   +V     Y 
Sbjct: 78  EKALKLDPNDADVTNNLAYA 97


>gi|67921469|ref|ZP_00514987.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
 gi|67856581|gb|EAM51822.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
          Length = 248

 Score = 35.5 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 25/219 (11%), Positives = 64/219 (29%), Gaps = 47/219 (21%)

Query: 12  FEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ 71
              +  +       +   + +   +G    SS  +   ++T      E+ ++ +   +  
Sbjct: 15  SSVYTLKTRNSLFYLCSLLLISLTMGCNPSSSVPIKTSALTVDTV--EMVQQGIEKSRRG 72

Query: 72  NFSKAYEYFNQCSRDFPFAGVA--------------RKS------------LLMSAFV-- 103
           N+  A + FNQ   + P    A               ++             ++ A+V  
Sbjct: 73  NYQGALKDFNQVIAENPQDIHAYFNRGYAHSSLGQFEQALADFTIALKLDPQMVEAYVNR 132

Query: 104 ---QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
                  G+ ++A +  E+ +   P      +    +G+++            +  L   
Sbjct: 133 GNVYLQLGEDEKAIADYEKALEINPND---AFAQNNLGLAHLNS--------GSPGLAKI 181

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
             +  V       Y +          + L  +E  I  +
Sbjct: 182 DFTEAVMIDP--LYGEAYYNRGLALLD-LGERENAIADF 217


>gi|326510261|dbj|BAJ87347.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 842

 Score = 35.5 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 13/89 (14%), Positives = 30/89 (33%), Gaps = 3/89 (3%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
           +    VG + ++  +          +   +Y    L +    F +A E + +     P  
Sbjct: 420 SALHAVGDDDRAVEEFQKAIDLKPGHVDALYNLGGLNMDAGRFVRAAEMYTRVLSIRP-N 478

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEE 119
               ++ L  A      G+ ++A    +E
Sbjct: 479 HW--RAQLNKAVALLGQGESEEAKKALKE 505


>gi|325842043|ref|ZP_08167580.1| hypothetical protein HMPREF9402_0518 [Turicibacter sp. HGF1]
 gi|325489765|gb|EGC92121.1| hypothetical protein HMPREF9402_0518 [Turicibacter sp. HGF1]
          Length = 476

 Score = 35.5 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 12/85 (14%), Positives = 33/85 (38%), Gaps = 10/85 (11%)

Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
           Y+ G++  Q        Q   +  ++   ++   + +  Y + A+  +      +  + +
Sbjct: 141 YIKGVNLQQ--------QGFIEEAIEAYGQV--MFNDQSYYELAKGRIMQCVQLIKEQYL 190

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLAN 219
                + ++  YV AI R   ++ N
Sbjct: 191 AEANEFYEQKNYVEAIKRLNYLIDN 215


>gi|315185616|gb|EFU19384.1| hypothetical protein SpithDRAFT_1907 [Spirochaeta thermophila DSM
           6578]
          Length = 226

 Score = 35.5 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 43/133 (32%), Gaps = 27/133 (20%)

Query: 133 VYYLVG-MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
             YL+G +++          Q        +  R+ + +  S     A       R  L  
Sbjct: 105 AMYLLGHLAFW---------QEDWDDASIWFDRLAKEFPRSYLAAVALLDAAAARENL-- 153

Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLAN-YSDAEHAEEAMARLVEAYVALALMDEAREVV 250
                       G+   A  R++ V+   +  +     A+  L     +    + AR++ 
Sbjct: 154 ------------GDTSGATTRYEKVIEAGF--SVLKPRALFSLGRLKESSGDREGARQIY 199

Query: 251 SLIQERYPQGYWA 263
           + + E YP   W+
Sbjct: 200 TQLLEDYPSSQWS 212


>gi|300865309|ref|ZP_07110121.1| hypothetical protein OSCI_1620002 [Oscillatoria sp. PCC 6506]
 gi|300336676|emb|CBN55271.1| hypothetical protein OSCI_1620002 [Oscillatoria sp. PCC 6506]
          Length = 219

 Score = 35.5 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 27/81 (33%), Gaps = 3/81 (3%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           +     +VT  +  R  Y + V  L +Q+F  A E FN      P +  A          
Sbjct: 37  KANPQTTVTSNKTDRSFYLQGVKKLAKQDFGGAIENFNMALNINPDSAYAYN---DRGVA 93

Query: 104 QYSAGKYQQAASLGEEYITQY 124
           +Y+ G    A       I   
Sbjct: 94  RYNLGDKYSALQDLNMAIKLN 114


>gi|301115780|ref|XP_002905619.1| anaphase-promoting complex subunit, putative [Phytophthora
           infestans T30-4]
 gi|262110408|gb|EEY68460.1| anaphase-promoting complex subunit, putative [Phytophthora
           infestans T30-4]
          Length = 631

 Score = 35.5 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 30/87 (34%), Gaps = 8/87 (9%)

Query: 35  LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV-- 92
           L       S +  +   T   +  +++ +A + L +Q    A E        FP +    
Sbjct: 260 LAAHSPFLSSEEEVILATSCSWMFQLF-QAHILLDQQQNDAARELLTSLEDQFPQSTYLL 318

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEE 119
           A+++L       Y    + Q+    E 
Sbjct: 319 AQQAL-----TSYHIRDFDQSQEQFER 340


>gi|229017501|ref|ZP_04174402.1| hypothetical protein bcere0030_20540 [Bacillus cereus AH1273]
 gi|228743825|gb|EEL93926.1| hypothetical protein bcere0030_20540 [Bacillus cereus AH1273]
          Length = 1400

 Score = 35.5 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 29/69 (42%), Gaps = 11/69 (15%)

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM--ARLVEAYVALALMDEAREVVSL 252
             G  Y   G+Y  A+ R+   +           A+   R+ E Y+AL  + EA++   +
Sbjct: 883 YAGILYESIGQYDQAMKRYNKAIE------QKRTALPYYRIGETYMALGQLTEAKQAYEI 936

Query: 253 ---IQERYP 258
              + E +P
Sbjct: 937 CLELDENFP 945


>gi|255037553|ref|YP_003088174.1| hypothetical protein Dfer_3805 [Dyadobacter fermentans DSM 18053]
 gi|254950309|gb|ACT95009.1| Tetratricopeptide domain protein [Dyadobacter fermentans DSM 18053]
          Length = 595

 Score = 35.5 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 45/135 (33%), Gaps = 13/135 (9%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
               + Y    L L +    +A +   Q  + +    +A + L ++A         QQA 
Sbjct: 466 ETAMKAYSSVELQLFQNKKFEAIDTLKQLYKRYESHSLADEILWLTAKTYIKLDSNQQAM 525

Query: 115 SLGEEYITQYP--ESK-NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           +  +     Y         D   +   M+     +    DQ      ++    ++E+Y  
Sbjct: 526 TDLK---LLYSKFGHDLYGDDALF--AMAKLYQEKLNDKDQ-----AMKMYQELMEKYPG 575

Query: 172 SPYVKGARFYVTVGR 186
           S +V  +R    + R
Sbjct: 576 SIFVAESRKRFRILR 590


>gi|124024559|ref|YP_001018866.1| hypothetical protein P9303_28711 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964845|gb|ABM79601.1| Hypothetical protein P9303_28711 [Prochlorococcus marinus str. MIT
           9303]
          Length = 334

 Score = 35.5 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 62/209 (29%), Gaps = 45/209 (21%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D +Y R    +       +++  A   + +     P    A ++     F + +   YQ 
Sbjct: 76  DPQYARAYGNRGFAKSNLKDYQGAITDYKKAIEIDP--QYA-RAYFNRGFAKSNLKDYQG 132

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A +     I   P+   +   Y+  G++          D +  +  +   ++ +E     
Sbjct: 133 AIADFTRAIEINPQ---LADAYFNRGLAKD--------DLKDYQGAIADYTKAIEINP-- 179

Query: 173 PYVKG------ARFYVTVGRNQLA--AKEVEI-----GRYYLKRGE------YVAAIPRF 213
            Y         A+      +  +A   K +EI       YY +         Y AAI  +
Sbjct: 180 QYAAAYNNRGLAKVKSGDTQGAIADWGKAIEINPQYAAAYYNRGRAKYDLKSYQAAIADY 239

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALAL 242
              +               L  AY    L
Sbjct: 240 NKAIEINPQ----------LAIAYYNRGL 258


>gi|194366583|ref|YP_002029193.1| hypothetical protein Smal_2810 [Stenotrophomonas maltophilia
           R551-3]
 gi|194349387|gb|ACF52510.1| conserved hypothetical protein [Stenotrophomonas maltophilia
           R551-3]
          Length = 344

 Score = 35.5 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 32/73 (43%), Gaps = 7/73 (9%)

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP---YD 151
           ++L   A+  +  G    AA L  E +   P   ++   +Y+ G+++ + +RD P    D
Sbjct: 38  QALEARAYAAFDEGDLPDAADLFGELVELTPGIPHL---HYMRGLAH-KYLRDWPASLRD 93

Query: 152 QRATKLMLQYMSR 164
              ++ +     +
Sbjct: 94  NLCSERLRDAFDQ 106


>gi|114765246|ref|ZP_01444378.1| hypothetical protein 1100011001307_R2601_00415 [Pelagibaca
           bermudensis HTCC2601]
 gi|114542381|gb|EAU45409.1| hypothetical protein R2601_00415 [Roseovarius sp. HTCC2601]
          Length = 618

 Score = 35.5 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 14/105 (13%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL----AAKEVEIGRYYLKRGEYVA 208
                 ++   RI+ R+  SP    AR    V  ++L    A++E+ +GR Y+   E +A
Sbjct: 324 EDAASAVETYGRIIVRHPESPEALEARQKARVLIDELYRKGASREISLGR-YMANHERIA 382

Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
              RF    A++       EA   L + ++       A    + I
Sbjct: 383 PFFRFN---ADF------AEAAELLADTFLKAGATTMAAREYATI 418


>gi|103488644|ref|YP_618205.1| tetratricopeptide TPR_2 [Sphingopyxis alaskensis RB2256]
 gi|98978721|gb|ABF54872.1| Tetratricopeptide TPR_2 [Sphingopyxis alaskensis RB2256]
          Length = 604

 Score = 35.5 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 21/137 (15%), Positives = 44/137 (32%), Gaps = 25/137 (18%)

Query: 71  QNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
             +  A +   +     P F      +    A V Y   +Y +A    +  +T  P++  
Sbjct: 119 GRYGDAEKLLTRALELAPGFGA----ARANLATVLYKQNRYAEAVETLDAVLTDDPDNPA 174

Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV--GRN 187
                 L   +  ++              +   + +VER+        AR +++      
Sbjct: 175 HA---NLKAAALGRI--------GGYDEAIALYAELVERFPGH-----ARLWMSYGHMLK 218

Query: 188 QLAAKEVEIGRYYLKRG 204
            +  +E  I  Y  +RG
Sbjct: 219 TVGRQEDSIAAY--RRG 233


>gi|71022553|ref|XP_761506.1| hypothetical protein UM05359.1 [Ustilago maydis 521]
 gi|46101375|gb|EAK86608.1| hypothetical protein UM05359.1 [Ustilago maydis 521]
          Length = 750

 Score = 35.5 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 9/70 (12%), Positives = 28/70 (40%), Gaps = 7/70 (10%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGK 109
            D+    ++  +    +  +++  A E + +     P +    + ++   +AF Q   G+
Sbjct: 100 EDLAKAEQLKAEGNKAMSAKDYGAAIEAYGKAIELNPNSPVYFSNRA---AAFSQ--IGQ 154

Query: 110 YQQAASLGEE 119
           +  A    ++
Sbjct: 155 HDSAIDDAKQ 164


>gi|332534424|ref|ZP_08410264.1| hypothetical protein PH505_bh00310 [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332036158|gb|EGI72633.1| hypothetical protein PH505_bh00310 [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 367

 Score = 35.5 bits (81), Expect = 8.0,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 15/49 (30%), Gaps = 5/49 (10%)

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNV-DYVYYLVGMSYAQMIRD 147
            A+  Y  G    A +  +      P   N+   V  L  M      +D
Sbjct: 201 LAYAYYQQGDLISAQATLDRM----PNQHNLKSQVQTLQAMINKAQSQD 245


>gi|330875375|gb|EGH09524.1| TPR domain-containing protein [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 364

 Score = 35.5 bits (81), Expect = 8.0,   Method: Composition-based stats.
 Identities = 8/78 (10%), Positives = 27/78 (34%), Gaps = 11/78 (14%)

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           ++ L  A +    G  + A +  +   +  P +           +++ +++      +  
Sbjct: 189 QNQLQLARLYLQTGDLEPAVAALQRATSLDPGNIEA-------ALAHIELLDR----KGQ 237

Query: 155 TKLMLQYMSRIVERYTNS 172
            +      + ++ER   S
Sbjct: 238 AEQARSLFAGLLERNPGS 255


>gi|331646284|ref|ZP_08347387.1| biofilm PGA synthesis protein PgaA [Escherichia coli M605]
 gi|331045036|gb|EGI17163.1| biofilm PGA synthesis protein PgaA [Escherichia coli M605]
          Length = 807

 Score = 35.5 bits (81), Expect = 8.0,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 76/229 (33%), Gaps = 41/229 (17%)

Query: 55  RYQREVYEKAV--LFLKEQNFSKAYEYFNQCSRDFPFAGVARKS-LLMSAFVQYSAGKYQ 111
             Q + Y++          ++  A     Q     P      K+ LL  A++    G+YQ
Sbjct: 128 EPQNKDYQRGQILTLADAGHYDTALFKLKQLKSGAP-----DKANLLAEAYIYKLTGRYQ 182

Query: 112 QAASLGEEYI------TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
                  E +       QYP     +YV  L     A  I D          +   + R+
Sbjct: 183 DELRAMTESLPENASKQQYPT----EYVLALRNNQLAAAIDDANLTPDIRADIHAELVRL 238

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKE-VEI---------GRYYLKRGEYVAAI---PR 212
               T S           +    LA    +EI          +Y   + +++ A+    R
Sbjct: 239 SFMPTRSE-----NERYAIADRALAQYAALEILWHDNPDRTAQYQRIQVDHLGALLTRDR 293

Query: 213 FQLVLANYSDAEHAEE-----AMARLVEAYVALALMDEAREVVSLIQER 256
           ++ V+++Y   +   +     A+  +  AY+      +A+ +++ +   
Sbjct: 294 YRDVISHYQRLKKMGQIIPPWALYWVASAYLKDQQPKKAQSIMTELFYN 342


>gi|294784228|ref|ZP_06749523.1| tetratricopeptide repeat family protein [Fusobacterium sp. 3_1_27]
 gi|294488094|gb|EFG35445.1| tetratricopeptide repeat family protein [Fusobacterium sp. 3_1_27]
          Length = 397

 Score = 35.5 bits (81), Expect = 8.0,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 44/136 (32%), Gaps = 19/136 (13%)

Query: 47  YLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
           Y + +         Y  +   +   + + KA E +N+     P    +         V Y
Sbjct: 16  YTEKIKKDPDNDTYYHNRGATYHNLKEYEKAIEDYNKAIELNPNNTTSYN---NIGAVYY 72

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYL--VGMSYAQMIRDVPYDQRATKLMLQYMS 163
           +  +Y++A       I   P     DY  +    G  Y+++ R         +  ++  S
Sbjct: 73  NLKEYEKAIESCNSAIRLTP-----DYHLFYRNRGRIYSKLKR--------YQDAIKDYS 119

Query: 164 RIVERYTNSPYVKGAR 179
             +    ++   K  +
Sbjct: 120 EAIRLNPDNEIAKKLK 135


>gi|302502182|ref|XP_003013082.1| hypothetical protein ARB_00627 [Arthroderma benhamiae CBS 112371]
 gi|291176644|gb|EFE32442.1| hypothetical protein ARB_00627 [Arthroderma benhamiae CBS 112371]
          Length = 1171

 Score = 35.5 bits (81), Expect = 8.0,   Method: Composition-based stats.
 Identities = 20/143 (13%), Positives = 44/143 (30%), Gaps = 22/143 (15%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108
            D    +  Y     ++ +  + KAYE + Q        P              + Y   
Sbjct: 357 ADNSDAQSWYLLGRCYMSQAKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIN 410

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +Y+ A       I   P    +  V+Y +G +  +   +   D       L    R  + 
Sbjct: 411 QYRDALDAYSRAIRLNP---YISEVWYDLG-TLYESCNNQTSD------ALDAYGRAADL 460

Query: 169 YTNSPYVKGARFYVTVGRNQLAA 191
              + ++   +  + + ++  A 
Sbjct: 461 DPTNVHI---KARLQLLQSGQAG 480


>gi|298527692|ref|ZP_07015096.1| Tetratricopeptide TPR_2 repeat protein [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298511344|gb|EFI35246.1| Tetratricopeptide TPR_2 repeat protein [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 318

 Score = 35.5 bits (81), Expect = 8.0,   Method: Composition-based stats.
 Identities = 20/133 (15%), Positives = 49/133 (36%), Gaps = 8/133 (6%)

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY--- 199
            +        +  +  +     +   +    Y      Y+   R+ L      + ++   
Sbjct: 190 DLQEHFTRQAQRNRTAMSLNRDMNAAFAAGDY-DDVHEYMVRLRDILPGASPLVLKWEGI 248

Query: 200 -YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
             ++  +Y  A  +FQ VL+   +      A A L  A + L   D+AR++++ ++ + P
Sbjct: 249 LAMQDNDYEKARRKFQAVLSQNPEDSS---ARANLALAMLKLDRTDQARKILAELRAKSP 305

Query: 259 QGYWARYVETLVK 271
                  +  L++
Sbjct: 306 DNPMIETLTRLLR 318


>gi|240254442|ref|NP_178674.6| ELF8 (EARLY FLOWERING 8); binding [Arabidopsis thaliana]
 gi|207079706|tpd|FAA00428.1| TPA: VERNALIZATION INDEPENDENCE 6 [Arabidopsis thaliana]
 gi|330250911|gb|AEC06005.1| protein early flowering 8 [Arabidopsis thaliana]
          Length = 1091

 Score = 35.5 bits (81), Expect = 8.0,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 61/194 (31%), Gaps = 34/194 (17%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           K  L L +     A + F       P       +LL  A V+++ G++ ++  L +  + 
Sbjct: 134 KGQLLLAKGEIDNALQAFKIVLDTAPDN---VPALLGQASVEFNRGRFSESLQLYKRALQ 190

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
            +P       V   +G+   ++               Q   R+++   ++     A   +
Sbjct: 191 VFPGCPAA--VRLGIGLCRYKL--------GQLDKARQAFDRVLQLDPDNVEALVALGIM 240

Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
            +  N        IG   +++G     + R Q     Y    +   A+  L   +     
Sbjct: 241 DLQAND------SIG---MRKG-----MDRMQQAFEIYP---YCASALNYLANHFFFTGQ 283

Query: 243 ----MDEAREVVSL 252
                      +++
Sbjct: 284 HFLVEQLTETALAV 297


>gi|158337068|ref|YP_001518243.1| hypothetical protein AM1_3942 [Acaryochloris marina MBIC11017]
 gi|158307309|gb|ABW28926.1| TPR repeat protein [Acaryochloris marina MBIC11017]
          Length = 232

 Score = 35.5 bits (81), Expect = 8.0,   Method: Composition-based stats.
 Identities = 15/133 (11%), Positives = 40/133 (30%), Gaps = 14/133 (10%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
           +  S  ++     +      E          + ++  A E ++Q  + +        +L 
Sbjct: 57  DSSSGPEIQAPQPSSQPSVTETVRLGDDRYAQADYKGAIEAYSQALQAYKLNAY---ALY 113

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
             A        Y+ A +     +   P++    + Y   GM+  +         +     
Sbjct: 114 NRANAYRQLEAYEAAIADYTTALKIAPDNL---FAYLYRGMALYEK--------KQPAEA 162

Query: 159 LQYMSRIVERYTN 171
           +   S+++E    
Sbjct: 163 IADFSKVIELNPK 175


>gi|82778715|ref|YP_405064.1| hypothetical protein SDY_3602 [Shigella dysenteriae Sd197]
 gi|309785772|ref|ZP_07680403.1| tetratricopeptide repeat family protein [Shigella dysenteriae 1617]
 gi|81242863|gb|ABB63573.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
 gi|308926892|gb|EFP72368.1| tetratricopeptide repeat family protein [Shigella dysenteriae 1617]
          Length = 248

 Score = 35.5 bits (81), Expect = 8.0,   Method: Composition-based stats.
 Identities = 18/155 (11%), Positives = 48/155 (30%), Gaps = 23/155 (14%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS--AFVQYS 106
           + +      +  Y  A    + + + +A  ++ Q          A ++ +M   A  Q++
Sbjct: 78  EELAIAETNQNHYALANELARLERYHEAVPHYQQALS----GIFAHEAAMMLSLAQAQFA 133

Query: 107 AGKYQQAASLGEEYITQYPESKNVD-YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
             ++       E+ +   P+ ++ D ++ +   ++           Q            +
Sbjct: 134 IQEFAACQQTLEDVMRYNPDFQSADGHLLFARALA----------AQEKYADAESEFEVL 183

Query: 166 VERYTNSP---YVKGARFYVTVGRNQLAAKEVEIG 197
           V  Y       Y       ++  R    A E  + 
Sbjct: 184 VSYYPGPQARIYYAEMLAKMSRLRE---ANEQYVA 215


>gi|291401767|ref|XP_002717207.1| PREDICTED: signal recognition particle 72kDa [Oryctolagus
           cuniculus]
          Length = 671

 Score = 35.5 bits (81), Expect = 8.1,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 34/98 (34%), Gaps = 14/98 (14%)

Query: 44  RDVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCSR--DFPFAGVA------R 94
             V  +++       E+ Y  A   + + + ++A +   +        F+  +       
Sbjct: 162 EKVVPENLGLQEGTHELCYNAACALIGQGHLNQAMKILQKAEDLCRHSFSEDSDVTEEDP 221

Query: 95  KSLLMS-----AFVQYSAGKYQQAASLGEEYITQYPES 127
           ++ L       A++    G+ ++A  L  + I   P  
Sbjct: 222 EAELAIIHGQMAYILQLQGRTEEALQLYNQIIKLKPTD 259


>gi|218130243|ref|ZP_03459047.1| hypothetical protein BACEGG_01831 [Bacteroides eggerthii DSM 20697]
 gi|217987527|gb|EEC53855.1| hypothetical protein BACEGG_01831 [Bacteroides eggerthii DSM 20697]
          Length = 302

 Score = 35.5 bits (81), Expect = 8.1,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 28/68 (41%), Gaps = 3/68 (4%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +  +A ++++    + A   ++             ++LLM A++     +Y+ A +  E 
Sbjct: 116 LLNRAAIYMELGRNNLAQADYSLVLDL---EKNNEEALLMRAYIYMQQREYKMAKADYER 172

Query: 120 YITQYPES 127
            +   P S
Sbjct: 173 LLKVNPAS 180


>gi|163739668|ref|ZP_02147077.1| Tetratricopeptide TPR_2 [Phaeobacter gallaeciensis BS107]
 gi|161387127|gb|EDQ11487.1| Tetratricopeptide TPR_2 [Phaeobacter gallaeciensis BS107]
          Length = 210

 Score = 35.5 bits (81), Expect = 8.1,   Method: Composition-based stats.
 Identities = 15/94 (15%), Positives = 28/94 (29%), Gaps = 17/94 (18%)

Query: 62  EKAVLFLKEQ-------NFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQ 112
            +A   L          +F  A E F++     P +A    +++     FV Y    +  
Sbjct: 81  AEAQALLDRGMTRRSAFDFLGALEAFDRLVAYCPDYAEGYNQRA-----FVHYLRRDFAA 135

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
           A    +  +   P             +S   + R
Sbjct: 136 ALRDLDRALDLSPRHVA---ALSGRALSLYGLSR 166


>gi|145232151|ref|XP_001399530.1| transcriptional corepressor Cyc8 [Aspergillus niger CBS 513.88]
 gi|134056441|emb|CAL00608.1| unnamed protein product [Aspergillus niger]
          Length = 858

 Score = 35.5 bits (81), Expect = 8.1,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 46/143 (32%), Gaps = 22/143 (15%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108
            D    +  Y     ++ +  + KAYE + Q        P              + Y   
Sbjct: 297 ADNSDAQSWYLLGRCYMSQAKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIN 350

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +Y+ A       I   P    +  V+Y +G +  +   +   D       L    R  + 
Sbjct: 351 QYRDALDAYSRAIRLNP---YISEVWYDLG-TLYESCNNQIAD------ALDAYGRAADL 400

Query: 169 YTNSPYVKGARFYVTVGRNQLAA 191
              + ++   +  + + ++QL+ 
Sbjct: 401 DPTNVHI---KARLQLLQSQLSG 420


>gi|119509153|ref|ZP_01628304.1| TPR repeat protein [Nodularia spumigena CCY9414]
 gi|119466319|gb|EAW47205.1| TPR repeat protein [Nodularia spumigena CCY9414]
          Length = 226

 Score = 35.5 bits (81), Expect = 8.1,   Method: Composition-based stats.
 Identities = 14/117 (11%), Positives = 41/117 (35%), Gaps = 7/117 (5%)

Query: 19  LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
           +YK    +   +++ F        ++   L + T     + ++E+    +   +++ A  
Sbjct: 1   MYKRISLVVAVLSLGFSAVSIPSVAQAQVLMAQTTNPQLKRLFEEGQRLVAANDYNGAIA 60

Query: 79  YFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
            + Q ++  P     R + +     ++    G +  A +     I     + +  Y 
Sbjct: 61  IYQQAAQIEP-----RNARIHSGIGYLYAQQGNFPPALASYRRAIAIDANNSDFHYA 112


>gi|94971006|ref|YP_593054.1| TPR repeat-containing serine/threonin protein kinase [Candidatus
           Koribacter versatilis Ellin345]
 gi|94553056|gb|ABF42980.1| serine/threonine protein kinase with TPR repeats [Candidatus
           Koribacter versatilis Ellin345]
          Length = 1023

 Score = 35.5 bits (81), Expect = 8.1,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 50/154 (32%), Gaps = 24/154 (15%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM-SAFVQYSAGKYQQAASLGEEYIT 122
           A          KA  Y  +  +  P      + LL   +++  + G + +A +  E Y+ 
Sbjct: 648 ASQLNNAGEPEKALTYIEEGLKLNP----KEEVLLNFRSYILANLGDFPEALASNEAYMA 703

Query: 123 QYPESKN-VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN----SPYVKG 177
             P   N +D        ++  ++     D       L    +++E   +    S Y K 
Sbjct: 704 LRPGDPNPLD--------THGDILFIAGRDD----EALAAYRKVMEVRPDFGSSSEYFKL 751

Query: 178 ARFYVTVGRNQLAA--KEVEIGRYYLKRGEYVAA 209
           A  Y    +  LA    +    +       Y+ A
Sbjct: 752 AVVYTDQKKRDLAKIATDQFAAKTNALTKAYLPA 785


>gi|94263251|ref|ZP_01287067.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93456334|gb|EAT06458.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 608

 Score = 35.5 bits (81), Expect = 8.1,   Method: Composition-based stats.
 Identities = 15/118 (12%), Positives = 40/118 (33%), Gaps = 27/118 (22%)

Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVY-YLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
            G++++A +  +  ++ +PE++++ Y+Y YL G            D+      +  +   
Sbjct: 451 MGEFEEAITHFQRSLSLHPEAEDLPYIYAYL-GECL--------KDKGDFGEAIAALESG 501

Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
           +         +     +                   KRG++  A+  F   +     +
Sbjct: 502 LA---EDEERQDIHNMLGFCH--------------YKRGDHQTAVKHFARAIEIEPGS 542


>gi|332661979|ref|YP_004451448.1| sulfatase-modifying factor protein [Haliscomenobacter hydrossis DSM
           1100]
 gi|332337476|gb|AEE54575.1| Sulphatase-modifying factor protein [Haliscomenobacter hydrossis
           DSM 1100]
          Length = 591

 Score = 35.5 bits (81), Expect = 8.1,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 19/63 (30%), Gaps = 6/63 (9%)

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
             +   YV+Y       +        Q  T+       R   +Y +S Y   A   + + 
Sbjct: 244 GHQYGQYVFYFR---EDEAADWQTTLQADTRQAYSNFYR---KYPHSNYADEALAKLELI 297

Query: 186 RNQ 188
             +
Sbjct: 298 EEK 300


>gi|329960080|ref|ZP_08298544.1| tetratricopeptide repeat protein [Bacteroides fluxus YIT 12057]
 gi|328533032|gb|EGF59805.1| tetratricopeptide repeat protein [Bacteroides fluxus YIT 12057]
          Length = 283

 Score = 35.5 bits (81), Expect = 8.1,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
           +++LLM A++      Y+ A S  E  +   P S
Sbjct: 128 QEALLMRAYIYRQKRDYKAARSDYERLLKLNPLS 161


>gi|297567201|ref|YP_003686173.1| hypothetical protein Mesil_2821 [Meiothermus silvanus DSM 9946]
 gi|296851650|gb|ADH64665.1| conserved hypothetical protein [Meiothermus silvanus DSM 9946]
          Length = 676

 Score = 35.5 bits (81), Expect = 8.1,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 28/79 (35%), Gaps = 8/79 (10%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D+   R+ Y++A+    +Q F  A E   +     P     +       ++    G+  Q
Sbjct: 364 DLLGARQAYDQALQLDDKQEFKAALEDLAKAKN--PLLTYWQ------GYLSERTGEVAQ 415

Query: 113 AASLGEEYITQYPESKNVD 131
           A +  + +    P+     
Sbjct: 416 AQAFYQRFAEANPQHPLAP 434


>gi|210135284|ref|YP_002301723.1| hypothetical protein HPP12_1091 [Helicobacter pylori P12]
 gi|210133252|gb|ACJ08243.1| hypothetical protein HPP12_1091 [Helicobacter pylori P12]
          Length = 331

 Score = 35.5 bits (81), Expect = 8.1,   Method: Composition-based stats.
 Identities = 21/149 (14%), Positives = 58/149 (38%), Gaps = 27/149 (18%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR--------DFPFAG 91
           +++     ++   D+  Q+E++++A+ F + +++++A E                +    
Sbjct: 189 KKTQEKAKVEFDKDLSKQKEIFQEALSFFRNKSYAEAKERLLWLEANSYRLYYVRYVLGE 248

Query: 92  VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
           VA           Y   KY++A    +E      ++  +  + +    S+ ++  D  Y 
Sbjct: 249 VA-----------YEEKKYREAIKYYKESALLNKKASYMPVLLWHTAWSFKKIKDDQNY- 296

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARF 180
                   ++++ +   Y +S   K A+ 
Sbjct: 297 -------YKFLNTLQHLYPSSEQAKMAQK 318


>gi|209525411|ref|ZP_03273951.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
 gi|209494091|gb|EDZ94406.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
          Length = 404

 Score = 35.5 bits (81), Expect = 8.1,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 39/114 (34%), Gaps = 16/114 (14%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA-RKSLLMSAFVQYSAGKYQQAASLG 117
           E+  + +  ++  ++S A    +Q     P    A  ++ L   F   +   +Q A S  
Sbjct: 183 ELNNRGMEKIQAGDYSAAIVTLSQAVELNP----ALMEAYLNRGFAYAAMDSHQSALSNY 238

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
              I     S      YY  G  Y Q+ R         +  L   ++ ++   N
Sbjct: 239 TTAIRVNSSSPE---PYYFRGEEYLQLGR--------FEEALTDYNKAIDLDPN 281


>gi|172037765|ref|YP_001804266.1| hypothetical protein cce_2852 [Cyanothece sp. ATCC 51142]
 gi|171699219|gb|ACB52200.1| unknown [Cyanothece sp. ATCC 51142]
          Length = 936

 Score = 35.5 bits (81), Expect = 8.1,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 65/164 (39%), Gaps = 21/164 (12%)

Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYL-VGMSYAQMIRDVPY-DQRATKLMLQYMS 163
             GK  +A +   + I  +PE     Y  YL +        +D  +   R  + ++++  
Sbjct: 276 KQGKIAEAEATYLQAIANFPEH----YGCYLNLANLLLDQAKDENHCPPRRFEDIIRFYQ 331

Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
           +++E Y N  +   A   +     QLA  E E   +Y     Y +A   ++  +  Y   
Sbjct: 332 KVLEFYENHSF---ALLGLAEVY-QLAQNEEE-ALWYFASSAYYSAE--YESAVEYY--T 382

Query: 224 EHAEE------AMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
           ++ ++      A + L+  Y  L   D+A E+     +++P   
Sbjct: 383 KYIDKNPNNVTAYSNLLTTYEKLRDYDQAIEIGEKSLQQFPTNR 426


>gi|170104862|ref|XP_001883644.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164641279|gb|EDR05540.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 183

 Score = 35.5 bits (81), Expect = 8.1,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 27/72 (37%), Gaps = 10/72 (13%)

Query: 62  EKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+  L L+E +   A E +    +  R+         SL       Y   +Y +A    +
Sbjct: 24  EQGTLKLEEGDVQAAKELYQRSAEIKRN-------ASSLFNLGVTHYHLKEYDEAIEAWK 76

Query: 119 EYITQYPESKNV 130
           E I+  P S + 
Sbjct: 77  ESISLQPSSPDA 88


>gi|153004815|ref|YP_001379140.1| lytic transglycosylase catalytic subunit [Anaeromyxobacter sp.
           Fw109-5]
 gi|152028388|gb|ABS26156.1| Lytic transglycosylase catalytic [Anaeromyxobacter sp. Fw109-5]
          Length = 756

 Score = 35.5 bits (81), Expect = 8.1,   Method: Composition-based stats.
 Identities = 19/156 (12%), Positives = 48/156 (30%), Gaps = 13/156 (8%)

Query: 48  LDSVTDVRYQREVYEKAVLFL-----KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
           +  +       ++  +A   L     K ++++ A E             V  ++L + A 
Sbjct: 252 VPELAAAAPGEDLACRARAALGRAHRKTRSYADAVEALRPVVESCDDPSVRVRALYLVAG 311

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
              + G  + A +L       YP     D   +        ++     +        + +
Sbjct: 312 ATANTGDKEGAVALYRRLARDYPRHTLADDALFFAA----DLLLRAERE----GEAREAL 363

Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
           + IV  +    +   ARF +     +    +  + +
Sbjct: 364 AAIVRDHRGGDHWDEARFRLAWLARRAGDHDGAVAQ 399


>gi|149922550|ref|ZP_01910980.1| serine/threonine kinase family protein [Plesiocystis pacifica
           SIR-1]
 gi|149816577|gb|EDM76072.1| serine/threonine kinase family protein [Plesiocystis pacifica
           SIR-1]
          Length = 1005

 Score = 35.5 bits (81), Expect = 8.1,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 58/205 (28%), Gaps = 52/205 (25%)

Query: 64  AVLFLKEQNFSKAYEYFN---QCSRD--FPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
            +  L +++++ A+               P   +   +L+  A   +  G +  A  L E
Sbjct: 784 GIAQLGKKDYTAAFASLERAAAVRERTLGPEHPLLSTTLVNLAVAHHETGDFAAALPLLE 843

Query: 119 EYI----TQY-PES-------------------KNVDYVYYLVGMSYAQMIRDVPY---- 150
             +      Y P                           Y+   ++  +  R  P+    
Sbjct: 844 RALTIREKTYDPGHRKIIIVLQHLGRVELDRGEPEAAREYHRRALAMIEAKRPPPHKLLG 903

Query: 151 ------------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG-RNQLAAKEVEIG 197
                       D   T  +L+    +        +   +   V      +L     EI 
Sbjct: 904 ETLLDLARVDLADPEPTDEVLERALSLA------EHALESYMQVEELSTERLGRAHFEIA 957

Query: 198 RYYLKRGEYVAAIPRFQLVLANYSD 222
             +L RGE  AA    ++  + YS+
Sbjct: 958 SVHLARGEREAATKHARIAASTYSE 982


>gi|153955549|ref|YP_001396314.1| hypothetical protein CKL_2934 [Clostridium kluyveri DSM 555]
 gi|219855943|ref|YP_002473065.1| hypothetical protein CKR_2600 [Clostridium kluyveri NBRC 12016]
 gi|146348407|gb|EDK34943.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
 gi|219569667|dbj|BAH07651.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 284

 Score = 35.5 bits (81), Expect = 8.1,   Method: Composition-based stats.
 Identities = 8/85 (9%), Positives = 31/85 (36%), Gaps = 12/85 (14%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF--PFAGVARKSL----------L 98
             +++  + +Y+  +  +  +++  A + F + ++++   ++   +K            +
Sbjct: 77  AENLKTVKSIYDSGLNLMNNKDYEGAIQQFQKIAKEYDKSYSNAQKKIQECKKSLISKNI 136

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQ 123
             A       KY +A       +  
Sbjct: 137 DLANNAIKNSKYNEATEYINSILKM 161


>gi|115376203|ref|ZP_01463445.1| soluble lytic murein transglycosylase, putative [Stigmatella
           aurantiaca DW4/3-1]
 gi|310821749|ref|YP_003954107.1| transglycosylase [Stigmatella aurantiaca DW4/3-1]
 gi|115366776|gb|EAU65769.1| soluble lytic murein transglycosylase, putative [Stigmatella
           aurantiaca DW4/3-1]
 gi|309394821|gb|ADO72280.1| Transglycosylase [Stigmatella aurantiaca DW4/3-1]
          Length = 711

 Score = 35.5 bits (81), Expect = 8.1,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 40/122 (32%), Gaps = 7/122 (5%)

Query: 68  LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
           L+   F++A + F+   + +P +    + L   A       +Y +A     + ++  P+S
Sbjct: 332 LQAGRFAEAVKAFSLYEQRYPRSRRRDEGLWFRALALLRLERYAEAREALGQLVSGAPKS 391

Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
             V    Y +        R       +  L +     +V     S Y   A   +     
Sbjct: 392 NLVPQARYWIA-------RSQELGGASAALTVPAYEAVVTTAPASFYALLASERLRALGR 444

Query: 188 QL 189
            L
Sbjct: 445 AL 446


>gi|159901410|ref|YP_001547657.1| TPR repeat-containing protein [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159894449|gb|ABX07529.1| TPR repeat-containing protein [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 246

 Score = 35.5 bits (81), Expect = 8.1,   Method: Composition-based stats.
 Identities = 6/77 (7%), Positives = 21/77 (27%), Gaps = 13/77 (16%)

Query: 62  EKAVLFLKEQNFSKAYEY----FNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAAS 115
                  +  ++  A E                  A ++++        +   +  +A  
Sbjct: 63  NLGNTRYQMGDYLGAIEAPNNALQTADA-------ATQAIIYYNQGNAHFRLEELDEAIE 115

Query: 116 LGEEYITQYPESKNVDY 132
             ++ +   P+  +  Y
Sbjct: 116 AYKKALRINPDDLDAKY 132


>gi|311279809|ref|YP_003942040.1| Tetratricopeptide TPR_1 repeat-containing protein [Enterobacter
           cloacae SCF1]
 gi|308749004|gb|ADO48756.1| Tetratricopeptide TPR_1 repeat-containing protein [Enterobacter
           cloacae SCF1]
          Length = 389

 Score = 35.5 bits (81), Expect = 8.2,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 62/188 (32%), Gaps = 40/188 (21%)

Query: 64  AVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
              ++    + +A + F+Q     DF    + +   +  A        +Q+A  + E  +
Sbjct: 114 GRDYMAAGLYDRAEDMFSQLVDETDFRIGALQQLLQIYQA-----TSDWQKAIEVAERLV 168

Query: 122 TQ----YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
                 +     + + +  + +   Q + +   D       +  + +      NS     
Sbjct: 169 KLGKEKH--RPEIAHFWCELAL---QQMGNNDMD-----KAISLLKKGAAADRNS----- 213

Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
           AR  + +GR  +A             GEY  A+   Q V+    D E   E +  L   Y
Sbjct: 214 ARISIMMGRVLMAQ------------GEYDKAVESLQRVIE--QDRELVSETLEMLQTCY 259

Query: 238 VALALMDE 245
             L   DE
Sbjct: 260 QQLGKNDE 267


>gi|296812083|ref|XP_002846379.1| RCM-1 [Arthroderma otae CBS 113480]
 gi|238841635|gb|EEQ31297.1| RCM-1 [Arthroderma otae CBS 113480]
          Length = 910

 Score = 35.5 bits (81), Expect = 8.2,   Method: Composition-based stats.
 Identities = 20/143 (13%), Positives = 44/143 (30%), Gaps = 22/143 (15%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108
            D    +  Y     ++ +  + KAYE + Q        P              + Y   
Sbjct: 336 ADNSDAQSWYLLGRCYMSQAKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIN 389

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +Y+ A       I   P    +  V+Y +G +  +   +   D       L    R  + 
Sbjct: 390 QYRDALDAYSRAIRLNP---YISEVWYDLG-TLYESCNNQTSD------ALDAYGRAADL 439

Query: 169 YTNSPYVKGARFYVTVGRNQLAA 191
              + ++   +  + + ++  A 
Sbjct: 440 DPTNAHI---KARLQLLQSGQAG 459


>gi|225871759|ref|YP_002753213.1| TPR domain protein [Acidobacterium capsulatum ATCC 51196]
 gi|225793720|gb|ACO33810.1| TPR domain protein [Acidobacterium capsulatum ATCC 51196]
          Length = 185

 Score = 35.5 bits (81), Expect = 8.2,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 33/97 (34%), Gaps = 17/97 (17%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
            R   +++   S  +     E Y+ AVL L + N+  A E+ +      P A        
Sbjct: 72  ARACEKEMQKSSGLEFSSIEERYDYAVLLLNQGNYEDAREHIDAILTSRPEAD------- 124

Query: 99  MSAFVQY-------SAGKYQQAASLGEEYITQYPESK 128
              +  Y         G+ ++        I   P+++
Sbjct: 125 ---YAYYGAALLASMTGQAEECLQHLGRAIELNPQNR 158


>gi|261418330|ref|YP_003252012.1| hypothetical protein GYMC61_0863 [Geobacillus sp. Y412MC61]
 gi|297529182|ref|YP_003670457.1| hypothetical protein GC56T3_0837 [Geobacillus sp. C56-T3]
 gi|319767711|ref|YP_004133212.1| hypothetical protein GYMC52_2690 [Geobacillus sp. Y412MC52]
 gi|261374787|gb|ACX77530.1| conserved hypothetical protein [Geobacillus sp. Y412MC61]
 gi|297252434|gb|ADI25880.1| hypothetical protein GC56T3_0837 [Geobacillus sp. C56-T3]
 gi|317112577|gb|ADU95069.1| hypothetical protein GYMC52_2690 [Geobacillus sp. Y412MC52]
          Length = 326

 Score = 35.5 bits (81), Expect = 8.2,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 23/59 (38%), Gaps = 3/59 (5%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
           + +  + E+A   L+ + + +A  +     +       +    L  A   Y  G+Y +A
Sbjct: 13  QTKERLMEEAFAALEAKRYKEALRFLRAAEQL---GDHSFPVRLGLAVCCYELGEYDEA 68


>gi|118396400|ref|XP_001030540.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89284847|gb|EAR82877.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 294

 Score = 35.5 bits (81), Expect = 8.2,   Method: Composition-based stats.
 Identities = 19/158 (12%), Positives = 47/158 (29%), Gaps = 36/158 (22%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQ--------CSRDFPFAGVARKSLL-------------MS 100
            K     ++QN+  A +++++                 + +K  +               
Sbjct: 68  NKGKEAFQKQNYQAAVKHYSKALLALQFLIKD----GQIKQKEQMVKFIEDIEIPCNSNL 123

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           +       +Y+Q      + I   P +       Y  GM++  +                
Sbjct: 124 SICNLKLKEYKQCIHFASKVIENDPNNIK---CLYRRGMAHLYL--------NEFDDARN 172

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
                     NS  ++ A   + + + Q+A K+ +I +
Sbjct: 173 DFKTAYALDPNSKELQLAFEQLQIRKQQVAEKQKQISK 210


>gi|86609036|ref|YP_477798.1| TPR repeat-containing protein [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86557578|gb|ABD02535.1| tetratricopeptide repeat protein [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 700

 Score = 35.5 bits (81), Expect = 8.2,   Method: Composition-based stats.
 Identities = 14/111 (12%), Positives = 41/111 (36%), Gaps = 14/111 (12%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  AV   +   +  +  +F +  +  P +       +         G+ ++A +  ++ 
Sbjct: 495 YALAVAQQELGQYEASLRHFQRLVQQRPGSSACWFGQITGLR---RLGRLEEARAACQQM 551

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           I          + ++ +G+ Y+++      D    +  +Q  SR+++    
Sbjct: 552 IHLNERDP---WGWFALGLIYSEL-----RDP---EQAVQAYSRVLQLTPE 591


>gi|83645406|ref|YP_433841.1| TPR repeat-containing protein [Hahella chejuensis KCTC 2396]
 gi|83633449|gb|ABC29416.1| FOG: TPR repeat [Hahella chejuensis KCTC 2396]
          Length = 584

 Score = 35.5 bits (81), Expect = 8.2,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 33/92 (35%), Gaps = 14/92 (15%)

Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
              +    + + +LA           +  E+  A+  F+  +   S  +  +EA+  +  
Sbjct: 108 AEVKQQAQMIKGRLA----------YRDEEWGTAVELFEGAMKGMSRDK-KDEALYYMAN 156

Query: 236 AYVALALMDEAREVVSLIQERYPQGYWARYVE 267
           +Y+ L    EA     ++ +      WA +  
Sbjct: 157 SYLQLRRPQEA---AKVLGDASKGSLWAAHGY 185


>gi|323436000|ref|ZP_01049613.2| two-component system sensor histidine kinase/response regulator
           [Dokdonia donghaensis MED134]
 gi|321496315|gb|EAQ39585.2| two-component system sensor histidine kinase/response regulator
           [Dokdonia donghaensis MED134]
          Length = 743

 Score = 35.5 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 66/196 (33%), Gaps = 26/196 (13%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-------KSLLMSAFVQYSAGKYQQAASL 116
           A    K + ++ A +  +        + +         +   +   +  +      A   
Sbjct: 39  AQEQHKRKEYTSAIKTLDTLLN----SPLVEEDVKVQFQGYTLLGDIYLTLKDTPSAHEA 94

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            E  +T   +SKN D    L+ +S++ + +         +       + ++ YT      
Sbjct: 95  FERALTMAQKSKN-DT---LLAISHSNLGKTYSIYPEFEERATALFKKSIDAYTKLNLRD 150

Query: 177 GARF-YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV-LANYSDAEHAEEAMARLV 234
            A   Y+ + R  LA     I + Y        A+   +++ L +  + +   + +  L 
Sbjct: 151 MALQSYIDLSRMHLAQD--NIAKAY-------PALMEAKMMSLRDTQNYKPRAQILTLLG 201

Query: 235 EAYVALALMDEAREVV 250
           + Y+A      A E +
Sbjct: 202 KYYIAKDKRTLAEEAL 217


>gi|311694783|gb|ADP97656.1| TPR repeat protein [marine bacterium HP15]
          Length = 891

 Score = 35.5 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 37/110 (33%), Gaps = 24/110 (21%)

Query: 70  EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV-----QYSAGKYQQAASLGEEYITQY 124
             ++  A E F +         +A    +  A              Q+A S  + Y+ +Y
Sbjct: 164 AGDYQAAIEQFEK--------ALAEGWQVEKATAGILKTYLHLNNPQKAVSEADSYLAEY 215

Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
           PES     V  L G +   + R         +  ++ ++  V    NS +
Sbjct: 216 PESSE---VLMLKGRALYTLNR--------LEPAVEALTAAVGALPNSDF 254


>gi|307718781|ref|YP_003874313.1| hypothetical protein STHERM_c10950 [Spirochaeta thermophila DSM
           6192]
 gi|306532506|gb|ADN02040.1| hypothetical protein STHERM_c10950 [Spirochaeta thermophila DSM
           6192]
          Length = 226

 Score = 35.5 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 48/149 (32%), Gaps = 31/149 (20%)

Query: 117 GEEYITQYPESKNVDYVYYLVG-MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
            + Y   YP  +      YL+G +++          Q        +  R+ + +  S   
Sbjct: 93  VDTYRKAYPSQR----AMYLLGHLAFW---------QEDWDDASIWFDRLAKEFPRSYLA 139

Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN-YSDAEHAEEAMARLV 234
             A       R  L              G+   A  R++ V+   +  +     A+  L 
Sbjct: 140 AVALLDAAAARENL--------------GDTSGATTRYEKVIEAGF--SVLKPRALFSLG 183

Query: 235 EAYVALALMDEAREVVSLIQERYPQGYWA 263
               +    + AR++ + + E YP   W+
Sbjct: 184 RLKESSGDREGARQIYTQLLEDYPSSQWS 212


>gi|300868209|ref|ZP_07112841.1| putative Glycosyl transferase, family 2 [Oscillatoria sp. PCC 6506]
 gi|300333833|emb|CBN58025.1| putative Glycosyl transferase, family 2 [Oscillatoria sp. PCC 6506]
          Length = 1545

 Score = 35.5 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 17/159 (10%), Positives = 42/159 (26%), Gaps = 41/159 (25%)

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPE----SKNVDYVY------------YLVGM--- 139
             A        ++ A +     I   P+      N+                Y   +   
Sbjct: 605 NLAEALVKLEDWEGAIAAYRRAIELNPDFFWSHNNLGDALIELERWEESVPVYRRALELN 664

Query: 140 -----SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
                ++  + + + + Q      +    R  E   + P++      +     Q A  ++
Sbjct: 665 PDFAWAHYNLGQALEH-QEEWDEAIASYRRAAEIQPDLPWLP---QKLADAIRQRAQWDL 720

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYS-DAEHAEEAMAR 232
           E            AA   ++  +     D +   +A+  
Sbjct: 721 E------------AASKLYREAIEYNPDDVQLYHKALEI 747


>gi|294625957|ref|ZP_06704569.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292599752|gb|EFF43877.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 251

 Score = 35.5 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 45/132 (34%), Gaps = 19/132 (14%)

Query: 64  AVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           A   L   ++++A E++       +         +L  A  Q+  G+ QQ     +  I 
Sbjct: 95  AETLLARGDYAQAAEHYQGALRGLY---RDDPHLMLGLAKAQFGLGRPQQTRQTLDALIA 151

Query: 123 QYPESKNVDYVYYLVG-MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
             P  ++ D      G + YA+ +         T+  L     + + Y      + AR  
Sbjct: 152 ANPSFRSHD------GHLLYARAVEGS----GDTEAALHEYDTLAQGYP----GEEARVR 197

Query: 182 VTVGRNQLAAKE 193
                 ++A  +
Sbjct: 198 YAQLLQRIARND 209


>gi|296081161|emb|CBI18187.3| unnamed protein product [Vitis vinifera]
          Length = 325

 Score = 35.5 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 17/150 (11%), Positives = 47/150 (31%), Gaps = 19/150 (12%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE-YFNQCSRDFPFAGVARKSLL-- 98
           S++++     +      E++E   + L+ + +  A +       +          + +  
Sbjct: 177 SAKELQEQVRSGDASATELFELGAVMLRRKFYPAATKFLLQAIEKWD--GDDQDLAQVYN 234

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
                    GK ++  +  E  +   P      YV      +    + D    ++  K  
Sbjct: 235 ALGVSYVRDGKLEKGITQFENAVKLQPG-----YV------TAWNNLGDAYEKKKDLKSA 283

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           L+    ++    N+     AR      +++
Sbjct: 284 LKAFEEVLLFDPNNK---VARPRRDALKDR 310


>gi|255073749|ref|XP_002500549.1| predicted protein [Micromonas sp. RCC299]
 gi|226515812|gb|ACO61807.1| predicted protein [Micromonas sp. RCC299]
          Length = 661

 Score = 35.5 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 34/83 (40%), Gaps = 9/83 (10%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
           + + R    +Y      +++    +  +       + P +   R +L +  +  Y  G +
Sbjct: 8   IPEGRATETIYG----LIRDGKHDECAKLLEIQLANAPDS---RPALSLLGYCYYYLGNF 60

Query: 111 QQAASLGEEYITQYPESKNVDYV 133
           ++AA +  +    +PE++  DY 
Sbjct: 61  ERAAEMYGQLAKLFPENE--DYA 81


>gi|226226814|ref|YP_002760920.1| hypothetical protein GAU_1408 [Gemmatimonas aurantiaca T-27]
 gi|226090005|dbj|BAH38450.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 918

 Score = 35.5 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 40/110 (36%), Gaps = 8/110 (7%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
             D      ++E+ ++  +  +  +A  +F +       +     + L  A V Y  G+ 
Sbjct: 138 AEDPDDGEALFERGLIEQRAGDLRRAQRWFERAVNAGAVSD----ARLHLAEVLYQRGQN 193

Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           +QA  L ++ +   P   +    + L G     M        +AT+   +
Sbjct: 194 EQALELLDQLLADSPRHAD---AHLLRGFLLGDMGHH-ERAMQATRRAAE 239


>gi|162453512|ref|YP_001615879.1| TPR repeat-containing protein [Sorangium cellulosum 'So ce 56']
 gi|161164094|emb|CAN95399.1| TPR repeat hypothetical protein [Sorangium cellulosum 'So ce 56']
          Length = 348

 Score = 35.5 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 28/105 (26%), Gaps = 21/105 (20%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y++AV  +    +  A     + +R  P       + L         GK   A       
Sbjct: 43  YDQAVTEMDASRYDSACPRLEEVTRLAPTG---LGAKLTLGECYERWGKLASA------- 92

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
                      +  Y +  S A         QRA +       R+
Sbjct: 93  -----------WSQYALVESLAPRAGQPERGQRAAEKAAALRPRL 126


>gi|157413635|ref|YP_001484501.1| O-linked N-acetylglucosamine transferase [Prochlorococcus marinus
           str. MIT 9215]
 gi|157388210|gb|ABV50915.1| Predicted O-linked N-acetylglucosamine transferase, SPINDLY family
           [Prochlorococcus marinus str. MIT 9215]
          Length = 632

 Score = 35.5 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 35/98 (35%), Gaps = 13/98 (13%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFN-----QCSRDFPFAGV 92
           + + ++ +YL  + +     E++     +  +  NF +A  YF      +          
Sbjct: 38  DFEGAKKIYLLLLENKYQNHEIFFNLGSIEFQSNNFLEAISYFERAKIIKLKNQ------ 91

Query: 93  ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
             +      +       Y +A  L  E + +YP S+ +
Sbjct: 92  -EQIYTFLIYCYGKLKNYSKATELFHESLEKYPRSEKL 128


>gi|148657770|ref|YP_001277975.1| cold-shock protein, DNA-binding [Roseiflexus sp. RS-1]
 gi|148569880|gb|ABQ92025.1| Cold-shock protein, DNA-binding [Roseiflexus sp. RS-1]
          Length = 1555

 Score = 35.5 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 10/67 (14%), Positives = 33/67 (49%), Gaps = 3/67 (4%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           T+ +  + +++ A+ +L+++++ +A + F +  R  P     +      A   +   +Y+
Sbjct: 587 TETKKAQILWQIAIGYLRKEDYVRAEQTFQELRRAQPDN---KSIQRNIALCLFKQERYE 643

Query: 112 QAASLGE 118
           +A  + +
Sbjct: 644 EARKILD 650


>gi|126522128|gb|AAI32385.1| Ttc23l protein [Mus musculus]
          Length = 464

 Score = 35.5 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 48/129 (37%), Gaps = 23/129 (17%)

Query: 2   SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY 61
              L  A+       +++   AL  F   A+C           DV LD   +      +Y
Sbjct: 213 EKDLTIALGRASLAMHRM-NLALAYFEK-AIC-----------DVILDKGHNTSELISLY 259

Query: 62  EK-AVLFLKEQNFSKAYEYFNQCSRDF--PFAGVARK-----SLLMSAFVQYSAGKYQQA 113
           E+ A +    +N  +A +Y  Q        F+ V+ +     +LL  A+    A +Y+ A
Sbjct: 260 EEIAQIEQLRKNHKQAIQYLQQAYSICVSSFSEVSPQTAEASALLAKAYAMSGASEYRDA 319

Query: 114 ASLGEEYIT 122
             +   +I 
Sbjct: 320 VEIY--FIR 326


>gi|121535420|ref|ZP_01667231.1| glycosyl transferase, family 2 [Thermosinus carboxydivorans Nor1]
 gi|121306019|gb|EAX46950.1| glycosyl transferase, family 2 [Thermosinus carboxydivorans Nor1]
          Length = 656

 Score = 35.5 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 41/115 (35%), Gaps = 28/115 (24%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSR-------DFPFAGVARKSLLMSAFVQYSAGKYQQA 113
           Y   V   + + + +A +   + +         +P      K L   A   Y A +Y+ A
Sbjct: 207 YHYGVELYRAERYLEAADELAKVAAAVDSGVVYYP------KLLRYIALAYYGAREYELA 260

Query: 114 ASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
            +   + +  +P     DY   YY  G+        +  +Q+A     ++  R +
Sbjct: 261 LAAITKGLQLFP-----DYADLYYYGGI--------IQLEQQAYAGAWEWFQRAI 302


>gi|14520245|ref|NP_125719.1| hypothetical protein PAB0017 [Pyrococcus abyssi GE5]
 gi|5457460|emb|CAB48951.1| Hypothetical protein [Pyrococcus abyssi GE5]
          Length = 339

 Score = 35.5 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 2/61 (3%)

Query: 195 EIGRYYLKRGEYVAAIPRFQLVLAN--YSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
           E+   Y   G+    I  ++ ++      D E   EA+  L +AY    + +EA +V + 
Sbjct: 57  EVAHLYEHLGKTQEGIELYKRIVEKRKNKDPEDYAEALYYLADAYEHFGMPEEALKVYNE 116

Query: 253 I 253
           +
Sbjct: 117 L 117


>gi|332020413|gb|EGI60833.1| Alpha-1,3-mannosyl-glycoprotein
           4-beta-N-acetylglucosaminyltransferase B [Acromyrmex
           echinatior]
          Length = 1048

 Score = 35.5 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 44/159 (27%), Gaps = 30/159 (18%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARK-----SLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
             +  A++              A       +LL +A +         A    E  I+  P
Sbjct: 207 GKYEPAFKDLECILNI----EYAPDDVKINALLKTADIHLEFMNLDMAFMNFELAISINP 262

Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
              ++   YY  G  Y  M                   + +E   N       + Y    
Sbjct: 263 HYSDI---YYRRGRVYMHM--------GELNKAKYDFEKALEYDPNFSMACIQKCYTDYC 311

Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
              L  K+V +           AA+  F+ VL  Y++  
Sbjct: 312 IAML-NKDVRLVE---------AAVRAFEKVLEKYTNLP 340


>gi|322421739|ref|YP_004200962.1| TPR repeat-containing protein [Geobacter sp. M18]
 gi|320128126|gb|ADW15686.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacter sp.
           M18]
          Length = 695

 Score = 35.5 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 76/249 (30%), Gaps = 57/249 (22%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           ++++    L      +A + F         +    K+    A   Y  G+   A      
Sbjct: 191 LFQQGESLLYRDQAEEAVKVF---------SVFTGKATGPRALACYRLGE---ALEQLGR 238

Query: 120 YITQYPESKNVDYVYYLVGMS----YAQMIRDV--PYDQRATK-----LMLQYMSRIVER 168
                   +     Y+  G S    Y +    +  PY     +          + R+++R
Sbjct: 239 -------HQEA-LAYFRQGESLWPQYLEQAPGLLQPYSDALARTGDFAAARAMLLRLMDR 290

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRY-----Y--------------LKRGEYVAA 209
           Y  +PY       +     +   KE  +  Y     Y                R  +  +
Sbjct: 291 YLGTPYQAELLNRLADLIERNGQKEAALAMYRSVAVYAPGSAAAGRALLKLADRELFTLS 350

Query: 210 IPRFQLVLANYS-------DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
             R++ +LA Y        D    +EA+ ++       A   EA E V+    RYP+G +
Sbjct: 351 RDRYRELLARYQGIYQQPGDPASRDEALFKMTLLLSLYAPPGEALESVATYDRRYPRGIF 410

Query: 263 ARYVETLVK 271
                 + +
Sbjct: 411 GTITRKMRE 419


>gi|229047022|ref|ZP_04192646.1| TPR domain protein [Bacillus cereus AH676]
 gi|228724313|gb|EEL75646.1| TPR domain protein [Bacillus cereus AH676]
          Length = 304

 Score = 35.5 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 66/177 (37%), Gaps = 15/177 (8%)

Query: 45  DVYLDSVTDVRYQREVYEKA-VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           +++  +V + R  + +   A + F +E+N  KA E   +  +  P +            +
Sbjct: 21  ELFQQAVHESRDVQSLNNLAWMYFYEEENDEKALELIREVVKLNPSSYFPYNI---LGDI 77

Query: 104 QYSAGKYQQAASLGEEYITQYPESK---NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
                K+ +A    ++ I+  P  +   NV   +Y +G    ++ +   +  R       
Sbjct: 78  YMKQEKWTEAKEALQKSISIQPSDEAYHNVAVAHYNLG----ELEKASDFFLRVAGDSDY 133

Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAK---EVEIGRYYLKRGEYVAAIPRFQ 214
            M   V+   +      A+  +    N+ A     E+ +   Y++   Y  AI  F+
Sbjct: 134 IMYSYVKCLIDLERTTEAKEKLD-TFNREADNFLGEIHVADLYVELNCYKEAIEWFE 189


>gi|300777710|ref|ZP_07087568.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
 gi|300503220|gb|EFK34360.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
          Length = 178

 Score = 35.5 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 19/143 (13%), Positives = 45/143 (31%), Gaps = 21/143 (14%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
           +     +  D     ++   A  +    +++ A + + + S   P    A  S    A+ 
Sbjct: 47  KKQVEANPKDTESLAKL---AAAYQDASDWTNAIDTWKKISVLLP--DWAP-SYYSQAYA 100

Query: 104 QYSAGKYQQAASLGEEYITQ------YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
             SA     A    E+YI            KN+ Y Y+ +  S  +   +          
Sbjct: 101 YQSAKDDANAKIAYEKYIATVKPEEVEQNKKNLAYAYFYLAFSEQKTYPN---------K 151

Query: 158 MLQYMSRIVERYTNSPYVKGARF 180
             +++++ ++    +        
Sbjct: 152 AKEHIAKSIQYDPTNEDALKLSK 174


>gi|224043784|ref|XP_002191051.1| PREDICTED: FK506 binding protein 4, 59kDa [Taeniopygia guttata]
          Length = 591

 Score = 35.5 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 32/82 (39%), Gaps = 2/82 (2%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKA 76
           +     L    ++A+C L   E   + +    ++  D   ++ ++ +    L   +F  A
Sbjct: 155 KAKSLRLAAHLNLAMCHLKLKEYSQALENCNKALELDSNNEKGLFRRGEAHLAVNDFELA 214

Query: 77  YEYFNQCSRDFPFAGVARKSLL 98
              F +  + +P +  A K  L
Sbjct: 215 RADFQKVIQLYP-SNKAAKVQL 235



 Score = 35.5 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 32/82 (39%), Gaps = 2/82 (2%)

Query: 18  QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKA 76
           +     L    ++A+C L   E   + +    ++  D   ++ ++ +    L   +F  A
Sbjct: 448 KAKSLRLAAHLNLAMCHLKLKEYSQALENCNKALELDSNNEKGLFRRGEAHLAVNDFELA 507

Query: 77  YEYFNQCSRDFPFAGVARKSLL 98
              F +  + +P +  A K  L
Sbjct: 508 RADFQKVIQLYP-SNKAAKVQL 528


>gi|195119406|ref|XP_002004222.1| GI19800 [Drosophila mojavensis]
 gi|193909290|gb|EDW08157.1| GI19800 [Drosophila mojavensis]
          Length = 1231

 Score = 35.5 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 22/63 (34%), Gaps = 3/63 (4%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
              +    +++ A   F +     P    A+   +           Y +A +  +E + Q
Sbjct: 551 GDAYAARGSYNSAIRVFQKILELSPNNSYAQL-QIALIKTTIRM--YPEAIADFDELLKQ 607

Query: 124 YPE 126
           YP+
Sbjct: 608 YPD 610


>gi|126663534|ref|ZP_01734531.1| hypothetical protein FBBAL38_09299 [Flavobacteria bacterium BAL38]
 gi|126624482|gb|EAZ95173.1| hypothetical protein FBBAL38_09299 [Flavobacteria bacterium BAL38]
          Length = 1086

 Score = 35.5 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 51/147 (34%), Gaps = 17/147 (11%)

Query: 26  IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
           +F S+ +        QS RD      TD      +   A  + +++ +S A   F + ++
Sbjct: 4   LFLSLLIIGCSNVFSQSKRDYSFAYSTDS-----IISTAFGYYQKEQYSNAITEFKKIAK 58

Query: 86  DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
             P       +    A   ++  K ++  +  E   T Y E K  DY       S   + 
Sbjct: 59  TDP--KYLV-AQYEIALALFADNKKEELLNHLE---TLYKEDKMKDYP------SLYTLF 106

Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNS 172
                D++      +  +   +  +NS
Sbjct: 107 GTYYSDEKEYDKAEKIFNEGAQYLSNS 133


>gi|77919468|ref|YP_357283.1| TPR repeat-containing protein [Pelobacter carbinolicus DSM 2380]
 gi|77545551|gb|ABA89113.1| TPR repeat protein [Pelobacter carbinolicus DSM 2380]
          Length = 594

 Score = 35.5 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 9/67 (13%), Positives = 29/67 (43%), Gaps = 3/67 (4%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D  +++ ++   ++   +Q +++A   F +       +     +     ++ Y  G+ ++
Sbjct: 340 DPSHEQGLFYLGLVHENQQQWTEAIATFEKVPDT---SDFFLDATSHLGYLYYRQGQLEK 396

Query: 113 AASLGEE 119
           A  + EE
Sbjct: 397 AIQVLEE 403


>gi|282880620|ref|ZP_06289326.1| tetratricopeptide repeat protein [Prevotella timonensis CRIS 5C-B1]
 gi|281305515|gb|EFA97569.1| tetratricopeptide repeat protein [Prevotella timonensis CRIS 5C-B1]
          Length = 594

 Score = 35.5 bits (81), Expect = 8.4,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 46/146 (31%), Gaps = 31/146 (21%)

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
            A  Q   GK   A  L ++ +  +P+       Y+L G  YA    D         L L
Sbjct: 58  QAVCQQLNGKNDLAFDLLKQCLAIHPQ---AAEAYFLQGQLYANQRNDS--------LAL 106

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
           Q   +      N+   +                   + +YY+  G Y  AI  ++ +   
Sbjct: 107 QNFEKAASLQPNNTDYQE-----------------RVAQYYIGTGAYEKAITAYEQI--- 146

Query: 220 YSDAEHAEEAMARLVEAYVALALMDE 245
           Y       + +  L + Y      D+
Sbjct: 147 YESHHERSDVLNILAQLYNQQKDYDK 172


>gi|218513248|ref|ZP_03510088.1| putative exported protein, TonB-dependent receptor [Rhizobium etli
           8C-3]
          Length = 334

 Score = 35.5 bits (81), Expect = 8.4,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 29/84 (34%), Gaps = 6/84 (7%)

Query: 39  ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
            +++ R++      D  +   +  +   +L+     K+ E     S   P      +S L
Sbjct: 24  MKEAKREIDTAIALDPSFDIALLVRGRYYLQSGERDKSLEDLLAASTANPAHS---QSQL 80

Query: 99  MSAFVQYSAGK---YQQAASLGEE 119
           M A   Y  G     QQA    + 
Sbjct: 81  MLAAAHYEKGDRIPSQQALDNADR 104


>gi|254475542|ref|ZP_05088928.1| tetratricopeptide TPR_2 [Ruegeria sp. R11]
 gi|214029785|gb|EEB70620.1| tetratricopeptide TPR_2 [Ruegeria sp. R11]
          Length = 224

 Score = 35.5 bits (81), Expect = 8.4,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 27/75 (36%), Gaps = 14/75 (18%)

Query: 62  EKAVLFLKEQ-------NFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQ 112
           E+A   L +        +F  A +  ++     P +A    +++     FVQY    +  
Sbjct: 91  EQAQALLDQGMSRRAVFDFLGALQALDRLVAYCPDYAEGYNQRA-----FVQYLRRDFSA 145

Query: 113 AASLGEEYITQYPES 127
           A +  +  +   P  
Sbjct: 146 ALADLDRALALTPTH 160


>gi|187918198|ref|YP_001883761.1| hypothetical protein BH0326 [Borrelia hermsii DAH]
 gi|119861046|gb|AAX16841.1| hypothetical protein BH0326 [Borrelia hermsii DAH]
          Length = 952

 Score = 35.5 bits (81), Expect = 8.4,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 1/68 (1%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
             V      Y+ A+L  KE N+  A  YF +      FA  + K L   A V Y  G ++
Sbjct: 766 EGVNSPNVYYKLALLNYKENNYKDALVYFFKVEDMSGFAN-SNKVLNSIASVLYKMGNFE 824

Query: 112 QAASLGEE 119
            A S    
Sbjct: 825 AARSYYLR 832


>gi|124514224|gb|EAY55739.1| putative TPR-domain containing protein [Leptospirillum rubarum]
          Length = 254

 Score = 35.5 bits (81), Expect = 8.4,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 24/78 (30%), Gaps = 11/78 (14%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           G Y+ A     E I   P        YY +G  Y ++              L     +V 
Sbjct: 187 GDYKGALEEFSEVIRLAPRFPRS---YYELGRVYLKLENQ--------NKALLAFKEVVR 235

Query: 168 RYTNSPYVKGARFYVTVG 185
              +SP    AR Y+   
Sbjct: 236 LDPDSPESVKARQYIKKL 253


>gi|124008880|ref|ZP_01693567.1| tetratricopeptide repeat domain protein [Microscilla marina ATCC
           23134]
 gi|123985568|gb|EAY25460.1| tetratricopeptide repeat domain protein [Microscilla marina ATCC
           23134]
          Length = 941

 Score = 35.5 bits (81), Expect = 8.4,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 24/59 (40%), Gaps = 3/59 (5%)

Query: 64  AVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVAR--KSLLMSAFVQYSAGKYQQAASLGEE 119
             + L ++ ++KA+++F +           A   ++ +      YS   Y QA    E+
Sbjct: 414 GRVALLQKQYTKAHDFFEKALKMREAMGEKAMSAEAQINLGMAYYSQKNYSQAQQCLEK 472


>gi|313199914|ref|YP_004038572.1| hypothetical protein MPQ_0147 [Methylovorus sp. MP688]
 gi|312439230|gb|ADQ83336.1| Tetratricopeptide TPR_2 repeat protein [Methylovorus sp. MP688]
          Length = 500

 Score = 35.5 bits (81), Expect = 8.5,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 36/110 (32%), Gaps = 17/110 (15%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL-LMSAFVQYSAGKYQQAASLGEEYI 121
           + +   K + F +A           P       +L L  A     AG  + A +  ++ I
Sbjct: 93  RGLALQKARRFDEAIAALQTAIELEPDQP----ALYLNLANTLADAGDAELALAFYDQII 148

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            QYP             ++      ++  DQ    L +Q  +  + R  +
Sbjct: 149 AQYPS-----------ALA-FNNRGNLHLDQGRFALAMQDFNEAIARQPD 186


>gi|226315411|ref|YP_002775307.1| hypothetical protein BBR47_58260 [Brevibacillus brevis NBRC 100599]
 gi|226098361|dbj|BAH46803.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 629

 Score = 35.5 bits (81), Expect = 8.5,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 51/160 (31%), Gaps = 31/160 (19%)

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
            +A+      + + A       I  + +  ++     L+G  Y Q I D+          
Sbjct: 228 DTAYQALKENQLELANPSLNAAIALFADDPDL---LRLLG-EYCQRIGDMDG-------A 276

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
           +   SRI+    ++     AR Y+                 +     +  A+   + +L 
Sbjct: 277 IDAFSRIISLQPDTIDNYVARAYI-----------------WYNHQHFTEALNECEYIL- 318

Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
             S   +  EA++ L +  + L     A+     +    P
Sbjct: 319 --SQVPNHAEALSLLGKCQLELGDAALAKATFQQLLAANP 356


>gi|220907483|ref|YP_002482794.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC
           7425]
 gi|219864094|gb|ACL44433.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425]
          Length = 264

 Score = 35.5 bits (81), Expect = 8.5,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 49/166 (29%), Gaps = 19/166 (11%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-- 88
           A+             V       +     + EK     ++    +A + F +  +  P  
Sbjct: 36  ALATTTAKNNLPEGSVANAESQKIAMANNLLEKGKKAQEKGQHQEAIKAFQRSVKLNPDN 95

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR-- 146
            +G    S       Q+ AG+ + A +  +  + + P   ++  +   +GM+Y    R  
Sbjct: 96  LSGYQLLSE-----AQFQAGEQEAAIATLQTALKRKPN--DIA-MLNTLGMAYLSSDRLT 147

Query: 147 -------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
                   V   Q + K     +S + +R                 
Sbjct: 148 EAERILSQVTDLQPSNKTAYFSLSLVQQRLRQFERAIENAQRAAKL 193


>gi|254411761|ref|ZP_05025537.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC
           7420]
 gi|196181483|gb|EDX76471.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC
           7420]
          Length = 1282

 Score = 35.5 bits (81), Expect = 8.5,   Method: Composition-based stats.
 Identities = 9/76 (11%), Positives = 28/76 (36%), Gaps = 7/76 (9%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF-PFAGVARKS----LLMSAFV 103
            +   V+ + ++Y++     ++ ++ +A   F Q           A +      +   + 
Sbjct: 467 KAPLPVKREVQLYQEGRQLSQKGDYQEALGKFQQVLVIHQENGNKAEEGTTLNQIGLVYS 526

Query: 104 QYSAGKYQQAASLGEE 119
               G+Y +A    ++
Sbjct: 527 N--VGEYAKALDFYQQ 540


>gi|118095271|ref|XP_426710.2| PREDICTED: similar to PXR2a [Gallus gallus]
          Length = 614

 Score = 35.5 bits (81), Expect = 8.5,   Method: Composition-based stats.
 Identities = 14/120 (11%), Positives = 32/120 (26%), Gaps = 14/120 (11%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           +E+ +  +KE +      Y        P    A +  L            Q A    +  
Sbjct: 318 FEEGLKKMKEGDLPVTILYLEAAILQEPNDAEAWQ-FLGITQA--ENENEQAAIVALQRC 374

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +   P +           +SY              +   Q +   +++     Y+  ++ 
Sbjct: 375 LELQPNNLKALMAL---AVSYTNT--------GHQQEAYQALRNWIKQNPKYKYIAKSKK 423


>gi|116754747|ref|YP_843865.1| TPR repeat-containing protein [Methanosaeta thermophila PT]
 gi|116666198|gb|ABK15225.1| Tetratricopeptide TPR_2 repeat protein [Methanosaeta thermophila
           PT]
          Length = 244

 Score = 35.5 bits (81), Expect = 8.5,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 38/113 (33%), Gaps = 11/113 (9%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           KA        +S+A E   +     PF     +S ++  F  +S G+Y++A    +  I 
Sbjct: 79  KAAALNNLDRYSEALEACKRALELDPFNS---RSWIVKGFAHHSLGEYEEAVKSYDRAIE 135

Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
             P  ++    +   G +   + R         +  L+     +       Y 
Sbjct: 136 LDPMGQDARRAWNNRGAALDNLGRH--------EDALRSYDEAIMLEPFDAYA 180


>gi|71001670|ref|XP_755516.1| transcriptional corepressor Cyc8 [Aspergillus fumigatus Af293]
 gi|66853154|gb|EAL93478.1| transcriptional corepressor Cyc8, putative [Aspergillus fumigatus
           Af293]
 gi|159129583|gb|EDP54697.1| transcriptional corepressor Cyc8, putative [Aspergillus fumigatus
           A1163]
          Length = 867

 Score = 35.5 bits (81), Expect = 8.5,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 46/143 (32%), Gaps = 22/143 (15%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108
            D    +  Y     ++ +  + KAYE + Q        P              + Y   
Sbjct: 297 ADNTDAQSWYLLGRCYMSQAKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIN 350

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +Y+ A       I   P    +  V+Y +G +  +   +   D       L    R  + 
Sbjct: 351 QYRDALDAYSRAIRLNP---YISEVWYDLG-TLYESCNNQIAD------ALDAYGRAADL 400

Query: 169 YTNSPYVKGARFYVTVGRNQLAA 191
              + ++   +  + + ++QL+ 
Sbjct: 401 DPTNVHI---KARLQLLQSQLSG 420


>gi|59799373|gb|AAX07236.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 132 [Homo sapiens]
          Length = 690

 Score = 35.5 bits (81), Expect = 8.6,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|302344515|ref|YP_003809044.1| hypothetical protein Deba_3097 [Desulfarculus baarsii DSM 2075]
 gi|301641128|gb|ADK86450.1| Tetratricopeptide TPR_2 repeat protein [Desulfarculus baarsii DSM
           2075]
          Length = 803

 Score = 35.5 bits (81), Expect = 8.6,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 63/176 (35%), Gaps = 34/176 (19%)

Query: 95  KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
           ++ L      + AGK+++A+      I    +   +   +Y +G++Y ++   V      
Sbjct: 37  QAFLAKGKAYFEAGKFKEASVELRNAIK---DDPRLADAHYYLGLTYLKLGDPV------ 87

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
                + +  +V+   N+     A+  +    + LA           +RG+   A     
Sbjct: 88  --QAYRVLFNVVQLDDNN---LDAKIKLGQ-VSLLA-----------RRGD--EAAELAN 128

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
            VL          +A+  L +AY +    D+A E V  + +          V  L+
Sbjct: 129 NVLKRQPK---NIDALILLGQAYSS---QDKAEEAVRALGQAKQLDPKRSDVYVLL 178


>gi|298373391|ref|ZP_06983380.1| sensor histidine kinase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298274443|gb|EFI15995.1| sensor histidine kinase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 602

 Score = 35.5 bits (81), Expect = 8.6,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 75/249 (30%), Gaps = 58/249 (23%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV------YEKAVLFLKEQNFSK 75
           F L I   IA   + G   +  +  +  S+     ++ +      Y+ A+ + ++ N   
Sbjct: 5   FTLIISLLIANTTVYGQSAEMKK--HFASIEAAEREQNLAKACSEYKAAINYCRQNN--- 59

Query: 76  AYEYFNQCSRDFPFAGVARKSLLMSAFV---QYSAGKYQQAASLG-EEYITQY--PE-SK 128
                               + L+  +     Y AG Y +A +   E     +  P   K
Sbjct: 60  --------EDQH------HLTNLLLGYCIILSY-AGDYSKAIATLNEAAERNHRQPTPDK 104

Query: 129 NVDYVYYLV-GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP-YVKGARFYVTVGR 186
            ++   Y+  G+      R                   +  Y  S       +  + +  
Sbjct: 105 EIEAKIYMQFGVINFFQKR---------------FDDALFYYRKSEAIAVSTKNKMGI-- 147

Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL---ANYSDAEHAEEAMARLVEAYVALALM 243
             +A     I   Y K+GEY  AI  ++  +       D          L   Y  L++ 
Sbjct: 148 -SIAKN--NIANVYQKKGEYRQAIDSYRKCIKLQEELQDTATLANTYFNLGSCYEELSIQ 204

Query: 244 DEAREVVSL 252
           D A+    L
Sbjct: 205 DRAKAYYKL 213


>gi|297691647|ref|XP_002823258.1| PREDICTED: RNA polymerase II-associated protein 3-like [Pongo
           abelii]
          Length = 619

 Score = 35.5 bits (81), Expect = 8.6,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 46/143 (32%), Gaps = 21/143 (14%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           D +    + EK   + K+  + +A + + +     P+  V        A   +   K+  
Sbjct: 129 DSQKALVLKEKGNKYFKQGKYDEAIDCYTKGMDADPYNPVLPT---NRASAYFRLKKFAV 185

Query: 113 AASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
           A S     I       N  Y   Y   G +   + +         +   +   R++E   
Sbjct: 186 AESDCNLAIAL-----NRSYTKAYSRRGAARFALQK--------LEEAKKDYERVLELEP 232

Query: 171 NSPYVKGARFYVTVGRNQLAAKE 193
           N+     A   +      LA+KE
Sbjct: 233 NN---FEATNELRKISQALASKE 252


>gi|260428873|ref|ZP_05782850.1| tetratricopeptide repeat domain protein [Citreicella sp. SE45]
 gi|260419496|gb|EEX12749.1| tetratricopeptide repeat domain protein [Citreicella sp. SE45]
          Length = 488

 Score = 35.5 bits (81), Expect = 8.6,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 26/63 (41%), Gaps = 5/63 (7%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            + V       + +A  YFN+  R      V R   ++  +   ++G+  +AA+   E+ 
Sbjct: 414 ARGVAAYNRGEYRRAIGYFNEYERL--TGRVRRDLAMLRGYAYLNSGQKAKAAA---EFQ 468

Query: 122 TQY 124
             +
Sbjct: 469 RLH 471


>gi|166714252|ref|ZP_02245459.1| polysaccharide deacetylase [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 900

 Score = 35.5 bits (81), Expect = 8.6,   Method: Composition-based stats.
 Identities = 18/126 (14%), Positives = 39/126 (30%), Gaps = 18/126 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           E+ +   KE+ ++ A E F +  +    A  A  +     FV +  G++ ++A   E  +
Sbjct: 791 ERGLQLYKEKRYADAAEQFAEALKLC--ADFA-LAANNLGFVYFRQGRFAESARRLETTL 847

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPY--DQRATKLMLQYMSRIVERYTNSPYVKGAR 179
              P             ++Y  +        D+   +        +            AR
Sbjct: 848 KIDPS----------RAVAYLNLGDAYANAGDREKARKAYSTYLELQ---PQGSGAAQAR 894

Query: 180 FYVTVG 185
             +   
Sbjct: 895 AQLQSL 900


>gi|161503186|ref|YP_001570298.1| tetratricopeptide repeat protein [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160864533|gb|ABX21156.1| hypothetical protein SARI_01254 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 389

 Score = 35.5 bits (81), Expect = 8.6,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
           A   + +GR Y+ +G+Y  A+   Q V+    D E   E +  L   Y  L    E
Sbjct: 214 ARVSIMMGRVYMAKGDYAKAVESLQRVIV--QDKELVSETLEMLQTCYQQLGKNAE 267


>gi|150403612|ref|YP_001330906.1| hypothetical protein MmarC7_1699 [Methanococcus maripaludis C7]
 gi|150034642|gb|ABR66755.1| TPR repeat-containing protein [Methanococcus maripaludis C7]
          Length = 409

 Score = 35.5 bits (81), Expect = 8.6,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 28/73 (38%), Gaps = 10/73 (13%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEEYITQYPESK 128
            N+ ++ E F++              L+     ++ Y   KY +A    ++ +      +
Sbjct: 140 GNYDESVEAFDK-----STGNYEEIVLIWNELGYIYYQNEKYDKAIECFDKALAL---DR 191

Query: 129 NVDYVYYLVGMSY 141
           N+ Y +   G+ Y
Sbjct: 192 NLKYSFNGKGLCY 204


>gi|124515767|gb|EAY57276.1| probable cellulose synthase subunit C [Leptospirillum rubarum]
 gi|206602272|gb|EDZ38754.1| Probable cellulose synthase subunit C [Leptospirillum sp. Group II
           '5-way CG']
          Length = 335

 Score = 35.5 bits (81), Expect = 8.6,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 3/66 (4%)

Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
             Y+ K      A   ++ +L  Y      +EA+  L++AY+     D AR ++   ++R
Sbjct: 49  ALYWEKHHRVDLAAATYRQILFLYPG---DKEALIGLIQAYLLEGKSDRARPLIRTFEKR 105

Query: 257 YPQGYW 262
           YP+  +
Sbjct: 106 YPRSPY 111


>gi|157827192|ref|YP_001496256.1| TPR repeat-containing protein [Rickettsia bellii OSU 85-389]
 gi|157802496|gb|ABV79219.1| Tetratricopeptide repeat-containing protein [Rickettsia bellii OSU
            85-389]
          Length = 1359

 Score = 35.5 bits (81), Expect = 8.6,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 46/143 (32%), Gaps = 20/143 (13%)

Query: 115  SLGEEYITQYP-ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
               + +   YP     +  +   +G+SY         D       L Y    +E Y  + 
Sbjct: 1004 EALKMFQELYPSNHSYIAALLNSIGLSY--------KDLGNPAKALIYYKGALEIY-QTL 1054

Query: 174  YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS-----DAEHAEE 228
            Y +    ++    N        IG  Y K G     +   + VL  Y      +  +   
Sbjct: 1055 Y-QDNPLHIVSMLNTFN----SIGAAYYKLGNTSEGLKYLKYVLEMYKALYQNNNPYIAS 1109

Query: 229  AMARLVEAYVALALMDEAREVVS 251
            A+  + EAY  L  + +  E + 
Sbjct: 1110 ALNNVGEAYKGLGNISKGLEYLE 1132


>gi|255034942|ref|YP_003085563.1| hypothetical protein Dfer_1149 [Dyadobacter fermentans DSM 18053]
 gi|254947698|gb|ACT92398.1| hypothetical protein Dfer_1149 [Dyadobacter fermentans DSM 18053]
          Length = 567

 Score = 35.5 bits (81), Expect = 8.6,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 45/131 (34%), Gaps = 21/131 (16%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A+   K+  ++ A + F   +        +  +    A   Y+  +Y+ +  +  + 
Sbjct: 31  YRSALADFKQGKYAVAMDKFYSMTSVNAKTAYSPYAHYYYALSAYNLKRYKDSRQMLLQL 90

Query: 121 ITQYPESKNVDYVYYLVGMSYAQM--------------IRDVPYDQRATKL----MLQYM 162
            ++YP    ++ VYYL+G    +                  +  D +A K      +   
Sbjct: 91  QSRYPGWNKINDVYYLLGAVNFENGQIGEGLEQLARIKDSSLNKDVQALKQHHLGAISDF 150

Query: 163 ---SRIVERYT 170
                + ++Y 
Sbjct: 151 LKLKDLQKQYP 161


>gi|254521139|ref|ZP_05133194.1| hypothetical protein SSKA14_261 [Stenotrophomonas sp. SKA14]
 gi|219718730|gb|EED37255.1| hypothetical protein SSKA14_261 [Stenotrophomonas sp. SKA14]
          Length = 205

 Score = 35.5 bits (81), Expect = 8.6,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 35/113 (30%), Gaps = 19/113 (16%)

Query: 21  KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
            FAL +F  +A C                    V ++  +   A   +       A   F
Sbjct: 12  MFALMMFSGLAACASA-----------PKKAEVVPFETTL-SNAEAQVTAGGADAAISAF 59

Query: 81  NQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
              ++  P       R + L     Q+  G+Y +A    EE + + P     D
Sbjct: 60  EVAAKADPTRKEPWVRIAQL-----QFDQGQYARAIVAAEEVLQRDPNDLVAD 107


>gi|12853209|dbj|BAB29682.1| unnamed protein product [Mus musculus]
          Length = 406

 Score = 35.5 bits (81), Expect = 8.6,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 48/129 (37%), Gaps = 23/129 (17%)

Query: 2   SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY 61
              L  A+       +++   AL  F   A+C           DV LD   +      +Y
Sbjct: 155 EKDLTIALGRASLAMHRM-NLALAYFEK-AIC-----------DVILDKGHNTSELISLY 201

Query: 62  EK-AVLFLKEQNFSKAYEYFNQCSRDF--PFAGVARK-----SLLMSAFVQYSAGKYQQA 113
           E+ A +    +N  +A +Y  Q        F+ V+ +     +LL  A+    A +Y+ A
Sbjct: 202 EEIAQIEQLRKNHKQAIQYLQQAYSICVSSFSEVSPQTAEASALLAKAYAMSGASEYRDA 261

Query: 114 ASLGEEYIT 122
             +   +I 
Sbjct: 262 VEIY--FIR 268


>gi|23099925|ref|NP_693391.1| hypothetical protein OB2470 [Oceanobacillus iheyensis HTE831]
 gi|22778156|dbj|BAC14426.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 329

 Score = 35.5 bits (81), Expect = 8.6,   Method: Composition-based stats.
 Identities = 34/240 (14%), Positives = 77/240 (32%), Gaps = 38/240 (15%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
            +  +  Y   +  +      Y K V   K++ F  A ++  +     P   +  K  L 
Sbjct: 3   SKGKKAEYNKVIPFIPEGDFYYTKGVEAFKKRKFDIAIKWMKKAMEQKPKDPL-YKCQLS 61

Query: 100 SAF----VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
             +      + A +         +YI            YYL+  +YA +           
Sbjct: 62  IIYTEVGAYHKANQLLTEVLQSSDYID----------CYYLIANNYAHL--------GLL 103

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV------------EIGRYYLKR 203
               +Y    +++  +  + + A   + + +      ++            E   Y+++ 
Sbjct: 104 YDARKYAQFYLDKEPDGDFSEDANRLLELIQIDEDIDDLDLEDEDELLIFQETAFYHMEN 163

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
            E+  AIP  + ++  + D      A     +A       +EA ++   I E  P   ++
Sbjct: 164 SEWTKAIPIIEEMIELFPDHIL---AKHDYAQAIFYTGKQNEAIQIEKDILEEDPNSLYS 220


>gi|315225372|ref|ZP_07867186.1| conserved hypothetical protein [Capnocytophaga ochracea F0287]
 gi|314944645|gb|EFS96680.1| conserved hypothetical protein [Capnocytophaga ochracea F0287]
          Length = 918

 Score = 35.5 bits (81), Expect = 8.7,   Method: Composition-based stats.
 Identities = 9/68 (13%), Positives = 21/68 (30%), Gaps = 1/68 (1%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +    ++E  +++A       +           ++           +Y +A       
Sbjct: 384 YNRGQQLVQEGRYTEAIPDLQFVASQ-TDLDWRENAISTLYGAYLQNKEYDKALEQANAL 442

Query: 121 ITQYPESK 128
              YP+SK
Sbjct: 443 TELYPKSK 450


>gi|288958720|ref|YP_003449061.1| tetratricopeptide TPR_2 [Azospirillum sp. B510]
 gi|288911028|dbj|BAI72517.1| tetratricopeptide TPR_2 [Azospirillum sp. B510]
          Length = 185

 Score = 35.5 bits (81), Expect = 8.7,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 28/101 (27%), Gaps = 15/101 (14%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLGEEY 120
             V  L   ++  A   F+      P +A    +++        Y  G Y+ A       
Sbjct: 71  AGVADLSHDDYESALRAFDSVVARDPSYAEGWNKRAA-----AHYMLGDYRAAMLDLRRA 125

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           ++  P           +G+ Y  +  D     +        
Sbjct: 126 LSLEPRHFG---ALVELGLVYLALGDD-----QPALRAFDA 158


>gi|281420004|ref|ZP_06251003.1| hypothetical protein PREVCOP_03862 [Prevotella copri DSM 18205]
 gi|281405804|gb|EFB36484.1| hypothetical protein PREVCOP_03862 [Prevotella copri DSM 18205]
          Length = 373

 Score = 35.5 bits (81), Expect = 8.7,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 60/158 (37%), Gaps = 26/158 (16%)

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT-----KLMLQYMSRIVERYTN 171
            + Y+  Y   K+ D  +    M++ ++++    D         K  LQ     +++Y N
Sbjct: 132 LQSYLDTY---KDADEAHRDSIMAHLELLKQTDQDWTNAVVSGSKEALQAY---LDKYPN 185

Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
           SP+ +     +      +A     +  Y      Y+AA          ++D  H E+A  
Sbjct: 186 SPHKQEVLNKIDSIDWNVAKNADNVEAY----QAYLAA----------HADGSHIEQAEN 231

Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
            + +A     L  E +++VS +   + Q    R  + L
Sbjct: 232 AMKKAKSR-DLQPEEKDMVSSLFRHFFQSINTRDADGL 268


>gi|260794569|ref|XP_002592281.1| hypothetical protein BRAFLDRAFT_71022 [Branchiostoma floridae]
 gi|229277497|gb|EEN48292.1| hypothetical protein BRAFLDRAFT_71022 [Branchiostoma floridae]
          Length = 1381

 Score = 35.5 bits (81), Expect = 8.7,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 51/139 (36%), Gaps = 35/139 (25%)

Query: 106  SAGKYQQAASLGEEYITQ----Y---PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
            + G Y++A S  EE +      Y       ++     ++G+++ ++           +  
Sbjct: 1010 NLGDYRKAISYHEEALQMSRSKYGESTTHPDIAVALNMLGLAWYRLDD--------YRKA 1061

Query: 159  LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
              Y  + ++ +  S + +      TV    +A     +G  + K G+YV AI        
Sbjct: 1062 FSYFQQALKMH-KSIHGQ------TVAHPHIAMSLTNMGLVWEKLGDYVKAI-------- 1106

Query: 219  NYSDAEHAEEAMARLVEAY 237
                  + E+A+  L   Y
Sbjct: 1107 -----SYQEQALQMLRRIY 1120


>gi|157370890|ref|YP_001478879.1| tetratricopeptide repeat-containing protein [Serratia
           proteamaculans 568]
 gi|157322654|gb|ABV41751.1| Tetratricopeptide TPR_2 repeat protein [Serratia proteamaculans
           568]
          Length = 389

 Score = 35.5 bits (81), Expect = 8.7,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 25/66 (37%), Gaps = 2/66 (3%)

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                   Q A   + +GR Y+ +GEY  A+     VL    D E   E +  L E Y  
Sbjct: 204 KRAASADKQCARVSIMVGRIYMAQGEYAKAVESLTRVLN--QDKELVSETLPMLHECYQH 261

Query: 240 LALMDE 245
           L    +
Sbjct: 262 LEQQQD 267


>gi|90581672|ref|ZP_01237461.1| hypothetical Zn-dependent protease [Vibrio angustum S14]
 gi|90437156|gb|EAS62358.1| hypothetical Zn-dependent protease [Vibrio angustum S14]
          Length = 485

 Score = 35.5 bits (81), Expect = 8.7,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 5/84 (5%)

Query: 48  LDSVTDVRYQREVYEKAVLFL--KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
           LD +         Y  A   L   ++ + +A        ++ P + V R   +  A    
Sbjct: 331 LDPLIAGEPDNMFYIDAATDLDLNQKQYQRAISRLVNAQKNNPDSSVLR---INLANAYL 387

Query: 106 SAGKYQQAASLGEEYITQYPESKN 129
            AGKYQQ+  +   Y   +P+  N
Sbjct: 388 EAGKYQQSIKILNRYTYDHPDDTN 411


>gi|332527457|ref|ZP_08403511.1| TPR domain-containing protein [Rubrivivax benzoatilyticus JA2]
 gi|332111866|gb|EGJ11844.1| TPR domain-containing protein [Rubrivivax benzoatilyticus JA2]
          Length = 152

 Score = 35.5 bits (81), Expect = 8.8,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 23/85 (27%), Gaps = 11/85 (12%)

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
           +A   +  G+Y  A       I   P+  +  Y  Y   +SY  +   V           
Sbjct: 69  TARTLHEMGRYSDAIEAMTSGI---PKQPDYGYALYQRALSYEALGDRV--------QAK 117

Query: 160 QYMSRIVERYTNSPYVKGARFYVTV 184
           +   R  E      Y       +  
Sbjct: 118 RDFFRAAELVPKEGYEPKVAAKLIE 142


>gi|313675403|ref|YP_004053399.1| transcriptional regulator, arac family [Marivirga tractuosa DSM
           4126]
 gi|312942101|gb|ADR21291.1| transcriptional regulator, AraC family [Marivirga tractuosa DSM
           4126]
          Length = 692

 Score = 35.5 bits (81), Expect = 8.8,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 54/141 (38%), Gaps = 29/141 (20%)

Query: 136 LVGMS-YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
           L+  S Y   I+D        +   + +  ++E Y N          V    N L+  ++
Sbjct: 391 LIANSLYFMQIKDF-------RKAEEALLEVLEYYPN----------VAWIHNFLS--DI 431

Query: 195 EIGRYYL--KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV--EAYVALALMDEAREVV 250
                Y+     +Y+  I   Q +    SD +    ++  L    A V    +DEA + +
Sbjct: 432 YA---YMLPNTKKYL--IHALQGIEVAISDKDSVSASITYLHLSNALVQSGFVDEAEKYI 486

Query: 251 SLIQERYPQGYWARYVETLVK 271
              +   PQ ++++Y+   +K
Sbjct: 487 KKSKAYNPQNHYSKYLHEYIK 507


>gi|291563750|emb|CBL42566.1| hypothetical protein CK3_31190 [butyrate-producing bacterium SS3/4]
          Length = 434

 Score = 35.5 bits (81), Expect = 8.8,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 25/73 (34%), Gaps = 11/73 (15%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           G Y  A      Y+    ++     V Y +GM Y             T    Q   +++ 
Sbjct: 369 GDYDSALRYYGRYMEFNDKNPE---VIYNMGMVYKAK--------GDTDNANQMFGQVIM 417

Query: 168 RYTNSPYVKGARF 180
            + +S + + A+ 
Sbjct: 418 NFADSEFAEKAKE 430


>gi|237746198|ref|ZP_04576678.1| predicted protein [Oxalobacter formigenes HOxBLS]
 gi|229377549|gb|EEO27640.1| predicted protein [Oxalobacter formigenes HOxBLS]
          Length = 214

 Score = 35.5 bits (81), Expect = 8.8,   Method: Composition-based stats.
 Identities = 12/84 (14%), Positives = 26/84 (30%), Gaps = 17/84 (20%)

Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV--------------YEKA 64
          +  F   +  S+A   LVG     S  +  ++        ++              +  A
Sbjct: 1  MKGFLTVVLMSVA---LVGCNGAESEKLKAENAALKSQVEKLESENNKLRETAQYHFRLA 57

Query: 65 VLFLKEQNFSKAYEYFNQCSRDFP 88
             +  +N+S+A          +P
Sbjct: 58 QDHIAAKNWSEAIASLQTVITKYP 81


>gi|228946991|ref|ZP_04109288.1| TPR domain protein [Bacillus thuringiensis serovar monterrey BGSC
           4AJ1]
 gi|228812723|gb|EEM59047.1| TPR domain protein [Bacillus thuringiensis serovar monterrey BGSC
           4AJ1]
          Length = 294

 Score = 35.5 bits (81), Expect = 8.8,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 56/151 (37%), Gaps = 36/151 (23%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
             +++K++ + +A E   +     P    + ++    A   Y+ G+ ++A    E ++  
Sbjct: 75  GDIYMKQKKWEEAKEALQKSISIQP----SDEAYHNVAVAHYNLGELEEA---SEFFLRV 127

Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
              + + DY+ Y    SY + + D+    +  K  L   +R                   
Sbjct: 128 ---AGDSDYIMY----SYVKCLIDLGR-TKEAKEKLDAFNR------------------- 160

Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
              N L   E+ +   Y++   Y  AI  F+
Sbjct: 161 ESDNFLG--EMMVADLYVELNCYKEAIEWFE 189


>gi|218885582|ref|YP_002434903.1| hypothetical protein DvMF_0478 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218756536|gb|ACL07435.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 599

 Score = 35.5 bits (81), Expect = 8.8,   Method: Composition-based stats.
 Identities = 21/163 (12%), Positives = 51/163 (31%), Gaps = 51/163 (31%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEE- 119
           K+ L  +  + + A     +  + +P        ++ L       ++ K + A ++ +E 
Sbjct: 390 KSQLQYESGDLTGALATLKEGQKTYPGQKEFWQMEAQL-----YLNSDKPEAALAVMDEA 444

Query: 120 -----------YIT----------------------QYPESKNVDYVYYLVGMSYAQMIR 146
                      ++                        +P           VG + A+  R
Sbjct: 445 RKFWPDDAEIAFMRGIILDERGQKAEAFTMMEQVIADHPRH---AQALNYVGYTLAEQGR 501

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
           D+          L+ ++R +E   +S Y+  +  +    R +L
Sbjct: 502 DLDR-------ALELITRALEESPDSTYIIDSLAWTHYRRGEL 537


>gi|15639938|ref|NP_219391.1| hypothetical protein TP0954 [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189026177|ref|YP_001933949.1| hypothetical protein TPASS_0954 [Treponema pallidum subsp. pallidum
           SS14]
 gi|3323274|gb|AAC65909.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189018752|gb|ACD71370.1| hypothetical protein TPASS_0954 [Treponema pallidum subsp. pallidum
           SS14]
 gi|291060309|gb|ADD73044.1| putative tetratricopeptide repeat protein [Treponema pallidum
           subsp. pallidum str. Chicago]
          Length = 478

 Score = 35.5 bits (81), Expect = 8.8,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 66/189 (34%), Gaps = 31/189 (16%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           E+   FL   ++++A + F++  R  P    A+ + +    V Y  GK Q+A +   + +
Sbjct: 153 ERGYDFLSVNDYAQAVQAFSRALRVEP---RAQDARVGLGKVYYLQGKMQEAEAQYRQVL 209

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP-------- 173
              PE +          ++    ++            ++ + R+V+   + P        
Sbjct: 210 QDTPEHE--------RALAECARVKAET---NRVLEAIRDLERVVQLDPHDPAYWTDLGT 258

Query: 174 YVKGARFYVTVGRNQLAAK---------EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
           Y+  A            A           + +G  Y + G    AI  +Q  +  Y    
Sbjct: 259 YLSQAGKKERAAAAFERAVALSADAYFAHIYLGGIYDELGRAEKAIEHYQRAVQLYPKYH 318

Query: 225 HAEEAMARL 233
            + E++  L
Sbjct: 319 FSFESLGVL 327


>gi|326485017|gb|EGE09027.1| transcriptional corepressor Cyc8 [Trichophyton equinum CBS 127.97]
          Length = 1175

 Score = 35.5 bits (81), Expect = 8.8,   Method: Composition-based stats.
 Identities = 20/143 (13%), Positives = 42/143 (29%), Gaps = 22/143 (15%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108
            D    +  Y     ++ +  + KAYE + Q        P              + Y   
Sbjct: 357 ADNSDAQSWYLLGRCYMSQAKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIN 410

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +Y+ A       I   P    +  V+Y +G +  +   +   D       L    R  + 
Sbjct: 411 QYRDALDAYSRAIRLNP---YISEVWYDLG-TLYESCNNQTSD------ALDAYGRAADL 460

Query: 169 YTNSPYVKGARFYVTVGRNQLAA 191
              +      +  + + ++  A 
Sbjct: 461 DPTN---VQIKARLQLLQSGQAG 480


>gi|297693599|ref|XP_002824108.1| PREDICTED: intraflagellar transport protein 88 homolog [Pongo
           abelii]
          Length = 840

 Score = 35.5 bits (81), Expect = 8.8,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 65/202 (32%), Gaps = 24/202 (11%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117
            KAV +L+++++++A E      +    + V   +    + + Y    + QA+S      
Sbjct: 433 NKAVTYLRQKDYNQAVEILKVLEKKD--SRVKSAAATNLSALYYMGKDFAQASSYADIAV 490

Query: 118 --EEYITQYP---ESK-NVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
             + Y    P    +K N  +    Y     + +    +  D   T+ +      +    
Sbjct: 491 NSDRY---NPAALTNKGNTVFANGDYEKAAEFYK--EALRNDSSCTEALYNIGKALTYEK 545

Query: 170 TNS--PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
           T S    +      ++      A    +I   Y        AI     V++         
Sbjct: 546 TKSGXMRLWDCFLKLSAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQV- 604

Query: 228 EAMARLVEAYVALALMDEAREV 249
             +++L E Y       +A + 
Sbjct: 605 --LSKLGELYDREGDKSQAFQY 624


>gi|300776063|ref|ZP_07085922.1| hydrolase of the alpha/beta superfamily protein [Chryseobacterium
           gleum ATCC 35910]
 gi|300505196|gb|EFK36335.1| hydrolase of the alpha/beta superfamily protein [Chryseobacterium
           gleum ATCC 35910]
          Length = 391

 Score = 35.5 bits (81), Expect = 8.8,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 27/68 (39%), Gaps = 3/68 (4%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            +A   L+  N + A + F Q  +D P +  A  S    A      G  + A    ++ +
Sbjct: 315 NRAYGQLRAGNINIALDLFQQNVKDHPDSWNAYDS---LAEAYMKKGDRKSAIENYKKSL 371

Query: 122 TQYPESKN 129
              P++ +
Sbjct: 372 QLNPDNAD 379


>gi|188996284|ref|YP_001930535.1| Tetratricopeptide TPR_2 repeat protein [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188931351|gb|ACD65981.1| Tetratricopeptide TPR_2 repeat protein [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 557

 Score = 35.5 bits (81), Expect = 8.8,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 73/200 (36%), Gaps = 42/200 (21%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
             ++ +  N+ KA E +    +D P    A    L   +V      +  AA   ++ I  
Sbjct: 205 GEIYRQSGNYDKAIEIYKNILKDDPNNLEALN-RLFQIYV--DKDDFNNAAETIDKIIRL 261

Query: 124 YPESKNV---DYVYYLV-GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            P+  +     ++ Y+  G S                 +LQ + +  +   ++P++K   
Sbjct: 262 NPKDNDAILKKFLLYIKYGKSN---------------EILQDLKKSSQENPDNPFLK--- 303

Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
                           +G  Y    +Y  A   ++ +   Y      +E + RLV  Y+ 
Sbjct: 304 --------------FMLGMAYETLEDYQNAKAIYEEL---YKQQPDNQELIDRLVSVYLN 346

Query: 240 LALMDEAREVVSLIQERYPQ 259
           L   D+A E+++ +  + P+
Sbjct: 347 LKEYDKALEILNKLYVQNPK 366


>gi|149372358|ref|ZP_01891546.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [unidentified eubacterium SCB49]
 gi|149354748|gb|EDM43311.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [unidentified eubacterium SCB49]
          Length = 631

 Score = 35.5 bits (81), Expect = 8.8,   Method: Composition-based stats.
 Identities = 6/62 (9%), Positives = 14/62 (22%), Gaps = 3/62 (4%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
           KA       N+  A   +    +       +           Y   +Y ++    +    
Sbjct: 28  KADKKFSNWNYIDAVSAYEAVVKS---GYESEDVFQKLGDAYYFNAQYAKSVIYYKRLFK 84

Query: 123 QY 124
             
Sbjct: 85  LN 86


>gi|58332818|ref|NP_001011485.1| DnaJ (Hsp40) homolog, subfamily C, member 3 [Xenopus (Silurana)
           tropicalis]
 gi|57033104|gb|AAH88814.1| DnaJ (Hsp40) homolog, subfamily C, member 3 [Xenopus (Silurana)
           tropicalis]
          Length = 437

 Score = 35.5 bits (81), Expect = 8.8,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 37/108 (34%), Gaps = 4/108 (3%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV-ARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           + A   + E  +  A   +    +  P     +      S      + +  +A  +  E+
Sbjct: 273 QAAEELIHEGRYEDALPKYEGILKTEPNVPYYSALVQERSCHCYSKSQQSTEAIRVCTEF 332

Query: 121 ITQYPESKNV--DYVY-YLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
           + Q P + N   D    Y++   Y + IRD    Q+  +   Q    +
Sbjct: 333 LQQEPNNVNALKDRAEAYILEEMYEEAIRDYETAQQNNENDKQIREGL 380


>gi|114565699|ref|YP_752853.1| hypothetical protein Swol_0127 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|114336634|gb|ABI67482.1| hypothetical protein Swol_0127 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 845

 Score = 35.5 bits (81), Expect = 8.8,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 15/43 (34%), Gaps = 9/43 (20%)

Query: 83  CSRDFPFAGVARK-------SLLMSAFVQYSAGKYQQAASLGE 118
               +P+   + +       + L      Y  G+Y +A +  E
Sbjct: 737 VKAAYPY--WSGQPLELSPAAQLSLGKAYYLLGQYPEARATIE 777


>gi|332881656|ref|ZP_08449304.1| tetratricopeptide repeat protein [Capnocytophaga sp. oral taxon 329
           str. F0087]
 gi|332680295|gb|EGJ53244.1| tetratricopeptide repeat protein [Capnocytophaga sp. oral taxon 329
           str. F0087]
          Length = 982

 Score = 35.5 bits (81), Expect = 8.9,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 38/109 (34%), Gaps = 15/109 (13%)

Query: 69  KEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
           + +N+S A  Y N+     P+      +K  L         G  ++A  L       YP 
Sbjct: 114 ETRNYSSAICYVNELLEINPYWQGLWRKKIEL-----YRKQGNVEEADRLLRRLRQIYPN 168

Query: 127 SKNV--DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
              V  DYV Y +  SY +  +         +  +  +  +VE    + 
Sbjct: 169 DSTVQRDYV-YRLEESYQERRKSGDK-----EKAVALLRDLVEVSPQNE 211


>gi|329954470|ref|ZP_08295561.1| tetratricopeptide repeat protein [Bacteroides clarus YIT 12056]
 gi|328527438|gb|EGF54435.1| tetratricopeptide repeat protein [Bacteroides clarus YIT 12056]
          Length = 91

 Score = 35.5 bits (81), Expect = 8.9,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 34/99 (34%), Gaps = 12/99 (12%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
            L +     + G  +QA    +E +    +    D  YYL G +Y          Q   +
Sbjct: 3   QLNTIKELINQGNVEQAILQLDEILQT--DFPEKDEAYYLRGNAY--------RKQSNWQ 52

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
             L      ++   +SP  + AR  V    N    K++ 
Sbjct: 53  QALNNYQYAIDLNPDSP-ARQARNMVMDILNFF-HKDMY 89


>gi|317062422|ref|ZP_07926907.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
 gi|313688098|gb|EFS24933.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
          Length = 411

 Score = 35.5 bits (81), Expect = 8.9,   Method: Composition-based stats.
 Identities = 12/133 (9%), Positives = 42/133 (31%), Gaps = 24/133 (18%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAF-----VQYSAGKYQQA 113
                   + ++ +A  +F +    ++++        +     +             Q+A
Sbjct: 295 NDGESSFNKGSYVEALVHFEKALEINKNY--------AETKDIYFYMGQSNLQLDNGQKA 346

Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
               ++ +           +YY +G++Y ++           +    Y + + ++Y  S 
Sbjct: 347 IENYKKALDLEKSDDKKAEIYYNMGIAYDKL--------GNKEESRNYFTFVRQKYPKSS 398

Query: 174 YVKGARFYVTVGR 186
           +   +  Y+    
Sbjct: 399 WSTKSSIYLLKLN 411


>gi|307154400|ref|YP_003889784.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC
           7822]
 gi|306984628|gb|ADN16509.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7822]
          Length = 291

 Score = 35.5 bits (81), Expect = 8.9,   Method: Composition-based stats.
 Identities = 7/59 (11%), Positives = 19/59 (32%), Gaps = 3/59 (5%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +     + +  ++  A    ++  +  P       +L       Y   KY +A    ++
Sbjct: 116 FTLGSAYFQRGDYQTAIAQIDKGLKLKPDNP---AALFDLGNSYYKLQKYPKAVEAYQK 171


>gi|253997851|ref|YP_003049914.1| hypothetical protein Msip34_0138 [Methylovorus sp. SIP3-4]
 gi|253984530|gb|ACT49387.1| Tetratricopeptide TPR_2 repeat protein [Methylovorus sp. SIP3-4]
          Length = 500

 Score = 35.5 bits (81), Expect = 8.9,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 36/110 (32%), Gaps = 17/110 (15%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL-LMSAFVQYSAGKYQQAASLGEEYI 121
           + +   K + F +A           P       +L L  A     AG  + A +  ++ I
Sbjct: 93  RGLALQKARRFDEAITALQTAIELEPDQP----ALYLNLANTLADAGDVELALAFYDQII 148

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
            QYP             ++      ++  DQ    L +Q  +  + R  +
Sbjct: 149 AQYPS-----------ALA-FNNRGNLHLDQGRFALAMQDFNEAIARQPD 186


>gi|224094184|ref|XP_002196319.1| PREDICTED: transmembrane and tetratricopeptide repeat containing 3
           [Taeniopygia guttata]
          Length = 914

 Score = 35.5 bits (81), Expect = 8.9,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 75/268 (27%), Gaps = 47/268 (17%)

Query: 1   MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQ-RE 59
           ++  L   I   + +A ++    L ++ ++A        R    D        +R   ++
Sbjct: 505 IAKSLMPQIIPGKKYAARVAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQ 564

Query: 60  VY-EKAVLFLKEQNFSKAYE-YFNQCS-RDFPFAGVARKSLL--MSAFVQYSAGKYQQAA 114
            Y  +  L LK     KA E Y                 + L    A V        +A 
Sbjct: 565 AYISRGELLLKMNKPLKAKEAYLRALELDR-------TNADLWYNLAIVYIELKDPTEAL 617

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
                 +   P  K        + +  + ++     D R      Q +   V+       
Sbjct: 618 KNFNRALELNPTHK--------LALFNSALLMQESGDARLRPEAKQRLLHYVKEEPQ--- 666

Query: 175 VKGARFYVTVGRNQLA---AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
              +  Y  +G   LA    K++E          ++    R Q          +   A+ 
Sbjct: 667 --DSNGYFNLG--MLAMDDKKDLEA-------EAWMKKAIRLQ---------PNFRSALF 706

Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQ 259
            L   Y        A  V+  +   YP 
Sbjct: 707 NLALLYSQTGKELMALPVLEDLLRYYPD 734


>gi|221114901|ref|XP_002156148.1| PREDICTED: similar to nephrocystin 3 [Hydra magnipapillata]
          Length = 1749

 Score = 35.5 bits (81), Expect = 8.9,   Method: Composition-based stats.
 Identities = 44/278 (15%), Positives = 94/278 (33%), Gaps = 55/278 (19%)

Query: 44   RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ-------CSRDFPFAGVARKS 96
            + +  ++         +    + +  +  + +A E F +          D P   +A  +
Sbjct: 871  KKLIFNNKVHSTLSATLNNLGITYYDKGKYDQAIEKFEESLKIKKLIYNDAPHPDIAG-T 929

Query: 97   LLMSAFVQYSAGKYQQAASLGEEYITQ---------YPESK----NVDYVYYLVGMSYAQ 143
            L        + G+Y QA  +  + +           YP+      N+   Y L G  Y Q
Sbjct: 930  LNNLGEAYKNKGRYDQAIKMIHKSLEMKKIIYKEEPYPDIAASLNNLGTAYNLKGQ-YDQ 988

Query: 144  MIRDVPYDQRATKLMLQY---------MSRIVERYTNSPYVKGARFYVTVGRNQ------ 188
             I+         KL+ +          +  + E Y N   +  A   +   ++       
Sbjct: 989  AIKKYKESLEMRKLIFKDEPHPDIVGLLINLAEAYINKGQIDQAYEKIQDSQDMIKLIYK 1048

Query: 189  ------LAAKEVEI-GRYYLKRGEYVAAIPRFQLVLA----NYSDAEHAE--EAMARLVE 235
                  +A   + + G  Y ++G+Y  AI ++Q  L      + +  H +   ++  L E
Sbjct: 1049 DKHHPVIAGS-LNVLGLVYERKGQYDQAIEKYQESLEIRKLIFKNKPHPDIVASLNNLGE 1107

Query: 236  AYVALALMDEA----REVVSLIQERYPQGYWARYVETL 269
            AY      ++A    +E + ++   Y         ++L
Sbjct: 1108 AYRKKGQYEQAMEKYQESLQMLNIIYKDEPHPDIAKSL 1145


>gi|124007854|ref|ZP_01692555.1| conserved TPR domain protein, putative [Microscilla marina ATCC
           23134]
 gi|123986616|gb|EAY26406.1| conserved TPR domain protein, putative [Microscilla marina ATCC
           23134]
          Length = 194

 Score = 35.5 bits (81), Expect = 8.9,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 44/107 (41%), Gaps = 8/107 (7%)

Query: 15  WAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
           W   L  FA  IFF + + F++       R +    +T+   + E Y++ +  + ++ + 
Sbjct: 3   WYQLLLTFAALIFF-LGIYFIIPTVYIGIRLMLGHHITNTMRENEEYKRGIELVDQERYQ 61

Query: 75  KAYEYFNQCSRDFPFA--GVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           +A  +F+      P +    A K+     +  ++     +A    ++
Sbjct: 62  EALRFFDAVLSHHPKSAVAWAHKA-----WCNFAMDNLHEAMYNCDK 103


>gi|86609176|ref|YP_477938.1| TPR domain-containing protein [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86557718|gb|ABD02675.1| TPR domain protein [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 169

 Score = 35.5 bits (81), Expect = 8.9,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 42/147 (28%), Gaps = 12/147 (8%)

Query: 50  SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
           S  ++    + Y++ +  ++  +F  A + F Q     P    AR      A+V   +G 
Sbjct: 19  STPNLLMAHDSYQEGIAAVQAGDFQAAIQAFRQAVAADPTHTEAR---YKLAWVLGMSGY 75

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVG-----MSYAQMIRDVPYDQRATKLMLQYMSR 164
              A +  E  +   P        +Y  G      +  +   D   D    +        
Sbjct: 76  LDPALTELEAVLAADPNHVA---AHYNRGALLLQKAQLEADEDGQIDLAVLQQAEAAFQA 132

Query: 165 IVERYTNSPYV-KGARFYVTVGRNQLA 190
           ++                    RN  A
Sbjct: 133 VMRLDPTDQRAFAFLNLVKRAIRNHQA 159


>gi|47221980|emb|CAG08235.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 500

 Score = 35.5 bits (81), Expect = 8.9,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 41/97 (42%), Gaps = 16/97 (16%)

Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
           Q+  +  ++   + +++  N+ Y +     + +  N         G ++++ G+Y  AI 
Sbjct: 8   QQNYREAIKLYQKALDQIPNT-YKEM---KMKIMENF--------GLFFVRIGQYPKAII 55

Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
            F+ V++   + +        LV  Y A+   +  ++
Sbjct: 56  YFEDVMSQRPNTKTG----YNLVLCYYAIGDKERMKK 88


>gi|17231265|ref|NP_487813.1| serine/threonine kinase [Nostoc sp. PCC 7120]
 gi|17132907|dbj|BAB75472.1| serine/threonine kinase [Nostoc sp. PCC 7120]
          Length = 707

 Score = 35.5 bits (81), Expect = 8.9,   Method: Composition-based stats.
 Identities = 17/129 (13%), Positives = 44/129 (34%), Gaps = 17/129 (13%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y +     + Q +++A E + + +   P +    +        QY   +YQ+A +   + 
Sbjct: 571 YGRGWSQHQNQRYAEAIESYKKAATIKP-SNY--EIWYSLGNSQYILQQYQEAIASYNKA 627

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +   P+       +Y  G +   +        +  K  +    + ++   +  Y +    
Sbjct: 628 VRYRPKHIES---WYSRGNALFSL--------KQYKEAIASYEQAIKHKPD--YSQAINA 674

Query: 181 YVTVGRNQL 189
                + QL
Sbjct: 675 R-DEAQRQL 682


>gi|87310697|ref|ZP_01092825.1| probable BatD [Blastopirellula marina DSM 3645]
 gi|87286678|gb|EAQ78584.1| probable BatD [Blastopirellula marina DSM 3645]
          Length = 953

 Score = 35.5 bits (81), Expect = 8.9,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 38/120 (31%), Gaps = 12/120 (10%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-------YEKAVLFLKEQNFS 74
            A+ +F + A       +   +     D    ++ Q  +       Y KA   L   + +
Sbjct: 657 IAIALFAASANTGFTAEKTPQAEKTAADVKLSLQQQATILSEAGADYTKARD-LAATDSA 715

Query: 75  KAYEYFNQCSRDFPFAGVA----RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
            A + F   +  +     A     +  L      +  G+  QA +  E      P ++ +
Sbjct: 716 TAKQLFETAAGRYQLLVDAGIGNSQLYLNLGNAYFQCGELGQAIANYERGRELDPANQQL 775


>gi|301617155|ref|XP_002938005.1| PREDICTED: intraflagellar transport protein 88 homolog [Xenopus
           (Silurana) tropicalis]
          Length = 826

 Score = 35.5 bits (81), Expect = 9.0,   Method: Composition-based stats.
 Identities = 38/281 (13%), Positives = 78/281 (27%), Gaps = 56/281 (19%)

Query: 8   AICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLF 67
            + +FE    ++   A T    +   FL     Q+     L    D      +  K  + 
Sbjct: 438 TLKMFEKKDSRVKSAAATNLSFLY--FLENDYSQADIYADLAVSADRYNPAALTNKGNID 495

Query: 68  LKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
                + KA EY+      D   +     +L           + ++A      +   +  
Sbjct: 496 FINGEYEKAAEYYKEALRND---SSCTE-ALYNLGLTYKRLNRLEEALDC---FHKLHAI 548

Query: 127 SKNVDYVYYLVGMSY-------------AQMIRDVPYD-------------QRATKLMLQ 160
            +N   V   +   Y              Q+I  VP D             +       Q
Sbjct: 549 LRNSAQVLSQIAALYEMLEDPNQAIEWLMQLISVVPTDAHTLAKLGELYDNEGDKSQAFQ 608

Query: 161 YMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEIGRYYLKR 203
           Y       +               ++ + + A  Y     + +      ++ +   Y + 
Sbjct: 609 YYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCYRRS 668

Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
           G Y  A+  ++ +   + D     E +  LV     + L +
Sbjct: 669 GNYQKALDTYKEIHKKFPD---NVECLRFLVRLCTDIGLKE 706


>gi|255012053|ref|ZP_05284179.1| TPR repeat-containing protein [Bacteroides fragilis 3_1_12]
 gi|313149895|ref|ZP_07812088.1| tetratricopeptide repeat family protein [Bacteroides fragilis
           3_1_12]
 gi|313138662|gb|EFR56022.1| tetratricopeptide repeat family protein [Bacteroides fragilis
           3_1_12]
          Length = 477

 Score = 35.5 bits (81), Expect = 9.0,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 23/65 (35%), Gaps = 3/65 (4%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
           +E Y K     K  +   A E   Q     P +  A K     A + Y   K+ +AA   
Sbjct: 129 KEAYLKFADVYKAASPQLAIEKLEQLKSIDPSSVAADK---KLAEIYYLNNKFDKAAEAY 185

Query: 118 EEYIT 122
             +I 
Sbjct: 186 ARFIN 190


>gi|254442510|ref|ZP_05055986.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
           DG1235]
 gi|198256818|gb|EDY81126.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
           DG1235]
          Length = 592

 Score = 35.5 bits (81), Expect = 9.0,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 69/214 (32%), Gaps = 28/214 (13%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF--VQYSAGKYQQAASLGEEYI 121
           A          +A E        +P +     + L+SA   +  S  K   A    +   
Sbjct: 336 AQATASTGKPKQAIELLVAAETQYPKS-----AELLSALGTLYLSQQKLDSALDAFKRAH 390

Query: 122 TQYPESK----NVDYVYYLV----GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
           +  P +     N+  +        G++Y +    +      +++ L     ++E+  N  
Sbjct: 391 SLNPRNPQANRNLGTLLLARGDKSGLAYTE--NYLVRQPDDSEVALFTARNLLEKQGN-- 446

Query: 174 YVKGARFYVTVGRNQLAA--KEVE--IGRYYLKRGEYVAAIPRFQLVLANYSDA----EH 225
             + A   +    + LA    E+   +   Y +     A+  R    +A+   +      
Sbjct: 447 -PQAAAALLQRSYDSLARPSNELRQLLASSYHQLSNLQASQKRLAPAIASLEQSLTIWPD 505

Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
             EA+A L      L   ++A   +    E  PQ
Sbjct: 506 NYEALANLGMINAQLGNHEKAESYLLQFTEAQPQ 539


>gi|171913931|ref|ZP_02929401.1| TPR repeat [Verrucomicrobium spinosum DSM 4136]
          Length = 468

 Score = 35.5 bits (81), Expect = 9.0,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 37/105 (35%), Gaps = 7/105 (6%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
             +G  + +  D       D  Y   +  +A+L + E +   A   F++  R  P    A
Sbjct: 243 ASLGRTKDAQTDYNQALKIDPAYTPALNNRAMLRVAEGSLKDAIADFSEIIRLRPDNVHA 302

Query: 94  RKSLLMSAFVQYSAGKYQQAASLGEEYITQYP----ESKNVDYVY 134
                  A     AG+ ++A +  +  I   P      KN+   Y
Sbjct: 303 YN---NRAAAYDKAGQPEKALADLDTAIKLAPQDGQTHKNLAIAY 344


>gi|149196452|ref|ZP_01873507.1| hypothetical protein LNTAR_14882 [Lentisphaera araneosa HTCC2155]
 gi|149140713|gb|EDM29111.1| hypothetical protein LNTAR_14882 [Lentisphaera araneosa HTCC2155]
          Length = 462

 Score = 35.5 bits (81), Expect = 9.0,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 18/31 (58%)

Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
          RE+Y +A   L+++N+  A + F  C +  P
Sbjct: 14 RELYNRADEALQQKNYDYAIDLFQNCLKQVP 44


>gi|94499051|ref|ZP_01305589.1| hypothetical protein RED65_09694 [Oceanobacter sp. RED65]
 gi|94428683|gb|EAT13655.1| hypothetical protein RED65_09694 [Oceanobacter sp. RED65]
          Length = 276

 Score = 35.5 bits (81), Expect = 9.0,   Method: Composition-based stats.
 Identities = 7/54 (12%), Positives = 20/54 (37%), Gaps = 4/54 (7%)

Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
            Y +G+ Y         +++  +       +++E +  +   + A   +T   N
Sbjct: 216 LYQLGLIYM----SPNNEKQNIQKATAIFRKLLEEFPETEEFRKAESRLTQIAN 265


>gi|46445679|ref|YP_007044.1| hypothetical protein pc0045 [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|46399320|emb|CAF22769.1| hypothetical protein pc0045 [Candidatus Protochlamydia amoebophila
           UWE25]
          Length = 1153

 Score = 35.5 bits (81), Expect = 9.0,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 40/97 (41%), Gaps = 6/97 (6%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK-SLLMSAFVQYSAGKYQ 111
           D +  + +     +      FS+A EY+ + +R        +K SLL       + G  +
Sbjct: 567 DSKRAKILRNMGQILFSSGMFSEAIEYYEEANRI--GNQDTKKDSLLGLGASYNALGNKK 624

Query: 112 QAASLGEEYITQYPESKN-VDYV--YYLVGMSYAQMI 145
           QA     ++I     SKN +D    YY +G+ Y +  
Sbjct: 625 QAIQNIGKFICLSQTSKNSLDEALGYYNLGLVYKEFD 661


>gi|313673023|ref|YP_004051134.1| hypothetical protein Calni_1060 [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312939779|gb|ADR18971.1| hypothetical protein Calni_1060 [Calditerrivibrio nitroreducens DSM
           19672]
          Length = 126

 Score = 35.5 bits (81), Expect = 9.1,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 28/61 (45%), Gaps = 2/61 (3%)

Query: 39  ERQSSRDVYLDSVTDVRYQRE--VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
             Q ++D    +  D     E  +++ A+  ++++N+ +  E   +    +P + +A  S
Sbjct: 57  AEQVNKDELYWAGKDEVSDEEIGLFKTALDNIEQKNYKEGRENLKKLLDKYPKSALAEDS 116

Query: 97  L 97
           L
Sbjct: 117 L 117


>gi|303311235|ref|XP_003065629.1| TPR Domain containing protein [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240105291|gb|EER23484.1| TPR Domain containing protein [Coccidioides posadasii C735 delta
           SOWgp]
 gi|320039453|gb|EFW21387.1| N-terminal acetyltransferase catalytic subunit [Coccidioides
           posadasii str. Silveira]
          Length = 837

 Score = 35.5 bits (81), Expect = 9.1,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 89/243 (36%), Gaps = 30/243 (12%)

Query: 4   VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVR----YQRE 59
           +  R   + +   ++    AL I + ++          ++ +  L +          +  
Sbjct: 131 IQSRTAMLQQKPGFRQNWTALAIAYHLSGNLSEAENVLTTYEETLKTPPPRTDMEHSEAI 190

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY--SAGKYQQAASLG 117
           +Y+ +++  +  N  KA E+ +       F  +A    +M     Y    G+  +A +  
Sbjct: 191 LYKNSIIA-ESGNIQKALEHLDAVGNQC-FDVLA----VMEMRADYLLKLGRNDEAVAAY 244

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           E  + + PE  +     Y   +  A+ I +  +   A+   +      VE+Y  S     
Sbjct: 245 EALLERNPEDSH-----YYDALLKAKAIDEKDH---ASLKAVYDYW--VEKYPRS----D 290

Query: 178 ARFYVTVGRNQLAAKEV-EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
           A   + +    L   +  + G  YL+R    A    F  + + Y+++    E +  LVE 
Sbjct: 291 APRRIPL--EFLEGDDFRQAGDVYLQRMLRKAIPSTFANIKSLYTNS-WKRETVQELVEG 347

Query: 237 YVA 239
           Y A
Sbjct: 348 YAA 350


>gi|225712088|gb|ACO11890.1| Small glutamine-rich tetratricopeptide repeat-containing protein A
           [Lepeophtheirus salmonis]
          Length = 332

 Score = 35.5 bits (81), Expect = 9.1,   Method: Composition-based stats.
 Identities = 19/151 (12%), Positives = 46/151 (30%), Gaps = 26/151 (17%)

Query: 29  SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSR 85
           S+   F      Q  +     S  D     ++  +    L+ +N  +A + +++      
Sbjct: 58  SLLSLFQSATSHQPLQKKPTPSPEDKERAEQLKAEGNEALRNENAKEAIDKYSKAIEIDG 117

Query: 86  DFPFAGVARKSLL-MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYA 142
                  + +      A        +  A    +  +   P      Y   Y  +G++Y+
Sbjct: 118 -------SNQVFYCNRAAAYSKMDNHYAAIEDCKRALDMCPN-----YGKAYGRMGLAYS 165

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
            + R         K   +   + +E   ++P
Sbjct: 166 AVQRH--------KEAEECFLKALEIEPDNP 188


>gi|218245826|ref|YP_002371197.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC
           8801]
 gi|218166304|gb|ACK65041.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8801]
          Length = 232

 Score = 35.5 bits (81), Expect = 9.1,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 38/127 (29%), Gaps = 24/127 (18%)

Query: 34  FLVGWERQSSRDVYLDSVTDVRYQREV-YEKAVLFL-------------KEQNFSKAYEY 79
            L   + +S       +  +  YQ    ++     L              + ++  A   
Sbjct: 5   ALDCCDSRSPEPPSKAATPNCWYQLTFGFQTGHESLSTEQLRTCIKEKADQADYRCAIAL 64

Query: 80  FNQCSRDFPFA--GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
            +Q     P +      + L+      +  G Y QA +  ++ I   P    +D  Y   
Sbjct: 65  LDQLILRDPESAIDYNNRGLM-----YFKQGDYDQAINDFDQAIALNP---YLDKAYNNR 116

Query: 138 GMSYAQM 144
               A++
Sbjct: 117 ANCQAEL 123


>gi|116626875|ref|YP_829031.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116230037|gb|ABJ88746.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 673

 Score = 35.5 bits (81), Expect = 9.1,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 61/200 (30%), Gaps = 46/200 (23%)

Query: 72  NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK--- 128
           +++ A   F +     P    A +     A    + G   +A +LG   I   P      
Sbjct: 461 DWAGANASFQRARELEPGNAEAIRGAASLAN---NLGHLDEAVALGRRAIEIDPLDSVTY 517

Query: 129 -NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
            N+  V Y  G                 +  +    R +E                    
Sbjct: 518 NNLGIVLYRAG---------------RPEEAVAEFRRALEITPERERT------------ 550

Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
                 + IGR YL +     A+   +++L            +  L  AY AL    E+ 
Sbjct: 551 ----HSM-IGRVYLVQSRPQEAL--AEMLLEKRPAFR-----LFGLGLAYHALGRKQESD 598

Query: 248 EVVSLIQERYPQGYWARYVE 267
             ++ + +++P GY  +  E
Sbjct: 599 ASLAELIQKFPTGYPYQIAE 618


>gi|118377677|ref|XP_001022016.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89303783|gb|EAS01771.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 1639

 Score = 35.5 bits (81), Expect = 9.1,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 50/136 (36%), Gaps = 22/136 (16%)

Query: 71  QNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
             + KA   +     ++     +A+ ++L  A     A ++ QA    ++ +   P++  
Sbjct: 751 GEYDKAISLYTQALEKE---EIIAKVAVLKRAITYLEAKQFDQAKEDLQKILNDDPQNSE 807

Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV-KGARFYVTVGRNQ 188
               YY  GM + +        Q+     +    + ++ + NS      A + ++  + +
Sbjct: 808 ---AYYFKGMLHYK--------QKNLNEAILSFEQAIK-HNNSRKAVTKALYEISKIKIE 855

Query: 189 L-----AAKEVEIGRY 199
           L     A   ++   Y
Sbjct: 856 LRDFYQAYHTLQRADY 871


>gi|109896748|ref|YP_660003.1| TPR repeat-containing protein [Pseudoalteromonas atlantica T6c]
 gi|109699029|gb|ABG38949.1| TPR repeat [Pseudoalteromonas atlantica T6c]
          Length = 917

 Score = 35.5 bits (81), Expect = 9.1,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 28/66 (42%), Gaps = 3/66 (4%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            +A   + ++++  A +  +      P      + L + A +  S G  + AA   + Y+
Sbjct: 167 SQAYKDILDKDYPLALQSLSNIKDSHPDHP---EVLKLLAQLHLSLGDPKAAAQAFDRYV 223

Query: 122 TQYPES 127
           + YP+ 
Sbjct: 224 SLYPDD 229


>gi|332534670|ref|ZP_08410501.1| putative lytic cell-wall binding lipoprotein [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332035882|gb|EGI72364.1| putative lytic cell-wall binding lipoprotein [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 595

 Score = 35.5 bits (81), Expect = 9.1,   Method: Composition-based stats.
 Identities = 44/243 (18%), Positives = 77/243 (31%), Gaps = 42/243 (17%)

Query: 41  QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
            S++ V  + V +    R     A+ +LK  N S+A +Y     R   FA    +     
Sbjct: 8   GSNKPVVENKVNNTGAARTRIALALQYLKTGNNSQA-KY--NLERAAAFAPDLPEVHYSL 64

Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNV--DYVYYLVGMSYAQMIRDVPYDQRATKLM 158
           A+     G+   A    ++ +   P+  N   +Y  +L G      I +           
Sbjct: 65  AYYYQQVGENPLADKAYQKALEIKPDDPNTLNNYGVFLCG------IDEYDRATDQFLKA 118

Query: 159 LQ--YMSRIVERYTN-------SPYVKGARFYVTVGRNQ----------LAAKEVEIGRY 199
           ++     R+ E Y N           + A  Y     N           LA        Y
Sbjct: 119 IEVPSYIRVAESYENLALCAIEFDDFENAESYFQQALNHSSQRTSTLISLA------ALY 172

Query: 200 YLKRGEYVAAIPRFQLVLANYSDA-EHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
           Y K   Y A+      +L  Y      +  A+         +  ++EA ++ + I + Y 
Sbjct: 173 YAKSDLYKAS-----ELLKRYESTGRVSSRALMLSYLVKNRMGRIEEAEKISNTILQTYS 227

Query: 259 QGY 261
              
Sbjct: 228 TSN 230


>gi|291566679|dbj|BAI88951.1| TPR domain protein [Arthrospira platensis NIES-39]
          Length = 729

 Score = 35.5 bits (81), Expect = 9.1,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 36/129 (27%), Gaps = 21/129 (16%)

Query: 60  VYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            Y   +  L ++ + +A + FNQ     P  F            +  +  GK   A    
Sbjct: 294 YYGLGLALLNQRQWREAIDVFNQAISINPDCFWSYNH-----LGYCLFKQGKISPAIDAY 348

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
           ++ I        +  VY  +G        D    Q      +      ++        + 
Sbjct: 349 KQAIAI---DPEIPEVYIRLG--------DALLQQPDIDGAIAAYLDAIKAQPE---AEI 394

Query: 178 ARFYVTVGR 186
           A   +   R
Sbjct: 395 AYLKLRHLR 403


>gi|237752475|ref|ZP_04582955.1| flagellar functional protein [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229375964|gb|EEO26055.1| flagellar functional protein [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 781

 Score = 35.5 bits (81), Expect = 9.1,   Method: Composition-based stats.
 Identities = 13/109 (11%), Positives = 32/109 (29%), Gaps = 17/109 (15%)

Query: 157 LMLQYMSRIVERYTNSPYVKGA-RFYVTVGRNQ--LAAKEVEIGRYYLKRGEYVAAIPRF 213
             L  +  ++  Y N+ + +      +        L   E  I         ++ A    
Sbjct: 186 EALNAIDEMLALYPNTIFKRDVLYLRLVALDGMQNLENYEEIIAL----SKAWLGA---- 237

Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
                 Y    H  + +  + + Y  +   +EA+   + +   Y    +
Sbjct: 238 ------YPTDIHVPQVLFIVAKTYARMKFFEEAKYYYNRLFNEYKGDKY 280


>gi|254457008|ref|ZP_05070436.1| hypothetical protein CBGD1_703 [Campylobacterales bacterium GD 1]
 gi|207085800|gb|EDZ63084.1| hypothetical protein CBGD1_703 [Campylobacterales bacterium GD 1]
          Length = 348

 Score = 35.5 bits (81), Expect = 9.1,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 47/113 (41%), Gaps = 14/113 (12%)

Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE-VEIGRYYLKRGEYVAAIPRF 213
           TK   +++ R + ++ + P    +   V + + +L+ K  + +   Y K G++  +I  +
Sbjct: 37  TKEDHRHLDRFLRQFRSLP--SKSELKVLITKGELSEKSWLLLAHSYFKNGDFEKSIEIY 94

Query: 214 QLVL-----ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
             +L      NY D       +  L   Y     ++ A+E+   I +  P+  
Sbjct: 95  NELLKVGSKENYRDT------LFLLGRTYFKAGFLERAKEIFLKILQNNPRTP 141


>gi|166240380|ref|XP_001733010.1| SET domain-containing protein [Dictyostelium discoideum AX4]
 gi|165988569|gb|EDR41059.1| SET domain-containing protein [Dictyostelium discoideum AX4]
          Length = 513

 Score = 35.5 bits (81), Expect = 9.1,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 32/91 (35%), Gaps = 8/91 (8%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           E    F KE+  + A E +N+     P  +     +SL       +   +Y+ +    +E
Sbjct: 10  EIGNKFFKEKRLNLAIENYNKAIEFDPSDYQSYTNRSL-----AYFQKKEYENSLEDSKE 64

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
            I   P+     Y  Y + +     + +   
Sbjct: 65  AIKINPQWDKAHY-RYSMALKQFNRLDESLR 94


>gi|149022321|gb|EDL79215.1| rCG27001 [Rattus norvegicus]
          Length = 612

 Score = 35.5 bits (81), Expect = 9.1,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 28/60 (46%), Gaps = 3/60 (5%)

Query: 66  LFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
             +++  +S+A +  +   +  P +  A  SLL  A+  Y   +++ AA   E+    +P
Sbjct: 20  RLIRDSRYSEAVQLLSAELQRSPRSR-AGLSLL--AYCYYRLQEFELAAECYEQLSQMHP 76


>gi|22298510|ref|NP_681757.1| hypothetical protein tlr0967 [Thermosynechococcus elongatus BP-1]
 gi|22294690|dbj|BAC08519.1| tlr0967 [Thermosynechococcus elongatus BP-1]
          Length = 239

 Score = 35.5 bits (81), Expect = 9.1,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 27/101 (26%), Gaps = 35/101 (34%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
           G    A     + I   P   + DY Y+  G++Y         DQ   +  +   +  + 
Sbjct: 103 GDLAAAIDAFSQAIKLNP---SADY-YFARGLAYY--------DQGDMQRAIADFTTALG 150

Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
                                       I  YY +   Y+A
Sbjct: 151 DDPQ-----------------------FIAAYYNRGMAYLA 168


>gi|327440766|dbj|BAK17131.1| FOG: TPR repeat [Solibacillus silvestris StLB046]
          Length = 414

 Score = 35.5 bits (81), Expect = 9.2,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 43/118 (36%), Gaps = 8/118 (6%)

Query: 5   LGRAICIFEAWAYQLYKFALTIFFS-IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63
              A+ I+E       KFA  I    +A  +  G   +++ D Y++++ +      ++  
Sbjct: 147 FTEAVRIYEELYAIDKKFAGIILAQRLAEVYRAGAGYETALDYYMEALEEEVTADLLFGS 206

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           A    + + +  A +         P  FA       L+ A         ++A  + +E
Sbjct: 207 AYAAFQTEKYELAIKQLEDLKELDPDYFAAY-----LLLAESYAMLEDNERALKVIKE 259


>gi|317406447|gb|EFV86658.1| hypothetical protein HMPREF0005_04913 [Achromobacter xylosoxidans
           C54]
          Length = 170

 Score = 35.5 bits (81), Expect = 9.2,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 33/86 (38%), Gaps = 10/86 (11%)

Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV-----LANYSDAEHAEE 228
           Y       + V ++    KEV     Y       AAI R+  V     +  + D+  A++
Sbjct: 89  YSLKKLERLGVVQSAKTGKEVI----YTTTDAGAAAIQRYAEVREQCLVKPFIDSPAADD 144

Query: 229 AMARLVEAYVAL-ALMDEAREVVSLI 253
           A  +L     AL  L D+A    + +
Sbjct: 145 ASHQLANTLRALSGLYDQAARAATSL 170


>gi|300864445|ref|ZP_07109316.1| tetratricopeptide TPR_2 [Oscillatoria sp. PCC 6506]
 gi|300337589|emb|CBN54464.1| tetratricopeptide TPR_2 [Oscillatoria sp. PCC 6506]
          Length = 1129

 Score = 35.5 bits (81), Expect = 9.2,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 63/228 (27%), Gaps = 54/228 (23%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
                 +     A   + Q     P    A         + +  G  ++A    ++ I  
Sbjct: 358 GNALQGQGKMDAAIRAYEQALEFEP--NYAE-VRANIGSMYFKMGHLEKAIVYYQQAIAL 414

Query: 124 YPESKNVDYVY------YLV------GMSYAQMIRDVP----------------YDQRAT 155
            P   ++  VY      +         ++Y Q   D+                   +   
Sbjct: 415 KP---DLAGVYWNLGKVFQKQGKSAEAIAYFQKTSDINPHVVGADFHFNLANTLLTEGKR 471

Query: 156 KLMLQYMSRIVERYTN--SPYVKGARFYV---------------TVGRNQLAAKEVEIGR 198
              +Q   R +    +    Y       +                  + QL A    I  
Sbjct: 472 DEAIQSYQRAIAVKPDWAEAYANIGSARMQQGNLEEAIQYYRKAIAIKPQLEALHFNIAN 531

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
             L +G+Y  AI  +Q  + +  D     +A+A +  A+     ++EA
Sbjct: 532 ALLHQGKYEEAISNYQEAIKHKPD---WPDAIANMGNAFSMQGKLEEA 576


>gi|294643872|ref|ZP_06721664.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a]
 gi|292640814|gb|EFF59040.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a]
          Length = 716

 Score = 35.5 bits (81), Expect = 9.2,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 58/174 (33%), Gaps = 32/174 (18%)

Query: 71  QNFSKAYEYFNQCSRDFPFAGVARK---SLLMSAFVQYSAGKYQQAASLGEEYITQY--- 124
           + + KA E   +  +  P    + K    L     + Y   +Y +AA+  ++    Y   
Sbjct: 30  KEYGKALEILTKAEKLLPTGDKSDKMGEILRSRGSILYRQKQYAEAAANYQQAADIYKIL 89

Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
           P S     V Y   +S       +  ++ A +   Q   R                 + V
Sbjct: 90  PGSD----VKYQDALSSLNRCHTMMGNETAARQTEQDAER---------------QRMAV 130

Query: 185 GRNQLAAKEVEIGRYYLKRGE----YVAAIPRFQLVLANYSDAEHAEEAMARLV 234
               L     ++  Y L+ GE    YV+A+     +   Y      ++A+A + 
Sbjct: 131 LNRLLKENLEQLDAYRLQWGEDGLMYVSALG---TIADIYYTQGQTDKALAYME 181


>gi|288926837|ref|ZP_06420745.1| LMP1 [Prevotella buccae D17]
 gi|288336409|gb|EFC74787.1| LMP1 [Prevotella buccae D17]
          Length = 475

 Score = 35.5 bits (81), Expect = 9.2,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 45/117 (38%), Gaps = 7/117 (5%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPF 89
           A   L     + S+ +Y + + +  Y    + + A     E +++ A E         P 
Sbjct: 177 ARIALSKGNTEYSKRIYNELLDENPYSTHYWNQLATSQFLENDYAHAIESSEFSIAIDPT 236

Query: 90  AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
                 +LL  A   ++ G +++A    + Y    P+ + + Y+  L G++     R
Sbjct: 237 DP---DALLNKANALFALGNWEEALEYFDRYARLEPDDE-LGYM--LKGITLLTQGR 287


>gi|167946185|ref|ZP_02533259.1| hypothetical protein Epers_06417 [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 159

 Score = 35.5 bits (81), Expect = 9.2,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 31/82 (37%), Gaps = 11/82 (13%)

Query: 89  FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
               A  +LL   ++ Y    +  A    E+ +   P S +       +G++   ++   
Sbjct: 5   GGDTAEFALLRYGWLNYLVRNHNDAIRSYEKALRLNPNSIDA-----RLGLTLPLLV--- 56

Query: 149 PYDQRATKLMLQYMSRIVERYT 170
              Q+  K   +Y  ++++R  
Sbjct: 57  ---QQRWKEAARYAKQVLQRSP 75


>gi|149377996|ref|ZP_01895721.1| TPR repeat protein [Marinobacter algicola DG893]
 gi|149357705|gb|EDM46202.1| TPR repeat protein [Marinobacter algicola DG893]
          Length = 582

 Score = 35.5 bits (81), Expect = 9.2,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 61/194 (31%), Gaps = 39/194 (20%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSR-DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y    +  +E    +A  Y+    + ++ F  +AR S LM+       G+  +A +   E
Sbjct: 333 YYLGRIADEENENEQAIGYYRNVEKGNYFFPALARASELMA-----EQGELDEALADIRE 387

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIR-DVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
                P+                +++  ++  D+   +  LQ  +  ++ +         
Sbjct: 388 IRKNNPDQDE-----------NFRLLEINLLLDRDHDERALQAANEALKSFPG------- 429

Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM-ARLVEAY 237
              +   R  L               +   A    + ++    D   A  A+   L    
Sbjct: 430 NVRIRYARAMLLDS----------MDKPEQAEADLRTIIEEQPDNAVALNALGYILTTRT 479

Query: 238 VALALMDEAREVVS 251
             L   DEAR+ + 
Sbjct: 480 DRL---DEARDYIE 490


>gi|305666703|ref|YP_003862990.1| sensor histidine kinase/response regulator [Maribacter sp.
           HTCC2170]
 gi|88708927|gb|EAR01161.1| sensor histidine kinase/response regulator [Maribacter sp.
           HTCC2170]
          Length = 671

 Score = 35.5 bits (81), Expect = 9.2,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 55/137 (40%), Gaps = 17/137 (12%)

Query: 22  FALTIFFSIAVC---------FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN 72
             LTI  SIA            L G+         +D++T +    E    A L+  +++
Sbjct: 115 LTLTILNSIAGAYDFKGDYAEALSGYLECIEIATQIDNLTMLSIVNE--NIANLYAAQKD 172

Query: 73  FSKAYEYF---NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
           F++A E+F    + ++       A +++   A V    G  + A       IT + + K 
Sbjct: 173 FNQAIEFFKTVKKINKKIGNEIYAAETMSNMASVYADMGNLEYAMFNINSSITTFEKHKK 232

Query: 130 VD---YVYYLVGMSYAQ 143
           +D   Y Y + G +Y +
Sbjct: 233 MDWLAYAYEIKGKTYLK 249


>gi|312378704|gb|EFR25204.1| hypothetical protein AND_09670 [Anopheles darlingi]
          Length = 401

 Score = 35.5 bits (81), Expect = 9.3,   Method: Composition-based stats.
 Identities = 10/81 (12%), Positives = 26/81 (32%), Gaps = 7/81 (8%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYS 106
            +  +     ++  +A     EQ + +A + F +  +  P +    A++           
Sbjct: 86  PTEEEFDQANDLRSQAAAAYGEQKYDEAVKLFTEAIQLNPKSALYYAKRGQ-----AYLK 140

Query: 107 AGKYQQAASLGEEYITQYPES 127
             K        +  +   P+S
Sbjct: 141 LQKPNACIRDCDRALEINPDS 161


>gi|289579183|ref|YP_003477810.1| ATPase AAA [Thermoanaerobacter italicus Ab9]
 gi|289528896|gb|ADD03248.1| ATPase AAA-2 domain protein [Thermoanaerobacter italicus Ab9]
          Length = 816

 Score = 35.5 bits (81), Expect = 9.3,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 13/85 (15%)

Query: 184 VGRNQLAAKEVEIG--------RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL-- 233
           + +  LA  E+++         R Y++R    A   RFQ ++ +    E   E +  L  
Sbjct: 301 ILKPALARGEIQVVGATTLEEYRKYVERD--PALERRFQPIIVDEPTVEETIEILKGLRD 358

Query: 234 -VEAYVALALMDEAREVVSLIQERY 257
             EA+  + + DEA E  + +  RY
Sbjct: 359 KYEAHHRVKITDEALEAAARLSHRY 383


>gi|260823262|ref|XP_002604102.1| hypothetical protein BRAFLDRAFT_71609 [Branchiostoma floridae]
 gi|229289427|gb|EEN60113.1| hypothetical protein BRAFLDRAFT_71609 [Branchiostoma floridae]
          Length = 1535

 Score = 35.5 bits (81), Expect = 9.3,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 36/130 (27%), Gaps = 30/130 (23%)

Query: 52   TDVRYQREVYEKAVLFLKEQNFSKAYEYFN-QCS-RDFPFAG---VARKSLL--MSAFVQ 104
            TD  +   +    + +    +  KA  YF      ++  +         + L        
Sbjct: 899  TDTHFAELLGNLGIAWGNLGDHKKAISYFEQALQIKNHIYGQSTAYPIVAALLAELGSAW 958

Query: 105  YSAGKYQQAASLGEEYITQYPE-----------SKNVDYVY------------YLVGMSY 141
            Y  G Y++A S  EE +  Y               ++ +              Y   M Y
Sbjct: 959  YKLGDYRKAISYHEEALQIYRTTKRIYGYETTAHFHIAHALNSLGIQWHCWGDYKKAMCY 1018

Query: 142  AQMIRDVPYD 151
             +    +  D
Sbjct: 1019 YEQALQMRKD 1028


>gi|196014348|ref|XP_002117033.1| hypothetical protein TRIADDRAFT_61052 [Trichoplax adhaerens]
 gi|190580255|gb|EDV20339.1| hypothetical protein TRIADDRAFT_61052 [Trichoplax adhaerens]
          Length = 971

 Score = 35.5 bits (81), Expect = 9.3,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 41/120 (34%), Gaps = 20/120 (16%)

Query: 43  SRDVYLDSVTDVRYQREVY----EKAVLFLKEQNFSKAYEYFNQ--CSRDFPFAGVARKS 96
           + +      +D  Y  E Y    EK   ++K+ N+ +A + + Q    R    A    ++
Sbjct: 602 TNNEIPSPKSDSNYTEEYYIQMKEKGNSYVKKGNYEEAIKSYTQCILVRPNEVAPYTNRA 661

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS------YAQMIRDVPY 150
           L           +   A +  E  +   P +       +   +S      Y + IRD+  
Sbjct: 662 L-----CYLKTSQAALAEADTETALKVDPSNVK---ALFRRALSRIALENYKEGIRDLNL 713


>gi|158339401|ref|YP_001520578.1| TPR domain-containing protein [Acaryochloris marina MBIC11017]
 gi|158309642|gb|ABW31259.1| TPR domain protein [Acaryochloris marina MBIC11017]
          Length = 1350

 Score = 35.5 bits (81), Expect = 9.3,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 59/185 (31%), Gaps = 37/185 (20%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
             L+L E+ F +A   F +     P      + +       V +   +Y+ A +   + I
Sbjct: 752 GQLYLAERRFEQALAQFKKGISIDPENTTHYSGQ-----GHVYFGLKRYEDAIAAHTQAI 806

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP-YVK---G 177
              P              S+     ++   ++  +  +   S+ +E    +P Y +    
Sbjct: 807 QLEPNLP-----------SHLSSRANIYLLRQQYENAIADWSKAIELDPQNPTYFQGRGE 855

Query: 178 ARFYVTVGRNQLAAKEVEI-------------GRYYLKRGEYVAAIPRFQLVLAN--YSD 222
           A   +   +  +A     I             G+ Y    +Y AAI  F   + N  Y  
Sbjct: 856 AYAGLNQPKAAIADFSQAIQLAPRDVQSYTGRGQAYQSLQQYEAAIANFNQAIKNADYPQ 915

Query: 223 AEHAE 227
           A   +
Sbjct: 916 ATAVD 920


>gi|332712382|ref|ZP_08432309.1| ABC-type branched-chain amino acid transport system, periplasmic
           component [Lyngbya majuscula 3L]
 gi|332348856|gb|EGJ28469.1| ABC-type branched-chain amino acid transport system, periplasmic
           component [Lyngbya majuscula 3L]
          Length = 1051

 Score = 35.1 bits (80), Expect = 9.4,   Method: Composition-based stats.
 Identities = 20/148 (13%), Positives = 54/148 (36%), Gaps = 20/148 (13%)

Query: 44  RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSA 101
           +++      D      +Y++A    ++   +KA   + Q     P  F+     ++   A
Sbjct: 417 QEILELEKIDQDQTNPIYQQATTQDQQGEITKALGLYEQVLELNPNHFS-----AVFSLA 471

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM--SYAQMIRDVPYDQRATKLML 159
                 G++++A +  +     Y     +D +    G+  S       +   Q  T+   
Sbjct: 472 QGYLELGEFEKAVTYYQR---AY----KIDQIRNKDGLVRSLLNYGNQLIEQQSFTR-AR 523

Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRN 187
           +  ++++E   ++     A+  +   +N
Sbjct: 524 EQFNQVLEIAPDNI---SAQEKILEIQN 548


>gi|157829381|gb|ABV82640.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked
           transcript variant 123 [Homo sapiens]
          Length = 652

 Score = 35.1 bits (80), Expect = 9.4,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%)

Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
             Y +A S  + Y +        DY       Y +G+ Y            A    ++  
Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150

Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198
             ++    +    K     + +        ++ L                 A  +  I  
Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210

Query: 199 YYLKRGEYVAAIPRFQLVLAN 219
            Y  + +Y +A   ++ +L  
Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231


>gi|310821635|ref|YP_003953993.1| n-acetylmuramoyl-l-alanine amidase domain-containing protein
           [Stigmatella aurantiaca DW4/3-1]
 gi|309394707|gb|ADO72166.1| N-acetylmuramoyl-L-alanine amidase domain protein [Stigmatella
           aurantiaca DW4/3-1]
          Length = 535

 Score = 35.1 bits (80), Expect = 9.4,   Method: Composition-based stats.
 Identities = 13/107 (12%), Positives = 34/107 (31%), Gaps = 12/107 (11%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL-------MSAFVQYSAGKYQQAA 114
           + A   L   ++      F   + + P +  A  +L          + + +     Q A 
Sbjct: 41  DAARRKL-RHHWLSVAHRFEAVASEHPKSTRAPDALFTAGELMNELSRISFLPEDQQAAI 99

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
           +   + +  +P  +  D   +L+   Y +          + + +L  
Sbjct: 100 TDYTKLMEAHPRHRLADDAAFLLARIYLERQDQ----PESARRVLSA 142


>gi|307111160|gb|EFN59395.1| hypothetical protein CHLNCDRAFT_137885 [Chlorella variabilis]
          Length = 268

 Score = 35.1 bits (80), Expect = 9.4,   Method: Composition-based stats.
 Identities = 14/140 (10%), Positives = 47/140 (33%), Gaps = 17/140 (12%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGK 109
           T+     + +E  V+ L+++ +++A +   +  +++        + +     F  ++  K
Sbjct: 140 TNDATSEDYFELGVILLRKKLYTQATKNLEKAQKNWQGEPE-ELAQVHNALGFAFFNMDK 198

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
              A     + +   P      YV      ++  +       ++     L     ++   
Sbjct: 199 VDAAIDQYRKAVDLQPG-----YV-----TAWNNLGDAYER-KKDYSPALAAYREVLTYA 247

Query: 170 TNSPYVKGARFYVTVGRNQL 189
            ++     A+      R ++
Sbjct: 248 PDNK---VAQARSEYCRTRI 264


>gi|225629417|ref|ZP_03787450.1| TPR domain-containing protein [Brucella ceti str. Cudo]
 gi|225615913|gb|EEH12962.1| TPR domain-containing protein [Brucella ceti str. Cudo]
          Length = 315

 Score = 35.1 bits (80), Expect = 9.4,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 31/106 (29%), Gaps = 18/106 (16%)

Query: 63  KAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           +   + K   + +A   F+Q     P  +   A ++L+      Y  G   +A       
Sbjct: 106 RGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR----YM-GDNNKAVQDYSRA 160

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
           I   P+    D  Y   G  Y                 L   ++ +
Sbjct: 161 IQLNPQ---YDAAYIGRGNVY--------RQAGHLDQALNDFNQAI 195


>gi|225460696|ref|XP_002270347.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 341

 Score = 35.1 bits (80), Expect = 9.4,   Method: Composition-based stats.
 Identities = 17/150 (11%), Positives = 47/150 (31%), Gaps = 19/150 (12%)

Query: 42  SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE-YFNQCSRDFPFAGVARKSLL-- 98
           S++++     +      E++E   + L+ + +  A +       +          + +  
Sbjct: 193 SAKELQEQVRSGDASATELFELGAVMLRRKFYPAATKFLLQAIEKWD--GDDQDLAQVYN 250

Query: 99  MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
                    GK ++  +  E  +   P      YV      +    + D    ++  K  
Sbjct: 251 ALGVSYVRDGKLEKGITQFENAVKLQPG-----YV------TAWNNLGDAYEKKKDLKSA 299

Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           L+    ++    N+     AR      +++
Sbjct: 300 LKAFEEVLLFDPNNK---VARPRRDALKDR 326


>gi|218710034|ref|YP_002417655.1| tetratricopeptide repeat protein [Vibrio splendidus LGP32]
 gi|218323053|emb|CAV19230.1| Predicted N-acetylglucosaminyl transferase [Vibrio splendidus
           LGP32]
          Length = 392

 Score = 35.1 bits (80), Expect = 9.4,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 2/52 (3%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
           + +G++YL   +Y   I   + VL    D +   E +  L E Y  L    +
Sbjct: 221 IALGKFYLANEDYHKTITYLESVLE--QDIDFISEVLPTLAECYHKLGQEAQ 270


>gi|260820246|ref|XP_002605446.1| hypothetical protein BRAFLDRAFT_74261 [Branchiostoma floridae]
 gi|229290779|gb|EEN61456.1| hypothetical protein BRAFLDRAFT_74261 [Branchiostoma floridae]
          Length = 1299

 Score = 35.1 bits (80), Expect = 9.4,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 71/221 (32%), Gaps = 42/221 (19%)

Query: 50   SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVAR-----KSLLMSAF 102
            S  +      +      +    ++ KA  Y  Q  + +   +           SL     
Sbjct: 1021 STPNPDIATSLSNLGQDWHNLGDYRKAISYHEQALQMYRSIYGPHTPHPDIATSLNNLGL 1080

Query: 103  VQYSAGKYQQAASLGEEYITQYPE-------SKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
              ++ G Y++A S  E+ +  Y           ++      +G+S+  +           
Sbjct: 1081 SWHNLGDYRKAISYHEQALQMYRNIYGQSTAHPDIATSLNNLGLSWHTL--------GDY 1132

Query: 156  KLMLQYMSRIVERYTNSPYVKG-ARFYVT--VGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
            +  + Y  + ++ Y N  Y +  A   +   +G   LA   +         G+Y  AI  
Sbjct: 1133 RKAISYHEQALQMYRN-IYGQSTAHSGIATSLGNLGLAWHNL---------GDYRKAISY 1182

Query: 213  FQLVLANY-----SDAEHAEEA--MARLVEAYVALALMDEA 246
             + VL  Y         H + A  +  L  ++  L    +A
Sbjct: 1183 HEQVLQMYRSIYGPHTPHPDIATSLNNLGLSWHTLGDYRKA 1223


>gi|39935988|ref|NP_948264.1| hypothetical protein RPA2923 [Rhodopseudomonas palustris CGA009]
 gi|39649842|emb|CAE28364.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
          Length = 829

 Score = 35.1 bits (80), Expect = 9.4,   Method: Composition-based stats.
 Identities = 11/78 (14%), Positives = 22/78 (28%), Gaps = 4/78 (5%)

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
                 E+++  YP       V     +  A     + + +             + RY  
Sbjct: 291 DTLQAYEDFLAAYPNDPLAKRV---RAIV-AARREAITWRRTYRVDTPDAYWSYLRRYPR 346

Query: 172 SPYVKGARFYVTVGRNQL 189
            P+   AR  + +    L
Sbjct: 347 GPHAADARRRLEILAAAL 364


>gi|86148761|ref|ZP_01067033.1| putative heat shock protein [Vibrio sp. MED222]
 gi|85833458|gb|EAQ51644.1| putative heat shock protein [Vibrio sp. MED222]
          Length = 391

 Score = 35.1 bits (80), Expect = 9.4,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 2/52 (3%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
           + +G++YL   +Y   I   + VL    D +   E +  L E Y  L    +
Sbjct: 220 IALGKFYLANEDYHKTITYLESVLE--QDIDFISEVLPTLAECYHKLGQEAQ 269


>gi|319951894|ref|YP_004163161.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
 gi|319420554|gb|ADV47663.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
          Length = 647

 Score = 35.1 bits (80), Expect = 9.5,   Method: Composition-based stats.
 Identities = 7/58 (12%), Positives = 22/58 (37%), Gaps = 3/58 (5%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           EKA       +++ A   +    ++      + +         Y   +Y++A++  ++
Sbjct: 27  EKAQSKFNSFDYADAISTYEDLIKE---GYSSEEVYKNLGDANYMNAQYKEASTWYQK 81


>gi|302765737|ref|XP_002966289.1| hypothetical protein SELMODRAFT_439621 [Selaginella moellendorffii]
 gi|300165709|gb|EFJ32316.1| hypothetical protein SELMODRAFT_439621 [Selaginella moellendorffii]
          Length = 326

 Score = 35.1 bits (80), Expect = 9.5,   Method: Composition-based stats.
 Identities = 8/79 (10%), Positives = 28/79 (35%), Gaps = 1/79 (1%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSA 107
           +     +    +++       + ++ KA E+      + P  + +  +  +  A    + 
Sbjct: 146 EQAQQRKQAAVMFDLGQRAYGKGSYGKAVEFLEAALTNVPKASNLGGEIQIWLAMAYEAH 205

Query: 108 GKYQQAASLGEEYITQYPE 126
            ++    SL +   + +P 
Sbjct: 206 NRHDDCISLYKRLESSHPN 224


>gi|302793031|ref|XP_002978281.1| hypothetical protein SELMODRAFT_443791 [Selaginella moellendorffii]
 gi|300154302|gb|EFJ20938.1| hypothetical protein SELMODRAFT_443791 [Selaginella moellendorffii]
          Length = 330

 Score = 35.1 bits (80), Expect = 9.5,   Method: Composition-based stats.
 Identities = 8/79 (10%), Positives = 28/79 (35%), Gaps = 1/79 (1%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSA 107
           +     +    +++       + ++ KA E+      + P  + +  +  +  A    + 
Sbjct: 150 EQAQQRKQAAVMFDLGQRAYGKGSYGKAVEFLEAALTNVPKASNLGGEIQIWLAMAYEAH 209

Query: 108 GKYQQAASLGEEYITQYPE 126
            ++    SL +   + +P 
Sbjct: 210 NRHDDCISLYKRLESSHPN 228


>gi|297545353|ref|YP_003677655.1| ATPase [Thermoanaerobacter mathranii subsp. mathranii str. A3]
 gi|296843128|gb|ADH61644.1| ATPase AAA-2 domain protein [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 816

 Score = 35.1 bits (80), Expect = 9.5,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 13/85 (15%)

Query: 184 VGRNQLAAKEVEIG--------RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL-- 233
           + +  LA  E+++         R Y++R    A   RFQ ++ +    E   E +  L  
Sbjct: 301 ILKPALARGEIQVVGATTLEEYRKYVERD--PALERRFQPIIVDEPTVEETIEILKGLRD 358

Query: 234 -VEAYVALALMDEAREVVSLIQERY 257
             EA+  + + DEA E  + +  RY
Sbjct: 359 KYEAHHRVKITDEALEAAARLSHRY 383


>gi|224492384|emb|CAX51622.1| C. elegans protein B0464.2c, partially confirmed by transcript
           evidence [Caenorhabditis elegans]
          Length = 1201

 Score = 35.1 bits (80), Expect = 9.5,   Method: Composition-based stats.
 Identities = 19/143 (13%), Positives = 50/143 (34%), Gaps = 24/143 (16%)

Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKL----MLQYMSRIVERYTNSPYVK---------- 176
            Y    +G  + + + +    +   K      LQ   + ++    + Y            
Sbjct: 683 PYSLVALGNVWFEQLLNPSRKKEDEKKYIDRALQMYQKALKLQPKNMYAANGIGCVLAYK 742

Query: 177 ----GARFYVTVGRNQLAAKE---VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
                AR   +  R   +      + I    ++R +++AA+  +   +  +   +  +  
Sbjct: 743 RNWNDARDVFSQVRESTSEFYDVWLNIAHVCMEREQWMAAVQMYSSAMKKFR--KENDST 800

Query: 230 M-ARLVEAYVALALMDEAREVVS 251
           +   L +AY    +++EA+E + 
Sbjct: 801 LQHYLAKAYYRANMLNEAKEALE 823


>gi|223039415|ref|ZP_03609703.1| tetratricopeptide repeat domain protein [Campylobacter rectus
           RM3267]
 gi|222879211|gb|EEF14304.1| tetratricopeptide repeat domain protein [Campylobacter rectus
           RM3267]
          Length = 790

 Score = 35.1 bits (80), Expect = 9.5,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 29/68 (42%)

Query: 51  VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
           V+D  Y   +Y     +LK++  S A    +    + P +   + ++L  A   Y  G+ 
Sbjct: 250 VSDENYPEVLYLVTKAYLKQELVSDANYTLDILINEHPNSNFTKLAILEFADRLYVTGRQ 309

Query: 111 QQAASLGE 118
            +A  + E
Sbjct: 310 DEAVRMYE 317


>gi|149923535|ref|ZP_01911936.1| tol-pal system protein YbgF [Plesiocystis pacifica SIR-1]
 gi|149815604|gb|EDM75135.1| tol-pal system protein YbgF [Plesiocystis pacifica SIR-1]
          Length = 288

 Score = 35.1 bits (80), Expect = 9.5,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 43/131 (32%), Gaps = 12/131 (9%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
            ++   A   LK ++F +A   F      +P      +         YS   Y+ A    
Sbjct: 145 SDLMRAAESALKSKDFGRARRLFRTYLSRYPADKKEAEVRFKIGQTLYSERDYRSALGEF 204

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY---TNSPY 174
              +   PES+ +    Y  G+++A +              + Y   IV+      +  Y
Sbjct: 205 YWLVQNAPESEVIHDAVYYSGLAFANL--------GQCDKSMAYFEAIVKEDSGAPD-RY 255

Query: 175 VKGARFYVTVG 185
            K A   ++  
Sbjct: 256 KKQAAKQISTL 266


>gi|284039688|ref|YP_003389618.1| excinuclease ABC C subunit domain protein [Spirosoma linguale DSM
           74]
 gi|283818981|gb|ADB40819.1| Excinuclease ABC C subunit domain protein [Spirosoma linguale DSM
           74]
          Length = 511

 Score = 35.1 bits (80), Expect = 9.5,   Method: Composition-based stats.
 Identities = 11/95 (11%), Positives = 33/95 (34%), Gaps = 21/95 (22%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
            ++  D+    + +  Y   +Y + + +    N++ A +     ++        ++  + 
Sbjct: 55  TKAIDDLSASLLLNETYGMGLYNRGIAYYFSSNYTAAIDDLQAANQ--------QQIQVN 106

Query: 100 SAF----VQYSAGKYQQAA---------SLGEEYI 121
             +      Y   +Y+ A          +  +EYI
Sbjct: 107 VDYFVGLCYYYTEQYESAIHLFSSVLDSAQADEYI 141


>gi|196232945|ref|ZP_03131794.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
 gi|196222923|gb|EDY17444.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
          Length = 808

 Score = 35.1 bits (80), Expect = 9.5,   Method: Composition-based stats.
 Identities = 12/111 (10%), Positives = 31/111 (27%), Gaps = 14/111 (12%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y       + + + +A   + Q     P       +          AG++++A +  +  
Sbjct: 152 YNLGNALRERKRYGEAIAAYRQAIALGP--DY-VDAHNNLGVACKEAGRFEEAVAAYQRA 208

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           I   P+                  +     ++ A    +    R +E   +
Sbjct: 209 IELQPDHAAA-----------HNNLGAAWRERGALDEAIVAQRRAIELRPD 248


>gi|149185187|ref|ZP_01863504.1| putative Zn-dependent protease [Erythrobacter sp. SD-21]
 gi|148831298|gb|EDL49732.1| putative Zn-dependent protease [Erythrobacter sp. SD-21]
          Length = 460

 Score = 35.1 bits (80), Expect = 9.5,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 21/58 (36%), Gaps = 3/58 (5%)

Query: 81  NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
               RD+P    +  +LL  A+  +   +  +A    +  I + P      Y   L G
Sbjct: 258 EATLRDYPETDTSTPALLARAYAYHKQARIDRALEAADTLIAREPTDP---YFLELKG 312


>gi|219850494|ref|YP_002464927.1| tetratricopeptide repeat-containing protein [Chloroflexus aggregans
           DSM 9485]
 gi|219544753|gb|ACL26491.1| Tetratricopeptide TPR_2 repeat protein [Chloroflexus aggregans DSM
           9485]
          Length = 414

 Score = 35.1 bits (80), Expect = 9.5,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 44/102 (43%), Gaps = 11/102 (10%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           +    + ++ + + +A   F +C    P    A  + L  A++  + G+Y +A ++ E+ 
Sbjct: 81  FNLGFVLIELERYDEAEREFQRCLELDP-NDTA--AQLELAYIYAARGEYAKAVTMLEK- 136

Query: 121 ITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
               P  +  D   V++L+G      ++     Q+A +  L 
Sbjct: 137 ----PRQRYYDDWAVFHLLGRCLF-QLQQFDEAQQAWQHALA 173


>gi|109097936|ref|XP_001086436.1| PREDICTED: transmembrane and TPR repeat-containing protein 2-like
           [Macaca mulatta]
          Length = 732

 Score = 35.1 bits (80), Expect = 9.5,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 28/55 (50%), Gaps = 2/55 (3%)

Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA-RLVEAYVALALMDEAR 247
             +G+ Y ++G Y  A+  ++  +      + A +++   + EAY+ L+ + EA 
Sbjct: 610 YNLGKLYHEQGHYEEALSVYKEAIQKMPR-QFAPQSLYNMMGEAYMRLSKLPEAE 663


>gi|85858705|ref|YP_460907.1| TPR repeat-containing protein [Syntrophus aciditrophicus SB]
 gi|85721796|gb|ABC76739.1| tetratricopeptide repeat family protein [Syntrophus aciditrophicus
           SB]
          Length = 322

 Score = 35.1 bits (80), Expect = 9.5,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 21/56 (37%), Gaps = 3/56 (5%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           A   L    +S+A   + +    +P        LL  A+  +  G+  +A    E+
Sbjct: 16  AENLLNSGRYSEAAAVYGRLVEQYP---EEESFLLAQAWAYHDNGQRDEAIVCFEK 68


>gi|326475991|gb|EGE00001.1| transcriptional corepressor Cyc8 [Trichophyton tonsurans CBS
           112818]
          Length = 1165

 Score = 35.1 bits (80), Expect = 9.6,   Method: Composition-based stats.
 Identities = 20/143 (13%), Positives = 42/143 (29%), Gaps = 22/143 (15%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108
            D    +  Y     ++ +  + KAYE + Q        P              + Y   
Sbjct: 357 ADNSDAQSWYLLGRCYMSQAKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIN 410

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           +Y+ A       I   P    +  V+Y +G +  +   +   D       L    R  + 
Sbjct: 411 QYRDALDAYSRAIRLNP---YISEVWYDLG-TLYESCNNQTSD------ALDAYGRAADL 460

Query: 169 YTNSPYVKGARFYVTVGRNQLAA 191
              +      +  + + ++  A 
Sbjct: 461 DPTN---VQIKARLQLLQSGQAG 480


>gi|288819094|ref|YP_003433442.1| hypothetical protein HTH_1797 [Hydrogenobacter thermophilus TK-6]
 gi|288788494|dbj|BAI70241.1| hypothetical protein HTH_1797 [Hydrogenobacter thermophilus TK-6]
 gi|308752677|gb|ADO46160.1| conserved hypothetical protein [Hydrogenobacter thermophilus TK-6]
          Length = 226

 Score = 35.1 bits (80), Expect = 9.6,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 50/146 (34%), Gaps = 39/146 (26%)

Query: 107 AGKYQQAASLGE------------EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
             +Y +A +L              E+I + P++   D  Y+ +G ++         D   
Sbjct: 103 QREYDEAINLYNQKQLNKAKEKFIEFIRKNPQTPLTDNAYFWLGTTF--------RDLNE 154

Query: 155 TKLMLQYMSRIVER-----YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
                     +VER       +      A               +++ R Y  +G+   A
Sbjct: 155 LDKAEAVWLTLVERCKRGELPDCNKAPAAY--------------LQLARLYELKGDQQKA 200

Query: 210 IPRFQLVLANYSDAEHAEEAMARLVE 235
              +Q ++ +Y  +E A+ A  +L +
Sbjct: 201 NEFYQNLMKDYPLSEEAQIAKRKLGK 226


>gi|242041483|ref|XP_002468136.1| hypothetical protein SORBIDRAFT_01g040210 [Sorghum bicolor]
 gi|241921990|gb|EER95134.1| hypothetical protein SORBIDRAFT_01g040210 [Sorghum bicolor]
          Length = 843

 Score = 35.1 bits (80), Expect = 9.6,   Method: Composition-based stats.
 Identities = 13/89 (14%), Positives = 31/89 (34%), Gaps = 3/89 (3%)

Query: 31  AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
           +    VG + ++ ++          +   +Y    L +    F +A E + +     P  
Sbjct: 421 SALHAVGEDDRAIQEFQTAIDLKPGHVDALYNLGGLNMDAGRFVRAAEMYTRVLSIRP-N 479

Query: 91  GVARKSLLMSAFVQYSAGKYQQAASLGEE 119
               ++ L  A      G+ ++A    +E
Sbjct: 480 HW--RAQLNKAVALLGQGESEEAKKALKE 506


>gi|300776753|ref|ZP_07086611.1| possible aerotolerance-related exported protein [Chryseobacterium
           gleum ATCC 35910]
 gi|300502263|gb|EFK33403.1| possible aerotolerance-related exported protein [Chryseobacterium
           gleum ATCC 35910]
          Length = 247

 Score = 35.1 bits (80), Expect = 9.6,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 35/112 (31%), Gaps = 13/112 (11%)

Query: 63  KAVLFLKEQNFSKAY-EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           +       +++  A  +Y      +         +        Y + KY++A +  E+  
Sbjct: 32  EGNQKFDGKDYEGASSKYMEAIKSN----DKDFTAHYNMGNALYKSKKYEEAKAEFEKAE 87

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
                  +     + +G +Y QM +         +    Y  + +++   S 
Sbjct: 88  KLSQTLPDKTAALHNLGNAYMQMNQ--------PEKAADYYKKALKQDPYSE 131


>gi|225620709|ref|YP_002721967.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
 gi|225215529|gb|ACN84263.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
          Length = 567

 Score = 35.1 bits (80), Expect = 9.6,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 56/144 (38%), Gaps = 28/144 (19%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
           + +Y  E+YE+A+     +++ KA E  +  +                   +Y+  +Y++
Sbjct: 407 NSKYNLELYEEAI-----KDYDKAIELNSNNASA----------YNNRGNSKYNLKQYEE 451

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           +    ++ I   P   N DY YY  G        +     +  +  ++   + +E  TN+
Sbjct: 452 SIKDYDKAIELNPN--NSDY-YYNRG--------NAKRILKQYEEAIKDYDKAIELNTNN 500

Query: 173 --PYVKGARFYVTVGRNQLAAKEV 194
              Y       + +G N+ A  ++
Sbjct: 501 FMAYYNRGLAKLYLGHNEEAYNDL 524


>gi|289581496|ref|YP_003479962.1| hypothetical protein Nmag_1826 [Natrialba magadii ATCC 43099]
 gi|289531049|gb|ADD05400.1| TPR repeat-containing protein [Natrialba magadii ATCC 43099]
          Length = 289

 Score = 35.1 bits (80), Expect = 9.6,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 25/70 (35%), Gaps = 1/70 (1%)

Query: 51  VTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
             D R ++E +  K V   + + + +A     +       +  A  +    A+  +  G+
Sbjct: 99  AEDERLEQEAWVNKGVAHAELEEWDEAIGAHREALDIDAESEHAATAETNLAYALWEFGE 158

Query: 110 YQQAASLGEE 119
             QA    E 
Sbjct: 159 TAQALEHAER 168


>gi|193215316|ref|YP_001996515.1| tetratricopeptide domain-containing protein [Chloroherpeton
           thalassium ATCC 35110]
 gi|193088793|gb|ACF14068.1| Tetratricopeptide TPR_2 repeat protein [Chloroherpeton thalassium
           ATCC 35110]
          Length = 469

 Score = 35.1 bits (80), Expect = 9.6,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 59/197 (29%), Gaps = 40/197 (20%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGK 109
           +      ++  A  + +  N+ +A  ++ +      D+  A  A       A       K
Sbjct: 272 EPDDTDTLFNIATAYEELGNYKEAITFYEKAVASDADYADAWYA------LACCYDMINK 325

Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
           +  A    E  +   P     D + YL   +      D+ Y+       L+   RI+E  
Sbjct: 326 HDFALYAIEHSVKLIP-----DCIEYLQAKA------DIEYNLADFLAALKTYQRILEL- 373

Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
                       V            +    YL+  +   AIP FQ VL          +A
Sbjct: 374 ------DELNAMVWY----------DTASLYLELNKPNKAIPSFQKVLELDPT---HADA 414

Query: 230 MARLVEAYVALALMDEA 246
              L  AY       +A
Sbjct: 415 HFELATAYYLNGQKAQA 431


>gi|218778051|ref|YP_002429369.1| hypothetical protein Dalk_0192 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218759435|gb|ACL01901.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 381

 Score = 35.1 bits (80), Expect = 9.6,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 54/156 (34%), Gaps = 18/156 (11%)

Query: 28  FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN-QCSRD 86
           F I  C L G     +    + S+ D  +     EK   +L+ + +  A   F+    ++
Sbjct: 192 FLITACILSGLASYWT-YTNIHSMDDAWFA----EKGRTYLEMKKYHAAISTFDAALEKN 246

Query: 87  FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
                   ++L          G+   A +  ++ +   P + ++        M++A  I 
Sbjct: 247 ----SANVEALRWRGKTYGETGREDLALADWQKALDLDPNNSDI--------MAHAARIL 294

Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
            +  DQ      +    + V    ++ +V     ++
Sbjct: 295 FLSQDQGQKSRAMTLARKAVNLQPDNVFVLDTLAWI 330


>gi|108759941|ref|YP_630739.1| FHA domain- TPR-repeat-containing protein [Myxococcus xanthus DK
           1622]
 gi|108463821|gb|ABF89006.1| FHA domain/tetratricopeptide repeat protein [Myxococcus xanthus DK
           1622]
          Length = 704

 Score = 35.1 bits (80), Expect = 9.6,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 66/218 (30%), Gaps = 48/218 (22%)

Query: 54  VRYQREVYEKAVLFLKEQNFSKA--------------YEYFNQCSRDFPFAGVARKSLLM 99
              + E+ ++A    +    + A               E F    R              
Sbjct: 475 TDLEAELAKEAQDASRRTRNANARAAEVAKEKRKEFIAEAFTDVERR------------- 521

Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY--------- 150
                ++ G YQ+A    +  + +Y   K+V        ++  ++I              
Sbjct: 522 -----FNGGDYQRAVLECDRVMDKYRADKDVKD----RALALKRLIPQFRRALEDGQKKL 572

Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
           D  + +   + + R  E Y    +       +     QLA+  +  G+  LK+G+  AA 
Sbjct: 573 DSNSLEAAAKPLRRAAELYRQIGFRGSLGNTIDE---QLASSSLAAGQSALKKGDLGAAG 629

Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
             F+  L        A E +  L +    L L    + 
Sbjct: 630 SHFREALRLNPGDGRAREGLENLQKKAEELFLRAYIQR 667


>gi|27469599|gb|AAH42083.1| Transmembrane and tetratricopeptide repeat containing 1 [Homo
           sapiens]
          Length = 774

 Score = 35.1 bits (80), Expect = 9.6,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 52/155 (33%), Gaps = 30/155 (19%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP-YDQRAT 155
           LL + +       + +A    ++ +   P+   V        +S     +     +Q   
Sbjct: 648 LLSAIYS--KQENHDKALDAIDKALQLKPKDPKV--------ISELFFTKGNQLREQNLL 697

Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVG-RNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
               +     V+   +      A+ ++ +G    +             +G+YV+A   ++
Sbjct: 698 DKAFESYRLAVQLNPD-----QAQAWMNMGGIQHI-------------KGKYVSARAYYE 739

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
             L    D++  +E +A+L      L  + E  + 
Sbjct: 740 RALQLVPDSKLLKENLAKLDRLEKRLQEVREKDQT 774


>gi|38454288|ref|NP_942070.1| prolyl 4-hydroxylase subunit alpha-3 precursor [Rattus norvegicus]
 gi|81870816|sp|Q6W3E9|P4HA3_RAT RecName: Full=Prolyl 4-hydroxylase subunit alpha-3; Short=4-PH
           alpha-3; AltName:
           Full=Procollagen-proline,2-oxoglutarate-4-dioxygenase
           subunit alpha-3; Flags: Precursor
 gi|36962768|gb|AAQ87605.1| collagen prolyl 4-hydroxylase alpha III subunit [Rattus norvegicus]
          Length = 544

 Score = 35.1 bits (80), Expect = 9.6,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 32/101 (31%), Gaps = 9/101 (8%)

Query: 40  RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF--PFAGVA---- 93
             S  D+Y           + ++   +     ++  A  +  +    F   +        
Sbjct: 164 GSSITDLYSPRQLFSLTADDCFQVGKVAYDTGDYYHAIPWLEEAVSLFRRSYGEWKTEDE 223

Query: 94  ---RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
                +L   AF  Y  G    A SL  E++   P++K + 
Sbjct: 224 ASLEDALDYLAFACYQVGNVSCALSLSREFLVYSPDNKRMA 264


>gi|332519201|ref|ZP_08395668.1| hypothetical protein LacalDRAFT_0280 [Lacinutrix algicola 5H-3-7-4]
 gi|332045049|gb|EGI81242.1| hypothetical protein LacalDRAFT_0280 [Lacinutrix algicola 5H-3-7-4]
          Length = 591

 Score = 35.1 bits (80), Expect = 9.7,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 49/127 (38%), Gaps = 9/127 (7%)

Query: 61  YEKA-VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Y KA +L  + +  ++A    +   ++     +  ++LL  A +      +++A S   +
Sbjct: 468 YAKADLLAFQNKK-NQAITILSNIIQEHKTETIIPQALLKQAQLFEDKADFEKAKSNYLQ 526

Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
            I+ Y +   +D   + +   Y   +       +  +   +   RI+  + +S Y   +R
Sbjct: 527 IISNYTDGILIDDAIFALAEIYNNQL-------QLPEKAKELYERIIFNHADSIYFVDSR 579

Query: 180 FYVTVGR 186
                 R
Sbjct: 580 KKYRALR 586


>gi|330840818|ref|XP_003292406.1| hypothetical protein DICPUDRAFT_157120 [Dictyostelium purpureum]
 gi|325077362|gb|EGC31080.1| hypothetical protein DICPUDRAFT_157120 [Dictyostelium purpureum]
          Length = 414

 Score = 35.1 bits (80), Expect = 9.7,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 40/105 (38%), Gaps = 10/105 (9%)

Query: 163 SRIVERY---TNSPYVKGARFYVTVGRNQLA-AKEV----EIGRYYLKRGEYVAAIPRFQ 214
             +++++    N   +      +      L   K +     I   Y++  +   A+  + 
Sbjct: 190 REVLQQFVGLPNHEALDELIQRLITLSGGLVNGKTIDQNQAIAENYIRSNQDDKALEIYN 249

Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
           ++L    D   +   +  LV+ Y  L   +   + +S I+E++P 
Sbjct: 250 MLLEK--DTTQSFRTLLGLVQCYTNLNNEEMVNQTLSTIKEKFPN 292


>gi|302770098|ref|XP_002968468.1| hypothetical protein SELMODRAFT_409308 [Selaginella moellendorffii]
 gi|300164112|gb|EFJ30722.1| hypothetical protein SELMODRAFT_409308 [Selaginella moellendorffii]
          Length = 444

 Score = 35.1 bits (80), Expect = 9.7,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 35/83 (42%), Gaps = 6/83 (7%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA-GVARKSLLMSAFV 103
           D    S+ D   ++E+        KE+ + +A E +++     P A   A +++ +    
Sbjct: 124 DFEKGSLPDAVTEKEL---GNELFKEKKYVQAIECYSRSIGLHPTAVAYANRAMALLKIR 180

Query: 104 QYSAGKYQ--QAASLGEEYITQY 124
           +Y   +    +A +L + Y   Y
Sbjct: 181 RYEDAEMDCSEAIALDDRYTKAY 203


>gi|289740799|gb|ADD19147.1| Hsp70/Hsp90 organizing protein-like protein [Glossina morsitans
           morsitans]
          Length = 491

 Score = 35.1 bits (80), Expect = 9.7,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 30/74 (40%), Gaps = 13/74 (17%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQC----SRDFP-FAGVARKSLLMSAFVQYSAGKYQQ 112
            E+ EK    L  + + +A E + +      ++   F+  +      +A+    AGK+ +
Sbjct: 5   NELKEKGNQALNAEKYQEAIEAYTEAILLDDKNHVLFSNRS------AAYA--KAGKFSE 56

Query: 113 AASLGEEYITQYPE 126
           A    E+ I   P 
Sbjct: 57  ALEDAEKTIALNPT 70


>gi|195444024|ref|XP_002069683.1| GK11656 [Drosophila willistoni]
 gi|194165768|gb|EDW80669.1| GK11656 [Drosophila willistoni]
          Length = 464

 Score = 35.1 bits (80), Expect = 9.7,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 27/66 (40%), Gaps = 3/66 (4%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
            +A+  LK +N+  A      C    P      K+LL  A   Y  G+ +++  + +  +
Sbjct: 274 NRAISHLKVKNYLAAISDCEACLEIEPDN---IKALLRLADANYGQGRRRESHDVYQRVL 330

Query: 122 TQYPES 127
              P +
Sbjct: 331 QLDPSN 336


>gi|149199798|ref|ZP_01876828.1| hypothetical protein LNTAR_23609 [Lentisphaera araneosa HTCC2155]
 gi|149137086|gb|EDM25509.1| hypothetical protein LNTAR_23609 [Lentisphaera araneosa HTCC2155]
          Length = 217

 Score = 35.1 bits (80), Expect = 9.7,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 39/121 (32%), Gaps = 19/121 (15%)

Query: 20  YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
            K  L I   IAV   V +     + +  DS  D    +   ++  + L++  F+KA + 
Sbjct: 3   KKITLHISLIIAVLASVTFYVTQGKSI--DSFNDFWQTKN--QQGQVALEKAEFAKAAKL 58

Query: 80  FNQCSRD----FPFAGVARKS----LLMSAFVQY-------SAGKYQQAASLGEEYITQY 124
           F    +     +  A     +       +A   +         G Y  A    +  +   
Sbjct: 59  FEDPLKRGQALYKNAQFEEAAIAFNQAGTAEAYFNSANSLIMMGNYDLAIKSYDRALELK 118

Query: 125 P 125
           P
Sbjct: 119 P 119


>gi|118340532|gb|ABK80582.1| putative SLEI family protein [uncultured marine Nitrospinaceae
           bacterium]
          Length = 249

 Score = 35.1 bits (80), Expect = 9.7,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 4/60 (6%)

Query: 61  YEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           YEK    + +++ F  A   F +  +  P      ++    A   +  G Y++AA   E 
Sbjct: 89  YEKLGQTYSEQKKFDLAIPQFEEAIKRDP---EMLEARYGLAKCYHGMGNYEEAALALER 145


>gi|89112791|gb|ABD60989.1| Hsp70/Hsp90 organizing protein-like protein [Glossina morsitans
           morsitans]
          Length = 491

 Score = 35.1 bits (80), Expect = 9.7,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 30/74 (40%), Gaps = 13/74 (17%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQC----SRDFP-FAGVARKSLLMSAFVQYSAGKYQQ 112
            E+ EK    L  + + +A E + +      ++   F+  +      +A+    AGK+ +
Sbjct: 5   NELKEKGNQALNAEKYQEAIEAYTEAILLDDKNHVLFSNRS------AAYA--KAGKFSE 56

Query: 113 AASLGEEYITQYPE 126
           A    E+ I   P 
Sbjct: 57  ALEDAEKTIALNPT 70


>gi|73997220|ref|XP_543747.2| PREDICTED: similar to ARG99 protein isoform 2 [Canis familiaris]
          Length = 865

 Score = 35.1 bits (80), Expect = 9.7,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 55/212 (25%), Gaps = 51/212 (24%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y  A     +    +A  ++    R +P    A  +L              +A    +  
Sbjct: 470 YNYANFLKDQGRNREAISHYRTALRLYP--RHAS-ALNNLG---TLTRDAAEAKMYYQRA 523

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
           +   P+        + +G        ++   Q   +  +  +   ++          A  
Sbjct: 524 LQLNPQHNR---ALFNLG--------NLLKSQEKKEEAITLLKDSIQYGPE---FADAYS 569

Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF--------------------QLVLANY 220
            +      LA +E    R+      Y A I                       +  +A+Y
Sbjct: 570 SLASL---LAEQE----RFKEAEEIYQAGIKNCPDSSDLHNNYGVFLVDTGSPEKAVAHY 622

Query: 221 SD----AEHAEEAMARLVEAYVALALMDEARE 248
                 +     AM  L   Y +L     A E
Sbjct: 623 QQAIALSPSHHVAMVNLGRLYRSLGDNSAAEE 654


>gi|30262208|ref|NP_844585.1| TPR domain-containing protein [Bacillus anthracis str. Ames]
 gi|47527485|ref|YP_018834.1| TPR domain-containing protein [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49185049|ref|YP_028301.1| TPR domain-containing protein [Bacillus anthracis str. Sterne]
 gi|227814992|ref|YP_002815001.1| TPR domain protein [Bacillus anthracis str. CDC 684]
 gi|254737222|ref|ZP_05194926.1| TPR domain protein [Bacillus anthracis str. Western North America
           USA6153]
 gi|254751538|ref|ZP_05203575.1| TPR domain protein [Bacillus anthracis str. Vollum]
 gi|254759052|ref|ZP_05211079.1| TPR domain protein [Bacillus anthracis str. Australia 94]
 gi|30256839|gb|AAP26071.1| tetratricopeptide repeat protein [Bacillus anthracis str. Ames]
 gi|47502633|gb|AAT31309.1| TPR domain protein [Bacillus anthracis str. 'Ames Ancestor']
 gi|49178976|gb|AAT54352.1| TPR domain protein [Bacillus anthracis str. Sterne]
 gi|227007564|gb|ACP17307.1| tetratricopeptide repeat protein [Bacillus anthracis str. CDC 684]
          Length = 426

 Score = 35.1 bits (80), Expect = 9.7,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 51/158 (32%), Gaps = 17/158 (10%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAF 102
            +  D   D       Y  A    +   + +A + F Q   +         + ++   A 
Sbjct: 126 KLIKDREIDKENNEAAYLLASANFRIGKYQEAVQNFEQALANNAKGIEPYKKDAMRDLAV 185

Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
                 ++++A  +  +  T+   +++   V YL G      ++         +    + 
Sbjct: 186 SHMKMKEFEKAEDVIVKMSTK--TNEDKAIVSYLKGQLSTATVQ--------LEKAESFF 235

Query: 163 SRIV-ERYTNSPYVKG-ARFYVTVGRNQL---AAKEVE 195
              + +   NS Y    +  YV   +  L   A KE+ 
Sbjct: 236 KEAIMQDSKNSIYTIELSNLYVLWNKTNLIDSAKKEMN 273


>gi|21229659|ref|NP_635576.1| hypothetical protein XCC0181 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66766535|ref|YP_241297.1| hypothetical protein XC_0190 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|188989596|ref|YP_001901606.1| hypothetical protein xccb100_0200 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|21111140|gb|AAM39500.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66571867|gb|AAY47277.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167731356|emb|CAP49531.1| hypothetical protein xcc-b100_0200 [Xanthomonas campestris pv.
           campestris]
          Length = 690

 Score = 35.1 bits (80), Expect = 9.7,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 61/198 (30%), Gaps = 37/198 (18%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM--SAFVQYSAGKYQQ 112
            + + +    V+ ++     +A     + +   P       + +M    F       +  
Sbjct: 132 EHPQLLAVDGVVEMRRGQSDRALSLLTRAAEQLP-----DDARVMFALGFAYLQKEHFAF 186

Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
           A    E  +   P            G +    I  +   Q      L  M  ++ +    
Sbjct: 187 AERAFERVVELNPP-----------GTALRAFIAQLAQRQGRLDDALSAMQGVLAQ-PGG 234

Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
                          +LA  E+E     L+ G    A+   +L LA++         +  
Sbjct: 235 D---------IPAMRRLAG-EME-----LQAGRPDQAVAHLRLALAHWP---ADRRTLHA 276

Query: 233 LVEAYVALALMDEAREVV 250
           L+ A+  L  +D+AR+ +
Sbjct: 277 LLSAWERLGAVDDARDTL 294


>gi|42524943|ref|NP_970323.1| hypothetical protein Bd3599 [Bdellovibrio bacteriovorus HD100]
 gi|39577154|emb|CAE80977.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100]
          Length = 513

 Score = 35.1 bits (80), Expect = 9.7,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 25/55 (45%), Gaps = 3/55 (5%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           A    + +NF +A + + +  +D P     R S +   +  + + +++ A S  +
Sbjct: 216 ARAHYQGKNFKEAIDLYREIPKDHP--AY-RDSQIELTWSLFRSAQFRSAMSTIQ 267


>gi|113475613|ref|YP_721674.1| hypothetical protein Tery_1947 [Trichodesmium erythraeum IMS101]
 gi|110166661|gb|ABG51201.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101]
          Length = 564

 Score = 35.1 bits (80), Expect = 9.7,   Method: Composition-based stats.
 Identities = 15/111 (13%), Positives = 36/111 (32%), Gaps = 14/111 (12%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
           Y++     +   +  A  Y+    +  P    A    L  A       KY+QA    +  
Sbjct: 42  YDRGNRLYEMGRYESAIPYYENAVKIKP--DWAI-GWLKLAEALSKLQKYEQAVEAYKRS 98

Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
           ++   ++ +  +  Y V +S  +            +  +    + ++   N
Sbjct: 99  LSLK-QNAHQAWHSYGVVLSNLKQ----------YEQAIACFDKAIKINPN 138


>gi|313887320|ref|ZP_07821011.1| tetratricopeptide repeat protein [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|312923239|gb|EFR34057.1| tetratricopeptide repeat protein [Porphyromonas asaccharolytica
           PR426713P-I]
          Length = 567

 Score = 35.1 bits (80), Expect = 9.8,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 65/192 (33%), Gaps = 38/192 (19%)

Query: 71  QNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
            ++S A +Y ++     P  +  +  K+ +++          ++A +   +Y++  P+  
Sbjct: 342 GDYSSALKYIDEAISLDPTDYTYIYTKAQMLT-----EDDNLRRALAESNKYLSLVPDDP 396

Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
           +    YY         I+    D +     +   S+++E   +  Y+             
Sbjct: 397 DG---YYQRA-----QIKSKSQDLQG---AIDDYSKVIEL--SDTYLWAYIKR------- 436

Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
                      Y   G   AA   ++ V+    + +  +     +  AY +L   ++A  
Sbjct: 437 --------ADRYTALGRKDAATADYRKVIEILQEQDATD---MTMAYAYQSLGEQEQALA 485

Query: 249 VVSLIQERYPQG 260
            ++   E  P  
Sbjct: 486 TIAKCIEGAPDN 497


>gi|300783206|ref|YP_003763497.1| ATPase [Amycolatopsis mediterranei U32]
 gi|299792720|gb|ADJ43095.1| predicted ATPase containing TPR repeat domain [Amycolatopsis
           mediterranei U32]
          Length = 998

 Score = 35.1 bits (80), Expect = 9.8,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 35/87 (40%), Gaps = 7/87 (8%)

Query: 43  SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF-----PFAGVARKSL 97
           +RD+YL+    +     + E   +  +  NF  A  Y ++  + +     P    A  + 
Sbjct: 695 ARDLYLELGNRLGEADVLNEAGRVQQEVSNFIGATAYLDRAHQLYEELHNPLGVAATFAQ 754

Query: 98  LMSAFVQYSAGKYQQAASLGEEYITQY 124
           L  A VQY +   + A +  E  +  Y
Sbjct: 755 L--ARVQYRSCDLEAARTNAERSLDLY 779


>gi|270293841|ref|ZP_06200043.1| TPR-domain-containing protein [Bacteroides sp. D20]
 gi|270275308|gb|EFA21168.1| TPR-domain-containing protein [Bacteroides sp. D20]
          Length = 454

 Score = 35.1 bits (80), Expect = 9.8,   Method: Composition-based stats.
 Identities = 42/293 (14%), Positives = 82/293 (27%), Gaps = 69/293 (23%)

Query: 16  AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLD---------SVTDVRYQREVYEKAVL 66
            Y + K  +++ FS     L        ++   +            +      +Y+K   
Sbjct: 2   IYCMRKLFISLCFSACCSLLAAQTTNPIQEAMANYDYETALMLIDQETPTVPLLYQKGKA 61

Query: 67  FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
                N  +A   F +         +  ++ + +A    S  KY +A    +  +   P+
Sbjct: 62  LKGLGNNLEALSVFQEVVARD---SLNPRAYIEAAECCKSLAKYSEALDYYQNALHINPD 118

Query: 127 SKNV------------------------------DYVYYLVGMSYAQMIRDVPYDQRATK 156
           +K                                 YV +L   S  Q      YD     
Sbjct: 119 NKYARIQYISLLMNMKRYRESLKESNLLAERDSSAYVLHLRAESMGQ-----VYDNTEIM 173

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI------------------GR 198
            ++     I +RY N  Y+  A+              + I                   +
Sbjct: 174 HVIDAYLDIQKRYPN-DYLSAAKLGNIYVAGHQYEDAISITEKYRSIDSTNVLVNRINAQ 232

Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
            Y    +Y  AI R++ +L    D+    +       +Y AL     A +++ 
Sbjct: 233 AYCLNKDYPKAIERYEQLLQE-KDSSF--QTCFYAGISYYALEDFYPAHDLLE 282


>gi|238026060|ref|YP_002910291.1| TPR repeat protein [Burkholderia glumae BGR1]
 gi|237875254|gb|ACR27587.1| TPR repeat protein [Burkholderia glumae BGR1]
          Length = 214

 Score = 35.1 bits (80), Expect = 9.8,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 35/100 (35%), Gaps = 13/100 (13%)

Query: 22  FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
           FA      +A   + G   Q S        T   + + + E A    K  +  KA   + 
Sbjct: 6   FAKLSVVVMACGVIAGCATQPS-----APPTPEAFNKSL-EDADAVAKAGDQDKAIGLYQ 59

Query: 82  QCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
           Q ++  P      AR + +     Q+  G Y QA    +E
Sbjct: 60  QLAKSDPTREEPWARIAQI-----QFQQGHYGQAIVAAQE 94


>gi|218960878|ref|YP_001740653.1| hypothetical protein; putative signal peptide [Candidatus
           Cloacamonas acidaminovorans]
 gi|167729535|emb|CAO80447.1| hypothetical protein; putative signal peptide [Candidatus
           Cloacamonas acidaminovorans]
          Length = 475

 Score = 35.1 bits (80), Expect = 9.8,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 52/141 (36%), Gaps = 13/141 (9%)

Query: 64  AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEEYI 121
           A   ++++N+  A  +F   + D   +   R + +    A      G    + S  +  I
Sbjct: 79  AEAAVEKKNWPLAIRFFKLANSD---SANLRLAEIYRDLAMEAEKEGNRIVSKSYLDAII 135

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
            + PES  +  V Y   + Y   ++         +       R+ + Y NSPY   AR Y
Sbjct: 136 REVPESPLIPEVLYRR-IGYFLDVK------ADNESAWNDYMRLFDNYPNSPYEILARNY 188

Query: 182 -VTVGRNQLAAKEVEIGRYYL 201
            +     +L   EV   + Y 
Sbjct: 189 VMRFIPGKLKYAEVLTEQGYY 209


>gi|158424550|ref|YP_001525842.1| TPR repeat-containing protein [Azorhizobium caulinodans ORS 571]
 gi|158331439|dbj|BAF88924.1| TPR repeat protein [Azorhizobium caulinodans ORS 571]
          Length = 679

 Score = 35.1 bits (80), Expect = 9.8,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 57/190 (30%), Gaps = 34/190 (17%)

Query: 57  QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
            R +  +A    +     +A E     ++  P    A +   M AF     G+ ++A   
Sbjct: 25  PRALLGQASALHRAGRMDEAIEACRAAAKVAPGFLDAHR---MLAFALLQVGRAKEAVRA 81

Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
            ++     P   N          S+  +   +   Q      L       +   N   + 
Sbjct: 82  AQKARDLAPRDPN----------SHLLVGAGL-LGQGDAAKALAAFDEAAKLAPN---LL 127

Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
            A        N LAA            G + AAI R+   LA    +    EA+      
Sbjct: 128 EAH---FQAGNALAA-----------LGRFPAAIERYNRALALDPRS---VEALTNRATT 170

Query: 237 YVALALMDEA 246
           Y  LA   EA
Sbjct: 171 YARLARHAEA 180


>gi|157108588|ref|XP_001650298.1| protein phosphatase-5 [Aedes aegypti]
 gi|108879263|gb|EAT43488.1| protein phosphatase-5 [Aedes aegypti]
          Length = 512

 Score = 35.1 bits (80), Expect = 9.8,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 49/166 (29%), Gaps = 34/166 (20%)

Query: 34  FLVGWERQSSRDVYLDSV-----TDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDF 87
            + G    ++ +   D+       +     E+  +A    K ++  KA + +      D 
Sbjct: 14  GVTGANPTANVETPPDAANHVNDANKARAEELKSQANEHFKNKDNDKAIQLYTEAIELD- 72

Query: 88  PFAG---VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYA 142
             +     A +S     F       +  A +   + I   P      Y+  YY    ++ 
Sbjct: 73  -GSNAILYANRS-----FAYLRQEAFGYALNDAVQAIKCNPN-----YLKGYYRRAGAHM 121

Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
            +           KL L  +  + +R  N      A+   T     
Sbjct: 122 AL--------GKYKLALADLELVAKRCPNDK---DAQLKYTECNKI 156


>gi|94268542|ref|ZP_01291208.1| TPR repeat [delta proteobacterium MLMS-1]
 gi|93451563|gb|EAT02372.1| TPR repeat [delta proteobacterium MLMS-1]
          Length = 538

 Score = 35.1 bits (80), Expect = 9.8,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 35/95 (36%), Gaps = 14/95 (14%)

Query: 97  LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
           LL  A   Y  G +++A    ++ + + P S+        +G++     R+ P       
Sbjct: 362 LLEEARAAYRLGDHEEAWRAYQQALEKSPRSREAA-----MGLATVAQSRNDPL------ 410

Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
             L    +I+ER         A+  +      LAA
Sbjct: 411 TALHLYQQILERDPGDR---QAQQGLVSLAPALAA 442


>gi|78778123|ref|YP_394438.1| Sel1 repeat-containing protein [Sulfurimonas denitrificans DSM
           1251]
 gi|78498663|gb|ABB45203.1| Sel1-like repeat [Sulfurimonas denitrificans DSM 1251]
          Length = 228

 Score = 35.1 bits (80), Expect = 9.8,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 37/111 (33%), Gaps = 17/111 (15%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG----KYQQAASLG 117
           +KA      ++F  A++ + Q S           ++    ++  +A       ++A SL 
Sbjct: 3   KKAHDAYNNKDFESAFKLYTQLSN-----EGNADAMASLGYMYQNAQGCDIDEKKALSLY 57

Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
           E             Y  Y +G+ Y   +  V +DQ        +      R
Sbjct: 58  ERAAEL-----KQPYALYNLGILYMNGLGGVEHDQ---FKAHDFFMEAATR 100


>gi|326430254|gb|EGD75824.1| tetratricopeptide repeat protein 30 [Salpingoeca sp. ATCC 50818]
          Length = 612

 Score = 35.1 bits (80), Expect = 9.9,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 7/71 (9%)

Query: 49  DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
             V D +Y   +Y      +KE+ + +A +       + P +   + +L + A+  +   
Sbjct: 4   PRVADGKYTETIYG----MIKEKQYQQAAKILQVQLHNHPNS---QAALSLLAYCYFHMQ 56

Query: 109 KYQQAASLGEE 119
            +  AA   E 
Sbjct: 57  DFYGAAECYER 67


>gi|302774450|ref|XP_002970642.1| hypothetical protein SELMODRAFT_411379 [Selaginella moellendorffii]
 gi|300162158|gb|EFJ28772.1| hypothetical protein SELMODRAFT_411379 [Selaginella moellendorffii]
          Length = 444

 Score = 35.1 bits (80), Expect = 9.9,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 35/83 (42%), Gaps = 6/83 (7%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA-GVARKSLLMSAFV 103
           D    S+ D   ++E+        KE+ + +A E +++     P A   A +++ +    
Sbjct: 124 DFEKGSLPDAVTEKEL---GNELFKEKKYVQAIECYSRSIGLHPTAVAYANRAMALLKIR 180

Query: 104 QYSAGKYQ--QAASLGEEYITQY 124
           +Y   +    +A +L + Y   Y
Sbjct: 181 RYEDAEMDCSEAIALDDRYTKAY 203


>gi|260841675|ref|XP_002614036.1| hypothetical protein BRAFLDRAFT_113732 [Branchiostoma floridae]
 gi|229299426|gb|EEN70045.1| hypothetical protein BRAFLDRAFT_113732 [Branchiostoma floridae]
          Length = 896

 Score = 35.1 bits (80), Expect = 9.9,   Method: Composition-based stats.
 Identities = 31/234 (13%), Positives = 67/234 (28%), Gaps = 59/234 (25%)

Query: 55  RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQ 112
           +  R +  +A L      +  A +   +  R  P  +      +++         G  ++
Sbjct: 153 KPLRGLMGEANLRFARGKYDDAIKMCMEVIRQVPHCYEPFQTAAMV-----YEEKGDMER 207

Query: 113 ----AASLGEEYITQYPESK--------------NVDYVY--YLVGMSYAQMIRDVPYDQ 152
               A           P+                N+      Y   + Y      + ++Q
Sbjct: 208 SLQFALIAA----HLNPQDPEEWVKLAEVSLEQNNISQAITCYKKALRYDPNNIGILWEQ 263

Query: 153 -------RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
                  +  +  L+   +I++        K    Y+ + R+          + Y   GE
Sbjct: 264 ANLLEQTQEPRKALEGYQQILKLLPE----KEGNKYMDLMRDM--------SKTYHATGE 311

Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE--RY 257
             AAI   Q     +       E +  L E YV +      ++   +++    Y
Sbjct: 312 TEAAIETIQAAFTKHP-TLVTFEDVNMLTELYVTM------KQYRHVLEAMSNY 358


>gi|257060934|ref|YP_003138822.1| hypothetical protein Cyan8802_3148 [Cyanothece sp. PCC 8802]
 gi|256591100|gb|ACV01987.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8802]
          Length = 249

 Score = 35.1 bits (80), Expect = 9.9,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 47/139 (33%), Gaps = 16/139 (11%)

Query: 59  EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           E+ E+ +   ++ ++  A   F +  ++ P       +     F   + GK+  A +   
Sbjct: 62  ELVEQGIEKSRQGDYQGAIADFTEALKNNPND---INAYYNRGFAYSNLGKFDLALADFS 118

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG- 177
           + +        +   Y   G  Y Q+  D        K  +      ++   N  +    
Sbjct: 119 QSLIL---DPKMVEAYVNRGNVYLQLGDD--------KEAIANYLEALKLNPNDAFAHNN 167

Query: 178 -ARFYVTVGRNQLAAKEVE 195
               Y+ +G+  LA K+  
Sbjct: 168 LGLAYLNLGQADLAQKDFS 186


>gi|94501022|ref|ZP_01307546.1| hypothetical protein RED65_05184 [Oceanobacter sp. RED65]
 gi|94426769|gb|EAT11753.1| hypothetical protein RED65_05184 [Oceanobacter sp. RED65]
          Length = 246

 Score = 35.1 bits (80), Expect = 9.9,   Method: Composition-based stats.
 Identities = 16/119 (13%), Positives = 39/119 (32%), Gaps = 14/119 (11%)

Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
           R     +      +E +  S       +++              G+ Y  +G    A   
Sbjct: 139 RKFDEAISEFKSFLEAHPKSSLAVNGYYWL--------------GQVYYNKGMLDEARKA 184

Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
           F  V+  + D +   ++  +L      L    +++ ++  I   +     AR+ +  +K
Sbjct: 185 FAFVVNQFPDHQKTLDSKYKLAVVLHRLGDKAQSKPILEAIVSDHKGTSTARFAQQYLK 243


>gi|89075009|ref|ZP_01161454.1| hypothetical Zn-dependent protease [Photobacterium sp. SKA34]
 gi|89049248|gb|EAR54812.1| hypothetical Zn-dependent protease [Photobacterium sp. SKA34]
          Length = 485

 Score = 35.1 bits (80), Expect = 9.9,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 32/84 (38%), Gaps = 5/84 (5%)

Query: 48  LDSVTDVRYQREVYEKAVLFL--KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
           LD +         Y  A   L   ++ + +A        ++ P + + R   +  A    
Sbjct: 331 LDPLIAGEPDNMFYIDAATDLDLNQKQYERAISRLINAQKNNPDSSILR---INLANAYL 387

Query: 106 SAGKYQQAASLGEEYITQYPESKN 129
            AGKYQ++  +   Y   +P+  N
Sbjct: 388 EAGKYQKSIQILNRYTYDHPDDIN 411


>gi|330752297|emb|CBL87252.1| protein containing tetratricopeptide repeat domain [uncultured
           Sphingobacteria bacterium]
          Length = 1018

 Score = 35.1 bits (80), Expect = 9.9,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 65/199 (32%), Gaps = 32/199 (16%)

Query: 50  SVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
              +   +  +Y+  + F    +N+ K+ +   +    +P +                 G
Sbjct: 691 EKANAAIEEALYDLGIAFRGAVKNYQKSVDALEKLVVRYPQSEKILDVYYYLYLSYSDLG 750

Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
              +A       I ++P+S+            +A+ ++D  Y        L+  +  VE 
Sbjct: 751 NSNKAEYYKNRIIQEFPDSR------------FAKALQDPNY-----FASLKDENNSVEL 793

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY--VAA------------IPRFQ 214
           Y ++ Y           +N++A  E   G+    + ++  ++A            I   Q
Sbjct: 794 YYDNTYEMFDNGKYINVKNRIAESETLFGKENAMKAKFSLLSAMVTGAEEGKEGYIKSLQ 853

Query: 215 LVLANYSDAEHAEEAMARL 233
            V+  Y D      A   +
Sbjct: 854 DVITRYPDTPQQIRAQEIM 872


>gi|324111859|gb|EGC05839.1| cellulose synthase operon protein C [Escherichia fergusonii B253]
          Length = 1157

 Score = 35.1 bits (80), Expect = 9.9,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 64/210 (30%), Gaps = 30/210 (14%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
           ++    LK  N  +A   F Q          A   L   A        Y  A    ++ +
Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412

Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
                + N      + G++           Q++ +    Y++ +      S  +      
Sbjct: 413 RMDSGNTNA-----VRGLANIYR-------QQSPEKAEAYIASLSASQRRS--IDDIERS 458

Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYV--AAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
           +    ++LA +          +G++   AA+ R +L L     +        RL +    
Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWGQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507

Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
                +A  ++  + ++ P      Y   L
Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537


>gi|300867781|ref|ZP_07112424.1| putative MCP methyltransferase, CheR-type with Tpr repeats
           [Oscillatoria sp. PCC 6506]
 gi|300334198|emb|CBN57596.1| putative MCP methyltransferase, CheR-type with Tpr repeats
           [Oscillatoria sp. PCC 6506]
          Length = 578

 Score = 35.1 bits (80), Expect = 9.9,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 3/48 (6%)

Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
           K   Y  AI + + V+  Y    H  +A   L E Y  L   ++A   
Sbjct: 424 KNKTYFEAIKKAEQVIDLYP---HNFKAYYLLAEIYANLGKYEQAINY 468


>gi|297268403|ref|XP_001094093.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Macaca
           mulatta]
          Length = 1298

 Score = 35.1 bits (80), Expect = 9.9,   Method: Composition-based stats.
 Identities = 40/273 (14%), Positives = 99/273 (36%), Gaps = 33/273 (12%)

Query: 3   AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
           A L RA    E   +     ++T  +++A  +    E   +  +Y + + +     + Y 
Sbjct: 601 ASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYL 660

Query: 63  K-AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           +   +   + NF +A ++F +    ++D P    +    L  A       ++       E
Sbjct: 661 RLGAMARDKGNFYEASDWFKEALQINQDHP-DAWSLIGNLHLA-----KQEWGPGQKKFE 714

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ----RATKLMLQYMSRIVERYTNSPY 174
             + Q P +++  Y    +G  + Q +     D+    R     L    +++     + Y
Sbjct: 715 RILKQ-PSTQSDTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLY 773

Query: 175 VKGA-------RFYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVL 217
                      + Y    R+  A  +E         + +   Y+++ +Y++A+  ++  L
Sbjct: 774 AANGIGAVLAHKGYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCL 833

Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
             +   ++ E  +  L  A      + E ++ +
Sbjct: 834 RKFYKHQNTEVVLY-LARALFKCGKLQECKQTL 865


>gi|282897381|ref|ZP_06305383.1| TPR repeat protein [Raphidiopsis brookii D9]
 gi|281198033|gb|EFA72927.1| TPR repeat protein [Raphidiopsis brookii D9]
          Length = 258

 Score = 35.1 bits (80), Expect = 9.9,   Method: Composition-based stats.
 Identities = 12/102 (11%), Positives = 28/102 (27%), Gaps = 11/102 (10%)

Query: 61  YEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           Y +         + +A   +N+     P  F        +          +YQ+  +   
Sbjct: 136 YNRGNALSALGRYEEAIRSYNESIVIDPNKFEAW-----INKGIALTKLQRYQEGLASYN 190

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
           + I+  P        YY        + + V     +    ++
Sbjct: 191 QAISINPNFPT---AYYNKA-CNYALQKQVNLAVESLAKAIK 228


>gi|237840065|ref|XP_002369330.1| Hsc70/Hsp90-organizing protein, putative [Toxoplasma gondii ME49]
 gi|211966994|gb|EEB02190.1| Hsc70/Hsp90-organizing protein, putative [Toxoplasma gondii ME49]
          Length = 565

 Score = 35.1 bits (80), Expect = 9.9,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 53/180 (29%), Gaps = 44/180 (24%)

Query: 49  DSVTDVRYQREVY--EKAVLFLKEQNFSKA-YEYFNQCSRDFP----FAGVARKSLLMSA 101
           D   +      +Y   KA ++++  ++ K   E      + +     F+ VA K     A
Sbjct: 268 DEAIEKNPNEILYLNNKAAVYMELGDYDKCLAECQKALDKRYECKADFSKVA-KVYCRMA 326

Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
             +  +G Y  A                     Y   +             R T+  L  
Sbjct: 327 ACKTRSGDYSGAI------------------AMYEKALCEDNN--------RMTRNALNE 360

Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
           + +          +K  +         LA +  E G  Y K+G+Y AA   +   +    
Sbjct: 361 VKK----------LKEKKEKEDYINPALAEQHREKGNEYFKQGDYPAAKKEYDEAIRRNP 410


>gi|254183905|ref|ZP_04890496.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1655]
 gi|184214437|gb|EDU11480.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1655]
          Length = 837

 Score = 35.1 bits (80), Expect = 9.9,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 10/73 (13%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           D    S  DVR    +Y K       +  ++A ++    ++ +P +GVA KS     F  
Sbjct: 229 DARKPSEQDVRRFATLYNK-------RRMAEAIKFARALAQRYPGSGVAWKS---LGFAL 278

Query: 105 YSAGKYQQAASLG 117
           +  G+Y  A    
Sbjct: 279 HRDGQYGPACEAL 291


>gi|167740689|ref|ZP_02413463.1| putative TPR domain protein [Burkholderia pseudomallei 14]
          Length = 629

 Score = 35.1 bits (80), Expect = 9.9,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 10/73 (13%)

Query: 45  DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
           D    S  DVR    +Y K       +  ++A ++    ++ +P +GVA KS     F  
Sbjct: 21  DARKPSEQDVRRFATLYNK-------RRMAEAIKFARALAQRYPGSGVAWKS---LGFAL 70

Query: 105 YSAGKYQQAASLG 117
           +  G+Y  A    
Sbjct: 71  HRDGQYGPACEAL 83


>gi|197124704|ref|YP_002136655.1| MJ0042 family finger-like protein [Anaeromyxobacter sp. K]
 gi|196174553|gb|ACG75526.1| MJ0042 family finger-like protein [Anaeromyxobacter sp. K]
          Length = 382

 Score = 35.1 bits (80), Expect = 9.9,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 25/82 (30%), Gaps = 3/82 (3%)

Query: 52  TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           TD      +  + + +L    +  A   F    R  P       + L  A      G   
Sbjct: 295 TDPENVAALTGQGLCYLDLARYPSAESAFQAALRVEPENP---DATLGLAETYRWQGNDA 351

Query: 112 QAASLGEEYITQYPESKNVDYV 133
           +A    E Y+  +P+ +     
Sbjct: 352 EAIRYYERYLAHHPDGEEAAVA 373


>gi|145524453|ref|XP_001448054.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124415587|emb|CAK80657.1| unnamed protein product [Paramecium tetraurelia]
          Length = 581

 Score = 35.1 bits (80), Expect = 9.9,   Method: Composition-based stats.
 Identities = 12/119 (10%), Positives = 36/119 (30%), Gaps = 21/119 (17%)

Query: 58  REVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
            ++ E+       ++++KA   + +      + P      ++    A++     + + A 
Sbjct: 13  NQLKEEGNTEFLNRDYNKAINLYTKALYLEEN-PI-CYNNRAQ---AYLY--NNELELAL 65

Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
               + +   P         Y+   +       V Y     +  ++ +  I      S 
Sbjct: 66  QDCNKALQLNPN--------YVKATTNKAQ---VLYQMGYLQQAIECLQGINNHSPESQ 113


>gi|118474870|ref|YP_892652.1| TPR repeat-containing protein [Campylobacter fetus subsp. fetus
           82-40]
 gi|261885574|ref|ZP_06009613.1| TPR repeat-containing protein [Campylobacter fetus subsp.
           venerealis str. Azul-94]
 gi|118414096|gb|ABK82516.1| TPR repeat-containing protein [Campylobacter fetus subsp. fetus
           82-40]
          Length = 293

 Score = 35.1 bits (80), Expect = 9.9,   Method: Composition-based stats.
 Identities = 15/123 (12%), Positives = 43/123 (34%), Gaps = 17/123 (13%)

Query: 62  EKAVLFLKEQNFSKAYEYFNQC-SRDF--PFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
           + A      + + KA E +     +     ++        M   ++Y+   Y+ A    +
Sbjct: 184 KDADTSYNNKEYLKASEAYAFLVKKKHKPAYSNF------MLGEIEYTNKNYKDAIPYYQ 237

Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
           + +    +   +  + Y   +S+ ++          TK   ++ + + + Y +S   K +
Sbjct: 238 KSVELSQKGTYMPKLLYHTAISFDKI--------GDTKNANKFYNALRQAYPDSKEAKAS 289

Query: 179 RFY 181
              
Sbjct: 290 PVR 292


>gi|91228733|ref|ZP_01262645.1| hypothetical protein V12G01_12525 [Vibrio alginolyticus 12G01]
 gi|91187721|gb|EAS74041.1| hypothetical protein V12G01_12525 [Vibrio alginolyticus 12G01]
          Length = 760

 Score = 35.1 bits (80), Expect = 9.9,   Method: Composition-based stats.
 Identities = 26/205 (12%), Positives = 67/205 (32%), Gaps = 43/205 (20%)

Query: 53  DVRYQREVYEKAVLFLKEQNFSKA-YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
           D+     +Y +A   L +     A  +Y+      +  +     +L    +  + + +  
Sbjct: 189 DIIKAENLYSEAKTMLDDSRSELALIDYYTAVGEFYLNSKKYNLALSELLYGYWQSIESN 248

Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR---IVER 168
             A L +                        +++  +  ++R     ++Y+S+     + 
Sbjct: 249 SGARLAK----------------------VNRLLARLFQERRVYDKAIEYLSQAADFYDS 286

Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
           Y +SP +      +              G  Y  +G++  A+  +  VL + S +++   
Sbjct: 287 YPSSPILADVLEQM--------------GDIYFYQGKFNLALVHYFNVLDHESTSKNINR 332

Query: 229 AMAR---LVEAYVALALMDEAREVV 250
            +     L   Y+ L     A + +
Sbjct: 333 IIKIRLSLAATYLQLYNYALAEQYL 357


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.313    0.168    0.529 

Lambda     K      H
   0.267   0.0516    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,891,563,567
Number of Sequences: 14124377
Number of extensions: 317951903
Number of successful extensions: 1209211
Number of sequences better than 10.0: 10000
Number of HSP's better than 10.0 without gapping: 3753
Number of HSP's successfully gapped in prelim test: 9310
Number of HSP's that attempted gapping in prelim test: 1140199
Number of HSP's gapped (non-prelim): 48717
length of query: 271
length of database: 4,842,793,630
effective HSP length: 137
effective length of query: 134
effective length of database: 2,907,753,981
effective search space: 389639033454
effective search space used: 389639033454
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (20.6 bits)
S2: 81 (35.5 bits)